Oligonucleotide Primers Used for PCR Amplification
| Designation | Sequence (5′ to 3′) | Specific for |
| Exon 1 primers | ||
| DRB1L | CCTGTTCTCCAGCATGGTGTG | Generic |
| K3 | GTGACACTGATGGTGCTGAGCTGG | Generic |
| R1 | GCATCTCTGACCAGCAACTGATGA | Generic |
| Exon 2 primers | ||
| K5 | CTCTCCGCGGCACTAGGAACCTCTC | Generic |
| K8 | TCCGGGTGTTGAAGTGCTCTGC | Saoe-DRB1*03 |
| K9 | CACCTGGCCCCGCTTCTGCTC | Generic |
| K10 | AAGCGCAAGTTCTCCTCCTGATTA | Caja-DRB1*03 |
| K13 | TCTCCCAGTCCCGTAGTTGTGTC | Generic |
| K50 | CCAGCGCGATTACGCAC | Saoe-DRB3*05 |
| K60 | CACCGCGGCCCGCTCGTC | Camo-DRB*W17 |
| K61 | GCTCTCACCAACCCCGTAGT | Ceap-DRB*W13 |
| PefuL2 | AACCCCGTAGTTGTGTCTGCA | Generic |
| P9 | CGCTGTCTGCTCCCTCTTCA | Gamo-DRB*W501 |
| Primers used for amplification of the hybridization probe | ||
| Alu1 | GGGCGGATCACGAGGTCAGG | Generic |
| Alu2 | CAGTGGCGGGATCTCGGCTC | Generic |
| Primers flanking Alu50J, Alu62Sc, andAlu63Sc | ||
| A50-I | ATTTCATAGGTTCCCCCATCA | Generic |
| A50-II | CATGTCTGCTTATCTCTTCCTC | Saoe-DRB |
| A50-III | GCGACATCTGCTTACCTCTCTC | Camo-DRB |
| A50-IV | CACACTCTCCCCCTTCTC | Saoe-DRB |
| A50-V | CCAACCTCTCTGTCTTAGTC | Saoe-DRB |
| A50-VI | GAATAGAGCCCAGTAAACAG | Camo-DRB |
| A50-VII | AGGGTTCTGGGTTCTGATTG | Camo-DRB |
| ASc-I | ATCAAAATGAAAGGGTGCTG | Saoe-DRB |
| ASc-II | TGGAGCTTCAGCCCCTTC | Saoe-DRB |
| ASc-III | CCCAGAACCCTGGTTTATTC | Generic |
| ASc-IV | CTGTTTACTGGGCTCTATTC | Camo-DRB |
| ASc-V | ACTGTGGTGTAACTTCCTTGAG | Saoe-DRB |
| ASc-VI | TGGTGTGTGACTTCCATGAGA | Camo-DRB |