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Table 2.
Methods used in this study
Method
Source
GitHub/GitLab
scGeneFit
Dumitrascu et al. 2021
https://github.com/solevillar/scGeneFit-python
G-PC
Hasanaj et al. 2022
https://github.com/euxhenh/phenotype-cover
mRMR
Peng et al. 2005
https://github.com/smazzanti/mrmr
RankCorr
Vargo and Gilbert 2020
https://github.com/ahsv/RankCorr
Spapros
Kuemmerle et al. 2024
https://github.com/theislab/spapros
SMaSH
Nelson et al. 2022
https://gitlab.com/cvejic-group/smash
Mutual Inf.
Pedregosa et al. 2011
https://github.com/scikit-learn/scikit-learn
DE genes
Wolf et al. 2018
https://github.com/scverse/scanpy