Table 3.

Single nucleotide and small insertion or deletion variant findings

Individual IDSexAge at testingAge at onsetFHx of CAGeneDiseaseInheritanceGenomic variant (hg38)HGVScHGVSpZygosityConsequenceClassificationClinical presentation
P074F5739ANO10SCAR10ARChr3:43574873T>Cc.1163-9A>GHomSplice acceptorPCA
P109M61ND+CACNA1GSCA42ADChr17:50617560G>Ac.5144G>Ap.(Arg1715His)HetMissensePCA
P018M3026HEXATay Sachs diseaseARChr15:72350518C>T

Chr15:72375740C>T
c.805G>A

c.233G>A
p.(Gly269Ser)

p.(Trp78*)
Het

Het
Missense

Stop gained
P

P
CA and reduced muscle power
P049F5717+PNPT1SCA25ADChr2:55643216G>Cc.2014-3C>GHetSplice acceptorLPCA
P096M7568SPG7SPG7ARChr16:89546737C>Tc.1529C>Tp.(Ala510Val)HomMissensePCA, spasticity and osteoarthritis
P020M68NDSTUB1SCA48ADChr16:681504CGAA>Cc.433_435delp.(Lys145del)HetInframe deletionLPCA, akathisia and hyperreflexia
P059M7672+TTBK2SCA11ADChr15:42777132ATC>Ac.1306_1307delp.(Asp436Tyrfs*14)HetFrameshiftPCA, laryngeal tremor, sensorimotor neuropathy and dementia

[i] M, male; F, female; ND, no data available; FHx, family history; CA, cerebellar ataxia; −, absent; +, present; SCAR10, autosomal recessive spinocerebellar ataxia type 10; SPG7, spastic paraplegia 7; AD, autosomal dominant; AR, autosomal recessive; Het, heterozygous; Hom, homozygous; P, pathogenic; LP, likely pathogenic.

[ii] Transcripts: ANO10, NM_018075.5; CACNA1G, NM_018896.5; HEXA, NM_000520.6; PNPT1, NM_033109.5; SPG7, NM_003119.4; STUB1, NM_005861.4; TTBK2, NM_173500.4.