Table 2.

Annotation statistics of Ygua and Ymac MSY and pseudoautosomal region (PAR)

MSY (23.5 Mb-end)PAR (1–23.5 Mb)
YguaYmacYguaYmac
Total genes210179949943
Single exon16 (7.6%)14 (7.8%)60 (6.3%)57 (6.0%)
Multiexon194 (92.4%)165 (92.2%)889 (93.7%)886 (94.0%)
Map to Pfam161 (76.7%)140 (78.2%)770 (81.1%)784 (83.1%)
Map to RefSeq/Swiss-Prot199 (94.8%)171 (95.5%)924 (97.4%)919 (97.5%)
With RNA support57 (27.1%)24 (13.4%)108 (11.4%)84 (8.9%)
Without start codon35 (16.7%)15 (8.4%)50 (5.3%)50 (5.3%)
Pseudo with RNA16 (7.6%)18 (10.1%)64 (6.7%)60 (6.4%)
Pseudo without RNA19 (9.0%)11 (6.1%)39 (4.1%)33 (3.5%)
Repeats55.85%54.17%34.53%34.48%