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Table 3.

Assembly score results for nine different data sets of synthetic HiFi reads with coverage 30×, based on a repetitive region with a variable-length (up to ±5% per copy) repeat unit of length {15, 20, 25} kb, and P = {1/250, 1/500, 1/1000}

Synthetic data set			Assembly score
Repeat unit size (kb)	Number of copies	P	RAmbler	hifiasm	LJA	HiCANU	Verkko
15	5	1/250	0.493	0.357	0.327	0.239	0.251
		1/500	0.993	0.545	0.658	0.165	0.204
		1/1000	0.454	0.426	0.346	0.547	0.408
20		1/250	0.422	0.599	0.418	0.441	0.276
		1/500	0.797	0.309	0.618	0.312	0.246
		1/1000	0.896	0.213	0.395	0.206	0.294
25		1/250	0.637	0.486	0.636	0.227	0.354
		1/500	0.773	0.173	0.970	0.254	0.471
		1/1000	0.465	0.231	0.409	0.278	0.345

[i] Numbers in bold indicate the best assembly score on each row.