Markup | Genome Research

Table 1.

The summary of validated motifs

Species	Motif	Hammerhead	nanodisco^a	Methyltransferases
A. pittii	CATCTC	√	√
A. pittii	CGAAG	√	√
B. cereus	CTTCTG	√
E. coli	GATC	√		√
E. coli	CCWGG	√	√	√
E. coli	GCYNNNNNCT	√
E. faecium	RAYCNNNNNNTTRG	√	√
E. faecium	CYAANNNNNNGRTY	√	√	√
K. pneumoniae	GATC	√	√	√
K. pneumoniae	GTGANNNNNNNTGG	√		√
K. pneumoniae	CCWGG		√
P. aeruginosa	TAGACGC	√	√
P. aeruginosa	SATSNNSNNSNNS		√
S. aureus	GWAGNNNNNNTAAA	√		√
S. aureus	GGANNNNNNTGG	√		√
S. aureus	GATC	√	√	√
S. enterica	GATC	√		√
S. enterica	CAGAG	√		√

[i] ^ananodisco was run with default parameters.