Table 1.

Tools for novel allele variant inference from AIRR-seq data and their characteristics

NumbersTool nameYearSupported chain type(s)Supported gene type(s)Programming language(s)Suitable for inference from hypermutated repertoires
1MiXCR2023IGH, IGK, IGL, TRA, TRBV, JJava, KotlinYes
2TIgGER2015IGH, IGK, IGLVRYes
3IgDiscover2016IGH, IGK, IGL, TRA, TRBV, D, JPythonNo
4Partis2019IGH, IGK, IGLVC, C++, Perl, PythonYes
5ImPre2016IGH, IGK, IGL, TRA, TRBV, JC, PerlYes