Markup | Genome Research

Table 2.

The assembly statistics of the genomes used for validation

Archetype species	Species	Assembly level	Contig number	Total length	N50	L50	No. per 100 kb
Homo sapiens	Mus musculus	Chromosome	61	2,728,222,451	130,530,862	9	2697.8
Homo sapiens	Mus musculus	Scaffold	12,661	2,801,301,292	1,291,016	585	9412.4
Homo sapiens	Mus musculus	Contig	224,709	2,477,635,466	24,821	29,731	0
Danio rerio	Oryzias latipes	Chromosome	25	734,057,086	31,218,526	11	66.9
Danio rerio	Oryzias latipes	Scaffold	298	772,952,521	31,949,249	12	11.6
Danio rerio	Oryzias latipes	Contig	2762	737,644,925	971,613	205	0
Arabidopsis thaliana	Solanum tuberosum	Chromosome	13	810,654,046	61,165,649	6	15,784.6
Arabidopsis thaliana	Solanum tuberosum	Scaffold	73,172	882,561,945	39,082	5913	1069.2
Arabidopsis thaliana	Solanum tuberosum	Contig	642,609	827,722,137	1487	144,345	0
Triticum aestivum	Ozyra sativa	Chromosome	63	375,049,285	29,958,434	6	31.53
Triticum aestivum	Ozyra sativa	Scaffold	12	375,082,798	30,085,288	6	2.27
Triticum aestivum	Ozyra sativa	Contig	304	392,277,955	27,391,607	7	0