Table 5.

Cluster Splitting of Gene Clusters Within 76,032 cDNA Clones

Gene ID Copies Core clusters Total Percent of copies Diversity index
Ef1_α669319 (396), 209 (225), 9 (13),  4 (4), 2 (3), 2 (2), 2 (2)54982.060.303
Cytochrom_cox_I274217 (225), 20 (23), 2 (2)23987.230.199
clone_190B1254218 (264), 5 (5)22387.800.159
tubulin_β207195 (199)19594.200.067
40SRibo_protS6183161 (161), 6 (7)16791.260.129
40SRibo_protS410083 (83), 5 (6)8888.000.183
60SRibo_protL48570 (103)7082.350.162
GAPDH8272 (78)7291.140.148
Ef1_β6763 (69)6394.030.073
human_calmodulin3214 (15), 3 (3)1753.130.637
heat_shock_cogKD712815 (17)1553.570.565
heat_shock_cogKD902618 (19)1869.230.386
human_TNF_receptor122 (2), 2(2)433.330.907
clone_244D1484 (4)450.000.469
clone_241F1722 (2)2100.000.000
  Total2029172084.770.292

[i] The gene 40SRibo_protS6 (human ribosomal protein S6 gene) is split into two clusters. One hundred sixty-one copies are clustered in a cluster of size 161 (numbers in brackets refer to the calculated cluster sizes), and 6 copies are clustered in a cluster of size 7. Together, 167 copies of that gene can be identified, which is a proportion of 91.26% of all copies of that gene. The rest of the copies are split into other clusters; the diversity index is 0.129, which is still low.