Exon Prediction Evaluated at the Exonic Level, Using the 176 ALLSEQ Human Genes as Test Case
| Unmutated[i] | Mutated[i] | |||||||
| Sn | Sp | ME | WE | Sn | Sp | ME | WE | |
| FGENEH | 0.71 | 0.68 | 0.11 | 0.15 | 0.31 | 0.34 | 0.28 | 0.20 |
| GeneID+ | 0.69 | 0.65 | 0.09 | 0.18 | 0.27 | 0.26 | 0.27 | 0.30 |
| GeneParser 3 | 0.61 | 0.61 | 0.11 | 0.14 | 0.34 | 0.41 | 0.28 | 0.11 |
| Grail 2 | 0.49 | 0.53 | 0.19 | 0.13 | 0.24 | 0.27 | 0.32 | 0.13 |
| EbEST | 0.37 | 0.58 | 0.43 | 0.02 | 0.31 | 0.53 | 0.43 | 0.08 |
[i] (Sn) Sensitivity; (Sp) specificity. The data for FGENEH, GeneID+, GeneParser 3, and Grail 2 were cited and recalculated from Burset and Guigo (1996). (For details, see Methods.)