Transcripts Located between D16S468/D16S3070 and Cosmid 377A12
| Clone size[i] | Accession no. | Expression Data[ii] | Database homology[iii] | Methods of identification[v] | RACE[vii] | ||||||
| size(s) on Northern blot (kb) | tissue specif. | ||||||||||
| BLASTN ( P) | BLASTX ( P) | dbEST[iv] | DS[vi] | ET[vi] [vii] | SS[vi] | CS[vi] [vii] | |||||
| R44239 (1.8) | R44239 | 5.0 | all | none | none | 4 | − | − | + | N.A. | N.D. |
| Gene 1 (1.1) | AA631968 | 6, 6.8 | K, Th, Sp | none | none | 1 | + | 1 | + | N.A. | N.D. |
| NK4 (1.0) | M59807 | 1.0 | all | none | none | 20 | + | − | + | N.A. | N.D. |
| ZNF210 (2.2) | AF060865 | 5, 3 | H, Sm, P | KIAA03226 (10−114) | MLZ-4 (10−89) | 12 | − | 6 | + | N.A. | 5′ |
| PL59 (1.4) | AF098968 | mult (<2.5) | all | none | none | 2 | + | 3 | + | N.A. | 5′, 3′ |
| ZNF213 (3.2) | AF017433 | 3.8 | all | FPM (10−44) | ZNF20 (10−56) | 0 | + | 2 | + | N.A. | N.D. |
| V9 (1.4) | AF098666 | 1.4 | Sp, Si | none | Caspase-6 (10−7) | 0 | − | 2 | + | + | 5′ |
| v57c10 (0.5) | AF098665 | N.F. | brain (cDNA)[viii] | none | none | 0 | − | − | + | + | 5′ |
| v57c7 (0.7) | AF098667 | N.F. | brain (cDNA)[viii] | none | none | 1 | − | 1 | + | + | 5′, 3′ |
| OR1F1 (0.9)[ix] | Y14442 | N.D. | N.A. | RATOLFPROC (10−245) | OLF5_RAT (10−161) | 0 | − | − | + | + | N.D. |
| OR1F2 (0.9)[ix] | AJ003145 | N.D. | N.A. | RATOLFPROC (10−178) | OLF5_RAT (10−152) | 0 | − | − | + | + | N.D. |
| ZNF200 (2.1) | AF060866 | 2–4 | all | ZNF184 (10−45) | ZNFZ135_HU (10−50) | 5 | + | 1 | + | + | N.D. |
| MEFV (3.5) | AF018080 | 3.7 | neutrophils | HUMRFPA (10−51) | HUMRFPA (10−107) | 0 | − | 2 | + | N.A. | N.D. |
| FPM315 (3.5) | AA631982 | 3.5, 4.0 | all | ZNF20 (10−126) | ZNF20 (10−137) | 7 | + | − | + | N.A. | N.D. |
| Clone 7 (0.4) | AA631981 | 3.6 | all | ZNF75 (10−35) | ZNF75 (10−12) | 0 | + | − | + | N.A. | N.D. |
| OR2C1 (0.9)[ix] [x] | AF098664 | N.D. | N.A. | MUSOR3X (10−247) | MUSOR3 (10−176) | 0 | − | N.D. | + | N.A. | N.D. |
[i] Size of largest cDNA clone or composite of several overlapping clones (in kb).
[ii] Tissues are designated as follows: (H) Heart; (K) kidney; (P) pancreas; (Si) small intestine; (Sp) spleen; (Th) thymus; (Sm) smooth muscle. (Mult) Multiple bands observed.
[iii] For BLASTN and BLASTX analysis the gene with lowestP value (<0.05) is shown in parentheses.
[iv] The number of EST clones with nearly identical DNA sequence to a given FMF region gene are indicated.
[v] (DS) Direct selection, (ET) exon trapping; (SS) sample sequencing; (CS) complete sequencing. (+) Clone identified, (−) no clone found; number of independent exon trap clones identified shown.
[vi] Sequences of cDNAs identified by other methods present in whole or in part indicated by +.
[vii] (N.A.) Not applicable; (N.D.) not done.
[viii] Screened by RT–PCR.
[ix] Size of putative ORF based on sequence homology.
[x] This transcript lies outside the 285-kb interval subjected to multiple methods of transcript identification.