False-Negative Prediction Error Rates for Optimal Orders of the Root and GenBank Models for 10 Species
| Species name | Root model | GenBank model | |||
| optimal order | error rate | optimal order | error rate | ||
| Archaeolglobus fulgidus | 3 | 0.096 | 5 | 0.087 | |
| Bacillus subtilis | 4 | 0.133 | 5 | 0.119 | |
| Escherichia coli | 4 | 0.137 | 5 | 0.113 | |
| Haemophilus influenzae | 3 | 0.073 | 4 | 0.077 | |
| Helicobacter pylori | 3 | 0.077 | 5 | 0.082 | |
| Mycoplasma genitalium | 3 | 0.122 | 4 | 0.105 | |
| Methanococcus jannaschii | 3 | 0.067 | 4 | 0.060 | |
| Mycoplasma pneumoniae | 3 | 0.112 | 5 | 0.104 | |
| Methanobacterium thermoautotrophicum | 4 | 0.098 | 5 | 0.084 | |
| Synechocystis | 4 | 0.122 | 5 | 0.120 | |