Frequency of Associated Haplotype in Control AJ Chromosomes
| Locus | Observed no. | Frequency | |||||||||
| D9S62a | D9S62b | D9S159 | D9S2158 | D9S2159 | D9S2160 | D9S63 | D9S2162 | ASS | control[i] | expected[ii] | |
| 2 | 8 | 12 | 4 | 4 | 4 | 16 | 4 | 12 | 0 | 0.0 | 0.0 |
| 2 | 8 | 12 | 4 | 4 | 4 | 16 | 4 | 0 | 0.0 | 0.0 | |
| 2 | 8 | 12 | 4 | 4 | 4 | 16 | 2[iii] | .007 | 0.0[iv] | ||
| 8 | 12 | 4 | 4 | 4 | 16 | 2[iii] | .007 | 0.0[iv] | |||
| 12 | 4 | 4 | 4 | 16 | 2[iii] | .007 | .001[v] | ||||
| 12 | 4 | 4 | 4 | 6[iii] | .021 | .009[vi] | |||||
| 8 | 12 | 4 | 4 | 4 | 3[iii] | .011 | .001[iv] | ||||
| 4 | 4 | 4 | 19[iii] , [vii] | .068 | .04[vi] | ||||||
| 4 | 4 | 4 | 16 | 7[iii] , [vii] | .025 | .005[iv] | |||||
| 4 | 4 | 4 | 16 | 4 | 2[vii] | .007 | .002[vi] | ||||
| 16 | 4 | 12 | 0 | 0.0 | .003 | ||||||
| 4 | 16 | 4 | 12 | 0 | 0.0 | 0.0 | |||||
[i] Expected frequencies calculated by multiplying individual allele frequencies from Table 1 and Risch et al. (1995).
[ii] Base on 280 phased control chromosomes.
[iii] These include the same two control chromosomes.
[iv] P << 0.001.
[v] P = 0.001.
[vi] P < 0.05.
[vii] This increase in observed number suggests some linkage disequilibrium between these markers.