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Table 6.

Quick reference for definitions of metrics used frequently throughout this study

Metric	Formula	Threshold
Precision	$\frac{TP}{TP + RP}$	Across quality filter levels
Recall	$\frac{TP}{TP + FN}$	Across quality filter levels
cTPR	$\frac{TP}{TP + FN}$	Across alt-allele coverage levels
cFDR	$\frac{RP}{RP + TP}$	Across alt-allele coverage levels