Table 1.

Summary of strains, ChIP-seq data sets, and stages for worm and fly TFs

TF setWormFly
Total TFs833659
TFs set asidea1930
TFs_targeted640659
TFs_strainsb514616
TFs_ChIP'ed356605
Stage#Stage#
Embryo    125Embryo528
L1     94Larvad  42
L2     47cPrepupa59
L3     46Pupa   20
L4    105Adult    22
Young adult108 Unknown7

[i] aIn the worm some rapidly evolving nhr genes were not targeted.

[ii] bIn the worm 110 TFs with strains were not ChIP'ed because expression was cytoplasmic, expression was insufficient to ChIP, the strain had a phenotype or the gene was a rapidly evolving nhr.

[iii] cOne experiment was done with dauers.

[iv] dWandering third instar.