The percentage of the 50 data sets under each demographic scenario for which, when the causal SNP is excluded, at least one of the nine other SNPs in gene 1 is significantly associated with disease
Power (%): Causal SNP excluded | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| FST/struct | CHISQ | GC | SLR | BLR | STR2 | AM2 | |||||
| (1) No structure | 86 | 82 | 84 | 84 | 62 | 84 | |||||
| (2) Low/eq | 88 | 84 | 94 | 88 | 62 | 86 | |||||
| (3) High/eq | 76 | 60 | 68 | 72 | 58 | 68 | |||||
| (4) Low/un | 74 | 68 | 72 | 72 | 72 | 72 | |||||
| (5) High/un | 70 | 60 | 68 | 66 | 66 | 66 | |||||
| Average (SE) | 79 (2.8) | 71 (3.1) | 77 (2.9) | 76 (2.9) | 64 (3.4) | 75 (3.0) | |||||
[i] The final row gives the mean over the first five rows, and its standard error (SE).