Using random Perlegen Class A SNPs
Genomic regions | Total number of non-CpG-prone sites in reliable alignment | Number of SNPs | Dsnp, SNP density per nucleotide | Dsnp/Dsnpo |
|---|---|---|---|---|
| “Neutral” | 7,194,108 | 8081 | 0.00112 | 1 (by definition) |
| CNG | 211,204 | 195 | 0.00092 | 0.82 |