Comparison Between BAC-End Sequence Coordinates and In Silico or Neighborhood
Paired end sequence 82,813 | Single end sequence 54,293 | None 52,583 | |||||
|---|---|---|---|---|---|---|---|
| Coordinate type | Total | Correlationa | Total | Correlationa,b | Total | ||
| In silico anchor | |||||||
| 157,473 | 73,305 | 70,944/900/1461 (97%/1%/2%) | 45,102 | 17,850/25,133/2119 (40%/55%/5%) | 39,066 | ||
| Neighborhood only | |||||||
| 21,976 | 6257 | 5831/50/376 (93%/1%/6%) | 6876 | 5862/379/635 (85%/6%/9%) | 8843 | ||
| None | |||||||
| 10,240c | 3251 | 2315 | 4674 | ||||
Only clones in the map are listed here. Paired end sequence coordinates located on different chromosomes or >500 kb apart on the same chromosome have been removed.
a Categories are the number of clones with overlapping coordinates/number clones with nonoverlapping coordinates/number of clones with coordinates on different chromosomes. The percentages for each category, calculated as end sequence versus in silico mapping or end sequence versus neighborhood, are given in parentheses
b An in silico anchor was considered to be nonoverlapping with a single end sequence coordinate if it fell outside of the bounds of the in silico anchor
c 9895 of these are singletons