Coverage and Sizes for the Test Data Sets
Number of expressways | Number of clones in expressways | Average positive overlap of clones in expressways | Average negative overlap of clones in expressways | Average expressway length | |||
| Simulated (unmasked) | 31 | 145 | 1.7 kb | 3.4 kb | 687 kb | ||
| Simulated (masked) | 35 | 142 | 1.8 kb | 4.1 kb | 605 kb | ||
| Syngenta | 37 | 132 | 4.9 kb | 8.4 kb | 452 kb | ||
| BGI | 40 | 104 | 3.0 kb | 1.5 kb | 321 kb | ||
| Monsanto | 17 | 35 | 5.2 kb | 6.2 kb | 273 kb | ||
| Data set | Number of junctions | Number of gaps | Average length of junctions | Average length of gaps | Number of bad pairs | Coverage | |
| Simulated (unmasked) | 2 | 21 | 53 kb | 50 kb | 11 | 82% | |
| Simulated (masked) | 5 | 23 | 56 kb | 62 kb | 4 | 81% | |
| Syngenta | 10 | 27 | 41 kb | 103 kb | ? | 80% | |
| BGI | 7 | 32 | 23 kb | 168 kb | ? | 62% | |
| Monsanto | 1 | 16 | 12 kb | 400 kb | ? | 24% | |