Table 1.

Summary of Duplicated Segments

Duplicated segment[i] Size of each duplicated segment (kb)[ii] Percent identity[iii]
dpA (MMU5/MMU6)58.4/74.596.3%
dpA (MMU5/MMU8)58.4/ND96.1%
dpA (MMU6/MMU8)74.5/ND95.6%
dpA (MMU5/RNO4)58.4/ND84.3%
dpB (MMU5/MMU6)5.0/5.293.3%
dpC (MMU5/MMU1)15.1/14.095.2%
dpC (MMU5/RNO4)15.1/ND84.8%
dpD (MMU5/MMU1)24.2/26.894.8%
dpD (MMU5/RNO4)24.2/ND85.6%
dpE (MMU5/MMU1)4.4/4.493.8%
dpE (MMU5/RNO4)4.4/ND85.1%
dpF (MMU5/MMU7)10.3/ND96.1%
dpG (MMU5/MMU7)7.0/ND93.5%
dpH (MMU6/MMU8)8.3/ND96.4%
dpI (MMU6/MMU8)22.1/ND96.8%
dpJ (MMU6/MMU8)9.1/ND90.2%
dpK (MMU6/MMU6)16.0/14.697.3%
dpL (MMU6/MMU6)14.6/14.496.3%

[i] Each duplicated segment (dpA through dpL) is listed in a fashion that allows pair-wise comparisons between copies on the indicated mouse or rat chromosomes (in parentheses). Note that the location and sequence of each indicated duplicated segment are available in the annotated sequence files at www.nisc.nih.gov/data.

[ii] The size of each duplicated segment on the two chromosomes listed in the far-left column is provided. ND indicates that the size could not be accurately determined due to the lack of continuity of the available genomic sequence. Note that the genomic interval encompassing any two duplicated segments often varies due to both large and small insertions and deletions.

[iii] The percent identity between the sequences in gap-free alignments of the two duplicated segments listed in the far-left column is provided in each case.