Table 3B.

Top 50 Tags Expressed at 37°C for Strain B3501

SAGE tag Frequency (15,363 total) Percentage Preliminary gene designation E-value of top BLASTx result Accession no. of BLASTx
cgacagaccg 2071.35%Translation elongation factor 10.0/0.0[iii] C. neoformans U81804
aggaagagaa 1250.81%Hypothetical protein (Agaricus bisporus)2.00E-22/5.00E-05[iii] A. bisporus AJ271701
aaaaaaaaaa 1190.77%NO HITS[ii]
gcgttacttg 850.55%Zinc transporter2.00E-27 S. cerevisiae Z72777
ctccgccgag 850.55%Pyruvate decarboxylase1.00E-72/3.00E-40[iii] Pichia stipitis U75310
gtcgtagagt 820.53%Enolase1E-131 S. cerevisiae J01322
gtcggtggta 760.49%ATP synthase—β chain0.0/3.00E-43[iii] K. lactis U37764
ccagaagttg 680.44%Mitochondrial thioredoxin2.00E-39/2.00E-72[iii] S. cerevisiae X59720
aatgactttt 680.44%NO HITS[ii]
atatgacata 670.44%Glycine dehydrogenase0 S. pombe Z54308
cgagtcgtat 620.40%Iron permease2E-23 S. pombe Z67998
catttacata 570.37%NO HITS[ii]
ttcggcaagg-5′ 570.37%ADP, ATP carrier protein1E-115/1.00E-132[iii] G. hirsutum AF006489
gaacgatgct 560.36%NO HITS[ii]
atatgaaaga 550.36%NO HITS[ii]
cgcggaaagg 540.35%NO HITS[i]
gtattgaccc 520.34%Phosphoketolase1.00E-165/1.00E-106[iii] Lactococcus lactis AE006381
tctttgatgt-3′ 490.32%ADP, ATP carrier protein1.00E-110/2.00E-72[iii] Gossypium hirsutum AF006489
aacgtctgcc 450.29%NO HITS[i]
attgagatgg 440.29%NO HITS[ii]
atttccgccg 430.28%Serine-threonine protein kinase7E-65 M. musculus U48737
actaccttct 420.27%Ribosomal protein RPP11.00E-13 C. elegans AF003139
acgtaccttt 410.27%NO HITS[ii]
cacaatcctt 410.27%Ubiquitin/ribosomal protein RPS27A fusion protein6.00E-36/7.00E-40[iii] N. crassa U01220
ggccgacctg 410.27%Ribosomal protein RPL112.00E-56/5.00E-73[iii] S. pombe Z69240
catctattcc 400.26%NO HITS[i]
cacgttcacg 400.26%Thioredoxin peroxidase2.00E-39/2.00E-64[iii] S. pombe AL031798
gcattggcgt 390.25%ER chaperone BiP0.0/5.00E-20 Aspergillus oryzae AB030231
actatcgcct 380.25%Ubiquitin conjugating enzyme8.00E-45/2.00E-75[iii] Glomerella cingulata AF030296
gctcgcgacg 360.23%60S ribosomal protein RPL22.00E-72 D. melanogaster AF098520
tccttccgag 360.23%Glyceraldehyde-3-phosphate dehydrogenase1.00E-112/0.0[iii] C. neoformans AF106950
cctgttctcg 360.23%NO HIT[ii]
tctgtcgagg 350.23%40S ribosomal protein RPS126.00E-36/7.00E-42[iii] S. pombe AL031154
cattcgttca 350.23%NO HIT[ii]
tagcctttcg 340.22%NO HIT[ii]
atgggctccc 340.22%ATP synthase—γ-chain6.00E-44/9.00E-66[iii] S. pombe AL031856
gctcctctta 330.21%ATP synthase—α-chain2.00E-58/9.00E-46[iii] S. pombe M57955
acatcgatct 320.21%60S ribosomal protein RPL313E-25 Cyanophora paradoxa AJ005204
gcagatcgat 320.21%60S ribosomal protein RPL393.00E-09/1.00E-13[iii] K. marxianus S53434
gatgcttttt 300.20%60S ribosomal protein RPL199.00E-31 S. pombe AB010048
ggttacgctg 300.20%Mitochondrial malate dehydrogenase1.00E-115[iii] S. cerevisiae J02841
cggtgcctgc 300.20%60S ribosomal protein RPL153.00E-47/4.00E-88[iii] Quercus suber AJ001346
aaatggtttg 290.19%NO HIT[ii]
gctaacgctg 290.19%Cyclophilin A5.00E-76/2.00E-91[iii] C. neoformans AF333996
aaccgcacca 290.19%Peripheral benzodiazepine receptor6.00E-16[iii] Homo sapiensJE0149
agtcctcttc 280.18%60S ribosomal protein RPP21E-15 Alternaria alternata U87806
cagcagttta 280.18%NO HITS[ii]
cacggcgcat 270.18%60S ribosomal protein RPL412E-39 C. neoformans AF118148
tagccgggaa 270.18%NO HITS[ii]
catagttggt 270.18%Heat shock protein 70 family0 Malassezia sympodialis AJ428052

[i] Serial analysis of gene expression (SAGE) tag does not have an associated contig at Stanford or expressed sequence tag (EST) at http://www.genome.ou.edu/cneo.html.

[ii] Identified EST does not have a significant BLASTx result at http://www.ncbi.nlm.nih.gov/.

[iii] EST BLASTx result.