Table 1.

NBS-LRR Sequences Analyzed for Positive Selection

Group[i] Type[ii] Sequences[iii] Length[iv] Identity[v]
1TNLAt1g64070, At2g16870, At5g58120, At1g63750, At1g63870, At1g63880, At1g63730, At1g63740, At1g56510, At1g56520, At1g56540136458.0
2TNLAt5g40910, At5g40920, At5g41550, At5g41540, At5g41750, At5g41740101165.4
3TNLAt4g11170, At5g49140118350.6
4TNLAt5g17970, At5g1836091157.5
5TNLAt2g14080, At1g65850, At5g38340, At5g44510, At1g69550, At5g11250, At3g44630, At3g44480, At3g44400, At3g44670 (RPP1)[vi] 143659.0
6TNLAt5g18350, At5g18370127260.3
7TNLAt5g46450, At5g46470, At4g08450, At5g40060, At1g31540, At5g46260, At5g46270, At5g46510, At5g46520124960.9
8TNLAt5g40100, At1g17600, At1g72840, At4g09430102553.4
9CNLAt1g63360, At1g62630, At5g63020, At5g0540093453.9
10CNLAt4g14610, At1g12210, At1g12220, At1g12280, (RPS5), At1g12290, At4g1078091159.4
11NLAt1g61180, At1g61310, At1g61300, At1g6119097886.3
12NLAt5g43740, At1g51480, At1g1589086869.6
13NLAt4g27190, At4g2722099550.3
14CNLAt1g58400, At1g58410, At1g58390, At1g59620, At1g59780, At5g43470 (RPP8)[vi], At5g48620, At5g35450, At1g53350, At1g1092094959.1
15CNLAt3g46530 (RPP13)[vi], At3g46730, At3g4671087266.3
16NLAt5g04720, At5g47280, At1g33560, At4g3330085866.6
17NLAt5g66900, At5g6691082273.2
18TNLAt3g51570, At4g19530, At5g45060, At545250 (RPS4)[vii], At5g17880120254.1
19TNLAt1g27170, At1g27180159681.5
20TNLAt4g16920, At4g16950 (RPP5)[vi], At4g16860, At4g16890, At4g16940, At4g16960, At4g16900, At5g51630123169.2
21TNLAt5g45260, At5g45050144070.9
22TNLAt5g45200, At4g36150127150.5

[i] Group designation is arbitrary.

[ii] TNL, TIR-NBS-LRR; CNL, coiled-coil-NBS-LRR; NL, NBS-LRR.

[iii] Names from the Munich Information Center for Protein Sequence Arabidopsis database (http://mips.gsf.de/proj/thal/db/index.html).

[iv] Length of amino acid alignment, with gaps.

[v] average within group amino acid sequence identity.

[vi] In Col-0, this sequence is the most similar to the R gene (in parentheses) characterized in other ecotypes.

[vii] Characterized R gene in Col-0 (gene name in parentheses).