Table 1.

Number of Different HERV-W Elements in the Human Genome

Group Number Complete 5′ truncation[i] 3′ truncation[i] 5′3′ truncation[i]
poly(A)17646107230
retro (internal sequence–containing)772915249
retro (soloLTR)34330620134
undef5800058

[i] Truncations were defined according to alignments with a particular consensus sequence for each group. The terminal gap was counted if the start or the end of the element was more distant than 20 bp from the consensus termini.