The Complete List of bHLH Genes fromCaenorhabditis elegans
| Gene name | Localization | Family | Status | Accession No. |
| C34E10.7 (cnd-1) | III: −2,01 | NeuroD | 3 | sp‖P46581 |
| Y69A2AR | *** * | Neurogenin | 1 | *** * |
| HLH-2 (MO5B5.5) | I: 1,82 | E12/E47 | 3 | TR:Q17588 |
| HLH-1 (BO3O4.1) | II: −4,51 | MyoD | 4 | SW:P22980 |
| HLH-3 (T29B8.6) | II: 1 | Achaete-Scute | 1 | gb‖AAB38323.1 |
| C18A3.8 | II: 1,11 | Achaete-Scute | 1 | TR:Q09961 |
| F57C12.3 | X: −19,47 | Achaete-Scute | 1 | TR:Q20941 |
| C28C12.8 | IV: 3,86 | Achaete-Scute | 1 | TR:Q18277 |
| F38C2.2 | IV: 24,06 | Beta3 | 1 | TR:O45489 |
| DY3.3 | I: 3,04 | Beta3/Misti | 1 | TR:O45320 |
| lin-32 (T14F9.5) | X: −15,13 | Atonal | 3 | TR:10574 |
| ZK682.4 | V: 1,87 | MyoR | 1 | TR:Q23579 |
| HLH-8 (CO2B8.4) | X: −0,63 | Twist | 4 | gb‖AAC26105.1 |
| C44C10.8 | X: 5,8 | Hand | 1 | TR:Q18612 |
| F48D6.3 | X: −8,42 | PTF1 | 1 | TR:Q20561 |
| C43H6.8 | X: −14 | NSCL | 1 | TR:Q18590 |
| F46G10.6 | X: 12,32 | Max | 1 | TR/Q18711 |
| T19B10.11 | V: 3,05 | Max | 1 | TR:P90982 |
| F40G9.11 | III: −28,29 | USF | 1 | gb‖AAC68792 |
| W02C12.3 | IV: −1,14 | MITF | 1 | TR:P91527 |
| F58A4.7 | III: 0,63 | AP4 | 1 | SW:P34474 |
| Y47D3B.7 | III: 8,9 | SREBP | 1 | TR:Q9XX00 |
| C15C8.2 | V: 4,63 | AHR | 1 | emb‖CAA99775.1 |
| C41G7.5 | I: 3,75 | AHR | 1 | emb‖CAB51463.1 |
| F38A6.3 | V: 27,08 | Hif/Sim/Trh | 1 | pir‖T21944 |
| C25A11.1 (AHA-1) | X: 0,43 | ARNT | 1 | TR:O02219 |
| unc-3(Y16B4A.1) | X: 19,39 | COE | 4 | gb‖AAC06226.1 |
| lin-22 | IV: 6,9 | E (spl) | 3 | gb‖AAB68848.1 |
| C17C3.10 | II: −1,28 | E (spl) | 1 | gb‖AAB52693.1 |
| Y39A3CR.6 | III: −19,16 | Orphan | 1 | gb‖AAF605231 |
| T01D3.2 | V: 5,39 | Orphan | 1 | TR:P90953 |
| T15H9.3 | II: 1,51 | Orphan | 1 | emb‖CAA87416.1 |
| T01E8.2 | II: 2,22 | Orphan* | 1 | emb‖CAA88744.1 |
| F31A3.4 | X: 24,06 | Orphan* | 1 | TR:Q19917 |
| C17C3.8 | II: 1,28 | Orphan* | 1 | TR:Q18053 |
[i] The localization of the genes referred to the worm recombination genetic map as found in Wormbase. Sequences marked with an asterisk form a group with good bootstrap support (70%) which is found at the root of group A. The Y69A2AR gene was not found in the databases. Its sequence comes from Hallam et al. (2000).