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Table 1.

Genetic and Physical Locations of Rice Chromosomal Arm-Specific BAC Clones

Chromosomal arm	RFLP marker	Genetic position (cM)	Relative genetic position[i]	Selected BAC	Physical location[ii]	n[iii]
1S	C146	12.3	6.77	a0059H02	5.87 ± 0.66	10
1L	G370	140.8	77.49	a0026F14	78.64 ± 0.83	10
2S	S10889	11.5	7.43	a0095P12	8.00 ± 0.81	10
2L	C747	107.7	69.62	a0064F10	76.11 ± 2.22	10
3S	C725	13.3	7.95	a0076A03	5.95 ± 0.46	10
3L	G1015	142.8	85.41	a0007K12	86.39 ± 1.40	10
4S	C820	17.4	13.44	a0065E01	15.85 ± 0.87	10
4L	G177	111.2–111.7	85.02–86.10	a0080P07	85.24 ± 1.94	10
5S	R3166	18.8	15.73	a0096I15	6.90 ± 0.90	10
5L	C1230	119.5	100	a0036L10	97.89 ± 0.25	10
6S	G200	33.5	26.80	a0089N04	23.79 ± 1.70	10
6L	R1167	123.1	98.48	a0088F21	100 ± 0.00	10
7S	C1057	11.0	9.40	a0078O19	7.87 ± 1.27	10
7L	R1245	83.0	70.94	a0085M21	78.73 ± 1.25	10
8S	C166	26.2	22.04	a0005O22	11.33 ± 1.70	10
8L	R1963	118.1	99.34	a0085C09	82.61 ± 2.05	10
9S	G36	0.8	0.83	a0052I16	9.10 ± 0.78	10
9L	G293	94.7	98.54	a0061K19	97.89 ± 2.50	10
10S	S10620	1.2	1.43	a0045D16	1.54 ± 0.12	8
10L	C405	83.7	100	a0056G17	100 ± 0.00	8
11S	R2918	10.2	8.60	a0040B10	9.59 ± 0.73	10
11L	C1172	79.9	67.37	a0071H11	67.57 ± 0.54	10
12S	R1957	10.1	9.17	a0095C23	5.98 ± 1.25	10
12L	C901	110.1	100	a0011E08	100 ± 0.00	10

[i] Relative genetic position is calculated as (cmX ÷ cmT) × 100, where cmX = the cM value of the RFLP marker on the linkage map, cmT = the total cM value of the same linkage map (Harushima et al. 1998). For example, C146 was mapped to 12.3 cM on linkage map 1 that totals 181.7 cM. The relative genetic position of C146 is (12.3/181.7) × 100 = 6.77.

[ii] Physical location is calculated as (S ÷ T) × 100, where S = the distance (in μm) from the FISH hybridization site to the end of the short arm of the chromosome, and T = the total length of the chromosome in μm.

[iii] The number of measurements.