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Table 2.

List of All Known Cer LTR Retrotransposons in the SequencedC. elegans(N2) Genome

Element family	Genomic clone	Element type	Chromosome
Cer1	f44e2/par3	full	III
Cer1	c25a11	ltr	X
Cer1	c24h10	ltr	X
Cer1	y39e4b	ltr	III
Cer2	r03d7	full	II
Cer2	f53e10	ltr	V
Cer2-1	k08d10	frag	IV
Cer2-1	f49f1	frag	IV
Cer2-1	w04a8	ltr	I
Cer3	f58h7	full	IV
Cer3-1	y37h2a	frag	V
Cer3-1	y76b12c	ltr	IV
Cer3-1	y39e4a	ltr	III
Cer3-1	k09h9	ltr	I
Cer3-1	y39b6a	ltr	V
Cer3-1	e02h9	ltr	III
Cer3-1	y105e8e	ltr	I
Cer3-1	y23h5b	ltr	I
Cer3-1	y77e11a	ltr	IV
Cer3-1	y75b8a	ltr	III
Cer3-1	t09a5	ltr	II
Cer4	f15g10/t23e7	full	X
Cer5	t03f1	full	I
Cer5	f39b3	frag	X
Cer5	k02a2	frag	II
Cer5	c31e10	frag	X
Cer5	f22g12	frag	I
Cer5	r01h5	ltr	X
Cer5	y27f2a	ltr	II
Cer5	t27f6	ltr	I
Cer5	c25b8	ltr	X
Cer5	f49c8	ltr	IV
Cer5	f22e5	ltr	II
Cer5	w04g5	ltr	I
Cer5	y111b2g	ltr	III
Cer5	f56h6	ltr	I
Cer6	e03a3	full	III
Cer6	y102a5c	frag	V
Cer6	y53f4a	ltr	II
Cer6	y73f8a	ltr	IV
Cer6	zc487	ltr	V
Cer6	c55a1	ltr	V
Cer7	zc132	full	V
Cer7	h08m01	ltr	IV
Cer8	zk262/zk228	full	V
Cer8	c03a7	full	V
Cer8	c33e10	ltr	X
Cer9	y43f4a	full	III
Cer9	w09b7/f07b7	full	V
Cer9	f07b7/k06c4	full	V
Cer9	k09e3	frag	X
Cer9	c33c12/c40a11	frag	II
Cer9	c07d8/c56g3	frag	X
Cer9	b0047	ltr	II
Cer9	c13b9	ltr	III
Cer9	y59a8b	ltr	V
Cer9	y57a10a	ltr	II
Cer9	f15a2	ltr	X
Cer10	y81b9a/c35b8	full	X
Cer10	t23b12/zk994	frag	V
Cer10	t12b5	ltr	III
Cer10	y73f8a	ltr	IV
Cer10	t22b2	ltr	X
Cer11	t14g12	frag	X
Cer12	f21d9/f55c9	full	V
Cer12	k07c6	ltr	V
Cer12	w03g1	ltr	IV
Cer12	y51h4a	ltr	IV
Cer12	c01b9	ltr	II
Cer12	c09g1	ltr	X
Cer12	k04c1	ltr	X
Cer12	c44b12	ltr	IV
Cer12	y94h6a	ltr	IV
Cer12	c04g6	ltr	II
Cer12	y60a3a	ltr	V
Cer12-1	zc15	frag	V
Cer12-1	f41g4	frag	X
Cer12-1	k08d12	ltr	IV
Cer12-1	f58f6	ltr	IV
Cer13	y75d11a/w03h1	full	X
Cer13	c09b9	frag	IV
Cer14	y105c5b	frag	IV
Cer15	y102a5d/f40d4	full	V
Cer15	t11f9	frag	V
Cer15	y105e8a	ltr	I
Cer15-1	c52e2/c16c4	full	II
Cer15-1	f19b2	frag	V
Cer15-1	y40h7a	frag	IV
Cer15-1	y45f10c	ltr	IV
Cer16	r13d11	full	V
Cer16	f47d2	ltr	V
Cer16	f28d9	ltr	I
Cer16	f36a4	ltr	IV
Cer16-1	y71h2am	ltr	III
Cer16-1	f38c2	ltr	IV
Cer16-1	f11a6	ltr	I
Cer16-1	y32h12a	ltr	III
Cer16-1	f47b7	ltr	X
Cer16-1	f20b4	ltr	X
Cer16-2	f20b4/6r55	full	X
Cer16-2	zk1025/c27c7	frag	I
Cer16-2	t16g12	frag	III
Cer16-2	t05a1	frag	IV
Cer16-2	zc247	ltr	I
Cer17	r52	full	II
Cer19	r09h3/c36c9	full	X
Cer 19	c38d9	frag	V
Cer 19	y7a5a	ltr	X
Cer 19	f15d4	frag	II
Cer 19	t06a10	frag	IV
Cer 19	d1022	ltr	II
Cer 19	f35h10	ltr	IV
Cer 19	zk1055	ltr	V
Cer 19	c35d6	ltr	IV
Cer 19	t08g3	ltr	V
Cer 19	zk643	ltr	III
Cer 20	y87g2a	full	I
Cer 20	k01d12	full	V
Cer 20	f41b5	full	V
Cer 20	y50e8a	frag	V
Cer 20	t10g3	ltr	V
Cer 20	t28d6	ltr	III
Cer 20	c32b5	ltr	II
Cer 20	y94h6a	ltr	IV

[i] Genomic clone ID and chromosome locations were obtained from Wormbase (http://www.wormbase.org).