ABACUS SNP Detection and Genotyping Accuracy
| A. Accuracy of autosomal SNPs detection | ||
| Verified | Total Possible | |
| Singleton SNPs | 17 | 17 |
| Non-singleton SNPs | 91 | 91 |
| Total SNPs | 108 | 108 |
| B. Number of autosomal SNPs electronically verified | ||
| Number of SNPs electronically verified | 371 | |
| C. Accuracy of autosomal genotype calls | ||
| Number of verified homozygous genotype calls | 1515 | |
| Number of incorrect homozygous genotype calls | 0 | |
| Percent correct homozygote calls | 100.00% | |
| Number of verified heterozygous genotype calls | 423 | |
| Number of incorrect heterozygous genotype calls | 3 | |
| Percent correct heterozygote calls | 99.30% | |
| D. Accuracy of haploid genotype calls | ||
| Number of bases sequenced (6X coverage) | 17,423 | |
| Number of bases different from microarray chip calls | 0 | |
| Percent of bases identical | 100.00% |