Table 1.

Perfect Loopless Inverted Repeats from Size 4 bp to 60 bp in Chromosome III or Random Sequence

Length Sum of non-AT-rich chrom. III Sum of non-AT-rich using random sequence Sum of AT-rich chrom. III Sum of AT-rich using random sequence Sum of CG-rich chrom. III
420944024268529876941040854611
534972638947527041726295923093
6724809199183467841584700
711956112266971285534412627
825272300442135417433640
939526361721725811198246
109367933264263402132
1113435105265356229235
1234772760215170339
135163294719904507
1415097959391467
151844902755964
16597186402291
17630238299210
182177619920
192566010230
201081911630
21106164000
226126400
23432410
244314400
25162400
26904100
2760000
28903200
2940300
301403100
3150000
32502900
3330000
34202700
3510000
36202200
3700000
38401900
3920000
40001800
4100000
42101500
4300000
44001100
4500000
4690600
4700000
4800600
4900000
5000500
5100000
5200400
5300000
5410400
5500000
5600400
5700000
5800400
5910000
6000400

[i] “AT-rich” and “CG-rich” are defined as being comprised of those bases exclusively. “Non-AT-rich” sequences are heterogeneous in respect to base content. “Perfect” repeats of odd length are defined as including a single base at the central position but otherwise show complete base pairing in the stem. Perfect repeats of even length have no mismatches. Random files for analysis were generated with 36% GC content.