Table 2.

C57BL/6J BAC Clone Summary

Clone[i] Size[ii] (kb) Cen end Cen end seq.accession # Cen end map position Tel end Tel end seq.accession # Tel end map position
180a3180SP6 AF240489 83 kb proximal to 149m19–D13Die38T7 AF240490 Naip2intron 8
182m7190T7 AF240491 56 kb proximal to 149m19–D13Die39SP6 AF240492 Naip2 intron 2
220n14177SP6 AF240493 52 kb proximal to 149m19–D13Die40T7 AF240494 Naip2 intron 2
148d4191T7 AF240495 38 kb proximal to 149m19SP6 AF240496 Naip5 intron 12
434i9214T7 AF240497 Tfnr [iii]–D13Die41SP6 AF240498 Naip6 intron 13
64m10220T7 AF240499 Tfnr [iii]–D13Die41SP6 AF240500 Naip6intron 6
224a14194SP6 AF240501 Smn 5′ regionT7 AF240502 Naip6–Naip3 intergenic region
235150T7 AF240503 Smn exon 1SP6 AF240504 ΔNaip exon 7
286d6180T7 AF240505 Smn intron 1SP6 AF240506 Naip6–Naip3 intergenic region
164d12220SP6 AF240507 Naip2intron 5T7 AF240508 Naip1 exon 16
179k6194T7 AF240509 Naip2 intron 2SP6 AF240510 Naip1–Naip3 intergenic region
212o22194T7 AF240511 Naip5intron 15SP6 AF240512 Naip1 intron 9
367k11190T7 AF240513 Naip6 exon 16SP6 AF240514 Gtf2h2 [iv]
20112218T7 AF240515 Naip5–Naip6intergenic regionSP6 AF240516 56 kb distal to 26f17; D13Die43
201g3218T7 AF240517 Naip3intron 14SP6 AF240518 70 kb distal to 26f17; D13Die44
404e1190SP6 AF240519 Naip3intron 14T7 AF240520 48 kb distal to 26f17; D13Die42
24907125SP6 AF240521 Naip3 intron 9T7 AF240522 Gtf2h2 [iv]
477p2170T7 AF240523 Naip3intron 4SP6 AF240524 55 kb distal to 26f17; D13Die44
184a11194SP6 AF240525 Naip3intron 4T7 AF240526 79 kb distal to 26f17; D13Die45
480i6180SP6 AF240527 Naip3intron 1T7 AF240528 73 kb distal to 26f17; D13Die44
179b7210T7 AF240529 Naip3intron 1SP6 AF240530 113 kb distal to 26f17; D13Die46

[i] Clones 235 and 24907 are derived from the Genome Systems St. Louis, MO C57BL/6J BAC library. All remaining clones are derived from the RPCl-23 C57BL/6J BAC library.

[ii] Sizes determined from pulsed field gel analysis of Notl digested DNA (Methods).

[iii] No cDNA for mouse Tfnr has been described, so we cannot define exon nomenclature.

[iv] No cDNA for mouse Gtf2h2 has been described, so we cannot define exon nomenclature.