aDNA Library Clones that Displayed High Sequence Identity with cDNA or Genomic DNA (gDNA) of Previously Defined Gene Sequences
| Clone I.D. | Gene match | Region of match | Database entry | Chromosomal location of match | Gene type | Multigene family |
| ALP10 | BAT3 | 5′ upstream of CDS | gDNA | 6p21.3 | HLA-B-type transcript 3, Class III MHC | yes |
| ALP27 | Utrophin | 5′ to middle of CDS | cDNA | 6p24 | Dystrophin related structural protein | — |
| ALP35 | P0071 | 5′ upstream of CDS | cDNA | — | Armadillo junctional plaque protein | yes |
| ALP74 | FREAC4 | 5′ upstream of CDS | gDNA/cDNA | 5q12–13 | Transcription regulator | yes |
| ALP104 | ZNF74 | 5′ upstream of CDS | gDNA | 22q11.2 | Zinc finger RNA binding protein | — |
| ALP107 | FK506 | 5′ upstream of CDS | cDNA | — | Papamycin binding protein | yes |
| ALP112 | CHL1 | 5′ upstream of CDS | cDNA | 12p13, p11 | Putative helicase | yes |
| ALP114 | MET | 5′ upstream of CDS | gDNA | 9q34 | Unknown function | no |
| ALP120 | Immunoglobulin | 5′ upstream of CDS | gDNA | 22q11.2 | Immunoglobulin light chain | yes |
| ALP129 | STCH | 5′ upstream of CDS | gDNA | 21p11.2 | Microsomal stress 70 protein ATPase core | yes |
| ALP140 | QM | 5′ upstream of CDS | gDNA | Xq28 | Unspecified | yes |
| ALP143 | SelP | 5′ upstream of CDS | gDNA | — | Selenoprotein P, unknown function | — |
| ALP157 | WS bHLH | 5′ upstream of CDS | gDNA | 7q11.23 | Basic-helix-loop-helix leucine zipper | yes |
| ALP159 | Kinase A | 3′ downstream of CDS | cDNA | 17; 394.1 cR from pTEL | Anchor protein | yes |
| ALP162 | KIAA0702 | 5′ upstream of CDS | cDNA | — | Unknown function | — |
| ALP168 | MAD3 | 5′ upstream of CDS | cDNA | — | Transcriptional repressor | yes |
[i] Gene name, type, and chromosomal location (if known) of the match are indicated, as is the location of high sequence identity within each gene. CDS denotes coding sequence. All but two matches were located within the 5′ region of each gene.