Transposable Elements Predicted by Genie
| Strand | Begin | End | Genie | Genie EST | Genie ESTHOM | Other gene finder hits | Homology hits | Transposon name |
| F | 55,422 | 58,941 | — | — | X | 4 | 2 | Fw |
| R | 93,549 | 94,119 | X | X | X | 3 | 1 | G |
| R | 255,612 | 256,662 | — | — | X | 1 | 1 | Doc |
| R | 959,378 | 962,797 | — | — | X | 2 | 1 | Doc |
| R | 1,136,806 | 1,145,466 | — | X | X | 5 | 0 | Roo |
| R | 1,293,597 | 1,298,741 | — | X | X | 5 | 1 | Copia |
| F | 1,474,114 | 1,481,634 | X (2 genes) | — | — | 3 | 2 | Yoyo |
| F | 1,935,760 | 1,943,170 | X | X | X | 3 | 2 | Blood |
| F | 2,076,116 | 2,083,110 | — | — | X | 3 | 2 | 297 |
| F | 2,174,330 | 2,176,188 | — | — | X | 1 | 1 | Copia-like |
| F | 2,177,045 | 2,178,655 | — | — | X | 3 | 2 | Copia-like |
| F | 2,590,477 | 2,595,625 | — | — | X | 5 | 2 | Copia |
| F | 2,603,050 | 2,610,046 | — | — | X | 2 | 1 | 297 |
[i] The transposable elements that have an overlapped prediction byGenie are listed. The Begin and End coordinates are the transposable element coordinates from Ashburner et al. (1999).