Figures generated in the manuscript using biastools:  
Figure 5 - Merged_biastools_plot.pdf 
Figure S5 - HG003.GIAB.4.2.1.edit.indel_balance.pdf 
Figure S6 - HG004.GIAB.4.2.1.edit.indel_balance.pdf
Figure S7 - HG005.GIAB.4.2.1.edit.indel_balance.pdf 

Installation guide for biastools: 
https://github.com/maojanlin/biastools

Scripts used in line: 
run_biastools.sh 
run_indel.sh
