index	origin	start	end
1	Chr1	10000	122026459
CEN1	Chr1	122026460	125184587
2	Chr1	125184588	248946421
3	Chr2	10000	81511258
4	Chr2	81511259	82297410
5	Chr2	82297411	92188145
CEN2	Chr2	92188146	94090557
6	Chr2	94090558	125638436
7	Chr2	125638437	126920361
8	Chr2	126920362	171094279
9	Chr2	171094280	171800305
10	Chr2	171800306	193058098
11	Chr2	193058099	194121943
12	Chr2	194121944	209754150
13	Chr2	209754151	210407070
14	Chr2	210407071	226555188
15	Chr2	226555189	228433031
16	Chr2	228433032	241477503
17	Chr2	241477504	241530609
18	Chr2	241530610	242183528
19	Chr3	10000	90772458
CEN3	Chr3	90772459	93655574
20	Chr3	93655575	198235558
21	Chr4	10000	49708100
CEN4	Chr4	49708101	51743951
22	Chr4	51743952	80760888
23	Chr4	80760889	82618989
24	Chr4	82618990	190204554
25	Chr5	10000	46485900
CEN5	Chr5	46485901	50059807
26	Chr5	50059808	181478258
27	Chr6	60000	58553888
CEN6	Chr6	58553889	59829934
28	Chr6	59829935	73016270
29	Chr6	73016271	74348484
30	Chr6	74348485	170745978
31	Chr7	10000	58169653
CEN7	Chr7	58169654	60828234
32	Chr7	60828235	159335972
33	Chr8	60000	44033744
CEN8	Chr8	44033745	45877265
34	Chr8	45877266	76314228
35	Chr8	76314229	76854003
36	Chr8	76854004	145078635
37	Chr9	10000	43236167
CEN9	Chr9	43236168	45518558
38	Chr9	45518559	138334716
39	Chr10	10000	39686682
CEN10	Chr10	39686683	41593521
40	Chr10	41593522	58239159
41	Chr10	58239160	60066933
42	Chr10	60066934	133787421
43	Chr11	60000	51078348
CEN11	Chr11	51078349	54425074
44	Chr11	54425075	135076621
45	Chr12	10000	25311330
46	Chr12	25311331	26757201
47	Chr12	26757202	31649215
48	Chr12	31649216	33132959
49	Chr12	33132960	34769407
CEN12	Chr12	34769408	37185252
50	Chr12	37185253	125184531
51	Chr12	125184532	126826249
52	Chr12	126826250	131623591
53	Chr12	131623592	133265308
54	Chr13	16000000	16000000
CEN13	Chr13	16000001	18051248
55	Chr13	18051249	114354327
56	Chr14	16000000	16000000
CEN14	Chr14	16000001	18173523
57	Chr14	18173524	35159021
58	Chr14	35159022	36158900
59	Chr14	36158901	45329125
60	Chr14	45329126	46259041
61	Chr14	46259042	105883839
62	Chr14	105883840	106883717
63	Chr15	17000000	17000000
CEN15	Chr15	17000001	19725254
64	Chr15	19725255	101981188
65	Chr16	10000	36311158
CEN16	Chr16	36311159	38280682
66	Chr16	38280683	71979654
67	Chr16	71979655	72932358
68	Chr16	72932359	90228344
69	Chr17	60000	22813679
CEN17	Chr17	22813680	26885980
70	Chr17	26885981	30495337
71	Chr17	30495338	31183283
72	Chr17	31183284	83247440
73	Chr18	10000	15460899
CEN18	Chr18	15460900	20861206
74	Chr18	20861207	80263284
75	Chr19	60000	24498980
CEN19	Chr19	24498981	27190874
76	Chr19	27190875	58607615
77	Chr20	60000	26436232
CEN20	Chr20	26436233	30038348
78	Chr20	30038349	64334166
79	Chr21	5010000	10864560
CEN21	Chr21	10864561	12915808
80	Chr21	12915809	46699982
81	Chr22	10510000	12954788
CEN22	Chr22	12954789	15054318
82	Chr22	15054319	50808467
83	ChrX	10000	58605579
CENX	ChrX	58605580	62412542
84	ChrX	62412543	156030894
85	ChrY	10000	10316944
CENY	ChrY	10316945	10544039
86	ChrY	10544040	57217414
---
chromosome	KT	telo1_len	telo2_len
Chr1a	1+,CEN1+,2+	10000	10000
Chr1b	1+,CEN1+,2+	10000	10000
Chr2a	3+,5+,CEN2+,6+,7+,7+,8+,9+,10+,12+,13+,14+,15+,15+,16+,17+,18+,17+,18+,18+	10000	10000
Chr2b	3+,4+,5+,CEN2+,6+,7+,8+,9+,10+,11+,12+,13+,14+,15+,16+,17+,18+	10000	10000
Chr3a	19+,CEN3+,20+	10000	60000
Chr3b	19+,CEN3+,20+	10000	60000
Chr4a	21+,CEN4+,22+,23-,23+,24+	10000	10000
Chr4b	21+,CEN4+,22+,23+,24+	10000	10000
Chr5a	25+,CEN5+,26+	10000	60000
Chr5b	25+,CEN5+,26+	10000	60000
Chr6a	27+,CEN6+,28+,60+,30+	60000	60000
Chr6b	27+,CEN6+,28+,29+,30+	60000	60000
Chr7a	31+,CEN7+,32+	10000	10000
Chr7b	31+,CEN7+,32+	10000	10000
Chr8a	33+,CEN8+,34+,36+	60000	60000
Chr8b	33+,CEN8+,34+,35+,36+	60000	60000
Chr9a	37+,CEN9+,38+	10000	60000
Chr9b	37+,CEN9+,38+	10000	60000
Chr10a	39+,CEN10+,40+,42+	10000	10000
Chr10b	39+,CEN10+,40+,41+,42+	10000	10000
Chr11a	43+,CEN11+,44+	60000	10000
Chr11b	43+,CEN11+,44+	60000	10000
Chr12a	45+,47+,49+,CEN12+,50+,51+,52+,53-,53+	10000	10000
Chr12b	45+,46+,47+,48+,49+,CEN12+,50+,51+,52+,53+	10000	10000
Chr13a	54+,CEN13+,55+	16000000	10000
Chr13b	54+,CEN13+,55+	16000000	10000
Chr14a	56+,CEN14+,57+,58+,59+,29+,61+,62-	16000000	160000
Chr14b	56+,CEN14+,57+,58+,59+,60+,61+,62+	16000000	160000
Chr15a	63+,CEN15+,64+	17000000	10000
Chr15b	63+,CEN15+,64+	17000000	10000
Chr16a	65+,CEN16+,66+,67+,67-,68+	10000	110000
Chr16b	65+,CEN16+,66+,67+,68+	10000	110000
Chr17a	69+,CEN17+,70+,71-,72+	60000	10000
Chr17b	69+,CEN17+,70+,71+,72+	60000	10000
Chr18a	73+,CEN18+,74+	10000	110000
Chr18b	73+,CEN18+,74+	10000	110000
Chr19a	75+,CEN19+,76+	60000	10000
Chr19b	75+,CEN19+,76+	60000	10000
Chr20a	77+,CEN20+,78+	60000	110000
Chr20b	77+,CEN20+,78+	60000	110000
Chr21a	79+,CEN21+,80+	5010000	10000
Chr21b	79+,CEN21+,80+	5010000	10000
Chr22a	81+,CEN22+,82+	10510000	10000
Chr22b	81+,CEN22+,82+	10510000	10000
ChrXa	83+,CENX+,84+	10000	10000
ChrYa	85+,CENY+,86+	10000	10000
---
initialization
	autosomes: ['Chr1', 'Chr2', 'Chr3', 'Chr4', 'Chr5', 'Chr6', 'Chr7', 'Chr8', 'Chr9', 'Chr10', 'Chr11', 'Chr12', 'Chr13', 'Chr14', 'Chr15', 'Chr16', 'Chr17', 'Chr18', 'Chr19', 'Chr20', 'Chr21', 'Chr22']
	autosomal copy number: 1
	sex chromosomes: ['ChrY']
block 1: 8q21_recurrent_microdeletion
	deletion on segments [35+], from Chr8a to Chr8a
block 2: random events
	tandem duplication on segments [17+,18+], from Chr2a to Chr2a
	deletion on segments [4+], from Chr2a to Chr2a
	deletion on segments [46+], from Chr12a to Chr12a
	inversion on segments [62+], from Chr14a to Chr14a
	deletion on segments [48+], from Chr12a to Chr12a
	tandem duplication on segments [15+], from Chr2a to Chr2a
	inversion on segments [71+], from Chr17a to Chr17a
	left duplication inversion on segments [23+], from Chr4a to Chr4a
	deletion on segments [41+], from Chr10a to Chr10a
	right duplication inversion on segments [67+], from Chr16a to Chr16a
	left duplication inversion on segments [53+], from Chr12a to Chr12a
	balanced reciprocal translocation on segments [60+], from Chr14a to Chr6a
	balanced reciprocal translocation on segments [29+], from Chr6a to Chr14a
	tandem duplication on segments [7+], from Chr2a to Chr2a
	deletion on segments [11+], from Chr2a to Chr2a
	tandem duplication on segments [18+], from Chr2a to Chr2a
