index	origin	start	end
1	Chr1	10000	122026459
CEN1	Chr1	122026460	125184587
2	Chr1	125184588	174258808
3	Chr1	174258809	183912677
4	Chr1	183912678	248946421
5	Chr2	10000	92188145
CEN2	Chr2	92188146	94090557
6	Chr2	94090558	242183528
7	Chr3	10000	90772458
CEN3	Chr3	90772459	93655574
8	Chr3	93655575	101977876
9	Chr3	101977877	105154246
10	Chr3	105154247	198235558
11	Chr4	10000	49708100
CEN4	Chr4	49708101	51743951
12	Chr4	51743952	190204554
13	Chr5	10000	46485900
CEN5	Chr5	46485901	50059807
14	Chr5	50059808	91748709
15	Chr5	91748710	97636663
16	Chr5	97636664	181478258
17	Chr6	60000	58553888
CEN6	Chr6	58553889	59829934
18	Chr6	59829935	72404952
19	Chr6	72404953	77166723
20	Chr6	77166724	170745978
21	Chr7	10000	58169653
CEN7	Chr7	58169654	60828234
22	Chr7	60828235	159335972
23	Chr8	60000	44033744
CEN8	Chr8	44033745	45877265
24	Chr8	45877266	91509317
25	Chr8	91509318	96569331
26	Chr8	96569332	99218409
27	Chr8	99218410	102329904
28	Chr8	102329905	136907127
29	Chr8	136907128	145078635
30	Chr9	10000	43236167
CEN9	Chr9	43236168	45518558
31	Chr9	45518559	138334716
32	Chr10	10000	39686682
CEN10	Chr10	39686683	41593521
33	Chr10	41593522	133787421
34	Chr11	60000	51078348
CEN11	Chr11	51078349	54425074
35	Chr11	54425075	135076621
36	Chr12	10000	34769407
CEN12	Chr12	34769408	37185252
37	Chr12	37185253	55709846
38	Chr12	55709847	58147831
39	Chr12	58147832	133265308
40	Chr13	16000000	16000000
CEN13	Chr13	16000001	18051248
41	Chr13	18051249	114354327
42	Chr14	16000000	16000000
CEN14	Chr14	16000001	18173523
43	Chr14	18173524	38304846
44	Chr14	38304847	40640925
45	Chr14	40640926	106883717
46	Chr15	17000000	17000000
CEN15	Chr15	17000001	19725254
47	Chr15	19725255	46920638
48	Chr15	46920639	50696155
49	Chr15	50696156	59274182
50	Chr15	59274183	67634057
51	Chr15	67634058	101981188
52	Chr16	10000	36311158
CEN16	Chr16	36311159	38280682
53	Chr16	38280683	82083234
54	Chr16	82083235	84745736
55	Chr16	84745737	90228344
56	Chr17	60000	22813679
CEN17	Chr17	22813680	26885980
57	Chr17	26885981	83247440
58	Chr18	10000	15460899
CEN18	Chr18	15460900	20861206
59	Chr18	20861207	80263284
60	Chr19	60000	24498980
CEN19	Chr19	24498981	27190874
61	Chr19	27190875	58607615
62	Chr20	60000	26436232
CEN20	Chr20	26436233	30038348
63	Chr20	30038349	64334166
64	Chr21	5010000	10864560
CEN21	Chr21	10864561	12915808
65	Chr21	12915809	46699982
66	Chr22	10510000	12954788
CEN22	Chr22	12954789	15054318
67	Chr22	15054319	19022278
68	Chr22	19022279	21098156
69	Chr22	21098157	50808467
70	ChrX	10000	58605579
CENX	ChrX	58605580	62412542
71	ChrX	62412543	100150115
72	ChrX	100150116	100150116
73	ChrX	100150117	156030894
---
chromosome	KT	telo1_len	telo2_len
Chr1a	1+,CEN1+,2+,4+	10000	10000
Chr1b	1+,CEN1+,2+,3+,4+	10000	10000
Chr2a	5+,CEN2+,6+	10000	10000
Chr2b	5+,CEN2+,6+	10000	10000
Chr3a	7+,CEN3+,8+,9-,9+,10+	10000	60000
Chr3b	7+,CEN3+,8+,9+,10+	10000	60000
Chr4a	11+,CEN4+,12+	10000	10000
Chr4b	11+,CEN4+,12+	10000	10000
Chr5a	13+,CEN5+,14+,15-,16+	10000	60000
Chr5b	13+,CEN5+,14+,15+,16+	10000	60000
Chr6a	17+,CEN6+,18+,48+,20+	60000	60000
Chr6b	17+,CEN6+,18+,19+,20+	60000	60000
Chr7a	21+,CEN7+,22+	10000	10000
Chr7b	21+,CEN7+,22+	10000	10000
Chr8a	23+,CEN8+,24+,25+,26+,26-,25-,27+,28+	60000	60000
Chr8b	23+,CEN8+,24+,25+,26+,27+,28+,29+	60000	60000
Chr9a	30+,CEN9+,31+	10000	60000
Chr9b	30+,CEN9+,31+	10000	60000
Chr10a	32+,CEN10+,33+	10000	10000
Chr10b	32+,CEN10+,33+	10000	10000
Chr11a	34+,CEN11+,35+	60000	10000
Chr11b	34+,CEN11+,35+	60000	10000
Chr12a	36+,CEN12+,37+,38+,38+,39+	10000	10000
Chr12b	36+,CEN12+,37+,38+,39+	10000	10000
Chr13a	40+,CEN13+,41+	16000000	10000
Chr13b	40+,CEN13+,41+	16000000	10000
Chr14a	42+,CEN14+,43+,45+	16000000	160000
Chr14b	42+,CEN14+,43+,44+,45+	16000000	160000
Chr15a	46+,CEN15+,47+,19+,49+,50+,50+,51+	17000000	10000
Chr15b	46+,CEN15+,47+,48+,49+,50+,51+	17000000	10000
Chr16a	52+,CEN16+,53+,54+,54+,55+	10000	110000
Chr16b	52+,CEN16+,53+,54+,55+	10000	110000
Chr17a	56+,CEN17+,57+	60000	10000
Chr17b	56+,CEN17+,57+	60000	10000
Chr18a	58+,CEN18+,59+	10000	110000
Chr18b	58+,CEN18+,59+	10000	110000
Chr19a	60+,CEN19+,61+	60000	10000
Chr19b	60+,CEN19+,61+	60000	10000
Chr20a	62+,CEN20+,63+	60000	110000
Chr20b	62+,CEN20+,63+	60000	110000
Chr21a	64+,CEN21+,65+	5010000	10000
Chr21b	64+,CEN21+,65+	5010000	10000
Chr22a	66+,CEN22+,67+,68+,68+,69+	10510000	10000
Chr22b	66+,CEN22+,67+,68+,69+	10510000	10000
ChrXa	70+,CENX+,71+,44+,72+,73+	10000	10000
ChrXb	70+,CENX+,71+,72+,73+	10000	10000
---
initialization
	autosomes: ['Chr1', 'Chr2', 'Chr3', 'Chr4', 'Chr5', 'Chr6', 'Chr7', 'Chr8', 'Chr9', 'Chr10', 'Chr11', 'Chr12', 'Chr13', 'Chr14', 'Chr15', 'Chr16', 'Chr17', 'Chr18', 'Chr19', 'Chr20', 'Chr21', 'Chr22']
	autosomal copy number: 1
	sex chromosomes: ['ChrX']
block 1: 22q11_duplication
	tandem duplication on segments [68+], from Chr22a to Chr22a
block 2: random events
	balanced reciprocal translocation on segments [19+], from Chr6a to Chr15a
	balanced reciprocal translocation on segments [48+], from Chr15a to Chr6a
	tandem duplication on segments [50+], from Chr15a to Chr15a
	tandem duplication on segments [54+], from Chr16a to Chr16a
	left duplication inversion on segments [9+], from Chr3a to Chr3a
	tandem duplication on segments [38+], from Chr12a to Chr12a
	right duplication inversion on segments [25+,26+], from Chr8a to Chr8a
	inversion on segments [15+], from Chr5a to Chr5a
	deletion on segments [3+], from Chr1a to Chr1a
	nonreciprocal translocation on segments [44+], from Chr14a to ChrXa
	deletion on segments [29+], from Chr8a to Chr8a
