8/7/24 DL

Scripts to calculate compartment/cluster quality based on chromatin accessibility.
 
atacseq_chipseq_reads_coverage/
	Chromatin accessibility signal per 100kb

bed/
	Bed files containing 100kb genomic bins

cscore/
dchic/
pca/
tgif/
	Measuring compartment/cluster quality with SI, CH, DBI metrics within each
	method

figure_compartment_quality.py
	Compiling and visualzing compartment/cluster quality metrics across methods

compartment_quality_accessibility_CH.pdf
compartment_quality_accessibility_DBI.pdf
compartment_quality_accessibility_SI.pdf
	Output files of preceding script

