Type	Position	Nucl1	Freq1	Nucl2	Freq2	NumAs	NumCs	NumGs	NumTs	NumAligned	NumNaive
UNKNOWN	0	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	1	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	2	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	3	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	4	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	5	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	6	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	7	A	0.92	T	0.07	92	0	1	7	100	128414
UNKNOWN	8	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	9	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	10	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	11	G	0.9	A	0.1	10	0	90	0	100	128414
UNKNOWN	12	C	0.98	T	0.02	0	98	0	2	100	128414
UNKNOWN	13	A	0.98	G	0.02	98	0	2	0	100	128414
UNKNOWN	14	G	0.99	C	0.01	0	1	99	0	100	128414
UNKNOWN	15	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	16	A	0.97	G	0.03	97	0	3	0	100	128414
UNKNOWN	17	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	18	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	19	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	20	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	21	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	22	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	23	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	24	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	25	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	26	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	27	A	0.99	C	0.01	99	1	0	0	100	128414
UNKNOWN	28	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	29	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	30	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	31	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	32	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	33	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	34	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	35	G	0.99	T	0.01	0	0	99	1	100	128414
UNKNOWN	36	A	0.98	C	0.01	98	1	1	0	100	128414
UNKNOWN	37	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	38	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	39	A	0.93	C	0.07	93	7	0	0	100	128414
UNKNOWN	40	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	41	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	42	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	43	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	44	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	45	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	46	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	47	G	0.98	A	0.02	2	0	98	0	100	128414
UNKNOWN	48	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	49	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	50	A	0.97	G	0.02	97	1	2	0	100	128414
UNKNOWN	51	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	52	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	53	C	0.99	G	0.01	0	99	1	0	100	128414
UNKNOWN	54	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	55	C	0.99	A	0.01	1	99	0	0	100	128414
UNKNOWN	56	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	57	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	58	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	59	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	60	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	61	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	62	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	63	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	64	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	65	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	66	A	0.95	G	0.03	95	1	3	1	100	128414
UNKNOWN	67	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	68	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	69	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	70	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	71	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	72	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	73	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	74	T	0.99	A	0.01	1	0	0	99	100	128414
UNKNOWN	75	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	76	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	77	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	78	T	0.97	G	0.03	0	0	3	97	100	128414
UNKNOWN	79	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	80	A	0.93	C	0.06	93	6	0	1	100	128414
UNKNOWN	81	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	82	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	83	A	0.98	C	0.02	98	2	0	0	100	128414
UNKNOWN	84	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	85	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	86	A	0.97	G	0.02	97	1	2	0	100	128414
UNKNOWN	87	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	88	G	0.56	C	0.41	0	41	56	3	100	128414
UNKNOWN	89	C	0.97	G	0.02	0	97	2	1	100	128414
UNKNOWN	90	A	0.98	G	0.02	98	0	2	0	100	128414
UNKNOWN	91	G	0.96	A	0.02	2	2	96	0	100	128414
UNKNOWN	92	A	0.96	C	0.04	96	4	0	0	100	128414
UNKNOWN	93	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	94	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	95	T	0.99	G	0.01	0	0	1	99	100	128414
UNKNOWN	96	G	0.96	A	0.02	2	0	96	2	100	128414
UNKNOWN	97	G	0.9	A	0.06	6	1	90	3	100	128414
UNKNOWN	98	T	0.97	G	0.02	1	0	2	97	100	128414
UNKNOWN	99	A	0.97	G	0.03	97	0	3	0	100	128414
UNKNOWN	100	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	101	A	0.99	C	0.01	99	1	0	0	100	128414
UNKNOWN	102	C	0.97	T	0.03	0	97	0	3	100	128414
UNKNOWN	103	A	0.99	C	0.01	99	1	0	0	100	128414
UNKNOWN	104	C	0.98	T	0.02	0	98	0	2	100	128414
UNKNOWN	105	T	0.91	C	0.09	0	9	0	91	100	128414
UNKNOWN	106	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	107	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	108	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	109	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	110	C	0.99	G	0.01	0	99	1	0	100	128414
UNKNOWN	111	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	112	G	0.98	T	0.02	0	0	98	2	100	128414
UNKNOWN	113	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	114	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	115	A	0.99	C	0.01	99	1	0	0	100	128414
UNKNOWN	116	G	0.94	A	0.06	6	0	94	0	100	128414
UNKNOWN	117	G	0.93	A	0.06	6	0	93	1	100	128414
UNKNOWN	118	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	119	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	120	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	121	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	122	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	123	G	0.99	T	0.01	0	0	99	1	100	128414
UNKNOWN	124	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	125	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	126	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	127	A	0.99	T	0.01	99	0	0	1	100	128414
UNKNOWN	128	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	129	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	130	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	131	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	132	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	133	T	0.99	G	0.01	0	0	1	99	100	128414
UNKNOWN	134	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	135	G	0.97	C	0.03	0	3	97	0	100	128414
UNKNOWN	136	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	137	G	0.99	T	0.01	0	0	99	1	100	128414
UNKNOWN	138	T	0.98	C	0.02	0	2	0	98	100	128414
UNKNOWN	139	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	140	G	0.97	A	0.02	2	0	97	1	100	128414
UNKNOWN	141	C	0.98	T	0.01	0	98	1	1	100	128414
UNKNOWN	142	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	143	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	144	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	145	G	0.99	C	0.01	0	1	99	0	100	128414
UNKNOWN	146	G	0.5	T	0.49	1	0	50	49	100	128414
UNKNOWN	147	G	0.9	A	0.08	8	1	90	1	100	128414
UNKNOWN	148	A	0.97	G	0.02	97	0	2	1	100	128414
UNKNOWN	149	T	0.99	G	0.01	0	0	1	99	100	128414
UNKNOWN	150	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	151	T	0.99	G	0.01	0	0	1	99	100	128414
UNKNOWN	152	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	153	A	0.97	G	0.02	97	1	2	0	100	128414
UNKNOWN	154	G	0.95	A	0.03	3	1	95	1	100	128414
UNKNOWN	155	C	0.97	T	0.03	0	97	0	3	100	128414
UNKNOWN	156	A	0.97	G	0.03	97	0	3	0	100	128414
UNKNOWN	157	G	0.98	C	0.01	0	1	98	1	100	128414
UNKNOWN	158	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	159	A	0.52	G	0.48	52	0	48	0	100	128414
UNKNOWN	160	G	0.5	C	0.49	1	49	50	0	100	128414
UNKNOWN	161	T	0.51	A	0.49	49	0	0	51	100	128414
UNKNOWN	162	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	163	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	164	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	165	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	166	C	0.51	G	0.46	3	51	46	0	100	128414
UNKNOWN	167	A	0.51	C	0.43	51	43	1	5	100	128414
UNKNOWN	168	A	0.89	G	0.1	89	0	10	1	100	128414
UNKNOWN	169	C	0.97	T	0.02	1	97	0	2	100	128414
UNKNOWN	170	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	171	G	0.98	A	0.02	2	0	98	0	100	128414
UNKNOWN	172	T	0.48	G	0.44	5	3	44	48	100	128414
UNKNOWN	173	C	0.98	T	0.01	0	98	1	1	100	128414
UNKNOWN	174	T	0.98	C	0.02	0	2	0	98	100	128414
UNKNOWN	175	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	176	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	177	A	0.98	C	0.02	98	2	0	0	100	128414
UNKNOWN	178	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	179	C	0.92	T	0.08	0	92	0	8	100	128414
UNKNOWN	180	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	181	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	182	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	183	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	184	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	185	C	0.98	G	0.02	0	98	2	0	100	128414
UNKNOWN	186	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	187	T	1.0	A	0.0	0	0	0	100	100	128414
UNKNOWN	188	G	0.99	T	0.01	0	0	99	1	100	128414
UNKNOWN	189	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	190	A	0.99	C	0.01	99	1	0	0	100	128414
UNKNOWN	191	A	0.99	T	0.01	99	0	0	1	100	128414
UNKNOWN	192	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	193	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	194	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	195	C	0.99	G	0.01	0	99	1	0	100	128414
UNKNOWN	196	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	197	G	0.93	A	0.06	6	1	93	0	100	128414
UNKNOWN	198	C	0.96	T	0.04	0	96	0	4	100	128414
UNKNOWN	199	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	200	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	201	A	0.98	G	0.02	98	0	2	0	100	128414
UNKNOWN	202	G	0.99	T	0.01	0	0	99	1	100	128414
UNKNOWN	203	T	0.52	C	0.47	1	47	0	52	100	128414
UNKNOWN	204	A	0.98	C	0.01	98	1	0	1	100	128414
UNKNOWN	205	T	0.98	A	0.01	1	1	0	98	100	128414
UNKNOWN	206	C	0.99	A	0.01	1	99	0	0	100	128414
UNKNOWN	207	A	0.98	C	0.02	98	2	0	0	100	128414
UNKNOWN	208	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	209	C	0.98	A	0.01	1	98	0	1	100	128414
UNKNOWN	210	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	211	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	212	G	1.0	A	0.0	0	0	100	0	100	128414
UNKNOWN	213	G	0.95	A	0.05	5	0	95	0	100	128414
UNKNOWN	214	A	0.99	C	0.01	99	1	0	0	100	128414
UNKNOWN	215	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	216	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	217	A	0.98	C	0.01	98	1	1	0	100	128414
UNKNOWN	218	C	0.96	T	0.03	0	96	1	3	100	128414
UNKNOWN	219	T	0.98	C	0.02	0	2	0	98	100	128414
UNKNOWN	220	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	221	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	222	A	0.99	T	0.01	99	0	0	1	100	128414
UNKNOWN	223	A	0.98	G	0.02	98	0	2	0	100	128414
UNKNOWN	224	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	225	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	226	G	0.99	C	0.01	0	1	99	0	100	128414
UNKNOWN	227	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	228	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	229	A	1.0	C	0.0	100	0	0	0	100	128414
UNKNOWN	230	A	0.98	G	0.02	98	0	2	0	100	128414
UNKNOWN	231	G	0.93	C	0.04	2	4	93	1	100	128414
UNKNOWN	232	T	0.97	C	0.03	0	3	0	97	100	128414
UNKNOWN	233	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	234	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	235	C	0.98	T	0.01	0	98	1	1	100	128414
UNKNOWN	236	T	0.99	C	0.01	0	1	0	99	100	128414
UNKNOWN	237	C	0.99	T	0.01	0	99	0	1	100	128414
UNKNOWN	238	T	0.99	G	0.01	0	0	1	99	100	128414
UNKNOWN	239	G	0.91	A	0.08	8	0	91	1	100	128414
UNKNOWN	240	T	0.97	C	0.03	0	3	0	97	100	128414
UNKNOWN	241	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	242	A	0.98	C	0.01	98	1	1	0	100	128414
UNKNOWN	243	C	0.98	T	0.01	0	98	1	1	100	128414
UNKNOWN	244	T	0.98	G	0.02	0	0	2	98	100	128414
UNKNOWN	245	G	0.99	A	0.01	1	0	99	0	100	128414
UNKNOWN	246	A	0.99	G	0.01	99	0	1	0	100	128414
UNKNOWN	247	G	0.96	C	0.03	1	3	96	0	100	128414
UNKNOWN	248	C	0.97	A	0.01	1	97	1	1	100	128414
UNKNOWN	249	A	0.98	C	0.01	98	1	1	0	100	128414
UNKNOWN	250	G	0.98	A	0.01	1	1	98	0	100	128414
UNKNOWN	251	C	1.0	A	0.0	0	100	0	0	100	128414
UNKNOWN	252	C	0.97	G	0.02	0	97	2	1	100	128414
UNKNOWN	253	T	0.98	C	0.01	0	1	1	98	100	128414
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UNKNOWN	259	C	0.98	T	0.02	0	98	0	2	100	128414
UNKNOWN	260	T	0.98	G	0.02	0	0	2	98	100	128414
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UNKNOWN	262	A	0.96	C	0.02	96	2	2	0	100	128414
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UNKNOWN	264	G	0.97	A	0.02	2	1	97	0	100	128414
UNKNOWN	265	A	0.97	C	0.03	97	3	0	0	100	128414
UNKNOWN	266	C	0.94	G	0.03	1	94	3	2	100	128414
UNKNOWN	267	T	0.97	C	0.02	1	2	0	97	100	128414
UNKNOWN	268	C	0.97	A	0.02	2	97	0	1	100	128414
UNKNOWN	269	A	0.97	G	0.03	97	0	3	0	100	128414
UNKNOWN	270	G	0.96	C	0.02	0	2	96	2	100	128414
UNKNOWN	271	C	0.97	T	0.02	0	97	1	2	100	128414
UNKNOWN	272	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	273	A	0.96	C	0.02	96	2	2	0	100	128414
UNKNOWN	274	C	0.98	A	0.02	2	98	0	0	100	128414
UNKNOWN	275	A	0.95	T	0.02	95	1	2	2	100	128414
UNKNOWN	276	T	0.98	A	0.02	2	0	0	98	100	128414
UNKNOWN	277	A	0.89	G	0.06	89	3	6	2	100	128414
UNKNOWN	278	C	0.92	T	0.05	0	92	3	5	100	128414
UNKNOWN	279	T	0.96	A	0.02	2	1	1	96	100	128414
UNKNOWN	280	A	0.95	G	0.03	95	2	3	0	100	128414
UNKNOWN	281	C	0.96	T	0.03	1	96	0	3	100	128414
UNKNOWN	282	T	0.93	C	0.03	2	3	2	93	100	128414
