- _ -

• __add__() : RSEntry.RSCollection , RSEntry.RSEntry , RSEntry.RSEntry.RSVar , SlimRSCollection.BitRSCollection
• __eq__() : RSEntry.RSCollection , RSEntry.RSEntry , RSEntry.RSEntry.RSVar , SlimRSCollection.BitRSCollection
• __getitem__() : RSEntry.RSCollection , RSEntry.RSEntry , SlimRSCollection.BitRSCollection
• __iadd__() : RSEntry.RSCollection , RSEntry.RSEntry , RSEntry.RSEntry.RSVar , SlimRSCollection.BitRSCollection
• __init__() : RSEntry.RSEntry , RSEntry.RSEntry.RSVar
• __len__() : RSEntry.RSCollection , RSEntry.RSEntry , SlimRSCollection.BitRSCollection
• __repr__() : RSEntry.RSCollection , RSEntry.RSEntry , RSEntry.RSEntry.RSVar
• __str__() : RSEntry.RSCollection , RSEntry.RSEntry , RSEntry.RSEntry.RSVar

- a -

• add_entry() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• add_entry_from_args() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• add_entry_line() : SlimRSCollection.BitRSCollection
• add_var() : RSEntry.RSEntry
• add_var_from_args() : RSEntry.RSEntry
• af() : RSEntry.RSEntry.RSVar
• all_vars_empty() : RSEntry.RSEntry

- c -

• calc_afs() : RSEntry.RSEntry.RSVar
• calc_pop_afs() : RSEntry.RSEntry.RSVar
• chrom_to_int() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection

- d -

• decode_bit() : SlimRSCollection.BitRSCollection
• dump() : RSEntry.RSCollection
• dump_chrs() : RSEntry.RSCollection
• dump_full() : RSEntry.RSCollection
• dump_vcf() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection

- e -

• encode_bit() : SlimRSCollection.BitRSCollection

- f -

• filter_vcf() : SlimRSCollection.BitRSCollection
• from_1000gp() : RSEntry.RSCollection
• from_dbsnp() : RSEntry.RSCollection
• from_gnomad() : RSEntry.RSCollection

- g -

• get_by_chr() : RSEntry.RSCollection
• get_by_chr_pos() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• get_by_rsid() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• get_chrom_from_filename() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• get_major() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• get_major_alleles() : RSEntry.RSEntry
• get_major_alleles_pop() : RSEntry.RSEntry

- i -

• is_empty() : RSEntry.RSEntry.RSVar
• is_major() : RSEntry.RSEntry.RSVar

- l -

• load_from_file_by_chr_pos() : RSEntry.RSCollection
• load_from_file_by_rsid() : RSEntry.RSCollection
• load_from_file_full() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• load_from_file_pop() : SlimRSCollection.BitRSCollection
• load_from_file_pops() : RSEntry.RSCollection

- m -

• make_chunk_idx_dict() : RSEntry.RSCollection
• merge_files() : RSEntry.RSCollection

- o -

• open() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection

- p -

• parse_file_line() : RSEntry.RSCollection
• pick_major_allele() : RSEntry.RSEntry
• pop_af() : RSEntry.RSEntry.RSVar

- s -

• sort_rsidx() : RSEntry.RSCollection , SlimRSCollection.BitRSCollection
• sort_rsidx_line() : RSEntry.RSCollection

- t -

• to_vcf() : RSEntry.RSEntry

- v -

• var_code() : RSEntry.RSEntry.RSVar
• var_list_to_vcf() : SlimRSCollection.BitRSCollection