diamond v0.8.16.78 | by Benjamin Buchfink <buchfink@gmail.com>
Check http://github.com/bbuchfink/diamond for updates.

#CPU threads: 1
Scoring parameters: (Matrix=blosum62 Lambda=0.267 K=0.041 Penalties=11/1)
#Target sequences to report alignments for: 1
Temporary directory: output_1014.2
Opening the database...  [0.066297s]
Opening the input file...  [0.13727s]
Opening the output file...  [0.002326s]
Loading query sequences...  [68.607s]
Running complexity filter...  [732.078s]
Building query histograms...  [39.0796s]
Allocating buffers...  [4.2e-05s]
Loading reference sequences...  [0.162606s]
Building reference histograms...  [0.233889s]
Allocating buffers...  [2.2e-05s]
Initializing temporary storage...  [0.024255s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 0.
Building reference index...  [0.131795s]
Building query index...  [30.8093s]
Building seed filter...  [0.011185s]
Searching alignments...  [2.90099s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 1.
Building reference index...  [0.145209s]
Building query index...  [33.1922s]
Building seed filter...  [0.010739s]
Searching alignments...  [2.80448s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 2.
Building reference index...  [0.149022s]
Building query index...  [34.4798s]
Building seed filter...  [0.011372s]
Searching alignments...  [2.79366s]
Processing query chunk 0, reference chunk 0, shape 0, index chunk 3.
Building reference index...  [0.131293s]
Building query index...  [30.3785s]
Building seed filter...  [0.011372s]
Searching alignments...  [2.80036s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 0.
Building reference index...  [0.128915s]
Building query index...  [25.7737s]
Building seed filter...  [0.010897s]
Searching alignments...  [2.50988s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 1.
Building reference index...  [0.143263s]
Building query index...  [28.1393s]
Building seed filter...  [0.010927s]
Searching alignments...  [2.59031s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 2.
Building reference index...  [0.147096s]
Building query index...  [29.0413s]
Building seed filter...  [0.010934s]
Searching alignments...  [2.5981s]
Processing query chunk 0, reference chunk 0, shape 1, index chunk 3.
Building reference index...  [0.127901s]
Building query index...  [25.6309s]
Building seed filter...  [0.010844s]
Searching alignments...  [2.52578s]
Processing query chunk 0, reference chunk 0, shape 2, index chunk 0.
Building reference index...  [0.12532s]
Building query index...  [19.6503s]
Building seed filter...  [0.010694s]
Searching alignments...  [2.0353s]
Processing query chunk 0, reference chunk 0, shape 2, index chunk 1.
Building reference index...  [0.141883s]
Building query index...  [21.5551s]
Building seed filter...  [0.010898s]
Searching alignments...  [2.16623s]
Processing query chunk 0, reference chunk 0, shape 2, index chunk 2.
Building reference index...  [0.144869s]
Building query index...  [22.1677s]
Building seed filter...  [0.010752s]
Searching alignments...  [2.17341s]
Processing query chunk 0, reference chunk 0, shape 2, index chunk 3.
Building reference index...  [0.125276s]
Building query index...  [19.5584s]
Building seed filter...  [0.010771s]
Searching alignments...  [2.0276s]
Processing query chunk 0, reference chunk 0, shape 3, index chunk 0.
Building reference index...  [0.124812s]
Building query index...  [16.8561s]
Building seed filter...  [0.010662s]
Searching alignments...  [1.92611s]
Processing query chunk 0, reference chunk 0, shape 3, index chunk 1.
Building reference index...  [0.138834s]
Building query index...  [18.3723s]
Building seed filter...  [0.010545s]
Searching alignments...  [1.93203s]
Processing query chunk 0, reference chunk 0, shape 3, index chunk 2.
Building reference index...  [0.143532s]
Building query index...  [18.9336s]
Building seed filter...  [0.010694s]
Searching alignments...  [1.92148s]
Processing query chunk 0, reference chunk 0, shape 3, index chunk 3.
Building reference index...  [0.124023s]
Building query index...  [16.7856s]
Building seed filter...  [0.010311s]
Searching alignments...  [1.89043s]
Deallocating buffers...  [3e-06s]
Computing alignments...  [30.1791s]
Deallocating reference...  [0.000371s]
Loading reference sequences...  [0.000193s]
Deallocating buffers...  [0.226022s]
Deallocating queries...  [0.594251s]
Loading query sequences...  [63.3171s]
Running complexity filter...  [719.867s]
Building query histograms...  [39.2276s]
Allocating buffers...  [4.8e-05s]
Loading reference sequences...  [0.007815s]
Building reference histograms...  [0.233937s]
Allocating buffers...  [2.2e-05s]
Initializing temporary storage...  [0.020583s]
Processing query chunk 1, reference chunk 0, shape 0, index chunk 0.
Building reference index...  [0.131771s]
Building query index...  [31.3926s]
Building seed filter...  [0.011145s]
Searching alignments...  [3.02741s]
Processing query chunk 1, reference chunk 0, shape 0, index chunk 1.
Building reference index...  [0.145691s]
Building query index...  [33.461s]
Building seed filter...  [0.011103s]
Searching alignments...  [2.92059s]
Processing query chunk 1, reference chunk 0, shape 0, index chunk 2.
Building reference index...  [0.152093s]
Building query index...  [34.5903s]
Building seed filter...  [0.011017s]
Searching alignments...  [2.91481s]
Processing query chunk 1, reference chunk 0, shape 0, index chunk 3.
Building reference index...  [0.131089s]
Building query index...  [30.5248s]
Building seed filter...  [0.011148s]
Searching alignments...  [3.04496s]
Processing query chunk 1, reference chunk 0, shape 1, index chunk 0.
Building reference index...  [0.128358s]
Building query index...  [25.8173s]
Building seed filter...  [0.01094s]
Searching alignments...  [2.59076s]
Processing query chunk 1, reference chunk 0, shape 1, index chunk 1.
Building reference index...  [0.14345s]
Building query index...  [28.2412s]
Building seed filter...  [0.010988s]
Searching alignments...  [2.54902s]
Processing query chunk 1, reference chunk 0, shape 1, index chunk 2.
Building reference index...  [0.148623s]
Building query index...  [29.2855s]
Building seed filter...  [0.010778s]
Searching alignments...  [2.53587s]
Processing query chunk 1, reference chunk 0, shape 1, index chunk 3.
Building reference index...  [0.130254s]
Building query index...  [25.8613s]
Building seed filter...  [0.010778s]
Searching alignments...  [2.59135s]
Processing query chunk 1, reference chunk 0, shape 2, index chunk 0.
Building reference index...  [0.12624s]
Building query index...  [19.7011s]
Building seed filter...  [0.010706s]
Searching alignments...  [2.1421s]
Processing query chunk 1, reference chunk 0, shape 2, index chunk 1.
Building reference index...  [0.141662s]
Building query index...  [21.6119s]
Building seed filter...  [0.010637s]
Searching alignments...  [2.06644s]
Processing query chunk 1, reference chunk 0, shape 2, index chunk 2.
Building reference index...  [0.144484s]
Building query index...  [22.362s]
Building seed filter...  [0.010996s]
Searching alignments...  [2.13698s]
Processing query chunk 1, reference chunk 0, shape 2, index chunk 3.
Building reference index...  [0.128336s]
Building query index...  [19.741s]
Building seed filter...  [0.010688s]
Searching alignments...  [2.147s]
Processing query chunk 1, reference chunk 0, shape 3, index chunk 0.
Building reference index...  [0.126326s]
Building query index...  [16.9288s]
Building seed filter...  [0.010273s]
Searching alignments...  [1.89327s]
Processing query chunk 1, reference chunk 0, shape 3, index chunk 1.
Building reference index...  [0.139057s]
Building query index...  [18.4462s]
Building seed filter...  [0.010228s]
Searching alignments...  [1.92139s]
Processing query chunk 1, reference chunk 0, shape 3, index chunk 2.
Building reference index...  [0.145156s]
Building query index...  [19.0878s]
Building seed filter...  [0.010528s]
Searching alignments...  [1.97539s]
Processing query chunk 1, reference chunk 0, shape 3, index chunk 3.
Building reference index...  [0.123735s]
Building query index...  [16.7514s]
Building seed filter...  [0.010565s]
Searching alignments...  [1.89543s]
Deallocating buffers...  [6e-06s]
Computing alignments...  [31.0271s]
Deallocating reference...  [0.000367s]
Loading reference sequences...  [0.000206s]
Deallocating buffers...  [0.238831s]
Deallocating queries...  [0.613943s]
Loading query sequences...  [65.7462s]
Running complexity filter...  [706.178s]
Building query histograms...  [39.3835s]
Allocating buffers...  [4.1e-05s]
Loading reference sequences...  [0.007357s]
Building reference histograms...  [0.234444s]
Allocating buffers...  [2.2e-05s]
Initializing temporary storage...  [0.019431s]
Processing query chunk 2, reference chunk 0, shape 0, index chunk 0.
Building reference index...  [0.132621s]
Building query index...  [31.1855s]
Building seed filter...  [0.011226s]
Searching alignments...  [2.98932s]
Processing query chunk 2, reference chunk 0, shape 0, index chunk 1.
Building reference index...  [0.145752s]
Building query index...  [33.6584s]
Building seed filter...  [0.011115s]
Searching alignments...  [2.84394s]
Processing query chunk 2, reference chunk 0, shape 0, index chunk 2.
Building reference index...  [0.149183s]
Building query index...  [34.8613s]
Building seed filter...  [0.011215s]
Searching alignments...  [2.84934s]
Processing query chunk 2, reference chunk 0, shape 0, index chunk 3.
Building reference index...  [0.131206s]
Building query index...  [30.7545s]
Building seed filter...  [0.011316s]
Searching alignments...  [2.84989s]
Processing query chunk 2, reference chunk 0, shape 1, index chunk 0.
Building reference index...  [0.129172s]
Building query index...  [26.0794s]
Building seed filter...  [0.01061s]
Searching alignments...  [2.58755s]
Processing query chunk 2, reference chunk 0, shape 1, index chunk 1.
Building reference index...  [0.143623s]
Building query index...  [28.3707s]
Building seed filter...  [0.010783s]
Searching alignments...  [2.61844s]
Processing query chunk 2, reference chunk 0, shape 1, index chunk 2.
Building reference index...  [0.147768s]
Building query index...  [29.3773s]
Building seed filter...  [0.010977s]
Searching alignments...  [2.65479s]
Processing query chunk 2, reference chunk 0, shape 1, index chunk 3.
Building reference index...  [0.12809s]
Building query index...  [25.8261s]
Building seed filter...  [0.010937s]
Searching alignments...  [2.5843s]
Processing query chunk 2, reference chunk 0, shape 2, index chunk 0.
Building reference index...  [0.125375s]
Building query index...  [19.7831s]
Building seed filter...  [0.010899s]
Searching alignments...  [2.08225s]
Processing query chunk 2, reference chunk 0, shape 2, index chunk 1.
Building reference index...  [0.142623s]
Building query index...  [21.7315s]
Building seed filter...  [0.010861s]
Searching alignments...  [2.22345s]
Processing query chunk 2, reference chunk 0, shape 2, index chunk 2.
Building reference index...  [0.145484s]
Building query index...  [22.3587s]
Building seed filter...  [0.01097s]
Searching alignments...  [2.22965s]
Processing query chunk 2, reference chunk 0, shape 2, index chunk 3.
Building reference index...  [0.125589s]
Building query index...  [19.7316s]
Building seed filter...  [0.010651s]
Searching alignments...  [2.20994s]
Processing query chunk 2, reference chunk 0, shape 3, index chunk 0.
Building reference index...  [0.124452s]
Building query index...  [16.8057s]
Building seed filter...  [0.010688s]
Searching alignments...  [1.96625s]
Processing query chunk 2, reference chunk 0, shape 3, index chunk 1.
Building reference index...  [0.13904s]
Building query index...  [18.4592s]
Building seed filter...  [0.010626s]
Searching alignments...  [1.97184s]
Processing query chunk 2, reference chunk 0, shape 3, index chunk 2.
Building reference index...  [0.144544s]
Building query index...  [19.0908s]
Building seed filter...  [0.010699s]
Searching alignments...  [1.96991s]
Processing query chunk 2, reference chunk 0, shape 3, index chunk 3.
Building reference index...  [0.124559s]
Building query index...  [16.9173s]
Building seed filter...  [0.010492s]
Searching alignments...  [1.94045s]
Deallocating buffers...  [4e-06s]
Computing alignments...  [32.2827s]
Deallocating reference...  [0.00037s]
Loading reference sequences...  [0.000199s]
Deallocating buffers...  [0.229492s]
Deallocating queries...  [0.601431s]
Loading query sequences...  [63.4662s]
Running complexity filter...  [714.435s]
Building query histograms...  [39.2509s]
Allocating buffers...  [5.8e-05s]
Loading reference sequences...  [0.007172s]
Building reference histograms...  [0.23452s]
Allocating buffers...  [2.2e-05s]
Initializing temporary storage...  [0.031532s]
Processing query chunk 3, reference chunk 0, shape 0, index chunk 0.
Building reference index...  [0.132024s]
Building query index...  [31.7111s]
Building seed filter...  [0.011298s]
Searching alignments...  [3.03832s]
Processing query chunk 3, reference chunk 0, shape 0, index chunk 1.
Building reference index...  [0.145498s]
Building query index...  [33.5965s]
Building seed filter...  [0.011017s]
Searching alignments...  [2.92722s]
Processing query chunk 3, reference chunk 0, shape 0, index chunk 2.
Building reference index...  [0.149924s]
Building query index...  [34.7443s]
Building seed filter...  [0.010847s]
Searching alignments...  [2.89969s]
Processing query chunk 3, reference chunk 0, shape 0, index chunk 3.
Building reference index...  [0.131075s]
Building query index...  [30.6063s]
Building seed filter...  [0.011405s]
Searching alignments...  [2.99858s]
Processing query chunk 3, reference chunk 0, shape 1, index chunk 0.
Building reference index...  [0.128274s]
Building query index...  [25.9014s]
Building seed filter...  [0.010616s]
Searching alignments...  [2.48972s]
Processing query chunk 3, reference chunk 0, shape 1, index chunk 1.
Building reference index...  [0.146479s]
Building query index...  [28.4277s]
Building seed filter...  [0.011239s]
Searching alignments...  [2.55034s]
Processing query chunk 3, reference chunk 0, shape 1, index chunk 2.
Building reference index...  [0.148755s]
Building query index...  [29.3583s]
Building seed filter...  [0.010773s]
Searching alignments...  [2.56147s]
Processing query chunk 3, reference chunk 0, shape 1, index chunk 3.
Building reference index...  [0.12915s]
Building query index...  [25.9166s]
Building seed filter...  [0.01107s]
Searching alignments...  [2.50893s]
Processing query chunk 3, reference chunk 0, shape 2, index chunk 0.
Building reference index...  [0.127054s]
Building query index...  [19.8286s]
Building seed filter...  [0.010594s]
Searching alignments...  [2.12956s]
Processing query chunk 3, reference chunk 0, shape 2, index chunk 1.
Building reference index...  [0.142127s]
Building query index...  [21.6558s]
Building seed filter...  [0.010844s]
Searching alignments...  [2.08717s]
Processing query chunk 3, reference chunk 0, shape 2, index chunk 2.
Building reference index...  [0.144946s]
Building query index...  [22.4378s]
Building seed filter...  [0.010893s]
Searching alignments...  [2.12303s]
Processing query chunk 3, reference chunk 0, shape 2, index chunk 3.
Building reference index...  [0.125246s]
Building query index...  [19.8078s]
Building seed filter...  [0.010814s]
Searching alignments...  [2.14355s]
Processing query chunk 3, reference chunk 0, shape 3, index chunk 0.
Building reference index...  [0.125134s]
Building query index...  [16.9527s]
Building seed filter...  [0.01079s]
Searching alignments... 