# getData

`getData.Rd`

Function to clean cnv files

    getData(
      ...,

        infile = "/Users/Nick_curie/Desktop/parserTest/filtered_231018/summary/merged/all_bps_mech.txt",
      attach_info = system.file("extdata", "samples_names_conversion.txt", package =
        "svBreaks"),
      gene_lengths_file = system.file("extdata", "gene_lengths.txt", package = "svBreaks"),
      expression_data = system.file("extdata", "isc_genes_rnaSeq.txt", package =
        "svBreaks"),
      expression_source = "flygut"
    )

## Arguments

infile | File to process [Required]

## Value

Dataframe