bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941501_4lanes/GB941501_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941501_4lanes/GB941501_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941502_4lanes/GB941502_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941502_4lanes/GB941502_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941503_4lanes/GB941503_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941503_4lanes/GB941503_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941504_4lanes/GB941504_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941504_4lanes/GB941504_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941505_4lanes/GB941505_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941505_4lanes/GB941505_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941506_4lanes/GB941506_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941506_4lanes/GB941506_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941507_4lanes/GB941507_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941507_4lanes/GB941507_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941508_4lanes/GB941508_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941508_4lanes/GB941508_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941509_4lanes/GB941509_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941509_4lanes/GB941509_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941510_4lanes/GB941510_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941510_4lanes/GB941510_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941511_4lanes/GB941511_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941511_4lanes/GB941511_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941512_4lanes/GB941512_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941512_4lanes/GB941512_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941513_4lanes/GB941513_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941513_4lanes/GB941513_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941514_4lanes/GB941514_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941514_4lanes/GB941514_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941515_4lanes/GB941515_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941515_4lanes/GB941515_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941516_4lanes/GB941516_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941516_4lanes/GB941516_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941517_4lanes/GB941517_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941517_4lanes/GB941517_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941518_4lanes/GB941518_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941518_4lanes/GB941518_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941519_4lanes/GB941519_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941519_4lanes/GB941519_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941520_4lanes/GB941520_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941520_4lanes/GB941520_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941521_4lanes/GB941521_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941521_4lanes/GB941521_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941522_4lanes/GB941522_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941522_4lanes/GB941522_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941523_4lanes/GB941523_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941523_4lanes/GB941523_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941524_4lanes/GB941524_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941524_4lanes/GB941524_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941525_4lanes/GB941525_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941525_4lanes/GB941525_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941526_4lanes/GB941526_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941526_4lanes/GB941526_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941527_4lanes/GB941527_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941527_4lanes/GB941527_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941528_4lanes/GB941528_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941528_4lanes/GB941528_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941529_4lanes/GB941529_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941529_4lanes/GB941529_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941530_4lanes/GB941530_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941530_4lanes/GB941530_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941531_4lanes/GB941531_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941531_4lanes/GB941531_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941532_4lanes/GB941532_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941532_4lanes/GB941532_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941533_4lanes/GB941533_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941533_4lanes/GB941533_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941534_4lanes/GB941534_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941534_4lanes/GB941534_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941535_4lanes/GB941535_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941535_4lanes/GB941535_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941536_4lanes/GB941536_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941536_4lanes/GB941536_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941537_4lanes/GB941537_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941537_4lanes/GB941537_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941538_4lanes/GB941538_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941538_4lanes/GB941538_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941539_4lanes/GB941539_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941539_4lanes/GB941539_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941540_4lanes/GB941540_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941540_4lanes/GB941540_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941541_4lanes/GB941541_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941541_4lanes/GB941541_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941542_4lanes/GB941542_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941542_4lanes/GB941542_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941543_4lanes/GB941543_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941543_4lanes/GB941543_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941544_4lanes/GB941544_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941544_4lanes/GB941544_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941545_4lanes/GB941545_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941545_4lanes/GB941545_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941546_4lanes/GB941546_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941546_4lanes/GB941546_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941547_4lanes/GB941547_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941547_4lanes/GB941547_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941548_4lanes/GB941548_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941548_4lanes/GB941548_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941549_4lanes/GB941549_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941549_4lanes/GB941549_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941550_4lanes/GB941550_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941550_4lanes/GB941550_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941551_4lanes/GB941551_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941551_4lanes/GB941551_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941552_4lanes/GB941552_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941552_4lanes/GB941552_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941553_4lanes/GB941553_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941553_4lanes/GB941553_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941554_4lanes/GB941554_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941554_4lanes/GB941554_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941555_4lanes/GB941555_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941555_4lanes/GB941555_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941556_4lanes/GB941556_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941556_4lanes/GB941556_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941557_4lanes/GB941557_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941557_4lanes/GB941557_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941558_4lanes/GB941558_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941558_4lanes/GB941558_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941559_4lanes/GB941559_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941559_4lanes/GB941559_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941560_4lanes/GB941560_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941560_4lanes/GB941560_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941561_4lanes/GB941561_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941561_4lanes/GB941561_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941562_4lanes/GB941562_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941562_4lanes/GB941562_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941563_4lanes/GB941563_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941563_4lanes/GB941563_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941564_4lanes/GB941564_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941564_4lanes/GB941564_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941565_4lanes/GB941565_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941565_4lanes/GB941565_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941566_4lanes/GB941566_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941566_4lanes/GB941566_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941567_4lanes/GB941567_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941567_4lanes/GB941567_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941568_4lanes/GB941568_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941568_4lanes/GB941568_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941569_4lanes/GB941569_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941569_4lanes/GB941569_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941570_4lanes/GB941570_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941570_4lanes/GB941570_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941571_4lanes/GB941571_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941571_4lanes/GB941571_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941572_4lanes/GB941572_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941572_4lanes/GB941572_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941573_4lanes/GB941573_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941573_4lanes/GB941573_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941574_4lanes/GB941574_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941574_4lanes/GB941574_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941575_4lanes/GB941575_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941575_4lanes/GB941575_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941576_4lanes/GB941576_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941576_4lanes/GB941576_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941577_4lanes/GB941577_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941577_4lanes/GB941577_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941578_4lanes/GB941578_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941578_4lanes/GB941578_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941579_4lanes/GB941579_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941579_4lanes/GB941579_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941580_4lanes/GB941580_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941580_4lanes/GB941580_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941581_4lanes/GB941581_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941581_4lanes/GB941581_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941582_4lanes/GB941582_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941582_4lanes/GB941582_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941583_4lanes/GB941583_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941583_4lanes/GB941583_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941584_4lanes/GB941584_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941584_4lanes/GB941584_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941585_4lanes/GB941585_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941585_4lanes/GB941585_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941586_4lanes/GB941586_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941586_4lanes/GB941586_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941587_4lanes/GB941587_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941587_4lanes/GB941587_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941588_4lanes/GB941588_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941588_4lanes/GB941588_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941589_4lanes/GB941589_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941589_4lanes/GB941589_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941590_4lanes/GB941590_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941590_4lanes/GB941590_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941591_4lanes/GB941591_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941591_4lanes/GB941591_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941592_4lanes/GB941592_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941592_4lanes/GB941592_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941593_4lanes/GB941593_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941593_4lanes/GB941593_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941594_4lanes/GB941594_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941594_4lanes/GB941594_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941595_4lanes/GB941595_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941595_4lanes/GB941595_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941596_4lanes/GB941596_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941596_4lanes/GB941596_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941601_4lanes/GB941601_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941601_4lanes/GB941601_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941602_4lanes/GB941602_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941602_4lanes/GB941602_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941603_4lanes/GB941603_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941603_4lanes/GB941603_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941604_4lanes/GB941604_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941604_4lanes/GB941604_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941605_4lanes/GB941605_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941605_4lanes/GB941605_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941606_4lanes/GB941606_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941606_4lanes/GB941606_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941607_4lanes/GB941607_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941607_4lanes/GB941607_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941608_4lanes/GB941608_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941608_4lanes/GB941608_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941609_4lanes/GB941609_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941609_4lanes/GB941609_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941610_4lanes/GB941610_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941610_4lanes/GB941610_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941611_4lanes/GB941611_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941611_4lanes/GB941611_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941612_4lanes/GB941612_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941612_4lanes/GB941612_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941613_4lanes/GB941613_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941613_4lanes/GB941613_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941614_4lanes/GB941614_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941614_4lanes/GB941614_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941615_4lanes/GB941615_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941615_4lanes/GB941615_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941616_4lanes/GB941616_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941616_4lanes/GB941616_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941617_4lanes/GB941617_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941617_4lanes/GB941617_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941618_4lanes/GB941618_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941618_4lanes/GB941618_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941619_4lanes/GB941619_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941619_4lanes/GB941619_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941620_4lanes/GB941620_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941620_4lanes/GB941620_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941621_4lanes/GB941621_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941621_4lanes/GB941621_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941622_4lanes/GB941622_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941622_4lanes/GB941622_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941623_4lanes/GB941623_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941623_4lanes/GB941623_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941624_4lanes/GB941624_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941624_4lanes/GB941624_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941625_4lanes/GB941625_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941625_4lanes/GB941625_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941626_4lanes/GB941626_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941626_4lanes/GB941626_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941627_4lanes/GB941627_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941627_4lanes/GB941627_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941628_4lanes/GB941628_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941628_4lanes/GB941628_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941629_4lanes/GB941629_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941629_4lanes/GB941629_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941630_4lanes/GB941630_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941630_4lanes/GB941630_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941631_4lanes/GB941631_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941631_4lanes/GB941631_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941632_4lanes/GB941632_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941632_4lanes/GB941632_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941633_4lanes/GB941633_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941633_4lanes/GB941633_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941634_4lanes/GB941634_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941634_4lanes/GB941634_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941635_4lanes/GB941635_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941635_4lanes/GB941635_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941636_4lanes/GB941636_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941636_4lanes/GB941636_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941637_4lanes/GB941637_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941637_4lanes/GB941637_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941638_4lanes/GB941638_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941638_4lanes/GB941638_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941639_4lanes/GB941639_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941639_4lanes/GB941639_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941640_4lanes/GB941640_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941640_4lanes/GB941640_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941641_4lanes/GB941641_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941641_4lanes/GB941641_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941642_4lanes/GB941642_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941642_4lanes/GB941642_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941643_4lanes/GB941643_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941643_4lanes/GB941643_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941644_4lanes/GB941644_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941644_4lanes/GB941644_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941645_4lanes/GB941645_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941645_4lanes/GB941645_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941646_4lanes/GB941646_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941646_4lanes/GB941646_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941647_4lanes/GB941647_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941647_4lanes/GB941647_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941648_4lanes/GB941648_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941648_4lanes/GB941648_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941649_4lanes/GB941649_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941649_4lanes/GB941649_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941650_4lanes/GB941650_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941650_4lanes/GB941650_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941651_4lanes/GB941651_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941651_4lanes/GB941651_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941652_4lanes/GB941652_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941652_4lanes/GB941652_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941653_4lanes/GB941653_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941653_4lanes/GB941653_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941654_4lanes/GB941654_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941654_4lanes/GB941654_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941655_4lanes/GB941655_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941655_4lanes/GB941655_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941656_4lanes/GB941656_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941656_4lanes/GB941656_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941657_4lanes/GB941657_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941657_4lanes/GB941657_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941658_4lanes/GB941658_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941658_4lanes/GB941658_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941659_4lanes/GB941659_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941659_4lanes/GB941659_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941660_4lanes/GB941660_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941660_4lanes/GB941660_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941661_4lanes/GB941661_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941661_4lanes/GB941661_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941662_4lanes/GB941662_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941662_4lanes/GB941662_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941663_4lanes/GB941663_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941663_4lanes/GB941663_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941664_4lanes/GB941664_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941664_4lanes/GB941664_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941665_4lanes/GB941665_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941665_4lanes/GB941665_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941666_4lanes/GB941666_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941666_4lanes/GB941666_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941667_4lanes/GB941667_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941667_4lanes/GB941667_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941668_4lanes/GB941668_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941668_4lanes/GB941668_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941669_4lanes/GB941669_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941669_4lanes/GB941669_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941670_4lanes/GB941670_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941670_4lanes/GB941670_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941671_4lanes/GB941671_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941671_4lanes/GB941671_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941672_4lanes/GB941672_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941672_4lanes/GB941672_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941673_4lanes/GB941673_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941673_4lanes/GB941673_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941674_4lanes/GB941674_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941674_4lanes/GB941674_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941675_4lanes/GB941675_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941675_4lanes/GB941675_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941676_4lanes/GB941676_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941676_4lanes/GB941676_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941677_4lanes/GB941677_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941677_4lanes/GB941677_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941678_4lanes/GB941678_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941678_4lanes/GB941678_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941679_4lanes/GB941679_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941679_4lanes/GB941679_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941680_4lanes/GB941680_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941680_4lanes/GB941680_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941681_4lanes/GB941681_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941681_4lanes/GB941681_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941682_4lanes/GB941682_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941682_4lanes/GB941682_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941683_4lanes/GB941683_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941683_4lanes/GB941683_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941684_4lanes/GB941684_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941684_4lanes/GB941684_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941685_4lanes/GB941685_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941685_4lanes/GB941685_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941686_4lanes/GB941686_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941686_4lanes/GB941686_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941687_4lanes/GB941687_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941687_4lanes/GB941687_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941688_4lanes/GB941688_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941688_4lanes/GB941688_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941689_4lanes/GB941689_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941689_4lanes/GB941689_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941690_4lanes/GB941690_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941690_4lanes/GB941690_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941691_4lanes/GB941691_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941691_4lanes/GB941691_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941692_4lanes/GB941692_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941692_4lanes/GB941692_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941693_4lanes/GB941693_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941693_4lanes/GB941693_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941694_4lanes/GB941694_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941694_4lanes/GB941694_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941695_4lanes/GB941695_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941695_4lanes/GB941695_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941696_4lanes/GB941696_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941696_4lanes/GB941696_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941701_4lanes/GB941701_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941701_4lanes/GB941701_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941702_4lanes/GB941702_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941702_4lanes/GB941702_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941703_4lanes/GB941703_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941703_4lanes/GB941703_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941704_4lanes/GB941704_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941704_4lanes/GB941704_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941705_4lanes/GB941705_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941705_4lanes/GB941705_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941706_4lanes/GB941706_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941706_4lanes/GB941706_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941707_4lanes/GB941707_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941707_4lanes/GB941707_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941708_4lanes/GB941708_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941708_4lanes/GB941708_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941709_4lanes/GB941709_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941709_4lanes/GB941709_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941710_4lanes/GB941710_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941710_4lanes/GB941710_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941711_4lanes/GB941711_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941711_4lanes/GB941711_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941712_4lanes/GB941712_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941712_4lanes/GB941712_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941713_4lanes/GB941713_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941713_4lanes/GB941713_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941714_4lanes/GB941714_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941714_4lanes/GB941714_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941715_4lanes/GB941715_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941715_4lanes/GB941715_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941716_4lanes/GB941716_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941716_4lanes/GB941716_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941717_4lanes/GB941717_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941717_4lanes/GB941717_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941718_4lanes/GB941718_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941718_4lanes/GB941718_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941719_4lanes/GB941719_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941719_4lanes/GB941719_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941720_4lanes/GB941720_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941720_4lanes/GB941720_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941721_4lanes/GB941721_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941721_4lanes/GB941721_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941722_4lanes/GB941722_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941722_4lanes/GB941722_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941723_4lanes/GB941723_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941723_4lanes/GB941723_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941724_4lanes/GB941724_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941724_4lanes/GB941724_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941725_4lanes/GB941725_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941725_4lanes/GB941725_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941726_4lanes/GB941726_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941726_4lanes/GB941726_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941727_4lanes/GB941727_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941727_4lanes/GB941727_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941728_4lanes/GB941728_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941728_4lanes/GB941728_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941729_4lanes/GB941729_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941729_4lanes/GB941729_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941730_4lanes/GB941730_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941730_4lanes/GB941730_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941731_4lanes/GB941731_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941731_4lanes/GB941731_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941732_4lanes/GB941732_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941732_4lanes/GB941732_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941733_4lanes/GB941733_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941733_4lanes/GB941733_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941734_4lanes/GB941734_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941734_4lanes/GB941734_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941735_4lanes/GB941735_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941735_4lanes/GB941735_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941736_4lanes/GB941736_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941736_4lanes/GB941736_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941737_4lanes/GB941737_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941737_4lanes/GB941737_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941738_4lanes/GB941738_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941738_4lanes/GB941738_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941739_4lanes/GB941739_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941739_4lanes/GB941739_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941740_4lanes/GB941740_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941740_4lanes/GB941740_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941741_4lanes/GB941741_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941741_4lanes/GB941741_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941742_4lanes/GB941742_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941742_4lanes/GB941742_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941743_4lanes/GB941743_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941743_4lanes/GB941743_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941744_4lanes/GB941744_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941744_4lanes/GB941744_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941745_4lanes/GB941745_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941745_4lanes/GB941745_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941746_4lanes/GB941746_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941746_4lanes/GB941746_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941747_4lanes/GB941747_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941747_4lanes/GB941747_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941748_4lanes/GB941748_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941748_4lanes/GB941748_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941749_4lanes/GB941749_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941749_4lanes/GB941749_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941750_4lanes/GB941750_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941750_4lanes/GB941750_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941751_4lanes/GB941751_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941751_4lanes/GB941751_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941752_4lanes/GB941752_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941752_4lanes/GB941752_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941753_4lanes/GB941753_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941753_4lanes/GB941753_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941754_4lanes/GB941754_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941754_4lanes/GB941754_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941755_4lanes/GB941755_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941755_4lanes/GB941755_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941756_4lanes/GB941756_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941756_4lanes/GB941756_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941757_4lanes/GB941757_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941757_4lanes/GB941757_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941758_4lanes/GB941758_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941758_4lanes/GB941758_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941759_4lanes/GB941759_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941759_4lanes/GB941759_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941760_4lanes/GB941760_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941760_4lanes/GB941760_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941761_4lanes/GB941761_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941761_4lanes/GB941761_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941762_4lanes/GB941762_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941762_4lanes/GB941762_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941763_4lanes/GB941763_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941763_4lanes/GB941763_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941764_4lanes/GB941764_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941764_4lanes/GB941764_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941765_4lanes/GB941765_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941765_4lanes/GB941765_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941766_4lanes/GB941766_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941766_4lanes/GB941766_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941767_4lanes/GB941767_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941767_4lanes/GB941767_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941768_4lanes/GB941768_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941768_4lanes/GB941768_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941769_4lanes/GB941769_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941769_4lanes/GB941769_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941770_4lanes/GB941770_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941770_4lanes/GB941770_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941771_4lanes/GB941771_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941771_4lanes/GB941771_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941772_4lanes/GB941772_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941772_4lanes/GB941772_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941773_4lanes/GB941773_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941773_4lanes/GB941773_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941774_4lanes/GB941774_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941774_4lanes/GB941774_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941775_4lanes/GB941775_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941775_4lanes/GB941775_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941776_4lanes/GB941776_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941776_4lanes/GB941776_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941777_4lanes/GB941777_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941777_4lanes/GB941777_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941778_4lanes/GB941778_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941778_4lanes/GB941778_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941779_4lanes/GB941779_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941779_4lanes/GB941779_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941780_4lanes/GB941780_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941780_4lanes/GB941780_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941781_4lanes/GB941781_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941781_4lanes/GB941781_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941782_4lanes/GB941782_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941782_4lanes/GB941782_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941783_4lanes/GB941783_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941783_4lanes/GB941783_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941784_4lanes/GB941784_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941784_4lanes/GB941784_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941785_4lanes/GB941785_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941785_4lanes/GB941785_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941786_4lanes/GB941786_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941786_4lanes/GB941786_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941787_4lanes/GB941787_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941787_4lanes/GB941787_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941788_4lanes/GB941788_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941788_4lanes/GB941788_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941789_4lanes/GB941789_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941789_4lanes/GB941789_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941790_4lanes/GB941790_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941790_4lanes/GB941790_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941791_4lanes/GB941791_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941791_4lanes/GB941791_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941792_4lanes/GB941792_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941792_4lanes/GB941792_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941793_4lanes/GB941793_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941793_4lanes/GB941793_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941794_4lanes/GB941794_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941794_4lanes/GB941794_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941795_4lanes/GB941795_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941795_4lanes/GB941795_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941796_4lanes/GB941796_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941796_4lanes/GB941796_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941801_4lanes/GB941801_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941801_4lanes/GB941801_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941802_4lanes/GB941802_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941802_4lanes/GB941802_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941803_4lanes/GB941803_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941803_4lanes/GB941803_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941804_4lanes/GB941804_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941804_4lanes/GB941804_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941805_4lanes/GB941805_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941805_4lanes/GB941805_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941806_4lanes/GB941806_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941806_4lanes/GB941806_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941807_4lanes/GB941807_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941807_4lanes/GB941807_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941808_4lanes/GB941808_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941808_4lanes/GB941808_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941809_4lanes/GB941809_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941809_4lanes/GB941809_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941810_4lanes/GB941810_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941810_4lanes/GB941810_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941811_4lanes/GB941811_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941811_4lanes/GB941811_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941812_4lanes/GB941812_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941812_4lanes/GB941812_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941813_4lanes/GB941813_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941813_4lanes/GB941813_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941814_4lanes/GB941814_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941814_4lanes/GB941814_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941815_4lanes/GB941815_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941815_4lanes/GB941815_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941816_4lanes/GB941816_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941816_4lanes/GB941816_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941817_4lanes/GB941817_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941817_4lanes/GB941817_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941818_4lanes/GB941818_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941818_4lanes/GB941818_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941819_4lanes/GB941819_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941819_4lanes/GB941819_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941820_4lanes/GB941820_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941820_4lanes/GB941820_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941821_4lanes/GB941821_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941821_4lanes/GB941821_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941822_4lanes/GB941822_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941822_4lanes/GB941822_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941823_4lanes/GB941823_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941823_4lanes/GB941823_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941824_4lanes/GB941824_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941824_4lanes/GB941824_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941825_4lanes/GB941825_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941825_4lanes/GB941825_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941826_4lanes/GB941826_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941826_4lanes/GB941826_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941827_4lanes/GB941827_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941827_4lanes/GB941827_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941828_4lanes/GB941828_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941828_4lanes/GB941828_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941829_4lanes/GB941829_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941829_4lanes/GB941829_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941830_4lanes/GB941830_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941830_4lanes/GB941830_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941831_4lanes/GB941831_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941831_4lanes/GB941831_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941832_4lanes/GB941832_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941832_4lanes/GB941832_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941833_4lanes/GB941833_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941833_4lanes/GB941833_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941834_4lanes/GB941834_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941834_4lanes/GB941834_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941835_4lanes/GB941835_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941835_4lanes/GB941835_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941836_4lanes/GB941836_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941836_4lanes/GB941836_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941837_4lanes/GB941837_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941837_4lanes/GB941837_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941838_4lanes/GB941838_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941838_4lanes/GB941838_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941839_4lanes/GB941839_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941839_4lanes/GB941839_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941840_4lanes/GB941840_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941840_4lanes/GB941840_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941841_4lanes/GB941841_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941841_4lanes/GB941841_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941842_4lanes/GB941842_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941842_4lanes/GB941842_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941843_4lanes/GB941843_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941843_4lanes/GB941843_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941844_4lanes/GB941844_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941844_4lanes/GB941844_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941845_4lanes/GB941845_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941845_4lanes/GB941845_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941846_4lanes/GB941846_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941846_4lanes/GB941846_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941847_4lanes/GB941847_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941847_4lanes/GB941847_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941848_4lanes/GB941848_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941848_4lanes/GB941848_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941849_4lanes/GB941849_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941849_4lanes/GB941849_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941850_4lanes/GB941850_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941850_4lanes/GB941850_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941851_4lanes/GB941851_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941851_4lanes/GB941851_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941852_4lanes/GB941852_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941852_4lanes/GB941852_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941853_4lanes/GB941853_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941853_4lanes/GB941853_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941854_4lanes/GB941854_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941854_4lanes/GB941854_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941855_4lanes/GB941855_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941855_4lanes/GB941855_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941856_4lanes/GB941856_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941856_4lanes/GB941856_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941857_4lanes/GB941857_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941857_4lanes/GB941857_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941858_4lanes/GB941858_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941858_4lanes/GB941858_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941859_4lanes/GB941859_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941859_4lanes/GB941859_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941860_4lanes/GB941860_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941860_4lanes/GB941860_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941861_4lanes/GB941861_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941861_4lanes/GB941861_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941862_4lanes/GB941862_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941862_4lanes/GB941862_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941863_4lanes/GB941863_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941863_4lanes/GB941863_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941864_4lanes/GB941864_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941864_4lanes/GB941864_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941865_4lanes/GB941865_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941865_4lanes/GB941865_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941866_4lanes/GB941866_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941866_4lanes/GB941866_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941867_4lanes/GB941867_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941867_4lanes/GB941867_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941868_4lanes/GB941868_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941868_4lanes/GB941868_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941869_4lanes/GB941869_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941869_4lanes/GB941869_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941870_4lanes/GB941870_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941870_4lanes/GB941870_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941871_4lanes/GB941871_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941871_4lanes/GB941871_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941872_4lanes/GB941872_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941872_4lanes/GB941872_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941873_4lanes/GB941873_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941873_4lanes/GB941873_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941874_4lanes/GB941874_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941874_4lanes/GB941874_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941875_4lanes/GB941875_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941875_4lanes/GB941875_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941876_4lanes/GB941876_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941876_4lanes/GB941876_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941877_4lanes/GB941877_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941877_4lanes/GB941877_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941878_4lanes/GB941878_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941878_4lanes/GB941878_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941879_4lanes/GB941879_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941879_4lanes/GB941879_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941880_4lanes/GB941880_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941880_4lanes/GB941880_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941881_4lanes/GB941881_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941881_4lanes/GB941881_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941882_4lanes/GB941882_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941882_4lanes/GB941882_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941883_4lanes/GB941883_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941883_4lanes/GB941883_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941884_4lanes/GB941884_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941884_4lanes/GB941884_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941885_4lanes/GB941885_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941885_4lanes/GB941885_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941886_4lanes/GB941886_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941886_4lanes/GB941886_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941887_4lanes/GB941887_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941887_4lanes/GB941887_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941888_4lanes/GB941888_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941888_4lanes/GB941888_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941889_4lanes/GB941889_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941889_4lanes/GB941889_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941890_4lanes/GB941890_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941890_4lanes/GB941890_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941891_4lanes/GB941891_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941891_4lanes/GB941891_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941892_4lanes/GB941892_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941892_4lanes/GB941892_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941893_4lanes/GB941893_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941893_4lanes/GB941893_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941894_4lanes/GB941894_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941894_4lanes/GB941894_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941895_4lanes/GB941895_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941895_4lanes/GB941895_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941896_4lanes/GB941896_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941896_4lanes/GB941896_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941901_4lanes/GB941901_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941901_4lanes/GB941901_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941902_4lanes/GB941902_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941902_4lanes/GB941902_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941903_4lanes/GB941903_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941903_4lanes/GB941903_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941904_4lanes/GB941904_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941904_4lanes/GB941904_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941905_4lanes/GB941905_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941905_4lanes/GB941905_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941906_4lanes/GB941906_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941906_4lanes/GB941906_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941907_4lanes/GB941907_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941907_4lanes/GB941907_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941908_4lanes/GB941908_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941908_4lanes/GB941908_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941909_4lanes/GB941909_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941909_4lanes/GB941909_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941910_4lanes/GB941910_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941910_4lanes/GB941910_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941911_4lanes/GB941911_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941911_4lanes/GB941911_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941912_4lanes/GB941912_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941912_4lanes/GB941912_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941913_4lanes/GB941913_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941913_4lanes/GB941913_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941914_4lanes/GB941914_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941914_4lanes/GB941914_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941915_4lanes/GB941915_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941915_4lanes/GB941915_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941916_4lanes/GB941916_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941916_4lanes/GB941916_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941917_4lanes/GB941917_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941917_4lanes/GB941917_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941918_4lanes/GB941918_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941918_4lanes/GB941918_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941919_4lanes/GB941919_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941919_4lanes/GB941919_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941920_4lanes/GB941920_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941920_4lanes/GB941920_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941921_4lanes/GB941921_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941921_4lanes/GB941921_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941922_4lanes/GB941922_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941922_4lanes/GB941922_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941923_4lanes/GB941923_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941923_4lanes/GB941923_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941924_4lanes/GB941924_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941924_4lanes/GB941924_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941925_4lanes/GB941925_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941925_4lanes/GB941925_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941926_4lanes/GB941926_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941926_4lanes/GB941926_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941927_4lanes/GB941927_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941927_4lanes/GB941927_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941928_4lanes/GB941928_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941928_4lanes/GB941928_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941929_4lanes/GB941929_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941929_4lanes/GB941929_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941930_4lanes/GB941930_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941930_4lanes/GB941930_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941931_4lanes/GB941931_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941931_4lanes/GB941931_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941932_4lanes/GB941932_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941932_4lanes/GB941932_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941933_4lanes/GB941933_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941933_4lanes/GB941933_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941934_4lanes/GB941934_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941934_4lanes/GB941934_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941935_4lanes/GB941935_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941935_4lanes/GB941935_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941936_4lanes/GB941936_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941936_4lanes/GB941936_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941937_4lanes/GB941937_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941937_4lanes/GB941937_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941938_4lanes/GB941938_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941938_4lanes/GB941938_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941939_4lanes/GB941939_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941939_4lanes/GB941939_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941940_4lanes/GB941940_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941940_4lanes/GB941940_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941941_4lanes/GB941941_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941941_4lanes/GB941941_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941942_4lanes/GB941942_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941942_4lanes/GB941942_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941943_4lanes/GB941943_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941943_4lanes/GB941943_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941944_4lanes/GB941944_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941944_4lanes/GB941944_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941945_4lanes/GB941945_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941945_4lanes/GB941945_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941946_4lanes/GB941946_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941946_4lanes/GB941946_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941947_4lanes/GB941947_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941947_4lanes/GB941947_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941948_4lanes/GB941948_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941948_4lanes/GB941948_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941949_4lanes/GB941949_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941949_4lanes/GB941949_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941950_4lanes/GB941950_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941950_4lanes/GB941950_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941951_4lanes/GB941951_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941951_4lanes/GB941951_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941952_4lanes/GB941952_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941952_4lanes/GB941952_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941953_4lanes/GB941953_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941953_4lanes/GB941953_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941954_4lanes/GB941954_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941954_4lanes/GB941954_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941955_4lanes/GB941955_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941955_4lanes/GB941955_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941956_4lanes/GB941956_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941956_4lanes/GB941956_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941957_4lanes/GB941957_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941957_4lanes/GB941957_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941958_4lanes/GB941958_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941958_4lanes/GB941958_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941959_4lanes/GB941959_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941959_4lanes/GB941959_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941960_4lanes/GB941960_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941960_4lanes/GB941960_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941961_4lanes/GB941961_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941961_4lanes/GB941961_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941962_4lanes/GB941962_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941962_4lanes/GB941962_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941963_4lanes/GB941963_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941963_4lanes/GB941963_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941964_4lanes/GB941964_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941964_4lanes/GB941964_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941965_4lanes/GB941965_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941965_4lanes/GB941965_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941966_4lanes/GB941966_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941966_4lanes/GB941966_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941967_4lanes/GB941967_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941967_4lanes/GB941967_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941968_4lanes/GB941968_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941968_4lanes/GB941968_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941969_4lanes/GB941969_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941969_4lanes/GB941969_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941970_4lanes/GB941970_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941970_4lanes/GB941970_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941971_4lanes/GB941971_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941971_4lanes/GB941971_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941972_4lanes/GB941972_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941972_4lanes/GB941972_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941973_4lanes/GB941973_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941973_4lanes/GB941973_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941974_4lanes/GB941974_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941974_4lanes/GB941974_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941975_4lanes/GB941975_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941975_4lanes/GB941975_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941976_4lanes/GB941976_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941976_4lanes/GB941976_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941977_4lanes/GB941977_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941977_4lanes/GB941977_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941978_4lanes/GB941978_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941978_4lanes/GB941978_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941979_4lanes/GB941979_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941979_4lanes/GB941979_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941980_4lanes/GB941980_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941980_4lanes/GB941980_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941981_4lanes/GB941981_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941981_4lanes/GB941981_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941982_4lanes/GB941982_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941982_4lanes/GB941982_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941983_4lanes/GB941983_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941983_4lanes/GB941983_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941984_4lanes/GB941984_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941984_4lanes/GB941984_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941985_4lanes/GB941985_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941985_4lanes/GB941985_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941986_4lanes/GB941986_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941986_4lanes/GB941986_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941987_4lanes/GB941987_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941987_4lanes/GB941987_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941988_4lanes/GB941988_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941988_4lanes/GB941988_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941989_4lanes/GB941989_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941989_4lanes/GB941989_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941990_4lanes/GB941990_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941990_4lanes/GB941990_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941991_4lanes/GB941991_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941991_4lanes/GB941991_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941992_4lanes/GB941992_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941992_4lanes/GB941992_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941993_4lanes/GB941993_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941993_4lanes/GB941993_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941994_4lanes/GB941994_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941994_4lanes/GB941994_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941995_4lanes/GB941995_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941995_4lanes/GB941995_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K27me3_data/GB941996_4lanes/GB941996_4lanes_R1.fastq|samtools view -bS - >./H3K27me3_data/GB941996_4lanes/GB941996_4lanes_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930101_S1/GB930101_S1_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930101_S1/GB930101_S1_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930102_S2/GB930102_S2_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930102_S2/GB930102_S2_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930103_S3/GB930103_S3_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930103_S3/GB930103_S3_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930104_S4/GB930104_S4_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930104_S4/GB930104_S4_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930105_S5/GB930105_S5_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930105_S5/GB930105_S5_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930106_S6/GB930106_S6_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930106_S6/GB930106_S6_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930107_S7/GB930107_S7_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930107_S7/GB930107_S7_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930108_S8/GB930108_S8_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930108_S8/GB930108_S8_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930109_S9/GB930109_S9_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930109_S9/GB930109_S9_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930110_S10/GB930110_S10_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930110_S10/GB930110_S10_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930111_S11/GB930111_S11_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930111_S11/GB930111_S11_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930112_S12/GB930112_S12_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930112_S12/GB930112_S12_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930113_S13/GB930113_S13_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930113_S13/GB930113_S13_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930114_S14/GB930114_S14_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930114_S14/GB930114_S14_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930115_S15/GB930115_S15_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930115_S15/GB930115_S15_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930116_S16/GB930116_S16_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930116_S16/GB930116_S16_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930117_S17/GB930117_S17_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930117_S17/GB930117_S17_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930118_S18/GB930118_S18_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930118_S18/GB930118_S18_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930119_S19/GB930119_S19_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930119_S19/GB930119_S19_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930120_S20/GB930120_S20_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930120_S20/GB930120_S20_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930121_S21/GB930121_S21_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930121_S21/GB930121_S21_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930122_S22/GB930122_S22_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930122_S22/GB930122_S22_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930123_S23/GB930123_S23_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930123_S23/GB930123_S23_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930124_S24/GB930124_S24_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930124_S24/GB930124_S24_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930125_S25/GB930125_S25_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930125_S25/GB930125_S25_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930126_S26/GB930126_S26_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930126_S26/GB930126_S26_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930127_S27/GB930127_S27_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930127_S27/GB930127_S27_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930128_S28/GB930128_S28_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930128_S28/GB930128_S28_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930129_S29/GB930129_S29_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930129_S29/GB930129_S29_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930130_S30/GB930130_S30_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930130_S30/GB930130_S30_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930131_S31/GB930131_S31_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930131_S31/GB930131_S31_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930132_S32/GB930132_S32_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930132_S32/GB930132_S32_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930133_S33/GB930133_S33_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930133_S33/GB930133_S33_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930134_S34/GB930134_S34_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930134_S34/GB930134_S34_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930135_S35/GB930135_S35_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930135_S35/GB930135_S35_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930136_S36/GB930136_S36_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930136_S36/GB930136_S36_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930137_S37/GB930137_S37_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930137_S37/GB930137_S37_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930138_S38/GB930138_S38_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930138_S38/GB930138_S38_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930139_S39/GB930139_S39_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930139_S39/GB930139_S39_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930140_S40/GB930140_S40_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930140_S40/GB930140_S40_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930141_S41/GB930141_S41_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930141_S41/GB930141_S41_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930142_S42/GB930142_S42_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930142_S42/GB930142_S42_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930143_S43/GB930143_S43_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930143_S43/GB930143_S43_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930144_S44/GB930144_S44_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930144_S44/GB930144_S44_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930145_S45/GB930145_S45_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930145_S45/GB930145_S45_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930146_S46/GB930146_S46_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930146_S46/GB930146_S46_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930147_S47/GB930147_S47_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930147_S47/GB930147_S47_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930148_S48/GB930148_S48_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930148_S48/GB930148_S48_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930149_S49/GB930149_S49_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930149_S49/GB930149_S49_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930150_S50/GB930150_S50_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930150_S50/GB930150_S50_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930151_S51/GB930151_S51_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930151_S51/GB930151_S51_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930152_S52/GB930152_S52_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930152_S52/GB930152_S52_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930153_S53/GB930153_S53_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930153_S53/GB930153_S53_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930154_S54/GB930154_S54_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930154_S54/GB930154_S54_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930155_S55/GB930155_S55_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930155_S55/GB930155_S55_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930156_S56/GB930156_S56_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930156_S56/GB930156_S56_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930157_S57/GB930157_S57_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930157_S57/GB930157_S57_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930158_S58/GB930158_S58_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930158_S58/GB930158_S58_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930159_S59/GB930159_S59_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930159_S59/GB930159_S59_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930160_S60/GB930160_S60_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930160_S60/GB930160_S60_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930161_S61/GB930161_S61_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930161_S61/GB930161_S61_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930162_S62/GB930162_S62_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930162_S62/GB930162_S62_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930163_S63/GB930163_S63_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930163_S63/GB930163_S63_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930164_S64/GB930164_S64_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930164_S64/GB930164_S64_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930165_S65/GB930165_S65_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930165_S65/GB930165_S65_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930166_S66/GB930166_S66_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930166_S66/GB930166_S66_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930167_S67/GB930167_S67_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930167_S67/GB930167_S67_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930168_S68/GB930168_S68_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930168_S68/GB930168_S68_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930169_S69/GB930169_S69_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930169_S69/GB930169_S69_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930170_S70/GB930170_S70_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930170_S70/GB930170_S70_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930171_S71/GB930171_S71_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930171_S71/GB930171_S71_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930172_S72/GB930172_S72_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930172_S72/GB930172_S72_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930173_S73/GB930173_S73_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930173_S73/GB930173_S73_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930174_S74/GB930174_S74_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930174_S74/GB930174_S74_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930175_S75/GB930175_S75_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930175_S75/GB930175_S75_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930176_S76/GB930176_S76_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930176_S76/GB930176_S76_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930177_S77/GB930177_S77_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930177_S77/GB930177_S77_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930178_S78/GB930178_S78_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930178_S78/GB930178_S78_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930179_S79/GB930179_S79_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930179_S79/GB930179_S79_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930180_S80/GB930180_S80_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930180_S80/GB930180_S80_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930181_S81/GB930181_S81_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930181_S81/GB930181_S81_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930182_S82/GB930182_S82_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930182_S82/GB930182_S82_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930183_S83/GB930183_S83_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930183_S83/GB930183_S83_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930184_S84/GB930184_S84_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930184_S84/GB930184_S84_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930185_S85/GB930185_S85_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930185_S85/GB930185_S85_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930186_S86/GB930186_S86_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930186_S86/GB930186_S86_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930187_S87/GB930187_S87_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930187_S87/GB930187_S87_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930188_S88/GB930188_S88_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930188_S88/GB930188_S88_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930189_S89/GB930189_S89_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930189_S89/GB930189_S89_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930190_S90/GB930190_S90_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930190_S90/GB930190_S90_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930191_S91/GB930191_S91_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930191_S91/GB930191_S91_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930192_S92/GB930192_S92_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930192_S92/GB930192_S92_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930193_S93/GB930193_S93_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930193_S93/GB930193_S93_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930194_S94/GB930194_S94_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930194_S94/GB930194_S94_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930195_S95/GB930195_S95_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930195_S95/GB930195_S95_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930196_S96/GB930196_S96_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930196_S96/GB930196_S96_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930201_S97/GB930201_S97_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930201_S97/GB930201_S97_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930202_S98/GB930202_S98_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930202_S98/GB930202_S98_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930203_S99/GB930203_S99_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930203_S99/GB930203_S99_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930204_S100/GB930204_S100_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930204_S100/GB930204_S100_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930205_S101/GB930205_S101_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930205_S101/GB930205_S101_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930206_S102/GB930206_S102_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930206_S102/GB930206_S102_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930207_S103/GB930207_S103_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930207_S103/GB930207_S103_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930208_S104/GB930208_S104_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930208_S104/GB930208_S104_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930209_S105/GB930209_S105_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930209_S105/GB930209_S105_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930210_S106/GB930210_S106_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930210_S106/GB930210_S106_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930211_S107/GB930211_S107_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930211_S107/GB930211_S107_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930212_S108/GB930212_S108_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930212_S108/GB930212_S108_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930213_S109/GB930213_S109_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930213_S109/GB930213_S109_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930214_S110/GB930214_S110_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930214_S110/GB930214_S110_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930215_S111/GB930215_S111_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930215_S111/GB930215_S111_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930216_S112/GB930216_S112_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930216_S112/GB930216_S112_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930217_S113/GB930217_S113_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930217_S113/GB930217_S113_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930218_S114/GB930218_S114_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930218_S114/GB930218_S114_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930219_S115/GB930219_S115_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930219_S115/GB930219_S115_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930220_S116/GB930220_S116_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930220_S116/GB930220_S116_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930221_S117/GB930221_S117_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930221_S117/GB930221_S117_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930222_S118/GB930222_S118_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930222_S118/GB930222_S118_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930223_S119/GB930223_S119_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930223_S119/GB930223_S119_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930224_S120/GB930224_S120_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930224_S120/GB930224_S120_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930225_S121/GB930225_S121_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930225_S121/GB930225_S121_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930226_S122/GB930226_S122_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930226_S122/GB930226_S122_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930227_S123/GB930227_S123_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930227_S123/GB930227_S123_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930228_S124/GB930228_S124_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930228_S124/GB930228_S124_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930229_S125/GB930229_S125_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930229_S125/GB930229_S125_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930230_S126/GB930230_S126_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930230_S126/GB930230_S126_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930231_S127/GB930231_S127_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930231_S127/GB930231_S127_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930232_S128/GB930232_S128_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930232_S128/GB930232_S128_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930233_S129/GB930233_S129_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930233_S129/GB930233_S129_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930234_S130/GB930234_S130_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930234_S130/GB930234_S130_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930235_S131/GB930235_S131_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930235_S131/GB930235_S131_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930236_S132/GB930236_S132_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930236_S132/GB930236_S132_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930237_S133/GB930237_S133_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930237_S133/GB930237_S133_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930238_S134/GB930238_S134_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930238_S134/GB930238_S134_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930239_S135/GB930239_S135_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930239_S135/GB930239_S135_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930240_S136/GB930240_S136_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930240_S136/GB930240_S136_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930241_S137/GB930241_S137_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930241_S137/GB930241_S137_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930242_S138/GB930242_S138_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930242_S138/GB930242_S138_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930243_S139/GB930243_S139_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930243_S139/GB930243_S139_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930244_S140/GB930244_S140_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930244_S140/GB930244_S140_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930245_S141/GB930245_S141_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930245_S141/GB930245_S141_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930246_S142/GB930246_S142_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930246_S142/GB930246_S142_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930247_S143/GB930247_S143_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930247_S143/GB930247_S143_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930248_S144/GB930248_S144_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930248_S144/GB930248_S144_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930249_S145/GB930249_S145_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930249_S145/GB930249_S145_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930250_S146/GB930250_S146_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930250_S146/GB930250_S146_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930251_S147/GB930251_S147_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930251_S147/GB930251_S147_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930252_S148/GB930252_S148_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930252_S148/GB930252_S148_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930253_S149/GB930253_S149_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930253_S149/GB930253_S149_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930254_S150/GB930254_S150_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930254_S150/GB930254_S150_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930255_S151/GB930255_S151_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930255_S151/GB930255_S151_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930256_S152/GB930256_S152_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930256_S152/GB930256_S152_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930257_S153/GB930257_S153_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930257_S153/GB930257_S153_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930258_S154/GB930258_S154_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930258_S154/GB930258_S154_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930259_S155/GB930259_S155_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930259_S155/GB930259_S155_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930260_S156/GB930260_S156_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930260_S156/GB930260_S156_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930261_S157/GB930261_S157_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930261_S157/GB930261_S157_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930262_S158/GB930262_S158_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930262_S158/GB930262_S158_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930263_S159/GB930263_S159_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930263_S159/GB930263_S159_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930264_S160/GB930264_S160_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930264_S160/GB930264_S160_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930265_S161/GB930265_S161_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930265_S161/GB930265_S161_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930266_S162/GB930266_S162_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930266_S162/GB930266_S162_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930267_S163/GB930267_S163_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930267_S163/GB930267_S163_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930268_S164/GB930268_S164_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930268_S164/GB930268_S164_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930269_S165/GB930269_S165_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930269_S165/GB930269_S165_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930270_S166/GB930270_S166_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930270_S166/GB930270_S166_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930271_S167/GB930271_S167_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930271_S167/GB930271_S167_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930272_S168/GB930272_S168_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930272_S168/GB930272_S168_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930273_S169/GB930273_S169_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930273_S169/GB930273_S169_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930274_S170/GB930274_S170_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930274_S170/GB930274_S170_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930275_S171/GB930275_S171_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930275_S171/GB930275_S171_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930276_S172/GB930276_S172_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930276_S172/GB930276_S172_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930277_S173/GB930277_S173_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930277_S173/GB930277_S173_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930278_S174/GB930278_S174_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930278_S174/GB930278_S174_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930279_S175/GB930279_S175_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930279_S175/GB930279_S175_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930280_S176/GB930280_S176_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930280_S176/GB930280_S176_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930281_S177/GB930281_S177_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930281_S177/GB930281_S177_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930282_S178/GB930282_S178_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930282_S178/GB930282_S178_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930283_S179/GB930283_S179_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930283_S179/GB930283_S179_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930284_S180/GB930284_S180_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930284_S180/GB930284_S180_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930285_S181/GB930285_S181_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930285_S181/GB930285_S181_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930286_S182/GB930286_S182_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930286_S182/GB930286_S182_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930287_S183/GB930287_S183_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930287_S183/GB930287_S183_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930288_S184/GB930288_S184_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930288_S184/GB930288_S184_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930289_S185/GB930289_S185_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930289_S185/GB930289_S185_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930290_S186/GB930290_S186_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930290_S186/GB930290_S186_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930291_S187/GB930291_S187_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930291_S187/GB930291_S187_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930292_S188/GB930292_S188_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930292_S188/GB930292_S188_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930293_S189/GB930293_S189_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930293_S189/GB930293_S189_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930294_S190/GB930294_S190_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930294_S190/GB930294_S190_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930295_S191/GB930295_S191_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930295_S191/GB930295_S191_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930296_S192/GB930296_S192_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930296_S192/GB930296_S192_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930301_S193/GB930301_S193_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930301_S193/GB930301_S193_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930302_S194/GB930302_S194_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930302_S194/GB930302_S194_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930303_S195/GB930303_S195_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930303_S195/GB930303_S195_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930304_S196/GB930304_S196_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930304_S196/GB930304_S196_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930305_S197/GB930305_S197_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930305_S197/GB930305_S197_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930306_S198/GB930306_S198_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930306_S198/GB930306_S198_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930307_S199/GB930307_S199_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930307_S199/GB930307_S199_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930308_S200/GB930308_S200_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930308_S200/GB930308_S200_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930309_S201/GB930309_S201_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930309_S201/GB930309_S201_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930310_S202/GB930310_S202_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930310_S202/GB930310_S202_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930311_S203/GB930311_S203_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930311_S203/GB930311_S203_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930312_S204/GB930312_S204_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930312_S204/GB930312_S204_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930313_S205/GB930313_S205_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930313_S205/GB930313_S205_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930314_S206/GB930314_S206_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930314_S206/GB930314_S206_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930315_S207/GB930315_S207_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930315_S207/GB930315_S207_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930316_S208/GB930316_S208_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930316_S208/GB930316_S208_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930317_S209/GB930317_S209_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930317_S209/GB930317_S209_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930318_S210/GB930318_S210_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930318_S210/GB930318_S210_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930319_S211/GB930319_S211_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930319_S211/GB930319_S211_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930320_S212/GB930320_S212_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930320_S212/GB930320_S212_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930321_S213/GB930321_S213_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930321_S213/GB930321_S213_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930322_S214/GB930322_S214_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930322_S214/GB930322_S214_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930323_S215/GB930323_S215_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930323_S215/GB930323_S215_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930324_S216/GB930324_S216_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930324_S216/GB930324_S216_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930325_S217/GB930325_S217_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930325_S217/GB930325_S217_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930326_S218/GB930326_S218_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930326_S218/GB930326_S218_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930327_S219/GB930327_S219_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930327_S219/GB930327_S219_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930328_S220/GB930328_S220_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930328_S220/GB930328_S220_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930329_S221/GB930329_S221_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930329_S221/GB930329_S221_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930330_S222/GB930330_S222_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930330_S222/GB930330_S222_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930331_S223/GB930331_S223_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930331_S223/GB930331_S223_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930332_S224/GB930332_S224_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930332_S224/GB930332_S224_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930333_S225/GB930333_S225_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930333_S225/GB930333_S225_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930334_S226/GB930334_S226_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930334_S226/GB930334_S226_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930335_S227/GB930335_S227_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930335_S227/GB930335_S227_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930336_S228/GB930336_S228_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930336_S228/GB930336_S228_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930337_S229/GB930337_S229_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930337_S229/GB930337_S229_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930338_S230/GB930338_S230_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930338_S230/GB930338_S230_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930339_S231/GB930339_S231_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930339_S231/GB930339_S231_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930340_S232/GB930340_S232_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930340_S232/GB930340_S232_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930341_S233/GB930341_S233_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930341_S233/GB930341_S233_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930342_S1/GB930342_S1_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930342_S1/GB930342_S1_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930343_S2/GB930343_S2_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930343_S2/GB930343_S2_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930344_S3/GB930344_S3_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930344_S3/GB930344_S3_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930345_S4/GB930345_S4_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930345_S4/GB930345_S4_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930346_S5/GB930346_S5_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930346_S5/GB930346_S5_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930347_S6/GB930347_S6_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930347_S6/GB930347_S6_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930348_S7/GB930348_S7_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930348_S7/GB930348_S7_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930349_S8/GB930349_S8_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930349_S8/GB930349_S8_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930350_S9/GB930350_S9_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930350_S9/GB930350_S9_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930351_S10/GB930351_S10_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930351_S10/GB930351_S10_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930352_S11/GB930352_S11_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930352_S11/GB930352_S11_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930353_S12/GB930353_S12_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930353_S12/GB930353_S12_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930354_S13/GB930354_S13_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930354_S13/GB930354_S13_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930355_S14/GB930355_S14_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930355_S14/GB930355_S14_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930356_S15/GB930356_S15_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930356_S15/GB930356_S15_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930357_S16/GB930357_S16_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930357_S16/GB930357_S16_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930358_S17/GB930358_S17_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930358_S17/GB930358_S17_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930359_S18/GB930359_S18_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930359_S18/GB930359_S18_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930360_S19/GB930360_S19_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930360_S19/GB930360_S19_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930361_S20/GB930361_S20_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930361_S20/GB930361_S20_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930362_S21/GB930362_S21_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930362_S21/GB930362_S21_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930363_S22/GB930363_S22_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930363_S22/GB930363_S22_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930364_S23/GB930364_S23_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930364_S23/GB930364_S23_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930365_S24/GB930365_S24_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930365_S24/GB930365_S24_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930366_S25/GB930366_S25_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930366_S25/GB930366_S25_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930367_S26/GB930367_S26_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930367_S26/GB930367_S26_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930368_S27/GB930368_S27_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930368_S27/GB930368_S27_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930369_S28/GB930369_S28_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930369_S28/GB930369_S28_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930370_S29/GB930370_S29_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930370_S29/GB930370_S29_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930371_S30/GB930371_S30_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930371_S30/GB930371_S30_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930372_S31/GB930372_S31_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930372_S31/GB930372_S31_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930373_S32/GB930373_S32_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930373_S32/GB930373_S32_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930374_S33/GB930374_S33_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930374_S33/GB930374_S33_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930375_S34/GB930375_S34_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930375_S34/GB930375_S34_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930376_S35/GB930376_S35_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930376_S35/GB930376_S35_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930377_S36/GB930377_S36_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930377_S36/GB930377_S36_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930378_S37/GB930378_S37_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930378_S37/GB930378_S37_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930379_S38/GB930379_S38_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930379_S38/GB930379_S38_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930380_S39/GB930380_S39_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930380_S39/GB930380_S39_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930381_S40/GB930381_S40_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930381_S40/GB930381_S40_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930382_S41/GB930382_S41_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930382_S41/GB930382_S41_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930383_S42/GB930383_S42_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930383_S42/GB930383_S42_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930384_S43/GB930384_S43_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930384_S43/GB930384_S43_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930385_S44/GB930385_S44_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930385_S44/GB930385_S44_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930386_S45/GB930386_S45_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930386_S45/GB930386_S45_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930387_S46/GB930387_S46_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930387_S46/GB930387_S46_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930388_S47/GB930388_S47_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930388_S47/GB930388_S47_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930389_S48/GB930389_S48_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930389_S48/GB930389_S48_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930390_S49/GB930390_S49_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930390_S49/GB930390_S49_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930391_S50/GB930391_S50_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930391_S50/GB930391_S50_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930392_S51/GB930392_S51_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930392_S51/GB930392_S51_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930393_S52/GB930393_S52_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930393_S52/GB930393_S52_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930394_S53/GB930394_S53_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930394_S53/GB930394_S53_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930395_S54/GB930395_S54_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930395_S54/GB930395_S54_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930396_S55/GB930396_S55_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930396_S55/GB930396_S55_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930401_S56/GB930401_S56_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930401_S56/GB930401_S56_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930402_S57/GB930402_S57_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930402_S57/GB930402_S57_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930403_S58/GB930403_S58_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930403_S58/GB930403_S58_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930404_S59/GB930404_S59_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930404_S59/GB930404_S59_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930405_S60/GB930405_S60_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930405_S60/GB930405_S60_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930406_S61/GB930406_S61_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930406_S61/GB930406_S61_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930407_S62/GB930407_S62_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930407_S62/GB930407_S62_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930408_S63/GB930408_S63_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930408_S63/GB930408_S63_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930409_S64/GB930409_S64_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930409_S64/GB930409_S64_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930410_S65/GB930410_S65_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930410_S65/GB930410_S65_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930411_S66/GB930411_S66_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930411_S66/GB930411_S66_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930412_S67/GB930412_S67_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930412_S67/GB930412_S67_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930413_S68/GB930413_S68_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930413_S68/GB930413_S68_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930414_S69/GB930414_S69_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930414_S69/GB930414_S69_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930415_S70/GB930415_S70_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930415_S70/GB930415_S70_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930416_S71/GB930416_S71_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930416_S71/GB930416_S71_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930417_S72/GB930417_S72_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930417_S72/GB930417_S72_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930418_S73/GB930418_S73_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930418_S73/GB930418_S73_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930419_S74/GB930419_S74_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930419_S74/GB930419_S74_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930420_S75/GB930420_S75_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930420_S75/GB930420_S75_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930421_S76/GB930421_S76_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930421_S76/GB930421_S76_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930422_S77/GB930422_S77_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930422_S77/GB930422_S77_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930423_S78/GB930423_S78_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930423_S78/GB930423_S78_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930424_S79/GB930424_S79_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930424_S79/GB930424_S79_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930425_S80/GB930425_S80_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930425_S80/GB930425_S80_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930426_S81/GB930426_S81_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930426_S81/GB930426_S81_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930427_S82/GB930427_S82_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930427_S82/GB930427_S82_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930428_S83/GB930428_S83_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930428_S83/GB930428_S83_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930429_S84/GB930429_S84_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930429_S84/GB930429_S84_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930430_S85/GB930430_S85_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930430_S85/GB930430_S85_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930431_S86/GB930431_S86_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930431_S86/GB930431_S86_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930432_S87/GB930432_S87_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930432_S87/GB930432_S87_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930433_S88/GB930433_S88_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930433_S88/GB930433_S88_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930434_S89/GB930434_S89_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930434_S89/GB930434_S89_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930435_S90/GB930435_S90_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930435_S90/GB930435_S90_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930436_S91/GB930436_S91_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930436_S91/GB930436_S91_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930437_S92/GB930437_S92_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930437_S92/GB930437_S92_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930438_S93/GB930438_S93_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930438_S93/GB930438_S93_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930439_S94/GB930439_S94_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930439_S94/GB930439_S94_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930440_S95/GB930440_S95_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930440_S95/GB930440_S95_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930441_S96/GB930441_S96_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930441_S96/GB930441_S96_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930442_S97/GB930442_S97_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930442_S97/GB930442_S97_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930443_S98/GB930443_S98_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930443_S98/GB930443_S98_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930444_S99/GB930444_S99_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930444_S99/GB930444_S99_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930445_S100/GB930445_S100_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930445_S100/GB930445_S100_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930446_S101/GB930446_S101_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930446_S101/GB930446_S101_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930447_S102/GB930447_S102_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930447_S102/GB930447_S102_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930448_S103/GB930448_S103_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930448_S103/GB930448_S103_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930449_S104/GB930449_S104_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930449_S104/GB930449_S104_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930450_S105/GB930450_S105_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930450_S105/GB930450_S105_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930451_S106/GB930451_S106_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930451_S106/GB930451_S106_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930452_S107/GB930452_S107_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930452_S107/GB930452_S107_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930453_S108/GB930453_S108_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930453_S108/GB930453_S108_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930454_S109/GB930454_S109_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930454_S109/GB930454_S109_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930455_S110/GB930455_S110_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930455_S110/GB930455_S110_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930456_S111/GB930456_S111_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930456_S111/GB930456_S111_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930457_S112/GB930457_S112_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930457_S112/GB930457_S112_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930458_S113/GB930458_S113_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930458_S113/GB930458_S113_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930459_S114/GB930459_S114_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930459_S114/GB930459_S114_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930460_S115/GB930460_S115_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930460_S115/GB930460_S115_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930461_S116/GB930461_S116_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930461_S116/GB930461_S116_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930462_S117/GB930462_S117_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930462_S117/GB930462_S117_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930463_S118/GB930463_S118_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930463_S118/GB930463_S118_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930464_S119/GB930464_S119_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930464_S119/GB930464_S119_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930465_S120/GB930465_S120_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930465_S120/GB930465_S120_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930466_S121/GB930466_S121_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930466_S121/GB930466_S121_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930467_S122/GB930467_S122_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930467_S122/GB930467_S122_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930468_S123/GB930468_S123_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930468_S123/GB930468_S123_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930469_S124/GB930469_S124_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930469_S124/GB930469_S124_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930470_S125/GB930470_S125_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930470_S125/GB930470_S125_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930471_S126/GB930471_S126_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930471_S126/GB930471_S126_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930472_S127/GB930472_S127_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930472_S127/GB930472_S127_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930473_S128/GB930473_S128_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930473_S128/GB930473_S128_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930474_S129/GB930474_S129_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930474_S129/GB930474_S129_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930475_S130/GB930475_S130_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930475_S130/GB930475_S130_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930476_S131/GB930476_S131_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930476_S131/GB930476_S131_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930477_S132/GB930477_S132_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930477_S132/GB930477_S132_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930478_S133/GB930478_S133_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930478_S133/GB930478_S133_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930479_S134/GB930479_S134_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930479_S134/GB930479_S134_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930480_S135/GB930480_S135_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930480_S135/GB930480_S135_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930481_S136/GB930481_S136_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930481_S136/GB930481_S136_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930482_S137/GB930482_S137_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930482_S137/GB930482_S137_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930483_S138/GB930483_S138_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930483_S138/GB930483_S138_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930484_S139/GB930484_S139_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930484_S139/GB930484_S139_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930485_S140/GB930485_S140_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930485_S140/GB930485_S140_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930486_S141/GB930486_S141_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930486_S141/GB930486_S141_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930487_S142/GB930487_S142_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930487_S142/GB930487_S142_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930488_S143/GB930488_S143_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930488_S143/GB930488_S143_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930489_S144/GB930489_S144_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930489_S144/GB930489_S144_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930490_S145/GB930490_S145_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930490_S145/GB930490_S145_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930491_S146/GB930491_S146_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930491_S146/GB930491_S146_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930492_S147/GB930492_S147_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930492_S147/GB930492_S147_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930493_S148/GB930493_S148_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930493_S148/GB930493_S148_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930494_S149/GB930494_S149_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930494_S149/GB930494_S149_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930495_S150/GB930495_S150_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930495_S150/GB930495_S150_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930496_S151/GB930496_S151_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930496_S151/GB930496_S151_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930501_S152/GB930501_S152_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930501_S152/GB930501_S152_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930502_S153/GB930502_S153_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930502_S153/GB930502_S153_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930503_S154/GB930503_S154_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930503_S154/GB930503_S154_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930504_S155/GB930504_S155_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930504_S155/GB930504_S155_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930505_S156/GB930505_S156_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930505_S156/GB930505_S156_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930506_S157/GB930506_S157_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930506_S157/GB930506_S157_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930507_S158/GB930507_S158_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930507_S158/GB930507_S158_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930508_S159/GB930508_S159_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930508_S159/GB930508_S159_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930509_S160/GB930509_S160_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930509_S160/GB930509_S160_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930510_S161/GB930510_S161_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930510_S161/GB930510_S161_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930511_S162/GB930511_S162_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930511_S162/GB930511_S162_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930512_S163/GB930512_S163_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930512_S163/GB930512_S163_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930513_S164/GB930513_S164_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930513_S164/GB930513_S164_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930514_S165/GB930514_S165_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930514_S165/GB930514_S165_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930515_S166/GB930515_S166_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930515_S166/GB930515_S166_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930516_S167/GB930516_S167_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930516_S167/GB930516_S167_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930517_S168/GB930517_S168_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930517_S168/GB930517_S168_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930518_S169/GB930518_S169_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930518_S169/GB930518_S169_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930519_S170/GB930519_S170_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930519_S170/GB930519_S170_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930520_S171/GB930520_S171_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930520_S171/GB930520_S171_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930521_S172/GB930521_S172_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930521_S172/GB930521_S172_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930522_S173/GB930522_S173_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930522_S173/GB930522_S173_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930523_S174/GB930523_S174_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930523_S174/GB930523_S174_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930524_S175/GB930524_S175_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930524_S175/GB930524_S175_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930525_S176/GB930525_S176_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930525_S176/GB930525_S176_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930526_S177/GB930526_S177_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930526_S177/GB930526_S177_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930527_S178/GB930527_S178_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930527_S178/GB930527_S178_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930528_S179/GB930528_S179_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930528_S179/GB930528_S179_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930529_S180/GB930529_S180_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930529_S180/GB930529_S180_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930530_S181/GB930530_S181_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930530_S181/GB930530_S181_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930531_S182/GB930531_S182_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930531_S182/GB930531_S182_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930532_S183/GB930532_S183_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930532_S183/GB930532_S183_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930533_S184/GB930533_S184_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930533_S184/GB930533_S184_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930534_S185/GB930534_S185_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930534_S185/GB930534_S185_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930535_S186/GB930535_S186_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930535_S186/GB930535_S186_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930536_S187/GB930536_S187_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930536_S187/GB930536_S187_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930537_S188/GB930537_S188_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930537_S188/GB930537_S188_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930538_S189/GB930538_S189_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930538_S189/GB930538_S189_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930539_S190/GB930539_S190_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930539_S190/GB930539_S190_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930540_S191/GB930540_S191_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930540_S191/GB930540_S191_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930541_S192/GB930541_S192_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930541_S192/GB930541_S192_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930542_S193/GB930542_S193_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930542_S193/GB930542_S193_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930543_S194/GB930543_S194_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930543_S194/GB930543_S194_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930544_S195/GB930544_S195_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930544_S195/GB930544_S195_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930545_S196/GB930545_S196_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930545_S196/GB930545_S196_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930546_S197/GB930546_S197_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930546_S197/GB930546_S197_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930547_S198/GB930547_S198_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930547_S198/GB930547_S198_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930548_S199/GB930548_S199_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930548_S199/GB930548_S199_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930549_S200/GB930549_S200_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930549_S200/GB930549_S200_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930550_S201/GB930550_S201_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930550_S201/GB930550_S201_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930551_S202/GB930551_S202_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930551_S202/GB930551_S202_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930552_S203/GB930552_S203_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930552_S203/GB930552_S203_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930553_S204/GB930553_S204_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930553_S204/GB930553_S204_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930554_S205/GB930554_S205_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930554_S205/GB930554_S205_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930555_S206/GB930555_S206_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930555_S206/GB930555_S206_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930556_S207/GB930556_S207_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930556_S207/GB930556_S207_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930557_S208/GB930557_S208_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930557_S208/GB930557_S208_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930558_S209/GB930558_S209_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930558_S209/GB930558_S209_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930559_S210/GB930559_S210_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930559_S210/GB930559_S210_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930560_S211/GB930560_S211_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930560_S211/GB930560_S211_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930561_S212/GB930561_S212_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930561_S212/GB930561_S212_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930562_S213/GB930562_S213_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930562_S213/GB930562_S213_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930563_S214/GB930563_S214_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930563_S214/GB930563_S214_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930564_S215/GB930564_S215_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930564_S215/GB930564_S215_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930565_S216/GB930565_S216_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930565_S216/GB930565_S216_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930566_S217/GB930566_S217_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930566_S217/GB930566_S217_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930567_S218/GB930567_S218_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930567_S218/GB930567_S218_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930568_S219/GB930568_S219_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930568_S219/GB930568_S219_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930569_S220/GB930569_S220_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930569_S220/GB930569_S220_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930570_S221/GB930570_S221_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930570_S221/GB930570_S221_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930571_S222/GB930571_S222_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930571_S222/GB930571_S222_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930572_S223/GB930572_S223_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930572_S223/GB930572_S223_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930573_S224/GB930573_S224_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930573_S224/GB930573_S224_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930574_S225/GB930574_S225_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930574_S225/GB930574_S225_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930575_S226/GB930575_S226_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930575_S226/GB930575_S226_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930576_S227/GB930576_S227_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930576_S227/GB930576_S227_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930577_S228/GB930577_S228_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930577_S228/GB930577_S228_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930578_S229/GB930578_S229_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930578_S229/GB930578_S229_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930579_S230/GB930579_S230_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930579_S230/GB930579_S230_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930580_S231/GB930580_S231_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930580_S231/GB930580_S231_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930581_S232/GB930581_S232_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930581_S232/GB930581_S232_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930582_S233/GB930582_S233_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930582_S233/GB930582_S233_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930583_S234/GB930583_S234_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930583_S234/GB930583_S234_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930584_S235/GB930584_S235_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930584_S235/GB930584_S235_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930585_S236/GB930585_S236_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930585_S236/GB930585_S236_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930586_S237/GB930586_S237_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930586_S237/GB930586_S237_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930587_S238/GB930587_S238_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930587_S238/GB930587_S238_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930588_S239/GB930588_S239_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930588_S239/GB930588_S239_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930589_S240/GB930589_S240_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930589_S240/GB930589_S240_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930590_S241/GB930590_S241_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930590_S241/GB930590_S241_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930591_S242/GB930591_S242_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930591_S242/GB930591_S242_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930592_S243/GB930592_S243_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930592_S243/GB930592_S243_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930593_S244/GB930593_S244_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930593_S244/GB930593_S244_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930594_S245/GB930594_S245_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930594_S245/GB930594_S245_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930595_S246/GB930595_S246_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930595_S246/GB930595_S246_hg18.bam
bowtie2  -p 18 -q -5 0 -3 0 -x /data/kuw/biocore/Basic_data/Bowtie2Index/hg18/genome -U ./H3K4me3_data/GB930596_S247/GB930596_S247_R1.fastq|samtools view -bS - >./H3K4me3_data/GB930596_S247/GB930596_S247_hg18.bam
