#chrom	start	stop	mid	gene_id	strand	gene_type	gene_status	gene_name	isoform_count	exon_count	HFF_SON_TSA_2.0
chr1	11869	14409	13139	ENSG00000223972.5	+	transcribed_unprocessed_pseudogene	KNOWN	DDX11L1	2	6	0.818668
chr1	14404	29570	21987	ENSG00000227232.5	-	unprocessed_pseudogene	KNOWN	WASH7P	1	11	0.818668
chr1	17369	17436	17402	ENSG00000278267.1	-	miRNA	KNOWN	MIR6859-1	1	1	0.818668
chr1	29554	31109	30331	ENSG00000243485.3	+	lincRNA	KNOWN	RP11-34P13.3	2	3	0.633049
chr1	30366	30503	30434	ENSG00000274890.1	+	miRNA	KNOWN	MIR1302-2	1	1	0.558634
chr1	34554	36081	35317	ENSG00000237613.2	-	lincRNA	KNOWN	FAM138A	2	3	0.558634
chr1	52473	53312	52892	ENSG00000268020.3	+	unprocessed_pseudogene	KNOWN	OR4G4P	1	1	0.036850
chr1	62948	63887	63417	ENSG00000240361.1	+	unprocessed_pseudogene	KNOWN	OR4G11P	1	1	0.036850
chr1	69091	70008	69549	ENSG00000186092.4	+	protein_coding	KNOWN	OR4F5	1	1	0.034775
chr1	89295	133723	111509	ENSG00000238009.6	-	lincRNA	KNOWN	RP11-34P13.7	5	4	0.061722
chr1	89551	91105	90328	ENSG00000239945.1	-	lincRNA	KNOWN	RP11-34P13.8	1	2	0.081856
chr1	131025	134836	132930	ENSG00000233750.3	+	processed_pseudogene	KNOWN	CICP27	1	1	0.214558
chr1	135141	135895	135518	ENSG00000268903.1	-	processed_pseudogene	KNOWN	RP11-34P13.15	1	1	0.214558
chr1	137682	137965	137823	ENSG00000269981.1	-	processed_pseudogene	KNOWN	RP11-34P13.16	1	1	0.214558
chr1	139790	140339	140064	ENSG00000239906.1	-	antisense	KNOWN	RP11-34P13.14	1	2	0.214558
chr1	141474	173862	157668	ENSG00000241860.6	-	processed_transcript	KNOWN	RP11-34P13.13	4	8	0.214955
chr1	157784	157887	157835	ENSG00000222623.1	-	snRNA	KNOWN	RNU6-1100P	1	1	0.161894
chr1	160446	161525	160985	ENSG00000241599.1	+	lincRNA	KNOWN	RP11-34P13.9	1	2	0.161894
chr1	182393	184158	183275	ENSG00000279928.1	+	protein_coding	KNOWN	FO538757.3	1	3	0.490541
chr1	184923	200322	192622	ENSG00000279457.3	-	protein_coding	KNOWN	FO538757.2	3	15	0.664343
chr1	187891	187958	187924	ENSG00000273874.1	-	miRNA	KNOWN	MIR6859-2	1	1	0.490541
chr1	200880	201017	200948	ENSG00000275135.1	+	miRNA	NOVEL	FO538757.1	1	1	0.749805
chr1	257864	297502	277683	ENSG00000228463.9	-	lincRNA	KNOWN	AP006222.2	5	4	-0.272373
chr1	258568	259024	258796	ENSG00000241670.3	-	processed_pseudogene	KNOWN	RPL23AP21	1	1	-0.727436
chr1	347982	348366	348174	ENSG00000236679.2	-	processed_pseudogene	KNOWN	RPL23AP24	1	1	0.000000
chr1	357383	359681	358532	ENSG00000236743.1	-	lincRNA	KNOWN	RP5-857K21.15	1	3	0.026616
chr1	358857	366052	362454	ENSG00000236601.2	+	lincRNA	KNOWN	RP4-669L17.2	3	2	0.026616
chr1	365389	501617	433503	ENSG00000237094.11	-	lincRNA	KNOWN	RP4-669L17.10	17	4	-0.003077
chr1	439870	440232	440051	ENSG00000269732.1	+	processed_pseudogene	KNOWN	WBP1LP7	1	1	-0.037939
chr1	450740	451678	451209	ENSG00000278566.1	-	protein_coding	KNOWN	OR4F29	1	1	-0.011844
chr1	485026	485208	485117	ENSG00000224813.3	-	transcribed_unprocessed_pseudogene	KNOWN	SEPT14P13	1	1	-0.451370
chr1	487101	489906	488503	ENSG00000233653.3	+	processed_pseudogene	KNOWN	CICP7	1	2	-0.451370
chr1	491225	493241	492233	ENSG00000250575.1	-	unprocessed_pseudogene	KNOWN	RP4-669L17.8	1	2	0.289029
chr1	516376	516479	516427	ENSG00000278757.1	-	snRNA	NOVEL	U6	1	1	0.176881
chr1	585989	827796	706892	ENSG00000230021.8	-	lincRNA	KNOWN	RP5-857K21.4	13	6	0.186320
chr1	587629	594768	591198	ENSG00000235146.2	+	lincRNA	KNOWN	RP5-857K21.2	2	2	0.081462
chr1	629062	629433	629247	ENSG00000225972.1	+	unprocessed_pseudogene	KNOWN	MTND1P23	1	1	0.338829
chr1	629640	630683	630161	ENSG00000225630.1	+	unprocessed_pseudogene	KNOWN	MTND2P28	1	1	0.134265
chr1	630896	630958	630927	ENSG00000276171.1	+	miRNA	NOVEL	AC114498.1	1	1	0.026899
chr1	631074	632616	631845	ENSG00000237973.1	+	unprocessed_pseudogene	KNOWN	MTCO1P12	1	1	0.026899
chr1	632325	632413	632369	ENSG00000278791.1	-	miRNA	KNOWN	MIR6723	1	1	0.026899
chr1	632757	633438	633097	ENSG00000229344.1	+	unprocessed_pseudogene	KNOWN	MTCO2P12	1	1	0.026899
chr1	633535	633741	633638	ENSG00000240409.1	+	unprocessed_pseudogene	KNOWN	MTATP8P1	1	1	0.026899
chr1	633696	634376	634036	ENSG00000248527.1	+	unprocessed_pseudogene	KNOWN	MTATP6P1	1	1	0.026899
chr1	634376	634922	634649	ENSG00000198744.5	+	unprocessed_pseudogene	KNOWN	MTCO3P12	1	1	0.026899
chr1	674842	675265	675053	ENSG00000268663.1	+	processed_pseudogene	KNOWN	WBP1LP6	1	1	-0.011720
chr1	685716	686654	686185	ENSG00000273547.1	-	protein_coding	KNOWN	OR4F16	1	1	-0.011720
chr1	722092	724903	723497	ENSG00000229376.3	+	processed_pseudogene	KNOWN	CICP3	1	2	-0.259174
chr1	725885	778626	752255	ENSG00000228327.3	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-206L10.2	2	16	0.348889
chr1	758233	758336	758284	ENSG00000223181.1	-	snRNA	KNOWN	RNU6-1199P	1	1	0.209643
chr1	760911	761989	761450	ENSG00000229905.1	+	antisense	KNOWN	RP11-206L10.4	1	2	0.209643
chr1	778770	810060	794415	ENSG00000237491.8	+	lincRNA	KNOWN	RP11-206L10.9	20	7	0.495301
chr1	800879	817712	809295	ENSG00000230092.7	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-206L10.8	2	5	0.306893
chr1	817371	819837	818604	ENSG00000177757.2	+	lincRNA	KNOWN	FAM87B	1	2	0.086793
chr1	825138	859446	842292	ENSG00000228794.8	+	processed_transcript	KNOWN	LINC01128	15	6	0.565358
chr1	826206	827522	826864	ENSG00000225880.5	-	lincRNA	KNOWN	LINC00115	1	1	0.086793
chr1	868071	876903	872487	ENSG00000230368.2	-	lincRNA	KNOWN	FAM41C	3	4	0.526183
chr1	873292	874349	873820	ENSG00000234711.1	+	unprocessed_pseudogene	KNOWN	TUBB8P11	1	1	0.565408
chr1	874529	877234	875881	ENSG00000283040.1	-	transcribed_unprocessed_pseudogene	KNOWN	FAM166AP3	1	5	0.565408
chr1	904834	915976	910405	ENSG00000272438.1	+	lincRNA	KNOWN	RP11-54O7.16	1	2	0.888489
chr1	911435	914948	913191	ENSG00000230699.2	+	lincRNA	KNOWN	RP11-54O7.1	1	2	1.330459
chr1	914171	914971	914571	ENSG00000241180.1	+	lincRNA	KNOWN	RP11-54O7.2	1	2	1.330459
chr1	916865	921016	918940	ENSG00000223764.2	-	lincRNA	KNOWN	RP11-54O7.3	3	4	1.330459
chr1	924880	944581	934730	ENSG00000187634.10	+	protein_coding	KNOWN	SAMD11	17	14	1.504144
chr1	944204	959309	951756	ENSG00000188976.10	-	protein_coding	KNOWN	NOC2L	6	19	1.448039
chr1	960587	965715	963151	ENSG00000187961.13	+	protein_coding	KNOWN	KLHL17	5	12	1.375164
chr1	965110	965166	965138	ENSG00000277294.1	+	miRNA	NOVEL	AL645608.1	1	1	1.375164
chr1	966497	975865	971181	ENSG00000187583.10	+	protein_coding	KNOWN	PLEKHN1	5	16	1.421902
chr1	975204	982093	978648	ENSG00000187642.9	-	protein_coding	KNOWN	PERM1	3	5	1.449804
chr1	995966	998051	997008	ENSG00000272512.1	-	lincRNA	KNOWN	RP11-54O7.17	1	1	1.449062
chr1	998962	1000172	999567	ENSG00000188290.10	-	protein_coding	KNOWN	HES4	4	4	1.449062
chr1	1001138	1014541	1007839	ENSG00000187608.8	+	protein_coding	KNOWN	ISG15	3	3	1.380180
chr1	1008076	1008229	1008152	ENSG00000231702.2	-	processed_pseudogene	KNOWN	RP11-54O7.10	1	1	1.449062
chr1	1011997	1013193	1012595	ENSG00000224969.1	-	antisense	KNOWN	RP11-54O7.11	1	2	1.245797
chr1	1020123	1056118	1038120	ENSG00000188157.13	+	protein_coding	KNOWN	AGRN	10	39	1.462671
chr1	1055033	1056116	1055574	ENSG00000242590.1	+	sense_intronic	KNOWN	RP11-54O7.14	1	2	1.770854
chr1	1059734	1069355	1064544	ENSG00000217801.9	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-465B22.3	6	10	1.770854
chr1	1062208	1063288	1062748	ENSG00000273443.1	-	lincRNA	KNOWN	RP11-54O7.18	1	2	1.770854
chr1	1070966	1074307	1072636	ENSG00000237330.2	-	protein_coding	KNOWN	RNF223	1	2	1.535438
chr1	1081818	1116361	1099089	ENSG00000131591.17	-	protein_coding	KNOWN	C1orf159	19	12	1.407561
chr1	1137017	1144056	1140536	ENSG00000223823.1	+	lincRNA	KNOWN	LINC01342	1	3	1.399524
chr1	1167092	1167202	1167147	ENSG00000207730.2	+	miRNA	KNOWN	MIR200B	1	1	1.579041
chr1	1167846	1167956	1167901	ENSG00000207607.2	+	miRNA	KNOWN	MIR200A	1	1	1.579041
chr1	1169005	1169087	1169046	ENSG00000198976.1	+	miRNA	KNOWN	MIR429	1	1	1.579041
chr1	1169357	1170343	1169850	ENSG00000272141.1	+	lincRNA	KNOWN	RP11-465B22.8	1	1	1.486706
chr1	1173056	1179555	1176305	ENSG00000205231.1	-	antisense	KNOWN	TTLL10-AS1	1	2	1.314384
chr1	1173884	1197935	1185909	ENSG00000162571.13	+	protein_coding	KNOWN	TTLL10	7	16	1.205300
chr1	1203508	1206691	1205099	ENSG00000186891.13	-	protein_coding	KNOWN	TNFRSF18	4	5	0.983793
chr1	1211326	1214138	1212732	ENSG00000186827.10	-	protein_coding	KNOWN	TNFRSF4	3	7	1.514524
chr1	1216908	1232031	1224469	ENSG00000078808.16	-	protein_coding	KNOWN	SDF4	7	7	1.500452
chr1	1232265	1235041	1233653	ENSG00000176022.4	+	protein_coding	KNOWN	B3GALT6	1	1	1.409792
chr1	1242446	1246722	1244584	ENSG00000184163.3	-	protein_coding	KNOWN	FAM132A	5	8	1.409792
chr1	1249777	1251334	1250555	ENSG00000260179.1	-	lincRNA	KNOWN	RP5-902P8.12	1	1	1.590346
chr1	1253909	1273885	1263897	ENSG00000160087.20	-	protein_coding	KNOWN	UBE2J2	20	8	1.548755
chr1	1275223	1280420	1277821	ENSG00000230415.1	+	lincRNA	KNOWN	RP5-902P8.10	2	3	1.252228
chr1	1280436	1292029	1286232	ENSG00000162572.19	+	protein_coding	KNOWN	SCNN1D	9	18	1.359674
chr1	1292376	1309609	1300992	ENSG00000131584.18	-	protein_coding	KNOWN	ACAP3	13	24	1.865837
chr1	1296110	1296170	1296140	ENSG00000278073.1	-	miRNA	KNOWN	MIR6726	1	1	1.865837
chr1	1308567	1311677	1310122	ENSG00000169972.11	+	protein_coding	KNOWN	PUSL1	5	8	1.818539
chr1	1311585	1324691	1318138	ENSG00000127054.18	-	protein_coding	KNOWN	CPSF3L	51	19	1.778176
chr1	1312502	1312566	1312534	ENSG00000274153.1	-	miRNA	KNOWN	MIR6727	1	1	1.778176
chr1	1317581	1318689	1318135	ENSG00000240731.1	-	sense_intronic	KNOWN	RP5-890O3.9	1	2	1.778176
chr1	1324756	1328897	1326826	ENSG00000224051.6	+	protein_coding	KNOWN	CPTP	3	3	1.778176
chr1	1331314	1335306	1333310	ENSG00000169962.4	+	protein_coding	KNOWN	TAS1R3	1	6	1.412191
chr1	1335276	1349350	1342313	ENSG00000107404.17	-	protein_coding	KNOWN	DVL1	8	15	1.412191
chr1	1339650	1339708	1339679	ENSG00000275884.1	-	miRNA	KNOWN	MIR6808	1	1	1.412191
chr1	1352689	1361777	1357233	ENSG00000162576.16	-	protein_coding	KNOWN	MXRA8	10	10	1.810221
chr1	1373730	1375495	1374612	ENSG00000175756.13	-	protein_coding	KNOWN	AURKAIP1	6	4	1.546955
chr1	1378666	1379032	1378849	ENSG00000223663.2	+	processed_pseudogene	KNOWN	RP5-890O3.3	1	1	1.546955
chr1	1385711	1399328	1392519	ENSG00000221978.11	-	protein_coding	KNOWN	CCNL2	20	13	1.487597
chr1	1399522	1402046	1400784	ENSG00000224870.6	+	processed_transcript	KNOWN	RP4-758J18.2	8	3	1.460313
chr1	1401908	1407313	1404610	ENSG00000242485.5	-	protein_coding	KNOWN	MRPL20	6	4	1.460313
chr1	1405460	1405752	1405606	ENSG00000264293.2	-	misc_RNA	KNOWN	RN7SL657P	1	1	1.460313
chr1	1409096	1410618	1409857	ENSG00000272455.1	+	lincRNA	KNOWN	RP4-758J18.13	1	1	1.357481
chr1	1418420	1421769	1420094	ENSG00000235098.8	-	protein_coding	KNOWN	ANKRD65	5	4	1.207469
chr1	1420245	1422691	1421468	ENSG00000225905.1	+	antisense	KNOWN	RP4-758J18.7	1	2	1.207469
chr1	1426128	1427787	1426957	ENSG00000205116.3	+	protein_coding	KNOWN	TMEM88B	1	2	1.207469
chr1	1430539	1434573	1432556	ENSG00000225285.1	-	lincRNA	KNOWN	RP4-758J18.10	4	2	1.209732
chr1	1434861	1442882	1438871	ENSG00000179403.11	+	protein_coding	KNOWN	VWA1	4	3	1.209732
chr1	1449689	1470158	1459923	ENSG00000215915.9	+	protein_coding	KNOWN	ATAD3C	3	12	1.364839
chr1	1471769	1497848	1484808	ENSG00000160072.19	+	protein_coding	KNOWN	ATAD3B	5	16	1.314314
chr1	1512151	1534687	1523419	ENSG00000197785.13	+	protein_coding	KNOWN	ATAD3A	7	16	1.263799
chr1	1535174	1540453	1537813	ENSG00000205090.8	-	protein_coding	KNOWN	TMEM240	3	5	1.270962
chr1	1541673	1574869	1558271	ENSG00000160075.11	-	protein_coding	KNOWN	SSU72	4	5	1.331141
chr1	1574975	1577075	1576025	ENSG00000215014.4	+	lincRNA	KNOWN	RP5-832C2.5	1	1	1.019962
chr1	1579756	1580046	1579901	ENSG00000279244.1	+	protein_coding	KNOWN	AL645728.1	1	3	1.019962
chr1	1583510	1583909	1583709	ENSG00000274481.1	-	processed_pseudogene	KNOWN	RP11-345P4.11	1	1	1.019962
chr1	1589065	1589350	1589207	ENSG00000280747.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.019962
chr1	1598012	1600096	1599054	ENSG00000228594.3	-	protein_coding	KNOWN	C1orf233	1	1	1.045922
chr1	1613758	1615795	1614776	ENSG00000272106.1	-	antisense	KNOWN	RP11-345P4.9	1	1	1.069693
chr1	1615415	1630610	1623012	ENSG00000197530.12	+	protein_coding	KNOWN	MIB2	32	21	1.092113
chr1	1632095	1701810	1666952	ENSG00000189409.12	+	protein_coding	KNOWN	MMP23B	12	8	1.239294
chr1	1635227	1659012	1647119	ENSG00000248333.8	-	protein_coding	KNOWN	CDK11B	9	22	1.385896
chr1	1659325	1662602	1660963	ENSG00000272004.1	+	antisense	KNOWN	RP11-345P4.10	1	2	0.990296
chr1	1659529	1692728	1676128	ENSG00000189339.11	-	protein_coding	KNOWN	SLC35E2B	5	10	1.123716
chr1	1671990	1673411	1672700	ENSG00000269737.1	+	antisense	KNOWN	RP11-345P4.7	1	1	1.188853
chr1	1673275	1674397	1673836	ENSG00000269227.1	+	transcribed_processed_pseudogene	KNOWN	RP11-345P4.6	1	2	1.188853
chr1	1699942	1701782	1700862	ENSG00000215914.4	+	unprocessed_pseudogene	KNOWN	MMP23A	1	7	1.158225
chr1	1702730	1724324	1713527	ENSG00000008128.22	-	protein_coding	KNOWN	CDK11A	23	20	1.083902
chr1	1702736	1737688	1720212	ENSG00000268575.1	-	processed_transcript	KNOWN	RP1-283E3.8	1	20	1.089952
chr1	1724512	1737251	1730881	ENSG00000227775.3	+	transcribed_processed_pseudogene	KNOWN	RP1-283E3.4	4	2	1.099193
chr1	1724838	1745992	1735415	ENSG00000215790.6	-	protein_coding	KNOWN	SLC35E2	3	7	1.116582
chr1	1751232	1780457	1765844	ENSG00000008130.15	-	protein_coding	KNOWN	NADK	17	14	1.124585
chr1	1785285	1891117	1838201	ENSG00000078369.17	-	protein_coding	KNOWN	GNB1	10	12	0.751157
chr1	1891471	1892658	1892064	ENSG00000231050.1	+	antisense	KNOWN	RP1-140A9.1	1	2	1.030991
chr1	1914827	1917296	1916061	ENSG00000169885.9	+	protein_coding	KNOWN	CALML6	4	6	1.290218
chr1	1917590	1919273	1918431	ENSG00000178821.12	-	protein_coding	KNOWN	TMEM52	6	5	1.290218
chr1	1921951	2003837	1962894	ENSG00000142609.17	-	protein_coding	KNOWN	CFAP74	9	38	0.981702
chr1	2013213	2015530	2014371	ENSG00000233542.1	-	antisense	KNOWN	RP11-547D24.1	1	2	0.731402
chr1	2019324	2030751	2025037	ENSG00000187730.7	+	protein_coding	KNOWN	GABRD	1	9	0.745521
chr1	2049203	2050070	2049636	ENSG00000226969.1	-	antisense	KNOWN	RP11-547D24.3	2	3	0.932771
chr1	2050470	2185395	2117932	ENSG00000067606.15	+	protein_coding	KNOWN	PRKCZ	27	18	0.942765
chr1	2141084	2145279	2143181	ENSG00000271806.1	-	antisense	KNOWN	RP5-892K4.1	1	1	1.013238
chr1	2181794	2184389	2183091	ENSG00000182873.5	-	antisense	KNOWN	RP11-181G12.2	2	3	1.178352
chr1	2184461	2212720	2198590	ENSG00000162585.16	-	protein_coding	KNOWN	FAAP20	15	8	1.060607
chr1	2212523	2220738	2216630	ENSG00000234396.3	+	lincRNA	KNOWN	RP11-181G12.4	1	2	0.987022
chr1	2222427	2222500	2222463	ENSG00000277082.1	-	miRNA	NOVEL	AL590822.1	1	1	0.987022
chr1	2228695	2310119	2269407	ENSG00000157933.9	+	protein_coding	KNOWN	SKI	4	7	1.063451
chr1	2321253	2391707	2356480	ENSG00000116151.13	-	protein_coding	KNOWN	MORN1	11	14	1.025265
chr1	2326201	2326693	2326447	ENSG00000272161.1	-	sense_intronic	KNOWN	RP4-713A8.1	1	1	1.440656
chr1	2350414	2352820	2351617	ENSG00000269896.2	-	transcribed_processed_pseudogene	KNOWN	RP4-740C4.5	2	1	1.109374
chr1	2363061	2363628	2363344	ENSG00000272420.1	-	sense_intronic	KNOWN	RP4-740C4.7	1	1	1.109374
chr1	2391775	2405444	2398609	ENSG00000157916.18	+	protein_coding	KNOWN	RER1	10	8	0.886131
chr1	2403964	2413797	2408880	ENSG00000157911.9	-	protein_coding	KNOWN	PEX10	8	6	0.984409
chr1	2425980	2505530	2465755	ENSG00000149527.17	+	protein_coding	KNOWN	PLCH2	8	22	1.053621
chr1	2492300	2493258	2492779	ENSG00000224387.1	-	antisense	KNOWN	RP3-395M20.2	1	2	0.831756
chr1	2493437	2494479	2493958	ENSG00000229393.1	-	antisense	KNOWN	RP3-395M20.3	1	2	0.831756
chr1	2508533	2526628	2517580	ENSG00000157881.13	-	protein_coding	KNOWN	PANK4	12	19	1.353711
chr1	2528745	2530245	2529495	ENSG00000197921.5	-	protein_coding	KNOWN	HES5	1	3	1.354825
chr1	2546465	2547460	2546962	ENSG00000272449.1	+	lincRNA	KNOWN	RP3-395M20.12	1	1	1.125939
chr1	2549920	2557031	2553475	ENSG00000238164.6	-	antisense	KNOWN	RP3-395M20.8	6	6	1.255594
chr1	2555639	2565382	2560510	ENSG00000157873.17	+	protein_coding	KNOWN	TNFRSF14	16	8	1.257051
chr1	2566410	2569888	2568149	ENSG00000225931.3	+	TEC	KNOWN	RP3-395M20.7	1	3	1.257051
chr1	2581560	2584533	2583046	ENSG00000228037.1	+	lincRNA	KNOWN	RP3-395M20.9	1	3	1.110728
chr1	2586491	2591469	2588980	ENSG00000157870.14	+	protein_coding	KNOWN	FAM213B	15	7	1.082088
chr1	2590639	2632990	2611814	ENSG00000142606.15	-	protein_coding	KNOWN	MMEL1	9	24	0.888467
chr1	2632568	2636620	2634594	ENSG00000237058.1	+	antisense	KNOWN	RP13-436F16.1	1	2	0.750203
chr1	2635976	2789755	2712865	ENSG00000215912.11	-	protein_coding	KNOWN	TTC34	1	7	0.502889
chr1	2811850	2812692	2812271	ENSG00000233234.1	-	lincRNA	KNOWN	RP11-740P5.2	1	2	0.884187
chr1	2814432	2814998	2814715	ENSG00000231630.1	-	lincRNA	KNOWN	RP11-740P5.3	1	2	0.884187
chr1	3021483	3022903	3022193	ENSG00000169717.6	+	protein_coding	KNOWN	ACTRT2	1	1	1.072092
chr1	3059615	3068437	3064026	ENSG00000177133.10	-	antisense	KNOWN	LINC00982	8	7	0.331283
chr1	3069168	3438621	3253894	ENSG00000142611.16	+	protein_coding	KNOWN	PRDM16	10	17	0.742718
chr1	3132927	3133709	3133318	ENSG00000226286.1	-	antisense	KNOWN	RP1-163G9.2	1	2	0.644533
chr1	3205988	3208664	3207326	ENSG00000279839.1	+	TEC	KNOWN	RP11-193J6.1	1	1	0.554817
chr1	3306636	3310096	3308366	ENSG00000272235.1	-	lincRNA	KNOWN	RP11-22L13.1	1	1	0.723612
chr1	3454426	3481113	3467769	ENSG00000130762.14	+	protein_coding	KNOWN	ARHGEF16	7	15	1.091637
chr1	3487246	3487627	3487436	ENSG00000272088.1	+	lincRNA	KNOWN	RP11-168F9.2	1	1	1.337971
chr1	3489920	3611495	3550707	ENSG00000162591.15	-	protein_coding	KNOWN	MEGF6	7	37	1.325893
chr1	3560695	3560790	3560742	ENSG00000207776.1	-	miRNA	KNOWN	MIR551A	1	1	1.520282
chr1	3623190	3624743	3623966	ENSG00000238260.1	-	antisense	KNOWN	RP11-46F15.2	1	3	1.191527
chr1	3625002	3630127	3627564	ENSG00000158109.14	+	protein_coding	KNOWN	TPRG1L	2	5	1.184430
chr1	3630767	3652761	3641764	ENSG00000116213.15	-	protein_coding	KNOWN	WRAP73	10	12	0.880793
chr1	3652520	3736201	3694360	ENSG00000078900.14	+	protein_coding	KNOWN	TP73	14	14	0.881929
chr1	3658938	3668772	3663855	ENSG00000227589.1	-	antisense	KNOWN	RP5-1092A11.5	1	3	0.695639
chr1	3712200	3714298	3713249	ENSG00000235131.1	-	antisense	KNOWN	RP5-1092A11.2	1	2	1.072256
chr1	3735601	3747336	3741468	ENSG00000227372.10	-	antisense	KNOWN	TP73-AS1	8	6	0.785745
chr1	3736943	3737103	3737023	ENSG00000276189.1	+	misc_RNA	NOVEL	TP73-AS1	1	1	0.785745
chr1	3752398	3771645	3762021	ENSG00000162592.8	+	protein_coding	KNOWN	CCDC27	2	12	0.959470
chr1	3772788	3775982	3774385	ENSG00000235169.7	+	protein_coding	KNOWN	SMIM1	3	4	1.275299
chr1	3778558	3796504	3787531	ENSG00000130764.9	-	protein_coding	KNOWN	LRRC47	3	7	1.199884
chr1	3782815	3783111	3782963	ENSG00000266075.2	+	misc_RNA	KNOWN	RN7SL574P	1	1	1.275299
chr1	3785008	3785538	3785273	ENSG00000272153.1	+	antisense	KNOWN	RP1-286D6.5	1	1	1.275299
chr1	3812081	3857214	3834647	ENSG00000116198.12	-	protein_coding	KNOWN	CEP104	11	22	0.510758
chr1	3857267	3885429	3871348	ENSG00000169598.15	+	protein_coding	KNOWN	DFFB	12	8	0.688539
chr1	3889125	3900293	3894709	ENSG00000198912.10	-	protein_coding	KNOWN	C1orf174	3	5	0.481288
chr1	3900372	3917225	3908798	ENSG00000236423.5	+	lincRNA	KNOWN	LINC01134	3	4	0.469673
chr1	3940565	3955262	3947913	ENSG00000233304.6	+	lincRNA	KNOWN	LINC01346	3	3	0.493284
chr1	3944547	3948980	3946763	ENSG00000226374.2	-	lincRNA	KNOWN	RP13-614K11.2	3	6	0.504894
chr1	4175528	4175899	4175713	ENSG00000229280.1	-	processed_pseudogene	KNOWN	EEF1DP6	1	1	0.187751
chr1	4412027	4424689	4418358	ENSG00000235054.3	+	lincRNA	KNOWN	RP5-1166F10.1	5	6	-0.009546
chr1	4551735	4552145	4551940	ENSG00000227169.2	-	lincRNA	KNOWN	RP1-37J18.1	1	2	0.012703
chr1	4571481	4594009	4582745	ENSG00000232596.2	+	lincRNA	KNOWN	RP1-37J18.2	3	5	0.088291
chr1	4654732	4792534	4723633	ENSG00000196581.10	+	protein_coding	KNOWN	AJAP1	3	6	0.381230
chr1	4892068	4892162	4892115	ENSG00000277731.1	-	miRNA	NOVEL	AL137795.1	1	1	-0.649372
chr1	5086459	5090899	5088679	ENSG00000231510.1	-	lincRNA	KNOWN	RP11-542C10.1	1	4	-0.183943
chr1	5492978	5494674	5493826	ENSG00000260972.1	+	lincRNA	KNOWN	RP1-58B11.1	1	1	0.302466
chr1	5564071	5564143	5564107	ENSG00000264341.1	+	miRNA	KNOWN	MIR4417	1	1	-0.320331
chr1	5587368	5668295	5627831	ENSG00000236948.1	-	lincRNA	KNOWN	RP11-154H17.1	1	2	0.131921
chr1	5815871	5815959	5815915	ENSG00000216045.2	-	miRNA	NOVEL	AL356693.1	1	1	0.179939
chr1	5862672	5862741	5862706	ENSG00000264101.1	-	miRNA	KNOWN	MIR4689	1	1	0.726039
chr1	5862811	5992473	5927642	ENSG00000131697.17	-	protein_coding	KNOWN	NPHP4	11	33	0.501970
chr1	5893839	5893924	5893881	ENSG00000266687.1	-	miRNA	NOVEL	AL356261.1	1	1	0.742478
chr1	5991466	6101193	6046329	ENSG00000069424.14	+	protein_coding	KNOWN	KCNAB2	19	16	0.689095
chr1	6101793	6180123	6140958	ENSG00000116254.17	-	protein_coding	KNOWN	CHD5	6	42	0.826423
chr1	6181269	6209389	6195329	ENSG00000116251.9	-	protein_coding	KNOWN	RPL22	8	5	0.936685
chr1	6204840	6205780	6205310	ENSG00000226944.1	-	antisense	KNOWN	RP1-120G22.11	1	3	0.946561
chr1	6205475	6221299	6213387	ENSG00000158286.12	+	protein_coding	KNOWN	RNF207	9	18	0.945808
chr1	6221193	6235972	6228582	ENSG00000116237.15	-	protein_coding	KNOWN	ICMT	4	6	0.925739
chr1	6236240	6239444	6237842	ENSG00000225077.2	+	lincRNA	KNOWN	LINC00337	2	5	0.896596
chr1	6244192	6245578	6244885	ENSG00000173673.7	+	protein_coding	KNOWN	HES3	1	4	0.896596
chr1	6247346	6260975	6254160	ENSG00000158292.6	-	protein_coding	KNOWN	GPR153	1	6	1.024960
chr1	6264269	6394391	6329330	ENSG00000097021.19	-	protein_coding	KNOWN	ACOT7	10	10	0.912783
chr1	6393555	6394391	6393973	ENSG00000271746.1	+	antisense	KNOWN	RP1-202O8.3	1	1	0.862510
chr1	6412418	6424670	6418544	ENSG00000069812.11	-	protein_coding	KNOWN	HES2	6	4	0.707456
chr1	6424788	6461370	6443079	ENSG00000187017.14	+	protein_coding	KNOWN	ESPN	15	13	0.871125
chr1	6429834	6429896	6429865	ENSG00000265392.1	-	miRNA	KNOWN	MIR4252	1	1	0.707456
chr1	6443034	6447006	6445020	ENSG00000231868.1	-	antisense	KNOWN	RP1-202O8.2	1	3	0.862234
chr1	6461151	6466195	6463673	ENSG00000215788.9	-	protein_coding	KNOWN	TNFRSF25	20	10	0.961769
chr1	6466092	6520061	6493076	ENSG00000171680.20	-	protein_coding	KNOWN	PLEKHG5	12	22	0.969981
chr1	6521347	6554535	6537941	ENSG00000162408.10	-	protein_coding	KNOWN	NOL9	5	12	0.832020
chr1	6540854	6540964	6540909	ENSG00000253022.1	+	snRNA	KNOWN	RNU6-731P	1	1	0.860262
chr1	6547905	6548619	6548262	ENSG00000229519.2	+	processed_pseudogene	KNOWN	RP11-58A11.2	1	2	0.860262
chr1	6555181	6579757	6567469	ENSG00000173662.19	+	protein_coding	KNOWN	TAS1R1	5	6	0.716540
chr1	6580001	6589280	6584640	ENSG00000204859.11	+	protein_coding	KNOWN	ZBTB48	9	11	0.659032
chr1	6590724	6614607	6602665	ENSG00000162413.16	-	protein_coding	KNOWN	KLHL21	6	4	0.912273
chr1	6613685	6624033	6618859	ENSG00000116273.5	+	protein_coding	KNOWN	PHF13	2	4	0.871304
chr1	6624866	6635586	6630226	ENSG00000041988.15	+	protein_coding	KNOWN	THAP3	8	6	0.762819
chr1	6634168	6701924	6668046	ENSG00000007923.15	-	protein_coding	KNOWN	DNAJC11	11	16	0.516296
chr1	6724637	6730012	6727324	ENSG00000228750.6	+	lincRNA	KNOWN	RP11-242F24.1	5	3	0.277744
chr1	6783892	6784843	6784367	ENSG00000237436.1	-	antisense	KNOWN	RP11-312B8.1	1	3	0.219104
chr1	6785324	7769706	7277515	ENSG00000171735.18	+	protein_coding	KNOWN	CAMTA1	16	23	0.339723
chr1	6834333	6834618	6834475	ENSG00000227950.1	-	processed_pseudogene	KNOWN	RP11-312B8.2	1	1	0.100709
chr1	7008376	7014279	7011327	ENSG00000237365.1	-	antisense	KNOWN	RP11-334N17.1	1	2	0.414664
chr1	7219360	7219524	7219442	ENSG00000207056.1	+	snRNA	KNOWN	RNU1-8P	1	1	-0.409889
chr1	7264193	7264277	7264235	ENSG00000280801.1	+	miRNA	NOVEL	Z98052.1	1	1	0.318127
chr1	7368942	7370270	7369606	ENSG00000237402.1	+	sense_intronic	KNOWN	CAMTA1-IT1	1	2	0.476034
chr1	7382487	7389754	7386120	ENSG00000237728.2	-	antisense	KNOWN	RP3-453P22.2	2	3	0.531756
chr1	7441096	7441554	7441325	ENSG00000225126.1	-	antisense	KNOWN	RP4-549F15.1	1	2	0.850174
chr1	7693124	7694844	7693984	ENSG00000270171.1	-	lincRNA	KNOWN	RP11-338N10.1	1	1	0.420046
chr1	7698303	7698872	7698587	ENSG00000270035.1	-	lincRNA	KNOWN	RP11-338N10.2	1	1	0.420046
chr1	7700704	7700970	7700837	ENSG00000269978.1	-	lincRNA	KNOWN	RP11-338N10.3	1	1	0.420046
chr1	7771269	7781432	7776350	ENSG00000049245.12	+	protein_coding	KNOWN	VAMP3	3	5	-0.003692
chr1	7776383	7776775	7776579	ENSG00000269925.1	+	sense_intronic	KNOWN	RP3-467L1.6	1	1	-0.003692
chr1	7784320	7845177	7814748	ENSG00000049246.14	+	protein_coding	KNOWN	PER3	9	23	0.067138
chr1	7810242	7827342	7818792	ENSG00000236266.1	-	antisense	KNOWN	RP3-467L1.4	1	3	0.074504
chr1	7843083	7853512	7848297	ENSG00000049247.13	-	protein_coding	KNOWN	UTS2	3	7	-0.153029
chr1	7915894	7943165	7929529	ENSG00000049249.8	-	protein_coding	KNOWN	TNFRSF9	4	9	0.142021
chr1	7942372	7942726	7942549	ENSG00000270330.1	+	processed_pseudogene	KNOWN	RP5-892F13.2	1	1	0.176654
chr1	7954291	7985505	7969898	ENSG00000116288.12	+	protein_coding	KNOWN	PARK7	10	7	0.298174
chr1	7982881	7982983	7982932	ENSG00000200344.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.456266
chr1	8004404	8026308	8015356	ENSG00000116285.12	-	protein_coding	KNOWN	ERRFI1	5	4	0.484888
chr1	8026738	8122702	8074720	ENSG00000238290.1	+	lincRNA	KNOWN	RP11-431K24.1	1	3	0.412521
chr1	8057245	8058463	8057854	ENSG00000232848.1	-	processed_pseudogene	KNOWN	CTA-215D11.4	1	2	0.609976
chr1	8189824	8192770	8191297	ENSG00000229305.1	+	processed_pseudogene	KNOWN	RP11-431K24.2	1	4	0.474335
chr1	8202429	8215210	8208819	ENSG00000227634.2	+	lincRNA	KNOWN	RP11-431K24.3	2	4	0.645407
chr1	8206434	8206597	8206515	ENSG00000200975.1	-	snRNA	KNOWN	RNU1-7P	1	1	0.487920
chr1	8218190	8220529	8219359	ENSG00000233645.1	-	lincRNA	KNOWN	RP11-431K24.4	1	2	0.874187
chr1	8292157	8292263	8292210	ENSG00000251977.1	-	snRNA	KNOWN	RNU6-991P	1	1	0.255182
chr1	8317826	8344167	8330996	ENSG00000162426.14	+	protein_coding	KNOWN	SLC45A1	4	9	0.450764
chr1	8328067	8328179	8328123	ENSG00000252254.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.642861
chr1	8352397	8817643	8585020	ENSG00000142599.17	-	protein_coding	KNOWN	RERE	18	24	0.305630
chr1	8424645	8434838	8429741	ENSG00000232912.5	+	antisense	KNOWN	RP5-1115A15.1	2	4	0.378918
chr1	8511795	8511919	8511857	ENSG00000221083.1	-	snoRNA	NOVEL	SNORA77	1	1	0.632560
chr1	8512653	8513021	8512837	ENSG00000270282.1	+	processed_pseudogene	KNOWN	RP5-1115A15.2	1	1	0.632560
chr1	8512985	8513065	8513025	ENSG00000280851.1	-	miRNA	NOVEL	AL096855.1	1	1	0.632560
chr1	8750430	8751087	8750758	ENSG00000234619.1	+	processed_pseudogene	KNOWN	RPL7P11	1	1	0.203309
chr1	8786211	8786913	8786562	ENSG00000224315.2	-	processed_pseudogene	KNOWN	RPL7P7	1	1	0.345207
chr1	8796571	8796673	8796622	ENSG00000222511.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.131738
chr1	8798475	8799506	8798990	ENSG00000226545.1	+	unprocessed_pseudogene	KNOWN	RP4-633I8.3	1	2	0.131738
chr1	8805860	8807051	8806455	ENSG00000228423.2	-	lincRNA	KNOWN	RP4-633I8.4	1	2	0.131738
chr1	8831007	8831375	8831191	ENSG00000229716.2	+	processed_pseudogene	KNOWN	RPL23AP19	1	1	0.344912
chr1	8861002	8879249	8870125	ENSG00000074800.13	-	protein_coding	KNOWN	ENO1	6	12	0.994131
chr1	8862002	8862260	8862131	ENSG00000280816.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.944146
chr1	8866502	8866590	8866546	ENSG00000274258.1	-	miRNA	KNOWN	MIR6728	1	1	0.944146
chr1	8875788	8878007	8876897	ENSG00000236269.1	-	sense_intronic	KNOWN	ENO1-IT1	1	2	1.042748
chr1	8878835	8879894	8879364	ENSG00000230679.1	+	antisense	KNOWN	ENO1-AS1	1	2	1.042748
chr1	8883427	8883533	8883480	ENSG00000201725.1	-	snRNA	KNOWN	RNU6-304P	1	1	1.042748
chr1	8893409	8894151	8893780	ENSG00000238249.2	+	processed_pseudogene	KNOWN	HMGN2P17	1	1	0.319402
chr1	8907393	8907744	8907568	ENSG00000232208.2	-	processed_pseudogene	KNOWN	RP3-477M7.5	1	1	0.319402
chr1	8909742	8909904	8909823	ENSG00000232663.2	+	processed_pseudogene	KNOWN	RP3-477M7.6	1	1	0.319402
chr1	8945867	8975092	8960479	ENSG00000131686.14	+	protein_coding	KNOWN	CA6	6	8	0.421449
chr1	8979576	8979874	8979725	ENSG00000265141.2	-	misc_RNA	KNOWN	RN7SL451P	1	1	0.400745
chr1	9003300	9026345	9014822	ENSG00000197241.3	-	protein_coding	KNOWN	SLC2A7	1	12	0.703315
chr1	9035107	9088478	9061792	ENSG00000142583.17	-	protein_coding	KNOWN	SLC2A5	10	12	0.426448
chr1	9082696	9082879	9082787	ENSG00000252404.1	+	scaRNA	NOVEL	SCARNA16	1	1	0.242551
chr1	9082803	9082880	9082841	ENSG00000281506.1	+	miRNA	NOVEL	AL158048.1	1	1	0.242551
chr1	9100305	9129170	9114737	ENSG00000180758.11	-	protein_coding	KNOWN	GPR157	3	4	0.622785
chr1	9148011	9196983	9172497	ENSG00000228526.4	-	lincRNA	KNOWN	MIR34AHG	3	2	0.891920
chr1	9151668	9151777	9151722	ENSG00000207865.1	-	miRNA	KNOWN	MIR34A	1	1	0.870360
chr1	9182004	9196284	9189144	ENSG00000234546.3	+	lincRNA	KNOWN	RP3-510D11.2	3	3	0.840710
chr1	9197143	9198906	9198024	ENSG00000281937.1	-	lincRNA	KNOWN	RP3-510D11.4	1	1	0.514225
chr1	9234775	9271337	9253056	ENSG00000049239.12	+	protein_coding	KNOWN	H6PD	3	5	0.784779
chr1	9292880	9369532	9331206	ENSG00000171621.13	+	protein_coding	KNOWN	SPSB1	4	3	0.806158
chr1	9437669	9437778	9437723	ENSG00000252956.1	-	rRNA	KNOWN	RNA5SP40	1	1	0.407634
chr1	9501092	9503471	9502281	ENSG00000235263.1	-	lincRNA	KNOWN	RP13-392I16.1	1	2	0.319884
chr1	9539482	9585179	9562330	ENSG00000171612.6	+	protein_coding	KNOWN	SLC25A33	1	7	0.422184
chr1	9576427	9576985	9576706	ENSG00000231181.1	+	processed_pseudogene	KNOWN	RP13-15M17.1	1	1	0.201616
chr1	9588922	9614873	9601897	ENSG00000188807.12	+	protein_coding	KNOWN	TMEM201	5	11	0.704773
chr1	9651732	9729114	9690423	ENSG00000171608.15	+	protein_coding	KNOWN	PIK3CD	8	25	0.715500
chr1	9652610	9654586	9653598	ENSG00000179840.5	-	antisense	KNOWN	PIK3CD-AS1	1	2	0.486964
chr1	9660828	9662626	9661727	ENSG00000233268.3	-	processed_pseudogene	KNOWN	RP11-558F24.2	1	2	0.486964
chr1	9672426	9687555	9679990	ENSG00000231789.2	-	antisense	KNOWN	PIK3CD-AS2	1	3	0.673634
chr1	9729026	9824526	9776776	ENSG00000171603.16	-	protein_coding	KNOWN	CLSTN1	5	19	0.706523
chr1	9780822	9781240	9781031	ENSG00000271264.1	+	processed_pseudogene	KNOWN	MZT1P1	1	2	0.363064
chr1	9827610	9828258	9827934	ENSG00000280113.1	-	protein_coding	KNOWN	AL357140.1	1	1	0.702377
chr1	9848276	9910336	9879306	ENSG00000178585.14	-	protein_coding	KNOWN	CTNNBIP1	4	6	0.830738
chr1	9848318	9850154	9849236	ENSG00000223989.1	+	antisense	KNOWN	RP11-84A14.5	1	3	0.837875
chr1	9922113	9943407	9932760	ENSG00000162441.11	-	protein_coding	KNOWN	LZIC	5	8	0.455855
chr1	9942923	9949974	9946448	ENSG00000228150.1	+	sense_intronic	KNOWN	RP11-84A14.4	1	2	0.406688
chr1	9943428	9985501	9964464	ENSG00000173614.13	+	protein_coding	KNOWN	NMNAT1	5	6	0.530024
chr1	9947318	9947636	9947477	ENSG00000202415.1	+	misc_RNA	KNOWN	RN7SKP269	1	1	0.406688
chr1	9967381	9967458	9967419	ENSG00000265521.1	+	miRNA	KNOWN	MIR5697	1	1	0.564060
chr1	9983141	9984568	9983854	ENSG00000241326.1	+	sense_intronic	KNOWN	RP11-807G9.2	1	2	0.538393
chr1	9997206	10016020	10006613	ENSG00000162444.11	+	protein_coding	KNOWN	RBP7	2	5	0.270366
chr1	10032832	10181239	10107035	ENSG00000130939.18	+	protein_coding	KNOWN	UBE4B	10	28	0.538381
chr1	10054445	10054781	10054613	ENSG00000224340.1	-	processed_pseudogene	KNOWN	RP11-496H15.2	1	1	0.741495
chr1	10058671	10059648	10059159	ENSG00000233623.2	+	processed_pseudogene	KNOWN	PGAM1P11	1	2	0.741495
chr1	10163268	10163374	10163321	ENSG00000201746.1	+	snRNA	KNOWN	RNU6-828P	1	1	0.452809
chr1	10210805	10381603	10296204	ENSG00000054523.17	+	protein_coding	KNOWN	KIF1B	13	49	0.279743
chr1	10227718	10227803	10227760	ENSG00000264881.1	+	miRNA	KNOWN	MIR1273D	1	1	0.420940
chr1	10298966	10299072	10299019	ENSG00000199562.1	+	snRNA	KNOWN	RNU6-37P	1	1	-0.151737
chr1	10306465	10306757	10306611	ENSG00000264501.2	+	misc_RNA	KNOWN	RN7SL731P	1	1	-0.151737
chr1	10398592	10420144	10409368	ENSG00000142657.20	+	protein_coding	KNOWN	PGD	10	13	0.455316
chr1	10429881	10430677	10430279	ENSG00000271989.1	-	antisense	KNOWN	RP4-736L20.3	1	1	0.741437
chr1	10430102	10452153	10441127	ENSG00000251503.8	+	protein_coding	KNOWN	APITD1-CORT	5	6	0.798587
chr1	10430443	10442809	10436626	ENSG00000175279.21	+	protein_coding	KNOWN	APITD1	5	5	0.822671
chr1	10449719	10451902	10450810	ENSG00000241563.3	+	protein_coding	KNOWN	CORT	1	2	0.607738
chr1	10456522	10472526	10464524	ENSG00000160049.11	-	protein_coding	KNOWN	DFFA	3	6	0.611687
chr1	10458555	10459338	10458946	ENSG00000203469.2	+	antisense	KNOWN	RP5-1113E3.3	1	2	0.576114
chr1	10472288	10630758	10551523	ENSG00000142655.12	+	protein_coding	KNOWN	PEX14	4	9	0.488925
chr1	10616836	10617115	10616975	ENSG00000243267.3	+	misc_RNA	KNOWN	RN7SL614P	1	1	0.574054
chr1	10636604	10796650	10716627	ENSG00000130940.14	-	protein_coding	KNOWN	CASZ1	9	21	0.702542
chr1	10639241	10654333	10646787	ENSG00000272078.1	+	antisense	KNOWN	RP4-734G22.3	1	2	0.889427
chr1	10895761	10895998	10895879	ENSG00000225158.2	+	processed_pseudogene	KNOWN	HSPE1P24	1	1	0.728757
chr1	10946471	10982037	10964254	ENSG00000175262.14	-	protein_coding	KNOWN	C1orf127	5	13	0.610617
chr1	10990978	10991797	10991387	ENSG00000215785.2	-	processed_pseudogene	KNOWN	CFL1P6	1	2	0.790990
chr1	10998176	10998263	10998219	ENSG00000264181.1	-	miRNA	NOVEL	AL713997.1	1	1	0.790990
chr1	10999862	10999945	10999903	ENSG00000281322.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.790990
chr1	11012344	11026420	11019382	ENSG00000120948.15	+	protein_coding	KNOWN	TARDBP	28	7	0.526223
chr1	11012662	11030528	11021595	ENSG00000277726.4	+	protein_coding	KNOWN	RP4-635E18.9	5	10	0.532355
chr1	11026523	11047233	11036878	ENSG00000009724.16	-	protein_coding	KNOWN	MASP2	4	11	0.698548
chr1	11029659	11030528	11030093	ENSG00000271895.2	+	antisense	KNOWN	RP4-635E18.8	2	2	0.652283
chr1	11054584	11060024	11057304	ENSG00000116649.9	-	protein_coding	KNOWN	SRM	6	8	0.995130
chr1	11066618	11099881	11083249	ENSG00000171824.13	-	protein_coding	KNOWN	EXOSC10	11	25	0.527071
chr1	11068471	11073097	11070784	ENSG00000226849.1	+	antisense	KNOWN	RP4-635E18.7	1	2	0.674689
chr1	11070091	11070353	11070222	ENSG00000281350.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.516641
chr1	11099675	11102100	11100887	ENSG00000230337.1	+	antisense	KNOWN	RP4-635E18.6	2	2	0.388041
chr1	11106535	11262507	11184521	ENSG00000198793.12	-	protein_coding	KNOWN	MTOR	7	58	0.493404
chr1	11143898	11149537	11146717	ENSG00000225602.5	+	antisense	KNOWN	MTOR-AS1	2	4	0.643007
chr1	11152350	11152452	11152401	ENSG00000253086.1	+	snRNA	KNOWN	RNU6-537P	1	1	0.674001
chr1	11189341	11195981	11192661	ENSG00000171819.4	+	protein_coding	KNOWN	ANGPTL7	2	5	0.539941
chr1	11226254	11226360	11226307	ENSG00000207451.1	+	snRNA	KNOWN	RNU6-291P	1	1	0.561477
chr1	11232963	11233112	11233037	ENSG00000238173.1	+	processed_pseudogene	KNOWN	RPL39P6	1	1	0.243995
chr1	11273206	11296049	11284627	ENSG00000120942.13	+	protein_coding	KNOWN	UBIAD1	4	5	0.379815
chr1	11278616	11279351	11278983	ENSG00000238199.1	-	processed_pseudogene	KNOWN	UBE2V2P3	1	2	0.423701
chr1	11425257	11425821	11425539	ENSG00000224338.2	-	processed_pseudogene	KNOWN	RP11-149P14.1	1	1	0.060965
chr1	11479166	11537584	11508375	ENSG00000204624.7	+	protein_coding	KNOWN	PTCHD2	3	21	0.310206
chr1	11609531	11613355	11611443	ENSG00000235643.1	+	lincRNA	KNOWN	RP1-69M21.2	1	3	0.443420
chr1	11648367	11655785	11652076	ENSG00000116661.9	-	protein_coding	KNOWN	FBXO2	5	6	0.698643
chr1	11654375	11663327	11658851	ENSG00000132879.13	+	protein_coding	KNOWN	FBXO44	9	7	0.749523
chr1	11664124	11674354	11669239	ENSG00000116663.10	+	protein_coding	KNOWN	FBXO6	3	6	0.789770
chr1	11674480	11691650	11683065	ENSG00000116670.14	-	protein_coding	KNOWN	MAD2L2	9	11	0.834302
chr1	11691729	11725857	11708793	ENSG00000162490.6	+	protein_coding	KNOWN	DRAXIN	1	7	0.767908
chr1	11736084	11754802	11745443	ENSG00000177674.15	+	protein_coding	KNOWN	AGTRAP	14	7	0.750659
chr1	11761787	11789585	11775686	ENSG00000215910.7	+	protein_coding	KNOWN	C1orf167	7	21	0.989704
chr1	11777077	11779619	11778348	ENSG00000177553.6	-	antisense	KNOWN	RP11-56N19.5	1	3	1.059811
chr1	11785723	11806920	11796321	ENSG00000177000.10	-	protein_coding	KNOWN	MTHFR	9	13	0.777599
chr1	11806096	11843144	11824620	ENSG00000011021.21	+	protein_coding	KNOWN	CLCN6	8	23	0.592493
chr1	11841017	11848079	11844548	ENSG00000242349.5	+	antisense	KNOWN	NPPA-AS1	2	4	0.776490
chr1	11843812	11843984	11843898	ENSG00000276470.1	+	misc_RNA	NOVEL	NPPA-AS1_1	1	1	0.776490
chr1	11845549	11845697	11845623	ENSG00000278852.1	+	misc_RNA	NOVEL	NPPA-AS1_2	1	1	0.776490
chr1	11845709	11848345	11847027	ENSG00000175206.10	-	protein_coding	KNOWN	NPPA	3	4	0.776490
chr1	11847442	11847549	11847495	ENSG00000275915.1	+	misc_RNA	NOVEL	NPPA-AS1_3	1	1	0.776490
chr1	11857464	11858931	11858197	ENSG00000120937.8	-	protein_coding	KNOWN	NPPB	1	3	0.767152
chr1	11877770	11880406	11879088	ENSG00000224904.1	+	processed_pseudogene	KNOWN	RP5-934G17.6	1	1	0.409732
chr1	11908152	11908271	11908211	ENSG00000199347.1	+	snRNA	KNOWN	RNU5E-1	1	1	0.890128
chr1	11909808	11909927	11909867	ENSG00000201801.1	-	snRNA	KNOWN	RNU5E-4P	1	1	0.890128
chr1	11919591	11926428	11923009	ENSG00000116685.15	-	protein_coding	KNOWN	KIAA2013	3	4	0.925238
chr1	11934205	11975538	11954871	ENSG00000083444.16	+	protein_coding	KNOWN	PLOD1	9	19	1.054636
chr1	11980181	12013514	11996847	ENSG00000116688.16	+	protein_coding	KNOWN	MFN2	6	19	0.742201
chr1	12017216	12017308	12017262	ENSG00000270914.1	-	processed_pseudogene	KNOWN	RP5-1077B9.5	1	1	0.761075
chr1	12019466	12032045	12025755	ENSG00000116691.10	+	protein_coding	KNOWN	MIIP	7	10	0.758658
chr1	12024012	12024124	12024068	ENSG00000202461.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.761075
chr1	12029158	12029222	12029190	ENSG00000276869.1	+	miRNA	KNOWN	MIR6729	1	1	0.761075
chr1	12036740	12037014	12036877	ENSG00000243539.3	-	misc_RNA	KNOWN	RN7SL649P	1	1	0.746217
chr1	12063377	12144207	12103792	ENSG00000120949.14	+	protein_coding	KNOWN	TNFRSF8	5	15	0.584464
chr1	12065002	12065246	12065124	ENSG00000281342.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.605004
chr1	12077881	12077984	12077932	ENSG00000201135.1	-	snRNA	KNOWN	RNU6-777P	1	1	0.508916
chr1	12080293	12080547	12080420	ENSG00000227875.2	-	processed_pseudogene	KNOWN	RPL23AP89	1	1	0.508916
chr1	12166943	12167038	12166990	ENSG00000275459.1	+	miRNA	KNOWN	MIR7846	1	1	0.635878
chr1	12167003	12209228	12188115	ENSG00000028137.16	+	protein_coding	KNOWN	TNFRSF1B	4	10	0.698336
chr1	12191713	12191773	12191743	ENSG00000263676.1	+	miRNA	KNOWN	MIR4632	1	1	0.797467
chr1	12220794	12221109	12220951	ENSG00000225196.2	-	processed_pseudogene	KNOWN	RP5-1118D24.2	1	1	0.993214
chr1	12221148	12221271	12221209	ENSG00000252969.1	-	snoRNA	NOVEL	SNORA70	1	1	0.993214
chr1	12230067	12512047	12371057	ENSG00000048707.13	+	protein_coding	KNOWN	VPS13D	14	70	0.325724
chr1	12481829	12481928	12481878	ENSG00000280999.1	+	miRNA	NOVEL	AC243836.1	1	1	0.639480
chr1	12507246	12507397	12507321	ENSG00000239149.1	+	snoRNA	KNOWN	SNORA59A	1	1	0.228257
chr1	12527724	12528420	12528072	ENSG00000229484.1	+	lincRNA	KNOWN	RP5-888M10.2	1	2	0.547074
chr1	12567910	12617731	12592820	ENSG00000162496.8	-	protein_coding	KNOWN	DHRS3	4	6	0.830826
chr1	12569972	12570072	12570022	ENSG00000221340.1	-	snRNA	KNOWN	RNU6ATAC18P	1	1	0.886820
chr1	12578957	12579023	12578990	ENSG00000276830.1	-	miRNA	KNOWN	MIR6730	1	1	0.825656
chr1	12618900	12619244	12619072	ENSG00000272482.1	-	lincRNA	KNOWN	RP11-474O21.5	1	1	0.863367
chr1	12644547	12667086	12655816	ENSG00000204518.2	+	protein_coding	KNOWN	AADACL4	1	4	0.414168
chr1	12692909	12693020	12692964	ENSG00000226166.2	+	processed_pseudogene	KNOWN	RP11-474O21.2	1	1	-0.079694
chr1	12716115	12728759	12722437	ENSG00000188984.11	+	protein_coding	KNOWN	AADACL3	2	4	-0.022829
chr1	12746215	12763699	12754957	ENSG00000157330.9	+	protein_coding	KNOWN	C1orf158	3	4	0.033103
chr1	12774841	12777906	12776373	ENSG00000116726.4	+	protein_coding	KNOWN	PRAMEF12	1	3	0.136846
chr1	12791397	12796628	12794012	ENSG00000116721.9	+	protein_coding	KNOWN	PRAMEF1	2	4	0.002010
chr1	12822686	12823159	12822922	ENSG00000228338.1	-	lincRNA	KNOWN	RP5-845O24.8	1	2	-0.029024
chr1	12824605	12831410	12828007	ENSG00000239810.3	-	protein_coding	KNOWN	PRAMEF11	1	4	-0.045148
chr1	12838125	12841357	12839741	ENSG00000231103.2	-	unprocessed_pseudogene	KNOWN	PRAMEF30P	1	4	-0.106788
chr1	12847377	12947578	12897477	ENSG00000179172.8	-	protein_coding	KNOWN	HNRNPCL1	2	2	0.051604
chr1	12857086	12861909	12859497	ENSG00000120952.4	+	protein_coding	KNOWN	PRAMEF2	1	4	0.059751
chr1	12879224	12886201	12882712	ENSG00000243073.3	-	protein_coding	KNOWN	PRAMEF4	1	4	0.160010
chr1	12892896	12898270	12895583	ENSG00000187545.5	-	protein_coding	KNOWN	PRAMEF10	1	4	-0.111336
chr1	12916610	12920482	12918546	ENSG00000204510.5	+	protein_coding	KNOWN	PRAMEF7	2	4	0.224299
chr1	12922554	12922660	12922607	ENSG00000207434.1	+	snRNA	KNOWN	RNU6-1072P	1	1	0.224299
chr1	12926162	12928253	12927207	ENSG00000234064.1	+	unprocessed_pseudogene	KNOWN	PRAMEF29P	1	2	0.224299
chr1	12938472	13056491	12997481	ENSG00000232423.5	-	protein_coding	KNOWN	PRAMEF6	3	4	-0.040042
chr1	13029339	13032130	13030734	ENSG00000274178.2	+	unprocessed_pseudogene	KNOWN	PRAMEF28	1	3	-0.189648
chr1	13049476	13158092	13103784	ENSG00000280267.3	-	protein_coding	KNOWN	PRAMEF26	2	5	0.027352
chr1	13049476	13056491	13052983	ENSG00000274764.5	-	protein_coding	KNOWN	PRAMEF27	1	4	0.211505
chr1	13060853	13077884	13069368	ENSG00000229571.6	+	protein_coding	KNOWN	PRAMEF25	3	4	0.051801
chr1	13060869	13062229	13061549	ENSG00000277058.2	+	protein_coding	KNOWN	HNRNPCL3	1	2	0.250849
chr1	13095179	13097971	13096575	ENSG00000277862.1	-	unprocessed_pseudogene	KNOWN	PRAMEF34P	1	3	0.294571
chr1	13104403	13105689	13105046	ENSG00000236179.1	-	unprocessed_pseudogene	KNOWN	PRAMEF35P	1	2	0.294571
chr1	13115496	13116854	13116175	ENSG00000275774.2	-	protein_coding	KNOWN	HNRNPCL2	1	2	-0.292868
chr1	13128818	13131615	13130216	ENSG00000229978.1	+	transcribed_unprocessed_pseudogene	KNOWN	PRAMEF36P	2	3	-0.105819
chr1	13146981	13147460	13147220	ENSG00000233336.1	-	lincRNA	KNOWN	RP13-221M14.2	1	2	0.030880
chr1	13164586	13165467	13165026	ENSG00000179412.10	-	protein_coding	KNOWN	HNRNPCL4	1	1	0.127096
chr1	13172455	13179464	13175959	ENSG00000204505.4	+	protein_coding	KNOWN	PRAMEF9	1	4	-0.155936
chr1	13196823	13199589	13198206	ENSG00000279169.1	-	unprocessed_pseudogene	KNOWN	PRAMEF13	1	3	-0.032763
chr1	13222695	13226133	13224414	ENSG00000279804.1	-	protein_coding	KNOWN	PRAMEF18	1	3	-0.011102
chr1	13245863	13248652	13247257	ENSG00000250894.1	+	unprocessed_pseudogene	KNOWN	PRAMEF31P	1	3	0.059570
chr1	13254212	13263314	13258763	ENSG00000270601.4	+	protein_coding	KNOWN	PRAMEF5	1	4	0.176384
chr1	13273539	13275627	13274583	ENSG00000231219.1	-	unprocessed_pseudogene	KNOWN	PRAMEF32P	1	2	0.180606
chr1	13279125	13279231	13279178	ENSG00000207511.1	-	snRNA	KNOWN	RNU6-771P	1	1	0.180606
chr1	13281035	13285174	13283104	ENSG00000182330.10	-	protein_coding	KNOWN	PRAMEF8	3	4	0.180606
chr1	13303509	13322598	13313053	ENSG00000204501.6	+	protein_coding	KNOWN	PRAMEF15	2	4	0.197638
chr1	13305955	13308887	13307421	ENSG00000237700.1	+	unitary_pseudogene	KNOWN	PRAMEF33P	1	3	0.032286
chr1	13324039	13324518	13324278	ENSG00000228229.2	+	lincRNA	KNOWN	RP11-219C24.10	1	2	0.282814
chr1	13342034	13347134	13344584	ENSG00000204481.7	-	protein_coding	KNOWN	PRAMEF14	2	4	0.084867
chr1	13369067	13371693	13370380	ENSG00000204480.7	-	protein_coding	KNOWN	PRAMEF19	1	3	0.053347
chr1	13389632	13392629	13391130	ENSG00000204479.4	+	protein_coding	KNOWN	PRAMEF17	1	3	0.069320
chr1	13410450	13421328	13415889	ENSG00000204478.9	+	protein_coding	KNOWN	PRAMEF20	2	4	0.047869
chr1	13474977	13514048	13494512	ENSG00000162494.5	-	protein_coding	KNOWN	LRRC38	1	2	0.085585
chr1	13513220	13516270	13514745	ENSG00000259961.1	+	antisense	KNOWN	RP4-597A16.2	1	3	0.515203
chr1	13555001	13555694	13555347	ENSG00000215909.3	+	processed_pseudogene	KNOWN	BRWD1P1	1	2	-0.271756
chr1	13583465	13617957	13600711	ENSG00000162493.16	+	protein_coding	KNOWN	PDPN	12	7	0.183717
chr1	13623184	13623284	13623234	ENSG00000222952.1	-	rRNA	KNOWN	RNA5SP41	1	1	-0.019040
chr1	13623902	13624002	13623952	ENSG00000266358.1	-	miRNA	NOVEL	AL359771.1	1	1	-0.019040
chr1	13657311	13659910	13658610	ENSG00000237445.2	-	lincRNA	KNOWN	CTA-520D8.2	1	2	-0.022829
chr1	13696070	13696199	13696134	ENSG00000253085.1	-	scaRNA	NOVEL	SCARNA11	1	1	-0.225978
chr1	13700198	13825079	13762638	ENSG00000116731.22	+	protein_coding	KNOWN	PRDM2	14	10	0.057356
chr1	14124233	14124335	14124284	ENSG00000252151.1	-	snRNA	KNOWN	RNU6-1265P	1	1	-0.040315
chr1	14221891	14223118	14222504	ENSG00000231606.1	-	lincRNA	KNOWN	RP11-344F13.1	1	2	-0.553165
chr1	14348955	14391575	14370265	ENSG00000234593.2	-	lincRNA	KNOWN	RP4-704D23.1	1	4	-0.078292
chr1	14598704	15118043	14858373	ENSG00000189337.15	+	protein_coding	KNOWN	KAZN	7	15	0.272316
chr1	14607334	14607436	14607385	ENSG00000280763.1	-	miRNA	NOVEL	AL034395.1	1	1	-0.043236
chr1	14692129	14692613	14692371	ENSG00000235829.1	-	processed_pseudogene	KNOWN	TBCAP2	1	2	0.100307
chr1	15111815	15152464	15132139	ENSG00000175147.11	-	antisense	KNOWN	TMEM51-AS1	2	6	0.396234
chr1	15152532	15220480	15186506	ENSG00000171729.13	+	protein_coding	KNOWN	TMEM51	6	4	0.492224
chr1	15164344	15171317	15167830	ENSG00000204464.7	-	lincRNA	KNOWN	C1orf195	2	2	0.699859
chr1	15191828	15192845	15192336	ENSG00000215720.4	-	processed_pseudogene	KNOWN	RP1-21O18.3	1	2	0.267079
chr1	15226373	15227549	15226961	ENSG00000278480.1	+	processed_pseudogene	KNOWN	RP5-903E17.2	1	2	0.334969
chr1	15247272	15400283	15323777	ENSG00000142621.19	+	protein_coding	KNOWN	FHAD1	22	31	0.377351
chr1	15326680	15343876	15335278	ENSG00000233485.1	-	antisense	KNOWN	RP3-467K16.2	1	2	0.395363
chr1	15334166	15335464	15334815	ENSG00000236045.1	-	antisense	KNOWN	RP3-467K16.7	1	2	0.389672
chr1	15402979	15409433	15406206	ENSG00000228140.1	-	lincRNA	KNOWN	RP3-467K16.4	1	3	0.589856
chr1	15409895	15430343	15420119	ENSG00000142634.12	+	protein_coding	KNOWN	EFHD2	2	5	0.565018
chr1	15438439	15449242	15443840	ENSG00000162438.11	+	protein_coding	KNOWN	CTRC	4	8	0.763369
chr1	15456728	15472091	15464409	ENSG00000142615.7	+	protein_coding	KNOWN	CELA2A	3	8	0.496499
chr1	15465909	15491400	15478654	ENSG00000215704.9	+	protein_coding	KNOWN	CELA2B	4	8	0.578871
chr1	15490832	15526534	15508683	ENSG00000132906.17	-	protein_coding	KNOWN	CASP9	11	9	0.424576
chr1	15526813	15592379	15559596	ENSG00000116138.12	+	protein_coding	KNOWN	DNAJC16	10	15	0.606460
chr1	15542165	15542304	15542234	ENSG00000251866.1	+	scaRNA	NOVEL	SCARNA21	1	1	0.427278
chr1	15565611	15565956	15565783	ENSG00000272510.1	-	antisense	KNOWN	RP4-680D5.8	1	1	0.622507
chr1	15572353	15585110	15578731	ENSG00000116771.5	-	protein_coding	KNOWN	AGMAT	1	7	0.807015
chr1	15586136	15603626	15594881	ENSG00000237301.1	-	antisense	KNOWN	RP4-680D5.2	1	2	0.641838
chr1	15604597	15605043	15604820	ENSG00000235084.3	+	processed_pseudogene	KNOWN	CHCHD2P6	1	1	0.595013
chr1	15608078	15608145	15608111	ENSG00000252417.1	-	snRNA	KNOWN	RNU7-179P	1	1	0.595013
chr1	15614643	15614867	15614755	ENSG00000236500.1	-	processed_pseudogene	KNOWN	RP4-680D5.4	1	1	0.655626
chr1	15617500	15669044	15643272	ENSG00000197312.11	+	protein_coding	KNOWN	DDI2	6	10	0.506049
chr1	15659869	15661722	15660795	ENSG00000215695.1	+	protein_coding	KNOWN	RSC1A1	1	1	0.408849
chr1	15682873	15683128	15683000	ENSG00000271742.1	-	lincRNA	KNOWN	RP4-680D5.9	1	1	0.351284
chr1	15684332	15734769	15709550	ENSG00000116786.11	+	protein_coding	KNOWN	PLEKHM2	4	20	0.741001
chr1	15684472	15684558	15684515	ENSG00000264048.1	+	miRNA	NOVEL	AL121992.1	1	1	0.351284
chr1	15720312	15736896	15728604	ENSG00000237938.5	-	antisense	KNOWN	RP11-288I21.1	3	4	1.015670
chr1	15736405	15741396	15738900	ENSG00000162461.7	+	protein_coding	KNOWN	SLC25A34	3	5	0.894052
chr1	15740051	15749896	15744973	ENSG00000224459.1	-	antisense	KNOWN	RP11-169K16.4	1	2	0.894052
chr1	15742422	15747982	15745202	ENSG00000162460.6	+	protein_coding	KNOWN	TMEM82	2	6	0.894052
chr1	15756607	15786594	15771600	ENSG00000162458.12	+	protein_coding	KNOWN	FBLIM1	15	10	0.949698
chr1	15763490	15763757	15763623	ENSG00000280788.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.015030
chr1	15792796	15793285	15793040	ENSG00000224321.1	+	processed_pseudogene	KNOWN	RPL12P14	1	1	1.087008
chr1	15807169	15809348	15808258	ENSG00000233954.6	-	protein_coding	KNOWN	UQCRHL	1	1	1.087008
chr1	15828232	15828669	15828450	ENSG00000178715.8	+	processed_pseudogene	KNOWN	RP11-169K16.8	1	1	0.554470
chr1	15834474	15848147	15841310	ENSG00000179743.4	-	antisense	KNOWN	FLJ37453	1	2	0.774963
chr1	15847864	15940460	15894162	ENSG00000065526.10	+	protein_coding	KNOWN	SPEN	5	15	0.549092
chr1	15917698	15917908	15917803	ENSG00000270620.1	-	unprocessed_pseudogene	KNOWN	RP1-134O19.3	1	1	0.431198
chr1	15941869	15976132	15959000	ENSG00000116809.11	-	protein_coding	KNOWN	ZBTB17	16	16	1.004219
chr1	15969632	15970194	15969913	ENSG00000234607.2	+	processed_pseudogene	KNOWN	RP11-5P18.1	1	1	1.042123
chr1	15988182	15988441	15988311	ENSG00000231353.1	+	unprocessed_pseudogene	KNOWN	RP11-5P18.3	1	1	0.851858
chr1	15989140	15989375	15989257	ENSG00000275503.1	-	processed_pseudogene	KNOWN	RP11-5P18.11	1	1	0.851858
chr1	15989871	15994751	15992311	ENSG00000224966.4	+	unprocessed_pseudogene	KNOWN	TBC1D3P6	1	8	0.866530
chr1	16004236	16008807	16006521	ENSG00000183888.4	+	protein_coding	KNOWN	C1orf64	1	2	0.866925
chr1	16006160	16006671	16006415	ENSG00000233078.1	-	antisense	KNOWN	RP11-5P18.5	1	2	0.866925
chr1	16014028	16019594	16016811	ENSG00000173641.17	-	protein_coding	KNOWN	HSPB7	7	4	1.030962
chr1	16018875	16034050	16026462	ENSG00000186510.11	+	protein_coding	KNOWN	CLCNKA	7	24	1.024532
chr1	16035178	16040029	16037603	ENSG00000232456.1	-	unprocessed_pseudogene	KNOWN	RP11-5P18.10	1	5	1.006875
chr1	16043736	16057308	16050522	ENSG00000184908.17	+	protein_coding	KNOWN	CLCNKB	4	20	1.022605
chr1	16057769	16073632	16065700	ENSG00000185519.8	-	protein_coding	KNOWN	FAM131C	2	7	1.036798
chr1	16124337	16156087	16140212	ENSG00000142627.12	-	protein_coding	KNOWN	EPHA2	4	17	1.313496
chr1	16155211	16157329	16156270	ENSG00000227959.1	+	antisense	KNOWN	RP11-276H7.2	1	2	1.231849
chr1	16159266	16161883	16160574	ENSG00000224621.1	+	antisense	KNOWN	RP11-276H7.3	1	2	1.231849
chr1	16197854	16198357	16198105	ENSG00000234166.1	+	antisense	KNOWN	ARHGEF19-AS1	1	2	0.838387
chr1	16197854	16212609	16205231	ENSG00000142632.16	-	protein_coding	KNOWN	ARHGEF19	6	16	0.830551
chr1	16215909	16228027	16221968	ENSG00000237276.8	-	transcribed_unprocessed_pseudogene	KNOWN	ANO7P1	3	17	0.794087
chr1	16231700	16237162	16234431	ENSG00000132881.11	-	protein_coding	KNOWN	RSG1	2	5	0.963137
chr1	16241213	16241398	16241305	ENSG00000233929.1	-	processed_pseudogene	KNOWN	MT1XP1	1	1	0.963137
chr1	16246839	16352454	16299646	ENSG00000037637.10	-	protein_coding	KNOWN	FBXO42	4	10	0.523577
chr1	16352575	16398145	16375360	ENSG00000055070.16	+	protein_coding	KNOWN	SZRD1	10	5	0.743346
chr1	16369150	16369530	16369340	ENSG00000226457.1	-	processed_pseudogene	KNOWN	RP11-430L17.1	1	1	0.565555
chr1	16387117	16437424	16412270	ENSG00000187144.11	-	protein_coding	KNOWN	SPATA21	6	17	0.716554
chr1	16408508	16408583	16408545	ENSG00000281598.1	+	miRNA	NOVEL	AL358794.1	1	1	0.594033
chr1	16440672	16460078	16450375	ENSG00000157191.19	+	protein_coding	KNOWN	NECAP2	12	9	0.831444
chr1	16460948	16468481	16464714	ENSG00000226029.1	+	lincRNA	KNOWN	RP4-798A10.2	1	2	0.885196
chr1	16467436	16499257	16483346	ENSG00000080947.14	-	transcribed_unprocessed_pseudogene	KNOWN	CROCCP3	6	15	0.801395
chr1	16514122	16514285	16514203	ENSG00000206652.1	-	snRNA	KNOWN	RNU1-1	1	1	0.505216
chr1	16514645	16515754	16515199	ENSG00000261135.1	+	lincRNA	KNOWN	RP4-798A10.7	1	1	0.505216
chr1	16520694	16521796	16521245	ENSG00000224174.2	+	lincRNA	KNOWN	RP4-798A10.4	1	2	0.505216
chr1	16533886	16536172	16535029	ENSG00000233421.4	-	lincRNA	KNOWN	RP5-875O13.1	2	2	0.638793
chr1	16534081	16534224	16534152	ENSG00000277344.1	-	snRNA	KNOWN	RNU1-6P	1	1	0.638793
chr1	16539066	16539575	16539320	ENSG00000268991.2	+	protein_coding	KNOWN	FAM231C	1	1	0.638793
chr1	16548651	16552531	16550591	ENSG00000225710.1	-	unprocessed_pseudogene	KNOWN	RP5-875O13.6	1	3	0.451828
chr1	16548914	16548987	16548950	ENSG00000266584.1	+	miRNA	NOVEL	AL355149.1	1	1	0.638793
chr1	16562319	16613562	16587940	ENSG00000219481.10	-	protein_coding	KNOWN	NBPF1	7	29	0.432837
chr1	16617391	16617729	16617560	ENSG00000271732.1	+	lincRNA	KNOWN	RP5-1182A14.5	1	1	0.458049
chr1	16618969	16644683	16631826	ENSG00000215908.8	-	transcribed_unprocessed_pseudogene	KNOWN	CROCCP2	3	10	0.648786
chr1	16645622	16650289	16647955	ENSG00000186301.8	+	unprocessed_pseudogene	KNOWN	MST1P2	1	18	0.783493
chr1	16656879	16667524	16662201	ENSG00000282143.1	+	lincRNA	KNOWN	RP1-163M9.8	1	3	0.654212
chr1	16666785	16666948	16666866	ENSG00000207513.1	-	snRNA	KNOWN	RNU1-3	1	1	0.654212
chr1	16673003	16673512	16673257	ENSG00000237847.2	+	protein_coding	KNOWN	FAM231A	1	1	0.447623
chr1	16681097	16688749	16684923	ENSG00000280114.1	-	unprocessed_pseudogene	KNOWN	RP5-875O13.7	1	5	0.447623
chr1	16681255	16681328	16681291	ENSG00000264742.1	+	miRNA	NOVEL	AL021920.1	1	1	0.447623
chr1	16685621	16686055	16685838	ENSG00000236698.1	-	processed_pseudogene	KNOWN	EIF1AXP1	1	1	0.447623
chr1	16687339	16720157	16703748	ENSG00000268869.5	-	transcribed_unprocessed_pseudogene	KNOWN	ESPNP	3	11	0.760580
chr1	16701546	16705594	16703570	ENSG00000279151.1	+	lincRNA	KNOWN	RP1-163M9.7	1	3	0.769318
chr1	16733951	16734461	16734206	ENSG00000279132.1	-	protein_coding	KNOWN	FAM231C	1	1	0.439414
chr1	16739938	16750589	16745263	ENSG00000282740.1	-	lincRNA	KNOWN	RP5-1182A14.7	1	3	0.448764
chr1	16740273	16972979	16856626	ENSG00000058453.16	+	protein_coding	KNOWN	CROCC	13	37	0.475774
chr1	16740280	16750968	16745624	ENSG00000227684.2	+	transcribed_unprocessed_pseudogene	KNOWN	CROCCP4	2	4	0.454716
chr1	16740516	16740679	16740597	ENSG00000207389.1	+	snRNA	KNOWN	RNU1-4	1	1	0.439414
chr1	16754910	16770237	16762573	ENSG00000186715.10	-	transcribed_unprocessed_pseudogene	KNOWN	MST1L	5	17	0.605492
chr1	16851257	16853129	16852193	ENSG00000223643.6	-	lincRNA	KNOWN	RP11-108M9.1	2	4	0.371215
chr1	16855407	16859284	16857345	ENSG00000230239.1	+	lincRNA	KNOWN	RP11-108M9.2	1	3	0.371215
chr1	16858949	16859021	16858985	ENSG00000263811.1	-	miRNA	KNOWN	MIR3675	1	1	0.371215
chr1	16870945	16874092	16872518	ENSG00000228549.3	+	lincRNA	KNOWN	RP11-108M9.3	5	2	0.428496
chr1	16873708	16873851	16873779	ENSG00000277234.1	+	snRNA	KNOWN	RNU1-5P	1	1	0.428496
chr1	16888538	16889649	16889093	ENSG00000238142.1	-	lincRNA	KNOWN	RP11-108M9.4	3	2	0.428496
chr1	16889095	16889602	16889348	ENSG00000235241.1	+	processed_pseudogene	KNOWN	RP11-108M9.5	1	1	0.428496
chr1	16895980	16896143	16896061	ENSG00000207005.1	+	snRNA	KNOWN	RNU1-2	1	1	0.693002
chr1	16904339	16904776	16904557	ENSG00000272426.1	-	lincRNA	KNOWN	RP11-108M9.6	1	1	0.693002
chr1	16974502	16980835	16977668	ENSG00000117122.13	-	protein_coding	KNOWN	MFAP2	6	9	0.986382
chr1	16978926	17005091	16992008	ENSG00000226526.1	+	antisense	KNOWN	RP1-37C10.3	1	2	1.140773
chr1	16985958	17011928	16998943	ENSG00000159363.17	-	protein_coding	KNOWN	ATP13A2	15	29	1.172403
chr1	17018722	17054170	17036446	ENSG00000117118.9	-	protein_coding	KNOWN	SDHB	8	8	0.587984
chr1	17066761	17119435	17093098	ENSG00000117115.12	-	protein_coding	KNOWN	PADI2	4	16	0.641666
chr1	17158197	17158284	17158240	ENSG00000281330.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.532958
chr1	17189783	17197617	17193700	ENSG00000204362.6	+	lincRNA	KNOWN	RP11-380J14.1	2	4	0.873423
chr1	17193232	17201733	17197482	ENSG00000282843.1	-	lincRNA	KNOWN	RP11-380J14.4	1	5	0.884631
chr1	17205126	17246005	17225565	ENSG00000142623.9	+	protein_coding	KNOWN	PADI1	3	16	0.909018
chr1	17249098	17284233	17266665	ENSG00000142619.4	+	protein_coding	KNOWN	PADI3	1	16	0.925701
chr1	17277889	17277975	17277932	ENSG00000266634.1	+	miRNA	KNOWN	MIR3972	1	1	0.766321
chr1	17308195	17364004	17336099	ENSG00000159339.13	+	protein_coding	KNOWN	PADI4	5	16	0.657090
chr1	17329012	17331796	17330404	ENSG00000280226.1	-	protein_coding	KNOWN	AC004824.2	1	2	0.503219
chr1	17372196	17401699	17386947	ENSG00000276747.1	+	protein_coding	KNOWN	PADI6	1	16	0.742903
chr1	17406760	17407382	17407071	ENSG00000227751.1	+	antisense	KNOWN	RP1-20B21.4	1	2	0.657392
chr1	17406760	17439724	17423242	ENSG00000179051.13	-	protein_coding	KNOWN	RCC2	3	13	0.746162
chr1	17413631	17413694	17413662	ENSG00000266727.1	-	miRNA	NOVEL	AC004824.1	1	1	0.778954
chr1	17539835	17697874	17618854	ENSG00000074964.16	+	protein_coding	KNOWN	ARHGEF10L	9	29	0.837089
chr1	17717687	17749978	17733832	ENSG00000236648.1	+	lincRNA	KNOWN	RP11-473A10.2	1	4	0.500308
chr1	17747169	17747222	17747195	ENSG00000278471.1	+	miRNA	NOVEL	AL136529.1	1	1	0.508859
chr1	17755313	17827063	17791188	ENSG00000117148.7	+	protein_coding	KNOWN	ACTL8	2	3	0.434095
chr1	18065657	18074412	18070034	ENSG00000261781.1	+	lincRNA	KNOWN	RP11-174G17.2	1	3	0.410062
chr1	18107746	18378483	18243114	ENSG00000117154.11	+	protein_coding	KNOWN	IGSF21	4	10	0.256057
chr1	18109389	18115861	18112625	ENSG00000280222.1	+	TEC	KNOWN	RP11-174G17.3	1	1	0.603226
chr1	18166929	18179346	18173137	ENSG00000230035.2	-	antisense	KNOWN	RP11-174G17	1	4	0.252120
chr1	18385829	18388514	18387171	ENSG00000225387.1	+	lincRNA	KNOWN	RP11-422P22.1	1	2	0.236382
chr1	18480982	18486126	18483554	ENSG00000179023.8	+	protein_coding	KNOWN	KLHDC7A	1	1	0.201221
chr1	18513118	18513383	18513250	ENSG00000235282.3	+	processed_pseudogene	KNOWN	DYNLL1P3	1	1	-0.221899
chr1	18595414	18595636	18595525	ENSG00000225478.2	+	processed_pseudogene	KNOWN	RP1-8B22.2	1	1	0.403700
chr1	18631006	18748866	18689936	ENSG00000009709.11	+	protein_coding	KNOWN	PAX7	3	9	0.436579
chr1	18839599	18859682	18849640	ENSG00000179002.5	-	protein_coding	KNOWN	TAS1R2	1	6	0.402244
chr1	18849273	18921121	18885197	ENSG00000255275.3	-	protein_coding	KNOWN	RP13-279N23.2	1	27	0.700714
chr1	18871430	18902781	18887105	ENSG00000159423.16	-	protein_coding	KNOWN	ALDH4A1	6	16	0.761762
chr1	18883202	18883275	18883238	ENSG00000265606.1	-	miRNA	KNOWN	MIR4695	1	1	0.668687
chr1	18897071	18897148	18897109	ENSG00000221662.1	-	miRNA	KNOWN	MIR1290	1	1	0.896976
chr1	18904281	18956686	18930483	ENSG00000169991.10	-	protein_coding	KNOWN	IFFO2	3	9	0.985979
chr1	19072110	19075511	19073810	ENSG00000272084.1	-	3prime_overlapping_ncrna	KNOWN	RP5-1126H10.2	1	1	1.121565
chr1	19074506	19210276	19142391	ENSG00000127481.14	-	protein_coding	KNOWN	UBR4	17	106	0.748258
chr1	19210501	19240704	19225602	ENSG00000230424.1	+	antisense	KNOWN	RP1-43E13.2	1	2	0.751253
chr1	19215664	19251552	19233608	ENSG00000127463.13	-	protein_coding	KNOWN	EMC1	14	23	0.814062
chr1	19251539	19260128	19255833	ENSG00000053372.4	+	protein_coding	KNOWN	MRTO4	3	8	0.571314
chr1	19265982	19274194	19270088	ENSG00000211454.13	-	polymorphic_pseudogene	KNOWN	AKR7L	4	8	0.580051
chr1	19282558	19289250	19285904	ENSG00000162482.4	-	protein_coding	KNOWN	AKR7A3	1	7	0.588418
chr1	19297080	19297903	19297491	ENSG00000270728.1	+	processed_pseudogene	KNOWN	RP4-657E11.10	1	2	0.430040
chr1	19303965	19312146	19308055	ENSG00000053371.12	-	protein_coding	KNOWN	AKR7A2	5	7	0.503660
chr1	19305076	19305182	19305129	ENSG00000200403.1	-	snRNA	KNOWN	RNU6-1099P	1	1	0.430040
chr1	19312326	19329300	19320813	ENSG00000040487.12	+	protein_coding	KNOWN	PQLC2	6	9	0.710563
chr1	19338776	19485539	19412157	ENSG00000077549.17	-	protein_coding	KNOWN	CAPZB	9	10	0.713873
chr1	19424384	19424671	19424527	ENSG00000240490.3	+	misc_RNA	KNOWN	RN7SL277P	1	1	0.570039
chr1	19510593	19510733	19510663	ENSG00000201609.1	+	snRNA	KNOWN	RNU4-28P	1	1	0.604104
chr1	19591802	19596832	19594317	ENSG00000235185.1	-	antisense	KNOWN	RP5-1056L3.1	1	2	0.477645
chr1	19596977	19629821	19613399	ENSG00000173436.13	+	protein_coding	KNOWN	MINOS1	10	5	0.358817
chr1	19596979	19658056	19627517	ENSG00000270136.5	+	protein_coding	KNOWN	MINOS1-NBL1	4	10	0.527460
chr1	19608114	19608568	19608341	ENSG00000226396.1	+	processed_pseudogene	KNOWN	RP5-1056L3.3	1	1	0.477645
chr1	19640554	19658456	19649505	ENSG00000158747.13	+	protein_coding	KNOWN	NBL1	13	4	0.796505
chr1	19665287	19679562	19672424	ENSG00000158748.3	+	protein_coding	KNOWN	HTR6	1	3	0.924514
chr1	19682213	19799945	19741079	ENSG00000162542.13	-	protein_coding	KNOWN	TMCO4	8	16	0.694465
chr1	19814029	19815278	19814653	ENSG00000178828.6	-	protein_coding	KNOWN	RNF186	1	1	0.650154
chr1	19814367	19819502	19816934	ENSG00000235434.1	+	antisense	KNOWN	RP11-91K11.2	1	2	0.650154
chr1	19882513	19912945	19897729	ENSG00000169914.5	+	protein_coding	KNOWN	OTUD3	3	8	0.351741
chr1	19920009	19923617	19921813	ENSG00000188784.4	-	protein_coding	KNOWN	PLA2G2E	1	4	0.219606
chr1	19970969	19971269	19971119	ENSG00000242688.3	+	misc_RNA	KNOWN	RN7SL304P	1	1	0.356234
chr1	19975431	19980416	19977923	ENSG00000188257.10	-	protein_coding	KNOWN	PLA2G2A	7	6	0.356234
chr1	20028179	20091190	20059684	ENSG00000127472.10	+	protein_coding	KNOWN	PLA2G5	8	10	-0.077350
chr1	20111939	20119566	20115752	ENSG00000117215.14	-	protein_coding	KNOWN	PLA2G2D	2	4	0.457276
chr1	20139326	20150386	20144856	ENSG00000158786.4	+	protein_coding	KNOWN	PLA2G2F	2	5	0.197268
chr1	20154338	20160568	20157453	ENSG00000227066.1	+	lincRNA	KNOWN	RP3-340N1.2	2	2	0.560141
chr1	20161253	20177424	20169338	ENSG00000187980.6	-	protein_coding	KNOWN	PLA2G2C	3	4	0.440689
chr1	20184242	20186486	20185364	ENSG00000225986.1	-	antisense	KNOWN	UBXN10-AS1	1	2	0.299985
chr1	20186085	20196048	20191066	ENSG00000162543.5	+	protein_coding	KNOWN	UBXN10	1	2	0.109805
chr1	20243095	20244655	20243875	ENSG00000228105.1	+	lincRNA	KNOWN	RP3-340N1.6	1	2	0.206894
chr1	20290919	20354894	20322906	ENSG00000158816.15	+	protein_coding	KNOWN	VWA5B1	8	22	0.383318
chr1	20294211	20323187	20308699	ENSG00000226664.1	-	antisense	KNOWN	RP4-745E8.2	1	2	0.384874
chr1	20360579	20431234	20395906	ENSG00000236963.6	-	lincRNA	KNOWN	LINC01141	5	12	0.619614
chr1	20412304	20413253	20412778	ENSG00000226487.1	-	lincRNA	KNOWN	RP4-749H3.2	1	3	0.819739
chr1	20482391	20486220	20484305	ENSG00000162545.5	-	protein_coding	KNOWN	CAMK2N1	2	2	0.416891
chr1	20499448	20508161	20503804	ENSG00000090432.6	-	protein_coding	KNOWN	MUL1	1	4	0.789963
chr1	20525989	20526751	20526370	ENSG00000215520.3	+	processed_pseudogene	KNOWN	RPS4XP4	1	1	0.547671
chr1	20552439	20555010	20553724	ENSG00000183114.7	+	protein_coding	KNOWN	FAM43B	1	1	0.643718
chr1	20588948	20618908	20603928	ENSG00000158825.5	+	protein_coding	KNOWN	CDA	2	4	0.836748
chr1	20633455	20651511	20642483	ENSG00000158828.5	+	protein_coding	KNOWN	PINK1	3	8	0.679595
chr1	20633679	20633788	20633733	ENSG00000273695.1	+	miRNA	KNOWN	MIR6084	1	1	0.662484
chr1	20642657	20652193	20647425	ENSG00000117242.7	-	antisense	KNOWN	PINK1-AS	1	3	0.709496
chr1	20651767	20661544	20656655	ENSG00000244038.9	-	protein_coding	KNOWN	DDOST	6	11	0.866817
chr1	20664014	20718017	20691015	ENSG00000117245.12	-	protein_coding	KNOWN	KIF17	9	15	0.930648
chr1	20692734	20694013	20693373	ENSG00000235432.1	-	unprocessed_pseudogene	KNOWN	RP5-930J4.5	1	4	1.003936
chr1	20719732	20732837	20726284	ENSG00000189410.11	-	protein_coding	KNOWN	SH2D5	7	10	0.863004
chr1	20732880	20733952	20733416	ENSG00000233069.1	+	antisense	KNOWN	RP5-930J4.2	1	2	0.750203
chr1	20742661	20787323	20764992	ENSG00000127483.17	-	protein_coding	KNOWN	HP1BP3	14	13	0.468367
chr1	20806292	21176888	20991590	ENSG00000075151.20	-	protein_coding	KNOWN	EIF4G3	14	35	0.279162
chr1	20841241	20841302	20841271	ENSG00000251914.1	+	snRNA	KNOWN	RNU7-200P	1	1	0.465145
chr1	20988314	20988432	20988373	ENSG00000221808.1	-	miRNA	KNOWN	MIR1256	1	1	0.159455
chr1	21003550	21003934	21003742	ENSG00000233072.1	-	processed_pseudogene	KNOWN	RPS15AP6	1	1	0.177383
chr1	21073639	21073753	21073696	ENSG00000236073.2	-	processed_pseudogene	KNOWN	RP11-487E1.2	1	1	0.282422
chr1	21161475	21162081	21161778	ENSG00000235112.1	+	processed_pseudogene	KNOWN	HSPE1P27	1	2	0.294932
chr1	21217247	21345504	21281375	ENSG00000117298.14	-	protein_coding	KNOWN	ECE1	13	19	0.868053
chr1	21266082	21267251	21266666	ENSG00000236936.1	+	antisense	KNOWN	RP3-329E20.2	1	3	0.631574
chr1	21293290	21299774	21296532	ENSG00000231105.1	+	antisense	KNOWN	RP5-1071N3.1	1	3	0.718623
chr1	21397987	21398362	21398174	ENSG00000236216.5	+	processed_pseudogene	KNOWN	PPP1R11P1	1	1	0.461477
chr1	21411460	21413293	21412376	ENSG00000228823.1	-	unprocessed_pseudogene	KNOWN	RP11-293F5.8	1	2	0.634409
chr1	21415898	21417492	21416695	ENSG00000236009.1	+	lincRNA	KNOWN	RP11-293F5.1	2	3	0.634409
chr1	21424625	21427967	21426296	ENSG00000227001.3	-	unprocessed_pseudogene	KNOWN	NBPF2P	1	5	0.634409
chr1	21428303	21429536	21428919	ENSG00000187952.9	+	processed_pseudogene	KNOWN	HS6ST1P1	1	1	0.634409
chr1	21434318	21437558	21435938	ENSG00000186543.7	+	unprocessed_pseudogene	KNOWN	CROCCP5	1	5	0.541675
chr1	21440128	21485005	21462566	ENSG00000142794.18	+	protein_coding	KNOWN	NBPF3	13	19	0.610352
chr1	21459756	21460082	21459919	ENSG00000176378.8	-	processed_pseudogene	KNOWN	PFN1P10	1	1	0.686353
chr1	21509372	21578412	21543892	ENSG00000162551.13	+	protein_coding	KNOWN	ALPL	7	12	0.766247
chr1	21586472	21591187	21588829	ENSG00000233431.1	+	antisense	KNOWN	RP11-63N8.3	1	2	0.914320
chr1	21592411	21592548	21592479	ENSG00000221781.1	-	miRNA	NOVEL	AL359815.1	1	1	1.050887
chr1	21596215	21669363	21632789	ENSG00000076864.19	-	protein_coding	KNOWN	RAP1GAP	13	27	0.921590
chr1	21678298	21783606	21730952	ENSG00000090686.15	-	protein_coding	KNOWN	USP48	15	27	0.711901
chr1	21741140	21741195	21741167	ENSG00000281866.1	+	snRNA	NOVEL	U7	1	1	0.702340
chr1	21768269	21768575	21768422	ENSG00000231978.2	+	processed_pseudogene	KNOWN	RP11-132G19.3	1	1	0.666107
chr1	21812265	21825221	21818743	ENSG00000187942.11	+	protein_coding	KNOWN	LDLRAD2	3	6	1.223044
chr1	21822245	21937297	21879771	ENSG00000142798.17	-	protein_coding	KNOWN	HSPG2	14	97	1.386458
chr1	21908098	21908580	21908339	ENSG00000232037.3	+	processed_pseudogene	KNOWN	RP11-26H16.1	1	1	1.434880
chr1	21977021	21998642	21987831	ENSG00000219073.7	+	protein_coding	KNOWN	CELA3B	4	8	1.117049
chr1	21987481	21987777	21987629	ENSG00000273610.1	+	misc_RNA	KNOWN	RN7SL386P	1	1	1.148405
chr1	21987816	21987919	21987867	ENSG00000201919.1	+	snRNA	KNOWN	RNU6-1022P	1	1	1.148405
chr1	22001656	22012539	22007097	ENSG00000142789.19	+	protein_coding	KNOWN	CELA3A	3	8	1.112193
chr1	22010650	22010946	22010798	ENSG00000278124.1	+	misc_RNA	KNOWN	RN7SL186P	1	1	1.250895
chr1	22010985	22011088	22011036	ENSG00000201273.1	+	snRNA	KNOWN	RNU6-776P	1	1	1.250895
chr1	22023990	22026048	22025019	ENSG00000228397.2	-	lincRNA	KNOWN	RP1-224A6.3	2	3	1.250895
chr1	22024531	22031225	22027878	ENSG00000218510.6	+	lincRNA	KNOWN	LINC00339	10	3	1.166226
chr1	22052627	22092946	22072786	ENSG00000070831.15	+	protein_coding	KNOWN	CDC42	5	7	0.791180
chr1	22059197	22064199	22061698	ENSG00000230068.2	+	sense_intronic	KNOWN	CDC42-IT1	1	2	0.734009
chr1	22068340	22068827	22068583	ENSG00000271428.1	-	processed_pseudogene	KNOWN	RP1-224A6.8	1	1	0.734009
chr1	22100613	22101360	22100986	ENSG00000271840.1	+	lincRNA	KNOWN	RP1-224A6.9	1	1	0.345997
chr1	22117305	22143969	22130637	ENSG00000162552.14	-	protein_coding	KNOWN	WNT4	3	5	0.928264
chr1	22266239	22266300	22266269	ENSG00000266564.1	+	miRNA	KNOWN	MIR4418	1	1	0.924597
chr1	22322840	22323331	22323085	ENSG00000234397.3	-	processed_pseudogene	KNOWN	RP11-415K20.1	1	1	0.413920
chr1	22364630	22366482	22365556	ENSG00000279625.1	-	TEC	KNOWN	RP11-415K20.2	1	1	0.679580
chr1	22451851	22531157	22491504	ENSG00000184677.16	+	protein_coding	KNOWN	ZBTB40	4	19	0.324047
chr1	22517474	22519708	22518591	ENSG00000237200.1	+	sense_intronic	KNOWN	ZBTB40-IT1	1	2	0.507029
chr1	22563564	22603594	22583579	ENSG00000070886.10	+	protein_coding	KNOWN	EPHA8	3	17	0.759659
chr1	22633308	22633416	22633362	ENSG00000276835.1	-	miRNA	NOVEL	AL158086.1	1	1	0.763938
chr1	22636506	22639608	22638057	ENSG00000173372.16	+	protein_coding	KNOWN	C1QA	3	3	0.763938
chr1	22643630	22648110	22645870	ENSG00000159189.11	+	protein_coding	KNOWN	C1QC	3	3	0.763938
chr1	22652762	22661538	22657150	ENSG00000173369.15	+	protein_coding	KNOWN	C1QB	4	4	0.818174
chr1	22710839	22921500	22816169	ENSG00000133216.16	+	protein_coding	KNOWN	EPHB2	7	17	0.714208
chr1	22719517	22719598	22719557	ENSG00000265422.1	+	miRNA	KNOWN	MIR4684	1	1	0.709658
chr1	22748817	22748911	22748864	ENSG00000216157.2	-	miRNA	NOVEL	AL611946.1	1	1	0.718623
chr1	22835713	22836849	22836281	ENSG00000225952.1	-	antisense	KNOWN	RP11-69E9.1	1	2	0.602954
chr1	22863159	22863226	22863192	ENSG00000264014.1	-	miRNA	KNOWN	MIR4253	1	1	0.757573
chr1	22953043	22965338	22959190	ENSG00000215906.8	-	protein_coding	KNOWN	LACTBL1	2	6	0.434384
chr1	23010834	23015850	23013342	ENSG00000227868.5	-	protein_coding	KNOWN	C1orf234	3	3	0.477423
chr1	23019448	23083689	23051568	ENSG00000004487.15	+	protein_coding	KNOWN	KDM1A	6	21	0.230905
chr1	23020147	23088058	23054102	ENSG00000240553.1	-	antisense	KNOWN	RP1-184J9.2	1	2	0.227542
chr1	23044305	23044372	23044338	ENSG00000263793.1	+	miRNA	KNOWN	MIR3115	1	1	0.147948
chr1	23057858	23057934	23057896	ENSG00000266802.1	-	miRNA	KNOWN	MIR4419A	1	1	0.192596
chr1	23084023	23177808	23130915	ENSG00000169641.13	-	protein_coding	KNOWN	LUZP1	5	5	0.505456
chr1	23140325	23141142	23140733	ENSG00000229010.1	+	processed_pseudogene	KNOWN	RP5-979D14.1	1	1	0.574774
chr1	23162704	23162810	23162757	ENSG00000206935.1	+	snRNA	KNOWN	RNU6-514P	1	1	0.511217
chr1	23163953	23164053	23164003	ENSG00000252578.1	+	snRNA	KNOWN	RNU6-135P	1	1	0.511217
chr1	23191895	23194729	23193312	ENSG00000179546.4	-	protein_coding	KNOWN	HTR1D	1	1	0.744826
chr1	23244765	23245224	23244994	ENSG00000215381.3	+	processed_pseudogene	KNOWN	RP5-1057J7.1	1	1	0.623183
chr1	23281309	23286752	23284030	ENSG00000261326.2	-	lincRNA	KNOWN	LINC01355	2	2	0.666538
chr1	23303771	23344336	23324053	ENSG00000125944.18	-	protein_coding	KNOWN	HNRNPR	12	11	0.443254
chr1	23359448	23369442	23364445	ENSG00000125945.14	-	protein_coding	KNOWN	ZNF436	2	4	0.676954
chr1	23368997	23371839	23370418	ENSG00000249087.6	+	antisense	KNOWN	ZNF436-AS1	6	3	0.730342
chr1	23370254	23370346	23370300	ENSG00000201405.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.759416
chr1	23378380	23379029	23378704	ENSG00000271420.1	-	lincRNA	KNOWN	RP5-1057J7.7	1	1	0.759416
chr1	23381061	23424740	23402900	ENSG00000204219.9	-	protein_coding	KNOWN	TCEA3	6	11	0.829140
chr1	23410832	23412146	23411489	ENSG00000232482.2	+	processed_pseudogene	KNOWN	RP4-654C18.1	1	3	0.808199
chr1	23428563	23484568	23456565	ENSG00000088280.18	-	protein_coding	KNOWN	ASAP3	12	25	0.876581
chr1	23506430	23531220	23518825	ENSG00000007968.6	-	protein_coding	KNOWN	E2F2	2	7	0.980965
chr1	23538035	23538313	23538174	ENSG00000280791.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.067245
chr1	23549139	23550915	23550027	ENSG00000235052.1	-	lincRNA	KNOWN	RP1-150O5.3	1	2	1.130397
chr1	23557918	23559794	23558856	ENSG00000117318.8	-	protein_coding	KNOWN	ID3	3	3	1.189688
chr1	23581495	23640568	23611031	ENSG00000197880.8	+	protein_coding	KNOWN	MDS2	3	7	0.892336
chr1	23670294	23680259	23675276	ENSG00000229239.2	+	unprocessed_pseudogene	KNOWN	RP11-223J15.2	1	7	0.479015
chr1	23691779	23696425	23694102	ENSG00000142676.12	+	protein_coding	KNOWN	RPL11	5	6	0.524951
chr1	23743155	23762059	23752607	ENSG00000011007.12	+	protein_coding	KNOWN	TCEB3	4	11	0.780669
chr1	23760382	23778287	23769334	ENSG00000236810.5	-	antisense	KNOWN	TCEB3-AS1	2	4	0.733110
chr1	23778405	23788232	23783318	ENSG00000057757.9	+	protein_coding	KNOWN	PITHD1	3	6	0.719479
chr1	23790970	23795539	23793254	ENSG00000011009.10	+	protein_coding	KNOWN	LYPLA2	10	10	1.000651
chr1	23795599	23800804	23798201	ENSG00000117308.14	-	protein_coding	KNOWN	GALE	16	12	1.000651
chr1	23801885	23838620	23820252	ENSG00000117305.14	-	protein_coding	KNOWN	HMGCL	9	10	0.832550
chr1	23845077	23868294	23856685	ENSG00000179163.11	-	protein_coding	KNOWN	FUCA1	1	8	0.191073
chr1	23870526	23913362	23891944	ENSG00000188822.7	-	protein_coding	KNOWN	CNR2	1	2	0.657807
chr1	23901471	23902737	23902104	ENSG00000229106.1	-	processed_pseudogene	KNOWN	BTBD6P1	1	1	0.489647
chr1	23907111	23907885	23907498	ENSG00000232557.3	+	antisense	KNOWN	RP11-4M23.3	1	2	0.489647
chr1	23929070	23929147	23929108	ENSG00000264926.1	+	miRNA	KNOWN	MIR378F	1	1	0.732618
chr1	23949016	23949383	23949199	ENSG00000230228.2	-	processed_pseudogene	KNOWN	RP11-4M23.4	1	1	0.697213
chr1	23959109	23963462	23961285	ENSG00000189266.11	+	protein_coding	KNOWN	PNRC2	4	3	0.571682
chr1	23964804	23980927	23972865	ENSG00000188529.14	-	protein_coding	KNOWN	SRSF10	16	7	0.269698
chr1	24007881	24008519	24008200	ENSG00000215905.4	-	processed_pseudogene	KNOWN	RP11-4M23.7	1	2	0.654783
chr1	24040835	24086799	24063817	ENSG00000225315.2	+	antisense	KNOWN	RP11-293P20.2	1	4	0.628450
chr1	24056035	24112175	24084105	ENSG00000142661.18	-	protein_coding	KNOWN	MYOM3	4	37	0.588647
chr1	24066774	24083565	24075169	ENSG00000230703.1	+	antisense	KNOWN	RP11-293P20.4	1	3	0.549467
chr1	24119771	24143121	24131446	ENSG00000142677.3	-	protein_coding	KNOWN	IL22RA1	1	7	0.666477
chr1	24154157	24187959	24171058	ENSG00000185436.11	-	protein_coding	KNOWN	IFNLR1	5	7	0.349743
chr1	24200240	24211693	24205966	ENSG00000230023.2	+	lincRNA	KNOWN	RP11-10N16.2	1	3	0.687872
chr1	24227917	24228030	24227973	ENSG00000221032.3	+	miRNA	NOVEL	AL590683.1	1	1	0.474849
chr1	24279767	24279855	24279811	ENSG00000266511.1	-	miRNA	NOVEL	AL590683.2	1	1	0.352583
chr1	24307556	24321901	24314728	ENSG00000232298.2	-	antisense	KNOWN	RP11-10N16.3	1	5	0.668180
chr1	24319322	24364482	24341902	ENSG00000158055.15	+	protein_coding	KNOWN	GRHL3	9	16	0.614062
chr1	24356999	24416934	24386966	ENSG00000001460.17	-	protein_coding	KNOWN	STPG1	12	10	0.537479
chr1	24415794	24472976	24444385	ENSG00000001461.16	+	protein_coding	KNOWN	NIPAL3	7	13	0.465608
chr1	24502351	24541040	24521695	ENSG00000117602.11	+	protein_coding	KNOWN	RCAN3	11	5	0.310035
chr1	24538802	24556024	24547413	ENSG00000264443.1	-	lincRNA	KNOWN	RP4-594I10.3	1	3	0.413242
chr1	24556111	24609328	24582719	ENSG00000184454.6	+	protein_coding	KNOWN	NCMAP	2	4	0.591358
chr1	24563627	24563974	24563800	ENSG00000227312.2	+	processed_pseudogene	KNOWN	RP11-496D1.2	1	1	0.500457
chr1	24625411	24625513	24625462	ENSG00000239106.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.194803
chr1	24631716	24673267	24652491	ENSG00000133226.16	+	protein_coding	KNOWN	SRRM1	23	19	0.392518
chr1	24745357	24844324	24794840	ENSG00000169504.14	+	protein_coding	KNOWN	CLIC4	4	7	0.349509
chr1	24777873	24777979	24777926	ENSG00000238482.1	-	snRNA	KNOWN	RNU6-1208P	1	1	0.441326
chr1	24899511	24965121	24932316	ENSG00000020633.18	-	protein_coding	KNOWN	RUNX3	5	7	0.774547
chr1	24919345	24919416	24919380	ENSG00000278034.1	-	miRNA	KNOWN	MIR6731	1	1	0.977614
chr1	24961345	24963097	24962221	ENSG00000229162.1	+	antisense	KNOWN	RP11-84D1.1	1	3	0.776687
chr1	24968423	24970865	24969644	ENSG00000261025.1	-	lincRNA	KNOWN	RP11-84D1.2	1	1	0.691190
chr1	25023503	25023586	25023544	ENSG00000264371.1	+	miRNA	KNOWN	MIR4425	1	1	0.513028
chr1	25043707	25113120	25078413	ENSG00000233755.1	-	lincRNA	KNOWN	RP4-799D16.1	2	3	0.586532
chr1	25125053	25125454	25125253	ENSG00000233419.3	-	processed_pseudogene	KNOWN	RP4-781L3.1	1	1	0.212846
chr1	25208139	25209437	25208788	ENSG00000231953.2	+	antisense	KNOWN	RP4-706G24.1	1	2	0.528856
chr1	25222679	25232502	25227590	ENSG00000117614.9	-	protein_coding	KNOWN	SYF2	4	7	0.284668
chr1	25242237	25338213	25290225	ENSG00000117616.17	-	protein_coding	KNOWN	RSRP1	22	6	0.680007
chr1	25247837	25248321	25248079	ENSG00000272432.1	+	lincRNA	KNOWN	RP3-465N24.6	1	1	0.540044
chr1	25266102	25267136	25266619	ENSG00000261349.1	-	unprocessed_pseudogene	KNOWN	RP3-465N24.5	1	2	0.779109
chr1	25272393	25330445	25301419	ENSG00000187010.18	+	protein_coding	KNOWN	RHD	11	11	0.683053
chr1	25294164	25294643	25294403	ENSG00000224183.1	-	processed_pseudogene	KNOWN	SDHDP6	1	1	0.763369
chr1	25336429	25337465	25336947	ENSG00000259984.1	-	unprocessed_pseudogene	KNOWN	RP11-335G20.7	1	2	0.519985
chr1	25337917	25362361	25350139	ENSG00000183726.10	+	protein_coding	KNOWN	TMEM50A	6	7	0.471477
chr1	25362249	25430192	25396220	ENSG00000188672.16	-	protein_coding	KNOWN	RHCE	12	12	0.479832
chr1	25398721	25399198	25398959	ENSG00000238084.4	+	processed_pseudogene	KNOWN	RP3-469D22.1	1	1	0.530876
chr1	25430858	25500209	25465533	ENSG00000204178.9	+	protein_coding	KNOWN	TMEM57	3	11	0.323091
chr1	25543580	25568886	25556233	ENSG00000157978.11	+	protein_coding	KNOWN	LDLRAP1	7	9	0.913113
chr1	25581478	25590356	25585917	ENSG00000225643.1	+	lincRNA	KNOWN	RP11-70P17.1	1	2	0.742698
chr1	25617468	25786207	25701837	ENSG00000117643.14	+	protein_coding	KNOWN	MAN1C1	8	14	0.572849
chr1	25644544	25659111	25651827	ENSG00000233478.1	-	antisense	KNOWN	RP1-187B23.1	1	2	0.309741
chr1	25800176	25818224	25809200	ENSG00000162430.16	+	protein_coding	KNOWN	SEPN1	5	13	0.849480
chr1	25811470	25823744	25817607	ENSG00000255054.3	+	protein_coding	KNOWN	RP1-317E23.6	2	4	1.019388
chr1	25816749	25820797	25818773	ENSG00000228172.5	-	antisense	KNOWN	RP1-317E23.3	3	4	1.019388
chr1	25818640	25832942	25825791	ENSG00000117640.17	+	protein_coding	KNOWN	MTFR1L	23	7	0.910782
chr1	25831913	25859458	25845685	ENSG00000127423.10	-	protein_coding	KNOWN	AUNIP	3	4	0.508588
chr1	25831913	25832134	25832023	ENSG00000272478.1	-	antisense	KNOWN	RP1-317E23.7	1	1	0.491599
chr1	25859613	25863420	25861516	ENSG00000236528.1	+	antisense	KNOWN	RP1-125I3.2	1	2	0.541071
chr1	25861210	25871253	25866231	ENSG00000182749.5	-	protein_coding	KNOWN	PAQR7	1	2	0.570910
chr1	25877496	25877605	25877550	ENSG00000207302.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.780048
chr1	25884181	25906991	25895586	ENSG00000117632.20	-	protein_coding	KNOWN	STMN1	9	5	0.763984
chr1	25887360	25887610	25887485	ENSG00000229786.1	+	processed_pseudogene	KNOWN	SNRPFP2	1	1	0.780048
chr1	25888970	25889109	25889039	ENSG00000223624.1	+	processed_pseudogene	KNOWN	RP1-125I3.4	1	1	0.780048
chr1	25906362	25906454	25906408	ENSG00000264021.1	-	miRNA	KNOWN	MIR3917	1	1	0.758484
chr1	25911749	25911822	25911785	ENSG00000266763.1	+	miRNA	NOVEL	AL033528.1	1	1	0.700509
chr1	25959767	25998157	25978962	ENSG00000158006.13	-	protein_coding	KNOWN	PAFAH2	7	11	0.606199
chr1	25964197	25964300	25964248	ENSG00000207237.1	+	snRNA	KNOWN	RNU6-110P	1	1	0.633562
chr1	26006006	26006130	26006068	ENSG00000252190.1	+	scaRNA	NOVEL	SCARNA17	1	1	0.469297
chr1	26006216	26006299	26006257	ENSG00000252691.1	+	scaRNA	NOVEL	SCARNA18	1	1	0.469297
chr1	26019884	26036464	26028174	ENSG00000158008.9	+	protein_coding	KNOWN	EXTL1	4	11	0.849964
chr1	26037252	26046133	26041692	ENSG00000158014.14	-	protein_coding	KNOWN	SLC30A2	3	8	1.087767
chr1	26051304	26068436	26059870	ENSG00000158022.6	-	protein_coding	KNOWN	TRIM63	2	9	0.601853
chr1	26071578	26071677	26071627	ENSG00000265320.1	+	miRNA	NOVEL	AL391650.1	1	1	0.811575
chr1	26111165	26125543	26118354	ENSG00000175087.9	+	protein_coding	KNOWN	PDIK1L	4	4	0.380048
chr1	26159020	26163962	26161491	ENSG00000197245.5	+	protein_coding	KNOWN	FAM110D	1	2	0.766896
chr1	26164161	26168581	26166371	ENSG00000282872.1	-	protein_coding	KNOWN	RP11-96L14.8	2	4	0.766896
chr1	26169516	26171821	26170668	ENSG00000236782.6	-	protein_coding	KNOWN	RP11-96L14.7	5	4	0.815952
chr1	26169871	26172060	26170965	ENSG00000142684.7	+	protein_coding	KNOWN	ZNF593	2	3	0.825328
chr1	26177403	26189886	26183644	ENSG00000142675.17	+	protein_coding	KNOWN	CNKSR1	14	21	0.828957
chr1	26190561	26202968	26196764	ENSG00000188782.7	+	protein_coding	KNOWN	CATSPER4	4	11	1.028940
chr1	26209741	26229840	26219790	ENSG00000236155.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-231P20.2	4	8	0.415609
chr1	26218581	26220476	26219528	ENSG00000278572.1	-	unprocessed_pseudogene	KNOWN	RP11-231P20.6	1	3	0.407634
chr1	26234153	26279038	26256595	ENSG00000130695.13	+	protein_coding	KNOWN	CEP85	8	15	0.596808
chr1	26263041	26263398	26263219	ENSG00000270733.1	-	processed_pseudogene	KNOWN	RP11-231P20.5	1	1	0.690251
chr1	26279176	26281522	26280349	ENSG00000142669.13	+	protein_coding	KNOWN	SH3BGRL3	3	4	0.483946
chr1	26281328	26318363	26299845	ENSG00000158062.20	-	protein_coding	KNOWN	UBXN11	16	16	0.818131
chr1	26317957	26320523	26319240	ENSG00000169442.8	+	protein_coding	KNOWN	CD52	3	3	0.685672
chr1	26321859	26354130	26337994	ENSG00000176092.13	-	protein_coding	KNOWN	AIM1L	10	20	0.712117
chr1	26326688	26327033	26326860	ENSG00000225854.2	+	processed_pseudogene	KNOWN	RP11-569G9.7	1	1	0.685672
chr1	26361634	26374522	26368078	ENSG00000176083.17	-	protein_coding	KNOWN	ZNF683	9	7	0.792942
chr1	26410778	26429722	26420250	ENSG00000131914.10	+	protein_coding	KNOWN	LIN28A	2	5	0.538878
chr1	26432282	26471294	26451788	ENSG00000117682.16	+	protein_coding	KNOWN	DHDDS	25	9	0.561855
chr1	26454653	26455187	26454920	ENSG00000223583.1	-	processed_pseudogene	KNOWN	RP3-476K8.4	1	1	0.624487
chr1	26462756	26467282	26465019	ENSG00000225891.1	-	antisense	KNOWN	RP3-476K8.3	1	4	0.624487
chr1	26472450	26475972	26474211	ENSG00000198830.10	+	protein_coding	KNOWN	HMGN2	10	7	0.790225
chr1	26519354	26520250	26519802	ENSG00000224129.1	-	processed_pseudogene	KNOWN	DPPA2P2	1	1	0.448685
chr1	26529761	26575030	26552395	ENSG00000117676.13	+	protein_coding	KNOWN	RPS6KA1	20	22	0.982359
chr1	26554542	26554593	26554567	ENSG00000238705.1	+	miRNA	KNOWN	MIR1976	1	1	1.022729
chr1	26593243	26593546	26593394	ENSG00000243905.3	-	misc_RNA	KNOWN	RN7SL679P	1	1	0.347249
chr1	26593940	26594041	26593990	ENSG00000252802.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.347249
chr1	26602369	26602432	26602400	ENSG00000252429.2	-	snRNA	KNOWN	RNU7-29P	1	1	0.347249
chr1	26640377	26640614	26640495	ENSG00000229247.2	-	processed_pseudogene	KNOWN	RP11-492M19.3	1	1	0.787658
chr1	26642286	26642389	26642337	ENSG00000238316.1	-	snoRNA	NOVEL	snoU13	1	1	0.787658
chr1	26647447	26647681	26647564	ENSG00000235069.2	+	processed_pseudogene	KNOWN	RP4-785J1.1	1	1	0.787658
chr1	26692132	26694131	26693131	ENSG00000260063.1	-	antisense	KNOWN	RP5-968P14.2	1	1	0.550480
chr1	26696033	26782104	26739068	ENSG00000117713.17	+	protein_coding	KNOWN	ARID1A	9	20	0.622991
chr1	26787472	26798398	26792935	ENSG00000060642.10	+	protein_coding	KNOWN	PIGV	6	5	0.562519
chr1	26814822	26815112	26814967	ENSG00000241188.3	+	misc_RNA	KNOWN	RN7SL165P	1	1	0.689233
chr1	26826710	26857602	26842156	ENSG00000204160.11	+	protein_coding	KNOWN	ZDHHC18	5	8	0.771350
chr1	26863138	26864457	26863797	ENSG00000175793.11	+	protein_coding	KNOWN	SFN	1	1	0.992456
chr1	26876133	26878245	26877189	ENSG00000226698.1	+	antisense	KNOWN	RP1-50O24.6	1	2	0.744893
chr1	26876133	26890297	26883215	ENSG00000142751.14	-	protein_coding	KNOWN	GPN2	5	5	0.746733
chr1	26890488	26900466	26895477	ENSG00000198746.12	-	protein_coding	KNOWN	GPATCH3	3	7	0.832348
chr1	26900238	26946862	26923550	ENSG00000090273.13	+	protein_coding	KNOWN	NUDC	4	9	0.660980
chr1	26911489	26913966	26912727	ENSG00000131910.4	-	protein_coding	KNOWN	NR0B2	1	2	0.643787
chr1	26949562	26960406	26954984	ENSG00000175707.8	-	protein_coding	KNOWN	KDF1	2	5	0.847423
chr1	26980165	26980975	26980570	ENSG00000172746.6	+	unprocessed_pseudogene	KNOWN	RPL12P13	1	2	0.942096
chr1	26983628	26984024	26983826	ENSG00000224064.1	+	processed_pseudogene	KNOWN	RP11-344H11.5	1	1	0.942096
chr1	26985897	26986340	26986118	ENSG00000225294.1	-	processed_pseudogene	KNOWN	OSTCP2	1	1	0.942096
chr1	26993707	27000898	26997302	ENSG00000253368.3	+	protein_coding	KNOWN	TRNP1	2	2	1.155257
chr1	27005020	27012836	27008928	ENSG00000158246.7	-	protein_coding	KNOWN	FAM46B	1	2	1.001516
chr1	27064991	27065365	27065178	ENSG00000280403.1	-	protein_coding	KNOWN	AL137860.1	1	1	0.762346
chr1	27098815	27166981	27132898	ENSG00000090020.10	-	protein_coding	KNOWN	SLC9A1	6	12	0.925719
chr1	27176751	27177277	27177014	ENSG00000229985.2	+	processed_pseudogene	KNOWN	RP11-40H20.5	1	1	0.621771
chr1	27200834	27201473	27201153	ENSG00000214973.3	-	processed_pseudogene	KNOWN	CHCHD3P3	1	1	0.649818
chr1	27206930	27207796	27207363	ENSG00000225159.1	+	processed_pseudogene	KNOWN	NPM1P39	1	1	0.649818
chr1	27211265	27211484	27211374	ENSG00000225990.2	+	processed_pseudogene	KNOWN	SNRPEP7	1	1	0.513693
chr1	27229106	27234352	27231729	ENSG00000224311.1	-	antisense	KNOWN	RP11-40H20.4	1	3	0.530966
chr1	27234516	27308633	27271574	ENSG00000142784.15	+	protein_coding	KNOWN	WDTC1	5	16	0.630923
chr1	27255464	27255567	27255515	ENSG00000252098.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.607489
chr1	27311240	27311838	27311539	ENSG00000243659.1	+	processed_pseudogene	KNOWN	RP11-4K3__A.3	1	2	1.001942
chr1	27322145	27336400	27329272	ENSG00000186501.14	+	protein_coding	KNOWN	TMEM222	11	8	1.065655
chr1	27325219	27325325	27325272	ENSG00000206888.1	+	snRNA	KNOWN	RNU6-48P	1	1	1.001942
chr1	27325329	27325796	27325562	ENSG00000241547.1	+	processed_pseudogene	KNOWN	ACTG1P20	1	1	1.001942
chr1	27325470	27325553	27325511	ENSG00000281023.1	+	miRNA	NOVEL	FO393419.1	1	1	1.001942
chr1	27342020	27353937	27347978	ENSG00000142765.17	+	protein_coding	KNOWN	SYTL1	11	15	1.180262
chr1	27355184	27366892	27361038	ENSG00000142733.14	-	protein_coding	KNOWN	MAP3K6	8	30	1.254076
chr1	27369112	27374824	27371968	ENSG00000142748.12	-	protein_coding	KNOWN	FCN3	4	8	1.097473
chr1	27379176	27383380	27381278	ENSG00000174950.10	-	protein_coding	KNOWN	CD164L2	3	6	1.068684
chr1	27389468	27390145	27389806	ENSG00000231207.1	+	processed_pseudogene	KNOWN	RP1-144C9.2	1	2	1.046310
chr1	27392644	27395814	27394229	ENSG00000181773.6	+	protein_coding	KNOWN	GPR3	1	2	0.964935
chr1	27404226	27490158	27447192	ENSG00000158195.10	-	protein_coding	KNOWN	WASF2	2	9	0.677792
chr1	27457198	27459582	27458390	ENSG00000241169.1	+	lincRNA	KNOWN	RP4-752I6.1	1	2	0.445629
chr1	27525805	27530561	27528183	ENSG00000237429.1	+	antisense	KNOWN	RP1-159A19.4	1	2	0.746269
chr1	27534035	27604431	27569233	ENSG00000126705.13	-	protein_coding	KNOWN	AHDC1	5	7	1.059788
chr1	27612064	27635277	27623670	ENSG00000000938.12	-	protein_coding	KNOWN	FGR	7	13	0.826091
chr1	27649419	27649610	27649514	ENSG00000235912.1	+	processed_pseudogene	KNOWN	RP1-159A19.3	1	1	0.596336
chr1	27660328	27662722	27661525	ENSG00000233975.1	-	lincRNA	KNOWN	RP11-288L9.1	1	2	0.682668
chr1	27666061	27672218	27669139	ENSG00000126709.14	-	protein_coding	KNOWN	IFI6	3	5	0.652975
chr1	27669468	27703063	27686265	ENSG00000225886.3	+	antisense	KNOWN	RP11-288L9.4	6	5	0.587813
chr1	27675603	27675709	27675656	ENSG00000206767.1	-	snRNA	KNOWN	RNU6-949P	1	1	0.600279
chr1	27686810	27687471	27687140	ENSG00000226662.2	-	processed_pseudogene	KNOWN	CHMP1AP1	1	1	0.600279
chr1	27693731	27693835	27693783	ENSG00000207095.1	+	snRNA	KNOWN	RNU6-424P	1	1	0.564873
chr1	27725979	27763122	27744550	ENSG00000009780.15	+	protein_coding	KNOWN	FAM76A	7	10	0.612708
chr1	27739091	27739439	27739265	ENSG00000231344.1	+	processed_pseudogene	KNOWN	RP3-426I6.2	1	1	0.604726
chr1	27739954	27740629	27740291	ENSG00000230833.1	+	processed_pseudogene	KNOWN	RPEP3	1	1	0.604726
chr1	27773183	27824452	27798817	ENSG00000117758.13	+	protein_coding	KNOWN	STX12	5	9	0.515431
chr1	27773858	27774041	27773949	ENSG00000269971.1	+	sense_intronic	KNOWN	RP3-426I6.5	1	1	0.797930
chr1	27809701	27809788	27809744	ENSG00000276889.1	+	miRNA	NOVEL	AL020997.1	1	1	0.488293
chr1	27819983	27820341	27820162	ENSG00000270031.1	+	sense_intronic	KNOWN	RP3-426I6.6	1	1	0.224299
chr1	27824538	27824643	27824590	ENSG00000223062.1	+	snRNA	KNOWN	RNU6-1245P	1	1	0.224299
chr1	27830778	27851676	27841227	ENSG00000117751.17	+	protein_coding	KNOWN	PPP1R8	5	7	0.352311
chr1	27834401	27834566	27834483	ENSG00000252947.1	+	scaRNA	KNOWN	SCARNA1	1	1	0.333000
chr1	27850574	27850744	27850659	ENSG00000278868.1	-	protein_coding	KNOWN	AL109927.1	1	1	0.573644
chr1	27872543	27886685	27879614	ENSG00000130775.15	+	protein_coding	KNOWN	THEMIS2	11	7	0.948929
chr1	27891524	27914746	27903135	ENSG00000117748.9	-	protein_coding	KNOWN	RPA2	5	9	0.460185
chr1	27934993	27959157	27947075	ENSG00000130768.14	+	protein_coding	KNOWN	SMPDL3B	6	8	0.546053
chr1	27938875	27960193	27949534	ENSG00000227050.1	-	antisense	KNOWN	RP11-460I13.2	1	5	0.551976
chr1	27959462	27968096	27963779	ENSG00000158156.7	+	protein_coding	KNOWN	XKR8	2	3	0.583132
chr1	27970344	28088696	28029520	ENSG00000158161.15	-	protein_coding	KNOWN	EYA3	8	18	0.351501
chr1	27990158	27990524	27990341	ENSG00000238231.2	-	processed_pseudogene	KNOWN	RP11-460I13.6	1	1	0.295738
chr1	28001639	28001894	28001766	ENSG00000281570.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.295738
chr1	28031884	28032180	28032032	ENSG00000240750.3	-	misc_RNA	KNOWN	RN7SL559P	1	1	0.077637
chr1	28091276	28091381	28091328	ENSG00000280526.1	+	miRNA	NOVEL	AL137792.1	1	1	0.395384
chr1	28095742	28096422	28096082	ENSG00000228589.3	-	processed_pseudogene	KNOWN	SPCS2P4	1	1	0.395384
chr1	28109739	28110298	28110018	ENSG00000228943.1	+	processed_pseudogene	KNOWN	RP5-1053E7.2	1	2	0.453938
chr1	28120449	28121321	28120885	ENSG00000214812.3	-	processed_pseudogene	KNOWN	RP5-1053E7.3	1	2	0.504855
chr1	28142737	28142841	28142789	ENSG00000253005.1	-	snRNA	KNOWN	RNU6-176P	1	1	0.356369
chr1	28147166	28193936	28170551	ENSG00000169403.11	-	protein_coding	KNOWN	PTAFR	3	3	0.615925
chr1	28199456	28233025	28216240	ENSG00000126698.10	-	protein_coding	KNOWN	DNAJC8	6	10	0.626195
chr1	28236109	28246906	28241507	ENSG00000130770.17	+	protein_coding	KNOWN	ATPIF1	4	3	0.499037
chr1	28239509	28241453	28240481	ENSG00000270605.1	-	antisense	KNOWN	RP5-1092A3.4	1	1	0.499037
chr1	28247144	28247568	28247356	ENSG00000271398.1	+	lincRNA	KNOWN	RP5-1092A3.5	1	1	0.499037
chr1	28259527	28282491	28271009	ENSG00000130766.4	+	protein_coding	KNOWN	SESN2	1	10	0.721616
chr1	28329002	28335967	28332484	ENSG00000130772.13	+	protein_coding	KNOWN	MED18	5	4	0.436556
chr1	28369582	28500369	28434975	ENSG00000204138.12	+	protein_coding	KNOWN	PHACTR4	9	17	0.451763
chr1	28422555	28422655	28422605	ENSG00000206779.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.556660
chr1	28453541	28453934	28453737	ENSG00000229820.2	+	processed_pseudogene	KNOWN	RP1-308E4.1	1	1	0.528091
chr1	28481362	28481480	28481421	ENSG00000221216.1	+	snRNA	KNOWN	RNU6ATAC27P	1	1	0.607450
chr1	28505943	28539300	28522621	ENSG00000180198.15	+	protein_coding	KNOWN	RCC1	12	13	0.870210
chr1	28505980	28510892	28508436	ENSG00000242125.3	+	sense_intronic	KNOWN	SNHG3	3	3	0.667730
chr1	28507366	28507571	28507468	ENSG00000274266.1	+	snoRNA	KNOWN	SNORA73A	1	1	0.592421
chr1	28508559	28508762	28508660	ENSG00000200087.1	+	snoRNA	KNOWN	SNORA73B	1	1	0.592421
chr1	28526318	28527227	28526772	ENSG00000231468.2	-	processed_pseudogene	KNOWN	PRDX3P2	1	2	1.006660
chr1	28544460	28546542	28545501	ENSG00000279443.1	+	TEC	KNOWN	RP4-669K10.8	1	1	0.697939
chr1	28553085	28578545	28565815	ENSG00000180098.9	+	protein_coding	KNOWN	TRNAU1AP	10	10	0.724759
chr1	28578538	28582983	28580760	ENSG00000197989.13	-	antisense	KNOWN	SNHG12	12	6	0.917418
chr1	28578749	28578822	28578785	ENSG00000221539.1	-	snoRNA	KNOWN	SNORD99	1	1	0.917418
chr1	28579764	28579893	28579828	ENSG00000278274.1	-	snoRNA	KNOWN	SNORA61	1	1	0.917418
chr1	28580381	28580512	28580446	ENSG00000273544.1	-	snoRNA	KNOWN	SNORA44	1	1	0.917418
chr1	28580920	28581056	28580988	ENSG00000274582.1	-	snoRNA	KNOWN	SNORA16A	1	1	0.917418
chr1	28580920	28581054	28580987	ENSG00000280498.1	-	snoRNA	KNOWN	SNORA16A	1	1	0.917418
chr1	28589323	28643085	28616204	ENSG00000120656.11	-	protein_coding	KNOWN	TAF12	4	6	0.712342
chr1	28592200	28595443	28593821	ENSG00000188060.6	+	protein_coding	KNOWN	RAB42	2	2	1.047445
chr1	28643228	28648581	28645904	ENSG00000229388.1	+	lincRNA	KNOWN	RP11-442N24__B.1	2	2	0.385983
chr1	28648600	28648730	28648665	ENSG00000270103.3	+	lincRNA	KNOWN	RNU11	1	1	0.385983
chr1	28648600	28648733	28648666	ENSG00000274978.1	+	snRNA	KNOWN	RNU11	1	1	0.385983
chr1	28668732	28719353	28694042	ENSG00000162419.12	+	protein_coding	KNOWN	GMEB1	4	10	0.576784
chr1	28689665	28689794	28689729	ENSG00000252777.1	+	scaRNA	NOVEL	SCARNA24	1	1	0.572618
chr1	28736621	28769775	28753198	ENSG00000198492.14	+	protein_coding	KNOWN	YTHDF2	10	6	0.385141
chr1	28812142	28871267	28841704	ENSG00000116329.10	+	protein_coding	KNOWN	OPRD1	2	4	0.444138
chr1	28870483	28877336	28873909	ENSG00000233427.1	-	antisense	KNOWN	RP1-212P9.3	1	3	0.660080
chr1	28881726	28881835	28881780	ENSG00000199756.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.660080
chr1	28887091	29120046	29003568	ENSG00000159023.18	+	protein_coding	KNOWN	EPB41	12	21	0.209193
chr1	28982278	28982608	28982443	ENSG00000225616.2	-	processed_pseudogene	KNOWN	RP4-604A21.1	1	1	0.256379
chr1	28985710	28985810	28985760	ENSG00000206704.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.256379
chr1	29041199	29041480	29041339	ENSG00000277958.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.178501
chr1	29119428	29123935	29121681	ENSG00000253304.1	-	protein_coding	KNOWN	TMEM200B	2	2	0.629842
chr1	29144494	29146994	29145744	ENSG00000225750.1	-	lincRNA	KNOWN	RP11-242O24.3	1	3	0.694442
chr1	29147743	29181987	29164865	ENSG00000116350.16	-	protein_coding	KNOWN	SRSF4	8	8	0.442572
chr1	29171285	29171453	29171369	ENSG00000277916.1	-	misc_RNA	NOVEL	uc_338	1	1	0.370456
chr1	29192873	29230942	29211907	ENSG00000116353.15	-	protein_coding	KNOWN	MECR	18	10	0.455946
chr1	29223933	29224816	29224374	ENSG00000237934.1	+	antisense	KNOWN	RP11-467D18.2	1	3	0.479508
chr1	29236516	29326813	29281664	ENSG00000060656.19	+	protein_coding	KNOWN	PTPRU	11	31	0.515177
chr1	29253573	29253672	29253622	ENSG00000221550.2	-	miRNA	NOVEL	AL645859.1	1	1	0.714290
chr1	29329620	29350114	29339867	ENSG00000230523.1	-	lincRNA	KNOWN	RP3-437I16.1	1	3	0.273340
chr1	29432481	29432562	29432521	ENSG00000266678.1	+	miRNA	NOVEL	AL139151.1	1	1	-0.000037
chr1	29488193	29496893	29492543	ENSG00000225011.4	-	unprocessed_pseudogene	KNOWN	RP11-810H18.1	1	2	0.203220
chr1	29644545	29644678	29644611	ENSG00000221126.1	-	miRNA	NOVEL	AC092265.1	1	1	0.261917
chr1	29708851	29709547	29709199	ENSG00000228176.1	-	lincRNA	KNOWN	RP4-656G21.1	1	2	0.485064
chr1	29884902	29885005	29884953	ENSG00000222787.1	+	miRNA	NOVEL	AL645944.1	1	1	-0.042658
chr1	29904865	29905357	29905111	ENSG00000270927.1	-	processed_pseudogene	KNOWN	RP11-179G8.1	1	1	0.049347
chr1	30013952	30037612	30025782	ENSG00000233399.2	-	lincRNA	KNOWN	RP11-111I12.1	1	7	0.190448
chr1	30140263	30141607	30140935	ENSG00000233372.1	+	lincRNA	KNOWN	RP5-893G23.1	1	2	0.443667
chr1	30226523	30226615	30226569	ENSG00000231251.1	+	processed_pseudogene	KNOWN	RP3-357I16.1	1	1	0.115324
chr1	30409560	30411638	30410599	ENSG00000236335.1	-	lincRNA	KNOWN	RP4-591L5.1	1	3	0.331698
chr1	30415825	30421108	30418466	ENSG00000231949.1	+	lincRNA	KNOWN	RP4-591L5.2	1	3	0.393936
chr1	30711277	30723587	30717432	ENSG00000162510.5	-	protein_coding	KNOWN	MATN1	3	8	0.531756
chr1	30718504	30726827	30722665	ENSG00000186056.9	+	antisense	KNOWN	MATN1-AS1	4	4	0.531756
chr1	30732469	30757820	30745144	ENSG00000162511.7	-	protein_coding	KNOWN	LAPTM5	3	8	0.645608
chr1	30739156	30739232	30739194	ENSG00000264773.1	-	miRNA	KNOWN	MIR4420	1	1	0.747727
chr1	30771747	30771987	30771867	ENSG00000280823.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.878353
chr1	30810378	30815553	30812965	ENSG00000229607.1	-	lincRNA	KNOWN	RP5-1125N11.1	1	2	0.704023
chr1	30824228	30834431	30829329	ENSG00000223382.4	+	lincRNA	KNOWN	RP5-1125N11.2	9	5	0.623044
chr1	30843823	30844110	30843966	ENSG00000222784.1	+	misc_RNA	KNOWN	RN7SKP91	1	1	0.517599
chr1	30858158	30860254	30859206	ENSG00000235143.1	+	antisense	KNOWN	RP1-65J11.5	1	2	0.745541
chr1	30869467	30908761	30889114	ENSG00000162512.15	-	protein_coding	KNOWN	SDC3	4	5	0.807470
chr1	30918469	30918735	30918602	ENSG00000266210.2	-	misc_RNA	KNOWN	RN7SL371P	1	1	0.865884
chr1	30931506	31065991	30998748	ENSG00000134644.15	-	protein_coding	KNOWN	PUM1	23	22	0.429024
chr1	31036734	31037240	31036987	ENSG00000237329.2	+	processed_pseudogene	KNOWN	RP11-201O14.1	1	1	0.415689
chr1	31050872	31051034	31050953	ENSG00000232768.1	+	processed_pseudogene	KNOWN	RP11-201O14.2	1	1	0.818069
chr1	31094987	31095558	31095272	ENSG00000215900.4	-	processed_pseudogene	KNOWN	SEPW1P	1	2	0.561477
chr1	31108188	31108623	31108405	ENSG00000225142.2	-	processed_pseudogene	KNOWN	RP11-490K7.1	1	1	0.561477
chr1	31179745	31239554	31209649	ENSG00000084628.9	-	protein_coding	KNOWN	NKAIN1	5	7	0.721446
chr1	31259568	31296782	31278175	ENSG00000060688.12	-	protein_coding	KNOWN	SNRNP40	7	10	0.342443
chr1	31263245	31263681	31263463	ENSG00000229447.2	-	processed_pseudogene	KNOWN	RP11-490K7.4	1	1	0.517476
chr1	31296982	31364953	31330967	ENSG00000121766.14	+	protein_coding	KNOWN	ZCCHC17	10	9	0.390229
chr1	31333067	31346799	31339933	ENSG00000229044.1	-	antisense	KNOWN	RP11-266K22.2	1	3	0.475639
chr1	31365625	31376850	31371237	ENSG00000121769.7	-	protein_coding	KNOWN	FABP3	4	6	0.509595
chr1	31409565	31434680	31422122	ENSG00000168528.11	+	protein_coding	KNOWN	SERINC2	6	11	0.679816
chr1	31487589	31488930	31488259	ENSG00000215899.3	-	processed_pseudogene	KNOWN	RP11-439L8.2	1	1	0.523424
chr1	31497577	31497683	31497630	ENSG00000206981.1	-	snRNA	KNOWN	RNU6-40P	1	1	0.697460
chr1	31500085	31540885	31520485	ENSG00000260386.5	+	unitary_pseudogene	KNOWN	LINC01225	7	9	0.594755
chr1	31503631	31503744	31503687	ENSG00000265961.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.697460
chr1	31518435	31524245	31521340	ENSG00000223907.1	+	lincRNA	KNOWN	LINC01226	2	3	0.654724
chr1	31538044	31540769	31539406	ENSG00000260636.1	+	sense_intronic	KNOWN	RP11-439L8.5	1	3	0.391045
chr1	31571585	31575573	31573579	ENSG00000229167.1	-	antisense	KNOWN	RP11-73M7.1	1	3	0.755756
chr1	31576485	31587686	31582085	ENSG00000142910.15	+	protein_coding	KNOWN	TINAGL1	11	12	0.755756
chr1	31617686	31632518	31625102	ENSG00000121764.11	+	protein_coding	KNOWN	HCRTR1	5	9	0.821970
chr1	31629862	31644896	31637379	ENSG00000162517.12	-	protein_coding	KNOWN	PEF1	8	5	1.063006
chr1	31644049	31660162	31652105	ENSG00000235790.7	+	antisense	KNOWN	RP11-73M7.6	24	6	0.992700
chr1	31644694	31649371	31647032	ENSG00000264078.1	+	antisense	KNOWN	RP11-73M7.9	1	2	1.065681
chr1	31652247	31704319	31678283	ENSG00000084636.17	-	protein_coding	KNOWN	COL16A1	17	71	1.325726
chr1	31727117	31764893	31746005	ENSG00000121753.12	-	protein_coding	KNOWN	ADGRB2	15	33	1.241994
chr1	31758660	31758735	31758697	ENSG00000266580.1	-	miRNA	KNOWN	MIR4254	1	1	1.158795
chr1	31789130	31791322	31790226	ENSG00000254545.1	+	antisense	KNOWN	RP11-84A19.3	1	2	1.106535
chr1	31790422	31816051	31803236	ENSG00000134668.12	-	protein_coding	KNOWN	SPOCD1	14	16	0.974221
chr1	31842019	31855568	31848793	ENSG00000203620.2	-	lincRNA	KNOWN	RP11-84A19.2	1	2	0.638480
chr1	31851913	31921841	31886877	ENSG00000269967.1	-	lincRNA	KNOWN	RP11-84A19.4	1	2	0.565343
chr1	31906421	31944856	31925638	ENSG00000184007.17	-	protein_coding	KNOWN	PTP4A2	21	7	0.544609
chr1	31928144	31928300	31928222	ENSG00000281319.1	-	miRNA	NOVEL	AL136115.1	1	1	0.494956
chr1	31933020	31933975	31933497	ENSG00000228634.1	+	lincRNA	KNOWN	RP4-534N18.2	1	2	0.616413
chr1	32013829	32060850	32037339	ENSG00000121774.17	+	protein_coding	KNOWN	KHDRBS1	4	11	0.593614
chr1	32052291	32073474	32062882	ENSG00000203325.3	-	antisense	KNOWN	RP11-277A4.4	1	3	0.535486
chr1	32072031	32102866	32087448	ENSG00000121775.17	+	protein_coding	KNOWN	TMEM39B	9	11	0.907884
chr1	32086949	32087007	32086978	ENSG00000266203.1	+	miRNA	KNOWN	MIR5585	1	1	0.907354
chr1	32087523	32087813	32087668	ENSG00000276493.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.907354
chr1	32108038	32176568	32142303	ENSG00000025800.13	+	protein_coding	KNOWN	KPNA6	4	14	0.816658
chr1	32170733	32176568	32173650	ENSG00000250135.1	+	sense_intronic	KNOWN	RP4-622L5.2	1	2	0.939989
chr1	32179686	32198285	32188985	ENSG00000084652.15	+	protein_coding	KNOWN	TXLNA	2	11	0.985081
chr1	32200386	32205387	32202886	ENSG00000160050.14	+	protein_coding	KNOWN	CCDC28B	5	6	1.041204
chr1	32204769	32206814	32205791	ENSG00000224066.1	-	antisense	KNOWN	RP4-622L5.7	2	4	1.041204
chr1	32205661	32208687	32207174	ENSG00000160051.11	+	protein_coding	KNOWN	IQCC	3	5	1.041204
chr1	32209094	32216196	32212645	ENSG00000222046.2	+	protein_coding	KNOWN	DCDC2B	2	9	1.085520
chr1	32214472	32222359	32218415	ENSG00000160055.19	-	protein_coding	KNOWN	TMEM234	12	11	1.091992
chr1	32221928	32231604	32226766	ENSG00000084623.11	+	protein_coding	KNOWN	EIF3I	6	11	1.053739
chr1	32231658	32241620	32236639	ENSG00000220785.7	-	transcribed_unprocessed_pseudogene	KNOWN	MTMR9LP	4	10	0.861379
chr1	32247233	32248856	32248044	ENSG00000183615.5	+	protein_coding	KNOWN	FAM167B	1	2	0.861379
chr1	32251239	32286165	32268702	ENSG00000182866.16	+	protein_coding	KNOWN	LCK	14	13	0.905179
chr1	32269338	32269597	32269467	ENSG00000277617.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.007831
chr1	32286452	32286561	32286506	ENSG00000252450.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.786056
chr1	32292086	32333635	32312860	ENSG00000116478.11	+	protein_coding	KNOWN	HDAC1	10	14	0.861427
chr1	32333832	32336379	32335105	ENSG00000175130.6	-	protein_coding	KNOWN	MARCKSL1	1	2	0.988415
chr1	32349194	32350663	32349928	ENSG00000233775.1	-	lincRNA	KNOWN	RP4-811H24.9	1	2	0.945605
chr1	32351521	32364312	32357916	ENSG00000162526.6	+	protein_coding	KNOWN	TSSK3	4	3	0.893705
chr1	32361270	32364278	32362774	ENSG00000225828.1	-	protein_coding	KNOWN	FAM229A	4	3	0.893705
chr1	32365103	32394731	32379917	ENSG00000160058.18	-	protein_coding	KNOWN	BSDC1	16	12	0.930947
chr1	32402109	32403115	32402612	ENSG00000224333.1	-	processed_pseudogene	KNOWN	GAPDHP20	1	1	0.437550
chr1	32421979	32422319	32422149	ENSG00000270850.1	+	processed_pseudogene	KNOWN	RP11-395N6.4	1	1	0.665320
chr1	32423214	32426789	32425001	ENSG00000229259.1	-	unprocessed_pseudogene	KNOWN	LRRC37A12P	1	4	0.665320
chr1	32457835	32458135	32457985	ENSG00000263529.2	+	misc_RNA	KNOWN	RN7SL122P	1	1	0.272113
chr1	32465057	32600792	32532924	ENSG00000254553.1	+	protein_coding	KNOWN	RP1-27O5.3	1	10	0.577990
chr1	32465069	32496686	32480877	ENSG00000273274.1	+	protein_coding	KNOWN	ZBTB8B	1	4	0.417348
chr1	32539427	32605939	32572683	ENSG00000160062.14	+	protein_coding	KNOWN	ZBTB8A	2	5	0.623253
chr1	32600172	32650903	32625537	ENSG00000176261.15	-	protein_coding	KNOWN	ZBTB8OS	15	7	0.460431
chr1	32639951	32640052	32640001	ENSG00000200591.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.388041
chr1	32651142	32686211	32668676	ENSG00000162521.18	+	protein_coding	KNOWN	RBBP4	19	12	0.705726
chr1	32680360	32703596	32691978	ENSG00000162520.14	-	protein_coding	KNOWN	SYNC	4	5	0.617366
chr1	32717734	32725237	32721485	ENSG00000224409.1	-	antisense	KNOWN	RP11-114B7.6	1	2	1.048048
chr1	32741885	32774970	32758427	ENSG00000162522.10	+	protein_coding	KNOWN	KIAA1522	5	7	0.833171
chr1	32775237	32818153	32796695	ENSG00000134684.10	-	protein_coding	KNOWN	YARS	10	13	0.914182
chr1	32816767	32858879	32837823	ENSG00000116497.17	+	protein_coding	KNOWN	S100PBP	16	7	0.642670
chr1	32862268	32872482	32867375	ENSG00000160097.15	-	protein_coding	KNOWN	FNDC5	6	6	0.599419
chr1	32885994	32898441	32892217	ENSG00000121905.9	+	protein_coding	KNOWN	HPCA	5	4	0.686780
chr1	32894594	32901438	32898016	ENSG00000121900.18	-	protein_coding	KNOWN	TMEM54	6	6	0.555939
chr1	32936445	32964685	32950565	ENSG00000116514.16	-	protein_coding	KNOWN	RNF19B	3	9	0.537525
chr1	32973553	32974463	32974008	ENSG00000278966.2	+	TEC	KNOWN	RP5-1174N9.2	2	1	0.430794
chr1	32979947	32980472	32980209	ENSG00000217644.5	+	processed_pseudogene	KNOWN	RP4-803A2.1	1	1	0.430794
chr1	32986952	32988233	32987592	ENSG00000239670.1	+	unprocessed_pseudogene	KNOWN	RP4-803A2.2	1	2	0.430794
chr1	32987075	33032469	33009772	ENSG00000236065.2	+	antisense	KNOWN	RP1-117O3.2	1	2	0.453883
chr1	33007940	33080996	33044468	ENSG00000004455.16	-	protein_coding	KNOWN	AK2	15	8	0.408858
chr1	33029232	33029576	33029404	ENSG00000276645.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.301087
chr1	33081104	33120530	33100817	ENSG00000142920.16	+	protein_coding	KNOWN	AZIN2	19	12	0.556737
chr1	33141871	33143230	33142550	ENSG00000278997.1	-	TEC	KNOWN	RP11-131M11.2	1	1	0.446220
chr1	33145402	33182059	33163730	ENSG00000116525.13	-	protein_coding	KNOWN	TRIM62	4	5	0.512098
chr1	33162851	33166298	33164574	ENSG00000279179.1	+	TEC	KNOWN	RP11-131M11.3	1	1	0.550691
chr1	33256545	33300719	33278632	ENSG00000160094.14	+	protein_coding	KNOWN	ZNF362	5	9	0.542910
chr1	33261212	33261680	33261446	ENSG00000270115.1	+	lincRNA	KNOWN	RP11-415J8.7	1	1	0.313282
chr1	33306766	33321098	33313932	ENSG00000184389.9	-	protein_coding	KNOWN	A3GALT2	1	5	0.537745
chr1	33307348	33349245	33328296	ENSG00000225313.5	+	antisense	KNOWN	RP11-415J8.3	11	4	0.660646
chr1	33323623	33431052	33377337	ENSG00000134686.16	-	protein_coding	KNOWN	PHC2	12	14	0.533056
chr1	33332431	33332541	33332486	ENSG00000266239.2	-	miRNA	NOVEL	AL513327.1	1	1	0.797544
chr1	33336566	33336864	33336715	ENSG00000222112.1	-	misc_RNA	KNOWN	RN7SKP16	1	1	0.797544
chr1	33350352	33363245	33356798	ENSG00000233246.1	+	antisense	KNOWN	RP11-415J8.5	1	3	0.709048
chr1	33442025	33442111	33442068	ENSG00000221225.1	-	miRNA	NOVEL	AL138837.1	1	1	0.341220
chr1	33466249	33468954	33467601	ENSG00000234512.1	+	unitary_pseudogene	KNOWN	TLR12P	1	1	0.441066
chr1	33472645	33496507	33484576	ENSG00000121903.14	+	protein_coding	KNOWN	ZSCAN20	3	8	0.372863
chr1	33512008	33512743	33512375	ENSG00000235907.2	-	processed_pseudogene	KNOWN	RP4-580O19.2	1	1	0.175320
chr1	33513999	34165842	33839920	ENSG00000121904.17	-	protein_coding	KNOWN	CSMD2	10	71	0.104104
chr1	33732499	33732635	33732567	ENSG00000280715.1	-	miRNA	NOVEL	AL161643.1	1	1	0.091992
chr1	33838523	33840140	33839331	ENSG00000227000.2	+	processed_pseudogene	KNOWN	HSPD1P14	1	1	0.129662
chr1	33860475	33864791	33862633	ENSG00000176256.10	+	protein_coding	KNOWN	HMGB4	4	4	0.063423
chr1	33868953	33885458	33877205	ENSG00000231163.5	+	antisense	KNOWN	CSMD2-AS1	6	8	0.260198
chr1	34112949	34113063	34113006	ENSG00000201148.1	+	rRNA	KNOWN	RNA5SP42	1	1	-0.325514
chr1	34166883	34219131	34193007	ENSG00000142698.14	+	protein_coding	KNOWN	C1orf94	2	7	0.198111
chr1	34175866	34175949	34175907	ENSG00000221053.1	-	miRNA	NOVEL	AC115286.1	1	1	0.237843
chr1	34276859	34277292	34277075	ENSG00000270241.1	-	processed_pseudogene	KNOWN	RP4-657M3.2	1	1	-0.107317
chr1	34669599	34669694	34669646	ENSG00000207941.1	-	miRNA	KNOWN	MIR552	1	1	0.148575
chr1	34712737	34859816	34786276	ENSG00000163866.8	-	protein_coding	KNOWN	SMIM12	6	5	0.231916
chr1	34755047	34758512	34756779	ENSG00000189280.3	+	protein_coding	KNOWN	GJB5	1	2	0.558458
chr1	34759741	34763724	34761732	ENSG00000189433.5	+	protein_coding	KNOWN	GJB4	1	2	0.558458
chr1	34761426	34788097	34774761	ENSG00000255811.1	-	antisense	KNOWN	RP1-34M23.5	1	2	0.382345
chr1	34778561	34778644	34778602	ENSG00000216162.1	-	miRNA	NOVEL	AL121988.1	1	1	0.298921
chr1	34781189	34786369	34783779	ENSG00000188910.7	+	protein_coding	KNOWN	GJB3	2	2	0.298921
chr1	34792998	34795747	34794372	ENSG00000187513.8	+	protein_coding	KNOWN	GJA4	2	2	0.372948
chr1	34850694	34851555	34851124	ENSG00000230163.1	+	antisense	KNOWN	RP5-997D16.2	1	2	0.499416
chr1	34865436	34929585	34897510	ENSG00000116544.11	-	protein_coding	KNOWN	DLGAP3	3	12	0.126790
chr1	34974356	34985313	34979834	ENSG00000241014.1	-	processed_transcript	KNOWN	RP11-244H3.1	2	3	0.353484
chr1	34981533	35031741	35006637	ENSG00000271741.1	-	protein_coding	KNOWN	RP11-244H3.4	1	17	0.119162
chr1	34981535	34985353	34983444	ENSG00000243749.1	-	protein_coding	KNOWN	ZMYM6NB	1	3	0.353484
chr1	34986165	35031968	35009066	ENSG00000163867.16	-	protein_coding	KNOWN	ZMYM6	9	16	0.095724
chr1	35053468	35059271	35056369	ENSG00000233940.1	+	processed_pseudogene	KNOWN	RPL12P45	1	2	0.482782
chr1	35059786	35115859	35087822	ENSG00000197056.9	+	protein_coding	KNOWN	ZMYM1	10	11	0.210913
chr1	35122022	35122484	35122253	ENSG00000228348.1	+	processed_pseudogene	KNOWN	EFCAB14P1	1	1	0.010050
chr1	35176378	35193148	35184763	ENSG00000116560.10	-	protein_coding	KNOWN	SFPQ	10	10	0.510286
chr1	35195969	35196062	35196015	ENSG00000201868.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.413920
chr1	35268967	35422058	35345512	ENSG00000146463.11	+	protein_coding	KNOWN	ZMYM4	6	30	0.279365
chr1	35292196	35292498	35292347	ENSG00000240374.3	-	misc_RNA	KNOWN	RN7SL503P	1	1	0.417762
chr1	35310274	35310425	35310349	ENSG00000201542.1	+	snoRNA	NOVEL	SNORA62	1	1	0.183914
chr1	35350722	35351607	35351164	ENSG00000229994.1	+	processed_pseudogene	KNOWN	RPL5P4	1	1	0.243058
chr1	35358822	35366077	35362449	ENSG00000227409.1	-	antisense	KNOWN	ZMYM4-AS1	1	2	0.243058
chr1	35399997	35400319	35400158	ENSG00000278702.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.168613
chr1	35433490	35557950	35495720	ENSG00000142687.17	-	protein_coding	KNOWN	KIAA0319L	20	21	0.353396
chr1	35509742	35511438	35510590	ENSG00000236274.1	+	processed_pseudogene	KNOWN	RP4-728D4.3	1	4	0.133522
chr1	35557473	35567274	35562373	ENSG00000020129.15	+	protein_coding	KNOWN	NCDN	6	8	0.671078
chr1	35569813	35577729	35573771	ENSG00000239636.1	-	antisense	KNOWN	RP4-728D4.2	2	3	0.676816
chr1	35573370	35595328	35584349	ENSG00000116819.6	+	protein_coding	KNOWN	TFAP2E	1	7	0.687795
chr1	35599544	35641844	35620694	ENSG00000126067.11	-	protein_coding	KNOWN	PSMB2	3	6	0.485913
chr1	35713875	35719472	35716673	ENSG00000142686.7	-	protein_coding	KNOWN	C1orf216	3	3	0.547836
chr1	35720218	35769967	35745092	ENSG00000092853.13	-	protein_coding	KNOWN	CLSPN	6	25	0.381996
chr1	35739389	35743576	35741482	ENSG00000232335.1	+	antisense	KNOWN	RP11-435D7.3	1	2	0.567011
chr1	35808172	35857890	35833031	ENSG00000134698.10	+	protein_coding	KNOWN	AGO4	3	18	0.382383
chr1	35869808	35930528	35900168	ENSG00000092847.11	+	protein_coding	KNOWN	AGO1	3	19	0.265085
chr1	35873270	35873752	35873511	ENSG00000271164.1	-	processed_pseudogene	KNOWN	RP4-789D17.4	1	1	0.212622
chr1	35929720	35930115	35929917	ENSG00000271914.1	-	lincRNA	KNOWN	RP4-789D17.5	1	1	0.305065
chr1	35930718	36072500	36001609	ENSG00000126070.19	+	protein_coding	KNOWN	AGO3	7	21	0.261713
chr1	35992109	36013630	36002869	ENSG00000271554.1	-	antisense	KNOWN	RP4-665N4.8	2	3	0.363889
chr1	36080066	36084026	36082046	ENSG00000232862.5	-	transcribed_processed_pseudogene	KNOWN	RP4-665N4.4	2	3	0.274470
chr1	36084075	36088275	36086175	ENSG00000092850.11	+	protein_coding	KNOWN	TEKT2	3	10	0.274470
chr1	36088875	36093932	36091403	ENSG00000116863.10	+	protein_coding	KNOWN	ADPRHL2	1	6	0.736153
chr1	36095236	36125220	36110228	ENSG00000171812.11	-	protein_coding	KNOWN	COL8A2	4	4	0.835017
chr1	36136570	36156053	36146311	ENSG00000054116.11	-	protein_coding	KNOWN	TRAPPC3	10	5	0.758399
chr1	36155579	36180849	36168214	ENSG00000116871.15	+	protein_coding	KNOWN	MAP7D1	13	18	0.831466
chr1	36191915	36192170	36192042	ENSG00000264592.2	+	misc_RNA	KNOWN	RN7SL131P	1	1	0.834604
chr1	36224416	36305357	36264886	ENSG00000054118.13	+	protein_coding	KNOWN	THRAP3	4	13	0.560501
chr1	36241898	36242156	36242027	ENSG00000231849.1	-	processed_pseudogene	KNOWN	UBE2V2P4	1	1	0.625115
chr1	36256467	36256559	36256513	ENSG00000278491.1	+	miRNA	NOVEL	AL360074.1	1	1	0.429387
chr1	36306387	36324886	36315636	ENSG00000214193.9	+	protein_coding	KNOWN	SH3D21	7	16	0.878838
chr1	36322031	36324154	36323092	ENSG00000142694.6	-	protein_coding	KNOWN	EVA1B	2	3	0.948759
chr1	36323734	36329221	36326477	ENSG00000116883.8	+	antisense	KNOWN	RP11-268J15.5	1	2	0.948759
chr1	36339624	36385896	36362760	ENSG00000196182.10	-	protein_coding	KNOWN	STK40	8	12	1.054373
chr1	36391238	36397892	36394565	ENSG00000181817.5	-	protein_coding	KNOWN	LSM10	3	4	0.682471
chr1	36402721	36402859	36402790	ENSG00000222821.1	-	snRNA	KNOWN	RNU4-27P	1	1	0.682471
chr1	36415827	36450451	36433139	ENSG00000116885.18	-	protein_coding	KNOWN	OSCP1	12	11	0.868393
chr1	36418450	36418578	36418514	ENSG00000201448.1	-	snoRNA	NOVEL	SNORA63	1	1	0.820508
chr1	36455718	36464437	36460077	ENSG00000116898.11	-	protein_coding	KNOWN	MRPS15	4	8	0.495534
chr1	36466043	36483278	36474660	ENSG00000119535.17	-	protein_coding	KNOWN	CSF3R	15	18	0.710018
chr1	36630335	36630857	36630596	ENSG00000230214.1	+	processed_pseudogene	KNOWN	FTLP18	1	1	0.071032
chr1	36630807	36630885	36630846	ENSG00000281218.1	-	miRNA	NOVEL	AL080286.1	1	1	0.071032
chr1	36773140	36775768	36774454	ENSG00000234481.1	+	antisense	KNOWN	RP4-614N24.1	1	2	0.342315
chr1	36795527	37034129	36914828	ENSG00000163873.9	-	protein_coding	KNOWN	GRIK3	4	16	0.160247
chr1	36909316	36909416	36909366	ENSG00000280570.1	-	miRNA	NOVEL	AC117945.1	1	1	-0.147584
chr1	37161563	37161634	37161598	ENSG00000264698.1	+	miRNA	KNOWN	MIR4255	1	1	-0.249928
chr1	37203610	37203716	37203663	ENSG00000207328.1	+	snRNA	KNOWN	RNU6-636P	1	1	-0.272772
chr1	37262739	37325100	37293919	ENSG00000223944.1	-	lincRNA	KNOWN	RP5-1180C18.1	1	4	0.085691
chr1	37264677	37264786	37264731	ENSG00000252368.1	-	rRNA	KNOWN	RNA5SP43	1	1	0.259449
chr1	37330852	37330996	37330924	ENSG00000230451.2	+	processed_pseudogene	KNOWN	RPS29P6	1	1	0.107020
chr1	37454879	37474411	37464645	ENSG00000233621.1	-	antisense	KNOWN	LINC01137	1	3	0.507424
chr1	37474552	37484379	37479465	ENSG00000163874.8	+	protein_coding	KNOWN	ZC3H12A	3	6	0.501383
chr1	37480230	37480289	37480259	ENSG00000278228.1	+	miRNA	KNOWN	MIR6732	1	1	0.501383
chr1	37492575	37514774	37503674	ENSG00000163875.15	-	protein_coding	KNOWN	MEAF6	9	9	0.732882
chr1	37500935	37500994	37500964	ENSG00000263675.1	-	miRNA	KNOWN	MIR5581	1	1	0.836433
chr1	37534449	37554302	37544375	ENSG00000163877.9	-	protein_coding	KNOWN	SNIP1	3	4	0.270796
chr1	37544763	37545294	37545028	ENSG00000232273.1	+	processed_pseudogene	KNOWN	FTH1P1	1	1	0.257801
chr1	37556247	37556499	37556373	ENSG00000237749.4	+	processed_pseudogene	KNOWN	RP3-423B22.5	1	1	0.317759
chr1	37556919	37566857	37561888	ENSG00000163879.10	+	protein_coding	KNOWN	DNALI1	5	6	0.317759
chr1	37566816	37595935	37581375	ENSG00000134697.12	-	protein_coding	KNOWN	GNL2	9	16	0.395765
chr1	37611350	37634923	37623136	ENSG00000169218.13	-	protein_coding	KNOWN	RSPO1	4	8	0.325848
chr1	37681570	37692249	37686909	ENSG00000116922.14	-	protein_coding	KNOWN	C1orf109	14	7	0.636789
chr1	37692418	37709719	37701068	ENSG00000134690.10	+	protein_coding	KNOWN	CDCA8	2	11	0.496746
chr1	37713880	37765133	37739506	ENSG00000183317.16	-	protein_coding	KNOWN	EPHA10	11	18	0.429766
chr1	37737955	37738054	37738004	ENSG00000200421.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.566235
chr1	37776670	37779418	37778044	ENSG00000214141.4	+	processed_pseudogene	KNOWN	ACTN4P2	1	2	0.334742
chr1	37782457	37782885	37782671	ENSG00000227416.2	-	processed_pseudogene	KNOWN	RP11-109P14.2	1	1	0.334742
chr1	37793802	37801137	37797469	ENSG00000185090.14	+	protein_coding	KNOWN	MANEAL	5	4	0.429387
chr1	37799720	37800879	37800299	ENSG00000233728.1	-	antisense	KNOWN	RP11-109P14.9	1	2	0.429387
chr1	37802944	37808185	37805564	ENSG00000196449.3	-	protein_coding	KNOWN	YRDC	1	5	0.429387
chr1	37806979	37809454	37808216	ENSG00000197982.13	+	protein_coding	KNOWN	C1orf122	4	3	0.429387
chr1	37809567	37859620	37834593	ENSG00000188786.9	-	protein_coding	KNOWN	MTF1	2	11	0.497441
chr1	37840986	37841676	37841331	ENSG00000235673.1	+	processed_pseudogene	KNOWN	RP11-109P14.8	1	1	0.281594
chr1	37860697	37861580	37861138	ENSG00000230955.1	+	antisense	KNOWN	RP11-109P14.10	1	2	0.741371
chr1	37860697	37947057	37903877	ENSG00000204084.12	-	protein_coding	KNOWN	INPP5B	11	24	0.529360
chr1	37884237	37884317	37884277	ENSG00000252448.1	+	snoRNA	NOVEL	SNORA63	1	1	0.605616
chr1	37885023	37885117	37885070	ENSG00000222282.1	+	snRNA	KNOWN	RNU6-584P	1	1	0.605616
chr1	37953508	37953780	37953644	ENSG00000277168.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.850602
chr1	37956975	37990921	37973948	ENSG00000183431.11	-	protein_coding	KNOWN	SF3A3	8	17	0.420506
chr1	37991462	37991569	37991515	ENSG00000212541.1	+	snRNA	KNOWN	RNU6-510P	1	1	0.662484
chr1	37996770	38005606	38001188	ENSG00000183386.9	-	protein_coding	KNOWN	FHL3	5	6	0.662484
chr1	38009258	38024824	38017041	ENSG00000183520.11	+	protein_coding	KNOWN	UTP11L	4	8	0.847676
chr1	38043827	38046794	38045310	ENSG00000185668.6	-	protein_coding	KNOWN	POU3F1	1	1	0.512484
chr1	38047314	38119025	38083169	ENSG00000224592.5	+	lincRNA	KNOWN	RP5-884C9.2	2	5	0.313930
chr1	38080572	38080911	38080741	ENSG00000223589.2	-	processed_pseudogene	KNOWN	RP5-884C9.3	1	1	0.228053
chr1	38089231	38089329	38089280	ENSG00000265596.1	+	miRNA	KNOWN	MIR3659	1	1	0.228053
chr1	38209034	38214767	38211900	ENSG00000237290.1	-	lincRNA	KNOWN	LINC01343	1	4	0.308464
chr1	38383838	38384422	38384130	ENSG00000275350.1	-	processed_pseudogene	KNOWN	RP11-329N22.2	1	1	-0.357811
chr1	38396659	38396765	38396712	ENSG00000200796.1	+	snRNA	KNOWN	RNU6-753P	1	1	-0.376288
chr1	38474875	38496034	38485454	ENSG00000238063.2	+	lincRNA	KNOWN	RP11-329N22.1	4	3	-0.225095
chr1	38708931	38710890	38709910	ENSG00000215895.4	+	processed_pseudogene	KNOWN	RP11-334L9.1	1	1	-0.311150
chr1	38838198	38859823	38849010	ENSG00000116954.7	-	protein_coding	KNOWN	RRAGC	4	7	-0.089868
chr1	38839333	38874494	38856913	ENSG00000273637.1	-	processed_transcript	KNOWN	RP5-864K19.7	1	12	-0.031151
chr1	38860000	38919396	38889698	ENSG00000228436.2	+	antisense	KNOWN	RP5-864K19.4	3	4	0.310969
chr1	38862964	38874105	38868534	ENSG00000214114.8	-	protein_coding	KNOWN	MYCBP	4	5	0.068153
chr1	38864501	38881617	38873059	ENSG00000274944.4	-	protein_coding	KNOWN	RP5-864K19.6	4	7	0.167387
chr1	38874451	38881587	38878019	ENSG00000131233.9	-	protein_coding	KNOWN	GJA9	2	2	0.270137
chr1	38885807	38941799	38913803	ENSG00000158315.10	-	protein_coding	KNOWN	RHBDL2	3	8	0.387894
chr1	38926870	38926977	38926923	ENSG00000199963.1	+	snRNA	KNOWN	RNU6-605P	1	1	0.344266
chr1	38950825	38950925	38950875	ENSG00000207466.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.139040
chr1	38958275	38958925	38958600	ENSG00000235549.1	-	processed_pseudogene	KNOWN	EIF1P2	1	2	0.139040
chr1	38991223	39006059	38998641	ENSG00000174574.15	+	protein_coding	KNOWN	AKIRIN1	4	5	0.560946
chr1	39026318	39034636	39030477	ENSG00000168653.10	+	protein_coding	KNOWN	NDUFS5	2	3	0.380758
chr1	39081316	39487177	39284246	ENSG00000127603.23	+	protein_coding	KNOWN	MACF1	34	101	0.423177
chr1	39120940	39121043	39120991	ENSG00000206654.1	-	snRNA	KNOWN	RNU6-608P	1	1	0.367965
chr1	39154164	39154296	39154230	ENSG00000222378.1	-	rRNA	KNOWN	RNA5SP44	1	1	0.485423
chr1	39206512	39206957	39206734	ENSG00000270040.1	+	sense_intronic	KNOWN	RP11-416A14.1	1	1	0.467329
chr1	39249838	39257649	39253743	ENSG00000226438.1	-	antisense	KNOWN	RP11-420K8.1	1	3	0.532690
chr1	39304294	39304898	39304596	ENSG00000217897.2	-	processed_pseudogene	KNOWN	HSPE1P8	1	2	0.348140
chr1	39491646	39525935	39508790	ENSG00000183682.7	+	protein_coding	KNOWN	BMP8A	1	7	0.798905
chr1	39514956	39516490	39515723	ENSG00000237624.1	+	unprocessed_pseudogene	KNOWN	OXCT2P1	1	1	0.773816
chr1	39522280	39546187	39534233	ENSG00000182109.7	-	antisense	KNOWN	RP11-69E11.4	7	5	0.752141
chr1	39531838	39558707	39545272	ENSG00000243970.1	-	unprocessed_pseudogene	KNOWN	PPIEL	1	7	0.622142
chr1	39560816	39576790	39568803	ENSG00000090621.13	-	protein_coding	KNOWN	PABPC4	25	16	0.594888
chr1	39565160	39573203	39569181	ENSG00000228060.1	+	antisense	KNOWN	RP11-69E11.8	1	4	0.580890
chr1	39567374	39567508	39567441	ENSG00000201457.1	-	snoRNA	KNOWN	SNORA55	1	1	0.372579
chr1	39624153	39639945	39632049	ENSG00000163909.7	-	protein_coding	KNOWN	HEYL	1	5	0.451884
chr1	39633416	39633903	39633659	ENSG00000225903.1	+	antisense	KNOWN	RP1-144F13.3	1	2	0.498498
chr1	39659121	39672038	39665579	ENSG00000116981.3	-	protein_coding	KNOWN	NT5C1A	1	6	0.486562
chr1	39678648	39691689	39685168	ENSG00000116983.12	-	protein_coding	KNOWN	HPCAL4	3	5	0.640093
chr1	39692182	39763914	39728048	ENSG00000084072.16	+	protein_coding	KNOWN	PPIE	15	11	0.478532
chr1	39718028	39718595	39718311	ENSG00000225333.6	+	processed_pseudogene	KNOWN	RP1-144F13.4	1	1	0.391552
chr1	39723566	39723627	39723596	ENSG00000252413.1	-	snRNA	KNOWN	RNU7-121P	1	1	0.391552
chr1	39757182	39788861	39773021	ENSG00000116985.10	-	protein_coding	KNOWN	BMP8B	2	7	0.662939
chr1	39769523	39771348	39770435	ENSG00000198754.5	-	protein_coding	KNOWN	OXCT2	1	1	0.742475
chr1	39788976	39790171	39789573	ENSG00000261798.1	+	antisense	KNOWN	RP1-118J21.25	1	1	0.817558
chr1	39795843	39795996	39795919	ENSG00000229213.1	-	unprocessed_pseudogene	KNOWN	RP1-118J21.24	1	1	0.405927
chr1	39841022	39883511	39862266	ENSG00000043514.15	-	protein_coding	KNOWN	TRIT1	15	11	0.228027
chr1	39881566	39881678	39881622	ENSG00000202222.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.206856
chr1	39895426	39902256	39898841	ENSG00000116990.10	-	protein_coding	KNOWN	MYCL	4	3	0.579856
chr1	39897745	39899098	39898421	ENSG00000236546.1	+	antisense	KNOWN	RP1-118J21.5	1	2	0.579856
chr1	39944890	39944998	39944944	ENSG00000207356.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.817629
chr1	39955112	39969968	39962540	ENSG00000168389.17	+	protein_coding	KNOWN	MFSD2A	10	14	0.463248
chr1	39962680	39963404	39963042	ENSG00000228477.1	+	processed_pseudogene	KNOWN	RP3-342P20.2	1	1	0.463248
chr1	40040233	40072649	40056441	ENSG00000131236.16	+	protein_coding	KNOWN	CAP1	19	13	0.541032
chr1	40072705	40097703	40085204	ENSG00000131238.16	-	protein_coding	KNOWN	PPT1	10	10	0.369981
chr1	40132764	40133448	40133106	ENSG00000226745.2	+	processed_pseudogene	KNOWN	RP11-115D7.3	1	1	0.206249
chr1	40161373	40240921	40201147	ENSG00000117000.8	+	protein_coding	KNOWN	RLF	1	8	0.272893
chr1	40177843	40177949	40177896	ENSG00000207508.1	+	snRNA	KNOWN	RNU6-1237P	1	1	0.514524
chr1	40245947	40251691	40248819	ENSG00000188800.5	+	protein_coding	KNOWN	TMCO2	2	3	0.550236
chr1	40256427	40257967	40257197	ENSG00000259943.1	-	antisense	KNOWN	RP1-39G22.7	1	1	0.665320
chr1	40258107	40294184	40276145	ENSG00000084073.8	+	protein_coding	KNOWN	ZMPSTE24	4	10	0.394022
chr1	40262672	40262984	40262828	ENSG00000231296.1	-	processed_pseudogene	KNOWN	RP1-39G22.4	1	1	0.665320
chr1	40300487	40317816	40309151	ENSG00000049089.13	-	protein_coding	KNOWN	COL9A2	11	32	0.511620
chr1	40333078	40333557	40333317	ENSG00000227311.3	-	processed_pseudogene	KNOWN	RP1-228H13.1	1	1	0.547671
chr1	40344850	40423326	40384088	ENSG00000084070.11	+	protein_coding	KNOWN	SMAP2	6	10	0.184129
chr1	40364766	40365183	40364974	ENSG00000213172.3	+	processed_pseudogene	KNOWN	RP1-228H13.2	1	1	0.145290
chr1	40450102	40463718	40456910	ENSG00000187801.14	+	protein_coding	KNOWN	ZFP69B	4	6	0.053518
chr1	40464319	40466767	40465543	ENSG00000260920.2	+	sense_overlapping	KNOWN	RP1-228H13.5	1	1	0.053518
chr1	40473055	40474059	40473557	ENSG00000279667.1	+	TEC	KNOWN	RP11-656D10.7	1	1	0.052246
chr1	40477215	40496343	40486779	ENSG00000187815.9	+	protein_coding	KNOWN	ZFP69	3	6	0.109547
chr1	40493157	40508661	40500909	ENSG00000238287.1	-	antisense	KNOWN	RP11-656D10.3	1	2	0.225017
chr1	40508741	40516556	40512648	ENSG00000164002.11	+	protein_coding	KNOWN	EXO5	10	4	0.166043
chr1	40514461	40515057	40514759	ENSG00000227278.1	-	antisense	KNOWN	RP11-656D10.5	1	2	0.154728
chr1	40515754	40517174	40516464	ENSG00000238186.1	-	antisense	KNOWN	RP11-656D10.6	1	2	0.154728
chr1	40531561	40548169	40539865	ENSG00000117010.15	+	protein_coding	KNOWN	ZNF684	6	5	0.355026
chr1	40563534	40563659	40563596	ENSG00000236505.1	+	unprocessed_pseudogene	KNOWN	RP1-63P18.2	1	1	0.110139
chr1	40593633	40594353	40593993	ENSG00000233910.1	-	processed_pseudogene	KNOWN	GTF2F2P2	1	1	0.213982
chr1	40620679	40665657	40643168	ENSG00000117016.9	-	protein_coding	KNOWN	RIMS3	2	8	0.429449
chr1	40669089	40687588	40678338	ENSG00000237899.1	-	lincRNA	KNOWN	RP4-739H11.3	1	5	0.324196
chr1	40690380	40692066	40691223	ENSG00000272145.1	-	antisense	KNOWN	NFYC-AS1	1	1	0.353619
chr1	40691570	40771603	40731586	ENSG00000066136.19	+	protein_coding	KNOWN	NFYC	25	15	0.308245
chr1	40754351	40754463	40754407	ENSG00000198974.2	+	miRNA	KNOWN	MIR30E	1	1	0.301663
chr1	40757284	40757372	40757328	ENSG00000207962.1	+	miRNA	KNOWN	MIR30C1	1	1	0.301663
chr1	40784012	40840452	40812232	ENSG00000117013.14	+	protein_coding	KNOWN	KCNQ4	4	14	0.754832
chr1	40804846	40805141	40804993	ENSG00000264582.2	+	misc_RNA	KNOWN	RN7SL326P	1	1	0.858035
chr1	40861051	40862366	40861708	ENSG00000179862.6	-	protein_coding	KNOWN	CITED4	1	1	0.348848
chr1	40863914	40876670	40870292	ENSG00000229528.1	+	antisense	KNOWN	RP5-1066H13.4	1	3	0.365201
chr1	40938104	40939763	40938933	ENSG00000228940.1	-	unprocessed_pseudogene	KNOWN	RP11-348A7.1	1	3	0.977708
chr1	40939661	40939767	40939714	ENSG00000273910.1	+	miRNA	NOVEL	AL391730.1	1	1	0.977708
chr1	40942251	40942515	40942383	ENSG00000233118.2	-	processed_pseudogene	KNOWN	UBE2V1P8	1	1	0.977708
chr1	40979335	41012565	40995950	ENSG00000171793.13	+	protein_coding	KNOWN	CTPS1	12	19	0.550193
chr1	40984853	40984919	40984886	ENSG00000281712.1	-	miRNA	NOVEL	AL391730.2	1	1	0.463961
chr1	41014590	41043890	41029240	ENSG00000281207.1	+	antisense	KNOWN	SLFNL1-AS1	1	4	0.480949
chr1	41015597	41023237	41019417	ENSG00000171790.15	-	protein_coding	KNOWN	SLFNL1	5	6	0.503306
chr1	41027200	41242154	41134677	ENSG00000010803.16	-	protein_coding	KNOWN	SCMH1	17	16	0.185833
chr1	41098638	41099136	41098887	ENSG00000215893.3	+	processed_pseudogene	KNOWN	RPL23AP17	1	1	0.118144
chr1	41242373	41284861	41263617	ENSG00000235358.1	+	lincRNA	KNOWN	RP11-399E6.1	3	3	0.368516
chr1	41264550	41264862	41264706	ENSG00000213987.4	-	processed_pseudogene	KNOWN	RP11-399E6.2	1	1	0.373086
chr1	41332111	41332244	41332177	ENSG00000281479.1	+	miRNA	NOVEL	AC093151.2	1	1	0.659032
chr1	41361922	41383590	41372756	ENSG00000204060.5	+	protein_coding	KNOWN	FOXO6	2	3	0.750462
chr1	41375004	41375669	41375336	ENSG00000229901.1	-	antisense	KNOWN	RP11-399E6.4	1	2	0.915466
chr1	41466937	41467028	41466982	ENSG00000252563.1	-	rRNA	KNOWN	RNA5SP45	1	1	0.535598
chr1	41478775	41484673	41481724	ENSG00000127129.9	-	protein_coding	KNOWN	EDN2	5	5	0.800294
chr1	41506365	42035925	41771145	ENSG00000127124.13	-	protein_coding	KNOWN	HIVEP3	7	9	0.422695
chr1	41535443	41535868	41535655	ENSG00000230881.1	+	antisense	KNOWN	RP11-486B10.3	1	2	0.705575
chr1	41542069	41544310	41543189	ENSG00000230638.4	+	processed_pseudogene	KNOWN	RP11-486B10.4	1	1	0.705575
chr1	41759141	41759227	41759184	ENSG00000264896.1	+	miRNA	NOVEL	AL451006.1	1	1	0.452874
chr1	42040597	42041729	42041163	ENSG00000227538.1	+	processed_pseudogene	KNOWN	HNRNPFP1	1	1	0.148575
chr1	42140635	42141391	42141013	ENSG00000228776.2	+	processed_pseudogene	KNOWN	RP11-319C21.1	1	2	-0.028302
chr1	42153421	42155824	42154622	ENSG00000044012.3	+	protein_coding	KNOWN	GUCA2B	1	3	0.412392
chr1	42162691	42164718	42163704	ENSG00000197273.3	-	protein_coding	KNOWN	GUCA2A	1	3	0.412392
chr1	42176539	42335877	42256208	ENSG00000198815.8	-	protein_coding	KNOWN	FOXJ3	9	15	-0.006254
chr1	42335386	42338376	42336881	ENSG00000227527.2	-	sense_overlapping	KNOWN	RP11-223A3.1	1	2	-0.036523
chr1	42380795	42422578	42401686	ENSG00000177181.14	+	protein_coding	KNOWN	RIMKLA	2	5	0.023344
chr1	42412398	42412794	42412596	ENSG00000235002.1	-	processed_pseudogene	KNOWN	RP11-157D18.2	1	1	0.176654
chr1	42430329	42456267	42443298	ENSG00000066185.12	-	protein_coding	KNOWN	ZMYND12	4	8	0.168409
chr1	42456117	42473385	42464751	ENSG00000127125.8	+	protein_coding	KNOWN	PPCS	8	3	0.231168
chr1	42463330	42654664	42558997	ENSG00000186409.14	+	protein_coding	KNOWN	CCDC30	14	23	-0.123619
chr1	42491739	42492493	42492116	ENSG00000230116.1	+	processed_pseudogene	KNOWN	RP11-163G10.2	1	1	-0.372219
chr1	42500205	42500339	42500272	ENSG00000236876.3	-	processed_pseudogene	KNOWN	TMSB4XP1	1	1	-0.372219
chr1	42569033	42569139	42569086	ENSG00000200254.1	+	snRNA	KNOWN	RNU6-536P	1	1	-0.045512
chr1	42570970	42571390	42571180	ENSG00000236180.2	+	processed_pseudogene	KNOWN	RP11-163G10.4	1	1	-0.155446
chr1	42658425	42676758	42667591	ENSG00000171960.10	+	protein_coding	KNOWN	PPIH	6	10	-0.051666
chr1	42678735	42681659	42680197	ENSG00000234917.2	+	lincRNA	KNOWN	RP5-994D16.3	1	2	0.262792
chr1	42682427	42702349	42692388	ENSG00000065978.17	+	protein_coding	KNOWN	YBX1	5	16	0.234279
chr1	42733093	42740254	42736673	ENSG00000164007.10	-	protein_coding	KNOWN	CLDN19	3	5	0.339513
chr1	42746335	42767084	42756709	ENSG00000117385.15	-	protein_coding	KNOWN	P3H1	14	15	0.519360
chr1	42767269	42794493	42780881	ENSG00000164008.13	+	protein_coding	KNOWN	C1orf50	5	6	0.452724
chr1	42775813	42776790	42776301	ENSG00000228452.1	-	antisense	KNOWN	RP5-994D16.9	1	2	0.435476
chr1	42787990	42798230	42793110	ENSG00000274386.4	+	lincRNA	KNOWN	RP5-994D16.11	4	7	0.459670
chr1	42807052	42817252	42812152	ENSG00000177868.11	-	protein_coding	KNOWN	SVBP	3	3	0.379984
chr1	42817124	42844989	42831056	ENSG00000164010.13	+	protein_coding	KNOWN	ERMAP	5	12	0.394284
chr1	42834681	42846422	42840551	ENSG00000228192.7	-	antisense	KNOWN	RP11-342M1.3	4	5	0.436437
chr1	42846573	42852477	42849525	ENSG00000164011.17	+	protein_coding	KNOWN	ZNF691	8	5	0.443309
chr1	42886597	42888767	42887682	ENSG00000233708.1	-	processed_pseudogene	KNOWN	RP11-342M1.7	1	5	0.137795
chr1	42891094	42892430	42891762	ENSG00000237090.1	-	processed_pseudogene	KNOWN	RP11-342M1.6	1	2	0.189688
chr1	42903232	42903912	42903572	ENSG00000225099.1	+	processed_pseudogene	KNOWN	ATP6V1E1P1	1	1	0.189688
chr1	42925375	42959173	42942274	ENSG00000117394.19	-	protein_coding	KNOWN	SLC2A1	11	10	0.846334
chr1	42959049	42983358	42971203	ENSG00000227533.5	+	lincRNA	KNOWN	SLC2A1-AS1	2	4	0.759513
chr1	42991438	42991544	42991491	ENSG00000207256.1	+	snRNA	KNOWN	RNU6-880P	1	1	0.608390
chr1	43104086	43104497	43104291	ENSG00000277513.1	+	processed_pseudogene	KNOWN	RP3-393B19.1	1	1	-0.020902
chr1	43145153	43156396	43150774	ENSG00000186973.10	+	protein_coding	KNOWN	FAM183A	6	4	0.301697
chr1	43164175	43270936	43217555	ENSG00000117395.10	-	protein_coding	KNOWN	EBNA1BP2	9	10	0.474777
chr1	43172149	43254358	43213253	ENSG00000243710.7	+	protein_coding	KNOWN	CFAP57	8	24	0.492443
chr1	43196417	43196536	43196476	ENSG00000199240.1	+	rRNA	KNOWN	RNA5SP46	1	1	0.550577
chr1	43269994	43274002	43271998	ENSG00000179178.10	+	protein_coding	KNOWN	TMEM125	4	4	0.923610
chr1	43281883	43285617	43283750	ENSG00000253313.5	-	protein_coding	KNOWN	C1orf210	2	3	0.924150
chr1	43300993	43323108	43312050	ENSG00000066056.13	+	protein_coding	KNOWN	TIE1	10	23	0.923650
chr1	43337807	43352772	43345289	ENSG00000117400.14	+	protein_coding	KNOWN	MPL	3	12	0.747234
chr1	43354684	43358658	43356671	ENSG00000234694.1	-	antisense	KNOWN	RP1-92O14.3	1	3	0.801045
chr1	43358955	43363203	43361079	ENSG00000117399.13	+	protein_coding	KNOWN	CDC20	4	11	0.801045
chr1	43363397	43368074	43365735	ENSG00000066322.12	-	protein_coding	KNOWN	ELOVL1	16	9	0.801045
chr1	43364648	43364715	43364681	ENSG00000277622.1	-	miRNA	KNOWN	MIR6734	1	1	0.801045
chr1	43383917	43389808	43386862	ENSG00000159479.16	-	protein_coding	KNOWN	MED8	5	8	1.063503
chr1	43385113	43389155	43387134	ENSG00000229431.1	+	antisense	KNOWN	RP1-92O14.6	1	4	1.063503
chr1	43389882	43452650	43421266	ENSG00000198198.14	+	protein_coding	KNOWN	SZT2	10	72	1.004969
chr1	43447776	43448644	43448210	ENSG00000229372.1	-	antisense	KNOWN	SZT2-AS1	1	2	1.030591
chr1	43448539	43448611	43448575	ENSG00000274975.1	+	miRNA	KNOWN	MIR6735	1	1	1.030591
chr1	43451003	43453989	43452496	ENSG00000178922.16	-	protein_coding	KNOWN	HYI	13	9	1.245177
chr1	43453927	43456995	43455461	ENSG00000229348.1	+	antisense	KNOWN	HYI-AS1	1	2	1.245177
chr1	43525187	43623666	43574426	ENSG00000142949.16	+	protein_coding	KNOWN	PTPRF	16	34	1.080110
chr1	43650158	43705515	43677836	ENSG00000066135.12	+	protein_coding	KNOWN	KDM4A	5	22	0.939912
chr1	43699765	43708138	43703951	ENSG00000236200.5	-	antisense	KNOWN	KDM4A-AS1	5	5	0.822602
chr1	43705824	43931165	43818494	ENSG00000126091.19	+	protein_coding	KNOWN	ST3GAL3	39	13	0.656591
chr1	43709392	43727343	43718367	ENSG00000229444.1	-	antisense	KNOWN	RP11-184I16.4	1	4	0.895432
chr1	43743471	43743741	43743606	ENSG00000233674.2	+	processed_pseudogene	KNOWN	RP11-184I16.3	1	1	0.610777
chr1	43850300	43851611	43850955	ENSG00000224751.2	-	processed_pseudogene	KNOWN	SHMT1P1	1	1	0.780048
chr1	43933320	43937241	43935280	ENSG00000117407.16	+	protein_coding	KNOWN	ARTN	11	5	1.197602
chr1	43944370	43946551	43945460	ENSG00000237950.1	-	antisense	KNOWN	RP11-7O11.3	3	3	1.197602
chr1	43946939	43968022	43957480	ENSG00000117408.10	+	protein_coding	KNOWN	IPO13	7	20	1.137774
chr1	43970000	43973369	43971684	ENSG00000132768.13	+	protein_coding	KNOWN	DPH2	17	6	1.290359
chr1	43974487	43978295	43976391	ENSG00000117410.13	+	protein_coding	KNOWN	ATP6V0B	13	8	1.290359
chr1	43978943	43991170	43985056	ENSG00000117411.16	+	protein_coding	KNOWN	B4GALT2	8	7	1.285207
chr1	43991359	43996528	43993943	ENSG00000159214.12	+	protein_coding	KNOWN	CCDC24	11	9	1.236567
chr1	43991500	44031467	44011483	ENSG00000196517.11	-	protein_coding	KNOWN	SLC6A9	11	14	1.095255
chr1	44030443	44115913	44073178	ENSG00000230615.6	+	lincRNA	KNOWN	RP5-1198O20.4	23	7	0.680053
chr1	44087958	44088477	44088217	ENSG00000227163.2	-	processed_pseudogene	KNOWN	RP5-1198O20.5	1	1	0.606565
chr1	44103306	44104703	44104004	ENSG00000271647.1	-	processed_pseudogene	KNOWN	KRT8P47	1	1	0.407194
chr1	44103945	44104079	44104012	ENSG00000281534.1	+	miRNA	NOVEL	AL139220.1	1	1	0.407194
chr1	44117098	44117397	44117247	ENSG00000239560.3	-	misc_RNA	KNOWN	RN7SL479P	1	1	0.461226
chr1	44118850	44135140	44126995	ENSG00000171872.4	+	protein_coding	KNOWN	KLF17	2	4	0.475062
chr1	44122153	44122512	44122332	ENSG00000233514.1	-	processed_pseudogene	KNOWN	RP11-570P14.1	1	1	0.461226
chr1	44137821	44141631	44139726	ENSG00000283039.1	-	protein_coding	KNOWN	KLF18	1	2	0.505068
chr1	44150594	44151753	44151173	ENSG00000226804.4	-	processed_pseudogene	KNOWN	RP4-675G8.3	1	1	0.456480
chr1	44153385	44153480	44153432	ENSG00000200171.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.456480
chr1	44155028	44155301	44155164	ENSG00000238037.1	-	processed_pseudogene	KNOWN	OOSP1P1	1	1	0.456480
chr1	44172506	44172719	44172612	ENSG00000227994.1	-	processed_pseudogene	KNOWN	RP5-891H21.1	1	1	0.420179
chr1	44187943	44189049	44188496	ENSG00000271329.1	-	processed_pseudogene	KNOWN	RP5-891H21.5	1	2	0.420179
chr1	44213455	44220681	44217068	ENSG00000178028.13	+	protein_coding	KNOWN	DMAP1	15	11	0.404582
chr1	44221070	44355260	44288165	ENSG00000117419.14	-	protein_coding	KNOWN	ERI3	9	9	0.626701
chr1	44243408	44244273	44243840	ENSG00000233602.1	-	sense_intronic	KNOWN	ERI3-IT1	1	2	0.811884
chr1	44333105	44333178	44333141	ENSG00000252146.1	-	miRNA	NOVEL	AL390776.1	1	1	0.518434
chr1	44390722	44390823	44390772	ENSG00000199385.1	+	snRNA	KNOWN	RNU6-369P	1	1	0.115839
chr1	44405194	44651724	44528459	ENSG00000187147.17	+	protein_coding	KNOWN	RNF220	18	16	0.440930
chr1	44545493	44545552	44545522	ENSG00000263381.1	+	miRNA	KNOWN	MIR5584	1	1	0.558230
chr1	44635238	44674555	44654896	ENSG00000126106.13	-	protein_coding	KNOWN	TMEM53	9	5	0.651904
chr1	44674692	44725591	44700141	ENSG00000198520.10	+	protein_coding	KNOWN	C1orf228	20	13	0.642181
chr1	44721786	44721902	44721844	ENSG00000199377.1	-	snRNA	KNOWN	RNU5F-1	1	1	0.625907
chr1	44731055	44731170	44731112	ENSG00000200169.1	-	snRNA	KNOWN	RNU5D-1	1	1	1.142976
chr1	44739818	44767767	44753792	ENSG00000142945.12	+	protein_coding	KNOWN	KIF2C	8	21	1.048309
chr1	44759037	44775810	44767423	ENSG00000225721.5	-	antisense	KNOWN	RP11-269F19.2	2	3	0.924424
chr1	44775251	44778779	44777015	ENSG00000142937.11	+	protein_coding	KNOWN	RPS8	8	6	0.793051
chr1	44775864	44775943	44775903	ENSG00000264294.1	+	snoRNA	KNOWN	SNORD55	1	1	0.793051
chr1	44776490	44776593	44776541	ENSG00000200913.1	+	snoRNA	KNOWN	SNORD46	1	1	0.793051
chr1	44777843	44777912	44777877	ENSG00000202031.1	+	snoRNA	KNOWN	SNORD38A	1	1	0.793051
chr1	44778390	44778456	44778423	ENSG00000207421.1	+	snoRNA	KNOWN	SNORD38B	1	1	0.793051
chr1	44778390	44778458	44778424	ENSG00000281859.1	+	snoRNA	KNOWN	SNORD38B	1	1	0.793051
chr1	44780331	44780715	44780523	ENSG00000234093.3	-	processed_pseudogene	KNOWN	RPS15AP11	1	1	0.793051
chr1	44783585	44787705	44785645	ENSG00000142959.4	-	protein_coding	KNOWN	BEST4	1	9	0.793051
chr1	44800225	44805990	44803107	ENSG00000173846.12	+	protein_coding	KNOWN	PLK3	7	15	0.947175
chr1	44805913	44806675	44806294	ENSG00000188396.3	-	protein_coding	KNOWN	TCTEX1D4	1	1	0.947175
chr1	44808482	44815585	44812033	ENSG00000222009.8	+	protein_coding	KNOWN	BTBD19	9	8	1.252568
chr1	44819844	44843063	44831453	ENSG00000117425.13	-	protein_coding	KNOWN	PTCH2	3	23	1.115102
chr1	44819883	44819997	44819940	ENSG00000202444.1	-	snRNA	KNOWN	RNU5E-6P	1	1	1.335504
chr1	44843921	44844082	44844001	ENSG00000226499.1	-	processed_pseudogene	KNOWN	RP5-882O7.1	1	1	0.943778
chr1	44850522	44986722	44918622	ENSG00000070785.16	-	protein_coding	KNOWN	EIF2B3	10	12	0.474381
chr1	44913068	44913172	44913120	ENSG00000266294.1	-	miRNA	NOVEL	AL136380.1	1	1	0.333000
chr1	44932323	44932431	44932377	ENSG00000253039.1	+	rRNA	KNOWN	RNA5SP47	1	1	0.314384
chr1	44958557	44959395	44958976	ENSG00000229815.1	+	processed_pseudogene	KNOWN	CCNB1IP1P1	1	1	0.325664
chr1	44988234	44988725	44988479	ENSG00000232369.1	-	processed_pseudogene	KNOWN	RP5-882O7.4	1	1	0.717433
chr1	44988705	44991834	44990269	ENSG00000268949.1	-	processed_pseudogene	KNOWN	MRPS17P1	1	1	0.748298
chr1	45002540	45011329	45006934	ENSG00000126107.14	-	protein_coding	KNOWN	HECTD3	7	21	0.786774
chr1	45012147	45015575	45013861	ENSG00000126088.12	+	protein_coding	KNOWN	UROD	20	10	0.880488
chr1	45016399	45306209	45161304	ENSG00000162415.6	-	protein_coding	KNOWN	ZSWIM5	2	14	0.078433
chr1	45069977	45070429	45070203	ENSG00000234315.1	-	processed_pseudogene	KNOWN	OSTCP5	1	1	-0.142084
chr1	45232218	45232307	45232262	ENSG00000221707.2	-	miRNA	NOVEL	AL592294.1	1	1	0.216883
chr1	45303910	45305619	45304764	ENSG00000281912.1	+	lincRNA	KNOWN	LINC01144	1	1	0.375490
chr1	45326905	45328533	45327719	ENSG00000186603.5	+	protein_coding	KNOWN	HPDL	1	1	0.285633
chr1	45329163	45340470	45334816	ENSG00000132781.17	-	protein_coding	KNOWN	MUTYH	39	17	0.624650
chr1	45339670	45343975	45341822	ENSG00000132773.11	+	protein_coding	KNOWN	TOE1	5	8	0.651717
chr1	45343883	45491166	45417524	ENSG00000070759.16	-	protein_coding	KNOWN	TESK2	4	11	0.182658
chr1	45415020	45415344	45415182	ENSG00000236872.1	+	processed_pseudogene	KNOWN	RP11-291L19.1	1	1	-0.260310
chr1	45493866	45500079	45496972	ENSG00000280670.2	-	protein_coding	KNOWN	CCDC163P	8	6	0.744893
chr1	45500053	45513382	45506717	ENSG00000132763.14	+	protein_coding	KNOWN	MMACHC	3	5	0.779681
chr1	45511036	45523047	45517041	ENSG00000117450.13	-	protein_coding	KNOWN	PRDX1	6	6	0.881957
chr1	45530927	45532139	45531533	ENSG00000234379.1	+	unprocessed_pseudogene	KNOWN	HMGB1P48	1	3	0.535862
chr1	45550543	45570049	45560296	ENSG00000117448.13	+	protein_coding	KNOWN	AKR1A1	14	10	0.620929
chr1	45580892	45580996	45580944	ENSG00000281133.1	-	pseudogene	NOVEL	AL355480.3	1	3	0.587029
chr1	45581219	45581321	45581270	ENSG00000280836.1	-	pseudogene	NOVEL	AL355480.1	1	2	0.587029
chr1	45583846	45618904	45601375	ENSG00000132780.16	+	protein_coding	KNOWN	NASP	25	15	0.450154
chr1	45592722	45592814	45592768	ENSG00000281112.1	-	pseudogene	NOVEL	AL355480.2	1	3	0.377987
chr1	45605657	45605730	45605693	ENSG00000281825.1	-	pseudogene	NOVEL	AL355480.4	1	2	0.377987
chr1	45620044	45624057	45622050	ENSG00000159588.14	-	protein_coding	KNOWN	CCDC17	9	13	0.517661
chr1	45627304	45688113	45657708	ENSG00000159592.10	-	protein_coding	KNOWN	GPBP1L1	14	13	0.449750
chr1	45645816	45646197	45646006	ENSG00000225447.1	-	processed_pseudogene	KNOWN	RPS15AP10	1	1	0.670695
chr1	45651039	45651826	45651432	ENSG00000234329.1	-	processed_pseudogene	KNOWN	RP11-767N6.2	1	1	0.184110
chr1	45687214	45694443	45690828	ENSG00000159596.6	+	protein_coding	KNOWN	TMEM69	2	3	0.550269
chr1	45694324	45750650	45722487	ENSG00000197429.10	-	protein_coding	KNOWN	IPP	4	10	0.426534
chr1	45694684	45697075	45695879	ENSG00000230896.1	-	sense_intronic	KNOWN	RP11-767N6.7	1	2	0.588668
chr1	45781277	45781957	45781617	ENSG00000236111.5	+	processed_pseudogene	KNOWN	RP11-630I5.1	1	1	0.514524
chr1	45786987	46036124	45911555	ENSG00000086015.20	+	protein_coding	KNOWN	MAST2	10	29	0.352508
chr1	45846994	45847594	45847294	ENSG00000232467.2	-	processed_pseudogene	KNOWN	TMA16P2	1	1	0.266388
chr1	46040140	46133036	46086588	ENSG00000117461.14	-	protein_coding	KNOWN	PIK3R3	7	11	0.353599
chr1	46043661	46176488	46110074	ENSG00000278139.1	-	protein_coding	KNOWN	PIK3R3	1	10	0.430516
chr1	46046818	46048368	46047593	ENSG00000226957.1	+	antisense	KNOWN	RP4-533D7.4	1	2	0.719599
chr1	46104950	46105175	46105062	ENSG00000233114.2	+	processed_pseudogene	KNOWN	RP4-533D7.3	1	1	0.175408
chr1	46134531	46139081	46136806	ENSG00000227857.2	+	antisense	KNOWN	RP4-533D7.5	1	2	0.596034
chr1	46175073	46185958	46180515	ENSG00000117472.9	+	protein_coding	KNOWN	TSPAN1	9	9	0.742602
chr1	46175486	46176478	46175982	ENSG00000250719.1	-	protein_coding	KNOWN	RP11-322N21.2	1	2	0.742602
chr1	46178715	46178821	46178768	ENSG00000281129.1	-	miRNA	NOVEL	AL672043.1	1	1	0.742602
chr1	46188682	46220305	46204493	ENSG00000085998.13	-	protein_coding	KNOWN	POMGNT1	10	23	0.917790
chr1	46203334	46221261	46212297	ENSG00000171357.5	+	protein_coding	KNOWN	LURAP1	1	2	0.915225
chr1	46247688	46278473	46263080	ENSG00000085999.11	+	protein_coding	KNOWN	RAD54L	12	19	0.762847
chr1	46261196	46303608	46282402	ENSG00000132128.16	-	protein_coding	KNOWN	LRRC41	8	10	0.620149
chr1	46303631	46316776	46310203	ENSG00000173660.11	+	protein_coding	KNOWN	UQCRH	5	5	0.776247
chr1	46340177	46365152	46352664	ENSG00000117481.10	+	protein_coding	KNOWN	NSUN4	9	6	0.544422
chr1	46370586	46370955	46370770	ENSG00000225779.1	+	processed_pseudogene	KNOWN	RP4-603I14.3	1	1	0.078816
chr1	46394265	46413848	46404056	ENSG00000117480.15	+	protein_coding	KNOWN	FAAH	6	15	0.417737
chr1	46432129	46482493	46457311	ENSG00000232022.7	+	transcribed_unprocessed_pseudogene	KNOWN	FAAHP1	7	12	0.615470
chr1	46435525	46435607	46435566	ENSG00000273854.1	-	miRNA	NOVEL	AL137797.1	1	1	0.435026
chr1	46446673	46451281	46448977	ENSG00000224863.2	-	processed_transcript	KNOWN	LINC01398	2	4	0.544622
chr1	46506996	46514226	46510611	ENSG00000197587.10	+	protein_coding	KNOWN	DMBX1	2	4	0.380400
chr1	46532166	46533614	46532890	ENSG00000282881.1	-	protein_coding	KNOWN	RP11-49P4.7	1	1	0.539451
chr1	46538696	46570255	46554475	ENSG00000269956.1	+	antisense	KNOWN	MKNK1-AS1	1	8	0.668306
chr1	46545644	46551527	46548585	ENSG00000162456.9	-	protein_coding	KNOWN	KNCN	4	4	0.592412
chr1	46557408	46616843	46587125	ENSG00000079277.19	-	protein_coding	KNOWN	MKNK1	28	14	0.559112
chr1	46607715	46616891	46612303	ENSG00000142961.14	-	protein_coding	KNOWN	MOB3C	4	4	0.427181
chr1	46632737	46673867	46653302	ENSG00000123472.12	-	protein_coding	KNOWN	ATPAF1	14	10	0.244169
chr1	46665910	46666375	46666142	ENSG00000233647.2	-	processed_pseudogene	KNOWN	NENFP1	1	1	0.187675
chr1	46668855	46673594	46671224	ENSG00000186118.8	+	protein_coding	KNOWN	TEX38	4	2	0.138377
chr1	46674036	46692098	46683067	ENSG00000228237.5	+	antisense	KNOWN	EFCAB14-AS1	2	4	0.114117
chr1	46675159	46719064	46697111	ENSG00000159658.10	-	protein_coding	KNOWN	EFCAB14	6	11	0.114132
chr1	46742329	46743133	46742731	ENSG00000236476.2	+	processed_pseudogene	KNOWN	RP11-8J9.5	1	1	0.083530
chr1	46757838	46819413	46788625	ENSG00000142973.12	+	protein_coding	KNOWN	CYP4B1	14	13	-0.045125
chr1	46843095	46900437	46871766	ENSG00000154198.14	-	transcribed_unprocessed_pseudogene	KNOWN	CYP4Z2P	2	12	-0.220340
chr1	46891639	46892830	46892234	ENSG00000238145.2	+	processed_pseudogene	KNOWN	RP11-346M5.1	1	1	-0.401548
chr1	46929177	46941484	46935330	ENSG00000187048.12	-	protein_coding	KNOWN	CYP4A11	9	13	-0.007462
chr1	46967679	46967874	46967776	ENSG00000259832.1	-	unprocessed_pseudogene	KNOWN	CYP4A26P	1	1	-0.143298
chr1	46994382	46994502	46994442	ENSG00000261196.1	-	unprocessed_pseudogene	KNOWN	CYP4A43P	1	1	-0.290342
chr1	47000898	47001087	47000992	ENSG00000261593.1	-	unprocessed_pseudogene	KNOWN	CYP4A27P	1	1	-0.290342
chr1	47002995	47003148	47003071	ENSG00000261290.1	-	unprocessed_pseudogene	KNOWN	CYP4A44P	1	1	-0.290342
chr1	47023568	47050751	47037159	ENSG00000186377.7	+	protein_coding	KNOWN	CYP4X1	2	12	-0.051952
chr1	47067488	47118319	47092903	ENSG00000186160.4	+	protein_coding	KNOWN	CYP4Z1	2	12	-0.295523
chr1	47074778	47075979	47075378	ENSG00000225154.2	-	processed_pseudogene	KNOWN	RP11-184J23.2	1	1	-0.365481
chr1	47096653	47179271	47137962	ENSG00000225506.2	-	lincRNA	KNOWN	CYP4A22-AS1	1	4	-0.224756
chr1	47137435	47149741	47143588	ENSG00000162365.11	+	protein_coding	KNOWN	CYP4A22	7	13	-0.212863
chr1	47164510	47165920	47165215	ENSG00000225514.1	-	transcribed_processed_pseudogene	KNOWN	MTND1P34	1	2	-0.321146
chr1	47179250	47180339	47179794	ENSG00000224805.2	+	antisense	KNOWN	LINC00853	1	2	-0.180088
chr1	47183593	47191044	47187318	ENSG00000162366.7	-	protein_coding	KNOWN	PDZK1IP1	4	5	-0.112057
chr1	47216290	47232220	47224255	ENSG00000162367.11	-	protein_coding	KNOWN	TAL1	6	5	-0.051689
chr1	47225797	47230750	47228273	ENSG00000226252.1	+	antisense	KNOWN	RP1-18D14.7	1	2	-0.047404
chr1	47250139	47314147	47282143	ENSG00000123473.15	-	protein_coding	KNOWN	STIL	9	19	0.125672
chr1	47333797	47378839	47356318	ENSG00000162368.13	+	protein_coding	KNOWN	CMPK1	5	6	0.303048
chr1	47380928	47408477	47394702	ENSG00000225762.1	-	antisense	KNOWN	LINC01389	1	3	0.398147
chr1	47416072	47418052	47417062	ENSG00000186790.5	+	protein_coding	KNOWN	FOXE3	1	1	0.390171
chr1	47432133	47434641	47433387	ENSG00000237424.1	-	antisense	KNOWN	FOXD2-AS1	1	1	0.509077
chr1	47436017	47440691	47438354	ENSG00000186564.5	+	protein_coding	KNOWN	FOXD2	1	1	0.509077
chr1	47483698	47484162	47483930	ENSG00000271355.1	-	processed_pseudogene	KNOWN	RP4-666O22.3	1	1	-0.085165
chr1	47497894	47498341	47498117	ENSG00000229554.2	-	processed_pseudogene	KNOWN	RPL21P24	1	1	0.029595
chr1	47502504	47502639	47502571	ENSG00000221346.1	+	miRNA	NOVEL	AL356458.1	1	1	0.029595
chr1	47550196	47550753	47550474	ENSG00000227883.1	+	processed_pseudogene	KNOWN	ATP6V0E1P4	1	2	0.071528
chr1	47621093	47621177	47621135	ENSG00000221447.1	-	miRNA	NOVEL	AL591415.1	1	1	-0.469512
chr1	47688463	47703383	47695923	ENSG00000227947.1	+	lincRNA	KNOWN	RP11-543D5.1	1	3	0.053926
chr1	47760528	47996895	47878711	ENSG00000269113.3	-	protein_coding	KNOWN	TRABD2B	2	7	0.036088
chr1	47761132	47765547	47763339	ENSG00000223814.1	-	lincRNA	KNOWN	RP11-543D5.2	1	2	0.273018
chr1	47818066	47820237	47819151	ENSG00000225028.1	+	lincRNA	KNOWN	RP11-330M19.1	1	2	-0.103559
chr1	48050659	48091736	48071197	ENSG00000226133.6	+	lincRNA	KNOWN	RP4-683M8.2	3	6	0.076383
chr1	48078787	48082196	48080491	ENSG00000231413.1	-	lincRNA	KNOWN	RP11-193P11.3	1	2	0.245701
chr1	48089368	48089634	48089501	ENSG00000237180.1	+	processed_pseudogene	KNOWN	CYP46A4P	1	1	0.245701
chr1	48096092	48182428	48139260	ENSG00000242267.6	-	unitary_pseudogene	KNOWN	SKINTL	4	5	-0.283704
chr1	48102068	48104707	48103387	ENSG00000279096.1	+	protein_coding	KNOWN	AL356289.1	1	1	-0.191462
chr1	48172972	48206857	48189914	ENSG00000223720.2	+	lincRNA	KNOWN	RP5-1024N4.2	1	5	-0.286971
chr1	48222685	48248644	48235664	ENSG00000117834.12	+	protein_coding	KNOWN	SLC5A9	10	15	0.081579
chr1	48227888	48229561	48228724	ENSG00000272491.1	-	antisense	KNOWN	RP5-1024N4.4	1	1	-0.087117
chr1	48262230	48263179	48262704	ENSG00000279214.1	-	TEC	KNOWN	RP5-1024N4.5	1	1	-0.198350
chr1	48295372	48472208	48383790	ENSG00000132122.11	-	protein_coding	KNOWN	SPATA6	11	13	-0.440364
chr1	48325080	48326123	48325601	ENSG00000224986.2	-	processed_pseudogene	KNOWN	PPP1R8P1	1	1	-0.853560
chr1	48344209	48344315	48344262	ENSG00000206700.1	+	snRNA	KNOWN	RNU6-723P	1	1	-0.278846
chr1	48435967	48437223	48436595	ENSG00000235105.1	+	processed_pseudogene	KNOWN	RP11-329A14.1	1	1	-0.552913
chr1	48447936	48448042	48447989	ENSG00000223175.1	+	snRNA	KNOWN	RNU4-61P	1	1	-0.552913
chr1	48497263	48497736	48497499	ENSG00000232514.1	-	processed_pseudogene	KNOWN	RP11-329A14.2	1	1	0.021602
chr1	48532855	50023913	49278384	ENSG00000186094.16	-	protein_coding	KNOWN	AGBL4	6	14	-0.377909
chr1	48727523	48776969	48752246	ENSG00000162373.12	-	protein_coding	KNOWN	BEND5	6	6	-0.231979
chr1	49048316	49187585	49117950	ENSG00000229846.1	+	antisense	KNOWN	RP11-141A19.1	1	3	-0.308146
chr1	49257411	49269285	49263348	ENSG00000230114.1	+	antisense	KNOWN	RP11-141A19.2	1	4	-0.401048
chr1	49374201	49472085	49423143	ENSG00000225623.1	-	sense_intronic	KNOWN	AGBL4-IT1	1	4	-0.465345
chr1	49691262	49691523	49691392	ENSG00000237478.2	-	processed_pseudogene	KNOWN	RP5-926E3.1	1	1	-0.596547
chr1	49841821	49846400	49844110	ENSG00000215887.5	+	unprocessed_pseudogene	KNOWN	ZNF859P	1	3	-0.636936
chr1	49982215	49982295	49982255	ENSG00000221746.1	+	miRNA	NOVEL	AL645730.1	1	1	-0.458205
chr1	49994318	49996218	49995268	ENSG00000279324.1	+	TEC	KNOWN	RP11-93G23.2	1	1	-0.403966
chr1	50017092	50017503	50017297	ENSG00000233595.2	+	processed_pseudogene	KNOWN	MTND2P29	1	1	-0.448577
chr1	50048014	50203786	50125900	ENSG00000162374.16	+	protein_coding	KNOWN	ELAVL4	11	7	-0.277074
chr1	50114937	50115282	50115109	ENSG00000230828.1	+	processed_pseudogene	KNOWN	RP11-492I2.1	1	1	-0.383346
chr1	50174306	50175868	50175087	ENSG00000237337.1	-	antisense	KNOWN	RP11-567C20.2	1	2	-0.332696
chr1	50206084	50223127	50214605	ENSG00000233407.1	-	antisense	KNOWN	RP11-567C20.3	1	2	0.099640
chr1	50326131	50327007	50326569	ENSG00000234080.3	+	processed_pseudogene	KNOWN	RP11-183G22.1	1	1	0.091992
chr1	50398825	50399773	50399299	ENSG00000229316.1	-	processed_pseudogene	KNOWN	HMGB1P45	1	2	-0.136949
chr1	50405430	50406024	50405727	ENSG00000225671.2	-	processed_pseudogene	KNOWN	FCF1P6	1	1	-0.136949
chr1	50417550	50423500	50420525	ENSG00000142700.11	-	protein_coding	KNOWN	DMRTA2	2	3	-0.320203
chr1	50437028	50960263	50698645	ENSG00000185104.19	-	protein_coding	KNOWN	FAF1	5	19	-0.254336
chr1	50461469	50471150	50466309	ENSG00000225767.1	+	antisense	KNOWN	RP5-850O15.3	1	5	-0.017826
chr1	50499758	50499857	50499807	ENSG00000280887.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.512707
chr1	50582404	50582511	50582457	ENSG00000207194.1	+	snRNA	KNOWN	RNU6-1026P	1	1	-0.240907
chr1	50780340	50781150	50780745	ENSG00000230585.2	+	processed_pseudogene	KNOWN	PHBP12	1	1	-0.411775
chr1	50846468	50846837	50846652	ENSG00000237130.1	+	processed_pseudogene	KNOWN	MRPS6P2	1	1	-0.386929
chr1	50960745	50974633	50967689	ENSG00000123080.10	+	protein_coding	KNOWN	CDKN2C	3	4	0.144916
chr1	51059837	51059905	51059871	ENSG00000265538.1	+	miRNA	KNOWN	MIR4421	1	1	-0.204140
chr1	51060018	51060103	51060060	ENSG00000275816.1	+	miRNA	KNOWN	MIR6500	1	1	-0.204140
chr1	51102234	51148086	51125160	ENSG00000204006.8	+	protein_coding	KNOWN	C1orf185	4	5	-0.286388
chr1	51107222	51107331	51107276	ENSG00000200262.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.057234
chr1	51157788	51158471	51158129	ENSG00000213478.2	-	processed_pseudogene	KNOWN	CFL1P2	1	1	-0.274605
chr1	51188463	51188551	51188507	ENSG00000239101.1	+	miRNA	NOVEL	AL162430.1	1	1	-0.210332
chr1	51195095	51235096	51215095	ENSG00000203356.2	-	lincRNA	KNOWN	LINC01562	1	2	0.138583
chr1	51236271	51273455	51254863	ENSG00000123091.4	+	protein_coding	KNOWN	RNF11	3	3	0.278046
chr1	51250603	51251472	51251037	ENSG00000233406.5	-	processed_pseudogene	KNOWN	RP11-296A18.5	1	1	0.340905
chr1	51264916	51266074	51265495	ENSG00000236434.2	-	antisense	KNOWN	RP11-296A18.6	1	2	0.340905
chr1	51287258	51345116	51316187	ENSG00000085831.15	-	protein_coding	KNOWN	TTC39A	18	18	0.401589
chr1	51329654	51335324	51332489	ENSG00000261664.5	+	antisense	KNOWN	TTC39A-AS1	2	3	0.509548
chr1	51354263	51519328	51436795	ENSG00000085832.16	-	protein_coding	KNOWN	EPS15	9	25	0.010683
chr1	51372270	51373224	51372747	ENSG00000232027.2	+	processed_pseudogene	KNOWN	RP11-275F13.3	1	1	0.075216
chr1	51382308	51382414	51382361	ENSG00000206595.1	+	snRNA	KNOWN	RNU6-877P	1	1	0.075216
chr1	51461721	51463416	51462568	ENSG00000238140.1	+	antisense	KNOWN	RP11-253A20.1	1	2	0.057776
chr1	51518309	51561629	51539969	ENSG00000227070.1	+	antisense	KNOWN	RP11-191G24.1	2	3	0.118632
chr1	51538625	51538729	51538677	ENSG00000252032.1	-	snRNA	KNOWN	RNU6-1281P	1	1	0.053103
chr1	51561866	51594897	51578381	ENSG00000227742.1	-	unitary_pseudogene	KNOWN	CALR4P	1	7	0.279079
chr1	51577179	51798427	51687803	ENSG00000117859.18	+	protein_coding	KNOWN	OSBPL9	27	26	0.285824
chr1	51707138	51708137	51707637	ENSG00000236973.2	-	processed_pseudogene	KNOWN	GAPDHP51	1	1	0.282214
chr1	51709062	51709940	51709501	ENSG00000232846.1	+	processed_pseudogene	KNOWN	SLC25A6P3	1	1	0.282214
chr1	51724775	51724896	51724835	ENSG00000212624.1	-	snoRNA	NOVEL	SNORA26	1	1	0.319225
chr1	51789191	51878937	51834064	ENSG00000078618.19	-	protein_coding	KNOWN	NRD1	15	33	0.244191
chr1	51793934	51799154	51796544	ENSG00000266993.3	+	antisense	KNOWN	RP4-657D16.3	4	2	0.610612
chr1	51801028	51801307	51801167	ENSG00000272175.1	+	antisense	KNOWN	RP4-657D16.6	1	1	0.610612
chr1	51836341	51836410	51836375	ENSG00000212076.1	-	miRNA	KNOWN	MIR761	1	1	0.058439
chr1	51859778	51860135	51859956	ENSG00000230604.2	+	processed_pseudogene	KNOWN	TSEN15P2	1	1	0.417478
chr1	51900920	51900971	51900945	ENSG00000280742.1	-	miRNA	NOVEL	AL589663.1	1	1	0.382248
chr1	51907956	51990764	51949360	ENSG00000169213.6	-	protein_coding	KNOWN	RAB3B	1	5	0.405003
chr1	51973410	51973535	51973472	ENSG00000200839.1	+	rRNA	KNOWN	RNA5SP48	1	1	0.410521
chr1	51980473	51980814	51980643	ENSG00000229032.1	+	processed_pseudogene	KNOWN	RP11-91A18.1	1	1	0.410521
chr1	51995740	51996039	51995889	ENSG00000264613.2	+	misc_RNA	KNOWN	RN7SL290P	1	1	0.474239
chr1	52020131	52056171	52038151	ENSG00000117862.11	-	protein_coding	KNOWN	TXNDC12	5	8	0.244549
chr1	52032103	52033816	52032959	ENSG00000198841.3	-	protein_coding	KNOWN	KTI12	1	1	0.140627
chr1	52033391	52044279	52038835	ENSG00000223390.1	+	antisense	KNOWN	RP11-91A18.4	1	2	0.140627
chr1	52050918	52052683	52051800	ENSG00000228369.2	+	antisense	KNOWN	TXNDC12-AS1	1	3	0.342642
chr1	52056125	52090716	52073420	ENSG00000134717.17	+	protein_coding	KNOWN	BTF3L4	8	7	0.126430
chr1	52142094	52346686	52244390	ENSG00000157077.14	+	protein_coding	KNOWN	ZFYVE9	5	19	0.259004
chr1	52150104	52150419	52150261	ENSG00000241745.3	+	misc_RNA	KNOWN	RN7SL788P	1	1	0.395541
chr1	52150329	52150412	52150370	ENSG00000281172.1	+	miRNA	NOVEL	AL139156.1	1	1	0.395541
chr1	52160261	52160600	52160430	ENSG00000228407.2	-	processed_pseudogene	KNOWN	RP4-800M22.1	1	1	0.395541
chr1	52162186	52163026	52162606	ENSG00000223429.1	-	processed_pseudogene	KNOWN	RP4-800M22.2	1	1	0.395541
chr1	52179848	52180553	52180200	ENSG00000224255.2	+	processed_pseudogene	KNOWN	PDCL3P6	1	1	0.147033
chr1	52189916	52190309	52190112	ENSG00000236004.2	-	processed_pseudogene	KNOWN	RP4-800M22.4	1	1	0.129190
chr1	52252062	52252773	52252417	ENSG00000237663.2	-	processed_pseudogene	KNOWN	DNAJC19P7	1	2	0.241505
chr1	52253621	52254176	52253898	ENSG00000213735.2	+	processed_pseudogene	KNOWN	ANAPC10P1	1	1	0.241505
chr1	52345723	52366193	52355958	ENSG00000154222.14	-	protein_coding	KNOWN	CC2D1B	11	25	0.463924
chr1	52353487	52353877	52353682	ENSG00000272100.1	+	antisense	KNOWN	RP11-155O18.6	1	1	0.495714
chr1	52368677	52369244	52368960	ENSG00000224680.4	+	processed_pseudogene	KNOWN	PLA2G12AP1	1	1	0.495714
chr1	52372829	52404459	52388644	ENSG00000085840.12	-	protein_coding	KNOWN	ORC1	2	17	0.599058
chr1	52404564	52420839	52412701	ENSG00000134748.12	+	protein_coding	KNOWN	PRPF38A	3	10	0.411417
chr1	52408282	52553487	52480884	ENSG00000134744.13	-	protein_coding	KNOWN	ZCCHC11	21	30	0.082886
chr1	52554818	52555273	52555045	ENSG00000272371.1	+	lincRNA	KNOWN	RP11-25O10.2	1	1	0.218904
chr1	52573114	52573816	52573465	ENSG00000236290.1	+	processed_pseudogene	KNOWN	EEF1GP7	1	1	0.511145
chr1	52602372	52609051	52605711	ENSG00000116157.5	+	protein_coding	KNOWN	GPX7	2	3	0.004044
chr1	52633344	52669683	52651513	ENSG00000182183.14	+	protein_coding	KNOWN	FAM159A	4	6	0.439847
chr1	52684451	52698366	52691408	ENSG00000162377.5	-	protein_coding	KNOWN	COA7	2	3	0.507745
chr1	52709122	52709442	52709282	ENSG00000233664.1	+	processed_pseudogene	KNOWN	NDUFS5P3	1	1	0.548057
chr1	52714399	52714695	52714547	ENSG00000239640.3	+	misc_RNA	KNOWN	RN7SL62P	1	1	0.369727
chr1	52726467	52827342	52776904	ENSG00000162378.12	+	protein_coding	KNOWN	ZYG11B	2	14	0.251806
chr1	52754322	52754462	52754392	ENSG00000252018.1	+	snRNA	KNOWN	RNU2-30P	1	1	0.479653
chr1	52772194	52772648	52772421	ENSG00000228929.1	-	processed_pseudogene	KNOWN	RPS13P2	1	1	0.152292
chr1	52805108	52805212	52805160	ENSG00000206627.1	-	snRNA	KNOWN	RNU6-969P	1	1	0.177568
chr1	52842511	52894998	52868754	ENSG00000203995.9	+	protein_coding	KNOWN	ZYG11A	3	14	0.337791
chr1	52881216	52881730	52881473	ENSG00000242391.2	-	antisense	KNOWN	RP4-631H13.2	1	2	0.370147
chr1	52895910	52927212	52911561	ENSG00000121310.16	-	protein_coding	KNOWN	ECHDC2	26	13	0.214928
chr1	52920422	52920596	52920509	ENSG00000230953.2	+	processed_pseudogene	KNOWN	RP4-631H13.6	1	1	0.296350
chr1	52925249	52925423	52925336	ENSG00000231866.2	-	processed_pseudogene	KNOWN	RP4-631H13.4	1	1	0.296350
chr1	52927229	53051703	52989466	ENSG00000116171.16	+	protein_coding	KNOWN	SCP2	16	17	0.366320
chr1	52928674	52928772	52928723	ENSG00000264834.1	+	miRNA	KNOWN	MIR1273F	1	1	0.296350
chr1	52934930	52935017	52934973	ENSG00000266188.1	+	miRNA	KNOWN	MIR5095	1	1	0.404701
chr1	52940314	52940413	52940363	ENSG00000265815.1	+	miRNA	KNOWN	MIR1273G	1	1	0.404701
chr1	52943536	52943930	52943733	ENSG00000237279.2	-	processed_pseudogene	KNOWN	RP4-631H13.5	1	1	0.404701
chr1	52993201	52993702	52993451	ENSG00000236360.2	-	processed_pseudogene	KNOWN	RP11-334A14.2	1	1	0.355026
chr1	52994726	52996026	52995376	ENSG00000226147.1	+	processed_pseudogene	KNOWN	TUBBP10	1	1	0.355026
chr1	53053624	53054949	53054286	ENSG00000279054.1	-	protein_coding	KNOWN	AL445183.1	1	2	0.370592
chr1	53062052	53085502	53073777	ENSG00000174348.13	+	protein_coding	KNOWN	PODN	7	13	0.676905
chr1	53069938	53085502	53077720	ENSG00000232993.1	-	antisense	KNOWN	RP11-334A14.5	1	2	0.832108
chr1	53073110	53073389	53073249	ENSG00000227644.2	-	processed_pseudogene	KNOWN	HIGD1AP11	1	1	0.833924
chr1	53087179	53142632	53114905	ENSG00000162383.11	-	protein_coding	KNOWN	SLC1A7	6	11	0.751820
chr1	53114576	53118609	53116592	ENSG00000235563.1	+	antisense	KNOWN	RP11-334A14.8	1	2	0.704969
chr1	53180921	53186900	53183910	ENSG00000277397.1	+	unprocessed_pseudogene	KNOWN	RP5-1024G6.9	1	2	0.536294
chr1	53196429	53214197	53205313	ENSG00000157184.5	+	protein_coding	KNOWN	CPT2	2	5	0.270359
chr1	53209783	53213775	53211779	ENSG00000236723.2	-	antisense	KNOWN	RP5-1024G6.2	2	3	0.601653
chr1	53214099	53220617	53217358	ENSG00000162384.13	-	protein_coding	KNOWN	C1orf123	7	8	0.626914
chr1	53220663	53224253	53222458	ENSG00000259818.1	+	antisense	KNOWN	RP5-1024G6.7	1	1	0.626914
chr1	53226892	53238610	53232751	ENSG00000162385.10	-	protein_coding	KNOWN	MAGOH	4	5	0.406122
chr1	53238610	53242783	53240696	ENSG00000226754.1	+	antisense	KNOWN	RP5-1024G6.5	1	3	0.326457
chr1	53242364	53328070	53285217	ENSG00000157193.14	-	protein_coding	KNOWN	LRP8	13	20	0.486062
chr1	53267935	53268601	53268268	ENSG00000234578.1	+	antisense	KNOWN	RP4-784A16.1	1	2	0.291832
chr1	53288024	53289706	53288865	ENSG00000228838.1	+	antisense	KNOWN	RP4-784A16.2	1	2	0.442355
chr1	53291791	53292138	53291964	ENSG00000225030.1	-	sense_intronic	KNOWN	RP4-784A16.3	1	2	0.727117
chr1	53304536	53307462	53305999	ENSG00000232762.1	+	antisense	KNOWN	RP4-784A16.4	1	6	0.727117
chr1	53328233	53336509	53332371	ENSG00000225675.2	+	lincRNA	KNOWN	RP4-784A16.5	1	3	0.525040
chr1	53348488	53349233	53348860	ENSG00000226938.1	-	lincRNA	KNOWN	RP11-117D22.1	1	2	0.518257
chr1	53366668	53368245	53367456	ENSG00000230138.1	-	lincRNA	KNOWN	RP11-117D22.2	1	2	0.366167
chr1	53413149	53440020	53426584	ENSG00000236253.7	-	transcribed_processed_pseudogene	KNOWN	SLC25A3P1	6	3	0.557695
chr1	53459399	53467488	53463443	ENSG00000143006.7	+	protein_coding	KNOWN	DMRTB1	2	4	0.140572
chr1	53506237	53738106	53622171	ENSG00000174332.5	-	protein_coding	KNOWN	GLIS1	2	10	0.517131
chr1	53688749	53688812	53688780	ENSG00000239007.1	-	snRNA	KNOWN	RNU7-95P	1	1	0.438858
chr1	53765460	53838860	53802160	ENSG00000058804.11	-	protein_coding	KNOWN	NDC1	2	18	0.085268
chr1	53771018	53771153	53771085	ENSG00000201003.1	-	snoRNA	NOVEL	SNORA58	1	1	-0.060860
chr1	53841547	53841832	53841689	ENSG00000229687.2	+	processed_pseudogene	KNOWN	RP4-654H19.2	1	1	-0.099489
chr1	53851719	53889834	53870776	ENSG00000058799.13	-	protein_coding	KNOWN	YIPF1	8	11	0.023539
chr1	53891239	53911086	53901162	ENSG00000211452.10	+	protein_coding	KNOWN	DIO1	17	6	0.182366
chr1	53916574	53945929	53931251	ENSG00000081870.11	-	protein_coding	KNOWN	HSPB11	6	6	0.094412
chr1	53946077	53968168	53957122	ENSG00000116212.14	+	protein_coding	KNOWN	LRRC42	5	9	0.209317
chr1	53974969	53976031	53975500	ENSG00000219102.3	-	processed_pseudogene	KNOWN	HNRNPA3P12	1	1	0.327620
chr1	54007299	54018186	54012742	ENSG00000203985.10	-	protein_coding	KNOWN	LDLRAD1	4	6	0.478032
chr1	54026681	54053504	54040092	ENSG00000116209.11	-	protein_coding	KNOWN	TMEM59	9	8	0.231812
chr1	54033126	54034880	54034003	ENSG00000280378.1	-	TEC	KNOWN	RP4-758J24.6	1	1	0.168163
chr1	54053587	54112519	54083053	ENSG00000116205.10	+	protein_coding	KNOWN	TCEANC2	4	5	0.069450
chr1	54054079	54054154	54054116	ENSG00000264208.1	+	miRNA	KNOWN	MIR4781	1	1	0.278143
chr1	54089856	54090093	54089974	ENSG00000225183.1	+	processed_pseudogene	KNOWN	RP4-758J24.4	1	1	-0.031842
chr1	54099968	54100224	54100096	ENSG00000279049.1	-	pseudogene	NOVEL	AL353898.1	1	2	-0.108921
chr1	54133074	54153770	54143422	ENSG00000157211.10	-	protein_coding	KNOWN	CDCP2	2	4	0.366458
chr1	54138373	54142980	54140676	ENSG00000280425.1	+	TEC	KNOWN	RP11-446E24.3	1	1	0.353859
chr1	54141224	54200073	54170648	ENSG00000256407.1	-	protein_coding	KNOWN	RP11-446E24.4	2	8	0.493954
chr1	54172336	54200036	54186186	ENSG00000215883.9	-	protein_coding	KNOWN	CYB5RL	9	8	0.571558
chr1	54184041	54225464	54204752	ENSG00000116221.15	+	protein_coding	KNOWN	MRPL37	6	7	0.343062
chr1	54225432	54413479	54319455	ENSG00000157216.15	-	protein_coding	KNOWN	SSBP3	16	18	0.555523
chr1	54236440	54239063	54237751	ENSG00000198711.5	+	antisense	KNOWN	SSBP3-AS1	1	1	0.468759
chr1	54285405	54287371	54286388	ENSG00000225632.1	+	antisense	KNOWN	RP5-997D24.3	1	2	0.704023
chr1	54416256	54420860	54418558	ENSG00000232245.1	+	lincRNA	KNOWN	RP4-705F19.1	1	2	0.465145
chr1	54481504	54481566	54481535	ENSG00000281315.1	-	miRNA	NOVEL	AC099796.2	1	1	0.252846
chr1	54504668	54504770	54504719	ENSG00000265404.1	+	miRNA	NOVEL	AC099796.1	1	1	0.507029
chr1	54516412	54517259	54516835	ENSG00000235741.1	-	lincRNA	KNOWN	RP5-866L20.1	1	2	0.407194
chr1	54524824	54524931	54524877	ENSG00000237173.1	+	processed_pseudogene	KNOWN	RP5-866L20.2	1	1	0.407194
chr1	54536796	54537758	54537277	ENSG00000227453.1	+	processed_pseudogene	KNOWN	HNRNPA1P63	1	1	-0.122452
chr1	54542257	54639192	54590724	ENSG00000162390.17	+	protein_coding	KNOWN	ACOT11	5	17	0.458796
chr1	54609182	54623556	54616369	ENSG00000162391.11	-	protein_coding	KNOWN	FAM151A	2	8	0.547670
chr1	54621477	54628438	54624957	ENSG00000230728.1	-	sense_overlapping	KNOWN	RP11-240D10.4	1	2	0.554098
chr1	54641754	54710266	54676010	ENSG00000184313.19	+	protein_coding	KNOWN	MROH7	13	24	0.382736
chr1	54641786	54742308	54692047	ENSG00000271723.5	+	protein_coding	KNOWN	MROH7-TTC4	4	33	0.321852
chr1	54715822	54742657	54729239	ENSG00000243725.6	+	protein_coding	KNOWN	TTC4	4	10	0.168368
chr1	54756898	54764514	54760706	ENSG00000162396.5	-	protein_coding	KNOWN	PARS2	1	2	0.448613
chr1	54779712	54801267	54790489	ENSG00000006555.10	-	protein_coding	KNOWN	TTC22	5	7	0.356575
chr1	54792885	54794905	54793895	ENSG00000237453.1	+	antisense	KNOWN	RP11-67L3.2	1	2	0.469359
chr1	54806063	54842252	54824157	ENSG00000162398.11	+	protein_coding	KNOWN	LEXM	2	11	0.344985
chr1	54849633	54887218	54868425	ENSG00000116133.11	-	protein_coding	KNOWN	DHCR24	3	10	0.467331
chr1	54886875	54888001	54887438	ENSG00000242396.1	+	antisense	KNOWN	RP11-67L3.5	1	2	0.449544
chr1	54887563	54888850	54888206	ENSG00000233203.6	+	antisense	KNOWN	RP11-67L3.4	4	3	0.449544
chr1	54980792	54992293	54986542	ENSG00000143001.4	+	protein_coding	KNOWN	TMEM61	1	3	0.517537
chr1	54980950	54992274	54986612	ENSG00000233271.1	-	antisense	KNOWN	RP11-12C17.2	1	2	0.517712
chr1	54998933	55010883	55004908	ENSG00000162399.6	+	protein_coding	KNOWN	BSND	1	4	0.620317
chr1	55039548	55064852	55052200	ENSG00000169174.10	+	protein_coding	KNOWN	PCSK9	2	12	0.498882
chr1	55066359	55215113	55140736	ENSG00000162402.13	-	protein_coding	KNOWN	USP24	7	68	0.042059
chr1	55217861	55234177	55226019	ENSG00000231090.1	+	lincRNA	KNOWN	RP11-101C11.1	1	2	0.009936
chr1	55222379	55223372	55222875	ENSG00000231095.1	+	processed_pseudogene	KNOWN	GYG1P3	1	1	-0.072819
chr1	55225641	55225723	55225682	ENSG00000265822.1	+	miRNA	KNOWN	MIR4422	1	1	-0.072819
chr1	55367466	55368774	55368120	ENSG00000231900.3	+	processed_pseudogene	KNOWN	GOT2P1	1	1	0.007779
chr1	55372710	55373316	55373013	ENSG00000232198.2	-	processed_pseudogene	KNOWN	RP4-633H17.2	1	1	0.175320
chr1	55376526	55376852	55376689	ENSG00000199831.1	-	misc_RNA	KNOWN	RN7SKP291	1	1	0.175320
chr1	55398514	55398620	55398567	ENSG00000252162.1	+	snRNA	KNOWN	RNU6-830P	1	1	-0.152546
chr1	55484871	55484972	55484921	ENSG00000272051.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.175893
chr1	55581037	55868248	55724642	ENSG00000234810.2	+	lincRNA	KNOWN	RP11-90C4.1	3	5	0.016022
chr1	55915607	55944974	55930290	ENSG00000230250.2	-	lincRNA	KNOWN	RP11-90C4.2	2	3	-0.095728
chr1	55938714	55939280	55938997	ENSG00000227104.3	-	transcribed_unprocessed_pseudogene	KNOWN	PIGQP1	1	2	0.083954
chr1	55945087	55950119	55947603	ENSG00000233079.1	+	lincRNA	KNOWN	RP11-90C4.3	1	2	0.079919
chr1	56145721	56155224	56150472	ENSG00000235612.1	+	lincRNA	KNOWN	RP1-158P9.1	1	3	-0.107571
chr1	56207567	56208456	56208011	ENSG00000229871.1	-	processed_pseudogene	KNOWN	RPSAP20	1	1	0.017224
chr1	56248294	56258571	56253432	ENSG00000260971.3	-	lincRNA	KNOWN	RP11-504A18.1	1	3	-0.093576
chr1	56377333	56377418	56377375	ENSG00000223307.2	-	miRNA	NOVEL	AC119674.1	1	1	-0.113233
chr1	56414963	56415966	56415464	ENSG00000223956.2	+	lincRNA	KNOWN	RP4-710M16.2	2	4	-0.065837
chr1	56494747	56645301	56570024	ENSG00000162407.8	-	protein_coding	KNOWN	PLPP3	5	6	-0.118268
chr1	56538452	56538911	56538681	ENSG00000236776.1	+	processed_pseudogene	KNOWN	RPL21P23	1	1	0.108480
chr1	56585612	56586242	56585927	ENSG00000224980.1	-	processed_pseudogene	KNOWN	RPL23AP85	1	2	-0.027590
chr1	56619409	56619549	56619479	ENSG00000225475.1	-	processed_pseudogene	KNOWN	RP11-377K22.2	1	1	-0.496694
chr1	56645322	56715335	56680328	ENSG00000162409.10	+	protein_coding	KNOWN	PRKAA2	2	10	-0.504431
chr1	56718804	56819696	56769250	ENSG00000187889.12	-	protein_coding	KNOWN	C1orf168	5	20	-0.546726
chr1	56823679	56826920	56825299	ENSG00000229913.1	-	antisense	KNOWN	RP11-378I13.1	1	2	0.035408
chr1	56854806	56918221	56886513	ENSG00000157131.10	+	protein_coding	KNOWN	C8A	1	11	-0.207996
chr1	56929210	56966140	56947675	ENSG00000021852.12	-	protein_coding	KNOWN	C8B	6	13	0.112510
chr1	56963886	56996757	56980321	ENSG00000236341.1	+	antisense	KNOWN	RP5-1103B4.3	1	4	-0.237601
chr1	56966280	56966362	56966321	ENSG00000221591.1	+	miRNA	NOVEL	AL161740.1	1	1	0.084379
chr1	56994778	58546734	57770756	ENSG00000173406.15	-	protein_coding	KNOWN	DAB1	11	21	-0.254768
chr1	57386576	57387450	57387013	ENSG00000227935.1	+	lincRNA	KNOWN	RP6-102O10.1	1	2	-0.270578
chr1	57605847	57606206	57606026	ENSG00000236888.1	-	processed_pseudogene	KNOWN	RPS20P5	1	1	-0.293899
chr1	57757084	57757176	57757130	ENSG00000238773.1	+	miRNA	NOVEL	AL137855.1	1	1	-0.539513
chr1	57860532	57880905	57870718	ENSG00000226759.7	+	antisense	KNOWN	DAB1-AS1	27	6	-0.306959
chr1	58047889	58049335	58048612	ENSG00000229887.4	-	transcribed_unprocessed_pseudogene	KNOWN	HNRNPA1P6	2	1	-0.246331
chr1	58056133	58056480	58056306	ENSG00000223416.3	-	processed_pseudogene	KNOWN	RPS26P15	1	1	-0.300747
chr1	58060139	58080274	58070206	ENSG00000235038.1	+	lincRNA	KNOWN	RP11-393I23.4	1	5	-0.137668
chr1	58084419	58084559	58084489	ENSG00000230546.1	+	unprocessed_pseudogene	KNOWN	RP11-393I23.3	1	1	0.018825
chr1	58228682	58229003	58228842	ENSG00000233216.1	-	processed_pseudogene	KNOWN	RP11-414C16.1	1	1	-0.035013
chr1	58415384	58546802	58481093	ENSG00000162600.11	-	protein_coding	KNOWN	OMA1	11	9	0.077261
chr1	58552913	58553333	58553123	ENSG00000270209.1	-	processed_pseudogene	KNOWN	RP4-592A1.4	1	1	-0.113123
chr1	58565631	58565932	58565781	ENSG00000264128.2	-	misc_RNA	KNOWN	RN7SL713P	1	1	-0.113123
chr1	58575423	58577773	58576598	ENSG00000184292.6	-	protein_coding	KNOWN	TACSTD2	1	1	-0.218650
chr1	58630841	58631530	58631185	ENSG00000185839.3	-	processed_pseudogene	KNOWN	RP4-592A1.2	1	1	-0.003933
chr1	58654739	58700092	58677415	ENSG00000162601.9	-	protein_coding	KNOWN	MYSM1	8	20	-0.033167
chr1	58764849	58764935	58764892	ENSG00000264081.1	-	miRNA	NOVEL	AL136985.1	1	1	0.076644
chr1	58780788	58784327	58782557	ENSG00000177606.6	-	protein_coding	KNOWN	JUN	1	1	-0.105948
chr1	58785160	58899594	58842377	ENSG00000234807.5	+	lincRNA	KNOWN	LINC01135	1	4	0.189035
chr1	58812808	58813342	58813075	ENSG00000272226.1	-	lincRNA	KNOWN	RP11-63G10.3	1	1	0.280437
chr1	58838448	58851254	58844851	ENSG00000231740.1	-	lincRNA	KNOWN	RP11-63G10.2	1	3	0.127609
chr1	58882868	58903747	58893307	ENSG00000232453.6	-	lincRNA	KNOWN	RP4-794H19.1	5	5	0.221390
chr1	58933643	59240555	59087099	ENSG00000237352.3	+	lincRNA	KNOWN	LINC01358	11	14	0.109009
chr1	58999676	59000494	59000085	ENSG00000228121.1	+	processed_pseudogene	KNOWN	PHBP3	1	1	-0.084886
chr1	59054397	59056049	59055223	ENSG00000241042.1	-	lincRNA	KNOWN	RP11-145M4.1	1	2	0.373506
chr1	59055999	59078116	59067057	ENSG00000235215.2	-	lincRNA	KNOWN	RP11-145M4.2	1	3	0.223882
chr1	59131936	59208121	59170028	ENSG00000224609.6	-	processed_transcript	KNOWN	HSD52	10	5	0.048465
chr1	59289303	59289640	59289471	ENSG00000270457.1	-	lincRNA	KNOWN	RP11-467C18.1	1	1	-0.062731
chr1	59296638	59810647	59553642	ENSG00000172456.17	+	protein_coding	KNOWN	FGGY	25	20	-0.003923
chr1	59733227	59733296	59733261	ENSG00000266150.1	-	miRNA	KNOWN	MIR4711	1	1	-0.091720
chr1	59754747	59789182	59771964	ENSG00000226883.1	-	antisense	KNOWN	RP4-782L23.2	1	2	-0.167926
chr1	59814786	59876378	59845582	ENSG00000134709.10	+	protein_coding	KNOWN	HOOK1	6	22	-0.545295
chr1	59893308	59926790	59910049	ENSG00000134716.9	-	protein_coding	KNOWN	CYP2J2	5	10	-0.423260
chr1	59974757	59975054	59974905	ENSG00000265535.2	-	misc_RNA	KNOWN	RN7SL475P	1	1	0.148260
chr1	59987269	60073770	60030519	ENSG00000162598.13	-	protein_coding	KNOWN	C1orf87	5	12	-0.432051
chr1	60097415	60097976	60097695	ENSG00000229332.2	+	processed_pseudogene	KNOWN	PGBD4P8	1	1	-0.457565
chr1	60114875	60149679	60132277	ENSG00000238242.1	+	lincRNA	KNOWN	RP11-575B7.3	1	3	-0.459539
chr1	60515716	60640491	60578103	ENSG00000226476.3	-	lincRNA	KNOWN	RP11-776H12.1	5	8	-0.465349
chr1	60659631	60867998	60763814	ENSG00000231252.2	-	lincRNA	KNOWN	RP11-436K8.1	3	10	-0.415796
chr1	60865259	61462793	61164026	ENSG00000162599.15	+	protein_coding	KNOWN	NFIA	14	12	-0.181905
chr1	60915050	60915188	60915119	ENSG00000280760.1	+	miRNA	NOVEL	AL355795.1	1	1	-0.285765
chr1	60940239	60970776	60955507	ENSG00000237928.5	-	antisense	KNOWN	NFIA-AS2	3	7	-0.209706
chr1	61124733	61125202	61124967	ENSG00000270742.1	+	sense_intronic	KNOWN	RP4-802A10.1	1	1	-0.263339
chr1	61248945	61253510	61251227	ENSG00000237853.6	-	processed_transcript	KNOWN	NFIA-AS1	7	4	-0.213327
chr1	61629031	61629121	61629076	ENSG00000264551.1	+	miRNA	NOVEL	AC099791.1	1	1	0.054759
chr1	61654194	61654908	61654551	ENSG00000223920.2	+	processed_pseudogene	KNOWN	RP11-430G17.1	1	1	0.101037
chr1	61681046	61725423	61703234	ENSG00000162604.12	-	protein_coding	KNOWN	TM2D1	12	8	-0.015045
chr1	61741998	61742424	61742211	ENSG00000271200.1	-	lincRNA	KNOWN	RP11-430G17.3	1	1	-0.031997
chr1	61742477	62178675	61960576	ENSG00000132849.19	+	protein_coding	KNOWN	INADL	16	43	-0.054216
chr1	61816419	61816522	61816470	ENSG00000200575.1	+	snRNA	KNOWN	RNU6-414P	1	1	-0.179310
chr1	61852499	61852602	61852550	ENSG00000212360.1	+	snRNA	KNOWN	RNU6-1177P	1	1	-0.106989
chr1	62038842	62039111	62038976	ENSG00000236646.1	+	processed_pseudogene	KNOWN	LAMTOR5P1	1	1	-0.120417
chr1	62072448	62072741	62072594	ENSG00000242860.3	+	misc_RNA	KNOWN	RN7SL180P	1	1	0.194242
chr1	62078786	62078859	62078822	ENSG00000263908.1	+	miRNA	KNOWN	MIR3116-2	1	1	0.194242
chr1	62189131	62189953	62189542	ENSG00000234204.1	+	processed_pseudogene	KNOWN	PIGPP2	1	2	0.362081
chr1	62190522	62190926	62190724	ENSG00000234088.1	+	processed_pseudogene	KNOWN	RPS15AP7	1	1	0.142032
chr1	62194831	62212328	62203579	ENSG00000240563.1	+	protein_coding	KNOWN	L1TD1	1	4	0.114401
chr1	62208136	62208442	62208289	ENSG00000237227.1	-	processed_pseudogene	KNOWN	RP5-1155K23.4	1	1	0.142032
chr1	62211557	62211666	62211611	ENSG00000200174.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.065549
chr1	62236979	62319414	62278196	ENSG00000132854.18	-	protein_coding	KNOWN	KANK4	4	10	0.170154
chr1	62298149	62298256	62298202	ENSG00000201153.1	-	snRNA	KNOWN	RNU6-371P	1	1	0.166374
chr1	62436297	62451804	62444050	ENSG00000162607.12	+	protein_coding	KNOWN	USP1	4	9	0.088006
chr1	62454726	62688368	62571547	ENSG00000116641.16	-	protein_coding	KNOWN	DOCK7	21	50	-0.086673
chr1	62530636	62530873	62530754	ENSG00000270549.1	+	processed_pseudogene	KNOWN	RP11-293K19.1	1	1	-0.031067
chr1	62597487	62606159	62601823	ENSG00000132855.4	+	protein_coding	KNOWN	ANGPTL3	3	7	-0.227468
chr1	62607766	62609584	62608675	ENSG00000278967.1	+	TEC	KNOWN	RP5-849H19.3	1	1	-0.227468
chr1	62641122	62641667	62641394	ENSG00000213703.2	-	processed_pseudogene	KNOWN	RP5-849H19.2	1	1	-0.186309
chr1	62688482	62710694	62699588	ENSG00000235545.1	+	antisense	KNOWN	RP11-230B22.1	1	2	0.068262
chr1	62784135	62865513	62824824	ENSG00000125703.14	+	protein_coding	KNOWN	ATG4C	5	11	-0.243829
chr1	62896009	62901639	62898824	ENSG00000234318.1	+	lincRNA	KNOWN	RP4-771M4.3	1	2	-0.233778
chr1	62905180	62905482	62905331	ENSG00000237163.1	+	processed_pseudogene	KNOWN	RP4-771M4.2	1	1	-0.233778
chr1	63000497	63012471	63006484	ENSG00000229537.5	-	lincRNA	KNOWN	RP11-5P4.1	3	2	-0.315620
chr1	63024207	63025658	63024932	ENSG00000227485.1	+	lincRNA	KNOWN	RP11-5P4.2	1	2	-0.202843
chr1	63078081	63079031	63078556	ENSG00000229225.1	-	lincRNA	KNOWN	RP11-5P4.3	1	2	-0.130401
chr1	63139250	63163153	63151201	ENSG00000203605.3	+	lincRNA	KNOWN	RP11-335E6.2	1	3	-0.535179
chr1	63159087	63317274	63238180	ENSG00000224209.7	-	processed_transcript	KNOWN	LINC00466	10	11	-0.390197
chr1	63186336	63186450	63186393	ENSG00000252259.1	-	rRNA	KNOWN	RNA5SP49	1	1	-0.311905
chr1	63249920	63251771	63250845	ENSG00000228734.2	+	lincRNA	KNOWN	RP11-335E6.3	1	2	-0.407772
chr1	63262113	63262707	63262410	ENSG00000223683.1	+	processed_pseudogene	KNOWN	RPSAP65	1	1	-0.410509
chr1	63320884	63324441	63322662	ENSG00000230798.5	-	antisense	KNOWN	FOXD3-AS1	5	4	0.015820
chr1	63323041	63325126	63324083	ENSG00000187140.5	+	protein_coding	KNOWN	FOXD3	1	1	0.015820
chr1	63326925	63326984	63326954	ENSG00000275836.1	-	miRNA	KNOWN	MIR6068	1	1	0.015820
chr1	63338263	63338372	63338317	ENSG00000252784.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.066912
chr1	63359823	63361179	63360501	ENSG00000236674.1	-	processed_pseudogene	KNOWN	RP4-792G4.3	1	1	-0.298798
chr1	63367590	63438562	63403076	ENSG00000088035.15	+	protein_coding	KNOWN	ALG6	7	15	-0.300776
chr1	63440770	63593721	63517245	ENSG00000142856.16	-	protein_coding	KNOWN	ITGB3BP	14	10	-0.239991
chr1	63523372	63572693	63548032	ENSG00000203965.12	+	protein_coding	KNOWN	EFCAB7	6	14	-0.098193
chr1	63529613	63529898	63529755	ENSG00000264271.2	-	misc_RNA	KNOWN	RN7SL488P	1	1	-0.077933
chr1	63536711	63536770	63536740	ENSG00000251720.1	-	snRNA	KNOWN	RNU7-123P	1	1	-0.252343
chr1	63547082	63550636	63548859	ENSG00000116652.6	+	sense_intronic	KNOWN	DLEU2L	1	1	-0.195647
chr1	63548977	63549112	63549044	ENSG00000276884.1	-	misc_RNA	NOVEL	DLEU2_6	1	1	-0.252343
chr1	63549133	63549216	63549174	ENSG00000278287.1	-	misc_RNA	NOVEL	DLEU2_5	1	1	-0.252343
chr1	63549227	63549284	63549255	ENSG00000277565.1	-	misc_RNA	NOVEL	DLEU2_4	1	1	-0.252343
chr1	63549294	63549366	63549330	ENSG00000275823.1	-	misc_RNA	NOVEL	DLEU2_3	1	1	-0.252343
chr1	63549374	63549463	63549418	ENSG00000277689.1	-	misc_RNA	NOVEL	DLEU2_2	1	1	-0.252343
chr1	63549489	63549608	63549548	ENSG00000274199.1	-	misc_RNA	NOVEL	DLEU2_1	1	1	-0.252343
chr1	63593276	63660245	63626760	ENSG00000079739.15	+	protein_coding	KNOWN	PGM1	5	11	0.118992
chr1	63655743	63656047	63655895	ENSG00000244256.3	+	misc_RNA	KNOWN	RN7SL130P	1	1	0.163250
chr1	63774022	64181498	63977760	ENSG00000185483.11	+	protein_coding	KNOWN	ROR1	4	9	0.036493
chr1	63788721	63789304	63789012	ENSG00000177452.7	-	processed_pseudogene	KNOWN	RP4-597J3.1	1	1	-0.088580
chr1	63843196	63843685	63843440	ENSG00000228056.3	-	processed_pseudogene	KNOWN	CFL1P3	1	1	0.237669
chr1	64028894	64029000	64028947	ENSG00000207190.1	-	snRNA	KNOWN	RNU6-809P	1	1	0.013518
chr1	64066640	64066741	64066690	ENSG00000200508.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.226184
chr1	64094442	64171297	64132869	ENSG00000223949.6	-	antisense	KNOWN	ROR1-AS1	2	6	0.065642
chr1	64203627	64267368	64235497	ENSG00000177414.13	+	protein_coding	KNOWN	UBE2U	6	10	-0.129851
chr1	64384398	64384459	64384428	ENSG00000238653.1	-	snRNA	KNOWN	RNU7-62P	1	1	-0.218348
chr1	64470792	64693058	64581925	ENSG00000158966.13	+	protein_coding	KNOWN	CACHD1	4	27	-0.137930
chr1	64579847	64579923	64579885	ENSG00000264470.1	+	miRNA	KNOWN	MIR4794	1	1	-0.060011
chr1	64745095	64833232	64789163	ENSG00000162437.14	+	protein_coding	KNOWN	RAVER2	3	12	-0.243505
chr1	64833229	64966504	64899866	ENSG00000162434.11	-	protein_coding	KNOWN	JAK1	6	25	0.035015
chr1	64918443	64918683	64918563	ENSG00000234784.2	+	processed_pseudogene	KNOWN	RP11-182I10.1	1	1	-0.105241
chr1	64941979	64942365	64942172	ENSG00000233877.2	+	processed_pseudogene	KNOWN	RP11-182I10.2	1	1	-0.210804
chr1	64972225	65002489	64987357	ENSG00000226891.7	-	processed_transcript	KNOWN	LINC01359	9	9	-0.188128
chr1	64984608	64986087	64985347	ENSG00000185031.6	-	processed_pseudogene	KNOWN	SLC2A3P2	1	1	-0.209835
chr1	65003470	65004087	65003778	ENSG00000272506.1	-	lincRNA	KNOWN	RP4-535B20.4	1	1	-0.157237
chr1	65022968	65023074	65023021	ENSG00000212257.1	-	snRNA	KNOWN	RNU6-1176P	1	1	0.017991
chr1	65057755	65057842	65057798	ENSG00000265996.1	-	miRNA	KNOWN	MIR3671	1	1	-0.025502
chr1	65058434	65058508	65058471	ENSG00000199135.1	-	miRNA	KNOWN	MIR101-1	1	1	-0.025502
chr1	65066627	65067737	65067182	ENSG00000231485.1	-	lincRNA	KNOWN	RP4-535B20.1	1	2	-0.025502
chr1	65077413	65078131	65077772	ENSG00000235804.2	-	processed_pseudogene	KNOWN	RP4-535B20.2	1	2	-0.027155
chr1	65092392	65092614	65092503	ENSG00000234496.2	-	processed_pseudogene	KNOWN	MRPS21P1	1	1	-0.022720
chr1	65147549	65232145	65189847	ENSG00000162433.14	+	protein_coding	KNOWN	AK4	8	6	-0.126505
chr1	65154480	65154650	65154565	ENSG00000231622.1	+	processed_pseudogene	KNOWN	RP4-700A9.1	1	1	0.015641
chr1	65248219	65415869	65332044	ENSG00000116675.15	+	protein_coding	KNOWN	DNAJC6	8	20	-0.032714
chr1	65279456	65306521	65292988	ENSG00000229294.1	-	antisense	KNOWN	RP5-1044H5.1	1	2	-0.132018
chr1	65298755	65298980	65298867	ENSG00000234144.1	-	processed_pseudogene	KNOWN	COX6CP13	1	1	-0.105045
chr1	65415816	65416006	65415911	ENSG00000222624.1	+	snRNA	KNOWN	RNU2-15P	1	1	0.018411
chr1	65420587	65436007	65428297	ENSG00000213625.8	+	protein_coding	KNOWN	LEPROT	6	5	0.111294
chr1	65420652	65641559	65531105	ENSG00000116678.18	+	protein_coding	KNOWN	LEPR	9	20	-0.127714
chr1	65486406	65494188	65490297	ENSG00000237852.1	+	sense_intronic	KNOWN	RP4-630A11.3	1	2	-0.001774
chr1	65576129	65578380	65577254	ENSG00000224570.1	-	processed_pseudogene	KNOWN	RP11-430H12.2	1	2	-0.109642
chr1	65761058	65761352	65761205	ENSG00000239319.3	-	misc_RNA	KNOWN	RN7SL854P	1	1	-0.116955
chr1	65792514	66374579	66083546	ENSG00000184588.17	+	protein_coding	KNOWN	PDE4B	18	17	-0.328763
chr1	66042500	66050718	66046609	ENSG00000227466.1	-	antisense	KNOWN	RP11-397C12.1	1	3	-0.463568
chr1	66094461	66094546	66094503	ENSG00000223152.1	-	snRNA	KNOWN	RNU4-88P	1	1	-0.521540
chr1	66533383	66748299	66640841	ENSG00000118473.21	+	protein_coding	KNOWN	SGIP1	14	27	-0.057869
chr1	66628415	66628525	66628470	ENSG00000264720.2	+	miRNA	NOVEL	AL139147.1	1	1	-0.163953
chr1	66665864	66677027	66671445	ENSG00000248458.2	-	antisense	KNOWN	RP4-598P13.1	1	2	-0.025177
chr1	66730967	66731058	66731012	ENSG00000221655.2	-	miRNA	NOVEL	AL354978.1	1	1	0.039841
chr1	66752459	66778787	66765623	ENSG00000152760.9	+	protein_coding	KNOWN	TCTEX1D1	6	7	-0.312642
chr1	66797741	66801256	66799498	ENSG00000172410.4	-	protein_coding	KNOWN	INSL5	1	2	-0.424925
chr1	66812885	66924887	66868886	ENSG00000152763.16	-	protein_coding	KNOWN	WDR78	12	17	-0.339417
chr1	66826942	66828558	66827750	ENSG00000231080.1	+	antisense	KNOWN	RP11-342H21.2	1	2	-0.508912
chr1	66924895	66988619	66956757	ENSG00000198160.14	+	protein_coding	KNOWN	MIER1	11	16	-0.085324
chr1	66999332	67054099	67026715	ENSG00000116704.7	-	protein_coding	KNOWN	SLC35D1	1	12	-0.059130
chr1	67092165	67231853	67162009	ENSG00000203963.11	-	protein_coding	KNOWN	C1orf141	8	10	-0.316382
chr1	67102645	67102779	67102712	ENSG00000252433.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.371720
chr1	67121605	67123956	67122780	ENSG00000275678.1	-	sense_intronic	KNOWN	RP4-547N15.3	1	1	-0.572260
chr1	67166400	67259979	67213189	ENSG00000162594.14	+	protein_coding	KNOWN	IL23R	4	11	-0.324361
chr1	67196140	67196243	67196191	ENSG00000253074.1	+	snRNA	KNOWN	RNU6-586P	1	1	-0.375134
chr1	67239440	67239527	67239483	ENSG00000221733.1	-	miRNA	NOVEL	AL109843.1	1	1	-0.323046
chr1	67267601	67267726	67267663	ENSG00000252116.1	-	snRNA	KNOWN	RNU4ATAC4P	1	1	-0.100653
chr1	67278052	67278779	67278415	ENSG00000228523.1	+	processed_pseudogene	KNOWN	RP11-131O15.2	1	1	-0.363460
chr1	67307364	67396900	67352132	ENSG00000081985.10	+	protein_coding	KNOWN	IL12RB2	6	16	0.075203
chr1	67407810	67430415	67419112	ENSG00000142864.14	-	protein_coding	KNOWN	SERBP1	8	8	-0.071205
chr1	67417214	67417318	67417266	ENSG00000223263.1	+	snRNA	KNOWN	RNU6-387P	1	1	-0.116761
chr1	67522347	67532612	67527479	ENSG00000235200.2	+	lincRNA	KNOWN	RP11-393N21.2	3	5	0.093198
chr1	67541127	67541233	67541180	ENSG00000207504.1	+	snRNA	KNOWN	RNU6-1031P	1	1	0.339475
chr1	67561073	67561446	67561259	ENSG00000238139.2	+	processed_pseudogene	KNOWN	RP11-393N21.1	1	1	0.352144
chr1	67656831	67657129	67656980	ENSG00000242482.3	-	misc_RNA	KNOWN	RN7SL392P	1	1	-0.189779
chr1	67660155	67661013	67660584	ENSG00000232048.2	-	processed_pseudogene	KNOWN	HNRNPCP9	1	1	-0.189779
chr1	67685061	67688338	67686699	ENSG00000116717.11	+	protein_coding	KNOWN	GADD45A	5	4	0.125741
chr1	67701466	67833467	67767466	ENSG00000172380.5	-	protein_coding	KNOWN	GNG12	2	4	0.246675
chr1	67772593	67772653	67772623	ENSG00000238778.1	-	snRNA	KNOWN	RNU7-80P	1	1	-0.198401
chr1	67832303	68202987	68017645	ENSG00000232284.7	+	antisense	KNOWN	GNG12-AS1	4	10	-0.007752
chr1	68043330	68044233	68043781	ENSG00000235055.3	+	processed_pseudogene	KNOWN	RP4-609E1.2	1	1	-0.221824
chr1	68045962	68051631	68048796	ENSG00000162595.4	-	protein_coding	KNOWN	DIRAS3	2	4	-0.232384
chr1	68049360	68049745	68049552	ENSG00000228431.1	-	processed_pseudogene	KNOWN	ARL5AP3	1	1	-0.221824
chr1	68058177	68058262	68058219	ENSG00000263542.1	+	miRNA	NOVEL	AL157407.1	1	1	-0.258505
chr1	68098473	68233120	68165796	ENSG00000116729.13	-	protein_coding	KNOWN	WLS	14	12	-0.051622
chr1	68161761	68163090	68162425	ENSG00000234383.1	-	processed_pseudogene	KNOWN	CTBP2P8	1	1	-0.270578
chr1	68183518	68183610	68183564	ENSG00000221203.1	-	miRNA	KNOWN	MIR1262	1	1	0.016441
chr1	68242474	68243055	68242764	ENSG00000229133.1	-	processed_pseudogene	KNOWN	RPS7P4	1	1	0.011072
chr1	68282388	68282622	68282505	ENSG00000225242.2	+	processed_pseudogene	KNOWN	COX6B1P7	1	1	-0.119063
chr1	68375327	68375663	68375495	ENSG00000237622.1	-	processed_pseudogene	KNOWN	TCEB1P18	1	1	0.119128
chr1	68381441	68381657	68381549	ENSG00000229440.1	-	processed_pseudogene	KNOWN	RP5-1033K19.2	1	1	0.119128
chr1	68428822	68449959	68439390	ENSG00000116745.6	-	protein_coding	KNOWN	RPE65	1	14	-0.235096
chr1	68474152	68497221	68485686	ENSG00000024526.16	-	protein_coding	KNOWN	DEPDC1	5	13	-0.263741
chr1	68479129	68483539	68481334	ENSG00000233589.1	+	antisense	KNOWN	RP4-694A7.2	1	2	-0.193100
chr1	68496676	68538627	68517651	ENSG00000234264.1	+	antisense	KNOWN	DEPDC1-AS1	1	3	-0.475888
chr1	68514375	68514669	68514522	ENSG00000225167.1	-	processed_pseudogene	KNOWN	TXNP2	1	1	-0.502955
chr1	69055898	69185003	69120450	ENSG00000223883.1	+	lincRNA	KNOWN	RP11-424D14.1	1	5	-0.519469
chr1	69243372	69249423	69246397	ENSG00000235446.1	-	lincRNA	KNOWN	RP11-74K19.1	1	2	-0.127789
chr1	69433255	69435409	69434332	ENSG00000229639.1	+	lincRNA	KNOWN	RP3-380B4.1	1	2	-0.546500
chr1	69568398	70151945	69860171	ENSG00000033122.18	+	protein_coding	KNOWN	LRRC7	13	27	-0.516304
chr1	69606855	69608301	69607578	ENSG00000270615.1	-	processed_pseudogene	KNOWN	SGOL1P1	1	1	-0.694413
chr1	69879592	69879895	69879743	ENSG00000240692.3	+	misc_RNA	KNOWN	RN7SL538P	1	1	-0.414968
chr1	69919322	69920317	69919819	ENSG00000229359.2	+	transcribed_processed_pseudogene	KNOWN	PIN1P1	2	1	-0.396397
chr1	70013982	70031222	70022602	ENSG00000237919.5	-	antisense	KNOWN	RP11-181B18.1	2	4	-0.556950
chr1	70144805	70205620	70175212	ENSG00000066557.5	-	protein_coding	KNOWN	LRRC40	1	15	-0.620814
chr1	70180144	70180440	70180292	ENSG00000244389.3	-	misc_RNA	KNOWN	RN7SL242P	1	1	-0.671941
chr1	70205682	70253052	70229367	ENSG00000116754.13	+	protein_coding	KNOWN	SRSF11	16	13	-0.119965
chr1	70218589	70221023	70219806	ENSG00000228988.1	-	antisense	KNOWN	RP4-677H15.4	1	2	0.075216
chr1	70260588	70354734	70307661	ENSG00000118454.12	-	protein_coding	KNOWN	ANKRD13C	5	13	-0.145179
chr1	70354805	70385339	70370072	ENSG00000197568.13	+	protein_coding	KNOWN	HHLA3	7	5	-0.002993
chr1	70359562	70360437	70359999	ENSG00000226088.1	-	antisense	KNOWN	RP11-180O5.2	1	2	0.074714
chr1	70363780	70366135	70364957	ENSG00000279230.1	-	protein_coding	KNOWN	AL158839.1	1	3	0.074714
chr1	70411218	70439851	70425534	ENSG00000116761.11	+	protein_coding	KNOWN	CTH	5	12	-0.171314
chr1	70430896	70431178	70431037	ENSG00000278636.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.323046
chr1	70445071	70445536	70445303	ENSG00000271992.1	+	lincRNA	KNOWN	RP11-42O15.3	1	1	-0.323046
chr1	70530526	70531492	70531009	ENSG00000233020.1	+	processed_pseudogene	KNOWN	RP11-42O15.2	1	1	-0.086345
chr1	70660657	70661265	70660961	ENSG00000237033.2	-	processed_pseudogene	KNOWN	CASP3P1	1	1	-0.447741
chr1	70706453	70786468	70746460	ENSG00000229051.1	+	lincRNA	KNOWN	RP5-952N6.1	1	7	-0.242810
chr1	70715933	70720289	70718111	ENSG00000226208.1	-	lincRNA	KNOWN	RP11-99H8.1	1	2	-0.320331
chr1	70852353	71047808	70950080	ENSG00000050628.20	-	protein_coding	KNOWN	PTGER3	12	7	-0.380677
chr1	70947379	70951493	70949436	ENSG00000235782.1	+	antisense	KNOWN	RP3-333A15.1	1	3	-0.285462
chr1	71005854	71006502	71006178	ENSG00000269933.1	-	sense_intronic	KNOWN	RP3-333A15.2	1	1	-0.356993
chr1	71048855	71067184	71058019	ENSG00000235079.1	+	antisense	KNOWN	ZRANB2-AS1	2	2	0.179306
chr1	71063291	71081297	71072294	ENSG00000132485.12	-	protein_coding	KNOWN	ZRANB2	8	11	-0.290418
chr1	71067631	71067716	71067673	ENSG00000207721.1	-	miRNA	KNOWN	MIR186	1	1	0.220725
chr1	71081324	71489976	71285650	ENSG00000229956.10	+	processed_transcript	KNOWN	ZRANB2-AS2	38	12	-0.451064
chr1	71141975	71142068	71142021	ENSG00000264239.1	-	miRNA	NOVEL	AL360297.1	1	1	-0.466004
chr1	71367054	71367303	71367178	ENSG00000226324.1	-	processed_pseudogene	KNOWN	RP11-115M14.1	1	1	-0.210278
chr1	71395940	72282734	71839337	ENSG00000172260.13	-	protein_coding	KNOWN	NEGR1	6	7	-0.448382
chr1	71570956	71573558	71572257	ENSG00000231985.1	+	antisense	KNOWN	RP11-82L20.1	1	2	-0.418746
chr1	71738173	71738354	71738263	ENSG00000271618.1	+	processed_pseudogene	KNOWN	RP11-175G14.2	1	1	-0.393435
chr1	71794232	71837012	71815622	ENSG00000228853.1	-	sense_intronic	KNOWN	NEGR1-IT1	1	3	-0.396487
chr1	72274552	72275159	72274855	ENSG00000233994.2	+	processed_pseudogene	KNOWN	GDI2P2	1	1	-0.445274
chr1	72301472	72301829	72301650	ENSG00000227207.2	+	processed_pseudogene	KNOWN	RPL31P12	1	1	-0.082687
chr1	72717663	72717769	72717716	ENSG00000212366.1	-	snRNA	KNOWN	RNU6-1246P	1	1	-0.834842
chr1	72748921	72899140	72824030	ENSG00000225087.1	-	lincRNA	KNOWN	RP4-660H19.1	1	5	-0.548661
chr1	72765031	72791282	72778156	ENSG00000227016.3	+	lincRNA	KNOWN	RP11-262K1.1	1	7	-0.662324
chr1	72979014	72979314	72979164	ENSG00000280317.1	-	TEC	KNOWN	RP11-25L19.1	1	1	-1.083095
chr1	73104792	73106282	73105537	ENSG00000229636.2	+	processed_pseudogene	KNOWN	KRT8P21	1	1	-0.365053
chr1	73191604	73191855	73191729	ENSG00000251825.1	-	misc_RNA	KNOWN	RN7SKP19	1	1	-0.238654
chr1	73306170	73355253	73330711	ENSG00000233973.6	+	lincRNA	KNOWN	LINC01360	6	4	-0.578766
chr1	73635216	73715214	73675215	ENSG00000223479.3	+	lincRNA	KNOWN	RP4-788P17.1	2	3	-0.319565
chr1	73749517	73749623	73749570	ENSG00000200601.1	-	rRNA	KNOWN	RNA5SP50	1	1	-1.048489
chr1	73883714	73883822	73883768	ENSG00000252005.2	+	snRNA	KNOWN	RNU4ATAC8P	1	1	-0.804630
chr1	74026015	74198187	74112101	ENSG00000162620.15	-	protein_coding	KNOWN	LRRIQ3	10	10	-0.546729
chr1	74198212	74234086	74216149	ENSG00000254685.6	+	protein_coding	KNOWN	FPGT	8	5	-0.496123
chr1	74198235	74543982	74371108	ENSG00000259030.6	+	protein_coding	KNOWN	FPGT-TNNI3K	6	27	-0.476368
chr1	74235401	74544428	74389914	ENSG00000116783.14	+	protein_coding	KNOWN	TNNI3K	8	25	-0.473553
chr1	74341579	74378802	74360190	ENSG00000237324.3	-	antisense	KNOWN	RP11-439H8.4	2	4	-0.425099
chr1	74468195	74469543	74468869	ENSG00000233894.1	+	antisense	KNOWN	RP4-650F12.2	2	2	-0.631299
chr1	74469878	74512614	74491246	ENSG00000162621.6	-	protein_coding	KNOWN	LRRC53	1	5	-0.463640
chr1	74568111	74673738	74620924	ENSG00000178965.13	-	protein_coding	KNOWN	ERICH3	5	15	-0.385953
chr1	74577430	74626098	74601764	ENSG00000234497.5	+	antisense	KNOWN	ERICH3-AS1	3	3	-0.363122
chr1	74698769	74699333	74699051	ENSG00000272864.1	-	lincRNA	KNOWN	RP11-17E13.2	1	1	-0.043523
chr1	74705482	74733408	74719445	ENSG00000116791.13	-	protein_coding	KNOWN	CRYZ	7	10	-0.316386
chr1	74733152	74766678	74749915	ENSG00000162623.15	+	protein_coding	KNOWN	TYW3	8	7	-0.118581
chr1	74963314	74965118	74964216	ENSG00000229943.1	+	lincRNA	KNOWN	RP11-93N20.1	1	2	-0.496637
chr1	75122518	75123927	75123222	ENSG00000261213.1	-	lincRNA	KNOWN	RP11-510C10.4	1	1	-0.694178
chr1	75127830	75133058	75130444	ENSG00000224127.1	-	antisense	KNOWN	RP11-510C10.2	1	2	-0.383871
chr1	75128434	75161533	75144983	ENSG00000162624.14	+	protein_coding	KNOWN	LHX8	3	10	-0.342418
chr1	75129974	75132576	75131275	ENSG00000224149.1	-	antisense	KNOWN	RP11-510C10.3	1	2	-0.168942
chr1	75182616	75182709	75182662	ENSG00000274200.1	+	miRNA	NOVEL	AC118550.1	1	1	-0.227698
chr1	75183045	75183147	75183096	ENSG00000206999.1	+	snRNA	KNOWN	RNU6-622P	1	1	-0.227698
chr1	75202131	75611116	75406623	ENSG00000137968.16	-	protein_coding	KNOWN	SLC44A5	3	24	-0.399068
chr1	75521562	75522231	75521896	ENSG00000224493.1	+	processed_pseudogene	KNOWN	RP11-87O11.1	1	1	-0.432670
chr1	75538015	75538119	75538067	ENSG00000252338.1	-	snRNA	KNOWN	RNU6-503P	1	1	-0.390160
chr1	75582099	75582555	75582327	ENSG00000213579.3	+	processed_pseudogene	KNOWN	RP4-595K12.1	1	1	-0.591273
chr1	75641346	75642087	75641716	ENSG00000230863.2	-	processed_pseudogene	KNOWN	RP4-595K12.2	1	1	-0.444061
chr1	75710003	75724011	75717007	ENSG00000178193.5	-	antisense	KNOWN	RP4-682C21.5	1	4	-0.397974
chr1	75724347	75787575	75755961	ENSG00000117054.13	+	protein_coding	KNOWN	ACADM	18	13	-0.021712
chr1	75743423	75744776	75744099	ENSG00000181227.3	-	processed_pseudogene	KNOWN	RP4-682C21.2	1	1	0.233084
chr1	75786197	75795079	75790638	ENSG00000137955.15	+	protein_coding	KNOWN	RABGGTB	14	10	0.043625
chr1	75787072	75787150	75787111	ENSG00000206620.1	+	snoRNA	KNOWN	SNORD45C	1	1	0.021602
chr1	75787889	75787972	75787930	ENSG00000207241.1	+	snoRNA	KNOWN	SNORD45A	1	1	0.021602
chr1	75789477	75789548	75789512	ENSG00000201487.1	+	snoRNA	KNOWN	SNORD45B	1	1	0.021602
chr1	75796882	75913238	75855060	ENSG00000057468.6	+	protein_coding	KNOWN	MSH4	1	20	-0.276309
chr1	75842632	75842717	75842674	ENSG00000266832.1	+	miRNA	NOVEL	AL445464.1	1	1	-0.121412
chr1	75918873	75932431	75925652	ENSG00000154007.6	-	protein_coding	KNOWN	ASB17	1	3	-0.238489
chr1	75932479	76019356	75975917	ENSG00000225605.2	+	lincRNA	KNOWN	RP11-550H2.1	2	8	-0.468962
chr1	76041691	76066228	76053959	ENSG00000230027.1	+	lincRNA	KNOWN	RP11-550H2.2	1	2	-0.110255
chr1	76074719	76634601	76354660	ENSG00000184005.10	+	protein_coding	KNOWN	ST6GALNAC3	3	5	-0.339018
chr1	76353583	76354246	76353914	ENSG00000223905.1	-	processed_pseudogene	KNOWN	RP11-335E14.1	1	1	-0.305344
chr1	76636877	76637339	76637108	ENSG00000272855.1	+	lincRNA	KNOWN	RP5-1102E8.3	1	1	-0.541581
chr1	76699789	76700538	76700163	ENSG00000226415.1	+	processed_pseudogene	KNOWN	TPI1P1	1	1	-0.540637
chr1	76718140	76718241	76718190	ENSG00000264686.1	+	miRNA	NOVEL	AC104458.1	1	1	-0.314433
chr1	76753135	76753240	76753187	ENSG00000199921.1	+	snRNA	KNOWN	RNU6-161P	1	1	-0.489056
chr1	76758124	76779267	76768695	ENSG00000237552.1	-	lincRNA	KNOWN	RP11-415A20.1	1	3	-0.400990
chr1	76867441	77065711	76966576	ENSG00000117069.14	+	protein_coding	KNOWN	ST6GALNAC5	5	5	-0.186569
chr1	77007744	77007815	77007779	ENSG00000221720.2	+	miRNA	NOVEL	AC096951.1	1	1	-0.384107
chr1	77060143	77060202	77060172	ENSG00000276081.1	+	miRNA	KNOWN	MIR7156	1	1	-0.064350
chr1	77067920	77078482	77073201	ENSG00000230498.1	+	antisense	KNOWN	RP4-564M11.2	1	4	-0.215283
chr1	77088990	77219430	77154210	ENSG00000142892.14	-	protein_coding	KNOWN	PIGK	5	11	-0.271637
chr1	77129114	77129668	77129391	ENSG00000226084.5	+	processed_pseudogene	KNOWN	RP4-706A16.3	1	1	-0.116595
chr1	77194825	77195395	77195110	ENSG00000228187.1	+	processed_pseudogene	KNOWN	RP11-363H12.1	1	1	0.100259
chr1	77276638	77276747	77276692	ENSG00000278671.1	-	miRNA	NOVEL	AC093433.1	1	1	-0.290728
chr1	77282051	77559969	77421010	ENSG00000154027.18	+	protein_coding	KNOWN	AK5	13	14	0.046983
chr1	77346046	77349585	77347815	ENSG00000233099.1	-	antisense	KNOWN	RP11-375A5.1	1	2	-0.207568
chr1	77391422	77391528	77391475	ENSG00000221664.1	-	miRNA	NOVEL	AC095030.1	1	1	0.059202
chr1	77420325	77420386	77420355	ENSG00000251767.1	+	snRNA	KNOWN	RNU7-8P	1	1	0.116795
chr1	77562416	77683419	77622917	ENSG00000036549.12	-	protein_coding	KNOWN	ZZZ3	11	15	0.031285
chr1	77614869	77614952	77614910	ENSG00000251785.1	+	rRNA	KNOWN	RNA5SP20	1	1	0.312834
chr1	77645324	77645618	77645471	ENSG00000243437.3	+	misc_RNA	KNOWN	RN7SL370P	1	1	0.194090
chr1	77695987	77759852	77727919	ENSG00000077254.14	-	protein_coding	KNOWN	USP33	18	25	0.087850
chr1	77773865	77774864	77774364	ENSG00000232672.1	-	processed_pseudogene	KNOWN	ACTG1P21	1	1	0.044943
chr1	77779624	77879539	77829581	ENSG00000180488.14	+	protein_coding	KNOWN	FAM73A	4	16	0.081660
chr1	77779904	77779999	77779951	ENSG00000222849.1	+	rRNA	KNOWN	RNA5SP21	1	1	0.044943
chr1	77810861	77811781	77811321	ENSG00000219201.4	-	processed_pseudogene	KNOWN	RP11-181C21.4	1	1	-0.039253
chr1	77847110	77848802	77847956	ENSG00000235613.2	+	processed_pseudogene	KNOWN	NSRP1P1	1	1	0.199520
chr1	77853355	77853893	77853624	ENSG00000232015.2	+	processed_pseudogene	KNOWN	HSPE1P25	1	2	-0.043236
chr1	77881348	77889539	77885443	ENSG00000235927.4	-	antisense	KNOWN	NEXN-AS1	1	3	0.299036
chr1	77888513	77943895	77916204	ENSG00000162614.18	+	protein_coding	KNOWN	NEXN	8	13	0.099135
chr1	77944055	77979110	77961582	ENSG00000162613.16	-	protein_coding	KNOWN	FUBP1	13	21	0.081533
chr1	77979175	78017964	77998569	ENSG00000162616.8	+	protein_coding	KNOWN	DNAJB4	6	4	0.037809
chr1	77979542	78138449	78058995	ENSG00000137960.5	+	protein_coding	KNOWN	GIPC2	2	6	0.079759
chr1	78004346	78004554	78004450	ENSG00000273338.1	-	antisense	KNOWN	RP11-386I14.4	1	1	0.051120
chr1	78043383	78044148	78043765	ENSG00000213561.4	-	processed_pseudogene	KNOWN	RP11-386I14.2	1	1	0.082890
chr1	78088988	78089083	78089035	ENSG00000251958.1	-	snRNA	KNOWN	RNU6-1102P	1	1	0.024485
chr1	78091499	78092054	78091776	ENSG00000213560.4	+	processed_pseudogene	KNOWN	RP11-386I14.3	1	1	0.195085
chr1	78094807	78094915	78094861	ENSG00000202263.1	-	rRNA	KNOWN	RNA5SP22	1	1	0.195085
chr1	78170481	78171237	78170859	ENSG00000233333.2	-	processed_pseudogene	KNOWN	RNFT1P2	1	1	0.236808
chr1	78229599	78369464	78299531	ENSG00000237413.5	+	processed_transcript	KNOWN	MGC27382	2	6	0.138733
chr1	78303884	78539749	78421816	ENSG00000122420.9	+	protein_coding	KNOWN	PTGFR	4	5	-0.022434
chr1	78317157	78317263	78317210	ENSG00000227556.1	-	unprocessed_pseudogene	KNOWN	RP11-472F19.1	1	1	0.182757
chr1	78375164	78375268	78375216	ENSG00000212308.1	-	rRNA	KNOWN	RNA5SP23	1	1	0.355026
chr1	78619922	78646145	78633033	ENSG00000137959.15	+	protein_coding	KNOWN	IFI44L	10	9	-0.241285
chr1	78649796	78664078	78656937	ENSG00000137965.10	+	protein_coding	KNOWN	IFI44	9	9	-0.569610
chr1	78666272	78666695	78666483	ENSG00000238015.2	+	processed_pseudogene	KNOWN	RP4-641G12.3	1	1	-0.574107
chr1	78687060	78687160	78687110	ENSG00000221683.1	+	miRNA	NOVEL	AC104837.1	1	1	-0.158235
chr1	78749073	78750659	78749866	ENSG00000235400.1	+	processed_pseudogene	KNOWN	RP4-641G12.4	1	1	-0.283485
chr1	78889764	79006718	78948241	ENSG00000162618.12	-	protein_coding	KNOWN	ADGRL4	2	15	-0.477539
chr1	79054945	79056055	79055500	ENSG00000230787.1	-	processed_pseudogene	KNOWN	PSAT1P3	1	1	-0.289315
chr1	79135133	79135226	79135179	ENSG00000266388.1	-	miRNA	NOVEL	AC093430.1	1	1	-0.558934
chr1	79323769	79324852	79324310	ENSG00000282898.1	-	lincRNA	KNOWN	RP4-726F1.2	1	2	-0.739254
chr1	79323769	79324863	79324316	ENSG00000235011.2	+	lincRNA	KNOWN	RP4-726F1.1	1	2	-0.739254
chr1	79521080	79522203	79521641	ENSG00000232676.1	+	processed_pseudogene	KNOWN	ADH5P2	1	1	-0.309822
chr1	80092103	80093237	80092670	ENSG00000235756.2	-	processed_pseudogene	KNOWN	RP11-339A11.1	1	1	-0.406462
chr1	80114943	80116918	80115930	ENSG00000260322.1	+	lincRNA	KNOWN	RP11-339A11.2	1	1	-0.440503
chr1	80124004	80124361	80124182	ENSG00000277670.1	+	unprocessed_pseudogene	KNOWN	RP11-339A11.3	1	2	-0.440503
chr1	80283352	80283970	80283661	ENSG00000236407.1	+	processed_pseudogene	KNOWN	HMGB1P18	1	1	-0.573272
chr1	80373364	80374621	80373992	ENSG00000225598.1	-	lincRNA	KNOWN	RP11-339D23.1	1	2	-0.670969
chr1	80451083	80452004	80451543	ENSG00000213559.4	-	processed_pseudogene	KNOWN	HNRNPA1P64	1	1	-0.333030
chr1	80464301	80464718	80464509	ENSG00000227062.2	-	processed_pseudogene	KNOWN	RP11-115A15.4	1	1	-0.333030
chr1	80495903	80496233	80496068	ENSG00000234108.1	+	processed_pseudogene	KNOWN	RP11-115A15.2	1	1	-0.478896
chr1	80534978	80584363	80559670	ENSG00000224326.1	-	lincRNA	KNOWN	RP5-933B4.1	1	2	-0.666191
chr1	80535755	80646788	80591271	ENSG00000234184.5	+	lincRNA	KNOWN	RP5-887A10.1	3	4	-0.502009
chr1	80599705	80599793	80599749	ENSG00000223009.2	-	miRNA	NOVEL	AL136234.1	1	1	-0.206232
chr1	81080790	81081171	81080980	ENSG00000227937.1	+	processed_pseudogene	KNOWN	MTND2P30	1	1	-0.502016
chr1	81098267	81099005	81098636	ENSG00000229752.1	-	processed_pseudogene	KNOWN	RPL7P10	1	1	-0.461752
chr1	81208568	81209210	81208889	ENSG00000235089.1	+	processed_pseudogene	KNOWN	RP3-445O10.1	1	1	-0.152427
chr1	81251789	81252096	81251942	ENSG00000223026.1	+	misc_RNA	KNOWN	RN7SKP247	1	1	-0.216498
chr1	81306160	81992436	81649298	ENSG00000117114.19	+	protein_coding	KNOWN	ADGRL2	22	26	-0.464627
chr1	81426456	81427605	81427030	ENSG00000224494.1	+	processed_pseudogene	KNOWN	HNRNPA3P14	1	1	-0.106989
chr1	81501794	81503468	81502631	ENSG00000227288.3	+	processed_pseudogene	KNOWN	RP5-837I24.1	1	1	-0.601905
chr1	81505099	81506296	81505697	ENSG00000227960.1	+	sense_intronic	KNOWN	RP5-837I24.6	1	2	-0.601905
chr1	81513880	81557702	81535791	ENSG00000234953.2	-	antisense	KNOWN	RP5-837I24.2	1	4	-0.186011
chr1	81557121	81557832	81557476	ENSG00000242598.1	-	processed_pseudogene	KNOWN	MED28P8	1	2	-0.243429
chr1	81585941	81625713	81605827	ENSG00000236676.1	-	antisense	KNOWN	RP5-837I24.4	1	3	-0.378444
chr1	81596157	81596506	81596331	ENSG00000234683.1	-	processed_pseudogene	KNOWN	RP5-837I24.5	1	1	-0.290624
chr1	81721693	81723068	81722380	ENSG00000215875.4	+	transcribed_processed_pseudogene	KNOWN	ST13P20	1	2	-0.111292
chr1	81990753	81990806	81990779	ENSG00000274207.1	+	miRNA	NOVEL	AC113949.1	1	1	-0.502016
chr1	82215220	82261133	82238176	ENSG00000233290.1	-	lincRNA	KNOWN	RP11-147G16.1	1	2	-0.424507
chr1	82660030	82660119	82660074	ENSG00000277664.1	+	miRNA	NOVEL	AL357973.1	1	1	-0.350791
chr1	82903183	83166815	83034999	ENSG00000230817.5	+	lincRNA	KNOWN	LINC01362	2	11	-0.514641
chr1	82973882	82986208	82980045	ENSG00000236268.5	-	lincRNA	KNOWN	LINC01361	2	3	-0.500706
chr1	83445967	83462687	83454327	ENSG00000231364.2	+	lincRNA	KNOWN	RP11-413G15.1	1	3	-0.510885
chr1	83575776	83861023	83718399	ENSG00000233008.5	-	lincRNA	KNOWN	RP11-475O6.1	5	3	-0.362763
chr1	83790280	83801465	83795872	ENSG00000237076.1	+	lincRNA	KNOWN	RP5-836J3.1	1	3	-0.323046
chr1	83865028	83999150	83932089	ENSG00000137941.16	-	protein_coding	KNOWN	TTLL7	14	28	-0.302264
chr1	83979118	83984300	83981709	ENSG00000233061.1	-	sense_intronic	KNOWN	TTLL7-IT1	1	2	-0.521950
chr1	84015865	84018371	84017118	ENSG00000229486.2	-	processed_pseudogene	KNOWN	RP4-552O12.1	1	5	-0.615367
chr1	84076331	84077931	84077131	ENSG00000271576.1	-	lincRNA	KNOWN	RP11-486G15.2	1	1	-0.193680
chr1	84078062	84238498	84158280	ENSG00000142875.19	+	protein_coding	KNOWN	PRKACB	19	13	-0.245855
chr1	84085741	84086233	84085987	ENSG00000213540.3	+	processed_pseudogene	KNOWN	RP11-486G15.1	1	1	-0.193680
chr1	84152387	84152458	84152422	ENSG00000266671.3	+	miRNA	NOVEL	AL450063.1	1	1	-0.090600
chr1	84244334	84244577	84244455	ENSG00000226970.2	+	processed_pseudogene	KNOWN	RP11-82H13.2	1	1	-0.171043
chr1	84277321	84277457	84277389	ENSG00000199959.1	+	snoRNA	NOVEL	SNORA2	1	1	0.152292
chr1	84298366	84389957	84344161	ENSG00000203943.8	+	protein_coding	KNOWN	SAMD13	9	4	-0.031232
chr1	84344678	84349939	84347308	ENSG00000249237.5	+	unitary_pseudogene	KNOWN	RP11-376N17.4	3	2	0.099985
chr1	84365428	84397831	84381629	ENSG00000240520.5	-	unitary_pseudogene	KNOWN	UOX	2	8	0.024805
chr1	84398532	84415018	84406775	ENSG00000137976.7	+	protein_coding	KNOWN	DNASE2B	2	6	-0.144093
chr1	84479259	84497790	84488524	ENSG00000117133.10	+	protein_coding	KNOWN	RPF1	2	9	-0.243497
chr1	84498325	84506565	84502445	ENSG00000174021.10	-	protein_coding	KNOWN	GNG5	3	4	-0.008809
chr1	84506291	84566194	84536242	ENSG00000122432.16	+	transcribed_unprocessed_pseudogene	KNOWN	SPATA1	9	12	0.023777
chr1	84549606	84574480	84562043	ENSG00000117151.12	-	protein_coding	KNOWN	CTBS	4	7	0.131474
chr1	84628230	84635020	84631625	ENSG00000180869.4	-	lincRNA	KNOWN	LINC01555	1	3	0.258599
chr1	84636158	84637106	84636632	ENSG00000232622.1	-	processed_pseudogene	KNOWN	RP11-484D4.3	1	2	0.282598
chr1	84643707	84690803	84667255	ENSG00000117155.16	-	protein_coding	KNOWN	SSX2IP	10	16	0.009161
chr1	84793068	84793199	84793133	ENSG00000251899.1	-	miRNA	NOVEL	AC104169.1	1	1	-0.002130
chr1	84811602	84893213	84852407	ENSG00000171517.5	-	protein_coding	KNOWN	LPAR3	3	3	0.039092
chr1	84925583	84997113	84961348	ENSG00000153898.12	-	protein_coding	KNOWN	MCOLN2	6	14	0.100478
chr1	84999147	85133138	85066142	ENSG00000162643.12	+	protein_coding	KNOWN	WDR63	6	23	-0.070553
chr1	85018082	85048499	85033290	ENSG00000055732.12	-	protein_coding	KNOWN	MCOLN3	6	13	-0.130436
chr1	85133794	85133873	85133833	ENSG00000266110.1	+	miRNA	KNOWN	MIR4423	1	1	0.241840
chr1	85152487	85154203	85153345	ENSG00000280099.1	-	TEC	KNOWN	RP11-33E12.2	1	1	0.030263
chr1	85156873	85201046	85178959	ENSG00000097096.8	-	protein_coding	KNOWN	SYDE2	2	7	-0.009737
chr1	85249953	85259672	85254812	ENSG00000162642.13	-	protein_coding	KNOWN	C1orf52	4	4	0.279572
chr1	85264296	85264402	85264349	ENSG00000223254.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.281594
chr1	85266248	85277090	85271669	ENSG00000142867.12	-	protein_coding	KNOWN	BCL10	2	4	0.142410
chr1	85276715	85448124	85362419	ENSG00000223653.5	+	antisense	KNOWN	RP11-131L23.1	2	5	0.164671
chr1	85284610	85284673	85284641	ENSG00000264380.1	+	miRNA	NOVEL	AL590113.1	1	1	0.068784
chr1	85318481	85578363	85448422	ENSG00000153904.18	-	protein_coding	KNOWN	DDAH1	6	7	0.213942
chr1	85435175	85435284	85435229	ENSG00000199459.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.176384
chr1	85467295	85467660	85467477	ENSG00000273264.1	+	lincRNA	KNOWN	RP11-131L23.2	1	1	0.323662
chr1	85482281	85578250	85530265	ENSG00000282057.1	-	lincRNA	KNOWN	RP4-621F18.2	5	4	0.275340
chr1	85578500	85578742	85578621	ENSG00000272691.1	-	lincRNA	KNOWN	RP11-290M5.4	1	1	0.537551
chr1	85580761	85583962	85582361	ENSG00000142871.15	+	protein_coding	KNOWN	CYR61	3	7	0.537551
chr1	85592280	85592356	85592318	ENSG00000199934.1	+	snoRNA	NOVEL	SNORD81	1	1	0.721429
chr1	85599131	85600734	85599932	ENSG00000230285.1	+	lincRNA	KNOWN	RP11-290M5.2	1	2	0.721429
chr1	85649423	85708433	85678928	ENSG00000117174.10	-	protein_coding	KNOWN	ZNHIT6	2	11	0.007209
chr1	85729233	86156943	85943088	ENSG00000171502.14	-	protein_coding	KNOWN	COL24A1	5	60	-0.290146
chr1	85883680	85883798	85883739	ENSG00000201620.1	-	rRNA	KNOWN	RNA5SP51	1	1	-0.247214
chr1	86029854	86030589	86030221	ENSG00000229505.1	+	processed_pseudogene	KNOWN	RP4-682E18.1	1	1	-0.608804
chr1	86346824	86396342	86371583	ENSG00000122417.15	-	protein_coding	KNOWN	ODF2L	22	18	-0.144250
chr1	86357632	86357687	86357659	ENSG00000278281.1	-	miRNA	KNOWN	MIR7856	1	1	0.110851
chr1	86404176	86404866	86404521	ENSG00000231349.2	-	processed_pseudogene	KNOWN	RP11-444C12.1	1	1	-0.421269
chr1	86424086	86456558	86440322	ENSG00000137975.7	+	protein_coding	KNOWN	CLCA2	3	14	-0.138355
chr1	86468368	86500289	86484328	ENSG00000016490.15	+	protein_coding	KNOWN	CLCA1	2	15	-0.397990
chr1	86547078	86580754	86563916	ENSG00000016602.9	+	protein_coding	KNOWN	CLCA4	2	14	-0.399834
chr1	86552625	86553342	86552983	ENSG00000224466.1	-	processed_pseudogene	KNOWN	CDCA4P2	1	1	-0.309213
chr1	86571181	86693203	86632192	ENSG00000236915.1	-	antisense	KNOWN	RP4-651E10.4	1	4	-0.327201
chr1	86606273	86606361	86606317	ENSG00000221702.3	-	miRNA	NOVEL	AL356270.1	1	1	-0.496377
chr1	86634273	86655376	86644824	ENSG00000153923.10	+	transcribed_unprocessed_pseudogene	KNOWN	CLCA3P	3	15	-0.116913
chr1	86703502	86704462	86703982	ENSG00000261737.1	-	antisense	KNOWN	RP4-612B15.3	1	1	-0.353246
chr1	86704570	86748184	86726377	ENSG00000097033.14	+	protein_coding	KNOWN	SH3GLB1	5	11	-0.241819
chr1	86784913	86785467	86785190	ENSG00000230721.1	+	processed_pseudogene	KNOWN	RP4-612B15.2	1	1	-0.007544
chr1	86862445	86914424	86888434	ENSG00000183291.15	-	protein_coding	KNOWN	SEP15	8	6	0.017404
chr1	86914648	87109998	87012323	ENSG00000153936.16	+	protein_coding	KNOWN	HS2ST1	3	7	-0.201629
chr1	86932199	86934891	86933545	ENSG00000267734.1	-	antisense	KNOWN	RP4-604K5.3	1	2	-0.237072
chr1	86952923	86953016	86952969	ENSG00000280842.1	+	miRNA	NOVEL	AL121989.1	1	1	-0.143896
chr1	86993009	87169204	87081106	ENSG00000267561.2	+	protein_coding	KNOWN	RP5-1052I5.2	1	8	-0.149629
chr1	87044935	87045871	87045403	ENSG00000235251.2	-	processed_pseudogene	KNOWN	RP11-384B12.2	1	1	-0.302028
chr1	87045875	87046700	87046287	ENSG00000225568.1	+	processed_pseudogene	KNOWN	RP11-384B12.3	1	1	-0.302028
chr1	87129765	87169198	87149481	ENSG00000267272.5	+	lincRNA	KNOWN	LINC01140	11	4	0.071797
chr1	87151298	87151445	87151371	ENSG00000221222.1	+	miRNA	NOVEL	AL139139.1	1	1	0.007928
chr1	87328468	87348923	87338695	ENSG00000143013.12	+	protein_coding	KNOWN	LMO4	4	5	0.116699
chr1	87353524	87371655	87362589	ENSG00000227290.1	-	lincRNA	KNOWN	LINC01364	1	4	-0.030621
chr1	87453240	87453373	87453306	ENSG00000199318.1	-	rRNA	KNOWN	RNA5SP52	1	1	0.026403
chr1	87805286	87808372	87806829	ENSG00000279778.1	-	TEC	KNOWN	RP11-60A14.1	1	1	0.100120
chr1	87899909	87905714	87902811	ENSG00000224235.1	-	lincRNA	KNOWN	RP5-1027O11.1	1	3	-0.073594
chr1	88313153	88313302	88313227	ENSG00000270507.1	+	processed_pseudogene	KNOWN	CTA-21C21.1	1	1	-0.630023
chr1	88477828	88478114	88477971	ENSG00000239504.3	-	misc_RNA	KNOWN	RN7SL583P	1	1	-0.039253
chr1	88498309	88498676	88498492	ENSG00000230053.2	-	processed_pseudogene	KNOWN	RP11-76N22.1	1	1	-0.172980
chr1	88520000	88520170	88520085	ENSG00000274321.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.916182
chr1	88537513	88685204	88611358	ENSG00000237505.6	-	antisense	KNOWN	PKN2-AS1	2	4	-0.459032
chr1	88577880	88578201	88578040	ENSG00000237959.1	+	processed_pseudogene	KNOWN	RPL36AP10	1	1	-0.821025
chr1	88684222	88836255	88760238	ENSG00000065243.18	+	protein_coding	KNOWN	PKN2	7	22	-0.272504
chr1	88816779	88816885	88816832	ENSG00000207234.1	+	snRNA	KNOWN	RNU6-125P	1	1	-0.204990
chr1	88829102	88829419	88829260	ENSG00000241975.1	+	processed_pseudogene	KNOWN	TCEB1P19	1	1	-0.204990
chr1	88852932	88891944	88872438	ENSG00000137947.11	-	protein_coding	KNOWN	GTF2B	7	7	-0.118108
chr1	88923370	88923844	88923607	ENSG00000235308.1	+	processed_pseudogene	KNOWN	RP11-82K18.2	1	1	-0.145047
chr1	88935773	88992953	88964363	ENSG00000137944.16	-	protein_coding	KNOWN	CCBL2	5	14	-0.227052
chr1	88979456	88992960	88986208	ENSG00000213516.9	-	protein_coding	KNOWN	RBMXL1	3	3	-0.342063
chr1	89006666	89022894	89014780	ENSG00000117226.11	-	protein_coding	KNOWN	GBP3	11	12	0.015350
chr1	89020246	89020365	89020305	ENSG00000202385.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.037884
chr1	89052319	89065360	89058839	ENSG00000117228.9	-	protein_coding	KNOWN	GBP1	8	11	-0.223210
chr1	89104285	89104767	89104526	ENSG00000234518.2	-	processed_pseudogene	KNOWN	PTGES3P1	1	1	-0.452329
chr1	89106132	89150456	89128294	ENSG00000162645.12	-	protein_coding	KNOWN	GBP2	4	15	-0.362087
chr1	89131751	89176040	89153895	ENSG00000213512.1	-	protein_coding	KNOWN	GBP7	1	11	-0.201726
chr1	89181148	89198932	89190040	ENSG00000162654.8	-	protein_coding	KNOWN	GBP4	3	11	-0.174576
chr1	89258950	89272804	89265877	ENSG00000154451.14	-	protein_coding	KNOWN	GBP5	5	11	-0.186309
chr1	89260582	89269754	89265168	ENSG00000237568.1	+	antisense	KNOWN	RP4-620F22.2	1	2	-0.210856
chr1	89289676	89290337	89290006	ENSG00000238081.1	-	processed_pseudogene	KNOWN	RP4-620F22.3	1	1	-0.168709
chr1	89324522	89334880	89329701	ENSG00000233235.1	+	unprocessed_pseudogene	KNOWN	RP5-908D6.1	1	4	-0.313244
chr1	89364058	89386461	89375259	ENSG00000183347.14	+	protein_coding	KNOWN	GBP6	1	11	-0.207759
chr1	89394033	89394665	89394349	ENSG00000215874.3	+	processed_pseudogene	KNOWN	CAPNS1P1	1	1	-0.407854
chr1	89407679	89426243	89416961	ENSG00000225492.6	+	transcribed_unprocessed_pseudogene	KNOWN	GBP1P1	2	9	-0.389760
chr1	89524836	89597864	89561350	ENSG00000197147.12	+	protein_coding	KNOWN	LRRC8B	4	6	-0.406888
chr1	89583241	89632894	89608067	ENSG00000231999.6	-	antisense	KNOWN	FLJ27354	4	5	-0.192974
chr1	89629725	89676386	89653055	ENSG00000230735.1	+	sense_intronic	KNOWN	RP11-413E1.4	1	4	-0.303970
chr1	89633072	89769903	89701487	ENSG00000171488.14	+	protein_coding	KNOWN	LRRC8C	4	4	-0.097165
chr1	89633140	89933250	89783195	ENSG00000271949.1	+	protein_coding	KNOWN	RP11-302M6.4	1	4	-0.020713
chr1	89661212	89661353	89661282	ENSG00000226394.2	-	processed_pseudogene	KNOWN	RP11-413E1.2	1	1	-0.240278
chr1	89788914	89790492	89789703	ENSG00000231613.1	+	sense_intronic	KNOWN	RP5-943J3.1	1	2	-0.126791
chr1	89820174	89820868	89820521	ENSG00000272931.1	-	lincRNA	KNOWN	RP5-943J3.2	1	1	0.143131
chr1	89821014	89936611	89878812	ENSG00000171492.14	+	protein_coding	KNOWN	LRRC8D	7	4	0.075278
chr1	89939601	89940147	89939874	ENSG00000272672.1	+	lincRNA	KNOWN	RP11-302M6.5	1	1	0.143654
chr1	89987713	89987944	89987828	ENSG00000252797.1	-	misc_RNA	KNOWN	RN7SKP272	1	1	-0.295565
chr1	89993593	89994321	89993957	ENSG00000228175.3	-	processed_pseudogene	KNOWN	GEMIN8P4	1	1	0.435400
chr1	89995112	90035531	90015321	ENSG00000162664.16	+	protein_coding	KNOWN	ZNF326	4	12	-0.144143
chr1	90253456	90253559	90253507	ENSG00000212459.1	-	snRNA	KNOWN	RNU6-695P	1	1	-0.266903
chr1	90510910	90533472	90522191	ENSG00000229201.1	-	lincRNA	KNOWN	RP5-827O9.1	1	4	-0.504197
chr1	90657750	90657964	90657857	ENSG00000199666.2	+	snoRNA	NOVEL	U3	1	1	-0.408906
chr1	90711539	90717237	90714388	ENSG00000143032.7	-	protein_coding	KNOWN	BARHL2	1	3	0.195943
chr1	90782983	90851657	90817320	ENSG00000233593.7	-	lincRNA	KNOWN	RP4-665J23.1	6	5	-0.115201
chr1	90851759	90855253	90853506	ENSG00000225446.2	+	lincRNA	KNOWN	RP4-665J23.2	1	2	-0.197515
chr1	90860550	90862920	90861735	ENSG00000272094.1	-	lincRNA	KNOWN	RP4-665J23.4	1	2	-0.197515
chr1	90892992	90893612	90893302	ENSG00000232882.1	-	processed_pseudogene	KNOWN	PHKA1P1	1	1	-0.159547
chr1	90915298	91022272	90968785	ENSG00000122482.20	-	protein_coding	KNOWN	ZNF644	12	6	-0.267949
chr1	91023919	91024804	91024361	ENSG00000232393.1	+	processed_pseudogene	KNOWN	RPL5P6	1	1	-0.157368
chr1	91260766	91404869	91332817	ENSG00000162669.15	-	protein_coding	KNOWN	HFM1	9	39	-0.335213
chr1	91261625	91261724	91261674	ENSG00000206817.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.423650
chr1	91328369	91329513	91328941	ENSG00000215873.2	+	processed_pseudogene	KNOWN	FEN1P1	1	1	-0.538774
chr1	91500893	91525764	91513328	ENSG00000097046.12	+	protein_coding	KNOWN	CDC7	5	12	-0.331307
chr1	91534666	91535593	91535129	ENSG00000241318.3	-	processed_pseudogene	KNOWN	WDR82P2	1	1	-0.320504
chr1	91600171	91600321	91600246	ENSG00000229067.1	+	processed_pseudogene	KNOWN	RP11-91I11.1	1	1	0.450623
chr1	91642516	91644082	91643299	ENSG00000203914.4	+	processed_pseudogene	KNOWN	HSP90B3P	1	1	0.135493
chr1	91680343	91906335	91793339	ENSG00000069702.10	-	protein_coding	KNOWN	TGFBR3	11	20	0.089706
chr1	91829774	91830066	91829920	ENSG00000239794.3	-	misc_RNA	KNOWN	RN7SL653P	1	1	0.000083
chr1	91949371	92014426	91981898	ENSG00000137948.18	+	protein_coding	KNOWN	BRDT	21	20	-0.207543
chr1	92029982	92063536	92046759	ENSG00000172031.6	+	protein_coding	KNOWN	EPHX4	2	7	-0.283222
chr1	92066306	92067839	92067072	ENSG00000233228.1	+	unitary_pseudogene	KNOWN	LPCAT2BP	1	1	-0.403139
chr1	92074533	92075441	92074987	ENSG00000230667.5	-	protein_coding	KNOWN	SETSIP	2	1	-0.342636
chr1	92080305	92147836	92114070	ENSG00000189195.9	+	protein_coding	KNOWN	BTBD8	2	9	-0.256794
chr1	92114803	92115796	92115299	ENSG00000224678.3	-	processed_pseudogene	KNOWN	GAPDHP46	1	1	-0.396199
chr1	92125301	92126462	92125881	ENSG00000233401.1	+	processed_pseudogene	KNOWN	PRKAR1AP	1	1	-0.396199
chr1	92167052	92184723	92175887	ENSG00000069712.10	+	protein_coding	KNOWN	KIAA1107	1	9	-0.339260
chr1	92189237	92190707	92189972	ENSG00000273487.1	+	lincRNA	KNOWN	RP4-621B10.8	1	2	-0.362057
chr1	92203148	92203991	92203569	ENSG00000226773.1	+	processed_pseudogene	KNOWN	RP4-775D17.1	1	1	-0.308546
chr1	92217940	92245813	92231876	ENSG00000203910.8	+	protein_coding	KNOWN	C1orf146	2	7	-0.072599
chr1	92229018	92229435	92229226	ENSG00000233125.3	-	processed_pseudogene	KNOWN	ACTBP12	1	1	-0.070738
chr1	92229256	92229339	92229297	ENSG00000265543.1	-	miRNA	NOVEL	AL451010.1	1	1	-0.070738
chr1	92246402	92298987	92272694	ENSG00000174842.16	-	protein_coding	KNOWN	GLMN	6	19	-0.255625
chr1	92298965	92402056	92350510	ENSG00000122484.8	+	protein_coding	KNOWN	RPAP2	3	13	-0.278301
chr1	92402389	92402685	92402537	ENSG00000242764.3	-	misc_RNA	KNOWN	RN7SL824P	1	1	-0.227998
chr1	92474762	92486876	92480819	ENSG00000162676.11	-	protein_coding	KNOWN	GFI1	4	7	-0.351927
chr1	92508696	92792404	92650550	ENSG00000067208.14	-	protein_coding	KNOWN	EVI5	8	19	-0.092931
chr1	92580476	92580821	92580648	ENSG00000223787.2	-	processed_pseudogene	KNOWN	RP4-593M8.1	1	1	-0.165609
chr1	92647048	92647630	92647339	ENSG00000229992.1	-	processed_pseudogene	KNOWN	HMGB3P9	1	1	-0.319986
chr1	92700819	92700934	92700876	ENSG00000201317.1	-	snRNA	KNOWN	RNU4-59P	1	1	-0.082783
chr1	92732000	92733257	92732628	ENSG00000225505.1	+	processed_pseudogene	KNOWN	RP11-330C7.3	1	2	-0.126188
chr1	92749175	92749330	92749252	ENSG00000234202.2	-	processed_pseudogene	KNOWN	RP11-330C7.4	1	1	-0.126188
chr1	92755794	92756956	92756375	ENSG00000223896.2	+	processed_pseudogene	KNOWN	CCNJP2	1	1	-0.024150
chr1	92832025	92841924	92836974	ENSG00000122406.12	+	protein_coding	KNOWN	RPL5	5	8	0.345440
chr1	92832737	92961522	92897129	ENSG00000154511.11	-	protein_coding	KNOWN	FAM69A	5	5	0.024456
chr1	92837289	92837383	92837336	ENSG00000206680.1	+	snoRNA	KNOWN	SNORD21	1	1	0.345440
chr1	92840719	92840851	92840785	ENSG00000207523.1	+	snoRNA	KNOWN	SNORA66	1	1	0.345440
chr1	92846059	92846182	92846120	ENSG00000207022.1	+	snoRNA	NOVEL	SNORA51	1	1	0.345440
chr1	92930696	92934098	92932397	ENSG00000229052.2	+	transcribed_processed_pseudogene	KNOWN	RP11-386I23.1	2	2	-0.116250
chr1	92969604	92969710	92969657	ENSG00000252121.1	-	snRNA	KNOWN	RNU6-970P	1	1	-0.053686
chr1	92974827	92975114	92974970	ENSG00000239710.3	-	misc_RNA	KNOWN	RN7SL692P	1	1	0.295084
chr1	93010257	93010351	93010304	ENSG00000252752.1	+	snRNA	KNOWN	RNU6-210P	1	1	-0.096770
chr1	93026252	93026542	93026397	ENSG00000222664.1	+	misc_RNA	KNOWN	RN7SKP123	1	1	-0.096770
chr1	93027410	93027506	93027458	ENSG00000251837.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.096770
chr1	93079235	93139081	93109158	ENSG00000143033.17	+	protein_coding	KNOWN	MTF2	14	16	0.019990
chr1	93149742	93180728	93165235	ENSG00000117500.12	-	protein_coding	KNOWN	TMED5	5	5	0.129790
chr1	93179919	93278730	93229324	ENSG00000122483.17	+	protein_coding	KNOWN	CCDC18	10	29	-0.181818
chr1	93190740	93191060	93190900	ENSG00000237003.1	-	processed_pseudogene	KNOWN	RP4-612C19.1	1	1	-0.134779
chr1	93199755	93199939	93199847	ENSG00000225297.1	-	processed_pseudogene	KNOWN	RP4-612C19.2	1	1	-0.134779
chr1	93262186	93346025	93304105	ENSG00000223745.7	-	processed_transcript	KNOWN	RP4-717I23.3	24	11	-0.007108
chr1	93278961	93279129	93279045	ENSG00000229567.1	-	processed_pseudogene	KNOWN	RP4-717I23.2	1	1	0.251058
chr1	93345888	93369498	93357693	ENSG00000117505.12	+	protein_coding	KNOWN	DR1	3	4	0.013576
chr1	93384487	93384998	93384742	ENSG00000229635.1	-	processed_pseudogene	KNOWN	RP4-713B5.2	1	1	-0.027918
chr1	93385711	93385817	93385764	ENSG00000207379.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.027918
chr1	93448131	93554661	93501396	ENSG00000137942.16	+	protein_coding	KNOWN	FNBP1L	6	17	-0.129128
chr1	93488333	93488452	93488392	ENSG00000212601.1	-	rRNA	KNOWN	RNA5SP53	1	1	-0.405914
chr1	93561786	93847150	93704468	ENSG00000137936.16	-	protein_coding	KNOWN	BCAR3	10	14	0.290992
chr1	93592199	93605573	93598886	ENSG00000224093.5	+	antisense	KNOWN	RP5-1033H22.2	5	3	0.449948
chr1	93752924	93775444	93764184	ENSG00000230439.2	-	sense_intronic	KNOWN	RP11-488P3.1	1	2	0.076871
chr1	93846810	93846917	93846863	ENSG00000211575.2	+	miRNA	KNOWN	MIR760	1	1	0.399814
chr1	93847174	93848939	93848056	ENSG00000260464.1	+	lincRNA	KNOWN	RP4-561L24.3	1	1	0.399814
chr1	93866283	93879918	93873100	ENSG00000067334.13	-	protein_coding	KNOWN	DNTTIP2	7	7	0.379570
chr1	93885205	93909456	93897330	ENSG00000023909.9	-	protein_coding	KNOWN	GCLM	4	7	0.188453
chr1	93921268	93921667	93921467	ENSG00000223490.2	-	processed_pseudogene	KNOWN	CHCHD2P5	1	1	0.082714
chr1	93922574	93923945	93923259	ENSG00000234099.1	-	unprocessed_pseudogene	KNOWN	MTND4P11	1	2	0.082714
chr1	93924386	93924716	93924551	ENSG00000235794.1	-	unprocessed_pseudogene	KNOWN	RP5-837O21.6	1	1	0.082714
chr1	93924743	93925385	93925064	ENSG00000232752.1	-	unprocessed_pseudogene	KNOWN	RP5-837O21.5	1	1	0.082714
chr1	93925406	93926072	93925739	ENSG00000229842.2	-	unprocessed_pseudogene	KNOWN	RP5-837O21.4	1	1	0.082714
chr1	93926032	93926188	93926110	ENSG00000250890.1	-	unprocessed_pseudogene	KNOWN	RP5-837O21.8	1	1	0.082714
chr1	93926615	93927569	93927092	ENSG00000236689.1	-	unprocessed_pseudogene	KNOWN	RP5-837O21.3	1	2	0.082714
chr1	93927714	93928302	93928008	ENSG00000226960.1	-	unprocessed_pseudogene	KNOWN	MTCO1P21	1	1	0.082714
chr1	93934479	93935244	93934861	ENSG00000233129.1	-	processed_pseudogene	KNOWN	RP5-837O21.2	1	1	-0.192576
chr1	93992835	94121132	94056983	ENSG00000198691.11	-	protein_coding	KNOWN	ABCA4	7	50	0.359675
chr1	94145111	94145619	94145365	ENSG00000233482.1	+	antisense	KNOWN	RP11-78O9.1	1	2	0.318268
chr1	94148988	94275068	94212028	ENSG00000137962.12	-	protein_coding	KNOWN	ARHGAP29	5	26	0.082109
chr1	94150738	94151080	94150909	ENSG00000264963.2	+	misc_RNA	KNOWN	RN7SL440P	1	1	-0.027590
chr1	94247866	94334848	94291357	ENSG00000226835.2	+	lincRNA	KNOWN	RP11-148B18.1	2	5	0.177580
chr1	94302038	94303022	94302530	ENSG00000178596.10	+	processed_pseudogene	KNOWN	GAPDHP29	1	1	0.076479
chr1	94318479	94324569	94321524	ENSG00000236098.1	-	lincRNA	KNOWN	RP11-148B18.4	1	2	0.364723
chr1	94406395	94406882	94406638	ENSG00000232918.2	-	processed_pseudogene	KNOWN	RP11-366L18.1	1	1	-0.042494
chr1	94418455	94518666	94468560	ENSG00000117528.11	+	protein_coding	KNOWN	ABCD3	6	23	-0.043112
chr1	94529225	94541800	94535512	ENSG00000117525.13	-	protein_coding	KNOWN	F3	4	6	0.371059
chr1	94585556	94592297	94588926	ENSG00000223675.1	-	lincRNA	KNOWN	RP11-86H7.6	1	2	0.444321
chr1	94613814	94855426	94734620	ENSG00000224081.8	-	transcribed_processed_pseudogene	KNOWN	LINC01057	19	7	0.310125
chr1	94650544	94651378	94650961	ENSG00000232857.2	-	processed_pseudogene	KNOWN	KATNBL1P2	1	1	0.441576
chr1	94676302	94676409	94676355	ENSG00000274778.1	+	miRNA	NOVEL	AC093117.1	1	1	0.244762
chr1	94745860	94745900	94745880	ENSG00000263526.1	-	miRNA	KNOWN	MIR378G	1	1	0.615211
chr1	94820342	94895246	94857794	ENSG00000143036.16	+	protein_coding	KNOWN	SLC44A3	10	15	0.135718
chr1	94896949	94927278	94912113	ENSG00000117519.15	-	protein_coding	KNOWN	CNN3	7	7	0.175333
chr1	94927566	94963270	94945418	ENSG00000235501.5	+	antisense	KNOWN	RP4-639F20.1	3	4	0.228033
chr1	94974407	95072945	95023676	ENSG00000172339.9	-	protein_coding	KNOWN	ALG14	3	4	0.169152
chr1	95061596	95067545	95064570	ENSG00000230427.1	+	antisense	KNOWN	RP11-313A24.1	1	2	-0.021537
chr1	95117338	95197607	95157472	ENSG00000152078.9	+	protein_coding	KNOWN	TMEM56	4	7	-0.407835
chr1	95117923	95247225	95182574	ENSG00000271092.5	+	protein_coding	KNOWN	TMEM56-RWDD3	2	8	-0.315818
chr1	95120147	95138554	95129350	ENSG00000231992.1	+	sense_intronic	KNOWN	RP11-57H12.2	1	2	-0.290250
chr1	95125511	95125609	95125560	ENSG00000206679.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.386055
chr1	95163219	95233982	95198600	ENSG00000226026.5	-	antisense	KNOWN	RP11-57H12.3	2	4	-0.288232
chr1	95234155	95247225	95240690	ENSG00000122481.16	+	protein_coding	KNOWN	RWDD3	7	5	-0.134601
chr1	95243167	95278940	95261053	ENSG00000228852.6	-	antisense	KNOWN	RP11-57H12.5	6	4	-0.120351
chr1	95310928	95318263	95314595	ENSG00000228504.1	-	lincRNA	KNOWN	RP4-586O15.1	1	2	-0.419348
chr1	95351251	95352254	95351752	ENSG00000230434.1	-	lincRNA	KNOWN	RP11-14O19.1	1	2	-0.472622
chr1	95356229	95381000	95368614	ENSG00000237954.7	-	lincRNA	KNOWN	RP11-14O19.2	2	4	-0.346524
chr1	95474737	95479356	95477046	ENSG00000233907.1	+	lincRNA	KNOWN	FLJ31662	1	4	-0.518062
chr1	95504976	95505063	95505019	ENSG00000216037.1	-	miRNA	NOVEL	AL356479.1	1	1	-0.238925
chr1	95510116	95782342	95646229	ENSG00000228971.2	+	lincRNA	KNOWN	RP11-286B14.1	3	4	-0.420999
chr1	95743096	95759470	95751283	ENSG00000271252.1	+	lincRNA	KNOWN	RP11-286B14.2	1	2	-0.580678
chr1	95886540	95886626	95886583	ENSG00000221798.1	+	miRNA	NOVEL	AC092812.1	1	1	-0.258505
chr1	95937901	96022880	95980390	ENSG00000237435.9	+	lincRNA	KNOWN	RP11-147C23.1	18	6	-0.766227
chr1	96225901	96226060	96225980	ENSG00000200800.1	+	snRNA	KNOWN	RNU1-130P	1	1	-0.771947
chr1	96254069	96374125	96314097	ENSG00000231987.1	-	lincRNA	KNOWN	RP5-898J17.1	1	6	-0.429629
chr1	96390652	96391393	96391022	ENSG00000225923.1	+	processed_pseudogene	KNOWN	RP4-736I12.1	1	1	-0.564054
chr1	96418594	96418933	96418763	ENSG00000234422.1	+	processed_pseudogene	KNOWN	UBE2WP1	1	1	-0.606500
chr1	96446930	96448318	96447624	ENSG00000228502.1	+	processed_pseudogene	KNOWN	EEF1A1P11	1	1	-0.255932
chr1	96583209	96583527	96583368	ENSG00000241992.3	+	misc_RNA	KNOWN	RN7SL831P	1	1	-0.212863
chr1	96584422	96584727	96584574	ENSG00000234226.5	-	processed_pseudogene	KNOWN	NDUFS5P2	1	1	-0.212863
chr1	96678874	96679620	96679247	ENSG00000137970.7	-	processed_pseudogene	KNOWN	RPL7P9	1	1	-0.444061
chr1	96695856	96696167	96696011	ENSG00000223229.1	-	misc_RNA	KNOWN	RN7SKP270	1	1	-0.609350
chr1	96721665	96823738	96772701	ENSG00000117569.18	+	protein_coding	KNOWN	PTBP2	11	14	-0.188831
chr1	96902699	96902792	96902745	ENSG00000212039.1	+	miRNA	NOVEL	AL592205.1	1	1	-0.412239
chr1	96935545	96935663	96935604	ENSG00000265771.1	+	miRNA	NOVEL	AL592205.2	1	1	-0.263339
chr1	97077743	97921049	97499396	ENSG00000188641.12	-	protein_coding	KNOWN	DPYD	4	23	-0.331419
chr1	97095923	97322955	97209439	ENSG00000232878.3	+	antisense	KNOWN	DPYD-AS1	3	5	-0.302587
chr1	97394154	97420141	97407147	ENSG00000232542.1	-	sense_intronic	KNOWN	DPYD-IT1	1	2	-0.365600
chr1	97545701	97546958	97546329	ENSG00000228057.1	+	processed_pseudogene	KNOWN	SEC63P1	1	1	-0.519443
chr1	97585862	97586294	97586078	ENSG00000226128.1	+	processed_pseudogene	KNOWN	RPL26P9	1	1	-0.484358
chr1	97774669	97775026	97774847	ENSG00000230718.1	+	processed_pseudogene	KNOWN	RP11-272L13.2	1	1	-0.407579
chr1	97796921	97798066	97797493	ENSG00000235777.1	+	antisense	KNOWN	DPYD-AS2	2	3	-0.406035
chr1	97855575	97856825	97856200	ENSG00000270911.1	+	processed_pseudogene	KNOWN	RP11-272L13.4	1	1	-0.136540
chr1	97933474	97941746	97937610	ENSG00000269998.1	-	lincRNA	KNOWN	RP11-272L13.3	1	2	-0.007544
chr1	97967005	97968814	97967909	ENSG00000259946.1	-	lincRNA	KNOWN	RP11-490G2.2	1	1	-0.257951
chr1	97986740	98049863	98018301	ENSG00000225206.6	-	lincRNA	KNOWN	MIR137HG	5	5	-0.291738
chr1	98045242	98045351	98045296	ENSG00000276280.1	-	miRNA	KNOWN	MIR2682	1	1	-0.588128
chr1	98046070	98046171	98046120	ENSG00000277990.1	-	miRNA	KNOWN	MIR137	1	1	-0.588128
chr1	98077000	98077468	98077234	ENSG00000233557.2	+	processed_pseudogene	KNOWN	NFU1P2	1	1	-0.541581
chr1	98210747	98272658	98241702	ENSG00000226053.1	+	lincRNA	KNOWN	RP5-1070A16.1	1	3	-0.250104
chr1	98373385	98373499	98373442	ENSG00000221777.1	+	miRNA	NOVEL	AL160056.1	1	1	0.124413
chr1	98660388	98661059	98660723	ENSG00000280040.1	-	TEC	KNOWN	RP11-296E3.2	1	1	0.112312
chr1	98661701	98760500	98711100	ENSG00000162627.16	+	protein_coding	KNOWN	SNX7	5	9	-0.131693
chr1	98890245	99005032	98947638	ENSG00000117598.11	-	protein_coding	KNOWN	PLPPR5	3	6	-0.344849
chr1	99004276	99148852	99076564	ENSG00000232825.1	+	antisense	KNOWN	RP5-896L10.1	1	3	-0.366021
chr1	99008218	99008474	99008346	ENSG00000227034.1	+	processed_pseudogene	KNOWN	RP11-234N17.1	1	1	-0.456901
chr1	99263953	99309590	99286771	ENSG00000117600.12	+	protein_coding	KNOWN	PLPPR4	3	7	-0.544177
chr1	99464378	99464776	99464577	ENSG00000233983.2	+	processed_pseudogene	KNOWN	RP4-735N21.1	1	1	-0.411119
chr1	99472332	99600995	99536663	ENSG00000224445.3	-	lincRNA	KNOWN	RP11-413P11.1	3	5	-0.304898
chr1	99645943	99694541	99670242	ENSG00000099260.10	+	protein_coding	KNOWN	PALMD	5	9	-0.379748
chr1	99698242	99699178	99698710	ENSG00000223656.1	+	processed_pseudogene	KNOWN	HMGB3P10	1	2	-0.375134
chr1	99708703	99766631	99737667	ENSG00000156869.12	-	protein_coding	KNOWN	FRRS1	4	17	-0.404554
chr1	99784740	99784885	99784812	ENSG00000201491.1	-	snRNA	KNOWN	RNU4-75P	1	1	-0.428840
chr1	99791662	99791753	99791707	ENSG00000202254.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.089178
chr1	99842610	99842761	99842685	ENSG00000231996.1	+	processed_pseudogene	KNOWN	RP4-581O6.1	1	1	-0.134601
chr1	99850084	99924023	99887053	ENSG00000162688.15	+	protein_coding	KNOWN	AGL	8	34	-0.223059
chr1	99968383	99969864	99969123	ENSG00000228084.1	-	antisense	KNOWN	RP5-884G6.2	1	2	0.219104
chr1	99969789	100026979	99998384	ENSG00000117620.12	+	protein_coding	KNOWN	SLC35A3	8	9	0.068294
chr1	99978939	99979045	99978992	ENSG00000212248.1	+	snRNA	KNOWN	RNU6-750P	1	1	0.235117
chr1	100000637	100000739	100000688	ENSG00000202259.1	-	snRNA	KNOWN	RNU6-1318P	1	1	-0.032704
chr1	100030566	100035637	100033101	ENSG00000261254.2	+	sense_overlapping	KNOWN	RP4-714D9.5	1	1	-0.126354
chr1	100038097	100083377	100060737	ENSG00000156875.13	+	protein_coding	KNOWN	HIAT1	2	12	0.058363
chr1	100057990	100084471	100071230	ENSG00000241073.1	-	antisense	KNOWN	RP4-714D9.2	1	2	0.154353
chr1	100083563	100132955	100108259	ENSG00000156876.9	-	protein_coding	KNOWN	SASS6	2	17	-0.012936
chr1	100099239	100099490	100099364	ENSG00000226952.1	+	processed_pseudogene	KNOWN	RP4-714D9.4	1	1	-0.080069
chr1	100133150	100150497	100141823	ENSG00000122435.9	+	protein_coding	KNOWN	TRMT13	5	11	0.167734
chr1	100148449	100178273	100163361	ENSG00000122477.12	-	protein_coding	KNOWN	LRRC39	4	11	-0.172215
chr1	100186919	100249834	100218376	ENSG00000137992.14	-	protein_coding	KNOWN	DBT	2	11	0.010709
chr1	100196816	100197051	100196933	ENSG00000271415.1	+	processed_pseudogene	KNOWN	RPL23AP90	1	1	-0.158816
chr1	100213293	100213670	100213481	ENSG00000225169.1	+	processed_pseudogene	KNOWN	BRI3P1	1	1	0.015820
chr1	100249090	100249311	100249200	ENSG00000230287.3	+	processed_pseudogene	KNOWN	RP11-305E17.4	1	1	0.211901
chr1	100264009	100266120	100265064	ENSG00000224616.1	-	antisense	KNOWN	RTCA-AS1	1	4	-0.112022
chr1	100266207	100292769	100279488	ENSG00000137996.12	+	protein_coding	KNOWN	RTCA	5	12	-0.036701
chr1	100281241	100281308	100281274	ENSG00000207750.1	+	miRNA	KNOWN	MIR553	1	1	-0.067075
chr1	100331804	100332617	100332210	ENSG00000215871.2	-	processed_pseudogene	KNOWN	RP5-837M10.1	1	1	-0.427617
chr1	100344477	100345242	100344859	ENSG00000223906.1	+	lincRNA	KNOWN	RP5-837M10.2	1	2	-0.427617
chr1	100345025	100520277	100432651	ENSG00000079335.18	+	protein_coding	KNOWN	CDC14A	6	16	-0.148811
chr1	100378682	100378775	100378728	ENSG00000216067.1	-	miRNA	NOVEL	AC104457.1	1	1	-0.379832
chr1	100393033	100394026	100393529	ENSG00000234332.1	-	processed_pseudogene	KNOWN	BCAS2P2	1	2	-0.224192
chr1	100462399	100485997	100474198	ENSG00000228086.1	-	antisense	KNOWN	RP5-837M10.4	1	2	-0.257152
chr1	100538137	100542018	100540077	ENSG00000181656.6	+	protein_coding	KNOWN	GPR88	1	2	-0.312157
chr1	100586649	100587431	100587040	ENSG00000213421.4	-	processed_pseudogene	KNOWN	RP11-84O12.2	1	1	-0.295669
chr1	100627049	100640613	100633831	ENSG00000230402.2	-	lincRNA	KNOWN	LINC01349	1	3	-0.148637
chr1	100651947	100652267	100652107	ENSG00000224685.1	+	processed_pseudogene	KNOWN	RP11-84O12.3	1	1	-0.076827
chr1	100719742	100739045	100729393	ENSG00000162692.10	+	protein_coding	KNOWN	VCAM1	5	9	-0.487702
chr1	100872372	100895998	100884185	ENSG00000162694.13	-	protein_coding	KNOWN	EXTL2	7	6	-0.210200
chr1	100894928	100895356	100895142	ENSG00000273204.1	+	antisense	KNOWN	RP4-549L20.3	1	1	-0.330100
chr1	100896076	100981753	100938914	ENSG00000162695.11	+	protein_coding	KNOWN	SLC30A7	3	12	-0.145535
chr1	100941017	100941995	100941506	ENSG00000230946.3	-	processed_pseudogene	KNOWN	HNRNPA1P68	1	1	-0.075608
chr1	100989623	101026088	101007855	ENSG00000117543.19	-	protein_coding	KNOWN	DPH5	16	10	-0.063759
chr1	100995473	100996260	100995866	ENSG00000235795.1	+	antisense	KNOWN	RP11-421L21.2	1	2	0.030216
chr1	101025878	101087268	101056573	ENSG00000233184.6	+	antisense	KNOWN	RP11-421L21.3	6	7	-0.300803
chr1	101133153	101133339	101133246	ENSG00000252765.1	+	scaRNA	NOVEL	SCARNA16	1	1	-0.075736
chr1	101133263	101133340	101133301	ENSG00000280622.1	+	miRNA	NOVEL	AC093157.1	1	1	-0.075736
chr1	101190520	101190994	101190757	ENSG00000271578.1	+	processed_pseudogene	KNOWN	RP5-1033H2.1	1	1	0.207469
chr1	101235683	101236528	101236105	ENSG00000225938.1	-	antisense	KNOWN	RP4-575N6.4	1	2	-0.105454
chr1	101236888	101241518	101239203	ENSG00000170989.8	+	protein_coding	KNOWN	S1PR1	3	2	-0.105454
chr1	101243158	101243749	101243453	ENSG00000260940.1	+	sense_overlapping	KNOWN	RP4-575N6.5	1	1	-0.105454
chr1	101256274	101256616	101256445	ENSG00000228399.1	+	processed_pseudogene	KNOWN	RP4-575N6.2	1	1	-0.054557
chr1	101270875	101271363	101271119	ENSG00000173810.9	-	processed_pseudogene	KNOWN	PPIAP7	1	1	0.024088
chr1	101323337	101390303	101356820	ENSG00000231671.1	+	lincRNA	KNOWN	LINC01307	3	5	-0.261485
chr1	101639548	101787572	101713560	ENSG00000226715.2	+	lincRNA	KNOWN	RP11-411H5.1	2	7	-0.507269
chr1	101728642	101728737	101728689	ENSG00000252530.1	-	snRNA	KNOWN	RNU6-965P	1	1	-0.353634
chr1	101786340	101787219	101786779	ENSG00000183298.5	-	processed_pseudogene	KNOWN	RPSAP19	1	1	-0.746545
chr1	101802574	101997030	101899802	ENSG00000118733.16	-	protein_coding	KNOWN	OLFM3	6	7	-0.516955
chr1	101859851	101859957	101859904	ENSG00000252717.1	+	snRNA	KNOWN	RNU6-352P	1	1	-0.609485
chr1	101882516	101882894	101882705	ENSG00000271277.1	+	processed_pseudogene	KNOWN	RP11-82O2.2	1	1	-0.373672
chr1	101893105	101894047	101893576	ENSG00000162699.5	+	processed_pseudogene	KNOWN	DNAJA1P5	1	1	-0.712878
chr1	102199739	102389630	102294684	ENSG00000233359.1	-	lincRNA	KNOWN	RP11-202K23.1	1	6	-0.586510
chr1	102763322	102853842	102808582	ENSG00000230864.1	-	lincRNA	KNOWN	RP5-936J12.1	1	7	-0.247781
chr1	102876467	103108496	102992481	ENSG00000060718.19	-	protein_coding	KNOWN	COL11A1	11	67	-0.187179
chr1	103100143	103100704	103100423	ENSG00000234257.1	-	processed_pseudogene	KNOWN	SOD2P1	1	1	-0.267738
chr1	103414879	103425465	103420172	ENSG00000230759.1	+	lincRNA	KNOWN	RP11-153F1.2	1	2	-0.319986
chr1	103418079	103525483	103471781	ENSG00000224613.6	-	antisense	KNOWN	RP11-153F1.1	2	5	-0.239944
chr1	103523562	103523879	103523720	ENSG00000222069.1	+	misc_RNA	KNOWN	RN7SKP285	1	1	-0.001118
chr1	103525691	103555239	103540465	ENSG00000185946.15	+	protein_coding	KNOWN	RNPC3	9	16	-0.130331
chr1	103553815	103579534	103566674	ENSG00000240038.6	+	protein_coding	KNOWN	AMY2B	8	12	-0.508370
chr1	103569553	103570674	103570113	ENSG00000236085.1	+	processed_pseudogene	KNOWN	ACTG1P4	1	1	-0.547316
chr1	103616811	103625780	103621295	ENSG00000243480.7	+	protein_coding	KNOWN	AMY2A	4	11	-0.551152
chr1	103655290	103664554	103659922	ENSG00000237763.9	+	protein_coding	KNOWN	AMY1A	5	11	-0.571463
chr1	103668071	103668268	103668169	ENSG00000234441.1	-	unprocessed_pseudogene	KNOWN	RP5-1108M17.5	1	1	-0.571463
chr1	103687415	103696680	103692047	ENSG00000174876.16	-	protein_coding	KNOWN	AMY1B	5	11	-0.548129
chr1	103713723	103719871	103716797	ENSG00000227408.1	+	unprocessed_pseudogene	KNOWN	AMYP1	1	7	-0.473605
chr1	103750406	103758690	103754548	ENSG00000187733.6	+	protein_coding	KNOWN	AMY1C	1	10	-0.706105
chr1	103926567	103927806	103927186	ENSG00000225191.1	+	processed_pseudogene	KNOWN	RP11-97C18.1	1	1	-0.406610
chr1	104072983	104226678	104149830	ENSG00000215869.4	+	transcribed_processed_pseudogene	KNOWN	RP11-364B6.2	5	4	-0.501559
chr1	104153272	104153347	104153309	ENSG00000281297.1	+	miRNA	NOVEL	AC092506.1	1	1	-0.547261
chr1	104153306	104153830	104153568	ENSG00000228347.1	-	processed_pseudogene	KNOWN	FTLP17	1	1	-0.547261
chr1	105433994	105434821	105434407	ENSG00000225036.1	+	processed_pseudogene	KNOWN	RP11-414B7.1	1	1	-0.710776
chr1	105587575	105618958	105603266	ENSG00000230768.7	-	lincRNA	KNOWN	RP11-251P6.1	15	6	-0.661418
chr1	105698039	105698218	105698128	ENSG00000227850.1	+	processed_pseudogene	KNOWN	SEPT2P1	1	1	-0.146168
chr1	105890693	105891430	105891061	ENSG00000237897.2	-	processed_pseudogene	KNOWN	RP11-90H3.2	1	2	-0.323046
chr1	105891739	105893517	105892628	ENSG00000232952.1	+	processed_pseudogene	KNOWN	RP11-90H3.1	1	1	-0.323046
chr1	105927624	106028277	105977950	ENSG00000233047.6	-	lincRNA	KNOWN	RP11-24P14.1	6	9	-0.589166
chr1	105956694	106124564	106040629	ENSG00000237480.2	+	lincRNA	KNOWN	RP5-947P14.1	10	8	-0.600319
chr1	106080801	106081379	106081090	ENSG00000230932.2	-	processed_pseudogene	KNOWN	RP5-947P14.2	1	1	-0.678003
chr1	106544342	106544744	106544543	ENSG00000270342.1	-	processed_pseudogene	KNOWN	RP11-478L17.1	1	1	-0.541581
chr1	106780223	106780435	106780329	ENSG00000270976.1	+	processed_pseudogene	KNOWN	RP11-110F24.1	1	1	-0.300326
chr1	106802755	106803427	106803091	ENSG00000233449.1	-	processed_pseudogene	KNOWN	MTATP6P14	1	1	-0.369588
chr1	106804474	106806032	106805253	ENSG00000232551.2	-	processed_pseudogene	KNOWN	MTCO1P14	1	1	-0.369588
chr1	106818239	106838167	106828203	ENSG00000237460.2	+	lincRNA	KNOWN	RP11-233E12.1	1	3	-0.384076
chr1	107056679	107059294	107057986	ENSG00000198890.7	+	protein_coding	KNOWN	PRMT6	1	1	-0.233995
chr1	107140007	107483458	107311732	ENSG00000162631.18	+	protein_coding	KNOWN	NTNG1	11	8	-0.387582
chr1	107505203	107505448	107505325	ENSG00000224550.1	+	processed_pseudogene	KNOWN	RP11-270C12.3	1	1	-0.123737
chr1	107571160	107965144	107768152	ENSG00000134215.15	-	protein_coding	KNOWN	VAV3	15	28	-0.390568
chr1	107897223	107897304	107897263	ENSG00000275455.1	+	miRNA	KNOWN	MIR7852	1	1	-0.119512
chr1	107964443	107994607	107979525	ENSG00000230489.1	+	antisense	KNOWN	VAV3-AS1	1	3	-0.166361
chr1	108018653	108018771	108018712	ENSG00000264753.1	-	miRNA	NOVEL	AL390036.1	1	1	-0.245878
chr1	108040263	108076020	108058141	ENSG00000226822.2	+	lincRNA	KNOWN	RP11-356N1.2	5	5	-0.136879
chr1	108134036	108200849	108167442	ENSG00000085491.15	-	protein_coding	KNOWN	SLC25A24	4	10	0.042120
chr1	108199926	108201491	108200708	ENSG00000260879.1	+	antisense	KNOWN	RP11-483I13.5	1	1	0.342164
chr1	108200413	108202743	108201578	ENSG00000280186.1	+	TEC	KNOWN	RP11-483I13.6	1	1	0.342164
chr1	108223341	108244081	108233711	ENSG00000196427.13	-	protein_coding	KNOWN	NBPF4	2	16	-0.070450
chr1	108261196	108273689	108267442	ENSG00000238122.1	-	lincRNA	KNOWN	RP11-483I13.2	1	2	-0.125821
chr1	108272943	108337853	108305398	ENSG00000241361.8	+	transcribed_unprocessed_pseudogene	KNOWN	SLC25A24P1	2	8	-0.348708
chr1	108375799	108471002	108423400	ENSG00000186086.16	+	protein_coding	KNOWN	NBPF6	5	16	-0.281478
chr1	108375838	108410814	108393326	ENSG00000243967.4	+	transcribed_unprocessed_pseudogene	KNOWN	NBPF5P	2	10	-0.241714
chr1	108383736	108421295	108402515	ENSG00000238118.1	-	unprocessed_pseudogene	KNOWN	SLC25A24P2	1	3	-0.384153
chr1	108420689	108433184	108426936	ENSG00000224698.1	+	lincRNA	KNOWN	RP11-131J3.1	1	2	-0.430288
chr1	108502358	108503455	108502906	ENSG00000227832.1	+	processed_pseudogene	KNOWN	ST13P21	1	1	-0.199348
chr1	108508574	108509243	108508908	ENSG00000226483.2	+	processed_pseudogene	KNOWN	RP5-964H19.2	1	1	-0.199348
chr1	108560089	108644900	108602494	ENSG00000162636.15	+	protein_coding	KNOWN	FAM102B	3	11	-0.104381
chr1	108648290	108661526	108654908	ENSG00000162639.15	-	protein_coding	KNOWN	HENMT1	6	9	-0.037108
chr1	108692323	108701803	108697063	ENSG00000134186.11	+	protein_coding	KNOWN	PRPF38B	5	7	0.074714
chr1	108712657	108742740	108727698	ENSG00000143107.8	+	protein_coding	KNOWN	FNDC7	2	13	0.139388
chr1	108734256	108734725	108734490	ENSG00000232971.2	-	antisense	KNOWN	RP11-293A10.3	1	2	0.044163
chr1	108746674	108809526	108778100	ENSG00000116266.10	+	protein_coding	KNOWN	STXBP3	7	19	0.013590
chr1	108766841	108767584	108767212	ENSG00000228076.2	-	processed_pseudogene	KNOWN	RP11-475E11.2	1	1	0.151934
chr1	108815898	108858228	108837063	ENSG00000162641.18	-	protein_coding	KNOWN	AKNAD1	9	16	0.393282
chr1	108837660	108963484	108900572	ENSG00000274068.1	-	protein_coding	KNOWN	RP11-475E11.9	1	6	0.253492
chr1	108857217	108858524	108857870	ENSG00000203897.3	+	antisense	KNOWN	SPATA42	2	3	0.329789
chr1	108875350	108934545	108904947	ENSG00000121957.12	+	protein_coding	KNOWN	GPSM2	6	16	0.130333
chr1	108929508	108963457	108946482	ENSG00000121940.15	-	protein_coding	KNOWN	CLCC1	9	12	0.237937
chr1	108970214	109042113	109006163	ENSG00000085433.15	-	protein_coding	KNOWN	WDR47	9	15	0.147289
chr1	108986963	108987245	108987104	ENSG00000237349.1	-	processed_pseudogene	KNOWN	RP5-1065J22.2	1	1	-0.050809
chr1	108992282	108992836	108992559	ENSG00000244716.3	+	processed_pseudogene	KNOWN	RP11-20O24.4	1	1	0.366852
chr1	109030067	109030319	109030193	ENSG00000228665.2	+	processed_pseudogene	KNOWN	RP11-20O24.1	1	1	0.324653
chr1	109046828	109047482	109047155	ENSG00000228054.2	+	processed_pseudogene	KNOWN	RANP5	1	1	0.324653
chr1	109062486	109076002	109069244	ENSG00000197780.9	-	protein_coding	KNOWN	TAF13	2	5	0.480145
chr1	109087971	109090858	109089414	ENSG00000273382.1	-	antisense	KNOWN	RP5-1065J22.8	1	1	0.588209
chr1	109089803	109096934	109093368	ENSG00000215717.5	+	protein_coding	KNOWN	TMEM167B	3	4	0.673482
chr1	109100193	109100619	109100406	ENSG00000270066.3	+	lincRNA	KNOWN	SCARNA2	1	1	0.676954
chr1	109100193	109100612	109100402	ENSG00000278249.1	+	scaRNA	KNOWN	SCARNA2	1	1	0.676954
chr1	109103535	109104766	109104150	ENSG00000251484.3	-	processed_pseudogene	KNOWN	RP5-1065J22.4	1	2	0.676954
chr1	109105951	109113857	109109904	ENSG00000179902.12	-	protein_coding	KNOWN	C1orf194	6	5	0.648097
chr1	109113679	109206781	109160230	ENSG00000116299.16	+	protein_coding	KNOWN	KIAA1324	14	22	0.672167
chr1	109213918	109238169	109226043	ENSG00000031698.12	+	protein_coding	KNOWN	SARS	6	12	0.748993
chr1	109250019	109275750	109262884	ENSG00000143126.7	+	protein_coding	KNOWN	CELSR2	4	34	1.185758
chr1	109279556	109283186	109281371	ENSG00000134222.16	-	protein_coding	KNOWN	PSRC1	12	8	1.556202
chr1	109292365	109307041	109299703	ENSG00000221986.6	-	protein_coding	KNOWN	MYBPHL	3	9	0.818344
chr1	109309568	109397951	109353759	ENSG00000134243.11	-	protein_coding	KNOWN	SORT1	10	20	0.480915
chr1	109399031	109426427	109412729	ENSG00000143106.12	-	protein_coding	KNOWN	PSMA5	6	9	0.378578
chr1	109466628	109482137	109474382	ENSG00000143028.8	+	protein_coding	KNOWN	SYPL2	2	6	0.647021
chr1	109483479	109492804	109488141	ENSG00000162650.15	+	protein_coding	KNOWN	ATXN7L2	7	12	0.890852
chr1	109494052	109502932	109498492	ENSG00000174151.14	+	protein_coding	KNOWN	CYB561D1	9	4	1.243563
chr1	109504175	109509738	109506956	ENSG00000181754.6	-	protein_coding	KNOWN	AMIGO1	2	2	1.243563
chr1	109539872	109548406	109544139	ENSG00000156097.12	+	protein_coding	KNOWN	GPR61	7	5	0.836491
chr1	109539906	109543837	109541871	ENSG00000254942.1	-	antisense	KNOWN	RP5-1160K1.8	1	2	0.836491
chr1	109548611	109618321	109583466	ENSG00000065135.8	+	protein_coding	KNOWN	GNAI3	1	9	0.394460
chr1	109591534	109591640	109591587	ENSG00000206832.1	-	snRNA	KNOWN	RNU6V	1	1	0.343176
chr1	109596225	109597781	109597003	ENSG00000225113.1	+	sense_overlapping	KNOWN	RP5-1160K1.3	1	2	0.343176
chr1	109598893	109598967	109598930	ENSG00000207709.2	+	miRNA	KNOWN	MIR197	1	1	0.343176
chr1	109603267	109619929	109611598	ENSG00000134183.11	-	protein_coding	KNOWN	GNAT2	2	8	0.520485
chr1	109616104	109632051	109624077	ENSG00000116337.15	+	protein_coding	KNOWN	AMPD2	26	19	0.735902
chr1	109628417	109630305	109629361	ENSG00000228703.1	-	antisense	KNOWN	RP5-1160K1.6	1	3	0.760616
chr1	109651370	109652099	109651734	ENSG00000235045.2	+	processed_pseudogene	KNOWN	RPL7P8	1	1	0.762346
chr1	109656081	109674836	109665458	ENSG00000168765.15	+	protein_coding	KNOWN	GSTM4	12	8	0.710439
chr1	109668022	109709551	109688786	ENSG00000213366.12	+	protein_coding	KNOWN	GSTM2	15	9	0.474386
chr1	109687814	109709039	109698426	ENSG00000134184.12	+	protein_coding	KNOWN	GSTM1	8	8	0.377639
chr1	109693117	109693742	109693429	ENSG00000260246.1	-	antisense	KNOWN	AC000032.2	1	2	0.356587
chr1	109712255	109775428	109743841	ENSG00000134201.10	+	protein_coding	KNOWN	GSTM5	6	9	0.576267
chr1	109725820	109775252	109750536	ENSG00000241720.2	+	antisense	KNOWN	RP4-735C1.4	1	4	0.589292
chr1	109733932	109741038	109737485	ENSG00000134202.10	-	protein_coding	KNOWN	GSTM3	6	15	0.503187
chr1	109750080	109764027	109757053	ENSG00000198758.10	-	protein_coding	KNOWN	EPS8L3	10	19	0.591918
chr1	109810642	109810998	109810820	ENSG00000224927.2	-	processed_pseudogene	KNOWN	NDUFA5P10	1	1	0.848538
chr1	109828355	109871436	109849895	ENSG00000228420.1	+	lincRNA	KNOWN	RP4-735C1.6	1	4	0.659686
chr1	109884176	109886264	109885220	ENSG00000235005.1	-	antisense	KNOWN	RP11-195M16.1	1	2	0.282989
chr1	109895973	109897861	109896917	ENSG00000261055.1	+	lincRNA	KNOWN	RP11-195M16.3	1	1	0.864186
chr1	109910242	109930992	109920617	ENSG00000184371.13	+	protein_coding	KNOWN	CSF1	9	9	0.925366
chr1	109984686	110023741	110004213	ENSG00000168710.17	+	protein_coding	KNOWN	AHCYL1	6	17	0.438181
chr1	110031577	110074641	110053109	ENSG00000143093.14	+	protein_coding	KNOWN	STRIP1	9	22	0.790885
chr1	110058340	110062555	110060447	ENSG00000258634.3	+	antisense	KNOWN	RP4-773N10.4	1	1	0.843313
chr1	110059994	110070700	110065347	ENSG00000156150.6	-	protein_coding	KNOWN	ALX3	1	4	0.854695
chr1	110082688	110109719	110096203	ENSG00000258673.1	+	antisense	KNOWN	LINC01397	1	4	0.834820
chr1	110112468	110113945	110113206	ENSG00000186150.4	+	protein_coding	KNOWN	UBL4B	1	1	0.856614
chr1	110150486	110202202	110176344	ENSG00000197106.6	+	protein_coding	KNOWN	SLC6A17	2	12	0.597702
chr1	110166186	110172489	110169337	ENSG00000227091.1	-	antisense	KNOWN	RP5-1028L10.1	3	2	0.587415
chr1	110177643	110178719	110178181	ENSG00000235526.1	-	antisense	KNOWN	RP5-1028L10.2	1	2	0.546370
chr1	110208834	110209987	110209410	ENSG00000224965.1	-	antisense	KNOWN	KCNC4-AS1	1	2	0.655421
chr1	110211343	110283100	110247221	ENSG00000116396.13	+	protein_coding	KNOWN	KCNC4	7	5	0.610193
chr1	110256754	110256930	110256842	ENSG00000282852.1	+	processed_pseudogene	KNOWN	RP5-1003J2.4	1	1	0.662004
chr1	110272484	110272607	110272545	ENSG00000200536.1	+	snoRNA	NOVEL	SNORA25	1	1	0.242551
chr1	110286375	110339171	110312773	ENSG00000227963.1	-	antisense	KNOWN	RP5-1074L1.1	1	4	0.276023
chr1	110338506	110346681	110342593	ENSG00000162775.14	+	protein_coding	KNOWN	RBM15	5	3	0.550577
chr1	110347116	110443817	110395466	ENSG00000224699.8	+	processed_transcript	KNOWN	LAMTOR5-AS1	51	7	0.324307
chr1	110362848	110391082	110376965	ENSG00000168679.17	-	protein_coding	KNOWN	SLC16A4	10	9	0.298314
chr1	110370154	110373003	110371578	ENSG00000273373.1	+	antisense	KNOWN	RP5-1074L1.4	1	1	0.266826
chr1	110401249	110407942	110404595	ENSG00000134248.13	-	protein_coding	KNOWN	LAMTOR5	8	5	0.195085
chr1	110451200	110457354	110454277	ENSG00000143125.5	+	protein_coding	KNOWN	PROK1	1	3	0.467031
chr1	110456505	110457354	110456929	ENSG00000270380.1	-	antisense	KNOWN	RP11-470L19.5	1	2	0.467031
chr1	110473943	110474980	110474461	ENSG00000282887.1	+	lincRNA	KNOWN	RP11-470L19.6	1	2	0.297934
chr1	110480752	110491277	110486014	ENSG00000240194.6	+	unitary_pseudogene	KNOWN	CYMP	3	9	0.321321
chr1	110487680	110490258	110488969	ENSG00000235407.1	-	lincRNA	KNOWN	RP11-470L19.2	1	2	0.317284
chr1	110517251	110518838	110518044	ENSG00000143105.6	-	protein_coding	KNOWN	KCNA10	1	1	0.225946
chr1	110593580	110631474	110612527	ENSG00000177301.13	-	protein_coding	KNOWN	KCNA2	5	5	0.126391
chr1	110601750	110601863	110601806	ENSG00000281882.1	+	miRNA	NOVEL	AL365361.1	1	1	0.062548
chr1	110653560	110657040	110655300	ENSG00000259834.1	-	lincRNA	KNOWN	RP11-284N8.3	1	1	-0.236241
chr1	110672465	110675033	110673749	ENSG00000177272.8	-	protein_coding	KNOWN	KCNA3	1	1	-0.210856
chr1	110764408	110764506	110764457	ENSG00000199710.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.315956
chr1	110848077	110848941	110848509	ENSG00000237415.2	-	processed_pseudogene	KNOWN	NRBF2P3	1	1	-0.951336
chr1	110853938	110854891	110854414	ENSG00000232791.3	+	unitary_pseudogene	KNOWN	OR11I1P	1	1	0.091992
chr1	110873154	110899928	110886541	ENSG00000143119.12	+	protein_coding	KNOWN	CD53	5	8	-0.371676
chr1	110936369	110942353	110939361	ENSG00000261654.1	-	sense_overlapping	KNOWN	RP11-96K19.4	1	1	-0.573024
chr1	110943467	110952848	110948157	ENSG00000232811.1	+	antisense	KNOWN	RP11-96K19.2	1	2	-0.431173
chr1	110947185	110964079	110955632	ENSG00000121931.15	-	protein_coding	KNOWN	LRIF1	3	4	-0.183748
chr1	110963302	110964649	110963975	ENSG00000273010.1	+	antisense	KNOWN	RP11-96K19.5	1	1	-0.105948
chr1	111007700	111015530	111011615	ENSG00000225672.1	-	processed_pseudogene	KNOWN	CCNT2P1	1	3	-0.228447
chr1	111041834	111041925	111041879	ENSG00000252760.1	+	rRNA	KNOWN	RNA5SP54	1	1	-0.284157
chr1	111117333	111140216	111128774	ENSG00000156171.14	-	protein_coding	KNOWN	DRAM2	11	9	-0.255185
chr1	111139627	111185102	111162364	ENSG00000134255.13	+	protein_coding	KNOWN	CEPT1	11	9	0.053038
chr1	111181374	111181491	111181432	ENSG00000272982.1	-	antisense	KNOWN	RP5-1180E21.4	1	1	0.025394
chr1	111184415	111185061	111184738	ENSG00000273221.1	-	antisense	KNOWN	RP5-1180E21.5	1	1	0.025394
chr1	111187174	111204535	111195854	ENSG00000162777.16	-	protein_coding	KNOWN	DENND2D	8	12	0.081155
chr1	111200771	111243440	111222105	ENSG00000064886.13	+	protein_coding	KNOWN	CHI3L2	17	13	0.101205
chr1	111250254	111256715	111253484	ENSG00000236040.1	+	unprocessed_pseudogene	KNOWN	CHIAP1	1	8	0.234792
chr1	111280059	111286116	111283087	ENSG00000203878.11	+	transcribed_unprocessed_pseudogene	KNOWN	CHIAP2	4	11	-0.356154
chr1	111290862	111320566	111305714	ENSG00000134216.18	+	protein_coding	KNOWN	CHIA	10	12	-0.320327
chr1	111317600	111323981	111320790	ENSG00000229283.1	-	antisense	KNOWN	RP5-1125M8.2	1	2	-0.261187
chr1	111323833	111324075	111323954	ENSG00000232240.2	+	processed_pseudogene	KNOWN	RP5-1125M8.3	1	1	-0.261187
chr1	111346288	111353013	111349650	ENSG00000173947.13	+	protein_coding	KNOWN	PIFO	4	6	-0.066124
chr1	111353275	111367409	111360342	ENSG00000234020.1	-	unprocessed_pseudogene	KNOWN	CHIAP3	1	9	-0.008120
chr1	111380291	111380571	111380431	ENSG00000236012.2	+	processed_pseudogene	KNOWN	HIGD1AP12	1	1	0.108202
chr1	111382860	111391819	111387339	ENSG00000227179.6	-	transcribed_unprocessed_pseudogene	KNOWN	PGCP1	2	9	0.076975
chr1	111414314	111427777	111421045	ENSG00000085465.12	-	protein_coding	KNOWN	OVGP1	3	11	0.167280
chr1	111431046	111433068	111432057	ENSG00000260948.1	-	sense_overlapping	KNOWN	RP11-552M11.8	1	1	0.350726
chr1	111437514	111438037	111437775	ENSG00000233337.1	+	processed_pseudogene	KNOWN	UBE2FP3	1	1	0.350726
chr1	111438638	111441364	111440001	ENSG00000243960.1	-	sense_overlapping	KNOWN	RP11-552M11.4	2	2	0.350726
chr1	111439890	111449376	111444633	ENSG00000116455.13	-	protein_coding	KNOWN	WDR77	4	10	0.350726
chr1	111446798	111446908	111446853	ENSG00000199890.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.350726
chr1	111448864	111462773	111455818	ENSG00000116459.10	+	protein_coding	KNOWN	ATP5F1	6	7	0.183976
chr1	111473792	111478512	111476152	ENSG00000143110.11	+	protein_coding	KNOWN	C1orf162	3	6	0.084043
chr1	111483348	111563962	111523655	ENSG00000121933.17	-	protein_coding	KNOWN	TMIGD3	7	6	0.198124
chr1	111490317	111490423	111490370	ENSG00000200360.1	-	snRNA	KNOWN	RNU6-792P	1	1	0.091992
chr1	111499429	111503760	111501594	ENSG00000282608.1	-	protein_coding	KNOWN	ADORA3	4	2	0.091992
chr1	111542218	111716691	111629454	ENSG00000116473.14	+	protein_coding	KNOWN	RAP1A	4	9	0.078408
chr1	111599655	111608723	111604189	ENSG00000231346.5	-	lincRNA	KNOWN	LINC01160	3	5	0.066152
chr1	111648291	111649544	111648917	ENSG00000215867.4	-	processed_pseudogene	KNOWN	KRT18P57	1	1	-0.110995
chr1	111650431	111650537	111650484	ENSG00000201028.1	-	snRNA	KNOWN	RNU6-151P	1	1	0.136386
chr1	111680630	111755824	111718227	ENSG00000197852.9	-	protein_coding	KNOWN	FAM212B	8	3	0.376618
chr1	111739841	111747798	111743819	ENSG00000227811.2	+	antisense	KNOWN	FAM212B-AS1	2	3	0.860322
chr1	111755245	111768016	111761630	ENSG00000064703.11	+	protein_coding	KNOWN	DDX20	5	11	0.647329
chr1	111770662	111989155	111879908	ENSG00000171385.9	-	protein_coding	KNOWN	KCND3	3	8	0.146664
chr1	111853762	111856905	111855333	ENSG00000232558.1	-	sense_intronic	KNOWN	KCND3-IT1	1	2	0.469910
chr1	111909336	111910931	111910133	ENSG00000237556.1	+	antisense	KNOWN	KCND3-AS1	3	4	-0.017826
chr1	111989770	111998842	111994306	ENSG00000231437.3	+	lincRNA	KNOWN	RP11-88H9.2	3	2	0.190170
chr1	112177234	112360528	112268881	ENSG00000231246.1	-	lincRNA	KNOWN	RP5-965F6.2	1	2	-0.134462
chr1	112363281	112363581	112363431	ENSG00000234388.2	+	processed_pseudogene	KNOWN	TXNP3	1	1	0.381498
chr1	112371004	112371107	112371055	ENSG00000238761.1	+	snoRNA	NOVEL	snoU13	1	1	0.116938
chr1	112396181	112463456	112429818	ENSG00000143079.14	+	protein_coding	KNOWN	CTTNBP2NL	4	6	0.334361
chr1	112466541	112530165	112498353	ENSG00000134245.17	+	protein_coding	KNOWN	WNT2B	4	6	0.355646
chr1	112517799	112518441	112518120	ENSG00000273483.1	-	antisense	KNOWN	RP4-671G15.2	1	1	0.580831
chr1	112523518	112620825	112572171	ENSG00000007341.18	-	protein_coding	KNOWN	ST7L	28	17	0.221867
chr1	112619173	112671619	112645396	ENSG00000116489.12	+	protein_coding	KNOWN	CAPZA1	6	10	0.227449
chr1	112625906	112626224	112626065	ENSG00000235299.2	-	processed_pseudogene	KNOWN	MRPL53P1	1	1	0.271100
chr1	112634719	112634784	112634751	ENSG00000252750.1	-	snRNA	KNOWN	RNU7-70P	1	1	0.091992
chr1	112673141	112700746	112686943	ENSG00000155363.18	+	protein_coding	KNOWN	MOV10	17	22	0.445175
chr1	112693688	112696621	112695154	ENSG00000225075.1	-	antisense	KNOWN	RP11-426L16.3	1	3	0.605763
chr1	112701106	112707434	112704270	ENSG00000155366.16	-	protein_coding	KNOWN	RHOC	19	7	0.605763
chr1	112702614	112711433	112707023	ENSG00000271810.5	-	protein_coding	KNOWN	RP11-426L16.10	5	8	0.636116
chr1	112709994	112715477	112712735	ENSG00000155367.15	-	protein_coding	KNOWN	PPM1J	5	11	0.792262
chr1	112715672	112717796	112716734	ENSG00000261595.1	+	antisense	KNOWN	RP11-426L16.9	1	1	0.792432
chr1	112720419	112727235	112723827	ENSG00000184599.13	+	protein_coding	KNOWN	FAM19A3	2	5	0.792432
chr1	112748095	112748475	112748285	ENSG00000234790.1	+	processed_pseudogene	KNOWN	NUTF2P4	1	1	0.296350
chr1	112820170	112850643	112835406	ENSG00000215866.7	-	lincRNA	KNOWN	LINC01356	3	7	0.495425
chr1	112850028	112877871	112863949	ENSG00000224167.1	+	lincRNA	KNOWN	RP3-522D1.1	2	3	0.477519
chr1	112890767	112890922	112890844	ENSG00000228040.1	-	processed_pseudogene	KNOWN	RP3-522D1.2	1	1	0.525790
chr1	112911847	112957013	112934430	ENSG00000155380.11	-	protein_coding	KNOWN	SLC16A1	7	5	0.203498
chr1	112923423	112924337	112923880	ENSG00000229020.4	+	processed_pseudogene	KNOWN	AKR7A2P1	1	1	0.077848
chr1	112956415	113047055	113001735	ENSG00000226419.7	+	antisense	KNOWN	SLC16A1-AS1	7	6	0.355674
chr1	113011687	113073105	113042396	ENSG00000238198.1	-	lincRNA	KNOWN	RP11-31F15.2	1	3	0.361981
chr1	113073209	113132260	113102734	ENSG00000198799.11	+	protein_coding	KNOWN	LRIG2	5	18	0.330335
chr1	113079537	113079847	113079692	ENSG00000281918.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.358272
chr1	113125321	113126883	113126102	ENSG00000237278.2	-	processed_pseudogene	KNOWN	RLIMP2	1	1	0.262833
chr1	113168994	113169403	113169198	ENSG00000233839.1	+	processed_pseudogene	KNOWN	RP11-389O22.4	1	1	0.115324
chr1	113198825	113199258	113199041	ENSG00000236887.1	+	processed_pseudogene	KNOWN	RP11-389O22.5	1	1	-0.126354
chr1	113390749	113685923	113538336	ENSG00000081026.18	+	protein_coding	KNOWN	MAGI3	6	22	-0.243191
chr1	113449700	113450728	113450214	ENSG00000232499.2	+	processed_pseudogene	KNOWN	RP11-512F24.1	1	1	-0.123136
chr1	113576757	113576899	113576828	ENSG00000238256.1	-	processed_pseudogene	KNOWN	MTND5P20	1	1	-0.086345
chr1	113696831	113759489	113728160	ENSG00000116793.15	-	protein_coding	KNOWN	PHTF1	12	19	-0.000715
chr1	113698884	113699631	113699257	ENSG00000232450.1	-	transcribed_processed_pseudogene	KNOWN	RP4-730K3.3	1	1	0.091992
chr1	113761832	113812476	113787154	ENSG00000081019.13	-	protein_coding	KNOWN	RSBN1	6	8	-0.055347
chr1	113812379	113829171	113820775	ENSG00000231128.5	+	antisense	KNOWN	RP5-1073O3.2	3	4	-0.001723
chr1	113813811	113871759	113842785	ENSG00000134242.15	-	protein_coding	KNOWN	PTPN22	11	21	-0.041336
chr1	113856635	113901237	113878936	ENSG00000226167.1	+	antisense	KNOWN	AP4B1-AS1	1	5	0.029810
chr1	113878168	113887547	113882857	ENSG00000188761.11	-	protein_coding	KNOWN	BCL2L15	6	4	0.013989
chr1	113894748	113905201	113899974	ENSG00000134262.12	-	protein_coding	KNOWN	AP4B1	14	11	-0.071507
chr1	113905141	113914086	113909613	ENSG00000118655.4	+	protein_coding	KNOWN	DCLRE1B	2	4	0.006750
chr1	113924000	113929492	113926746	ENSG00000235527.6	-	antisense	KNOWN	HIPK1-AS1	4	5	0.099769
chr1	113929192	113977869	113953530	ENSG00000163349.21	+	protein_coding	KNOWN	HIPK1	11	16	0.328394
chr1	113979391	114035572	114007481	ENSG00000116774.11	+	protein_coding	KNOWN	OLFML3	5	4	0.331742
chr1	114001433	114002235	114001834	ENSG00000270780.1	-	processed_pseudogene	KNOWN	RP4-590F24.1	1	2	0.442049
chr1	114032393	114034511	114033452	ENSG00000282048.1	+	sense_intronic	KNOWN	RP4-590F24.2	1	1	0.099187
chr1	114089291	114153919	114121605	ENSG00000134207.14	-	protein_coding	KNOWN	SYT6	9	8	0.203360
chr1	114206427	114262278	114234352	ENSG00000232895.2	-	lincRNA	KNOWN	RP4-543J13.1	1	2	0.121520
chr1	114279011	114279275	114279143	ENSG00000273698.1	-	processed_pseudogene	KNOWN	MRPL57P1	1	1	0.117229
chr1	114353986	114355178	114354582	ENSG00000271419.1	+	processed_pseudogene	KNOWN	RP4-591B8.3	1	2	0.120561
chr1	114392777	114511160	114451968	ENSG00000197323.10	-	protein_coding	KNOWN	TRIM33	7	21	-0.075030
chr1	114459934	114460360	114460147	ENSG00000226984.1	+	processed_pseudogene	KNOWN	RP4-591B8.2	1	1	0.179455
chr1	114468315	114469282	114468798	ENSG00000225650.2	+	processed_pseudogene	KNOWN	EIF2S2P5	1	1	0.179455
chr1	114490724	114490832	114490778	ENSG00000201114.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.216130
chr1	114535995	114537840	114536917	ENSG00000236480.1	+	processed_pseudogene	KNOWN	PKMP1	1	2	0.191527
chr1	114567557	114581639	114574598	ENSG00000116752.5	-	protein_coding	KNOWN	BCAS2	2	7	0.179173
chr1	114582848	114670422	114626635	ENSG00000175984.14	-	protein_coding	KNOWN	DENND2C	6	21	-0.081563
chr1	114673098	114695618	114684358	ENSG00000116748.19	-	protein_coding	KNOWN	AMPD1	3	16	-0.210988
chr1	114697627	114697924	114697775	ENSG00000242769.3	-	misc_RNA	KNOWN	RN7SL432P	1	1	-0.120312
chr1	114704469	114716894	114710681	ENSG00000213281.4	-	protein_coding	KNOWN	NRAS	1	7	-0.087796
chr1	114716913	114758676	114737794	ENSG00000009307.15	-	protein_coding	KNOWN	CSDE1	18	21	-0.181917
chr1	114727720	114727824	114727772	ENSG00000201900.1	+	misc_RNA	KNOWN	RNY1P13	1	1	-0.061718
chr1	114769479	114780685	114775082	ENSG00000052723.11	-	protein_coding	KNOWN	SIKE1	10	5	-0.076665
chr1	114837227	114851453	114844340	ENSG00000227970.1	+	unitary_pseudogene	KNOWN	NR1H5P	1	7	-0.341546
chr1	114854803	114995370	114925086	ENSG00000198765.11	+	protein_coding	KNOWN	SYCP1	10	32	-0.404802
chr1	115029824	115034309	115032066	ENSG00000134200.3	+	protein_coding	KNOWN	TSHB	2	3	-0.443236
chr1	115048011	115089500	115068755	ENSG00000134198.9	-	protein_coding	KNOWN	TSPAN2	4	8	0.130489
chr1	115099672	115102658	115101165	ENSG00000233730.1	+	lincRNA	KNOWN	RP4-666F24.3	1	2	0.436951
chr1	115283034	115368072	115325553	ENSG00000228035.1	+	antisense	KNOWN	RP4-663N10.1	1	2	0.436438
chr1	115285918	115338236	115312077	ENSG00000134259.3	-	protein_coding	KNOWN	NGF	1	3	0.461615
chr1	115471941	115476027	115473984	ENSG00000226973.1	+	unprocessed_pseudogene	KNOWN	RP4-663N10.2	1	5	0.518617
chr1	115479428	115481572	115480500	ENSG00000274468.1	+	unprocessed_pseudogene	KNOWN	RP4-663N10.3	1	2	0.518617
chr1	115556826	115557475	115557150	ENSG00000229101.1	+	unprocessed_pseudogene	KNOWN	TCEB1P20	1	2	0.314384
chr1	115564601	115565432	115565016	ENSG00000232185.1	+	processed_pseudogene	KNOWN	CNOT7P2	1	1	0.314384
chr1	115577229	115577786	115577507	ENSG00000270631.1	-	processed_pseudogene	KNOWN	RP11-710N8.3	1	1	-0.272672
chr1	115606471	115606768	115606619	ENSG00000239984.3	+	misc_RNA	KNOWN	RN7SL420P	1	1	0.240694
chr1	115621872	115622005	115621938	ENSG00000207502.1	-	snoRNA	NOVEL	SNORA42	1	1	0.195370
chr1	115641953	115698224	115670088	ENSG00000173218.14	+	protein_coding	KNOWN	VANGL1	6	8	0.130099
chr1	115700007	115768781	115734394	ENSG00000118729.11	-	protein_coding	KNOWN	CASQ2	2	11	0.054994
chr1	115836377	115843917	115840147	ENSG00000177551.5	-	protein_coding	KNOWN	NHLH2	3	3	0.011072
chr1	115856910	115857819	115857364	ENSG00000214204.4	-	processed_pseudogene	KNOWN	HNRNPA1P43	1	1	-0.383742
chr1	115916497	115916699	115916598	ENSG00000271143.1	+	processed_pseudogene	KNOWN	RP11-12L8.2	1	1	-0.126188
chr1	115919350	115931561	115925455	ENSG00000228127.2	+	lincRNA	KNOWN	RP11-12L8.1	2	4	-0.126380
chr1	115976498	116070054	116023276	ENSG00000163393.12	+	protein_coding	KNOWN	SLC22A15	3	12	0.152264
chr1	116013813	116017705	116015759	ENSG00000237993.1	-	antisense	KNOWN	RP11-159M11.2	1	3	0.245701
chr1	116111755	116135240	116123497	ENSG00000173212.4	+	protein_coding	KNOWN	MAB21L3	2	7	-0.010609
chr1	116164284	116166241	116165262	ENSG00000235933.1	+	lincRNA	KNOWN	RP5-1185H19.2	1	2	0.024878
chr1	116278606	116278821	116278713	ENSG00000221040.2	+	snoRNA	NOVEL	U3	1	1	-0.028933
chr1	116372668	116410261	116391464	ENSG00000163399.15	+	protein_coding	KNOWN	ATP1A1	11	23	0.073550
chr1	116392247	116418622	116405434	ENSG00000203865.9	-	processed_transcript	KNOWN	ATP1A1-AS1	4	3	0.026915
chr1	116413766	116413869	116413817	ENSG00000212385.1	-	snRNA	KNOWN	RNU6-817P	1	1	0.379274
chr1	116423724	116478842	116451283	ENSG00000233154.5	-	lincRNA	KNOWN	RP4-655J12.4	6	4	0.049144
chr1	116429049	116433368	116431208	ENSG00000230381.2	-	lincRNA	KNOWN	RP4-655J12.5	1	2	0.195862
chr1	116452536	116452627	116452581	ENSG00000200547.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.059126
chr1	116493016	116499212	116496114	ENSG00000224950.2	-	lincRNA	KNOWN	RP5-1086K13.1	1	2	0.296488
chr1	116514535	116571039	116542787	ENSG00000116815.15	-	protein_coding	KNOWN	CD58	5	6	0.211719
chr1	116532936	116534092	116533514	ENSG00000177173.5	-	processed_pseudogene	KNOWN	NAP1L4P1	1	1	0.067188
chr1	116560024	116560111	116560067	ENSG00000264419.1	-	miRNA	KNOWN	MIR548AC	1	1	0.194562
chr1	116574399	116667755	116621077	ENSG00000143061.17	-	protein_coding	KNOWN	IGSF3	4	12	-0.000993
chr1	116592106	116592199	116592152	ENSG00000238532.1	-	miRNA	NOVEL	AL355794.1	1	1	-0.096911
chr1	116671749	116671827	116671788	ENSG00000211543.2	+	miRNA	KNOWN	MIR320B1	1	1	0.167941
chr1	116694112	116706603	116700357	ENSG00000203864.3	+	lincRNA	KNOWN	C1orf137	1	4	0.068276
chr1	116713833	116714835	116714334	ENSG00000231072.1	-	processed_pseudogene	KNOWN	GAPDHP64	1	1	-0.142913
chr1	116739981	116742609	116741295	ENSG00000223489.1	-	processed_pseudogene	KNOWN	NEFHP1	1	1	0.075962
chr1	116754385	116769228	116761806	ENSG00000116824.4	+	protein_coding	KNOWN	CD2	2	5	-0.189522
chr1	116775104	116775623	116775363	ENSG00000225079.2	-	processed_pseudogene	KNOWN	FTH1P22	1	1	0.293626
chr1	116905150	116905294	116905222	ENSG00000221425.1	+	miRNA	NOVEL	AL157904.1	1	1	-0.126354
chr1	116909149	116909531	116909340	ENSG00000272715.1	-	lincRNA	KNOWN	RP4-753F5.1	1	1	-0.126354
chr1	116910057	116990358	116950207	ENSG00000134247.9	+	protein_coding	KNOWN	PTGFRN	3	9	-0.162578
chr1	116962347	116962471	116962409	ENSG00000252510.1	-	rRNA	KNOWN	RNA5SP55	1	1	0.043357
chr1	117001750	117036476	117019113	ENSG00000134256.12	+	protein_coding	KNOWN	CD101	4	10	-0.031657
chr1	117025482	117059490	117042486	ENSG00000236137.1	-	antisense	KNOWN	RP11-27K13.3	2	4	-0.187829
chr1	117060303	117107453	117083878	ENSG00000116830.11	+	protein_coding	KNOWN	TTF2	7	23	0.254348
chr1	117094643	117094728	117094685	ENSG00000215930.1	+	miRNA	KNOWN	MIR942	1	1	0.454562
chr1	117111060	117122587	117116823	ENSG00000134253.9	-	protein_coding	KNOWN	TRIM45	5	7	0.146148
chr1	117138229	117138609	117138419	ENSG00000228453.1	+	processed_pseudogene	KNOWN	RPS15AP9	1	1	-0.141599
chr1	117143587	117210960	117177273	ENSG00000134258.16	-	protein_coding	KNOWN	VTCN1	7	6	0.042471
chr1	117243212	117243508	117243360	ENSG00000277141.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.145573
chr1	117295520	117321336	117308428	ENSG00000235202.1	+	lincRNA	KNOWN	LINC01525	1	3	-0.062146
chr1	117364899	117365473	117365186	ENSG00000271427.1	-	lincRNA	KNOWN	RP11-188D8.1	1	1	0.166417
chr1	117367449	117528872	117448160	ENSG00000198162.12	+	protein_coding	KNOWN	MAN1A2	5	13	-0.204566
chr1	117493515	117495006	117494260	ENSG00000279513.1	+	TEC	KNOWN	RP4-675C20.4	1	1	-0.432670
chr1	117549415	117549922	117549668	ENSG00000226755.2	+	processed_pseudogene	KNOWN	VPS25P1	1	1	-0.199612
chr1	117596832	117605770	117601301	ENSG00000236866.5	-	antisense	KNOWN	AL157902.3	3	3	0.279077
chr1	117605934	117628372	117617153	ENSG00000183508.4	+	protein_coding	KNOWN	FAM46C	1	2	0.132616
chr1	117640812	117641639	117641225	ENSG00000213262.3	-	processed_pseudogene	KNOWN	VDAC2P3	1	1	0.179015
chr1	117688621	117688742	117688681	ENSG00000212266.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.011102
chr1	117700029	117700242	117700135	ENSG00000270719.1	-	processed_pseudogene	KNOWN	RP11-134N8.2	1	1	0.048270
chr1	117778087	117778506	117778296	ENSG00000228217.1	-	processed_pseudogene	KNOWN	PNRC2P1	1	1	-0.320504
chr1	117863485	117929630	117896557	ENSG00000196505.10	-	protein_coding	KNOWN	GDAP2	6	14	-0.104383
chr1	117929720	117966542	117948131	ENSG00000065183.15	+	protein_coding	KNOWN	WDR3	4	27	-0.148932
chr1	117953861	118185223	118069542	ENSG00000155761.13	-	protein_coding	KNOWN	SPAG17	13	49	-0.363755
chr1	118264372	118264489	118264430	ENSG00000222209.1	-	rRNA	KNOWN	RNA5SP56	1	1	-0.237714
chr1	118614333	118615646	118614989	ENSG00000226126.2	-	processed_pseudogene	KNOWN	PSMC1P12	1	1	-0.275465
chr1	118712999	118713678	118713338	ENSG00000229911.2	+	processed_pseudogene	KNOWN	RP4-630J13.1	1	1	-0.586080
chr1	118883046	118989556	118936301	ENSG00000092607.13	-	protein_coding	KNOWN	TBX15	3	8	0.031521
chr1	119000344	119001392	119000868	ENSG00000226172.2	-	lincRNA	KNOWN	RP4-712E4.1	1	2	0.483570
chr1	119000618	119001405	119001011	ENSG00000239216.1	-	lincRNA	KNOWN	RP4-712E4.2	1	2	0.483570
chr1	119031216	119140671	119085943	ENSG00000116874.11	-	protein_coding	KNOWN	WARS2	5	6	-0.146869
chr1	119047405	119064785	119056095	ENSG00000224238.2	+	antisense	KNOWN	WARS2-IT1	1	2	-0.231495
chr1	119084998	119085954	119085476	ENSG00000223575.2	-	processed_pseudogene	KNOWN	RBMX2P3	1	1	-0.186984
chr1	119126539	119127291	119126915	ENSG00000236804.1	-	processed_pseudogene	KNOWN	RPS3AP12	1	1	-0.169274
chr1	119140396	119275973	119208184	ENSG00000231365.5	+	antisense	KNOWN	RP11-418J17.1	6	7	-0.050067
chr1	119219314	119220096	119219705	ENSG00000227056.2	-	processed_pseudogene	KNOWN	RPL6P2	1	1	-0.443340
chr1	119260265	119327303	119293784	ENSG00000227712.1	-	lincRNA	KNOWN	RP11-418J17.3	1	3	-0.078931
chr1	119328176	119356182	119342179	ENSG00000232650.5	+	lincRNA	KNOWN	RP5-834N19.1	2	4	0.211047
chr1	119331397	119331525	119331461	ENSG00000194297.2	-	snRNA	KNOWN	RNU1-75P	1	1	0.295084
chr1	119368779	119394130	119381454	ENSG00000116882.14	+	protein_coding	KNOWN	HAO2	5	9	-0.206547
chr1	119368946	119370331	119369638	ENSG00000230921.1	+	sense_intronic	KNOWN	HAO2-IT1	1	2	-0.011128
chr1	119414931	119423035	119418983	ENSG00000203859.9	+	protein_coding	KNOWN	HSD3B2	6	4	0.037199
chr1	119434166	119435080	119434623	ENSG00000232780.2	-	transcribed_processed_pseudogene	KNOWN	GAPDHP74	2	1	-0.276934
chr1	119439001	119446086	119442543	ENSG00000203858.3	+	unprocessed_pseudogene	KNOWN	HSD3BP2	1	3	-0.276934
chr1	119462029	119463021	119462525	ENSG00000235595.1	-	processed_pseudogene	KNOWN	GAPDHP23	1	1	-0.096770
chr1	119467221	119473803	119470512	ENSG00000187481.2	+	unprocessed_pseudogene	KNOWN	HSD3BP1	1	3	-0.100991
chr1	119495836	119496841	119496338	ENSG00000229570.2	-	processed_pseudogene	KNOWN	GAPDHP58	1	1	-0.027918
chr1	119507198	119515054	119511126	ENSG00000203857.9	+	protein_coding	KNOWN	HSD3B1	5	4	-0.191494
chr1	119533749	119534746	119534247	ENSG00000226443.3	-	processed_pseudogene	KNOWN	GAPDHP32	1	1	-0.217791
chr1	119538509	119545913	119542211	ENSG00000249798.1	+	unprocessed_pseudogene	KNOWN	HSD3BP3	1	3	-0.217791
chr1	119558755	119559774	119559264	ENSG00000239873.2	-	processed_pseudogene	KNOWN	GAPDHP27	1	1	-0.003005
chr1	119564066	119572067	119568066	ENSG00000203855.7	+	unprocessed_pseudogene	KNOWN	HSD3BP4	1	3	0.021549
chr1	119596167	119597179	119596673	ENSG00000240244.3	-	processed_pseudogene	KNOWN	GAPDHP33	1	1	-0.115009
chr1	119597702	119599271	119598486	ENSG00000260941.1	-	sense_overlapping	KNOWN	LINC00622	1	1	-0.115009
chr1	119601340	119609250	119605295	ENSG00000198857.3	+	transcribed_unprocessed_pseudogene	KNOWN	HSD3BP5	1	3	-0.115009
chr1	119619422	119647773	119633597	ENSG00000143067.4	-	protein_coding	KNOWN	ZNF697	1	3	0.505708
chr1	119659798	119744215	119702006	ENSG00000092621.11	+	protein_coding	KNOWN	PHGDH	7	12	0.142246
chr1	119747996	119768905	119758450	ENSG00000134240.11	-	protein_coding	KNOWN	HMGCS2	4	10	0.514522
chr1	119794018	119811660	119802839	ENSG00000134193.14	-	protein_coding	KNOWN	REG4	4	7	0.497546
chr1	119834870	119844514	119839692	ENSG00000215864.5	-	unprocessed_pseudogene	KNOWN	NBPF7	1	9	0.024878
chr1	119853316	119853748	119853532	ENSG00000227205.4	+	processed_pseudogene	KNOWN	PFN1P9	1	1	0.476135
chr1	119886304	119886927	119886615	ENSG00000226446.1	+	processed_pseudogene	KNOWN	NOTCH2P1	1	1	0.225258
chr1	119893533	119896495	119895014	ENSG00000134249.6	-	protein_coding	KNOWN	ADAM30	1	1	0.275022
chr1	119909255	119910613	119909934	ENSG00000261662.1	-	sense_overlapping	KNOWN	RP5-1042I8.7	1	1	0.246095
chr1	119911553	120069626	119990589	ENSG00000134250.17	-	protein_coding	KNOWN	NOTCH2	8	34	0.228701
chr1	120076616	120077091	120076853	ENSG00000273406.1	+	lincRNA	KNOWN	RP11-114O18.1	1	1	0.254422
chr1	120126974	120127074	120127024	ENSG00000207149.1	+	snRNA	KNOWN	RNU6-465P	1	1	0.347249
chr1	120150898	120176515	120163706	ENSG00000265808.3	-	protein_coding	KNOWN	SEC22B	2	5	0.155874
chr1	120197085	120319680	120258382	ENSG00000274642.1	+	unprocessed_pseudogene	KNOWN	CH17-472G23.1	1	6	0.265605
chr1	120228046	120228295	120228170	ENSG00000277313.1	-	misc_RNA	NOVEL	7SK	1	1	0.207469
chr1	120267334	120341871	120304602	ENSG00000223804.5	-	transcribed_unprocessed_pseudogene	KNOWN	CH17-472G23.2	4	4	0.271406
chr1	120354987	120355148	120355067	ENSG00000273727.1	+	snRNA	NOVEL	U1	1	1	0.361510
chr1	120432204	120434052	120433128	ENSG00000270392.2	-	transcribed_processed_pseudogene	KNOWN	PFN1P2	2	1	0.380880
chr1	120436353	120467739	120452046	ENSG00000270231.3	+	unprocessed_pseudogene	KNOWN	NBPF8	1	25	0.435080
chr1	120489625	120579190	120534407	ENSG00000275131.1	-	unprocessed_pseudogene	KNOWN	CH17-472G23.4	1	38	0.274591
chr1	120515119	120515184	120515151	ENSG00000275509.1	+	miRNA	NOVEL	AC241952.1	1	1	0.325191
chr1	120571120	120571264	120571192	ENSG00000273694.1	+	snRNA	NOVEL	U2	1	1	0.164306
chr1	120670127	120670376	120670251	ENSG00000275933.1	+	misc_RNA	NOVEL	7SK	1	1	0.341111
chr1	120723923	120793877	120758900	ENSG00000278882.1	+	protein_coding	KNOWN	AC253572.1	1	6	0.247451
chr1	120805418	120841481	120823449	ENSG00000273136.5	+	protein_coding	KNOWN	NBPF26	8	26	0.499891
chr1	120850819	120850985	120850902	ENSG00000275538.1	-	snRNA	KNOWN	RNVU1-19	1	1	0.246835
chr1	120889746	120890405	120890075	ENSG00000263353.3	+	protein_coding	KNOWN	PPIAL4A	1	1	-0.295882
chr1	120913151	120914238	120913694	ENSG00000281741.1	-	protein_coding	KNOWN	AC241377.2	1	1	-0.149016
chr1	120913275	121009291	120961283	ENSG00000226067.6	+	lincRNA	KNOWN	LINC00623	5	4	-0.117966
chr1	120942600	120942763	120942681	ENSG00000277610.1	+	snRNA	KNOWN	RNVU1-4	1	1	-0.001118
chr1	120985692	121052167	121018929	ENSG00000275585.1	-	antisense	KNOWN	CH17-118O6.3	1	3	-0.067186
chr1	121008362	121008507	121008434	ENSG00000273516.1	-	snRNA	NOVEL	U1	1	1	-0.259994
chr1	121045497	121045588	121045542	ENSG00000212094.3	+	miRNA	NOVEL	AC241377.1	1	1	-0.252656
chr1	121058948	121059353	121059150	ENSG00000275296.1	-	processed_pseudogene	KNOWN	CH17-118O6.4	1	1	0.012703
chr1	121087345	121096310	121091827	ENSG00000198019.12	+	protein_coding	KNOWN	FCGR1B	10	6	-0.137457
chr1	121087528	121116676	121102102	ENSG00000234998.1	-	antisense	KNOWN	RP11-439A17.10	1	2	-0.147366
chr1	121090289	121097655	121093972	ENSG00000233029.3	-	antisense	KNOWN	RP11-439A17.9	1	2	-0.174795
chr1	121108210	121117257	121112733	ENSG00000223345.3	-	transcribed_unprocessed_pseudogene	KNOWN	HIST2H2BA	2	2	-0.116181
chr1	121118126	121146826	121132476	ENSG00000227193.2	+	lincRNA	KNOWN	RP11-439A17.4	1	4	0.185850
chr1	121118195	121118610	121118402	ENSG00000213244.3	-	unprocessed_pseudogene	KNOWN	HIST2H3DP1	1	1	-0.101733
chr1	121142051	121142438	121142244	ENSG00000268993.1	-	processed_pseudogene	KNOWN	RP11-439A17.5	1	1	0.388766
chr1	121167646	121185539	121176592	ENSG00000188610.12	-	protein_coding	KNOWN	FAM72B	7	5	0.038411
chr1	121184810	121392822	121288816	ENSG00000171943.11	+	protein_coding	KNOWN	SRGAP2C	5	10	0.241979
chr1	121314947	121315055	121315001	ENSG00000275129.1	-	processed_pseudogene	KNOWN	CH17-219N22.1	1	1	0.345748
chr1	121360156	121398806	121379481	ENSG00000230806.1	-	antisense	KNOWN	SRGAP2-AS1	2	4	0.317873
chr1	121396754	121463129	121429941	ENSG00000227082.1	+	lincRNA	KNOWN	CH17-437K3.1	1	2	-0.221406
chr1	121412448	121412548	121412498	ENSG00000274366.1	+	miRNA	NOVEL	AC244021.1	1	1	-0.157787
chr1	121412719	121429274	121420996	ENSG00000231429.2	+	lincRNA	KNOWN	RP11-343N15.2	1	4	-0.157787
chr1	121494379	121510383	121502381	ENSG00000228826.2	-	lincRNA	KNOWN	RP11-344P13.4	1	3	-0.245803
chr1	121502344	121503891	121503117	ENSG00000233432.2	+	processed_pseudogene	KNOWN	RP11-344P13.3	1	1	-0.251082
chr1	121518366	121518829	121518597	ENSG00000272583.1	-	lincRNA	KNOWN	RP11-344P13.6	1	1	-0.031067
chr1	121519112	121571892	121545502	ENSG00000231752.5	+	transcribed_unprocessed_pseudogene	KNOWN	EMBP1	3	8	-0.161687
chr1	121573946	121580524	121577235	ENSG00000224857.1	-	lincRNA	KNOWN	RP11-344P13.1	1	2	-0.316473
chr1	143343180	143343275	143343227	ENSG00000276118.1	+	unprocessed_pseudogene	KNOWN	CH17-333M13.2	1	1	0.489676
chr1	143354191	143386122	143370156	ENSG00000277095.1	+	unprocessed_pseudogene	KNOWN	CH17-333M13.1	1	5	-0.095811
chr1	143419625	143420207	143419916	ENSG00000277702.1	-	unprocessed_pseudogene	KNOWN	CH17-13I23.3	1	2	0.079817
chr1	143439605	143439714	143439659	ENSG00000252830.2	+	rRNA	NOVEL	5S_rRNA	1	1	0.073920
chr1	143449571	143450245	143449908	ENSG00000264145.2	-	processed_pseudogene	KNOWN	CH17-13I23.2	1	1	0.024782
chr1	143461221	143498767	143479994	ENSG00000274927.1	-	unprocessed_pseudogene	KNOWN	CH17-13I23.1	1	10	-0.361827
chr1	143487772	143488353	143488062	ENSG00000242943.1	+	processed_pseudogene	KNOWN	NKAIN1P1	1	1	-0.623367
chr1	143498785	143499102	143498943	ENSG00000223495.2	+	processed_pseudogene	KNOWN	RP11-763B22.7	1	1	-0.066706
chr1	143499187	143500512	143499849	ENSG00000235887.2	-	lincRNA	KNOWN	RP11-763B22.6	1	3	-0.066706
chr1	143541645	143541710	143541677	ENSG00000264022.1	-	miRNA	NOVEL	AC239859.1	1	1	-0.215290
chr1	143541768	143572834	143557301	ENSG00000203825.4	+	unprocessed_pseudogene	KNOWN	RP11-744H18.1	1	17	-0.035410
chr1	143595216	143635641	143615428	ENSG00000179571.10	-	unprocessed_pseudogene	KNOWN	NBPF17P	1	16	-0.138867
chr1	143619994	143620527	143620260	ENSG00000226028.2	+	processed_pseudogene	KNOWN	PFN1P12	1	1	-0.229936
chr1	143652050	143652215	143652132	ENSG00000202167.1	-	snRNA	KNOWN	RNU1-114P	1	1	0.017610
chr1	143699456	143699619	143699537	ENSG00000207349.1	-	snRNA	KNOWN	RNVU1-17	1	1	-0.172603
chr1	143720510	143720644	143720577	ENSG00000252826.1	-	snRNA	KNOWN	RNU1-92P	1	1	-0.028638
chr1	143729192	143729268	143729230	ENSG00000277331.1	+	miRNA	NOVEL	AC239800.1	1	1	-0.028638
chr1	143729407	143729570	143729488	ENSG00000206737.1	-	snRNA	KNOWN	RNVU1-18	1	1	-0.028638
chr1	143736066	143739506	143737786	ENSG00000232721.2	+	lincRNA	KNOWN	RP11-403I13.5	1	2	0.029256
chr1	143745249	143757452	143751350	ENSG00000223779.5	+	unprocessed_pseudogene	KNOWN	RP11-403I13.4	1	6	0.062717
chr1	143766540	143769083	143767811	ENSG00000242352.2	+	transcribed_processed_pseudogene	KNOWN	FAM91A3P	1	1	0.084043
chr1	143784376	143784671	143784523	ENSG00000270962.1	+	processed_pseudogene	KNOWN	RP11-403I13.10	1	1	-0.108602
chr1	143790010	143797108	143793559	ENSG00000263590.2	+	lincRNA	KNOWN	RP11-403I13.7	1	2	0.098170
chr1	143791542	143791687	143791614	ENSG00000252105.1	-	snRNA	KNOWN	RNU1-143P	1	1	0.098170
chr1	143811359	143825837	143818598	ENSG00000233430.3	-	unprocessed_pseudogene	KNOWN	RP11-403I13.9	1	6	0.086186
chr1	143828767	143828863	143828815	ENSG00000239006.2	-	miRNA	NOVEL	AC239798.1	1	1	0.086186
chr1	143846097	143846504	143846300	ENSG00000237503.2	-	processed_pseudogene	KNOWN	RP5-998N21.3	1	1	-0.190044
chr1	143874793	143883575	143879184	ENSG00000265531.3	+	unprocessed_pseudogene	KNOWN	FCGR1C	1	6	0.030962
chr1	143875171	143904650	143889910	ENSG00000240929.2	-	transcribed_unprocessed_pseudogene	KNOWN	HIST2H2BB	2	2	0.046198
chr1	143877731	143885076	143881403	ENSG00000234571.1	-	lincRNA	KNOWN	RP5-998N21.4	1	2	0.030962
chr1	143904301	143905964	143905132	ENSG00000273213.1	-	processed_transcript	KNOWN	RP5-998N21.10	1	2	0.061618
chr1	143905487	143934776	143920131	ENSG00000230186.3	+	antisense	KNOWN	RP5-998N21.7	1	4	0.185329
chr1	143905556	143905966	143905761	ENSG00000203818.7	-	protein_coding	KNOWN	HIST2H3PS2	1	1	0.061618
chr1	143929994	143930382	143930188	ENSG00000268074.1	-	processed_pseudogene	KNOWN	RPL22P5	1	1	0.184974
chr1	143955364	143971965	143963664	ENSG00000263513.5	-	protein_coding	KNOWN	FAM72C	2	4	0.117585
chr1	143975087	144068350	144021718	ENSG00000270872.2	+	unprocessed_pseudogene	KNOWN	SRGAP2D	1	7	0.333107
chr1	144085628	144086098	144085863	ENSG00000276674.1	+	IG_V_pseudogene	KNOWN	IGKV1OR1-1	1	2	0.261252
chr1	144168752	144168850	144168801	ENSG00000275075.1	+	processed_pseudogene	KNOWN	CH17-248H7.2	1	1	0.384503
chr1	144179777	144211729	144195753	ENSG00000275767.1	+	unprocessed_pseudogene	KNOWN	CH17-248H7.3	1	7	0.054228
chr1	144227030	144250288	144238659	ENSG00000232527.7	-	lincRNA	KNOWN	RP11-14N7.2	4	3	0.225712
chr1	144265217	144265326	144265271	ENSG00000276442.1	+	rRNA	NOVEL	5S_rRNA	1	1	0.204956
chr1	144274892	144277993	144276442	ENSG00000175658.4	-	processed_pseudogene	KNOWN	DRD5P2	1	2	-0.051536
chr1	144276484	144305180	144290832	ENSG00000276756.4	-	transcribed_unprocessed_pseudogene	KNOWN	CH17-125A10.1	2	10	-0.280252
chr1	144372875	144373659	144373267	ENSG00000271567.1	-	protein_coding	KNOWN	PPIAL4E	1	1	-0.534791
chr1	144401069	144401355	144401212	ENSG00000271439.1	-	processed_pseudogene	KNOWN	RP11-666A1.7	1	1	-0.421417
chr1	144412576	144412740	144412658	ENSG00000207205.1	+	snRNA	KNOWN	RNVU1-15	1	1	0.060283
chr1	144418113	144419192	144418652	ENSG00000237343.1	-	lincRNA	KNOWN	RP11-763B22.4	1	2	0.060283
chr1	144418678	144419190	144418934	ENSG00000233586.1	+	processed_pseudogene	KNOWN	RP11-763B22.3	1	1	0.060283
chr1	144421386	144461674	144441530	ENSG00000266338.6	-	protein_coding	KNOWN	NBPF15	8	21	0.239699
chr1	144442606	144443004	144442805	ENSG00000227212.3	+	processed_pseudogene	KNOWN	PFN1P6	1	1	0.211687
chr1	144472535	144474790	144473662	ENSG00000229002.1	-	unprocessed_pseudogene	KNOWN	RP11-666A1.4	1	2	-0.031640
chr1	144523860	144524021	144523940	ENSG00000275291.1	-	snRNA	NOVEL	U1	1	1	-0.048669
chr1	144551779	144551943	144551861	ENSG00000278099.1	-	snRNA	NOVEL	U1	1	1	0.471229
chr1	144560451	144560527	144560489	ENSG00000273689.1	+	miRNA	NOVEL	AC253578.1	1	1	0.471229
chr1	144560666	144560829	144560747	ENSG00000277918.1	-	snRNA	NOVEL	U1	1	1	0.471229
chr1	144592868	144593527	144593197	ENSG00000279782.1	+	protein_coding	KNOWN	PPIAL4F	1	1	-0.569357
chr1	144627192	144642372	144634782	ENSG00000277199.1	-	lincRNA	KNOWN	CH17-125A10.2	2	6	-0.520202
chr1	144641371	144919902	144780636	ENSG00000224363.2	+	lincRNA	KNOWN	RP11-289H16.1	1	4	-0.004463
chr1	144661200	144679513	144670356	ENSG00000278273.1	+	unprocessed_pseudogene	KNOWN	RP11-763B22.11	1	9	-0.299618
chr1	144701050	144701159	144701104	ENSG00000222854.1	-	rRNA	KNOWN	RNA5SP59	1	1	-0.115901
chr1	144754572	144786606	144770589	ENSG00000273825.1	-	unprocessed_pseudogene	KNOWN	CH17-164J11.1	1	5	0.154499
chr1	144887265	145095528	144991396	ENSG00000196369.10	-	protein_coding	KNOWN	SRGAP2B	6	10	0.257910
chr1	144965025	144965135	144965080	ENSG00000271644.1	+	processed_pseudogene	KNOWN	RP3-365I19.2	1	1	0.144080
chr1	145096000	145112696	145104348	ENSG00000215784.5	+	protein_coding	KNOWN	FAM72D	1	4	0.338242
chr1	145132157	145132253	145132205	ENSG00000263497.2	+	miRNA	NOVEL	AC241585.1	1	1	-0.205976
chr1	145164099	145216058	145190078	ENSG00000272419.5	-	processed_transcript	KNOWN	RP11-403I13.8	8	4	0.147839
chr1	145169519	145169664	145169591	ENSG00000277678.1	+	snRNA	NOVEL	U1	1	1	-0.066554
chr1	145214851	145215938	145215394	ENSG00000281571.1	+	protein_coding	KNOWN	AC241585.2	1	1	-0.053686
chr1	145233001	145233519	145233260	ENSG00000223612.3	+	processed_pseudogene	KNOWN	RP11-289I10.2	1	1	-0.007544
chr1	145241630	145242124	145241877	ENSG00000256374.2	-	protein_coding	KNOWN	PPIAL4D	1	1	-0.007544
chr1	145269604	145269890	145269747	ENSG00000271291.1	-	processed_pseudogene	KNOWN	RP11-289I10.3	1	1	-0.385587
chr1	145281116	145281279	145281197	ENSG00000207501.1	+	snRNA	KNOWN	RNVU1-14	1	1	-0.237132
chr1	145281116	145281462	145281289	ENSG00000276216.1	+	lincRNA	KNOWN	CH17-373J23.1	1	1	-0.237132
chr1	145286610	145287755	145287182	ENSG00000236140.1	-	lincRNA	KNOWN	RP11-89F3.2	1	2	-0.237132
chr1	145289900	145405778	145347839	ENSG00000162825.16	-	protein_coding	KNOWN	NBPF20	5	138	0.465308
chr1	145407772	145408173	145407972	ENSG00000234367.1	+	processed_pseudogene	KNOWN	PFN1P3	1	1	0.377261
chr1	145431527	145431693	145431610	ENSG00000270384.1	-	snRNA	NOVEL	U1	1	1	0.434593
chr1	145465617	145465780	145465698	ENSG00000270722.1	-	snRNA	NOVEL	U1	1	1	0.674434
chr1	145507444	145508607	145508025	ENSG00000278182.1	+	unprocessed_pseudogene	KNOWN	CH17-262O2.2	1	2	0.387768
chr1	145509047	145520594	145514820	ENSG00000275064.1	+	unprocessed_pseudogene	KNOWN	CH17-262O2.1	1	9	0.368081
chr1	145572345	145607858	145590101	ENSG00000272150.5	-	transcribed_unprocessed_pseudogene	KNOWN	NBPF25P	2	20	0.288409
chr1	145607990	145670648	145639319	ENSG00000117262.18	+	protein_coding	KNOWN	GPR89A	13	15	0.208093
chr1	145670852	145708148	145689500	ENSG00000174827.13	-	protein_coding	KNOWN	PDZK1	7	9	0.327196
chr1	145719471	145739288	145729379	ENSG00000117281.15	+	protein_coding	KNOWN	CD160	5	6	0.552376
chr1	145738868	145824077	145781472	ENSG00000265491.4	-	protein_coding	KNOWN	RNF115	2	9	0.455618
chr1	145824088	145842505	145833296	ENSG00000186141.8	+	protein_coding	KNOWN	POLR3C	6	15	0.498163
chr1	145845629	145848953	145847291	ENSG00000186364.11	+	protein_coding	KNOWN	NUDT17	5	8	0.501200
chr1	145848522	145859836	145854179	ENSG00000131788.15	-	protein_coding	KNOWN	PIAS3	9	15	0.981415
chr1	145850587	145850645	145850616	ENSG00000278549.1	-	miRNA	KNOWN	MIR6736	1	1	1.053518
chr1	145866560	145885866	145876213	ENSG00000198483.12	-	protein_coding	KNOWN	ANKRD35	2	14	0.674007
chr1	145891208	145910189	145900698	ENSG00000143127.12	-	protein_coding	KNOWN	ITGA10	4	30	0.852979
chr1	145892847	145893483	145893165	ENSG00000244619.2	+	antisense	KNOWN	RP11-315I20.3	1	2	0.855231
chr1	145911350	145918837	145915093	ENSG00000131779.10	-	protein_coding	KNOWN	PEX11B	3	4	0.630293
chr1	145917714	145927678	145922696	ENSG00000265241.6	-	protein_coding	KNOWN	RBM8A	9	7	0.630293
chr1	145919013	145925341	145922177	ENSG00000211451.11	+	unitary_pseudogene	KNOWN	GNRHR2	5	4	0.630293
chr1	145926590	145959179	145942884	ENSG00000234222.6	+	antisense	KNOWN	RP11-315I20.1	19	5	0.687863
chr1	145927258	145977811	145952534	ENSG00000280778.1	+	protein_coding	KNOWN	CH17-270A2.2	2	6	0.752992
chr1	145933423	145958001	145945712	ENSG00000271601.3	-	protein_coding	KNOWN	LIX1L	1	6	0.691460
chr1	145959442	145964582	145962012	ENSG00000272031.2	-	protein_coding	KNOWN	ANKRD34A	3	4	0.499167
chr1	145961388	145964422	145962905	ENSG00000278431.1	+	antisense	KNOWN	CH17-270A2.1	1	2	0.499167
chr1	145964702	145978848	145971775	ENSG00000121851.12	+	protein_coding	KNOWN	POLR3GL	4	8	1.041258
chr1	145992435	145996600	145994517	ENSG00000265972.5	-	protein_coding	KNOWN	TXNIP	4	8	0.867710
chr1	146017468	146021918	146019693	ENSG00000168509.18	-	protein_coding	KNOWN	HFE2	6	4	0.570039
chr1	146052081	146052244	146052162	ENSG00000201558.1	-	snRNA	KNOWN	RNVU1-6	1	1	0.756902
chr1	146052566	146061948	146057257	ENSG00000233396.7	+	lincRNA	KNOWN	RP11-458D21.1	6	4	0.756902
chr1	146064699	146144942	146104820	ENSG00000271425.6	-	protein_coding	KNOWN	NBPF10	7	91	0.515832
chr1	146113652	146229000	146171326	ENSG00000213240.8	-	protein_coding	KNOWN	RP11-458D21.5	1	21	0.372433
chr1	146146203	146229026	146187614	ENSG00000264343.5	-	protein_coding	KNOWN	NOTCH2NL	4	6	0.321799
chr1	146235806	146237807	146236806	ENSG00000276509.1	+	lincRNA	KNOWN	CH17-353B19.1	1	1	0.549383
chr1	146288596	146288696	146288646	ENSG00000201789.1	+	snRNA	KNOWN	RNU6-1071P	1	1	0.554817
chr1	146298170	146298715	146298442	ENSG00000271121.2	+	processed_pseudogene	KNOWN	NUDT4P2	1	1	0.261050
chr1	146321842	146328211	146325026	ENSG00000277406.1	-	unprocessed_pseudogene	KNOWN	CH17-385C13.2	1	3	0.460379
chr1	146344006	146344790	146344398	ENSG00000270339.2	-	protein_coding	KNOWN	AC243756.1	1	1	-0.111100
chr1	146376807	146376970	146376888	ENSG00000273768.1	+	snRNA	NOVEL	U1	1	1	0.438795
chr1	146377104	146377184	146377144	ENSG00000277573.1	-	miRNA	NOVEL	AC245407.1	1	1	0.438795
chr1	146409903	146410062	146409982	ENSG00000274428.1	+	snRNA	NOVEL	U1	1	1	0.407521
chr1	146459449	146461859	146460654	ENSG00000277655.1	+	unprocessed_pseudogene	KNOWN	RP11-640M9.4	1	2	0.224827
chr1	146514471	146525289	146519880	ENSG00000277420.1	+	lincRNA	KNOWN	CH17-408M7.1	1	2	-0.405127
chr1	146539541	146539663	146539602	ENSG00000274408.1	-	rRNA	NOVEL	5S_rRNA	1	1	-0.110005
chr1	146547367	146914294	146730830	ENSG00000276975.1	+	transcribed_unprocessed_pseudogene	KNOWN	HYDIN2	3	76	-0.051077
chr1	146842255	146842384	146842319	ENSG00000221560.2	+	miRNA	NOVEL	AC241929.1	1	1	-0.073859
chr1	146862729	146862845	146862787	ENSG00000274450.1	-	snRNA	NOVEL	U6atac	1	1	-0.009546
chr1	146938744	146996202	146967473	ENSG00000268043.7	+	protein_coding	KNOWN	NBPF12	8	36	0.450977
chr1	146957117	146957659	146957388	ENSG00000244371.2	-	processed_pseudogene	KNOWN	PFN1P8	1	1	0.552218
chr1	147001931	147003618	147002774	ENSG00000234225.2	-	lincRNA	KNOWN	RP4-704D21.2	2	3	0.146784
chr1	147021320	147124525	147072922	ENSG00000227242.3	-	unprocessed_pseudogene	KNOWN	NBPF13P	1	28	0.107513
chr1	147050817	147052481	147051649	ENSG00000225603.3	+	processed_pseudogene	KNOWN	RP11-325P15.1	1	1	0.023279
chr1	147079746	147079870	147079808	ENSG00000201142.1	+	snRNA	KNOWN	RNVU1-8	1	1	0.282747
chr1	147082338	147083578	147082958	ENSG00000230832.3	-	processed_pseudogene	KNOWN	RP11-325P15.2	1	1	0.282747
chr1	147155106	147172550	147163828	ENSG00000131791.7	-	protein_coding	KNOWN	PRKAB2	3	8	-0.194110
chr1	147172771	147211568	147192169	ENSG00000237188.3	+	antisense	KNOWN	RP11-337C18.8	3	4	-0.146796
chr1	147173186	147252659	147212922	ENSG00000273071.1	+	processed_transcript	KNOWN	RP11-337C18.10	1	3	-0.085972
chr1	147175351	147243050	147209200	ENSG00000131781.12	-	protein_coding	KNOWN	FMO5	9	9	-0.101657
chr1	147178113	147179622	147178867	ENSG00000180867.10	+	processed_pseudogene	KNOWN	PDIA3P1	1	1	-0.021390
chr1	147203276	147204932	147204104	ENSG00000226015.2	-	processed_pseudogene	KNOWN	CCT8P1	1	1	-0.262541
chr1	147223554	147224348	147223951	ENSG00000236806.1	+	processed_pseudogene	KNOWN	RPL7AP15	1	1	-0.048381
chr1	147242641	147295766	147269203	ENSG00000131778.17	+	protein_coding	KNOWN	CHD1L	10	23	0.139465
chr1	147258885	147517875	147388380	ENSG00000278811.4	-	antisense	KNOWN	LINC00624	2	6	-0.148846
chr1	147319110	147320224	147319667	ENSG00000213226.4	+	processed_pseudogene	KNOWN	RP11-337C18.4	1	2	-0.180088
chr1	147419050	147419883	147419466	ENSG00000226653.2	+	unitary_pseudogene	KNOWN	OR13Z1P	1	1	-0.274994
chr1	147420199	147420300	147420249	ENSG00000207209.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.274994
chr1	147445579	147446133	147445856	ENSG00000272443.1	+	unprocessed_pseudogene	KNOWN	OR13Z2P	1	1	-0.212863
chr1	147482238	147482628	147482433	ENSG00000272480.1	+	unprocessed_pseudogene	KNOWN	OR13Z3P	1	1	-0.399397
chr1	147541412	147626216	147583814	ENSG00000116128.9	+	protein_coding	KNOWN	BCL9	4	11	-0.071090
chr1	147629652	147670496	147650074	ENSG00000162836.11	-	protein_coding	KNOWN	ACP6	10	10	0.373129
chr1	147689256	147689537	147689396	ENSG00000277762.1	+	misc_RNA	KNOWN	RN7SL261P	1	1	0.408324
chr1	147697794	147699335	147698564	ENSG00000227139.1	+	lincRNA	KNOWN	RP11-533N14.3	1	2	0.011821
chr1	147756199	147773362	147764780	ENSG00000265107.2	-	protein_coding	KNOWN	GJA5	3	2	0.414577
chr1	147757185	147758434	147757809	ENSG00000274415.1	+	antisense	KNOWN	RP11-433J22.2	2	2	0.365853
chr1	147777590	147788953	147783271	ENSG00000234190.1	+	lincRNA	KNOWN	RP11-433J22.3	1	2	0.614514
chr1	147840962	147842359	147841660	ENSG00000223728.3	+	processed_pseudogene	KNOWN	RP11-314N2.2	1	1	0.001018
chr1	147907956	147909257	147908606	ENSG00000121634.5	+	protein_coding	KNOWN	GJA8	1	1	-0.069759
chr1	147928393	147993521	147960957	ENSG00000188092.14	+	protein_coding	KNOWN	GPR89B	8	14	0.157815
chr1	147993862	148014956	148004409	ENSG00000215859.8	-	lincRNA	KNOWN	RP6-74O6.2	2	9	0.174304
chr1	147994301	148009592	148001946	ENSG00000244211.3	-	unprocessed_pseudogene	KNOWN	PDZK1P1	1	7	0.180926
chr1	148011799	148012228	148012013	ENSG00000273059.1	+	lincRNA	KNOWN	XXyac-YX155B6.7	1	1	0.152746
chr1	148014417	148014583	148014500	ENSG00000206791.1	-	snRNA	KNOWN	RNU1-129P	1	1	0.152746
chr1	148021850	148025931	148023890	ENSG00000274372.4	+	lincRNA	KNOWN	RP11-94I2.4	2	3	0.152746
chr1	148038753	148038916	148038834	ENSG00000206585.1	-	snRNA	KNOWN	RNVU1-7	1	1	0.187299
chr1	148080598	148093883	148087240	ENSG00000229828.2	+	unprocessed_pseudogene	KNOWN	PDE4DIPP1	1	11	0.234251
chr1	148102046	148152322	148127184	ENSG00000263956.5	-	protein_coding	KNOWN	NBPF11	6	25	0.360408
chr1	148129497	148129898	148129697	ENSG00000225080.1	+	processed_pseudogene	KNOWN	PFN1P4	1	1	0.440824
chr1	148146395	148149566	148147980	ENSG00000198658.4	+	unprocessed_pseudogene	KNOWN	ABHD17AP1	1	2	0.283176
chr1	148159213	148255012	148207112	ENSG00000227733.9	-	lincRNA	KNOWN	RP4-565E6.1	18	8	-0.076793
chr1	148162360	148186630	148174495	ENSG00000232265.7	+	lincRNA	KNOWN	XXyac-YX155B6.5	10	3	0.054932
chr1	148193716	148193838	148193777	ENSG00000238765.1	+	rRNA	KNOWN	RNA5SP57	1	1	-0.133183
chr1	148234273	148234489	148234381	ENSG00000224335.2	+	unprocessed_pseudogene	KNOWN	RP11-301M17.2	1	1	-0.159547
chr1	148246169	148246685	148246427	ENSG00000227700.1	+	processed_pseudogene	KNOWN	RP11-301M17.1	1	1	-0.159547
chr1	148263476	148263632	148263554	ENSG00000199879.1	+	snRNA	KNOWN	RNU1-120P	1	1	0.267079
chr1	148271884	148280749	148276316	ENSG00000234283.1	-	lincRNA	KNOWN	RP11-495P10.6	1	3	0.108480
chr1	148288001	148288951	148288476	ENSG00000228626.1	-	unprocessed_pseudogene	KNOWN	RP11-495P10.9	1	2	0.108480
chr1	148290889	148297271	148294080	ENSG00000231196.4	-	processed_transcript	KNOWN	RP11-495P10.7	2	6	0.139745
chr1	148295180	148297556	148296368	ENSG00000238107.1	+	lincRNA	KNOWN	RP11-495P10.5	1	2	0.139745
chr1	148317683	148318013	148317848	ENSG00000235988.1	-	processed_pseudogene	KNOWN	RP11-495P10.4	1	1	0.189458
chr1	148328999	148344636	148336817	ENSG00000224481.1	+	lincRNA	KNOWN	RP11-495P10.3	1	3	-0.088836
chr1	148330271	148330394	148330332	ENSG00000252744.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.107849
chr1	148334612	148334767	148334689	ENSG00000202408.2	-	snRNA	KNOWN	RNU1-122P	1	1	-0.107849
chr1	148358245	148358686	148358465	ENSG00000272824.1	-	lincRNA	KNOWN	RP6-74O6.6	1	1	0.313071
chr1	148362370	148362533	148362451	ENSG00000207340.1	-	snRNA	KNOWN	RNVU1-1	1	1	0.313071
chr1	148362995	148460150	148411572	ENSG00000274020.1	-	lincRNA	KNOWN	LINC01138	4	4	0.063773
chr1	148385829	148385963	148385896	ENSG00000252135.1	-	snRNA	KNOWN	RNVU1-2	1	1	0.045698
chr1	148388282	148388363	148388322	ENSG00000278596.1	+	miRNA	KNOWN	MIR6077	1	1	0.045698
chr1	148388490	148388651	148388570	ENSG00000238825.1	-	snRNA	KNOWN	RNU1-13P	1	1	0.045698
chr1	148402516	148432545	148417530	ENSG00000231551.7	+	lincRNA	KNOWN	RP11-495P10.1	6	9	0.144851
chr1	148402715	148402875	148402795	ENSG00000201183.1	+	snRNA	KNOWN	RNVU1-3	1	1	0.017294
chr1	148435105	148436926	148436015	ENSG00000225871.2	+	processed_pseudogene	KNOWN	RP11-495P10.10	1	2	0.027861
chr1	148458814	148459871	148459342	ENSG00000280649.1	+	protein_coding	KNOWN	AC245100.1	1	1	-0.193410
chr1	148479824	148483679	148481751	ENSG00000236334.2	-	protein_coding	KNOWN	PPIAL4G	1	1	-0.062454
chr1	148522601	148522765	148522683	ENSG00000274210.1	+	snRNA	NOVEL	U1	1	1	-0.303593
chr1	148531385	148679751	148605568	ENSG00000270629.5	-	protein_coding	KNOWN	NBPF14	11	71	0.392065
chr1	148739379	148739479	148739429	ENSG00000252515.2	+	snRNA	KNOWN	RNU6-1171P	1	1	0.290091
chr1	148748953	148749498	148749225	ENSG00000177144.6	+	processed_pseudogene	KNOWN	NUDT4P1	1	1	0.290091
chr1	148772640	148784594	148778617	ENSG00000275140.1	-	unprocessed_pseudogene	KNOWN	CH17-478G19.2	1	4	0.369101
chr1	148795797	148796325	148796061	ENSG00000271546.1	+	processed_pseudogene	KNOWN	RP4-725K1.1	1	1	0.284637
chr1	148808181	149048286	148928233	ENSG00000178104.19	+	protein_coding	KNOWN	PDE4DIP	50	47	0.306009
chr1	148839483	148839732	148839607	ENSG00000252656.1	-	misc_RNA	KNOWN	RN7SKP88	1	1	0.213982
chr1	148939739	148939817	148939778	ENSG00000222788.1	-	snRNA	KNOWN	RNU2-38P	1	1	0.344476
chr1	149006309	149009527	149007918	ENSG00000254913.1	-	antisense	KNOWN	RP4-791M13.5	1	3	0.315430
chr1	149007077	149007142	149007109	ENSG00000266739.1	-	miRNA	NOVEL	AC239802.1	1	1	0.315430
chr1	149018671	149026269	149022470	ENSG00000255148.2	-	antisense	KNOWN	RP4-791M13.4	1	3	0.437424
chr1	149048576	149051273	149049924	ENSG00000254539.1	+	lincRNA	KNOWN	RP4-791M13.3	1	2	0.431059
chr1	149054027	149103561	149078794	ENSG00000269713.7	-	protein_coding	KNOWN	NBPF9	9	29	0.491317
chr1	149111304	149121866	149116585	ENSG00000274019.1	-	unprocessed_pseudogene	KNOWN	CH17-78J1.1	1	3	0.367934
chr1	149162783	149162944	149162863	ENSG00000201699.1	-	snRNA	KNOWN	RNU1-59P	1	1	0.111017
chr1	149176022	149251013	149213517	ENSG00000274265.4	+	lincRNA	KNOWN	CH17-189H20.1	3	4	0.158236
chr1	149197992	149321732	149259862	ENSG00000215861.5	-	unprocessed_pseudogene	KNOWN	WI2-1896O14.1	1	7	0.284811
chr1	149264252	149264816	149264534	ENSG00000272755.1	+	lincRNA	KNOWN	RP11-326G21.1	1	1	0.172162
chr1	149290513	149290762	149290637	ENSG00000273591.1	+	misc_RNA	NOVEL	7SK	1	1	0.530998
chr1	149345661	149357612	149351636	ENSG00000274423.1	+	unprocessed_pseudogene	KNOWN	RP11-544O24.2	1	4	0.281638
chr1	149390623	149556361	149473492	ENSG00000271383.6	+	protein_coding	KNOWN	NBPF19	6	97	0.320086
chr1	149583865	149584464	149584164	ENSG00000263464.2	+	protein_coding	KNOWN	PPIAL4C	1	1	-0.382285
chr1	149606334	149679523	149642928	ENSG00000277147.4	+	lincRNA	KNOWN	LINC00869	10	9	-0.037964
chr1	149607765	149612402	149610083	ENSG00000275557.1	+	lincRNA	KNOWN	RP11-353N4.6	1	4	-0.141252
chr1	149636766	149636929	149636847	ENSG00000206828.1	+	snRNA	NOVEL	U1	1	1	-0.085795
chr1	149677498	149747812	149712655	ENSG00000234232.6	-	lincRNA	KNOWN	RP11-353N4.5	5	3	-0.008229
chr1	149700151	149700296	149700223	ENSG00000275229.1	-	snRNA	KNOWN	RNU1-68P	1	1	0.005736
chr1	149702328	149705721	149704024	ENSG00000272058.2	+	protein_coding	KNOWN	FAM231D	1	1	0.005736
chr1	149737309	149737400	149737354	ENSG00000263825.1	-	miRNA	NOVEL	AC243772.1	1	1	-0.114908
chr1	149754301	149754710	149754505	ENSG00000226500.2	-	processed_pseudogene	KNOWN	RP11-196G18.1	1	1	-0.094421
chr1	149782671	149792518	149787594	ENSG00000150337.13	+	protein_coding	KNOWN	FCGR1A	4	6	-0.123455
chr1	149782689	149812373	149797531	ENSG00000203814.6	-	protein_coding	KNOWN	HIST2H2BF	5	2	0.009945
chr1	149785659	149793020	149789339	ENSG00000233030.2	-	antisense	KNOWN	RP11-196G18.3	1	2	-0.093111
chr1	149813271	149813681	149813476	ENSG00000183598.3	-	protein_coding	KNOWN	HIST2H3D	1	1	0.468555
chr1	149832659	149839767	149836213	ENSG00000270882.2	+	protein_coding	KNOWN	HIST2H4A	4	2	0.639480
chr1	149839538	149841193	149840365	ENSG00000203811.1	-	protein_coding	KNOWN	HIST2H3C	1	1	0.639480
chr1	149842188	149842736	149842462	ENSG00000203812.2	-	protein_coding	KNOWN	HIST2H2AA3	1	1	0.639480
chr1	149842204	149886652	149864428	ENSG00000184678.9	-	protein_coding	KNOWN	HIST2H2BE	2	2	0.575157
chr1	149842355	149842495	149842425	ENSG00000281134.1	+	miRNA	NOVEL	AC239868.3	1	1	0.639480
chr1	149843041	149843533	149843287	ENSG00000220323.3	+	processed_pseudogene	KNOWN	HIST2H2BD	1	1	0.639480
chr1	149844498	149849024	149846761	ENSG00000261716.1	-	sense_overlapping	KNOWN	RP11-196G18.22	1	1	0.639480
chr1	149845816	149846486	149846151	ENSG00000272993.1	+	lincRNA	KNOWN	RP11-196G18.24	1	1	0.639480
chr1	149850193	149850772	149850482	ENSG00000203819.6	-	processed_pseudogene	KNOWN	HIST2H2BC	1	1	0.700162
chr1	149851061	149851624	149851342	ENSG00000272196.2	+	protein_coding	KNOWN	HIST2H2AA4	1	1	0.700162
chr1	149851317	149851457	149851387	ENSG00000280874.1	-	miRNA	NOVEL	AC239868.2	1	1	0.700162
chr1	149852619	149854274	149853446	ENSG00000203852.3	+	protein_coding	KNOWN	HIST2H3A	1	1	0.700162
chr1	149854045	149861210	149857627	ENSG00000270276.2	-	protein_coding	KNOWN	HIST2H4B	3	2	0.700162
chr1	149861271	149862504	149861887	ENSG00000264207.1	+	antisense	KNOWN	RP11-196G18.23	1	1	0.700162
chr1	149886975	149887364	149887169	ENSG00000184260.5	+	protein_coding	KNOWN	HIST2H2AC	1	1	0.394919
chr1	149887178	149887318	149887248	ENSG00000280566.1	-	miRNA	NOVEL	AC239868.1	1	1	0.394919
chr1	149887524	149887916	149887720	ENSG00000184270.4	-	protein_coding	KNOWN	HIST2H2AB	1	1	0.394919
chr1	149887890	149900798	149894344	ENSG00000178096.8	+	protein_coding	KNOWN	BOLA1	4	3	0.549526
chr1	149903318	149917882	149910600	ENSG00000159164.9	-	protein_coding	KNOWN	SV2A	2	13	0.726140
chr1	149923317	149928344	149925830	ENSG00000143368.9	-	protein_coding	KNOWN	SF3B4	2	6	0.850234
chr1	149928651	149936898	149932774	ENSG00000014914.19	-	protein_coding	KNOWN	MTMR11	10	17	0.640252
chr1	149937812	150010676	149974244	ENSG00000264522.5	-	protein_coding	KNOWN	OTUD7B	3	12	0.444502
chr1	150053864	150055034	150054449	ENSG00000223945.2	+	processed_pseudogene	KNOWN	RP11-458I7.1	1	2	0.417568
chr1	150067293	150145327	150106310	ENSG00000136631.12	+	protein_coding	KNOWN	VPS45	13	15	0.452962
chr1	150149183	150164720	150156951	ENSG00000023902.13	+	protein_coding	KNOWN	PLEKHO1	9	6	0.606891
chr1	150211632	150211925	150211778	ENSG00000266187.2	+	misc_RNA	KNOWN	RN7SL480P	1	1	0.712498
chr1	150218417	150236156	150227286	ENSG00000143401.14	-	protein_coding	KNOWN	ANP32E	10	7	0.651190
chr1	150236967	150237156	150237061	ENSG00000222222.1	+	snRNA	KNOWN	RNU2-17P	1	1	0.535862
chr1	150255095	150257286	150256190	ENSG00000276110.1	-	antisense	KNOWN	RP4-790G17.7	1	2	0.642416
chr1	150257159	150265078	150261118	ENSG00000118298.10	+	protein_coding	KNOWN	CA14	5	11	0.642416
chr1	150265399	150269580	150267489	ENSG00000117362.12	-	protein_coding	KNOWN	APH1A	9	7	0.642416
chr1	150268200	150280916	150274558	ENSG00000118292.8	+	protein_coding	KNOWN	C1orf54	3	8	0.683059
chr1	150282543	150287093	150284818	ENSG00000159208.15	+	protein_coding	KNOWN	CIART	7	6	0.689756
chr1	150293720	150308979	150301349	ENSG00000266472.5	+	protein_coding	KNOWN	MRPS21	2	3	0.548370
chr1	150302770	150303291	150303030	ENSG00000278939.1	-	protein_coding	KNOWN	AC242988.1	1	2	0.548370
chr1	150321476	150353195	150337335	ENSG00000117360.12	+	protein_coding	KNOWN	PRPF3	7	16	0.598753
chr1	150363091	150476566	150419828	ENSG00000163125.15	+	protein_coding	KNOWN	RPRD2	4	11	0.479290
chr1	150487364	150507609	150497486	ENSG00000143374.14	+	protein_coding	KNOWN	TARS2	14	18	0.672702
chr1	150508062	150513789	150510925	ENSG00000143369.14	+	protein_coding	KNOWN	ECM1	7	10	0.779443
chr1	150515757	150518032	150516894	ENSG00000228126.1	+	lincRNA	KNOWN	FALEC	1	2	0.840653
chr1	150548562	150557724	150553143	ENSG00000237781.3	-	antisense	KNOWN	RP11-54A4.2	1	6	0.977578
chr1	150549369	150560937	150555153	ENSG00000143382.13	+	protein_coding	KNOWN	ADAMTSL4	7	20	0.990689
chr1	150551929	150552014	150551971	ENSG00000264553.1	+	miRNA	KNOWN	MIR4257	1	1	0.997664
chr1	150560202	150574552	150567377	ENSG00000203804.4	-	processed_transcript	KNOWN	ADAMTSL4-AS1	3	4	1.011881
chr1	150566562	150566860	150566711	ENSG00000277452.1	-	misc_RNA	KNOWN	RN7SL473P	1	1	0.997664
chr1	150568971	150569269	150569120	ENSG00000274963.1	-	misc_RNA	KNOWN	RN7SL600P	1	1	0.997664
chr1	150574551	150579738	150577144	ENSG00000143384.12	-	protein_coding	KNOWN	MCL1	4	4	1.042472
chr1	150600539	150600659	150600599	ENSG00000253047.1	-	snoRNA	NOVEL	SNORA40	1	1	0.864363
chr1	150600851	150629612	150615231	ENSG00000143420.17	-	protein_coding	KNOWN	ENSA	14	5	0.842755
chr1	150608507	150608623	150608565	ENSG00000276103.1	-	snRNA	NOVEL	U4	1	1	0.864363
chr1	150646225	150697144	150671684	ENSG00000143457.10	-	protein_coding	KNOWN	GOLPH3L	3	6	0.416774
chr1	150698060	150720888	150709474	ENSG00000143452.15	-	protein_coding	KNOWN	HORMAD1	8	15	0.039179
chr1	150701866	150701972	150701919	ENSG00000206931.1	+	snRNA	KNOWN	RNU6-1042P	1	1	0.359096
chr1	150730196	150765957	150748076	ENSG00000163131.10	-	protein_coding	KNOWN	CTSS	6	8	0.508495
chr1	150780272	150780644	150780458	ENSG00000236713.1	+	processed_pseudogene	KNOWN	RP11-363I22.3	1	1	0.356369
chr1	150796208	150808323	150802265	ENSG00000143387.12	-	protein_coding	KNOWN	CTSK	3	8	0.393936
chr1	150800473	150801031	150800752	ENSG00000224690.2	+	processed_pseudogene	KNOWN	UBE2D3P3	1	2	0.393936
chr1	150809705	150876768	150843236	ENSG00000143437.20	-	protein_coding	KNOWN	ARNT	12	23	0.454954
chr1	150812591	150812698	150812644	ENSG00000200175.1	-	snRNA	KNOWN	RNU6-1309P	1	1	0.405927
chr1	150881236	150881683	150881459	ENSG00000224800.1	-	processed_pseudogene	KNOWN	RP11-235D19.2	1	1	0.606565
chr1	150903896	150904213	150904054	ENSG00000229357.1	+	processed_pseudogene	KNOWN	CYCSP51	1	1	0.561938
chr1	150926263	150964744	150945503	ENSG00000143379.12	+	protein_coding	KNOWN	SETDB1	17	22	0.850420
chr1	150960583	150975004	150967793	ENSG00000143418.19	-	protein_coding	KNOWN	CERS2	14	11	0.820263
chr1	150965245	150966256	150965750	ENSG00000259357.2	+	antisense	KNOWN	RP11-316M1.12	2	2	0.775207
chr1	150973123	150975534	150974328	ENSG00000231073.1	+	antisense	KNOWN	RP11-316M1.3	1	3	0.905029
chr1	150982017	150995634	150988825	ENSG00000143412.9	+	protein_coding	KNOWN	ANXA9	2	14	0.863750
chr1	150996086	151008375	151002230	ENSG00000143409.15	-	protein_coding	KNOWN	FAM63A	7	11	0.805278
chr1	151008420	151035713	151022066	ENSG00000143363.15	+	protein_coding	KNOWN	PRUNE	10	8	0.955149
chr1	151022746	151022852	151022799	ENSG00000200759.1	-	snRNA	KNOWN	RNU6-884P	1	1	0.989422
chr1	151036570	151047600	151042085	ENSG00000163141.18	+	protein_coding	KNOWN	BNIPL	6	10	0.876603
chr1	151047740	151051986	151049863	ENSG00000143443.9	+	protein_coding	KNOWN	C1orf56	3	3	0.863103
chr1	151050971	151070325	151060648	ENSG00000197622.12	-	protein_coding	KNOWN	CDC42SE1	7	8	0.847572
chr1	151057758	151068497	151063127	ENSG00000213190.3	+	protein_coding	KNOWN	MLLT11	1	2	0.847755
chr1	151070578	151125542	151098060	ENSG00000143458.11	+	protein_coding	KNOWN	GABPB2	6	9	0.631718
chr1	151111912	151112728	151112320	ENSG00000233717.1	-	processed_pseudogene	KNOWN	RP11-68I18.2	1	3	0.595490
chr1	151130075	151131610	151130842	ENSG00000261168.1	-	sense_overlapping	KNOWN	RP11-68I18.10	1	1	0.740961
chr1	151131685	151146664	151139174	ENSG00000143434.15	-	protein_coding	KNOWN	SEMA6C	10	20	0.740961
chr1	151156629	151159749	151158189	ENSG00000163154.5	+	protein_coding	KNOWN	TNFAIP8L2	1	2	0.746217
chr1	151156664	151170297	151163480	ENSG00000163156.11	+	protein_coding	KNOWN	SCNM1	7	7	0.749105
chr1	151159748	151165948	151162848	ENSG00000163155.11	-	protein_coding	KNOWN	LYSMD1	2	3	0.746217
chr1	151169986	151176284	151173135	ENSG00000163157.14	-	protein_coding	KNOWN	TMOD4	6	10	0.878080
chr1	151169987	151195321	151182654	ENSG00000163159.11	-	protein_coding	KNOWN	VPS72	6	13	0.815518
chr1	151197949	151249536	151223742	ENSG00000143398.19	+	protein_coding	KNOWN	PIP5K1A	17	16	0.783222
chr1	151254703	151267479	151261091	ENSG00000159352.15	+	protein_coding	KNOWN	PSMD4	12	10	0.679938
chr1	151280024	151281929	151280976	ENSG00000232671.5	-	antisense	KNOWN	RP11-126K1.2	2	2	0.868217
chr1	151281618	151292180	151286899	ENSG00000143373.17	+	protein_coding	KNOWN	ZNF687	7	10	0.913499
chr1	151291797	151327715	151309756	ENSG00000143393.16	-	protein_coding	KNOWN	PI4KB	13	13	0.869652
chr1	151300665	151300964	151300814	ENSG00000265753.2	-	misc_RNA	KNOWN	RN7SL444P	1	1	1.087504
chr1	151327949	151328429	151328189	ENSG00000273481.1	+	lincRNA	KNOWN	RP11-126K1.9	1	1	0.645824
chr1	151340640	151347357	151343998	ENSG00000143390.17	-	protein_coding	KNOWN	RFX5	21	11	0.630544
chr1	151340648	151341966	151341307	ENSG00000224645.1	+	antisense	KNOWN	RP11-126K1.8	1	2	0.630544
chr1	151346967	151348027	151347497	ENSG00000237976.1	+	antisense	KNOWN	RP11-126K1.6	1	2	0.630544
chr1	151364302	151372733	151368517	ENSG00000143416.20	-	protein_coding	KNOWN	SELENBP1	19	12	0.613358
chr1	151399534	151401944	151400739	ENSG00000159377.10	+	protein_coding	KNOWN	PSMB4	7	7	0.707074
chr1	151402724	151459465	151431094	ENSG00000143442.21	-	protein_coding	KNOWN	POGZ	21	19	0.421406
chr1	151439000	151439095	151439047	ENSG00000238711.1	+	misc_RNA	KNOWN	RNY4P25	1	1	0.253273
chr1	151510510	151538692	151524601	ENSG00000143375.14	+	protein_coding	KNOWN	CGN	8	21	0.573997
chr1	151527831	151527938	151527884	ENSG00000252840.1	-	snoRNA	NOVEL	SNORA44	1	1	0.521903
chr1	151540305	151583583	151561944	ENSG00000143367.15	+	protein_coding	KNOWN	TUFT1	7	13	0.658715
chr1	151540516	151561855	151551185	ENSG00000232536.1	+	sense_intronic	KNOWN	RP11-74C1.4	1	2	0.681556
chr1	151545796	151545891	151545843	ENSG00000207606.1	+	miRNA	KNOWN	MIR554	1	1	0.690787
chr1	151557446	151557940	151557693	ENSG00000223861.1	+	processed_pseudogene	KNOWN	RP11-74C1.2	1	1	0.674172
chr1	151612038	151613363	151612700	ENSG00000250734.2	-	antisense	KNOWN	RP11-404E16.1	1	2	0.294932
chr1	151612065	151699091	151655578	ENSG00000143376.12	+	protein_coding	KNOWN	SNX27	5	12	0.192125
chr1	151629324	151629430	151629377	ENSG00000206635.1	+	snRNA	KNOWN	RNU6-1062P	1	1	0.294932
chr1	151701026	151708386	151704706	ENSG00000227045.1	+	antisense	KNOWN	RP11-98D18.1	1	2	0.370293
chr1	151702404	151716814	151709609	ENSG00000159409.14	-	protein_coding	KNOWN	CELF3	7	14	0.509913
chr1	151710433	151729805	151720119	ENSG00000178796.12	+	protein_coding	KNOWN	RIIAD1	6	9	0.665513
chr1	151747597	151747700	151747648	ENSG00000206980.1	-	snRNA	KNOWN	RNU6-662P	1	1	0.695434
chr1	151755541	151759911	151757726	ENSG00000269621.1	+	antisense	KNOWN	RP11-98D18.15	1	2	0.267310
chr1	151757659	151758442	151758050	ENSG00000236940.1	+	processed_pseudogene	KNOWN	RP11-98D18.7	1	2	0.267310
chr1	151759643	151763564	151761603	ENSG00000143436.10	-	protein_coding	KNOWN	MRPL9	11	7	0.267310
chr1	151762899	151771334	151767116	ENSG00000143450.15	+	protein_coding	KNOWN	OAZ3	10	6	0.318196
chr1	151763384	151769501	151766442	ENSG00000249602.1	-	antisense	KNOWN	RP11-98D18.3	1	3	0.267310
chr1	151765709	151766389	151766049	ENSG00000232937.1	+	sense_intronic	KNOWN	RP11-98D18.2	1	2	0.267310
chr1	151766486	151767000	151766743	ENSG00000268288.1	-	antisense	KNOWN	RP11-98D18.16	1	1	0.267310
chr1	151770107	151791416	151780761	ENSG00000182134.15	-	protein_coding	KNOWN	TDRKH	15	15	0.570190
chr1	151790804	151794402	151792603	ENSG00000203288.3	+	antisense	KNOWN	RP11-98D18.9	2	2	0.308616
chr1	151798054	151798602	151798328	ENSG00000269489.1	+	lincRNA	KNOWN	RP11-98D18.17	1	1	0.308616
chr1	151800264	151806154	151803209	ENSG00000213171.2	-	protein_coding	KNOWN	LINGO4	1	2	0.308616
chr1	151806071	151831872	151818971	ENSG00000143365.16	-	protein_coding	KNOWN	RORC	3	11	0.832212
chr1	151837819	151840557	151839188	ENSG00000225556.1	-	protein_coding	KNOWN	C2CD4D	1	2	0.769124
chr1	151841736	151841837	151841786	ENSG00000201134.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.769124
chr1	151841877	151850385	151846131	ENSG00000234614.1	+	antisense	KNOWN	AL450992.2	1	3	0.756022
chr1	151847263	151853697	151850480	ENSG00000196407.11	-	protein_coding	KNOWN	THEM5	2	6	0.603147
chr1	151873584	151909808	151891696	ENSG00000159445.12	-	protein_coding	KNOWN	THEM4	5	7	-0.006054
chr1	151949523	151950912	151950217	ENSG00000223810.2	-	processed_pseudogene	KNOWN	KRT8P28	1	1	0.092725
chr1	151982915	151994390	151988652	ENSG00000197747.8	-	protein_coding	KNOWN	S100A10	4	4	0.433635
chr1	151994531	152042774	152018652	ENSG00000229021.2	+	antisense	KNOWN	AL591893.1	1	13	0.264174
chr1	152018662	152022508	152020585	ENSG00000240667.1	+	unprocessed_pseudogene	KNOWN	AL450992.6	1	4	0.186035
chr1	152032506	152047907	152040206	ENSG00000163191.5	-	protein_coding	KNOWN	S100A11	2	3	0.209124
chr1	152077952	152078211	152078081	ENSG00000232678.2	+	processed_pseudogene	KNOWN	SPTLC1P4	1	1	-0.014398
chr1	152084144	152089064	152086604	ENSG00000182898.3	-	protein_coding	KNOWN	TCHHL1	1	3	-0.014398
chr1	152106317	152115454	152110885	ENSG00000159450.12	-	protein_coding	KNOWN	TCHH	2	3	-0.070023
chr1	152122534	152125065	152123799	ENSG00000226716.1	+	antisense	KNOWN	AL589986.2	1	2	0.067879
chr1	152124016	152196699	152160357	ENSG00000233792.3	-	transcribed_processed_pseudogene	KNOWN	PUDPP2	2	2	-0.178184
chr1	152153595	152159228	152156411	ENSG00000215853.3	-	protein_coding	KNOWN	RPTN	1	3	-0.009888
chr1	152168125	152445456	152306790	ENSG00000237975.6	+	antisense	KNOWN	FLG-AS1	9	9	-0.150400
chr1	152205858	152207057	152206457	ENSG00000236427.1	+	lincRNA	KNOWN	RP11-107M16.2	1	2	0.126140
chr1	152212082	152224193	152218137	ENSG00000197915.5	-	protein_coding	KNOWN	HRNR	1	3	0.002289
chr1	152302175	152325203	152313689	ENSG00000143631.10	-	protein_coding	KNOWN	FLG	1	3	-0.043949
chr1	152348735	152360006	152354370	ENSG00000143520.6	-	protein_coding	KNOWN	FLG2	1	3	-0.012011
chr1	152399577	152399769	152399673	ENSG00000183586.8	+	processed_pseudogene	KNOWN	HMGN3P1	1	1	-0.076763
chr1	152409243	152414263	152411753	ENSG00000143536.7	-	protein_coding	KNOWN	CRNN	1	3	-0.254331
chr1	152510844	152512177	152511510	ENSG00000186207.4	+	protein_coding	KNOWN	LCE5A	1	2	0.069624
chr1	152511535	152601086	152556310	ENSG00000244057.3	+	protein_coding	KNOWN	LCE3C	2	2	-0.144738
chr1	152511791	152512783	152512287	ENSG00000279850.1	-	protein_coding	KNOWN	AL135842.1	1	2	0.069624
chr1	152514502	152516010	152515256	ENSG00000169509.5	+	protein_coding	KNOWN	CRCT1	1	2	0.069624
chr1	152565654	152566772	152566213	ENSG00000185966.3	-	protein_coding	KNOWN	LCE3E	1	2	-0.216130
chr1	152579381	152580504	152579942	ENSG00000163202.4	-	protein_coding	KNOWN	LCE3D	1	2	0.064335
chr1	152613811	152614098	152613954	ENSG00000187238.5	+	protein_coding	KNOWN	LCE3B	1	1	-0.337260
chr1	152622834	152623103	152622968	ENSG00000185962.1	-	protein_coding	KNOWN	LCE3A	1	1	-0.337260
chr1	152644393	152644717	152644555	ENSG00000226947.1	-	unprocessed_pseudogene	KNOWN	RP1-52J10.9	1	1	-0.216846
chr1	152655477	152656804	152656140	ENSG00000176075.7	+	lincRNA	KNOWN	LINC00302	1	3	-0.449198
chr1	152663396	152664659	152664027	ENSG00000187223.3	+	protein_coding	KNOWN	LCE2D	1	2	-0.449198
chr1	152675295	152676574	152675934	ENSG00000187180.3	+	protein_coding	KNOWN	LCE2C	1	2	-0.157368
chr1	152686123	152687401	152686762	ENSG00000159455.8	+	protein_coding	KNOWN	LCE2B	1	2	-0.157368
chr1	152698364	152699442	152698903	ENSG00000187173.3	+	protein_coding	KNOWN	LCE2A	1	2	-0.103673
chr1	152708160	152709491	152708825	ENSG00000187170.4	+	protein_coding	KNOWN	LCE4A	2	2	-0.103673
chr1	152719522	152720470	152719996	ENSG00000198854.5	+	protein_coding	KNOWN	C1orf68	1	1	-0.211558
chr1	152737518	152737868	152737693	ENSG00000229713.1	+	unprocessed_pseudogene	KNOWN	RP1-43O17.1	1	1	-0.259481
chr1	152744299	152744606	152744452	ENSG00000233819.1	+	unprocessed_pseudogene	KNOWN	RP1-43O17.2	1	1	-0.259481
chr1	152759561	152762052	152760806	ENSG00000203786.6	+	protein_coding	KNOWN	KPRP	1	1	-0.172554
chr1	152776372	152776728	152776550	ENSG00000240386.3	+	protein_coding	KNOWN	LCE1F	1	1	0.213178
chr1	152786214	152788426	152787320	ENSG00000186226.8	+	protein_coding	KNOWN	LCE1E	3	2	0.213178
chr1	152796751	152798181	152797466	ENSG00000172155.9	+	protein_coding	KNOWN	LCE1D	1	2	-0.488294
chr1	152804835	152806628	152805731	ENSG00000197084.5	-	protein_coding	KNOWN	LCE1C	2	3	-0.488294
chr1	152811971	152813109	152812540	ENSG00000196734.8	+	protein_coding	KNOWN	LCE1B	1	1	-0.140051
chr1	152827473	152827894	152827683	ENSG00000186844.5	+	protein_coding	KNOWN	LCE1A	1	1	-0.140051
chr1	152842868	152843983	152843425	ENSG00000235942.2	+	protein_coding	KNOWN	LCE6A	1	2	-0.323046
chr1	152878317	152885047	152881682	ENSG00000163206.5	+	protein_coding	KNOWN	SMCP	1	2	-0.293899
chr1	152908545	152911886	152910215	ENSG00000163207.6	+	protein_coding	KNOWN	IVL	1	2	-0.205883
chr1	152930040	152949210	152939625	ENSG00000224308.1	-	antisense	KNOWN	LINC01527	1	2	0.041660
chr1	152970666	152972574	152971620	ENSG00000184148.3	+	protein_coding	KNOWN	SPRR4	1	2	0.114476
chr1	152985231	152985500	152985365	ENSG00000169474.4	+	protein_coding	KNOWN	SPRR1A	1	1	0.114476
chr1	153001747	153003856	153002801	ENSG00000163209.14	+	protein_coding	KNOWN	SPRR3	4	3	0.143522
chr1	153012482	153012614	153012548	ENSG00000252920.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.221899
chr1	153023962	153024260	153024111	ENSG00000234262.1	+	unprocessed_pseudogene	KNOWN	RP1-20N18.4	1	1	-0.221899
chr1	153031202	153032900	153032051	ENSG00000169469.8	+	protein_coding	KNOWN	SPRR1B	1	2	-0.194126
chr1	153039725	153041931	153040828	ENSG00000163216.6	-	protein_coding	KNOWN	SPRR2D	4	3	-0.194126
chr1	153056113	153057537	153056825	ENSG00000241794.1	-	protein_coding	KNOWN	SPRR2A	1	2	-0.148323
chr1	153070224	153070840	153070532	ENSG00000196805.7	-	protein_coding	KNOWN	SPRR2B	1	1	-0.283766
chr1	153093135	153106184	153099659	ENSG00000203785.8	-	protein_coding	KNOWN	SPRR2E	2	2	-0.583046
chr1	153112114	153113515	153112814	ENSG00000244094.1	-	protein_coding	KNOWN	SPRR2F	1	2	-0.178656
chr1	153140491	153140709	153140600	ENSG00000229035.2	-	unprocessed_pseudogene	KNOWN	SPRR2C	1	1	-0.385781
chr1	153149582	153150869	153150225	ENSG00000159516.8	-	protein_coding	KNOWN	SPRR2G	1	2	-0.211236
chr1	153174518	153191676	153183097	ENSG00000229699.1	+	lincRNA	KNOWN	RP1-140J1.1	1	3	-0.144271
chr1	153203443	153205120	153204281	ENSG00000203784.2	+	protein_coding	KNOWN	LELP1	1	2	-0.139678
chr1	153217584	153219317	153218450	ENSG00000203783.4	+	protein_coding	KNOWN	PRR9	1	2	0.030591
chr1	153225080	153226006	153225543	ENSG00000230779.1	+	processed_pseudogene	KNOWN	RP1-140J1.4	1	1	0.030591
chr1	153259700	153262122	153260911	ENSG00000203782.5	+	protein_coding	KNOWN	LOR	1	2	-0.169676
chr1	153297862	153310718	153304290	ENSG00000159527.3	-	protein_coding	KNOWN	PGLYRP3	1	7	0.047677
chr1	153330120	153348840	153339480	ENSG00000163218.14	-	protein_coding	KNOWN	PGLYRP4	3	9	-0.111803
chr1	153331622	153331728	153331675	ENSG00000207321.1	+	snRNA	KNOWN	RNU6-160P	1	1	-0.111803
chr1	153357854	153361027	153359440	ENSG00000163220.10	+	protein_coding	KNOWN	S100A9	1	3	0.559644
chr1	153373706	153375649	153374677	ENSG00000163221.8	-	protein_coding	KNOWN	S100A12	1	3	0.215003
chr1	153379821	153380799	153380310	ENSG00000237008.2	-	processed_pseudogene	KNOWN	LAPTM4BP1	1	2	0.215003
chr1	153390032	153391188	153390610	ENSG00000143546.9	-	protein_coding	KNOWN	S100A8	3	3	0.218169
chr1	153396591	153396771	153396681	ENSG00000224784.2	-	processed_pseudogene	KNOWN	AL591704.7	1	1	0.218169
chr1	153416524	153423225	153419874	ENSG00000184330.11	+	protein_coding	KNOWN	S100A7A	3	3	0.236382
chr1	153427020	153428401	153427710	ENSG00000203781.4	-	unprocessed_pseudogene	KNOWN	AL591704.9	1	2	0.236382
chr1	153437058	153439949	153438503	ENSG00000197364.6	-	protein_coding	KNOWN	S100A7L2	1	3	0.141139
chr1	153457744	153460701	153459222	ENSG00000143556.8	-	protein_coding	KNOWN	S100A7	2	3	0.276416
chr1	153500463	153500764	153500613	ENSG00000263841.2	-	misc_RNA	KNOWN	RN7SL44P	1	1	0.258502
chr1	153533603	153535115	153534359	ENSG00000238279.1	+	antisense	KNOWN	BX470102.3	1	2	0.664176
chr1	153534599	153536244	153535421	ENSG00000197956.9	-	protein_coding	KNOWN	S100A6	5	4	0.664176
chr1	153537147	153541765	153539456	ENSG00000196420.7	-	protein_coding	KNOWN	S100A5	2	4	0.664176
chr1	153543613	153550136	153546874	ENSG00000196154.11	-	protein_coding	KNOWN	S100A4	6	4	0.670065
chr1	153547329	153549372	153548350	ENSG00000188015.9	-	protein_coding	KNOWN	S100A3	2	3	0.664176
chr1	153561108	153567890	153564499	ENSG00000196754.10	-	protein_coding	KNOWN	S100A2	6	4	0.944561
chr1	153606886	153613145	153610015	ENSG00000188643.10	-	protein_coding	KNOWN	S100A16	5	3	0.585546
chr1	153614255	153616986	153615620	ENSG00000189334.8	-	protein_coding	KNOWN	S100A14	6	5	0.863609
chr1	153618787	153631360	153625073	ENSG00000189171.14	-	protein_coding	KNOWN	S100A13	6	5	0.853159
chr1	153626332	153634340	153630336	ENSG00000271853.5	-	processed_transcript	KNOWN	RP1-178F15.5	3	7	0.811278
chr1	153627926	153632039	153629982	ENSG00000160678.11	+	protein_coding	KNOWN	S100A1	5	4	0.815728
chr1	153631438	153634397	153632917	ENSG00000272030.1	-	antisense	KNOWN	RP1-178F15.4	2	5	0.767072
chr1	153633982	153646306	153640144	ENSG00000160679.12	+	protein_coding	KNOWN	CHTOP	7	6	0.767072
chr1	153658654	153661830	153660242	ENSG00000143553.10	+	protein_coding	KNOWN	SNAPIN	4	4	0.859107
chr1	153661788	153671048	153666418	ENSG00000143621.16	-	protein_coding	KNOWN	ILF2	5	14	0.842256
chr1	153678637	153693992	153686314	ENSG00000169418.9	+	protein_coding	KNOWN	NPR1	3	22	0.786386
chr1	153689705	153689793	153689749	ENSG00000274940.1	-	miRNA	KNOWN	MIR8083	1	1	0.710357
chr1	153704088	153704385	153704236	ENSG00000242565.3	+	misc_RNA	KNOWN	RN7SL372P	1	1	1.002724
chr1	153717303	153718347	153717825	ENSG00000235015.1	-	processed_pseudogene	KNOWN	GEMIN2P1	1	2	0.578731
chr1	153726252	153726353	153726302	ENSG00000199565.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.578731
chr1	153728067	153774808	153751437	ENSG00000143624.13	+	protein_coding	KNOWN	INTS3	11	31	0.546602
chr1	153746851	153751227	153749039	ENSG00000243613.1	-	antisense	KNOWN	RP11-216N14.8	1	2	0.572458
chr1	153750983	153752176	153751579	ENSG00000233222.2	-	antisense	KNOWN	RP11-216N14.9	1	2	0.312543
chr1	153772371	153774079	153773225	ENSG00000279767.1	-	protein_coding	KNOWN	AL513523.2	1	4	0.977920
chr1	153774354	153780157	153777255	ENSG00000143554.13	+	protein_coding	KNOWN	SLC27A3	14	11	0.977920
chr1	153785720	153785821	153785770	ENSG00000207039.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.977920
chr1	153793947	153802091	153798019	ENSG00000231827.3	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-216N14.5	2	11	0.606565
chr1	153804725	153922975	153863850	ENSG00000143614.8	-	protein_coding	KNOWN	GATAD2B	7	11	0.687785
chr1	153852106	153853414	153852760	ENSG00000223599.1	-	processed_pseudogene	KNOWN	RP11-216N14.7	1	1	0.785565
chr1	153890595	153890865	153890730	ENSG00000236327.2	+	processed_pseudogene	KNOWN	RP11-759F5.1	1	1	0.415606
chr1	153929501	153946696	153938098	ENSG00000198837.9	-	protein_coding	KNOWN	DENND4B	13	28	0.973860
chr1	153947669	153958625	153953147	ENSG00000160741.16	-	protein_coding	KNOWN	CRTC2	10	14	1.012966
chr1	153959099	153968184	153963641	ENSG00000143570.17	-	protein_coding	KNOWN	SLC39A1	11	5	1.020314
chr1	153962351	153962420	153962385	ENSG00000276584.1	-	miRNA	KNOWN	MIR6737	1	1	1.020314
chr1	153964361	153965070	153964715	ENSG00000282386.1	+	antisense	KNOWN	RP11-422P24.12	1	1	1.020314
chr1	153966516	153966930	153966723	ENSG00000273026.1	+	antisense	KNOWN	RP11-422P24.10	1	1	1.020314
chr1	153967534	153974363	153970948	ENSG00000143578.15	+	protein_coding	KNOWN	CREB3L4	13	10	0.945933
chr1	153974269	153977688	153975978	ENSG00000143543.14	-	protein_coding	KNOWN	JTB	6	5	0.903919
chr1	153977743	153979160	153978451	ENSG00000272654.1	+	lincRNA	KNOWN	RP11-422P24.11	1	1	0.903919
chr1	153981617	153986358	153983987	ENSG00000143545.8	-	protein_coding	KNOWN	RAB13	5	8	0.903919
chr1	153990759	153992150	153991454	ENSG00000177954.11	+	protein_coding	KNOWN	RPS27	4	5	0.999584
chr1	153992685	154155116	154073900	ENSG00000143552.9	-	protein_coding	KNOWN	NUP210L	3	40	0.469927
chr1	153995632	153995960	153995796	ENSG00000231416.1	+	processed_pseudogene	KNOWN	RP11-422P24.9	1	1	0.999584
chr1	154039916	154040022	154039969	ENSG00000200220.1	-	snRNA	KNOWN	RNU6-179P	1	1	0.397700
chr1	154078866	154079963	154079414	ENSG00000231837.2	+	processed_pseudogene	KNOWN	RPS7P2	1	2	0.375164
chr1	154104521	154104592	154104556	ENSG00000263987.1	-	miRNA	KNOWN	MIR5698	1	1	0.242234
chr1	154155304	154194648	154174976	ENSG00000143549.19	-	protein_coding	KNOWN	TPM3	23	10	0.701247
chr1	154166245	154166549	154166397	ENSG00000264384.2	-	misc_RNA	KNOWN	RN7SL431P	1	1	0.683618
chr1	154193642	154193753	154193697	ENSG00000215938.2	-	miRNA	KNOWN	MIR190B	1	1	1.052463
chr1	154199372	154206333	154202852	ENSG00000163263.6	-	protein_coding	KNOWN	C1orf189	1	4	1.052463
chr1	154206706	154220628	154213667	ENSG00000143612.18	-	protein_coding	KNOWN	C1orf43	9	7	0.856598
chr1	154220179	154271510	154245844	ENSG00000143569.18	+	protein_coding	KNOWN	UBAP2L	20	27	0.737479
chr1	154254444	154254522	154254483	ENSG00000252817.2	+	miRNA	NOVEL	AL590431.1	1	1	0.790990
chr1	154259727	154259862	154259794	ENSG00000201129.1	+	snoRNA	NOVEL	SNORA58	1	1	0.790990
chr1	154272511	154275875	154274193	ENSG00000143575.14	+	protein_coding	KNOWN	HAX1	11	7	0.979517
chr1	154288460	154288527	154288493	ENSG00000252682.1	+	snoRNA	NOVEL	SNORD59	1	1	0.979517
chr1	154295503	154295601	154295552	ENSG00000212292.1	+	snRNA	KNOWN	RNU6-239P	1	1	0.515800
chr1	154297650	154297748	154297699	ENSG00000222457.1	+	snRNA	KNOWN	RNU6-121P	1	1	0.515800
chr1	154312462	154313084	154312773	ENSG00000278694.1	+	unprocessed_pseudogene	KNOWN	RP11-137P24.5	1	2	0.582832
chr1	154321090	154325325	154323207	ENSG00000143595.12	+	protein_coding	KNOWN	AQP10	3	6	0.582832
chr1	154325553	154351307	154338430	ENSG00000143515.16	+	protein_coding	KNOWN	ATP8B2	6	28	1.031680
chr1	154376966	154379273	154378119	ENSG00000237920.2	-	unprocessed_pseudogene	KNOWN	RP11-350G8.4	1	3	0.755428
chr1	154378207	154379089	154378648	ENSG00000226855.1	-	processed_pseudogene	KNOWN	RPSAP17	1	1	0.755428
chr1	154402328	154406564	154404446	ENSG00000228013.1	-	antisense	KNOWN	RP11-350G8.5	1	2	0.691112
chr1	154405193	154469450	154437321	ENSG00000160712.12	+	protein_coding	KNOWN	IL6R	8	10	0.898517
chr1	154414369	154415137	154414753	ENSG00000228264.1	-	processed_pseudogene	KNOWN	PSMD8P1	1	1	1.008525
chr1	154469772	154502113	154485942	ENSG00000169291.9	-	protein_coding	KNOWN	SHE	3	6	0.612999
chr1	154480012	154481501	154480756	ENSG00000273110.1	+	antisense	KNOWN	RP11-350G8.9	1	2	0.728929
chr1	154502219	154548147	154525183	ENSG00000163239.12	+	protein_coding	KNOWN	TDRD10	5	13	0.483750
chr1	154548577	154559028	154553802	ENSG00000160714.9	-	protein_coding	KNOWN	UBE2Q1	7	13	1.089637
chr1	154553609	154555017	154554313	ENSG00000229780.1	+	antisense	KNOWN	UBE2Q1-AS1	1	2	1.188068
chr1	154567781	154580026	154573903	ENSG00000160716.4	+	protein_coding	KNOWN	CHRNB2	1	6	0.984230
chr1	154579065	154579663	154579364	ENSG00000233875.1	-	antisense	KNOWN	RP11-61L14.6	1	2	0.939140
chr1	154582062	154627999	154605030	ENSG00000160710.15	-	protein_coding	KNOWN	ADAR	10	15	0.739322
chr1	154610493	154610586	154610539	ENSG00000278405.1	-	miRNA	NOVEL	AL606500.1	1	1	0.838060
chr1	154697455	154870280	154783867	ENSG00000143603.18	-	protein_coding	KNOWN	KCNN3	5	9	0.571308
chr1	154924734	154936991	154930862	ENSG00000163344.5	-	protein_coding	KNOWN	PMVK	1	5	0.883083
chr1	154937370	154938059	154937714	ENSG00000270361.1	+	lincRNA	KNOWN	RP11-307C12.13	1	1	0.975074
chr1	154944076	154956123	154950099	ENSG00000163346.16	-	protein_coding	KNOWN	PBXIP1	6	11	1.131673
chr1	154950210	154950492	154950351	ENSG00000268154.2	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.283133
chr1	154957026	154963853	154960439	ENSG00000163348.3	-	protein_coding	KNOWN	PYGO2	3	3	1.283133
chr1	154961825	154962623	154962224	ENSG00000271380.1	+	antisense	KNOWN	RP11-307C12.12	1	1	1.283133
chr1	154962298	154974395	154968346	ENSG00000160691.18	-	protein_coding	KNOWN	SHC1	11	13	1.222534
chr1	154974653	154979249	154976951	ENSG00000173207.12	+	protein_coding	KNOWN	CKS1B	7	3	1.116376
chr1	154975693	154975783	154975738	ENSG00000264349.1	+	miRNA	KNOWN	MIR4258	1	1	1.116376
chr1	154983338	154993111	154988224	ENSG00000160688.18	+	protein_coding	KNOWN	FLAD1	12	8	1.127132
chr1	154993586	154994315	154993950	ENSG00000163352.5	+	protein_coding	KNOWN	LENEP	2	2	1.150155
chr1	155002630	155018522	155010576	ENSG00000160685.13	+	protein_coding	KNOWN	ZBTB7B	7	5	1.238232
chr1	155018520	155033781	155026150	ENSG00000163354.14	-	protein_coding	KNOWN	DCST2	5	16	1.247297
chr1	155033824	155050930	155042377	ENSG00000163357.10	+	protein_coding	KNOWN	DCST1	5	17	1.044460
chr1	155045191	155046118	155045654	ENSG00000232093.1	-	antisense	KNOWN	RP11-307C12.11	1	2	1.043678
chr1	155050566	155062775	155056670	ENSG00000143537.13	+	protein_coding	KNOWN	ADAM15	32	23	1.058044
chr1	155063731	155069553	155066642	ENSG00000243364.7	+	protein_coding	KNOWN	EFNA4	3	4	1.058044
chr1	155063748	155086807	155075277	ENSG00000251246.1	+	protein_coding	KNOWN	RP11-540D14.8	1	5	1.133275
chr1	155078872	155087538	155083205	ENSG00000143590.13	+	protein_coding	KNOWN	EFNA3	3	5	1.161254
chr1	155120490	155120598	155120544	ENSG00000202027.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.595930
chr1	155127460	155134857	155131158	ENSG00000169242.11	+	protein_coding	KNOWN	EFNA1	5	5	0.815744
chr1	155135344	155138857	155137100	ENSG00000169241.17	+	protein_coding	KNOWN	SLC50A1	14	6	0.930629
chr1	155139891	155140595	155140243	ENSG00000179085.7	-	protein_coding	KNOWN	DPM3	3	2	0.930629
chr1	155148544	155148813	155148678	ENSG00000223452.3	+	processed_pseudogene	KNOWN	HMGN2P18	1	1	0.930629
chr1	155169408	155173475	155171441	ENSG00000163463.11	-	protein_coding	KNOWN	KRTCAP2	10	5	1.370879
chr1	155169409	155187272	155178340	ENSG00000273088.1	-	protein_coding	KNOWN	RP11-201K10.3	1	5	1.495383
chr1	155173787	155184971	155179379	ENSG00000163462.17	+	protein_coding	KNOWN	TRIM46	11	12	1.532006
chr1	155185824	155192916	155189370	ENSG00000185499.16	-	protein_coding	KNOWN	MUC1	29	11	1.508691
chr1	155188587	155189452	155189019	ENSG00000279986.1	+	protein_coding	KNOWN	AC234582.2	1	2	1.532006
chr1	155190050	155191339	155190694	ENSG00000279487.1	+	protein_coding	KNOWN	AC234582.1	1	2	1.475320
chr1	155195004	155205495	155200249	ENSG00000231064.5	+	antisense	KNOWN	RP11-263K19.4	6	6	1.475320
chr1	155195167	155195275	155195221	ENSG00000271748.2	+	miRNA	KNOWN	MIR92B	1	1	1.475320
chr1	155195588	155209051	155202319	ENSG00000169231.13	-	protein_coding	KNOWN	THBS3	11	23	1.475320
chr1	155208699	155213824	155211261	ENSG00000173171.14	+	protein_coding	KNOWN	MTX1	7	8	1.394426
chr1	155211151	155213819	155212485	ENSG00000236263.1	-	antisense	KNOWN	RP11-263K19.6	1	2	1.366933
chr1	155213821	155227422	155220621	ENSG00000160766.14	-	transcribed_unprocessed_pseudogene	KNOWN	GBAP1	8	12	1.366933
chr1	155230975	155234325	155232650	ENSG00000236675.1	+	unprocessed_pseudogene	KNOWN	MTX1P1	1	7	1.291601
chr1	155234452	155244699	155239575	ENSG00000177628.15	-	protein_coding	KNOWN	GBA	14	12	1.291601
chr1	155236749	155236837	155236793	ENSG00000216109.1	-	miRNA	NOVEL	AL713999.1	1	1	1.291601
chr1	155247205	155255483	155251344	ENSG00000160767.20	-	protein_coding	KNOWN	FAM189B	10	12	1.248904
chr1	155255979	155262430	155259204	ENSG00000116521.10	-	protein_coding	KNOWN	SCAMP3	9	9	1.227151
chr1	155262868	155278491	155270679	ENSG00000176444.18	-	protein_coding	KNOWN	CLK2	7	13	1.185511
chr1	155277583	155289848	155283715	ENSG00000143630.9	+	protein_coding	KNOWN	HCN3	4	8	1.150544
chr1	155289839	155301434	155295636	ENSG00000143627.17	-	protein_coding	KNOWN	PKLR	3	11	1.188841
chr1	155308748	155320666	155314707	ENSG00000160752.14	+	protein_coding	KNOWN	FDPS	21	11	0.955361
chr1	155316863	155324176	155320519	ENSG00000225855.6	-	antisense	KNOWN	RUSC1-AS1	4	6	0.927916
chr1	155320896	155331114	155326005	ENSG00000160753.15	+	protein_coding	KNOWN	RUSC1	16	10	0.962567
chr1	155335268	155562807	155449037	ENSG00000116539.10	-	protein_coding	KNOWN	ASH1L	7	28	0.608214
chr1	155346350	155346445	155346397	ENSG00000207720.1	-	miRNA	KNOWN	MIR555	1	1	1.245466
chr1	155358712	155358818	155358765	ENSG00000207134.1	-	snRNA	KNOWN	RNU6-106P	1	1	0.752682
chr1	155396010	155396978	155396494	ENSG00000227773.1	-	sense_intronic	KNOWN	ASH1L-IT1	1	2	0.420463
chr1	155419397	155419500	155419448	ENSG00000207144.1	+	snRNA	KNOWN	RNU6-1297P	1	1	0.592890
chr1	155433178	155434262	155433720	ENSG00000237872.4	+	processed_pseudogene	KNOWN	POU5F1P4	1	1	0.742246
chr1	155562042	155563944	155562993	ENSG00000235919.4	+	antisense	KNOWN	ASH1L-AS1	2	2	0.518051
chr1	155566050	155566306	155566178	ENSG00000271267.1	-	processed_pseudogene	KNOWN	RP11-29H23.7	1	1	0.518051
chr1	155586644	155602197	155594420	ENSG00000225082.2	+	unprocessed_pseudogene	KNOWN	DAP3P1	1	3	0.653109
chr1	155590601	155591262	155590931	ENSG00000223503.1	-	processed_pseudogene	KNOWN	RP11-29H23.6	1	1	0.673927
chr1	155609776	155610380	155610078	ENSG00000232519.2	-	antisense	KNOWN	RP11-29H23.4	1	2	0.848239
chr1	155610205	155614967	155612586	ENSG00000125459.14	+	protein_coding	KNOWN	MSTO1	18	14	0.950264
chr1	155614726	155660245	155637485	ENSG00000246203.2	-	unprocessed_pseudogene	KNOWN	RP11-29H23.5	1	9	0.686437
chr1	155659443	155689000	155674221	ENSG00000163374.19	-	protein_coding	KNOWN	YY1AP1	25	12	0.774912
chr1	155687960	155739010	155713485	ENSG00000132676.15	+	protein_coding	KNOWN	DAP3	26	13	0.674670
chr1	155710098	155710563	155710330	ENSG00000227673.1	-	antisense	KNOWN	RP11-243J18.2	1	2	0.668591
chr1	155745829	155750137	155747983	ENSG00000203761.5	+	unprocessed_pseudogene	KNOWN	MSTO2P	1	14	0.758537
chr1	155749662	155859400	155804531	ENSG00000116580.18	-	protein_coding	KNOWN	GON4L	19	32	0.816589
chr1	155845367	155846624	155845995	ENSG00000234937.1	+	processed_pseudogene	KNOWN	RP11-101O6.2	1	2	0.928891
chr1	155859509	155885199	155872354	ENSG00000132718.8	+	protein_coding	KNOWN	SYT11	1	4	0.826146
chr1	155897808	155911404	155904606	ENSG00000143622.10	-	protein_coding	KNOWN	RIT1	6	7	0.753395
chr1	155913043	155934400	155923721	ENSG00000132680.10	-	protein_coding	KNOWN	KIAA0907	10	14	0.981053
chr1	155919909	155920045	155919977	ENSG00000207475.1	-	snoRNA	KNOWN	SNORA80E	1	1	0.961408
chr1	155925958	155926086	155926022	ENSG00000281394.1	-	scaRNA	KNOWN	SCARNA4	1	1	0.961408
chr1	155925958	155926085	155926021	ENSG00000280466.1	-	scaRNA	KNOWN	SCARNA4	1	1	0.961408
chr1	155941710	155942949	155942329	ENSG00000173080.5	+	protein_coding	KNOWN	RXFP4	1	1	1.056741
chr1	155946851	156007070	155976960	ENSG00000116584.17	-	protein_coding	KNOWN	ARHGEF2	20	26	1.202424
chr1	155951273	155951336	155951304	ENSG00000277817.1	-	miRNA	KNOWN	MIR6738	1	1	1.044943
chr1	155978799	155982986	155980892	ENSG00000273002.1	+	antisense	KNOWN	RP11-336K24.12	1	2	1.457764
chr1	155991390	156001787	155996588	ENSG00000224276.1	+	antisense	KNOWN	RP11-336K24.5	1	2	1.114641
chr1	156009048	156020959	156015003	ENSG00000163479.13	-	protein_coding	KNOWN	SSR2	18	6	0.738236
chr1	156035301	156053794	156044547	ENSG00000160803.7	-	protein_coding	KNOWN	UBQLN4	3	11	1.101355
chr1	156054752	156058510	156056631	ENSG00000116586.11	+	protein_coding	KNOWN	LAMTOR2	6	4	1.211139
chr1	156061160	156070514	156065837	ENSG00000132698.13	+	protein_coding	KNOWN	RAB25	6	8	1.196161
chr1	156072013	156081998	156077005	ENSG00000254726.2	-	protein_coding	KNOWN	MEX3A	2	3	0.939093
chr1	156077373	156077454	156077413	ENSG00000222611.1	+	miRNA	NOVEL	AL355388.1	1	1	0.939093
chr1	156082573	156140089	156111331	ENSG00000160789.19	+	protein_coding	KNOWN	LMNA	25	13	1.054863
chr1	156147366	156177752	156162559	ENSG00000196189.12	+	protein_coding	KNOWN	SEMA4A	16	16	1.157661
chr1	156192063	156192203	156192133	ENSG00000252236.1	-	snoRNA	NOVEL	SNORA26	1	1	0.760010
chr1	156193932	156212796	156203364	ENSG00000160785.13	+	protein_coding	KNOWN	SLC25A44	5	4	0.759720
chr1	156212982	156243332	156228157	ENSG00000260238.6	+	protein_coding	KNOWN	PMF1-BGLAP	4	7	0.923452
chr1	156212993	156240042	156226517	ENSG00000160783.19	+	protein_coding	KNOWN	PMF1	6	7	0.897843
chr1	156241962	156243321	156242641	ENSG00000242252.1	+	protein_coding	KNOWN	BGLAP	2	4	1.134552
chr1	156243321	156248117	156245719	ENSG00000160781.15	-	protein_coding	KNOWN	PAQR6	15	9	1.134552
chr1	156249224	156282825	156266024	ENSG00000198952.8	-	protein_coding	KNOWN	SMG5	5	22	1.184309
chr1	156282935	156293185	156288060	ENSG00000163472.18	+	protein_coding	KNOWN	TMEM79	7	5	1.294865
chr1	156290089	156295689	156292889	ENSG00000198715.11	-	protein_coding	KNOWN	GLMP	15	6	1.091992
chr1	156298624	156299299	156298961	ENSG00000189030.9	-	protein_coding	KNOWN	VHLL	1	1	1.091992
chr1	156308968	156367873	156338420	ENSG00000163468.14	-	protein_coding	KNOWN	CCT3	16	15	0.857037
chr1	156337314	156346995	156342154	ENSG00000163467.11	+	protein_coding	KNOWN	TSACC	8	4	0.926933
chr1	156369212	156385219	156377215	ENSG00000132677.12	+	protein_coding	KNOWN	RHBG	9	11	0.921469
chr1	156388226	156395609	156391917	ENSG00000237390.1	+	lincRNA	KNOWN	RP11-139I14.2	1	2	0.937862
chr1	156404250	156430701	156417475	ENSG00000125462.16	-	protein_coding	KNOWN	C1orf61	27	7	0.891744
chr1	156420331	156420438	156420384	ENSG00000207933.2	+	miRNA	KNOWN	MIR9-1	1	1	0.879688
chr1	156446412	156456577	156451494	ENSG00000236947.5	-	lincRNA	KNOWN	RP11-98G7.1	2	4	0.863745
chr1	156463727	156500828	156482277	ENSG00000116604.17	-	protein_coding	KNOWN	MEF2D	7	12	0.969163
chr1	156484098	156484210	156484154	ENSG00000206651.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.890158
chr1	156509854	156511681	156510767	ENSG00000260460.1	+	lincRNA	KNOWN	RP11-284F21.8	1	1	0.845080
chr1	156525405	156572604	156549004	ENSG00000183856.10	-	protein_coding	KNOWN	IQGAP3	4	38	0.753548
chr1	156579727	156586770	156583248	ENSG00000187862.11	+	protein_coding	KNOWN	TTC24	6	11	0.864581
chr1	156587856	156587955	156587905	ENSG00000265960.1	-	miRNA	NOVEL	AL365181.1	1	1	0.864581
chr1	156591762	156594299	156593030	ENSG00000163382.11	+	protein_coding	KNOWN	APOA1BP	5	6	0.807262
chr1	156594487	156601496	156597991	ENSG00000160818.16	-	protein_coding	KNOWN	GPATCH4	16	9	0.807262
chr1	156597173	156599410	156598291	ENSG00000280316.1	+	protein_coding	KNOWN	AL365181.2	1	2	0.807262
chr1	156614742	156615288	156615015	ENSG00000272971.1	-	lincRNA	KNOWN	RP11-284F21.11	1	1	0.728793
chr1	156619294	156625725	156622509	ENSG00000132702.12	+	protein_coding	KNOWN	HAPLN2	5	7	0.728793
chr1	156637783	156641004	156639393	ENSG00000272068.1	-	lincRNA	KNOWN	RP11-284F21.9	1	1	0.825413
chr1	156641390	156659532	156650461	ENSG00000132692.18	+	protein_coding	KNOWN	BCAN	8	14	0.984313
chr1	156641666	156644887	156643276	ENSG00000272405.1	-	antisense	KNOWN	RP11-284F21.10	1	1	0.825413
chr1	156646507	156661424	156653965	ENSG00000229953.1	-	antisense	KNOWN	RP11-284F21.7	1	2	1.057022
chr1	156668763	156677397	156673080	ENSG00000132688.10	-	protein_coding	KNOWN	NES	1	4	0.904037
chr1	156687695	156691997	156689846	ENSG00000237588.2	-	lincRNA	KNOWN	RP11-66D17.3	1	2	0.909281
chr1	156699606	156705816	156702711	ENSG00000143320.8	-	protein_coding	KNOWN	CRABP2	4	5	0.958441
chr1	156712212	156713174	156712693	ENSG00000223356.1	-	antisense	KNOWN	RP11-66D17.5	1	2	1.011939
chr1	156721891	156728799	156725345	ENSG00000143319.16	-	protein_coding	KNOWN	ISG20L2	6	4	1.011939
chr1	156728442	156736960	156732701	ENSG00000143303.11	+	protein_coding	KNOWN	RRNAD1	11	8	0.965358
chr1	156737303	156741590	156739446	ENSG00000143314.12	-	protein_coding	KNOWN	MRPL24	6	6	0.954939
chr1	156742107	156766925	156754516	ENSG00000143321.18	-	protein_coding	KNOWN	HDGF	10	8	1.084311
chr1	156750610	156800817	156775713	ENSG00000143294.14	+	protein_coding	KNOWN	PRCC	7	7	0.905277
chr1	156806243	156816862	156811552	ENSG00000027869.11	-	protein_coding	KNOWN	SH2D2A	6	9	0.765667
chr1	156815640	156881850	156848745	ENSG00000198400.11	+	protein_coding	KNOWN	NTRK1	10	17	0.808283
chr1	156840063	156859018	156849540	ENSG00000027644.4	-	protein_coding	KNOWN	INSRR	1	22	0.706880
chr1	156893698	156916434	156905066	ENSG00000187800.13	+	protein_coding	KNOWN	PEAR1	7	24	1.010472
chr1	156920650	156933094	156926872	ENSG00000160838.13	+	protein_coding	KNOWN	LRRC71	4	16	0.814787
chr1	156934840	157045370	156990105	ENSG00000132694.18	-	protein_coding	KNOWN	ARHGEF11	7	41	0.473523
chr1	156936131	156936244	156936187	ENSG00000211581.1	-	miRNA	KNOWN	MIR765	1	1	0.781165
chr1	156985755	156986049	156985902	ENSG00000266160.2	-	misc_RNA	KNOWN	RN7SL612P	1	1	0.622507
chr1	157059232	157060762	157059997	ENSG00000237842.2	-	processed_pseudogene	KNOWN	RP11-110J1.2	1	1	0.300745
chr1	157073257	157074703	157073980	ENSG00000224520.2	+	processed_pseudogene	KNOWN	KRT8P45	1	1	0.033777
chr1	157092044	157099808	157095926	ENSG00000253831.1	-	protein_coding	KNOWN	ETV3L	1	5	0.368701
chr1	157121191	157138474	157129832	ENSG00000117036.11	-	protein_coding	KNOWN	ETV3	3	5	0.656131
chr1	157128362	157128671	157128516	ENSG00000235700.1	+	processed_pseudogene	KNOWN	CYCSP52	1	1	0.787881
chr1	157185388	157187405	157186396	ENSG00000229961.1	+	lincRNA	KNOWN	RP11-71G12.1	1	2	0.656344
chr1	157232231	157237136	157234683	ENSG00000228239.1	-	lincRNA	KNOWN	RP11-85G21.1	1	2	-0.222117
chr1	157280716	157283068	157281892	ENSG00000271736.1	+	lincRNA	KNOWN	RP11-85G21.3	1	2	-0.101733
chr1	157287703	157288053	157287878	ENSG00000237189.1	-	lincRNA	KNOWN	RP11-85G21.2	1	2	-0.101733
chr1	157513377	157552520	157532948	ENSG00000143297.18	-	protein_coding	KNOWN	FCRL5	8	17	-0.185274
chr1	157573749	157598080	157585914	ENSG00000163518.10	-	protein_coding	KNOWN	FCRL4	3	12	-0.232578
chr1	157629939	157630728	157630333	ENSG00000236731.1	-	unprocessed_pseudogene	KNOWN	RP4-801G22.2	1	2	-0.472021
chr1	157636300	157640301	157638300	ENSG00000233712.1	-	unprocessed_pseudogene	KNOWN	RP4-801G22.3	1	2	-0.474778
chr1	157674321	157700857	157687589	ENSG00000160856.20	-	protein_coding	KNOWN	FCRL3	12	16	-0.485422
chr1	157691762	157696459	157694110	ENSG00000227217.1	+	antisense	KNOWN	RP11-367J7.3	1	2	-0.275465
chr1	157709086	157709643	157709364	ENSG00000231700.3	+	processed_pseudogene	KNOWN	RP11-367J7.4	1	1	-0.275465
chr1	157724180	157725020	157724600	ENSG00000232366.1	-	processed_pseudogene	KNOWN	VDAC1P9	1	1	-0.463069
chr1	157745733	157777132	157761432	ENSG00000132704.15	-	protein_coding	KNOWN	FCRL2	5	12	-0.214968
chr1	157794403	157820105	157807254	ENSG00000163534.14	-	protein_coding	KNOWN	FCRL1	8	11	-0.310538
chr1	157830914	157898256	157864585	ENSG00000073754.5	-	protein_coding	KNOWN	CD5L	2	6	-0.213409
chr1	157861197	157861460	157861328	ENSG00000227425.1	+	processed_pseudogene	KNOWN	MRPS21P2	1	1	-0.032815
chr1	157925065	157949071	157937068	ENSG00000236957.7	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-451O13.1	3	4	-0.187685
chr1	157993273	158100262	158046767	ENSG00000183853.17	+	protein_coding	KNOWN	KIRREL	4	15	0.547983
chr1	158025550	158031166	158028358	ENSG00000226520.1	+	sense_intronic	KNOWN	KIRREL-IT1	1	2	0.307782
chr1	158132040	158146929	158139484	ENSG00000231666.6	-	lincRNA	KNOWN	RP11-404O13.1	3	4	0.053103
chr1	158175850	158177755	158176802	ENSG00000227295.2	-	processed_pseudogene	KNOWN	ELL2P1	1	1	-0.204990
chr1	158179947	158184896	158182421	ENSG00000158473.6	+	protein_coding	KNOWN	CD1D	1	7	-0.204990
chr1	158195633	158196131	158195882	ENSG00000229914.1	-	processed_pseudogene	KNOWN	RP11-404O13.4	1	1	-0.076937
chr1	158197922	158203877	158200899	ENSG00000176320.2	-	lincRNA	KNOWN	RP11-404O13.5	1	2	-0.076937
chr1	158254137	158258269	158256203	ENSG00000158477.6	+	protein_coding	KNOWN	CD1A	1	6	0.164142
chr1	158266753	158267320	158267036	ENSG00000230942.1	-	processed_pseudogene	KNOWN	HMGN1P5	1	2	0.164142
chr1	158289786	158293630	158291708	ENSG00000158481.12	+	protein_coding	KNOWN	CD1C	2	6	0.067933
chr1	158327951	158331531	158329741	ENSG00000158485.10	-	protein_coding	KNOWN	CD1B	2	6	-0.206877
chr1	158353696	158357553	158355624	ENSG00000158488.15	+	protein_coding	KNOWN	CD1E	15	6	-0.251661
chr1	158398522	158399466	158398994	ENSG00000186306.1	-	protein_coding	KNOWN	OR10T2	1	1	-0.806129
chr1	158419928	158420866	158420397	ENSG00000180708.4	-	protein_coding	KNOWN	OR10K2	1	1	-0.203015
chr1	158445068	158446014	158445541	ENSG00000203758.4	-	unprocessed_pseudogene	KNOWN	OR10T1P	1	1	-0.437628
chr1	158454198	158455273	158454735	ENSG00000236257.1	+	processed_pseudogene	KNOWN	EI24P2	1	1	-0.528816
chr1	158465562	158466503	158466032	ENSG00000173285.3	+	protein_coding	KNOWN	OR10K1	1	1	-0.528816
chr1	158474454	158494886	158484670	ENSG00000236656.1	-	antisense	KNOWN	RP11-144L1.4	2	3	-0.462594
chr1	158479878	158480885	158480381	ENSG00000198965.3	+	protein_coding	KNOWN	OR10R2	1	1	-0.376288
chr1	158491219	158492160	158491689	ENSG00000198703.2	+	unprocessed_pseudogene	KNOWN	OR10R3P	1	1	-0.737124
chr1	158514785	158515925	158515355	ENSG00000227445.1	+	unprocessed_pseudogene	KNOWN	OR10R1P	1	1	-0.397046
chr1	158523672	158525838	158524755	ENSG00000231434.1	+	processed_pseudogene	KNOWN	RP11-144L1.8	1	1	-0.397046
chr1	158547128	158548105	158547616	ENSG00000197532.1	-	protein_coding	KNOWN	OR6Y1	1	1	-0.570973
chr1	158562651	158563604	158563127	ENSG00000186440.1	-	protein_coding	KNOWN	OR6P1	1	1	-0.373672
chr1	158578919	158579899	158579409	ENSG00000186400.3	-	protein_coding	KNOWN	OR10X1	1	1	-0.388230
chr1	158578919	158579899	158579409	ENSG00000279111.1	-	polymorphic_pseudogene	KNOWN	OR10X1	2	1	-0.388230
chr1	158606439	158607380	158606909	ENSG00000198967.3	+	protein_coding	KNOWN	OR10Z1	1	1	-0.529497
chr1	158610706	158686698	158648702	ENSG00000163554.11	-	protein_coding	KNOWN	SPTA1	10	53	-0.415766
chr1	158694539	158695509	158695024	ENSG00000231237.1	-	unprocessed_pseudogene	KNOWN	OR6K1P	1	1	-0.570973
chr1	158699678	158700652	158700165	ENSG00000196171.3	-	protein_coding	KNOWN	OR6K2	1	1	-0.570973
chr1	158717168	158718163	158717665	ENSG00000203757.1	-	protein_coding	KNOWN	OR6K3	2	1	-0.625973
chr1	158724113	158725067	158724590	ENSG00000180437.5	-	unprocessed_pseudogene	KNOWN	OR6K4P	1	1	-0.625973
chr1	158742146	158743415	158742780	ENSG00000226949.1	-	unprocessed_pseudogene	KNOWN	OR6K5P	1	2	-0.437476
chr1	158754720	158755891	158755305	ENSG00000180433.4	+	protein_coding	KNOWN	OR6K6	1	1	-0.342029
chr1	158765744	158766682	158766213	ENSG00000197403.3	-	protein_coding	KNOWN	OR6N1	1	1	-0.342029
chr1	158776682	158777635	158777158	ENSG00000188340.1	-	protein_coding	KNOWN	OR6N2	1	1	-0.623169
chr1	158796014	158796213	158796113	ENSG00000229724.1	+	unprocessed_pseudogene	KNOWN	OR2AQ1P	1	1	-0.654975
chr1	158808399	158809335	158808867	ENSG00000180409.3	-	unprocessed_pseudogene	KNOWN	OR10AA1P	1	1	-0.654975
chr1	158831317	158849506	158840411	ENSG00000163563.7	+	protein_coding	KNOWN	MNDA	3	7	-0.497724
chr1	158878746	158883500	158881123	ENSG00000229849.1	+	unprocessed_pseudogene	KNOWN	PYHIN5P	1	4	-0.374431
chr1	158930796	158977054	158953925	ENSG00000163564.14	+	protein_coding	KNOWN	PYHIN1	7	9	-0.343131
chr1	158999968	159055155	159027561	ENSG00000163565.18	+	protein_coding	KNOWN	IFI16	14	12	0.001610
chr1	159059237	159059326	159059281	ENSG00000265589.2	+	miRNA	NOVEL	AL359753.1	1	1	0.075597
chr1	159062484	159147096	159104790	ENSG00000163568.13	-	protein_coding	KNOWN	AIM2	5	7	0.034143
chr1	159081133	159081795	159081464	ENSG00000233473.2	-	processed_pseudogene	KNOWN	RAD1P2	1	1	-0.256618
chr1	159171609	159203313	159187461	ENSG00000162706.12	+	protein_coding	KNOWN	CADM3	3	10	0.053728
chr1	159178473	159178559	159178516	ENSG00000222552.1	+	rRNA	KNOWN	RNA5SP60	1	1	-0.047733
chr1	159194325	159207973	159201149	ENSG00000225670.4	-	antisense	KNOWN	CADM3-AS1	2	4	0.193871
chr1	159203307	159206500	159204903	ENSG00000213088.9	+	protein_coding	KNOWN	ACKR1	4	3	0.193871
chr1	159276503	159277111	159276807	ENSG00000215846.6	+	processed_pseudogene	KNOWN	MPTX1	1	1	-0.053859
chr1	159279041	159280001	159279521	ENSG00000248642.1	-	unprocessed_pseudogene	KNOWN	OR10J2P	1	1	-0.053859
chr1	159289714	159308224	159298969	ENSG00000179639.10	+	protein_coding	KNOWN	FCER1A	2	6	-0.200787
chr1	159313670	159314659	159314164	ENSG00000196266.4	-	protein_coding	KNOWN	OR10J3	1	1	-0.138306
chr1	159346166	159469068	159407617	ENSG00000228560.1	-	antisense	KNOWN	RP11-550P17.5	1	4	-0.207965
chr1	159351093	159352026	159351559	ENSG00000248442.2	+	unitary_pseudogene	KNOWN	OR10J7P	1	1	-0.470322
chr1	159366161	159367089	159366625	ENSG00000251686.1	+	unprocessed_pseudogene	KNOWN	OR10J8P	1	1	-0.470322
chr1	159405423	159406409	159405916	ENSG00000249197.1	-	unprocessed_pseudogene	KNOWN	OR10J9P	1	1	-0.090872
chr1	159432204	159433138	159432671	ENSG00000249730.1	+	polymorphic_pseudogene	KNOWN	OR10J4	1	1	0.256528
chr1	159439722	159440811	159440266	ENSG00000196184.8	+	protein_coding	KNOWN	OR10J1	1	1	0.256528
chr1	159466321	159483376	159474848	ENSG00000224943.1	+	lincRNA	KNOWN	RP11-180D21.3	1	3	-0.219200
chr1	159535078	159536007	159535542	ENSG00000184155.8	-	protein_coding	KNOWN	OR10J5	1	1	-0.169500
chr1	159557368	159558200	159557784	ENSG00000231100.1	+	unprocessed_pseudogene	KNOWN	RP11-740C1.2	1	2	0.035776
chr1	159581620	159582648	159582134	ENSG00000271890.1	-	unprocessed_pseudogene	KNOWN	OR10AE1P	1	1	-0.019040
chr1	159587825	159588865	159588345	ENSG00000132703.3	+	protein_coding	KNOWN	APCS	1	2	-0.019040
chr1	159598298	159599227	159598762	ENSG00000158731.2	+	unprocessed_pseudogene	KNOWN	OR10J6P	1	1	-0.141207
chr1	159649151	159649620	159649385	ENSG00000276632.1	+	processed_pseudogene	KNOWN	RP11-419N10.6	1	1	-0.145047
chr1	159704983	159705607	159705295	ENSG00000223603.1	-	unprocessed_pseudogene	KNOWN	CRPP1	1	1	0.109694
chr1	159712289	159714589	159713439	ENSG00000132693.12	-	protein_coding	KNOWN	CRP	7	4	0.160523
chr1	159759170	159759589	159759379	ENSG00000235226.1	+	processed_pseudogene	KNOWN	RP11-419N10.5	1	1	-0.118368
chr1	159780932	159782543	159781737	ENSG00000158716.8	+	protein_coding	KNOWN	DUSP23	3	3	0.140201
chr1	159800511	159816251	159808381	ENSG00000181036.13	+	protein_coding	KNOWN	FCRL6	7	11	0.355273
chr1	159826750	159837249	159831999	ENSG00000158714.10	+	protein_coding	KNOWN	SLAMF8	4	5	0.577161
chr1	159834474	159855347	159844910	ENSG00000188004.9	-	protein_coding	KNOWN	C1orf204	3	6	0.646685
chr1	159851906	159851972	159851939	ENSG00000212161.1	-	snoRNA	NOVEL	SNORD64	1	1	0.654928
chr1	159854316	159862657	159858486	ENSG00000243284.1	-	protein_coding	KNOWN	VSIG8	1	7	0.654928
chr1	159857900	159873053	159865476	ENSG00000256029.5	-	protein_coding	KNOWN	RP11-190A12.7	5	4	0.629559
chr1	159866954	159867685	159867319	ENSG00000272668.1	+	antisense	KNOWN	RP11-190A12.8	1	1	0.654928
chr1	159872364	159900163	159886263	ENSG00000213085.9	-	protein_coding	KNOWN	CFAP45	6	12	0.423785
chr1	159899979	159900079	159900029	ENSG00000266458.1	-	miRNA	KNOWN	MIR4259	1	1	0.241135
chr1	159910094	159910554	159910324	ENSG00000279430.1	-	TEC	KNOWN	RP11-190A12.9	1	1	0.612824
chr1	159918107	159925732	159921919	ENSG00000158710.14	-	protein_coding	KNOWN	TAGLN2	5	5	0.612824
chr1	159927039	159945604	159936321	ENSG00000085552.16	-	protein_coding	KNOWN	IGSF9	6	21	0.728726
chr1	159951492	159954254	159952873	ENSG00000162723.9	-	protein_coding	KNOWN	SLAMF9	4	4	0.634519
chr1	159961218	159984750	159972984	ENSG00000224259.6	+	lincRNA	KNOWN	LINC01133	3	4	0.559726
chr1	159972548	159974064	159973306	ENSG00000273933.1	-	unprocessed_pseudogene	KNOWN	RP11-48O20.5	1	3	0.515203
chr1	160020300	160020727	160020513	ENSG00000237409.2	+	processed_pseudogene	KNOWN	RP11-226L15.1	1	1	0.495785
chr1	160024953	160026794	160025873	ENSG00000260766.1	-	sense_overlapping	KNOWN	RP11-226L15.5	1	1	0.495785
chr1	160027673	160031991	160029832	ENSG00000143315.6	-	protein_coding	KNOWN	PIGM	1	1	0.302679
chr1	160037467	160070248	160053857	ENSG00000177807.6	-	protein_coding	KNOWN	KCNJ10	2	2	0.376287
chr1	160062488	160079821	160071154	ENSG00000225279.1	+	antisense	KNOWN	RP11-536C5.2	1	5	0.649863
chr1	160081570	160090563	160086066	ENSG00000162728.4	+	protein_coding	KNOWN	KCNJ9	1	3	0.716224
chr1	160091340	160098943	160095141	ENSG00000162729.13	-	protein_coding	KNOWN	IGSF8	5	8	0.674460
chr1	160115759	160143591	160129675	ENSG00000018625.14	+	protein_coding	KNOWN	ATP1A2	8	23	0.710644
chr1	160151570	160186977	160169273	ENSG00000132681.16	+	protein_coding	KNOWN	ATP1A4	6	22	0.685161
chr1	160190556	160201886	160196221	ENSG00000143318.12	+	protein_coding	KNOWN	CASQ1	3	11	0.848566
chr1	160202199	160208869	160205534	ENSG00000227741.1	-	antisense	KNOWN	RP11-536C5.7	1	5	0.848566
chr1	160205337	160215376	160210356	ENSG00000162734.12	+	protein_coding	KNOWN	PEA15	4	6	1.011834
chr1	160205377	160205464	160205420	ENSG00000265381.1	+	miRNA	NOVEL	AL121987.1	1	1	0.848566
chr1	160215715	160262531	160239123	ENSG00000132716.18	-	protein_coding	KNOWN	DCAF8	18	14	0.683731
chr1	160217464	160285130	160251297	ENSG00000258465.6	-	protein_coding	KNOWN	RP11-574F21.3	2	18	0.613237
chr1	160261744	160262778	160262261	ENSG00000228606.1	+	antisense	KNOWN	RP11-574F21.2	1	2	0.281594
chr1	160266340	160267225	160266782	ENSG00000224261.2	-	processed_pseudogene	KNOWN	RPSAP18	1	1	0.281594
chr1	160276812	160286348	160281580	ENSG00000162735.18	-	protein_coding	KNOWN	PEX19	12	9	0.621245
chr1	160289273	160343400	160316336	ENSG00000122218.14	-	protein_coding	KNOWN	COPA	7	33	0.397336
chr1	160317403	160317706	160317554	ENSG00000235082.2	+	processed_pseudogene	KNOWN	SUMO1P3	1	1	0.369727
chr1	160326104	160326216	160326160	ENSG00000202078.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.369727
chr1	160343272	160358952	160351112	ENSG00000162736.15	+	protein_coding	KNOWN	NCSTN	14	18	0.253107
chr1	160367067	160372848	160369957	ENSG00000171786.5	+	protein_coding	KNOWN	NHLH1	1	2	0.379690
chr1	160392768	160392909	160392838	ENSG00000201608.1	-	snRNA	KNOWN	RNU4-42P	1	1	0.372620
chr1	160400586	160428678	160414632	ENSG00000162738.5	+	protein_coding	KNOWN	VANGL2	2	8	0.529389
chr1	160485030	160523262	160504146	ENSG00000162739.13	-	protein_coding	KNOWN	SLAMF6	3	8	-0.267283
chr1	160537073	160571458	160554265	ENSG00000234425.1	+	antisense	KNOWN	RP11-528G1.2	1	2	-0.097229
chr1	160541095	160579516	160560305	ENSG00000066294.14	-	protein_coding	KNOWN	CD84	8	8	-0.084619
chr1	160608100	160647295	160627697	ENSG00000117090.14	-	protein_coding	KNOWN	SLAMF1	4	8	0.083968
chr1	160670148	160670979	160670563	ENSG00000235101.1	+	transcribed_processed_pseudogene	KNOWN	SETP9	1	1	0.027141
chr1	160670778	160699761	160685269	ENSG00000228863.8	+	antisense	KNOWN	RP11-404F10.2	10	6	-0.090076
chr1	160678746	160711851	160695298	ENSG00000117091.9	-	protein_coding	KNOWN	CD48	3	4	-0.200905
chr1	160739057	160754821	160746939	ENSG00000026751.16	+	protein_coding	KNOWN	SLAMF7	11	7	0.036723
chr1	160775954	160776608	160776281	ENSG00000275801.1	-	unprocessed_pseudogene	KNOWN	RP11-404F10.6	1	2	0.062845
chr1	160776975	160780140	160778557	ENSG00000274562.1	-	unprocessed_pseudogene	KNOWN	RP11-404F10.5	1	2	0.062845
chr1	160796074	160828261	160812167	ENSG00000122224.17	+	protein_coding	KNOWN	LY9	11	10	0.022410
chr1	160830160	160862855	160846507	ENSG00000122223.12	-	protein_coding	KNOWN	CD244	5	9	-0.101862
chr1	160848010	160848502	160848256	ENSG00000226003.2	+	processed_pseudogene	KNOWN	RP11-312J18.3	1	1	-0.122665
chr1	160876539	160885170	160880854	ENSG00000179914.4	-	protein_coding	KNOWN	ITLN1	3	8	0.255182
chr1	160894980	160896076	160895528	ENSG00000213080.3	+	processed_pseudogene	KNOWN	RP11-312J18.5	1	1	-0.057234
chr1	160931739	160934380	160933059	ENSG00000232188.1	-	lincRNA	KNOWN	RP11-312J18.6	1	2	-0.187081
chr1	160932465	160949922	160941193	ENSG00000198358.4	+	antisense	KNOWN	RP11-544M22.1	1	6	-0.187081
chr1	160935537	160936126	160935831	ENSG00000233691.2	+	processed_pseudogene	KNOWN	RP11-312J18.7	1	1	-0.187081
chr1	160945025	160954799	160949912	ENSG00000158764.6	-	protein_coding	KNOWN	ITLN2	3	8	0.135231
chr1	160995211	161021348	161008279	ENSG00000158769.17	-	protein_coding	KNOWN	F11R	6	11	0.235958
chr1	160997957	161038962	161018459	ENSG00000270149.5	-	protein_coding	KNOWN	RP11-544M22.13	2	13	0.237231
chr1	161034834	161035006	161034920	ENSG00000232879.2	+	processed_pseudogene	KNOWN	RP11-544M22.3	1	1	0.370293
chr1	161037631	161038990	161038310	ENSG00000215845.10	-	protein_coding	KNOWN	TSTD1	7	4	0.370293
chr1	161039251	161045977	161042614	ENSG00000158773.14	-	protein_coding	KNOWN	USF1	11	11	0.370293
chr1	161046946	161069970	161058458	ENSG00000186517.13	-	protein_coding	KNOWN	ARHGAP30	7	13	0.773036
chr1	161065865	161066153	161066009	ENSG00000278883.1	+	protein_coding	KNOWN	AL591806.1	1	2	0.834604
chr1	161070995	161089599	161080297	ENSG00000143217.8	-	protein_coding	KNOWN	PVRL4	2	9	0.682807
chr1	161084465	161087571	161086018	ENSG00000228917.1	+	antisense	KNOWN	RP11-544M22.8	1	3	0.682807
chr1	161098361	161100346	161099353	ENSG00000162755.13	+	protein_coding	KNOWN	KLHDC9	8	5	0.540398
chr1	161100556	161118111	161109333	ENSG00000143256.4	-	protein_coding	KNOWN	PFDN2	2	4	0.477544
chr1	161118086	161125445	161121765	ENSG00000158793.13	+	protein_coding	KNOWN	NIT1	16	7	0.404376
chr1	161120974	161132688	161126831	ENSG00000158796.16	-	protein_coding	KNOWN	DEDD	12	8	0.487161
chr1	161141208	161141336	161141272	ENSG00000238934.1	-	snoRNA	NOVEL	ACA64	1	1	0.765010
chr1	161152776	161158856	161155816	ENSG00000143222.11	+	protein_coding	KNOWN	UFC1	6	7	0.550656
chr1	161153760	161159349	161156554	ENSG00000224985.1	-	antisense	KNOWN	RP11-297K8.2	1	2	0.550656
chr1	161159450	161165723	161162586	ENSG00000143258.15	+	protein_coding	KNOWN	USP21	10	14	0.550656
chr1	161166410	161178013	161172211	ENSG00000143224.17	+	protein_coding	KNOWN	PPOX	19	13	0.771888
chr1	161171310	161177968	161174639	ENSG00000158850.14	-	protein_coding	KNOWN	B4GALT3	13	8	0.870965
chr1	161184308	161199056	161191682	ENSG00000158859.9	-	protein_coding	KNOWN	ADAMTS4	3	9	0.710005
chr1	161197104	161214395	161205749	ENSG00000158864.12	+	protein_coding	KNOWN	NDUFS2	15	15	0.647427
chr1	161215234	161220699	161217966	ENSG00000158869.10	+	protein_coding	KNOWN	FCER1G	3	5	0.760541
chr1	161222292	161223631	161222961	ENSG00000158874.11	-	protein_coding	KNOWN	APOA2	10	5	0.760541
chr1	161225939	161230744	161228341	ENSG00000158882.12	+	protein_coding	KNOWN	TOMM40L	9	10	0.766472
chr1	161227186	161227261	161227223	ENSG00000263548.1	+	miRNA	KNOWN	MIR5187	1	1	0.760541
chr1	161229666	161238302	161233984	ENSG00000143257.11	-	protein_coding	KNOWN	NR1I3	35	9	0.797320
chr1	161258727	161285450	161272088	ENSG00000248485.1	+	protein_coding	KNOWN	PCP4L1	1	3	0.403668
chr1	161304735	161309972	161307353	ENSG00000158887.15	-	protein_coding	KNOWN	MPZ	6	7	0.194242
chr1	161314257	161375340	161344798	ENSG00000143252.14	+	protein_coding	KNOWN	SDHC	9	7	0.197376
chr1	161364731	161367874	161366302	ENSG00000188931.3	-	protein_coding	KNOWN	CFAP126	1	5	0.134015
chr1	161378707	161379358	161379032	ENSG00000236484.2	-	processed_pseudogene	KNOWN	RRM2P2	1	1	0.440555
chr1	161401289	161401395	161401342	ENSG00000206921.1	+	snRNA	KNOWN	RNU6-481P	1	1	0.570964
chr1	161406068	161407082	161406575	ENSG00000215840.3	+	processed_pseudogene	KNOWN	RP11-122G18.7	1	2	0.570964
chr1	161411597	161411802	161411699	ENSG00000277882.1	-	processed_pseudogene	KNOWN	RP11-122G18.9	1	1	0.378463
chr1	161505430	161524013	161514721	ENSG00000143226.13	+	protein_coding	KNOWN	FCGR2A	14	7	0.135677
chr1	161513176	161605099	161559137	ENSG00000273112.1	+	processed_transcript	KNOWN	RP11-25K21.6	1	5	0.107859
chr1	161524540	161526910	161525725	ENSG00000173110.7	+	protein_coding	KNOWN	HSPA6	1	1	0.142916
chr1	161536571	161538158	161537364	ENSG00000224203.2	-	unprocessed_pseudogene	KNOWN	RPS23P10	1	3	0.253743
chr1	161541759	161550737	161546248	ENSG00000203747.9	-	protein_coding	KNOWN	FCGR3A	7	6	0.256283
chr1	161556290	161557078	161556684	ENSG00000224515.1	-	antisense	KNOWN	RP11-5K23.5	1	2	0.284637
chr1	161581339	161605662	161593500	ENSG00000244682.7	+	polymorphic_pseudogene	KNOWN	FCGR2C	12	8	0.020468
chr1	161606291	161608217	161607254	ENSG00000225217.1	+	unprocessed_pseudogene	KNOWN	HSPA7	1	1	0.209124
chr1	161617992	161619585	161618788	ENSG00000231586.2	-	unprocessed_pseudogene	KNOWN	RPS23P9	1	3	0.322997
chr1	161623196	161631963	161627579	ENSG00000162747.9	-	protein_coding	KNOWN	FCGR3B	9	6	0.349880
chr1	161663147	161678654	161670900	ENSG00000072694.19	+	protein_coding	KNOWN	FCGR2B	6	9	0.123976
chr1	161671978	161674824	161673401	ENSG00000234211.2	-	antisense	KNOWN	RP11-25K21.1	2	3	0.255491
chr1	161683695	161685252	161684473	ENSG00000213075.7	-	transcribed_processed_pseudogene	KNOWN	RPL31P11	2	1	0.255491
chr1	161699506	161699607	161699556	ENSG00000199595.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.023973
chr1	161706972	161714352	161710662	ENSG00000132185.16	+	protein_coding	KNOWN	FCRLA	14	6	0.182544
chr1	161721563	161728143	161724853	ENSG00000162746.14	+	protein_coding	KNOWN	FCRLB	6	8	0.292811
chr1	161735808	161736102	161735955	ENSG00000241347.3	+	misc_RNA	KNOWN	RN7SL466P	1	1	0.275058
chr1	161749758	161757238	161753498	ENSG00000081721.11	+	protein_coding	KNOWN	DUSP12	5	6	0.144695
chr1	161765325	161766227	161765776	ENSG00000226889.3	-	antisense	KNOWN	RP11-474I16.8	1	2	0.140355
chr1	161766294	161964070	161865182	ENSG00000118217.5	+	protein_coding	KNOWN	ATF6	2	16	-0.115485
chr1	161890833	161892196	161891514	ENSG00000229808.1	+	transcribed_processed_pseudogene	KNOWN	RP11-456P18.2	2	1	-0.258289
chr1	161983192	162023854	162003523	ENSG00000162745.10	-	protein_coding	KNOWN	OLFML2B	5	8	0.384678
chr1	162039016	162039567	162039291	ENSG00000227818.1	+	lincRNA	KNOWN	RP11-227F8.2	1	2	0.419033
chr1	162069774	162370475	162220124	ENSG00000198929.12	+	protein_coding	KNOWN	NOS1AP	6	11	-0.023329
chr1	162157107	162157182	162157144	ENSG00000266144.1	+	miRNA	KNOWN	MIR4654	1	1	-0.115009
chr1	162316852	162317794	162317323	ENSG00000227094.1	-	antisense	KNOWN	RP11-565P22.2	1	2	-0.031240
chr1	162338643	162338742	162338692	ENSG00000252262.1	+	rRNA	KNOWN	RNA5SP61	1	1	0.145431
chr1	162342530	162342638	162342584	ENSG00000207729.2	+	miRNA	KNOWN	MIR556	1	1	0.145431
chr1	162365407	162383531	162374469	ENSG00000254706.2	+	protein_coding	KNOWN	RP11-565P22.6	2	3	0.086999
chr1	162366908	162386818	162376863	ENSG00000239887.4	+	protein_coding	KNOWN	C1orf226	3	4	0.096820
chr1	162373203	162376870	162375036	ENSG00000171722.11	-	protein_coding	KNOWN	C1orf111	3	4	0.112360
chr1	162395266	162412138	162403702	ENSG00000198574.5	-	protein_coding	KNOWN	SH2D1B	2	4	0.268218
chr1	162445549	162446566	162446057	ENSG00000227243.3	+	unprocessed_pseudogene	KNOWN	SLAMF6P1	1	2	-0.273802
chr1	162497251	162529629	162513440	ENSG00000152332.15	+	protein_coding	KNOWN	UHMK1	4	8	-0.030977
chr1	162541332	162541628	162541480	ENSG00000227941.1	-	processed_pseudogene	KNOWN	UQCRBP2	1	1	-0.029753
chr1	162560227	162561308	162560767	ENSG00000259788.1	-	antisense	KNOWN	RP11-359K18.3	1	1	0.123701
chr1	162561506	162599842	162580674	ENSG00000117143.13	+	protein_coding	KNOWN	UAP1	7	11	0.156656
chr1	162593103	162593754	162593428	ENSG00000272574.1	+	sense_intronic	KNOWN	RP11-359K18.4	1	2	0.023097
chr1	162631373	162787400	162709386	ENSG00000162733.16	+	protein_coding	KNOWN	DDR2	6	19	0.182029
chr1	162777730	162778014	162777872	ENSG00000243173.3	+	misc_RNA	KNOWN	RN7SL861P	1	1	0.061618
chr1	162790702	162812817	162801759	ENSG00000132196.13	+	protein_coding	KNOWN	HSD17B7	10	9	-0.123660
chr1	162824458	162868815	162846636	ENSG00000185860.13	-	protein_coding	KNOWN	CCDC190	5	5	-0.248225
chr1	162824795	162849467	162837131	ENSG00000230739.1	+	unprocessed_pseudogene	KNOWN	RP11-331H2.4	1	7	-0.301899
chr1	162979551	162979793	162979672	ENSG00000227667.1	-	processed_pseudogene	KNOWN	RP11-331H2.3	1	1	0.182965
chr1	163068775	163076802	163072788	ENSG00000117152.13	+	protein_coding	KNOWN	RGS4	10	6	-0.070749
chr1	163111121	163321791	163216456	ENSG00000143248.12	-	protein_coding	KNOWN	RGS5	12	6	-0.234574
chr1	163161675	163213023	163187349	ENSG00000232892.1	+	antisense	KNOWN	RP11-267N12.1	1	4	-0.127436
chr1	163237214	163239197	163238205	ENSG00000225755.2	+	processed_pseudogene	KNOWN	RP11-267N12.2	1	4	-0.387176
chr1	163244505	163321894	163283199	ENSG00000232995.7	-	antisense	KNOWN	RGS5	9	6	-0.173324
chr1	163259850	163260659	163260254	ENSG00000237756.1	+	lincRNA	KNOWN	RP11-77M5.1	1	2	0.040645
chr1	163266576	163355764	163311170	ENSG00000143228.12	+	protein_coding	KNOWN	NUF2	12	14	-0.280223
chr1	163422405	163423164	163422784	ENSG00000225122.1	-	unprocessed_pseudogene	KNOWN	RP11-408E1.1	1	2	-0.364724
chr1	163468496	163468605	163468550	ENSG00000200327.1	-	rRNA	KNOWN	RNA5SP62	1	1	-0.634443
chr1	163509484	163509595	163509539	ENSG00000212527.1	+	rRNA	KNOWN	RNA5SP63	1	1	-0.365215
chr1	163769339	163769691	163769515	ENSG00000228289.1	-	processed_pseudogene	KNOWN	RP4-640E24.1	1	1	-0.115700
chr1	163923670	163923873	163923771	ENSG00000212538.2	+	snoRNA	NOVEL	U3	1	1	-0.697923
chr1	164343005	164343864	164343434	ENSG00000225719.2	+	processed_pseudogene	KNOWN	NMNAT1P2	1	1	-0.576802
chr1	164351273	164351388	164351330	ENSG00000199849.1	+	snRNA	KNOWN	RNU5F-6P	1	1	-0.483693
chr1	164356767	164357364	164357065	ENSG00000213070.3	+	processed_pseudogene	KNOWN	HMGB3P6	1	1	-0.483693
chr1	164555584	164899296	164727440	ENSG00000185630.18	+	protein_coding	KNOWN	PBX1	22	9	0.017927
chr1	164589480	164589615	164589547	ENSG00000274155.2	+	miRNA	NOVEL	AL391001.1	1	1	0.275299
chr1	164639565	164639671	164639618	ENSG00000207082.1	+	snRNA	KNOWN	RNU6-171P	1	1	0.148260
chr1	164675324	164675424	164675374	ENSG00000277116.1	+	miRNA	NOVEL	AL391001.2	1	1	-0.085546
chr1	164680085	164680799	164680442	ENSG00000269887.1	+	sense_intronic	KNOWN	RP11-477H21.2	1	1	-0.085546
chr1	164703026	164703309	164703167	ENSG00000276359.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.072128
chr1	164769116	164774641	164771878	ENSG00000233693.1	-	antisense	KNOWN	RP11-506O24.1	1	4	0.315800
chr1	164828436	164829952	164829194	ENSG00000271917.1	+	sense_intronic	KNOWN	RP11-506O24.2	1	1	-0.344525
chr1	164854231	164854332	164854281	ENSG00000201987.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.015537
chr1	164921318	164921629	164921473	ENSG00000225487.2	-	processed_pseudogene	KNOWN	RP11-403P14.1	1	1	-0.330540
chr1	164980035	164980137	164980086	ENSG00000201270.1	-	snRNA	KNOWN	RNU6-755P	1	1	-0.152315
chr1	164983902	164983992	164983947	ENSG00000212086.1	-	miRNA	NOVEL	AL390119.1	1	1	-0.152315
chr1	165201867	165356715	165279291	ENSG00000162761.14	-	protein_coding	KNOWN	LMX1A	4	9	-0.196699
chr1	165210627	165213090	165211858	ENSG00000224702.1	+	antisense	KNOWN	RP11-38C18.2	1	3	-0.221166
chr1	165215980	165219104	165217542	ENSG00000238022.1	+	antisense	KNOWN	RP11-38C18.3	2	2	-0.221166
chr1	165400917	165445355	165423136	ENSG00000143171.12	-	protein_coding	KNOWN	RXRG	4	11	-0.311493
chr1	165476841	165582155	165529498	ENSG00000237463.5	-	antisense	KNOWN	RP11-280O1.2	7	8	-0.217442
chr1	165497724	165498348	165498036	ENSG00000230748.1	+	processed_pseudogene	KNOWN	RP11-541H12.1	1	1	-0.113233
chr1	165544007	165563961	165553984	ENSG00000162763.3	+	protein_coding	KNOWN	LRRC52	1	2	-0.179807
chr1	165581613	165582476	165582044	ENSG00000237783.2	+	processed_pseudogene	KNOWN	RP11-306I1.1	1	1	-0.139334
chr1	165598463	165623331	165610897	ENSG00000236206.1	+	lincRNA	KNOWN	RP11-306I1.2	1	4	-0.235599
chr1	165630861	165661796	165646328	ENSG00000143198.12	+	protein_coding	KNOWN	MGST3	14	7	0.151002
chr1	165662216	165698863	165680539	ENSG00000143149.12	-	protein_coding	KNOWN	ALDH9A1	5	11	0.106121
chr1	165662585	165662687	165662636	ENSG00000206990.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.199774
chr1	165671256	165671725	165671490	ENSG00000230175.1	+	processed_pseudogene	KNOWN	RP11-466F5.3	1	1	0.223987
chr1	165676310	165676781	165676545	ENSG00000225272.2	+	processed_pseudogene	KNOWN	RP11-466F5.4	1	1	0.223987
chr1	165698750	165709968	165704359	ENSG00000215838.4	+	transcribed_processed_pseudogene	KNOWN	RP11-466F5.6	2	4	0.108768
chr1	165706556	165707284	165706920	ENSG00000273365.1	-	lincRNA	KNOWN	RP11-466F5.10	1	1	0.108768
chr1	165724293	165827755	165776024	ENSG00000143183.16	-	protein_coding	KNOWN	TMCO1	9	9	0.017181
chr1	165768929	165775176	165772052	ENSG00000224358.1	+	antisense	KNOWN	RP11-466F5.8	1	2	0.209178
chr1	165819353	165819787	165819570	ENSG00000230659.3	+	processed_pseudogene	KNOWN	RP11-466F5.9	1	1	0.240694
chr1	165827531	165911618	165869574	ENSG00000143179.12	+	protein_coding	KNOWN	UCK2	8	7	0.212425
chr1	165890795	165900683	165895739	ENSG00000236364.3	-	antisense	KNOWN	RP11-525G13.2	2	3	0.296488
chr1	165941235	165941769	165941502	ENSG00000271527.1	-	processed_pseudogene	KNOWN	RP11-7G12.2	1	1	-0.355467
chr1	166022215	166023027	166022621	ENSG00000226292.1	+	processed_pseudogene	KNOWN	RP11-7G12.1	1	1	-0.339561
chr1	166042244	166042350	166042297	ENSG00000207341.1	+	rRNA	KNOWN	RNA5SP64	1	1	-0.084886
chr1	166057426	166166969	166112197	ENSG00000188859.6	-	protein_coding	KNOWN	FAM78B	5	3	-0.102294
chr1	166081183	166087483	166084333	ENSG00000203307.2	+	antisense	KNOWN	RP11-375H19.2	1	3	-0.007544
chr1	166147782	166165095	166156438	ENSG00000230898.1	-	sense_intronic	KNOWN	RP11-9L18.3	1	2	-0.201471
chr1	166154743	166154798	166154770	ENSG00000215952.1	-	miRNA	KNOWN	MIR921	1	1	-0.222519
chr1	166275629	166277597	166276613	ENSG00000215835.2	-	processed_pseudogene	KNOWN	RP11-9L18.2	1	1	-0.040004
chr1	166334884	166335762	166335323	ENSG00000229588.1	+	lincRNA	KNOWN	RP11-479J7.2	1	3	-0.481383
chr1	166387727	166452632	166420179	ENSG00000225325.1	-	lincRNA	KNOWN	RP11-479J7.1	1	3	-0.321033
chr1	166474745	166481565	166478155	ENSG00000230231.1	+	unprocessed_pseudogene	KNOWN	FMO7P	1	4	-0.594254
chr1	166475772	166490039	166482905	ENSG00000234142.1	-	lincRNA	KNOWN	RP11-276E17.2	1	3	-0.592423
chr1	166566178	166580705	166573441	ENSG00000238087.3	+	unprocessed_pseudogene	KNOWN	FMO8P	1	8	-0.409231
chr1	166603675	166631400	166617537	ENSG00000215834.8	+	unitary_pseudogene	KNOWN	FMO9P	2	8	-0.430441
chr1	166665885	166682196	166674040	ENSG00000234984.1	+	unitary_pseudogene	KNOWN	FMO10P	1	8	-0.260673
chr1	166747379	166748660	166748019	ENSG00000232341.2	+	processed_pseudogene	KNOWN	RPL4P2	1	1	-0.409757
chr1	166763334	166792767	166778050	ENSG00000232148.1	+	unitary_pseudogene	KNOWN	FMO11P	1	10	-0.483335
chr1	166796266	166797183	166796724	ENSG00000232223.1	+	processed_pseudogene	KNOWN	CNN2P10	1	1	-0.163265
chr1	166839447	166856344	166847895	ENSG00000143157.11	+	protein_coding	KNOWN	POGK	3	6	0.038096
chr1	166856510	166876327	166866418	ENSG00000152382.5	-	protein_coding	KNOWN	TADA1	2	8	0.170008
chr1	166868748	166869209	166868978	ENSG00000225171.2	+	processed_pseudogene	KNOWN	DUTP6	1	1	0.187961
chr1	166895711	166975482	166935596	ENSG00000143195.12	-	protein_coding	KNOWN	ILDR2	9	10	-0.188563
chr1	166975582	167022214	166998898	ENSG00000143194.12	+	protein_coding	KNOWN	MAEL	6	13	-0.263634
chr1	167005959	167006077	167006018	ENSG00000200036.1	+	rRNA	KNOWN	RNA5SP65	1	1	-0.349198
chr1	167052551	167058542	167055546	ENSG00000227907.1	+	antisense	KNOWN	RP11-102C16.3	1	2	0.035408
chr1	167052836	167166479	167109657	ENSG00000143167.11	-	protein_coding	KNOWN	GPA33	4	7	-0.080656
chr1	167094045	167129165	167111605	ENSG00000198842.9	+	protein_coding	KNOWN	DUSP27	4	6	-0.138986
chr1	167162423	167162837	167162630	ENSG00000213068.3	-	processed_pseudogene	KNOWN	RP11-277B15.1	1	1	-0.172655
chr1	167175917	167195792	167185854	ENSG00000231605.5	-	antisense	KNOWN	LINC01363	4	5	-0.100401
chr1	167219831	167220512	167220171	ENSG00000272205.1	-	lincRNA	KNOWN	RP11-277B15.3	1	1	-0.022080
chr1	167220829	167427345	167324087	ENSG00000143190.21	+	protein_coding	KNOWN	POU2F1	16	18	-0.346221
chr1	167379108	167381000	167380054	ENSG00000272033.1	+	sense_intronic	KNOWN	RP11-52A20.2	1	1	-0.539857
chr1	167430640	167518610	167474625	ENSG00000198821.10	-	protein_coding	KNOWN	CD247	7	8	-0.036799
chr1	167457383	167458661	167458022	ENSG00000233411.1	-	sense_intronic	KNOWN	RP11-104L21.2	1	2	-0.042494
chr1	167457742	167459891	167458816	ENSG00000273160.1	-	lincRNA	KNOWN	RP11-104L21.3	1	2	-0.042494
chr1	167519536	167520586	167520061	ENSG00000227776.1	+	processed_pseudogene	KNOWN	AKR1D1P1	1	2	-0.149669
chr1	167529677	167553767	167541722	ENSG00000143162.7	-	protein_coding	KNOWN	CREG1	2	4	0.005990
chr1	167591392	167591846	167591619	ENSG00000231029.2	+	processed_pseudogene	KNOWN	RP3-455J7.3	1	1	-0.088580
chr1	167627385	167630674	167629029	ENSG00000241666.2	-	antisense	KNOWN	RP3-455J7.4	1	2	-0.006369
chr1	167630093	167706249	167668171	ENSG00000198771.10	+	protein_coding	KNOWN	RCSD1	6	7	0.011426
chr1	167721192	167791919	167756555	ENSG00000197965.11	+	protein_coding	KNOWN	MPZL1	11	6	0.181809
chr1	167809388	167914215	167861801	ENSG00000143199.17	-	protein_coding	KNOWN	ADCY10	5	33	0.100517
chr1	167819898	167820248	167820073	ENSG00000250762.1	-	unprocessed_pseudogene	KNOWN	RP1-313L4.4	1	2	0.044943
chr1	167820406	167821224	167820815	ENSG00000232194.1	+	antisense	KNOWN	RP1-313L4.3	1	2	0.044943
chr1	167916729	167937040	167926884	ENSG00000143158.10	-	protein_coding	KNOWN	MPC2	3	6	0.007600
chr1	167935783	168075843	168005813	ENSG00000143164.15	+	protein_coding	KNOWN	DCAF6	12	22	-0.085505
chr1	167998660	167998726	167998693	ENSG00000221545.1	+	miRNA	KNOWN	MIR1255B2	1	1	0.047869
chr1	168055901	168056422	168056161	ENSG00000224837.1	-	processed_pseudogene	KNOWN	GCSHP5	1	1	-0.232443
chr1	168079543	168137667	168108605	ENSG00000143147.14	-	protein_coding	KNOWN	GPR161	10	8	0.324603
chr1	168178933	168202114	168190523	ENSG00000143155.12	+	protein_coding	KNOWN	TIPRL	2	7	-0.025957
chr1	168210616	168210969	168210792	ENSG00000237049.1	+	processed_pseudogene	KNOWN	RPL34P1	1	1	-0.052019
chr1	168215405	168215652	168215528	ENSG00000237131.1	+	processed_pseudogene	KNOWN	RP1-69E11.3	1	1	-0.052019
chr1	168225938	168253025	168239481	ENSG00000213064.9	+	protein_coding	KNOWN	SFT2D2	4	8	-0.138890
chr1	168245565	168247343	168246454	ENSG00000214262.4	-	transcribed_processed_pseudogene	KNOWN	ANKRD36BP1	2	1	-0.173990
chr1	168263375	168263481	168263428	ENSG00000206880.1	-	snRNA	KNOWN	RNU6-1310P	1	1	-0.023485
chr1	168281040	168314426	168297733	ENSG00000143178.12	+	protein_coding	KNOWN	TBX19	4	8	0.075000
chr1	168369054	168369601	168369327	ENSG00000227722.1	+	processed_pseudogene	KNOWN	RP5-1059H15.1	1	1	-0.231547
chr1	168375524	168375621	168375572	ENSG00000207974.1	+	miRNA	KNOWN	MIR557	1	1	0.113260
chr1	168400829	168422656	168411742	ENSG00000228697.1	-	lincRNA	KNOWN	RP5-968D22.1	2	4	-0.272789
chr1	168449672	168451211	168450441	ENSG00000215833.3	-	processed_pseudogene	KNOWN	QRSL1P1	1	1	0.066920
chr1	168464214	168495644	168479929	ENSG00000237658.1	-	lincRNA	KNOWN	RP5-968D22.3	1	5	0.248669
chr1	168540765	168543997	168542381	ENSG00000143185.3	-	protein_coding	KNOWN	XCL2	1	3	0.153021
chr1	168542737	168543354	168543045	ENSG00000227777.1	+	processed_pseudogene	KNOWN	RP4-738P11.3	1	1	0.153021
chr1	168576473	168582077	168579275	ENSG00000143184.4	+	protein_coding	KNOWN	XCL1	1	3	-0.398536
chr1	168578653	168579439	168579046	ENSG00000229757.2	-	processed_pseudogene	KNOWN	RP4-738P11.4	1	1	-0.398536
chr1	168695459	168729264	168712361	ENSG00000143196.4	-	protein_coding	KNOWN	DPT	1	4	-0.223284
chr1	168747796	168747882	168747839	ENSG00000221578.1	-	miRNA	NOVEL	AL049798.1	1	1	-0.189640
chr1	168763365	168774490	168768927	ENSG00000235736.1	-	lincRNA	KNOWN	RP1-10C16.1	1	2	-0.277978
chr1	168786939	168792886	168789912	ENSG00000225826.1	+	lincRNA	KNOWN	LINC00626	1	3	-0.475014
chr1	168898136	168898439	168898287	ENSG00000229612.1	+	processed_pseudogene	KNOWN	SUMO1P2	1	1	-0.187468
chr1	168903905	169087005	168995455	ENSG00000203601.3	-	antisense	KNOWN	LINC00970	1	5	-0.330728
chr1	168938467	168938923	168938695	ENSG00000213063.3	+	processed_pseudogene	KNOWN	RPL29P7	1	1	-0.644974
chr1	169067264	169067364	169067314	ENSG00000252987.1	+	rRNA	KNOWN	RNA5SP66	1	1	-0.461492
chr1	169104124	169104907	169104515	ENSG00000237707.1	+	antisense	KNOWN	RP5-1018K9.1	1	2	0.009998
chr1	169105697	169132722	169119209	ENSG00000143153.12	+	protein_coding	KNOWN	ATP1B1	3	7	-0.096573
chr1	169132531	169367967	169250249	ENSG00000143156.13	-	protein_coding	KNOWN	NME7	14	13	-0.411359
chr1	169310665	169322479	169316572	ENSG00000235575.1	+	antisense	KNOWN	RP4-800F24.1	1	2	-0.558934
chr1	169367970	169396540	169382255	ENSG00000117475.13	+	protein_coding	KNOWN	BLZF1	5	8	-0.470925
chr1	169394870	169460669	169427769	ENSG00000117477.12	-	protein_coding	KNOWN	CCDC181	7	7	-0.550548
chr1	169463909	169486003	169474956	ENSG00000117479.12	-	protein_coding	KNOWN	SLC19A2	2	6	-0.189168
chr1	169474060	169474159	169474109	ENSG00000234604.2	-	processed_pseudogene	KNOWN	RP1-206D15.5	1	1	-0.004516
chr1	169486076	169486986	169486531	ENSG00000213062.4	+	lincRNA	KNOWN	RP1-206D15.6	1	1	-0.004516
chr1	169514166	169586588	169550377	ENSG00000198734.10	-	protein_coding	KNOWN	F5	3	25	-0.406868
chr1	169588849	169630193	169609521	ENSG00000174175.16	-	protein_coding	KNOWN	SELP	7	17	-0.540492
chr1	169662007	169854080	169758043	ENSG00000000460.16	+	protein_coding	KNOWN	C1orf112	9	29	-0.302768
chr1	169690667	169711698	169701182	ENSG00000188404.8	-	protein_coding	KNOWN	SELL	6	9	-0.168055
chr1	169722641	169764705	169743673	ENSG00000007908.15	-	protein_coding	KNOWN	SELE	7	14	-0.476632
chr1	169762929	169764648	169763788	ENSG00000230704.1	-	lincRNA	KNOWN	RP1-117P20.3	1	2	-0.394886
chr1	169792529	169794966	169793747	ENSG00000171806.11	-	protein_coding	KNOWN	METTL18	3	2	-0.156921
chr1	169849631	169894267	169871949	ENSG00000000457.13	-	protein_coding	KNOWN	SCYL3	5	14	0.029844
chr1	169859756	169860052	169859904	ENSG00000239494.2	+	misc_RNA	KNOWN	RN7SL333P	1	1	-0.204250
chr1	169921326	170085208	170003267	ENSG00000075945.12	-	protein_coding	KNOWN	KIFAP3	6	21	-0.463301
chr1	169957942	169958246	169958094	ENSG00000243051.3	-	misc_RNA	KNOWN	RN7SL269P	1	1	-0.379760
chr1	169990067	169990196	169990131	ENSG00000235378.2	+	processed_pseudogene	KNOWN	MRPS10P1	1	1	-0.648249
chr1	170024077	170024683	170024380	ENSG00000232959.1	+	antisense	KNOWN	RP11-332H17.1	1	2	-0.414070
chr1	170115636	170116576	170116106	ENSG00000224896.2	+	processed_pseudogene	KNOWN	SIGLEC30P	1	1	0.135581
chr1	170146001	170167790	170156895	ENSG00000203740.3	+	protein_coding	KNOWN	METTL11B	2	5	-0.274806
chr1	170151378	170151462	170151420	ENSG00000263390.1	+	miRNA	KNOWN	MIR3119-1	1	1	-0.245878
chr1	170174403	170241287	170207845	ENSG00000233985.1	+	lincRNA	KNOWN	RP11-297H3.3	1	4	-0.090646
chr1	170211010	170211457	170211233	ENSG00000238051.1	-	processed_pseudogene	KNOWN	ISCUP1	1	1	0.012557
chr1	170271603	170284208	170277905	ENSG00000224286.5	-	lincRNA	KNOWN	LINC01142	2	3	-0.208182
chr1	170369223	170370367	170369795	ENSG00000226967.1	-	processed_pseudogene	KNOWN	HAUS4P1	1	1	-0.203253
chr1	170370213	170370295	170370254	ENSG00000263384.1	-	miRNA	NOVEL	AL354732.1	1	1	-0.244604
chr1	170460453	170532647	170496550	ENSG00000231407.5	-	antisense	KNOWN	RP11-576I22.2	4	4	-0.237895
chr1	170532129	170553446	170542787	ENSG00000120370.12	+	protein_coding	KNOWN	GORAB	6	7	-0.249240
chr1	170587249	170588236	170587742	ENSG00000225545.1	-	lincRNA	KNOWN	RP11-545I10.2	1	2	0.243995
chr1	170598854	170647339	170623096	ENSG00000235303.1	+	lincRNA	KNOWN	RP1-79C4.1	1	3	-0.032895
chr1	170662728	170739419	170701073	ENSG00000116132.11	+	protein_coding	KNOWN	PRRX1	8	5	0.121313
chr1	170667381	170669425	170668403	ENSG00000271811.1	+	lincRNA	KNOWN	RP1-79C4.4	1	1	-0.149714
chr1	170935471	171064765	171000118	ENSG00000117501.14	+	protein_coding	KNOWN	MROH9	3	22	-0.240595
chr1	171041347	171041435	171041391	ENSG00000281281.1	-	miRNA	NOVEL	BX284613.1	1	1	-0.311364
chr1	171083565	171085205	171084385	ENSG00000226552.2	+	processed_pseudogene	KNOWN	RP5-1092L12.2	1	1	-0.323046
chr1	171090877	171117819	171104348	ENSG00000007933.12	+	protein_coding	KNOWN	FMO3	6	9	-0.378195
chr1	171101728	171101806	171101767	ENSG00000221390.1	-	miRNA	KNOWN	MIR1295A	1	1	-0.454151
chr1	171137740	171161568	171149654	ENSG00000117507.5	+	unitary_pseudogene	KNOWN	FMO6P	3	8	0.043627
chr1	171185208	171211230	171198219	ENSG00000094963.13	+	protein_coding	KNOWN	FMO2	7	9	-0.195675
chr1	171199244	171227788	171213516	ENSG00000225243.5	-	antisense	KNOWN	RP1-127D3.4	3	3	0.031104
chr1	171247580	171251794	171249687	ENSG00000231424.2	-	antisense	KNOWN	RP1-45C12.1	1	2	-0.057326
chr1	171248471	171285978	171267224	ENSG00000010932.15	+	protein_coding	KNOWN	FMO1	9	9	-0.019193
chr1	171253906	171254022	171253964	ENSG00000206692.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.037776
chr1	171270954	171271590	171271272	ENSG00000230547.1	-	processed_pseudogene	KNOWN	HMGB1P11	1	1	0.009099
chr1	171314208	171342084	171328146	ENSG00000076258.9	+	protein_coding	KNOWN	FMO4	5	10	0.034166
chr1	171345089	171345320	171345204	ENSG00000225704.2	+	processed_pseudogene	KNOWN	RP4-798A17.5	1	1	-0.051500
chr1	171345105	171345307	171345206	ENSG00000268062.1	-	processed_pseudogene	KNOWN	TOP1P1	1	1	-0.051500
chr1	171392229	171392790	171392509	ENSG00000239428.2	+	processed_pseudogene	KNOWN	GM2AP2	1	1	-0.069371
chr1	171418644	171418750	171418697	ENSG00000202082.1	-	snRNA	KNOWN	RNU6-290P	1	1	0.338907
chr1	171444699	171444963	171444831	ENSG00000234333.2	-	processed_pseudogene	KNOWN	CYCSP53	1	1	0.157209
chr1	171485551	171593511	171539531	ENSG00000117523.15	+	protein_coding	KNOWN	PRRC2C	12	34	0.027792
chr1	171492411	171492704	171492557	ENSG00000239373.3	+	misc_RNA	KNOWN	RN7SL425P	1	1	0.351960
chr1	171519816	171519913	171519864	ENSG00000201126.1	-	snRNA	KNOWN	RNU6-773P	1	1	-0.003692
chr1	171591083	171591145	171591114	ENSG00000276381.1	+	miRNA	NOVEL	Z98750.1	1	1	0.151698
chr1	171635417	171652683	171644050	ENSG00000034971.14	-	protein_coding	KNOWN	MYOC	2	4	0.266953
chr1	171670517	171670939	171670728	ENSG00000233328.3	-	processed_pseudogene	KNOWN	PFN1P1	1	1	0.156122
chr1	171683128	171684438	171683783	ENSG00000230364.1	-	processed_pseudogene	KNOWN	RPL4P3	1	1	0.156122
chr1	171700160	171742247	171721203	ENSG00000117533.14	-	protein_coding	KNOWN	VAMP4	4	9	-0.037918
chr1	171751543	171752025	171751784	ENSG00000232261.1	-	unprocessed_pseudogene	KNOWN	RP4-560B9.5	1	2	-0.000126
chr1	171755803	171756323	171756063	ENSG00000271459.1	-	processed_pseudogene	KNOWN	RP4-560B9.6	1	1	-0.000126
chr1	171762074	171762524	171762299	ENSG00000236741.4	+	processed_pseudogene	KNOWN	RP4-560B9.4	1	1	-0.000126
chr1	171768070	171768175	171768122	ENSG00000253060.1	+	scaRNA	NOVEL	SCARNA20	1	1	-0.000126
chr1	171781664	171814023	171797843	ENSG00000010165.19	+	protein_coding	KNOWN	METTL13	7	8	0.148303
chr1	171803517	171803939	171803728	ENSG00000213060.4	+	processed_pseudogene	KNOWN	RP4-612B18.3	1	1	0.239890
chr1	171824610	171824959	171824784	ENSG00000224600.5	-	processed_pseudogene	KNOWN	RP4-612B18.1	1	1	0.023279
chr1	171841498	172418466	172129982	ENSG00000197959.13	+	protein_coding	KNOWN	DNM3	8	21	-0.138849
chr1	171864187	171864687	171864437	ENSG00000233540.1	+	sense_intronic	KNOWN	DNM3-IT1	1	2	-0.030264
chr1	172136531	172144794	172140662	ENSG00000230630.2	-	antisense	KNOWN	DNM3OS	1	4	-0.174402
chr1	172138798	172138907	172138852	ENSG00000207949.1	-	miRNA	KNOWN	MIR214	1	1	-0.174402
chr1	172144535	172144644	172144589	ENSG00000208024.1	-	miRNA	KNOWN	MIR199A2	1	1	-0.174402
chr1	172366540	172366646	172366593	ENSG00000206684.1	+	snRNA	KNOWN	RNU6-157P	1	1	-0.383742
chr1	172370189	172444086	172407137	ENSG00000135845.9	-	protein_coding	KNOWN	PIGC	7	5	-0.096450
chr1	172420688	172468831	172444759	ENSG00000180999.10	+	protein_coding	KNOWN	C1orf105	5	7	0.184719
chr1	172532349	172611833	172572091	ENSG00000094975.13	+	protein_coding	KNOWN	SUCO	10	24	-0.025598
chr1	172613428	172613534	172613481	ENSG00000251943.1	-	snRNA	KNOWN	RNU6-693P	1	1	-0.003165
chr1	172659018	172666874	172662946	ENSG00000117560.7	+	protein_coding	KNOWN	FASLG	2	4	-0.046288
chr1	172748560	172749502	172749031	ENSG00000229785.1	+	processed_pseudogene	KNOWN	SLC25A38P1	1	1	0.045299
chr1	172752586	172752924	172752755	ENSG00000279061.1	+	TEC	KNOWN	RP3-332O11.2	1	1	-0.043236
chr1	172775905	173064015	172919960	ENSG00000224228.2	+	lincRNA	KNOWN	RP1-15D23.2	1	5	0.029483
chr1	172885947	172886258	172886102	ENSG00000227177.1	-	processed_pseudogene	KNOWN	AIMP1P2	1	1	-0.177615
chr1	172906900	172907684	172907292	ENSG00000224000.1	+	lincRNA	KNOWN	RP3-471M13.2	1	2	0.012068
chr1	173039960	173050963	173045461	ENSG00000120337.8	-	protein_coding	KNOWN	TNFSF18	1	3	-0.299286
chr1	173141100	173142350	173141725	ENSG00000230849.2	-	processed_pseudogene	KNOWN	GOT2P2	1	1	0.023279
chr1	173174300	173175503	173174901	ENSG00000226375.1	-	lincRNA	KNOWN	RP3-395P12.2	1	2	0.071528
chr1	173183734	173207313	173195523	ENSG00000117586.10	-	protein_coding	KNOWN	TNFSF4	3	3	0.010072
chr1	173351689	173352004	173351846	ENSG00000232751.1	+	processed_pseudogene	KNOWN	RP11-296O14.1	1	1	0.075597
chr1	173362397	173363733	173363065	ENSG00000231615.2	-	processed_pseudogene	KNOWN	RP11-296O14.2	1	1	0.075597
chr1	173417793	173461362	173439577	ENSG00000203739.3	-	antisense	KNOWN	RP11-296O14.3	2	3	0.184470
chr1	173477266	173488807	173483036	ENSG00000117592.8	+	protein_coding	KNOWN	PRDX6	3	5	0.011373
chr1	173500464	173603094	173551779	ENSG00000162753.11	-	protein_coding	KNOWN	SLC9C2	4	28	-0.181618
chr1	173555251	173612772	173584011	ENSG00000238272.1	+	antisense	KNOWN	RP3-436N22.3	1	3	-0.130943
chr1	173609561	173669862	173639711	ENSG00000183831.6	-	protein_coding	KNOWN	ANKRD45	2	6	-0.147111
chr1	173635773	173637134	173636453	ENSG00000232113.1	+	antisense	KNOWN	RP11-360D2.1	1	2	-0.221166
chr1	173714941	173786702	173750821	ENSG00000076321.10	+	protein_coding	KNOWN	KLHL20	5	12	0.030286
chr1	173741674	173741928	173741801	ENSG00000225591.2	+	processed_pseudogene	KNOWN	RP11-360D2.2	1	1	0.177383
chr1	173791548	173791887	173791717	ENSG00000200674.1	+	misc_RNA	KNOWN	RN7SKP160	1	1	0.132634
chr1	173799550	173824720	173812135	ENSG00000120334.15	-	protein_coding	KNOWN	CENPL	9	7	0.015754
chr1	173808489	173808622	173808555	ENSG00000252357.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.132634
chr1	173824503	173858546	173841524	ENSG00000117593.9	+	protein_coding	KNOWN	DARS2	3	17	0.112071
chr1	173863248	173863941	173863594	ENSG00000270084.1	+	antisense	KNOWN	GAS5-AS1	1	1	0.373930
chr1	173863900	173868882	173866391	ENSG00000234741.7	-	processed_transcript	KNOWN	GAS5	29	13	0.373930
chr1	173868082	173903549	173885815	ENSG00000185278.14	+	protein_coding	KNOWN	ZBTB37	5	5	0.232041
chr1	173903804	173917378	173910591	ENSG00000117601.13	-	protein_coding	KNOWN	SERPINC1	4	7	-0.031033
chr1	173921070	173921200	173921135	ENSG00000252231.1	+	rRNA	KNOWN	RNA5SP67	1	1	0.055650
chr1	173931214	174022297	173976755	ENSG00000135870.11	-	protein_coding	KNOWN	RC3H1	6	20	-0.060854
chr1	173969318	173969436	173969377	ENSG00000200755.1	-	rRNA	KNOWN	RNA5SP68	1	1	-0.180693
chr1	174009267	174016206	174012736	ENSG00000236535.1	-	sense_intronic	KNOWN	RC3H1-IT1	1	2	0.065711
chr1	174022509	174022985	174022747	ENSG00000224977.1	+	lincRNA	KNOWN	RP11-160H22.3	1	2	0.082406
chr1	174090136	174090474	174090305	ENSG00000225713.5	-	processed_pseudogene	KNOWN	RPL30P1	1	1	0.157368
chr1	174095241	174095302	174095271	ENSG00000238365.2	-	snRNA	KNOWN	RNU7-57P	1	1	0.157368
chr1	174115300	174160004	174137652	ENSG00000227373.5	-	lincRNA	KNOWN	RP11-160H22.5	4	4	-0.114348
chr1	174159410	174995308	174577359	ENSG00000152061.22	+	protein_coding	KNOWN	RABGAP1L	23	21	-0.318620
chr1	174348265	174348355	174348310	ENSG00000266125.1	+	miRNA	NOVEL	AL022400.1	1	1	-0.425857
chr1	174367105	174368039	174367572	ENSG00000237317.2	-	processed_pseudogene	KNOWN	RP4-809F4.1	1	1	0.147274
chr1	174448111	174449198	174448654	ENSG00000203737.3	+	protein_coding	KNOWN	GPR52	1	1	-0.659329
chr1	174756850	174757119	174756984	ENSG00000223828.1	-	processed_pseudogene	KNOWN	BANF1P4	1	1	-0.301490
chr1	174849667	174850168	174849917	ENSG00000231378.1	-	processed_pseudogene	KNOWN	NDUFAF4P4	1	1	-0.214679
chr1	174892417	174893155	174892786	ENSG00000237249.1	+	processed_pseudogene	KNOWN	RP1-102G20.2	1	2	0.063795
chr1	174896958	174897996	174897477	ENSG00000223525.1	+	sense_intronic	KNOWN	RABGAP1L-IT1	1	2	0.063795
chr1	174922107	174922440	174922273	ENSG00000235869.1	-	processed_pseudogene	KNOWN	RP1-102G20.4	1	1	-0.000520
chr1	174934947	174954261	174944604	ENSG00000229531.5	-	antisense	KNOWN	RP1-102G20.5	2	6	-0.246172
chr1	174996524	174996629	174996576	ENSG00000252552.1	+	snRNA	KNOWN	RNU6-307P	1	1	-0.182371
chr1	174999163	175011715	175005439	ENSG00000116161.17	+	protein_coding	KNOWN	CACYBP	9	6	-0.185735
chr1	175010789	175023425	175017107	ENSG00000120333.4	-	protein_coding	KNOWN	MRPS14	3	3	-0.206975
chr1	175022479	175022580	175022529	ENSG00000206659.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.206975
chr1	175044626	175045648	175045137	ENSG00000181101.7	-	processed_pseudogene	KNOWN	SDCCAG3P2	1	1	-0.310379
chr1	175067858	175148066	175107962	ENSG00000120332.15	+	protein_coding	KNOWN	TNN	3	19	-0.036262
chr1	175156987	175192999	175174993	ENSG00000235750.9	-	protein_coding	KNOWN	KIAA0040	6	5	0.055400
chr1	175203228	175204849	175204038	ENSG00000230687.1	-	lincRNA	KNOWN	RP5-1114G22.2	1	2	-0.219668
chr1	175297080	175297240	175297160	ENSG00000233946.2	+	processed_pseudogene	KNOWN	RP5-1114G22.1	1	1	-0.515269
chr1	175307218	175335459	175321338	ENSG00000260990.1	+	antisense	KNOWN	RP3-518E13.2	1	5	-0.223291
chr1	175315194	175743770	175529482	ENSG00000116147.16	-	protein_coding	KNOWN	TNR	3	24	-0.242052
chr1	175538775	175556818	175547796	ENSG00000235628.1	-	sense_intronic	KNOWN	TNR-IT1	1	2	-0.256383
chr1	175877343	175880468	175878905	ENSG00000224718.1	+	lincRNA	KNOWN	RP11-222A5.1	1	3	-0.066073
chr1	175904762	175920513	175912637	ENSG00000227740.1	-	lincRNA	KNOWN	RP11-318C24.2	1	3	-0.127856
chr1	175921975	175922145	175922060	ENSG00000230777.1	+	processed_pseudogene	KNOWN	RP11-318C24.1	1	1	-0.255932
chr1	175944831	176207493	176076162	ENSG00000143207.19	-	protein_coding	KNOWN	RFWD2	10	20	-0.360838
chr1	175968385	175968477	175968431	ENSG00000281096.1	-	miRNA	NOVEL	AL590723.1	1	1	-0.323046
chr1	175968398	175968540	175968469	ENSG00000252906.1	-	scaRNA	KNOWN	SCARNA3	1	1	-0.323046
chr1	176017277	176018760	176018018	ENSG00000228686.2	+	antisense	KNOWN	RP11-492I21.1	1	2	-0.252538
chr1	176207648	176229330	176218489	ENSG00000236021.1	+	antisense	KNOWN	RP11-195C7.1	1	3	-0.276385
chr1	176217541	176217602	176217571	ENSG00000273629.1	+	snRNA	NOVEL	U7	1	1	-0.238925
chr1	176231200	176231830	176231515	ENSG00000232463.1	-	processed_pseudogene	KNOWN	RP11-195C7.2	1	1	-0.255932
chr1	176243862	176244029	176243945	ENSG00000253025.1	-	snRNA	KNOWN	RNU2-12P	1	1	-0.255932
chr1	176272483	176273402	176272942	ENSG00000227815.2	+	unprocessed_pseudogene	KNOWN	RP11-195C7.3	1	3	-0.122133
chr1	176305672	176306095	176305883	ENSG00000231020.1	-	processed_pseudogene	KNOWN	RP11-357J22.1	1	1	-0.642027
chr1	176367699	176368401	176368050	ENSG00000225904.1	-	processed_pseudogene	KNOWN	MORF4L1P7	1	1	-0.492971
chr1	176463171	176845605	176654388	ENSG00000116183.10	+	protein_coding	KNOWN	PAPPA2	5	23	-0.362217
chr1	176616273	176616786	176616529	ENSG00000237514.3	-	processed_pseudogene	KNOWN	PTP4A1P7	1	1	-0.577184
chr1	176857302	177164973	177011137	ENSG00000152092.15	-	protein_coding	KNOWN	ASTN1	5	23	-0.348218
chr1	177029343	177029452	177029397	ENSG00000202609.3	-	miRNA	KNOWN	MIR488	1	1	-0.395057
chr1	177111386	177111510	177111448	ENSG00000280731.1	+	miRNA	NOVEL	AL021398.2	1	1	-0.516054
chr1	177171497	177282422	177226959	ENSG00000198797.6	+	protein_coding	KNOWN	BRINP2	3	8	-0.189308
chr1	177186360	177186452	177186406	ENSG00000222749.1	-	miRNA	NOVEL	AL021398.1	1	1	-0.159547
chr1	177351586	177366272	177358929	ENSG00000224968.1	+	lincRNA	KNOWN	RP1-35C21.1	1	4	-0.206448
chr1	177393287	177597709	177495498	ENSG00000227579.5	-	lincRNA	KNOWN	RP1-35C21.2	2	4	-0.462792
chr1	177552870	177552960	177552915	ENSG00000266393.1	+	miRNA	NOVEL	AL122019.1	1	1	-0.871939
chr1	177700524	177710330	177705427	ENSG00000236720.1	+	lincRNA	KNOWN	RP11-63B19.1	1	4	-0.217705
chr1	177923956	177984303	177954129	ENSG00000120341.18	-	protein_coding	KNOWN	SEC16B	8	26	0.030644
chr1	177928788	178038007	177983397	ENSG00000254154.8	-	processed_transcript	KNOWN	RP4-798P15.3	3	31	-0.086486
chr1	178006136	178037950	178022043	ENSG00000242193.9	-	unitary_pseudogene	KNOWN	RP11-568K15.1	4	10	-0.275321
chr1	178017127	178017343	178017235	ENSG00000276563.1	+	processed_pseudogene	KNOWN	RP11-568K15.2	1	1	-0.393435
chr1	178091508	178093984	178092746	ENSG00000224687.1	-	lincRNA	KNOWN	RASAL2-AS1	3	2	0.013518
chr1	178094141	178484147	178289144	ENSG00000075391.16	+	protein_coding	KNOWN	RASAL2	5	18	-0.160281
chr1	178194342	178194709	178194525	ENSG00000270575.1	-	processed_pseudogene	KNOWN	RP11-21M7.2	1	2	-0.192576
chr1	178411616	178411972	178411794	ENSG00000213058.3	+	processed_pseudogene	KNOWN	RP4-765C7.2	1	1	0.143707
chr1	178479247	178482365	178480806	ENSG00000279210.1	-	antisense	KNOWN	RP4-593C16.4	1	2	-0.143496
chr1	178484408	178484682	178484545	ENSG00000264809.2	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.143496
chr1	178495896	178499634	178497765	ENSG00000188585.6	-	lincRNA	KNOWN	LINC00083	1	4	0.485906
chr1	178513077	178548602	178530839	ENSG00000240021.9	+	protein_coding	KNOWN	TEX35	7	16	0.292666
chr1	178542752	178548889	178545820	ENSG00000213057.5	+	lincRNA	KNOWN	C1orf220	2	3	0.282814
chr1	178560913	178561029	178560971	ENSG00000201347.1	+	rRNA	KNOWN	RNA5SP69	1	1	0.241135
chr1	178651706	178652282	178651994	ENSG00000273384.1	+	lincRNA	KNOWN	RP5-1098D14.1	1	1	0.100657
chr1	178677749	178677834	178677791	ENSG00000266417.1	+	miRNA	KNOWN	MIR4424	1	1	0.125350
chr1	178724306	178726285	178725295	ENSG00000273062.1	-	antisense	KNOWN	RP11-428K3.1	1	1	0.201616
chr1	178725147	178921841	178823494	ENSG00000116191.17	+	protein_coding	KNOWN	RALGPS2	9	20	-0.065103
chr1	178746683	178747754	178747218	ENSG00000228196.1	-	processed_pseudogene	KNOWN	PTPN2P1	1	1	0.118627
chr1	178753654	178753772	178753713	ENSG00000201791.1	-	snoRNA	NOVEL	SNORA63	1	1	0.047869
chr1	178849705	178871052	178860378	ENSG00000116194.12	-	protein_coding	KNOWN	ANGPTL1	3	6	-0.477597
chr1	179025804	179076562	179051183	ENSG00000116199.11	+	protein_coding	KNOWN	FAM20B	2	8	0.118020
chr1	179035309	179035652	179035480	ENSG00000232750.2	-	processed_pseudogene	KNOWN	RP11-177A2.5	1	1	-0.036165
chr1	179081377	179098023	179089700	ENSG00000186283.13	+	protein_coding	KNOWN	TOR3A	7	6	0.450861
chr1	179099327	179229684	179164505	ENSG00000143322.19	-	protein_coding	KNOWN	ABL2	11	13	0.085207
chr1	179137764	179137934	179137849	ENSG00000234041.1	+	processed_pseudogene	KNOWN	RP11-345I18.1	1	1	0.442091
chr1	179183734	179184547	179184140	ENSG00000231905.2	+	processed_pseudogene	KNOWN	SETP10	1	1	-0.113233
chr1	179196473	179196579	179196526	ENSG00000212338.1	+	snoRNA	NOVEL	SNORA67	1	1	0.074918
chr1	179201487	179201627	179201557	ENSG00000201619.1	+	snoRNA	NOVEL	SNORA67	1	1	0.074918
chr1	179201705	179201926	179201815	ENSG00000231564.1	+	processed_pseudogene	KNOWN	EIF4A1P11	1	1	0.074918
chr1	179220938	179222125	179221531	ENSG00000225711.1	+	processed_pseudogene	KNOWN	RP11-345I18.4	1	2	-0.169500
chr1	179255733	179256081	179255907	ENSG00000223794.1	+	processed_pseudogene	KNOWN	COX5BP8	1	1	-0.035013
chr1	179271116	179271266	179271191	ENSG00000228191.1	-	processed_pseudogene	KNOWN	RP11-345I18.6	1	1	-0.390160
chr1	179293714	179358680	179326197	ENSG00000057252.12	+	protein_coding	KNOWN	SOAT1	4	16	-0.215630
chr1	179365720	179554735	179460227	ENSG00000162779.20	+	protein_coding	KNOWN	AXDND1	15	27	-0.410666
chr1	179447578	179448440	179448009	ENSG00000224620.2	-	processed_pseudogene	KNOWN	MEF2AP1	1	1	-0.702539
chr1	179447602	179457315	179452458	ENSG00000236539.3	-	processed_pseudogene	KNOWN	HNRNPA1P54	1	1	-0.456702
chr1	179543201	179548922	179546061	ENSG00000261250.1	-	antisense	KNOWN	RP11-545A16.1	1	2	-0.336851
chr1	179550539	179575952	179563245	ENSG00000116218.12	-	protein_coding	KNOWN	NPHS2	2	8	-0.268312
chr1	179576268	179576349	179576308	ENSG00000251875.1	+	snRNA	KNOWN	RNU5F-2P	1	1	-0.437688
chr1	179586705	179589175	179587940	ENSG00000227141.2	+	processed_pseudogene	KNOWN	RP11-545A16.3	1	1	-0.437688
chr1	179590372	179591305	179590838	ENSG00000261060.1	+	sense_overlapping	KNOWN	RP11-545A16.4	1	1	-0.038405
chr1	179591613	179691272	179641442	ENSG00000162782.15	+	protein_coding	KNOWN	TDRD5	4	18	-0.491627
chr1	179710250	179710346	179710298	ENSG00000221547.1	-	miRNA	NOVEL	AL359853.1	1	1	-0.140893
chr1	179730217	179742697	179736457	ENSG00000243062.5	+	lincRNA	KNOWN	RP11-12M5.1	2	2	-0.430686
chr1	179743163	179816198	179779680	ENSG00000143340.6	+	protein_coding	KNOWN	FAM163A	1	5	0.020290
chr1	179816184	179818191	179817187	ENSG00000229407.5	-	antisense	KNOWN	RP11-12M5.3	2	2	0.326083
chr1	179829609	179836124	179832866	ENSG00000231966.1	-	lincRNA	KNOWN	RP11-12M5.4	1	2	0.354761
chr1	179839967	179877803	179858885	ENSG00000169905.12	-	protein_coding	KNOWN	TOR1AIP2	6	7	0.070327
chr1	179881607	179882595	179882101	ENSG00000272906.1	-	lincRNA	KNOWN	RP11-533E19.7	1	1	-0.108827
chr1	179882042	179925000	179903521	ENSG00000143337.18	+	protein_coding	KNOWN	TOR1AIP1	12	11	-0.024349
chr1	179900262	179900564	179900413	ENSG00000264916.2	+	misc_RNA	KNOWN	RN7SL230P	1	1	0.212286
chr1	179926641	179941796	179934218	ENSG00000261831.2	-	lincRNA	KNOWN	RP11-533E19.2	1	3	-0.072229
chr1	179953184	179954440	179953812	ENSG00000260360.1	-	lincRNA	KNOWN	RP11-533E19.5	1	1	0.156481
chr1	179954738	180114880	180034809	ENSG00000135837.15	+	protein_coding	KNOWN	CEP350	11	38	-0.106324
chr1	179968686	179969506	179969096	ENSG00000235145.2	+	processed_pseudogene	KNOWN	RPSAP16	1	1	0.156481
chr1	180000438	180000808	180000623	ENSG00000223450.1	-	processed_pseudogene	KNOWN	RP11-52I18.1	1	1	-0.200562
chr1	180117140	180123890	180120515	ENSG00000261817.1	-	lincRNA	KNOWN	RP11-502H18.2	1	3	0.039524
chr1	180139521	180139633	180139577	ENSG00000264286.2	+	miRNA	NOVEL	AL390718.1	1	1	0.469149
chr1	180154834	180204030	180179432	ENSG00000116260.16	+	protein_coding	KNOWN	QSOX1	4	13	0.362571
chr1	180230286	180278982	180254634	ENSG00000121454.5	+	protein_coding	KNOWN	LHX4	3	6	0.454887
chr1	180269653	180502954	180386303	ENSG00000230124.6	-	protein_coding	KNOWN	ACBD6	6	8	-0.119172
chr1	180349158	180349251	180349204	ENSG00000281572.1	-	snRNA	NOVEL	U6	1	1	0.258642
chr1	180434800	180435936	180435368	ENSG00000235060.1	+	processed_pseudogene	KNOWN	VDAC1P4	1	2	-0.166160
chr1	180438314	180438390	180438352	ENSG00000265435.1	-	miRNA	KNOWN	MIR3121	1	1	-0.166160
chr1	180519016	180519119	180519067	ENSG00000206905.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.256803
chr1	180545832	180545931	180545881	ENSG00000266683.1	+	miRNA	NOVEL	AL358354.1	1	1	0.306117
chr1	180558976	180566518	180562747	ENSG00000236719.2	+	lincRNA	KNOWN	OVAAL	1	3	0.035724
chr1	180632004	180890251	180761127	ENSG00000143324.13	+	protein_coding	KNOWN	XPR1	5	15	-0.173074
chr1	180827895	180827992	180827943	ENSG00000266825.1	-	miRNA	NOVEL	AL590085.1	1	1	-0.100653
chr1	180906651	180909166	180907908	ENSG00000225857.5	+	lincRNA	KNOWN	RP11-46A10.2	2	4	0.109803
chr1	180913154	180951614	180932384	ENSG00000135835.10	+	protein_coding	KNOWN	KIAA1614	5	9	0.518613
chr1	180944042	180976482	180960262	ENSG00000243155.1	-	antisense	KNOWN	RP11-46A10.5	1	2	0.482913
chr1	180949699	180954887	180952293	ENSG00000232586.1	-	antisense	KNOWN	KIAA1614-AS1	1	2	0.537631
chr1	180964511	180965909	180965210	ENSG00000251520.1	+	unprocessed_pseudogene	KNOWN	RP11-46A10.6	1	2	0.545849
chr1	180970837	180971247	180971042	ENSG00000270711.1	+	processed_pseudogene	KNOWN	RP11-46A10.8	1	1	0.361510
chr1	180972712	181023121	180997916	ENSG00000135823.13	-	protein_coding	KNOWN	STX6	4	8	0.133998
chr1	181033425	181061938	181047681	ENSG00000153029.14	+	protein_coding	KNOWN	MR1	9	7	0.384336
chr1	181088712	181092899	181090805	ENSG00000162783.10	+	protein_coding	KNOWN	IER5	1	1	0.100745
chr1	181174484	181182208	181178346	ENSG00000237292.1	+	lincRNA	KNOWN	RP11-540K16.1	2	3	0.210636
chr1	181190471	181191149	181190810	ENSG00000225359.1	-	lincRNA	KNOWN	RP11-540K16.2	1	2	0.113796
chr1	181236388	181238604	181237496	ENSG00000179452.2	+	lincRNA	KNOWN	GM140	1	3	-0.231663
chr1	181413102	181808084	181610593	ENSG00000198216.10	+	protein_coding	KNOWN	CACNA1E	10	50	-0.223230
chr1	181668749	181669028	181668888	ENSG00000273573.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.296862
chr1	181771566	181771644	181771605	ENSG00000252977.1	+	rRNA	KNOWN	RNA5SP70	1	1	-0.166610
chr1	181812705	181813261	181812983	ENSG00000272880.1	+	lincRNA	KNOWN	RP11-33M22.2	1	1	-0.290342
chr1	181839473	181839774	181839623	ENSG00000222397.1	-	misc_RNA	KNOWN	RN7SKP229	1	1	-0.514472
chr1	182054570	182061712	182058141	ENSG00000179930.5	-	protein_coding	KNOWN	ZNF648	1	2	-0.373672
chr1	182062677	182069253	182065965	ENSG00000224810.1	-	lincRNA	KNOWN	RP11-538D16.2	1	3	-0.373672
chr1	182086551	182090112	182088331	ENSG00000225982.1	+	lincRNA	KNOWN	RP11-538D16.3	1	3	-0.353332
chr1	182127297	182128665	182127981	ENSG00000232309.1	-	lincRNA	KNOWN	GS1-122H1.1	1	3	-0.166470
chr1	182129310	182314061	182221685	ENSG00000228918.3	-	lincRNA	KNOWN	LINC01344	3	17	-0.081739
chr1	182182730	182183096	182182913	ENSG00000232096.1	-	processed_pseudogene	KNOWN	YPEL5P1	1	1	-0.057234
chr1	182327068	182327174	182327121	ENSG00000206764.1	+	snRNA	KNOWN	RNU6-152P	1	1	0.050413
chr1	182328497	182329007	182328752	ENSG00000228664.1	+	processed_pseudogene	KNOWN	RP11-416K24.1	1	1	0.050413
chr1	182336001	182336334	182336167	ENSG00000231684.3	+	processed_pseudogene	KNOWN	EIF1P3	1	1	-0.032815
chr1	182381704	182392206	182386955	ENSG00000135821.16	-	protein_coding	KNOWN	GLUL	13	8	-0.021367
chr1	182398117	182400616	182399366	ENSG00000203730.2	-	protein_coding	KNOWN	TEDDM1	1	1	0.084297
chr1	182407621	182414815	182411218	ENSG00000203729.8	+	lincRNA	KNOWN	LINC00272	2	4	-0.205828
chr1	182409192	182560599	182484895	ENSG00000121446.18	+	protein_coding	KNOWN	RGSL1	21	22	-0.295044
chr1	182433893	182434461	182434177	ENSG00000270443.1	-	processed_pseudogene	KNOWN	RP1-223H12.5	1	2	-0.200985
chr1	182441577	182442362	182441969	ENSG00000233537.1	+	unitary_pseudogene	KNOWN	TEDDM2P	1	1	-0.200985
chr1	182573634	182589256	182581445	ENSG00000135828.11	-	protein_coding	KNOWN	RNASEL	2	7	-0.151122
chr1	182576772	182577040	182576906	ENSG00000276839.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.151122
chr1	182598623	182604408	182601515	ENSG00000143333.6	-	protein_coding	KNOWN	RGS16	1	5	0.117229
chr1	182615254	182616629	182615941	ENSG00000261504.1	+	lincRNA	KNOWN	RP11-317P15.4	1	1	0.153721
chr1	182641816	182684576	182663196	ENSG00000135824.12	-	protein_coding	KNOWN	RGS8	7	7	-0.124124
chr1	182712862	182714544	182713703	ENSG00000227181.1	+	lincRNA	KNOWN	RP11-317P15.3	1	2	0.067879
chr1	182733792	182734779	182734285	ENSG00000271269.1	+	processed_pseudogene	KNOWN	RP11-317P15.6	1	2	-0.134973
chr1	182789293	182830384	182809838	ENSG00000135838.13	+	protein_coding	KNOWN	NPL	12	14	-0.072184
chr1	182839369	182887751	182863560	ENSG00000135829.16	+	protein_coding	KNOWN	DHX9	8	28	-0.115206
chr1	182899865	182953525	182926695	ENSG00000157060.14	-	protein_coding	KNOWN	SHCBP1L	6	13	-0.017210
chr1	182942115	182942404	182942259	ENSG00000224040.1	-	processed_pseudogene	KNOWN	HMGN1P4	1	1	-0.160774
chr1	182944365	182944490	182944427	ENSG00000199837.1	-	rRNA	KNOWN	RNA5SP71	1	1	-0.160774
chr1	182944402	182944454	182944428	ENSG00000281615.1	-	miRNA	NOVEL	AL450304.2	1	1	-0.160774
chr1	182955390	182956148	182955769	ENSG00000226570.2	-	processed_pseudogene	KNOWN	RP11-505O17.1	1	1	0.028266
chr1	182959074	182960405	182959739	ENSG00000176855.11	-	processed_pseudogene	KNOWN	KRT18P28	1	1	0.028266
chr1	182959485	182959575	182959530	ENSG00000264768.1	-	miRNA	NOVEL	AL450304.1	1	1	0.028266
chr1	182982212	182982318	182982265	ENSG00000207472.1	-	snRNA	KNOWN	RNU6-41P	1	1	-0.171043
chr1	183023460	183145592	183084526	ENSG00000135862.5	+	protein_coding	KNOWN	LAMC1	6	28	0.199607
chr1	183138402	183141282	183139842	ENSG00000224468.3	-	antisense	KNOWN	RP11-181K3.4	1	3	0.114832
chr1	183186238	183244900	183215569	ENSG00000058085.14	+	protein_coding	KNOWN	LAMC2	4	23	0.277082
chr1	183248237	183418602	183333419	ENSG00000157064.10	-	protein_coding	KNOWN	NMNAT2	4	11	0.154238
chr1	183266602	183267285	183266943	ENSG00000233562.1	+	processed_pseudogene	KNOWN	RP11-548N1.1	1	1	0.134015
chr1	183460874	183472265	183466569	ENSG00000232860.7	-	processed_transcript	KNOWN	SMG7-AS1	3	5	-0.164663
chr1	183472216	183598246	183535231	ENSG00000116698.20	+	protein_coding	KNOWN	SMG7	15	24	0.033998
chr1	183510675	183510764	183510719	ENSG00000265042.1	-	miRNA	NOVEL	AL137800.1	1	1	-0.279977
chr1	183555563	183590876	183573219	ENSG00000116701.14	-	protein_coding	KNOWN	NCF2	7	16	0.318206
chr1	183620846	183635757	183628301	ENSG00000162704.15	-	protein_coding	KNOWN	ARPC5	5	4	0.289226
chr1	183636085	183928531	183782308	ENSG00000143344.15	+	protein_coding	KNOWN	RGL1	2	19	0.031455
chr1	183646404	183653316	183649860	ENSG00000173627.7	-	protein_coding	KNOWN	APOBEC4	2	2	0.069097
chr1	183709305	183710240	183709772	ENSG00000270994.1	-	processed_pseudogene	KNOWN	RP11-293B7.1	1	1	0.147319
chr1	183754418	183754937	183754677	ENSG00000227554.1	-	antisense	KNOWN	RP11-444D13.1	1	3	-0.246594
chr1	183783322	183783433	183783377	ENSG00000273774.1	-	miRNA	NOVEL	AL590422.1	1	1	0.068533
chr1	183929854	184037729	183983791	ENSG00000198756.10	-	protein_coding	KNOWN	COLGALT2	4	12	0.051112
chr1	184051677	184074212	184062944	ENSG00000198860.11	+	protein_coding	KNOWN	TSEN15	7	6	-0.066320
chr1	184171714	184171823	184171768	ENSG00000199840.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.027503
chr1	184315658	184315765	184315711	ENSG00000207080.2	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.025192
chr1	184329071	184332826	184330948	ENSG00000231791.1	+	lincRNA	KNOWN	RP11-382D12.1	1	2	-0.176089
chr1	184335658	184335949	184335803	ENSG00000244568.3	+	misc_RNA	KNOWN	RN7SL654P	1	1	-0.225623
chr1	184385753	184386704	184386228	ENSG00000271387.1	-	lincRNA	KNOWN	RP11-382D12.2	1	1	-0.030691
chr1	184387058	184629020	184508039	ENSG00000116667.12	+	protein_coding	KNOWN	C1orf21	4	6	-0.114652
chr1	184408337	184412360	184410348	ENSG00000230470.1	+	sense_intronic	KNOWN	GS1-115G20.1	1	2	-0.136995
chr1	184566511	184567835	184567173	ENSG00000232036.2	+	processed_pseudogene	KNOWN	GS1-115G20.2	1	1	-0.294477
chr1	184690231	184754913	184722572	ENSG00000116406.18	-	protein_coding	KNOWN	EDEM3	6	21	-0.309827
chr1	184790724	184974550	184882637	ENSG00000135842.16	-	protein_coding	KNOWN	FAM129A	5	14	0.001725
chr1	184821428	184821489	184821458	ENSG00000252222.1	-	snRNA	KNOWN	RNU7-13P	1	1	-0.129136
chr1	185001527	185008683	185005105	ENSG00000260976.1	+	lincRNA	KNOWN	GS1-120K12.4	1	2	-0.052825
chr1	185014951	185015067	185015009	ENSG00000201312.1	-	rRNA	KNOWN	RNA5SP72	1	1	-0.160929
chr1	185045364	185102608	185073986	ENSG00000121481.10	+	protein_coding	KNOWN	RNF2	4	7	0.110268
chr1	185071567	185072035	185071801	ENSG00000232792.2	-	processed_pseudogene	KNOWN	FTH1P25	1	1	0.042523
chr1	185118098	185157072	185137585	ENSG00000121486.11	-	protein_coding	KNOWN	TRMT1L	4	15	-0.127094
chr1	185157080	185291765	185224422	ENSG00000116668.12	+	protein_coding	KNOWN	SWT1	3	19	-0.171434
chr1	185171335	185171710	185171522	ENSG00000231084.2	-	processed_pseudogene	KNOWN	CTA-253N17.1	1	1	-0.088090
chr1	185226808	185227700	185227254	ENSG00000213051.3	-	processed_pseudogene	KNOWN	RPL5P5	1	1	-0.194126
chr1	185251313	185251411	185251362	ENSG00000201421.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.004516
chr1	185257911	185258015	185257963	ENSG00000206640.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.004516
chr1	185262286	185264356	185263321	ENSG00000233583.1	-	processed_pseudogene	KNOWN	RP4-635A23.3	1	3	-0.004516
chr1	185266535	185266627	185266581	ENSG00000252612.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.004516
chr1	185280844	185281816	185281330	ENSG00000238061.2	+	processed_pseudogene	KNOWN	RP4-635A23.4	1	1	-0.356993
chr1	185292384	185294372	185293378	ENSG00000279838.1	-	TEC	KNOWN	RP4-635A23.6	1	1	0.061295
chr1	185296388	185317329	185306858	ENSG00000116679.15	-	protein_coding	KNOWN	IVNS1ABP	9	16	0.059493
chr1	185317779	185318530	185318154	ENSG00000273004.1	+	lincRNA	KNOWN	GS1-279B7.2	1	1	0.056147
chr1	185321157	185335039	185328098	ENSG00000261024.6	-	lincRNA	KNOWN	GS1-279B7.1	3	4	0.031420
chr1	185434244	185434305	185434274	ENSG00000252407.1	+	snRNA	KNOWN	RNU7-183P	1	1	0.083275
chr1	185435839	185436047	185435943	ENSG00000270920.1	+	processed_pseudogene	KNOWN	FAM195DP	1	1	0.083275
chr1	185518651	185520986	185519818	ENSG00000279401.1	+	TEC	KNOWN	GS1-204I12.3	1	1	0.182190
chr1	185558372	185628527	185593449	ENSG00000228309.6	-	lincRNA	KNOWN	LINC01350	4	5	0.160602
chr1	185630428	185630528	185630478	ENSG00000207108.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.099985
chr1	185634073	185634182	185634127	ENSG00000201596.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.099985
chr1	185655002	185657168	185656085	ENSG00000261729.1	+	lincRNA	KNOWN	GS1-204I12.4	1	2	0.208089
chr1	185734551	186190949	185962750	ENSG00000143341.11	+	protein_coding	KNOWN	HMCN1	5	107	-0.179321
chr1	186176814	186177302	186177058	ENSG00000224691.1	-	antisense	KNOWN	GS1-174L6.4	1	2	-0.106422
chr1	186296279	186314562	186305420	ENSG00000116690.12	+	protein_coding	KNOWN	PRG4	6	13	-0.230685
chr1	186311652	186375693	186343672	ENSG00000047410.13	-	protein_coding	KNOWN	TPR	9	51	-0.256328
chr1	186311825	186311928	186311876	ENSG00000202025.1	-	snRNA	KNOWN	RNU6-1240P	1	1	-0.160774
chr1	186375838	186421378	186398608	ENSG00000157181.15	+	protein_coding	KNOWN	C1orf27	5	14	-0.166886
chr1	186394991	186396776	186395883	ENSG00000279374.1	-	protein_coding	KNOWN	AL596220.1	1	3	-0.229936
chr1	186400572	186401455	186401013	ENSG00000262180.1	+	protein_coding	KNOWN	OCLM	1	1	-0.229936
chr1	186435161	186470291	186452726	ENSG00000229739.2	+	antisense	KNOWN	RP11-295K2.3	2	5	-0.267804
chr1	186443566	186461122	186452344	ENSG00000116703.13	-	protein_coding	KNOWN	PDC	2	4	-0.284856
chr1	186521773	186522304	186522038	ENSG00000273198.1	+	lincRNA	KNOWN	GS1-304P7.3	1	1	0.072756
chr1	186578279	186579299	186578789	ENSG00000228238.1	+	processed_pseudogene	KNOWN	GS1-304P7.2	1	1	-0.317399
chr1	186580515	186581191	186580853	ENSG00000233196.2	-	processed_pseudogene	KNOWN	GS1-304P7.1	1	1	-0.317399
chr1	186586187	186586269	186586228	ENSG00000275000.1	+	miRNA	NOVEL	AL096803.1	1	1	-0.317399
chr1	186671791	186680427	186676109	ENSG00000073756.11	-	protein_coding	KNOWN	PTGS2	5	10	-0.197515
chr1	186680622	186681446	186681034	ENSG00000273129.1	+	lincRNA	KNOWN	PACERR	1	1	-0.197515
chr1	186828953	186988981	186908967	ENSG00000116711.9	+	protein_coding	KNOWN	PLA2G4A	2	18	-0.476253
chr1	187092842	187360323	187226582	ENSG00000236030.1	+	lincRNA	KNOWN	LINC01036	1	4	-0.663055
chr1	187443606	187477222	187460414	ENSG00000231599.1	+	lincRNA	KNOWN	LINC01037	2	3	-0.627991
chr1	187480293	187480614	187480453	ENSG00000272827.1	+	lincRNA	KNOWN	RP11-445P19.3	1	1	-0.664451
chr1	187506838	187507119	187506978	ENSG00000271558.1	-	processed_pseudogene	KNOWN	RP11-445P19.2	1	2	-0.440676
chr1	187563061	187564131	187563596	ENSG00000225462.1	+	processed_pseudogene	KNOWN	FDPSP1	1	1	-0.675031
chr1	187632166	187632439	187632302	ENSG00000274702.1	+	processed_pseudogene	KNOWN	RP11-393M18.5	1	1	-0.450535
chr1	187641226	187643860	187642543	ENSG00000230426.2	+	lincRNA	KNOWN	ERVMER61-1	2	3	-0.450535
chr1	187706561	187708898	187707729	ENSG00000236401.1	+	unprocessed_pseudogene	KNOWN	SLC4A1APP2	1	3	-0.522718
chr1	187714243	187714735	187714489	ENSG00000223847.1	-	processed_pseudogene	KNOWN	RP5-925F19.1	1	1	-0.306172
chr1	188067298	188067525	188067411	ENSG00000150732.8	-	processed_pseudogene	KNOWN	RP11-134C1.1	1	1	-0.514666
chr1	188155839	188156180	188156009	ENSG00000222240.1	-	misc_RNA	KNOWN	RN7SKP156	1	1	-0.962456
chr1	188218400	188220676	188219538	ENSG00000261182.1	+	lincRNA	KNOWN	RP11-201A3.1	1	1	-1.041864
chr1	188242139	188242678	188242408	ENSG00000224278.1	-	processed_pseudogene	KNOWN	RP11-405P11.1	1	1	-0.508401
chr1	188508538	188536465	188522501	ENSG00000225006.1	+	lincRNA	KNOWN	RP11-669M2.1	1	4	-0.646010
chr1	188671353	188671759	188671556	ENSG00000235083.1	+	processed_pseudogene	KNOWN	RP11-669M2.2	1	1	-0.685616
chr1	188694320	188695111	188694715	ENSG00000231022.1	+	processed_pseudogene	KNOWN	RPS3AP9	1	1	-0.657200
chr1	188705623	188710880	188708251	ENSG00000237283.1	-	lincRNA	KNOWN	RP11-316I3.1	1	2	-0.587258
chr1	188869477	188887434	188878455	ENSG00000238054.1	-	lincRNA	KNOWN	RP11-316I3.2	1	2	-0.851727
chr1	188905688	189037262	188971475	ENSG00000226486.1	+	lincRNA	KNOWN	LINC01035	1	2	-0.674057
chr1	189035961	189036444	189036202	ENSG00000271036.1	-	processed_pseudogene	KNOWN	CLPTM1LP1	1	1	-0.405508
chr1	189132350	189133292	189132821	ENSG00000226196.1	-	processed_pseudogene	KNOWN	GAPDHP75	1	1	-0.551864
chr1	189666149	189666256	189666202	ENSG00000252553.1	-	rRNA	KNOWN	RNA5SP73	1	1	-0.881697
chr1	189775465	189814918	189795191	ENSG00000232212.1	+	lincRNA	KNOWN	RP11-398M15.1	1	4	-0.767359
chr1	189868001	189868528	189868264	ENSG00000238270.1	-	lincRNA	KNOWN	RP11-445J9.1	1	2	-0.988179
chr1	189989570	189993097	189991333	ENSG00000230987.2	-	processed_pseudogene	KNOWN	RP11-113I24.1	1	1	-0.504536
chr1	190097662	190478404	190288033	ENSG00000162670.10	-	protein_coding	KNOWN	BRINP3	5	8	-0.790750
chr1	190264898	190362270	190313584	ENSG00000225811.1	+	antisense	KNOWN	RP11-547I7.1	1	5	-0.807174
chr1	190478551	190480735	190479643	ENSG00000237457.6	+	lincRNA	KNOWN	LINC01351	2	2	-0.614277
chr1	190480379	190494297	190487338	ENSG00000241505.1	+	lincRNA	KNOWN	RP11-161I10.1	1	2	-0.575426
chr1	190624890	190801658	190713274	ENSG00000231175.1	+	lincRNA	KNOWN	RP11-463J7.2	1	5	-0.805675
chr1	190781787	190781995	190781891	ENSG00000236025.1	+	processed_pseudogene	KNOWN	RP11-463J7.1	1	1	-0.848302
chr1	190797524	190797956	190797740	ENSG00000238108.1	+	processed_pseudogene	KNOWN	RP11-463J7.3	1	1	-0.675347
chr1	191146025	191146961	191146493	ENSG00000228020.2	-	processed_pseudogene	KNOWN	HNRNPA1P46	1	1	-0.701557
chr1	191151510	191154634	191153072	ENSG00000261642.1	+	lincRNA	KNOWN	RP11-309H21.3	1	1	-0.669069
chr1	191179521	191179739	191179630	ENSG00000271187.1	-	processed_pseudogene	KNOWN	RP11-309H21.4	1	1	-0.852867
chr1	191221159	191228467	191224813	ENSG00000233882.2	-	lincRNA	KNOWN	RP11-309H21.2	1	2	-0.731758
chr1	191858707	191890229	191874468	ENSG00000223344.1	-	lincRNA	KNOWN	RP11-541F9.1	2	2	-0.885445
chr1	191875495	192011260	191943377	ENSG00000228215.2	+	lincRNA	KNOWN	RP11-541F9.2	1	6	-0.776777
chr1	192158457	192185815	192172136	ENSG00000150681.9	+	protein_coding	KNOWN	RGS18	4	6	-0.557514
chr1	192246708	192247487	192247097	ENSG00000226723.2	-	processed_pseudogene	KNOWN	RP11-142L4.3	1	1	-0.573272
chr1	192247505	192247947	192247726	ENSG00000236792.1	+	processed_pseudogene	KNOWN	RP11-142L4.2	1	1	-0.573272
chr1	192316992	192367285	192342138	ENSG00000253148.1	+	protein_coding	KNOWN	RGS21	1	5	-0.852334
chr1	192517639	192567217	192542428	ENSG00000232498.1	-	antisense	KNOWN	RP5-1011O1.2	1	2	-0.268432
chr1	192529579	192538102	192533840	ENSG00000236069.1	+	lincRNA	KNOWN	RP5-1011O1.3	1	3	-0.288198
chr1	192575727	192580031	192577879	ENSG00000090104.11	+	protein_coding	KNOWN	RGS1	6	5	-0.313647
chr1	192636138	192660306	192648222	ENSG00000127074.14	+	protein_coding	KNOWN	RGS13	4	7	-0.536074
chr1	192716183	192716648	192716415	ENSG00000231767.3	+	processed_pseudogene	KNOWN	RP11-92K2.2	1	1	-0.162727
chr1	192796533	192797205	192796869	ENSG00000228687.1	+	unprocessed_pseudogene	KNOWN	RP3-419C19.3	1	2	-0.090385
chr1	192800571	192801141	192800856	ENSG00000226814.2	+	processed_pseudogene	KNOWN	RP3-419C19.2	1	1	-0.090385
chr1	192809039	192812283	192810661	ENSG00000116741.7	+	protein_coding	KNOWN	RGS2	4	5	-0.225825
chr1	192875686	192875985	192875835	ENSG00000223075.1	-	misc_RNA	KNOWN	RN7SKP126	1	1	-0.515339
chr1	192937300	192948257	192942778	ENSG00000234871.1	-	lincRNA	KNOWN	LINC01032	1	2	-0.298593
chr1	192993449	192994677	192994063	ENSG00000234473.1	-	processed_pseudogene	KNOWN	ZNF101P2	1	1	0.008576
chr1	193012250	193060080	193036165	ENSG00000116750.13	-	protein_coding	KNOWN	UCHL5	13	12	-0.320654
chr1	193057281	193057415	193057348	ENSG00000238754.1	-	snoRNA	NOVEL	snoU109	1	1	-0.344579
chr1	193059422	193091777	193075599	ENSG00000116747.12	+	protein_coding	KNOWN	TROVE2	12	11	-0.329581
chr1	193090866	193091556	193091211	ENSG00000272579.1	-	antisense	KNOWN	RP11-101E13.5	1	1	-0.528816
chr1	193096468	193106114	193101291	ENSG00000023572.8	-	protein_coding	KNOWN	GLRX2	3	4	-0.528816
chr1	193122017	193253901	193187959	ENSG00000134371.9	+	protein_coding	KNOWN	CDC73	3	17	-0.253776
chr1	193136503	193136583	193136543	ENSG00000221680.1	+	miRNA	KNOWN	MIR1278	1	1	-0.288151
chr1	193179045	193186654	193182849	ENSG00000162630.5	-	protein_coding	KNOWN	B3GALT2	1	2	-0.159141
chr1	193236794	193237107	193236950	ENSG00000276735.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.591535
chr1	193304745	193365953	193335349	ENSG00000232077.1	+	lincRNA	KNOWN	LINC01031	1	4	-0.249683
chr1	193678894	193727035	193702964	ENSG00000226640.2	+	lincRNA	KNOWN	RP11-21J7.1	1	3	-0.357434
chr1	193684246	193688429	193686337	ENSG00000237011.1	-	lincRNA	KNOWN	RP11-98G13.1	1	3	-0.176711
chr1	193756815	193757267	193757041	ENSG00000237213.2	-	processed_pseudogene	KNOWN	RPL23AP22	1	1	-0.638401
chr1	194089422	194089520	194089471	ENSG00000275233.1	-	miRNA	NOVEL	AL136456.1	1	1	-0.570236
chr1	194149473	194198694	194174083	ENSG00000227240.1	+	lincRNA	KNOWN	RP11-563D10.1	1	3	-0.623646
chr1	194188967	194190342	194189654	ENSG00000233057.1	+	processed_pseudogene	KNOWN	EEF1A1P14	1	1	-0.532335
chr1	194350943	194352426	194351684	ENSG00000231714.1	+	lincRNA	KNOWN	RP11-476H20.1	1	2	-0.591981
chr1	194488103	194488205	194488154	ENSG00000251813.1	-	snRNA	KNOWN	RNU6-983P	1	1	-0.708399
chr1	194718795	194719236	194719015	ENSG00000228167.1	+	processed_pseudogene	KNOWN	RP11-489C13.1	1	1	-0.746545
chr1	195126681	195126776	195126728	ENSG00000265108.1	+	miRNA	NOVEL	AL357932.1	1	1	-0.848769
chr1	196044996	196061073	196053034	ENSG00000227421.1	-	lincRNA	KNOWN	RP11-476B1.1	1	2	-0.759205
chr1	196225779	196609225	196417502	ENSG00000162687.16	-	protein_coding	KNOWN	KCNT2	7	28	-0.705926
chr1	196582413	196582481	196582447	ENSG00000265986.1	-	miRNA	KNOWN	MIR4735	1	1	-0.836115
chr1	196651878	196747504	196699691	ENSG00000000971.15	+	protein_coding	KNOWN	CFH	6	22	-0.710639
chr1	196774795	196795406	196785100	ENSG00000116785.13	+	protein_coding	KNOWN	CFHR3	6	7	-0.829448
chr1	196819745	196959210	196889477	ENSG00000276911.1	+	protein_coding	KNOWN	RP4-608O15.3	1	5	-0.295965
chr1	196819757	196832189	196825973	ENSG00000244414.6	+	protein_coding	KNOWN	CFHR1	5	6	-0.051915
chr1	196850241	196918972	196884606	ENSG00000134365.12	+	protein_coding	KNOWN	CFHR4	4	10	-0.327792
chr1	196943772	196959226	196951499	ENSG00000080910.11	+	protein_coding	KNOWN	CFHR2	6	5	-0.190785
chr1	196970495	196970671	196970583	ENSG00000273844.1	+	unprocessed_pseudogene	KNOWN	RP4-608O15.4	1	1	-0.673543
chr1	196977556	197009674	196993615	ENSG00000134389.9	+	protein_coding	KNOWN	CFHR5	1	10	-0.540362
chr1	197039191	197067267	197053229	ENSG00000143278.3	-	protein_coding	KNOWN	F13B	2	12	-0.243892
chr1	197084128	197146694	197115411	ENSG00000066279.16	-	protein_coding	KNOWN	ASPM	4	28	-0.373127
chr1	197138748	197139307	197139027	ENSG00000235748.1	-	processed_pseudogene	KNOWN	SEPT14P12	1	1	-0.377493
chr1	197153680	197200542	197177111	ENSG00000177888.7	-	protein_coding	KNOWN	ZBTB41	2	11	-0.386458
chr1	197222222	197223255	197222738	ENSG00000237861.1	+	processed_pseudogene	KNOWN	RP11-332L8.1	1	1	-0.174654
chr1	197268204	197478455	197373329	ENSG00000134376.14	+	protein_coding	KNOWN	CRB1	10	13	-0.570633
chr1	197363817	197364078	197363947	ENSG00000221879.3	+	processed_pseudogene	KNOWN	MRPS21P3	1	1	-0.291712
chr1	197437976	197447469	197442722	ENSG00000230260.1	-	antisense	KNOWN	RP11-75C23.1	1	4	-0.892578
chr1	197504748	197775696	197640222	ENSG00000213047.11	-	protein_coding	KNOWN	DENND1B	12	23	-0.443340
chr1	197685640	197685740	197685690	ENSG00000207139.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.745737
chr1	197688760	197690627	197689693	ENSG00000213046.4	+	unprocessed_pseudogene	KNOWN	EEF1A1P32	1	3	-0.756572
chr1	197735636	197736107	197735871	ENSG00000235582.2	+	processed_pseudogene	KNOWN	RP11-448G4.2	1	1	-0.968762
chr1	197746751	197747451	197747101	ENSG00000233040.2	-	processed_pseudogene	KNOWN	FAM204BP	1	1	-0.968762
chr1	197757319	197761965	197759642	ENSG00000224901.1	+	antisense	KNOWN	RP11-448G4.4	1	2	0.045895
chr1	197902647	197907367	197905007	ENSG00000203724.10	+	protein_coding	KNOWN	C1orf53	3	3	-0.036995
chr1	197911902	197935478	197923690	ENSG00000143355.15	+	protein_coding	KNOWN	LHX9	8	6	0.161390
chr1	198156963	198322420	198239691	ENSG00000151414.14	+	protein_coding	KNOWN	NEK7	8	10	-0.161485
chr1	198197779	198198186	198197982	ENSG00000232824.1	-	processed_pseudogene	KNOWN	PRR13P1	1	1	-0.258107
chr1	198369297	198369385	198369341	ENSG00000252731.2	+	miRNA	NOVEL	AC093419.1	1	1	-0.350952
chr1	198523222	198540945	198532083	ENSG00000151418.11	-	protein_coding	KNOWN	ATP6V1G3	4	5	-0.325577
chr1	198597724	198598868	198598296	ENSG00000223881.1	-	lincRNA	KNOWN	RP11-553K8.2	1	2	-0.434077
chr1	198638671	198757283	198697977	ENSG00000081237.18	+	protein_coding	KNOWN	PTPRC	14	33	-0.626177
chr1	198657553	198667061	198662307	ENSG00000261573.1	-	antisense	KNOWN	RP11-553K8.5	1	3	-0.812660
chr1	198679139	198680033	198679586	ENSG00000236278.2	-	processed_pseudogene	KNOWN	PEBP1P3	1	2	-0.172905
chr1	198807493	198937429	198872461	ENSG00000229989.3	-	lincRNA	KNOWN	MIR181A1HG	3	3	-0.312611
chr1	198858873	198858982	198858927	ENSG00000207975.1	-	miRNA	KNOWN	MIR181B1	1	1	-0.323046
chr1	198859044	198859153	198859098	ENSG00000207759.1	-	miRNA	KNOWN	MIR181A1	1	1	-0.323046
chr1	198949016	198949805	198949410	ENSG00000227747.2	+	processed_pseudogene	KNOWN	RP11-16L9.1	1	1	-0.303937
chr1	198983321	198985400	198984360	ENSG00000225172.5	+	lincRNA	KNOWN	RP11-16L9.2	2	3	-0.332761
chr1	199006040	199021037	199013538	ENSG00000233410.1	-	lincRNA	KNOWN	LINC01222	1	3	-0.443806
chr1	199016133	199076735	199046434	ENSG00000235492.1	+	lincRNA	KNOWN	LINC01221	1	3	-0.501567
chr1	199148598	199393307	199270952	ENSG00000231718.1	+	lincRNA	KNOWN	RP11-382E9.1	1	4	-0.562243
chr1	199371877	199372297	199372087	ENSG00000228190.2	+	processed_pseudogene	KNOWN	RPL23AP16	1	1	-0.777424
chr1	199387141	199388475	199387808	ENSG00000236468.1	+	processed_pseudogene	KNOWN	RP11-104D3.2	1	1	-0.777424
chr1	199615188	199615280	199615234	ENSG00000263805.1	-	miRNA	NOVEL	AL450244.1	1	1	-0.541581
chr1	199752491	199752890	199752690	ENSG00000231984.1	+	processed_pseudogene	KNOWN	RP11-2L13.1	1	1	-0.131841
chr1	199876978	199877558	199877268	ENSG00000228530.1	+	processed_pseudogene	KNOWN	RP11-567B20.1	1	2	-0.250114
chr1	199888159	199888261	199888210	ENSG00000200139.1	+	snRNA	KNOWN	RNU6-778P	1	1	-0.250114
chr1	199908921	199909648	199909284	ENSG00000229747.1	+	processed_pseudogene	KNOWN	RP11-567B20.2	1	1	-0.295565
chr1	200008505	200008607	200008556	ENSG00000202491.1	-	snRNA	KNOWN	RNU6-716P	1	1	-0.225623
chr1	200014689	200014795	200014742	ENSG00000202329.1	-	snRNA	KNOWN	RNU6-609P	1	1	0.263037
chr1	200027602	200177424	200102513	ENSG00000116833.13	+	protein_coding	KNOWN	NR5A2	6	8	-0.091943
chr1	200054061	200054165	200054113	ENSG00000252860.1	+	snRNA	KNOWN	RNU6-570P	1	1	-0.197515
chr1	200144834	200144935	200144884	ENSG00000221403.1	+	miRNA	NOVEL	AC096633.1	1	1	-0.032815
chr1	200147531	200148279	200147905	ENSG00000229220.1	-	processed_pseudogene	KNOWN	RP11-47A17.2	1	1	-0.032815
chr1	200197913	200198016	200197964	ENSG00000281125.1	+	miRNA	NOVEL	AL590126.1	1	1	0.140355
chr1	200213678	200214322	200214000	ENSG00000233827.2	+	processed_pseudogene	KNOWN	FAM58BP	1	1	-0.030865
chr1	200315435	200315967	200315701	ENSG00000273093.1	-	lincRNA	KNOWN	RP11-532L16.3	1	1	0.199476
chr1	200329161	200329677	200329419	ENSG00000213045.3	+	processed_pseudogene	KNOWN	RP11-532L16.1	1	1	0.199476
chr1	200342544	200374354	200358449	ENSG00000203721.5	-	lincRNA	KNOWN	LINC00862	2	5	0.307280
chr1	200404940	200410056	200407498	ENSG00000162702.7	-	protein_coding	KNOWN	ZNF281	3	3	0.181860
chr1	200411800	200478293	200445046	ENSG00000230623.3	+	lincRNA	KNOWN	RP11-469A15.2	3	2	0.067455
chr1	200478020	200483604	200480812	ENSG00000282849.1	-	lincRNA	KNOWN	RP11-121P12.1	1	2	-0.069000
chr1	200551497	200620734	200586115	ENSG00000118193.11	-	protein_coding	KNOWN	KIF14	2	30	-0.249827
chr1	200623896	200669969	200646932	ENSG00000118197.13	-	protein_coding	KNOWN	DDX59	8	8	0.003166
chr1	200669507	200694250	200681878	ENSG00000260088.1	+	lincRNA	KNOWN	RP11-92G12.3	1	3	-0.278703
chr1	200739558	200860704	200800131	ENSG00000118200.14	+	protein_coding	KNOWN	CAMSAP2	6	18	-0.033459
chr1	200863808	200864152	200863980	ENSG00000231333.2	+	processed_pseudogene	KNOWN	RPL34P6	1	1	-0.211200
chr1	200873038	200874123	200873580	ENSG00000170128.3	+	protein_coding	KNOWN	GPR25	1	1	0.240514
chr1	200891048	200915735	200903391	ENSG00000163362.10	+	protein_coding	KNOWN	C1orf106	7	10	0.573479
chr1	200920994	200966530	200943762	ENSG00000233217.1	+	unitary_pseudogene	KNOWN	MROH3P	1	18	0.215474
chr1	200933345	200933447	200933396	ENSG00000201032.1	-	snRNA	KNOWN	RNU6-704P	1	1	-0.064978
chr1	200969390	201023700	200996545	ENSG00000116852.14	-	protein_coding	KNOWN	KIF21B	5	35	0.297686
chr1	201023949	201028792	201026370	ENSG00000229191.1	+	antisense	KNOWN	RP11-168O16.1	2	2	0.333000
chr1	201031136	201043073	201037104	ENSG00000234132.2	+	antisense	KNOWN	RP11-168O16.2	2	4	0.733097
chr1	201039512	201112566	201076039	ENSG00000081248.10	-	protein_coding	KNOWN	CACNA1S	2	44	0.348800
chr1	201113953	201127184	201120568	ENSG00000232237.3	-	protein_coding	KNOWN	ASCL5	2	2	0.246438
chr1	201134772	201171574	201153173	ENSG00000116857.16	-	protein_coding	KNOWN	TMEM9	11	6	0.603242
chr1	201190825	201228952	201209888	ENSG00000163395.16	+	protein_coding	KNOWN	IGFN1	6	26	0.380726
chr1	201222113	201223123	201222618	ENSG00000229821.1	-	antisense	KNOWN	RP11-567E21.3	1	2	0.628818
chr1	201283452	201332993	201308222	ENSG00000081277.11	+	protein_coding	KNOWN	PKP1	6	17	0.285196
chr1	201359008	201377762	201368385	ENSG00000118194.18	-	protein_coding	KNOWN	TNNT2	25	16	0.355001
chr1	201373244	201399915	201386579	ENSG00000159166.13	-	protein_coding	KNOWN	LAD1	8	10	0.565213
chr1	201399633	201401190	201400411	ENSG00000282221.1	+	antisense	KNOWN	RP11-27G14.4	1	2	0.682348
chr1	201403768	201429866	201416817	ENSG00000159173.18	-	protein_coding	KNOWN	TNNI1	7	12	0.292614
chr1	201428975	201429361	201429168	ENSG00000227048.2	+	processed_pseudogene	KNOWN	RP11-134G8.2	1	1	0.170380
chr1	201464383	201465146	201464764	ENSG00000224818.1	-	3prime_overlapping_ncrna	KNOWN	RP11-134G8.10	1	2	0.345997
chr1	201464383	201469237	201466810	ENSG00000174307.6	-	protein_coding	KNOWN	PHLDA3	4	3	0.345997
chr1	201483530	201509456	201496493	ENSG00000159176.13	-	protein_coding	KNOWN	CSRP1	19	7	0.657277
chr1	201507241	201534784	201521012	ENSG00000224536.2	+	antisense	KNOWN	RP11-134G8.7	1	2	0.757354
chr1	201518703	201530474	201524588	ENSG00000223396.2	+	lincRNA	KNOWN	RP11-134G8.5	1	2	0.827519
chr1	201520056	201520549	201520302	ENSG00000242150.2	+	transcribed_processed_pseudogene	KNOWN	RP11-134G8.6	1	1	0.842714
chr1	201622885	201826969	201724927	ENSG00000134369.15	+	protein_coding	KNOWN	NAV1	10	30	0.509998
chr1	201673105	201674144	201673624	ENSG00000236390.1	-	antisense	KNOWN	RP11-25B7.1	1	2	0.676954
chr1	201688259	201829559	201758909	ENSG00000231871.5	-	antisense	KNOWN	IPO9-AS1	3	3	0.461389
chr1	201719508	201719627	201719567	ENSG00000264802.1	+	miRNA	KNOWN	MIR5191	1	1	0.561477
chr1	201723294	201737506	201730400	ENSG00000235121.1	-	antisense	KNOWN	RP11-90L20.2	1	2	0.601006
chr1	201733406	201733505	201733455	ENSG00000200942.1	+	snRNA	KNOWN	RNU6-501P	1	1	0.636312
chr1	201808611	201808702	201808656	ENSG00000221028.1	+	miRNA	KNOWN	MIR1231	1	1	0.423198
chr1	201829141	201884294	201856717	ENSG00000198700.9	+	protein_coding	KNOWN	IPO9	4	24	0.313507
chr1	201863373	201863447	201863410	ENSG00000277681.1	+	miRNA	KNOWN	MIR6739	1	1	0.121893
chr1	201888680	201892306	201890493	ENSG00000198892.6	+	protein_coding	KNOWN	SHISA4	3	5	0.788197
chr1	201893842	201899978	201896910	ENSG00000223774.5	+	antisense	KNOWN	RP11-307B6.3	2	3	1.024878
chr1	201896452	201946588	201921520	ENSG00000163431.12	-	protein_coding	KNOWN	LMOD1	2	4	0.670559
chr1	201921644	201921736	201921690	ENSG00000278750.1	-	miRNA	NOVEL	AC099676.1	1	1	0.679369
chr1	201955491	201970661	201963076	ENSG00000134375.10	+	protein_coding	KNOWN	TIMM17A	4	7	0.453593
chr1	201978461	201978595	201978528	ENSG00000206637.1	+	snoRNA	NOVEL	SNORA70	1	1	0.029595
chr1	201978642	201978949	201978795	ENSG00000238003.1	+	processed_pseudogene	KNOWN	RP11-465N4.2	1	1	0.029595
chr1	201982372	202006147	201994259	ENSG00000176393.10	+	protein_coding	KNOWN	RNPEP	14	11	0.458688
chr1	201995696	201996352	201996024	ENSG00000273478.1	-	antisense	KNOWN	RP11-465N4.5	1	1	0.661357
chr1	202000094	202010353	202005223	ENSG00000234678.1	-	antisense	KNOWN	RP11-465N4.4	2	2	0.663415
chr1	202003124	202003236	202003180	ENSG00000275207.1	+	miRNA	KNOWN	MIR6740	1	1	0.661357
chr1	202007945	202017188	202012566	ENSG00000163435.15	+	protein_coding	KNOWN	ELF3	10	9	0.707753
chr1	202011370	202015657	202013513	ENSG00000249007.1	+	sense_intronic	KNOWN	RP11-510N19.5	1	2	0.721009
chr1	202028606	202028692	202028649	ENSG00000232296.1	+	processed_pseudogene	KNOWN	RP11-510N19.2	1	1	0.721009
chr1	202039851	202039934	202039892	ENSG00000235811.1	+	processed_pseudogene	KNOWN	RP11-510N19.3	1	1	0.529397
chr1	202070841	202070943	202070892	ENSG00000212512.2	+	misc_RNA	NOVEL	Y_RNA	1	1	0.568430
chr1	202096759	202096978	202096868	ENSG00000227109.1	+	processed_pseudogene	KNOWN	CRIP1P3	1	1	0.378463
chr1	202122858	202133592	202128225	ENSG00000170075.8	+	protein_coding	KNOWN	GPR37L1	1	2	0.536020
chr1	202133404	202144743	202139073	ENSG00000143862.7	-	protein_coding	KNOWN	ARL8A	4	7	0.437767
chr1	202147013	202161588	202154300	ENSG00000143851.15	-	protein_coding	KNOWN	PTPN7	19	11	0.532476
chr1	202168051	202189455	202178753	ENSG00000243323.5	+	unitary_pseudogene	KNOWN	PTPRVP	3	29	0.793155
chr1	202193901	202319781	202256841	ENSG00000133067.17	+	protein_coding	KNOWN	LGR6	8	18	0.452926
chr1	202331657	202341980	202336818	ENSG00000077152.9	-	protein_coding	KNOWN	UBE2T	3	7	0.478460
chr1	202348699	202592706	202470702	ENSG00000077157.21	+	protein_coding	KNOWN	PPP1R12B	18	25	0.054204
chr1	202369526	202370145	202369835	ENSG00000229120.2	-	processed_pseudogene	KNOWN	CYCSP4	1	2	0.205141
chr1	202410108	202410207	202410157	ENSG00000272262.1	-	snRNA	KNOWN	RNU6-89P	1	1	-0.212863
chr1	202438396	202439957	202439176	ENSG00000232626.3	+	transcribed_processed_pseudogene	KNOWN	RP11-175B9.2	2	1	0.169160
chr1	202471864	202472117	202471990	ENSG00000236439.4	-	processed_pseudogene	KNOWN	RP11-175B9.3	1	1	-0.222117
chr1	202527310	202527427	202527368	ENSG00000253042.1	-	snoRNA	NOVEL	SNORA70	1	1	-0.181027
chr1	202590596	202710417	202650506	ENSG00000143858.11	-	protein_coding	KNOWN	SYT2	2	9	0.436702
chr1	202604268	202605293	202604780	ENSG00000226862.1	+	antisense	KNOWN	RP11-569A11.1	1	2	0.472096
chr1	202632428	202632911	202632669	ENSG00000225620.1	+	lincRNA	KNOWN	RP11-569A11.2	1	2	0.478174
chr1	202724491	202809470	202766980	ENSG00000117139.16	-	protein_coding	KNOWN	KDM5B	10	28	0.286842
chr1	202767229	202767418	202767323	ENSG00000235449.2	-	processed_pseudogene	KNOWN	RP11-480I12.2	1	1	0.245615
chr1	202796030	202797094	202796562	ENSG00000226148.1	+	processed_pseudogene	KNOWN	SLC25A39P1	1	1	0.419718
chr1	202810238	202810829	202810533	ENSG00000260021.1	-	antisense	KNOWN	RP11-480I12.10	1	1	0.386897
chr1	202810954	202812156	202811555	ENSG00000228288.6	+	antisense	KNOWN	PCAT6	3	2	0.386897
chr1	202820266	202827225	202823745	ENSG00000184774.8	+	transcribed_unitary_pseudogene	KNOWN	MGAT4EP	2	3	0.386897
chr1	202851828	202861620	202856724	ENSG00000214796.8	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-480I12.5	4	4	0.730655
chr1	202861754	202875241	202868497	ENSG00000234996.4	+	transcribed_processed_pseudogene	KNOWN	RP11-480I12.9	2	3	0.639368
chr1	202878957	202889135	202884046	ENSG00000183155.4	-	protein_coding	KNOWN	RABIF	1	2	0.495785
chr1	202891100	202928636	202909868	ENSG00000117153.15	-	protein_coding	KNOWN	KLHL12	3	12	0.278779
chr1	202911812	202912729	202912270	ENSG00000230280.2	+	processed_pseudogene	KNOWN	HNRNPA1P59	1	1	0.368405
chr1	202914880	202914980	202914930	ENSG00000199471.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.368405
chr1	202940823	202958572	202949697	ENSG00000159346.12	-	protein_coding	KNOWN	ADIPOR1	5	8	0.330333
chr1	202961869	202967280	202964574	ENSG00000159348.12	-	protein_coding	KNOWN	CYB5R1	7	9	0.602788
chr1	202986557	202988582	202987569	ENSG00000234761.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-38O14.5	2	2	0.554211
chr1	202999738	203000352	203000045	ENSG00000231547.1	+	unprocessed_pseudogene	KNOWN	RP11-38O14.6	1	2	0.062697
chr1	203007386	203024848	203016117	ENSG00000163444.11	+	protein_coding	KNOWN	TMEM183A	5	8	0.273643
chr1	203026498	203078740	203052619	ENSG00000143847.15	+	protein_coding	KNOWN	PPFIA4	13	35	0.505042
chr1	203083132	203086036	203084584	ENSG00000122180.4	-	protein_coding	KNOWN	MYOG	1	3	0.552833
chr1	203090654	203167405	203129029	ENSG00000163485.15	+	protein_coding	KNOWN	ADORA1	8	6	0.507244
chr1	203127259	203127954	203127606	ENSG00000234775.1	-	antisense	KNOWN	RP11-335O13.7	1	2	0.576025
chr1	203144694	203152579	203148636	ENSG00000224671.2	-	antisense	KNOWN	RP11-335O13.8	1	4	0.511219
chr1	203167811	203175813	203171812	ENSG00000133055.8	-	protein_coding	KNOWN	MYBPH	2	13	0.672128
chr1	203178931	203186749	203182840	ENSG00000133048.12	-	protein_coding	KNOWN	CHI3L1	5	10	0.733538
chr1	203212827	203273641	203243234	ENSG00000133063.15	-	protein_coding	KNOWN	CHIT1	9	13	0.389542
chr1	203255743	203256475	203256109	ENSG00000236523.2	+	processed_pseudogene	KNOWN	NPM1P40	1	1	0.384173
chr1	203287152	203288801	203287976	ENSG00000231507.1	+	lincRNA	KNOWN	LINC01353	2	3	0.500903
chr1	203298758	203305309	203302033	ENSG00000233791.5	-	lincRNA	KNOWN	LINC01136	3	3	0.330152
chr1	203305491	203309602	203307546	ENSG00000159388.5	+	protein_coding	KNOWN	BTG2	2	3	0.330152
chr1	203318996	203319099	203319047	ENSG00000202300.1	-	snRNA	KNOWN	RNU6-487P	1	1	0.519002
chr1	203340628	203351489	203346058	ENSG00000122176.10	-	protein_coding	KNOWN	FMOD	3	3	0.337836
chr1	203353365	203353651	203353508	ENSG00000229652.1	-	processed_pseudogene	KNOWN	RP11-435P24.2	1	1	0.268581
chr1	203400266	203400581	203400423	ENSG00000271588.1	-	processed_pseudogene	KNOWN	LARP7P1	1	1	-0.203136
chr1	203475828	203491352	203483590	ENSG00000188783.5	+	protein_coding	KNOWN	PRELP	1	3	0.487091
chr1	203494143	203508864	203501503	ENSG00000188770.9	+	protein_coding	KNOWN	OPTC	2	8	0.571682
chr1	203626561	203744081	203685321	ENSG00000058668.14	+	protein_coding	KNOWN	ATP2B4	7	22	0.512897
chr1	203656969	203657760	203657364	ENSG00000236035.2	-	processed_pseudogene	KNOWN	RP11-90O23.1	1	1	0.519002
chr1	203729581	203729705	203729643	ENSG00000221643.1	+	snoRNA	KNOWN	SNORA77	1	1	0.311394
chr1	203765176	203776233	203770704	ENSG00000122188.12	+	protein_coding	KNOWN	LAX1	3	5	0.321569
chr1	203795654	203854124	203824889	ENSG00000058673.15	+	protein_coding	KNOWN	ZC3H11A	13	20	0.240683
chr1	203796309	203800558	203798433	ENSG00000257315.1	+	protein_coding	KNOWN	ZBED6	1	1	0.456564
chr1	203805621	203806263	203805942	ENSG00000227417.3	-	processed_pseudogene	KNOWN	RP11-397P13.6	1	1	0.456564
chr1	203835585	203835912	203835748	ENSG00000223505.2	-	processed_pseudogene	KNOWN	RP11-397P13.7	1	1	0.267310
chr1	203861603	203870550	203866076	ENSG00000182004.12	+	protein_coding	KNOWN	SNRPE	6	5	0.023290
chr1	203872574	203874187	203873380	ENSG00000236430.1	-	processed_pseudogene	KNOWN	KRT8P29	1	2	0.316552
chr1	203903723	203904013	203903868	ENSG00000232917.5	-	processed_pseudogene	KNOWN	HSPE1P6	1	1	-0.011102
chr1	203954640	203955780	203955210	ENSG00000237379.1	+	processed_pseudogene	KNOWN	CBX1P3	1	2	0.182447
chr1	204032447	204041265	204036856	ENSG00000176754.12	-	lincRNA	KNOWN	LINC00303	3	6	0.387159
chr1	204073115	204127743	204100429	ENSG00000143842.14	+	protein_coding	KNOWN	SOX13	10	14	0.602526
chr1	204131062	204131966	204131514	ENSG00000261065.1	+	antisense	KNOWN	RP11-74C13.4	1	2	0.768047
chr1	204131062	204152003	204141532	ENSG00000143845.14	-	protein_coding	KNOWN	ETNK2	11	8	0.762707
chr1	204141408	204143009	204142208	ENSG00000230550.1	+	antisense	KNOWN	RP11-74C13.3	1	3	0.768047
chr1	204154819	204166322	204160570	ENSG00000143839.13	-	protein_coding	KNOWN	REN	1	10	0.712243
chr1	204183006	204183537	204183271	ENSG00000225522.2	+	processed_pseudogene	KNOWN	RP11-203F10.1	1	1	0.523838
chr1	204190341	204196486	204193413	ENSG00000170498.8	-	protein_coding	KNOWN	KISS1	2	3	0.486964
chr1	204198160	204214092	204206126	ENSG00000174567.7	-	protein_coding	KNOWN	GOLT1A	2	5	0.445525
chr1	204218851	204377665	204298258	ENSG00000143850.12	-	protein_coding	KNOWN	PLEKHA6	4	23	0.520234
chr1	204277005	204277948	204277476	ENSG00000231691.1	+	antisense	KNOWN	RP11-203F10.5	1	2	0.583682
chr1	204346776	204347258	204347017	ENSG00000219133.2	-	processed_pseudogene	KNOWN	RP11-203F10.6	1	1	0.959354
chr1	204368431	204369719	204369075	ENSG00000280924.1	-	lincRNA	KNOWN	LINC00628	1	1	0.332390
chr1	204377850	204435846	204406848	ENSG00000226330.1	+	antisense	KNOWN	RP11-739N20.2	1	3	0.417053
chr1	204394541	204394774	204394657	ENSG00000237848.1	+	processed_pseudogene	KNOWN	RP11-739N20.3	1	1	0.410439
chr1	204403387	204411791	204407589	ENSG00000158615.8	-	protein_coding	KNOWN	PPP1R15B	1	2	0.397244
chr1	204422628	204494724	204458676	ENSG00000133056.13	-	protein_coding	KNOWN	PIK3C2B	8	35	0.536799
chr1	204516379	204558120	204537249	ENSG00000198625.12	+	protein_coding	KNOWN	MDM4	17	12	0.199675
chr1	204528845	204529692	204529268	ENSG00000236779.1	-	processed_pseudogene	KNOWN	RP11-430C7.2	1	1	0.281710
chr1	204562413	204562521	204562467	ENSG00000200408.1	-	rRNA	KNOWN	RNA5SP74	1	1	-0.086546
chr1	204603035	204616565	204609800	ENSG00000240710.1	+	antisense	KNOWN	RP11-430C7.4	1	3	0.322214
chr1	204617170	204685733	204651451	ENSG00000170382.11	-	protein_coding	KNOWN	LRRN2	4	3	0.216415
chr1	204626775	204629712	204628243	ENSG00000240219.1	+	lincRNA	KNOWN	RP11-430C7.5	1	2	0.051540
chr1	204663872	204664613	204664242	ENSG00000228153.1	+	lincRNA	KNOWN	RP11-23I7.1	1	2	0.424068
chr1	204707320	204707430	204707375	ENSG00000252650.1	-	rRNA	KNOWN	RNA5SP75	1	1	0.047138
chr1	204727991	204728106	204728048	ENSG00000251861.1	+	scaRNA	NOVEL	SCARNA20	1	1	0.392037
chr1	204828651	205022822	204925736	ENSG00000163531.15	+	protein_coding	KNOWN	NFASC	25	30	0.125086
chr1	204946608	204947169	204946888	ENSG00000229657.2	+	processed_pseudogene	KNOWN	RP11-494K3.2	1	1	0.296923
chr1	205043197	205078499	205060848	ENSG00000184144.9	+	protein_coding	KNOWN	CNTN2	7	23	0.308328
chr1	205062252	205062342	205062297	ENSG00000251696.1	+	miRNA	NOVEL	AL583832.1	1	1	0.278808
chr1	205083129	205084460	205083794	ENSG00000174529.7	-	protein_coding	KNOWN	TMEM81	1	1	0.380822
chr1	205086142	205122015	205104078	ENSG00000117222.13	-	protein_coding	KNOWN	RBBP5	3	14	0.105694
chr1	205091163	205091946	205091554	ENSG00000271580.1	+	processed_pseudogene	KNOWN	RP11-536L3.4	1	1	0.042523
chr1	205134646	205134950	205134798	ENSG00000236108.1	+	processed_pseudogene	KNOWN	RP11-383G10.1	1	1	0.265475
chr1	205142505	205211566	205177035	ENSG00000133059.16	-	protein_coding	KNOWN	DSTYK	3	13	0.413500
chr1	205202191	205202742	205202466	ENSG00000213041.4	+	processed_pseudogene	KNOWN	RP11-383G10.3	1	1	0.419423
chr1	205228176	205273343	205250759	ENSG00000133069.14	+	protein_coding	KNOWN	TMCC2	8	5	0.498328
chr1	205233821	205236867	205235344	ENSG00000225063.1	-	antisense	KNOWN	RP11-383G10.5	1	2	0.334969
chr1	205302059	205321791	205311925	ENSG00000163545.8	-	protein_coding	KNOWN	NUAK2	1	7	0.505757
chr1	205336065	205357090	205346577	ENSG00000162873.14	-	protein_coding	KNOWN	KLHDC8A	12	9	0.542146
chr1	205351247	205351471	205351359	ENSG00000235363.1	+	processed_pseudogene	KNOWN	SNRPGP10	1	1	0.405746
chr1	205373252	205387440	205380346	ENSG00000226235.1	+	antisense	KNOWN	LEMD1-AS1	1	4	-0.085546
chr1	205381378	205457091	205419234	ENSG00000186007.9	-	protein_coding	KNOWN	LEMD1	11	6	0.039942
chr1	205434886	205437879	205436382	ENSG00000281406.1	-	lincRNA	KNOWN	BLACAT1	1	1	0.266670
chr1	205448291	205448403	205448347	ENSG00000199059.2	-	miRNA	KNOWN	MIR135B	1	1	0.266670
chr1	205455929	205469024	205462476	ENSG00000224717.1	+	lincRNA	KNOWN	RP11-576D8.4	1	3	0.259343
chr1	205504595	205532793	205518694	ENSG00000117266.15	+	protein_coding	KNOWN	CDK18	23	16	0.379590
chr1	205566716	205566799	205566757	ENSG00000253097.1	+	snRNA	KNOWN	RNU2-19P	1	1	0.518692
chr1	205568885	205602918	205585901	ENSG00000174514.12	+	protein_coding	KNOWN	MFSD4	11	10	0.430855
chr1	205595041	205595147	205595094	ENSG00000206762.1	+	snRNA	KNOWN	RNU6-418P	1	1	0.475320
chr1	205597556	205631962	205614759	ENSG00000158711.13	-	protein_coding	KNOWN	ELK4	5	10	0.131150
chr1	205625483	205626153	205625818	ENSG00000236942.1	+	processed_pseudogene	KNOWN	RP11-6B6.3	1	2	-0.090212
chr1	205657851	205680459	205669155	ENSG00000158715.5	-	protein_coding	KNOWN	SLC45A3	2	5	0.363856
chr1	205684018	205684307	205684162	ENSG00000275213.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.433029
chr1	205712819	205750276	205731547	ENSG00000069275.12	-	protein_coding	KNOWN	NUCKS1	2	7	0.373354
chr1	205731221	205731352	205731286	ENSG00000201944.1	-	snoRNA	NOVEL	SNORA72	1	1	0.208089
chr1	205767986	205775460	205771723	ENSG00000117280.12	-	protein_coding	KNOWN	RAB29	9	6	0.333816
chr1	205789093	205813748	205801420	ENSG00000133065.10	-	protein_coding	KNOWN	SLC41A1	4	11	0.635719
chr1	205828022	205850132	205839077	ENSG00000162877.12	-	protein_coding	KNOWN	PM20D1	4	13	0.225287
chr1	205913048	205943460	205928254	ENSG00000174502.18	-	protein_coding	KNOWN	SLC26A9	6	22	0.513221
chr1	205935128	205935768	205935448	ENSG00000227687.1	+	antisense	KNOWN	RP4-681L3.2	1	2	0.910545
chr1	205976740	206003461	205990100	ENSG00000276600.4	-	protein_coding	KNOWN	RAB7B	5	6	0.456005
chr1	206009264	206023909	206016586	ENSG00000196188.10	-	protein_coding	KNOWN	CTSE	4	9	0.307779
chr1	206024548	206024683	206024615	ENSG00000280687.1	+	miRNA	NOVEL	BX571818.1	1	1	0.300578
chr1	206037231	206102459	206069845	ENSG00000263961.6	+	protein_coding	KNOWN	C1orf186	11	6	0.242099
chr1	206080239	206080324	206080281	ENSG00000252692.1	+	snoRNA	NOVEL	SNORD60	1	1	0.302759
chr1	206109692	206117699	206113695	ENSG00000198049.6	-	protein_coding	KNOWN	AVPR1B	2	2	0.214119
chr1	206117783	206126805	206122294	ENSG00000226780.1	+	antisense	KNOWN	RP11-38J22.3	1	3	0.221922
chr1	206160887	206161276	206161081	ENSG00000225483.1	-	processed_pseudogene	KNOWN	RP11-38J22.2	1	1	0.409283
chr1	206175060	206177246	206176153	ENSG00000236889.1	-	lincRNA	KNOWN	RP11-38J22.1	1	2	0.147755
chr1	206186179	206204414	206195296	ENSG00000196550.10	-	protein_coding	KNOWN	FAM72A	8	5	0.039157
chr1	206203345	206464443	206333894	ENSG00000266028.7	+	protein_coding	KNOWN	SRGAP2	17	22	0.251301
chr1	206333327	206333438	206333382	ENSG00000229509.1	-	unprocessed_pseudogene	KNOWN	RP11-421E17.4	1	1	0.099409
chr1	206470476	206496889	206483682	ENSG00000263528.7	+	protein_coding	KNOWN	IKBKE	6	22	0.627257
chr1	206474803	206474864	206474833	ENSG00000278465.1	+	miRNA	KNOWN	MIR6769B	1	1	0.663755
chr1	206491116	206497728	206494422	ENSG00000162888.4	-	antisense	KNOWN	C1orf147	1	2	0.523838
chr1	206503948	206504456	206504202	ENSG00000261000.1	+	lincRNA	KNOWN	RP11-534L20.5	1	1	0.523838
chr1	206507530	206589283	206548406	ENSG00000266094.6	+	protein_coding	KNOWN	RASSF5	8	6	0.411782
chr1	206528915	206529706	206529310	ENSG00000234981.1	+	processed_pseudogene	KNOWN	RP11-534L20.4	1	1	0.598660
chr1	206541758	206544892	206543325	ENSG00000279946.1	+	TEC	KNOWN	CH17-76K2.6	1	1	0.148299
chr1	206571292	206612463	206591877	ENSG00000143486.15	-	protein_coding	KNOWN	EIF2D	11	15	0.575272
chr1	206634649	206635622	206635135	ENSG00000237605.1	-	antisense	KNOWN	RP11-343H5.6	1	2	0.193139
chr1	206635536	206684419	206659977	ENSG00000143479.15	+	protein_coding	KNOWN	DYRK3	5	4	0.287862
chr1	206684944	206734283	206709613	ENSG00000162889.10	+	protein_coding	KNOWN	MAPKAPK2	4	10	0.615677
chr1	206695837	206696269	206696053	ENSG00000224114.1	-	processed_pseudogene	KNOWN	RP11-343H5.4	1	1	0.487055
chr1	206747980	206748092	206748036	ENSG00000199349.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.905291
chr1	206767602	206772494	206770048	ENSG00000136634.5	-	protein_coding	KNOWN	IL10	3	5	0.287884
chr1	206798870	206842981	206820925	ENSG00000142224.15	+	protein_coding	KNOWN	IL19	4	7	0.233987
chr1	206865354	206869223	206867288	ENSG00000162891.10	+	protein_coding	KNOWN	IL20	3	6	0.323939
chr1	206897443	206904139	206900791	ENSG00000162892.15	+	protein_coding	KNOWN	IL24	7	7	0.043551
chr1	206904386	206923247	206913816	ENSG00000162894.11	-	protein_coding	KNOWN	FCMR	10	8	0.416795
chr1	206905928	206906393	206906160	ENSG00000271680.1	+	processed_pseudogene	KNOWN	RP11-564A8.8	1	1	0.043551
chr1	206907619	206908229	206907924	ENSG00000226945.1	+	processed_pseudogene	KNOWN	RP11-564A8.4	1	1	0.043551
chr1	206928518	206946466	206937492	ENSG00000162896.5	-	protein_coding	KNOWN	PIGR	3	11	0.545660
chr1	206957965	206970625	206964295	ENSG00000162897.14	-	protein_coding	KNOWN	FCAMR	7	9	0.316298
chr1	207018521	207032756	207025638	ENSG00000182795.12	-	protein_coding	KNOWN	C1orf116	2	4	0.219355
chr1	207034366	207081024	207057695	ENSG00000123836.14	+	protein_coding	KNOWN	PFKFB2	10	17	0.170991
chr1	207043849	207052980	207048414	ENSG00000180667.10	-	protein_coding	KNOWN	YOD1	2	4	0.282004
chr1	207088842	207099993	207094417	ENSG00000123843.12	+	protein_coding	KNOWN	C4BPB	8	7	-0.057011
chr1	207104262	207144972	207124617	ENSG00000123838.10	+	protein_coding	KNOWN	C4BPA	3	12	-0.233695
chr1	207127010	207127486	207127248	ENSG00000275392.1	-	antisense	KNOWN	RP11-164O23.8	1	1	-0.346378
chr1	207150205	207150281	207150243	ENSG00000226565.2	-	processed_pseudogene	KNOWN	RP11-164O23.5	1	1	-0.149826
chr1	207165496	207183910	207174703	ENSG00000224462.2	+	unprocessed_pseudogene	KNOWN	C4BPAP1	1	11	-0.228777
chr1	207179296	207184062	207181679	ENSG00000243636.1	+	lincRNA	KNOWN	RP11-164O23.7	1	4	-0.254333
chr1	207225798	207229202	207227500	ENSG00000232621.1	+	unprocessed_pseudogene	KNOWN	C4BPAP2	1	3	0.064856
chr1	207240122	207309292	207274707	ENSG00000237074.2	+	lincRNA	KNOWN	RP11-6J21.2	2	4	0.013204
chr1	207321508	207386804	207354156	ENSG00000196352.14	+	protein_coding	KNOWN	CD55	11	11	-0.102715
chr1	207372559	207373252	207372905	ENSG00000274245.1	+	lincRNA	KNOWN	RP11-357P18.2	1	1	-0.001790
chr1	207401691	207416236	207408963	ENSG00000283044.1	-	lincRNA	KNOWN	RP11-357P18.3	1	3	-0.255010
chr1	207454230	207489895	207472062	ENSG00000117322.16	+	protein_coding	KNOWN	CR2	6	20	-0.285180
chr1	207496147	207640647	207568397	ENSG00000203710.10	+	protein_coding	KNOWN	CR1	12	47	-0.259754
chr1	207551925	207606555	207579240	ENSG00000236911.6	-	antisense	KNOWN	RP11-78B10.2	4	5	-0.238815
chr1	207645113	207738416	207691764	ENSG00000197721.16	+	protein_coding	KNOWN	CR1L	5	13	-0.095891
chr1	207645234	207657410	207651322	ENSG00000244703.3	+	unprocessed_pseudogene	KNOWN	CD46P1	1	5	-0.244452
chr1	207658454	207659142	207658798	ENSG00000226289.1	+	unprocessed_pseudogene	KNOWN	CDCA4P3	1	1	-0.211558
chr1	207708898	207708981	207708939	ENSG00000274059.1	-	rRNA	NOVEL	5S_rRNA	1	1	-0.188116
chr1	207752057	207795513	207773785	ENSG00000117335.18	+	protein_coding	KNOWN	CD46	18	14	-0.200869
chr1	207762584	207763263	207762923	ENSG00000234219.1	+	unprocessed_pseudogene	KNOWN	CDCA4P4	1	1	-0.073067
chr1	207801518	207869150	207835334	ENSG00000203709.9	-	lincRNA	KNOWN	C1orf132	2	5	0.240690
chr1	207801845	207801956	207801900	ENSG00000275668.1	-	miRNA	KNOWN	MIR29C	1	1	-0.183643
chr1	207802440	207802523	207802481	ENSG00000276752.1	-	miRNA	KNOWN	MIR29B2	1	1	-0.183643
chr1	207873795	207879073	207876434	ENSG00000226202.2	-	lincRNA	KNOWN	RP11-328D5.1	1	3	0.442489
chr1	207880972	207911402	207896187	ENSG00000174059.16	-	protein_coding	KNOWN	CD34	4	8	0.219795
chr1	208022242	208244320	208133281	ENSG00000076356.6	-	protein_coding	KNOWN	PLXNA2	6	32	0.314524
chr1	208255290	208255376	208255333	ENSG00000226843.1	-	processed_pseudogene	KNOWN	RP11-2P2.1	1	1	0.127267
chr1	208607100	208612192	208609646	ENSG00000261453.1	-	lincRNA	KNOWN	RP11-565N2.1	1	2	-0.324803
chr1	208626741	208628085	208627413	ENSG00000259815.1	-	lincRNA	KNOWN	RP11-565N2.2	1	2	-0.333538
chr1	208697369	208697698	208697533	ENSG00000227887.1	-	processed_pseudogene	KNOWN	RPS26P13	1	1	-0.630023
chr1	208728688	208733184	208730936	ENSG00000232812.1	+	lincRNA	KNOWN	RP11-459K23.2	1	4	-0.356834
chr1	208972454	208975307	208973880	ENSG00000236950.1	+	lincRNA	KNOWN	RP5-1051D14.1	1	2	-0.325735
chr1	209001338	209001476	209001407	ENSG00000278684.1	+	unprocessed_pseudogene	KNOWN	RP5-1051D14.2	1	1	-0.209664
chr1	209147267	209155101	209151184	ENSG00000232537.1	-	lincRNA	KNOWN	RP11-385M4.1	1	3	-0.415889
chr1	209173014	209173375	209173194	ENSG00000228081.2	+	processed_pseudogene	KNOWN	RP11-385M4.2	1	1	-0.462597
chr1	209232196	209233419	209232807	ENSG00000224540.1	+	processed_pseudogene	KNOWN	RP11-385M4.3	1	1	-0.640075
chr1	209267798	209268223	209268010	ENSG00000225712.1	-	processed_pseudogene	KNOWN	ATP5G2P1	1	1	-0.181385
chr1	209325456	209328532	209326994	ENSG00000227940.1	+	lincRNA	KNOWN	RP11-372M18.1	1	3	-0.367440
chr1	209367662	209379690	209373676	ENSG00000231648.1	+	lincRNA	KNOWN	RP11-372M18.2	2	5	-0.185285
chr1	209428820	209432838	209430829	ENSG00000230937.9	+	processed_transcript	KNOWN	MIR205HG	10	5	0.223842
chr1	209432133	209432242	209432187	ENSG00000276335.1	+	miRNA	KNOWN	MIR205	1	1	0.216843
chr1	209528455	209567673	209548064	ENSG00000224260.6	-	lincRNA	KNOWN	RP1-272L16.1	2	7	-0.159251
chr1	209583717	209613938	209598827	ENSG00000008118.9	+	protein_coding	KNOWN	CAMK1G	4	13	0.140430
chr1	209614870	209652466	209633668	ENSG00000196878.12	-	protein_coding	KNOWN	LAMB3	5	23	0.358327
chr1	209623444	209623510	209623477	ENSG00000264831.1	-	miRNA	KNOWN	MIR4260	1	1	0.107099
chr1	209661364	209724125	209692744	ENSG00000227591.5	-	antisense	KNOWN	RP1-28O10.1	2	3	-0.199938
chr1	209675420	209676388	209675904	ENSG00000123689.5	+	protein_coding	KNOWN	G0S2	1	2	-0.210804
chr1	209686178	209734950	209710564	ENSG00000117594.9	+	protein_coding	KNOWN	HSD11B1	4	7	-0.300590
chr1	209744373	209745214	209744793	ENSG00000236136.1	+	processed_pseudogene	KNOWN	ADORA2BP1	1	1	-0.347540
chr1	209756032	209782320	209769176	ENSG00000009790.14	+	protein_coding	KNOWN	TRAF3IP3	16	17	0.135772
chr1	209779208	209784559	209781883	ENSG00000162757.4	-	protein_coding	KNOWN	C1orf74	1	2	0.202175
chr1	209785623	209806175	209795899	ENSG00000117595.10	-	protein_coding	KNOWN	IRF6	4	9	0.127597
chr1	209828007	209857565	209842786	ENSG00000117597.17	+	protein_coding	KNOWN	DIEXF	2	12	0.048700
chr1	209938174	210171315	210054744	ENSG00000143469.16	+	protein_coding	KNOWN	SYT14	7	10	-0.318691
chr1	210231456	210234047	210232751	ENSG00000203706.8	-	antisense	KNOWN	SERTAD4-AS1	3	2	0.199520
chr1	210232799	210246631	210239715	ENSG00000082497.11	+	protein_coding	KNOWN	SERTAD4	4	4	0.199520
chr1	210265636	210267241	210266438	ENSG00000228110.4	-	processed_pseudogene	KNOWN	ST13P19	1	2	0.305822
chr1	210303684	210304540	210304112	ENSG00000233455.2	+	processed_pseudogene	KNOWN	RP4-667H12.4	1	1	0.267310
chr1	210328252	210676296	210502274	ENSG00000054392.12	+	protein_coding	KNOWN	HHAT	9	12	-0.007676
chr1	210374154	210374267	210374210	ENSG00000200972.1	-	snRNA	KNOWN	RNU5A-8P	1	1	0.162765
chr1	210462345	210463012	210462678	ENSG00000270936.1	-	processed_pseudogene	KNOWN	RP5-879K22.1	1	1	0.283569
chr1	210678315	210681932	210680123	ENSG00000279333.1	+	TEC	KNOWN	RP11-75I2.3	1	1	0.180430
chr1	210678315	211134115	210906215	ENSG00000143473.11	-	protein_coding	KNOWN	KCNH1	2	11	-0.024232
chr1	210859177	210862285	210860731	ENSG00000224668.1	-	processed_pseudogene	KNOWN	IPO8P1	1	1	-0.325676
chr1	211132588	211133374	211132981	ENSG00000234233.1	-	sense_intronic	KNOWN	KCNH1-IT1	1	2	0.034767
chr1	211173488	211173849	211173668	ENSG00000234004.4	+	processed_pseudogene	KNOWN	RP11-543B16.1	1	1	-0.373300
chr1	211182156	211183104	211182630	ENSG00000223562.1	-	lincRNA	KNOWN	RP11-543B16.3	1	2	-0.373300
chr1	211207239	211207897	211207568	ENSG00000226986.4	+	processed_pseudogene	KNOWN	RP11-543B16.2	1	1	-0.263273
chr1	211210989	211211082	211211035	ENSG00000221488.1	-	miRNA	NOVEL	AC092017.1	1	1	-0.126188
chr1	211258377	211316385	211287381	ENSG00000117625.13	+	protein_coding	KNOWN	RCOR3	16	13	-0.050098
chr1	211326615	211374946	211350780	ENSG00000082512.14	+	protein_coding	KNOWN	TRAF5	7	11	0.182399
chr1	211382803	211435333	211409068	ENSG00000153363.12	+	lincRNA	KNOWN	LINC00467	4	6	-0.065912
chr1	211417025	211417934	211417479	ENSG00000236809.2	+	unprocessed_pseudogene	KNOWN	SNX25P1	1	2	-0.136036
chr1	211442274	211442806	211442540	ENSG00000238137.2	+	processed_pseudogene	KNOWN	ARPC3P2	1	1	-0.329965
chr1	211476522	211492917	211484719	ENSG00000198570.5	-	protein_coding	KNOWN	RD3	2	3	0.507029
chr1	211492255	211492917	211492586	ENSG00000223649.1	+	lincRNA	KNOWN	RP11-359E8.3	1	2	0.507029
chr1	211571568	211578742	211575155	ENSG00000170385.9	-	protein_coding	KNOWN	SLC30A1	1	2	-0.009453
chr1	211583015	211583725	211583370	ENSG00000261314.1	-	sense_overlapping	KNOWN	RP11-359E8.5	1	1	-0.009453
chr1	211635906	211642867	211639386	ENSG00000228792.2	-	lincRNA	KNOWN	RP11-354K1.2	1	2	0.261011
chr1	211639695	211654581	211647138	ENSG00000227764.1	+	lincRNA	KNOWN	RP11-354K1.1	2	3	0.169122
chr1	211653456	211653549	211653502	ENSG00000222080.1	-	miRNA	NOVEL	AL356310.1	1	1	-0.037519
chr1	211658657	211675630	211667143	ENSG00000117650.12	-	protein_coding	KNOWN	NEK2	5	8	-0.067356
chr1	211660189	211661277	211660733	ENSG00000224763.1	-	processed_pseudogene	KNOWN	FDPSP8	1	1	-0.037519
chr1	211675762	211690103	211682932	ENSG00000231057.3	+	antisense	KNOWN	RP11-122M14.1	3	6	-0.125038
chr1	211715928	211725402	211720665	ENSG00000226868.1	-	lincRNA	KNOWN	RP11-122M14.3	1	2	-0.055439
chr1	211743457	211830772	211787114	ENSG00000123684.12	-	protein_coding	KNOWN	LPGAT1	4	8	-0.128139
chr1	211792111	211792406	211792258	ENSG00000241395.3	-	misc_RNA	KNOWN	RN7SL344P	1	1	-0.067486
chr1	211803017	211803104	211803060	ENSG00000212205.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.067486
chr1	211829846	211853703	211841774	ENSG00000229258.5	+	antisense	KNOWN	RP11-552D8.1	4	6	-0.227009
chr1	211936249	211936634	211936441	ENSG00000233626.2	+	processed_pseudogene	KNOWN	RP11-565J7.1	1	1	0.075962
chr1	211940399	212035542	211987970	ENSG00000143493.12	-	protein_coding	KNOWN	INTS7	11	21	-0.171131
chr1	212025561	212025682	212025621	ENSG00000212187.1	+	snoRNA	NOVEL	SNORA26	1	1	-0.270578
chr1	212035553	212107400	212071476	ENSG00000143476.17	+	protein_coding	KNOWN	DTL	6	15	-0.236775
chr1	212051524	212052006	212051765	ENSG00000220749.4	-	processed_pseudogene	KNOWN	RPL21P28	1	1	-0.288913
chr1	212077613	212077685	212077649	ENSG00000264358.1	+	miRNA	KNOWN	MIR3122	1	1	-0.334541
chr1	212099521	212099676	212099598	ENSG00000252879.1	-	misc_RNA	KNOWN	RN7SKP98	1	1	-0.087642
chr1	212168207	212190259	212179233	ENSG00000229983.1	+	lincRNA	KNOWN	RP11-15I11.2	1	4	0.233882
chr1	212225278	212238977	212232127	ENSG00000226251.5	-	lincRNA	KNOWN	RP11-15I11.3	3	3	0.301214
chr1	212285537	212361863	212323700	ENSG00000066027.11	+	protein_coding	KNOWN	PPP2R5A	5	13	0.047346
chr1	212297448	212299579	212298513	ENSG00000230063.1	+	sense_intronic	KNOWN	RP11-384C4.6	1	2	0.184558
chr1	212299495	212331713	212315604	ENSG00000234915.1	-	antisense	KNOWN	RP11-384C4.7	1	2	0.121729
chr1	212309051	212309518	212309284	ENSG00000225338.1	-	processed_pseudogene	KNOWN	RPL23AP18	1	1	0.184558
chr1	212349978	212350069	212350023	ENSG00000212044.2	+	miRNA	NOVEL	AL360091.1	1	1	-0.191564
chr1	212352816	212352950	212352883	ENSG00000201544.1	+	snoRNA	KNOWN	SNORA16B	1	1	-0.274136
chr1	212357418	212358353	212357885	ENSG00000229832.1	+	sense_intronic	KNOWN	RP11-384C4.2	1	2	-0.274136
chr1	212363931	212414901	212389416	ENSG00000065600.12	-	protein_coding	KNOWN	TMEM206	5	9	-0.094634
chr1	212432887	212446379	212439633	ENSG00000117691.9	+	protein_coding	KNOWN	NENF	4	4	0.117083
chr1	212466816	212467743	212467279	ENSG00000224535.1	-	lincRNA	KNOWN	RP11-61J19.2	1	2	0.200633
chr1	212545694	212556065	212550879	ENSG00000228067.1	+	lincRNA	KNOWN	RP11-61J19.3	1	3	-0.172820
chr1	212557833	212559731	212558782	ENSG00000260805.2	-	lincRNA	KNOWN	RP11-61J19.5	1	1	-0.213817
chr1	212565334	212620777	212593055	ENSG00000162772.16	+	protein_coding	KNOWN	ATF3	11	5	0.121017
chr1	212624284	212626771	212625527	ENSG00000235862.2	-	antisense	KNOWN	RP11-338C15.5	1	2	0.187675
chr1	212624474	212626778	212625626	ENSG00000162771.7	+	protein_coding	KNOWN	FAM71A	1	1	0.187675
chr1	212647296	212647755	212647525	ENSG00000226036.1	+	processed_pseudogene	KNOWN	RP11-338C15.2	1	1	0.322162
chr1	212653999	212665434	212659716	ENSG00000237980.1	-	lincRNA	KNOWN	RP11-338C15.3	1	3	0.047369
chr1	212686418	212699985	212693201	ENSG00000123685.8	-	protein_coding	KNOWN	BATF3	3	3	0.114254
chr1	212692264	212692367	212692315	ENSG00000207491.1	+	snRNA	KNOWN	RNU6-423P	1	1	0.021982
chr1	212726153	212791782	212758967	ENSG00000117697.14	-	protein_coding	KNOWN	NSL1	6	7	0.034197
chr1	212791828	212816626	212804227	ENSG00000203705.10	+	protein_coding	KNOWN	TATDN3	17	10	-0.224005
chr1	212824027	212824505	212824266	ENSG00000236905.2	+	processed_pseudogene	KNOWN	RP11-348H3.2	1	1	-0.286520
chr1	212830141	212847649	212838895	ENSG00000185523.6	-	protein_coding	KNOWN	SPATA45	1	3	0.014916
chr1	212852108	212858088	212855098	ENSG00000198468.7	-	lincRNA	KNOWN	FLVCR1-AS1	3	2	0.101840
chr1	212853280	212853426	212853353	ENSG00000235182.1	+	processed_pseudogene	KNOWN	RP11-348H3.4	1	1	0.101840
chr1	212855175	212855366	212855270	ENSG00000236317.1	-	processed_pseudogene	KNOWN	RP11-348H3.5	1	1	0.101840
chr1	212858255	212899363	212878809	ENSG00000162769.12	+	protein_coding	KNOWN	FLVCR1	5	10	-0.201610
chr1	212916787	212917577	212917182	ENSG00000282718.1	+	lincRNA	KNOWN	RP11-348H3.8	1	3	0.166470
chr1	212950520	212992037	212971278	ENSG00000143494.15	+	protein_coding	KNOWN	VASH2	12	9	-0.061032
chr1	212992182	213015826	213004004	ENSG00000174606.12	-	protein_coding	KNOWN	ANGEL2	9	9	0.071713
chr1	213051233	213274773	213163003	ENSG00000136643.11	+	protein_coding	KNOWN	RPS6KC1	9	15	-0.286928
chr1	213428708	213429077	213428892	ENSG00000228646.3	-	processed_pseudogene	KNOWN	RPL31P13	1	1	-0.137209
chr1	213492301	213546447	213519374	ENSG00000225233.1	+	lincRNA	KNOWN	RP11-554K11.2	1	2	-0.324186
chr1	213609696	213609840	213609768	ENSG00000221026.1	-	miRNA	NOVEL	AL592063.1	1	1	-0.872384
chr1	213731416	213794587	213763001	ENSG00000228255.1	+	lincRNA	KNOWN	RP11-323I1.1	1	2	-0.439533
chr1	213817751	213988508	213903129	ENSG00000230461.8	-	processed_transcript	KNOWN	PROX1-AS1	46	10	-0.469467
chr1	213924749	213926654	213925701	ENSG00000281664.1	-	lincRNA	KNOWN	LINC00538	1	1	-0.301241
chr1	213983181	214041502	214012341	ENSG00000117707.15	+	protein_coding	KNOWN	PROX1	7	5	-0.347866
chr1	213983793	213986419	213985106	ENSG00000274895.1	-	antisense	KNOWN	RP11-478J18.2	1	1	-0.529497
chr1	214028891	214030901	214029896	ENSG00000272167.2	-	antisense	KNOWN	PROX1-AS1	1	1	-0.424696
chr1	214281102	214337131	214309116	ENSG00000143499.13	+	protein_coding	KNOWN	SMYD2	6	12	-0.147068
chr1	214344172	214357615	214350893	ENSG00000228470.1	-	sense_overlapping	KNOWN	RP11-176D17.3	1	3	0.075787
chr1	214348696	214552449	214450572	ENSG00000152104.11	-	protein_coding	KNOWN	PTPN14	5	19	0.101348
chr1	214482813	214483387	214483100	ENSG00000213036.3	-	processed_pseudogene	KNOWN	RP11-365D23.4	1	1	0.148575
chr1	214532195	214533467	214532831	ENSG00000215819.3	+	processed_pseudogene	KNOWN	KRT18P12	1	1	0.300234
chr1	214603195	214664588	214633891	ENSG00000117724.12	+	protein_coding	KNOWN	CENPF	6	20	-0.044757
chr1	214605470	214608840	214607155	ENSG00000250536.1	-	unprocessed_pseudogene	KNOWN	ABHD17AP3	1	2	-0.390509
chr1	214612960	214613398	214613179	ENSG00000224584.2	-	processed_pseudogene	KNOWN	RP11-365D23.2	1	1	0.128750
chr1	214870734	214871716	214871225	ENSG00000185221.6	+	processed_pseudogene	KNOWN	GAPDHP24	1	1	-0.148212
chr1	214943123	214943540	214943331	ENSG00000223869.1	+	processed_pseudogene	KNOWN	RP11-323K10.1	1	1	-0.204140
chr1	215005775	215237093	215121434	ENSG00000082482.13	+	protein_coding	KNOWN	KCNK2	9	7	-0.326455
chr1	215376484	215377374	215376929	ENSG00000232809.1	+	processed_pseudogene	KNOWN	VDAC1P10	1	1	-0.337176
chr1	215393646	215394418	215394032	ENSG00000282265.1	-	lincRNA	KNOWN	RP11-199H2.2	1	2	-0.274547
chr1	215567392	215621807	215594599	ENSG00000136636.12	+	protein_coding	KNOWN	KCTD3	5	18	-0.314878
chr1	215622894	216423396	216023145	ENSG00000042781.12	-	protein_coding	KNOWN	USH2A	4	72	-0.461150
chr1	215630026	215630117	215630071	ENSG00000202498.1	-	snoRNA	NOVEL	SNORD116	1	1	-0.053308
chr1	215886582	215901464	215894023	ENSG00000229242.1	+	antisense	KNOWN	RP5-1111A8.3	1	2	-0.567160
chr1	216072465	216086917	216079691	ENSG00000233620.5	+	antisense	KNOWN	RP11-22M7.2	4	3	-0.492971
chr1	216194051	216204366	216199208	ENSG00000236292.1	+	antisense	KNOWN	RP5-1099E6.3	1	3	-0.407241
chr1	216201635	216201826	216201730	ENSG00000226013.1	-	processed_pseudogene	KNOWN	MRPS18BP1	1	1	-0.407241
chr1	216503246	217137755	216820500	ENSG00000196482.16	-	protein_coding	KNOWN	ESRRG	24	9	-0.505073
chr1	217426992	217631082	217529037	ENSG00000092978.10	-	protein_coding	KNOWN	GPATCH2	5	10	-0.351057
chr1	217631324	217871696	217751510	ENSG00000162814.10	+	protein_coding	KNOWN	SPATA17	5	11	-0.598393
chr1	217781198	217785120	217783159	ENSG00000234070.1	-	antisense	KNOWN	SPATA17-AS1	1	3	-0.840104
chr1	217850403	217850633	217850518	ENSG00000228247.1	-	processed_pseudogene	KNOWN	UBBP2	1	1	-1.045512
chr1	217892900	217920804	217906852	ENSG00000231814.2	+	lincRNA	KNOWN	LINC00210	1	4	-0.509806
chr1	218031835	218033660	218032747	ENSG00000230714.1	+	lincRNA	KNOWN	RP11-152L7.1	1	2	-0.565120
chr1	218043505	218059140	218051322	ENSG00000232100.1	+	lincRNA	KNOWN	RP11-152L7.2	1	4	-0.795897
chr1	218129795	218129952	218129873	ENSG00000201493.1	+	snRNA	KNOWN	RNU1-141P	1	1	-0.934160
chr1	218285287	218337983	218311635	ENSG00000067533.5	+	protein_coding	KNOWN	RRP15	2	5	-0.441911
chr1	218301262	218301972	218301617	ENSG00000229016.1	-	processed_pseudogene	KNOWN	RP11-224O19.4	1	1	-0.331220
chr1	218338541	218338756	218338648	ENSG00000223375.1	+	processed_pseudogene	KNOWN	RP11-224O19.5	1	1	-0.586080
chr1	218344196	218345678	218344937	ENSG00000232480.1	-	antisense	KNOWN	TGFB2-AS1	1	3	-0.586080
chr1	218346235	218444619	218395427	ENSG00000092969.11	+	protein_coding	KNOWN	TGFB2	4	8	-0.097485
chr1	218442626	218443996	218443311	ENSG00000281453.1	+	3prime_overlapping_ncrna	KNOWN	TGFB2-OT1	1	1	-0.265078
chr1	218510096	218525978	218518037	ENSG00000228208.6	+	lincRNA	KNOWN	C1orf143	2	3	-0.058149
chr1	218541690	218541899	218541794	ENSG00000212610.2	-	snoRNA	NOVEL	U3	1	1	0.116938
chr1	218881600	218882650	218882125	ENSG00000226693.1	-	processed_pseudogene	KNOWN	NXNP1	1	1	-0.752554
chr1	218912757	218916184	218914470	ENSG00000225561.1	-	lincRNA	KNOWN	RP11-412H9.2	1	3	-0.344107
chr1	219086602	219173961	219130281	ENSG00000228063.1	-	antisense	KNOWN	LYPLAL1-AS1	1	4	-0.514962
chr1	219173844	219212865	219193354	ENSG00000143353.11	+	protein_coding	KNOWN	LYPLAL1	12	6	-0.406276
chr1	219199914	219200567	219200240	ENSG00000225920.2	-	processed_pseudogene	KNOWN	RIMKLBP2	1	1	-0.512600
chr1	219222248	219225497	219223872	ENSG00000223842.1	-	lincRNA	KNOWN	RP11-135J2.3	1	2	-0.561558
chr1	219270774	219273387	219272080	ENSG00000277007.1	+	lincRNA	KNOWN	RP11-392O17.2	1	1	-0.520526
chr1	219409681	219411941	219410811	ENSG00000228536.1	-	lincRNA	KNOWN	RP11-392O17.1	1	2	-0.308849
chr1	219435152	219442642	219438897	ENSG00000230024.1	-	lincRNA	KNOWN	RP11-95P13.1	1	3	-0.454290
chr1	219557192	219557701	219557446	ENSG00000238232.1	+	lincRNA	KNOWN	RP11-95P13.2	1	2	-0.297283
chr1	219609627	219612062	219610844	ENSG00000215817.4	-	processed_pseudogene	KNOWN	ZC3H11B	1	1	-0.287076
chr1	219663377	219663467	219663422	ENSG00000281745.1	+	miRNA	NOVEL	AC096643.1	1	1	-0.544501
chr1	219685427	219958647	219822037	ENSG00000196660.10	-	protein_coding	KNOWN	SLC30A10	4	9	-0.420463
chr1	219761789	219761875	219761832	ENSG00000252086.1	+	rRNA	KNOWN	RNA5SP76	1	1	-0.306172
chr1	219962652	219962865	219962758	ENSG00000221673.2	+	snoRNA	NOVEL	U3	1	1	-0.371955
chr1	219968601	220046658	220007629	ENSG00000136628.17	-	protein_coding	KNOWN	EPRS	6	32	-0.343617
chr1	220057482	220090462	220073972	ENSG00000162813.17	-	protein_coding	KNOWN	BPNT1	11	11	0.119668
chr1	220094102	220148041	220121071	ENSG00000067704.9	+	protein_coding	KNOWN	IARS2	4	23	-0.140752
chr1	220117853	220117962	220117907	ENSG00000207590.1	-	miRNA	KNOWN	MIR215	1	1	-0.003586
chr1	220118157	220118241	220118199	ENSG00000207624.1	-	miRNA	KNOWN	MIR194-1	1	1	-0.003586
chr1	220143964	220144351	220144157	ENSG00000232134.1	-	processed_pseudogene	KNOWN	RPS15AP12	1	1	-0.261645
chr1	220148293	220272454	220210373	ENSG00000118873.15	-	protein_coding	KNOWN	RAB3GAP2	10	35	-0.214568
chr1	220200538	220200619	220200578	ENSG00000281696.1	-	miRNA	KNOWN	MIR664A	1	1	-0.336466
chr1	220200546	220200676	220200611	ENSG00000222370.1	-	snoRNA	KNOWN	SNORA36B	1	1	-0.336466
chr1	220207618	220208282	220207950	ENSG00000270585.1	+	processed_pseudogene	KNOWN	RP11-568G11.4	1	1	-0.336466
chr1	220220291	220220593	220220442	ENSG00000270708.1	+	processed_pseudogene	KNOWN	RP11-568G11.5	1	1	-0.141498
chr1	220253570	220254536	220254053	ENSG00000218283.2	+	processed_pseudogene	KNOWN	MORF4L1P1	1	1	0.074070
chr1	220266706	220267917	220267311	ENSG00000213033.4	-	transcribed_processed_pseudogene	KNOWN	AURKAPS1	1	1	0.074070
chr1	220313945	220315565	220314755	ENSG00000230318.2	-	processed_pseudogene	KNOWN	XRCC6P3	1	1	-0.381078
chr1	220316667	220317599	220317133	ENSG00000232883.1	-	processed_pseudogene	KNOWN	RP11-302I18.1	1	1	-0.381078
chr1	220359731	220360183	220359957	ENSG00000226927.1	-	lincRNA	KNOWN	RP11-302I18.3	1	2	-0.457695
chr1	220401122	220404033	220402577	ENSG00000260505.1	+	lincRNA	KNOWN	RP11-410C4.5	1	1	-0.381462
chr1	220448516	220448853	220448684	ENSG00000235163.2	+	processed_pseudogene	KNOWN	RP11-410C4.1	1	1	-0.459548
chr1	220455154	220455312	220455233	ENSG00000234863.1	-	processed_pseudogene	KNOWN	RP11-410C4.2	1	1	-0.530060
chr1	220467954	220468808	220468381	ENSG00000226226.1	+	processed_pseudogene	KNOWN	PRELID3BP1	1	2	-0.530060
chr1	220485104	220487043	220486073	ENSG00000231529.1	-	lincRNA	KNOWN	RP11-410C4.4	1	2	-0.422581
chr1	220528183	220664461	220596322	ENSG00000116141.15	+	protein_coding	KNOWN	MARK1	5	18	-0.587841
chr1	220571739	220572035	220571887	ENSG00000243872.3	-	misc_RNA	KNOWN	RN7SL464P	1	1	-0.530773
chr1	220571834	220571899	220571866	ENSG00000281158.1	-	miRNA	NOVEL	AC096640.1	1	1	-0.530773
chr1	220625740	220628056	220626898	ENSG00000233012.2	+	transcribed_processed_pseudogene	KNOWN	HDAC1P2	2	2	-0.562512
chr1	220689845	220699157	220694501	ENSG00000162817.6	+	protein_coding	KNOWN	C1orf115	1	2	-0.389759
chr1	220748225	220784815	220766520	ENSG00000117791.15	+	protein_coding	KNOWN	MARC2	6	8	-0.052265
chr1	220786759	220819657	220803208	ENSG00000186205.12	+	protein_coding	KNOWN	MARC1	7	7	-0.144597
chr1	220825620	220826063	220825841	ENSG00000221571.3	+	lincRNA	KNOWN	RNU6ATAC35P	1	1	0.007779
chr1	220825776	220825893	220825834	ENSG00000276642.1	+	snRNA	NOVEL	U6atac	1	1	0.007779
chr1	220828676	220829211	220828943	ENSG00000272823.1	-	lincRNA	KNOWN	RP11-295M18.6	1	1	0.007779
chr1	220829255	220832429	220830842	ENSG00000238078.1	+	lincRNA	KNOWN	LINC01352	1	4	0.136486
chr1	220832763	220880140	220856451	ENSG00000257551.1	-	antisense	KNOWN	HLX-AS1	1	3	-0.141273
chr1	220879400	220885059	220882229	ENSG00000136630.12	+	protein_coding	KNOWN	HLX	3	4	0.020733
chr1	221133865	221134221	221134043	ENSG00000226211.1	-	processed_pseudogene	KNOWN	RP11-453O22.1	1	1	-0.345817
chr1	221330080	221336296	221333188	ENSG00000234754.1	-	lincRNA	KNOWN	C1orf140	2	3	0.050413
chr1	221508559	221510979	221509769	ENSG00000232436.1	+	lincRNA	KNOWN	RP11-103C3.1	1	2	-0.205750
chr1	221549786	221550643	221550214	ENSG00000227585.2	-	processed_pseudogene	KNOWN	RP11-103C3.2	1	1	-0.136186
chr1	221701424	221742176	221721800	ENSG00000143507.17	-	protein_coding	KNOWN	DUSP10	4	4	0.191374
chr1	221827666	221840666	221834166	ENSG00000227925.1	-	lincRNA	KNOWN	RP11-191N8.2	1	4	0.145279
chr1	221837334	221837437	221837385	ENSG00000200033.1	-	snRNA	KNOWN	RNU6-403P	1	1	0.201221
chr1	221880981	221978523	221929752	ENSG00000238042.5	-	lincRNA	KNOWN	RP11-815M8.1	2	5	0.042219
chr1	221966341	221984964	221975652	ENSG00000228437.5	+	lincRNA	KNOWN	RP11-400N13.2	2	3	0.207909
chr1	222013007	222013090	222013048	ENSG00000264972.2	+	miRNA	NOVEL	AC092765.1	1	1	-0.223870
chr1	222041705	222064763	222053234	ENSG00000232679.1	-	lincRNA	KNOWN	RP11-400N13.3	1	3	0.386671
chr1	222089169	222387434	222238301	ENSG00000236230.1	-	lincRNA	KNOWN	RP11-400N13.1	1	4	-0.172363
chr1	222261833	222262796	222262314	ENSG00000227613.1	-	processed_pseudogene	KNOWN	QRSL1P2	1	1	-0.123737
chr1	222452738	222454705	222453721	ENSG00000226643.2	-	lincRNA	KNOWN	RP11-358H9.1	1	3	0.106713
chr1	222468094	222470882	222469488	ENSG00000234419.1	+	processed_pseudogene	KNOWN	CICP13	1	1	0.234925
chr1	222477252	222504622	222490937	ENSG00000276997.4	-	lincRNA	KNOWN	RP11-378J18.9	6	5	0.402259
chr1	222503632	222503735	222503683	ENSG00000222399.1	-	snRNA	KNOWN	RNU6-791P	1	1	0.307005
chr1	222510169	222519732	222514950	ENSG00000267305.2	-	unprocessed_pseudogene	KNOWN	RP11-378J18.10	1	4	0.091992
chr1	222522258	222548103	222535180	ENSG00000143512.12	-	protein_coding	KNOWN	HHIPL2	4	9	-0.033780
chr1	222557902	222589933	222573917	ENSG00000143498.17	-	protein_coding	KNOWN	TAF1A	7	12	-0.226553
chr1	222589825	222593032	222591428	ENSG00000225265.1	+	antisense	KNOWN	TAF1A-AS1	3	3	-0.213734
chr1	222618086	222668012	222643049	ENSG00000154305.16	+	protein_coding	KNOWN	MIA3	12	28	-0.139280
chr1	222641414	222641858	222641636	ENSG00000229399.1	-	processed_pseudogene	KNOWN	RP11-378J18.6	1	1	0.002908
chr1	222658867	222661512	222660189	ENSG00000272750.1	-	antisense	KNOWN	RP11-378J18.8	1	1	-0.221425
chr1	222668013	222713210	222690611	ENSG00000186063.12	-	protein_coding	KNOWN	AIDA	6	10	-0.196520
chr1	222712553	222735196	222723874	ENSG00000162819.11	+	protein_coding	KNOWN	BROX	9	13	-0.243741
chr1	222737207	222750805	222744006	ENSG00000197520.10	+	protein_coding	KNOWN	FAM177B	6	6	-0.166384
chr1	222815022	222837384	222826203	ENSG00000228106.5	+	lincRNA	KNOWN	RP11-452F19.3	12	5	-0.303585
chr1	222815064	222994906	222904985	ENSG00000278610.1	+	lincRNA	KNOWN	RP11-455P21.3	1	8	-0.149687
chr1	222872271	223005995	222939133	ENSG00000154309.8	+	protein_coding	KNOWN	DISP1	3	8	-0.056607
chr1	222945725	222945900	222945812	ENSG00000234523.1	+	processed_pseudogene	KNOWN	NDUFB1P2	1	1	-0.151462
chr1	223109406	223143282	223126344	ENSG00000187554.11	-	protein_coding	KNOWN	TLR5	5	6	0.046264
chr1	223144049	223144954	223144501	ENSG00000236846.1	+	lincRNA	KNOWN	RP11-239E10.2	1	2	0.122049
chr1	223181144	223188154	223184649	ENSG00000226601.1	+	lincRNA	KNOWN	RP11-239E10.3	1	3	0.200052
chr1	223220819	223364202	223292510	ENSG00000143502.14	-	protein_coding	KNOWN	SUSD4	10	9	-0.101972
chr1	223373822	223373956	223373889	ENSG00000251789.2	+	snRNA	KNOWN	RNU4-57P	1	1	-0.145337
chr1	223393417	223395470	223394443	ENSG00000178395.6	+	protein_coding	KNOWN	CCDC185	1	1	-0.393435
chr1	223538007	223665734	223601870	ENSG00000203697.11	-	protein_coding	KNOWN	CAPN8	11	21	0.028060
chr1	223644110	223644383	223644246	ENSG00000227002.2	-	processed_pseudogene	KNOWN	SNRPEP10	1	1	0.134303
chr1	223690051	223690114	223690082	ENSG00000212398.1	+	snRNA	KNOWN	RNU6-1248P	1	1	-0.065837
chr1	223701593	223776018	223738805	ENSG00000162909.17	+	protein_coding	KNOWN	CAPN2	12	21	0.502494
chr1	223779899	223845972	223812935	ENSG00000143514.16	-	protein_coding	KNOWN	TP53BP2	14	19	0.057274
chr1	223856579	223857387	223856983	ENSG00000227621.1	-	processed_pseudogene	KNOWN	PHBP11	1	1	0.005952
chr1	223863726	223864851	223864288	ENSG00000188460.4	-	processed_pseudogene	KNOWN	ACTBP11	1	1	0.005952
chr1	223947605	223950416	223949010	ENSG00000233771.2	+	unprocessed_pseudogene	KNOWN	CICP5	1	3	-0.189314
chr1	223951394	223992594	223971994	ENSG00000272645.3	-	transcribed_unprocessed_pseudogene	KNOWN	GTF2IP20	3	13	0.195753
chr1	223976146	223976249	223976197	ENSG00000212157.1	-	snRNA	KNOWN	RNU6-1319P	1	1	0.238584
chr1	223992743	224010612	224001677	ENSG00000185495.10	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-504P24.3	6	4	0.110748
chr1	223994262	223995196	223994729	ENSG00000278467.1	+	lincRNA	KNOWN	RP11-504P24.9	1	2	0.099941
chr1	224030704	224035056	224032880	ENSG00000229930.1	-	unprocessed_pseudogene	KNOWN	RP11-504P24.5	1	3	0.191527
chr1	224107282	224107541	224107411	ENSG00000252484.1	-	misc_RNA	KNOWN	RN7SKP49	1	1	0.030962
chr1	224114087	224162047	224138067	ENSG00000143756.11	+	protein_coding	KNOWN	FBXO28	5	5	0.107229
chr1	224175476	224175706	224175591	ENSG00000236773.1	-	processed_pseudogene	KNOWN	RP11-365O16.1	1	1	0.241218
chr1	224175756	224193441	224184598	ENSG00000143753.12	+	protein_coding	KNOWN	DEGS1	5	4	0.226913
chr1	224179641	224179767	224179704	ENSG00000201898.1	+	snoRNA	NOVEL	SNORA72	1	1	0.241218
chr1	224208747	224213279	224211013	ENSG00000232628.5	-	sense_intronic	KNOWN	RP11-365O16.3	2	2	0.415043
chr1	224219613	224228043	224223828	ENSG00000237101.1	+	antisense	KNOWN	RP11-365O16.6	1	3	0.509448
chr1	224227334	224330387	224278860	ENSG00000143748.17	-	protein_coding	KNOWN	NVL	24	24	0.127039
chr1	224257004	224257141	224257072	ENSG00000221406.1	-	miRNA	KNOWN	MIR320B2	1	1	0.046188
chr1	224297646	224298600	224298123	ENSG00000229742.1	+	processed_pseudogene	KNOWN	RP11-365O16.5	1	2	0.358166
chr1	224305380	224305483	224305431	ENSG00000206887.1	+	snRNA	KNOWN	RNU6-1008P	1	1	0.358166
chr1	224356850	224379459	224368154	ENSG00000143771.11	+	protein_coding	KNOWN	CNIH4	8	5	0.176815
chr1	224385143	224437033	224411088	ENSG00000162923.14	-	protein_coding	KNOWN	WDR26	9	16	0.218677
chr1	224398227	224398311	224398269	ENSG00000266618.1	-	miRNA	KNOWN	MIR4742	1	1	-0.032815
chr1	224434660	224740549	224587604	ENSG00000143786.7	+	protein_coding	KNOWN	CNIH3	14	8	0.109399
chr1	224574434	224575389	224574911	ENSG00000229991.1	+	processed_pseudogene	KNOWN	AKR1B1P1	1	1	0.266596
chr1	224611404	224616220	224613812	ENSG00000233384.2	-	bidirectional_promoter_lncrna	KNOWN	RP11-100E13.1	1	4	0.062845
chr1	224661173	224661886	224661529	ENSG00000234247.1	-	processed_pseudogene	KNOWN	RP11-100E13.3	1	1	0.114712
chr1	224717504	224730662	224724083	ENSG00000229400.1	-	antisense	KNOWN	RP11-3L21.2	1	3	0.434794
chr1	224722467	224722541	224722504	ENSG00000251933.1	+	miRNA	NOVEL	AL596330.1	1	1	0.454562
chr1	224766900	224773341	224770120	ENSG00000225334.1	+	antisense	KNOWN	RP11-449J1.1	1	2	-0.071863
chr1	224896262	225399292	225147777	ENSG00000185842.14	+	protein_coding	KNOWN	DNAH14	18	84	-0.446990
chr1	225401502	225428925	225415213	ENSG00000143815.14	-	protein_coding	KNOWN	LBR	8	14	-0.109008
chr1	225447243	225465343	225456293	ENSG00000234476.1	-	sense_intronic	KNOWN	RP11-496N12.6	2	2	0.076134
chr1	225465021	225473837	225469429	ENSG00000282418.1	+	lincRNA	KNOWN	RP11-496N12.9	1	2	0.292179
chr1	225486835	225653142	225569988	ENSG00000154380.17	-	protein_coding	KNOWN	ENAH	9	15	0.023744
chr1	225700604	225752243	225726423	ENSG00000227496.1	+	antisense	KNOWN	RP11-145A3.1	1	3	0.257875
chr1	225710968	225736274	225723621	ENSG00000226349.1	-	sense_intronic	KNOWN	RP11-145A3.2	1	3	0.243234
chr1	225741275	225741380	225741327	ENSG00000223306.2	+	snRNA	KNOWN	RNU6-1304P	1	1	0.289529
chr1	225777813	225790466	225784139	ENSG00000143742.12	+	protein_coding	KNOWN	SRP9	5	4	0.393017
chr1	225803148	225803448	225803298	ENSG00000234112.2	+	processed_pseudogene	KNOWN	RP11-145A3.4	1	1	-0.073067
chr1	225810092	225845563	225827827	ENSG00000143819.12	+	protein_coding	KNOWN	EPHX1	6	9	0.426058
chr1	225840883	225846522	225843702	ENSG00000242861.1	-	antisense	KNOWN	RP11-285F7.2	1	2	0.433911
chr1	225845536	225882369	225863952	ENSG00000196187.11	-	protein_coding	KNOWN	TMEM63A	9	25	0.708093
chr1	225886282	225911382	225898832	ENSG00000243709.1	-	protein_coding	KNOWN	LEFTY1	2	4	0.458976
chr1	225886696	225924278	225905487	ENSG00000255835.1	-	protein_coding	KNOWN	RP4-559A3.7	1	8	0.441834
chr1	225919877	225924340	225922108	ENSG00000143811.16	-	protein_coding	KNOWN	PYCR2	9	9	0.412325
chr1	225922080	225922142	225922111	ENSG00000274674.1	-	miRNA	KNOWN	MIR6741	1	1	0.412325
chr1	225936411	225937557	225936984	ENSG00000248322.1	-	sense_overlapping	KNOWN	RP4-559A3.6	1	2	0.246569
chr1	225936598	225941489	225939043	ENSG00000143768.11	-	protein_coding	KNOWN	LEFTY2	4	6	0.246569
chr1	225964179	225964428	225964303	ENSG00000213032.3	+	processed_pseudogene	KNOWN	NDUFA3P3	1	1	0.287543
chr1	225982702	225999331	225991016	ENSG00000143751.9	-	protein_coding	KNOWN	SDE2	1	7	0.040908
chr1	226060712	226061876	226061294	ENSG00000272562.1	-	antisense	KNOWN	RP11-396C23.4	1	2	0.199476
chr1	226061851	226072001	226066926	ENSG00000163041.9	+	protein_coding	KNOWN	H3F3A	4	5	0.163864
chr1	226083639	226090292	226086965	ENSG00000225518.2	+	lincRNA	KNOWN	RP11-396C23.2	2	4	0.035361
chr1	226127178	226127346	226127262	ENSG00000270598.1	+	processed_pseudogene	KNOWN	RP11-396C23.3	1	1	0.367270
chr1	226144679	226186730	226165704	ENSG00000182827.8	-	protein_coding	KNOWN	ACBD3	2	8	0.175972
chr1	226148003	226155071	226151537	ENSG00000234478.1	+	antisense	KNOWN	RP11-275I14.4	1	2	0.287817
chr1	226188870	226189221	226189045	ENSG00000223570.2	-	processed_pseudogene	KNOWN	RP11-275I14.2	1	1	0.023686
chr1	226223618	226227054	226225336	ENSG00000185155.11	+	protein_coding	KNOWN	MIXL1	3	2	-0.005856
chr1	226231149	226309869	226270509	ENSG00000183814.15	-	protein_coding	KNOWN	LIN9	5	15	0.006648
chr1	226318015	226318693	226318354	ENSG00000236994.1	-	processed_pseudogene	KNOWN	YBX1P9	1	1	-0.103928
chr1	226331999	226333655	226332827	ENSG00000275406.1	-	unprocessed_pseudogene	KNOWN	RP11-125A15.3	1	3	-0.085651
chr1	226360691	226408079	226384385	ENSG00000143799.12	-	protein_coding	KNOWN	PARP1	10	23	0.189785
chr1	226411615	226412135	226411875	ENSG00000270287.1	-	processed_pseudogene	KNOWN	RP11-118H4.3	1	1	0.184603
chr1	226438564	226439344	226438954	ENSG00000229965.1	+	processed_pseudogene	KNOWN	RP11-118H4.1	1	1	0.011209
chr1	226445937	226446292	226446114	ENSG00000223282.1	+	misc_RNA	KNOWN	RN7SKP165	1	1	0.011209
chr1	226493188	226493489	226493338	ENSG00000177770.11	-	processed_pseudogene	KNOWN	CDKN2AIPNLP1	1	1	0.111983
chr1	226548800	226609214	226579007	ENSG00000203685.9	+	protein_coding	KNOWN	C1orf95	3	4	0.114408
chr1	226631690	226739323	226685506	ENSG00000143772.9	-	protein_coding	KNOWN	ITPKB	3	8	0.303473
chr1	226656640	226675067	226665853	ENSG00000228382.1	-	sense_intronic	KNOWN	ITPKB-IT1	2	2	0.485855
chr1	226668897	226676345	226672621	ENSG00000228548.1	+	antisense	KNOWN	ITPKB-AS1	1	2	0.441431
chr1	226781501	226781744	226781622	ENSG00000238183.2	+	processed_pseudogene	KNOWN	RPS27P5	1	1	0.008091
chr1	226870184	226896105	226883144	ENSG00000143801.16	+	protein_coding	KNOWN	PSEN2	11	13	0.186660
chr1	226897536	226987545	226942540	ENSG00000163050.16	+	protein_coding	KNOWN	ADCK3	9	20	0.268658
chr1	226958069	226958267	226958168	ENSG00000228525.1	-	processed_pseudogene	KNOWN	RP5-1087E8.2	1	1	0.380048
chr1	226989865	227318474	227154169	ENSG00000143776.18	-	protein_coding	KNOWN	CDC42BPA	13	37	-0.162859
chr1	226992140	226993206	226992673	ENSG00000233706.1	+	antisense	KNOWN	RP5-1087E8.3	1	3	0.393648
chr1	227178333	227183444	227180888	ENSG00000228625.1	+	antisense	KNOWN	RP11-1B20.1	1	3	-0.284729
chr1	227234269	227235355	227234812	ENSG00000228729.1	+	processed_pseudogene	KNOWN	RP11-211A18.2	1	2	-0.333538
chr1	227264776	227265207	227264991	ENSG00000236636.2	-	processed_pseudogene	KNOWN	RP11-211A18.1	1	1	-0.172836
chr1	227393591	227431035	227412313	ENSG00000234277.2	+	lincRNA	KNOWN	CTD-2090I13.1	2	4	-0.024957
chr1	227410617	227411319	227410968	ENSG00000232864.1	-	processed_pseudogene	KNOWN	NUCKS1P1	1	1	0.083818
chr1	227430526	227430976	227430751	ENSG00000242757.1	+	processed_pseudogene	KNOWN	CTD-2090I13.3	1	1	0.266388
chr1	227434064	227434346	227434205	ENSG00000224834.1	+	processed_pseudogene	KNOWN	BTF3P9	1	1	0.266388
chr1	227482253	227482454	227482353	ENSG00000237193.1	+	processed_pseudogene	KNOWN	RP11-275O4.4	1	1	0.200141
chr1	227490691	227492296	227491493	ENSG00000278180.1	+	unprocessed_pseudogene	KNOWN	FAM166AP5	1	5	0.205649
chr1	227493029	227495142	227494085	ENSG00000237469.2	-	unprocessed_pseudogene	KNOWN	TUBB8P10	1	4	0.205649
chr1	227506182	227508292	227507237	ENSG00000235827.2	+	unprocessed_pseudogene	KNOWN	TUBB8P9	1	4	0.205649
chr1	227509028	227510618	227509823	ENSG00000227711.3	-	unprocessed_pseudogene	KNOWN	FAM166AP4	1	5	0.086836
chr1	227561181	227561300	227561240	ENSG00000202264.1	+	rRNA	KNOWN	RNA5SP77	1	1	0.202416
chr1	227563543	227677443	227620493	ENSG00000181450.17	+	protein_coding	KNOWN	ZNF678	5	6	-0.196961
chr1	227598424	227599094	227598759	ENSG00000225934.2	-	processed_pseudogene	KNOWN	RP4-566D2.1	1	1	-0.340594
chr1	227645280	227645366	227645323	ENSG00000265216.1	+	miRNA	NOVEL	AL592310.1	1	1	-0.270578
chr1	227696892	227706699	227701795	ENSG00000215812.5	-	unprocessed_pseudogene	KNOWN	ZNF847P	1	5	-0.317771
chr1	227728539	227781231	227754885	ENSG00000143740.14	+	protein_coding	KNOWN	SNAP47	13	5	0.392202
chr1	227730425	227735411	227732918	ENSG00000081692.12	-	protein_coding	KNOWN	JMJD4	7	6	0.308616
chr1	227743831	227747191	227745511	ENSG00000230005.2	-	antisense	KNOWN	SNAP47-AS1	1	2	0.308616
chr1	227815693	227846470	227831081	ENSG00000185888.5	+	protein_coding	KNOWN	PRSS38	1	5	-0.048562
chr1	227918656	227947898	227933277	ENSG00000143816.7	-	protein_coding	KNOWN	WNT9A	1	4	0.264386
chr1	227941590	227941683	227941636	ENSG00000264483.1	-	miRNA	KNOWN	MIR5008	1	1	0.276416
chr1	227975390	227978193	227976791	ENSG00000233003.4	-	unprocessed_pseudogene	KNOWN	CICP26	1	3	0.362639
chr1	227980051	227980227	227980139	ENSG00000274886.1	+	unprocessed_pseudogene	KNOWN	SEPT14P17	1	1	0.362639
chr1	228007051	228061260	228034155	ENSG00000154342.5	+	protein_coding	KNOWN	WNT3A	1	4	0.308376
chr1	228073909	228076550	228075229	ENSG00000276255.2	-	lincRNA	KNOWN	RP5-881P19.7	2	1	0.793910
chr1	228082660	228099212	228090936	ENSG00000143761.13	+	protein_coding	KNOWN	ARF1	14	6	0.746048
chr1	228097263	228097341	228097302	ENSG00000264944.1	+	miRNA	KNOWN	MIR3620	1	1	0.707921
chr1	228100726	228105411	228103068	ENSG00000143793.12	-	protein_coding	KNOWN	C1orf35	7	9	0.707921
chr1	228106679	228109312	228107995	ENSG00000162910.18	-	protein_coding	KNOWN	MRPL55	34	6	0.707921
chr1	228114997	228115473	228115235	ENSG00000224566.2	-	processed_pseudogene	KNOWN	FAM96AP2	1	1	0.425036
chr1	228121523	228123771	228122647	ENSG00000280157.1	+	TEC	KNOWN	RP11-520H14.7	1	1	0.425036
chr1	228134785	228134992	228134888	ENSG00000227625.2	-	processed_pseudogene	KNOWN	RP11-520H14.1	1	1	0.244843
chr1	228139962	228148984	228144473	ENSG00000143774.16	+	protein_coding	KNOWN	GUK1	39	9	0.244843
chr1	228149852	228159826	228154839	ENSG00000198835.3	+	protein_coding	KNOWN	GJC2	1	2	0.912086
chr1	228164086	228165512	228164799	ENSG00000203684.5	-	lincRNA	KNOWN	IBA57-AS1	2	2	0.922067
chr1	228165815	228182257	228174036	ENSG00000181873.12	+	protein_coding	KNOWN	IBA57	3	3	0.532478
chr1	228203506	228213664	228208585	ENSG00000162913.9	-	protein_coding	KNOWN	C1orf145	3	4	0.420312
chr1	228208130	228378876	228293503	ENSG00000154358.19	+	protein_coding	KNOWN	OBSCN	12	116	0.320250
chr1	228270443	228274397	228272420	ENSG00000269890.1	-	antisense	KNOWN	RP5-1139B12.2	1	1	0.230228
chr1	228274584	228276066	228275325	ENSG00000269934.1	-	antisense	KNOWN	RP5-1139B12.3	2	2	0.230228
chr1	228295911	228302998	228299454	ENSG00000270110.1	-	antisense	KNOWN	RP5-1139B12.4	1	2	0.447902
chr1	228384114	228385016	228384565	ENSG00000270104.1	-	lincRNA	KNOWN	RP11-245P10.6	1	2	1.138989
chr1	228393673	228406840	228400256	ENSG00000154370.13	-	protein_coding	KNOWN	TRIM11	6	6	0.332390
chr1	228394290	228396967	228395628	ENSG00000270094.1	+	antisense	KNOWN	RP11-245P10.8	1	3	0.332390
chr1	228397048	228397109	228397078	ENSG00000278067.1	-	miRNA	KNOWN	MIR6742	1	1	0.332390
chr1	228407381	228409694	228408537	ENSG00000231563.1	+	antisense	KNOWN	RP11-245P10.4	1	3	0.332390
chr1	228407940	228416861	228412400	ENSG00000162931.11	-	protein_coding	KNOWN	TRIM17	8	7	0.537687
chr1	228424845	228425325	228425085	ENSG00000168148.3	-	protein_coding	KNOWN	HIST3H3	1	1	0.599288
chr1	228449163	228449621	228449392	ENSG00000230841.2	-	processed_pseudogene	KNOWN	RPL23AP15	1	1	0.507029
chr1	228456979	228457873	228457426	ENSG00000181218.5	-	protein_coding	KNOWN	HIST3H2A	1	1	0.401161
chr1	228457435	228457572	228457503	ENSG00000281451.1	+	miRNA	NOVEL	AL139288.1	1	1	0.401161
chr1	228458107	228460470	228459288	ENSG00000196890.4	+	protein_coding	KNOWN	HIST3H2BB	1	1	0.401161
chr1	228462074	228462152	228462113	ENSG00000266174.1	+	miRNA	KNOWN	MIR4666A	1	1	0.401161
chr1	228464103	228464626	228464364	ENSG00000181201.3	-	unitary_pseudogene	KNOWN	HIST3H2BA	1	1	0.401161
chr1	228486188	228487120	228486654	ENSG00000279306.1	-	TEC	KNOWN	RP5-915N17.11	1	1	0.351859
chr1	228487061	228495766	228491413	ENSG00000168159.10	+	protein_coding	KNOWN	RNF187	2	4	0.522472
chr1	228508655	228512305	228510480	ENSG00000215811.5	-	unprocessed_pseudogene	KNOWN	BTNL10	1	4	0.299466
chr1	228555793	228555901	228555847	ENSG00000202056.1	+	rRNA	KNOWN	RNA5SP19	1	1	0.645070
chr1	228558296	228558339	228558317	ENSG00000251823.2	-	rRNA	KNOWN	RNA5SP162	1	1	0.645070
chr1	228610268	228610386	228610327	ENSG00000199352.1	-	rRNA	KNOWN	RNA5S1	1	1	0.726796
chr1	228612509	228612627	228612568	ENSG00000201588.1	-	rRNA	KNOWN	RNA5S2	1	1	0.726796
chr1	228614750	228614868	228614809	ENSG00000199337.1	-	rRNA	KNOWN	RNA5S3	1	1	0.726796
chr1	228616991	228617109	228617050	ENSG00000200381.1	-	rRNA	KNOWN	RNA5S4	1	1	0.726796
chr1	228619232	228619350	228619291	ENSG00000199396.1	-	rRNA	KNOWN	RNA5S5	1	1	0.726796
chr1	228621447	228621565	228621506	ENSG00000200624.1	-	rRNA	KNOWN	RNA5S6	1	1	0.726796
chr1	228623667	228623785	228623726	ENSG00000202521.1	-	rRNA	KNOWN	RNA5S7	1	1	0.726796
chr1	228625909	228626027	228625968	ENSG00000200343.1	-	rRNA	KNOWN	RNA5S8	1	1	0.726796
chr1	228628148	228628266	228628207	ENSG00000201321.1	-	rRNA	KNOWN	RNA5S9	1	1	0.726796
chr1	228628176	228628234	228628205	ENSG00000281588.1	-	miRNA	NOVEL	AL713899.1	1	1	0.726796
chr1	228630390	228630508	228630449	ENSG00000199910.1	-	rRNA	KNOWN	RNA5S10	1	1	0.662662
chr1	228632631	228632749	228632690	ENSG00000199334.1	-	rRNA	KNOWN	RNA5S11	1	1	0.662662
chr1	228634871	228634989	228634930	ENSG00000199270.1	-	rRNA	KNOWN	RNA5S12	1	1	0.662662
chr1	228637096	228637214	228637155	ENSG00000202526.1	-	rRNA	KNOWN	RNA5S13	1	1	0.662662
chr1	228639337	228639455	228639396	ENSG00000201355.1	-	rRNA	KNOWN	RNA5S14	1	1	0.662662
chr1	228641568	228641686	228641627	ENSG00000201925.1	-	rRNA	KNOWN	RNA5S15	1	1	0.662662
chr1	228643809	228643927	228643868	ENSG00000202257.1	-	rRNA	KNOWN	RNA5S16	1	1	0.662662
chr1	228646040	228646158	228646099	ENSG00000200370.1	-	rRNA	KNOWN	RNA5S17	1	1	0.662662
chr1	228647912	228648032	228647972	ENSG00000212237.1	-	rRNA	KNOWN	RNA5SP18	1	1	0.662662
chr1	228650241	228651379	228650810	ENSG00000183929.7	+	processed_pseudogene	KNOWN	DUSP5P1	1	1	0.690086
chr1	228652436	228652560	228652498	ENSG00000206878.1	+	snoRNA	NOVEL	SNORA51	1	1	0.690086
chr1	228687415	228687826	228687620	ENSG00000234975.6	+	processed_pseudogene	KNOWN	FTH1P2	1	1	-0.166470
chr1	228735077	228746669	228740873	ENSG00000116574.5	+	protein_coding	KNOWN	RHOU	1	3	-0.344525
chr1	228776312	228776865	228776588	ENSG00000271475.1	+	processed_pseudogene	KNOWN	RP4-799G3.1	1	1	-0.064599
chr1	228858010	228858556	228858283	ENSG00000271399.1	+	processed_pseudogene	KNOWN	RP4-799G3.2	1	1	-0.338312
chr1	229022773	229038274	229030523	ENSG00000282111.1	-	lincRNA	KNOWN	RP5-1065P14.3	1	4	-0.153004
chr1	229042171	229042591	229042381	ENSG00000229840.2	+	processed_pseudogene	KNOWN	ISCA1P2	1	1	-0.154648
chr1	229092815	229094905	229093860	ENSG00000236975.1	-	lincRNA	KNOWN	RP5-1065P14.2	1	2	-0.163509
chr1	229223461	229227562	229225511	ENSG00000233920.1	-	antisense	KNOWN	RP5-1061H20.5	1	2	-0.074367
chr1	229249636	229251810	229250723	ENSG00000177800.2	+	protein_coding	KNOWN	TMEM78	1	1	0.062523
chr1	229258281	229271028	229264654	ENSG00000177788.5	-	lincRNA	KNOWN	RP5-1061H20.4	2	2	0.061851
chr1	229270927	229271599	229271263	ENSG00000240524.2	-	transcribed_processed_pseudogene	KNOWN	RP5-1061H20.3	1	1	0.159106
chr1	229271062	229305894	229288478	ENSG00000168118.11	+	protein_coding	KNOWN	RAB4A	5	8	0.155672
chr1	229304857	229305504	229305180	ENSG00000213029.3	+	protein_coding	KNOWN	SPHAR	1	1	0.151581
chr1	229319403	229323087	229321245	ENSG00000237481.1	+	antisense	KNOWN	RP4-803J11.2	1	2	-0.050809
chr1	229321005	229343294	229332149	ENSG00000154429.10	-	protein_coding	KNOWN	CCSAP	4	4	-0.059034
chr1	229383128	229383188	229383158	ENSG00000252506.1	+	snRNA	KNOWN	RNU6-180P	1	1	0.000199
chr1	229410500	229410767	229410633	ENSG00000252051.1	-	misc_RNA	KNOWN	RN7SKP276	1	1	0.053518
chr1	229425020	229425650	229425335	ENSG00000230331.1	+	processed_pseudogene	KNOWN	RP5-1068B5.1	1	2	0.053518
chr1	229431245	229434098	229432671	ENSG00000143632.14	-	protein_coding	KNOWN	ACTA1	2	7	0.252883
chr1	229440260	229508341	229474300	ENSG00000069248.11	-	protein_coding	KNOWN	NUP133	4	26	-0.111559
chr1	229440284	229441020	229440652	ENSG00000226920.1	-	3prime_overlapping_ncrna	KNOWN	RP5-1068B5.5	1	2	0.252883
chr1	229508501	229514272	229511386	ENSG00000223635.1	+	antisense	KNOWN	RP4-613A2.1	1	3	-0.117271
chr1	229516582	229558695	229537638	ENSG00000135776.4	-	protein_coding	KNOWN	ABCB10	3	13	-0.034978
chr1	229535064	229535189	229535126	ENSG00000199672.1	-	snRNA	KNOWN	RNU4-21P	1	1	-0.100653
chr1	229549905	229550022	229549963	ENSG00000201492.1	+	rRNA	KNOWN	RNA5SP78	1	1	-0.007392
chr1	229570532	229570796	229570664	ENSG00000229367.1	+	processed_pseudogene	KNOWN	HMGN2P19	1	1	0.010050
chr1	229593111	229626047	229609579	ENSG00000135801.9	-	protein_coding	KNOWN	TAF5L	5	5	-0.233703
chr1	229626234	229660199	229643216	ENSG00000135763.9	+	protein_coding	KNOWN	URB2	2	10	0.068337
chr1	229688999	229689904	229689451	ENSG00000213028.3	-	processed_pseudogene	KNOWN	RP11-108F13.2	1	1	-0.318384
chr1	229705234	229705861	229705547	ENSG00000225984.1	-	processed_pseudogene	KNOWN	HMGB1P26	1	1	-0.140299
chr1	229875550	229885752	229880651	ENSG00000227043.1	-	lincRNA	KNOWN	RP11-286M16.1	1	2	0.184110
chr1	230002730	230007162	230004946	ENSG00000228058.1	+	lincRNA	KNOWN	RP11-552D4.1	1	2	-0.082038
chr1	230049182	230049250	230049216	ENSG00000211525.2	-	miRNA	NOVEL	BX323860.1	1	1	-0.399667
chr1	230057990	230282124	230170057	ENSG00000143641.9	+	protein_coding	KNOWN	GALNT2	5	16	0.103665
chr1	230258694	230268483	230263588	ENSG00000227006.1	-	antisense	KNOWN	RP5-956O18.2	1	3	0.115451
chr1	230280312	230281893	230281102	ENSG00000224407.1	-	antisense	KNOWN	RP5-956O18.3	1	2	0.339475
chr1	230314482	230425729	230370105	ENSG00000177614.9	-	protein_coding	KNOWN	PGBD5	3	7	-0.021270
chr1	230426491	230436822	230431656	ENSG00000282564.1	+	lincRNA	KNOWN	RP4-553F17.1	1	2	-0.222341
chr1	230592660	230595583	230594121	ENSG00000232964.2	-	lincRNA	KNOWN	RP11-543E8.1	1	2	-0.537260
chr1	230612009	230612412	230612210	ENSG00000235817.2	-	processed_pseudogene	KNOWN	RP11-543E8.2	1	1	-0.016785
chr1	230642489	230693982	230668235	ENSG00000135775.13	+	protein_coding	KNOWN	COG2	9	19	-0.092315
chr1	230702523	230714297	230708410	ENSG00000135744.7	-	protein_coding	KNOWN	AGT	1	5	0.139782
chr1	230710698	230795492	230753095	ENSG00000244137.1	-	antisense	KNOWN	RP11-99J16__A.2	3	3	0.100989
chr1	230747384	230802003	230774693	ENSG00000135773.12	+	protein_coding	KNOWN	CAPN9	4	20	0.240845
chr1	230820250	230820358	230820304	ENSG00000202063.1	+	rRNA	KNOWN	RNA5SP79	1	1	0.100404
chr1	230823641	230824707	230824174	ENSG00000225656.1	-	lincRNA	KNOWN	RP5-858B6.1	1	2	0.100404
chr1	230837119	230869589	230853354	ENSG00000119280.16	-	protein_coding	KNOWN	C1orf198	7	6	0.375104
chr1	230874846	230879015	230876930	ENSG00000223393.1	+	antisense	KNOWN	RP5-858B6.3	1	3	0.091992
chr1	230894141	230894427	230894284	ENSG00000240502.2	+	misc_RNA	KNOWN	RN7SL837P	1	1	0.211044
chr1	230906243	230978875	230942559	ENSG00000143643.12	-	protein_coding	KNOWN	TTC13	9	23	0.045405
chr1	230978981	231000595	230989788	ENSG00000173409.13	+	protein_coding	KNOWN	ARV1	7	6	-0.071185
chr1	230988989	230989123	230989056	ENSG00000252131.1	-	miRNA	NOVEL	AL844165.1	1	1	-0.025502
chr1	231018958	231040246	231029602	ENSG00000182118.5	-	protein_coding	KNOWN	FAM89A	3	3	0.032138
chr1	231019828	231019924	231019876	ENSG00000221290.1	-	miRNA	KNOWN	MIR1182	1	1	-0.016384
chr1	231021611	231022183	231021897	ENSG00000227934.1	+	processed_pseudogene	KNOWN	RP11-423F24.3	1	1	-0.016384
chr1	231117831	231118325	231118078	ENSG00000229595.1	-	processed_pseudogene	KNOWN	RP5-1097F14.1	1	1	-0.172655
chr1	231162112	231221556	231191834	ENSG00000119283.15	+	protein_coding	KNOWN	TRIM67	3	12	0.036506
chr1	231184098	231187627	231185862	ENSG00000235710.4	-	antisense	KNOWN	RP5-1097F14.3	1	3	-0.370980
chr1	231223763	231241187	231232475	ENSG00000143633.12	-	protein_coding	KNOWN	C1orf131	8	7	0.073953
chr1	231241207	231277973	231259590	ENSG00000116906.11	+	protein_coding	KNOWN	GNPAT	5	16	-0.213158
chr1	231281414	231281524	231281469	ENSG00000222407.1	-	rRNA	KNOWN	RNA5SP80	1	1	-0.415350
chr1	231332753	231337852	231335302	ENSG00000116903.7	-	protein_coding	KNOWN	EXOC8	1	1	-0.100653
chr1	231337104	231355023	231346063	ENSG00000010072.15	+	protein_coding	KNOWN	SPRTN	6	6	-0.131703
chr1	231363751	231425044	231394397	ENSG00000135766.8	-	protein_coding	KNOWN	EGLN1	2	5	-0.148350
chr1	231475956	231476288	231476122	ENSG00000223982.3	-	processed_pseudogene	KNOWN	SNRPD2P2	1	1	-0.294425
chr1	231522388	231528556	231525472	ENSG00000233461.5	-	antisense	KNOWN	RP11-295G20.2	5	4	-0.206232
chr1	231528653	231566524	231547588	ENSG00000116918.13	+	protein_coding	KNOWN	TSNAX	5	6	-0.234542
chr1	231528653	231819244	231673948	ENSG00000270106.5	+	protein_coding	KNOWN	TSNAX-DISC1	5	14	-0.182210
chr1	231591292	231612090	231601691	ENSG00000229228.1	-	antisense	KNOWN	LINC00582	1	2	-0.101656
chr1	231626815	232041272	231834043	ENSG00000162946.20	+	protein_coding	KNOWN	DISC1	23	13	-0.246767
chr1	231670635	231670750	231670692	ENSG00000222986.1	+	snRNA	KNOWN	RNU5A-5P	1	1	-0.429174
chr1	231814982	231815186	231815084	ENSG00000274121.1	+	misc_RNA	NOVEL	DISC2	1	1	-0.276934
chr1	231925834	231945233	231935533	ENSG00000226758.1	+	sense_intronic	KNOWN	DISC1-IT1	1	4	-0.277955
chr1	232160091	232185643	232172867	ENSG00000235152.1	+	lincRNA	KNOWN	RP5-865N13.2	1	3	-0.178314
chr1	232174932	232180113	232177522	ENSG00000236372.1	-	lincRNA	KNOWN	RP5-865N13.1	1	2	-0.270578
chr1	232221938	232222174	232222056	ENSG00000224436.1	-	processed_pseudogene	KNOWN	RP11-284L19.1	1	1	-0.158415
chr1	232222866	232223145	232223005	ENSG00000242794.2	+	misc_RNA	KNOWN	RN7SL299P	1	1	-0.158415
chr1	232223059	232223141	232223100	ENSG00000281475.1	+	miRNA	NOVEL	BX323014.1	1	1	-0.158415
chr1	232397965	232561558	232479761	ENSG00000116991.10	-	protein_coding	KNOWN	SIPA1L2	6	22	-0.329955
chr1	232700204	232700308	232700256	ENSG00000238382.1	+	snRNA	KNOWN	RNU6-1211P	1	1	0.016704
chr1	232718071	232722250	232720160	ENSG00000225919.1	+	lincRNA	KNOWN	RP11-66A2.1	1	3	-0.370980
chr1	232727254	232742715	232734984	ENSG00000236497.1	-	lincRNA	KNOWN	RP11-66A2.2	1	4	-0.378890
chr1	232804892	232808407	232806649	ENSG00000212916.4	+	protein_coding	KNOWN	MAP10	1	1	-0.409313
chr1	232832017	232832187	232832102	ENSG00000206835.1	-	snRNA	KNOWN	RNU1-74P	1	1	-0.386929
chr1	232898914	232898999	232898956	ENSG00000273857.1	+	miRNA	NOVEL	AL122003.1	1	1	-0.044745
chr1	232917235	232918018	232917626	ENSG00000232175.1	+	processed_pseudogene	KNOWN	RP4-659I19.1	1	1	-0.075736
chr1	232950605	232983882	232967243	ENSG00000135778.11	+	protein_coding	KNOWN	NTPCR	8	5	-0.222295
chr1	232983435	233295713	233139574	ENSG00000135749.18	-	protein_coding	KNOWN	PCNXL2	23	34	-0.194776
chr1	233288868	233289447	233289157	ENSG00000231940.1	-	processed_pseudogene	KNOWN	RPS7P3	1	1	-0.328012
chr1	233295325	233295727	233295526	ENSG00000251508.1	-	unprocessed_pseudogene	KNOWN	RP5-862P8.3	1	2	-0.107617
chr1	233327768	233385148	233356458	ENSG00000143674.10	+	protein_coding	KNOWN	RP5-862P8.2	3	10	-0.409896
chr1	233448626	233448781	233448703	ENSG00000252501.1	-	snRNA	KNOWN	RNU4-77P	1	1	-0.730010
chr1	233614004	233672512	233643258	ENSG00000135750.14	+	protein_coding	KNOWN	KCNK1	6	6	-0.471832
chr1	233624152	233624219	233624185	ENSG00000265744.1	+	miRNA	KNOWN	MIR4427	1	1	-0.277242
chr1	233836080	233836432	233836256	ENSG00000225486.1	-	processed_pseudogene	KNOWN	RP11-301G21.1	1	1	-0.567421
chr1	233904933	234324516	234114724	ENSG00000183780.12	+	protein_coding	KNOWN	SLC35F3	2	8	-0.289337
chr1	234026851	234027227	234027039	ENSG00000236101.1	-	processed_pseudogene	KNOWN	RAC1P7	1	1	-0.416705
chr1	234212606	234215088	234213847	ENSG00000233332.1	-	antisense	KNOWN	RP4-799P18.2	1	2	-0.355467
chr1	234261706	234274465	234268085	ENSG00000231272.1	+	sense_intronic	KNOWN	RP4-799P18.4	1	2	-0.114161
chr1	234268583	234272500	234270541	ENSG00000236244.1	-	antisense	KNOWN	RP4-799P18.3	1	2	-0.112156
chr1	234284972	234285541	234285256	ENSG00000232166.1	+	processed_pseudogene	KNOWN	RP4-799P18.5	1	1	-0.109642
chr1	234306467	234306539	234306503	ENSG00000264377.1	+	miRNA	KNOWN	MIR4671	1	1	-0.112828
chr1	234356704	234357141	234356922	ENSG00000235605.1	-	processed_pseudogene	KNOWN	RP5-827C21.1	1	1	-0.470251
chr1	234357006	234365828	234361417	ENSG00000236358.1	+	antisense	KNOWN	RP5-827C21.2	1	2	-0.470251
chr1	234372186	234372811	234372498	ENSG00000273367.1	+	antisense	KNOWN	RP5-827C21.6	1	1	-0.320790
chr1	234372807	234373593	234373200	ENSG00000231663.1	-	antisense	KNOWN	RP5-827C21.4	1	2	-0.320790
chr1	234373456	234384049	234378752	ENSG00000168275.14	+	protein_coding	KNOWN	COA6	4	3	-0.320790
chr1	234391313	234479103	234435208	ENSG00000059588.9	-	protein_coding	KNOWN	TARBP1	9	30	-0.235164
chr1	234527891	234531779	234529835	ENSG00000231768.1	-	lincRNA	KNOWN	LINC01354	2	3	0.077555
chr1	234565298	234570088	234567693	ENSG00000230404.1	+	lincRNA	KNOWN	RP5-855F14.2	1	2	0.402549
chr1	234593275	234593402	234593338	ENSG00000212144.1	+	snoRNA	NOVEL	U8	1	1	0.188207
chr1	234604269	234609525	234606897	ENSG00000168264.10	-	protein_coding	KNOWN	IRF2BP2	3	2	0.188207
chr1	234607008	234609483	234608245	ENSG00000228830.1	+	antisense	KNOWN	RP4-781K5.2	1	2	0.188207
chr1	234629311	234634780	234632045	ENSG00000224939.1	+	lincRNA	KNOWN	LINC00184	1	2	0.154615
chr1	234644666	234647571	234646118	ENSG00000272362.1	+	lincRNA	KNOWN	RP4-781K5.9	1	2	0.161254
chr1	234646289	234683176	234664732	ENSG00000228044.2	+	lincRNA	KNOWN	RP4-781K5.4	3	4	-0.007604
chr1	234660271	234667104	234663687	ENSG00000241475.1	+	lincRNA	KNOWN	RP4-781K5.5	1	3	0.028798
chr1	234669523	234696153	234682838	ENSG00000230628.1	-	lincRNA	KNOWN	RP4-781K5.6	1	2	-0.156530
chr1	234709383	234720220	234714801	ENSG00000282097.1	+	lincRNA	KNOWN	RP4-781K5.7	1	4	0.108356
chr1	234724042	234731643	234727842	ENSG00000227630.2	+	lincRNA	KNOWN	LINC01132	1	3	0.142041
chr1	234757621	234760056	234758838	ENSG00000279261.1	-	protein_coding	KNOWN	AL360294.1	1	1	0.273018
chr1	234837976	234838069	234838022	ENSG00000201638.2	+	misc_RNA	KNOWN	RNY4P16	1	1	0.135713
chr1	234904186	234904488	234904337	ENSG00000239690.3	+	misc_RNA	KNOWN	RN7SL668P	1	1	0.486851
chr1	234957231	234959989	234958610	ENSG00000237520.1	+	lincRNA	KNOWN	RP11-443B7.2	1	2	0.212286
chr1	234957342	234970062	234963702	ENSG00000238005.2	-	lincRNA	KNOWN	RP11-443B7.1	5	4	0.211488
chr1	234979647	234980804	234980225	ENSG00000258082.1	-	lincRNA	KNOWN	RP11-443B7.3	1	2	0.051120
chr1	235065479	235074220	235069849	ENSG00000280587.1	-	lincRNA	KNOWN	LINC01348	1	3	0.307435
chr1	235097187	235097412	235097299	ENSG00000233018.1	-	processed_pseudogene	KNOWN	RP4-597N16.1	1	1	0.337644
chr1	235104180	235104609	235104394	ENSG00000273416.1	-	lincRNA	KNOWN	RP4-597N16.4	1	1	0.337644
chr1	235109336	235128936	235119136	ENSG00000173726.10	-	protein_coding	KNOWN	TOMM20	3	5	0.170993
chr1	235127803	235127937	235127870	ENSG00000207181.1	-	snoRNA	KNOWN	SNORA14B	1	1	0.165158
chr1	235131183	235161457	235146320	ENSG00000188739.14	-	protein_coding	KNOWN	RBM34	10	11	0.288916
chr1	235131634	235328219	235229926	ENSG00000054267.20	-	protein_coding	KNOWN	ARID4B	13	25	0.128636
chr1	235190034	235190116	235190075	ENSG00000263439.1	-	miRNA	KNOWN	MIR4753	1	1	-0.000520
chr1	235245866	235245955	235245910	ENSG00000280869.1	-	miRNA	NOVEL	AL391994.1	1	1	0.185651
chr1	235295865	235296335	235296100	ENSG00000236863.2	+	processed_pseudogene	KNOWN	RPL23AP23	1	1	0.215374
chr1	235327350	235344532	235335941	ENSG00000152904.11	+	protein_coding	KNOWN	GGPS1	8	4	0.240852
chr1	235336806	235337087	235336946	ENSG00000227962.1	+	processed_pseudogene	KNOWN	RP11-382D8.3	1	1	0.246569
chr1	235361153	235362540	235361846	ENSG00000230026.2	+	processed_pseudogene	KNOWN	RP11-382D8.5	1	1	0.057844
chr1	235367360	235448968	235408164	ENSG00000116957.12	+	protein_coding	KNOWN	TBCE	7	18	0.185420
chr1	235432985	235433231	235433108	ENSG00000229795.2	+	processed_pseudogene	KNOWN	RPS21P1	1	1	0.173522
chr1	235449923	235504481	235477202	ENSG00000162885.12	-	protein_coding	KNOWN	B3GALNT2	7	12	-0.052742
chr1	235519971	235520685	235520328	ENSG00000238236.1	+	processed_pseudogene	KNOWN	MTCYBP14	1	1	0.117083
chr1	235537520	235538041	235537780	ENSG00000235638.1	+	processed_pseudogene	KNOWN	MTND6P14	1	1	0.184603
chr1	235538052	235539845	235538948	ENSG00000231199.2	-	processed_pseudogene	KNOWN	MTND5P19	1	1	0.184603
chr1	235540053	235541415	235540734	ENSG00000226663.2	-	processed_pseudogene	KNOWN	MTND4P10	1	1	0.184603
chr1	235541412	235541706	235541559	ENSG00000231582.2	-	processed_pseudogene	KNOWN	MTND4LP21	1	1	0.184603
chr1	235541759	235542097	235541928	ENSG00000232714.1	-	processed_pseudogene	KNOWN	MTND3P8	1	1	0.184603
chr1	235542159	235542390	235542274	ENSG00000235761.2	-	processed_pseudogene	KNOWN	RP11-293G6__B.2	1	1	0.184603
chr1	235547687	235650754	235599220	ENSG00000168243.10	-	protein_coding	KNOWN	GNG4	5	4	0.146737
chr1	235565761	235566937	235566349	ENSG00000270710.1	+	processed_pseudogene	KNOWN	RP11-293G6__B.8	1	2	-0.019040
chr1	235614674	235616397	235615535	ENSG00000227236.2	+	processed_pseudogene	KNOWN	RP11-365D9.1	1	1	0.197786
chr1	235661041	235883640	235772340	ENSG00000143669.13	-	protein_coding	KNOWN	LYST	12	53	-0.015515
chr1	235738005	235738989	235738497	ENSG00000235674.2	+	processed_pseudogene	KNOWN	LDHAP2	1	1	-0.216958
chr1	235839483	235840182	235839832	ENSG00000229463.2	+	antisense	KNOWN	LYST-AS1	1	2	0.058243
chr1	235853000	235853060	235853030	ENSG00000222831.1	-	miRNA	KNOWN	MIR1537	1	1	-0.219668
chr1	235915415	235915521	235915468	ENSG00000206803.1	+	snRNA	KNOWN	RNU6-968P	1	1	0.200141
chr1	235942553	235943805	235943179	ENSG00000237845.1	-	lincRNA	KNOWN	RP5-940F7.2	1	2	0.282514
chr1	235957879	235971825	235964852	ENSG00000229291.1	-	lincRNA	KNOWN	RP4-580N22.2	1	2	0.191119
chr1	235975830	236065162	236020496	ENSG00000116962.14	-	protein_coding	KNOWN	NID1	2	20	-0.038481
chr1	236060677	236060772	236060724	ENSG00000252822.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.173820
chr1	236110061	236112370	236111215	ENSG00000235371.1	+	processed_pseudogene	KNOWN	RP4-764D2.1	1	1	0.234011
chr1	236142505	236221865	236182185	ENSG00000077585.13	+	protein_coding	KNOWN	GPR137B	5	7	-0.018207
chr1	236215555	236281985	236248770	ENSG00000086619.13	-	protein_coding	KNOWN	ERO1B	3	16	-0.410528
chr1	236267780	236267958	236267869	ENSG00000222650.1	+	snRNA	KNOWN	RNU2-70P	1	1	-0.484038
chr1	236285976	236286960	236286468	ENSG00000237922.1	-	processed_pseudogene	KNOWN	RP11-478H16.1	1	2	-0.323046
chr1	236348262	236484914	236416588	ENSG00000186197.12	+	protein_coding	KNOWN	EDARADD	3	8	-0.201609
chr1	236483165	236484468	236483816	ENSG00000244457.2	+	transcribed_processed_pseudogene	KNOWN	ENO1P1	1	1	-0.231846
chr1	236518000	236552981	236535490	ENSG00000116977.18	+	protein_coding	KNOWN	LGALS8	28	14	-0.118116
chr1	236523052	236524508	236523780	ENSG00000223776.5	-	antisense	KNOWN	LGALS8-AS1	2	1	-0.338312
chr1	236536162	236536704	236536433	ENSG00000273058.2	-	antisense	KNOWN	RP11-385F5.5	1	1	-0.001118
chr1	236540094	236550280	236545187	ENSG00000230325.1	-	antisense	KNOWN	RP11-385F5.4	1	2	-0.001550
chr1	236549005	236604504	236576754	ENSG00000119285.10	-	protein_coding	KNOWN	HEATR1	5	45	-0.039438
chr1	236686454	236764631	236725542	ENSG00000077522.12	+	protein_coding	KNOWN	ACTN2	7	23	-0.435196
chr1	236795281	236903981	236849631	ENSG00000116984.12	+	protein_coding	KNOWN	MTR	5	33	-0.310000
chr1	236819634	236820518	236820076	ENSG00000226498.2	+	transcribed_processed_pseudogene	KNOWN	RPSAP21	1	1	-0.403966
chr1	236981339	236981708	236981523	ENSG00000237991.3	+	processed_pseudogene	KNOWN	RPL35P1	1	1	-0.107946
chr1	237004103	237004418	237004260	ENSG00000244020.2	-	protein_coding	KNOWN	MT1HL1	1	1	-0.187582
chr1	237042205	237833988	237438096	ENSG00000198626.15	+	protein_coding	KNOWN	RYR2	7	105	-0.478279
chr1	237120807	237121109	237120958	ENSG00000252396.1	+	misc_RNA	KNOWN	RN7SKP195	1	1	0.026403
chr1	237471119	237471191	237471155	ENSG00000266262.1	+	miRNA	KNOWN	MIR4428	1	1	-0.634147
chr1	237555040	237555171	237555105	ENSG00000252290.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.662896
chr1	237862175	237928321	237895248	ENSG00000237250.3	+	antisense	KNOWN	RP11-193H5.1	1	12	-0.339538
chr1	237877864	237890922	237884393	ENSG00000116996.9	-	protein_coding	KNOWN	ZP4	2	13	-0.510919
chr1	237926831	237927605	237927218	ENSG00000243781.1	+	transcribed_processed_pseudogene	KNOWN	RP11-193H5.2	1	1	-0.390160
chr1	237943724	237945275	237944499	ENSG00000270188.1	-	protein_coding	KNOWN	MTRNR2L11	1	1	-0.253783
chr1	237948017	237949143	237948580	ENSG00000232154.2	-	processed_pseudogene	KNOWN	MTCYBP15	1	1	-0.253783
chr1	237949214	237949734	237949474	ENSG00000225723.1	+	processed_pseudogene	KNOWN	MTND6P15	1	1	-0.253783
chr1	237949736	237951536	237950636	ENSG00000227860.1	-	processed_pseudogene	KNOWN	MTND5P18	1	1	-0.205027
chr1	238107736	238108567	238108151	ENSG00000230019.1	-	processed_pseudogene	KNOWN	YWHAQP9	1	2	-0.626988
chr1	238268494	238268595	238268544	ENSG00000232989.1	-	processed_pseudogene	KNOWN	RP11-136B18.1	1	1	-0.380077
chr1	238276037	238287016	238281526	ENSG00000234464.1	+	lincRNA	KNOWN	RP11-136B18.2	1	2	-0.629292
chr1	238325687	238325788	238325737	ENSG00000252371.1	-	snRNA	KNOWN	RNU6-725P	1	1	-0.300326
chr1	238480384	238486023	238483203	ENSG00000215808.2	-	lincRNA	KNOWN	LINC01139	1	2	-0.416705
chr1	238485445	238538305	238511875	ENSG00000231877.1	+	lincRNA	KNOWN	RP11-177F15.1	1	4	-0.401041
chr1	238491358	238492644	238492001	ENSG00000215149.3	+	processed_pseudogene	KNOWN	KRT18P32	1	1	-0.455496
chr1	238777049	238779200	238778124	ENSG00000224783.1	-	processed_pseudogene	KNOWN	MIPEPP2	1	2	-0.551864
chr1	239052748	239052903	239052825	ENSG00000227854.1	-	processed_pseudogene	KNOWN	RP11-307O1.1	1	1	-0.149766
chr1	239247808	239250818	239249313	ENSG00000259776.1	-	lincRNA	KNOWN	RP11-544D21.2	1	1	-0.738448
chr1	239386565	239915452	239651008	ENSG00000133019.11	+	protein_coding	KNOWN	CHRM3	7	9	-0.462281
chr1	239703381	239730465	239716923	ENSG00000233355.6	-	antisense	KNOWN	CHRM3-AS2	9	5	-0.540031
chr1	239898016	239899872	239898944	ENSG00000234601.1	-	antisense	KNOWN	CHRM3-AS1	1	2	-0.300793
chr1	239915439	239916955	239916197	ENSG00000231979.1	-	lincRNA	KNOWN	RP11-35L17.3	1	2	-0.430155
chr1	239972787	239974245	239973516	ENSG00000215805.3	+	processed_pseudogene	KNOWN	RP11-438O11.1	1	1	-0.085546
chr1	240012646	240013226	240012936	ENSG00000217327.3	+	processed_pseudogene	KNOWN	RPS7P5	1	1	-0.318292
chr1	240014348	240475189	240244768	ENSG00000155816.19	+	protein_coding	KNOWN	FMN2	7	18	-0.024640
chr1	240142670	240145389	240144029	ENSG00000228818.1	-	processed_pseudogene	KNOWN	RP11-567G24.1	1	1	-0.011102
chr1	240154651	240154772	240154711	ENSG00000202041.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.270530
chr1	240170155	240171291	240170723	ENSG00000223694.1	+	processed_pseudogene	KNOWN	ADH5P3	1	1	-0.099489
chr1	240177839	240179644	240178741	ENSG00000233735.5	-	antisense	KNOWN	RP11-567G24.3	2	3	-0.099489
chr1	240341385	240341477	240341431	ENSG00000252317.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.060960
chr1	240400671	240401123	240400897	ENSG00000233519.1	-	antisense	KNOWN	RP11-177F11.1	1	2	0.053518
chr1	240489573	240612149	240550861	ENSG00000180875.4	-	protein_coding	KNOWN	GREM2	1	2	-0.076916
chr1	240530452	240530862	240530657	ENSG00000224359.2	+	antisense	KNOWN	RP11-467I20.2	1	2	-0.143386
chr1	240549867	240550378	240550122	ENSG00000226014.1	-	processed_pseudogene	KNOWN	RP11-467I20.4	1	2	-0.229145
chr1	240588522	240590748	240589635	ENSG00000231440.1	-	sense_intronic	KNOWN	RP11-467I20.6	1	2	-0.045082
chr1	240636599	240637052	240636825	ENSG00000228844.1	-	processed_pseudogene	KNOWN	RP11-467I20.3	1	1	-0.028638
chr1	240653367	240653477	240653422	ENSG00000251750.1	+	snRNA	KNOWN	RNU5F-8P	1	1	0.125544
chr1	240654241	240654625	240654433	ENSG00000234872.2	+	processed_pseudogene	KNOWN	RP11-467I20.5	1	1	0.125544
chr1	240698320	240698429	240698374	ENSG00000199241.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.023485
chr1	240739419	240739853	240739636	ENSG00000230015.3	-	lincRNA	KNOWN	RP11-80B9.4	1	1	0.218440
chr1	240765557	240768680	240767118	ENSG00000226919.1	+	antisense	KNOWN	RP11-80B9.1	1	2	-0.270578
chr1	240769420	240771534	240770477	ENSG00000223963.2	-	processed_pseudogene	KNOWN	PRKRIRP8	1	1	-0.126030
chr1	240775514	241357230	241066372	ENSG00000182901.15	-	protein_coding	KNOWN	RGS7	8	18	-0.367716
chr1	240823006	240823433	240823219	ENSG00000215802.3	-	transcribed_processed_pseudogene	KNOWN	RFKP1	1	1	-0.520083
chr1	240919653	240920609	240920131	ENSG00000233615.1	+	processed_pseudogene	KNOWN	HNRNPA1P42	1	1	-0.573825
chr1	240998451	240998794	240998622	ENSG00000238085.1	-	processed_pseudogene	KNOWN	RP11-435F13.2	1	1	-0.362910
chr1	241132272	241132346	241132309	ENSG00000265831.1	+	miRNA	KNOWN	MIR3123	1	1	-0.267089
chr1	241305580	241305882	241305731	ENSG00000224348.2	-	processed_pseudogene	KNOWN	RP11-306K13.1	1	1	-0.504845
chr1	241424292	241433492	241428892	ENSG00000225554.1	+	lincRNA	KNOWN	RP11-527D7.1	2	3	-0.241979
chr1	241497603	241519761	241508682	ENSG00000091483.6	-	protein_coding	KNOWN	FH	3	10	-0.137831
chr1	241532134	241595642	241563888	ENSG00000117009.11	+	protein_coding	KNOWN	KMO	10	15	-0.359551
chr1	241590102	241677376	241633739	ENSG00000054277.12	-	protein_coding	KNOWN	OPN3	6	5	-0.269638
chr1	241628853	241635930	241632391	ENSG00000203668.1	-	protein_coding	KNOWN	CHML	1	1	-0.316191
chr1	241652278	241802133	241727205	ENSG00000162843.17	+	protein_coding	KNOWN	WDR64	8	27	-0.280292
chr1	241831935	241832787	241832361	ENSG00000229022.1	+	processed_pseudogene	KNOWN	RP11-553N16.1	1	1	-0.164784
chr1	241847967	241895148	241871557	ENSG00000174371.16	+	protein_coding	KNOWN	EXO1	12	16	-0.361669
chr1	241916123	241916543	241916333	ENSG00000235990.2	+	processed_pseudogene	KNOWN	RPL23AP20	1	1	-0.215742
chr1	241957767	241959062	241958414	ENSG00000196289.7	+	protein_coding	KNOWN	BECN2	1	1	-0.142473
chr1	241993185	241993682	241993433	ENSG00000213026.4	+	processed_pseudogene	KNOWN	CFL1P4	1	1	-0.029472
chr1	241995490	241999073	241997281	ENSG00000197769.5	-	protein_coding	KNOWN	MAP1LC3C	1	4	-0.029472
chr1	242023949	242024054	242024001	ENSG00000223119.1	-	snRNA	KNOWN	RNU6-1139P	1	1	-0.355467
chr1	242057085	242060242	242058663	ENSG00000224625.2	+	unprocessed_pseudogene	KNOWN	TUBB8P6	1	4	-0.314825
chr1	242060490	242062595	242061542	ENSG00000277099.1	-	unprocessed_pseudogene	KNOWN	FAM166AP1	1	6	-0.314825
chr1	242082986	242524696	242303841	ENSG00000180287.16	-	protein_coding	KNOWN	PLD5	8	11	-0.418092
chr1	242134272	242134381	242134326	ENSG00000222120.1	+	rRNA	KNOWN	RNA5SP81	1	1	-0.508652
chr1	242147514	242209129	242178321	ENSG00000272865.1	+	antisense	KNOWN	RP11-561I11.4	1	5	-0.416575
chr1	242188647	242188789	242188718	ENSG00000252084.1	-	misc_RNA	KNOWN	RN7SKP12	1	1	-0.259174
chr1	242203555	242210827	242207191	ENSG00000224525.2	+	antisense	KNOWN	RP11-561I11.3	1	3	-0.211827
chr1	242345558	242345718	242345638	ENSG00000226750.1	+	unprocessed_pseudogene	KNOWN	RP11-513D4.3	1	1	-0.361726
chr1	242365189	242365822	242365505	ENSG00000235467.1	+	processed_pseudogene	KNOWN	RPL10AP5	1	1	-0.179310
chr1	242376923	242377432	242377177	ENSG00000213690.3	-	processed_pseudogene	KNOWN	RP11-513D4.1	1	1	-0.647481
chr1	242671140	242671576	242671358	ENSG00000270859.1	+	processed_pseudogene	KNOWN	RP11-435I3.1	1	1	-0.235894
chr1	242772620	242773103	242772861	ENSG00000215800.2	+	processed_pseudogene	KNOWN	RSL24D1P4	1	1	-0.580967
chr1	242882066	242883475	242882770	ENSG00000270818.1	-	processed_pseudogene	KNOWN	RP11-498M14.1	1	1	-0.060011
chr1	242890247	242890803	242890525	ENSG00000277704.1	+	processed_pseudogene	KNOWN	RP11-498M14.2	1	1	-0.492971
chr1	242975005	242975084	242975044	ENSG00000230199.1	+	processed_pseudogene	KNOWN	RP11-331N16.1	1	1	-0.242798
chr1	243005845	243007468	243006656	ENSG00000234116.1	-	lincRNA	KNOWN	RP11-261C10.1	1	3	0.047598
chr1	243029512	243052252	243040882	ENSG00000231512.5	-	lincRNA	KNOWN	LINC01347	4	3	-0.458309
chr1	243047698	243047875	243047786	ENSG00000282831.1	-	transcribed_unprocessed_pseudogene	KNOWN	SEPT14P21	1	1	-0.511781
chr1	243049782	243051619	243050700	ENSG00000278455.1	+	processed_pseudogene	KNOWN	RP11-261C10.8	1	1	-0.110466
chr1	243054861	243056394	243055627	ENSG00000253326.2	-	processed_pseudogene	KNOWN	RP11-261C10.7	1	2	-0.056710
chr1	243056307	243101744	243079025	ENSG00000214837.8	-	transcribed_unprocessed_pseudogene	KNOWN	LINC01347	2	18	-0.097507
chr1	243081156	243081259	243081207	ENSG00000212230.1	-	snRNA	KNOWN	RNU6-747P	1	1	-0.189640
chr1	243124428	243255348	243189888	ENSG00000143702.15	-	protein_coding	KNOWN	CEP170	25	20	-0.337514
chr1	243135898	243140588	243138243	ENSG00000227230.1	+	antisense	KNOWN	RP11-261C10.5	1	2	-0.536752
chr1	243164638	243169445	243167041	ENSG00000232085.1	+	antisense	KNOWN	RP11-261C10.4	2	3	-0.379832
chr1	243256034	243500092	243378063	ENSG00000054282.15	+	protein_coding	KNOWN	SDCCAG8	11	18	-0.121510
chr1	243267257	243268119	243267688	ENSG00000224727.1	-	processed_pseudogene	KNOWN	FCF1P7	1	2	0.199572
chr1	243346176	243346255	243346215	ENSG00000265201.1	+	miRNA	KNOWN	MIR4677	1	1	-0.141498
chr1	243488233	243851079	243669656	ENSG00000117020.16	-	protein_coding	KNOWN	AKT3	10	14	-0.224880
chr1	243545532	243548329	243546930	ENSG00000236031.1	+	antisense	KNOWN	RP11-269F20.1	1	3	-0.280920
chr1	243624666	243625056	243624861	ENSG00000226766.1	-	processed_pseudogene	KNOWN	FABP7P1	1	1	-0.317263
chr1	243702857	243740821	243721839	ENSG00000232184.1	-	sense_intronic	KNOWN	RP11-370K11.1	1	3	-0.364119
chr1	243793205	243794400	243793802	ENSG00000228939.1	-	sense_intronic	KNOWN	AKT3-IT1	1	2	-0.072544
chr1	243917402	244047317	243982359	ENSG00000226828.1	+	lincRNA	KNOWN	RP11-278H7.1	1	12	0.033517
chr1	244048939	244057476	244053207	ENSG00000179456.10	+	protein_coding	KNOWN	ZBTB18	2	2	-0.015925
chr1	244064330	244067909	244066119	ENSG00000279774.1	+	TEC	KNOWN	RP11-278H7.5	1	1	0.003861
chr1	244068820	244093026	244080923	ENSG00000229960.1	-	lincRNA	KNOWN	RP11-278H7.4	1	5	0.044849
chr1	244103932	244104210	244104071	ENSG00000244066.3	+	misc_RNA	KNOWN	RN7SL148P	1	1	0.187675
chr1	244107365	244109011	244108188	ENSG00000237759.1	+	lincRNA	KNOWN	RP11-278H7.3	1	2	0.187675
chr1	244352635	244389663	244371149	ENSG00000173728.10	+	protein_coding	KNOWN	C1orf100	4	5	0.098334
chr1	244375100	244409592	244392346	ENSG00000240963.1	-	antisense	KNOWN	RP11-518L10.5	1	4	0.068184
chr1	244394976	244395660	244395318	ENSG00000225401.2	-	processed_pseudogene	KNOWN	TGIF2P1	1	1	-0.087642
chr1	244408494	244452134	244430314	ENSG00000035687.9	-	protein_coding	KNOWN	ADSS	3	13	-0.266565
chr1	244454377	244641177	244547777	ENSG00000179397.17	+	protein_coding	KNOWN	C1orf101	10	22	-0.200907
chr1	244589546	244589644	244589595	ENSG00000238952.1	-	miRNA	NOVEL	AC099757.1	1	1	-0.044581
chr1	244598391	244598687	244598539	ENSG00000227735.1	-	processed_pseudogene	KNOWN	CYCSP5	1	1	-0.234112
chr1	244652935	244709033	244680984	ENSG00000121644.18	+	protein_coding	KNOWN	DESI2	4	5	-0.061725
chr1	244694432	244694720	244694576	ENSG00000232059.3	-	processed_pseudogene	KNOWN	RP11-173A6.2	1	1	0.060108
chr1	244731024	244731586	244731305	ENSG00000282317.1	+	lincRNA	KNOWN	RP11-173A6.3	1	1	0.526569
chr1	244835322	244845057	244840189	ENSG00000203667.9	+	protein_coding	KNOWN	COX20	5	5	0.364071
chr1	244840638	244846903	244843770	ENSG00000188206.6	-	antisense	KNOWN	HNRNPU-AS1	1	2	0.364071
chr1	244845167	244855497	244850332	ENSG00000277877.4	-	protein_coding	KNOWN	RP11-11N7.5	2	5	0.031857
chr1	244851166	244864542	244857854	ENSG00000153187.16	-	protein_coding	KNOWN	HNRNPU	8	14	-0.260114
chr1	244864738	244865272	244865005	ENSG00000273175.1	+	lincRNA	KNOWN	RP11-11N7.4	1	1	-0.260114
chr1	244943910	244944216	244944063	ENSG00000201758.1	+	misc_RNA	KNOWN	RN7SKP55	1	1	-0.022778
chr1	244954858	244954963	244954910	ENSG00000252073.1	+	snRNA	KNOWN	RNU6-947P	1	1	-0.174288
chr1	244969350	244971088	244970219	ENSG00000272195.1	-	antisense	KNOWN	RP11-156E8.1	1	1	0.050278
chr1	244969705	245127164	245048434	ENSG00000203666.12	+	protein_coding	KNOWN	EFCAB2	16	8	0.082086
chr1	245023015	245023118	245023066	ENSG00000252282.1	+	snRNA	KNOWN	RNU6-1089P	1	1	-0.174402
chr1	245043928	245044032	245043980	ENSG00000251754.1	+	snRNA	KNOWN	RNU6-999P	1	1	-0.054557
chr1	245123471	245124450	245123960	ENSG00000223353.2	-	processed_pseudogene	KNOWN	RP11-290P14.2	1	2	0.222576
chr1	245133927	245134090	245134008	ENSG00000201170.1	-	snRNA	KNOWN	RNU1-132P	1	1	0.115451
chr1	245154985	245709431	245432208	ENSG00000162849.15	+	protein_coding	KNOWN	KIF26B	4	15	0.166024
chr1	245206444	245234501	245220472	ENSG00000232192.1	-	antisense	KNOWN	RP11-62I21.1	1	5	0.174138
chr1	245282831	245283089	245282960	ENSG00000232793.2	-	processed_pseudogene	KNOWN	DNAJC19P8	1	1	0.316865
chr1	245370334	245370419	245370376	ENSG00000221165.1	+	miRNA	NOVEL	AL359983.1	1	1	0.176205
chr1	245614773	245615145	245614959	ENSG00000238224.1	-	antisense	KNOWN	RP11-522M21.2	1	2	0.513693
chr1	245673732	245676478	245675105	ENSG00000231612.1	-	antisense	KNOWN	RP11-522M21.3	1	2	0.115708
chr1	245749342	246507312	246128327	ENSG00000185420.18	-	protein_coding	KNOWN	SMYD3	18	12	-0.067996
chr1	246025897	246035603	246030750	ENSG00000235096.2	+	antisense	KNOWN	RP11-83A16.1	1	3	0.105094
chr1	246108626	246113866	246111246	ENSG00000226876.2	+	antisense	KNOWN	RP11-36N20.1	1	4	-0.060165
chr1	246178778	246179204	246178991	ENSG00000225222.2	+	processed_pseudogene	KNOWN	CHCHD4P5	1	1	-0.169593
chr1	246189014	246189118	246189066	ENSG00000202184.1	-	snRNA	KNOWN	RNU6-1283P	1	1	-0.169593
chr1	246321663	246322438	246322050	ENSG00000230184.1	-	sense_intronic	KNOWN	SMYD3-IT1	1	2	-0.344107
chr1	246426006	246426119	246426062	ENSG00000207326.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.020708
chr1	246509038	246522592	246515815	ENSG00000227728.2	-	unprocessed_pseudogene	KNOWN	RP11-690C23.4	1	14	0.532534
chr1	246516039	246524287	246520163	ENSG00000242042.1	-	lincRNA	KNOWN	RP11-690C23.2	1	3	0.570039
chr1	246527030	246528155	246527592	ENSG00000230813.1	+	unprocessed_pseudogene	KNOWN	RP11-690C23.5	1	2	0.570039
chr1	246528562	246528841	246528701	ENSG00000229112.1	-	unprocessed_pseudogene	KNOWN	RP11-690C23.3	1	1	0.570039
chr1	246540560	246566324	246553442	ENSG00000162851.7	-	protein_coding	KNOWN	TFB2M	1	8	0.138858
chr1	246566444	246668584	246617514	ENSG00000162852.13	+	protein_coding	KNOWN	CNST	4	11	0.124591
chr1	246605873	246608102	246606987	ENSG00000225300.1	+	sense_intronic	KNOWN	RP11-1086F11.1	1	2	0.152428
chr1	246632251	246632478	246632364	ENSG00000228955.2	-	processed_pseudogene	KNOWN	RP11-452J6.2	1	2	0.069272
chr1	246682108	246685075	246683591	ENSG00000260698.1	+	lincRNA	KNOWN	RP11-439E19.9	1	1	0.091992
chr1	246690047	246691821	246690934	ENSG00000235021.1	+	lincRNA	KNOWN	RP11-439E19.7	1	2	0.275438
chr1	246724047	246768137	246746092	ENSG00000143653.9	+	protein_coding	KNOWN	SCCPDH	1	12	0.033496
chr1	246755511	246755832	246755671	ENSG00000228879.1	-	processed_pseudogene	KNOWN	RP11-439E19.6	1	1	0.027141
chr1	246771837	246830059	246800948	ENSG00000223519.7	-	unitary_pseudogene	KNOWN	KIF28P	3	22	0.263604
chr1	246772301	246775772	246774036	ENSG00000260855.1	+	antisense	KNOWN	RP11-439E19.10	1	1	-0.272581
chr1	246776013	246792385	246784199	ENSG00000227953.6	+	processed_transcript	KNOWN	LINC01341	5	6	-0.131711
chr1	246818076	246818180	246818128	ENSG00000235386.1	+	unprocessed_pseudogene	KNOWN	RP11-397A15.4	1	1	0.321779
chr1	246833448	246833529	246833488	ENSG00000252011.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.299838
chr1	246839098	246931978	246885538	ENSG00000153207.14	-	protein_coding	KNOWN	AHCTF1	7	36	-0.277885
chr1	246945547	247008093	246976820	ENSG00000197472.14	-	protein_coding	KNOWN	ZNF695	6	6	-0.294340
chr1	246945547	247078811	247012179	ENSG00000135747.11	-	protein_coding	KNOWN	ZNF670-ZNF695	2	7	-0.305455
chr1	247015068	247017291	247016179	ENSG00000236775.1	+	processed_pseudogene	KNOWN	RP11-551G24.3	1	2	-0.190647
chr1	247036784	247078755	247057769	ENSG00000277462.1	-	protein_coding	KNOWN	ZNF670	1	4	-0.353958
chr1	247042791	247044021	247043406	ENSG00000215796.3	+	processed_pseudogene	KNOWN	RP11-551G24.2	1	1	-0.420458
chr1	247085389	247086067	247085728	ENSG00000228982.1	-	unprocessed_pseudogene	KNOWN	RP11-107G24.3	1	2	-0.267089
chr1	247099962	247104372	247102167	ENSG00000188295.14	-	protein_coding	KNOWN	ZNF669	5	4	-0.369235
chr1	247110160	247112417	247111288	ENSG00000221953.5	-	lincRNA	KNOWN	C1orf229	1	1	0.211291
chr1	247119669	247120278	247119973	ENSG00000226164.2	+	processed_pseudogene	KNOWN	FGFR3P6	1	1	0.211291
chr1	247121975	247172016	247146995	ENSG00000196418.12	-	protein_coding	KNOWN	ZNF124	6	4	-0.010727
chr1	247175256	247175525	247175390	ENSG00000224014.1	+	processed_pseudogene	KNOWN	RP11-488L18.6	1	1	0.030591
chr1	247183813	247185482	247184647	ENSG00000215795.2	-	processed_pseudogene	KNOWN	RP11-488L18.3	1	1	0.030591
chr1	247187281	247188526	247187903	ENSG00000259865.1	-	lincRNA	KNOWN	RP11-488L18.10	1	1	0.030591
chr1	247189851	247210856	247200353	ENSG00000227671.4	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-488L18.4	4	4	-0.470554
chr1	247201967	247202060	247202013	ENSG00000263568.1	-	miRNA	KNOWN	MIR3916	1	1	-0.489179
chr1	247204570	247204661	247204615	ENSG00000252516.1	-	rRNA	KNOWN	RNA5SP82	1	1	-0.489179
chr1	247210691	247241823	247226257	ENSG00000232347.1	-	lincRNA	KNOWN	RP11-488L18.8	1	4	-0.136863
chr1	247229940	247231880	247230910	ENSG00000214144.3	+	processed_pseudogene	KNOWN	RP11-488L18.1	1	1	-0.159241
chr1	247236868	247237957	247237412	ENSG00000235818.3	-	processed_pseudogene	KNOWN	VN1R17P	1	1	-0.160395
chr1	247256072	247257143	247256607	ENSG00000197617.6	+	processed_pseudogene	KNOWN	VN1R5	1	1	-0.785151
chr1	247294835	247294941	247294888	ENSG00000202079.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.040593
chr1	247297412	247331846	247314629	ENSG00000162714.12	-	protein_coding	KNOWN	ZNF496	5	9	-0.015780
chr1	247416156	247449108	247432632	ENSG00000162711.16	+	protein_coding	KNOWN	NLRP3	8	11	0.130193
chr1	247451029	247451982	247451505	ENSG00000177535.7	-	protein_coding	KNOWN	OR2B11	1	1	-0.192462
chr1	247491068	247492147	247491607	ENSG00000203664.6	+	transcribed_unprocessed_pseudogene	KNOWN	OR2W5	2	1	-0.539857
chr1	247507058	247577690	247542374	ENSG00000169224.12	+	protein_coding	KNOWN	GCSAML	11	7	-0.495217
chr1	247524679	247526752	247525715	ENSG00000227135.1	-	antisense	KNOWN	GCSAML-AS1	1	2	-0.602794
chr1	247530132	247533839	247531985	ENSG00000196242.7	-	protein_coding	KNOWN	OR2C3	2	2	-0.461028
chr1	247565639	247640854	247603246	ENSG00000236817.5	-	antisense	KNOWN	RP11-978I15.10	2	3	-0.438117
chr1	247588360	247589313	247588836	ENSG00000177489.1	+	protein_coding	KNOWN	OR2G2	1	1	-0.351310
chr1	247605586	247606515	247606050	ENSG00000177476.3	+	protein_coding	KNOWN	OR2G3	1	1	-0.317652
chr1	247619643	247620570	247620106	ENSG00000198452.6	+	unprocessed_pseudogene	KNOWN	OR14L1P	1	1	-0.591035
chr1	247639749	247747062	247693405	ENSG00000235749.2	+	antisense	KNOWN	RP11-634B7.4	2	2	-0.436027
chr1	247666887	247667841	247667364	ENSG00000230411.1	+	unprocessed_pseudogene	KNOWN	OR3D1P	1	1	-0.372514
chr1	247672118	247673041	247672579	ENSG00000197437.3	-	protein_coding	KNOWN	OR13G1	1	1	-0.557676
chr1	247711813	247723764	247717788	ENSG00000239395.1	-	processed_transcript	KNOWN	RP11-634B7.5	2	3	-0.474355
chr1	247711829	247712755	247712292	ENSG00000169214.3	-	protein_coding	KNOWN	OR6F1	1	1	-0.474355
chr1	247723099	247724043	247723571	ENSG00000241128.1	-	protein_coding	KNOWN	OR14A2	1	1	-0.474355
chr1	247738615	247739559	247739087	ENSG00000153230.4	+	protein_coding	KNOWN	OR14K1	1	1	-0.325676
chr1	247757462	247758406	247757934	ENSG00000221888.3	-	protein_coding	KNOWN	OR1C1	1	1	-0.518966
chr1	247774910	247775836	247775373	ENSG00000228336.1	+	unitary_pseudogene	KNOWN	OR9H1P	1	1	-0.684502
chr1	247814800	247815729	247815264	ENSG00000196772.3	-	protein_coding	KNOWN	OR14A16	1	1	-0.797305
chr1	247827486	247828502	247827994	ENSG00000232908.3	+	processed_pseudogene	KNOWN	HSD17B7P1	1	1	-0.797305
chr1	247833349	247834288	247833818	ENSG00000230576.1	-	unprocessed_pseudogene	KNOWN	OR6R1P	1	1	-0.365357
chr1	247840928	247841896	247841412	ENSG00000197591.3	-	protein_coding	KNOWN	OR11L1	1	1	-0.365357
chr1	247857199	247878205	247867702	ENSG00000162722.8	+	protein_coding	KNOWN	TRIM58	1	6	-0.284932
chr1	247895587	247896531	247896059	ENSG00000238243.3	+	protein_coding	KNOWN	OR2W3	1	1	-0.239990
chr1	247921018	247921956	247921487	ENSG00000177462.6	+	protein_coding	KNOWN	OR2T8	1	1	-0.291712
chr1	247933769	247934755	247934262	ENSG00000177275.3	+	protein_coding	KNOWN	OR2AJ1	1	1	-0.528890
chr1	247936061	247937513	247936787	ENSG00000226191.3	-	processed_pseudogene	KNOWN	CLK3P2	1	1	-0.528890
chr1	247937191	248100922	248019056	ENSG00000196071.3	+	protein_coding	KNOWN	OR2L13	2	3	-0.496507
chr1	247938973	247939659	247939316	ENSG00000224830.2	+	unprocessed_pseudogene	KNOWN	OR2X1P	1	1	-0.528890
chr1	247948858	247949796	247949327	ENSG00000196936.3	+	protein_coding	KNOWN	OR2L8	1	1	-0.528890
chr1	247948858	247949796	247949327	ENSG00000279263.1	+	polymorphic_pseudogene	KNOWN	OR2L8	1	1	-0.528890
chr1	247965233	247966339	247965786	ENSG00000187080.7	+	protein_coding	KNOWN	OR2AK2	1	1	-0.747968
chr1	247974741	247975653	247975197	ENSG00000237492.1	+	unprocessed_pseudogene	KNOWN	OR2L9P	1	1	-0.225623
chr1	247990267	247991204	247990735	ENSG00000224227.2	+	unprocessed_pseudogene	KNOWN	OR2L1P	1	1	-0.622387
chr1	247997000	247997096	247997048	ENSG00000199442.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.622387
chr1	248003129	248004068	248003598	ENSG00000232215.2	+	unprocessed_pseudogene	KNOWN	OR2L6P	1	1	-0.622387
chr1	248021948	248022886	248022417	ENSG00000197454.1	+	protein_coding	KNOWN	OR2L5	1	1	-0.345217
chr1	248029120	248029221	248029170	ENSG00000200085.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.345217
chr1	248038268	248039206	248038737	ENSG00000203663.3	+	protein_coding	KNOWN	OR2L2	1	1	-0.521540
chr1	248045788	248045889	248045838	ENSG00000200982.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.521540
chr1	248060682	248061620	248061151	ENSG00000198128.3	+	protein_coding	KNOWN	OR2L3	1	1	-0.614716
chr1	248083634	248084596	248084115	ENSG00000197067.5	-	unprocessed_pseudogene	KNOWN	OR2T32P	1	1	-0.451630
chr1	248121932	248122882	248122407	ENSG00000177233.2	+	unprocessed_pseudogene	KNOWN	OR2M1P	1	1	-0.524093
chr1	248145148	248146086	248145617	ENSG00000162727.3	+	protein_coding	KNOWN	OR2M5	1	1	-0.242009
chr1	248179986	248181029	248180507	ENSG00000198601.2	+	protein_coding	KNOWN	OR2M2	1	1	-0.197515
chr1	248203068	248204006	248203537	ENSG00000228198.2	+	protein_coding	KNOWN	OR2M3	1	1	-0.414968
chr1	248238929	248239864	248239396	ENSG00000171180.1	+	protein_coding	KNOWN	OR2M4	1	1	-0.604332
chr1	248272852	248273814	248273333	ENSG00000177212.3	-	protein_coding	KNOWN	OR2T33	1	1	-0.729038
chr1	248294616	248295578	248295097	ENSG00000177201.1	-	protein_coding	KNOWN	OR2T12	1	1	-0.790651
chr1	248323630	248324568	248324099	ENSG00000177186.3	-	protein_coding	KNOWN	OR2M7	1	1	-0.535282
chr1	248348775	248349713	248349244	ENSG00000177174.1	+	protein_coding	KNOWN	OR14C36	1	1	-0.323046
chr1	248361581	248362627	248362104	ENSG00000196944.3	+	protein_coding	KNOWN	OR2T4	1	1	-0.557676
chr1	248387609	248388535	248388072	ENSG00000198104.2	+	protein_coding	KNOWN	OR2T6	1	1	-0.492971
chr1	248405995	248407104	248406549	ENSG00000175143.3	+	protein_coding	KNOWN	OR2T1	1	1	-0.183643
chr1	248441207	248442133	248441670	ENSG00000227152.5	+	unprocessed_pseudogene	KNOWN	OR2T7	1	1	-0.433099
chr1	248452798	248453772	248453285	ENSG00000196240.3	+	protein_coding	KNOWN	OR2T2	1	1	-0.369058
chr1	248473351	248474307	248473829	ENSG00000196539.3	+	protein_coding	KNOWN	OR2T3	1	1	-0.602269
chr1	248484245	248485484	248484864	ENSG00000229255.1	-	lincRNA	KNOWN	RP11-407H12.8	1	2	-0.602269
chr1	248488589	248489536	248489062	ENSG00000203661.3	+	protein_coding	KNOWN	OR2T5	1	1	-0.602269
chr1	248498308	248498628	248498468	ENSG00000271934.1	+	unprocessed_pseudogene	KNOWN	OR2AS2P	1	1	-0.457975
chr1	248521647	248522597	248522122	ENSG00000188558.5	+	protein_coding	KNOWN	OR2G6	1	1	-0.641834
chr1	248548756	248563839	248556297	ENSG00000224521.1	+	antisense	KNOWN	RP11-438F14.3	2	2	-0.292488
chr1	248549444	248549762	248549603	ENSG00000227102.2	-	unprocessed_pseudogene	KNOWN	OR2AS1P	1	1	-0.666302
chr1	248558544	248559491	248559017	ENSG00000182783.4	-	protein_coding	KNOWN	OR2T29	1	1	-0.258915
chr1	248573801	248574757	248574279	ENSG00000183310.3	-	protein_coding	KNOWN	OR2T34	1	1	-0.395274
chr1	248592830	248593768	248593299	ENSG00000184022.3	-	protein_coding	KNOWN	OR2T10	1	1	-0.484797
chr1	248594925	248595033	248594979	ENSG00000201602.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.484797
chr1	248601416	248601869	248601642	ENSG00000271701.1	+	processed_pseudogene	KNOWN	RP11-438F14.10	1	1	-0.484797
chr1	248626119	248627190	248626654	ENSG00000279301.1	-	polymorphic_pseudogene	KNOWN	OR2T11	2	1	-0.681237
chr1	248626178	248627128	248626653	ENSG00000183130.3	-	protein_coding	KNOWN	OR2T11	1	1	-0.681237
chr1	248638287	248639258	248638772	ENSG00000177151.3	-	protein_coding	KNOWN	OR2T35	1	1	-0.278377
chr1	248649931	248650884	248650407	ENSG00000187701.3	-	protein_coding	KNOWN	OR2T27	1	1	-0.417694
chr1	248681369	248682304	248681836	ENSG00000189181.4	-	protein_coding	KNOWN	OR14I1	1	1	-0.462320
chr1	248692191	248699110	248695650	ENSG00000229703.4	+	lincRNA	KNOWN	XX-CR54.1	2	2	-0.101831
chr1	248708202	248708641	248708421	ENSG00000276520.1	+	processed_pseudogene	KNOWN	WI2-2118C23.2	1	1	-0.101831
chr1	248718649	248755739	248737194	ENSG00000259823.5	-	protein_coding	KNOWN	LYPD8	2	7	-0.202393
chr1	248721993	248722201	248722097	ENSG00000242529.1	-	processed_pseudogene	KNOWN	AHCYP8	1	1	-0.346129
chr1	248771635	248773792	248772713	ENSG00000229663.1	-	processed_pseudogene	KNOWN	AL672296.1	1	1	-0.100653
chr1	248810446	248826633	248818539	ENSG00000175137.10	-	protein_coding	KNOWN	SH3BP5L	4	9	0.352144
chr1	248826377	248826443	248826410	ENSG00000264500.1	+	miRNA	KNOWN	MIR3124	1	1	0.352144
chr1	248838210	248849517	248843863	ENSG00000171161.12	+	protein_coding	KNOWN	ZNF672	7	5	0.385284
chr1	248850006	248859144	248854575	ENSG00000171163.15	-	protein_coding	KNOWN	ZNF692	30	12	0.446949
chr1	248859164	248864796	248861980	ENSG00000227237.1	+	antisense	KNOWN	AL672294.1	1	3	0.446949
chr1	248906196	248919946	248913071	ENSG00000185220.11	+	protein_coding	KNOWN	PGBD2	3	3	-0.112440
chr1	248912690	248912795	248912742	ENSG00000200495.1	-	snRNA	KNOWN	RNU6-1205P	1	1	-0.071833
chr1	248936581	248937043	248936812	ENSG00000233084.2	+	processed_pseudogene	KNOWN	RPL23AP25	1	1	-0.060011
chr10	14061	16544	15302	ENSG00000260370.1	-	lincRNA	KNOWN	RP11-631M21.1	2	2	0.701677
chr10	44712	46884	45798	ENSG00000237297.1	+	unprocessed_pseudogene	KNOWN	FAM166AP7	1	6	-0.094160
chr10	46892	74163	60527	ENSG00000261456.5	-	protein_coding	KNOWN	TUBB8	7	4	-0.008759
chr10	80394	86265	83329	ENSG00000232420.2	-	unprocessed_pseudogene	KNOWN	IL9RP2	1	7	0.383223
chr10	134465	254637	194551	ENSG00000015171.18	+	protein_coding	KNOWN	ZMYND11	17	15	-0.030279
chr10	147820	148751	148285	ENSG00000276662.1	-	unprocessed_pseudogene	KNOWN	RP11-631M21.7	1	2	0.059014
chr10	154831	154943	154887	ENSG00000212331.1	-	rRNA	KNOWN	RNA5SP297	1	1	-0.013718
chr10	199882	199981	199931	ENSG00000264544.2	-	miRNA	NOVEL	AL589988.1	1	1	0.221760
chr10	274190	689668	481929	ENSG00000151240.16	-	protein_coding	KNOWN	DIP2C	5	39	0.473144
chr10	277184	277308	277246	ENSG00000264248.1	+	miRNA	NOVEL	AL603831.1	1	1	0.580739
chr10	282015	282125	282070	ENSG00000201861.1	-	rRNA	KNOWN	RNA5SP298	1	1	0.580739
chr10	430239	430504	430371	ENSG00000239822.3	-	misc_RNA	KNOWN	RN7SL754P	1	1	0.201221
chr10	437561	441170	439365	ENSG00000233021.2	+	antisense	KNOWN	RP11-490E15.2	1	2	0.201221
chr10	628638	631255	629946	ENSG00000225140.1	+	antisense	KNOWN	RP11-809C18.3	1	2	0.552992
chr10	641689	641778	641733	ENSG00000263511.1	-	miRNA	KNOWN	MIR5699	1	1	0.492012
chr10	649948	669581	659764	ENSG00000180525.11	+	protein_coding	KNOWN	PRR26	3	3	0.376817
chr10	743992	744958	744475	ENSG00000231601.1	+	lincRNA	KNOWN	RP11-164C1.2	1	2	0.346457
chr10	806914	931705	869309	ENSG00000107929.14	-	protein_coding	KNOWN	LARP4B	12	18	0.241474
chr10	933026	942743	937884	ENSG00000229869.1	+	antisense	KNOWN	RP11-363N22.2	1	3	0.219606
chr10	971146	988341	979743	ENSG00000205740.2	-	processed_transcript	KNOWN	RP11-363N22.3	2	2	0.222300
chr10	988019	1019936	1003977	ENSG00000107937.18	+	protein_coding	KNOWN	GTPBP4	5	17	0.420297
chr10	1018907	1025859	1022383	ENSG00000148377.5	-	protein_coding	KNOWN	IDI2	1	5	0.459109
chr10	1022666	1044201	1033433	ENSG00000232656.7	+	antisense	KNOWN	IDI2-AS1	5	6	0.478744
chr10	1039908	1049170	1044539	ENSG00000067064.10	-	protein_coding	KNOWN	IDI1	5	5	0.488882
chr10	1049538	1132297	1090917	ENSG00000047056.14	+	protein_coding	KNOWN	WDR37	6	14	0.289999
chr10	1159768	1164672	1162220	ENSG00000229205.2	+	lincRNA	KNOWN	LINC00200	2	3	-0.086154
chr10	1177318	1737476	1457397	ENSG00000185736.15	-	protein_coding	KNOWN	ADARB2	7	10	0.033840
chr10	1290018	1293002	1291510	ENSG00000282390.1	-	sense_intronic	KNOWN	RP11-29A19.2	1	1	-0.148323
chr10	1361001	1361637	1361319	ENSG00000233052.1	-	sense_intronic	KNOWN	RP11-398B16.2	1	2	0.018369
chr10	1526637	1556984	1541810	ENSG00000205696.4	+	antisense	KNOWN	ADARB2-AS1	2	3	-0.002352
chr10	2005473	2014348	2009910	ENSG00000234962.5	-	lincRNA	KNOWN	LINC00700	3	3	-0.337246
chr10	2071845	2081097	2076471	ENSG00000226694.2	+	lincRNA	KNOWN	RP11-69C17.2	1	2	-0.194722
chr10	2076019	2076089	2076054	ENSG00000278069.1	-	miRNA	KNOWN	MIR6072	1	1	-0.194722
chr10	2098167	2098269	2098218	ENSG00000252998.1	+	snRNA	KNOWN	RNU6-889P	1	1	-0.243611
chr10	2166332	2169460	2167896	ENSG00000227912.1	+	lincRNA	KNOWN	RP11-69C17.3	1	2	-0.421536
chr10	2169140	2189474	2179307	ENSG00000231326.6	-	lincRNA	KNOWN	RP11-69C17.4	2	5	-0.171427
chr10	2199387	2199488	2199437	ENSG00000212156.1	+	snRNA	KNOWN	RNU6-576P	1	1	-0.074018
chr10	2305083	2315075	2310079	ENSG00000234556.1	-	lincRNA	KNOWN	LINC00701	1	3	-0.374003
chr10	2446253	2447352	2446802	ENSG00000234170.5	-	lincRNA	KNOWN	RP11-446F3.2	3	2	-0.175781
chr10	2453135	2453224	2453179	ENSG00000264261.1	-	miRNA	NOVEL	AC024908.1	1	1	-0.346378
chr10	2499721	2500570	2500145	ENSG00000237500.1	+	lincRNA	KNOWN	RP11-526P5.1	1	2	-0.236241
chr10	2501783	2567239	2534511	ENSG00000235281.1	+	lincRNA	KNOWN	RP11-526P5.2	2	2	-0.274737
chr10	2789039	2789125	2789082	ENSG00000265463.2	-	miRNA	NOVEL	AL355361.1	1	1	-0.051500
chr10	2936021	2936441	2936231	ENSG00000231743.1	+	processed_pseudogene	KNOWN	RP11-89K18.1	1	1	0.099223
chr10	3010531	3013111	3011821	ENSG00000234182.1	+	lincRNA	KNOWN	RP11-118K6.2	1	3	0.115075
chr10	3065424	3066001	3065712	ENSG00000273001.1	-	lincRNA	KNOWN	RP11-118K6.3	1	1	0.173063
chr10	3066333	3137712	3102022	ENSG00000067057.16	+	protein_coding	KNOWN	PFKP	12	24	0.743366
chr10	3134566	3145166	3139866	ENSG00000278419.1	+	antisense	KNOWN	RP11-298E9.7	1	4	0.915527
chr10	3137728	3172841	3155284	ENSG00000107959.15	-	protein_coding	KNOWN	PITRM1	11	27	0.629921
chr10	3141632	3167972	3154802	ENSG00000237399.7	+	antisense	KNOWN	PITRM1-AS1	3	4	0.618727
chr10	3223816	3227407	3225611	ENSG00000236968.1	+	lincRNA	KNOWN	RP11-298E9.5	1	3	0.237843
chr10	3234463	3234600	3234531	ENSG00000275926.1	+	miRNA	NOVEL	AL451164.1	1	1	0.441066
chr10	3240371	3257210	3248790	ENSG00000226762.1	-	lincRNA	KNOWN	RP11-298E9.6	1	4	0.456730
chr10	3266003	3267015	3266509	ENSG00000227338.1	+	lincRNA	KNOWN	RP11-195B3.1	1	2	0.477645
chr10	3486894	3502838	3494866	ENSG00000233321.1	-	lincRNA	KNOWN	RP11-482E14.1	1	5	0.009400
chr10	3532094	3537031	3534562	ENSG00000236892.1	-	lincRNA	KNOWN	RP11-482E14.2	2	2	0.179015
chr10	3751067	3763226	3757146	ENSG00000229672.2	+	antisense	KNOWN	RP11-184A2.3	1	6	0.394788
chr10	3767915	3768751	3768333	ENSG00000228353.1	+	antisense	KNOWN	RP11-184A2.2	1	2	0.394788
chr10	3775996	3785281	3780638	ENSG00000067082.14	-	protein_coding	KNOWN	KLF6	7	4	0.122526
chr10	3833950	3834728	3834339	ENSG00000230573.1	+	lincRNA	KNOWN	RP11-464C19.2	1	2	0.306649
chr10	3934519	3935813	3935166	ENSG00000226005.3	+	lincRNA	KNOWN	RP11-464C19.3	1	2	0.258770
chr10	3991160	3991259	3991209	ENSG00000274809.1	+	miRNA	KNOWN	MIR6078	1	1	0.195085
chr10	4024940	4028394	4026667	ENSG00000227101.1	+	lincRNA	KNOWN	RP11-433J20.2	1	2	0.160163
chr10	4051726	4089013	4070369	ENSG00000236990.1	+	lincRNA	KNOWN	RP11-433J20.1	1	4	0.193647
chr10	4201141	4243912	4222526	ENSG00000233117.2	-	lincRNA	KNOWN	LINC00702	3	3	0.124532
chr10	4384246	4410612	4397429	ENSG00000224382.1	+	lincRNA	KNOWN	LINC00703	2	2	-0.038736
chr10	4415305	4426179	4420742	ENSG00000230096.1	-	lincRNA	KNOWN	RP11-34C15.2	1	4	-0.245449
chr10	4514952	4515057	4515004	ENSG00000207124.1	+	snRNA	KNOWN	RNU6-163P	1	1	0.207469
chr10	4650185	4678154	4664169	ENSG00000231298.6	-	lincRNA	KNOWN	LINC00704	3	5	0.095492
chr10	4655427	4662419	4658923	ENSG00000225269.2	+	lincRNA	KNOWN	LINC00705	1	3	0.242132
chr10	4786629	4848062	4817345	ENSG00000165568.17	+	protein_coding	KNOWN	AKR1E2	13	10	-0.099201
chr10	4871901	4891975	4881938	ENSG00000151631.8	-	unprocessed_pseudogene	KNOWN	AKR1C6P	1	9	-0.505861
chr10	4922564	5135226	5028895	ENSG00000151632.16	-	protein_coding	KNOWN	AKR1C2	11	10	-0.264297
chr10	4962436	4962568	4962502	ENSG00000238840.1	-	snoRNA	NOVEL	U8	1	1	0.032182
chr10	4963253	5107522	5035387	ENSG00000187134.12	+	protein_coding	KNOWN	AKR1C1	6	9	-0.307405
chr10	4995488	4997380	4996434	ENSG00000224251.6	+	antisense	KNOWN	RP11-499O7.7	2	3	-0.607661
chr10	5004710	5004842	5004776	ENSG00000239148.1	+	snoRNA	NOVEL	U8	1	1	-0.607661
chr10	5035354	5107686	5071520	ENSG00000196139.12	+	protein_coding	KNOWN	AKR1C3	10	9	-0.259890
chr10	5048812	5107503	5078157	ENSG00000282883.1	+	protein_coding	KNOWN	AKR1C3	1	9	-0.318353
chr10	5048812	5051670	5050241	ENSG00000237831.1	+	unprocessed_pseudogene	KNOWN	RP11-499O7.4	1	2	-0.094635
chr10	5093408	5093543	5093475	ENSG00000239142.1	-	snoRNA	NOVEL	U8	1	1	-0.417683
chr10	5122087	5135226	5128656	ENSG00000225418.1	-	unprocessed_pseudogene	KNOWN	AKR1C5P	1	5	-0.328862
chr10	5154143	5185187	5169665	ENSG00000264006.6	-	transcribed_unprocessed_pseudogene	KNOWN	AKR1C8P	2	9	-0.304273
chr10	5195462	5218949	5207205	ENSG00000198610.10	+	protein_coding	KNOWN	AKR1C4	3	11	-0.221538
chr10	5207169	5207742	5207455	ENSG00000228291.1	+	processed_pseudogene	KNOWN	RP11-445P17.6	1	1	-0.209472
chr10	5234358	5263408	5248883	ENSG00000231039.2	+	lincRNA	KNOWN	RP11-445P17.3	1	2	-0.273761
chr10	5266033	5271236	5268634	ENSG00000224034.1	-	lincRNA	KNOWN	RP11-445P17.8	1	2	-0.330219
chr10	5275173	5288470	5281821	ENSG00000215267.8	-	transcribed_unprocessed_pseudogene	KNOWN	AKR1C7P	2	8	-0.298798
chr10	5304431	5304865	5304648	ENSG00000223987.1	-	processed_pseudogene	KNOWN	RP11-445P17.5	1	1	-0.010258
chr10	5346651	5347277	5346964	ENSG00000280450.1	+	TEC	KNOWN	XXyac-YR21CG7.1	1	1	-0.308832
chr10	5365009	5374692	5369850	ENSG00000178473.6	+	protein_coding	KNOWN	UCN3	1	2	-0.128883
chr10	5393098	5404830	5398964	ENSG00000178462.11	-	protein_coding	KNOWN	TUBAL3	2	4	0.010462
chr10	5412551	5458463	5435507	ENSG00000173848.18	+	protein_coding	KNOWN	NET1	6	12	-0.102259
chr10	5498697	5499555	5499126	ENSG00000178372.7	-	protein_coding	KNOWN	CALML5	1	1	0.608954
chr10	5514244	5526246	5520245	ENSG00000205488.8	-	antisense	KNOWN	CALML3-AS1	3	4	0.551423
chr10	5524009	5526771	5525390	ENSG00000178363.4	+	protein_coding	KNOWN	CALML3	1	1	0.551423
chr10	5524976	5525742	5525359	ENSG00000256462.1	-	antisense	KNOWN	RP11-116G8.5	1	2	0.551423
chr10	5594991	5596118	5595554	ENSG00000242147.1	-	lincRNA	KNOWN	RP13-463N16.6	1	2	0.633562
chr10	5608475	5610793	5609634	ENSG00000231483.1	-	lincRNA	KNOWN	RP11-336A10.5	1	5	0.687981
chr10	5616862	5618161	5617511	ENSG00000228951.1	-	lincRNA	KNOWN	RP11-336A10.4	1	3	0.792432
chr10	5624931	5625126	5625028	ENSG00000228685.1	+	processed_pseudogene	KNOWN	RP11-336A10.7	1	1	0.792432
chr10	5631463	5631755	5631609	ENSG00000240577.3	+	misc_RNA	KNOWN	RN7SL445P	1	1	0.203309
chr10	5638867	5666595	5652731	ENSG00000196372.12	-	protein_coding	KNOWN	ASB13	5	7	0.406683
chr10	5684838	5763740	5724289	ENSG00000108021.19	+	protein_coding	KNOWN	FAM208B	13	21	-0.016876
chr10	5712174	5744067	5728120	ENSG00000226647.2	-	antisense	KNOWN	RP11-336A10.2	2	2	-0.143742
chr10	5765223	5842132	5803677	ENSG00000057608.16	-	protein_coding	KNOWN	GDI2	9	11	0.385358
chr10	5776071	5776858	5776464	ENSG00000270427.1	+	processed_pseudogene	KNOWN	NRBF2P5	1	1	0.572158
chr10	5813985	5814441	5814213	ENSG00000272764.1	+	lincRNA	KNOWN	RP11-318E3.9	1	2	0.410353
chr10	5861617	5889906	5875761	ENSG00000134461.15	-	protein_coding	KNOWN	ANKRD16	4	8	0.469731
chr10	5861805	5862594	5862199	ENSG00000240180.1	-	processed_pseudogene	KNOWN	RPL12P28	1	2	0.742153
chr10	5890203	5937594	5913898	ENSG00000134452.19	+	protein_coding	KNOWN	FBXO18	16	22	0.238776
chr10	5934270	5945900	5940085	ENSG00000232807.2	-	antisense	KNOWN	RP11-536K7.3	3	2	0.652707
chr10	5937569	5978187	5957878	ENSG00000134470.19	-	protein_coding	KNOWN	IL15RA	23	8	0.480852
chr10	6010689	6062325	6036507	ENSG00000134460.15	-	protein_coding	KNOWN	IL2RA	4	8	0.030992
chr10	6017054	6017194	6017124	ENSG00000251922.1	-	snoRNA	NOVEL	SNORA14	1	1	0.113365
chr10	6025978	6036427	6031202	ENSG00000229664.1	+	antisense	KNOWN	RP11-536K7.5	1	3	0.047215
chr10	6071514	6071918	6071716	ENSG00000214015.3	-	processed_pseudogene	KNOWN	RP11-414H17.2	1	1	0.131305
chr10	6088987	6117457	6103222	ENSG00000134453.15	+	protein_coding	KNOWN	RBM17	12	12	0.273886
chr10	6144934	6235545	6190239	ENSG00000170525.18	+	protein_coding	KNOWN	PFKFB3	17	18	0.697193
chr10	6149623	6149940	6149781	ENSG00000201581.1	+	misc_RNA	KNOWN	RN7SKP78	1	1	0.458935
chr10	6152196	6152277	6152236	ENSG00000263628.1	+	miRNA	KNOWN	MIR3155A	1	1	0.816117
chr10	6197612	6202693	6200152	ENSG00000213994.3	-	antisense	KNOWN	RP11-414H17.5	1	2	0.520835
chr10	6245731	6245831	6245781	ENSG00000238366.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.693828
chr10	6277687	6335982	6306834	ENSG00000215244.2	+	lincRNA	KNOWN	RP11-563J2.2	1	7	0.109331
chr10	6293100	6294684	6293892	ENSG00000226705.1	-	processed_pseudogene	KNOWN	SDCBPP1	1	4	0.043082
chr10	6350316	6352762	6351539	ENSG00000212743.2	+	lincRNA	KNOWN	RP11-563J2.3	1	1	0.059202
chr10	6427143	6580301	6503722	ENSG00000065675.14	-	protein_coding	KNOWN	PRKCQ	4	18	-0.168520
chr10	6580419	6616452	6598435	ENSG00000237943.6	+	processed_transcript	KNOWN	PRKCQ-AS1	20	9	-0.159126
chr10	6618716	6625346	6622031	ENSG00000225948.2	+	lincRNA	KNOWN	RP11-554I8.1	1	4	-0.270578
chr10	6655662	6655798	6655730	ENSG00000281532.1	+	miRNA	NOVEL	AL158210.1	1	1	-0.579385
chr10	6737382	6739026	6738204	ENSG00000223784.1	+	lincRNA	KNOWN	RP11-554I8.2	1	2	0.431198
chr10	6774307	6779180	6776743	ENSG00000281186.1	-	lincRNA	KNOWN	LINC00706	1	2	0.340339
chr10	6779598	6842906	6811252	ENSG00000238266.1	+	lincRNA	KNOWN	LINC00707	1	5	0.010256
chr10	6891457	6920472	6905964	ENSG00000234248.1	-	lincRNA	KNOWN	RP11-799O21.2	1	3	-0.198128
chr10	7097152	7097675	7097413	ENSG00000223581.1	+	lincRNA	KNOWN	RP11-393K12.2	1	2	-0.275984
chr10	7154120	7154236	7154178	ENSG00000270811.1	+	processed_pseudogene	KNOWN	RP11-393K12.4	1	1	-0.182371
chr10	7158624	7411486	7285055	ENSG00000198879.11	-	protein_coding	KNOWN	SFMBT2	4	21	-0.155467
chr10	7295106	7295290	7295198	ENSG00000235141.1	-	processed_pseudogene	KNOWN	COX6CP17	1	1	-0.337121
chr10	7411599	7413467	7412533	ENSG00000278982.1	+	TEC	KNOWN	RP5-1031D4.3	1	1	-0.237510
chr10	7445558	7471942	7458750	ENSG00000232591.1	-	lincRNA	KNOWN	RP5-1031D4.2	1	4	-0.243336
chr10	7486703	7486809	7486756	ENSG00000207453.1	-	snRNA	KNOWN	RNU6-535P	1	1	-0.231797
chr10	7533207	7536565	7534886	ENSG00000230121.1	+	antisense	KNOWN	RP11-385N23.1	1	3	-0.201300
chr10	7559270	7666998	7613134	ENSG00000123243.14	-	protein_coding	KNOWN	ITIH5	9	14	-0.075199
chr10	7703269	7749520	7726394	ENSG00000151655.17	+	protein_coding	KNOWN	ITIH2	7	23	0.003023
chr10	7750962	7787981	7769471	ENSG00000151657.11	-	protein_coding	KNOWN	KIN	5	13	-0.110480
chr10	7788129	7807815	7797972	ENSG00000165629.19	+	protein_coding	KNOWN	ATP5C1	10	10	0.038613
chr10	7818504	8016627	7917565	ENSG00000165632.7	+	protein_coding	KNOWN	TAF3	1	7	-0.047763
chr10	7833618	7833957	7833787	ENSG00000233990.1	-	processed_pseudogene	KNOWN	RP11-401E9.3	1	1	0.326003
chr10	8050450	8053484	8051967	ENSG00000197308.8	-	lincRNA	KNOWN	GATA3-AS1	3	3	0.206249
chr10	8051541	8053084	8052312	ENSG00000232638.1	+	lincRNA	KNOWN	RP11-379F12.4	1	3	0.206249
chr10	8052242	8053449	8052845	ENSG00000243350.1	-	lincRNA	KNOWN	RP11-379F12.3	2	2	0.206249
chr10	8053604	8075198	8064401	ENSG00000107485.15	+	protein_coding	KNOWN	GATA3	4	6	0.152852
chr10	8161260	8162192	8161726	ENSG00000225053.1	+	processed_pseudogene	KNOWN	PRPF38AP1	1	1	-0.073817
chr10	8259331	8268305	8263818	ENSG00000232170.5	-	lincRNA	KNOWN	LINC00708	2	5	-0.215742
chr10	8298897	8301667	8300282	ENSG00000226861.1	+	lincRNA	KNOWN	RP5-1119O21.2	1	2	-0.089034
chr10	8400860	8461863	8431361	ENSG00000226990.1	+	lincRNA	KNOWN	RP11-543F8.2	1	4	-0.111396
chr10	8472719	8472952	8472835	ENSG00000271251.1	+	processed_pseudogene	KNOWN	RP11-543F8.3	1	1	-0.296862
chr10	8513687	8515106	8514396	ENSG00000213771.3	-	processed_pseudogene	KNOWN	KRT8P37	1	1	-0.193165
chr10	8619933	8620608	8620270	ENSG00000236420.1	+	processed_pseudogene	KNOWN	CHCHD3P1	1	1	-0.417957
chr10	8656716	8656831	8656773	ENSG00000212505.1	-	rRNA	KNOWN	RNA5SP299	1	1	-0.475377
chr10	8724010	8724288	8724149	ENSG00000270234.1	+	processed_pseudogene	KNOWN	RP11-575N15.1	1	1	-0.568259
chr10	8897989	8914596	8906292	ENSG00000234752.1	+	lincRNA	KNOWN	RP11-428L9.1	1	4	-0.540719
chr10	8970125	8973468	8971796	ENSG00000223808.1	+	lincRNA	KNOWN	RP11-428L9.2	1	2	-0.432670
chr10	9275833	9287057	9281445	ENSG00000230014.1	+	lincRNA	KNOWN	LINC00709	1	2	-0.136277
chr10	9721963	9724416	9723189	ENSG00000235838.1	-	processed_pseudogene	KNOWN	HSP90AB7P	1	1	-0.581198
chr10	9758783	9759237	9759010	ENSG00000228636.1	-	lincRNA	KNOWN	RP5-1051H14.2	1	2	-0.754203
chr10	10058722	10063502	10061112	ENSG00000224788.1	+	lincRNA	KNOWN	RP5-933E2.1	1	4	-0.644974
chr10	10174230	10174577	10174403	ENSG00000229919.3	+	processed_pseudogene	KNOWN	TCEB1P3	1	1	-0.562873
chr10	10232611	10232712	10232661	ENSG00000200849.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.338643
chr10	10257169	10257466	10257317	ENSG00000272436.1	-	processed_pseudogene	KNOWN	CUX2P1	1	1	-0.564355
chr10	10365180	10366487	10365833	ENSG00000234306.1	-	lincRNA	KNOWN	RP11-271F18.1	1	2	-0.335429
chr10	10394670	10395737	10395203	ENSG00000279575.1	+	TEC	KNOWN	RP11-271F18.3	1	1	-0.330865
chr10	10418739	10462349	10440544	ENSG00000270111.2	-	lincRNA	KNOWN	RP11-271F18.4	2	4	-0.457263
chr10	10776223	10776661	10776442	ENSG00000228997.1	-	processed_pseudogene	KNOWN	RP1-186E20.1	1	1	0.077345
chr10	10784437	10794980	10789708	ENSG00000225383.7	-	lincRNA	KNOWN	SFTA1P	5	4	0.053101
chr10	10917880	10952234	10935057	ENSG00000229240.8	-	processed_transcript	KNOWN	LINC00710	20	7	-0.160123
chr10	10960151	10970816	10965483	ENSG00000231496.1	+	lincRNA	KNOWN	RP1-251M9.2	1	3	0.223980
chr10	11005321	11336675	11170998	ENSG00000048740.17	+	protein_coding	KNOWN	CELF2	14	14	-0.186713
chr10	11010164	11011119	11010641	ENSG00000228027.1	-	antisense	KNOWN	RP1-251M9.3	1	2	-0.142964
chr10	11030334	11030868	11030601	ENSG00000229206.3	-	lincRNA	KNOWN	RP11-397O4.1	1	2	-0.377493
chr10	11071541	11105504	11088522	ENSG00000237986.3	-	antisense	KNOWN	CELF2-AS2	4	6	-0.139545
chr10	11168922	11171376	11170149	ENSG00000230322.1	-	antisense	KNOWN	RP3-323N1.2	1	2	-0.244722
chr10	11316834	11319884	11318359	ENSG00000181800.5	-	antisense	KNOWN	CELF2-AS1	1	2	-0.120669
chr10	11395808	11398792	11397300	ENSG00000280086.1	+	TEC	KNOWN	RP11-544P1.3	1	1	0.084458
chr10	11453946	11611754	11532850	ENSG00000148429.14	-	protein_coding	KNOWN	USP6NL	6	15	-0.078522
chr10	11611305	11612227	11611766	ENSG00000271360.1	+	antisense	KNOWN	RP11-138I18.1	1	1	0.091992
chr10	11679675	11680514	11680094	ENSG00000271046.1	+	lincRNA	KNOWN	RP11-138I18.2	1	1	0.009956
chr10	11742366	11764070	11753218	ENSG00000134463.14	+	protein_coding	KNOWN	ECHDC3	5	6	0.136750
chr10	11823339	11872277	11847808	ENSG00000148426.12	+	protein_coding	KNOWN	PROSER2	5	5	0.319908
chr10	11849608	11894700	11872154	ENSG00000225778.5	-	antisense	KNOWN	PROSER2-AS1	2	6	0.421252
chr10	11920022	12043170	11981596	ENSG00000151461.19	-	protein_coding	KNOWN	UPF2	4	22	0.131035
chr10	11923181	11923288	11923234	ENSG00000251957.1	+	snRNA	KNOWN	RNU6-1095P	1	1	0.536602
chr10	11927351	11927441	11927396	ENSG00000273781.1	-	miRNA	NOVEL	AL138898.1	1	1	0.536602
chr10	12068972	12123225	12096098	ENSG00000181192.11	+	protein_coding	KNOWN	DHTKD1	6	17	0.379073
chr10	12116280	12116379	12116329	ENSG00000272507.1	-	snRNA	KNOWN	RNU6-88P	1	1	0.394788
chr10	12129637	12169961	12149799	ENSG00000065665.20	+	protein_coding	KNOWN	SEC61A2	14	14	0.491443
chr10	12130760	12130816	12130788	ENSG00000265653.1	-	miRNA	KNOWN	MIR548AK	1	1	0.553323
chr10	12165325	12196144	12180734	ENSG00000165609.12	-	protein_coding	KNOWN	NUDT5	9	11	0.214539
chr10	12195965	12250589	12223277	ENSG00000151465.13	+	protein_coding	KNOWN	CDC123	9	13	0.106107
chr10	12244751	12247845	12246298	ENSG00000228302.2	-	antisense	KNOWN	RP11-186N15.3	2	2	0.034111
chr10	12328132	12328389	12328260	ENSG00000264036.2	-	misc_RNA	KNOWN	RN7SL198P	1	1	0.311670
chr10	12349482	12835545	12592513	ENSG00000183049.12	+	protein_coding	KNOWN	CAMK1D	4	11	-0.019252
chr10	12415928	12416000	12415964	ENSG00000252438.1	+	snoRNA	NOVEL	SNORD45	1	1	0.162813
chr10	12456483	12456631	12456557	ENSG00000252118.1	+	snRNA	KNOWN	RNU6ATAC39P	1	1	-0.213817
chr10	12578753	12578823	12578788	ENSG00000263584.1	+	miRNA	KNOWN	MIR4480	1	1	0.187340
chr10	12725254	12725353	12725303	ENSG00000221331.1	-	miRNA	KNOWN	MIR548Q	1	1	0.139557
chr10	12896625	13099652	12998138	ENSG00000151468.10	-	protein_coding	KNOWN	CCDC3	2	7	-0.073161
chr10	12924679	12924785	12924732	ENSG00000212499.1	-	rRNA	KNOWN	RNA5SP300	1	1	0.009099
chr10	13057902	13058676	13058289	ENSG00000225251.1	-	processed_pseudogene	KNOWN	RPL5P25	1	1	0.091992
chr10	13099449	13138308	13118878	ENSG00000123240.16	+	protein_coding	KNOWN	OPTN	12	16	0.046854
chr10	13104574	13104793	13104683	ENSG00000235763.1	-	processed_pseudogene	KNOWN	SNRPGP5	1	1	-0.003165
chr10	13139196	13139533	13139364	ENSG00000234175.1	-	processed_pseudogene	KNOWN	RP11-730A19.9	1	1	0.083430
chr10	13142185	13142977	13142581	ENSG00000228330.1	-	processed_pseudogene	KNOWN	RP11-730A19.5	1	1	0.083430
chr10	13156684	13158136	13157410	ENSG00000203414.2	-	processed_pseudogene	KNOWN	BTBD7P1	1	1	0.246877
chr10	13159477	13159777	13159627	ENSG00000237540.1	-	processed_pseudogene	KNOWN	RP11-730A19.7	1	1	0.246877
chr10	13161554	13211104	13186329	ENSG00000065328.16	+	protein_coding	KNOWN	MCM10	7	20	0.070557
chr10	13217269	13217375	13217322	ENSG00000272055.1	+	snRNA	KNOWN	RNU6-6P	1	1	-0.083095
chr10	13221767	13234334	13228050	ENSG00000165623.9	-	protein_coding	KNOWN	UCMA	2	5	-0.060789
chr10	13277796	13302412	13290104	ENSG00000107537.13	-	protein_coding	KNOWN	PHYH	7	9	0.216213
chr10	13308145	13308447	13308296	ENSG00000226209.1	-	processed_pseudogene	KNOWN	C8orf59P1	1	1	0.200052
chr10	13317424	13348298	13332861	ENSG00000086475.14	-	protein_coding	KNOWN	SEPHS1	6	9	0.424567
chr10	13415202	13423133	13419167	ENSG00000233256.1	+	antisense	KNOWN	RP11-445K13.2	1	2	-0.078849
chr10	13438484	13528974	13483729	ENSG00000165626.16	-	protein_coding	KNOWN	BEND7	9	9	-0.056127
chr10	13511206	13511313	13511259	ENSG00000202508.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.061618
chr10	13528516	13530262	13529389	ENSG00000227175.1	+	antisense	KNOWN	RP11-214D15.2	1	2	0.085461
chr10	13586927	13630868	13608897	ENSG00000165630.13	+	protein_coding	KNOWN	PRPF18	3	10	-0.017928
chr10	13591460	13592323	13591891	ENSG00000227474.1	-	processed_pseudogene	KNOWN	RP11-295P9.2	1	1	-0.025660
chr10	13610047	13655929	13632988	ENSG00000282246.1	+	protein_coding	KNOWN	RP11-295P9.13	3	7	-0.031552
chr10	13631143	13668445	13649794	ENSG00000239665.8	+	processed_transcript	KNOWN	RP11-295P9.3	56	8	0.006258
chr10	13643706	14462142	14052924	ENSG00000151474.19	-	protein_coding	KNOWN	FRMD4A	12	25	0.176579
chr10	13675646	13675990	13675818	ENSG00000273474.1	+	antisense	KNOWN	RP11-295P9.12	1	1	0.448926
chr10	13704978	13705072	13705025	ENSG00000222235.1	+	miRNA	NOVEL	AL157392.1	1	1	0.232854
chr10	13710415	13712054	13711234	ENSG00000225112.1	+	antisense	KNOWN	RP11-295P9.6	1	2	0.457987
chr10	13727796	13727916	13727856	ENSG00000199407.1	+	rRNA	KNOWN	RNA5SP301	1	1	0.457987
chr10	13729383	13756200	13742791	ENSG00000234091.1	+	antisense	KNOWN	RP11-353M9.1	1	3	0.260317
chr10	13870797	13871175	13870986	ENSG00000215227.4	+	processed_pseudogene	KNOWN	NUTF2P5	1	1	0.329571
chr10	13991815	14007526	13999670	ENSG00000229751.1	+	antisense	KNOWN	RP11-142M10.2	1	3	0.321474
chr10	14074284	14087605	14080944	ENSG00000235410.1	+	antisense	KNOWN	RP11-397C18.2	1	3	0.248717
chr10	14383200	14383277	14383238	ENSG00000266321.1	-	miRNA	KNOWN	MIR4293	1	1	0.133019
chr10	14391875	14392196	14392035	ENSG00000278100.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.205394
chr10	14436576	14436661	14436618	ENSG00000221371.1	+	miRNA	KNOWN	MIR1265	1	1	-0.401048
chr10	14518557	14774897	14646727	ENSG00000065809.13	-	protein_coding	KNOWN	FAM107B	29	6	-0.013827
chr10	14652742	14661691	14657216	ENSG00000236495.1	+	antisense	KNOWN	RP11-7C6.1	1	3	-0.175112
chr10	14663395	14663494	14663444	ENSG00000201766.1	-	rRNA	KNOWN	RNA5SP302	1	1	-0.175112
chr10	14723171	14724055	14723613	ENSG00000237032.1	-	processed_pseudogene	KNOWN	RPSAP7	1	1	0.012703
chr10	14819250	14838575	14828912	ENSG00000185267.9	-	protein_coding	KNOWN	CDNF	5	6	-0.072810
chr10	14838164	14871741	14854952	ENSG00000187522.13	+	protein_coding	KNOWN	HSPA14	6	14	-0.063589
chr10	14877688	14878686	14878187	ENSG00000272853.1	-	lincRNA	KNOWN	RP11-398C13.6	1	1	0.101037
chr10	14878820	14904315	14891567	ENSG00000152455.15	+	protein_coding	KNOWN	SUV39H2	8	6	-0.003567
chr10	14897359	14954432	14925895	ENSG00000152457.17	-	protein_coding	KNOWN	DCLRE1C	16	16	0.033353
chr10	14959439	14988050	14973744	ENSG00000197889.9	+	protein_coding	KNOWN	MEIG1	5	3	0.227592
chr10	14986942	14987515	14987228	ENSG00000235623.2	-	unprocessed_pseudogene	KNOWN	OR7E110P	1	1	0.108480
chr10	14999050	15000055	14999552	ENSG00000228547.5	-	unprocessed_pseudogene	KNOWN	OR7E26P	1	1	-0.089074
chr10	15007861	15008884	15008372	ENSG00000182531.7	-	unprocessed_pseudogene	KNOWN	OR7E115P	1	1	-0.089074
chr10	15015370	15021863	15018616	ENSG00000237470.3	-	unprocessed_pseudogene	KNOWN	DCLRE1CP1	1	5	-0.065837
chr10	15032227	15073852	15053039	ENSG00000152463.14	+	protein_coding	KNOWN	OLAH	8	9	0.131210
chr10	15077523	15088776	15083149	ENSG00000176244.6	-	protein_coding	KNOWN	ACBD7	2	4	-0.015537
chr10	15093263	15093611	15093437	ENSG00000228312.1	-	processed_pseudogene	KNOWN	GAPDHP45	1	1	0.375164
chr10	15095385	15097319	15096352	ENSG00000176236.6	-	antisense	KNOWN	C10orf111	1	2	0.375164
chr10	15097180	15139818	15118499	ENSG00000152464.14	+	protein_coding	KNOWN	RPP38	7	5	0.285718
chr10	15102584	15168693	15135638	ENSG00000152465.17	-	protein_coding	KNOWN	NMT2	5	13	0.293870
chr10	15154802	15155320	15155061	ENSG00000206448.3	-	processed_pseudogene	KNOWN	PPIAP30	1	1	0.468555
chr10	15171036	15171278	15171157	ENSG00000228181.1	-	processed_pseudogene	KNOWN	RP11-455B2.9	1	1	0.251470
chr10	15211643	15371062	15291352	ENSG00000148468.16	-	protein_coding	KNOWN	FAM171A1	3	8	0.307533
chr10	15237492	15241767	15239629	ENSG00000232739.1	+	antisense	KNOWN	RP11-25G10.2	1	2	0.192059
chr10	15513949	15720125	15617037	ENSG00000077943.7	-	protein_coding	KNOWN	ITGA8	3	30	-0.141072
chr10	15778170	15860520	15819345	ENSG00000148481.13	-	protein_coding	KNOWN	FAM188A	6	15	-0.211429
chr10	16005808	16005923	16005865	ENSG00000252537.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.197515
chr10	16071416	16071809	16071612	ENSG00000237913.1	-	processed_pseudogene	KNOWN	FTLP19	1	1	-0.459548
chr10	16207821	16207927	16207874	ENSG00000201260.1	-	snRNA	KNOWN	RNU6-1075P	1	1	-0.006862
chr10	16278701	16295858	16287279	ENSG00000226140.5	+	lincRNA	KNOWN	RP11-461K13.1	2	4	-0.347048
chr10	16436943	16513745	16475344	ENSG00000165983.14	+	protein_coding	KNOWN	PTER	5	6	-0.206054
chr10	16476003	16476164	16476083	ENSG00000223156.1	+	snRNA	KNOWN	RNU2-18P	1	1	-0.140454
chr10	16513743	16522005	16517874	ENSG00000165985.9	-	protein_coding	KNOWN	C1QL3	2	3	-0.544633
chr10	16590611	16817528	16704069	ENSG00000148484.17	-	protein_coding	KNOWN	RSU1	5	9	0.022588
chr10	16721352	16748377	16734864	ENSG00000225213.2	-	sense_intronic	KNOWN	RP11-197M22.2	1	3	0.070230
chr10	16767235	16767416	16767325	ENSG00000275001.1	+	misc_RNA	NOVEL	uc_338	1	1	0.023686
chr10	16823964	17129831	16976897	ENSG00000107611.14	-	protein_coding	KNOWN	CUBN	4	67	0.148216
chr10	17137336	17137585	17137460	ENSG00000273153.1	-	lincRNA	KNOWN	RP11-406H21.2	1	1	0.227219
chr10	17142254	17202054	17172154	ENSG00000107614.21	-	protein_coding	KNOWN	TRDMT1	12	12	0.056392
chr10	17214239	17229985	17222112	ENSG00000229124.6	-	antisense	KNOWN	VIM-AS1	2	4	0.177568
chr10	17228259	17237593	17232926	ENSG00000026025.13	+	protein_coding	KNOWN	VIM	10	10	0.490316
chr10	17233325	17234833	17234079	ENSG00000234961.1	-	antisense	KNOWN	RP11-124N14.3	1	2	0.561975
chr10	17318383	17454330	17386356	ENSG00000148488.15	-	protein_coding	KNOWN	ST8SIA6	2	8	0.021250
chr10	17386936	17413503	17400219	ENSG00000204832.9	+	antisense	KNOWN	ST8SIA6-AS1	4	4	-0.110498
chr10	17403508	17403620	17403564	ENSG00000251803.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.231797
chr10	17577362	17578212	17577787	ENSG00000236582.1	+	processed_pseudogene	KNOWN	PRPF38AP2	1	1	0.133019
chr10	17589032	17617377	17603204	ENSG00000165996.13	-	protein_coding	KNOWN	HACD1	6	7	-0.026370
chr10	17602910	17603127	17603018	ENSG00000280126.2	+	pseudogene	NOVEL	AC069542.1	1	2	-0.114459
chr10	17641284	17643878	17642581	ENSG00000260589.1	-	antisense	KNOWN	STAM-AS1	1	1	0.329320
chr10	17644125	17715914	17680019	ENSG00000136738.14	+	protein_coding	KNOWN	STAM	5	14	-0.012242
chr10	17695709	17700232	17697970	ENSG00000229190.1	-	antisense	KNOWN	RP11-390B4.3	1	3	-0.014267
chr10	17752252	17800868	17776560	ENSG00000148483.8	+	protein_coding	KNOWN	TMEM236	1	4	0.197238
chr10	17809344	17911170	17860257	ENSG00000260314.2	+	protein_coding	KNOWN	MRC1	1	30	-0.252631
chr10	17832409	17832705	17832557	ENSG00000281531.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.171043
chr10	17845107	17845193	17845150	ENSG00000207938.1	+	miRNA	KNOWN	MIR511	1	1	-0.171043
chr10	17862887	17865471	17864179	ENSG00000235637.1	-	antisense	KNOWN	RP11-457D2.3	1	2	-0.392042
chr10	17951839	18043292	17997565	ENSG00000148482.11	+	protein_coding	KNOWN	SLC39A12	4	13	-0.244212
chr10	18001786	18010562	18006174	ENSG00000226083.5	-	antisense	KNOWN	SLC39A12-AS1	2	5	-0.300351
chr10	18140677	18541869	18341273	ENSG00000165995.18	+	protein_coding	KNOWN	CACNB2	16	14	-0.224877
chr10	18206127	18261194	18233660	ENSG00000235020.4	-	processed_transcript	KNOWN	RP11-109I13.2	5	4	-0.109654
chr10	18513115	18545651	18529383	ENSG00000240291.1	-	antisense	KNOWN	RP11-499P20.2	2	5	-0.162083
chr10	18531849	18533336	18532592	ENSG00000225527.1	-	antisense	KNOWN	RP11-383B4.4	1	2	-0.073067
chr10	18545561	18659285	18602423	ENSG00000241058.3	-	protein_coding	KNOWN	NSUN6	8	11	0.073303
chr10	18659405	18681639	18670522	ENSG00000165997.4	+	protein_coding	KNOWN	ARL5B	1	6	-0.242930
chr10	18735745	18738631	18737188	ENSG00000225509.1	+	processed_pseudogene	KNOWN	AIFM1P1	1	2	-0.116250
chr10	18746433	18747853	18747143	ENSG00000234244.1	+	lincRNA	KNOWN	RP11-139J15.5	1	2	-0.116250
chr10	18940501	18940953	18940727	ENSG00000234813.1	+	processed_pseudogene	KNOWN	RP11-288D15.1	1	1	-0.584469
chr10	19048771	19790401	19419586	ENSG00000204740.9	+	protein_coding	KNOWN	MALRD1	7	40	-0.502795
chr10	19051455	19052170	19051812	ENSG00000226255.1	+	processed_pseudogene	KNOWN	UBE2V2P1	1	2	-0.423846
chr10	19290223	19291480	19290851	ENSG00000227734.1	-	antisense	KNOWN	RP11-49L2.1	1	2	-0.625973
chr10	19489101	19489400	19489250	ENSG00000239539.1	+	processed_pseudogene	KNOWN	HMGN1P20	1	1	-0.899880
chr10	19491072	19491299	19491185	ENSG00000236960.1	-	processed_pseudogene	KNOWN	RP11-265G8.3	1	1	-0.446874
chr10	19598247	19598463	19598355	ENSG00000200545.2	+	snoRNA	NOVEL	U3	1	1	-0.076885
chr10	19633683	19633812	19633747	ENSG00000252001.1	-	rRNA	KNOWN	RNA5SP303	1	1	-0.786446
chr10	19710328	19728550	19719439	ENSG00000233968.6	-	antisense	KNOWN	RP11-354E11.2	3	5	-0.288913
chr10	19747823	19748621	19748222	ENSG00000230818.1	+	processed_pseudogene	KNOWN	MTND2P16	1	1	-0.225623
chr10	19783557	19783660	19783608	ENSG00000212072.1	-	miRNA	NOVEL	AL353147.1	1	1	-0.079054
chr10	19792998	19793101	19793049	ENSG00000252832.1	-	snRNA	KNOWN	RNU6-1212P	1	1	-0.306172
chr10	19816239	20289856	20053047	ENSG00000120594.16	+	protein_coding	KNOWN	PLXDC2	3	14	-0.425587
chr10	20070805	20091784	20081294	ENSG00000238246.1	-	antisense	KNOWN	RP11-575A19.2	1	2	-0.687456
chr10	20350049	20351100	20350574	ENSG00000228339.1	+	processed_pseudogene	KNOWN	AMD1P1	1	2	-0.542553
chr10	20547171	20547422	20547296	ENSG00000270727.1	+	processed_pseudogene	KNOWN	RP11-51E20.1	1	1	-0.360135
chr10	20551970	20552046	20552008	ENSG00000265372.1	+	miRNA	KNOWN	MIR4675	1	1	-0.366496
chr10	20779973	21174187	20977080	ENSG00000078114.18	-	protein_coding	KNOWN	NEBL	13	28	-0.431232
chr10	20804293	20804577	20804435	ENSG00000235940.1	+	processed_pseudogene	KNOWN	MTND1P21	1	1	-0.543734
chr10	20841375	20841560	20841467	ENSG00000230112.1	+	processed_pseudogene	KNOWN	RP11-56H7.2	1	1	-0.743970
chr10	21028999	21030792	21029895	ENSG00000228753.1	+	processed_pseudogene	KNOWN	EIF4BP2	1	1	-0.255342
chr10	21110682	21113388	21112035	ENSG00000228219.1	+	processed_pseudogene	KNOWN	NPM1P30	1	2	-0.765497
chr10	21125763	21146559	21136161	ENSG00000204683.10	-	protein_coding	KNOWN	C10orf113	2	2	-0.358016
chr10	21174014	21175048	21174531	ENSG00000231920.1	+	antisense	KNOWN	NEBL-AS1	2	2	-0.259994
chr10	21217891	21218279	21218085	ENSG00000228860.1	+	processed_pseudogene	KNOWN	RP11-565H13.3	1	1	-0.063659
chr10	21247752	21248095	21247923	ENSG00000232853.1	+	processed_pseudogene	KNOWN	LUZP4P1	1	1	-0.035764
chr10	21321961	21322067	21322014	ENSG00000207264.1	+	snRNA	KNOWN	RNU6-15P	1	1	0.276775
chr10	21340233	21372950	21356591	ENSG00000230109.1	-	lincRNA	KNOWN	RP11-275N1.1	1	5	0.172687
chr10	21394033	21394592	21394312	ENSG00000231553.1	+	processed_pseudogene	KNOWN	RNMTL1P1	1	1	0.358067
chr10	21452197	21452412	21452304	ENSG00000278650.1	+	unprocessed_pseudogene	KNOWN	RP11-275N1.3	1	1	0.368832
chr10	21455236	21455515	21455375	ENSG00000273566.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.368832
chr10	21481716	21481817	21481766	ENSG00000199222.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.091992
chr10	21492658	21497262	21494960	ENSG00000204682.5	-	protein_coding	KNOWN	CASC10	1	2	0.179455
chr10	21496562	21496641	21496601	ENSG00000222071.1	-	miRNA	KNOWN	MIR1915	1	1	0.179455
chr10	21513478	21526368	21519923	ENSG00000180592.16	-	protein_coding	KNOWN	SKIDA1	4	4	0.229495
chr10	21524675	21743630	21634152	ENSG00000078403.16	+	protein_coding	KNOWN	MLLT10	17	24	0.076686
chr10	21564471	21564577	21564524	ENSG00000207347.1	-	snRNA	KNOWN	RNU6-306P	1	1	0.448784
chr10	21624592	21626286	21625439	ENSG00000223984.1	-	processed_pseudogene	KNOWN	HNRNPRP1	1	1	0.029061
chr10	21661635	21661741	21661688	ENSG00000201390.1	-	snRNA	KNOWN	RNU6-1141P	1	1	0.052892
chr10	21756537	22003769	21880153	ENSG00000136770.10	-	protein_coding	KNOWN	DNAJC1	5	12	-0.165667
chr10	21785292	21785587	21785439	ENSG00000252634.1	+	misc_RNA	KNOWN	RN7SKP219	1	1	0.002050
chr10	21865335	21865921	21865628	ENSG00000279623.1	-	sense_intronic	KNOWN	RP11-399C16.3	1	1	-0.290952
chr10	21933143	21933438	21933290	ENSG00000201364.1	+	misc_RNA	KNOWN	RN7SKP37	1	1	-0.213944
chr10	22162992	22165794	22164393	ENSG00000232497.1	+	processed_pseudogene	KNOWN	ADIPOR1P1	1	3	-0.465620
chr10	22163092	22164306	22163699	ENSG00000236777.1	+	processed_pseudogene	KNOWN	RP11-108B14.1	1	2	-0.465620
chr10	22208814	22210021	22209417	ENSG00000223601.2	-	protein_coding	KNOWN	EBLN1	1	1	-0.447241
chr10	22218074	22221168	22219621	ENSG00000260205.1	+	lincRNA	KNOWN	RP11-108B14.5	1	1	-0.618502
chr10	22225698	22226024	22225861	ENSG00000227462.1	+	processed_pseudogene	KNOWN	RP11-108B14.4	1	1	-0.618502
chr10	22252072	22254589	22253330	ENSG00000279631.1	+	TEC	KNOWN	RP11-573G6.4	1	1	-0.067949
chr10	22257786	22258548	22258167	ENSG00000261671.1	+	lincRNA	KNOWN	RP11-573G6.6	1	1	-0.067949
chr10	22266991	22267346	22267168	ENSG00000233318.2	+	processed_pseudogene	KNOWN	RP11-573G6.2	1	1	-0.067949
chr10	22315974	22320308	22318141	ENSG00000148444.15	+	protein_coding	KNOWN	COMMD3	15	8	-0.480796
chr10	22316388	22329542	22322965	ENSG00000269897.5	+	protein_coding	KNOWN	COMMD3-BMI1	6	14	-0.480796
chr10	22321211	22331484	22326347	ENSG00000168283.13	+	protein_coding	KNOWN	BMI1	10	10	-0.416266
chr10	22332404	22332987	22332695	ENSG00000272516.1	+	lincRNA	KNOWN	RP11-573G6.9	1	1	-0.034385
chr10	22332587	22332981	22332784	ENSG00000271981.1	-	lincRNA	KNOWN	RP11-573G6.8	1	1	-0.034385
chr10	22340377	22340615	22340496	ENSG00000272366.1	-	lincRNA	KNOWN	RP11-573G6.10	1	1	-0.034385
chr10	22345445	22454224	22399834	ENSG00000077327.15	+	protein_coding	KNOWN	SPAG6	9	11	-0.357898
chr10	22361172	22413067	22387119	ENSG00000233451.1	+	sense_overlapping	KNOWN	RP11-301N24.3	1	2	-0.557496
chr10	22534849	22714555	22624702	ENSG00000150867.13	-	protein_coding	KNOWN	PIP4K2A	8	10	-0.025144
chr10	22693953	22694639	22694296	ENSG00000279819.1	-	TEC	KNOWN	RP11-142L16.2	1	1	-0.014923
chr10	22787393	22787499	22787446	ENSG00000206842.1	+	snRNA	KNOWN	RNU6-413P	1	1	-0.069472
chr10	22928024	23038523	22983273	ENSG00000165309.13	+	protein_coding	KNOWN	ARMC3	13	19	-0.318168
chr10	22997255	22997358	22997306	ENSG00000223131.1	+	rRNA	KNOWN	RNA5SP304	1	1	-0.544633
chr10	23074383	23074478	23074430	ENSG00000221221.1	-	miRNA	NOVEL	AL139815.1	1	1	0.020042
chr10	23095506	23122013	23108759	ENSG00000148450.12	+	protein_coding	KNOWN	MSRB2	3	5	-0.094399
chr10	23136924	23137661	23137292	ENSG00000229932.3	+	processed_pseudogene	KNOWN	YWHAZP3	1	1	-0.142473
chr10	23166985	23167101	23167043	ENSG00000252049.1	+	snoRNA	NOVEL	SNORA40	1	1	-0.154520
chr10	23192327	23194252	23193289	ENSG00000168267.5	+	protein_coding	KNOWN	PTF1A	1	2	-0.268598
chr10	23203816	23239816	23221816	ENSG00000204566.6	-	lincRNA	KNOWN	LINC01552	1	4	-0.493471
chr10	23258211	23258545	23258378	ENSG00000227537.1	+	processed_pseudogene	KNOWN	RP11-215C7.3	1	1	-0.130401
chr10	23267195	23344845	23306020	ENSG00000179133.11	-	protein_coding	KNOWN	C10orf67	2	9	-0.167505
chr10	23343957	23345181	23344569	ENSG00000224215.1	+	antisense	KNOWN	RP11-371A19.2	1	2	0.100870
chr10	23393405	23393467	23393436	ENSG00000264574.1	+	miRNA	KNOWN	MIR1254-2	1	1	-0.027590
chr10	23439458	23442390	23440924	ENSG00000165312.6	+	protein_coding	KNOWN	OTUD1	1	1	0.164596
chr10	23694746	24547848	24121297	ENSG00000120549.16	+	protein_coding	KNOWN	KIAA1217	16	21	-0.293552
chr10	23718087	23718188	23718137	ENSG00000276037.1	+	miRNA	NOVEL	AL355977.1	1	1	-0.673543
chr10	24157835	24158781	24158308	ENSG00000223928.1	+	processed_pseudogene	KNOWN	RP11-183E9.2	1	1	-0.030264
chr10	24255246	24255333	24255289	ENSG00000277563.1	+	misc_RNA	NOVEL	PRINS	1	1	-0.188686
chr10	24275685	24275781	24275733	ENSG00000207930.1	+	miRNA	KNOWN	MIR603	1	1	0.109270
chr10	24481180	24483034	24482107	ENSG00000279029.1	-	TEC	KNOWN	RP11-144I2.1	1	1	-0.392130
chr10	24583609	24723668	24653638	ENSG00000107863.16	-	protein_coding	KNOWN	ARHGAP21	17	26	0.016525
chr10	24640166	24640284	24640225	ENSG00000199535.1	+	rRNA	KNOWN	RNA5SP305	1	1	0.005692
chr10	24848607	24952604	24900605	ENSG00000099256.18	-	protein_coding	KNOWN	PRTFDC1	3	9	0.173604
chr10	24867645	24868190	24867917	ENSG00000228667.1	+	processed_pseudogene	KNOWN	RP11-129O7.2	1	2	0.018369
chr10	24908522	24908812	24908667	ENSG00000240294.2	-	misc_RNA	KNOWN	RN7SKP241	1	1	0.276732
chr10	24953241	24953513	24953377	ENSG00000273107.1	+	lincRNA	KNOWN	RP11-165A20.3	1	1	0.100925
chr10	24981979	25062279	25022129	ENSG00000151023.16	-	protein_coding	KNOWN	ENKUR	5	7	-0.147661
chr10	25016658	25026664	25021661	ENSG00000185875.12	+	protein_coding	KNOWN	THNSL1	2	3	-0.411775
chr10	25091456	25091554	25091505	ENSG00000266069.1	-	miRNA	NOVEL	AL139821.1	1	1	-0.152546
chr10	25113058	25161236	25137147	ENSG00000231422.2	+	lincRNA	KNOWN	LINC01516	1	7	-0.123863
chr10	25158072	25176276	25167174	ENSG00000233642.1	-	antisense	KNOWN	GPR158-AS1	1	2	-0.298532
chr10	25175062	25602226	25388644	ENSG00000151025.9	+	protein_coding	KNOWN	GPR158	3	11	-0.581235
chr10	25244061	25244854	25244457	ENSG00000274242.1	-	unprocessed_pseudogene	KNOWN	RP11-20I6.1	1	2	-0.966902
chr10	25393557	25393844	25393700	ENSG00000222543.1	-	misc_RNA	KNOWN	RN7SKP220	1	1	-0.599886
chr10	25647570	25648104	25647837	ENSG00000227465.1	-	processed_pseudogene	KNOWN	GPN3P1	1	1	-0.256673
chr10	25651712	25732935	25692323	ENSG00000280809.2	+	lincRNA	KNOWN	LINC00836	4	5	-0.255463
chr10	25691537	25692323	25691930	ENSG00000271563.1	+	processed_pseudogene	KNOWN	HIRAP1	1	1	-0.032815
chr10	25813811	25813917	25813864	ENSG00000223019.1	-	rRNA	KNOWN	RNA5SP306	1	1	-0.676683
chr10	25819363	25819426	25819394	ENSG00000251711.1	-	snRNA	KNOWN	RNU6-632P	1	1	-0.676683
chr10	25924448	25933710	25929079	ENSG00000226304.1	-	antisense	KNOWN	RP11-435M3.2	1	4	-0.251122
chr10	25934267	26212527	26073397	ENSG00000095777.14	+	protein_coding	KNOWN	MYO3A	6	35	-0.484265
chr10	26159494	26159545	26159519	ENSG00000273952.1	-	miRNA	NOVEL	AL360217.1	1	1	-0.153765
chr10	26216307	26304558	26260432	ENSG00000136750.11	+	protein_coding	KNOWN	GAD2	4	17	-0.184947
chr10	26438203	26567803	26503003	ENSG00000077420.15	+	protein_coding	KNOWN	APBB1IP	3	15	-0.075895
chr10	26509589	26509704	26509646	ENSG00000199733.1	+	rRNA	KNOWN	RNA5SP307	1	1	-0.163005
chr10	26577676	26579095	26578385	ENSG00000236894.2	-	lincRNA	KNOWN	RP11-128B16.3	1	2	-0.225748
chr10	26589865	26594330	26592097	ENSG00000233261.2	+	lincRNA	KNOWN	LINC00264	1	4	-0.521780
chr10	26643228	26645016	26644122	ENSG00000234296.1	+	lincRNA	KNOWN	RP13-16H11.7	1	2	-0.260461
chr10	26647986	26653454	26650720	ENSG00000231976.7	+	lincRNA	KNOWN	LINC00202-2	4	5	-0.124129
chr10	26664206	26676159	26670182	ENSG00000227932.1	-	lincRNA	KNOWN	RP13-16H11.2	1	3	-0.157452
chr10	26695091	26697625	26696358	ENSG00000279212.1	-	TEC	KNOWN	RP13-16H11.8	1	1	-0.278191
chr10	26697659	26746798	26722228	ENSG00000148459.15	+	protein_coding	KNOWN	PDSS1	4	12	0.092606
chr10	26714622	26715832	26715227	ENSG00000234788.1	+	processed_pseudogene	KNOWN	HSPA8P3	1	3	0.276416
chr10	26717635	26718778	26718206	ENSG00000235843.1	+	antisense	KNOWN	RP13-16H11.5	1	2	0.276416
chr10	26746593	26861087	26803840	ENSG00000136754.16	-	protein_coding	KNOWN	ABI1	13	12	-0.093320
chr10	26789017	26789157	26789087	ENSG00000223027.1	+	snoRNA	NOVEL	SNORA57	1	1	-0.466637
chr10	26790540	26790646	26790593	ENSG00000206605.1	-	snRNA	KNOWN	RNU6-946P	1	1	0.166846
chr10	26931206	26942001	26936603	ENSG00000232224.5	-	lincRNA	KNOWN	LINC00202-1	3	5	-0.164348
chr10	26943323	26944418	26943870	ENSG00000236983.1	-	lincRNA	KNOWN	LINC00614	1	2	-0.164348
chr10	26991914	27100498	27046206	ENSG00000107890.16	-	protein_coding	KNOWN	ANKRD26	6	34	-0.213391
chr10	27088321	27088427	27088374	ENSG00000199855.1	-	snRNA	KNOWN	RNU6-490P	1	1	-0.104405
chr10	27110112	27155266	27132689	ENSG00000136758.18	-	protein_coding	KNOWN	YME1L1	9	21	0.081244
chr10	27154824	27186924	27170874	ENSG00000120539.14	+	protein_coding	KNOWN	MASTL	4	12	0.242889
chr10	27193358	27193500	27193429	ENSG00000252639.1	-	snRNA	KNOWN	RNU2-24P	1	1	0.116239
chr10	27195214	27242130	27218672	ENSG00000107897.18	-	protein_coding	KNOWN	ACBD5	8	13	-0.001804
chr10	27232255	27232316	27232285	ENSG00000251839.1	-	snRNA	KNOWN	RNU7-12P	1	1	-0.167395
chr10	27235917	27236000	27235958	ENSG00000263577.1	-	miRNA	NOVEL	AL160291.1	1	1	-0.167395
chr10	27243130	27250804	27246967	ENSG00000262412.1	+	lincRNA	KNOWN	RP11-85G18.6	1	2	-0.155053
chr10	27246350	27259455	27252902	ENSG00000230445.4	-	transcribed_processed_pseudogene	KNOWN	LRRC37A6P	4	4	-0.082497
chr10	27258762	27288824	27273793	ENSG00000238021.6	+	transcribed_unprocessed_pseudogene	KNOWN	ARMC4P1	2	4	-0.501566
chr10	27313723	27316587	27315155	ENSG00000278830.1	+	unprocessed_pseudogene	KNOWN	RP11-748L13.7	1	2	-0.489056
chr10	27315120	27315226	27315173	ENSG00000200369.1	+	snRNA	KNOWN	RNU6-666P	1	1	-0.489056
chr10	27331357	27341252	27336304	ENSG00000215409.4	-	unprocessed_pseudogene	KNOWN	RP11-748L13.2	1	6	-0.365357
chr10	27335501	27335607	27335554	ENSG00000207135.1	-	snRNA	KNOWN	RNU6-452P	1	1	-0.365357
chr10	27343436	27344917	27344176	ENSG00000260151.1	+	lincRNA	KNOWN	RP11-748L13.6	1	2	-0.365357
chr10	27349717	27350290	27350003	ENSG00000213770.3	-	processed_pseudogene	KNOWN	FAM210CP	1	1	-0.343869
chr10	27378138	27378362	27378250	ENSG00000237956.1	-	processed_pseudogene	KNOWN	TRIAP1P1	1	1	-0.077933
chr10	27398187	27414368	27406277	ENSG00000182077.10	-	protein_coding	KNOWN	PTCHD3	2	5	-0.151455
chr10	27504174	27542237	27523205	ENSG00000099246.16	+	protein_coding	KNOWN	RAB18	9	9	-0.283601
chr10	27672875	27746060	27709467	ENSG00000150051.13	-	protein_coding	KNOWN	MKX	4	7	0.197241
chr10	27744786	27767794	27756290	ENSG00000230500.1	+	antisense	KNOWN	MKX-AS1	2	3	0.551175
chr10	27783846	27784053	27783949	ENSG00000251810.1	-	misc_RNA	KNOWN	RN7SKP132	1	1	0.030591
chr10	27812164	27999048	27905606	ENSG00000169126.15	-	protein_coding	KNOWN	ARMC4	6	20	0.043054
chr10	27904209	27905162	27904685	ENSG00000226016.1	+	processed_pseudogene	KNOWN	RPL36AP55	1	2	-0.167528
chr10	27999788	28049615	28024701	ENSG00000233472.1	+	lincRNA	KNOWN	RP11-218D6.4	1	4	-0.064249
chr10	28004702	28004932	28004817	ENSG00000226395.1	+	processed_pseudogene	KNOWN	RP11-218D6.3	1	1	0.306731
chr10	28050993	28334486	28192739	ENSG00000150054.18	-	protein_coding	KNOWN	MPP7	8	19	0.033927
chr10	28289258	28289350	28289304	ENSG00000275036.1	-	miRNA	KNOWN	MIR8086	1	1	0.073730
chr10	28303300	28307658	28305479	ENSG00000282996.1	+	lincRNA	KNOWN	RP11-351M16.4	1	3	0.116514
chr10	28310853	28310959	28310906	ENSG00000222374.1	+	miRNA	NOVEL	AC022021.1	1	1	0.285716
chr10	28338554	28340942	28339748	ENSG00000237746.1	-	processed_pseudogene	KNOWN	ZNF101P1	1	3	-0.163509
chr10	28408039	28408251	28408145	ENSG00000222666.2	-	snoRNA	NOVEL	U3	1	1	-0.024150
chr10	28433008	28495813	28464410	ENSG00000237128.1	-	lincRNA	KNOWN	RP11-351M16.3	1	3	-0.045878
chr10	28436201	28437078	28436639	ENSG00000224439.2	+	processed_pseudogene	KNOWN	RPSAP10	1	1	0.334353
chr10	28442575	28442896	28442735	ENSG00000222705.1	-	misc_RNA	KNOWN	RN7SKP39	1	1	0.334353
chr10	28522652	28532743	28527697	ENSG00000254635.5	-	antisense	KNOWN	WAC-AS1	2	3	-0.009821
chr10	28532493	28623112	28577802	ENSG00000095787.21	+	protein_coding	KNOWN	WAC	21	14	0.004741
chr10	28652630	28652755	28652692	ENSG00000252401.1	+	snRNA	KNOWN	RNU4ATAC6P	1	1	0.459724
chr10	28658987	28659467	28659227	ENSG00000231911.1	+	processed_pseudogene	KNOWN	TPRKBP1	1	1	0.459724
chr10	28667919	28668025	28667972	ENSG00000207483.1	+	snRNA	KNOWN	RNU6-1067P	1	1	0.459724
chr10	28677342	28682939	28680140	ENSG00000095739.10	+	protein_coding	KNOWN	BAMBI	2	3	0.427061
chr10	28743745	28744663	28744204	ENSG00000236716.1	+	lincRNA	KNOWN	RP11-478H13.1	1	2	0.068276
chr10	28760699	28760803	28760751	ENSG00000201001.1	-	snRNA	KNOWN	RNU6-270P	1	1	-0.169548
chr10	28789188	28796113	28792650	ENSG00000235824.4	-	lincRNA	KNOWN	LINC00837	4	3	-0.099364
chr10	28792668	28808219	28800443	ENSG00000232624.6	+	processed_transcript	KNOWN	LINC01517	4	6	-0.080710
chr10	28806121	28813458	28809789	ENSG00000271220.1	+	transcribed_processed_pseudogene	KNOWN	RP11-478H13.4	2	3	0.028969
chr10	28846408	28881898	28864153	ENSG00000204365.5	+	lincRNA	KNOWN	C10orf126	2	5	-0.109540
chr10	28874393	28874507	28874450	ENSG00000199402.1	-	rRNA	KNOWN	RNA5SP308	1	1	-0.009888
chr10	28898996	28899484	28899240	ENSG00000229605.5	-	processed_pseudogene	KNOWN	RP11-492M23.2	1	1	-0.031997
chr10	29289061	29318328	29303694	ENSG00000120563.8	+	protein_coding	KNOWN	LYZL1	2	5	-0.237579
chr10	29409402	29487745	29448573	ENSG00000224597.9	+	antisense	KNOWN	SVIL-AS1	12	4	0.242975
chr10	29421476	29422012	29421744	ENSG00000274985.1	-	unprocessed_pseudogene	KNOWN	PTCHD3P1	1	1	0.236382
chr10	29457338	29736781	29597059	ENSG00000197321.14	-	protein_coding	KNOWN	SVIL	13	38	0.094868
chr10	29545004	29545097	29545050	ENSG00000207612.1	-	miRNA	KNOWN	MIR604	1	1	0.390515
chr10	29575306	29575381	29575343	ENSG00000212411.1	+	snoRNA	NOVEL	SNORD115	1	1	-0.129035
chr10	29602264	29602346	29602305	ENSG00000216035.1	-	miRNA	KNOWN	MIR938	1	1	0.071528
chr10	29697935	29698174	29698054	ENSG00000225976.5	+	processed_pseudogene	KNOWN	RP11-192N10.2	1	1	-0.161224
chr10	29711915	29712008	29711961	ENSG00000222092.1	+	snRNA	KNOWN	RNU6-908P	1	1	0.083003
chr10	29891032	29891467	29891249	ENSG00000237936.1	-	processed_pseudogene	KNOWN	RP11-224P11.1	1	1	0.004529
chr10	30012800	30115494	30064147	ENSG00000165757.8	-	protein_coding	KNOWN	KIAA1462	3	4	0.077964
chr10	30299569	30299673	30299621	ENSG00000200887.1	-	snRNA	KNOWN	RNU6-598P	1	1	-0.237132
chr10	30301823	30302072	30301947	ENSG00000230125.1	-	processed_pseudogene	KNOWN	EEF1A1P39	1	1	-0.237132
chr10	30302826	30306066	30304446	ENSG00000259994.1	-	sense_overlapping	KNOWN	RP11-305E6.4	1	1	-0.237132
chr10	30309801	30374448	30342124	ENSG00000107951.12	-	protein_coding	KNOWN	MTPAP	5	17	-0.152268
chr10	30353706	30357365	30355535	ENSG00000250833.1	+	unprocessed_pseudogene	KNOWN	DNM1P17	1	3	-0.004970
chr10	30364410	30374386	30369398	ENSG00000241621.1	-	unprocessed_pseudogene	KNOWN	GOLGA2P6	1	14	0.044920
chr10	30365067	30365148	30365107	ENSG00000220997.1	-	miRNA	NOVEL	AL161651.1	1	1	-0.004970
chr10	30366064	30366299	30366181	ENSG00000239625.3	-	misc_RNA	KNOWN	RN7SL241P	1	1	-0.004970
chr10	30368597	30368665	30368631	ENSG00000276347.1	-	miRNA	KNOWN	MIR7162	1	1	-0.004970
chr10	30380174	30381062	30380618	ENSG00000214434.2	+	processed_pseudogene	KNOWN	NIFKP1	1	1	0.108480
chr10	30383400	30383622	30383511	ENSG00000235679.1	+	processed_pseudogene	KNOWN	RP11-449I17.9	1	1	0.108480
chr10	30403197	30403776	30403486	ENSG00000224473.1	-	processed_pseudogene	KNOWN	CCND3P1	1	1	0.297311
chr10	30433937	30461833	30447885	ENSG00000107968.9	+	protein_coding	KNOWN	MAP3K8	7	9	0.150324
chr10	30517616	30518861	30518238	ENSG00000213778.2	-	processed_pseudogene	KNOWN	HNRNPA1P32	1	2	0.399173
chr10	30553854	30554483	30554168	ENSG00000228800.1	-	lincRNA	KNOWN	RP11-253D19.1	1	2	0.052246
chr10	30555601	30555904	30555752	ENSG00000239744.3	-	misc_RNA	KNOWN	RN7SL63P	1	1	0.052246
chr10	30576699	30580182	30578440	ENSG00000230298.1	+	lincRNA	KNOWN	RP11-253D19.2	1	2	-0.074200
chr10	30611779	30629762	30620770	ENSG00000151033.8	-	protein_coding	KNOWN	LYZL2	1	5	0.114360
chr10	30655489	30657535	30656512	ENSG00000230998.1	+	lincRNA	KNOWN	RP11-14C22.3	1	3	-0.216761
chr10	30671566	30717266	30694416	ENSG00000234814.7	+	transcribed_unprocessed_pseudogene	KNOWN	SVILP1	2	18	-0.088902
chr10	30723251	30723740	30723495	ENSG00000230720.1	+	lincRNA	KNOWN	RP11-14C22.6	1	2	0.106713
chr10	30820207	31031937	30926072	ENSG00000183621.15	-	protein_coding	KNOWN	ZNF438	9	9	-0.018881
chr10	30831828	30833387	30832607	ENSG00000272914.1	-	sense_intronic	KNOWN	RP11-330O11.3	1	1	0.514807
chr10	30919012	30921235	30920123	ENSG00000237135.1	-	processed_pseudogene	KNOWN	DDX10P1	1	2	-0.225623
chr10	31065951	31066047	31065999	ENSG00000263578.1	-	miRNA	NOVEL	AL359546.1	1	1	0.059931
chr10	31187883	31261910	31224896	ENSG00000272381.1	+	lincRNA	KNOWN	RP11-192P3.4	1	2	-0.129765
chr10	31206278	31320447	31263362	ENSG00000237036.4	-	antisense	KNOWN	ZEB1-AS1	9	3	-0.149755
chr10	31259599	31259704	31259651	ENSG00000252479.1	+	rRNA	KNOWN	RNA5SP309	1	1	0.012557
chr10	31318495	31529814	31424154	ENSG00000148516.21	+	protein_coding	KNOWN	ZEB1	25	13	-0.130534
chr10	31360955	31361215	31361085	ENSG00000230397.1	+	transcribed_processed_pseudogene	KNOWN	SPTLC1P1	1	1	-0.514863
chr10	31604600	31606218	31605409	ENSG00000223834.2	+	lincRNA	KNOWN	RP11-472N13.2	1	2	0.333000
chr10	31628540	31628599	31628569	ENSG00000231855.1	-	unprocessed_pseudogene	KNOWN	GLUDP5	1	1	0.309144
chr10	31651354	31651450	31651402	ENSG00000223243.2	-	miRNA	NOVEL	AL161935.1	1	1	0.243995
chr10	31693084	31707388	31700236	ENSG00000237797.1	-	lincRNA	KNOWN	RP11-472N13.3	1	2	-0.156396
chr10	31756042	31756136	31756089	ENSG00000222412.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.362444
chr10	31805404	31928876	31867140	ENSG00000165322.17	-	protein_coding	KNOWN	ARHGAP12	10	20	0.014161
chr10	31913143	31913754	31913448	ENSG00000231148.1	+	processed_pseudogene	KNOWN	HMGB1P7	1	1	0.299797
chr10	31983885	31984554	31984219	ENSG00000230240.1	+	processed_pseudogene	KNOWN	RP11-241I20.1	1	2	0.378463
chr10	31992087	31992381	31992234	ENSG00000239731.3	-	misc_RNA	KNOWN	RN7SL825P	1	1	0.122365
chr10	32009010	32056431	32032720	ENSG00000170759.10	-	protein_coding	KNOWN	KIF5B	2	26	0.325051
chr10	32056746	32056839	32056792	ENSG00000206660.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.396432
chr10	32102522	32103293	32102907	ENSG00000234335.1	-	processed_pseudogene	KNOWN	RPS4XP11	1	1	0.337971
chr10	32109861	32111666	32110763	ENSG00000235113.1	+	processed_pseudogene	KNOWN	RP11-241I20.4	1	2	0.414597
chr10	32111644	32111789	32111716	ENSG00000234811.1	-	processed_pseudogene	KNOWN	RP11-241I20.5	1	1	0.420940
chr10	32173684	32173744	32173714	ENSG00000252482.1	+	snRNA	KNOWN	RNU7-22P	1	1	0.269779
chr10	32188323	32188817	32188570	ENSG00000217094.2	-	processed_pseudogene	KNOWN	PPIAP31	1	1	0.269779
chr10	32231849	32232245	32232047	ENSG00000233190.1	-	processed_pseudogene	KNOWN	RPS24P13	1	1	-0.038069
chr10	32266289	32269474	32267881	ENSG00000227253.3	+	antisense	KNOWN	RP11-166N17.1	2	4	0.181722
chr10	32267751	32378798	32323274	ENSG00000120616.15	-	protein_coding	KNOWN	EPC1	10	15	0.219887
chr10	32281686	32282829	32282257	ENSG00000226842.1	+	antisense	KNOWN	RP11-166N17.3	1	2	0.200768
chr10	32346499	32347179	32346839	ENSG00000233825.1	+	antisense	KNOWN	RP11-135A24.4	1	2	0.163942
chr10	32346864	32346946	32346905	ENSG00000222309.1	-	miRNA	NOVEL	AL391839.1	1	1	0.163942
chr10	32347397	32374488	32360942	ENSG00000229327.1	+	antisense	KNOWN	RP11-135A24.2	1	2	0.345458
chr10	32394558	32394665	32394611	ENSG00000200484.1	-	snRNA	KNOWN	RNU6-1244P	1	1	0.109479
chr10	32446140	32574564	32510352	ENSG00000216937.11	+	protein_coding	KNOWN	CCDC7	11	18	-0.226849
chr10	32511336	32511737	32511536	ENSG00000231245.2	-	processed_pseudogene	KNOWN	C1DP1	1	1	0.002050
chr10	32543369	32583286	32563327	ENSG00000279242.1	+	processed_transcript	KNOWN	RP11-195O1.5	1	6	-0.255148
chr10	32567723	32882874	32725298	ENSG00000150076.22	+	protein_coding	KNOWN	CCDC7	5	23	-0.262367
chr10	32887255	32889311	32888283	ENSG00000273038.2	-	lincRNA	KNOWN	RP11-479G22.8	1	1	-0.123737
chr10	32900319	33005792	32953055	ENSG00000150093.18	-	protein_coding	KNOWN	ITGB1	19	16	0.002259
chr10	32944481	32944999	32944740	ENSG00000228816.1	+	processed_pseudogene	KNOWN	AK3P5	1	1	-0.028638
chr10	32958845	33082102	33020473	ENSG00000229656.6	+	lincRNA	KNOWN	RP11-462L8.1	2	4	0.074128
chr10	33023368	33023647	33023507	ENSG00000234163.1	-	processed_pseudogene	KNOWN	MTND4LP11	1	1	0.100029
chr10	33034655	33034924	33034789	ENSG00000265319.2	-	misc_RNA	KNOWN	RN7SL847P	1	1	-0.112022
chr10	33035469	33035664	33035566	ENSG00000229878.1	-	processed_pseudogene	KNOWN	RP11-479G22.7	1	1	-0.112022
chr10	33057615	33058407	33058011	ENSG00000235962.5	-	processed_pseudogene	KNOWN	RP11-462L8.2	1	1	0.196522
chr10	33096257	33116672	33106464	ENSG00000233387.1	-	lincRNA	KNOWN	RP11-342D11.3	1	2	0.251066
chr10	33098535	33098636	33098585	ENSG00000263576.1	-	miRNA	NOVEL	AL121748.1	1	1	0.279195
chr10	33177492	33336262	33256877	ENSG00000099250.17	-	protein_coding	KNOWN	NRP1	14	18	0.151245
chr10	33211277	33213804	33212540	ENSG00000238258.1	+	antisense	KNOWN	RP11-342D11.2	1	2	0.254842
chr10	33288304	33288601	33288452	ENSG00000244356.3	-	misc_RNA	KNOWN	RN7SL398P	1	1	0.099941
chr10	33341655	33341905	33341780	ENSG00000273012.1	+	lincRNA	KNOWN	RP11-90B22.1	1	1	0.434384
chr10	33578931	33600040	33589485	ENSG00000226412.1	-	lincRNA	KNOWN	RP11-476F14.1	1	4	-0.023880
chr10	33684755	33687064	33685909	ENSG00000203565.2	+	lincRNA	KNOWN	RP13-259N13.2	1	2	-0.036650
chr10	33759713	33772658	33766185	ENSG00000261683.1	-	lincRNA	KNOWN	LINC00838	1	3	-0.194195
chr10	33864313	33864723	33864518	ENSG00000226407.1	+	processed_pseudogene	KNOWN	RPL23P11	1	1	-0.253936
chr10	33909238	33917804	33913521	ENSG00000223470.3	+	lincRNA	KNOWN	RP11-490O24.2	1	5	-0.262853
chr10	34109560	34815325	34462442	ENSG00000148498.15	-	protein_coding	KNOWN	PARD3	14	25	-0.029822
chr10	34201979	34202074	34202026	ENSG00000199200.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.299433
chr10	34488583	34488878	34488730	ENSG00000234167.1	-	processed_pseudogene	KNOWN	TCEB2P4	1	1	0.091992
chr10	34663859	34664101	34663980	ENSG00000229235.1	-	processed_pseudogene	KNOWN	RP11-8L18.3	1	1	0.178032
chr10	34675635	34676041	34675838	ENSG00000215184.2	-	processed_pseudogene	KNOWN	RP11-8L18.2	1	1	0.214674
chr10	34815767	34816386	34816076	ENSG00000226386.1	+	antisense	KNOWN	PARD3-AS1	1	2	0.159807
chr10	34875210	34875422	34875316	ENSG00000232525.1	+	processed_pseudogene	KNOWN	SS18L2P1	1	1	-0.030865
chr10	34926775	34926882	34926828	ENSG00000223047.1	+	snRNA	KNOWN	RNU6-847P	1	1	0.427061
chr10	34942969	34943075	34943022	ENSG00000222909.1	+	snRNA	KNOWN	RNU6-193P	1	1	0.398653
chr10	34965069	34966259	34965664	ENSG00000213724.4	+	processed_pseudogene	KNOWN	PRDX2P2	1	3	0.367626
chr10	34969909	34975578	34972743	ENSG00000283000.1	+	lincRNA	KNOWN	RP11-297A16.4	2	3	0.325865
chr10	35008551	35090642	35049596	ENSG00000108094.14	-	protein_coding	KNOWN	CUL2	10	22	0.013830
chr10	35079598	35079680	35079639	ENSG00000266228.1	-	miRNA	KNOWN	MIR3611	1	1	0.310632
chr10	35098006	35127020	35112513	ENSG00000230534.6	-	antisense	KNOWN	RP11-297A16.2	3	5	0.142655
chr10	35126791	35212958	35169874	ENSG00000095794.19	+	protein_coding	KNOWN	CREM	48	10	-0.176373
chr10	35135443	35135502	35135472	ENSG00000253054.1	+	snRNA	KNOWN	RNU7-77P	1	1	-0.229936
chr10	35158306	35158640	35158473	ENSG00000233343.1	+	processed_pseudogene	KNOWN	ATP6V1G1P4	1	1	-0.263489
chr10	35210416	35210750	35210583	ENSG00000269952.1	+	sense_intronic	KNOWN	RP11-324I22.3	1	1	-0.011959
chr10	35219894	35230598	35225246	ENSG00000233200.1	-	lincRNA	KNOWN	RP11-324I22.2	1	2	-0.007120
chr10	35231331	35231394	35231362	ENSG00000253070.1	-	snRNA	KNOWN	RNU6-794P	1	1	0.074504
chr10	35247025	35572669	35409847	ENSG00000108100.17	+	protein_coding	KNOWN	CCNY	10	12	0.157271
chr10	35250959	35251052	35251005	ENSG00000200097.1	-	snRNA	KNOWN	RNU6-1167P	1	1	-0.055162
chr10	35314552	35336401	35325476	ENSG00000271335.5	-	antisense	KNOWN	RP11-324I22.4	2	4	0.414334
chr10	35605410	35608935	35607172	ENSG00000177291.3	+	protein_coding	KNOWN	GJD4	1	2	-0.287245
chr10	35606001	35608153	35607077	ENSG00000273312.1	-	antisense	KNOWN	RP11-425A6.5	1	1	-0.287245
chr10	35638249	35642278	35640263	ENSG00000177283.5	-	protein_coding	KNOWN	FZD8	1	1	-0.141207
chr10	35641172	35641252	35641212	ENSG00000264780.1	-	miRNA	KNOWN	MIR4683	1	1	-0.141207
chr10	35697300	35698037	35697668	ENSG00000226646.1	+	processed_pseudogene	KNOWN	RPL7P37	1	1	-0.201205
chr10	35778302	35800920	35789611	ENSG00000280719.1	+	lincRNA	KNOWN	PCAT5	1	3	-0.011452
chr10	35896874	35898963	35897918	ENSG00000227313.1	-	lincRNA	KNOWN	RP11-309N24.1	1	2	0.106639
chr10	36089086	36089389	36089237	ENSG00000227475.1	-	lincRNA	KNOWN	RP11-810B23.1	1	2	-0.028302
chr10	36432882	36434484	36433683	ENSG00000236626.1	-	processed_pseudogene	KNOWN	MTND5P17	1	1	-0.342636
chr10	36434710	36435174	36434942	ENSG00000228694.1	-	processed_pseudogene	KNOWN	MTND4P18	1	1	-0.342636
chr10	36438616	36442392	36440504	ENSG00000237002.6	+	lincRNA	KNOWN	RP11-92J19.3	2	3	-0.342636
chr10	36438661	36438788	36438724	ENSG00000274458.1	+	snoRNA	NOVEL	SNORA40	1	1	-0.342636
chr10	36521721	36524234	36522977	ENSG00000229644.6	-	processed_pseudogene	KNOWN	NAMPTP1	1	1	-0.164107
chr10	36626015	36626138	36626076	ENSG00000207271.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.538774
chr10	36940109	36943932	36942020	ENSG00000238176.1	+	lincRNA	KNOWN	RP11-322I2.1	1	2	-0.561450
chr10	36944111	36944738	36944424	ENSG00000233533.1	-	processed_pseudogene	KNOWN	MKNK2P1	1	1	-0.561450
chr10	36995023	36995585	36995304	ENSG00000225355.1	+	processed_pseudogene	KNOWN	ARL6IP1P2	1	1	-0.312398
chr10	37125788	37384111	37254949	ENSG00000148513.17	+	protein_coding	KNOWN	ANKRD30A	5	42	-0.487499
chr10	37135237	37135343	37135290	ENSG00000206796.1	+	snRNA	KNOWN	RNU6-811P	1	1	-0.325928
chr10	37240887	37242049	37241468	ENSG00000234918.1	+	lincRNA	KNOWN	RP11-20F24.2	1	3	-0.782477
chr10	37248118	37315801	37281959	ENSG00000240800.1	+	transcribed_unprocessed_pseudogene	KNOWN	ATP8A2P1	1	6	-0.337145
chr10	37297398	37297689	37297543	ENSG00000244402.3	+	misc_RNA	KNOWN	RN7SL314P	1	1	-0.302484
chr10	37303000	37303109	37303054	ENSG00000252621.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.302484
chr10	37309185	37347031	37328108	ENSG00000235687.8	+	lincRNA	KNOWN	LINC00993	3	5	-0.360628
chr10	37337415	37338871	37338143	ENSG00000237970.1	+	processed_pseudogene	KNOWN	TMEM161BP1	1	1	-0.220598
chr10	37348616	37349572	37349094	ENSG00000236313.1	+	processed_pseudogene	KNOWN	VN1R53P	1	1	-0.220598
chr10	37523011	37544701	37533856	ENSG00000224920.1	+	unprocessed_pseudogene	KNOWN	TACC1P1	1	5	-0.297668
chr10	37600796	37601368	37601082	ENSG00000225276.1	-	processed_pseudogene	KNOWN	MTND1P18	1	1	-0.309525
chr10	37601440	37602974	37602207	ENSG00000256892.2	-	protein_coding	KNOWN	MTRNR2L7	1	1	-0.309525
chr10	37775371	37784131	37779751	ENSG00000226578.1	-	lincRNA	KNOWN	RP11-258F22.1	1	3	-0.238981
chr10	37776526	37858106	37817316	ENSG00000198105.11	-	protein_coding	KNOWN	ZNF248	9	7	-0.192489
chr10	37791580	37791937	37791758	ENSG00000260137.1	+	lincRNA	KNOWN	RP11-258F22.2	1	1	-0.271756
chr10	37794276	37796109	37795192	ENSG00000225192.1	-	processed_pseudogene	KNOWN	ZNF33BP1	1	1	-0.271756
chr10	37818606	37820982	37819794	ENSG00000228828.1	-	processed_pseudogene	KNOWN	RP11-162G10.1	1	2	-0.111803
chr10	37831889	37831971	37831930	ENSG00000266800.1	+	miRNA	NOVEL	AL135791.1	1	1	-0.175941
chr10	37857740	37859110	37858425	ENSG00000236514.1	+	antisense	KNOWN	RP11-162G10.5	1	2	-0.159547
chr10	37883594	37884109	37883851	ENSG00000151963.4	+	unprocessed_pseudogene	KNOWN	ZNF37CP	1	2	-0.147679
chr10	37894637	37896666	37895651	ENSG00000235197.1	+	processed_pseudogene	KNOWN	ZNF33AP1	1	1	-0.282688
chr10	37949572	37976633	37963102	ENSG00000175395.15	-	protein_coding	KNOWN	ZNF25	3	7	0.081573
chr10	37976825	37992467	37984646	ENSG00000226447.1	+	lincRNA	KNOWN	RP11-393J16.4	1	3	-0.001615
chr10	37994863	37994975	37994919	ENSG00000206840.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.199239
chr10	38010650	38065088	38037869	ENSG00000189180.15	+	protein_coding	KNOWN	ZNF33A	8	6	-0.052034
chr10	38043873	38043975	38043924	ENSG00000252132.1	-	snRNA	KNOWN	RNU6-795P	1	1	0.074070
chr10	38068449	38068694	38068571	ENSG00000275675.1	-	unprocessed_pseudogene	KNOWN	RP11-1021O19.2	1	1	-0.296279
chr10	38080056	38080877	38080466	ENSG00000226086.5	-	processed_pseudogene	KNOWN	EIF3LP3	1	1	0.161033
chr10	38091764	38092051	38091907	ENSG00000235964.1	-	processed_pseudogene	KNOWN	FXYD6P2	1	1	0.246714
chr10	38094336	38125544	38109940	ENSG00000075407.17	+	protein_coding	KNOWN	ZNF37A	5	8	0.076949
chr10	38137337	38144399	38140868	ENSG00000272983.1	+	lincRNA	KNOWN	RP11-508N22.12	1	1	-0.197515
chr10	38149968	38150293	38150130	ENSG00000273019.1	+	lincRNA	KNOWN	RP11-508N22.13	1	1	-0.327285
chr10	38161570	38161749	38161659	ENSG00000225965.1	+	processed_pseudogene	KNOWN	RP11-508N22.6	1	1	-0.340968
chr10	38164648	38212357	38188502	ENSG00000224761.3	+	lincRNA	KNOWN	RP11-508N22.9	2	7	-0.446852
chr10	38186670	38186771	38186720	ENSG00000236309.1	+	processed_pseudogene	KNOWN	RP11-508N22.10	1	1	-0.550852
chr10	38247922	38333155	38290538	ENSG00000226113.1	+	lincRNA	KNOWN	RP11-672F9.1	1	3	-0.401562
chr10	38250442	38250603	38250522	ENSG00000234941.1	-	processed_pseudogene	KNOWN	RP11-508N22.11	1	1	-0.357619
chr10	38356380	38378505	38367442	ENSG00000099251.14	+	transcribed_unprocessed_pseudogene	KNOWN	HSD17B7P2	2	9	-0.549653
chr10	38383069	38402916	38392992	ENSG00000120555.13	-	transcribed_unprocessed_pseudogene	KNOWN	SEPT7P9	3	4	-0.779728
chr10	38403189	38452153	38427671	ENSG00000276805.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-291L22.9	2	18	-0.003898
chr10	38423625	38423728	38423676	ENSG00000222314.1	+	snRNA	KNOWN	RNU6-1118P	1	1	0.076644
chr10	38452987	38455365	38454176	ENSG00000228882.1	-	processed_pseudogene	KNOWN	CICP9	1	3	0.367270
chr10	38453181	38466176	38459678	ENSG00000203496.8	+	lincRNA	KNOWN	RP11-291L22.4	2	4	0.367270
chr10	38601418	38605609	38603513	ENSG00000215151.4	+	unprocessed_pseudogene	KNOWN	ABCD1P2	1	4	0.621413
chr10	38617255	38617344	38617299	ENSG00000277133.1	+	processed_pseudogene	KNOWN	RP11-453N3.7	1	1	0.250057
chr10	38635908	38638082	38636995	ENSG00000225638.1	+	processed_pseudogene	KNOWN	PABPC1P12	1	1	-0.458776
chr10	38640971	38689068	38665019	ENSG00000233867.2	-	unprocessed_pseudogene	KNOWN	SLC9B1P3	1	9	-0.344286
chr10	38696424	38697902	38697163	ENSG00000227264.3	+	processed_pseudogene	KNOWN	ACTR3BP5	1	1	-0.588548
chr10	38713195	38719229	38716212	ENSG00000234541.2	+	unprocessed_pseudogene	KNOWN	CHEK2P5	1	3	-0.101689
chr10	38762095	38762491	38762293	ENSG00000227679.1	-	processed_pseudogene	KNOWN	RP11-453N3.1	1	1	-0.260889
chr10	38783004	38783108	38783056	ENSG00000233832.1	+	processed_pseudogene	KNOWN	RP11-96F8.1	1	1	-0.698370
chr10	42149310	42149549	42149429	ENSG00000229485.1	-	processed_pseudogene	KNOWN	KSR1P1	1	1	-0.643413
chr10	42185339	42185791	42185565	ENSG00000237592.2	+	IG_V_pseudogene	KNOWN	IGKV1OR10-1	1	2	0.074125
chr10	42209990	42210383	42210186	ENSG00000271650.1	+	processed_pseudogene	KNOWN	AL031601.4	1	1	-0.183390
chr10	42242721	42276842	42259781	ENSG00000274167.4	+	transcribed_unprocessed_pseudogene	KNOWN	AL031601.5	2	3	-0.349143
chr10	42279734	42281819	42280776	ENSG00000228755.1	-	processed_pseudogene	KNOWN	PABPC1P8	1	1	-0.245043
chr10	42331866	42367974	42349920	ENSG00000215146.4	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-313J2.1	4	3	-0.334965
chr10	42409727	42454385	42432056	ENSG00000182632.14	-	translated_unprocessed_pseudogene	KNOWN	CCNYL2	1	10	-0.317144
chr10	42470082	42470268	42470175	ENSG00000279239.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-178A10.3	1	1	0.231849
chr10	42475543	42495336	42485439	ENSG00000185904.11	+	lincRNA	KNOWN	LINC00839	2	5	0.184289
chr10	42513510	42552822	42533166	ENSG00000234420.7	-	transcribed_processed_pseudogene	KNOWN	ZNF37BP	4	8	-0.237153
chr10	42555440	42555724	42555582	ENSG00000270762.1	+	processed_pseudogene	KNOWN	FXYD6P1	1	1	-0.204250
chr10	42566677	42567483	42567080	ENSG00000233837.1	+	processed_pseudogene	KNOWN	EIF3LP2	1	1	-0.204250
chr10	42574185	42638568	42606376	ENSG00000196693.14	-	protein_coding	KNOWN	ZNF33B	8	6	-0.304665
chr10	42578500	42578727	42578613	ENSG00000277479.1	+	unprocessed_pseudogene	KNOWN	AL022345.10	1	1	-0.349607
chr10	42579724	42579858	42579791	ENSG00000272319.2	+	unprocessed_pseudogene	KNOWN	AL022345.7	1	1	-0.349607
chr10	42583241	42583375	42583308	ENSG00000272387.2	+	unprocessed_pseudogene	KNOWN	AL022345.11	1	1	-0.349607
chr10	42605158	42605263	42605210	ENSG00000251783.1	+	snRNA	KNOWN	RNU6-1170P	1	1	-0.434637
chr10	42660728	42661776	42661252	ENSG00000232109.1	+	processed_pseudogene	KNOWN	AL022344.2	1	1	-0.245043
chr10	42674197	42691723	42682960	ENSG00000233515.1	-	lincRNA	KNOWN	LINC01518	1	4	-0.443297
chr10	42694371	42714575	42704473	ENSG00000231009.1	-	unprocessed_pseudogene	KNOWN	CUBNP1	1	10	-0.360122
chr10	42696035	42706453	42701244	ENSG00000234864.1	+	lincRNA	KNOWN	AL022344.5	1	3	-0.375401
chr10	42725857	42737159	42731508	ENSG00000230425.1	+	unprocessed_pseudogene	KNOWN	RSU1P1	1	4	-0.234556
chr10	42747544	42748687	42748115	ENSG00000270552.1	-	unprocessed_pseudogene	KNOWN	DUXAP3	1	2	-0.192104
chr10	42751178	42752145	42751661	ENSG00000259869.1	-	lincRNA	KNOWN	AL022344.7	1	1	-0.149016
chr10	42782801	42834937	42808869	ENSG00000165733.7	+	protein_coding	KNOWN	BMS1	1	23	0.045531
chr10	42832447	42832550	42832498	ENSG00000252416.1	-	snRNA	KNOWN	RNU6-885P	1	1	0.005056
chr10	42871521	42874060	42872790	ENSG00000234944.1	+	lincRNA	KNOWN	RP11-124O11.1	1	2	0.158081
chr10	42979017	42981507	42980262	ENSG00000229630.1	-	lincRNA	KNOWN	LINC01264	1	3	0.293626
chr10	42997563	42997681	42997622	ENSG00000263795.1	+	miRNA	KNOWN	MIR5100	1	1	0.007517
chr10	43077027	43130351	43103689	ENSG00000165731.17	+	protein_coding	KNOWN	RET	5	20	0.427455
chr10	43136824	43138334	43137579	ENSG00000273008.1	-	lincRNA	KNOWN	RP11-351D16.3	1	1	0.251648
chr10	43138486	43185308	43161897	ENSG00000169826.7	+	protein_coding	KNOWN	CSGALNACT2	1	8	0.019012
chr10	43194535	43266919	43230727	ENSG00000198915.11	-	protein_coding	KNOWN	RASGEF1A	5	13	0.375968
chr10	43323665	43327932	43325798	ENSG00000224265.1	+	lincRNA	KNOWN	RP11-168L22.2	1	3	0.313164
chr10	43341786	43341910	43341848	ENSG00000221468.1	+	snRNA	KNOWN	RNU6ATAC11P	1	1	0.000361
chr10	43371642	43376335	43373988	ENSG00000150201.14	+	protein_coding	KNOWN	FXYD4	4	9	0.601547
chr10	43385617	43409166	43397391	ENSG00000169813.16	-	protein_coding	KNOWN	HNRNPF	7	4	0.283709
chr10	43417249	43417438	43417343	ENSG00000221400.2	-	snoRNA	NOVEL	U3	1	1	0.313071
chr10	43420738	43422100	43421419	ENSG00000230555.2	+	lincRNA	KNOWN	RP11-517P14.2	1	2	0.313071
chr10	43436841	43483179	43460010	ENSG00000243660.9	+	protein_coding	KNOWN	ZNF487	6	4	0.337377
chr10	43458065	43458129	43458097	ENSG00000252532.1	+	snRNA	KNOWN	RNU7-193P	1	1	0.343176
chr10	43523256	43525217	43524236	ENSG00000236114.1	+	unprocessed_pseudogene	KNOWN	RP11-517P14.7	1	1	-0.113869
chr10	43556344	43574618	43565481	ENSG00000196793.13	-	protein_coding	KNOWN	ZNF239	5	4	-0.123240
chr10	43604843	43606251	43605547	ENSG00000232004.1	-	processed_pseudogene	KNOWN	CAP1P2	1	1	-0.187081
chr10	43606407	43617903	43612155	ENSG00000198298.12	+	protein_coding	KNOWN	ZNF485	4	5	-0.041893
chr10	43628817	43674703	43651760	ENSG00000223910.1	+	antisense	KNOWN	ZNF32-AS3	1	5	0.122497
chr10	43630882	43631564	43631223	ENSG00000237389.1	-	lincRNA	KNOWN	RP11-402L1.4	1	2	-0.138014
chr10	43630947	43631382	43631164	ENSG00000238263.1	+	processed_pseudogene	KNOWN	RP11-402L1.12	1	1	-0.138014
chr10	43643859	43648856	43646357	ENSG00000169740.13	-	protein_coding	KNOWN	ZNF32	3	3	-0.138014
chr10	43643872	43645047	43644459	ENSG00000226245.1	+	antisense	KNOWN	ZNF32-AS1	1	2	-0.138014
chr10	43645942	43648019	43646980	ENSG00000230565.1	+	antisense	KNOWN	ZNF32-AS2	1	3	-0.138014
chr10	43665668	43667005	43666336	ENSG00000228426.1	+	lincRNA	KNOWN	RP11-402L1.11	1	2	0.395998
chr10	43728217	43728728	43728472	ENSG00000271173.1	+	processed_pseudogene	KNOWN	RP11-272J7.6	1	1	0.304986
chr10	43732334	43732584	43732459	ENSG00000224162.1	+	processed_pseudogene	KNOWN	UQCRHP3	1	1	-0.074018
chr10	43741437	43742350	43741893	ENSG00000223746.1	-	processed_pseudogene	KNOWN	TCEB1P30	1	2	-0.074018
chr10	43777562	43778825	43778193	ENSG00000234973.5	-	lincRNA	KNOWN	RP11-272J7.4	2	2	0.011821
chr10	43789249	43790387	43789818	ENSG00000226790.3	-	processed_pseudogene	KNOWN	HNRNPA3P1	1	1	0.062038
chr10	43845306	43850622	43847964	ENSG00000204187.5	+	lincRNA	KNOWN	LINC00619	1	3	0.228225
chr10	43859411	43895433	43877422	ENSG00000226808.1	+	lincRNA	KNOWN	LINC00840	1	5	0.446831
chr10	43901365	43912326	43906845	ENSG00000236769.1	-	lincRNA	KNOWN	RP11-168P8.5	1	2	0.249083
chr10	43912444	43914236	43913340	ENSG00000227029.1	+	lincRNA	KNOWN	RP11-168P8.3	1	2	-0.055907
chr10	43939003	43944466	43941734	ENSG00000233395.1	+	lincRNA	KNOWN	LINC00841	1	5	0.317652
chr10	44034540	44034611	44034575	ENSG00000238957.1	+	miRNA	NOVEL	AL512640.1	1	1	0.000361
chr10	44259602	44261813	44260707	ENSG00000237590.1	-	lincRNA	KNOWN	RP11-20J15.2	1	2	0.247910
chr10	44282926	44293709	44288317	ENSG00000229116.2	-	lincRNA	KNOWN	RP11-20J15.3	2	2	0.115393
chr10	44292569	44294649	44293609	ENSG00000277288.3	+	protein_coding	KNOWN	C10orf142	2	3	0.295525
chr10	44370165	44386493	44378329	ENSG00000107562.16	-	protein_coding	KNOWN	CXCL12	8	4	0.207469
chr10	44414649	44415153	44414901	ENSG00000214089.3	-	processed_pseudogene	KNOWN	RP11-256K7.1	1	1	-0.021390
chr10	44488335	44488445	44488390	ENSG00000270767.1	-	processed_pseudogene	KNOWN	RP11-733D4.2	1	1	0.395136
chr10	44591208	44602104	44596656	ENSG00000234580.1	-	lincRNA	KNOWN	RP11-733D4.1	1	2	0.084497
chr10	44806443	44808223	44807333	ENSG00000227395.1	+	processed_pseudogene	KNOWN	EIF2AP4	1	1	0.130466
chr10	44811024	44959689	44885356	ENSG00000224812.2	-	antisense	KNOWN	TMEM72-AS1	1	8	0.225422
chr10	44899614	44920220	44909917	ENSG00000234504.2	-	antisense	KNOWN	RP11-285G1.2	1	3	0.295933
chr10	44911200	44937002	44924101	ENSG00000187783.11	+	protein_coding	KNOWN	TMEM72	3	5	0.332616
chr10	44937508	44955725	44946616	ENSG00000223462.2	+	lincRNA	KNOWN	RP11-285G1.9	1	2	0.156933
chr10	44958917	44959458	44959187	ENSG00000273363.1	-	sense_intronic	KNOWN	RP11-285G1.14	1	1	-0.173668
chr10	44959407	44995891	44977649	ENSG00000107551.20	+	protein_coding	KNOWN	RASSF4	12	11	0.264118
chr10	44970981	44978810	44974895	ENSG00000165507.8	-	protein_coding	KNOWN	C10orf10	3	2	0.429027
chr10	44997698	45000888	44999293	ENSG00000165511.6	-	antisense	KNOWN	C10orf25	1	2	0.491348
chr10	45000475	45005326	45002900	ENSG00000165512.4	+	protein_coding	KNOWN	ZNF22	1	2	0.491348
chr10	45002222	45076066	45039144	ENSG00000226937.9	-	transcribed_processed_pseudogene	KNOWN	CEP164P1	7	7	-0.280209
chr10	45016080	45147221	45081650	ENSG00000277757.4	-	processed_transcript	KNOWN	RP11-285G1.15	3	8	-0.347449
chr10	45055656	45056268	45055962	ENSG00000270258.1	+	processed_pseudogene	KNOWN	DUXAP4	1	1	-0.864507
chr10	45073146	45073541	45073343	ENSG00000228462.1	-	processed_pseudogene	KNOWN	RP11-445N18.3	1	1	0.002355
chr10	45099487	45154596	45127041	ENSG00000232554.8	-	transcribed_unprocessed_pseudogene	KNOWN	RSU1P2	4	9	-0.329726
chr10	45127318	45148914	45138116	ENSG00000235690.2	+	unprocessed_pseudogene	KNOWN	CUBNP3	1	10	-0.305769
chr10	45147394	45171389	45159391	ENSG00000243349.2	+	processed_transcript	KNOWN	RP11-445N18.7	1	11	-0.109337
chr10	45151445	45151915	45151680	ENSG00000236442.1	-	processed_pseudogene	KNOWN	ANKRD54P1	1	1	-0.057234
chr10	45156775	45176925	45166850	ENSG00000230501.1	+	unprocessed_pseudogene	KNOWN	ANKRD30BP3	1	7	-0.213205
chr10	45164014	45164088	45164051	ENSG00000263476.1	+	miRNA	KNOWN	MIR3156-1	1	1	-0.057234
chr10	45164228	45181427	45172827	ENSG00000227683.1	-	lincRNA	KNOWN	RP11-445N18.5	1	2	-0.358745
chr10	45180400	45180616	45180508	ENSG00000275312.1	+	unprocessed_pseudogene	KNOWN	RP11-432I13.5	1	1	-0.511005
chr10	45187292	45198323	45192807	ENSG00000278531.1	-	unprocessed_pseudogene	KNOWN	RP11-432I13.6	1	5	-0.617527
chr10	45188790	45188896	45188843	ENSG00000207071.1	-	snRNA	KNOWN	RNU6-1207P	1	1	-0.511005
chr10	45232026	45247361	45239693	ENSG00000234993.1	-	unprocessed_pseudogene	KNOWN	CUBNP2	1	7	-0.027590
chr10	45258185	45259123	45258654	ENSG00000224402.1	+	unitary_pseudogene	KNOWN	OR6D1P	1	1	0.000651
chr10	45302654	45315608	45309131	ENSG00000256574.6	-	protein_coding	KNOWN	OR13A1	3	4	-0.318360
chr10	45374176	45446119	45410147	ENSG00000012779.10	+	protein_coding	KNOWN	ALOX5	8	14	-0.084369
chr10	45444570	45453121	45448845	ENSG00000231964.1	-	antisense	KNOWN	RP11-67C2.2	1	3	0.230952
chr10	45454585	45594906	45524745	ENSG00000165406.15	-	protein_coding	KNOWN	MARCH8	7	8	-0.045472
chr10	45615501	45672780	45644140	ENSG00000172671.19	-	protein_coding	KNOWN	ZFAND4	9	11	-0.161664
chr10	45678692	45700532	45689612	ENSG00000230869.1	+	unprocessed_pseudogene	KNOWN	AGAP10P	1	7	-0.179908
chr10	45706431	45727231	45716831	ENSG00000237840.6	-	transcribed_unprocessed_pseudogene	KNOWN	FAM21FP	4	11	0.209998
chr10	45725694	45726038	45725866	ENSG00000228702.1	-	processed_pseudogene	KNOWN	RP11-671E7.1	1	1	0.307005
chr10	45727200	45792961	45760080	ENSG00000172661.17	+	protein_coding	KNOWN	FAM21C	10	31	0.131423
chr10	45812648	45812944	45812796	ENSG00000270434.1	-	processed_pseudogene	KNOWN	RP11-175I17.6	1	1	0.061618
chr10	45815428	45817324	45816376	ENSG00000231122.5	-	transcribed_unprocessed_pseudogene	KNOWN	FAM25E	2	2	0.061618
chr10	45825594	45853875	45839734	ENSG00000188234.13	-	protein_coding	KNOWN	AGAP4	8	10	-0.080181
chr10	45854093	45972154	45913123	ENSG00000239883.8	-	transcribed_unprocessed_pseudogene	KNOWN	PARGP1	3	12	0.050320
chr10	45856307	45856422	45856364	ENSG00000239152.1	+	rRNA	KNOWN	RNA5SP310	1	1	-0.057018
chr10	45940522	45940851	45940686	ENSG00000264217.2	+	processed_pseudogene	KNOWN	RPL35AP25	1	1	0.178407
chr10	45972449	46003734	45988091	ENSG00000265354.3	+	protein_coding	KNOWN	TIMM23	1	7	0.174052
chr10	45984610	45984810	45984710	ENSG00000265733.1	+	snoRNA	NOVEL	SNORA74	1	1	0.008576
chr10	46005088	46030714	46017901	ENSG00000266412.5	-	protein_coding	KNOWN	NCOA4	7	12	-0.019620
chr10	46033307	46046269	46039788	ENSG00000263639.5	-	protein_coding	KNOWN	MSMB	2	4	0.129662
chr10	46063250	46063715	46063482	ENSG00000280012.2	+	processed_pseudogene	KNOWN	RPL23AP61	1	1	-0.026190
chr10	46109621	46131358	46120489	ENSG00000264204.2	+	unprocessed_pseudogene	KNOWN	AGAP7P	1	8	-0.178019
chr10	46233885	46273557	46253721	ENSG00000263482.3	-	unprocessed_pseudogene	KNOWN	ANTXRLP1	1	14	0.347019
chr10	46286345	46330207	46308276	ENSG00000274209.4	+	protein_coding	KNOWN	ANTXRL	6	20	0.349777
chr10	46337224	46358714	46347969	ENSG00000279058.1	+	protein_coding	KNOWN	CTGLF11P	1	9	0.117540
chr10	46369113	46373563	46371338	ENSG00000273225.4	+	transcribed_unprocessed_pseudogene	KNOWN	FAM25BP	3	3	0.337579
chr10	46370759	46382626	46376692	ENSG00000279458.2	+	processed_transcript	KNOWN	CH17-335B8.4	2	5	0.427176
chr10	46375627	46537864	46456745	ENSG00000264230.7	+	protein_coding	KNOWN	ANXA8L1	8	12	0.350524
chr10	46415853	46416413	46416133	ENSG00000213412.3	+	processed_pseudogene	KNOWN	HNRNPA1P33	1	1	0.120281
chr10	46461099	46465881	46463490	ENSG00000204174.6	-	protein_coding	KNOWN	NPY4R	3	3	0.332390
chr10	46549044	46555530	46552287	ENSG00000204175.5	-	protein_coding	KNOWN	GPRIN2	2	3	0.471241
chr10	46578217	46594173	46586195	ENSG00000204176.13	+	protein_coding	KNOWN	SYT15	6	9	0.330805
chr10	46582782	46598145	46590463	ENSG00000231187.2	-	antisense	KNOWN	RP11-38L15.3	2	2	0.354152
chr10	46597918	46612154	46605036	ENSG00000229227.8	+	lincRNA	KNOWN	RP11-38L15.2	8	4	0.324062
chr10	46610474	46652025	46631249	ENSG00000165874.12	-	transcribed_unprocessed_pseudogene	KNOWN	FAM35BP	2	7	-0.123817
chr10	46632387	46635472	46633929	ENSG00000272430.1	+	lincRNA	KNOWN	RP11-38L15.8	1	4	-0.179035
chr10	46634911	46635466	46635188	ENSG00000229927.2	-	processed_pseudogene	KNOWN	RHEBP1	1	1	-0.179035
chr10	46648948	46649276	46649112	ENSG00000274186.1	+	misc_RNA	KNOWN	RN7SL248P	1	1	-0.179035
chr10	46753605	46759740	46756672	ENSG00000280913.2	+	transcribed_unprocessed_pseudogene	KNOWN	CTSLP2	3	4	-0.057755
chr10	46759019	46786770	46772894	ENSG00000265366.6	-	transcribed_unprocessed_pseudogene	KNOWN	GLUD1P7	3	7	-0.155634
chr10	46774421	46776180	46775300	ENSG00000215097.3	-	processed_pseudogene	KNOWN	DUSP8P3	1	1	-0.219716
chr10	46786674	46811989	46799331	ENSG00000204177.10	+	transcribed_unprocessed_pseudogene	KNOWN	BMS1P1	2	9	-0.007683
chr10	46807458	46807573	46807515	ENSG00000238405.1	-	rRNA	KNOWN	RNA5SP311	1	1	0.023097
chr10	46816516	46832476	46824496	ENSG00000243289.1	+	unprocessed_pseudogene	KNOWN	CTGLF9P	1	4	0.018736
chr10	46870858	46894562	46882710	ENSG00000150175.13	+	unprocessed_pseudogene	KNOWN	FRMPD2B	1	9	-0.147089
chr10	46911396	47002488	46956942	ENSG00000204179.10	+	protein_coding	KNOWN	PTPN20	29	10	-0.438293
chr10	47300386	47313547	47306966	ENSG00000266524.2	+	protein_coding	KNOWN	GDF10	1	3	0.241022
chr10	47322490	47326270	47324380	ENSG00000263761.2	+	protein_coding	KNOWN	GDF2	1	2	0.078445
chr10	47348371	47357875	47353123	ENSG00000265203.1	+	protein_coding	KNOWN	RBP3	1	4	0.508217
chr10	47351740	47351838	47351789	ENSG00000265383.1	-	miRNA	NOVEL	AL731561.1	1	1	0.513234
chr10	47365496	47384273	47374884	ENSG00000265763.3	-	protein_coding	KNOWN	ZNF488	2	3	0.434553
chr10	47460162	47484158	47472160	ENSG00000265190.6	-	protein_coding	KNOWN	ANXA8	8	12	0.516843
chr10	47484457	47484754	47484605	ENSG00000270369.1	-	processed_pseudogene	KNOWN	RP11-144G6.13	1	1	0.612620
chr10	47487219	47491693	47489456	ENSG00000189090.7	-	protein_coding	KNOWN	FAM25G	2	3	0.569583
chr10	47496212	47502195	47499203	ENSG00000224919.1	+	antisense	KNOWN	RP11-144G6.4	1	2	0.498956
chr10	47501854	47523638	47512746	ENSG00000204172.12	-	protein_coding	KNOWN	AGAP9	1	8	0.195317
chr10	47517816	47553514	47535665	ENSG00000254929.6	-	processed_transcript	KNOWN	RP11-144G6.12	2	12	-0.028113
chr10	47532352	47532467	47532409	ENSG00000252877.1	+	rRNA	KNOWN	RNA5SP312	1	1	-0.085165
chr10	47538377	47551954	47545165	ENSG00000251079.6	-	transcribed_unprocessed_pseudogene	KNOWN	BMS1P2	2	9	-0.051218
chr10	47563604	47569697	47566650	ENSG00000265630.2	+	unprocessed_pseudogene	KNOWN	GLUD1P8	1	3	0.150586
chr10	47564256	47566016	47565136	ENSG00000215065.3	+	processed_pseudogene	KNOWN	DUSP8P4	1	1	0.150586
chr10	47581211	47582321	47581766	ENSG00000266217.2	-	unprocessed_pseudogene	KNOWN	CTSLP2	1	3	-0.045512
chr10	47588681	47599830	47594255	ENSG00000264404.2	-	lincRNA	KNOWN	LINC00864	2	3	0.190718
chr10	47689707	47730436	47710071	ENSG00000189014.7	+	unprocessed_pseudogene	KNOWN	FAM35DP	1	8	-0.052775
chr10	47692399	47692727	47692563	ENSG00000276544.1	-	misc_RNA	KNOWN	RN7SL453P	1	1	0.116938
chr10	47706203	47706802	47706502	ENSG00000226964.1	+	processed_pseudogene	KNOWN	RHEBP2	1	1	0.116938
chr10	47750864	47763592	47757228	ENSG00000277758.4	-	protein_coding	KNOWN	ABC7-42404400C24.1	3	8	0.265640
chr10	47908064	47991850	47949957	ENSG00000276850.4	-	lincRNA	KNOWN	CH17-360D5.2	4	3	0.198134
chr10	47918739	47923524	47921131	ENSG00000264717.5	+	lincRNA	KNOWN	CH17-360D5.1	2	3	0.065025
chr10	47970043	47973496	47971769	ENSG00000273760.1	-	lincRNA	KNOWN	CH17-360D5.3	1	2	0.317368
chr10	47995355	47999791	47997573	ENSG00000276430.2	-	protein_coding	KNOWN	FAM25C	1	3	0.289529
chr10	48009873	48031640	48020756	ENSG00000265018.6	-	transcribed_unprocessed_pseudogene	KNOWN	CTGLF12P	2	8	0.409791
chr10	48040462	48040577	48040519	ENSG00000252149.1	+	rRNA	KNOWN	RNA5SP315	1	1	0.070827
chr10	48050282	48060016	48055149	ENSG00000270025.2	-	transcribed_unprocessed_pseudogene	KNOWN	BMS1P7	1	7	0.058825
chr10	48064308	48119455	48091881	ENSG00000278561.1	-	unprocessed_pseudogene	KNOWN	PTPN20CP	1	7	-0.275066
chr10	48155325	48156134	48155729	ENSG00000232462.1	-	sense_intronic	KNOWN	RP11-13E1.5	1	2	-0.056288
chr10	48156558	48274870	48215714	ENSG00000170324.19	-	protein_coding	KNOWN	FRMPD2	11	29	0.047735
chr10	48292699	48293417	48293058	ENSG00000225482.1	+	processed_pseudogene	KNOWN	RP11-542E6.3	1	1	-0.009410
chr10	48306639	48439360	48372999	ENSG00000107643.15	+	protein_coding	KNOWN	MAPK8	16	12	0.034294
chr10	48443836	48445820	48444828	ENSG00000279822.1	-	TEC	KNOWN	RP11-541M12.6	1	1	-0.251661
chr10	48446034	48656265	48551149	ENSG00000128805.14	-	protein_coding	KNOWN	ARHGAP22	15	11	0.280713
chr10	48510525	48511589	48511057	ENSG00000248682.1	-	sense_intronic	KNOWN	ARHGAP22-IT1	1	2	0.504855
chr10	48546472	48546713	48546592	ENSG00000231906.1	-	processed_pseudogene	KNOWN	RP11-541M12.3	1	1	0.188455
chr10	48624004	48625093	48624548	ENSG00000251413.1	-	sense_intronic	KNOWN	RP11-534L6.5	1	2	0.281470
chr10	48664199	48672424	48668311	ENSG00000236800.1	-	lincRNA	KNOWN	RP11-534L6.2	1	2	0.034685
chr10	48684876	48982956	48833916	ENSG00000128815.17	+	protein_coding	KNOWN	WDFY4	7	61	-0.097314
chr10	48745545	48746128	48745836	ENSG00000228754.1	-	processed_pseudogene	KNOWN	RP11-534L6.3	1	1	-0.133775
chr10	48878022	48878649	48878335	ENSG00000228403.1	+	sense_intronic	KNOWN	RP11-563N6.6	1	2	-0.289437
chr10	48883955	48935213	48909584	ENSG00000241577.1	-	sense_overlapping	KNOWN	RP11-523O18.7	1	3	-0.187923
chr10	48909483	48935190	48922336	ENSG00000165383.10	-	protein_coding	KNOWN	LRRC18	2	3	-0.285934
chr10	48976554	48993046	48984800	ENSG00000233665.8	-	processed_transcript	KNOWN	RP11-523O18.5	2	5	-0.018775
chr10	48984564	49018897	49001730	ENSG00000226576.1	+	antisense	KNOWN	RP11-523O18.1	1	2	-0.030195
chr10	48985512	48985587	48985549	ENSG00000264800.1	-	miRNA	KNOWN	MIR4294	1	1	0.004529
chr10	49014245	49115509	49064877	ENSG00000165633.12	-	protein_coding	KNOWN	VSTM4	3	8	-0.104683
chr10	49121839	49151547	49136693	ENSG00000234736.5	+	antisense	KNOWN	FAM170B-AS1	4	6	0.124323
chr10	49131154	49134008	49132581	ENSG00000172538.6	-	protein_coding	KNOWN	FAM170B	1	2	0.145573
chr10	49154725	49188585	49171655	ENSG00000204161.13	-	protein_coding	KNOWN	C10orf128	8	7	-0.048161
chr10	49296112	49299018	49297565	ENSG00000236208.1	-	antisense	KNOWN	C10orf71-AS1	2	2	0.148575
chr10	49299193	49327487	49313340	ENSG00000177354.11	+	protein_coding	KNOWN	C10orf71	2	3	0.180751
chr10	49364181	49396016	49380098	ENSG00000165606.8	-	protein_coding	KNOWN	DRGX	2	7	0.095394
chr10	49419277	49472903	49446090	ENSG00000235939.1	+	antisense	KNOWN	RP11-123B3.2	1	2	-0.033263
chr10	49455368	49539538	49497453	ENSG00000225830.10	-	protein_coding	KNOWN	ERCC6	10	21	0.070074
chr10	49515105	49524227	49519666	ENSG00000243251.5	-	protein_coding	KNOWN	PGBD3	1	2	0.018928
chr10	49515201	49539538	49527369	ENSG00000258838.5	-	protein_coding	KNOWN	ERCC6-PGBD3	2	6	0.077842
chr10	49551308	49552652	49551980	ENSG00000271237.1	+	processed_pseudogene	KNOWN	RP11-140C5.3	1	3	0.133412
chr10	49609095	49665104	49637099	ENSG00000070748.17	+	protein_coding	KNOWN	CHAT	9	16	0.335102
chr10	49610301	49612720	49611510	ENSG00000187714.6	+	protein_coding	KNOWN	SLC18A3	1	1	0.464651
chr10	49679651	49710261	49694956	ENSG00000178645.12	+	protein_coding	KNOWN	C10orf53	4	4	-0.162066
chr10	49734643	49762379	49748511	ENSG00000197444.9	-	protein_coding	KNOWN	OGDHL	6	23	-0.099897
chr10	49771841	49773299	49772570	ENSG00000226389.3	+	processed_pseudogene	KNOWN	RP11-507K13.4	1	2	-0.114459
chr10	49815096	49815562	49815329	ENSG00000229870.1	+	processed_pseudogene	KNOWN	RP11-507K13.6	1	1	-0.369588
chr10	49818279	49970203	49894241	ENSG00000227345.8	-	protein_coding	KNOWN	PARG	7	19	-0.131539
chr10	49909613	49909942	49909777	ENSG00000230166.1	+	processed_pseudogene	KNOWN	RP11-526K21.2	1	1	-0.396627
chr10	49942033	49974850	49958441	ENSG00000204152.10	+	protein_coding	KNOWN	TIMM23B	4	8	-0.051498
chr10	49954214	49954414	49954314	ENSG00000223111.1	+	snoRNA	NOVEL	SNORA74	1	1	-0.102920
chr10	49972763	49982053	49977408	ENSG00000178440.5	+	lincRNA	KNOWN	LINC00843	2	3	0.330504
chr10	49979665	49979780	49979722	ENSG00000222108.1	-	rRNA	KNOWN	RNA5SP317	1	1	0.330504
chr10	49982190	50010499	49996344	ENSG00000204149.9	+	protein_coding	KNOWN	AGAP6	4	10	0.099808
chr10	50021182	50067803	50044492	ENSG00000235618.7	-	transcribed_unprocessed_pseudogene	KNOWN	FAM21EP	2	10	0.165590
chr10	50025135	50027363	50026249	ENSG00000226631.1	-	processed_pseudogene	KNOWN	SLC9A3P3	1	1	0.125159
chr10	50067888	50133506	50100697	ENSG00000099290.15	+	protein_coding	KNOWN	FAM21A	9	31	0.156610
chr10	50150603	50152287	50151445	ENSG00000233011.1	+	processed_pseudogene	KNOWN	SLC9A3P1	1	1	-0.115053
chr10	50182778	50248610	50215694	ENSG00000188611.14	-	protein_coding	KNOWN	ASAH2	6	20	-0.363004
chr10	50264978	50266815	50265896	ENSG00000225137.1	+	processed_pseudogene	KNOWN	DYNC1I2P1	1	1	-0.125239
chr10	50305586	50625163	50465374	ENSG00000198964.13	-	protein_coding	KNOWN	SGMS1	11	11	-0.087908
chr10	50334538	50336123	50335330	ENSG00000279863.1	+	TEC	KNOWN	RP11-521C22.2	1	1	-0.040458
chr10	50472814	50474246	50473530	ENSG00000225303.2	+	antisense	KNOWN	RP11-512N4.2	1	2	-0.082259
chr10	50562231	50562330	50562280	ENSG00000280509.1	-	miRNA	NOVEL	AL117341.1	1	1	-0.023485
chr10	50590652	50590712	50590682	ENSG00000238523.1	-	snRNA	KNOWN	RNU7-107P	1	1	-0.102737
chr10	50624951	50641451	50633201	ENSG00000226200.6	+	antisense	KNOWN	SGMS1-AS1	2	4	0.046148
chr10	50629532	50631075	50630303	ENSG00000231588.1	-	processed_pseudogene	KNOWN	RP11-50E11.2	1	1	0.044960
chr10	50655967	50660472	50658219	ENSG00000231345.3	+	transcribed_processed_pseudogene	KNOWN	BEND3P1	2	2	0.126343
chr10	50676743	50686326	50681534	ENSG00000232706.3	+	unprocessed_pseudogene	KNOWN	NUTM2HP	1	8	0.133812
chr10	50695592	50695981	50695786	ENSG00000226168.1	+	processed_pseudogene	KNOWN	RP11-564C4.4	1	1	0.517661
chr10	50705380	50708906	50707143	ENSG00000230011.2	-	unprocessed_pseudogene	KNOWN	CTSLP4	1	7	0.517661
chr10	50726947	50727969	50727458	ENSG00000213667.3	-	processed_pseudogene	KNOWN	PGGT1BP1	1	1	-0.236430
chr10	50739318	50816495	50777906	ENSG00000204147.9	+	protein_coding	KNOWN	ASAH2B	3	7	-0.235681
chr10	50799409	50885675	50842542	ENSG00000148584.14	-	protein_coding	KNOWN	A1CF	10	15	-0.411879
chr10	50822692	50824525	50823608	ENSG00000229711.1	-	sense_intronic	KNOWN	RP11-449O16.2	1	4	-0.201454
chr10	50962993	50963358	50963175	ENSG00000236944.1	-	processed_pseudogene	KNOWN	CCDC58P2	1	1	-0.269408
chr10	50964270	50965220	50964745	ENSG00000261368.1	+	lincRNA	KNOWN	RP11-96B5.4	1	1	-0.269408
chr10	50991358	52298350	51644854	ENSG00000185532.15	+	protein_coding	KNOWN	PRKG1	5	18	-0.305302
chr10	51062579	51068553	51065566	ENSG00000223502.1	-	antisense	KNOWN	RP11-96B5.3	1	2	-0.085651
chr10	51244894	51245806	51245350	ENSG00000231132.1	-	antisense	KNOWN	RP11-40C11.2	1	3	-0.124045
chr10	51265325	51265452	51265388	ENSG00000266591.1	+	miRNA	NOVEL	AC022537.1	1	1	-0.079195
chr10	51299573	51299655	51299614	ENSG00000207813.1	+	miRNA	KNOWN	MIR605	1	1	-0.065549
chr10	51302566	51306709	51304637	ENSG00000235279.1	+	sense_intronic	KNOWN	RP11-539E19.2	1	2	-0.065549
chr10	51319826	51320660	51320243	ENSG00000213659.4	+	processed_pseudogene	KNOWN	RSU1P3	1	1	-0.263273
chr10	51526341	51526433	51526387	ENSG00000278260.1	+	miRNA	NOVEL	AL157399.1	1	1	-0.110995
chr10	51639743	51639832	51639787	ENSG00000216022.1	-	miRNA	NOVEL	AC068062.1	1	1	-0.227698
chr10	51695487	51699591	51697539	ENSG00000177613.8	-	protein_coding	KNOWN	CSTF2T	1	1	-0.370351
chr10	52230742	52314128	52272435	ENSG00000236671.7	-	antisense	KNOWN	PRKG1-AS1	3	6	-0.325806
chr10	52314296	52318042	52316169	ENSG00000107984.9	+	protein_coding	KNOWN	DKK1	4	4	0.276416
chr10	52389112	52389488	52389300	ENSG00000213657.3	-	processed_pseudogene	KNOWN	RP11-346D6.4	1	1	-0.062894
chr10	52411135	52413492	52412313	ENSG00000227972.1	+	processed_pseudogene	KNOWN	PRKRIRP3	1	2	-0.166470
chr10	52450874	52470533	52460703	ENSG00000231131.6	-	lincRNA	KNOWN	LINC01468	2	4	0.027973
chr10	52556702	52755409	52656055	ENSG00000228651.1	-	antisense	KNOWN	RP11-556E13.1	2	3	-0.222939
chr10	52765380	52771700	52768540	ENSG00000165471.6	-	protein_coding	KNOWN	MBL2	1	4	-0.084922
chr10	52852607	52852703	52852655	ENSG00000201196.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.133075
chr10	52973488	52975815	52974651	ENSG00000227121.1	-	lincRNA	KNOWN	RP11-319F12.2	1	3	-0.505249
chr10	53038285	53038544	53038414	ENSG00000231399.1	+	processed_pseudogene	KNOWN	SNRPEP8	1	1	-0.255174
chr10	53291072	53311065	53301068	ENSG00000226296.1	-	lincRNA	KNOWN	RP11-71J2.1	1	2	-0.664283
chr10	53458197	53458288	53458242	ENSG00000252161.1	+	rRNA	KNOWN	RNA5SP318	1	1	-0.365215
chr10	53766400	53766614	53766507	ENSG00000233805.1	+	processed_pseudogene	KNOWN	RP11-449J3.3	1	1	-0.830472
chr10	53802771	55627942	54715356	ENSG00000150275.17	-	protein_coding	KNOWN	PCDH15	34	37	-0.678919
chr10	54347963	54348014	54347988	ENSG00000263921.1	-	miRNA	NOVEL	AC013737.1	1	1	-0.757674
chr10	54452423	54452511	54452467	ENSG00000252252.1	-	snRNA	KNOWN	RNU6-687P	1	1	-0.616545
chr10	54486230	54656051	54571140	ENSG00000234173.1	+	antisense	KNOWN	RP11-257I14.1	1	6	-0.633430
chr10	54599678	54600683	54600180	ENSG00000224697.1	+	processed_pseudogene	KNOWN	NEFMP1	1	1	-0.560085
chr10	54607874	54607957	54607915	ENSG00000221594.1	-	miRNA	KNOWN	MIR548F1	1	1	-0.560085
chr10	54864674	54869122	54866898	ENSG00000236958.1	-	sense_intronic	KNOWN	RP11-264A11.1	1	2	-0.164348
chr10	55247755	55597233	55422494	ENSG00000236744.2	-	sense_intronic	KNOWN	RP11-168O22.1	1	4	-0.690575
chr10	55468327	55469222	55468774	ENSG00000223800.1	+	lincRNA	KNOWN	RP11-598C10.2	1	2	-0.936577
chr10	55506219	55513217	55509718	ENSG00000228048.1	+	lincRNA	KNOWN	RP11-598C10.1	1	2	-0.641801
chr10	55599303	55600041	55599672	ENSG00000249860.3	+	protein_coding	KNOWN	MTRNR2L5	1	1	-0.808473
chr10	55667341	55668350	55667845	ENSG00000236993.2	-	processed_pseudogene	KNOWN	GAPDHP21	1	1	-1.028302
chr10	55746551	55746908	55746729	ENSG00000270541.1	+	processed_pseudogene	KNOWN	RP11-478B11.2	1	1	-0.710562
chr10	56357228	56361275	56359251	ENSG00000122952.16	-	protein_coding	KNOWN	ZWINT	9	9	-0.613825
chr10	56595963	56596031	56595997	ENSG00000238707.1	-	snoRNA	NOVEL	SNORD2	1	1	-0.853852
chr10	57095699	57095781	57095740	ENSG00000276818.1	+	miRNA	NOVEL	AC026393.1	1	1	-0.630899
chr10	57304479	57304559	57304519	ENSG00000264747.1	-	miRNA	KNOWN	MIR3924	1	1	-1.024926
chr10	57513157	57513425	57513291	ENSG00000235810.1	+	processed_pseudogene	KNOWN	RP11-550A9.1	1	1	-0.463398
chr10	57955295	57957178	57956236	ENSG00000223841.1	+	processed_pseudogene	KNOWN	RP11-448K10.1	1	1	-0.316093
chr10	57982285	57982993	57982639	ENSG00000270192.1	+	processed_pseudogene	KNOWN	MRPS35P3	1	1	-0.262541
chr10	58106423	58106879	58106651	ENSG00000232115.1	-	processed_pseudogene	KNOWN	RP11-123G9.1	1	1	-0.284157
chr10	58191517	58267934	58229725	ENSG00000151151.5	-	protein_coding	KNOWN	IPMK	1	6	-0.216929
chr10	58212541	58213036	58212788	ENSG00000180221.6	-	processed_pseudogene	KNOWN	TPT1P10	1	1	0.082890
chr10	58269058	58289586	58279322	ENSG00000122873.11	+	protein_coding	KNOWN	CISD1	4	5	-0.301307
chr10	58304553	58305621	58305087	ENSG00000228527.1	+	lincRNA	KNOWN	RP11-179B15.5	1	2	-0.003586
chr10	58325614	58327030	58326322	ENSG00000261076.1	-	lincRNA	KNOWN	RP11-179B15.6	1	1	-0.308249
chr10	58334975	58370753	58352864	ENSG00000072401.14	+	protein_coding	KNOWN	UBE2D1	4	7	-0.150303
chr10	58385022	58399221	58392121	ENSG00000108064.10	+	protein_coding	KNOWN	TFAM	4	8	-0.436946
chr10	58513140	58831437	58672288	ENSG00000122870.11	+	protein_coding	KNOWN	BICC1	3	21	-0.114234
chr10	58694927	58695005	58694966	ENSG00000281826.1	-	miRNA	NOVEL	AC012168.1	1	1	-0.084558
chr10	58715554	58716257	58715905	ENSG00000183055.5	+	processed_pseudogene	KNOWN	FAM133CP	1	1	0.004529
chr10	58869184	58869528	58869356	ENSG00000252076.1	+	misc_RNA	KNOWN	RN7SKP196	1	1	-0.301545
chr10	58999626	59001543	59000584	ENSG00000237949.1	+	lincRNA	KNOWN	LINC00844	1	2	-0.155446
chr10	59088701	59089039	59088870	ENSG00000226888.2	-	processed_pseudogene	KNOWN	RP11-561G1.3	1	1	-0.520526
chr10	59136625	59138182	59137403	ENSG00000226557.1	-	processed_pseudogene	KNOWN	TRAF6P1	1	1	-0.671941
chr10	59176590	59247774	59212182	ENSG00000165443.11	+	protein_coding	KNOWN	PHYHIPL	4	6	-0.383174
chr10	59246129	59363181	59304655	ENSG00000148541.12	-	protein_coding	KNOWN	FAM13C	20	15	-0.497798
chr10	59282147	59282835	59282491	ENSG00000236556.1	+	antisense	KNOWN	RP11-443O13.3	1	2	-0.486368
chr10	59340779	59340862	59340820	ENSG00000280779.1	-	miRNA	NOVEL	AC025038.1	1	1	-0.583281
chr10	59551404	59551878	59551641	ENSG00000235469.1	-	processed_pseudogene	KNOWN	MRPL50P4	1	1	-0.684570
chr10	59589150	59611248	59600199	ENSG00000235140.1	+	lincRNA	KNOWN	RP11-135D11.2	1	4	-0.191298
chr10	59650761	59736002	59693381	ENSG00000165449.11	-	protein_coding	KNOWN	SLC16A9	3	6	-0.343382
chr10	59736692	59756041	59746366	ENSG00000227877.6	-	protein_coding	KNOWN	MRLN	11	4	-0.342003
chr10	59788763	59906656	59847709	ENSG00000108091.10	-	protein_coding	KNOWN	CCDC6	3	9	-0.153196
chr10	59955430	59960913	59958171	ENSG00000235931.2	-	lincRNA	KNOWN	LINC01553	3	3	-0.340235
chr10	60026298	60733490	60379894	ENSG00000151150.20	-	protein_coding	KNOWN	ANK3	33	44	-0.419449
chr10	60050668	60060743	60055705	ENSG00000232682.2	+	antisense	KNOWN	RP11-388P9.2	2	2	-1.018755
chr10	60081741	60081854	60081797	ENSG00000202190.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.150579
chr10	60139912	60140877	60140394	ENSG00000282121.1	+	antisense	KNOWN	RP11-388P9.3	1	2	-0.212863
chr10	60684505	60685209	60684857	ENSG00000122872.8	+	processed_pseudogene	KNOWN	ARL4AP1	1	1	-0.433793
chr10	60734342	60741828	60738085	ENSG00000254271.1	+	lincRNA	KNOWN	RP11-131N11.4	1	2	-0.492971
chr10	60778331	60794852	60786591	ENSG00000170312.15	+	protein_coding	KNOWN	CDK1	9	9	-0.465260
chr10	60869438	61001440	60935439	ENSG00000072422.16	-	protein_coding	KNOWN	RHOBTB1	6	12	-0.081388
chr10	60912765	60912927	60912846	ENSG00000223107.1	-	snRNA	KNOWN	RNU2-72P	1	1	0.002724
chr10	61016275	61026420	61021347	ENSG00000227244.2	+	lincRNA	KNOWN	LINC00845	1	2	-0.172655
chr10	61406643	61453450	61430046	ENSG00000196932.11	-	protein_coding	KNOWN	TMEM26	5	7	-0.640695
chr10	61452639	61481956	61467297	ENSG00000237233.2	+	antisense	KNOWN	TMEM26-AS1	1	3	-0.064759
chr10	61662961	61766766	61714863	ENSG00000183346.6	+	protein_coding	KNOWN	C10orf107	2	7	-0.403211
chr10	61684892	61685388	61685140	ENSG00000272592.1	-	antisense	KNOWN	RP11-63A2.2	1	1	-0.502752
chr10	61781745	61821246	61801495	ENSG00000233643.2	-	lincRNA	KNOWN	RP11-491H19.1	1	5	0.037617
chr10	61901300	62096944	61999122	ENSG00000150347.14	+	protein_coding	KNOWN	ARID5B	2	10	-0.011675
chr10	61926936	61927018	61926977	ENSG00000221272.2	-	miRNA	NOVEL	AC067742.1	1	1	-0.054229
chr10	62116215	62116301	62116258	ENSG00000221094.1	+	miRNA	NOVEL	AL671972.1	1	1	0.266826
chr10	62183035	62268707	62225871	ENSG00000182010.10	-	protein_coding	KNOWN	RTKN2	3	12	-0.183951
chr10	62289521	62304033	62296777	ENSG00000234756.1	+	lincRNA	KNOWN	RP11-120C12.3	1	3	-0.362674
chr10	62350006	62350297	62350151	ENSG00000240940.3	+	misc_RNA	KNOWN	RN7SL591P	1	1	0.100259
chr10	62374192	62672011	62523101	ENSG00000138311.15	+	protein_coding	KNOWN	ZNF365	11	8	-0.052537
chr10	62741208	62741385	62741296	ENSG00000234489.1	-	processed_pseudogene	KNOWN	ALDH7A1P4	1	1	-0.100653
chr10	62793562	62805887	62799724	ENSG00000238280.1	-	antisense	KNOWN	RP11-436D10.3	1	3	-0.224482
chr10	62804857	62808483	62806670	ENSG00000181915.4	+	protein_coding	KNOWN	ADO	1	1	-0.224482
chr10	62811996	62919900	62865948	ENSG00000122877.13	-	protein_coding	KNOWN	EGR2	4	8	-0.108646
chr10	63110139	63110246	63110192	ENSG00000199446.1	+	snRNA	KNOWN	RNU6-543P	1	1	-0.093422
chr10	63123938	63125537	63124737	ENSG00000224301.1	-	antisense	KNOWN	RP11-144G16.1	1	3	-0.093422
chr10	63133247	63155031	63144139	ENSG00000148572.14	+	protein_coding	KNOWN	NRBF2	3	7	0.166944
chr10	63167221	63521850	63344535	ENSG00000171988.17	-	protein_coding	KNOWN	JMJD1C	11	26	-0.106703
chr10	63222155	63223045	63222600	ENSG00000234369.1	+	processed_pseudogene	KNOWN	TATDN1P1	1	1	-0.326152
chr10	63358745	63359104	63358924	ENSG00000270421.1	+	processed_pseudogene	KNOWN	RP11-351O1.4	1	1	-0.074658
chr10	63372942	63373053	63372997	ENSG00000221063.2	-	miRNA	KNOWN	MIR1296	1	1	-0.239990
chr10	63427297	63427939	63427618	ENSG00000235816.3	+	processed_pseudogene	KNOWN	PRELID1P3	1	1	-0.071507
chr10	63465229	63466563	63465896	ENSG00000272767.1	+	antisense	KNOWN	JMJD1C-AS1	1	1	-0.177398
chr10	63489461	63489638	63489549	ENSG00000224412.1	+	processed_pseudogene	KNOWN	RP11-351O1.3	1	1	-0.244604
chr10	63521363	63625123	63573243	ENSG00000165476.13	+	protein_coding	KNOWN	REEP3	2	8	-0.134092
chr10	63634317	63634827	63634572	ENSG00000232075.1	-	processed_pseudogene	KNOWN	MRPL35P2	1	1	0.002355
chr10	63658074	63658521	63658297	ENSG00000270352.1	+	processed_pseudogene	KNOWN	RP11-111N20.4	1	1	-0.032763
chr10	63664664	63990568	63827616	ENSG00000228566.1	+	lincRNA	KNOWN	RP11-170M17.1	1	3	-0.203392
chr10	63902451	63903245	63902848	ENSG00000213609.3	-	processed_pseudogene	KNOWN	RP11-170M17.2	1	1	-0.133301
chr10	64036345	64037280	64036812	ENSG00000226426.1	-	lincRNA	KNOWN	RP11-174J11.1	1	2	-0.339561
chr10	64168959	64170850	64169904	ENSG00000235489.4	-	processed_pseudogene	KNOWN	DBF4P1	1	1	-0.644886
chr10	64620374	64620922	64620648	ENSG00000233900.1	-	processed_pseudogene	KNOWN	RPL17P35	1	1	-0.805758
chr10	64762883	64763172	64763027	ENSG00000270648.1	-	processed_pseudogene	KNOWN	CYP2C61P	1	1	-0.633501
chr10	64825572	64826579	64826075	ENSG00000216740.2	+	processed_pseudogene	KNOWN	ANXA2P3	1	1	-0.374093
chr10	64901136	64924518	64912827	ENSG00000224714.2	-	lincRNA	KNOWN	RP11-179K3.2	1	2	-0.401018
chr10	65054460	65055003	65054731	ENSG00000270754.1	+	processed_pseudogene	KNOWN	NEK4P3	1	1	-0.608448
chr10	65123667	65141185	65132426	ENSG00000282906.1	+	lincRNA	KNOWN	RP11-252C24.3	2	3	-0.673479
chr10	65169438	65169869	65169653	ENSG00000227173.1	-	processed_pseudogene	KNOWN	MYL6P3	1	1	-0.696504
chr10	65248032	65248792	65248412	ENSG00000233724.1	-	processed_pseudogene	KNOWN	RP11-252C24.2	1	1	-0.562680
chr10	65313785	65314970	65314377	ENSG00000235356.1	+	lincRNA	KNOWN	RP11-428G2.1	1	3	-0.987932
chr10	65324367	65324455	65324411	ENSG00000222197.2	+	miRNA	NOVEL	AL592466.1	1	1	-0.987932
chr10	65570338	65768835	65669586	ENSG00000228065.10	+	lincRNA	KNOWN	LINC01515	20	7	-0.767075
chr10	65710060	65710144	65710102	ENSG00000253012.1	+	miRNA	NOVEL	AC022538.1	1	1	-0.592912
chr10	65912518	67696169	66804343	ENSG00000183230.16	-	protein_coding	KNOWN	CTNNA3	5	18	-0.581267
chr10	66079243	66118326	66098784	ENSG00000273360.1	+	antisense	KNOWN	RP11-210G22.1	1	5	-0.633667
chr10	66497277	66497380	66497328	ENSG00000274065.1	-	miRNA	NOVEL	AC016819.1	1	1	-0.624836
chr10	66837457	66837704	66837580	ENSG00000277056.1	+	unprocessed_pseudogene	KNOWN	RP11-65E10.1	1	1	-0.263489
chr10	66926006	67099830	67012918	ENSG00000198739.10	+	protein_coding	KNOWN	LRRTM3	3	3	-0.586492
chr10	67052609	67055028	67053818	ENSG00000225299.1	+	antisense	KNOWN	RP11-344A5.1	1	2	-0.623555
chr10	67334123	67334882	67334502	ENSG00000226448.1	+	processed_pseudogene	KNOWN	RP11-93L14.1	1	1	-0.549873
chr10	67403351	67403410	67403380	ENSG00000276866.1	-	miRNA	KNOWN	MIR7151	1	1	-0.376778
chr10	67750284	67751225	67750754	ENSG00000213606.3	+	processed_pseudogene	KNOWN	AKR1B10P1	1	1	-0.251963
chr10	67793770	67794245	67794007	ENSG00000225922.1	+	processed_pseudogene	KNOWN	RP11-57G10.1	1	1	0.130724
chr10	67796665	67838166	67817415	ENSG00000108176.14	-	protein_coding	KNOWN	DNAJC12	5	6	0.027225
chr10	67808502	67808608	67808555	ENSG00000212520.1	+	snRNA	KNOWN	RNU6-1250P	1	1	0.130724
chr10	67825310	67825600	67825455	ENSG00000239942.2	-	misc_RNA	KNOWN	RN7SL394P	1	1	0.063233
chr10	67833763	67834081	67833922	ENSG00000237141.1	+	processed_pseudogene	KNOWN	DNAJC19P1	1	1	-0.229936
chr10	67849525	67850746	67850135	ENSG00000272892.1	+	lincRNA	KNOWN	RP11-57G10.8	1	1	0.078656
chr10	67858818	67858871	67858844	ENSG00000252113.2	-	snRNA	KNOWN	RNU6-523P	1	1	0.274470
chr10	67874332	67874911	67874621	ENSG00000219932.6	+	processed_pseudogene	KNOWN	RPL12P8	1	1	0.180528
chr10	67884669	67918390	67901529	ENSG00000096717.11	+	protein_coding	KNOWN	SIRT1	6	9	-0.015237
chr10	67921899	68075348	67998623	ENSG00000148634.15	-	protein_coding	KNOWN	HERC4	15	26	-0.011306
chr10	67960702	67961464	67961083	ENSG00000226318.1	-	processed_pseudogene	KNOWN	RP11-474D14.2	1	1	-0.004516
chr10	68007718	68008017	68007867	ENSG00000266467.2	-	misc_RNA	KNOWN	RN7SL220P	1	1	-0.171043
chr10	68010205	68010862	68010533	ENSG00000236375.3	-	processed_pseudogene	KNOWN	POU5F1P5	1	1	0.277103
chr10	68106117	68212017	68159067	ENSG00000138347.15	+	protein_coding	KNOWN	MYPN	5	24	0.072180
chr10	68158079	68158408	68158243	ENSG00000222371.1	+	misc_RNA	KNOWN	RN7SKP202	1	1	0.189839
chr10	68230624	68232103	68231363	ENSG00000179774.8	-	protein_coding	KNOWN	ATOH7	1	1	-0.046985
chr10	68233251	68242379	68237815	ENSG00000233590.1	-	lincRNA	KNOWN	RP11-153K11.3	2	3	-0.046985
chr10	68260557	68261499	68261028	ENSG00000234102.1	+	processed_pseudogene	KNOWN	KRT19P4	1	1	-0.060817
chr10	68282660	68333049	68307854	ENSG00000108187.15	-	protein_coding	KNOWN	PBLD	7	10	0.167722
chr10	68331174	68343191	68337182	ENSG00000096746.17	+	protein_coding	KNOWN	HNRNPH3	11	10	-0.100653
chr10	68341107	68407294	68374200	ENSG00000204130.12	-	protein_coding	KNOWN	RUFY2	13	19	-0.005422
chr10	68414064	68472121	68443092	ENSG00000138346.14	-	protein_coding	KNOWN	DNA2	8	22	0.167500
chr10	68424560	68424997	68424778	ENSG00000234806.1	+	processed_pseudogene	KNOWN	RP11-9E13.4	1	1	0.337104
chr10	68461407	68461525	68461466	ENSG00000199638.1	+	rRNA	KNOWN	RNA5SP319	1	1	-0.013618
chr10	68477999	68527474	68502736	ENSG00000122912.14	-	protein_coding	KNOWN	SLC25A16	7	10	0.334432
chr10	68499532	68499968	68499750	ENSG00000226493.1	+	processed_pseudogene	KNOWN	RP11-524O24.2	1	1	0.169068
chr10	68503152	68503259	68503205	ENSG00000207438.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.169068
chr10	68544489	68544833	68544661	ENSG00000214881.4	-	processed_pseudogene	KNOWN	TMEM14DP	1	1	0.509498
chr10	68560656	68694482	68627569	ENSG00000138336.8	+	protein_coding	KNOWN	TET1	1	12	0.360556
chr10	68632371	68632727	68632549	ENSG00000213025.2	+	processed_pseudogene	KNOWN	COX20P1	1	1	0.450446
chr10	68674356	68675100	68674728	ENSG00000227583.1	+	processed_pseudogene	KNOWN	RP11-119F7.3	1	1	0.110254
chr10	68698500	68700794	68699647	ENSG00000260400.1	+	sense_overlapping	KNOWN	RP11-119F7.5	1	1	-0.062731
chr10	68717311	68717795	68717553	ENSG00000270494.1	-	processed_pseudogene	KNOWN	RP11-119F7.6	1	2	0.282095
chr10	68721012	68792377	68756694	ENSG00000060339.13	+	protein_coding	KNOWN	CCAR1	18	25	0.182462
chr10	68735720	68735823	68735771	ENSG00000195401.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.257051
chr10	68759318	68759414	68759366	ENSG00000221184.1	+	miRNA	KNOWN	MIR1254-1	1	1	0.039204
chr10	68827541	68895432	68861486	ENSG00000165730.14	+	protein_coding	KNOWN	STOX1	4	5	0.379544
chr10	68846805	68846911	68846858	ENSG00000200218.1	+	snRNA	KNOWN	RNU6-697P	1	1	0.486851
chr10	68901278	68946847	68924062	ENSG00000107625.12	+	protein_coding	KNOWN	DDX50	6	23	0.098712
chr10	68911653	68911759	68911706	ENSG00000206855.1	-	snRNA	KNOWN	RNU6-571P	1	1	0.134220
chr10	68956128	68985073	68970600	ENSG00000165732.12	+	protein_coding	KNOWN	DDX21	2	15	0.324157
chr10	68988721	69016982	69002851	ENSG00000198954.6	+	protein_coding	KNOWN	KIF1BP	5	7	0.202736
chr10	68991137	68991707	68991422	ENSG00000214875.2	+	processed_pseudogene	KNOWN	MED28P1	1	1	0.209485
chr10	69022778	69023866	69023322	ENSG00000229001.1	+	processed_pseudogene	KNOWN	ACTBP14	1	1	0.141179
chr10	69088106	69104811	69096458	ENSG00000122862.4	+	protein_coding	KNOWN	SRGN	2	3	0.233322
chr10	69098496	69098794	69098645	ENSG00000274008.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.199520
chr10	69123512	69172861	69148186	ENSG00000122958.14	+	protein_coding	KNOWN	VPS26A	9	10	0.080686
chr10	69161530	69161906	69161718	ENSG00000233163.1	-	processed_pseudogene	KNOWN	RP11-259F16.3	1	1	-0.008809
chr10	69180232	69209099	69194665	ENSG00000156502.13	+	protein_coding	KNOWN	SUPV3L1	7	15	0.221848
chr10	69215333	69232490	69223911	ENSG00000229261.1	-	antisense	KNOWN	RP11-227H15.4	1	5	0.147909
chr10	69220303	69267559	69243931	ENSG00000156510.12	+	protein_coding	KNOWN	HKDC1	3	18	0.362603
chr10	69265342	69268148	69266745	ENSG00000231748.1	-	antisense	KNOWN	RP11-227H15.5	1	2	0.428683
chr10	69269984	69401882	69335933	ENSG00000156515.21	+	protein_coding	KNOWN	HK1	17	22	0.408880
chr10	69300432	69300817	69300624	ENSG00000229197.1	-	processed_pseudogene	KNOWN	RP11-227H15.7	1	1	0.300745
chr10	69363555	69363641	69363598	ENSG00000221774.1	-	miRNA	NOVEL	AC016821.1	1	1	0.389152
chr10	69403903	69416867	69410385	ENSG00000075073.14	-	protein_coding	KNOWN	TACR2	3	6	0.560995
chr10	69432972	69433371	69433171	ENSG00000232734.1	-	processed_pseudogene	KNOWN	ATP5G1P7	1	1	0.402332
chr10	69451473	69507669	69479571	ENSG00000099282.9	+	protein_coding	KNOWN	TSPAN15	8	8	0.438852
chr10	69458672	69458738	69458705	ENSG00000273530.1	+	miRNA	NOVEL	AC016821.2	1	1	0.283612
chr10	69523311	69523650	69523480	ENSG00000233197.1	-	processed_pseudogene	KNOWN	TMEM256P1	1	1	0.437127
chr10	69571698	69573238	69572468	ENSG00000122859.4	-	protein_coding	KNOWN	NEUROG3	1	2	0.237533
chr10	69575807	69577154	69576480	ENSG00000236154.1	+	antisense	KNOWN	RP11-343J3.2	1	2	0.237533
chr10	69589880	69590355	69590117	ENSG00000230755.1	-	processed_pseudogene	KNOWN	RP11-343J3.7	1	1	0.134042
chr10	69590583	69591262	69590922	ENSG00000235803.1	-	processed_pseudogene	KNOWN	RP11-343J3.6	1	1	0.099448
chr10	69591406	69592931	69592168	ENSG00000235524.1	-	processed_pseudogene	KNOWN	MTCO1P23	1	1	0.099448
chr10	69594041	69594932	69594486	ENSG00000231152.1	-	processed_pseudogene	KNOWN	MTND2P15	1	1	0.099448
chr10	69595487	69596436	69595961	ENSG00000226794.1	-	processed_pseudogene	KNOWN	MTND1P20	1	1	0.099448
chr10	69630251	69633599	69631925	ENSG00000171224.8	+	protein_coding	KNOWN	C10orf35	3	4	0.160887
chr10	69684899	69692452	69688675	ENSG00000235645.2	+	lincRNA	KNOWN	RP11-242G20.1	1	4	0.165614
chr10	69778962	69779838	69779400	ENSG00000230469.1	+	processed_pseudogene	KNOWN	RPL5P26	1	1	0.240272
chr10	69801931	69964275	69883103	ENSG00000197467.13	+	protein_coding	KNOWN	COL13A1	14	41	0.549912
chr10	69859214	69859299	69859256	ENSG00000266082.1	-	miRNA	NOVEL	AL138925.1	1	1	0.674037
chr10	69994626	70007836	70001231	ENSG00000224222.1	-	lincRNA	KNOWN	RP11-262I2.2	1	3	-0.299838
chr10	70052796	70112280	70082538	ENSG00000099284.13	+	protein_coding	KNOWN	H2AFY2	2	9	0.119877
chr10	70098223	70132934	70115578	ENSG00000042286.14	-	protein_coding	KNOWN	AIFM2	4	9	0.483285
chr10	70137981	70146676	70142328	ENSG00000156521.13	-	protein_coding	KNOWN	TYSND1	4	4	0.598099
chr10	70147289	70170523	70158906	ENSG00000079332.14	-	protein_coding	KNOWN	SAR1A	8	8	0.339431
chr10	70163685	70164124	70163904	ENSG00000229097.1	+	processed_pseudogene	KNOWN	CALM2P2	1	1	0.312118
chr10	70198988	70199239	70199113	ENSG00000232142.1	-	processed_pseudogene	KNOWN	RP11-367H5.8	1	1	0.158761
chr10	70202830	70233911	70218370	ENSG00000180817.11	-	protein_coding	KNOWN	PPA1	6	11	0.076863
chr10	70247329	70283676	70265502	ENSG00000148734.7	-	protein_coding	KNOWN	NPFFR1	1	4	0.284483
chr10	70298970	70382650	70340810	ENSG00000172731.13	-	protein_coding	KNOWN	LRRC20	7	5	0.416782
chr10	70389426	70390626	70390026	ENSG00000224725.3	+	processed_pseudogene	KNOWN	CEP57L1P1	1	1	0.416680
chr10	70404379	70428618	70416498	ENSG00000148730.6	+	protein_coding	KNOWN	EIF4EBP2	1	3	0.431207
chr10	70432315	70447951	70440133	ENSG00000156574.9	-	protein_coding	KNOWN	NODAL	2	3	0.331745
chr10	70434829	70436556	70435692	ENSG00000280401.1	+	TEC	KNOWN	RP11-104F15.9	1	1	0.331745
chr10	70478821	70568449	70523635	ENSG00000107719.8	+	protein_coding	KNOWN	PALD1	1	20	0.423426
chr10	70485336	70486325	70485830	ENSG00000230661.1	-	processed_pseudogene	KNOWN	YY1P1	1	2	0.470503
chr10	70597348	70602775	70600061	ENSG00000180644.6	-	protein_coding	KNOWN	PRF1	2	3	0.106276
chr10	70672803	70762441	70717622	ENSG00000138316.10	+	protein_coding	KNOWN	ADAMTS14	2	22	0.472014
chr10	70771239	70785401	70778320	ENSG00000166220.12	-	protein_coding	KNOWN	TBATA	3	11	0.431842
chr10	70794230	70794523	70794376	ENSG00000231366.1	-	processed_pseudogene	KNOWN	RP11-399N22.3	1	1	0.114832
chr10	70815961	70881173	70848567	ENSG00000166224.16	+	protein_coding	KNOWN	SGPL1	8	15	-0.035768
chr10	70882280	70888784	70885532	ENSG00000166228.8	-	protein_coding	KNOWN	PCBD1	3	4	-0.203784
chr10	70929925	70932057	70930991	ENSG00000271409.1	+	lincRNA	KNOWN	RP11-432J9.3	1	2	0.301243
chr10	70939053	70955641	70947347	ENSG00000259267.2	+	lincRNA	KNOWN	RP11-432J9.6	2	3	0.356789
chr10	71212570	71302864	71257717	ENSG00000107731.12	+	protein_coding	KNOWN	UNC5B	2	17	0.678195
chr10	71217224	71218228	71217726	ENSG00000237512.6	-	antisense	KNOWN	UNC5B-AS1	2	2	0.500574
chr10	71319258	71363385	71341321	ENSG00000198246.7	+	protein_coding	KNOWN	SLC29A3	3	6	0.402292
chr10	71364243	71366374	71365308	ENSG00000279406.1	+	TEC	KNOWN	RP11-327E2.5	1	1	0.373763
chr10	71396934	71815947	71606440	ENSG00000107736.19	+	protein_coding	KNOWN	CDH23	14	70	0.465600
chr10	71508153	71511873	71510013	ENSG00000223817.1	-	antisense	KNOWN	CDH23-AS1	1	3	0.170733
chr10	71711701	71737824	71724762	ENSG00000214688.4	-	protein_coding	KNOWN	C10orf105	2	2	0.633041
chr10	71747559	71773498	71760528	ENSG00000107738.19	-	protein_coding	KNOWN	C10orf54	3	7	0.799300
chr10	71790747	71790800	71790773	ENSG00000274824.1	+	miRNA	KNOWN	MIR7152	1	1	0.731697
chr10	71816298	71851375	71833836	ENSG00000197746.13	-	protein_coding	KNOWN	PSAP	6	14	0.545064
chr10	71844735	71844794	71844764	ENSG00000238446.1	-	snRNA	KNOWN	RNU7-38P	1	1	0.475320
chr10	71878356	71879107	71878731	ENSG00000230526.1	+	lincRNA	KNOWN	RP11-472G21.2	1	2	0.748037
chr10	71894311	71894411	71894361	ENSG00000278651.1	-	miRNA	NOVEL	AC073370.1	1	1	0.516797
chr10	71964365	72013564	71988964	ENSG00000122863.5	+	protein_coding	KNOWN	CHST3	1	3	0.723858
chr10	72053294	72054037	72053665	ENSG00000272988.1	-	lincRNA	KNOWN	RP11-150D20.5	1	1	0.871150
chr10	72059035	72089032	72074033	ENSG00000107742.12	-	protein_coding	KNOWN	SPOCK2	9	12	0.659460
chr10	72096032	72217134	72156583	ENSG00000138303.17	-	protein_coding	KNOWN	ASCC1	19	13	0.320716
chr10	72180858	72180989	72180923	ENSG00000200294.1	+	snoRNA	NOVEL	SNORA36	1	1	0.357886
chr10	72189941	72190576	72190258	ENSG00000226701.1	+	processed_pseudogene	KNOWN	RP11-570G20.1	1	1	0.212831
chr10	72216000	72235860	72225930	ENSG00000166295.8	+	protein_coding	KNOWN	ANAPC16	5	5	0.487704
chr10	72220752	72220852	72220802	ENSG00000200170.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.422744
chr10	72273920	72276036	72274978	ENSG00000168209.4	+	protein_coding	KNOWN	DDIT4	3	3	1.009530
chr10	72274915	72275980	72275447	ENSG00000269926.1	-	antisense	KNOWN	RP11-442H21.2	1	2	1.009530
chr10	72332830	72355230	72344030	ENSG00000148719.14	-	protein_coding	KNOWN	DNAJB12	6	9	0.767423
chr10	72367327	72626191	72496759	ENSG00000107745.17	-	protein_coding	KNOWN	MICU1	11	13	0.096016
chr10	72391964	72392069	72392016	ENSG00000202513.1	+	snRNA	KNOWN	RNU6-805P	1	1	0.174928
chr10	72467749	72473304	72470526	ENSG00000282915.1	-	sense_intronic	KNOWN	RP11-205A8.4	1	2	0.131047
chr10	72483245	72483812	72483528	ENSG00000276531.1	+	unprocessed_pseudogene	KNOWN	RP11-205A8.3	1	1	0.115579
chr10	72501746	72502956	72502351	ENSG00000226163.1	+	antisense	KNOWN	RP11-167P22.3	1	2	0.147335
chr10	72560264	72560456	72560360	ENSG00000230609.1	+	processed_pseudogene	KNOWN	RP11-167P22.4	1	1	-0.081491
chr10	72582803	72583086	72582944	ENSG00000272536.2	+	misc_RNA	KNOWN	RN7SL840P	1	1	0.212286
chr10	72636497	72636765	72636631	ENSG00000231471.1	-	processed_pseudogene	KNOWN	HMGN2P34	1	1	0.163782
chr10	72643011	72644650	72643830	ENSG00000238215.1	+	processed_pseudogene	KNOWN	RP11-167P22.5	1	2	0.163782
chr10	72654165	72654276	72654220	ENSG00000201881.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.031329
chr10	72692131	72887694	72789912	ENSG00000156026.14	+	protein_coding	KNOWN	MCU	11	9	0.190094
chr10	72721029	72721100	72721064	ENSG00000266719.1	+	miRNA	KNOWN	MIR4676	1	1	0.187340
chr10	72730557	72731175	72730866	ENSG00000280166.1	+	TEC	KNOWN	RP11-354E23.3	1	1	0.359339
chr10	72756398	72757016	72756707	ENSG00000279502.1	+	TEC	KNOWN	RP11-354E23.4	1	1	0.149543
chr10	72766560	72767052	72766806	ENSG00000272627.1	+	sense_intronic	KNOWN	RP11-354E23.5	1	1	0.149543
chr10	72893581	72933033	72913307	ENSG00000138315.12	+	protein_coding	KNOWN	OIT3	2	9	0.135483
chr10	72917641	72918534	72918087	ENSG00000215086.2	-	processed_pseudogene	KNOWN	NPM1P24	1	1	0.152113
chr10	72935170	72954778	72944974	ENSG00000138308.5	-	protein_coding	KNOWN	PLA2G12B	1	4	0.152494
chr10	73005833	73006595	73006214	ENSG00000213700.3	-	processed_pseudogene	KNOWN	RPL17P50	1	2	0.117083
chr10	73007217	73096974	73052095	ENSG00000122884.12	-	protein_coding	KNOWN	P4HA1	6	15	0.247514
chr10	73065126	73065467	73065296	ENSG00000232646.1	+	processed_pseudogene	KNOWN	RP11-344N10.4	1	3	0.343124
chr10	73071295	73074008	73072651	ENSG00000237768.2	+	antisense	KNOWN	RP11-344N10.2	1	2	0.075690
chr10	73082494	73082595	73082544	ENSG00000201047.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.075690
chr10	73098044	73101297	73099670	ENSG00000272630.1	-	lincRNA	KNOWN	RP11-344N10.5	1	2	0.289931
chr10	73110375	73131828	73121101	ENSG00000166321.13	+	protein_coding	KNOWN	NUDT13	8	10	0.245258
chr10	73124573	73125532	73125052	ENSG00000272599.2	-	antisense	KNOWN	RP11-152N13.16	2	1	0.278143
chr10	73126080	73126207	73126143	ENSG00000221164.1	-	snoRNA	NOVEL	SNORA11	1	1	0.278143
chr10	73130155	73169055	73149605	ENSG00000122882.10	-	protein_coding	KNOWN	ECD	8	15	0.047992
chr10	73168166	73244504	73206335	ENSG00000138286.14	+	protein_coding	KNOWN	FAM149B1	8	14	0.347448
chr10	73183362	73248862	73216112	ENSG00000213551.4	-	protein_coding	KNOWN	DNAJC9	4	5	0.314559
chr10	73192223	73192325	73192274	ENSG00000199201.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.165158
chr10	73199826	73201225	73200525	ENSG00000227382.1	+	processed_pseudogene	KNOWN	EIF4A2P2	1	2	0.165158
chr10	73247360	73276984	73262172	ENSG00000236756.4	+	antisense	KNOWN	DNAJC9-AS1	2	4	0.285564
chr10	73248843	73252693	73250768	ENSG00000182180.13	-	protein_coding	KNOWN	MRPS16	5	3	0.348252
chr10	73252791	73254349	73253570	ENSG00000227540.1	+	antisense	KNOWN	RP11-152N13.5	3	3	0.331179
chr10	73253759	73358859	73306309	ENSG00000156042.17	-	protein_coding	KNOWN	CFAP70	8	28	0.068958
chr10	73279062	73279168	73279115	ENSG00000200356.1	+	snRNA	KNOWN	RNU6-833P	1	1	0.116239
chr10	73346936	73347048	73346992	ENSG00000207473.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.100925
chr10	73375101	73414076	73394588	ENSG00000138279.15	-	protein_coding	KNOWN	ANXA7	5	14	0.341028
chr10	73381433	73383496	73382464	ENSG00000233144.1	+	antisense	KNOWN	RP11-537A6.9	1	2	0.517083
chr10	73422259	73422696	73422477	ENSG00000229659.1	-	processed_pseudogene	KNOWN	RP11-345K20.2	1	1	0.575924
chr10	73423579	73433561	73428570	ENSG00000166343.9	-	protein_coding	KNOWN	MSS51	3	7	0.510706
chr10	73428667	73428736	73428701	ENSG00000266344.1	+	miRNA	NOVEL	AL353731.1	1	1	0.575924
chr10	73436428	73496024	73466226	ENSG00000107758.15	-	protein_coding	KNOWN	PPP3CB	6	14	0.287629
chr10	73495525	73520070	73507797	ENSG00000221817.9	+	processed_transcript	KNOWN	PPP3CB-AS1	15	6	0.505372
chr10	73497538	73625953	73561745	ENSG00000166348.17	-	protein_coding	KNOWN	USP54	18	23	0.363111
chr10	73529051	73529157	73529104	ENSG00000207327.1	-	snRNA	KNOWN	RNU6-883P	1	1	0.513818
chr10	73537803	73538391	73538097	ENSG00000237139.1	+	processed_pseudogene	KNOWN	RP11-137L10.5	1	2	0.023460
chr10	73625996	73626790	73626393	ENSG00000268584.1	+	antisense	KNOWN	RP11-464F9.20	1	1	0.257330
chr10	73630556	73631490	73631023	ENSG00000272791.1	+	lincRNA	KNOWN	RP11-464F9.22	1	1	0.538838
chr10	73631654	73641757	73636705	ENSG00000177791.11	-	protein_coding	KNOWN	MYOZ1	1	6	0.538838
chr10	73644881	73663803	73654342	ENSG00000166317.11	-	protein_coding	KNOWN	SYNPO2L	3	4	0.669745
chr10	73654039	73674719	73664379	ENSG00000271848.1	+	antisense	KNOWN	RP11-464F9.21	2	3	0.732102
chr10	73674285	73698159	73686222	ENSG00000172650.12	-	protein_coding	KNOWN	AGAP5	5	10	0.607318
chr10	73674295	73730466	73702380	ENSG00000242288.9	-	processed_transcript	KNOWN	RP11-464F9.1	1	19	0.442688
chr10	73699151	73730487	73714819	ENSG00000271816.1	-	processed_transcript	KNOWN	BMS1P4	1	12	0.322776
chr10	73703735	73713581	73708658	ENSG00000272140.2	-	lincRNA	KNOWN	RP11-574K11.29	2	3	0.299476
chr10	73706490	73706613	73706551	ENSG00000252072.1	+	rRNA	KNOWN	RNA5SP320	1	1	0.277024
chr10	73715843	73730469	73723156	ENSG00000242338.6	-	transcribed_unprocessed_pseudogene	KNOWN	BMS1P4	2	10	0.349884
chr10	73730562	73737311	73733936	ENSG00000250959.2	+	transcribed_unprocessed_pseudogene	KNOWN	GLUD1P3	2	3	0.685567
chr10	73731824	73733638	73732731	ENSG00000235316.1	+	processed_pseudogene	KNOWN	DUSP8P5	1	1	0.685567
chr10	73740538	73740823	73740680	ENSG00000270808.1	-	processed_pseudogene	KNOWN	RP11-574K11.27	1	1	0.685567
chr10	73742995	73744230	73743612	ENSG00000279088.1	-	TEC	KNOWN	RP11-574K11.24	1	1	0.685567
chr10	73744384	73772161	73758272	ENSG00000176986.15	+	protein_coding	KNOWN	SEC24C	7	24	0.821853
chr10	73769264	73772862	73771063	ENSG00000279689.1	-	TEC	KNOWN	RP11-574K11.32	1	1	0.883979
chr10	73772291	73780251	73776271	ENSG00000196968.10	+	protein_coding	KNOWN	FUT11	4	3	0.892054
chr10	73782047	73783652	73782849	ENSG00000172586.7	+	protein_coding	KNOWN	CHCHD1	2	3	0.892054
chr10	73785582	73801797	73793689	ENSG00000214655.10	+	protein_coding	KNOWN	ZSWIM8	23	27	1.199340
chr10	73791218	73791490	73791354	ENSG00000280238.1	+	TEC	KNOWN	RP11-574K11.26	1	1	1.314384
chr10	73796514	73811651	73804082	ENSG00000272916.5	-	protein_coding	KNOWN	RP11-574K11.31	2	17	1.308658
chr10	73796514	73801399	73798956	ENSG00000272589.1	-	antisense	KNOWN	ZSWIM8-AS1	1	4	1.314384
chr10	73801911	73811798	73806854	ENSG00000166507.16	-	protein_coding	KNOWN	NDST2	6	15	1.304837
chr10	73812501	73874591	73843546	ENSG00000148660.20	-	protein_coding	KNOWN	CAMK2G	14	22	1.026846
chr10	73813518	73814737	73814127	ENSG00000224195.1	+	antisense	KNOWN	RP11-574K11.5	1	2	1.261917
chr10	73841833	73847115	73844474	ENSG00000229990.3	+	antisense	KNOWN	RP11-574K11.8	1	2	0.917741
chr10	73909177	73917497	73913337	ENSG00000122861.15	+	protein_coding	KNOWN	PLAU	5	11	0.696238
chr10	73909969	73922777	73916373	ENSG00000222047.8	-	protein_coding	KNOWN	C10orf55	2	5	0.698916
chr10	73995193	74121363	74058278	ENSG00000035403.16	+	protein_coding	KNOWN	VCL	8	23	0.258444
chr10	74005137	74027915	74016526	ENSG00000225761.1	+	sense_intronic	KNOWN	RP11-417O11.5	1	2	0.199152
chr10	74120255	74151063	74135659	ENSG00000185009.12	-	protein_coding	KNOWN	AP3M1	4	10	0.344686
chr10	74151185	74709303	74430244	ENSG00000156110.13	+	protein_coding	KNOWN	ADK	6	11	-0.009788
chr10	74344550	74344805	74344677	ENSG00000236900.1	-	processed_pseudogene	KNOWN	TIMM9P1	1	1	0.126549
chr10	74371535	74372416	74371975	ENSG00000214629.3	+	processed_pseudogene	KNOWN	RPSAP6	1	1	-0.087987
chr10	74423435	74424014	74423724	ENSG00000213731.2	-	processed_pseudogene	KNOWN	RAB5CP1	1	1	-0.195448
chr10	74506081	74530553	74518317	ENSG00000232342.7	-	antisense	KNOWN	RP11-46O21.2	3	5	-0.134560
chr10	74527584	74527947	74527765	ENSG00000226253.1	+	processed_pseudogene	KNOWN	MRPL35P3	1	1	-0.136827
chr10	74551392	74551493	74551442	ENSG00000206756.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.110026
chr10	74641410	74641776	74641593	ENSG00000271710.1	-	processed_pseudogene	KNOWN	RP11-312P12.3	1	1	-0.111803
chr10	74654956	74656131	74655543	ENSG00000214626.2	+	processed_pseudogene	KNOWN	POLR3DP1	1	1	0.074610
chr10	74744386	74744707	74744546	ENSG00000213525.3	-	processed_pseudogene	KNOWN	RP11-383B24.3	1	1	-0.187081
chr10	74821610	74822130	74821870	ENSG00000272748.1	-	lincRNA	KNOWN	RP11-222G7.2	1	1	0.289931
chr10	74825582	75032622	74929102	ENSG00000156650.12	+	protein_coding	KNOWN	KAT6B	7	18	0.113720
chr10	75003055	75025174	75014114	ENSG00000234149.1	-	antisense	KNOWN	RP11-77G23.2	1	2	-0.075691
chr10	75023475	75024251	75023863	ENSG00000227186.1	-	antisense	KNOWN	RP11-77G23.5	1	2	-0.108148
chr10	75037836	75058514	75048175	ENSG00000188716.5	-	protein_coding	KNOWN	DUPD1	1	3	0.552152
chr10	75089248	75089725	75089486	ENSG00000237882.1	-	processed_pseudogene	KNOWN	PPIAP13	1	1	0.293290
chr10	75094432	75109221	75101826	ENSG00000079393.20	-	protein_coding	KNOWN	DUSP13	15	8	0.476815
chr10	75099586	75182123	75140854	ENSG00000156671.12	+	protein_coding	KNOWN	SAMD8	4	6	0.284835
chr10	75125217	75125862	75125539	ENSG00000232437.1	+	processed_pseudogene	KNOWN	RP11-487I5.4	1	2	0.582043
chr10	75184958	75185058	75185008	ENSG00000263626.1	+	miRNA	NOVEL	AL392111.1	1	1	0.183914
chr10	75210154	75231448	75220801	ENSG00000165637.13	+	protein_coding	KNOWN	VDAC2	14	11	0.456842
chr10	75233969	75236030	75234999	ENSG00000165644.10	-	protein_coding	KNOWN	COMTD1	7	7	0.576071
chr10	75269392	75269545	75269468	ENSG00000227271.1	-	processed_pseudogene	KNOWN	RPL39P25	1	1	0.471184
chr10	75269819	75373500	75321659	ENSG00000226051.6	+	lincRNA	KNOWN	ZNF503-AS1	7	6	-0.072899
chr10	75276376	75276646	75276511	ENSG00000233313.2	-	processed_pseudogene	KNOWN	HMGA1P5	1	1	0.322699
chr10	75279726	75401246	75340486	ENSG00000270087.5	-	lincRNA	KNOWN	RP11-399K21.11	2	4	-0.047247
chr10	75288333	75288682	75288507	ENSG00000223428.1	-	transcribed_processed_pseudogene	KNOWN	RP11-399K21.5	1	1	0.322699
chr10	75382393	75382844	75382618	ENSG00000236797.1	-	transcribed_processed_pseudogene	KNOWN	SPA17P1	1	1	0.151801
chr10	75397830	75401906	75399868	ENSG00000165655.15	-	protein_coding	KNOWN	ZNF503	2	4	0.225475
chr10	75401519	75408982	75405250	ENSG00000237149.5	+	antisense	KNOWN	ZNF503-AS2	6	2	0.225475
chr10	75408973	75409326	75409149	ENSG00000273248.1	-	lincRNA	KNOWN	RP11-399K21.13	1	1	0.225475
chr10	75409157	75411842	75410499	ENSG00000272692.1	+	lincRNA	KNOWN	RP11-399K21.14	1	3	0.323308
chr10	75430571	75431588	75431079	ENSG00000236842.1	-	antisense	KNOWN	RP11-399K21.10	1	2	0.223636
chr10	75431453	76560167	75995810	ENSG00000148655.14	+	protein_coding	KNOWN	C10orf11	16	8	-0.190228
chr10	75450081	75451725	75450903	ENSG00000279814.1	+	TEC	KNOWN	RP11-399K21.12	1	1	-0.489556
chr10	75552458	75552553	75552505	ENSG00000207583.1	+	miRNA	KNOWN	MIR606	1	1	-0.172771
chr10	75568543	75568639	75568591	ENSG00000277338.1	+	miRNA	NOVEL	AL589863.1	1	1	-0.172771
chr10	75642476	75643106	75642791	ENSG00000268659.2	+	sense_intronic	KNOWN	RP11-310J24.3	1	1	-0.447374
chr10	75742740	75743755	75743247	ENSG00000228280.1	+	sense_intronic	KNOWN	RP11-367B6.2	1	2	-0.447034
chr10	76127251	76127311	76127281	ENSG00000221232.1	-	miRNA	NOVEL	AC012047.1	1	1	0.091992
chr10	76242022	76242301	76242161	ENSG00000265486.2	-	misc_RNA	KNOWN	RN7SL518P	1	1	-0.236062
chr10	76260800	76260903	76260851	ENSG00000201954.1	-	snRNA	KNOWN	RNU6-673P	1	1	-0.333099
chr10	76270206	76270800	76270503	ENSG00000278992.1	+	TEC	KNOWN	RP11-43N22.1	1	1	-0.146795
chr10	76350749	76351228	76350988	ENSG00000281042.1	-	protein_coding	KNOWN	AC013286.1	1	2	-0.423708
chr10	76437408	76438775	76438091	ENSG00000230575.1	-	antisense	KNOWN	RP11-369F10.2	1	2	-0.062731
chr10	76558350	76560994	76559672	ENSG00000269256.1	-	antisense	KNOWN	RP11-325D15.2	1	2	0.100925
chr10	76818713	76818778	76818745	ENSG00000277257.1	-	miRNA	NOVEL	AC013738.1	1	1	-0.094421
chr10	76835377	76835502	76835439	ENSG00000252888.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.146356
chr10	76836568	76836861	76836714	ENSG00000224948.1	+	processed_pseudogene	KNOWN	ATP5G1P8	1	1	-0.146356
chr10	76869601	77638595	77254098	ENSG00000156113.20	-	protein_coding	KNOWN	KCNMA1	25	30	0.158991
chr10	76888044	76980624	76934334	ENSG00000236467.8	+	antisense	KNOWN	KCNMA1-AS1	10	5	-0.013483
chr10	77147652	77150100	77148876	ENSG00000225497.5	+	antisense	KNOWN	KCNMA1-AS2	2	2	-0.012432
chr10	77313941	77315694	77314817	ENSG00000224500.1	+	antisense	KNOWN	RP11-328K22.1	1	2	0.343531
chr10	77354404	77376613	77365508	ENSG00000225652.1	+	antisense	KNOWN	KCNMA1-AS3	1	5	0.213314
chr10	77433572	77433782	77433677	ENSG00000228092.1	-	processed_pseudogene	KNOWN	COX6CP15	1	1	0.396145
chr10	77587049	77587159	77587104	ENSG00000199592.1	+	rRNA	KNOWN	RNA5SP321	1	1	0.330649
chr10	77730766	77734769	77732767	ENSG00000213514.2	+	processed_pseudogene	KNOWN	RP11-428P16.2	1	2	0.061131
chr10	77738246	77739015	77738630	ENSG00000277981.1	+	unprocessed_pseudogene	KNOWN	RP11-428P16.3	1	1	0.061131
chr10	77776951	77777055	77777003	ENSG00000199664.1	-	snRNA	KNOWN	RNU6-1266P	1	1	0.526929
chr10	77780337	77781876	77781106	ENSG00000213513.3	-	processed_pseudogene	KNOWN	RP13-39P12.2	1	1	0.526929
chr10	77782866	77793176	77788021	ENSG00000228748.2	+	antisense	KNOWN	RP13-39P12.3	3	2	0.622857
chr10	77790791	77926526	77858658	ENSG00000151208.16	-	protein_coding	KNOWN	DLG5	10	32	0.629358
chr10	77866875	77869610	77868242	ENSG00000204049.1	+	antisense	KNOWN	RP11-126H7.4	1	2	0.617851
chr10	77912271	77912545	77912408	ENSG00000243446.3	-	misc_RNA	KNOWN	RN7SL284P	1	1	0.549842
chr10	77912280	77912362	77912321	ENSG00000281632.1	-	miRNA	NOVEL	AL391421.1	1	1	0.549842
chr10	77927372	77929824	77928598	ENSG00000233871.2	+	processed_transcript	KNOWN	DLG5-AS1	2	2	0.549842
chr10	77953495	77953876	77953685	ENSG00000234612.1	+	processed_pseudogene	KNOWN	H2AFZP5	1	1	0.422332
chr10	77966173	77966440	77966306	ENSG00000274686.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.422332
chr10	77969251	78029545	77999398	ENSG00000148606.12	-	protein_coding	KNOWN	POLR3A	5	31	0.517170
chr10	78033760	78056812	78045286	ENSG00000138326.18	+	protein_coding	KNOWN	RPS24	14	7	0.367682
chr10	78068623	78069538	78069080	ENSG00000231957.2	-	processed_pseudogene	KNOWN	GNAI2P2	1	1	0.502780
chr10	78176928	78178186	78177557	ENSG00000283096.1	+	lincRNA	KNOWN	RP11-157J13.1	1	1	0.218749
chr10	78179174	78675109	78427141	ENSG00000282863.1	+	lincRNA	KNOWN	RP11-90J7.3	3	4	0.346284
chr10	78179185	78551355	78365270	ENSG00000230417.11	+	lincRNA	KNOWN	LINC00856	17	5	0.358935
chr10	78293842	78301003	78297422	ENSG00000229543.1	+	lincRNA	KNOWN	RP11-90J7.2	1	2	0.291556
chr10	78352597	78356100	78354348	ENSG00000230229.1	+	lincRNA	KNOWN	RP11-90J7.4	1	2	0.477017
chr10	78367507	78367623	78367565	ENSG00000201393.1	+	snoRNA	NOVEL	SNORA71	1	1	0.477017
chr10	78538391	78551719	78545055	ENSG00000282952.1	-	lincRNA	KNOWN	RP11-17G2.1	1	3	0.230649
chr10	78696062	78697022	78696542	ENSG00000228683.1	-	lincRNA	KNOWN	RP11-31E13.2	1	2	0.356265
chr10	78943328	79067895	79005611	ENSG00000224596.7	-	antisense	KNOWN	ZMIZ1-AS1	3	10	0.544680
chr10	79000484	79003803	79002143	ENSG00000229569.1	-	lincRNA	KNOWN	RP11-481G8.2	1	2	0.333493
chr10	79069035	79316528	79192781	ENSG00000108175.16	+	protein_coding	KNOWN	ZMIZ1	5	25	0.756524
chr10	79347469	79355337	79351403	ENSG00000108179.13	+	protein_coding	KNOWN	PPIF	5	6	0.573498
chr10	79382325	79445627	79413976	ENSG00000165424.6	-	protein_coding	KNOWN	ZCCHC24	2	4	0.781225
chr10	79382328	79409274	79395801	ENSG00000235426.2	+	antisense	KNOWN	RP11-342M3.5	1	2	0.560256
chr10	79499666	79499984	79499825	ENSG00000259021.2	-	processed_pseudogene	KNOWN	TPRX1P1	1	1	0.578583
chr10	79504073	79506281	79505177	ENSG00000241317.1	-	lincRNA	KNOWN	RP11-342M3.1	1	2	0.578583
chr10	79507597	79510922	79509259	ENSG00000235705.5	-	transcribed_processed_pseudogene	KNOWN	RP11-342M3.2	3	3	0.536981
chr10	79512601	79516440	79514520	ENSG00000253626.3	+	protein_coding	KNOWN	EIF5AL1	1	1	0.428717
chr10	79526508	79526631	79526569	ENSG00000271985.1	-	processed_pseudogene	KNOWN	RP11-589B3.7	1	1	0.428717
chr10	79544087	79544356	79544221	ENSG00000232965.1	+	processed_pseudogene	KNOWN	RPS12P18	1	1	0.099297
chr10	79555852	79560397	79558124	ENSG00000185303.15	-	protein_coding	KNOWN	SFTPA2	4	6	0.384443
chr10	79582298	79584877	79583587	ENSG00000219430.2	-	unprocessed_pseudogene	KNOWN	MBL3P	1	4	-0.320504
chr10	79595294	79595660	79595477	ENSG00000225827.1	-	processed_pseudogene	KNOWN	SFTPA3P	1	1	-0.018755
chr10	79610939	79615455	79613197	ENSG00000122852.14	+	protein_coding	KNOWN	SFTPA1	6	6	0.129273
chr10	79628757	79632188	79630472	ENSG00000226676.1	-	lincRNA	KNOWN	RP11-589B3.6	2	3	0.162871
chr10	79660891	79677996	79669443	ENSG00000244733.5	+	lincRNA	KNOWN	RP11-506M13.3	1	5	-0.426000
chr10	79663088	79826594	79744841	ENSG00000225484.6	-	antisense	KNOWN	NUTM2B-AS1	13	7	0.042870
chr10	79663192	79664786	79663989	ENSG00000272489.1	+	sense_intronic	KNOWN	RP11-182L21.5	1	1	-0.548466
chr10	79681973	79684094	79683033	ENSG00000280355.1	-	TEC	KNOWN	RP11-119F19.5	1	1	-0.286520
chr10	79682997	79685436	79684216	ENSG00000278616.1	+	processed_pseudogene	KNOWN	BEND3P3	1	1	-0.286520
chr10	79684494	79684983	79684738	ENSG00000224886.2	-	transcribed_processed_pseudogene	KNOWN	RP11-119F19.4	1	1	-0.286520
chr10	79703227	79714681	79708954	ENSG00000188199.10	+	protein_coding	KNOWN	NUTM2B	3	7	0.364496
chr10	79825902	79827602	79826752	ENSG00000272447.1	+	lincRNA	KNOWN	RP11-182L21.6	1	1	-0.028302
chr10	79841358	79850878	79846118	ENSG00000228570.7	+	protein_coding	KNOWN	NUTM2E	2	7	0.099480
chr10	79860573	79861806	79861189	ENSG00000214695.3	+	processed_pseudogene	KNOWN	NPAP1P2	1	1	0.641195
chr10	79870375	79873903	79872139	ENSG00000204437.7	-	unprocessed_pseudogene	KNOWN	CTSLP6	1	7	0.127096
chr10	79892148	79893175	79892661	ENSG00000214584.3	-	processed_pseudogene	KNOWN	PGGT1BP2	1	1	-0.804915
chr10	79904898	79950336	79927617	ENSG00000242600.7	+	unitary_pseudogene	KNOWN	MBL1P	4	6	0.077361
chr10	79906605	79907856	79907230	ENSG00000283101.1	+	transcribed_unprocessed_pseudogene	KNOWN	BMS1P21	1	2	-0.804915
chr10	79937740	79982614	79960177	ENSG00000133661.15	-	protein_coding	KNOWN	SFTPD	2	8	0.089402
chr10	79968213	79973213	79970713	ENSG00000273372.1	+	antisense	KNOWN	SFTPD-AS1	1	1	-0.157987
chr10	79970963	79973213	79972088	ENSG00000280259.1	-	TEC	KNOWN	RP11-479O17.9	1	1	-0.308546
chr10	79981839	79982212	79982025	ENSG00000235924.1	+	processed_pseudogene	KNOWN	ZNRF2P3	1	1	-0.308546
chr10	79982910	79983240	79983075	ENSG00000225100.2	-	processed_pseudogene	KNOWN	DPY19L2P5	1	1	-0.308546
chr10	80017713	80017911	80017812	ENSG00000229616.2	-	unprocessed_pseudogene	KNOWN	RP11-369J21.11	1	1	0.124232
chr10	80024737	80025159	80024948	ENSG00000224760.4	-	processed_pseudogene	KNOWN	C1DP3	1	1	0.124232
chr10	80031968	80032393	80032180	ENSG00000236217.4	-	processed_pseudogene	KNOWN	C1DP2	1	1	0.310887
chr10	80040621	80041044	80040832	ENSG00000227515.3	-	processed_pseudogene	KNOWN	C1DP4	1	1	0.310887
chr10	80046860	80078912	80062886	ENSG00000230091.6	-	antisense	KNOWN	TMEM254-AS1	3	6	0.205437
chr10	80053428	80053548	80053488	ENSG00000282432.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-369J21.13	1	1	0.135581
chr10	80078646	80092557	80085601	ENSG00000133678.13	+	protein_coding	KNOWN	TMEM254	13	6	0.230990
chr10	80091411	80091867	80091639	ENSG00000279399.1	-	TEC	KNOWN	RP11-369J21.12	1	1	-0.186473
chr10	80125941	80126317	80126129	ENSG00000230171.1	+	processed_pseudogene	KNOWN	RPL22P18	1	1	-0.068004
chr10	80131682	80145359	80138520	ENSG00000189129.13	+	protein_coding	KNOWN	PLAC9	4	4	0.025266
chr10	80150889	80205572	80178230	ENSG00000122359.17	-	protein_coding	KNOWN	ANXA11	10	17	0.668145
chr10	80193746	80193982	80193864	ENSG00000280954.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.484661
chr10	80207710	80219657	80213683	ENSG00000237523.1	+	lincRNA	KNOWN	LINC00857	2	2	0.401939
chr10	80215851	80216119	80215985	ENSG00000234319.1	-	processed_pseudogene	KNOWN	RPS12P2	1	1	0.382334
chr10	80233664	80245367	80239515	ENSG00000234382.2	+	unprocessed_pseudogene	KNOWN	RP11-40F6.1	1	5	0.037544
chr10	80247219	80247683	80247451	ENSG00000234743.1	-	processed_pseudogene	KNOWN	EIF5AP4	1	1	0.037544
chr10	80249710	80254121	80251915	ENSG00000279359.1	+	TEC	KNOWN	RP11-36D19.9	1	1	0.505635
chr10	80271820	80289684	80280752	ENSG00000151224.12	-	protein_coding	KNOWN	MAT1A	4	9	0.402592
chr10	80297720	80299655	80298687	ENSG00000232950.1	+	processed_pseudogene	KNOWN	ZNF519P1	1	2	-0.253144
chr10	80333771	80334426	80334098	ENSG00000235858.1	+	lincRNA	KNOWN	RP11-36D19.8	1	2	-0.426882
chr10	80336105	80356755	80346430	ENSG00000170788.13	-	protein_coding	KNOWN	DYDC1	5	8	-0.339696
chr10	80344745	80368073	80356409	ENSG00000133665.12	+	protein_coding	KNOWN	DYDC2	7	6	-0.220414
chr10	80407829	80437115	80422472	ENSG00000122378.13	+	protein_coding	KNOWN	FAM213A	6	6	-0.053520
chr10	80454166	80533123	80493644	ENSG00000108219.14	+	protein_coding	KNOWN	TSPAN14	10	12	0.446482
chr10	80529597	80535942	80532769	ENSG00000226659.1	-	antisense	KNOWN	RP11-137H2.4	1	2	0.240246
chr10	80537902	80646560	80592231	ENSG00000178217.13	+	protein_coding	KNOWN	SH2D4B	4	7	-0.033819
chr10	80649797	80653732	80651764	ENSG00000231082.1	+	lincRNA	KNOWN	RP11-514F8.2	1	3	-0.304182
chr10	80716483	80717068	80716775	ENSG00000233353.1	-	processed_pseudogene	KNOWN	RPS7P9	1	1	0.005056
chr10	80749632	80751231	80750431	ENSG00000233703.1	-	processed_pseudogene	KNOWN	RP11-20E23.1	1	2	-0.436544
chr10	80776165	80778088	80777126	ENSG00000231060.1	-	processed_pseudogene	KNOWN	FARSBP1	1	2	-0.778725
chr10	80940665	80941201	80940933	ENSG00000227209.1	-	processed_pseudogene	KNOWN	WARS2P1	1	1	-0.316473
chr10	81136540	81137335	81136937	ENSG00000226466.2	-	processed_pseudogene	KNOWN	RPA2P2	1	1	-0.437628
chr10	81144652	81144731	81144691	ENSG00000265990.1	+	miRNA	NOVEL	AL356154.1	1	1	-0.437628
chr10	81875314	82987179	82431246	ENSG00000185737.12	+	protein_coding	KNOWN	NRG3	9	12	-0.507305
chr10	82050262	82050348	82050305	ENSG00000221378.1	+	miRNA	NOVEL	AL096864.1	1	1	-0.670969
chr10	82224213	82229179	82226696	ENSG00000229458.2	-	antisense	KNOWN	RP11-202D18.2	1	3	-0.702539
chr10	82228985	82232920	82230952	ENSG00000225738.2	-	processed_transcript	KNOWN	NRG3-AS1	3	3	-0.486309
chr10	82340771	82340876	82340823	ENSG00000207275.1	+	snRNA	KNOWN	RNU6-441P	1	1	-0.385486
chr10	82864174	82864259	82864216	ENSG00000274635.1	-	miRNA	NOVEL	AL354749.1	1	1	-0.518062
chr10	83067962	83068071	83068016	ENSG00000200774.1	-	snRNA	KNOWN	RNU6-478P	1	1	-0.421348
chr10	83311628	83314475	83313051	ENSG00000234931.1	-	processed_pseudogene	KNOWN	MARK2P15	1	2	-0.497006
chr10	83437034	83437129	83437081	ENSG00000265268.1	-	miRNA	NOVEL	AL356140.1	1	1	-0.462320
chr10	83672406	83675439	83673922	ENSG00000233945.1	-	lincRNA	KNOWN	RP11-344L13.2	1	3	-0.371409
chr10	83735506	83736493	83735999	ENSG00000223565.1	+	processed_pseudogene	KNOWN	RP11-344L13.1	1	1	-0.570973
chr10	83764358	83764464	83764411	ENSG00000212324.1	+	snRNA	KNOWN	RNU6-129P	1	1	-0.252920
chr10	83911654	83912922	83912288	ENSG00000233258.1	-	lincRNA	KNOWN	RP11-219F10.1	1	2	-0.233494
chr10	84003332	84003479	84003405	ENSG00000200789.1	+	snRNA	KNOWN	RNU1-65P	1	1	-0.198458
chr10	84081429	84081995	84081712	ENSG00000212769.5	+	processed_pseudogene	KNOWN	HMGN2P8	1	2	-0.092091
chr10	84138420	84140582	84139501	ENSG00000271933.1	-	antisense	KNOWN	RP11-338I21.1	1	1	-0.320747
chr10	84139440	84153555	84146497	ENSG00000165678.19	+	protein_coding	KNOWN	GHITM	2	10	-0.370857
chr10	84173738	84185294	84179516	ENSG00000188373.4	+	protein_coding	KNOWN	C10orf99	2	3	-0.219210
chr10	84194635	84219621	84207128	ENSG00000148600.14	+	protein_coding	KNOWN	CDHR1	7	17	0.224861
chr10	84220495	84225589	84223042	ENSG00000204033.9	-	protein_coding	KNOWN	LRIT2	2	4	0.234503
chr10	84231593	84241461	84236527	ENSG00000148602.5	-	protein_coding	KNOWN	LRIT1	1	4	-0.355467
chr10	84245053	84259960	84252506	ENSG00000148604.13	+	protein_coding	KNOWN	RGR	10	7	0.033039
chr10	84279980	84294659	84287319	ENSG00000229404.5	+	lincRNA	KNOWN	LINC00858	2	6	-0.021698
chr10	84328586	84518521	84423553	ENSG00000107771.15	+	protein_coding	KNOWN	CCSER2	10	11	-0.286097
chr10	84389170	84389626	84389398	ENSG00000233189.1	-	processed_pseudogene	KNOWN	RPL12P29	1	1	-0.538485
chr10	84390908	84392045	84391476	ENSG00000225423.1	+	processed_pseudogene	KNOWN	TNPO1P1	1	1	-0.300850
chr10	84454679	84456056	84455367	ENSG00000225928.2	-	processed_pseudogene	KNOWN	CACYBPP1	1	3	-0.320449
chr10	84560443	84561263	84560853	ENSG00000178429.9	+	processed_pseudogene	KNOWN	RPS3AP5	1	1	-0.574685
chr10	84863265	84863362	84863313	ENSG00000238469.1	+	miRNA	NOVEL	AC091487.1	1	1	-0.617107
chr10	85193421	85197958	85195689	ENSG00000237267.1	-	lincRNA	KNOWN	LINC01519	1	3	-0.428539
chr10	85431943	85432515	85432229	ENSG00000223993.1	-	lincRNA	KNOWN	RP11-475D12.1	1	2	-0.346892
chr10	85432863	85448961	85440912	ENSG00000224504.2	+	lincRNA	KNOWN	RP11-475D12.2	1	3	-0.346892
chr10	85449592	85491996	85470794	ENSG00000230962.1	+	lincRNA	KNOWN	LINC01520	1	6	-0.305597
chr10	85526880	85531115	85528997	ENSG00000279910.1	-	TEC	KNOWN	RP11-113E21.2	1	1	-0.561677
chr10	85537379	85537483	85537431	ENSG00000223064.1	+	snRNA	KNOWN	RNU6-325P	1	1	-0.590437
chr10	85555484	85557436	85556460	ENSG00000280134.1	-	TEC	KNOWN	RP11-113E21.3	1	1	-0.300326
chr10	85577731	85607213	85592472	ENSG00000234942.2	+	antisense	KNOWN	GRID1-AS1	3	3	-0.457356
chr10	85599555	86366493	85983024	ENSG00000182771.17	-	protein_coding	KNOWN	GRID1	4	16	-0.154172
chr10	85613017	85613186	85613101	ENSG00000278333.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.219952
chr10	85644073	85648066	85646069	ENSG00000270002.1	+	antisense	KNOWN	RP11-93H12.4	1	2	-0.307939
chr10	85650012	85650260	85650136	ENSG00000252292.1	-	misc_RNA	KNOWN	RN7SKP238	1	1	-0.002052
chr10	85708760	85709167	85708963	ENSG00000236606.1	+	processed_pseudogene	KNOWN	RP11-93H12.3	1	1	-0.521540
chr10	86052448	86052566	86052507	ENSG00000200487.1	+	rRNA	KNOWN	RNA5SP322	1	1	-0.229936
chr10	86264694	86264788	86264741	ENSG00000199104.2	-	miRNA	KNOWN	MIR346	1	1	0.012822
chr10	86302826	86302921	86302873	ENSG00000238803.1	-	miRNA	NOVEL	AL732479.1	1	1	-0.048329
chr10	86435256	86521815	86478535	ENSG00000062650.17	-	protein_coding	KNOWN	WAPL	7	20	-0.034833
chr10	86488446	86488549	86488497	ENSG00000212332.1	+	snRNA	KNOWN	RNU6-780P	1	1	0.110851
chr10	86521945	86525101	86523523	ENSG00000227896.2	+	antisense	KNOWN	RP11-77P6.2	1	2	0.182757
chr10	86630825	86631628	86631226	ENSG00000230507.5	-	processed_pseudogene	KNOWN	RPL7AP8	1	1	-0.100653
chr10	86654557	86666848	86660702	ENSG00000122375.11	+	protein_coding	KNOWN	OPN4	3	11	0.615893
chr10	86668449	86736068	86702258	ENSG00000122367.19	+	protein_coding	KNOWN	LDB3	9	14	0.612241
chr10	86749754	86756298	86753026	ENSG00000272631.1	-	antisense	KNOWN	RP11-359E3.4	1	1	0.231610
chr10	86751611	86751772	86751691	ENSG00000281735.1	-	sRNA	NOVEL	Clostridiales-1	1	1	0.220507
chr10	86756650	86932838	86844744	ENSG00000107779.11	+	protein_coding	KNOWN	BMPR1A	2	13	0.033949
chr10	86854696	86856236	86855466	ENSG00000270874.1	-	processed_pseudogene	KNOWN	RP11-420K10.1	1	3	-0.005856
chr10	86889569	86889733	86889651	ENSG00000200176.1	+	snRNA	KNOWN	RNU1-19P	1	1	-0.288612
chr10	86935540	86969481	86952510	ENSG00000173269.13	-	protein_coding	KNOWN	MMRN2	7	7	0.436275
chr10	86948677	86949875	86949276	ENSG00000281974.1	+	TEC	KNOWN	RP11-411A19.5	1	1	0.310632
chr10	86958618	86963260	86960939	ENSG00000173267.13	+	protein_coding	KNOWN	SNCG	4	5	0.529524
chr10	86965345	86971311	86968328	ENSG00000272734.1	-	processed_transcript	KNOWN	ADIRF-AS1	4	3	0.513592
chr10	86968192	86983934	86976063	ENSG00000148671.13	+	protein_coding	KNOWN	ADIRF	3	4	0.465393
chr10	86970237	86970826	86970531	ENSG00000273413.1	-	antisense	KNOWN	RP11-96C23.15	1	2	0.457077
chr10	86970741	87010126	86990433	ENSG00000271880.1	+	processed_transcript	KNOWN	AGAP11	1	12	0.186709
chr10	86992253	87000435	86996344	ENSG00000240089.2	+	transcribed_unprocessed_pseudogene	KNOWN	BMS1P3	1	6	-0.075118
chr10	86992406	87010203	87001304	ENSG00000151303.11	+	processed_transcript	KNOWN	RP11-96C23.13	1	7	-0.069428
chr10	86993432	87024732	87009082	ENSG00000272508.1	+	processed_transcript	KNOWN	RP11-96C23.14	1	10	0.158547
chr10	87001636	87009905	87005770	ENSG00000261011.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-96C23.11	1	4	-0.075118
chr10	87009785	87015782	87012783	ENSG00000229969.1	-	antisense	KNOWN	RP11-96C23.10	1	2	0.403585
chr10	87020306	87024730	87022518	ENSG00000188100.8	+	protein_coding	KNOWN	FAM25A	1	3	0.421299
chr10	87027184	87027477	87027330	ENSG00000271573.1	+	processed_pseudogene	KNOWN	RP11-96C23.12	1	1	0.421299
chr10	87041238	87041341	87041289	ENSG00000200253.1	-	snRNA	KNOWN	RNU6-529P	1	1	0.293988
chr10	87050486	87094866	87072676	ENSG00000148672.8	-	protein_coding	KNOWN	GLUD1	4	13	0.266411
chr10	87094161	87191468	87142814	ENSG00000122376.11	+	protein_coding	KNOWN	FAM35A	3	10	0.084909
chr10	87113954	87115523	87114738	ENSG00000237280.1	+	sense_intronic	KNOWN	RP11-96C23.9	1	2	0.211291
chr10	87154041	87154369	87154205	ENSG00000273946.1	-	misc_RNA	KNOWN	RN7SL733P	1	1	0.013040
chr10	87203875	87342612	87273243	ENSG00000223482.7	-	antisense	KNOWN	NUTM2A-AS1	12	6	-0.033080
chr10	87225448	87236908	87231178	ENSG00000184923.12	+	protein_coding	KNOWN	NUTM2A	2	7	0.235443
chr10	87342736	87357882	87350309	ENSG00000224914.2	+	lincRNA	KNOWN	LINC00863	1	5	-0.003585
chr10	87357668	87370695	87364181	ENSG00000214562.13	+	protein_coding	KNOWN	NUTM2D	4	8	0.361625
chr10	87376896	87378481	87377688	ENSG00000237740.1	+	processed_pseudogene	KNOWN	NPAP1P3	1	1	0.709846
chr10	87386685	87390203	87388444	ENSG00000236417.2	-	unprocessed_pseudogene	KNOWN	CTSLP1	1	7	0.674943
chr10	87397023	87424792	87410907	ENSG00000228055.2	-	lincRNA	KNOWN	LINC00864	2	3	-0.206822
chr10	87408044	87408258	87408151	ENSG00000231569.1	-	processed_pseudogene	KNOWN	RP11-399L7.3	1	1	0.107933
chr10	87504875	87553460	87529167	ENSG00000107789.15	+	protein_coding	KNOWN	MINPP1	4	5	-0.039369
chr10	87591607	87606024	87598815	ENSG00000223761.1	-	lincRNA	KNOWN	RP11-57C13.4	1	2	-0.416473
chr10	87607985	87659279	87633632	ENSG00000225913.2	+	lincRNA	KNOWN	RP11-57C13.6	1	4	-0.070207
chr10	87610163	87660003	87635083	ENSG00000196566.2	-	antisense	KNOWN	RP11-57C13.3	1	4	-0.058279
chr10	87642607	87642954	87642780	ENSG00000234192.1	+	processed_pseudogene	KNOWN	RP11-57C13.5	1	1	0.005008
chr10	87659613	87747705	87703659	ENSG00000198682.12	+	protein_coding	KNOWN	PAPSS2	4	13	0.068536
chr10	87751512	87841343	87796427	ENSG00000138138.13	-	protein_coding	KNOWN	ATAD1	3	10	-0.108318
chr10	87817928	87845612	87831770	ENSG00000223820.5	+	transcribed_unprocessed_pseudogene	KNOWN	CFL1P1	4	4	-0.142634
chr10	87832818	87833098	87832958	ENSG00000243782.3	-	misc_RNA	KNOWN	RN7SL78P	1	1	0.011821
chr10	87859161	87863437	87861299	ENSG00000227268.3	-	protein_coding	KNOWN	KLLN	1	1	0.100029
chr10	87863113	87971930	87917521	ENSG00000171862.9	+	protein_coding	KNOWN	PTEN	7	9	-0.004960
chr10	87878692	87880427	87879559	ENSG00000224745.1	+	sense_intronic	KNOWN	RP11-380G5.2	1	3	0.195085
chr10	87945502	87946024	87945763	ENSG00000213613.2	+	processed_pseudogene	KNOWN	RP11-380G5.3	1	1	-0.077933
chr10	87994618	87994695	87994656	ENSG00000200891.1	-	snoRNA	NOVEL	SNORD74	1	1	-0.017633
chr10	88048135	88049823	88048979	ENSG00000227905.1	-	processed_pseudogene	KNOWN	MED6P1	1	2	0.053518
chr10	88259129	88259372	88259250	ENSG00000275015.1	-	unprocessed_pseudogene	KNOWN	RP11-129G17.2	1	1	0.055650
chr10	88273864	88584530	88429197	ENSG00000184719.11	-	protein_coding	KNOWN	RNLS	5	7	-0.217511
chr10	88585638	88585733	88585685	ENSG00000201548.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.492971
chr10	88586753	88606976	88596864	ENSG00000204022.9	+	protein_coding	KNOWN	LIPJ	3	11	-0.217095
chr10	88618223	88618934	88618578	ENSG00000237205.1	-	processed_pseudogene	KNOWN	RPL7P34	1	1	-0.192576
chr10	88664441	88678814	88671627	ENSG00000182333.14	+	protein_coding	KNOWN	LIPF	6	11	-0.522663
chr10	88699683	88700401	88700042	ENSG00000271408.1	+	processed_pseudogene	KNOWN	RP11-186O14.7	1	1	-0.242009
chr10	88724544	88752786	88738665	ENSG00000204021.3	+	protein_coding	KNOWN	LIPK	1	9	0.073493
chr10	88727485	88728914	88728199	ENSG00000226358.1	+	processed_pseudogene	KNOWN	KRT8P38	1	1	-0.182631
chr10	88761406	88778242	88769824	ENSG00000204020.5	+	protein_coding	KNOWN	LIPN	1	9	-0.274886
chr10	88785600	88787061	88786330	ENSG00000235150.1	-	processed_pseudogene	KNOWN	RCBTB2P1	1	1	-0.475693
chr10	88802730	88820546	88811638	ENSG00000173239.13	+	protein_coding	KNOWN	LIPM	2	9	-0.192215
chr10	88822132	88851818	88836975	ENSG00000152766.5	-	protein_coding	KNOWN	ANKRD22	2	6	-0.135073
chr10	88876450	88877544	88876997	ENSG00000234256.2	+	processed_pseudogene	KNOWN	PTCD2P2	1	1	-0.090872
chr10	88879734	88975153	88927443	ENSG00000138134.11	+	protein_coding	KNOWN	STAMBPL1	6	11	-0.033167
chr10	88932390	88940820	88936605	ENSG00000180139.11	+	antisense	KNOWN	ACTA2-AS1	4	5	0.284637
chr10	88935074	88991390	88963232	ENSG00000107796.12	-	protein_coding	KNOWN	ACTA2	7	9	0.019121
chr10	88990531	89015785	89003158	ENSG00000026103.19	+	protein_coding	KNOWN	FAS	19	10	0.311344
chr10	88992370	88992539	88992454	ENSG00000275693.1	+	misc_RNA	NOVEL	FAS-AS1	1	1	0.378873
chr10	89015836	89017059	89016447	ENSG00000261438.1	+	sense_overlapping	KNOWN	RP11-399O19.9	1	1	0.084130
chr10	89063335	89063411	89063373	ENSG00000265375.1	-	miRNA	KNOWN	MIR4679-1	1	1	-0.167875
chr10	89139044	89139458	89139251	ENSG00000233292.1	+	processed_pseudogene	KNOWN	RP11-341B24.3	1	1	-0.165989
chr10	89205629	89207314	89206471	ENSG00000138135.6	-	protein_coding	KNOWN	CH25H	1	1	-0.024822
chr10	89213569	89414557	89314063	ENSG00000107798.17	-	protein_coding	KNOWN	LIPA	8	10	0.052226
chr10	89264340	89264406	89264373	ENSG00000266769.1	-	miRNA	NOVEL	AL353751.1	1	1	0.091992
chr10	89283765	89292125	89287945	ENSG00000232110.7	+	antisense	KNOWN	RP11-149I23.3	3	3	0.172789
chr10	89301955	89309276	89305615	ENSG00000119922.8	+	protein_coding	KNOWN	IFIT2	2	3	0.203309
chr10	89327894	89340971	89334432	ENSG00000119917.13	+	protein_coding	KNOWN	IFIT3	2	2	0.224538
chr10	89362294	89363487	89362890	ENSG00000224289.1	+	unprocessed_pseudogene	KNOWN	IFIT6P	1	1	0.091992
chr10	89378056	89385205	89381630	ENSG00000204010.3	+	protein_coding	KNOWN	IFIT1B	1	2	0.156441
chr10	89392546	89406486	89399516	ENSG00000185745.9	+	protein_coding	KNOWN	IFIT1	2	3	-0.198264
chr10	89414586	89421001	89417793	ENSG00000152778.8	+	protein_coding	KNOWN	IFIT5	1	2	0.189458
chr10	89430299	89556641	89493470	ENSG00000152779.13	-	protein_coding	KNOWN	SLC16A12	2	8	-0.085191
chr10	89456064	89468140	89462102	ENSG00000234452.5	+	antisense	KNOWN	SLC16A12-AS1	2	3	-0.235894
chr10	89579497	89645572	89612534	ENSG00000152782.16	-	protein_coding	KNOWN	PANK1	5	7	-0.320384
chr10	89592743	89592829	89592786	ENSG00000198997.1	-	miRNA	KNOWN	MIR107	1	1	-0.345886
chr10	89644603	89645223	89644913	ENSG00000249962.1	-	processed_pseudogene	KNOWN	RP11-80H5.5	1	1	-0.101831
chr10	89645282	89650667	89647974	ENSG00000232936.5	+	antisense	KNOWN	RP11-80H5.2	2	4	-0.065650
chr10	89646289	89650822	89648555	ENSG00000225836.1	-	lincRNA	KNOWN	RP11-80H5.6	1	2	-0.048876
chr10	89667181	89699671	89683426	ENSG00000235100.3	-	lincRNA	KNOWN	RP11-80H5.9	1	3	0.021437
chr10	89694295	89697928	89696111	ENSG00000240996.1	-	lincRNA	KNOWN	RP11-80H5.7	1	2	-0.155389
chr10	89701610	89774939	89738274	ENSG00000138182.14	+	protein_coding	KNOWN	KIF20B	4	33	-0.405978
chr10	89829510	89840861	89835185	ENSG00000232229.5	+	lincRNA	KNOWN	LINC00865	2	4	-0.518928
chr10	89837612	89839334	89838473	ENSG00000270670.1	-	processed_pseudogene	KNOWN	RP11-248C1.3	1	1	-0.529497
chr10	89853906	89914948	89884427	ENSG00000280560.1	+	lincRNA	KNOWN	LINC01374	1	2	-0.500244
chr10	89915489	89957373	89936431	ENSG00000226159.1	-	lincRNA	KNOWN	LINC01375	1	4	-0.359472
chr10	89978717	89979070	89978893	ENSG00000228938.3	+	processed_pseudogene	KNOWN	SNRPD2P1	1	1	-0.696504
chr10	90086269	90086336	90086302	ENSG00000274223.1	+	miRNA	NOVEL	AL139340.1	1	1	-0.674336
chr10	90163651	90163960	90163805	ENSG00000222451.1	-	misc_RNA	KNOWN	RN7SKP143	1	1	-0.496694
chr10	90402521	90540805	90471663	ENSG00000236373.1	-	lincRNA	KNOWN	RP11-15K3.1	1	7	-0.542233
chr10	90454170	90502968	90478569	ENSG00000224750.6	+	lincRNA	KNOWN	RP11-94M14.2	3	4	-0.481676
chr10	90462717	90467952	90465334	ENSG00000238291.1	+	lincRNA	KNOWN	RP11-94M14.3	1	3	-0.360520
chr10	90622143	90623611	90622877	ENSG00000283053.1	-	lincRNA	KNOWN	RP11-30G13.1	1	1	-0.338643
chr10	90740823	90857698	90799260	ENSG00000148680.15	-	protein_coding	KNOWN	HTR7	3	4	-0.358600
chr10	90871716	90908553	90890134	ENSG00000148688.13	+	protein_coding	KNOWN	RPP30	10	13	-0.248806
chr10	90880040	90880179	90880109	ENSG00000222305.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.236241
chr10	90912096	90921276	90916686	ENSG00000148677.6	-	protein_coding	KNOWN	ANKRD1	1	9	0.075782
chr10	90922731	90922835	90922783	ENSG00000201604.1	-	snRNA	KNOWN	RNU6-740P	1	1	0.075782
chr10	90994620	91006390	91000505	ENSG00000225519.1	+	lincRNA	KNOWN	RP11-236B18.2	1	2	-0.196634
chr10	90997480	90997713	90997596	ENSG00000273124.1	-	lincRNA	KNOWN	RP11-236B18.5	1	1	-0.196634
chr10	91047166	91062159	91054662	ENSG00000224851.1	+	lincRNA	KNOWN	LINC00502	1	3	-0.241397
chr10	91053051	91055047	91054049	ENSG00000220585.4	+	processed_pseudogene	KNOWN	DDX18P6	1	1	-0.323046
chr10	91152605	91153349	91152977	ENSG00000234043.3	-	processed_pseudogene	KNOWN	RP11-56M3.1	1	1	-0.189779
chr10	91163012	91284331	91223671	ENSG00000180628.14	+	protein_coding	KNOWN	PCGF5	5	10	-0.212269
chr10	91409280	91514829	91462054	ENSG00000165338.16	+	protein_coding	KNOWN	HECTD2	6	22	-0.201302
chr10	91464578	91464708	91464643	ENSG00000271385.1	-	processed_pseudogene	KNOWN	RP11-108M11.3	1	1	-0.309822
chr10	91544852	91545098	91544975	ENSG00000223876.1	+	processed_pseudogene	KNOWN	RPS27P1	1	1	0.145010
chr10	91628442	91633054	91630748	ENSG00000119938.8	-	protein_coding	KNOWN	PPP1R3C	1	2	0.217509
chr10	91666780	91667782	91667281	ENSG00000213449.2	-	processed_pseudogene	KNOWN	GAPDHP28	1	1	0.192686
chr10	91765899	91767196	91766547	ENSG00000228759.1	-	processed_pseudogene	KNOWN	FAF2P1	1	1	-0.279977
chr10	91782839	91798291	91790565	ENSG00000228701.1	-	antisense	KNOWN	TNKS2-AS1	2	2	-0.110557
chr10	91798312	91865276	91831794	ENSG00000107854.5	+	protein_coding	KNOWN	TNKS2	1	27	-0.093838
chr10	91807179	91807439	91807309	ENSG00000180581.7	-	processed_pseudogene	KNOWN	SRP9P1	1	1	-0.000574
chr10	91896704	91896897	91896800	ENSG00000273497.1	+	unprocessed_pseudogene	KNOWN	RP11-402D21.3	1	1	0.137795
chr10	91906589	91909483	91908036	ENSG00000174721.9	-	protein_coding	KNOWN	FGFBP3	1	2	0.137795
chr10	91908131	91909348	91908739	ENSG00000272817.1	+	antisense	KNOWN	RP11-402D21.2	1	2	0.137795
chr10	91923769	92030325	91977047	ENSG00000095564.13	+	protein_coding	KNOWN	BTAF1	4	38	0.029649
chr10	92046692	92291087	92168889	ENSG00000107864.14	-	protein_coding	KNOWN	CPEB3	3	10	0.051947
chr10	92076242	92076365	92076303	ENSG00000252993.1	+	snoRNA	NOVEL	SNORA25	1	1	-0.311587
chr10	92118664	92119164	92118914	ENSG00000214549.2	+	processed_pseudogene	KNOWN	SDHCP2	1	1	0.117083
chr10	92136875	92138370	92137622	ENSG00000213484.2	+	processed_pseudogene	KNOWN	EIF4A1P8	1	2	0.117083
chr10	92159572	92159672	92159622	ENSG00000264076.1	+	miRNA	NOVEL	AL158040.1	1	1	-0.050027
chr10	92204229	92204306	92204267	ENSG00000221042.1	-	ribozyme	NOVEL	CPEB3_ribozyme	1	1	-0.096865
chr10	92216332	92216793	92216562	ENSG00000105988.6	+	processed_pseudogene	KNOWN	NHP2P1	1	1	0.455583
chr10	92272147	92272250	92272198	ENSG00000199881.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.036344
chr10	92291163	92353964	92322563	ENSG00000198060.9	+	protein_coding	KNOWN	MARCH5	4	6	0.061685
chr10	92334463	92334564	92334513	ENSG00000202297.1	+	misc_RNA	KNOWN	RNY3P12	1	1	-0.123176
chr10	92418667	92420875	92419771	ENSG00000232709.1	+	processed_pseudogene	KNOWN	MARK2P9	1	2	0.177108
chr10	92441211	92441304	92441257	ENSG00000207895.1	-	miRNA	NOVEL	AL161652.1	1	1	0.091992
chr10	92451684	92574076	92512880	ENSG00000119912.15	-	protein_coding	KNOWN	IDE	8	25	0.098246
chr10	92593286	92655395	92624340	ENSG00000138160.5	+	protein_coding	KNOWN	KIF11	1	22	0.254322
chr10	92596852	92597287	92597069	ENSG00000184111.6	-	processed_pseudogene	KNOWN	RP11-366I13.3	1	1	0.492232
chr10	92659044	92659302	92659173	ENSG00000264313.2	+	misc_RNA	KNOWN	RN7SL644P	1	1	0.047869
chr10	92668745	92669743	92669244	ENSG00000236493.2	-	processed_pseudogene	KNOWN	EIF2S2P3	1	1	0.047869
chr10	92689951	92695646	92692798	ENSG00000152804.10	+	protein_coding	KNOWN	HHEX	4	4	0.037713
chr10	92710499	92710608	92710553	ENSG00000201412.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.106422
chr10	92834713	93059493	92947103	ENSG00000138190.16	+	protein_coding	KNOWN	EXOC6	7	22	-0.115257
chr10	92878092	92878289	92878190	ENSG00000225118.1	-	processed_pseudogene	KNOWN	RP11-477L16.2	1	1	-0.276547
chr10	93059663	93060426	93060044	ENSG00000226425.1	-	antisense	KNOWN	RP11-348J12.2	1	2	-0.283517
chr10	93060808	93069536	93065172	ENSG00000187553.8	+	protein_coding	KNOWN	CYP26C1	2	6	-0.283517
chr10	93071972	93073466	93072719	ENSG00000279607.1	+	lincRNA	KNOWN	RP11-348J12.5	1	2	0.676954
chr10	93073475	93077890	93075682	ENSG00000095596.11	+	protein_coding	KNOWN	CYP26A1	6	7	0.676954
chr10	93106872	93107383	93107127	ENSG00000232805.1	-	processed_pseudogene	KNOWN	NIP7P1	1	1	-0.115521
chr10	93206857	93209627	93208242	ENSG00000237417.1	-	processed_pseudogene	KNOWN	XRCC6P1	1	4	0.091992
chr10	93284004	93284558	93284281	ENSG00000213432.2	-	processed_pseudogene	KNOWN	RP11-624L12.1	1	1	0.249533
chr10	93306429	93482317	93394373	ENSG00000138119.16	-	protein_coding	KNOWN	MYOF	9	54	0.442718
chr10	93496632	93529092	93512862	ENSG00000138180.15	+	protein_coding	KNOWN	CEP55	3	9	0.134557
chr10	93510548	93510680	93510614	ENSG00000212396.1	-	rRNA	KNOWN	RNA5SP323	1	1	-0.030691
chr10	93566665	93604480	93585572	ENSG00000186188.10	+	protein_coding	KNOWN	FFAR4	3	4	0.041767
chr10	93591687	93601744	93596715	ENSG00000138207.12	-	protein_coding	KNOWN	RBP4	5	8	-0.057018
chr10	93608586	93608699	93608642	ENSG00000221352.1	+	miRNA	NOVEL	AL356214.1	1	1	-0.057018
chr10	93612588	93666010	93639299	ENSG00000095464.9	+	protein_coding	KNOWN	PDE6C	2	22	0.033504
chr10	93667883	93702572	93685227	ENSG00000148690.11	-	protein_coding	KNOWN	FRA10AC1	6	14	-0.422567
chr10	93757809	93798174	93777991	ENSG00000108231.11	+	protein_coding	KNOWN	LGI1	14	8	-0.066909
chr10	93762453	93771991	93767222	ENSG00000280660.1	+	sense_intronic	KNOWN	RP11-437J2.3	1	2	-0.028260
chr10	93772681	93788605	93780643	ENSG00000280485.1	-	antisense	KNOWN	RP11-437J2.4	1	4	0.018463
chr10	93881293	93881938	93881615	ENSG00000227995.1	-	processed_pseudogene	KNOWN	RAB11AP1	1	1	-0.080845
chr10	93893973	93956062	93925017	ENSG00000176273.14	+	protein_coding	KNOWN	SLC35G1	6	5	-0.193154
chr10	93958191	93961540	93959865	ENSG00000180764.13	-	transcribed_processed_pseudogene	KNOWN	PIPSL	2	1	-0.126648
chr10	93975258	93975349	93975303	ENSG00000274289.1	+	miRNA	NOVEL	AL365510.1	1	1	-0.086345
chr10	93993989	94332823	94163406	ENSG00000138193.14	+	protein_coding	KNOWN	PLCE1	5	33	0.021021
chr10	94081950	94108814	94095382	ENSG00000232913.7	-	antisense	KNOWN	PLCE1-AS2	13	8	-0.037604
chr10	94109116	94121107	94115111	ENSG00000231575.1	+	sense_intronic	KNOWN	RP11-162K11.4	1	2	0.075197
chr10	94137748	94139500	94138624	ENSG00000234724.1	+	processed_pseudogene	KNOWN	HDAC1P1	1	2	0.012425
chr10	94155639	94155745	94155692	ENSG00000206631.1	-	snRNA	KNOWN	RNU6-657P	1	1	-0.089074
chr10	94225160	94227288	94226224	ENSG00000228553.1	-	antisense	KNOWN	RP11-391J2.3	1	2	0.084574
chr10	94279277	94287478	94283377	ENSG00000268894.6	-	antisense	KNOWN	PLCE1-AS1	4	4	-0.236957
chr10	94314907	94315327	94315117	ENSG00000273450.1	-	antisense	KNOWN	RP11-76P2.4	1	1	0.247111
chr10	94333226	94362959	94348092	ENSG00000173145.11	-	protein_coding	KNOWN	NOC3L	3	21	-0.139741
chr10	94402504	94535930	94469217	ENSG00000108239.8	+	protein_coding	KNOWN	TBC1D12	3	13	-0.205031
chr10	94501434	94613905	94557669	ENSG00000119969.14	+	protein_coding	KNOWN	HELLS	12	23	-0.239187
chr10	94577439	94611238	94594338	ENSG00000244332.1	+	sense_overlapping	KNOWN	RP11-119K6.6	1	2	-0.302904
chr10	94646364	94647996	94647180	ENSG00000235746.1	-	processed_pseudogene	KNOWN	CTBP2P2	1	2	-0.489179
chr10	94683621	94736190	94709905	ENSG00000108242.12	+	protein_coding	KNOWN	CYP2C18	2	9	-0.595118
chr10	94688154	94853073	94770613	ENSG00000276490.1	+	protein_coding	KNOWN	RP11-400G3.5	1	14	-0.465054
chr10	94762624	94853260	94807942	ENSG00000165841.9	+	protein_coding	KNOWN	CYP2C19	2	9	-0.399954
chr10	94774156	94774633	94774394	ENSG00000230338.1	-	processed_pseudogene	KNOWN	MTND4P19	1	1	-0.573825
chr10	94865852	94873129	94869490	ENSG00000235199.1	-	processed_pseudogene	KNOWN	CYP2C58P	1	3	-0.314585
chr10	94882554	94883343	94882948	ENSG00000225354.1	+	processed_pseudogene	KNOWN	RP11-400G3.3	1	1	-0.426737
chr10	94938658	94989390	94964024	ENSG00000138109.9	+	protein_coding	KNOWN	CYP2C9	3	9	-0.608756
chr10	94940253	94941121	94940687	ENSG00000233377.1	-	processed_pseudogene	KNOWN	MTND4P20	1	1	-0.519938
chr10	95007126	95007556	95007341	ENSG00000228460.1	-	unprocessed_pseudogene	KNOWN	CYP2C59P	1	2	-0.577184
chr10	95009674	95009812	95009743	ENSG00000260863.1	+	unprocessed_pseudogene	KNOWN	CYP2C60P	1	1	-0.577184
chr10	95031640	95032048	95031844	ENSG00000237885.1	+	processed_pseudogene	KNOWN	RP11-208C17.4	1	1	-0.603470
chr10	95036772	95069497	95053134	ENSG00000138115.13	-	protein_coding	KNOWN	CYP2C8	13	10	-0.517407
chr10	95141925	95168425	95155175	ENSG00000231829.2	-	lincRNA	KNOWN	RP11-310E22.5	1	5	-0.530728
chr10	95173085	95173187	95173136	ENSG00000274691.1	-	unprocessed_pseudogene	KNOWN	RP11-310E22.6	1	1	-0.030264
chr10	95183653	95184217	95183935	ENSG00000225533.1	+	processed_pseudogene	KNOWN	PAWRP1	1	1	-0.030264
chr10	95194200	95228928	95211564	ENSG00000173124.14	+	protein_coding	KNOWN	ACSM6	4	11	-0.087922
chr10	95228243	95231144	95229693	ENSG00000234026.1	-	antisense	KNOWN	RP11-310E22.4	1	2	0.051219
chr10	95237572	95291024	95264298	ENSG00000107438.8	-	protein_coding	KNOWN	PDLIM1	5	7	0.092067
chr10	95311771	95561414	95436592	ENSG00000095637.21	-	protein_coding	KNOWN	SORBS1	20	33	-0.109570
chr10	95594598	95595372	95594985	ENSG00000214362.2	+	processed_pseudogene	KNOWN	RP11-7D5.2	1	1	-0.220221
chr10	95605929	95656706	95631317	ENSG00000059573.8	-	protein_coding	KNOWN	ALDH18A1	5	18	0.048565
chr10	95663396	95694143	95678769	ENSG00000119977.20	-	protein_coding	KNOWN	TCTN3	7	14	-0.168818
chr10	95711779	95869695	95790737	ENSG00000138185.17	+	protein_coding	KNOWN	ENTPD1	12	10	-0.335609
chr10	95753206	96090238	95921722	ENSG00000226688.6	-	antisense	KNOWN	ENTPD1-AS1	12	6	-0.345879
chr10	95833508	95873758	95853633	ENSG00000240527.1	+	sense_intronic	KNOWN	RP11-429G19.3	1	2	-0.321930
chr10	95844477	95866383	95855430	ENSG00000282889.1	+	protein_coding	KNOWN	AL365273.1	1	6	-0.319042
chr10	95860548	95924844	95892696	ENSG00000270099.1	+	protein_coding	KNOWN	RP11-248J23.7	1	7	-0.289099
chr10	95907603	95938723	95923163	ENSG00000173088.12	+	protein_coding	KNOWN	C10orf131	3	8	-0.450026
chr10	95949968	95996252	95973110	ENSG00000269948.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-248J23.6	3	12	-0.419594
chr10	95974029	96032675	96003352	ENSG00000269920.1	+	lincRNA	KNOWN	RP11-690P14.4	1	14	-0.476170
chr10	95999778	96000243	96000010	ENSG00000227805.1	-	processed_pseudogene	KNOWN	RP11-248J23.5	1	1	-0.603855
chr10	96000091	96032684	96016387	ENSG00000188649.11	+	protein_coding	KNOWN	CC2D2B	3	12	-0.515457
chr10	96043394	96060870	96052132	ENSG00000107443.15	+	protein_coding	KNOWN	CCNJ	3	6	-0.266416
chr10	96064315	96064399	96064357	ENSG00000266407.1	-	miRNA	KNOWN	MIR3157	1	1	-0.265269
chr10	96112747	96112851	96112799	ENSG00000200728.1	+	snRNA	KNOWN	RNU6-271P	1	1	-0.616959
chr10	96128392	96128452	96128422	ENSG00000278748.1	+	miRNA	NOVEL	AC021037.2	1	1	-0.616959
chr10	96129715	96205288	96167501	ENSG00000177853.14	+	protein_coding	KNOWN	ZNF518A	10	6	-0.553504
chr10	96130031	96130117	96130074	ENSG00000273577.1	+	miRNA	NOVEL	AC021037.1	1	1	-0.598680
chr10	96189366	96190219	96189792	ENSG00000229417.1	-	processed_pseudogene	KNOWN	NPM1P25	1	1	-0.733587
chr10	96191702	96271587	96231644	ENSG00000095585.16	-	protein_coding	KNOWN	BLNK	9	17	-0.235379
chr10	96292685	96306695	96299690	ENSG00000229418.2	-	antisense	KNOWN	RP11-35J23.1	1	4	-0.138306
chr10	96304396	96338564	96321480	ENSG00000107447.7	+	protein_coding	KNOWN	DNTT	2	11	-0.087639
chr10	96343216	96359365	96351290	ENSG00000197430.10	-	protein_coding	KNOWN	OPALIN	6	6	-0.071626
chr10	96364606	96513918	96439262	ENSG00000095587.8	-	protein_coding	KNOWN	TLL2	3	21	0.028210
chr10	96518109	96587452	96552780	ENSG00000077147.14	-	protein_coding	KNOWN	TM9SF3	6	15	-0.233011
chr10	96560185	96560922	96560553	ENSG00000235677.1	+	processed_pseudogene	KNOWN	NPM1P26	1	1	-0.198458
chr10	96593312	96720514	96656913	ENSG00000155629.14	-	protein_coding	KNOWN	PIK3AP1	6	17	0.024910
chr10	96619376	96619483	96619429	ENSG00000202047.1	+	rRNA	KNOWN	RNA5SP324	1	1	0.091992
chr10	96620877	96621707	96621292	ENSG00000227032.1	-	processed_pseudogene	KNOWN	RP11-34E5.4	1	1	0.091992
chr10	96743167	96743273	96743220	ENSG00000207287.1	+	snRNA	KNOWN	RNU6-1274P	1	1	0.032403
chr10	96750288	96750899	96750593	ENSG00000236552.2	+	processed_pseudogene	KNOWN	RPL13AP5	1	1	0.142618
chr10	96828669	96828764	96828716	ENSG00000207976.1	-	miRNA	KNOWN	MIR607	1	1	-0.100653
chr10	96832260	96981043	96906651	ENSG00000196233.11	+	protein_coding	KNOWN	LCOR	8	9	0.008232
chr10	96915633	96915902	96915767	ENSG00000232875.1	-	processed_pseudogene	KNOWN	HMGN2P35	1	1	-0.109215
chr10	96981284	96986212	96983748	ENSG00000155640.6	+	protein_coding	KNOWN	C10orf12	1	1	-0.182765
chr10	96992450	96995959	96994204	ENSG00000231025.1	+	antisense	KNOWN	RP11-175O19.4	1	1	0.185968
chr10	96998038	97185920	97091979	ENSG00000187122.16	-	protein_coding	KNOWN	SLIT1	7	37	0.209973
chr10	97102756	97103747	97103251	ENSG00000234855.1	+	antisense	KNOWN	SLIT1-AS1	1	3	0.267489
chr10	97153045	97292637	97222841	ENSG00000269891.2	-	protein_coding	KNOWN	ARHGAP19-SLIT1	2	15	0.143006
chr10	97222173	97292673	97257423	ENSG00000213390.10	-	protein_coding	KNOWN	ARHGAP19	7	13	0.237856
chr10	97275012	97278097	97276554	ENSG00000231398.1	+	processed_pseudogene	KNOWN	RP11-375N9.2	1	3	0.228728
chr10	97297290	97297557	97297423	ENSG00000277308.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.289224
chr10	97309138	97309958	97309548	ENSG00000237169.1	-	processed_pseudogene	KNOWN	RPL12P27	1	2	0.289224
chr10	97319267	97321915	97320591	ENSG00000165879.8	+	protein_coding	KNOWN	FRAT1	2	2	0.405150
chr10	97332497	97334709	97333603	ENSG00000181274.6	-	protein_coding	KNOWN	FRAT2	1	1	0.578731
chr10	97334564	97343203	97338883	ENSG00000225850.3	+	antisense	KNOWN	RP11-452K12.4	1	2	0.578731
chr10	97356358	97426076	97391217	ENSG00000052749.13	-	protein_coding	KNOWN	RRP12	15	35	0.505281
chr10	97393197	97393547	97393372	ENSG00000231508.1	-	processed_pseudogene	KNOWN	RP11-452K12.6	1	1	0.425822
chr10	97401115	97419524	97410319	ENSG00000231970.1	+	antisense	KNOWN	RP11-452K12.7	1	2	0.536619
chr10	97421195	97421307	97421251	ENSG00000200737.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.639960
chr10	97426160	97433441	97429800	ENSG00000171314.8	+	protein_coding	KNOWN	PGAM1	3	4	0.721541
chr10	97436142	97446017	97441079	ENSG00000171311.12	-	protein_coding	KNOWN	EXOSC1	11	9	0.812532
chr10	97446131	97457370	97451750	ENSG00000171307.18	+	protein_coding	KNOWN	ZDHHC16	18	12	0.710785
chr10	97458324	97498794	97478559	ENSG00000155229.20	-	protein_coding	KNOWN	MMS19	19	32	0.666067
chr10	97482669	97482773	97482721	ENSG00000264677.1	+	miRNA	NOVEL	AL355490.1	1	1	0.699946
chr10	97498868	97571209	97535038	ENSG00000165886.4	+	protein_coding	KNOWN	UBTD1	1	3	0.689400
chr10	97572499	97583884	97578191	ENSG00000165887.11	+	protein_coding	KNOWN	ANKRD2	4	9	0.656655
chr10	97584323	97612802	97598562	ENSG00000241935.8	+	protein_coding	KNOWN	HOGA1	4	7	0.363994
chr10	97584374	97673910	97629142	ENSG00000249967.1	+	protein_coding	KNOWN	RP11-548K23.11	1	10	0.363303
chr10	97589727	97590934	97590330	ENSG00000203942.4	+	protein_coding	KNOWN	C10orf62	1	1	0.363472
chr10	97614553	97633500	97624026	ENSG00000171160.17	-	protein_coding	KNOWN	MORN4	3	5	0.390832
chr10	97640686	97676434	97658560	ENSG00000155252.13	+	protein_coding	KNOWN	PI4K2A	1	9	0.340020
chr10	97677424	97687323	97682373	ENSG00000119986.6	-	protein_coding	KNOWN	AVPI1	1	3	0.424796
chr10	97713173	97718152	97715662	ENSG00000155254.12	+	protein_coding	KNOWN	MARVELD1	4	4	0.366025
chr10	97737121	97760907	97749014	ENSG00000155256.17	+	protein_coding	KNOWN	ZFYVE27	11	13	0.435006
chr10	97766751	97771952	97769351	ENSG00000120057.4	-	protein_coding	KNOWN	SFRP5	1	3	0.413643
chr10	97828478	97849798	97839138	ENSG00000227356.2	-	lincRNA	KNOWN	LINC00866	1	3	0.473852
chr10	97850239	97871580	97860909	ENSG00000155265.10	+	protein_coding	KNOWN	GOLGA7B	3	5	0.172905
chr10	97865000	98030828	97947914	ENSG00000095713.13	-	protein_coding	KNOWN	CRTAC1	6	15	0.083998
chr10	97875812	97875897	97875854	ENSG00000265398.1	-	miRNA	NOVEL	AL139239.1	1	1	0.274856
chr10	98076361	98076421	98076391	ENSG00000278752.1	-	misc_RNA	NOVEL	KCNQ1DN	1	1	-0.376053
chr10	98134624	98244897	98189760	ENSG00000166024.13	+	protein_coding	KNOWN	R3HCC1L	6	10	-0.106770
chr10	98247690	98268250	98257970	ENSG00000138131.3	-	protein_coding	KNOWN	LOXL4	1	15	0.480930
chr10	98252023	98256575	98254299	ENSG00000230928.1	+	antisense	KNOWN	RP11-34A14.3	1	2	0.525790
chr10	98383565	98415184	98399374	ENSG00000119943.10	-	protein_coding	KNOWN	PYROXD2	5	16	0.486705
chr10	98395218	98395307	98395262	ENSG00000221419.1	-	miRNA	KNOWN	MIR1287	1	1	0.493888
chr10	98416198	98446947	98431572	ENSG00000107521.18	-	protein_coding	KNOWN	HPS1	15	20	0.224848
chr10	98431292	98431360	98431326	ENSG00000264610.1	-	miRNA	KNOWN	MIR4685	1	1	0.054711
chr10	98457077	99235862	98846469	ENSG00000172987.12	-	protein_coding	KNOWN	HPSE2	6	13	-0.289678
chr10	98924499	98924568	98924533	ENSG00000274056.1	-	miRNA	KNOWN	MIR6507	1	1	-0.401997
chr10	99013103	99013952	99013527	ENSG00000236818.1	-	processed_pseudogene	KNOWN	ARL5AP2	1	2	-0.314633
chr10	99047639	99048319	99047979	ENSG00000234109.1	+	processed_pseudogene	KNOWN	RPL7P36	1	1	-0.398147
chr10	99329099	99394330	99361714	ENSG00000119946.10	+	protein_coding	KNOWN	CNNM1	2	11	0.173077
chr10	99396870	99430624	99413747	ENSG00000120053.10	-	protein_coding	KNOWN	GOT1	3	9	0.263649
chr10	99431191	99438117	99434654	ENSG00000224934.2	+	lincRNA	KNOWN	RP11-441O15.3	1	4	-0.147679
chr10	99502665	99502707	99502686	ENSG00000281581.1	+	snRNA	NOVEL	U7	1	1	-0.082404
chr10	99526350	99531177	99528763	ENSG00000257582.5	-	lincRNA	KNOWN	LINC01475	2	5	0.100863
chr10	99527081	99528261	99527671	ENSG00000228778.1	+	lincRNA	KNOWN	RP11-129J12.1	1	2	-0.040112
chr10	99532933	99536524	99534728	ENSG00000119919.10	+	protein_coding	KNOWN	NKX2-3	2	3	0.537551
chr10	99610522	99620609	99615565	ENSG00000155287.10	-	protein_coding	KNOWN	SLC25A28	4	4	-0.084259
chr10	99621055	99621918	99621486	ENSG00000260475.1	+	lincRNA	KNOWN	RP11-85A1.3	1	1	-0.084259
chr10	99651989	99653905	99652947	ENSG00000229278.1	-	antisense	KNOWN	RP11-483F11.7	1	2	-0.017831
chr10	99659506	99706240	99682873	ENSG00000198018.6	+	protein_coding	KNOWN	ENTPD7	2	13	0.098719
chr10	99697407	99697949	99697678	ENSG00000233690.1	-	processed_pseudogene	KNOWN	EBAG9P1	1	1	0.141460
chr10	99702558	99756134	99729346	ENSG00000119929.12	+	protein_coding	KNOWN	CUTC	4	9	0.003238
chr10	99711844	99732100	99721972	ENSG00000014919.12	-	protein_coding	KNOWN	COX15	3	9	0.054937
chr10	99782732	99852192	99817462	ENSG00000023839.10	+	protein_coding	KNOWN	ABCC2	3	32	0.262769
chr10	99788564	99789410	99788987	ENSG00000227351.2	-	processed_pseudogene	KNOWN	NANOGP6	1	1	0.083909
chr10	99875577	100009919	99942748	ENSG00000107554.15	-	protein_coding	KNOWN	DNMBP	4	17	0.357086
chr10	99927010	99958381	99942695	ENSG00000227695.5	+	antisense	KNOWN	DNMBP-AS1	2	5	0.188070
chr10	100042193	100081877	100062035	ENSG00000120054.11	-	protein_coding	KNOWN	CPN1	2	9	0.016154
chr10	100114417	100115223	100114820	ENSG00000232230.1	-	processed_pseudogene	KNOWN	TPM4P1	1	1	0.191002
chr10	100143065	100143995	100143530	ENSG00000270623.1	-	processed_pseudogene	KNOWN	RP11-316M21.9	1	2	-0.005856
chr10	100150094	100188334	100169214	ENSG00000107566.13	-	protein_coding	KNOWN	ERLIN1	3	12	0.088310
chr10	100188298	100229619	100208958	ENSG00000213341.10	-	protein_coding	KNOWN	CHUK	4	21	0.053669
chr10	100190036	100190747	100190391	ENSG00000236308.1	+	antisense	KNOWN	RP11-316M21.7	1	2	0.052463
chr10	100229667	100234000	100231833	ENSG00000227492.1	+	antisense	KNOWN	RP11-316M21.6	1	5	0.278645
chr10	100232298	100267680	100249989	ENSG00000095485.16	-	protein_coding	KNOWN	CWF19L1	9	14	0.204767
chr10	100237156	100237302	100237229	ENSG00000212464.1	-	snoRNA	KNOWN	SNORA12	1	1	0.295525
chr10	100248271	100249095	100248683	ENSG00000230224.1	+	processed_pseudogene	KNOWN	PHBP9	1	1	0.295525
chr10	100258571	100258677	100258624	ENSG00000207362.1	+	snRNA	KNOWN	RNU6-422P	1	1	0.113907
chr10	100273280	100286712	100279996	ENSG00000196072.11	-	protein_coding	KNOWN	BLOC1S2	6	5	0.355026
chr10	100288154	100330486	100309320	ENSG00000107593.16	-	protein_coding	KNOWN	PKD2L1	4	16	0.348303
chr10	100335563	100346390	100340976	ENSG00000231188.1	-	antisense	KNOWN	RP11-34D15.2	1	4	0.107178
chr10	100347124	100364834	100355979	ENSG00000099194.5	+	protein_coding	KNOWN	SCD	1	6	0.486192
chr10	100373615	100383368	100378491	ENSG00000235823.1	+	lincRNA	KNOWN	OLMALINC	1	2	0.230890
chr10	100398352	100398446	100398399	ENSG00000212325.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.310764
chr10	100412934	100413421	100413177	ENSG00000273030.1	+	lincRNA	KNOWN	RP11-285F16.1	1	1	0.077119
chr10	100463041	100483744	100473392	ENSG00000075290.7	+	protein_coding	KNOWN	WNT8B	1	6	0.020458
chr10	100486642	100519864	100503253	ENSG00000075826.16	-	protein_coding	KNOWN	SEC31B	13	26	0.546646
chr10	100505628	100529881	100517754	ENSG00000255339.6	-	protein_coding	KNOWN	RP11-411B6.6	5	12	0.429039
chr10	100523740	100530000	100526870	ENSG00000166136.15	-	protein_coding	KNOWN	NDUFB8	9	5	0.364772
chr10	100529072	100559998	100544535	ENSG00000166135.13	+	protein_coding	KNOWN	HIF1AN	5	8	0.455932
chr10	100666695	100667009	100666852	ENSG00000274660.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.413920
chr10	100735603	100829941	100782772	ENSG00000075891.21	+	protein_coding	KNOWN	PAX2	9	11	0.431694
chr10	100907174	100907280	100907227	ENSG00000222072.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.638559
chr10	100911103	100912739	100911921	ENSG00000272572.1	-	antisense	KNOWN	RP11-179B2.2	1	1	0.290158
chr10	100912569	100965136	100938852	ENSG00000119906.11	+	protein_coding	KNOWN	SLF2	5	20	0.236749
chr10	100967688	100968135	100967911	ENSG00000273476.1	+	lincRNA	KNOWN	RP11-108L7.14	1	1	0.480689
chr10	100969458	100987515	100978486	ENSG00000055950.16	-	protein_coding	KNOWN	MRPL43	14	6	0.537199
chr10	100969518	100985871	100977694	ENSG00000095539.15	+	protein_coding	KNOWN	SEMA4G	12	16	0.537231
chr10	100974985	100975084	100975034	ENSG00000207551.1	+	miRNA	KNOWN	MIR608	1	1	0.538944
chr10	100980507	100985614	100983060	ENSG00000236662.1	-	antisense	KNOWN	RP11-108L7.4	1	2	0.538944
chr10	100987367	100994401	100990884	ENSG00000107815.7	+	protein_coding	KNOWN	C10orf2	5	5	0.926922
chr10	100996618	101007836	101002227	ENSG00000107816.17	+	protein_coding	KNOWN	LZTS2	7	5	1.158898
chr10	101007683	101031157	101019420	ENSG00000186862.17	-	protein_coding	KNOWN	PDZD7	6	17	1.261718
chr10	101031234	101041244	101036239	ENSG00000107819.13	+	protein_coding	KNOWN	SFXN3	7	12	0.953664
chr10	101060029	101061005	101060517	ENSG00000273162.1	-	lincRNA	KNOWN	RP11-108L7.15	1	1	0.690629
chr10	101061841	101068131	101064986	ENSG00000107821.14	+	protein_coding	KNOWN	KAZALD1	6	5	0.690629
chr10	101089321	101131126	101110223	ENSG00000236311.6	-	processed_transcript	KNOWN	TLX1NB	2	3	0.602664
chr10	101130505	101137789	101134147	ENSG00000107807.12	+	protein_coding	KNOWN	TLX1	5	3	0.790611
chr10	101176323	101194147	101185235	ENSG00000237579.2	+	lincRNA	KNOWN	LINC01514	1	6	0.296324
chr10	101181144	101181951	101181547	ENSG00000270973.1	-	processed_pseudogene	KNOWN	SMARCE1P7	1	2	0.269450
chr10	101226195	101229794	101227994	ENSG00000138136.6	-	protein_coding	KNOWN	LBX1	1	2	0.787137
chr10	101229594	101270148	101249871	ENSG00000227128.4	+	processed_transcript	KNOWN	LBX1-AS1	6	3	0.521306
chr10	101252821	101263550	101258185	ENSG00000229649.1	-	lincRNA	KNOWN	RP11-107I14.4	1	3	0.432221
chr10	101307529	101307718	101307623	ENSG00000222238.1	+	snRNA	KNOWN	RNU2-43P	1	1	0.555939
chr10	101311018	101311505	101311261	ENSG00000225208.1	+	lincRNA	KNOWN	RP11-107I14.2	1	2	0.382120
chr10	101322485	101323394	101322939	ENSG00000230967.2	-	lincRNA	KNOWN	RP11-107I14.5	1	3	0.382120
chr10	101354033	101557321	101455677	ENSG00000166167.17	+	protein_coding	KNOWN	BTRC	7	15	0.075220
chr10	101364845	101365035	101364940	ENSG00000222414.1	-	snRNA	KNOWN	RNU2-59P	1	1	0.373623
chr10	101570560	101609668	101590114	ENSG00000166171.12	+	protein_coding	KNOWN	DPCD	6	7	0.668191
chr10	101578882	101588270	101583576	ENSG00000166169.16	-	protein_coding	KNOWN	POLL	17	9	0.736804
chr10	101601417	101601497	101601457	ENSG00000263436.1	+	miRNA	KNOWN	MIR3158-2	1	1	0.600380
chr10	101610664	101695295	101652979	ENSG00000107829.13	-	protein_coding	KNOWN	FBXW4	5	9	0.543972
chr10	101622859	101622965	101622912	ENSG00000222051.1	+	snRNA	KNOWN	RNU6-1165P	1	1	0.699207
chr10	101704652	101708401	101706526	ENSG00000224817.1	-	lincRNA	KNOWN	RP11-190J1.3	1	2	0.116239
chr10	101770130	101780369	101775249	ENSG00000107831.12	-	protein_coding	KNOWN	FGF8	7	6	0.773916
chr10	101781325	101783413	101782369	ENSG00000107833.10	-	protein_coding	KNOWN	NPM3	4	6	0.773916
chr10	101784443	101818465	101801454	ENSG00000198408.13	-	protein_coding	KNOWN	MGEA5	11	16	0.536457
chr10	101819078	101828779	101823928	ENSG00000226009.1	+	antisense	KNOWN	KCNIP2-AS1	1	3	0.599288
chr10	101825974	101843920	101834947	ENSG00000120049.18	-	protein_coding	KNOWN	KCNIP2	13	11	0.837306
chr10	101845599	102056193	101950896	ENSG00000120029.12	-	protein_coding	KNOWN	C10orf76	5	26	0.387142
chr10	101902600	101902658	101902629	ENSG00000278628.1	-	miRNA	NOVEL	AL391827.1	1	1	0.160523
chr10	101912998	101913279	101913138	ENSG00000274742.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.016068
chr10	101952605	101952704	101952654	ENSG00000222430.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.260921
chr10	102065390	102068038	102066714	ENSG00000166189.7	+	protein_coding	KNOWN	HPS6	1	1	1.138913
chr10	102085476	102085730	102085603	ENSG00000224302.1	-	processed_pseudogene	KNOWN	RP11-302K17.3	1	1	1.072229
chr10	102089968	102090062	102090015	ENSG00000229629.1	+	processed_pseudogene	KNOWN	RP11-302K17.4	1	1	0.681262
chr10	102107560	102120453	102114006	ENSG00000198728.10	-	protein_coding	KNOWN	LDB1	4	11	1.122835
chr10	102132994	102150331	102141662	ENSG00000148840.10	+	protein_coding	KNOWN	PPRC1	6	14	0.942185
chr10	102152176	102163871	102158023	ENSG00000166197.16	+	protein_coding	KNOWN	NOLC1	9	13	1.211731
chr10	102226328	102229589	102227958	ENSG00000119915.4	+	protein_coding	KNOWN	ELOVL3	1	4	0.682807
chr10	102230186	102241474	102235830	ENSG00000107859.9	-	protein_coding	KNOWN	PITX3	2	4	0.740649
chr10	102245532	102382899	102314215	ENSG00000107862.4	+	protein_coding	KNOWN	GBF1	2	40	0.564732
chr10	102261230	102261306	102261268	ENSG00000251989.2	+	miRNA	NOVEL	AL160011.1	1	1	0.818615
chr10	102394110	102402529	102398319	ENSG00000077150.17	+	protein_coding	KNOWN	NFKB2	10	23	0.664310
chr10	102402617	102421539	102412078	ENSG00000059915.16	-	protein_coding	KNOWN	PSD	9	18	1.005066
chr10	102409042	102409102	102409072	ENSG00000275957.1	-	miRNA	NOVEL	AL121928.1	1	1	0.664310
chr10	102419189	102423136	102421162	ENSG00000107872.12	+	protein_coding	KNOWN	FBXL15	7	4	1.223044
chr10	102423245	102432661	102427953	ENSG00000107874.10	-	protein_coding	KNOWN	CUEDC2	4	9	1.191880
chr10	102436500	102436609	102436554	ENSG00000202569.3	+	miRNA	KNOWN	MIR146B	1	1	1.112810
chr10	102449817	102461106	102455461	ENSG00000269609.5	+	processed_transcript	KNOWN	RPARP-AS1	8	5	0.928758
chr10	102449837	102451543	102450690	ENSG00000120055.7	-	lincRNA	KNOWN	C10orf95	1	2	0.943506
chr10	102461395	102477045	102469220	ENSG00000138111.14	+	protein_coding	KNOWN	TMEM180	5	10	0.955778
chr10	102479229	102502711	102490970	ENSG00000138107.11	-	protein_coding	KNOWN	ACTR1A	6	11	0.752252
chr10	102483039	102483559	102483299	ENSG00000273262.1	+	antisense	KNOWN	RP11-18I14.11	1	1	0.992456
chr10	102503987	102633535	102568761	ENSG00000107882.11	+	protein_coding	KNOWN	SUFU	4	12	0.651849
chr10	102572757	102573225	102572991	ENSG00000228657.1	-	processed_pseudogene	KNOWN	RPL23AP58	1	1	0.574933
chr10	102591524	102591630	102591577	ENSG00000207029.1	+	snRNA	KNOWN	RNU6-43P	1	1	0.431129
chr10	102642792	102644140	102643466	ENSG00000272933.1	-	lincRNA	KNOWN	RP11-47A8.5	1	1	0.852416
chr10	102644496	102658407	102651451	ENSG00000171206.13	+	protein_coding	KNOWN	TRIM8	4	6	0.907128
chr10	102673731	102714407	102694069	ENSG00000138175.8	-	protein_coding	KNOWN	ARL3	1	6	0.507959
chr10	102714538	102743492	102729015	ENSG00000156398.12	+	protein_coding	KNOWN	SFXN2	13	12	0.575159
chr10	102743970	102816267	102780118	ENSG00000166272.16	+	protein_coding	KNOWN	WBP1L	2	4	0.577750
chr10	102803929	102804031	102803980	ENSG00000252994.1	+	snRNA	KNOWN	RNU6-1231P	1	1	0.614094
chr10	102830531	102837533	102834032	ENSG00000148795.5	-	protein_coding	KNOWN	CYP17A1	3	8	0.465967
chr10	102832721	102834516	102833618	ENSG00000203886.4	+	antisense	KNOWN	CYP17A1-AS1	1	2	0.465967
chr10	102838011	102845473	102841742	ENSG00000213061.2	-	processed_pseudogene	KNOWN	PFN1P11	1	2	0.465967
chr10	102845595	102845950	102845772	ENSG00000236937.2	+	processed_pseudogene	KNOWN	PTGES3P4	1	1	0.465967
chr10	102845761	102854513	102850137	ENSG00000282772.1	-	antisense	KNOWN	RP11-753C18.12	4	3	0.351481
chr10	102854223	102864961	102859592	ENSG00000166275.15	+	protein_coding	KNOWN	BORCS7	3	6	0.243995
chr10	102854272	102901899	102878085	ENSG00000270316.1	+	protein_coding	KNOWN	BORCS7-ASMT	1	15	0.274765
chr10	102869516	102901899	102885707	ENSG00000214435.7	+	protein_coding	KNOWN	AS3MT	2	13	0.289250
chr10	102887874	102888188	102888031	ENSG00000235266.1	-	processed_pseudogene	KNOWN	RP11-753C18.8	1	1	0.356448
chr10	102914585	102915404	102914994	ENSG00000272912.1	+	lincRNA	KNOWN	RP11-724N1.1	1	1	0.484309
chr10	102918293	103090221	103004257	ENSG00000148842.17	+	protein_coding	KNOWN	CNNM2	4	8	0.285293
chr10	103027336	103027498	103027417	ENSG00000278498.1	+	misc_RNA	NOVEL	uc_338	1	1	0.202416
chr10	103088017	103193306	103140661	ENSG00000076685.18	-	protein_coding	KNOWN	NT5C2	14	19	0.297544
chr10	103125017	103125416	103125216	ENSG00000237827.1	-	processed_pseudogene	KNOWN	RP11-332O19.2	1	1	0.100870
chr10	103165134	103165196	103165165	ENSG00000276694.1	-	miRNA	NOVEL	AL360001.1	1	1	0.435066
chr10	103175554	103176094	103175824	ENSG00000213277.3	+	processed_pseudogene	KNOWN	MARCKSL1P1	1	1	0.296191
chr10	103215709	103216800	103216254	ENSG00000229256.1	+	processed_pseudogene	KNOWN	ST13P13	1	1	0.507029
chr10	103245887	103248016	103246951	ENSG00000235376.5	+	protein_coding	KNOWN	RPEL1	1	1	0.312118
chr10	103277163	103290351	103283757	ENSG00000148798.9	+	protein_coding	KNOWN	INA	2	9	0.254979
chr10	103302796	103351134	103326965	ENSG00000156374.14	-	protein_coding	KNOWN	PCGF6	4	10	0.400956
chr10	103312436	103312568	103312502	ENSG00000212413.1	-	snRNA	KNOWN	RNU11-3P	1	1	0.365315
chr10	103367967	103389065	103378516	ENSG00000148835.10	+	protein_coding	KNOWN	TAF5	1	11	0.457996
chr10	103389041	103396466	103392753	ENSG00000173915.12	-	protein_coding	KNOWN	USMG5	5	5	0.669060
chr10	103394253	103394401	103394327	ENSG00000221767.1	-	miRNA	KNOWN	MIR1307	1	1	0.697713
chr10	103396648	103446292	103421470	ENSG00000148843.13	+	protein_coding	KNOWN	PDCD11	6	36	0.465918
chr10	103446786	103452402	103449594	ENSG00000138172.10	-	protein_coding	KNOWN	CALHM2	7	4	0.699101
chr10	103450196	103450852	103450524	ENSG00000273485.1	+	antisense	KNOWN	RP11-225H22.7	1	1	0.848566
chr10	103452846	103462695	103457770	ENSG00000234699.1	+	antisense	KNOWN	RP11-225H22.4	1	2	0.848566
chr10	103453387	103458888	103456137	ENSG00000185933.6	-	protein_coding	KNOWN	CALHM1	1	2	0.848566
chr10	103472804	103479240	103476022	ENSG00000183128.7	-	protein_coding	KNOWN	CALHM3	1	3	0.587802
chr10	103479603	103517393	103498498	ENSG00000235470.5	-	antisense	KNOWN	NEURL1-AS1	2	4	0.634857
chr10	103493979	103592552	103543265	ENSG00000107954.10	+	protein_coding	KNOWN	NEURL1	4	6	0.564281
chr10	103549075	103550964	103550019	ENSG00000226431.1	+	sense_intronic	KNOWN	RP11-416N2.3	1	2	0.445862
chr10	103594027	103855543	103724785	ENSG00000107957.16	-	protein_coding	KNOWN	SH3PXD2A	4	15	0.609319
chr10	103608619	103610050	103609334	ENSG00000273108.1	+	antisense	KNOWN	RP11-416N2.4	1	1	0.648436
chr10	103673158	103673265	103673211	ENSG00000222503.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.585902
chr10	103745966	103755423	103750694	ENSG00000280693.2	+	antisense	KNOWN	SH3PXD2A-AS1	2	4	0.384869
chr10	103877374	103879761	103878567	ENSG00000260461.1	-	sense_overlapping	KNOWN	RP11-541N10.3	1	1	0.069508
chr10	103882542	103918205	103900373	ENSG00000107960.10	-	protein_coding	KNOWN	OBFC1	4	11	0.177865
chr10	103967201	104029233	103998217	ENSG00000065613.13	+	protein_coding	KNOWN	SLK	3	19	-0.056003
chr10	103974515	103974814	103974664	ENSG00000266754.2	-	misc_RNA	KNOWN	RN7SL524P	1	1	0.100554
chr10	104031286	104086002	104058644	ENSG00000065618.16	-	protein_coding	KNOWN	COL17A1	7	56	0.293618
chr10	104048089	104048186	104048137	ENSG00000216083.1	-	miRNA	KNOWN	MIR936	1	1	0.076964
chr10	104122058	104126385	104124221	ENSG00000156384.14	+	protein_coding	KNOWN	SFR1	3	4	-0.126188
chr10	104129888	104232362	104181125	ENSG00000197748.12	-	protein_coding	KNOWN	CFAP43	7	38	-0.226199
chr10	104218789	104218883	104218836	ENSG00000208033.1	-	miRNA	KNOWN	MIR609	1	1	0.076310
chr10	104235356	104267459	104251407	ENSG00000148834.12	+	protein_coding	KNOWN	GSTO1	7	6	0.078252
chr10	104268336	104268405	104268370	ENSG00000266852.2	-	miRNA	KNOWN	MIR4482	1	1	0.158334
chr10	104268873	104304945	104286909	ENSG00000065621.14	+	protein_coding	KNOWN	GSTO2	7	7	0.125900
chr10	104309698	104338404	104324051	ENSG00000148841.15	-	protein_coding	KNOWN	ITPRIP	4	3	0.315184
chr10	104312141	104313881	104313011	ENSG00000270075.1	+	antisense	KNOWN	RP11-127L20.5	1	2	0.237597
chr10	104323369	104327004	104325186	ENSG00000228261.1	+	lincRNA	KNOWN	RP11-127L20.3	1	3	0.237597
chr10	104351591	104353575	104352583	ENSG00000231233.1	-	antisense	KNOWN	CFAP58-AS1	1	2	0.016441
chr10	104353764	104455090	104404427	ENSG00000120051.14	+	protein_coding	KNOWN	CFAP58	2	18	-0.317948
chr10	104474939	104480274	104477606	ENSG00000225768.1	-	lincRNA	KNOWN	RP11-127O4.3	1	3	-0.320607
chr10	104616102	104616973	104616537	ENSG00000237761.1	+	lincRNA	KNOWN	RP11-127O4.2	1	2	-0.229936
chr10	104641101	105265235	104953168	ENSG00000156395.12	+	protein_coding	KNOWN	SORCS3	3	28	-0.323511
chr10	104664608	104666200	104665404	ENSG00000226387.2	-	antisense	KNOWN	SORCS3-AS1	1	2	-0.008172
chr10	105534659	105534765	105534712	ENSG00000207068.1	+	snRNA	KNOWN	RNU6-463P	1	1	-0.804630
chr10	105685383	105685865	105685624	ENSG00000233477.1	-	processed_pseudogene	KNOWN	RP11-45P22.2	1	1	-0.543597
chr10	105686322	105687051	105686686	ENSG00000213260.3	+	processed_pseudogene	KNOWN	YWHAZP5	1	1	-0.543597
chr10	105808775	105819197	105813986	ENSG00000229466.1	-	lincRNA	KNOWN	RP11-56I23.1	1	3	-0.224994
chr10	106140264	106188722	106164493	ENSG00000229775.6	+	lincRNA	KNOWN	RP11-298H24.1	4	5	-0.501042
chr10	106550106	106551121	106550613	ENSG00000215002.2	+	processed_pseudogene	KNOWN	RPL23AP59	1	2	-0.271699
chr10	106573663	107164534	106869098	ENSG00000108018.15	-	protein_coding	KNOWN	SORCS1	10	26	-0.354019
chr10	106952525	106952680	106952602	ENSG00000281014.1	+	miRNA	NOVEL	AL160010.1	1	1	-0.248552
chr10	106970021	106970150	106970085	ENSG00000200626.1	+	rRNA	KNOWN	RNA5SP325	1	1	-0.270578
chr10	107461560	107461669	107461614	ENSG00000200079.1	+	rRNA	KNOWN	RNA5SP326	1	1	-0.727436
chr10	107694973	108197849	107946411	ENSG00000229981.7	-	lincRNA	KNOWN	LINC01435	21	7	-0.553880
chr10	108296099	108296532	108296315	ENSG00000234544.2	+	processed_pseudogene	KNOWN	PTGES3P5	1	1	-0.762810
chr10	108547975	108561815	108554895	ENSG00000203434.2	-	lincRNA	KNOWN	RP11-163F15.1	1	3	-0.679955
chr10	108703829	108703930	108703879	ENSG00000222631.3	-	miRNA	NOVEL	AL356476.1	1	1	-0.637154
chr10	108710518	108839363	108774940	ENSG00000223381.1	+	lincRNA	KNOWN	RP11-655H13.2	1	3	-0.292756
chr10	108848186	108849561	108848873	ENSG00000224498.1	+	processed_pseudogene	KNOWN	MAPKAPK5P1	1	1	-0.697241
chr10	108940969	108941310	108941139	ENSG00000222436.1	-	misc_RNA	KNOWN	RN7SKP278	1	1	-0.445973
chr10	109184934	109185001	109184967	ENSG00000252574.2	-	snRNA	KNOWN	RNU5B-6P	1	1	-0.253936
chr10	109239639	109239746	109239692	ENSG00000200217.1	+	snRNA	KNOWN	RNU6-839P	1	1	0.074817
chr10	109528119	109529008	109528563	ENSG00000232728.1	+	processed_pseudogene	KNOWN	PHB2P1	1	1	-0.564524
chr10	109534655	109534990	109534822	ENSG00000237242.1	+	processed_pseudogene	KNOWN	BTF3P15	1	1	-0.529497
chr10	109661814	109662050	109661932	ENSG00000270333.1	+	processed_pseudogene	KNOWN	RP11-566F5.2	1	1	-0.523185
chr10	109680442	109681041	109680741	ENSG00000270294.1	+	processed_pseudogene	KNOWN	RP11-566F5.1	1	1	-0.464402
chr10	109807651	109808129	109807890	ENSG00000224907.1	+	processed_pseudogene	KNOWN	RP11-451M19.2	1	1	-0.371409
chr10	109864766	109923553	109894159	ENSG00000108039.17	-	protein_coding	KNOWN	XPNPEP1	29	21	0.174169
chr10	109869858	109869992	109869925	ENSG00000272160.1	+	snRNA	KNOWN	RNU4-5P	1	1	0.091992
chr10	109940104	110008381	109974242	ENSG00000203876.9	-	processed_transcript	KNOWN	ADD3-AS1	5	5	-0.040534
chr10	109996368	110135565	110065966	ENSG00000148700.13	+	protein_coding	KNOWN	ADD3	21	16	-0.123010
chr10	110139214	110139426	110139320	ENSG00000226734.1	-	processed_pseudogene	KNOWN	SNRPGP12	1	1	-0.183643
chr10	110207605	110287365	110247485	ENSG00000119950.20	+	protein_coding	KNOWN	MXI1	10	7	-0.103445
chr10	110207850	110208591	110208220	ENSG00000228417.1	-	antisense	KNOWN	RP11-549L6.3	1	3	-0.110501
chr10	110257064	110257843	110257453	ENSG00000214067.2	+	processed_pseudogene	KNOWN	RP11-549L6.2	1	2	-0.405508
chr10	110290730	110304951	110297840	ENSG00000119953.12	-	protein_coding	KNOWN	SMNDC1	5	6	-0.471909
chr10	110428840	110496204	110462522	ENSG00000273143.1	-	lincRNA	KNOWN	RP11-525A16.4	2	4	0.223923
chr10	110434241	110434385	110434313	ENSG00000221359.1	+	miRNA	NOVEL	AL355512.1	1	1	0.330152
chr10	110450629	110451240	110450934	ENSG00000237642.1	+	processed_pseudogene	KNOWN	HMGB3P5	1	1	0.268870
chr10	110497838	110511544	110504691	ENSG00000138166.5	+	protein_coding	KNOWN	DUSP5	2	4	0.442577
chr10	110550115	110550854	110550484	ENSG00000233518.1	-	processed_pseudogene	KNOWN	RPL7P35	1	1	0.132181
chr10	110567691	110604636	110586163	ENSG00000108055.9	+	protein_coding	KNOWN	SMC3	2	29	0.040395
chr10	110642678	110642785	110642731	ENSG00000223302.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.176825
chr10	110644397	110839469	110741933	ENSG00000203867.7	+	protein_coding	KNOWN	RBM20	4	14	-0.010262
chr10	110756456	110756723	110756589	ENSG00000252036.1	+	misc_RNA	KNOWN	RN7SKP288	1	1	0.344179
chr10	110761142	110761242	110761192	ENSG00000199364.1	+	rRNA	KNOWN	RNA5SP327	1	1	0.344179
chr10	110869743	110871594	110870668	ENSG00000232470.1	+	lincRNA	KNOWN	RP11-313D6.3	1	2	-0.030595
chr10	110869868	110872233	110871050	ENSG00000203497.2	-	antisense	KNOWN	PDCD4-AS1	1	2	-0.075120
chr10	110871795	110900006	110885900	ENSG00000150593.15	+	protein_coding	KNOWN	PDCD4	11	13	-0.253086
chr10	110898090	110898155	110898122	ENSG00000265827.1	+	miRNA	KNOWN	MIR4680	1	1	-0.522718
chr10	110898730	110919274	110909002	ENSG00000214413.7	-	protein_coding	KNOWN	BBIP1	10	5	-0.305229
chr10	110907483	110908182	110907832	ENSG00000278601.1	+	antisense	KNOWN	RP11-348N5.9	1	1	-0.522718
chr10	110910596	110912244	110911420	ENSG00000270589.1	+	antisense	KNOWN	RP11-348N5.7	1	1	-0.040982
chr10	110919547	111013667	110966607	ENSG00000108061.11	+	protein_coding	KNOWN	SHOC2	7	9	-0.393400
chr10	110936622	110937233	110936927	ENSG00000234118.1	-	processed_pseudogene	KNOWN	RPL13AP6	1	1	-0.201454
chr10	110988926	110989013	110988969	ENSG00000221214.1	+	miRNA	KNOWN	MIR548E	1	1	-0.421348
chr10	111077163	111080907	111079035	ENSG00000150594.6	+	protein_coding	KNOWN	ADRA2A	1	1	-0.263837
chr10	111104956	111105248	111105102	ENSG00000213247.3	+	processed_pseudogene	KNOWN	RP11-479A21.1	1	1	0.030916
chr10	111322778	111323397	111323087	ENSG00000237618.1	+	processed_pseudogene	KNOWN	BTBD7P2	1	1	-0.438523
chr10	111349939	111352103	111351021	ENSG00000227851.1	-	lincRNA	KNOWN	RP11-381K7.1	1	2	-0.591589
chr10	111498191	111498941	111498566	ENSG00000230809.1	-	processed_pseudogene	KNOWN	RP11-309P22.1	1	1	-0.171043
chr10	111958712	111958799	111958755	ENSG00000277847.1	+	miRNA	NOVEL	AL392167.1	1	1	-0.172711
chr10	112149864	112215377	112182620	ENSG00000119927.13	-	protein_coding	KNOWN	GPAM	4	22	-0.235540
chr10	112283735	112305035	112294385	ENSG00000119913.4	+	protein_coding	KNOWN	TECTB	2	10	0.019239
chr10	112299612	112299690	112299651	ENSG00000276857.1	+	miRNA	KNOWN	MIR6715A	1	1	0.113260
chr10	112308181	112356574	112332377	ENSG00000243316.6	-	unitary_pseudogene	KNOWN	GUCY2GP	2	21	0.199810
chr10	112374018	112428380	112401199	ENSG00000197142.10	+	protein_coding	KNOWN	ACSL5	9	21	0.029131
chr10	112395813	112425589	112410701	ENSG00000232934.7	-	antisense	KNOWN	RP11-324O2.3	7	5	-0.121831
chr10	112424428	112446917	112435672	ENSG00000023041.11	-	protein_coding	KNOWN	ZDHHC6	5	12	-0.157405
chr10	112446998	112818744	112632871	ENSG00000151532.13	+	protein_coding	KNOWN	VTI1A	9	8	-0.154831
chr10	112548632	112548872	112548752	ENSG00000234017.1	-	processed_pseudogene	KNOWN	RP11-214N15.5	1	1	-0.512467
chr10	112634170	112634254	112634212	ENSG00000264763.1	+	miRNA	KNOWN	MIR4295	1	1	-0.142020
chr10	112671812	112677819	112674815	ENSG00000233340.1	-	antisense	KNOWN	RP11-25C19.3	1	3	-0.036113
chr10	112823490	112827726	112825608	ENSG00000260917.1	+	sense_overlapping	KNOWN	RP11-57H14.4	1	1	0.404376
chr10	112831169	112832454	112831811	ENSG00000279315.1	+	TEC	KNOWN	RP11-57H14.5	1	1	0.458774
chr10	112888735	112906111	112897423	ENSG00000225292.2	+	sense_intronic	KNOWN	RP11-57H14.3	1	3	0.101613
chr10	112950250	113167678	113058964	ENSG00000148737.15	+	protein_coding	KNOWN	TCF7L2	24	15	0.203297
chr10	112950646	112951875	112951260	ENSG00000233547.1	-	antisense	KNOWN	RP11-57H14.2	1	2	0.073376
chr10	112987476	112987865	112987670	ENSG00000227560.1	+	processed_pseudogene	KNOWN	RP11-139K1.2	1	1	-0.006572
chr10	113353425	113353484	113353454	ENSG00000238380.1	+	snRNA	KNOWN	RNU7-165P	1	1	-0.027061
chr10	113482616	113483113	113482864	ENSG00000230018.1	+	processed_pseudogene	KNOWN	RP11-481H12.1	1	1	0.152113
chr10	113550837	113589602	113570219	ENSG00000148702.14	+	protein_coding	KNOWN	HABP2	3	13	-0.005337
chr10	113588716	113664127	113626421	ENSG00000197893.13	-	protein_coding	KNOWN	NRAP	4	42	-0.134591
chr10	113679162	113730907	113705034	ENSG00000165806.19	+	protein_coding	KNOWN	CASP7	12	8	-0.074492
chr10	113710681	113719332	113715006	ENSG00000234393.1	-	antisense	KNOWN	RP11-211N11.5	1	3	-0.140299
chr10	113733116	113733234	113733175	ENSG00000281294.1	-	miRNA	NOVEL	AL592546.1	1	1	-0.305344
chr10	113751454	113783429	113767441	ENSG00000148735.14	+	protein_coding	KNOWN	PLEKHS1	7	13	-0.026872
chr10	113820459	113820590	113820524	ENSG00000212589.1	+	snoRNA	NOVEL	SNORA17	1	1	-0.002224
chr10	113834725	113854383	113844554	ENSG00000198924.7	-	protein_coding	KNOWN	DCLRE1A	3	10	-0.275408
chr10	113854661	113917194	113885927	ENSG00000196865.4	+	protein_coding	KNOWN	NHLRC2	2	11	-0.286906
chr10	114044056	114046908	114045482	ENSG00000043591.5	+	protein_coding	KNOWN	ADRB1	1	1	-0.307939
chr10	114111414	114111517	114111465	ENSG00000253066.1	+	snRNA	KNOWN	RNU6-709P	1	1	-0.040763
chr10	114117147	114117551	114117349	ENSG00000226582.1	+	processed_pseudogene	KNOWN	UBE2V1P5	1	1	-0.040763
chr10	114120862	114174220	114147541	ENSG00000165813.16	-	protein_coding	KNOWN	CCDC186	6	16	-0.416999
chr10	114168156	114168280	114168218	ENSG00000273904.1	-	ribozyme	NOVEL	Hammerhead_HH10	1	1	-0.336245
chr10	114174105	114174179	114174142	ENSG00000238742.1	-	miRNA	KNOWN	MIR2110	1	1	-0.088580
chr10	114179270	114232304	114205787	ENSG00000095627.9	+	protein_coding	KNOWN	TDRD1	3	26	-0.341877
chr10	114239330	114291513	114265421	ENSG00000165816.12	+	protein_coding	KNOWN	VWA2	3	14	0.014523
chr10	114246074	114246714	114246394	ENSG00000230165.1	+	processed_pseudogene	KNOWN	CTB-1144G6.5	1	2	-0.279567
chr10	114280725	114281258	114280991	ENSG00000275024.1	-	antisense	KNOWN	CTB-1144G6.6	1	1	0.272113
chr10	114294824	114404756	114349790	ENSG00000169129.14	-	protein_coding	KNOWN	AFAP1L2	6	19	0.083539
chr10	114423770	114424067	114423918	ENSG00000242912.3	-	misc_RNA	KNOWN	RN7SL384P	1	1	0.131738
chr10	114424445	114427398	114425921	ENSG00000279796.1	-	TEC	KNOWN	RP11-317F20.3	1	1	0.131738
chr10	114431113	114685003	114558058	ENSG00000099204.18	-	protein_coding	KNOWN	ABLIM1	14	24	0.044107
chr10	114501997	114502347	114502172	ENSG00000229668.1	-	processed_pseudogene	KNOWN	RP11-317F20.2	1	1	-0.037050
chr10	114688011	114688101	114688056	ENSG00000275685.1	-	miRNA	NOVEL	AL354873.1	1	1	-0.131634
chr10	114690143	114690634	114690388	ENSG00000228169.3	-	processed_pseudogene	KNOWN	PPIAP19	1	1	0.275704
chr10	114764788	114779903	114772345	ENSG00000228484.1	+	lincRNA	KNOWN	RP11-106M7.1	1	3	0.022786
chr10	114809375	114811170	114810272	ENSG00000215760.2	+	processed_pseudogene	KNOWN	TAF9BP2	1	2	-0.085736
chr10	114821744	114899832	114860788	ENSG00000151553.14	+	protein_coding	KNOWN	FAM160B1	4	17	0.015247
chr10	114900722	114901366	114901044	ENSG00000226428.1	+	processed_pseudogene	KNOWN	RP11-106M7.4	1	1	0.258184
chr10	114938193	114977676	114957934	ENSG00000165832.5	+	protein_coding	KNOWN	TRUB1	2	8	-0.244184
chr10	114969460	114969568	114969514	ENSG00000252611.1	-	snRNA	KNOWN	RNU6-1121P	1	1	-0.305344
chr10	114994657	114996593	114995625	ENSG00000236799.1	+	lincRNA	KNOWN	RP11-383C6.2	1	3	-0.345588
chr10	115093365	115948992	115521178	ENSG00000107518.16	+	protein_coding	KNOWN	ATRNL1	10	29	-0.570371
chr10	115819842	115820487	115820164	ENSG00000270965.1	-	processed_pseudogene	KNOWN	RP11-169K19.1	1	1	-0.434939
chr10	116056925	116273467	116165196	ENSG00000151892.14	-	protein_coding	KNOWN	GFRA1	5	11	-0.036723
chr10	116324428	116380029	116352228	ENSG00000182645.5	+	protein_coding	KNOWN	CCDC172	3	9	-0.739260
chr10	116409256	116409475	116409365	ENSG00000205433.4	+	processed_pseudogene	KNOWN	SNRPGP6	1	1	-0.283048
chr10	116427867	116477957	116452912	ENSG00000203837.4	+	protein_coding	KNOWN	PNLIPRP3	1	12	-0.677645
chr10	116439468	116440044	116439756	ENSG00000227096.1	-	processed_pseudogene	KNOWN	HMGB3P8	1	1	-0.804386
chr10	116538183	116538276	116538229	ENSG00000200935.1	+	snRNA	KNOWN	RNU6-1090P	1	1	-0.207568
chr10	116545931	116567855	116556893	ENSG00000175535.6	+	protein_coding	KNOWN	PNLIP	2	13	-0.463216
chr10	116577308	116583317	116580312	ENSG00000232091.1	+	unprocessed_pseudogene	KNOWN	PNLIPP1	1	3	-0.561205
chr10	116590385	116609175	116599780	ENSG00000187021.14	+	protein_coding	KNOWN	PNLIPRP1	21	13	-0.348581
chr10	116620953	116645143	116633048	ENSG00000266200.6	+	polymorphic_pseudogene	KNOWN	PNLIPRP2	5	13	-0.013455
chr10	116663696	116670264	116666980	ENSG00000165863.16	-	protein_coding	KNOWN	C10orf82	4	6	-0.346479
chr10	116670103	116672739	116671421	ENSG00000232767.1	+	antisense	KNOWN	RP11-498B4.5	1	3	0.197235
chr10	116671192	116742574	116706883	ENSG00000165868.12	-	protein_coding	KNOWN	HSPA12A	4	12	0.228011
chr10	116749905	116751261	116750583	ENSG00000228195.2	+	processed_pseudogene	KNOWN	RPL5P27	1	2	0.074127
chr10	116827489	116827564	116827526	ENSG00000281599.1	-	miRNA	NOVEL	AC023283.1	1	1	-0.052780
chr10	116828761	116850205	116839483	ENSG00000225302.2	-	antisense	KNOWN	RP11-539I5.1	2	4	-0.236584
chr10	116849512	116911788	116880650	ENSG00000188316.13	+	protein_coding	KNOWN	ENO4	5	16	-0.233798
chr10	116881482	117126586	117004034	ENSG00000187164.17	-	protein_coding	KNOWN	SHTN1	7	18	-0.423105
chr10	117023674	117023851	117023762	ENSG00000235742.1	-	processed_pseudogene	KNOWN	RP11-5G18.2	1	1	-0.372219
chr10	117128521	117138301	117133411	ENSG00000148704.12	-	protein_coding	KNOWN	VAX1	2	4	-0.390346
chr10	117158656	117169059	117163857	ENSG00000234474.2	-	lincRNA	KNOWN	MIR3663HG	1	2	-0.133183
chr10	117167678	117167774	117167726	ENSG00000266782.1	-	miRNA	KNOWN	MIR3663	1	1	-0.133183
chr10	117196168	117196654	117196411	ENSG00000236171.1	-	processed_pseudogene	KNOWN	RPL12P26	1	1	-0.041275
chr10	117197489	117210299	117203894	ENSG00000186795.1	+	protein_coding	KNOWN	KCNK18	1	3	-0.041338
chr10	117239600	117241923	117240761	ENSG00000225936.1	-	antisense	KNOWN	RP11-501J20.5	1	3	-0.169636
chr10	117241093	117279430	117260261	ENSG00000165646.11	+	protein_coding	KNOWN	SLC18A2	2	16	-0.007164
chr10	117267116	117268668	117267892	ENSG00000277879.1	-	antisense	KNOWN	RP11-129M16.4	1	1	0.109270
chr10	117277274	117375467	117326370	ENSG00000165650.11	-	protein_coding	KNOWN	PDZD8	4	5	-0.169396
chr10	117425194	117490419	117457806	ENSG00000258114.1	+	lincRNA	KNOWN	CTA-109P11.4	1	3	0.115810
chr10	117473215	117545068	117509141	ENSG00000229847.8	-	antisense	KNOWN	EMX2OS	7	4	0.080167
chr10	117542444	117549546	117545995	ENSG00000170370.11	+	protein_coding	KNOWN	EMX2	4	3	-0.033539
chr10	117562084	117572457	117567270	ENSG00000235198.1	-	lincRNA	KNOWN	CTA-109P11.1	1	3	0.323248
chr10	117735313	117736407	117735860	ENSG00000234952.1	+	lincRNA	KNOWN	RP11-328K15.1	1	2	-0.060907
chr10	117825903	117830518	117828210	ENSG00000263041.1	-	lincRNA	KNOWN	RP11-355F22.1	1	5	0.036615
chr10	118004916	118046603	118025759	ENSG00000107560.10	-	protein_coding	KNOWN	RAB11FIP2	4	6	-0.446292
chr10	118017487	118045810	118031648	ENSG00000231104.8	+	antisense	KNOWN	RP11-354M20.3	4	4	-0.519728
chr10	118046279	118210153	118128216	ENSG00000177640.15	+	antisense	KNOWN	CASC2	8	5	-0.451628
chr10	118113310	118113418	118113364	ENSG00000273672.1	+	miRNA	NOVEL	AC022395.1	1	1	-0.233778
chr10	118241564	118267710	118254637	ENSG00000238276.5	+	processed_transcript	KNOWN	RP11-245J24.1	4	5	-0.218075
chr10	118297930	118342328	118320129	ENSG00000165669.13	-	protein_coding	KNOWN	FAM204A	10	9	-0.256923
chr10	118357108	118365103	118361105	ENSG00000232139.5	+	lincRNA	KNOWN	LINC00867	4	3	-0.273005
chr10	118572871	118573620	118573245	ENSG00000234309.1	+	processed_pseudogene	KNOWN	SLC25A18P1	1	2	0.006875
chr10	118589989	118595699	118592844	ENSG00000119973.4	-	protein_coding	KNOWN	PRLHR	1	2	0.317450
chr10	118630923	118631042	118630982	ENSG00000263658.1	-	miRNA	NOVEL	AL356865.1	1	1	-0.011102
chr10	118643760	118644198	118643979	ENSG00000225155.4	+	processed_pseudogene	KNOWN	TOMM22P5	1	1	-0.011102
chr10	118674167	118755249	118714708	ENSG00000151893.14	-	protein_coding	KNOWN	CACUL1	7	10	-0.108968
chr10	118692361	118693535	118692948	ENSG00000277687.1	-	sense_intronic	KNOWN	RP11-427L15.2	1	1	-0.061718
chr10	118872054	118872602	118872328	ENSG00000236058.3	-	processed_pseudogene	KNOWN	RP11-215A21.2	1	1	-0.209472
chr10	118932674	118933295	118932984	ENSG00000213574.2	-	processed_pseudogene	KNOWN	LDHAP5	1	1	-0.212014
chr10	119003536	119003884	119003710	ENSG00000229272.1	-	antisense	KNOWN	RP11-498J9.2	1	2	0.197786
chr10	119005790	119005899	119005844	ENSG00000215925.1	+	miRNA	NOVEL	AL157788.1	1	1	0.197786
chr10	119029716	119033732	119031724	ENSG00000188613.6	+	protein_coding	KNOWN	NANOS1	2	1	0.131672
chr10	119033670	119080823	119057246	ENSG00000107581.12	-	protein_coding	KNOWN	EIF3A	3	23	0.217063
chr10	119060010	119060078	119060044	ENSG00000280522.1	-	miRNA	NOVEL	AL355598.1	1	1	0.365640
chr10	119060011	119060138	119060074	ENSG00000207468.1	-	snoRNA	KNOWN	SNORA19	1	1	0.365640
chr10	119060983	119061111	119061047	ENSG00000222588.1	-	snoRNA	NOVEL	SNORA19	1	1	0.365640
chr10	119093140	119093341	119093240	ENSG00000271343.1	+	processed_pseudogene	KNOWN	RP11-435O11.5	1	1	0.580182
chr10	119104086	119137984	119121035	ENSG00000119979.15	+	protein_coding	KNOWN	FAM45A	11	10	0.641271
chr10	119140767	119165667	119153217	ENSG00000183605.16	-	protein_coding	KNOWN	SFXN4	8	15	0.586190
chr10	119167703	119178833	119173268	ENSG00000165672.6	-	protein_coding	KNOWN	PRDX3	3	7	0.441281
chr10	119207589	119459742	119333665	ENSG00000198873.11	+	protein_coding	KNOWN	GRK5	2	16	0.529796
chr10	119208531	119211760	119210145	ENSG00000228485.1	+	sense_intronic	KNOWN	GRK5-IT1	1	2	0.484890
chr10	119212857	119213146	119213001	ENSG00000242853.3	+	misc_RNA	KNOWN	RN7SL749P	1	1	0.513456
chr10	119330233	119336182	119333207	ENSG00000236426.5	-	antisense	KNOWN	RP11-79M19.2	3	3	0.591979
chr10	119377972	119378043	119378007	ENSG00000265719.1	+	miRNA	KNOWN	MIR4681	1	1	0.592421
chr10	119499828	119542708	119521268	ENSG00000148908.14	-	protein_coding	KNOWN	RGS10	5	5	0.449875
chr10	119562101	119562530	119562315	ENSG00000271353.1	-	processed_pseudogene	KNOWN	RP11-179H18.8	1	1	0.070512
chr10	119571802	119597029	119584415	ENSG00000151923.17	-	protein_coding	KNOWN	TIAL1	13	13	0.199912
chr10	119621068	119621880	119621474	ENSG00000234569.1	+	processed_pseudogene	KNOWN	RAD1P1	1	1	0.147640
chr10	119638456	119639082	119638769	ENSG00000227437.1	+	processed_pseudogene	KNOWN	RP11-179H18.5	1	1	0.277103
chr10	119651370	119677819	119664594	ENSG00000151929.9	+	protein_coding	KNOWN	BAG3	2	5	0.461761
chr10	119683127	119683823	119683475	ENSG00000232823.2	-	processed_pseudogene	KNOWN	TXNP1	1	2	0.663755
chr10	119726097	119829278	119777687	ENSG00000198825.11	+	protein_coding	KNOWN	INPP5F	7	20	0.129426
chr10	119768247	119768538	119768392	ENSG00000242818.3	+	misc_RNA	KNOWN	RN7SL846P	1	1	-0.027061
chr10	119815229	119816642	119815935	ENSG00000270300.1	-	processed_pseudogene	KNOWN	PHACTR2P1	1	1	0.169528
chr10	119818866	119819133	119818999	ENSG00000282413.1	+	processed_pseudogene	KNOWN	RP11-359E7.3	1	1	0.169528
chr10	119829404	119892556	119860980	ENSG00000197771.12	-	protein_coding	KNOWN	MCMBP	5	16	0.110859
chr10	119892711	119944658	119918684	ENSG00000107651.12	+	protein_coding	KNOWN	SEC23IP	8	19	0.224985
chr10	119958513	119958592	119958552	ENSG00000265370.1	+	miRNA	KNOWN	MIR4682	1	1	0.131738
chr10	119997086	119997709	119997397	ENSG00000180230.6	-	processed_pseudogene	KNOWN	NACAP2	1	1	-0.407579
chr10	120069980	120070159	120070069	ENSG00000223455.1	-	processed_pseudogene	KNOWN	RP11-781P14.3	1	1	0.116217
chr10	120124132	120124226	120124179	ENSG00000221402.1	-	miRNA	NOVEL	AL353664.1	1	1	-0.540951
chr10	120354701	120355183	120354942	ENSG00000220842.6	-	processed_pseudogene	KNOWN	RP11-572P18.1	1	1	0.169994
chr10	120434983	120440376	120437679	ENSG00000234522.1	+	unprocessed_pseudogene	KNOWN	RP11-572P18.2	1	6	0.051120
chr10	120456954	120589855	120523404	ENSG00000203805.10	+	protein_coding	KNOWN	PLPP4	4	7	0.017799
chr10	120463834	120463931	120463882	ENSG00000265239.1	-	miRNA	NOVEL	AC073587.1	1	1	-0.118775
chr10	120597949	120600124	120599036	ENSG00000177234.7	+	lincRNA	KNOWN	LINC01561	2	1	0.187961
chr10	120761812	120851345	120806578	ENSG00000227165.7	-	antisense	KNOWN	WDR11-AS1	7	5	-0.367954
chr10	120819307	120825311	120822309	ENSG00000274461.1	+	processed_transcript	KNOWN	RP11-323P17.2	3	3	-0.587488
chr10	120851175	120909524	120880349	ENSG00000120008.15	+	protein_coding	KNOWN	WDR11	17	29	-0.297900
chr10	120879256	120880667	120879961	ENSG00000271670.1	-	antisense	KNOWN	RP11-95I16.4	1	2	-0.278846
chr10	120925547	120980700	120953123	ENSG00000227307.1	-	lincRNA	KNOWN	RP11-95I16.2	1	2	-0.030366
chr10	120984966	120985596	120985281	ENSG00000278484.1	-	lincRNA	KNOWN	RP11-95I16.6	1	1	-0.072395
chr10	121133090	121133723	121133406	ENSG00000236762.1	-	processed_pseudogene	KNOWN	RP11-159H3.1	1	2	-0.024822
chr10	121178700	121185966	121182333	ENSG00000227143.1	+	lincRNA	KNOWN	LINC01153	1	2	-0.478324
chr10	121410916	121411200	121411058	ENSG00000222979.1	+	misc_RNA	KNOWN	RN7SKP167	1	1	-0.226279
chr10	121478334	121598458	121538396	ENSG00000066468.20	-	protein_coding	KNOWN	FGFR2	25	18	-0.115951
chr10	121615425	121615839	121615632	ENSG00000223432.1	-	lincRNA	KNOWN	RP11-62L18.3	1	2	0.028216
chr10	121713607	121713994	121713800	ENSG00000223540.1	+	processed_pseudogene	KNOWN	RPS15AP5	1	1	-0.265078
chr10	121736303	121739730	121738016	ENSG00000224250.1	+	antisense	KNOWN	RP11-78A18.2	1	3	-0.354808
chr10	121740421	121928801	121834611	ENSG00000107669.17	-	protein_coding	KNOWN	ATE1	9	12	-0.298680
chr10	121846600	121846700	121846650	ENSG00000201884.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.384822
chr10	121928312	121951965	121940138	ENSG00000226864.1	+	antisense	KNOWN	ATE1-AS1	1	2	0.183815
chr10	121949412	121949487	121949449	ENSG00000273767.1	-	misc_RNA	NOVEL	ZNRD1-AS1_2	1	1	0.210869
chr10	121956782	121957098	121956940	ENSG00000276742.1	+	antisense	KNOWN	RP11-500G22.4	1	1	0.247863
chr10	121957088	121975217	121966152	ENSG00000107672.14	-	protein_coding	KNOWN	NSMCE4A	11	11	0.183018
chr10	121965764	121967700	121966732	ENSG00000273891.1	+	antisense	KNOWN	RP11-500G22.5	1	1	0.247863
chr10	121989174	122254545	122121859	ENSG00000138162.18	+	protein_coding	KNOWN	TACC2	30	23	0.194785
chr10	122271306	122338162	122304734	ENSG00000138152.8	+	protein_coding	KNOWN	BTBD16	3	16	-0.002854
chr10	122345690	122345793	122345741	ENSG00000202245.1	+	snRNA	KNOWN	RNU6-728P	1	1	-0.067665
chr10	122374696	122442602	122408649	ENSG00000107679.14	+	protein_coding	KNOWN	PLEKHA1	8	13	-0.160337
chr10	122416965	122417067	122417016	ENSG00000265442.1	+	miRNA	KNOWN	MIR3941	1	1	-0.396895
chr10	122454653	122457352	122456002	ENSG00000254636.1	+	protein_coding	KNOWN	ARMS2	1	2	0.067744
chr10	122461525	122514908	122488216	ENSG00000166033.11	+	protein_coding	KNOWN	HTRA1	2	9	0.115174
chr10	122560665	122643736	122602200	ENSG00000187908.15	+	protein_coding	KNOWN	DMBT1	8	53	0.120351
chr10	122697709	122699822	122698765	ENSG00000183559.11	-	protein_coding	KNOWN	C10orf120	2	4	-0.052398
chr10	122729455	122729740	122729597	ENSG00000274087.1	+	unprocessed_pseudogene	KNOWN	RP11-318C4.3	1	1	-0.306558
chr10	122756694	122799180	122777937	ENSG00000176584.15	+	transcribed_processed_pseudogene	KNOWN	DMBT1P1	3	28	-0.387967
chr10	122818816	122826449	122822632	ENSG00000272135.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-107C16.2	2	4	-0.186609
chr10	122832149	122850793	122841471	ENSG00000138161.12	-	protein_coding	KNOWN	CUZD1	7	11	-0.253409
chr10	122849078	122879641	122864359	ENSG00000213185.6	-	protein_coding	KNOWN	FAM24B	4	4	-0.001091
chr10	122879851	122898024	122888937	ENSG00000255624.2	+	transcribed_processed_pseudogene	KNOWN	RP11-564D11.3	2	6	-0.394151
chr10	122910701	122913111	122911906	ENSG00000203795.2	+	protein_coding	KNOWN	FAM24A	1	3	-0.291337
chr10	122930903	122954403	122942653	ENSG00000119965.12	-	protein_coding	KNOWN	C10orf88	4	6	-0.108573
chr10	122954381	122997513	122975947	ENSG00000179988.13	+	protein_coding	KNOWN	PSTK	9	7	-0.224901
chr10	122990806	123008817	122999811	ENSG00000095574.11	-	protein_coding	KNOWN	IKZF5	5	5	-0.225978
chr10	123008979	123058311	123033645	ENSG00000196177.12	+	protein_coding	KNOWN	ACADSB	4	11	-0.070428
chr10	123135962	123137741	123136851	ENSG00000188620.9	+	protein_coding	KNOWN	HMX3	1	2	0.175320
chr10	123148122	123150672	123149397	ENSG00000188816.3	+	protein_coding	KNOWN	HMX2	1	2	0.167776
chr10	123154277	123170467	123162372	ENSG00000154473.17	+	protein_coding	KNOWN	BUB3	5	8	0.125462
chr10	123171535	123171875	123171705	ENSG00000227586.5	-	processed_pseudogene	KNOWN	RP11-162A23.5	1	1	-0.589186
chr10	123323422	123323586	123323504	ENSG00000270902.1	-	processed_pseudogene	KNOWN	RP11-338O1.3	1	1	-0.370980
chr10	123356450	123517708	123437079	ENSG00000230131.5	+	lincRNA	KNOWN	RP11-282I1.1	2	5	-0.070559
chr10	123425713	123427640	123426676	ENSG00000225152.1	-	lincRNA	KNOWN	RP11-338O1.2	1	2	-0.199897
chr10	123574227	123583767	123578997	ENSG00000234542.1	+	lincRNA	KNOWN	RP11-282I1.2	1	3	0.126262
chr10	123666355	123694607	123680481	ENSG00000154478.3	+	protein_coding	KNOWN	GPR26	1	3	0.010224
chr10	123706207	123940267	123823237	ENSG00000121898.12	-	protein_coding	KNOWN	CPXM2	4	20	-0.033420
chr10	123734785	123734856	123734820	ENSG00000221293.2	-	miRNA	NOVEL	AC009987.1	1	1	0.033397
chr10	123776670	123777749	123777209	ENSG00000231138.1	+	antisense	KNOWN	RP11-391M7.3	1	2	-0.050520
chr10	123911479	123911561	123911520	ENSG00000221437.1	-	miRNA	NOVEL	AC068058.1	1	1	-0.042805
chr10	123913574	123931597	123922585	ENSG00000234677.1	-	sense_intronic	KNOWN	RP11-285A18.2	1	3	-0.044139
chr10	123991910	123992669	123992289	ENSG00000213438.2	+	processed_pseudogene	KNOWN	YBX2P1	1	1	0.198301
chr10	124004304	124004828	124004566	ENSG00000232334.1	-	processed_pseudogene	KNOWN	RP11-47G11.2	1	1	0.198301
chr10	124007666	124093607	124050636	ENSG00000182022.17	-	protein_coding	KNOWN	CHST15	5	8	0.339849
chr10	124397303	124418976	124408139	ENSG00000065154.11	-	protein_coding	KNOWN	OAT	8	10	0.362208
chr10	124445239	124450184	124447711	ENSG00000229544.8	-	protein_coding	KNOWN	NKX1-2	1	2	0.034491
chr10	124447152	124450048	124448600	ENSG00000271434.3	+	processed_transcript	KNOWN	RP13-238F13.3	2	3	0.031054
chr10	124461834	124617888	124539861	ENSG00000107902.13	+	protein_coding	KNOWN	LHPP	9	7	0.379564
chr10	124489823	124490578	124490200	ENSG00000229455.2	-	processed_pseudogene	KNOWN	RPS10P18	1	2	0.181914
chr10	124617080	124791727	124704403	ENSG00000258539.1	-	protein_coding	KNOWN	RP11-12J10.3	1	10	0.304412
chr10	124619292	124744269	124681780	ENSG00000189319.13	-	protein_coding	KNOWN	FAM53B	3	5	0.413311
chr10	124623353	124624079	124623716	ENSG00000278831.1	+	antisense	KNOWN	RP11-12J10.4	1	1	0.644164
chr10	124703625	124714217	124708921	ENSG00000233334.3	+	antisense	KNOWN	FAM53B-AS1	3	3	0.164356
chr10	124748149	124791870	124770009	ENSG00000203791.13	-	protein_coding	KNOWN	METTL10	7	8	-0.015029
chr10	124766196	124766297	124766246	ENSG00000199466.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.074181
chr10	124801785	124836670	124819227	ENSG00000165660.7	+	protein_coding	KNOWN	FAM175B	1	9	0.222535
chr10	124814958	124815062	124815010	ENSG00000207494.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.238007
chr10	124867510	124868326	124867918	ENSG00000214807.2	+	processed_pseudogene	KNOWN	NPM1P31	1	2	0.261917
chr10	124917143	124942881	124930012	ENSG00000249456.1	+	sense_overlapping	KNOWN	RP11-298J20.4	1	2	0.078719
chr10	124942123	124988189	124965156	ENSG00000019995.6	+	protein_coding	KNOWN	ZRANB1	2	9	-0.012347
chr10	124945204	124946432	124945818	ENSG00000226899.1	-	antisense	KNOWN	RP11-298J20.3	1	2	0.015820
chr10	124984317	125161170	125072743	ENSG00000175029.16	-	protein_coding	KNOWN	CTBP2	14	11	0.338905
chr10	124996064	125001491	124998777	ENSG00000273599.1	+	antisense	KNOWN	RP11-59C5.3	1	1	0.068533
chr10	125032783	125032870	125032826	ENSG00000264572.1	-	miRNA	KNOWN	MIR4296	1	1	0.559644
chr10	125162379	125162971	125162675	ENSG00000282787.1	+	lincRNA	KNOWN	RP11-151A10.3	1	1	0.279415
chr10	125166677	125166937	125166807	ENSG00000214298.3	+	processed_pseudogene	KNOWN	MRPS21P6	1	1	0.279415
chr10	125173745	125173986	125173865	ENSG00000281698.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.274791
chr10	125473686	125473932	125473809	ENSG00000233135.1	-	unprocessed_pseudogene	KNOWN	RPS27P18	1	1	-0.138306
chr10	125574371	125578445	125576408	ENSG00000237675.5	+	antisense	KNOWN	TEX36-AS1	2	5	-0.209313
chr10	125576522	125683144	125629833	ENSG00000175018.12	-	protein_coding	KNOWN	TEX36	3	4	-0.184866
chr10	125666875	125667950	125667412	ENSG00000214297.3	-	processed_pseudogene	KNOWN	ALDOAP2	1	1	-0.239459
chr10	125683229	125709677	125696453	ENSG00000228021.7	+	processed_transcript	KNOWN	RP11-383C5.3	10	6	-0.069002
chr10	125700436	125719566	125710001	ENSG00000224023.10	-	lincRNA	KNOWN	FLJ37035	6	5	-0.072201
chr10	125707416	125749525	125728470	ENSG00000280561.1	-	antisense	KNOWN	RP11-383C5.8	1	3	-0.176287
chr10	125718771	125719365	125719068	ENSG00000234134.1	-	sense_intronic	KNOWN	RP11-383C5.5	1	2	-0.083580
chr10	125719515	125764143	125741829	ENSG00000107938.17	+	protein_coding	KNOWN	EDRF1	13	26	-0.175150
chr10	125725634	125752110	125738872	ENSG00000236991.6	-	antisense	KNOWN	EDRF1-AS1	16	5	-0.237038
chr10	125766453	125775821	125771137	ENSG00000154485.4	-	protein_coding	KNOWN	MMP21	1	7	0.199483
chr10	125784980	125823248	125804114	ENSG00000188690.12	-	protein_coding	KNOWN	UROS	12	10	0.237113
chr10	125819740	125819822	125819781	ENSG00000265092.1	+	miRNA	KNOWN	MIR4484	1	1	0.077119
chr10	125823546	125853695	125838620	ENSG00000107949.16	+	protein_coding	KNOWN	BCCIP	5	8	0.122034
chr10	125836337	125896436	125866386	ENSG00000089876.11	-	protein_coding	KNOWN	DHX32	3	11	-0.062880
chr10	125842944	125843029	125842986	ENSG00000215972.1	+	miRNA	NOVEL	AL360176.1	1	1	0.200633
chr10	125869295	125869576	125869435	ENSG00000277371.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.224865
chr10	125890566	125890678	125890622	ENSG00000222629.1	-	snRNA	KNOWN	RNU2-42P	1	1	-0.331567
chr10	125896539	126009592	125953065	ENSG00000203780.10	+	protein_coding	KNOWN	FANK1	11	11	-0.236404
chr10	125960208	125960406	125960307	ENSG00000234016.1	-	processed_pseudogene	KNOWN	GNG10P1	1	1	-0.419348
chr10	125972188	125973126	125972657	ENSG00000233409.1	-	antisense	KNOWN	FANK1-AS1	1	3	-0.113869
chr10	126012381	126388455	126200418	ENSG00000148848.14	-	protein_coding	KNOWN	ADAM12	7	23	0.077868
chr10	126145474	126145582	126145528	ENSG00000222740.1	-	rRNA	KNOWN	RNA5SP328	1	1	0.099187
chr10	126272818	126273411	126273114	ENSG00000213170.3	+	processed_pseudogene	KNOWN	RP11-81B10.2	1	1	-0.158180
chr10	126387727	126387782	126387754	ENSG00000277259.1	-	miRNA	NOVEL	AL589787.1	1	1	-0.370535
chr10	126413869	126421879	126417874	ENSG00000235180.1	-	lincRNA	KNOWN	LINC00601	1	4	0.019235
chr10	126424997	126670446	126547721	ENSG00000154493.17	-	protein_coding	KNOWN	C10orf90	8	9	-0.096577
chr10	126556963	126557064	126557013	ENSG00000221717.1	-	miRNA	NOVEL	AL583860.1	1	1	-0.279977
chr10	126779702	126779774	126779738	ENSG00000199321.1	-	snoRNA	NOVEL	SNORD60	1	1	-0.513036
chr10	126905409	127452517	127178963	ENSG00000150760.12	+	protein_coding	KNOWN	DOCK1	6	52	0.099125
chr10	126988095	127026507	127007301	ENSG00000223528.7	-	antisense	KNOWN	RP11-223P11.3	11	6	0.333831
chr10	127013501	127026475	127019988	ENSG00000232935.2	-	antisense	KNOWN	RP11-223P11.2	1	4	0.511217
chr10	127135426	127196158	127165792	ENSG00000188916.8	-	protein_coding	KNOWN	FAM196A	3	6	-0.068700
chr10	127549369	127552639	127551004	ENSG00000214285.2	+	protein_coding	KNOWN	NPS	1	3	-0.296278
chr10	127734562	127736996	127735779	ENSG00000279725.1	-	TEC	KNOWN	RP11-288A5.2	1	1	-0.127177
chr10	127737235	127741186	127739210	ENSG00000186766.7	+	protein_coding	KNOWN	FOXI2	1	2	-0.127177
chr10	127867881	127868487	127868184	ENSG00000270778.1	+	processed_pseudogene	KNOWN	BUB1P1	1	1	0.024878
chr10	127877841	127892947	127885394	ENSG00000180745.4	-	protein_coding	KNOWN	CLRN3	1	3	-0.172937
chr10	127907061	128085855	127996458	ENSG00000132334.16	+	protein_coding	KNOWN	PTPRE	11	21	-0.050804
chr10	127929376	127934517	127931946	ENSG00000232259.1	-	lincRNA	KNOWN	RP11-4C20.3	1	2	-0.153370
chr10	127934698	127936167	127935432	ENSG00000227076.1	+	sense_intronic	KNOWN	RP11-4C20.4	1	2	-0.144769
chr10	128096659	128126385	128111522	ENSG00000148773.12	-	protein_coding	KNOWN	MKI67	6	17	-0.021265
chr10	128181032	128317726	128249379	ENSG00000280953.2	+	lincRNA	KNOWN	LINC01163	2	7	-0.243429
chr10	128316282	128320214	128318248	ENSG00000234640.1	-	lincRNA	KNOWN	RP11-264E18.1	1	2	0.053924
chr10	128912879	128916271	128914575	ENSG00000224190.1	+	lincRNA	KNOWN	RP11-442O18.2	1	5	-0.335179
chr10	128958772	128960062	128959417	ENSG00000232985.1	-	lincRNA	KNOWN	RP11-442O18.1	1	3	0.054321
chr10	129053003	129053052	129053027	ENSG00000275089.1	-	miRNA	NOVEL	AL355537.1	1	1	-0.128057
chr10	129278251	129291722	129284986	ENSG00000225424.1	+	lincRNA	KNOWN	RP11-168C9.1	1	2	-0.483169
chr10	129467184	129768007	129617595	ENSG00000170430.9	+	protein_coding	KNOWN	MGMT	4	5	-0.071350
chr10	129487869	129487982	129487925	ENSG00000266061.1	+	miRNA	NOVEL	AL355531.1	1	1	0.008663
chr10	129693722	129702117	129697919	ENSG00000237224.4	-	antisense	KNOWN	RP11-109A6.2	6	3	-0.094709
chr10	129768844	129769435	129769139	ENSG00000227374.1	+	lincRNA	KNOWN	RP11-109A6.3	1	2	0.052998
chr10	129835283	129963841	129899562	ENSG00000108001.13	-	protein_coding	KNOWN	EBF3	3	16	0.018997
chr10	129837505	129837794	129837649	ENSG00000275327.1	+	antisense	KNOWN	RP11-234G16.4	1	1	-0.161765
chr10	129843299	129843374	129843336	ENSG00000266676.1	-	miRNA	KNOWN	MIR4297	1	1	-0.161765
chr10	129845328	129845895	129845611	ENSG00000275005.1	+	antisense	KNOWN	RP11-234G16.5	1	1	-0.161765
chr10	130066374	130110817	130088595	ENSG00000237489.2	-	lincRNA	KNOWN	LINC00959	1	6	-0.142513
chr10	130104569	130104998	130104783	ENSG00000277218.1	-	lincRNA	KNOWN	RP11-500G10.5	1	1	-0.110825
chr10	130106046	130108481	130107263	ENSG00000233122.2	+	processed_pseudogene	KNOWN	CTAGE7P	1	1	-0.110825
chr10	130131770	130132241	130132005	ENSG00000233319.1	-	processed_pseudogene	KNOWN	PPIAP32	1	1	0.488252
chr10	130136399	130184521	130160460	ENSG00000108010.11	+	protein_coding	KNOWN	GLRX3	6	13	0.197237
chr10	130282445	130286604	130284524	ENSG00000276375.1	-	unprocessed_pseudogene	KNOWN	RP11-339B9.1	1	3	-0.145587
chr10	130439067	130483154	130461110	ENSG00000236303.2	+	lincRNA	KNOWN	RP11-540N6.1	1	2	-0.131506
chr10	130505106	130505201	130505153	ENSG00000222997.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.028177
chr10	130962588	130962668	130962628	ENSG00000264803.1	-	miRNA	KNOWN	MIR378C	1	1	-0.042494
chr10	130995306	130995387	130995346	ENSG00000266057.1	-	miRNA	NOVEL	AL607076.1	1	1	-0.284157
chr10	131092391	131311721	131202056	ENSG00000176769.9	-	protein_coding	KNOWN	TCERG1L	2	12	0.003439
chr10	131095218	131095777	131095497	ENSG00000230098.1	+	antisense	KNOWN	TCERG1L-AS1	1	2	-0.025703
chr10	131772398	131790199	131781298	ENSG00000189275.3	-	lincRNA	KNOWN	LINC01164	1	5	0.029225
chr10	131831910	131833508	131832709	ENSG00000280446.1	-	TEC	KNOWN	XX-FYM637E10_5.1	1	1	-0.095823
chr10	131891640	131895297	131893468	ENSG00000283095.1	+	lincRNA	KNOWN	ABC11-4932300O16.1	1	2	0.312382
chr10	131900644	131959834	131930239	ENSG00000175470.18	+	protein_coding	KNOWN	PPP2R2D	7	10	0.370796
chr10	131966455	131982013	131974234	ENSG00000176171.11	-	protein_coding	KNOWN	BNIP3	4	6	0.233439
chr10	131971202	131971533	131971367	ENSG00000277959.1	+	antisense	KNOWN	RP11-45A17.2	1	1	0.126590
chr10	131980240	131981337	131980788	ENSG00000273521.1	+	antisense	KNOWN	RP11-45A17.4	1	1	0.126590
chr10	131996738	131999846	131998292	ENSG00000279982.1	+	TEC	KNOWN	RP11-45A17.3	1	1	0.021602
chr10	132104671	132184809	132144740	ENSG00000188385.11	+	protein_coding	KNOWN	JAKMIP3	2	24	0.261771
chr10	132181225	132185962	132183593	ENSG00000235010.1	-	antisense	KNOWN	RP11-140A10.3	2	3	0.433460
chr10	132186900	132205776	132196338	ENSG00000151640.12	+	protein_coding	KNOWN	DPYSL4	5	14	0.604196
chr10	132207492	132331847	132269669	ENSG00000165752.16	-	protein_coding	KNOWN	STK32C	6	13	0.532954
chr10	132332154	132379918	132356036	ENSG00000148814.17	+	protein_coding	KNOWN	LRRC27	14	12	0.336993
chr10	132397168	132417863	132407515	ENSG00000171813.13	+	protein_coding	KNOWN	PWWP2B	2	3	0.806579
chr10	132419083	132420953	132420018	ENSG00000231705.1	+	lincRNA	KNOWN	RP11-432J24.2	1	2	0.818231
chr10	132433733	132441484	132437608	ENSG00000234311.1	-	antisense	KNOWN	RP11-432J24.3	1	2	0.700670
chr10	132444327	132449408	132446867	ENSG00000180066.9	+	lincRNA	KNOWN	C10orf91	3	4	0.700670
chr10	132511626	132518191	132514908	ENSG00000226900.1	-	lincRNA	KNOWN	RP11-432J24.5	1	2	0.570645
chr10	132520827	132522449	132521638	ENSG00000229081.1	-	antisense	KNOWN	LINC01165	1	1	0.570645
chr10	132537820	132783480	132660650	ENSG00000068383.18	+	protein_coding	KNOWN	INPP5A	7	16	0.574168
chr10	132783179	132786052	132784615	ENSG00000148826.8	-	protein_coding	KNOWN	NKX6-2	2	3	0.511076
chr10	132808392	132942823	132875607	ENSG00000171811.12	-	protein_coding	KNOWN	CFAP46	8	58	0.433434
chr10	132943967	132965289	132954628	ENSG00000232903.2	-	lincRNA	KNOWN	LINC01166	1	2	0.374036
chr10	132961340	132962237	132961788	ENSG00000224758.1	-	lincRNA	KNOWN	LINC01167	1	2	0.200926
chr10	132965534	132976354	132970944	ENSG00000240707.2	+	lincRNA	KNOWN	LINC01168	1	3	0.232816
chr10	133070929	133131675	133101302	ENSG00000197177.15	+	protein_coding	KNOWN	ADGRA1	3	16	0.584038
chr10	133083073	133088491	133085782	ENSG00000256925.2	-	antisense	KNOWN	ADGRA1-AS1	2	3	0.533590
chr10	133120003	133120074	133120038	ENSG00000238766.2	+	miRNA	NOVEL	AL445199.1	1	1	0.673964
chr10	133144612	133145304	133144958	ENSG00000235264.1	-	processed_pseudogene	KNOWN	RPL5P28	1	1	0.858628
chr10	133160447	133226412	133193429	ENSG00000171798.17	+	protein_coding	KNOWN	KNDC1	5	30	0.572947
chr10	133230274	133231558	133230916	ENSG00000171794.3	+	protein_coding	KNOWN	UTF1	1	2	0.529869
chr10	133237404	133241929	133239666	ENSG00000151650.7	+	protein_coding	KNOWN	VENTX	1	3	0.529869
chr10	133246478	133247891	133247184	ENSG00000166917.8	-	antisense	KNOWN	MIR202HG	2	3	0.529869
chr10	133247511	133247620	133247565	ENSG00000278352.1	-	miRNA	KNOWN	MIR202	1	1	0.529869
chr10	133257144	133257551	133257347	ENSG00000273980.1	-	lincRNA	KNOWN	RP13-49I15.6	1	1	0.813132
chr10	133262403	133276868	133269635	ENSG00000151651.15	-	protein_coding	KNOWN	ADAM8	11	23	0.785506
chr10	133278630	133312337	133295483	ENSG00000130640.13	-	protein_coding	KNOWN	TUBGCP2	10	19	0.718938
chr10	133295187	133295977	133295582	ENSG00000235245.1	-	antisense	KNOWN	RP11-122K13.12	1	3	0.702340
chr10	133308475	133313162	133310818	ENSG00000198546.14	+	protein_coding	KNOWN	ZNF511	4	6	0.691163
chr10	133309410	133352683	133331046	ENSG00000165828.13	+	protein_coding	KNOWN	PRAP1	3	8	0.707433
chr10	133324072	133336935	133330503	ENSG00000130643.8	-	protein_coding	KNOWN	CALY	5	6	0.702335
chr10	133344643	133344906	133344774	ENSG00000230306.1	-	processed_pseudogene	KNOWN	BANF1P2	1	1	0.716483
chr10	133345754	133350726	133348240	ENSG00000226699.1	-	antisense	KNOWN	RP11-122K13.7	1	2	0.729058
chr10	133355154	133358035	133356594	ENSG00000148803.11	-	protein_coding	KNOWN	FUOM	6	6	0.802485
chr10	133362480	133373689	133368084	ENSG00000127884.4	-	protein_coding	KNOWN	ECHS1	1	8	0.697990
chr10	133371556	133371663	133371609	ENSG00000265395.1	-	miRNA	KNOWN	MIR3944	1	1	0.485064
chr10	133374736	133374869	133374802	ENSG00000274685.1	-	lincRNA	KNOWN	RP11-122K13.15	1	1	0.485064
chr10	133379234	133391694	133385464	ENSG00000148832.14	+	protein_coding	KNOWN	PAOX	11	7	0.473264
chr10	133390834	133420495	133405664	ENSG00000254536.1	+	protein_coding	KNOWN	RP11-108K14.8	1	12	0.418224
chr10	133394094	133421307	133407700	ENSG00000148824.18	+	protein_coding	KNOWN	MTG1	8	11	0.421692
chr10	133420666	133424572	133422619	ENSG00000203772.7	-	protein_coding	KNOWN	SPRN	1	2	0.454562
chr10	133430394	133431318	133430856	ENSG00000273327.1	-	unprocessed_pseudogene	KNOWN	OR6L2P	1	1	0.394919
chr10	133453928	133523558	133488743	ENSG00000214279.12	+	unitary_pseudogene	KNOWN	SCART1	6	14	0.294709
chr10	133481238	133481770	133481504	ENSG00000273336.1	+	unprocessed_pseudogene	KNOWN	OR7M1P	1	1	0.397206
chr10	133497551	133497636	133497593	ENSG00000266547.1	-	miRNA	NOVEL	AL161645.1	1	1	0.176466
chr10	133520406	133561220	133540813	ENSG00000130649.9	+	protein_coding	KNOWN	CYP2E1	10	11	0.043994
chr10	133526259	133527513	133526886	ENSG00000278518.1	-	antisense	KNOWN	RP11-108K14.12	1	1	-0.320504
chr10	133553901	133569835	133561868	ENSG00000171772.15	-	protein_coding	KNOWN	SYCE1	5	13	0.012703
chr10	133575122	133576031	133575576	ENSG00000233685.1	-	unprocessed_pseudogene	KNOWN	OR6L1P	1	1	0.054902
chr10	133623895	133626795	133625345	ENSG00000225899.7	-	protein_coding	KNOWN	FRG2B	2	4	0.030005
chr10	133637408	133637892	133637650	ENSG00000213543.2	-	processed_pseudogene	KNOWN	RARRES2P2	1	1	-0.300326
chr10	133640789	133642894	133641841	ENSG00000233435.2	+	processed_pseudogene	KNOWN	AGGF1P2	1	1	-0.300326
chr10	133657235	133660635	133658935	ENSG00000230468.1	-	unprocessed_pseudogene	KNOWN	CLUHP5	1	8	-0.215355
chr10	133659580	133659675	133659627	ENSG00000221108.1	-	miRNA	NOVEL	AL845259.1	1	1	-0.215355
chr10	133664429	133665106	133664767	ENSG00000279626.1	+	unprocessed_pseudogene	KNOWN	DUX4L28	1	1	-0.215355
chr10	133665202	133665285	133665243	ENSG00000278452.1	+	miRNA	NOVEL	AL845259.8	1	1	-0.215355
chr10	133667151	133668419	133667785	ENSG00000280337.1	+	unprocessed_pseudogene	KNOWN	DUX4L25	1	1	-0.215355
chr10	133668512	133668595	133668553	ENSG00000274241.1	+	miRNA	NOVEL	AL845259.4	1	1	-0.215355
chr10	133670450	133671718	133671084	ENSG00000274599.2	+	unprocessed_pseudogene	KNOWN	DUX4L24	1	1	0.534400
chr10	133671811	133671894	133671852	ENSG00000276499.1	+	miRNA	NOVEL	AL845259.7	1	1	0.534400
chr10	133673749	133675017	133674383	ENSG00000276964.1	+	unprocessed_pseudogene	KNOWN	DUX4L23	1	1	0.534400
chr10	133675110	133675193	133675151	ENSG00000275883.1	+	miRNA	NOVEL	AL845259.6	1	1	0.534400
chr10	133677059	133678327	133677693	ENSG00000277274.1	+	unprocessed_pseudogene	KNOWN	DUX4L22	1	1	0.534400
chr10	133678420	133678503	133678461	ENSG00000274014.1	+	miRNA	NOVEL	AL845259.3	1	1	0.534400
chr10	133680369	133681637	133681003	ENSG00000275610.1	+	unprocessed_pseudogene	KNOWN	DUX4L21	1	1	0.534400
chr10	133681730	133681813	133681771	ENSG00000275292.1	+	miRNA	NOVEL	AL845259.5	1	1	0.534400
chr10	133683668	133684936	133684302	ENSG00000276164.1	+	unprocessed_pseudogene	KNOWN	DUX4L20	1	1	0.534400
chr10	133685029	133685112	133685070	ENSG00000273678.1	+	miRNA	NOVEL	AL845259.2	1	1	0.534400
chr10	133740606	133741284	133740945	ENSG00000237635.2	+	unprocessed_pseudogene	KNOWN	DUX4L29	1	1	0.000000
chr10	133741381	133741464	133741422	ENSG00000275535.1	+	miRNA	NOVEL	AL732375.3	1	1	0.000000
chr10	133743332	133744598	133743965	ENSG00000278664.1	+	unprocessed_pseudogene	KNOWN	DUX4L10	1	1	0.000000
chr10	133744691	133744774	133744732	ENSG00000277023.1	+	miRNA	NOVEL	AL732375.5	1	1	0.000000
chr10	133746641	133747907	133747274	ENSG00000278761.1	+	unprocessed_pseudogene	KNOWN	DUX4L11	1	1	0.000000
chr10	133748001	133748084	133748042	ENSG00000273801.1	+	miRNA	NOVEL	AL732375.1	1	1	0.000000
chr10	133749950	133751216	133750583	ENSG00000278790.1	+	unprocessed_pseudogene	KNOWN	DUX4L12	1	1	0.624408
chr10	133751310	133751393	133751351	ENSG00000276677.1	+	miRNA	NOVEL	AL732375.4	1	1	0.649548
chr10	133753250	133754516	133753883	ENSG00000276046.1	+	unprocessed_pseudogene	KNOWN	DUX4L13	1	1	0.649548
chr10	133754609	133754692	133754650	ENSG00000278717.1	+	miRNA	NOVEL	AL732375.7	1	1	0.649548
chr10	133756559	133757825	133757192	ENSG00000276904.1	+	unprocessed_pseudogene	KNOWN	DUX4L14	1	1	0.649548
chr10	133757919	133758002	133757960	ENSG00000274074.1	+	miRNA	NOVEL	AL732375.2	1	1	0.649548
chr10	133759859	133761125	133760492	ENSG00000278641.1	+	unprocessed_pseudogene	KNOWN	DUX4L15	1	1	0.649548
chr10	133761218	133761301	133761259	ENSG00000277045.1	+	miRNA	NOVEL	AL732375.6	1	1	0.649548
chr10	133778246	133778699	133778472	ENSG00000213147.3	+	processed_pseudogene	KNOWN	RPL23AP60	1	1	-0.067909
chr10	133778258	133778498	133778378	ENSG00000282875.1	-	processed_pseudogene	KNOWN	XXyac-YRM2136_A.2	1	1	-0.067909
chr11	75780	76143	75961	ENSG00000253826.1	+	processed_pseudogene	KNOWN	WBP1LP10	1	1	0.022090
chr11	86649	87586	87117	ENSG00000224777.3	-	unprocessed_pseudogene	KNOWN	OR4F2P	1	1	0.022090
chr11	112967	125927	119447	ENSG00000254468.2	-	lincRNA	KNOWN	RP11-304M2.6	2	4	-0.640075
chr11	123312	126123	124717	ENSG00000270921.1	+	processed_pseudogene	KNOWN	CICP23	1	2	-0.640075
chr11	127204	139612	133408	ENSG00000230724.9	-	lincRNA	KNOWN	LINC01001	3	7	0.177806
chr11	129279	186136	157707	ENSG00000255229.1	+	antisense	KNOWN	RP11-304M2.3	1	3	0.321687
chr11	152999	153102	153050	ENSG00000222225.1	-	snRNA	KNOWN	RNU6-447P	1	1	0.184504
chr11	167784	207428	187606	ENSG00000177951.17	-	protein_coding	KNOWN	BET1L	7	6	0.521065
chr11	193080	194573	193826	ENSG00000188076.2	+	protein_coding	KNOWN	SCGB1C1	1	3	0.681853
chr11	196738	200261	198499	ENSG00000177947.13	+	protein_coding	KNOWN	ODF3	4	7	0.681853
chr11	203623	205470	204546	ENSG00000254559.1	+	antisense	KNOWN	RP11-304M2.5	1	2	0.681853
chr11	207511	215113	211312	ENSG00000177963.12	+	protein_coding	KNOWN	RIC8A	17	10	0.911078
chr11	209336	209406	209371	ENSG00000274298.1	+	miRNA	KNOWN	MIR6743	1	1	0.681853
chr11	215458	236931	226194	ENSG00000142082.14	-	protein_coding	KNOWN	SIRT3	16	7	0.968822
chr11	236546	252984	244765	ENSG00000185627.17	+	protein_coding	KNOWN	PSMD13	15	15	0.869910
chr11	243099	243483	243291	ENSG00000277290.1	-	processed_pseudogene	KNOWN	RP11-326C3.16	1	1	0.856019
chr11	278365	285359	281862	ENSG00000174885.12	+	protein_coding	KNOWN	NLRP6	3	8	1.019479
chr11	287305	288987	288146	ENSG00000255026.1	+	antisense	KNOWN	RP11-326C3.2	3	3	1.019479
chr11	289135	296107	292621	ENSG00000142102.15	+	protein_coding	KNOWN	ATHL1	8	14	1.319833
chr11	298200	299526	298863	ENSG00000206013.2	-	protein_coding	KNOWN	IFITM5	1	2	1.362319
chr11	303856	304144	304000	ENSG00000255533.1	-	processed_pseudogene	KNOWN	RP11-326C3.4	1	1	1.362319
chr11	307631	315272	311451	ENSG00000185201.16	+	protein_coding	KNOWN	IFITM2	6	3	1.440425
chr11	310139	311141	310640	ENSG00000254910.1	-	antisense	KNOWN	RP11-326C3.7	1	2	1.475501
chr11	313506	315272	314389	ENSG00000185885.15	+	protein_coding	KNOWN	IFITM1	4	3	1.475501
chr11	318640	325631	322135	ENSG00000251661.3	+	antisense	KNOWN	RP11-326C3.11	3	2	1.475501
chr11	319669	327537	323603	ENSG00000142089.15	-	protein_coding	KNOWN	IFITM3	4	3	1.475501
chr11	321991	322426	322208	ENSG00000255089.1	+	antisense	KNOWN	RP11-326C3.10	1	2	1.475501
chr11	322186	322727	322456	ENSG00000270105.1	-	lincRNA	KNOWN	RP11-326C3.14	1	2	1.475501
chr11	325703	326294	325998	ENSG00000270030.1	-	lincRNA	KNOWN	RP11-326C3.13	1	1	1.475501
chr11	327171	330122	328646	ENSG00000255328.1	+	lincRNA	KNOWN	RP11-326C3.12	3	3	1.457643
chr11	333192	333688	333440	ENSG00000270972.1	+	lincRNA	KNOWN	RP11-326C3.15	1	1	1.047044
chr11	369796	382116	375956	ENSG00000182272.11	+	protein_coding	KNOWN	B4GALNT4	5	20	1.291562
chr11	392614	404908	398761	ENSG00000184363.9	+	protein_coding	KNOWN	PKP3	11	13	1.515892
chr11	405716	417455	411585	ENSG00000185187.12	-	protein_coding	KNOWN	SIGIRR	22	10	1.381336
chr11	417933	442011	429972	ENSG00000185101.12	-	protein_coding	KNOWN	ANO9	8	23	1.133906
chr11	440399	440693	440546	ENSG00000243562.3	-	misc_RNA	KNOWN	RN7SL838P	1	1	0.963005
chr11	448268	491399	469833	ENSG00000174915.11	+	protein_coding	KNOWN	PTDSS2	13	12	1.045509
chr11	462930	463899	463414	ENSG00000255237.1	-	antisense	KNOWN	RP13-317D12.3	1	2	0.955746
chr11	494512	507300	500906	ENSG00000023191.16	-	protein_coding	KNOWN	RNH1	24	11	1.343344
chr11	528907	529659	529283	ENSG00000254739.1	+	antisense	KNOWN	RP13-46H24.1	1	2	1.349790
chr11	532242	537287	534764	ENSG00000174775.16	-	protein_coding	KNOWN	HRAS	11	7	1.206734
chr11	537527	554916	546221	ENSG00000161328.10	+	protein_coding	KNOWN	LRRC56	1	14	1.245523
chr11	554855	560779	557817	ENSG00000185522.8	-	protein_coding	KNOWN	LMNTD2	5	14	1.343910
chr11	557595	560107	558851	ENSG00000254815.5	+	antisense	KNOWN	RP11-496I9.1	3	3	1.343910
chr11	560404	564021	562212	ENSG00000099849.14	+	protein_coding	KNOWN	RASSF7	8	6	1.343910
chr11	565660	568457	567058	ENSG00000247095.2	-	lincRNA	KNOWN	MIR210HG	4	2	1.343910
chr11	568089	568198	568143	ENSG00000199038.1	-	miRNA	KNOWN	MIR210	1	1	1.343910
chr11	576486	612222	594354	ENSG00000070047.11	+	protein_coding	KNOWN	PHRF1	6	18	1.384509
chr11	612553	615999	614276	ENSG00000185507.19	-	protein_coding	KNOWN	IRF7	16	11	1.684334
chr11	616565	626078	621321	ENSG00000099834.18	-	protein_coding	KNOWN	CDHR5	10	16	1.684334
chr11	626431	627143	626787	ENSG00000070031.3	-	protein_coding	KNOWN	SCT	1	4	1.684334
chr11	637293	640706	638999	ENSG00000069696.6	+	protein_coding	KNOWN	DRD4	2	4	1.213708
chr11	644233	706715	675474	ENSG00000177030.16	-	protein_coding	KNOWN	DEAF1	12	12	1.221266
chr11	665910	678391	672150	ENSG00000255158.1	+	antisense	KNOWN	RP11-754B17.1	1	3	1.260933
chr11	694438	727727	711082	ENSG00000177106.14	+	protein_coding	KNOWN	EPS8L2	31	22	1.195348
chr11	695428	705028	700228	ENSG00000177042.14	+	protein_coding	KNOWN	TMEM80	7	6	1.183140
chr11	708564	727047	717805	ENSG00000269915.1	-	antisense	KNOWN	AP006621.9	1	2	1.204284
chr11	747329	765024	756176	ENSG00000177156.10	+	protein_coding	KNOWN	TALDO1	9	8	1.073153
chr11	767220	777488	772354	ENSG00000177225.16	-	protein_coding	KNOWN	PDDC1	16	8	1.281574
chr11	777578	784297	780937	ENSG00000255284.1	+	lincRNA	KNOWN	AP006621.5	3	4	1.392116
chr11	779617	780755	780186	ENSG00000279672.1	+	TEC	KNOWN	CMB9-55F22.1	2	3	1.392116
chr11	781645	782105	781875	ENSG00000255142.1	+	lincRNA	KNOWN	AP006621.6	1	2	1.392116
chr11	787104	790123	788613	ENSG00000184524.5	-	protein_coding	KNOWN	CEND1	2	2	1.388331
chr11	790475	798333	794404	ENSG00000177542.10	-	protein_coding	KNOWN	SLC25A22	31	10	1.299964
chr11	797511	799190	798350	ENSG00000274897.2	+	protein_coding	KNOWN	PANO1	1	1	1.299964
chr11	799179	809753	804466	ENSG00000177595.17	-	protein_coding	KNOWN	PIDD1	11	16	1.299964
chr11	809647	812880	811263	ENSG00000177600.8	+	protein_coding	KNOWN	RPLP2	8	5	1.520455
chr11	811681	811814	811747	ENSG00000199785.1	+	snoRNA	KNOWN	SNORA52	1	1	1.547395
chr11	818902	825573	822237	ENSG00000177666.15	+	protein_coding	KNOWN	PNPLA2	7	10	1.547395
chr11	823634	832883	828258	ENSG00000255108.1	-	antisense	KNOWN	AP006621.8	2	3	1.598454
chr11	826144	831991	829067	ENSG00000177685.16	+	protein_coding	KNOWN	CRACR2B	14	9	1.603182
chr11	832843	839831	836337	ENSG00000177697.17	+	protein_coding	KNOWN	CD151	21	10	1.711143
chr11	837356	842545	839950	ENSG00000177700.5	-	protein_coding	KNOWN	POLR2L	2	3	1.711143
chr11	842808	867116	854962	ENSG00000214063.10	+	protein_coding	KNOWN	TSPAN4	20	9	1.603791
chr11	856880	859795	858337	ENSG00000250397.2	-	antisense	KNOWN	RP11-1391J7.1	1	2	1.558691
chr11	867860	915058	891459	ENSG00000177830.17	-	protein_coding	KNOWN	CHID1	24	14	1.351120
chr11	924894	1012245	968569	ENSG00000183020.13	+	protein_coding	KNOWN	AP2A2	23	22	1.023923
chr11	948421	948524	948472	ENSG00000222561.1	+	snRNA	KNOWN	RNU6-1025P	1	1	1.028266
chr11	951295	951364	951329	ENSG00000264671.1	-	miRNA	NOVEL	AP006477.1	1	1	0.741085
chr11	1012821	1036706	1024763	ENSG00000184956.15	-	protein_coding	KNOWN	MUC6	4	33	1.145255
chr11	1049880	1055749	1052814	ENSG00000254872.3	+	lincRNA	KNOWN	RP13-870H17.3	2	4	1.159133
chr11	1074875	1110511	1092693	ENSG00000198788.8	+	processed_transcript	KNOWN	MUC2	3	49	1.116778
chr11	1157953	1201138	1179545	ENSG00000215182.8	+	protein_coding	KNOWN	MUC5AC	1	49	1.055187
chr11	1223066	1262172	1242619	ENSG00000117983.17	+	protein_coding	KNOWN	MUC5B	5	49	1.231102
chr11	1242261	1249676	1245968	ENSG00000255177.2	-	antisense	KNOWN	RP11-532E4.2	1	2	1.387037
chr11	1256605	1256670	1256637	ENSG00000275669.1	+	miRNA	KNOWN	MIR6744	1	1	1.258642
chr11	1274371	1309654	1292012	ENSG00000078902.15	-	protein_coding	KNOWN	TOLLIP	13	6	0.775836
chr11	1309769	1310707	1310238	ENSG00000255153.1	+	antisense	KNOWN	TOLLIP-AS1	1	1	0.779230
chr11	1389899	1462689	1426294	ENSG00000174672.15	+	protein_coding	KNOWN	BRSK2	15	21	0.997154
chr11	1469457	1501247	1485352	ENSG00000182208.12	-	protein_coding	KNOWN	MOB2	7	5	0.885350
chr11	1554044	1571920	1562982	ENSG00000184545.10	-	protein_coding	KNOWN	DUSP8	3	7	1.002607
chr11	1571353	1599184	1585268	ENSG00000233930.3	+	antisense	KNOWN	KRTAP5-AS1	4	2	0.863668
chr11	1580492	1585989	1583240	ENSG00000278919.1	+	protein_coding	KNOWN	AP006285.2	1	3	0.882815
chr11	1584342	1585283	1584812	ENSG00000205869.2	-	protein_coding	KNOWN	KRTAP5-1	1	1	0.882815
chr11	1597177	1598294	1597735	ENSG00000205867.3	-	protein_coding	KNOWN	KRTAP5-2	1	1	0.824800
chr11	1607565	1608463	1608014	ENSG00000196224.7	-	protein_coding	KNOWN	KRTAP5-3	1	1	0.824800
chr11	1620958	1622138	1621548	ENSG00000241598.5	-	protein_coding	KNOWN	KRTAP5-4	2	2	0.201443
chr11	1629775	1630707	1630241	ENSG00000185940.10	+	protein_coding	KNOWN	KRTAP5-5	1	1	0.449820
chr11	1662584	1663343	1662963	ENSG00000231487.1	-	lincRNA	KNOWN	AP006285.7	1	2	0.719018
chr11	1665597	1667856	1666726	ENSG00000205866.3	+	lincRNA	KNOWN	FAM99A	2	3	0.719018
chr11	1683269	1685629	1684449	ENSG00000205865.4	-	antisense	KNOWN	FAM99B	1	3	0.658441
chr11	1688297	1689056	1688676	ENSG00000227306.1	+	lincRNA	KNOWN	AP006285.6	1	2	0.658441
chr11	1697195	1697755	1697475	ENSG00000205864.1	+	protein_coding	KNOWN	KRTAP5-6	1	1	0.894955
chr11	1732410	1750591	1741500	ENSG00000244242.1	-	protein_coding	KNOWN	IFITM10	4	4	0.213638
chr11	1747806	1759051	1753428	ENSG00000250644.2	-	protein_coding	KNOWN	RP11-295K3.1	1	6	0.794936
chr11	1752752	1763992	1758372	ENSG00000117984.12	-	protein_coding	KNOWN	CTSD	6	9	0.941702
chr11	1760348	1762486	1761417	ENSG00000235027.1	+	antisense	KNOWN	AC068580.6	1	2	0.941702
chr11	1763009	1763749	1763379	ENSG00000229512.1	-	sense_intronic	KNOWN	AC068580.5	1	2	0.941702
chr11	1763931	1764025	1763978	ENSG00000265587.1	+	miRNA	NOVEL	AC068580.1	1	1	0.941702
chr11	1776930	1778388	1777659	ENSG00000230834.1	-	lincRNA	KNOWN	AC068580.7	1	2	1.123801
chr11	1792553	1792870	1792711	ENSG00000230980.1	+	processed_pseudogene	KNOWN	RPL36AP39	1	1	0.473500
chr11	1802889	1804095	1803492	ENSG00000230080.2	-	processed_pseudogene	KNOWN	AC139143.2	1	1	0.473500
chr11	1828307	1837521	1832914	ENSG00000149043.16	+	protein_coding	KNOWN	SYT8	14	9	1.158660
chr11	1838989	1841680	1840334	ENSG00000130598.15	+	protein_coding	KNOWN	TNNI2	6	8	1.287417
chr11	1852970	1892267	1872618	ENSG00000130592.13	+	protein_coding	KNOWN	LSP1	17	12	0.888745
chr11	1859464	1859536	1859500	ENSG00000264493.1	-	miRNA	KNOWN	MIR4298	1	1	0.697939
chr11	1864177	1866667	1865422	ENSG00000249086.1	+	sense_overlapping	KNOWN	AC051649.12	1	2	0.697939
chr11	1880045	1880147	1880096	ENSG00000273848.1	+	miRNA	KNOWN	MIR7847	1	1	1.043357
chr11	1889145	1890854	1889999	ENSG00000184682.5	-	protein_coding	KNOWN	PRR33	1	1	1.000641
chr11	1902647	1907915	1905281	ENSG00000229671.1	+	lincRNA	KNOWN	LINC01150	1	3	0.957974
chr11	1919562	1938706	1929134	ENSG00000130595.16	+	protein_coding	KNOWN	TNNT3	14	17	0.736151
chr11	1947278	1984522	1965900	ENSG00000214026.10	+	protein_coding	KNOWN	MRPL23	10	6	0.849399
chr11	1983237	1989920	1986578	ENSG00000226416.1	-	antisense	KNOWN	MRPL23-AS1	1	4	0.998882
chr11	1991096	1993469	1992282	ENSG00000232987.1	+	lincRNA	KNOWN	LINC01219	1	3	1.141358
chr11	1995163	2001470	1998316	ENSG00000130600.15	-	processed_transcript	KNOWN	H19	13	6	1.141358
chr11	1996540	1996610	1996575	ENSG00000275266.1	+	misc_RNA	NOVEL	H19_1	1	1	1.141358
chr11	1996730	1996842	1996786	ENSG00000278648.1	-	miRNA	KNOWN	MIR675	1	1	1.141358
chr11	1997484	1997552	1997518	ENSG00000274866.1	+	misc_RNA	NOVEL	H19_2	1	1	1.141358
chr11	1997713	1997828	1997770	ENSG00000280586.1	+	misc_RNA	NOVEL	H19_3	1	1	1.141358
chr11	2129112	2141238	2135175	ENSG00000167244.18	-	protein_coding	KNOWN	IGF2	7	5	1.084264
chr11	2129121	2129964	2129542	ENSG00000240801.1	-	3prime_overlapping_ncrna	KNOWN	AC132217.4	1	2	0.799498
chr11	2132538	2161209	2146873	ENSG00000129965.13	-	protein_coding	KNOWN	INS-IGF2	4	7	1.061309
chr11	2134111	2134222	2134166	ENSG00000207805.2	-	miRNA	KNOWN	MIR483	1	1	1.106738
chr11	2140501	2148666	2144583	ENSG00000099869.7	+	antisense	KNOWN	IGF2-AS	3	3	1.106738
chr11	2159779	2161341	2160560	ENSG00000254647.6	-	protein_coding	KNOWN	INS	5	3	0.990547
chr11	2163929	2171877	2167903	ENSG00000180176.14	-	protein_coding	KNOWN	TH	11	14	0.934064
chr11	2173063	2173138	2173100	ENSG00000265258.1	+	miRNA	KNOWN	MIR4686	1	1	0.751501
chr11	2268495	2270952	2269723	ENSG00000183734.4	-	protein_coding	KNOWN	ASCL2	1	2	0.588267
chr11	2295645	2303049	2299347	ENSG00000110665.11	-	protein_coding	KNOWN	C11orf21	4	5	0.644533
chr11	2301997	2318200	2310098	ENSG00000064201.15	+	protein_coding	KNOWN	TSPAN32	17	10	0.803844
chr11	2321718	2321827	2321772	ENSG00000207308.1	+	snRNA	KNOWN	RNU6-878P	1	1	0.959289
chr11	2328749	2377992	2353370	ENSG00000238184.1	-	antisense	KNOWN	CD81-AS1	2	3	0.572542
chr11	2335132	2335776	2335454	ENSG00000236264.4	-	transcribed_processed_pseudogene	KNOWN	RPL26P30	2	1	0.495714
chr11	2372638	2372750	2372694	ENSG00000199550.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.702580
chr11	2376177	2397419	2386798	ENSG00000110651.11	+	protein_coding	KNOWN	CD81	17	9	0.802377
chr11	2400488	2403878	2402183	ENSG00000184281.14	+	protein_coding	KNOWN	TSSC4	10	6	0.988280
chr11	2404515	2423045	2413780	ENSG00000070985.13	-	protein_coding	KNOWN	TRPM5	4	24	0.966943
chr11	2404515	2407908	2406211	ENSG00000230483.1	+	antisense	KNOWN	AC124057.5	1	2	0.988280
chr11	2444684	2849109	2646896	ENSG00000053918.15	+	protein_coding	KNOWN	KCNQ1	6	16	0.534106
chr11	2608328	2699994	2654161	ENSG00000269821.1	-	antisense	KNOWN	KCNQ1OT1	1	1	0.112418
chr11	2652099	2652562	2652330	ENSG00000275666.1	+	misc_RNA	NOVEL	KCNQ1OT1_1	1	1	0.212673
chr11	2674097	2674292	2674194	ENSG00000276105.1	+	misc_RNA	NOVEL	KCNQ1OT1_2	1	1	0.570645
chr11	2674625	2674740	2674682	ENSG00000276494.1	+	misc_RNA	NOVEL	KCNQ1OT1_3	1	1	0.570645
chr11	2697851	2698076	2697963	ENSG00000276015.1	+	misc_RNA	NOVEL	KCNQ1OT1_5	1	1	0.569845
chr11	2771356	2771577	2771466	ENSG00000236041.1	+	processed_pseudogene	KNOWN	COX6CP18	1	1	0.896800
chr11	2840135	2861568	2850851	ENSG00000229414.2	-	antisense	KNOWN	KCNQ1-AS1	1	3	0.985602
chr11	2870033	2872105	2871069	ENSG00000237941.2	+	antisense	KNOWN	KCNQ1DN	1	2	0.800826
chr11	2871437	2871498	2871467	ENSG00000274740.1	+	misc_RNA	NOVEL	KCNQ1DN	1	1	0.800826
chr11	2883213	2885881	2884547	ENSG00000129757.12	-	protein_coding	KNOWN	CDKN1C	5	4	0.800826
chr11	2887780	2903740	2895760	ENSG00000254827.5	-	protein_coding	KNOWN	SLC22A18AS	3	4	0.755238
chr11	2899721	2925246	2912483	ENSG00000110628.13	+	protein_coding	KNOWN	SLC22A18	13	11	0.950731
chr11	2928273	2929455	2928864	ENSG00000181649.5	-	protein_coding	KNOWN	PHLDA2	1	2	1.087476
chr11	2944431	2992377	2968404	ENSG00000205531.12	-	protein_coding	KNOWN	NAP1L4	22	16	0.558915
chr11	2963771	2963893	2963832	ENSG00000207008.1	-	snoRNA	KNOWN	SNORA54	1	1	0.597567
chr11	2989863	2991344	2990603	ENSG00000183562.3	+	antisense	KNOWN	CTC-343N3.1	1	1	0.607935
chr11	3000922	3057613	3029267	ENSG00000110619.16	-	protein_coding	KNOWN	CARS	15	23	0.972754
chr11	3029009	3041260	3035134	ENSG00000247473.2	+	antisense	KNOWN	CARS-AS1	2	2	0.868172
chr11	3048359	3048521	3048440	ENSG00000201616.1	-	snRNA	KNOWN	RNU1-91P	1	1	0.841381
chr11	3084393	3085443	3084918	ENSG00000236710.1	-	processed_pseudogene	KNOWN	AC108448.2	1	2	0.608242
chr11	3087116	3166739	3126927	ENSG00000021762.19	-	protein_coding	KNOWN	OSBPL5	19	22	0.995303
chr11	3189546	3189929	3189737	ENSG00000234791.1	+	antisense	KNOWN	AC108448.3	1	2	0.732449
chr11	3210285	3210551	3210418	ENSG00000280914.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.721520
chr11	3217944	3218813	3218378	ENSG00000182170.3	-	protein_coding	KNOWN	MRGPRG	1	1	0.721520
chr11	3218332	3223131	3220731	ENSG00000236301.5	+	antisense	KNOWN	MRGPRG-AS1	3	3	0.721520
chr11	3226061	3232838	3229449	ENSG00000224513.2	+	antisense	KNOWN	AC109309.4	1	3	0.827738
chr11	3227698	3232386	3230042	ENSG00000184350.9	-	protein_coding	KNOWN	MRGPRE	1	2	0.850623
chr11	3276045	3276390	3276217	ENSG00000236987.2	+	processed_pseudogene	KNOWN	NDUFA5P8	1	1	0.309090
chr11	3289311	3289642	3289476	ENSG00000276951.1	-	processed_pseudogene	KNOWN	RP11-11A9.1	1	1	0.309090
chr11	3321862	3322202	3322032	ENSG00000232390.3	+	processed_pseudogene	KNOWN	NDUFA5P1	1	1	0.260389
chr11	3335125	3335407	3335266	ENSG00000273813.1	-	processed_pseudogene	KNOWN	RP11-11A9.2	1	1	0.503969
chr11	3336721	3340630	3338675	ENSG00000254592.1	+	antisense	KNOWN	RP5-1173A5.1	1	2	0.503969
chr11	3339261	3379222	3359241	ENSG00000005801.16	-	protein_coding	KNOWN	ZNF195	30	7	0.261443
chr11	3373529	3373621	3373575	ENSG00000263365.1	-	miRNA	NOVEL	AC123788.1	1	1	0.218822
chr11	3380961	3408978	3394969	ENSG00000223756.6	+	transcribed_unprocessed_pseudogene	KNOWN	TSSC2	6	10	0.288200
chr11	3390780	3391752	3391266	ENSG00000189398.5	-	unprocessed_pseudogene	KNOWN	OR7E12P	1	1	0.321238
chr11	3410352	3422496	3416424	ENSG00000166492.9	-	unprocessed_pseudogene	KNOWN	FAM86GP	1	8	0.598404
chr11	3469319	3531328	3500323	ENSG00000254757.1	+	lincRNA	KNOWN	RP13-726E6.1	1	3	0.136272
chr11	3481520	3581211	3531365	ENSG00000255367.1	-	lincRNA	KNOWN	RP13-726E6.2	2	5	0.169949
chr11	3531420	3531608	3531514	ENSG00000255522.1	+	processed_pseudogene	KNOWN	SNRPCP5	1	1	0.191527
chr11	3549745	3550519	3550132	ENSG00000237226.1	-	processed_pseudogene	KNOWN	RPS3AP39	1	1	0.191859
chr11	3557342	3557489	3557415	ENSG00000221019.1	+	miRNA	NOVEL	AC127526.1	1	1	0.192021
chr11	3559657	3560022	3559839	ENSG00000223688.2	+	processed_pseudogene	KNOWN	RPS24P14	1	1	0.192021
chr11	3591277	3591615	3591446	ENSG00000230851.1	-	processed_pseudogene	KNOWN	AP006294.2	1	1	0.338010
chr11	3599595	3600706	3600150	ENSG00000238161.1	-	unprocessed_pseudogene	KNOWN	OR7E117P	1	1	0.338010
chr11	3609901	3637559	3623730	ENSG00000182048.11	+	transcribed_unprocessed_pseudogene	KNOWN	TRPC2	2	17	0.191250
chr11	3638503	3642316	3640409	ENSG00000167311.13	-	protein_coding	KNOWN	ART5	5	5	0.321918
chr11	3645128	3664416	3654772	ENSG00000129744.2	+	protein_coding	KNOWN	ART1	2	5	0.484760
chr11	3663815	3663911	3663863	ENSG00000201279.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.539778
chr11	3665164	3665259	3665211	ENSG00000200201.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.539778
chr11	3665587	3671384	3668485	ENSG00000129749.3	-	protein_coding	KNOWN	CHRNA10	4	5	0.492479
chr11	3671083	3797792	3734437	ENSG00000110713.15	-	protein_coding	KNOWN	NUP98	20	33	0.237534
chr11	3714772	3714875	3714823	ENSG00000251934.1	-	snRNA	KNOWN	RNU6-1143P	1	1	0.326856
chr11	3781395	3781456	3781425	ENSG00000238304.1	+	snRNA	KNOWN	RNU7-50P	1	1	0.291832
chr11	3797724	3826371	3812047	ENSG00000148985.19	+	protein_coding	KNOWN	PGAP2	37	8	0.589850
chr11	3826978	3840983	3833980	ENSG00000177105.9	-	protein_coding	KNOWN	RHOG	4	2	0.693354
chr11	3854318	3855509	3854913	ENSG00000228661.1	-	antisense	KNOWN	AC090587.5	1	2	0.519629
chr11	3854527	4093210	3973868	ENSG00000167323.9	+	protein_coding	KNOWN	STIM1	20	13	0.220964
chr11	3854612	3855399	3855005	ENSG00000229368.1	+	sense_overlapping	KNOWN	AC090587.4	1	2	0.519629
chr11	3856062	3856141	3856101	ENSG00000263421.1	+	miRNA	KNOWN	MIR4687	1	1	0.519629
chr11	3892398	3892887	3892642	ENSG00000230593.3	-	processed_pseudogene	KNOWN	AC090804.1	1	1	0.233238
chr11	3922567	3922703	3922635	ENSG00000206976.1	+	snoRNA	NOVEL	SNORA7	1	1	0.673723
chr11	3961277	3961538	3961407	ENSG00000255232.1	+	processed_pseudogene	KNOWN	RP11-438N5.4	1	1	0.032010
chr11	3972881	3974237	3973559	ENSG00000255141.1	-	processed_pseudogene	KNOWN	HNRNPA1P76	1	2	0.022950
chr11	3989163	3989463	3989313	ENSG00000224555.3	-	processed_pseudogene	KNOWN	RP11-438N5.2	1	1	0.022950
chr11	4018948	4019118	4019033	ENSG00000240385.1	+	processed_pseudogene	KNOWN	RPS29P20	1	1	0.121436
chr11	4094707	4138876	4116791	ENSG00000167325.14	+	protein_coding	KNOWN	RRM1	14	20	0.415742
chr11	4137116	4138257	4137686	ENSG00000255276.1	-	antisense	KNOWN	RRM1-AS1	1	2	0.284637
chr11	4146282	4147295	4146788	ENSG00000231548.1	-	unitary_pseudogene	KNOWN	OR55B1P	1	1	0.284637
chr11	4187140	4202655	4194897	ENSG00000254480.1	+	lincRNA	KNOWN	RP11-23F23.2	1	2	0.100606
chr11	4210354	4212091	4211222	ENSG00000255387.1	-	processed_pseudogene	KNOWN	RP11-23F23.3	1	1	-0.075118
chr11	4233286	4233869	4233577	ENSG00000237565.3	+	processed_pseudogene	KNOWN	SSU72P5	1	1	-0.168536
chr11	4242062	4242641	4242351	ENSG00000255194.3	-	processed_pseudogene	KNOWN	SSU72P2	1	1	-0.168536
chr11	4278705	4279192	4278948	ENSG00000236175.3	+	processed_pseudogene	KNOWN	SSU72P6	1	1	-0.227998
chr11	4287502	4288083	4287792	ENSG00000186223.4	-	processed_pseudogene	KNOWN	SSU72P4	1	1	-0.227998
chr11	4329865	4330446	4330155	ENSG00000186232.3	+	processed_pseudogene	KNOWN	SSU72P3	1	1	-0.146099
chr11	4338663	4339245	4338954	ENSG00000229542.3	-	processed_pseudogene	KNOWN	SSU72P7	1	1	-0.163567
chr11	4367263	4368386	4367824	ENSG00000221996.5	-	polymorphic_pseudogene	KNOWN	OR52B4	2	1	-0.248632
chr11	4367351	4368295	4367823	ENSG00000280253.1	-	protein_coding	KNOWN	AC009758.1	1	1	-0.248632
chr11	4378282	4379209	4378745	ENSG00000175800.5	+	unitary_pseudogene	KNOWN	OR52B3P	1	1	-0.395123
chr11	4384897	4393696	4389296	ENSG00000132109.9	-	protein_coding	KNOWN	TRIM21	2	7	-0.197081
chr11	4418060	4418963	4418511	ENSG00000237272.1	+	unitary_pseudogene	KNOWN	OR51R1P	1	1	-0.219367
chr11	4431323	4432277	4431800	ENSG00000171999.7	-	unitary_pseudogene	KNOWN	OR52P2P	1	1	-0.058149
chr11	4446642	4446727	4446684	ENSG00000221030.1	+	miRNA	NOVEL	AC010930.1	1	1	-0.058149
chr11	4449295	4450361	4449828	ENSG00000181963.5	+	protein_coding	KNOWN	OR52K2	1	1	0.021001
chr11	4474813	4475755	4475284	ENSG00000225101.4	+	unprocessed_pseudogene	KNOWN	OR52K3P	1	1	-0.064734
chr11	4488879	4489908	4489393	ENSG00000196778.2	+	protein_coding	KNOWN	OR52K1	1	1	-0.064734
chr11	4514966	4515924	4515445	ENSG00000226616.1	-	unprocessed_pseudogene	KNOWN	OR52M2P	1	1	-0.566220
chr11	4545191	4546144	4545667	ENSG00000197790.1	+	protein_coding	KNOWN	OR52M1	1	1	0.021170
chr11	4571423	4577820	4574621	ENSG00000171987.1	-	protein_coding	KNOWN	C11orf40	1	4	-0.266269
chr11	4586791	4587905	4587348	ENSG00000226288.1	+	protein_coding	KNOWN	OR52I2	1	1	-0.266269
chr11	4593750	4595013	4594381	ENSG00000232268.5	+	protein_coding	KNOWN	OR52I1	2	3	-0.066706
chr11	4598672	4608259	4603465	ENSG00000167333.12	-	protein_coding	KNOWN	TRIM68	7	7	-0.066706
chr11	4639715	4640838	4640276	ENSG00000197428.2	+	protein_coding	KNOWN	OR51D1	1	1	-0.032704
chr11	4643420	4655488	4649454	ENSG00000180785.8	+	protein_coding	KNOWN	OR51E1	2	2	-0.014372
chr11	4660853	4661763	4661308	ENSG00000180723.6	-	unitary_pseudogene	KNOWN	OR51A9P	1	1	0.007600
chr11	4680171	4697854	4689012	ENSG00000167332.7	-	protein_coding	KNOWN	OR51E2	2	3	-0.237680
chr11	4690761	4691702	4691231	ENSG00000197674.5	-	unprocessed_pseudogene	KNOWN	OR51C1P	1	1	-0.268184
chr11	4704927	4992429	4848678	ENSG00000167346.7	+	protein_coding	KNOWN	MMP26	3	7	-0.298981
chr11	4709569	4710510	4710039	ENSG00000272634.1	+	unprocessed_pseudogene	KNOWN	OR51F5P	1	1	-0.257214
chr11	4718612	4719559	4719085	ENSG00000272664.1	+	unprocessed_pseudogene	KNOWN	OR51C4P	1	1	-0.247983
chr11	4722740	4724171	4723455	ENSG00000271602.1	-	processed_pseudogene	KNOWN	KRT8P49	1	1	-0.247983
chr11	4736178	4737078	4736628	ENSG00000272559.1	-	unprocessed_pseudogene	KNOWN	OR51F3P	1	1	-0.310891
chr11	4752046	4752944	4752495	ENSG00000273051.1	-	unprocessed_pseudogene	KNOWN	OR51F4P	1	1	-0.511349
chr11	4756645	4756797	4756721	ENSG00000201980.1	+	snoRNA	NOVEL	SNORA62	1	1	-0.511349
chr11	4768979	4769917	4769448	ENSG00000188069.4	-	protein_coding	KNOWN	OR51F1	1	1	-0.511349
chr11	4768979	4769938	4769458	ENSG00000280021.1	-	polymorphic_pseudogene	KNOWN	OR51F1	2	1	-0.511349
chr11	4786754	4787705	4787229	ENSG00000176951.6	+	unprocessed_pseudogene	KNOWN	OR51N1P	1	1	-0.183115
chr11	4793778	4795284	4794531	ENSG00000231070.1	-	unprocessed_pseudogene	KNOWN	OR52Y1P	1	2	-0.059126
chr11	4803433	4804380	4803906	ENSG00000176937.9	-	protein_coding	KNOWN	OR52R1	1	1	-0.059126
chr11	4803433	4804380	4803906	ENSG00000279270.1	-	polymorphic_pseudogene	KNOWN	OR52R1	2	1	-0.059126
chr11	4821386	4822414	4821900	ENSG00000176925.6	+	protein_coding	KNOWN	OR51F2	1	1	-0.149714
chr11	4832133	4833072	4832602	ENSG00000197984.3	+	unprocessed_pseudogene	KNOWN	OR51A8P	1	1	-0.455496
chr11	4848237	4849208	4848722	ENSG00000176922.3	-	protein_coding	KNOWN	OR51S1	1	1	-0.455496
chr11	4859656	4860564	4860110	ENSG00000176904.1	-	protein_coding	KNOWN	OR51H1	1	1	-0.194722
chr11	4876557	4877462	4877009	ENSG00000198217.3	+	unprocessed_pseudogene	KNOWN	OR51H2P	1	1	-0.686652
chr11	4881819	4882883	4882351	ENSG00000176900.2	+	protein_coding	KNOWN	OR51T1	2	1	-0.686652
chr11	4889593	4890596	4890094	ENSG00000197023.6	-	unprocessed_pseudogene	KNOWN	OR51A6P	1	1	-0.295489
chr11	4907370	4908308	4907839	ENSG00000176895.8	+	protein_coding	KNOWN	OR51A7	1	1	-0.029472
chr11	4914719	4915663	4915191	ENSG00000176893.4	-	protein_coding	KNOWN	OR51G2	1	1	0.101642
chr11	4923301	4924407	4923854	ENSG00000278870.1	-	polymorphic_pseudogene	KNOWN	OR51G1	2	1	0.101642
chr11	4923374	4924339	4923856	ENSG00000176879.3	-	protein_coding	KNOWN	OR51G1	1	1	0.101642
chr11	4937371	4938294	4937832	ENSG00000227023.1	-	unprocessed_pseudogene	KNOWN	OR51A3P	1	1	-0.275740
chr11	4946159	4947100	4946629	ENSG00000205497.3	-	protein_coding	KNOWN	OR51A4	1	1	-0.275740
chr11	4954772	4955713	4955242	ENSG00000205496.1	-	protein_coding	KNOWN	OR51A2	1	1	-0.648249
chr11	4972943	4973884	4973413	ENSG00000225003.1	-	unprocessed_pseudogene	KNOWN	OR51A5P	1	1	-0.546410
chr11	4998983	4999930	4999456	ENSG00000176798.1	+	protein_coding	KNOWN	OR51L1	1	1	-0.268303
chr11	5015138	5016079	5015608	ENSG00000224300.1	+	unprocessed_pseudogene	KNOWN	OR51P1P	1	1	-0.379513
chr11	5037013	5037951	5037482	ENSG00000230261.1	+	unprocessed_pseudogene	KNOWN	OR52J2P	1	1	-0.074658
chr11	5046526	5047461	5046993	ENSG00000205495.1	+	protein_coding	KNOWN	OR52J3	1	1	-0.074658
chr11	5058650	5059627	5059138	ENSG00000176787.2	-	protein_coding	KNOWN	OR52E2	1	1	-0.183643
chr11	5069572	5070497	5070034	ENSG00000273085.1	+	polymorphic_pseudogene	KNOWN	OR52E1	1	1	-0.384272
chr11	5069572	5070461	5070016	ENSG00000236621.3	+	pseudogene	KNOWN	OR52E1	1	2	-0.377306
chr11	5076130	5077066	5076598	ENSG00000237354.1	-	unprocessed_pseudogene	KNOWN	OR52S1P	1	1	-0.556297
chr11	5092676	5093611	5093143	ENSG00000226157.1	+	unprocessed_pseudogene	KNOWN	OR52E3P	1	1	-0.209010
chr11	5104153	5105084	5104618	ENSG00000203560.3	+	unprocessed_pseudogene	KNOWN	OR52J1P	1	1	-0.209010
chr11	5106062	5107530	5106796	ENSG00000236897.1	-	lincRNA	KNOWN	AC113331.9	1	2	-0.209010
chr11	5120621	5124513	5122567	ENSG00000205494.9	-	transcribed_unprocessed_pseudogene	KNOWN	OR52A4P	3	4	-0.801093
chr11	5131692	5132642	5132167	ENSG00000171944.1	-	protein_coding	KNOWN	OR52A5	1	1	-0.514094
chr11	5151009	5186382	5168695	ENSG00000182070.4	-	protein_coding	KNOWN	OR52A1	2	2	-0.165109
chr11	5170351	5171296	5170823	ENSG00000176752.6	-	unitary_pseudogene	KNOWN	OR51A1P	1	1	-0.065192
chr11	5177714	5178610	5178162	ENSG00000176748.5	-	polymorphic_pseudogene	KNOWN	OR52Z1	1	1	-0.065192
chr11	5199735	5200700	5200217	ENSG00000176742.1	-	protein_coding	KNOWN	OR51V1	1	1	-0.147347
chr11	5205041	5207308	5206174	ENSG00000224091.1	+	antisense	KNOWN	AC104389.16	1	2	-0.147347
chr11	5224448	5224639	5224543	ENSG00000221031.1	-	ribozyme	NOVEL	CoTC_ribozyme	1	1	-0.172836
chr11	5225464	5229395	5227429	ENSG00000244734.3	-	protein_coding	KNOWN	HBB	5	4	-0.172836
chr11	5232678	5235370	5234024	ENSG00000223609.7	-	protein_coding	KNOWN	HBD	4	3	-0.073817
chr11	5241954	5243537	5242745	ENSG00000229988.1	-	transcribed_unprocessed_pseudogene	KNOWN	HBBP1	2	3	-0.073817
chr11	5244554	5245547	5245050	ENSG00000260629.1	-	sense_overlapping	KNOWN	BGLT3	1	1	-0.073817
chr11	5248083	5249892	5248987	ENSG00000213934.6	-	protein_coding	KNOWN	HBG1	2	3	-0.073817
chr11	5248274	5645789	5447031	ENSG00000196565.12	-	protein_coding	KNOWN	HBG2	5	8	-0.123947
chr11	5248449	5249858	5249153	ENSG00000279824.1	+	protein_coding	KNOWN	AC104389.2	1	3	-0.073817
chr11	5253367	5254782	5254074	ENSG00000279346.1	+	protein_coding	KNOWN	AC104389.1	1	3	0.005952
chr11	5268345	5505617	5386981	ENSG00000213931.5	-	protein_coding	KNOWN	HBE1	3	5	-0.198828
chr11	5291761	5292380	5292070	ENSG00000229093.1	-	unprocessed_pseudogene	KNOWN	OR51AB1P	1	1	-0.127974
chr11	5301014	5301996	5301505	ENSG00000183251.3	-	protein_coding	KNOWN	OR51B4	1	1	-0.127974
chr11	5304976	5505652	5405314	ENSG00000167355.7	-	processed_transcript	KNOWN	AC104389.28	4	5	-0.219601
chr11	5314772	5315684	5315228	ENSG00000223735.1	-	unprocessed_pseudogene	KNOWN	OR51B3P	1	1	0.023686
chr11	5323311	5324352	5323831	ENSG00000279012.1	-	polymorphic_pseudogene	KNOWN	OR51B2	2	1	0.023686
chr11	5323359	5324297	5323828	ENSG00000184881.3	-	protein_coding	KNOWN	OR51B2	1	1	0.023686
chr11	5330592	5331360	5330976	ENSG00000236359.1	-	unprocessed_pseudogene	KNOWN	OR51B8P	1	1	-0.107317
chr11	5342586	5343524	5343055	ENSG00000242180.3	-	protein_coding	KNOWN	OR51B5	1	1	-0.107317
chr11	5351508	5352446	5351977	ENSG00000176239.7	+	protein_coding	KNOWN	OR51B6	1	1	-0.031240
chr11	5354692	5355578	5355135	ENSG00000230087.1	+	processed_pseudogene	KNOWN	AC104389.31	1	1	-0.031240
chr11	5362615	5362849	5362732	ENSG00000236248.1	+	processed_pseudogene	KNOWN	AC104389.32	1	1	-0.031240
chr11	5389399	5390379	5389889	ENSG00000184698.4	+	protein_coding	KNOWN	OR51M1	1	1	-0.091035
chr11	5402597	5403547	5403072	ENSG00000184321.1	+	protein_coding	KNOWN	OR51J1	1	1	-0.420343
chr11	5422111	5423206	5422658	ENSG00000167360.4	+	protein_coding	KNOWN	OR51Q1	1	1	-0.468723
chr11	5430653	5431602	5431127	ENSG00000248424.1	-	unitary_pseudogene	KNOWN	OR51K1P	1	1	-0.372219
chr11	5440570	5441514	5441042	ENSG00000167359.8	-	protein_coding	KNOWN	OR51I1	1	1	-0.372219
chr11	5453489	5454427	5453958	ENSG00000187918.4	+	protein_coding	KNOWN	OR51I2	1	1	-0.338312
chr11	5468486	5469422	5468954	ENSG00000230484.2	-	unitary_pseudogene	KNOWN	OR51A10P	1	1	-0.338312
chr11	5488685	5489749	5489217	ENSG00000181609.5	+	protein_coding	KNOWN	OR52D1	1	1	-0.191801
chr11	5507300	5509985	5508642	ENSG00000175520.8	-	protein_coding	KNOWN	UBQLN3	2	2	-0.488783
chr11	5514393	5516705	5515549	ENSG00000175518.6	-	protein_coding	KNOWN	UBQLNL	1	1	0.014409
chr11	5518441	5524955	5521698	ENSG00000224295.2	-	unprocessed_pseudogene	KNOWN	OLFM5P	1	7	0.014409
chr11	5527277	5528174	5527725	ENSG00000249633.1	-	unprocessed_pseudogene	KNOWN	OR52V1P	1	1	0.014409
chr11	5544561	5545523	5545042	ENSG00000181616.8	-	protein_coding	KNOWN	OR52H1	1	1	0.183490
chr11	5551662	5552563	5552112	ENSG00000248553.1	-	unitary_pseudogene	KNOWN	OR52H2P	1	1	-0.080189
chr11	5560967	5561917	5561442	ENSG00000231049.1	+	unprocessed_pseudogene	KNOWN	OR52B5P	1	1	-0.080189
chr11	5566678	5567616	5567147	ENSG00000233646.1	-	unprocessed_pseudogene	KNOWN	OR52T1P	1	1	-0.080189
chr11	5571247	5572192	5571719	ENSG00000229534.1	-	processed_pseudogene	KNOWN	HNRNPA1P53	1	1	-0.409889
chr11	5572322	5624896	5598609	ENSG00000239920.1	-	antisense	KNOWN	AC015691.13	1	4	-0.111600
chr11	5580877	5581884	5581380	ENSG00000187747.2	+	protein_coding	KNOWN	OR52B6	1	1	-0.409889
chr11	5596109	5612958	5604533	ENSG00000121236.19	+	protein_coding	KNOWN	TRIM6	13	9	-0.166441
chr11	5596725	5644398	5620561	ENSG00000258588.3	+	protein_coding	KNOWN	TRIM6-TRIM34	1	14	0.164171
chr11	5619764	5644398	5632081	ENSG00000258659.6	+	protein_coding	KNOWN	TRIM34	4	8	0.283099
chr11	5663557	5938619	5801088	ENSG00000132256.18	-	protein_coding	KNOWN	TRIM5	11	11	-0.250962
chr11	5689689	5737089	5713389	ENSG00000132274.15	+	protein_coding	KNOWN	TRIM22	11	8	0.075590
chr11	5719290	5720212	5719751	ENSG00000232381.1	+	unitary_pseudogene	KNOWN	OR52U1P	1	1	-0.161127
chr11	5726502	5727464	5726983	ENSG00000181109.3	+	unitary_pseudogene	KNOWN	OR52P1P	1	1	-0.161127
chr11	5736517	5737491	5737004	ENSG00000181023.6	+	protein_coding	KNOWN	OR56B1	1	1	-0.086606
chr11	5754693	5755729	5755211	ENSG00000181074.3	+	protein_coding	KNOWN	OR52N4	1	1	-0.386055
chr11	5765096	5766049	5765572	ENSG00000181017.4	+	unprocessed_pseudogene	KNOWN	OR56B2P	1	1	-0.386055
chr11	5777634	5778667	5778150	ENSG00000181009.4	-	protein_coding	KNOWN	OR52N5	1	1	-0.672719
chr11	5787854	5788816	5788335	ENSG00000181001.1	-	protein_coding	KNOWN	OR52N1	1	1	-0.672719
chr11	5800364	5801297	5800830	ENSG00000236965.4	+	unitary_pseudogene	KNOWN	OR52N3P	1	1	-0.524680
chr11	5820314	5821348	5820831	ENSG00000180988.2	+	protein_coding	KNOWN	OR52N2	1	1	-0.023485
chr11	5840928	5841952	5841440	ENSG00000205409.3	-	protein_coding	KNOWN	OR52E6	2	2	-0.424799
chr11	5856674	5857734	5857204	ENSG00000183269.5	-	protein_coding	KNOWN	OR52E8	1	1	-0.582432
chr11	5873960	5874892	5874426	ENSG00000233563.1	+	unprocessed_pseudogene	KNOWN	OR52E7P	1	1	-0.060011
chr11	5884271	5885300	5884785	ENSG00000180974.3	+	protein_coding	KNOWN	OR52E4	1	1	-0.060011
chr11	5900777	5902090	5901433	ENSG00000277932.1	+	protein_coding	KNOWN	OR52E5	1	1	-0.372219
chr11	5903767	5904448	5904107	ENSG00000277514.1	+	unprocessed_pseudogene	KNOWN	OR52Q1P	1	1	-0.372219
chr11	5938751	5944984	5941867	ENSG00000255257.1	+	lincRNA	KNOWN	AC025016.1	1	3	0.099297
chr11	5947340	5948361	5947850	ENSG00000184478.6	+	protein_coding	KNOWN	OR56A3	1	1	0.099297
chr11	5967177	5968494	5967835	ENSG00000188691.5	-	protein_coding	KNOWN	OR56A5	2	2	-0.248499
chr11	5985892	5986985	5986438	ENSG00000183313.4	-	protein_coding	KNOWN	OR52L1	1	1	-0.356213
chr11	5993876	5994995	5994435	ENSG00000254831.1	-	processed_pseudogene	KNOWN	KRT18P58	1	1	0.100870
chr11	6001986	6003194	6002590	ENSG00000183389.4	-	protein_coding	KNOWN	OR56A4	1	1	0.100870
chr11	6016996	6017114	6017055	ENSG00000202147.1	+	rRNA	KNOWN	RNA5SP329	1	1	0.043082
chr11	6026671	6027741	6027206	ENSG00000180934.5	-	protein_coding	KNOWN	OR56A1	1	1	0.043082
chr11	6045807	6046747	6046277	ENSG00000255481.2	-	unprocessed_pseudogene	KNOWN	OR56A7P	1	1	-0.162429
chr11	6057316	6058275	6057795	ENSG00000262980.1	-	unprocessed_pseudogene	KNOWN	OR52L2P	1	1	-0.062585
chr11	6066873	6067786	6067329	ENSG00000234895.1	-	unitary_pseudogene	KNOWN	OR52X1P	1	1	-0.062585
chr11	6107684	6108835	6108259	ENSG00000180919.3	+	protein_coding	KNOWN	OR56B4	1	1	-0.163567
chr11	6108135	6185576	6146855	ENSG00000254444.1	-	sense_overlapping	KNOWN	RP11-290F24.3	1	3	-0.316583
chr11	6128610	6129556	6129083	ENSG00000180913.3	+	unprocessed_pseudogene	KNOWN	OR56B3P	1	1	-0.276934
chr11	6151641	6152549	6152095	ENSG00000180909.2	-	unprocessed_pseudogene	KNOWN	OR52B1P	1	1	-0.229936
chr11	6169330	6170408	6169869	ENSG00000255307.1	-	protein_coding	KNOWN	OR52B2	1	1	-0.245356
chr11	6199146	6200259	6199702	ENSG00000175485.2	+	protein_coding	KNOWN	OR52W1	1	1	0.005952
chr11	6201901	6203253	6202577	ENSG00000267940.1	-	lincRNA	KNOWN	RP11-290F24.6	1	1	0.005952
chr11	6205566	6211132	6208349	ENSG00000180878.2	+	protein_coding	KNOWN	C11orf42	1	3	0.082942
chr11	6211335	6234711	6223023	ENSG00000051009.10	-	protein_coding	KNOWN	FAM160A2	5	12	0.362452
chr11	6234765	6244429	6239597	ENSG00000132259.12	+	protein_coding	KNOWN	CNGA4	2	6	0.276416
chr11	6259736	6272127	6265931	ENSG00000110148.9	+	protein_coding	KNOWN	CCKBR	6	5	0.307215
chr11	6297189	6298606	6297897	ENSG00000270435.1	-	processed_pseudogene	KNOWN	RP11-304C12.4	1	1	0.195614
chr11	6318946	6320647	6319796	ENSG00000170955.9	-	protein_coding	KNOWN	PRKCDBP	4	3	0.315575
chr11	6323554	6324023	6323788	ENSG00000282556.1	+	lincRNA	KNOWN	RP11-304C12.5	1	2	0.315575
chr11	6362799	6365267	6364033	ENSG00000254443.1	+	lincRNA	KNOWN	RP11-304C12.3	2	2	0.500077
chr11	6390431	6394998	6392714	ENSG00000166311.9	+	protein_coding	KNOWN	SMPD1	10	6	0.776835
chr11	6395124	6419414	6407269	ENSG00000166313.18	-	protein_coding	KNOWN	APBB1	24	15	0.803106
chr11	6431049	6442617	6436833	ENSG00000110169.10	-	protein_coding	KNOWN	HPX	13	10	0.633961
chr11	6448613	6474459	6461536	ENSG00000110171.18	-	protein_coding	KNOWN	TRIM3	14	13	0.681912
chr11	6474683	6481479	6478081	ENSG00000132254.12	-	protein_coding	KNOWN	ARFIP2	10	8	0.817817
chr11	6481447	6484679	6483063	ENSG00000132286.11	+	protein_coding	KNOWN	TIMM10B	5	4	0.817817
chr11	6481485	6508978	6495231	ENSG00000265264.5	+	protein_coding	KNOWN	TIMM10B	2	5	0.647905
chr11	6488186	6489377	6488781	ENSG00000254595.1	-	processed_pseudogene	KNOWN	CTD-2010I16.1	1	2	0.817817
chr11	6497260	6593758	6545509	ENSG00000179532.12	+	protein_coding	KNOWN	DNHD1	20	43	0.575225
chr11	6595075	6603620	6599347	ENSG00000132275.10	-	protein_coding	KNOWN	RRP8	5	7	0.662308
chr11	6603642	6604420	6604031	ENSG00000254400.1	-	antisense	KNOWN	RP11-732A19.8	1	2	0.662308
chr11	6603708	6610874	6607291	ENSG00000166333.13	+	protein_coding	KNOWN	ILK	16	13	0.704583
chr11	6606296	6612667	6609481	ENSG00000166337.9	-	protein_coding	KNOWN	TAF10	5	5	0.807294
chr11	6608667	6610135	6609401	ENSG00000254641.1	-	sense_overlapping	KNOWN	RP11-732A19.2	1	3	0.694383
chr11	6612763	6619461	6616112	ENSG00000166340.14	-	protein_coding	KNOWN	TPP1	17	14	1.008525
chr11	6618790	6619764	6619277	ENSG00000255680.1	+	antisense	KNOWN	RP11-732A19.9	1	2	1.008525
chr11	6621323	6655854	6638588	ENSG00000166341.7	-	protein_coding	KNOWN	DCHS1	1	21	0.864088
chr11	6621451	6622322	6621886	ENSG00000255390.1	+	antisense	KNOWN	RP11-732A19.5	1	2	1.008525
chr11	6630603	6635208	6632905	ENSG00000255410.1	+	antisense	KNOWN	RP11-732A19.6	1	3	0.828957
chr11	6680782	6683401	6682091	ENSG00000158042.8	-	protein_coding	KNOWN	MRPL17	4	3	0.304295
chr11	6685891	6686369	6686130	ENSG00000241678.1	-	processed_pseudogene	KNOWN	RP11-732A19.1	1	1	0.304295
chr11	6713536	6746439	6729987	ENSG00000254838.5	-	transcribed_unprocessed_pseudogene	KNOWN	GVINP1	2	2	-0.136119
chr11	6748131	6750324	6749227	ENSG00000254781.1	+	processed_pseudogene	KNOWN	GVINP2	1	1	-0.162981
chr11	6767987	6769055	6768521	ENSG00000188124.2	-	protein_coding	KNOWN	OR2AG2	1	1	-0.125239
chr11	6785017	6786014	6785515	ENSG00000279486.3	+	polymorphic_pseudogene	KNOWN	OR2AG1	2	1	-0.115166
chr11	6785038	6785988	6785513	ENSG00000170803.5	+	protein_coding	KNOWN	OR2AG1	1	1	-0.115166
chr11	6794627	6795783	6795205	ENSG00000184933.4	-	protein_coding	KNOWN	OR6A2	1	1	-0.193165
chr11	6843664	6844666	6844165	ENSG00000254712.1	-	processed_pseudogene	KNOWN	RP11-560B16.5	1	1	-0.245509
chr11	6845652	6846705	6846178	ENSG00000166363.5	+	protein_coding	KNOWN	OR10A5	1	1	-0.245509
chr11	6869693	6870745	6870219	ENSG00000170790.4	+	protein_coding	KNOWN	OR10A2	1	1	-0.120054
chr11	6876625	6877619	6877122	ENSG00000170782.3	+	protein_coding	KNOWN	OR10A4	1	1	-0.020035
chr11	6891490	6892599	6892044	ENSG00000166368.2	-	protein_coding	KNOWN	OR2D2	1	1	-0.310107
chr11	6920974	6922043	6921508	ENSG00000178358.4	+	protein_coding	KNOWN	OR2D3	1	1	-0.385781
chr11	6926404	6984632	6955518	ENSG00000149054.14	+	protein_coding	KNOWN	ZNF215	7	8	-0.087475
chr11	6999318	7020368	7009843	ENSG00000149050.9	-	protein_coding	KNOWN	ZNF214	4	4	0.076021
chr11	7020446	7071308	7045877	ENSG00000158077.4	+	protein_coding	KNOWN	NLRP14	1	12	-0.179194
chr11	7089027	7090900	7089963	ENSG00000170748.6	+	protein_coding	KNOWN	RBMXL2	1	1	-0.297942
chr11	7222933	7230863	7226898	ENSG00000255179.1	+	lincRNA	KNOWN	RP11-324J3.1	1	2	-0.233719
chr11	7234766	7234837	7234801	ENSG00000221703.1	+	miRNA	KNOWN	MIR302E	1	1	-0.151279
chr11	7238778	7469042	7353910	ENSG00000170743.16	+	protein_coding	KNOWN	SYT9	3	9	-0.169988
chr11	7427266	7512515	7469890	ENSG00000251364.6	-	antisense	KNOWN	CTD-2516F10.2	11	8	0.199349
chr11	7485388	7511377	7498382	ENSG00000183801.7	+	protein_coding	KNOWN	OLFML1	5	4	0.103417
chr11	7513298	7657127	7585212	ENSG00000166387.11	+	protein_coding	KNOWN	PPFIBP2	26	24	0.375809
chr11	7568866	7572046	7570456	ENSG00000254864.1	-	antisense	KNOWN	CTD-2516F10.4	1	2	0.489869
chr11	7665100	7677222	7671161	ENSG00000166394.14	-	protein_coding	KNOWN	CYB5R2	14	10	0.342830
chr11	7689438	7706421	7697929	ENSG00000183378.11	-	protein_coding	KNOWN	OVCH2	3	16	0.107573
chr11	7698951	7699393	7699172	ENSG00000275612.1	-	sense_intronic	KNOWN	RP11-35J10.6	1	1	0.099409
chr11	7699562	7699988	7699775	ENSG00000276668.1	-	sense_intronic	KNOWN	RP11-35J10.7	1	1	0.099409
chr11	7704628	7882947	7793787	ENSG00000271758.2	-	lincRNA	KNOWN	RP11-35J10.5	1	6	-0.221558
chr11	7705288	7709517	7707402	ENSG00000254707.1	+	antisense	KNOWN	RP11-35J10.4	1	3	0.099409
chr11	7728400	7729337	7728868	ENSG00000176716.4	+	unprocessed_pseudogene	KNOWN	OR10AB1P	1	1	-0.085651
chr11	7745990	7746906	7746448	ENSG00000227892.1	+	unprocessed_pseudogene	KNOWN	OR5P4P	1	1	-0.385486
chr11	7754393	7905955	7830174	ENSG00000254951.7	-	sense_overlapping	KNOWN	RP11-494M8.4	3	8	-0.184626
chr11	7772890	7773814	7773352	ENSG00000166408.4	-	unprocessed_pseudogene	KNOWN	OR5P1P	1	1	-0.091720
chr11	7783697	7784407	7784052	ENSG00000241008.1	+	processed_pseudogene	KNOWN	RP11-494M8.1	1	1	-0.091720
chr11	7795905	7796973	7796439	ENSG00000183303.2	-	protein_coding	KNOWN	OR5P2	1	1	-0.147474
chr11	7825037	7825972	7825504	ENSG00000182334.1	-	protein_coding	KNOWN	OR5P3	1	1	-0.463971
chr11	7848700	7849626	7849163	ENSG00000170688.4	+	unprocessed_pseudogene	KNOWN	OR5E1P	1	1	-0.323046
chr11	7889182	7889279	7889230	ENSG00000252769.1	-	snRNA	KNOWN	RNU6-943P	1	1	0.057226
chr11	7927633	7928662	7928147	ENSG00000279000.1	-	polymorphic_pseudogene	KNOWN	OR10A6	2	1	0.275058
chr11	7927718	7928662	7928190	ENSG00000175393.3	-	protein_coding	KNOWN	OR10A6	1	1	0.275058
chr11	7938534	7939594	7939064	ENSG00000170683.5	-	protein_coding	KNOWN	OR10A3	1	1	-0.284313
chr11	7959424	7965426	7962425	ENSG00000182261.3	-	protein_coding	KNOWN	NLRP10	2	2	0.164343
chr11	7970251	8001862	7986056	ENSG00000175390.12	+	protein_coding	KNOWN	EIF3F	8	10	0.435727
chr11	7977481	7977708	7977594	ENSG00000254642.1	+	processed_pseudogene	KNOWN	COX6CP5	1	1	0.546787
chr11	8011278	8016489	8013883	ENSG00000255420.1	-	antisense	KNOWN	CASC23	1	3	0.418136
chr11	8019244	8106112	8062678	ENSG00000166402.8	+	protein_coding	KNOWN	TUB	3	13	0.437405
chr11	8035446	8039718	8037582	ENSG00000254921.1	-	antisense	KNOWN	RP11-236J17.6	2	2	0.524659
chr11	8060038	8069373	8064705	ENSG00000248332.6	+	sense_intronic	KNOWN	TUB-AS1	2	4	0.221683
chr11	8075573	8077781	8076677	ENSG00000279391.1	-	TEC	KNOWN	RP11-236J17.7	1	1	0.348173
chr11	8106093	8169055	8137574	ENSG00000166405.14	-	protein_coding	KNOWN	RIC3	12	7	-0.090104
chr11	8169167	8178903	8174035	ENSG00000246820.2	+	lincRNA	KNOWN	RP11-379P15.1	1	3	-0.015245
chr11	8224304	8268716	8246510	ENSG00000166407.13	-	protein_coding	KNOWN	LMO1	4	4	0.339197
chr11	8391868	8594289	8493078	ENSG00000130413.15	-	protein_coding	KNOWN	STK33	17	14	-0.275803
chr11	8555016	8555146	8555081	ENSG00000252778.1	+	scaRNA	NOVEL	SCARNA20	1	1	0.019060
chr11	8612037	8671866	8641951	ENSG00000166436.15	-	protein_coding	KNOWN	TRIM66	8	22	0.385123
chr11	8679089	8680913	8680001	ENSG00000254900.1	+	antisense	KNOWN	RP11-152H18.4	1	2	0.321689
chr11	8682411	8714759	8698585	ENSG00000166441.12	+	protein_coding	KNOWN	RPL27A	12	5	0.649970
chr11	8684204	8684314	8684259	ENSG00000280884.1	+	miRNA	NOVEL	AC091053.1	1	1	0.321689
chr11	8684227	8684356	8684291	ENSG00000200983.1	+	snoRNA	KNOWN	SNORA45A	1	1	0.321689
chr11	8685410	8685529	8685469	ENSG00000281902.1	+	miRNA	NOVEL	AC091053.2	1	1	0.321689
chr11	8685439	8685569	8685504	ENSG00000212607.1	+	snoRNA	KNOWN	SNORA45B	1	1	0.321689
chr11	8693351	8910951	8802151	ENSG00000166444.17	-	protein_coding	KNOWN	ST5	62	23	0.577234
chr11	8693357	8696607	8694982	ENSG00000254665.1	+	antisense	KNOWN	RP11-152H18.3	1	2	0.693074
chr11	8768778	8810231	8789504	ENSG00000255159.1	+	antisense	KNOWN	RP11-318C2.1	3	3	0.612195
chr11	8845263	8845358	8845310	ENSG00000252905.1	+	rRNA	KNOWN	RNA5SP330	1	1	0.393936
chr11	8877417	8877518	8877467	ENSG00000202276.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.433460
chr11	8911139	8920084	8915611	ENSG00000166452.11	+	protein_coding	KNOWN	AKIP1	11	6	0.289722
chr11	8920076	8933006	8926541	ENSG00000176029.13	-	protein_coding	KNOWN	C11orf16	6	7	0.361028
chr11	8937579	8938211	8937895	ENSG00000176009.3	-	protein_coding	KNOWN	ASCL3	1	1	0.596336
chr11	8943380	8943467	8943423	ENSG00000223080.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.596336
chr11	8947294	8965011	8956152	ENSG00000175348.10	-	protein_coding	KNOWN	TMEM9B	5	5	0.379458
chr11	8964675	8977527	8971101	ENSG00000254860.5	+	antisense	KNOWN	TMEM9B-AS1	3	5	0.561752
chr11	8980576	9004049	8992312	ENSG00000175352.10	-	protein_coding	KNOWN	NRIP3	5	7	0.555711
chr11	9004162	9065154	9034658	ENSG00000253973.2	+	antisense	KNOWN	RP11-467K18.2	2	3	0.522905
chr11	9020391	9138114	9079252	ENSG00000175356.12	-	protein_coding	KNOWN	SCUBE2	13	22	0.409894
chr11	9090312	9090379	9090345	ENSG00000264984.1	-	miRNA	KNOWN	MIR5691	1	1	0.346806
chr11	9094377	9095890	9095133	ENSG00000213538.5	+	processed_pseudogene	KNOWN	KRT8P41	1	1	0.346806
chr11	9138825	9265390	9202107	ENSG00000184014.7	-	protein_coding	KNOWN	DENND5A	16	23	0.433352
chr11	9242448	9245509	9243978	ENSG00000255097.1	-	sense_intronic	KNOWN	RP11-5L12.1	1	2	0.310764
chr11	9279532	9279816	9279674	ENSG00000273725.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.706702
chr11	9280654	9314780	9297717	ENSG00000166471.10	-	protein_coding	KNOWN	TMEM41B	7	8	0.337090
chr11	9311284	9311689	9311486	ENSG00000254884.1	-	processed_pseudogene	KNOWN	PRR13P2	1	1	0.276075
chr11	9384622	9448126	9416374	ENSG00000205339.9	+	protein_coding	KNOWN	IPO7	8	25	0.382772
chr11	9428773	9428954	9428863	ENSG00000201998.1	+	snoRNA	KNOWN	SNORA23	1	1	0.443464
chr11	9430356	9433486	9431921	ENSG00000254397.1	-	antisense	KNOWN	CTD-2371O3.2	1	2	0.131958
chr11	9434165	9434251	9434208	ENSG00000278792.1	+	miRNA	NOVEL	AC132192.1	1	1	0.131958
chr11	9459556	9460702	9460129	ENSG00000268403.2	-	antisense	KNOWN	CTD-2371O3.3	1	1	0.556660
chr11	9460319	9528524	9494421	ENSG00000166478.9	+	protein_coding	KNOWN	ZNF143	18	16	0.393659
chr11	9520689	9520799	9520744	ENSG00000277962.1	+	miRNA	NOVEL	AC127030.1	1	1	0.068145
chr11	9573681	9593457	9583569	ENSG00000166483.10	+	protein_coding	KNOWN	WEE1	8	11	0.317959
chr11	9578028	9578131	9578079	ENSG00000238387.1	+	snoRNA	NOVEL	snoU13	1	1	0.320469
chr11	9606142	9606609	9606375	ENSG00000243964.1	+	processed_pseudogene	KNOWN	RPL23AP65	1	1	0.306117
chr11	9631008	9631359	9631183	ENSG00000255463.1	-	processed_pseudogene	KNOWN	RP11-16F15.4	1	1	0.462360
chr11	9660438	9660920	9660679	ENSG00000239470.3	+	processed_pseudogene	KNOWN	RP11-16F15.2	1	1	0.366614
chr11	9664077	9752991	9708534	ENSG00000133789.14	+	protein_coding	KNOWN	SWAP70	7	12	0.221820
chr11	9680924	9681238	9681081	ENSG00000201564.1	+	misc_RNA	KNOWN	RN7SKP50	1	1	0.038125
chr11	9754770	9759533	9757151	ENSG00000245522.2	-	lincRNA	KNOWN	RP11-540A21.2	2	3	0.901889
chr11	9758292	9811319	9784805	ENSG00000246273.6	+	antisense	KNOWN	SBF2-AS1	6	4	0.692488
chr11	9778667	10294207	10036437	ENSG00000133812.14	-	protein_coding	KNOWN	SBF2	15	40	0.228857
chr11	9839143	9929263	9884203	ENSG00000255476.1	+	antisense	KNOWN	RP11-1H15.2	1	3	0.227329
chr11	9843815	9843876	9843845	ENSG00000252568.1	-	snRNA	KNOWN	RNU7-28P	1	1	0.676954
chr11	9958744	9959790	9959267	ENSG00000254765.1	-	processed_pseudogene	KNOWN	RP11-1H15.1	1	1	0.191527
chr11	10149192	10165109	10157150	ENSG00000254865.1	+	antisense	KNOWN	RP11-748C4.1	1	2	0.250366
chr11	10272052	10272259	10272155	ENSG00000254719.1	-	processed_pseudogene	KNOWN	RP11-351I24.3	1	1	0.128061
chr11	10302657	10303704	10303180	ENSG00000254554.1	-	antisense	KNOWN	RP11-351I24.1	1	2	0.361880
chr11	10304680	10307397	10306038	ENSG00000148926.9	+	protein_coding	KNOWN	ADM	8	5	0.361880
chr11	10308313	10507579	10407946	ENSG00000133805.15	+	protein_coding	KNOWN	AMPD3	18	15	0.531193
chr11	10399192	10399317	10399254	ENSG00000221574.1	-	snRNA	KNOWN	RNU6ATAC33P	1	1	0.736804
chr11	10494948	10495056	10495002	ENSG00000281108.1	+	miRNA	NOVEL	AC021914.1	1	1	0.800418
chr11	10507887	10509189	10508538	ENSG00000255823.2	-	protein_coding	KNOWN	MTRNR2L8	1	1	0.800418
chr11	10511678	10541230	10526454	ENSG00000110315.6	-	protein_coding	KNOWN	RNF141	5	6	0.091874
chr11	10541272	10599932	10570602	ENSG00000177112.7	+	antisense	KNOWN	MRVI1-AS1	3	5	0.285753
chr11	10556966	10611689	10584327	ENSG00000133800.8	-	protein_coding	KNOWN	LYVE1	4	6	0.354458
chr11	10573091	10693988	10633539	ENSG00000072952.18	-	protein_coding	KNOWN	MRVI1	17	21	0.514961
chr11	10725903	10726004	10725953	ENSG00000206858.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.510821
chr11	10750987	10779743	10765365	ENSG00000198730.7	+	protein_coding	KNOWN	CTR9	5	25	0.341206
chr11	10783313	10801625	10792469	ENSG00000255125.1	+	antisense	KNOWN	RP11-685M7.5	1	3	0.487313
chr11	10797050	10809110	10803080	ENSG00000110321.15	-	protein_coding	KNOWN	EIF4G2	31	22	0.665177
chr11	10801467	10801608	10801537	ENSG00000238622.1	-	snoRNA	KNOWN	SNORD97	1	1	0.665177
chr11	10809297	10822931	10816114	ENSG00000246308.1	+	antisense	KNOWN	RP11-685M7.3	1	3	0.413477
chr11	10812074	10858796	10835435	ENSG00000236287.7	-	protein_coding	KNOWN	ZBED5	10	5	0.276364
chr11	10858259	10906802	10882530	ENSG00000247271.6	+	antisense	KNOWN	ZBED5-AS1	3	3	0.200730
chr11	10884885	10899322	10892103	ENSG00000250041.2	-	lincRNA	KNOWN	CTD-2003C8.2	2	2	0.272522
chr11	11117854	11183611	11150732	ENSG00000254401.1	+	lincRNA	KNOWN	RP11-179A10.1	1	7	0.007495
chr11	11135482	11137658	11136570	ENSG00000254957.1	+	processed_pseudogene	KNOWN	RP11-179A10.2	1	2	-0.244057
chr11	11182107	11182413	11182260	ENSG00000270897.1	-	processed_pseudogene	KNOWN	RP11-179A10.3	1	1	0.335758
chr11	11239759	11240280	11240019	ENSG00000255123.1	+	processed_pseudogene	KNOWN	MTND5P21	1	1	0.131520
chr11	11243188	11243715	11243451	ENSG00000255260.1	-	lincRNA	KNOWN	CTD-3224I3.3	1	2	0.131520
chr11	11270876	11622005	11446440	ENSG00000110328.5	-	protein_coding	KNOWN	GALNT18	2	11	0.372244
chr11	11351942	11353357	11352649	ENSG00000254598.2	-	protein_coding	KNOWN	CSNK2A3	1	1	0.408019
chr11	11352426	11353307	11352866	ENSG00000255351.1	+	antisense	KNOWN	RP11-567I13.1	1	2	0.408019
chr11	11570084	11573782	11571933	ENSG00000255462.1	+	antisense	KNOWN	RP11-483L5.1	1	2	0.302889
chr11	11656651	11656722	11656686	ENSG00000266645.1	-	miRNA	KNOWN	MIR4299	1	1	-0.010819
chr11	11725332	11726702	11726017	ENSG00000280288.1	-	TEC	KNOWN	RP11-756D7.2	1	1	-0.044787
chr11	11759101	11759433	11759267	ENSG00000255309.1	-	processed_pseudogene	KNOWN	RP11-756D7.1	1	1	0.054321
chr11	11783030	11783115	11783072	ENSG00000278645.1	-	miRNA	NOVEL	AC104383.1	1	1	0.155495
chr11	11783135	11783222	11783178	ENSG00000278529.1	-	miRNA	KNOWN	MIR8070	1	1	0.155495
chr11	11841423	11959323	11900373	ENSG00000170242.17	+	protein_coding	KNOWN	USP47	11	29	-0.099337
chr11	11856490	11856859	11856674	ENSG00000255492.1	-	processed_pseudogene	KNOWN	CTD-2381F24.1	1	1	0.074181
chr11	11963106	12009769	11986437	ENSG00000050165.17	-	protein_coding	KNOWN	DKK3	16	8	0.699040
chr11	12030875	12061785	12046330	ENSG00000254486.1	+	lincRNA	KNOWN	RP13-631K18.2	1	2	0.389896
chr11	12066929	12073014	12069971	ENSG00000254991.1	+	lincRNA	KNOWN	RP13-631K18.3	1	2	0.575541
chr11	12084823	12084935	12084879	ENSG00000281672.1	-	miRNA	NOVEL	AC124276.1	1	1	0.618061
chr11	12086891	12089441	12088166	ENSG00000255400.1	+	lincRNA	KNOWN	RP13-631K18.5	1	2	0.618061
chr11	12094008	12263789	12178898	ENSG00000133816.13	+	protein_coding	KNOWN	MICAL2	31	28	0.536746
chr11	12163683	12163767	12163725	ENSG00000275373.1	+	miRNA	KNOWN	MIR6124	1	1	0.540582
chr11	12261426	12263173	12262299	ENSG00000254680.1	-	antisense	KNOWN	RP11-265D17.2	1	2	0.252100
chr11	12276080	12359144	12317612	ENSG00000133808.4	+	protein_coding	KNOWN	MICALCL	3	9	0.237182
chr11	12303533	12308216	12305874	ENSG00000254983.1	+	sense_intronic	KNOWN	RP11-573E11.2	1	2	0.420318
chr11	12344767	12344861	12344814	ENSG00000264283.1	+	miRNA	NOVEL	AC025300.1	1	1	-0.022872
chr11	12377185	12530801	12453993	ENSG00000197702.11	+	protein_coding	KNOWN	PARVA	6	13	0.326918
chr11	12538083	12540967	12539525	ENSG00000254847.1	-	lincRNA	KNOWN	RP11-51B23.3	1	2	0.530113
chr11	12674591	12944483	12809537	ENSG00000187079.14	+	protein_coding	KNOWN	TEAD1	7	13	0.330760
chr11	12822435	12823667	12823051	ENSG00000254688.1	-	antisense	KNOWN	RP11-47J17.3	1	2	0.355026
chr11	12848795	12849433	12849114	ENSG00000255067.1	+	sense_intronic	KNOWN	RP11-47J17.1	1	2	0.083909
chr11	12904813	12904893	12904853	ENSG00000280762.1	-	miRNA	NOVEL	AC013549.1	1	1	0.492775
chr11	12904817	12904988	12904902	ENSG00000252329.1	-	scaRNA	NOVEL	SCARNA16	1	1	0.492775
chr11	12921186	12922925	12922055	ENSG00000203258.3	-	antisense	KNOWN	RP11-47J17.2	1	2	0.205521
chr11	12961842	12989548	12975695	ENSG00000251381.7	-	lincRNA	KNOWN	LINC00958	7	5	0.016738
chr11	12963640	12963691	12963665	ENSG00000266625.1	+	miRNA	NOVEL	AC084859.1	1	1	-0.060907
chr11	13001090	13009159	13005124	ENSG00000254670.1	-	lincRNA	KNOWN	CTC-497E21.3	1	2	-0.564054
chr11	13009577	13012106	13010841	ENSG00000189431.7	+	protein_coding	KNOWN	RASSF10	1	1	-0.064621
chr11	13054615	13134839	13094727	ENSG00000255558.1	-	lincRNA	KNOWN	CTC-497E21.5	1	2	0.056864
chr11	13152200	13152348	13152274	ENSG00000255018.1	+	processed_pseudogene	KNOWN	RP11-413N13.1	1	1	0.051803
chr11	13276652	13387266	13331959	ENSG00000133794.17	+	protein_coding	KNOWN	ARNTL	21	20	0.265006
chr11	13353208	13353523	13353365	ENSG00000222162.1	+	misc_RNA	KNOWN	RN7SKP151	1	1	0.348685
chr11	13388001	13463297	13425649	ENSG00000148925.10	-	protein_coding	KNOWN	BTBD10	11	9	-0.096006
chr11	13478333	13479037	13478685	ENSG00000254583.1	+	processed_pseudogene	KNOWN	RP11-15D14.1	1	1	-0.026653
chr11	13488612	13489390	13489001	ENSG00000255401.1	+	unprocessed_pseudogene	KNOWN	RP11-15D14.2	1	2	-0.026653
chr11	13492055	13496181	13494118	ENSG00000152266.6	-	protein_coding	KNOWN	PTH	2	3	-0.315512
chr11	13610363	13610771	13610567	ENSG00000228901.3	-	processed_pseudogene	KNOWN	HMGN2P36	1	1	-0.422581
chr11	13668670	13732346	13700508	ENSG00000197601.12	+	protein_coding	KNOWN	FAR1	6	12	-0.144355
chr11	13669327	13670149	13669738	ENSG00000254791.1	+	sense_intronic	KNOWN	FAR1-IT1	1	2	-0.310636
chr11	13685499	13685656	13685577	ENSG00000240454.1	-	processed_pseudogene	KNOWN	RPL39P26	1	1	-0.002957
chr11	13686550	13686658	13686604	ENSG00000200685.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.002957
chr11	13756027	13757560	13756793	ENSG00000255075.1	+	processed_pseudogene	KNOWN	CENPUP1	1	2	0.000493
chr11	13758111	13758345	13758228	ENSG00000255088.1	-	processed_pseudogene	KNOWN	RP11-23B7.4	1	1	0.000493
chr11	13785390	13848002	13816696	ENSG00000255411.1	+	lincRNA	KNOWN	RP11-98J9.1	1	3	-0.466376
chr11	13826843	13879499	13853171	ENSG00000254927.1	-	lincRNA	KNOWN	RP11-98J9.2	1	2	-0.271380
chr11	13844862	13870616	13857739	ENSG00000254930.1	-	lincRNA	KNOWN	RP11-98J9.3	1	4	-0.164649
chr11	13907484	13907590	13907537	ENSG00000201856.1	-	rRNA	KNOWN	RNA5SP331	1	1	-0.020035
chr11	13921450	13924863	13923156	ENSG00000254438.1	-	lincRNA	KNOWN	RP11-231N3.1	1	2	-0.545438
chr11	13962689	14267884	14115286	ENSG00000262655.3	+	protein_coding	KNOWN	SPON1	2	16	-0.109343
chr11	13977938	13978043	13977990	ENSG00000277787.1	+	miRNA	NOVEL	AC074191.1	1	1	0.099854
chr11	14134986	14135100	14135043	ENSG00000212365.1	+	rRNA	KNOWN	RNA5SP332	1	1	-0.185303
chr11	14262846	14273691	14268268	ENSG00000254418.1	-	antisense	KNOWN	RP11-21L19.1	1	2	0.226471
chr11	14277926	14364506	14321216	ENSG00000133818.12	-	protein_coding	KNOWN	RRAS2	12	9	0.127791
chr11	14440787	14441677	14441232	ENSG00000255074.1	+	processed_pseudogene	KNOWN	RP11-140L24.3	1	2	0.417762
chr11	14443440	14500027	14471733	ENSG00000129083.12	-	protein_coding	KNOWN	COPB1	12	22	0.169479
chr11	14478892	14478953	14478922	ENSG00000251991.1	+	snRNA	KNOWN	RNU7-49P	1	1	0.100307
chr11	14493783	14520344	14507063	ENSG00000256206.2	-	protein_coding	KNOWN	RP11-140L24.4	1	12	-0.044862
chr11	14504874	14643635	14574254	ENSG00000129084.17	-	protein_coding	KNOWN	PSMA1	14	11	-0.123431
chr11	14643723	14872044	14757883	ENSG00000152270.8	+	protein_coding	KNOWN	PDE3B	5	16	-0.351753
chr11	14673606	14674555	14674080	ENSG00000255040.1	-	processed_pseudogene	KNOWN	RP11-677N16.1	1	1	-0.443218
chr11	14877440	14892252	14884846	ENSG00000186104.10	-	protein_coding	KNOWN	CYP2R1	10	6	-0.559532
chr11	14904997	15082342	14993669	ENSG00000175868.13	+	protein_coding	KNOWN	CALCB	3	10	-0.193180
chr11	14907518	14907986	14907752	ENSG00000253179.1	+	unprocessed_pseudogene	KNOWN	CALCP	1	2	0.019388
chr11	14966668	14972354	14969511	ENSG00000110680.12	-	protein_coding	KNOWN	CALCA	6	6	-0.118541
chr11	14987671	14988694	14988182	ENSG00000250640.2	-	unprocessed_pseudogene	KNOWN	OR7E41P	1	1	0.117987
chr11	15112424	15247208	15179816	ENSG00000188487.11	+	protein_coding	KNOWN	INSC	8	13	0.139006
chr11	15378531	15378615	15378573	ENSG00000276762.1	+	miRNA	NOVEL	AC105179.1	1	1	-0.496377
chr11	15481808	15481893	15481850	ENSG00000253072.1	-	snoRNA	NOVEL	snoMBII-202	1	1	-0.503313
chr11	15552855	15591098	15571976	ENSG00000254946.1	+	lincRNA	KNOWN	RP11-531H8.1	1	5	-0.157550
chr11	15572023	15622391	15597207	ENSG00000254789.1	-	lincRNA	KNOWN	RP11-531H8.2	1	2	-0.004449
chr11	15643885	15705368	15674626	ENSG00000254695.1	+	lincRNA	KNOWN	RP11-396O20.1	1	3	0.005711
chr11	15701963	15758898	15730430	ENSG00000254645.1	-	lincRNA	KNOWN	RP11-396O20.2	1	9	-0.049394
chr11	15910957	15927443	15919200	ENSG00000254661.2	+	lincRNA	KNOWN	RP11-222N13.1	1	4	0.023279
chr11	15966449	16739591	16353020	ENSG00000110693.15	-	protein_coding	KNOWN	SOX6	17	16	-0.358305
chr11	15969533	15969621	15969577	ENSG00000274140.1	-	miRNA	KNOWN	MIR6073	1	1	0.116938
chr11	16023190	16031515	16027352	ENSG00000254878.1	+	antisense	KNOWN	CTD-3096P4.1	1	2	-0.235681
chr11	16124316	16124396	16124356	ENSG00000221556.1	+	miRNA	NOVEL	AC103794.1	1	1	-0.421269
chr11	16484084	16484671	16484377	ENSG00000213785.3	-	processed_pseudogene	KNOWN	RP11-449L13.2	1	1	-0.308546
chr11	16576851	16577135	16576993	ENSG00000241943.2	+	misc_RNA	KNOWN	RN7SL188P	1	1	-0.442666
chr11	16613132	16756881	16685006	ENSG00000110696.9	+	protein_coding	KNOWN	C11orf58	10	6	-0.185416
chr11	16778295	17014443	16896369	ENSG00000166689.14	-	protein_coding	KNOWN	PLEKHA7	17	27	0.073756
chr11	16842253	16842587	16842420	ENSG00000199883.1	+	misc_RNA	KNOWN	RN7SKP90	1	1	0.060456
chr11	16974693	16975013	16974853	ENSG00000244398.1	-	processed_pseudogene	KNOWN	RP11-466H18.1	1	1	0.156122
chr11	17007878	17007968	17007923	ENSG00000266493.1	-	miRNA	NOVEL	AC116533.3	1	1	-0.138178
chr11	17013998	17053024	17033511	ENSG00000184669.7	+	transcribed_unprocessed_pseudogene	KNOWN	OR7E14P	2	2	-0.045621
chr11	17054912	17055007	17054959	ENSG00000264378.1	+	miRNA	NOVEL	AC116533.2	1	1	-0.011438
chr11	17073952	17074035	17073993	ENSG00000221322.1	+	miRNA	NOVEL	AC116533.1	1	1	0.316958
chr11	17074389	17077787	17076088	ENSG00000110700.6	-	protein_coding	KNOWN	RPS13	10	6	0.316958
chr11	17074654	17074744	17074699	ENSG00000272034.1	-	snoRNA	KNOWN	SNORD14A	1	1	0.316958
chr11	17075779	17075868	17075823	ENSG00000201403.1	-	snoRNA	KNOWN	SNORD14B	1	1	0.316958
chr11	17077730	17207983	17142856	ENSG00000011405.13	-	protein_coding	KNOWN	PIK3C2A	5	32	0.074383
chr11	17092784	17092888	17092836	ENSG00000278353.1	-	miRNA	NOVEL	AC116533.4	1	1	0.108575
chr11	17115652	17115763	17115707	ENSG00000201586.1	-	snRNA	KNOWN	RNU6-593P	1	1	-0.167652
chr11	17137976	17138265	17138120	ENSG00000240808.1	-	processed_pseudogene	KNOWN	CTD-3236F5.1	1	1	0.034767
chr11	17193489	17194308	17193898	ENSG00000213779.4	+	processed_pseudogene	KNOWN	RP11-452G18.1	1	2	0.273104
chr11	17208153	17349974	17279063	ENSG00000070081.15	+	protein_coding	KNOWN	NUCB2	20	15	0.142088
chr11	17228279	17229151	17228715	ENSG00000197149.5	+	processed_pseudogene	KNOWN	RP11-452G18.2	1	1	0.504730
chr11	17351726	17377341	17364533	ENSG00000188211.8	+	protein_coding	KNOWN	NCR3LG1	2	6	0.110875
chr11	17380649	17383531	17382090	ENSG00000260196.1	+	antisense	KNOWN	RP1-239B22.5	1	1	0.068659
chr11	17385859	17389331	17387595	ENSG00000187486.5	-	protein_coding	KNOWN	KCNJ11	5	3	0.068659
chr11	17392885	17476845	17434865	ENSG00000006071.11	-	protein_coding	KNOWN	ABCC8	20	39	0.328951
chr11	17435672	17436181	17435926	ENSG00000255035.2	-	processed_pseudogene	KNOWN	SDHCP4	1	1	0.318627
chr11	17493895	17544416	17519155	ENSG00000006611.15	-	protein_coding	KNOWN	USH1C	11	27	0.346208
chr11	17547373	17647150	17597261	ENSG00000188162.10	+	protein_coding	KNOWN	OTOG	6	56	0.198024
chr11	17695022	17697471	17696246	ENSG00000254586.1	+	lincRNA	KNOWN	RP11-358H18.3	2	3	-0.079775
chr11	17695267	17696940	17696103	ENSG00000255335.1	-	antisense	KNOWN	RP11-358H18.2	1	2	-0.079775
chr11	17719568	17722131	17720849	ENSG00000129152.3	+	protein_coding	KNOWN	MYOD1	1	3	0.160056
chr11	17734812	17783055	17758933	ENSG00000129159.6	+	protein_coding	KNOWN	KCNC1	4	4	0.439556
chr11	17788048	18013162	17900605	ENSG00000129158.10	-	protein_coding	KNOWN	SERGEF	23	12	-0.009608
chr11	18000542	18022931	18011736	ENSG00000255448.1	-	processed_transcript	KNOWN	RP1-59M18.2	1	6	0.095389
chr11	18017564	18042426	18029995	ENSG00000129167.9	-	protein_coding	KNOWN	TPH1	4	10	-0.229025
chr11	18069935	18106091	18088013	ENSG00000166788.9	-	protein_coding	KNOWN	SAAL1	15	12	-0.063406
chr11	18106583	18106841	18106712	ENSG00000255254.1	+	processed_pseudogene	KNOWN	HIGD1AP5	1	1	-0.177004
chr11	18112472	18116132	18114302	ENSG00000166787.3	-	transcribed_unprocessed_pseudogene	KNOWN	SAA3P	2	3	0.083059
chr11	18120955	18138480	18129717	ENSG00000179826.6	+	protein_coding	KNOWN	MRGPRX3	3	3	0.087382
chr11	18140186	18189495	18164840	ENSG00000255470.1	-	lincRNA	KNOWN	RP11-113D6.6	1	2	-0.115777
chr11	18153277	18154255	18153766	ENSG00000254857.1	+	processed_pseudogene	KNOWN	RP11-113D6.3	1	1	-0.203464
chr11	18172837	18197348	18185092	ENSG00000179817.4	+	protein_coding	KNOWN	MRGPRX4	2	2	-0.164100
chr11	18189000	18189621	18189310	ENSG00000255138.1	+	processed_pseudogene	KNOWN	GLTPP1	1	1	-0.130401
chr11	18196657	18197337	18196997	ENSG00000254546.1	+	processed_pseudogene	KNOWN	RP11-113D6.9	1	1	-0.242798
chr11	18209138	18214562	18211850	ENSG00000189332.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-113D6.10	4	3	-0.246870
chr11	18231349	18236893	18234121	ENSG00000148965.9	-	protein_coding	KNOWN	SAA4	1	4	-0.272672
chr11	18231423	18248635	18240029	ENSG00000255071.3	-	protein_coding	KNOWN	SAA2-SAA4	1	6	-0.272672
chr11	18239223	18248643	18243933	ENSG00000134339.8	-	protein_coding	KNOWN	SAA2	6	5	-0.272672
chr11	18248389	18248506	18248447	ENSG00000200336.1	-	rRNA	KNOWN	RNA5SP333	1	1	-0.272672
chr11	18261982	18263091	18262536	ENSG00000212789.4	+	processed_pseudogene	KNOWN	ST13P5	1	1	0.279270
chr11	18266174	18269977	18268075	ENSG00000173432.10	+	protein_coding	KNOWN	SAA1	3	5	0.279270
chr11	18266393	18266510	18266451	ENSG00000201695.1	+	rRNA	KNOWN	RNA5SP334	1	1	0.279270
chr11	18278668	18322198	18300433	ENSG00000110756.17	-	protein_coding	KNOWN	HPS5	11	23	0.270636
chr11	18322295	18367044	18344669	ENSG00000110768.11	+	protein_coding	KNOWN	GTF2H1	16	16	0.138726
chr11	18387787	18387860	18387823	ENSG00000264603.1	+	miRNA	KNOWN	MIR3159	1	1	0.516679
chr11	18394388	18408425	18401406	ENSG00000134333.13	+	protein_coding	KNOWN	LDHA	25	8	0.482782
chr11	18405609	18406731	18406170	ENSG00000256006.1	+	sense_intronic	KNOWN	AC084117.3	1	2	0.482782
chr11	18412307	18452058	18432182	ENSG00000166796.11	+	protein_coding	KNOWN	LDHC	10	8	-0.059433
chr11	18450112	18450868	18450490	ENSG00000256734.1	-	processed_pseudogene	KNOWN	RP11-613F22.7	1	1	0.266826
chr11	18455824	18479600	18467712	ENSG00000166800.9	+	protein_coding	KNOWN	LDHAL6A	3	8	0.192906
chr11	18468336	18527232	18497784	ENSG00000074319.12	-	protein_coding	KNOWN	TSG101	12	10	0.203079
chr11	18490243	18490955	18490599	ENSG00000256464.1	-	processed_pseudogene	KNOWN	YWHABP2	1	1	0.258184
chr11	18507608	18508820	18508214	ENSG00000256588.1	-	sense_intronic	KNOWN	RP11-613F22.8	1	2	0.258184
chr11	18511043	18511475	18511259	ENSG00000256361.1	-	processed_pseudogene	KNOWN	RP11-613F22.6	1	1	0.271440
chr11	18529609	18588747	18559178	ENSG00000151116.16	-	protein_coding	KNOWN	UEVLD	13	12	0.156645
chr11	18538885	18539189	18539037	ENSG00000274589.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.052679
chr11	18595459	18599683	18597571	ENSG00000256282.1	-	transcribed_processed_pseudogene	KNOWN	RP11-504G3.4	3	3	0.308616
chr11	18599787	18610255	18605021	ENSG00000247595.3	+	protein_coding	KNOWN	SPTY2D1-AS1	5	5	0.314488
chr11	18601882	18602649	18602265	ENSG00000279837.1	+	TEC	KNOWN	RP11-504G3.2	1	1	0.308616
chr11	18606401	18634791	18620596	ENSG00000179119.14	-	protein_coding	KNOWN	SPTY2D1	3	6	0.462971
chr11	18665050	18665548	18665299	ENSG00000257043.1	+	processed_pseudogene	KNOWN	RP11-137N23.1	1	1	-0.002645
chr11	18693122	18704785	18698953	ENSG00000151117.8	+	protein_coding	KNOWN	TMEM86A	5	3	0.252456
chr11	18704305	18726230	18715267	ENSG00000179057.13	-	protein_coding	KNOWN	IGSF22	5	23	0.395193
chr11	18706537	18740568	18723552	ENSG00000254966.1	+	antisense	KNOWN	RP11-1081L13.4	1	3	0.409902
chr11	18727928	18792721	18760324	ENSG00000110786.17	-	protein_coding	KNOWN	PTPN5	6	15	0.287565
chr11	18836304	18837081	18836692	ENSG00000276789.1	+	processed_pseudogene	KNOWN	RP11-1081L13.5	1	1	0.082277
chr11	18863558	18864509	18864033	ENSG00000254529.1	-	unprocessed_pseudogene	KNOWN	RP11-583F24.7	1	1	-0.140893
chr11	18870989	18873462	18872225	ENSG00000255511.1	-	processed_pseudogene	KNOWN	RP11-1081L13.3	1	2	-0.644974
chr11	18886933	18887920	18887426	ENSG00000254541.1	-	unprocessed_pseudogene	KNOWN	RP11-583F24.6	1	1	-0.644974
chr11	18910436	18911396	18910916	ENSG00000255536.1	-	unprocessed_pseudogene	KNOWN	RP11-583F24.5	1	1	-0.310379
chr11	18933813	18939507	18936660	ENSG00000170255.7	-	protein_coding	KNOWN	MRGPRX1	2	2	-0.142473
chr11	18934985	18939721	18937353	ENSG00000255244.1	+	antisense	KNOWN	RP11-583F24.8	1	2	-0.142473
chr11	18956055	18957015	18956535	ENSG00000254738.1	-	unprocessed_pseudogene	KNOWN	RP11-583F24.4	1	1	-0.509924
chr11	18971746	18972703	18972224	ENSG00000254720.1	-	unprocessed_pseudogene	KNOWN	RP11-583F24.3	1	1	-0.344525
chr11	19029697	19030438	19030067	ENSG00000255424.1	-	unprocessed_pseudogene	KNOWN	RP11-589F4.2	1	1	-0.546558
chr11	19054455	19060681	19057568	ENSG00000183695.2	-	protein_coding	KNOWN	MRGPRX2	1	2	0.154276
chr11	19117099	19176422	19146760	ENSG00000177054.13	+	protein_coding	KNOWN	ZDHHC13	8	17	-0.194385
chr11	19182030	19210573	19196301	ENSG00000129170.8	-	protein_coding	KNOWN	CSRP3	2	7	-0.018943
chr11	19196775	19281426	19239100	ENSG00000255308.1	+	antisense	KNOWN	RP11-428C19.4	1	4	-0.152711
chr11	19224063	19241620	19232841	ENSG00000129173.12	-	protein_coding	KNOWN	E2F8	5	13	-0.254789
chr11	19274540	19275269	19274904	ENSG00000254544.1	-	processed_pseudogene	KNOWN	PCNAP4	1	1	-0.128057
chr11	19299883	19308358	19304120	ENSG00000255160.5	+	lincRNA	KNOWN	RP11-428C19.5	2	4	-0.038207
chr11	19350724	20121598	19736161	ENSG00000166833.19	+	protein_coding	KNOWN	NAV2	16	41	0.255540
chr11	19380484	19385014	19382749	ENSG00000255270.1	+	sense_intronic	KNOWN	NAV2-IT1	1	2	0.167043
chr11	19401872	19401981	19401926	ENSG00000200687.1	-	rRNA	KNOWN	RNA5SP335	1	1	0.011821
chr11	19502672	19507229	19504950	ENSG00000255043.1	-	antisense	KNOWN	NAV2-AS5	2	3	-0.041275
chr11	19510890	19519896	19515393	ENSG00000254622.1	-	antisense	KNOWN	NAV2-AS4	1	3	-0.166742
chr11	19575310	19575372	19575341	ENSG00000265210.1	+	miRNA	KNOWN	MIR4486	1	1	0.380180
chr11	19591156	19591291	19591223	ENSG00000207407.1	-	snoRNA	NOVEL	SNORA1	1	1	0.440478
chr11	19710934	19712619	19711776	ENSG00000270607.1	-	lincRNA	KNOWN	RP11-359E10.1	1	1	0.434880
chr11	19760004	19760083	19760043	ENSG00000264309.1	-	miRNA	KNOWN	MIR4694	1	1	0.339919
chr11	19978699	19981337	19980018	ENSG00000254542.1	-	antisense	KNOWN	NAV2-AS3	1	2	0.193022
chr11	20043846	20049303	20046574	ENSG00000254453.1	-	antisense	KNOWN	NAV2-AS2	1	2	0.333000
chr11	20119684	20120632	20120158	ENSG00000254894.1	-	antisense	KNOWN	NAV2-AS1	1	2	0.657133
chr11	20131730	20135465	20133597	ENSG00000279266.1	+	TEC	KNOWN	RP11-371I20.2	1	1	0.347721
chr11	20156155	20160613	20158384	ENSG00000109851.6	-	protein_coding	KNOWN	DBX1	1	4	0.041366
chr11	20363685	20383783	20373734	ENSG00000109854.13	+	protein_coding	KNOWN	HTATIP2	9	6	0.039425
chr11	20387530	20509294	20448412	ENSG00000185238.12	+	protein_coding	KNOWN	PRMT3	6	16	-0.185141
chr11	20568317	20568384	20568350	ENSG00000276401.1	-	miRNA	NOVEL	AC090707.1	1	1	-0.184422
chr11	20574186	20575042	20574614	ENSG00000255291.2	+	processed_pseudogene	KNOWN	RP11-701I24.1	1	2	-0.479360
chr11	20599400	20659285	20629342	ENSG00000165970.11	+	protein_coding	KNOWN	SLC6A5	3	16	-0.109672
chr11	20669551	21575681	21122616	ENSG00000165973.17	+	protein_coding	KNOWN	NELL1	13	21	-0.351775
chr11	20670425	20671297	20670861	ENSG00000254906.1	-	antisense	KNOWN	RP11-701I24.3	1	2	-0.034272
chr11	21000881	21000997	21000939	ENSG00000201059.1	-	rRNA	KNOWN	RNA5SP336	1	1	-0.208182
chr11	21169748	21170137	21169942	ENSG00000254816.1	+	processed_pseudogene	KNOWN	RP11-670N15.2	1	1	-0.206253
chr11	21260061	21262570	21261315	ENSG00000255167.1	-	antisense	KNOWN	RP11-670N15.1	1	2	-0.323046
chr11	21283779	21284955	21284367	ENSG00000225477.3	+	processed_pseudogene	KNOWN	CTD-2302A16.2	1	1	-0.501688
chr11	21383801	21383909	21383855	ENSG00000252816.1	-	rRNA	KNOWN	RNA5SP337	1	1	-0.538485
chr11	22113448	22117001	22115224	ENSG00000254820.1	+	lincRNA	KNOWN	CTD-2019O4.1	1	2	-0.786702
chr11	22193176	22283357	22238266	ENSG00000171714.10	+	protein_coding	KNOWN	ANO5	2	22	-0.400173
chr11	22261209	22262256	22261732	ENSG00000255372.1	-	antisense	KNOWN	CTD-3064C13.1	1	2	-0.537825
chr11	22283730	22338245	22310987	ENSG00000254768.5	-	antisense	KNOWN	CTD-2140G10.2	3	4	-0.490790
chr11	22338097	22379503	22358800	ENSG00000091664.7	+	protein_coding	KNOWN	SLC17A6	2	12	-0.576830
chr11	22361213	22362294	22361753	ENSG00000254540.1	-	antisense	KNOWN	CTD-2140G10.4	1	2	-0.524165
chr11	22445688	22492019	22468853	ENSG00000255323.5	-	lincRNA	KNOWN	LINC01495	2	4	-0.313190
chr11	22492112	22502846	22497479	ENSG00000255357.1	+	lincRNA	KNOWN	RP11-34N19.1	1	2	-0.692280
chr11	22622519	22626787	22624653	ENSG00000183161.4	-	protein_coding	KNOWN	FANCF	1	1	-0.409757
chr11	22625642	22813055	22719348	ENSG00000148935.10	+	protein_coding	KNOWN	GAS2	10	9	-0.574062
chr11	22688351	22688435	22688393	ENSG00000222427.1	+	rRNA	KNOWN	RNA5SP338	1	1	-0.519443
chr11	22813799	22830299	22822049	ENSG00000198168.8	-	protein_coding	KNOWN	SVIP	5	4	-0.191274
chr11	22829380	22945393	22887386	ENSG00000246225.6	+	antisense	KNOWN	RP11-17A1.3	3	5	-0.378474
chr11	22846931	22860426	22853678	ENSG00000255359.2	-	protein_coding	KNOWN	CCDC179	2	4	-0.641483
chr11	23164900	23203161	23184030	ENSG00000255418.5	+	lincRNA	KNOWN	RP11-266A24.1	2	7	-0.240260
chr11	23370116	23377644	23373880	ENSG00000271491.1	-	processed_pseudogene	KNOWN	RP11-787P24.4	1	2	-0.218709
chr11	23403805	23406103	23404954	ENSG00000255293.1	+	processed_pseudogene	KNOWN	WIZP1	1	1	-0.293662
chr11	23419105	23419190	23419147	ENSG00000275868.1	-	miRNA	KNOWN	MIR8054	1	1	-0.064127
chr11	23431677	23431799	23431738	ENSG00000254564.1	+	processed_pseudogene	KNOWN	RP11-787P24.2	1	1	-0.215676
chr11	23471644	23471713	23471678	ENSG00000264478.1	-	miRNA	NOVEL	AC100767.1	1	1	-0.290952
chr11	23478068	23480430	23479249	ENSG00000254465.1	+	processed_pseudogene	KNOWN	PRKRIRP4	1	2	-0.290952
chr11	23520322	23521202	23520762	ENSG00000240881.1	+	processed_pseudogene	KNOWN	RP11-713P14.1	1	1	-0.582913
chr11	23730588	23796970	23763779	ENSG00000255193.1	+	lincRNA	KNOWN	RP11-945A11.1	1	4	-0.153306
chr11	23761330	23804598	23782964	ENSG00000254861.1	-	lincRNA	KNOWN	RP11-945A11.2	1	3	-0.146770
chr11	23849778	23849882	23849830	ENSG00000252519.1	+	snRNA	KNOWN	RNU6-783P	1	1	-0.166926
chr11	23886135	23893557	23889846	ENSG00000277803.1	+	processed_pseudogene	KNOWN	RP11-747E23.1	1	2	-0.211860
chr11	24235477	24262218	24248847	ENSG00000254594.5	-	lincRNA	KNOWN	RP11-2F20.1	2	6	-0.183287
chr11	24455911	24456010	24455960	ENSG00000207252.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.518966
chr11	24496970	25082631	24789800	ENSG00000187398.11	+	protein_coding	KNOWN	LUZP2	8	12	-0.541330
chr11	24701275	24701575	24701425	ENSG00000255489.1	+	processed_pseudogene	KNOWN	CTC-830E23.1	1	1	-0.397212
chr11	25140533	25141023	25140778	ENSG00000255368.1	-	processed_pseudogene	KNOWN	RP11-54J7.2	1	1	-0.535096
chr11	25537278	25537371	25537324	ENSG00000265837.1	+	miRNA	NOVEL	AC015820.1	1	1	-0.808473
chr11	25588475	25588795	25588635	ENSG00000240298.3	-	processed_pseudogene	KNOWN	RPL36AP40	1	1	-0.270578
chr11	25630720	25631041	25630880	ENSG00000255454.1	+	processed_pseudogene	KNOWN	RP11-46P12.1	1	1	-0.097979
chr11	25734770	25781758	25758264	ENSG00000254456.5	+	lincRNA	KNOWN	RP11-405K6.1	3	5	-0.499039
chr11	25924188	25926808	25925498	ENSG00000254754.1	+	lincRNA	KNOWN	RP11-20J1.1	1	2	-0.391217
chr11	26045987	26047598	26046792	ENSG00000255086.1	+	processed_pseudogene	KNOWN	RP11-336F14.1	1	2	-0.232443
chr11	26189123	26208347	26198735	ENSG00000255243.1	+	lincRNA	KNOWN	CTD-2507G9.1	1	2	-0.207515
chr11	26285711	26288007	26286859	ENSG00000254819.1	-	lincRNA	KNOWN	RP11-430L3.1	1	3	-0.369456
chr11	26309599	26663288	26486443	ENSG00000134343.12	+	protein_coding	KNOWN	ANO3	5	27	-0.474467
chr11	26427051	26427412	26427231	ENSG00000255505.1	+	processed_pseudogene	KNOWN	RP11-485O14.1	1	1	-0.653194
chr11	26559033	26572233	26565633	ENSG00000169550.12	-	protein_coding	KNOWN	MUC15	5	5	-0.554920
chr11	26667019	26723427	26695223	ENSG00000148942.14	-	protein_coding	KNOWN	SLC5A12	5	15	-0.348388
chr11	26994184	26996121	26995152	ENSG00000176971.3	+	protein_coding	KNOWN	FIBIN	1	1	0.019641
chr11	27040725	27127809	27084267	ENSG00000129151.8	+	protein_coding	KNOWN	BBOX1	8	9	-0.205938
chr11	27047186	27220113	27133649	ENSG00000254560.5	-	antisense	KNOWN	BBOX1-AS1	4	5	-0.133134
chr11	27330827	27363868	27347347	ENSG00000109881.16	-	protein_coding	KNOWN	CCDC34	3	6	-0.087326
chr11	27365961	27472775	27419368	ENSG00000205213.13	-	protein_coding	KNOWN	LGR4	6	18	0.121724
chr11	27471729	27482433	27477081	ENSG00000254862.5	+	antisense	KNOWN	RP11-159H22.2	2	5	0.211573
chr11	27483850	27484128	27483989	ENSG00000242527.1	+	processed_pseudogene	KNOWN	RP11-159H22.1	1	1	0.211573
chr11	27494576	27506773	27500674	ENSG00000148943.11	-	protein_coding	KNOWN	LIN7C	2	5	-0.252273
chr11	27506838	27698174	27602506	ENSG00000245573.7	+	antisense	KNOWN	BDNF-AS	9	9	-0.065118
chr11	27514970	27515047	27515008	ENSG00000278483.1	-	miRNA	KNOWN	MIR8087	1	1	-0.243077
chr11	27521605	27521726	27521665	ENSG00000212289.1	-	rRNA	KNOWN	RNA5SP339	1	1	-0.243077
chr11	27581680	27582055	27581867	ENSG00000240036.4	+	processed_pseudogene	KNOWN	RP11-587D21.1	1	1	-0.209664
chr11	27617626	27634627	27626126	ENSG00000254934.5	-	lincRNA	KNOWN	LINC00678	2	4	-0.133636
chr11	27654893	27722058	27688475	ENSG00000176697.18	-	protein_coding	KNOWN	BDNF	19	4	0.270545
chr11	27696312	27877648	27786980	ENSG00000255496.1	-	sense_overlapping	KNOWN	RP11-587D21.4	1	2	0.184265
chr11	27806443	27806996	27806719	ENSG00000177447.6	+	processed_pseudogene	KNOWN	CBX3P1	1	1	0.134056
chr11	27888838	27891033	27889935	ENSG00000224411.3	-	processed_pseudogene	KNOWN	HSP90AA2P	1	1	0.280183
chr11	27978669	28019575	27999122	ENSG00000255094.1	-	lincRNA	KNOWN	RP11-406D1.2	1	4	-0.017872
chr11	28020620	28108308	28064464	ENSG00000121621.6	-	protein_coding	KNOWN	KIF18A	4	17	-0.348749
chr11	28056815	28056910	28056862	ENSG00000207874.1	+	miRNA	KNOWN	MIR610	1	1	-0.082783
chr11	28108248	28527041	28317644	ENSG00000169519.20	+	protein_coding	KNOWN	METTL15	12	9	-0.103566
chr11	28144907	28145204	28145055	ENSG00000271332.1	-	processed_pseudogene	KNOWN	RP11-797J4.1	1	1	0.149707
chr11	28261194	28261519	28261356	ENSG00000222385.1	-	misc_RNA	KNOWN	RN7SKP158	1	1	-0.127018
chr11	28287235	28287625	28287430	ENSG00000238149.1	-	processed_pseudogene	KNOWN	AC104978.1	1	1	-0.351243
chr11	28477481	28477548	28477514	ENSG00000273912.1	-	miRNA	KNOWN	MIR8068	1	1	0.012068
chr11	28516832	28519341	28518086	ENSG00000254606.1	+	lincRNA	KNOWN	RP11-22P4.2	1	2	0.155070
chr11	28679183	28683469	28681326	ENSG00000248990.1	+	lincRNA	KNOWN	RP11-960D24.1	1	3	-0.260797
chr11	28702615	29063821	28883218	ENSG00000249867.5	+	lincRNA	KNOWN	RP11-115J23.1	2	4	-0.159275
chr11	28986635	28987498	28987066	ENSG00000272882.1	+	unprocessed_pseudogene	KNOWN	OR2BH1P	1	1	-0.152161
chr11	29159956	29266734	29213345	ENSG00000254526.1	+	lincRNA	KNOWN	RP11-466I1.1	1	5	-0.172825
chr11	29275655	29276565	29276110	ENSG00000255450.1	+	processed_pseudogene	KNOWN	CTD-2063L20.1	1	1	-0.047411
chr11	29276689	29276805	29276747	ENSG00000211499.1	+	miRNA	NOVEL	AC110056.1	1	1	-0.047411
chr11	29335878	29594295	29465086	ENSG00000254530.1	-	lincRNA	KNOWN	RP11-460B17.3	2	4	-0.457403
chr11	29391525	29393844	29392684	ENSG00000255281.1	+	processed_pseudogene	KNOWN	RP11-460B17.1	1	3	-0.406035
chr11	29445487	29457393	29451440	ENSG00000255227.1	+	lincRNA	KNOWN	RP11-460B17.2	1	6	-0.253256
chr11	29519076	29552639	29535857	ENSG00000255029.1	+	lincRNA	KNOWN	CTD-3012A18.1	1	2	-0.474629
chr11	29594918	29630664	29612791	ENSG00000255117.5	+	lincRNA	KNOWN	RP5-1027O15.1	2	3	-0.656895
chr11	29668886	29669628	29669257	ENSG00000255047.1	-	processed_pseudogene	KNOWN	HNRNPRP2	1	1	-0.186724
chr11	29713909	29881714	29797811	ENSG00000254734.1	+	lincRNA	KNOWN	CTD-3138F19.1	1	3	-0.359419
chr11	29721399	29721684	29721541	ENSG00000243505.3	-	misc_RNA	KNOWN	RN7SL240P	1	1	-0.427118
chr11	29725764	29726565	29726164	ENSG00000240554.1	+	processed_pseudogene	KNOWN	RPL7AP58	1	1	-0.427118
chr11	29980113	29982392	29981252	ENSG00000261340.1	-	lincRNA	KNOWN	LINC01616	1	1	-0.381462
chr11	30009741	30017023	30013382	ENSG00000182255.6	-	protein_coding	KNOWN	KCNA4	2	2	-0.277183
chr11	30044058	30084343	30064200	ENSG00000254532.1	-	lincRNA	KNOWN	RP11-624D11.2	1	2	-0.373343
chr11	30167163	30167306	30167234	ENSG00000255288.1	+	processed_pseudogene	KNOWN	RP4-562D20.2	1	1	-0.751889
chr11	30231016	30235261	30233138	ENSG00000131808.10	+	protein_coding	KNOWN	FSHB	3	3	-0.387176
chr11	30323051	30338227	30330639	ENSG00000152219.4	+	protein_coding	KNOWN	ARL14EP	4	4	-0.215627
chr11	30368148	30368646	30368397	ENSG00000242353.1	+	processed_pseudogene	KNOWN	RPL12P30	1	1	-0.363460
chr11	30384493	30586872	30485682	ENSG00000066382.16	-	protein_coding	KNOWN	MPPED2	8	8	-0.337492
chr11	30425552	30429268	30427410	ENSG00000255480.1	+	antisense	KNOWN	RP4-710M3.2	1	2	-0.266462
chr11	30584130	30630508	30607319	ENSG00000254489.1	+	antisense	KNOWN	RP5-1024C24.1	2	5	-0.396210
chr11	30830369	31369810	31100089	ENSG00000170959.14	-	protein_coding	KNOWN	DCDC1	11	36	-0.446242
chr11	31205759	31205894	31205826	ENSG00000221629.1	+	miRNA	NOVEL	AL162614.1	1	1	-0.639191
chr11	31280672	31280987	31280829	ENSG00000255370.1	-	processed_pseudogene	KNOWN	CYCSP25	1	1	-0.849710
chr11	31305685	31314548	31310116	ENSG00000255525.1	+	antisense	KNOWN	RP1-296L11.1	1	4	-0.509764
chr11	31369840	31431849	31400844	ENSG00000170946.14	+	protein_coding	KNOWN	DNAJC24	11	5	-0.423636
chr11	31432401	31509645	31471023	ENSG00000148950.9	-	protein_coding	KNOWN	IMMP1L	15	7	-0.225208
chr11	31435470	31435562	31435516	ENSG00000221338.2	-	miRNA	NOVEL	AC108456.1	1	1	-0.227829
chr11	31509750	31783998	31646874	ENSG00000109911.17	+	protein_coding	KNOWN	ELP4	4	12	-0.296326
chr11	31571991	31572124	31572057	ENSG00000281686.1	-	miRNA	NOVEL	AC108456.2	1	1	-0.267089
chr11	31637328	31767953	31702640	ENSG00000228061.5	-	antisense	KNOWN	Z83001.1	3	4	-0.326624
chr11	31784792	31817961	31801376	ENSG00000007372.20	-	protein_coding	KNOWN	PAX6	31	14	-0.047488
chr11	31812391	32105755	31959073	ENSG00000049449.8	+	protein_coding	KNOWN	RCN1	11	6	-0.043278
chr11	31826347	31829311	31827829	ENSG00000281880.1	+	lincRNA	KNOWN	PAUPAR	1	1	0.511448
chr11	32035981	32041318	32038649	ENSG00000254584.1	-	antisense	KNOWN	RP1-17K7.2	2	3	-0.302086
chr11	32052843	32053260	32053051	ENSG00000254836.1	-	antisense	KNOWN	RP1-17K7.3	1	2	-0.053549
chr11	32064912	32072173	32068542	ENSG00000254627.1	+	sense_intronic	KNOWN	RP1-17K7.1	1	3	0.088517
chr11	32081764	32081973	32081868	ENSG00000212551.2	+	snoRNA	NOVEL	U3	1	1	0.420940
chr11	32085111	32085712	32085411	ENSG00000255490.1	+	processed_pseudogene	KNOWN	EIF4A2P5	1	2	0.420940
chr11	32097143	32105091	32101117	ENSG00000255252.3	-	antisense	KNOWN	RP1-65P5.3	1	2	0.209229
chr11	32112049	32343409	32227729	ENSG00000227160.2	-	unitary_pseudogene	KNOWN	THEM7P	2	3	-0.054799
chr11	32132699	32143579	32138139	ENSG00000255375.1	+	lincRNA	KNOWN	RP1-65P5.5	1	3	0.032049
chr11	32387775	32435630	32411702	ENSG00000184937.12	-	protein_coding	KNOWN	WT1	9	10	0.035756
chr11	32435518	32458769	32447143	ENSG00000183242.11	+	antisense	KNOWN	WT1-AS	8	5	-0.140105
chr11	32435738	32435846	32435792	ENSG00000278822.1	+	misc_RNA	NOVEL	WT1-AS_1	1	1	0.017610
chr11	32436311	32436447	32436379	ENSG00000273677.1	+	misc_RNA	NOVEL	WT1-AS_2	1	1	0.017610
chr11	32436797	32437030	32436913	ENSG00000278045.1	+	misc_RNA	NOVEL	WT1-AS_3	1	1	0.017610
chr11	32439086	32439206	32439146	ENSG00000276530.1	+	misc_RNA	NOVEL	WT1-AS_6	1	1	0.017610
chr11	32439716	32440009	32439862	ENSG00000273908.1	+	misc_RNA	NOVEL	WT1-AS_7	1	1	0.017610
chr11	32440109	32440383	32440246	ENSG00000277119.1	+	misc_RNA	NOVEL	WT1-AS_8	1	1	0.017610
chr11	32497587	32497666	32497626	ENSG00000274141.1	-	miRNA	NOVEL	AC087653.1	1	1	-0.363891
chr11	32583798	32606262	32595030	ENSG00000149100.12	+	protein_coding	KNOWN	EIF3M	13	11	-0.027741
chr11	32591793	32592771	32592282	ENSG00000270903.1	-	processed_pseudogene	KNOWN	HNRNPA3P9	1	1	0.010920
chr11	32602246	32794658	32698452	ENSG00000186714.12	-	protein_coding	KNOWN	CCDC73	4	18	-0.368783
chr11	32758268	32758614	32758441	ENSG00000244535.1	+	processed_pseudogene	KNOWN	RP1-181J22.1	1	1	-0.416705
chr11	32829943	32858123	32844033	ENSG00000135378.3	+	protein_coding	KNOWN	PRRG4	1	6	-0.229755
chr11	32893178	32993316	32943247	ENSG00000060749.14	+	protein_coding	KNOWN	QSER1	6	16	-0.120716
chr11	33004250	33004345	33004297	ENSG00000200615.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.069152
chr11	33015864	33033582	33024723	ENSG00000121690.9	+	protein_coding	KNOWN	DEPDC7	5	10	0.328312
chr11	33039417	33105943	33072680	ENSG00000176148.15	+	protein_coding	KNOWN	TCP11L1	11	13	0.254278
chr11	33073925	33074214	33074069	ENSG00000280550.1	-	protein_coding	KNOWN	AC131263.1	1	2	0.560545
chr11	33075566	33076460	33076013	ENSG00000213713.3	-	processed_pseudogene	KNOWN	PIGCP1	1	1	0.560545
chr11	33076149	33079454	33077801	ENSG00000280798.1	+	lincRNA	KNOWN	LINC00294	1	1	0.560545
chr11	33077188	33162371	33119779	ENSG00000176102.11	-	protein_coding	KNOWN	CSTF3	8	21	0.033616
chr11	33161657	33191598	33176627	ENSG00000247151.6	+	antisense	KNOWN	CSTF3-AS1	2	4	0.230472
chr11	33171381	33171490	33171435	ENSG00000206808.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.351184
chr11	33190062	33190503	33190282	ENSG00000241950.1	-	processed_pseudogene	KNOWN	RPL29P23	1	1	0.509227
chr11	33196547	33196637	33196592	ENSG00000200485.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.509227
chr11	33237008	33237409	33237208	ENSG00000241255.1	+	processed_pseudogene	KNOWN	RP1-89D4.1	1	1	0.294036
chr11	33256672	33357023	33306847	ENSG00000110422.11	+	protein_coding	KNOWN	HIPK3	6	17	0.305146
chr11	33354465	33354545	33354505	ENSG00000223134.1	+	miRNA	NOVEL	AL122015.1	1	1	-0.160774
chr11	33403216	33403605	33403410	ENSG00000254537.1	+	processed_pseudogene	KNOWN	RP1-130L23.1	1	1	0.029407
chr11	33450646	33450943	33450794	ENSG00000255207.1	+	processed_pseudogene	KNOWN	RP1-305G21.1	1	1	0.054902
chr11	33542072	33674102	33608087	ENSG00000110427.14	+	protein_coding	KNOWN	KIAA1549L	3	20	0.433301
chr11	33665220	33696701	33680960	ENSG00000255202.1	-	antisense	KNOWN	RP4-541C22.5	1	4	0.318438
chr11	33698261	33736445	33717353	ENSG00000085063.14	-	protein_coding	KNOWN	CD59	14	6	0.335238
chr11	33698261	33700801	33699531	ENSG00000205177.6	-	protein_coding	KNOWN	C11orf91	2	3	0.451988
chr11	33740939	33774543	33757741	ENSG00000110429.13	-	protein_coding	KNOWN	FBXO3	13	11	0.073016
chr11	33774699	33775670	33775184	ENSG00000254508.5	+	antisense	KNOWN	FBXO3-AS1	2	3	0.172610
chr11	33776188	33779495	33777841	ENSG00000255272.1	+	antisense	KNOWN	RP11-646J21.6	1	2	0.172610
chr11	33787054	33787795	33787424	ENSG00000255161.1	-	processed_pseudogene	KNOWN	RP11-646J21.7	1	1	0.172610
chr11	33804768	33805641	33805204	ENSG00000255169.1	+	lincRNA	KNOWN	RP11-646J21.3	1	3	0.261917
chr11	33810145	33811178	33810661	ENSG00000254619.1	+	lincRNA	KNOWN	RP11-646J21.4	1	2	0.303139
chr11	33814877	33822095	33818486	ENSG00000255133.1	-	lincRNA	KNOWN	RP11-646J21.2	1	3	0.303139
chr11	33858576	33892289	33875432	ENSG00000135363.11	-	protein_coding	KNOWN	LMO2	6	6	0.081063
chr11	33860672	33860769	33860720	ENSG00000281628.1	+	miRNA	NOVEL	AC113192.1	1	1	0.091992
chr11	33880643	33881800	33881221	ENSG00000184566.3	+	antisense	KNOWN	RP13-786C16.1	2	1	0.029256
chr11	34051683	34101156	34076419	ENSG00000135387.19	+	protein_coding	KNOWN	CAPRIN1	18	19	0.305155
chr11	34105602	34147670	34126636	ENSG00000135372.8	+	protein_coding	KNOWN	NAT10	10	29	0.360932
chr11	34150988	34358008	34254498	ENSG00000166016.5	-	protein_coding	KNOWN	ABTB2	2	17	0.535808
chr11	34189174	34189275	34189224	ENSG00000201867.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.723347
chr11	34335118	34336003	34335560	ENSG00000254708.1	-	processed_pseudogene	KNOWN	RP1-145M24.1	1	1	0.432616
chr11	34404663	34404949	34404806	ENSG00000220204.1	-	processed_pseudogene	KNOWN	RP1-53C18.3	1	1	-0.136036
chr11	34430880	34431649	34431264	ENSG00000216708.1	+	processed_pseudogene	KNOWN	CIR1P3	1	2	0.502624
chr11	34438925	34472062	34455493	ENSG00000121691.4	+	protein_coding	KNOWN	CAT	5	13	0.287504
chr11	34478793	34513805	34496299	ENSG00000135374.9	-	protein_coding	KNOWN	ELF5	6	7	0.272313
chr11	34484436	34484538	34484487	ENSG00000264667.1	-	miRNA	NOVEL	AL137224.1	1	1	0.228728
chr11	34533014	34557924	34545469	ENSG00000255271.1	-	lincRNA	KNOWN	RP4-594L9.2	1	3	0.001296
chr11	34570876	34573982	34572429	ENSG00000255427.1	+	lincRNA	KNOWN	RP11-350D17.2	1	2	-0.077933
chr11	34621093	34661057	34641075	ENSG00000135373.12	+	protein_coding	KNOWN	EHF	12	9	0.164087
chr11	34709600	34710161	34709880	ENSG00000271369.1	+	processed_pseudogene	KNOWN	RP11-350D17.3	1	1	-0.174140
chr11	34742906	34743199	34743052	ENSG00000270491.1	+	processed_pseudogene	KNOWN	RP4-743O11.1	1	1	-0.155446
chr11	34853094	34916499	34884796	ENSG00000149089.12	-	protein_coding	KNOWN	APIP	3	8	-0.132065
chr11	34915829	35020591	34968210	ENSG00000110435.11	+	protein_coding	KNOWN	PDHX	8	11	-0.065753
chr11	34941837	34941920	34941878	ENSG00000251862.2	+	miRNA	KNOWN	MIR1343	1	1	-0.225349
chr11	34945112	34945187	34945149	ENSG00000280915.1	+	miRNA	NOVEL	AL138810.1	1	1	-0.225349
chr11	35132655	35138032	35135343	ENSG00000255521.1	-	antisense	KNOWN	RP4-607I7.1	2	3	0.084687
chr11	35138870	35232402	35185636	ENSG00000026508.16	+	protein_coding	KNOWN	CD44	38	18	0.273054
chr11	35210343	35214985	35212664	ENSG00000255443.1	-	antisense	KNOWN	RP1-68D18.4	1	2	0.313164
chr11	35212550	35214007	35213278	ENSG00000251194.2	+	sense_intronic	KNOWN	RP1-68D18.2	1	2	0.313164
chr11	35251206	35420063	35335634	ENSG00000110436.11	-	protein_coding	KNOWN	SLC1A2	8	12	0.237183
chr11	35281813	35286009	35283911	ENSG00000255004.1	+	antisense	KNOWN	RP1-68D18.3	1	2	0.168749
chr11	35374265	35374474	35374369	ENSG00000215380.2	+	processed_pseudogene	KNOWN	AC090625.1	1	1	0.070512
chr11	35419057	35421002	35420029	ENSG00000255542.1	+	antisense	KNOWN	RP4-683L5.1	1	2	0.243995
chr11	35431823	35530300	35481061	ENSG00000149090.11	-	protein_coding	KNOWN	PAMR1	9	13	0.252380
chr11	35579430	35585310	35582370	ENSG00000254669.1	-	lincRNA	KNOWN	RP5-945I17.2	1	4	0.327737
chr11	35618419	35620868	35619643	ENSG00000179431.6	+	protein_coding	KNOWN	FJX1	2	2	0.257276
chr11	35656694	35661339	35659016	ENSG00000254686.2	+	lincRNA	KNOWN	RP1-276E15.1	1	3	0.220148
chr11	35662805	35818007	35740406	ENSG00000166326.6	+	protein_coding	KNOWN	TRIM44	2	5	0.018122
chr11	35860249	35861498	35860873	ENSG00000186082.9	-	processed_pseudogene	KNOWN	KRT18P14	1	1	-0.008702
chr11	35860654	35860744	35860699	ENSG00000266590.1	-	miRNA	NOVEL	AC090692.1	1	1	-0.008702
chr11	35915051	35918739	35916895	ENSG00000254919.1	-	antisense	KNOWN	RP11-698N11.2	2	3	-0.299517
chr11	35943981	36232136	36088058	ENSG00000179241.12	+	protein_coding	KNOWN	LDLRAD3	6	6	0.167617
chr11	35967010	35968676	35967843	ENSG00000254672.1	-	processed_pseudogene	KNOWN	RP5-916O11.3	1	1	0.294381
chr11	35972428	35989007	35980717	ENSG00000255256.1	+	sense_intronic	KNOWN	RP5-916O11.2	1	2	-0.099628
chr11	35997226	35997675	35997450	ENSG00000241228.1	-	processed_pseudogene	KNOWN	RPL12P31	1	1	0.235117
chr11	36010098	36010204	36010151	ENSG00000263389.1	+	miRNA	KNOWN	MIR3973	1	1	-0.060011
chr11	36196248	36197901	36197074	ENSG00000280321.1	+	TEC	KNOWN	RP11-1110F20.1	1	1	0.115839
chr11	36269284	36289449	36279366	ENSG00000110442.11	-	protein_coding	KNOWN	COMMD9	8	6	0.355380
chr11	36296288	36465204	36380746	ENSG00000135362.13	+	protein_coding	KNOWN	PRR5L	20	10	0.290764
chr11	36321158	36323440	36322299	ENSG00000254566.1	-	lincRNA	KNOWN	RP11-514F3.4	1	2	0.329571
chr11	36386521	36388250	36387385	ENSG00000255186.1	+	sense_intronic	KNOWN	RP11-514F3.5	1	2	0.546304
chr11	36425447	36426122	36425784	ENSG00000255060.1	-	antisense	KNOWN	RP11-219O3.2	1	2	0.435724
chr11	36487027	36510272	36498649	ENSG00000175104.14	-	protein_coding	KNOWN	TRAF6	3	8	0.015324
chr11	36510361	36510537	36510449	ENSG00000280331.1	+	TEC	KNOWN	RP11-545D22.1	1	1	-0.038856
chr11	36510709	36593156	36551932	ENSG00000166349.9	+	protein_coding	KNOWN	RAG1	3	10	-0.210683
chr11	36575574	36598279	36586926	ENSG00000175097.7	-	protein_coding	KNOWN	RAG2	9	3	-0.184627
chr11	36594493	36659290	36626891	ENSG00000166352.15	+	protein_coding	KNOWN	C11orf74	11	7	-0.188890
chr11	36696317	36697867	36697092	ENSG00000254498.1	+	processed_pseudogene	KNOWN	CTD-2119L1.1	1	2	-0.086345
chr11	37278322	37278417	37278369	ENSG00000275364.1	+	miRNA	NOVEL	AC087174.1	1	1	-0.757766
chr11	37702125	37702220	37702172	ENSG00000251838.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.236062
chr11	37725666	37726456	37726061	ENSG00000242834.1	+	processed_pseudogene	KNOWN	RPL7AP56	1	1	-0.706750
chr11	37938601	37954663	37946632	ENSG00000254516.1	+	lincRNA	KNOWN	RP11-159D8.1	1	3	-0.511946
chr11	38013510	38014141	38013825	ENSG00000279004.1	-	TEC	KNOWN	RP11-159D8.2	1	1	-0.399544
chr11	38211389	38212799	38212094	ENSG00000254784.1	+	processed_pseudogene	KNOWN	LRRC6P1	1	2	-0.854897
chr11	38498995	38500186	38499590	ENSG00000255477.1	+	lincRNA	KNOWN	RP11-63D14.1	1	2	-0.429245
chr11	38618264	38646356	38632310	ENSG00000255175.5	-	lincRNA	KNOWN	RP11-277K23.1	2	5	-0.244688
chr11	38646476	38674241	38660358	ENSG00000254562.5	+	lincRNA	KNOWN	LINC01493	3	4	-0.625326
chr11	39161453	39161967	39161710	ENSG00000240975.1	+	processed_pseudogene	KNOWN	RP11-313M3.1	1	1	-0.469124
chr11	39261107	39261213	39261160	ENSG00000201591.1	+	snRNA	KNOWN	RNU6-99P	1	1	-0.700912
chr11	39730812	39730908	39730860	ENSG00000281643.1	-	miRNA	NOVEL	AC027806.1	1	1	-0.247495
chr11	39861506	39861594	39861550	ENSG00000221804.1	-	miRNA	NOVEL	AC021749.1	1	1	-0.555127
chr11	39873782	39874388	39874085	ENSG00000270588.1	+	processed_pseudogene	KNOWN	RP11-810F22.1	1	1	-0.625421
chr11	40083710	40084517	40084113	ENSG00000255347.1	-	processed_pseudogene	KNOWN	RP11-40H19.1	1	1	-0.642114
chr11	40107244	40112599	40109921	ENSG00000279675.1	-	TEC	KNOWN	RP11-454H19.2	1	1	-0.401998
chr11	40114203	41459773	40786988	ENSG00000148948.7	-	protein_coding	KNOWN	LRRC4C	7	7	-0.441137
chr11	40351564	40351672	40351618	ENSG00000206806.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.501688
chr11	40445304	40447141	40446222	ENSG00000254579.1	-	processed_pseudogene	KNOWN	RP11-407P18.1	1	1	-0.073346
chr11	40759522	40759605	40759563	ENSG00000221357.1	+	miRNA	NOVEL	AC104387.1	1	1	-0.531703
chr11	41122907	41123012	41122959	ENSG00000252922.1	-	snRNA	KNOWN	RNU6-365P	1	1	-0.890306
chr11	41394595	41426504	41410549	ENSG00000255132.1	+	lincRNA	KNOWN	RP11-63C8.1	1	3	-0.443751
chr11	41518895	41714448	41616671	ENSG00000255388.5	-	lincRNA	KNOWN	RP11-124G5.3	2	7	-0.332446
chr11	41538434	41538986	41538710	ENSG00000242729.1	+	processed_pseudogene	KNOWN	RP11-124G5.1	1	1	-0.299199
chr11	41660030	41660221	41660125	ENSG00000255563.1	+	processed_pseudogene	KNOWN	RP11-124G5.2	1	1	-0.421269
chr11	41714568	41836442	41775505	ENSG00000255171.5	+	lincRNA	KNOWN	LINC01499	3	6	-0.421016
chr11	41797543	41797964	41797753	ENSG00000254668.1	+	processed_pseudogene	KNOWN	RP11-375D13.1	1	1	-0.352793
chr11	41855920	41875997	41865958	ENSG00000255279.1	+	lincRNA	KNOWN	RP11-375D13.4	3	3	-0.444703
chr11	41876634	41877078	41876856	ENSG00000254822.1	+	lincRNA	KNOWN	RP11-375D13.3	1	2	-0.363203
chr11	41993385	42163851	42078618	ENSG00000255300.5	-	lincRNA	KNOWN	RP11-148I19.1	2	5	-0.441129
chr11	42121101	42121168	42121134	ENSG00000274470.1	-	miRNA	NOVEL	AC079917.1	1	1	-0.415492
chr11	42183292	42253712	42218502	ENSG00000255109.5	-	lincRNA	KNOWN	CTD-2572N17.1	3	5	-0.374621
chr11	42939775	42939998	42939886	ENSG00000254914.1	+	processed_pseudogene	KNOWN	CTD-2537L20.1	1	1	-0.021964
chr11	43063637	43065932	43064784	ENSG00000271028.1	-	processed_pseudogene	KNOWN	RP11-111A24.2	1	2	-0.456751
chr11	43065686	43066076	43065881	ENSG00000254725.1	-	processed_pseudogene	KNOWN	RP11-111A24.1	1	1	-0.456751
chr11	43120762	43269393	43195077	ENSG00000251557.2	-	transcribed_processed_pseudogene	KNOWN	HNRNPKP3	3	3	-0.092300
chr11	43311963	43344529	43328246	ENSG00000166181.12	+	protein_coding	KNOWN	API5	11	15	0.062460
chr11	43328748	43359296	43344022	ENSG00000254907.1	-	antisense	KNOWN	RP11-484D2.2	1	4	0.108103
chr11	43331261	43331356	43331308	ENSG00000252652.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.102484
chr11	43358932	43494933	43426932	ENSG00000052841.14	+	protein_coding	KNOWN	TTC17	15	24	-0.065761
chr11	43378882	43385671	43382276	ENSG00000255340.1	-	antisense	KNOWN	RP11-484D2.5	1	2	0.108671
chr11	43390283	43395495	43392889	ENSG00000254577.1	+	sense_overlapping	KNOWN	RP11-484D2.4	1	2	-0.201739
chr11	43435132	43435397	43435264	ENSG00000252355.1	-	misc_RNA	KNOWN	RN7SKP287	1	1	0.083430
chr11	43466392	43466871	43466631	ENSG00000254463.1	+	processed_pseudogene	KNOWN	RP11-484D2.3	1	1	-0.323046
chr11	43522036	43523264	43522650	ENSG00000213697.3	+	processed_pseudogene	KNOWN	CTBP2P6	1	1	0.141623
chr11	43556436	43856617	43706526	ENSG00000149084.11	+	protein_coding	KNOWN	HSD17B12	15	11	-0.034174
chr11	43556758	43570395	43563576	ENSG00000235661.2	+	unitary_pseudogene	KNOWN	MIR670HG	2	2	0.283746
chr11	43559656	43559753	43559704	ENSG00000211568.1	+	miRNA	KNOWN	MIR670	1	1	0.287912
chr11	43581380	43581487	43581433	ENSG00000199077.2	+	miRNA	KNOWN	MIR129-2	1	1	0.144459
chr11	43718676	43719146	43718911	ENSG00000243721.1	+	processed_pseudogene	KNOWN	RPL23AP63	1	1	-0.299838
chr11	43733759	43734564	43734161	ENSG00000254512.1	+	processed_pseudogene	KNOWN	PHBP2	1	1	-0.196578
chr11	43829709	43880726	43855217	ENSG00000246250.2	-	antisense	KNOWN	RP11-613D13.5	4	4	0.126311
chr11	43880811	43920266	43900538	ENSG00000166199.12	+	protein_coding	KNOWN	ALKBH3	12	10	0.088632
chr11	43897456	43899636	43898546	ENSG00000213693.4	+	processed_pseudogene	KNOWN	SEC14L1P1	1	1	0.068013
chr11	43909292	43920944	43915118	ENSG00000244926.6	-	antisense	KNOWN	ALKBH3-AS1	4	6	0.030959
chr11	43921059	44001157	43961108	ENSG00000254409.1	+	sense_overlapping	KNOWN	RP11-613D13.4	2	7	0.343506
chr11	43925342	43944338	43934840	ENSG00000187479.5	+	protein_coding	KNOWN	C11orf96	3	4	0.457143
chr11	43943787	43947206	43945496	ENSG00000244953.1	-	lincRNA	KNOWN	RP11-613D13.8	1	2	0.596336
chr11	44047981	44059977	44053979	ENSG00000205126.2	+	protein_coding	KNOWN	ACCSL	2	14	0.094381
chr11	44065925	44084222	44075073	ENSG00000110455.13	+	protein_coding	KNOWN	ACCS	13	15	0.202257
chr11	44071462	44072403	44071932	ENSG00000255165.1	+	sense_intronic	KNOWN	CTD-2609K8.3	1	2	0.243995
chr11	44095549	44245429	44170489	ENSG00000151348.13	+	protein_coding	KNOWN	EXT2	11	15	0.015335
chr11	44260444	44310166	44285305	ENSG00000052850.5	-	protein_coding	KNOWN	ALX4	1	4	0.590021
chr11	44468464	44470429	44469446	ENSG00000255451.1	+	lincRNA	KNOWN	RP11-58K22.1	1	3	0.300474
chr11	44539778	44540693	44540235	ENSG00000255106.1	-	processed_pseudogene	KNOWN	RP11-58K22.2	1	2	0.617248
chr11	44564427	44620363	44592395	ENSG00000085117.11	+	protein_coding	KNOWN	CD82	14	10	0.646483
chr11	44604508	44605337	44604922	ENSG00000254693.1	-	antisense	KNOWN	RP11-58K22.5	1	2	0.689756
chr11	44606170	44608101	44607135	ENSG00000255092.1	-	antisense	KNOWN	RP11-58K22.4	1	4	0.689756
chr11	44629357	44629674	44629515	ENSG00000244267.1	+	processed_pseudogene	KNOWN	RPL34P22	1	1	0.739690
chr11	44656771	44656920	44656845	ENSG00000275725.1	+	processed_pseudogene	KNOWN	RP11-244C20.2	1	1	0.274195
chr11	44694863	44696301	44695582	ENSG00000255079.1	-	lincRNA	KNOWN	RP11-45A12.1	1	2	0.305860
chr11	44719392	44736692	44728042	ENSG00000255032.1	-	lincRNA	KNOWN	RP11-45A12.2	1	3	0.339846
chr11	44726465	44932421	44829443	ENSG00000157570.11	+	protein_coding	KNOWN	TSPAN18	13	10	0.498816
chr11	44885903	44951306	44918604	ENSG00000175274.18	-	protein_coding	KNOWN	TP53I11	23	10	0.640224
chr11	44973902	44978028	44975965	ENSG00000254654.1	+	lincRNA	KNOWN	AC068858.1	1	4	0.185101
chr11	45095806	45235124	45165465	ENSG00000019485.12	+	protein_coding	KNOWN	PRDM11	6	8	0.337175
chr11	45215815	45235292	45225553	ENSG00000254664.1	-	antisense	KNOWN	CTD-2560E9.3	1	2	0.275949
chr11	45240301	45286319	45263310	ENSG00000019505.7	-	protein_coding	KNOWN	SYT13	3	8	0.177384
chr11	45253884	45254649	45254266	ENSG00000254497.1	+	antisense	KNOWN	CTD-2560E9.5	2	3	0.227556
chr11	45355371	45366121	45360746	ENSG00000254427.1	+	lincRNA	KNOWN	RP11-430H10.1	3	2	-0.019369
chr11	45371397	45388508	45379952	ENSG00000255267.3	+	lincRNA	KNOWN	RP11-430H10.2	1	5	0.513028
chr11	45387215	45513802	45450508	ENSG00000255041.1	-	lincRNA	KNOWN	RP11-430H10.4	1	3	0.251686
chr11	45399448	45400528	45399988	ENSG00000254651.1	+	lincRNA	KNOWN	RP11-430H10.3	1	2	0.056716
chr11	45489689	45542474	45516081	ENSG00000254746.5	-	processed_transcript	KNOWN	RP11-958J22.1	4	6	0.235012
chr11	45514187	45514451	45514319	ENSG00000255519.1	+	processed_pseudogene	KNOWN	RP11-958J22.2	1	1	0.061457
chr11	45582525	45583474	45582999	ENSG00000254514.1	+	lincRNA	KNOWN	RP11-958J22.3	1	2	0.258770
chr11	45648877	45665622	45657249	ENSG00000175264.7	-	protein_coding	KNOWN	CHST1	3	4	0.449907
chr11	45651529	45652691	45652110	ENSG00000255091.1	+	antisense	KNOWN	RP11-495O11.1	1	2	0.500797
chr11	45691704	45691776	45691740	ENSG00000276639.1	-	miRNA	KNOWN	MIR7154	1	1	0.133412
chr11	45722308	45744254	45733281	ENSG00000254519.3	+	processed_transcript	KNOWN	CTD-2210P24.1	10	7	0.169057
chr11	45733994	45735766	45734880	ENSG00000255426.1	-	lincRNA	KNOWN	CTD-2210P24.2	1	2	0.181259
chr11	45750823	45751871	45751347	ENSG00000255226.1	-	lincRNA	KNOWN	CTD-2210P24.3	2	2	0.330152
chr11	45771432	45772358	45771895	ENSG00000205106.4	+	lincRNA	KNOWN	DKFZp779M0652	1	2	0.039796
chr11	45804072	45813015	45808543	ENSG00000181830.8	+	protein_coding	KNOWN	SLC35C1	4	3	0.233559
chr11	45813219	45825258	45819238	ENSG00000255447.1	+	lincRNA	KNOWN	CTD-2210P24.6	1	3	0.450127
chr11	45847118	45883248	45865183	ENSG00000121671.11	+	protein_coding	KNOWN	CRY2	12	12	0.782155
chr11	45885651	45906465	45896058	ENSG00000121653.11	+	protein_coding	KNOWN	MAPK8IP1	3	12	0.862651
chr11	45905941	45906461	45906201	ENSG00000255498.1	-	antisense	KNOWN	RP11-618K13.2	1	2	0.883750
chr11	45906513	45907282	45906897	ENSG00000234776.4	-	protein_coding	KNOWN	C11orf94	2	3	0.883750
chr11	45909669	45918812	45914240	ENSG00000121680.15	-	protein_coding	KNOWN	PEX16	11	11	1.133852
chr11	45921621	45929096	45925358	ENSG00000165905.16	+	protein_coding	KNOWN	GYLTL1B	11	15	1.143217
chr11	45929323	46121178	46025250	ENSG00000135365.15	-	protein_coding	KNOWN	PHF21A	21	18	0.258129
chr11	46113122	46113218	46113170	ENSG00000263539.1	-	miRNA	NOVEL	AC024475.1	1	1	0.082773
chr11	46116578	46117318	46116948	ENSG00000254653.1	+	lincRNA	KNOWN	RP11-702F3.1	1	2	0.082773
chr11	46123573	46177106	46150339	ENSG00000255314.2	+	lincRNA	KNOWN	RP11-702F3.3	2	4	0.187390
chr11	46142716	46143594	46143155	ENSG00000254871.1	+	processed_pseudogene	KNOWN	RP11-702F3.2	1	1	0.201221
chr11	46213824	46220438	46217131	ENSG00000255269.2	-	lincRNA	KNOWN	RP11-702F3.4	5	4	0.407494
chr11	46238382	46239267	46238824	ENSG00000254639.1	+	lincRNA	KNOWN	CTD-2589M5.5	1	2	0.084687
chr11	46244159	46244273	46244216	ENSG00000281554.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.084687
chr11	46256355	46274547	46265451	ENSG00000255007.1	-	antisense	KNOWN	CTD-2589M5.4	1	2	0.697683
chr11	46277661	46321422	46299541	ENSG00000157613.10	+	protein_coding	KNOWN	CREB3L1	6	12	0.869856
chr11	46332905	46380554	46356729	ENSG00000149091.15	+	protein_coding	KNOWN	DGKZ	24	32	0.835928
chr11	46376402	46376484	46376443	ENSG00000264102.1	+	miRNA	KNOWN	MIR4688	1	1	1.032753
chr11	46380756	46383837	46382296	ENSG00000110492.15	+	protein_coding	KNOWN	MDK	13	5	1.032753
chr11	46385098	46386608	46385853	ENSG00000180720.7	-	protein_coding	KNOWN	CHRM4	1	1	1.032753
chr11	46396414	46594125	46495269	ENSG00000110497.14	-	protein_coding	KNOWN	AMBRA1	12	19	0.574242
chr11	46428653	46429150	46428901	ENSG00000244313.3	-	processed_pseudogene	KNOWN	RP11-425L10.1	1	1	0.742185
chr11	46451805	46451889	46451847	ENSG00000265014.1	-	miRNA	KNOWN	MIR3160-2	1	1	0.246966
chr11	46602861	46617909	46610385	ENSG00000180423.4	-	protein_coding	KNOWN	HARBI1	3	3	0.608564
chr11	46617527	46674818	46646172	ENSG00000175224.16	+	protein_coding	KNOWN	ATG13	30	18	0.677151
chr11	46677080	46700615	46688847	ENSG00000175220.11	-	protein_coding	KNOWN	ARHGAP1	7	13	0.838353
chr11	46700818	46705912	46703365	ENSG00000175213.2	+	protein_coding	KNOWN	ZNF408	5	5	0.943778
chr11	46719180	46739506	46729343	ENSG00000180210.14	+	protein_coding	KNOWN	F2	5	14	0.934999
chr11	46743048	46846308	46794678	ENSG00000175216.14	-	protein_coding	KNOWN	CKAP5	12	44	0.495187
chr11	46753125	46753192	46753158	ENSG00000263540.1	-	miRNA	KNOWN	MIR5582	1	1	0.723453
chr11	46758766	46758873	46758819	ENSG00000252427.1	-	snoRNA	NOVEL	SNORD67	1	1	0.723453
chr11	46762389	46762499	46762444	ENSG00000212135.1	-	snoRNA	KNOWN	SNORD67	1	1	0.723453
chr11	46846412	46874396	46860404	ENSG00000247675.6	+	antisense	KNOWN	LRP4-AS1	2	4	0.609894
chr11	46856868	46918642	46887755	ENSG00000134569.9	-	protein_coding	KNOWN	LRP4	5	38	0.695918
chr11	46936689	47164385	47050537	ENSG00000149179.13	+	protein_coding	KNOWN	C11orf49	23	10	0.364036
chr11	47041027	47041945	47041486	ENSG00000271350.1	-	processed_pseudogene	KNOWN	CTD-2384B9.1	1	1	0.067744
chr11	47123104	47130801	47126952	ENSG00000255520.1	-	antisense	KNOWN	RP11-390K5.3	1	2	0.289588
chr11	47164299	47177125	47170712	ENSG00000149182.14	-	protein_coding	KNOWN	ARFGAP2	30	16	0.950671
chr11	47168281	47169563	47168922	ENSG00000270060.1	-	sense_intronic	KNOWN	RP11-390K5.6	1	2	0.989693
chr11	47177525	47186443	47181984	ENSG00000165912.15	-	protein_coding	KNOWN	PACSIN3	11	11	0.919458
chr11	47179611	47179737	47179674	ENSG00000275208.1	-	miRNA	KNOWN	MIR6745	1	1	0.919458
chr11	47191181	47191542	47191361	ENSG00000243802.2	-	processed_pseudogene	KNOWN	RP11-390K5.1	1	1	0.923676
chr11	47214465	47239240	47226852	ENSG00000134574.11	+	protein_coding	KNOWN	DDB2	16	10	0.836935
chr11	47220218	47221751	47220984	ENSG00000256897.1	-	antisense	KNOWN	RP11-17G12.2	1	2	0.856019
chr11	47239302	47248906	47244104	ENSG00000134575.9	-	protein_coding	KNOWN	ACP2	14	11	0.804855
chr11	47248300	47269032	47258666	ENSG00000025434.18	+	protein_coding	KNOWN	NR1H3	35	10	1.024374
chr11	47269161	47330031	47299596	ENSG00000110514.19	+	protein_coding	KNOWN	MADD	23	36	1.049868
chr11	47270657	47272110	47271383	ENSG00000256746.5	-	antisense	KNOWN	RP11-17G12.3	2	3	1.043082
chr11	47331397	47352702	47342049	ENSG00000134571.10	-	protein_coding	KNOWN	MYBPC3	4	35	0.964181
chr11	47354860	47378576	47366718	ENSG00000066336.11	-	protein_coding	KNOWN	SPI1	4	5	0.830122
chr11	47383148	47409190	47396169	ENSG00000255197.5	-	antisense	KNOWN	RP11-750H9.5	3	4	0.973105
chr11	47400970	47401042	47401006	ENSG00000264583.1	+	miRNA	KNOWN	MIR4487	1	1	1.000743
chr11	47407132	47416501	47411816	ENSG00000165915.13	+	protein_coding	KNOWN	SLC39A13	13	11	1.199335
chr11	47418769	47426473	47422621	ENSG00000165916.8	-	protein_coding	KNOWN	PSMC3	13	12	1.286903
chr11	47437757	47449178	47443467	ENSG00000165917.9	-	protein_coding	KNOWN	RAPSN	5	8	1.087330
chr11	47465944	47565569	47515756	ENSG00000149187.17	-	protein_coding	KNOWN	CELF1	21	16	0.609202
chr11	47485822	47485913	47485867	ENSG00000265467.1	-	miRNA	NOVEL	AC090559.1	1	1	0.730535
chr11	47513605	47514889	47514247	ENSG00000270072.1	-	sense_intronic	KNOWN	RP11-750H9.7	1	2	0.654783
chr11	47557534	47557833	47557683	ENSG00000265559.2	-	misc_RNA	KNOWN	RN7SL652P	1	1	0.492012
chr11	47565336	47584562	47574949	ENSG00000213619.9	+	protein_coding	KNOWN	NDUFS3	13	7	0.804449
chr11	47565430	47573461	47569445	ENSG00000110536.13	+	protein_coding	KNOWN	PTPMT1	5	4	0.669823
chr11	47572197	47579015	47575606	ENSG00000123444.13	-	protein_coding	KNOWN	KBTBD4	10	4	0.904490
chr11	47576471	47576588	47576529	ENSG00000200376.1	-	snRNA	KNOWN	RNU5E-10P	1	1	0.904490
chr11	47577725	47578277	47578001	ENSG00000231880.2	+	antisense	KNOWN	RP11-76I23.7	1	1	0.904490
chr11	47586693	47589194	47587943	ENSG00000196666.4	+	protein_coding	KNOWN	FAM180B	1	3	0.904490
chr11	47589664	47594659	47592161	ENSG00000172247.3	-	protein_coding	KNOWN	C1QTNF4	2	2	0.601238
chr11	47614898	47614994	47614946	ENSG00000280615.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.469227
chr11	47617315	47642623	47629969	ENSG00000109919.9	-	protein_coding	KNOWN	MTCH2	6	13	0.429014
chr11	47659591	47715389	47687490	ENSG00000165923.15	-	protein_coding	KNOWN	AGBL2	14	19	0.485296
chr11	47716517	47767443	47741980	ENSG00000109920.12	-	protein_coding	KNOWN	FNBP4	16	17	0.503101
chr11	47726894	47726992	47726943	ENSG00000200090.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.434880
chr11	47778087	47848555	47813321	ENSG00000030066.13	-	protein_coding	KNOWN	NUP160	11	36	0.345767
chr11	47796169	47796379	47796274	ENSG00000271543.1	+	processed_pseudogene	KNOWN	RP11-692M12.5	1	1	0.458589
chr11	47804296	47804402	47804349	ENSG00000252941.1	-	rRNA	KNOWN	RNA5SP340	1	1	0.458589
chr11	47820200	47820289	47820244	ENSG00000252874.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.214198
chr11	47841324	47841682	47841503	ENSG00000271557.1	+	processed_pseudogene	KNOWN	YPEL5P2	1	1	0.278405
chr11	47905323	47905607	47905465	ENSG00000254780.1	-	processed_pseudogene	KNOWN	RP11-793I11.1	1	1	0.410353
chr11	47980558	48170841	48075699	ENSG00000149177.12	+	protein_coding	KNOWN	PTPRJ	8	26	0.487798
chr11	48014406	48015855	48015130	ENSG00000254879.1	-	antisense	KNOWN	PTPRJ-AS1	1	2	0.610123
chr11	48096782	48096858	48096820	ENSG00000263693.1	+	miRNA	KNOWN	MIR3161	1	1	0.259546
chr11	48216792	48217762	48217277	ENSG00000175619.2	+	protein_coding	KNOWN	OR4B1	1	1	-0.343103
chr11	48227429	48228310	48227869	ENSG00000255514.1	+	unprocessed_pseudogene	KNOWN	OR4B2P	1	1	-0.343103
chr11	48245056	48246080	48245568	ENSG00000172208.5	+	polymorphic_pseudogene	KNOWN	OR4X2	2	1	-0.032815
chr11	48245104	48246015	48245559	ENSG00000279556.1	+	protein_coding	KNOWN	OR4X2	1	1	-0.032815
chr11	48263861	48264778	48264319	ENSG00000176567.1	+	protein_coding	KNOWN	OR4X1	1	1	0.015540
chr11	48263861	48264778	48264319	ENSG00000279260.1	+	polymorphic_pseudogene	KNOWN	OR4X1	2	1	0.015540
chr11	48306223	48307152	48306687	ENSG00000176555.1	+	protein_coding	KNOWN	OR4S1	1	1	-0.237714
chr11	48324920	48328471	48326695	ENSG00000176547.8	+	protein_coding	KNOWN	OR4C3	2	3	-0.072544
chr11	48345351	48352447	48348899	ENSG00000197161.7	-	unprocessed_pseudogene	KNOWN	OR4C4P	1	2	-0.105671
chr11	48365485	48366465	48365975	ENSG00000176540.3	-	protein_coding	KNOWN	OR4C5	1	1	-0.048016
chr11	48420210	48421273	48420741	ENSG00000182565.8	+	unprocessed_pseudogene	KNOWN	OR4C2P	1	1	-0.203833
chr11	48432217	48433147	48432682	ENSG00000184789.6	-	unprocessed_pseudogene	KNOWN	OR4C10P	1	1	-0.373300
chr11	48464053	48464977	48464515	ENSG00000254925.1	-	unprocessed_pseudogene	KNOWN	OR4C9P	1	1	-0.240584
chr11	48486363	48486825	48486594	ENSG00000255215.1	-	unprocessed_pseudogene	KNOWN	OR4R1P	1	1	-0.312850
chr11	48488717	48489780	48489248	ENSG00000237388.2	+	protein_coding	KNOWN	OR4A47	1	1	-0.312850
chr11	48492026	48492416	48492221	ENSG00000255113.1	+	unprocessed_pseudogene	KNOWN	OR4A48P	1	1	-0.566971
chr11	48496348	48497280	48496814	ENSG00000255304.1	+	unprocessed_pseudogene	KNOWN	OR4A46P	1	1	-0.566971
chr11	48512273	48513220	48512746	ENSG00000254832.1	+	unprocessed_pseudogene	KNOWN	OR4A40P	1	1	-0.346450
chr11	48526064	48526971	48526517	ENSG00000255534.1	+	unprocessed_pseudogene	KNOWN	OR4A43P	1	1	-0.346450
chr11	48579436	48580336	48579886	ENSG00000213607.4	+	unprocessed_pseudogene	KNOWN	OR4A45P	1	1	-0.278377
chr11	48589760	48590687	48590223	ENSG00000255297.1	+	unprocessed_pseudogene	KNOWN	OR4A41P	1	1	-0.309199
chr11	48610063	48611000	48610531	ENSG00000254674.1	+	unprocessed_pseudogene	KNOWN	OR4A42P	1	1	-0.036332
chr11	48627546	48628493	48628019	ENSG00000255053.1	+	unprocessed_pseudogene	KNOWN	OR4A44P	1	1	-0.036332
chr11	48880111	48885237	48882674	ENSG00000255551.1	+	unprocessed_pseudogene	KNOWN	RP11-56P9.5	1	3	-0.082506
chr11	48881723	48902181	48891952	ENSG00000254728.1	-	unprocessed_pseudogene	KNOWN	RP11-56P9.10	1	10	0.000599
chr11	48893256	48898703	48895979	ENSG00000254920.1	+	unprocessed_pseudogene	KNOWN	RP11-56P9.6	1	4	0.057058
chr11	48907103	48908946	48908024	ENSG00000255527.1	+	unprocessed_pseudogene	KNOWN	RP11-56P9.4	1	2	0.057058
chr11	48945694	48951895	48948794	ENSG00000249910.3	+	unprocessed_pseudogene	KNOWN	TRIM51CP	1	6	0.047688
chr11	48959928	48961810	48960869	ENSG00000254517.1	+	unprocessed_pseudogene	KNOWN	RP11-56P9.8	1	4	-0.231953
chr11	48975501	48981695	48978598	ENSG00000220948.4	-	unprocessed_pseudogene	KNOWN	TRIM51GP	1	6	-0.348581
chr11	48985871	48991881	48988876	ENSG00000254764.1	-	unprocessed_pseudogene	KNOWN	TRIM53CP	1	5	-0.352867
chr11	49013943	49015894	49014918	ENSG00000205044.3	-	unprocessed_pseudogene	KNOWN	RP11-56P9.11	1	3	-0.529497
chr11	49027501	49038451	49032976	ENSG00000182053.12	+	protein_coding	KNOWN	TRIM49B	2	8	-0.469485
chr11	49053714	49059112	49056413	ENSG00000214891.8	-	protein_coding	KNOWN	TRIM64C	2	7	-0.151279
chr11	49067610	49069301	49068455	ENSG00000276637.1	+	unprocessed_pseudogene	KNOWN	CTD-2132H18.5	1	2	-0.151279
chr11	49070752	49071000	49070876	ENSG00000254801.1	-	processed_pseudogene	KNOWN	CTD-2132H18.3	1	1	-0.262925
chr11	49081907	49083097	49082502	ENSG00000229361.5	+	processed_pseudogene	KNOWN	UBTFL7	1	1	-0.262925
chr11	49092404	49092767	49092585	ENSG00000255452.1	+	processed_pseudogene	KNOWN	RP11-107P7.1	1	1	-0.202629
chr11	49098163	49101168	49099665	ENSG00000254412.1	-	processed_pseudogene	KNOWN	RP11-107P7.6	1	1	-0.202629
chr11	49110756	49111220	49110988	ENSG00000255338.1	+	processed_pseudogene	KNOWN	RP11-107P7.2	1	1	-0.559001
chr11	49117019	49124570	49120794	ENSG00000254993.1	-	unprocessed_pseudogene	KNOWN	TRIM77BP	1	4	-0.559001
chr11	49133653	49134800	49134226	ENSG00000254567.2	-	processed_pseudogene	KNOWN	UBTFL9	1	1	-0.273005
chr11	49146635	49208670	49177652	ENSG00000086205.16	-	protein_coding	KNOWN	FOLH1	14	20	-0.218116
chr11	49305714	49379669	49342691	ENSG00000255532.1	+	transcribed_unprocessed_pseudogene	KNOWN	CTD-2026G22.1	2	8	-0.405991
chr11	49405091	49415789	49410440	ENSG00000123447.6	-	unprocessed_pseudogene	KNOWN	TYRL	1	2	-0.427526
chr11	49406190	49406714	49406452	ENSG00000254496.1	+	processed_pseudogene	KNOWN	CBX3P8	1	1	-0.510353
chr11	49433480	49434438	49433959	ENSG00000226268.3	-	processed_pseudogene	KNOWN	RP11-61N20.3	1	1	-0.545438
chr11	49558546	49810419	49684482	ENSG00000205035.8	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-707M1.1	3	7	-0.523123
chr11	49817778	49825553	49821665	ENSG00000254487.2	+	unprocessed_pseudogene	KNOWN	RP11-707M1.7	1	5	-0.675645
chr11	49824839	49826724	49825781	ENSG00000255268.2	-	unprocessed_pseudogene	KNOWN	RP11-707M1.9	1	3	-0.675645
chr11	49833140	49839320	49836230	ENSG00000219061.4	-	unprocessed_pseudogene	KNOWN	TRIM51FP	1	10	-0.564276
chr11	49843488	49846533	49845010	ENSG00000265973.1	-	unprocessed_pseudogene	KNOWN	RP11-163O19.16	1	3	-0.564276
chr11	49850629	49862528	49856578	ENSG00000254714.1	+	unprocessed_pseudogene	KNOWN	RP11-163O19.1	1	8	-0.389279
chr11	49854080	49859402	49856741	ENSG00000255550.1	-	unprocessed_pseudogene	KNOWN	RP11-163O19.11	1	4	-0.389279
chr11	49871826	49874067	49872946	ENSG00000255214.1	-	unprocessed_pseudogene	KNOWN	RP11-163O19.10	1	2	-0.406462
chr11	49874945	49876638	49875791	ENSG00000255190.2	+	processed_pseudogene	KNOWN	TRIM51DP	1	2	-0.406462
chr11	49882999	49884093	49883546	ENSG00000254800.2	+	processed_pseudogene	KNOWN	RP11-163O19.3	1	2	-0.406462
chr11	49892262	49893777	49893019	ENSG00000255111.1	-	processed_pseudogene	KNOWN	RP11-163O19.8	1	1	0.124232
chr11	49898267	49899186	49898726	ENSG00000254408.1	-	unprocessed_pseudogene	KNOWN	OR4A1P	1	1	0.124232
chr11	49915013	49915644	49915328	ENSG00000254472.1	-	unprocessed_pseudogene	KNOWN	OR4A49P	1	1	-0.775253
chr11	49917391	49918478	49917934	ENSG00000254637.1	-	unprocessed_pseudogene	KNOWN	OR4A18P	1	1	-0.775253
chr11	49920312	49921414	49920863	ENSG00000254940.1	-	unprocessed_pseudogene	KNOWN	OR4A19P	1	1	-0.775253
chr11	49923049	49923886	49923467	ENSG00000254624.1	+	unprocessed_pseudogene	KNOWN	OR4R3P	1	1	-0.775253
chr11	49952391	49953419	49952905	ENSG00000258817.1	+	protein_coding	KNOWN	OR4C13	1	1	-0.598153
chr11	49981473	49982535	49982004	ENSG00000221954.2	-	protein_coding	KNOWN	OR4C12	1	1	-0.020902
chr11	50032874	50033794	50033334	ENSG00000260811.1	+	unprocessed_pseudogene	KNOWN	OR4C45	1	1	0.004044
chr11	50053410	50054309	50053859	ENSG00000260595.1	-	unprocessed_pseudogene	KNOWN	OR4C49P	1	1	-0.521950
chr11	50100892	50102898	50101895	ENSG00000255199.2	-	unprocessed_pseudogene	KNOWN	GTF2IP11	1	3	0.044943
chr11	50170156	50190441	50180298	ENSG00000255442.1	+	unprocessed_pseudogene	KNOWN	RP11-347H15.1	1	3	-0.451007
chr11	50246554	50247761	50247157	ENSG00000236919.3	-	unprocessed_pseudogene	KNOWN	RP11-347H15.6	1	4	-0.185789
chr11	50268161	50269273	50268717	ENSG00000255500.2	+	processed_pseudogene	KNOWN	RP11-347H15.2	1	1	0.091992
chr11	50287661	50295334	50291497	ENSG00000255042.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-347H15.5	1	3	-0.088158
chr11	50290749	50290933	50290841	ENSG00000255001.1	+	processed_pseudogene	KNOWN	RP11-347H15.3	1	1	-0.119984
chr11	50298579	50304656	50301617	ENSG00000254518.1	+	lincRNA	KNOWN	RP11-347H15.4	2	3	-0.119984
chr11	50307681	50361706	50334693	ENSG00000254840.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-574M7.1	4	7	-0.097754
chr11	50409042	50422316	50415679	ENSG00000214883.4	+	unprocessed_pseudogene	KNOWN	RP11-574M7.2	1	8	-0.571893
chr11	54591480	54592409	54591944	ENSG00000237610.1	+	unprocessed_pseudogene	KNOWN	OR4C50P	1	1	-0.192889
chr11	54603069	54603998	54603533	ENSG00000185926.1	-	protein_coding	KNOWN	OR4C46	1	1	-0.192889
chr11	54635037	54635955	54635496	ENSG00000255312.1	-	unprocessed_pseudogene	KNOWN	OR4C7P	1	1	0.272564
chr11	54657120	54657716	54657418	ENSG00000255560.1	-	unprocessed_pseudogene	KNOWN	OR4R2P	1	1	-0.349198
chr11	54659666	54660595	54660130	ENSG00000254769.3	+	unprocessed_pseudogene	KNOWN	OR4A4P	1	1	-0.349198
chr11	54662580	54663450	54663015	ENSG00000254464.1	+	unprocessed_pseudogene	KNOWN	OR4A3P	1	1	-0.349198
chr11	54667298	54668210	54667754	ENSG00000227547.3	+	unprocessed_pseudogene	KNOWN	OR4A2P	1	1	-0.349198
chr11	54682877	54683821	54683349	ENSG00000225997.1	+	polymorphic_pseudogene	KNOWN	OR4A8	1	1	-0.589479
chr11	54692450	54693359	54692904	ENSG00000255349.1	+	unprocessed_pseudogene	KNOWN	OR4A7P	1	1	-0.852665
chr11	54706885	54707832	54707358	ENSG00000221840.3	+	protein_coding	KNOWN	OR4A5	1	1	-0.852665
chr11	54724847	54725816	54725331	ENSG00000255078.1	+	unprocessed_pseudogene	KNOWN	OR4A6P	1	1	-0.348581
chr11	54855186	54855271	54855228	ENSG00000264637.1	+	miRNA	NOVEL	AC110283.1	1	1	0.065520
chr11	55262182	55271119	55266650	ENSG00000150244.11	+	protein_coding	KNOWN	TRIM48	1	6	0.045705
chr11	55267408	55267636	55267522	ENSG00000255543.1	+	processed_pseudogene	KNOWN	RP11-72M10.2	1	1	0.108866
chr11	55279447	55284749	55282098	ENSG00000255283.3	-	unprocessed_pseudogene	KNOWN	RP11-72M10.4	1	4	-0.395123
chr11	55279949	55280289	55280119	ENSG00000255110.1	+	unprocessed_pseudogene	KNOWN	RP11-72M10.8	1	1	-0.395123
chr11	55282502	55282977	55282739	ENSG00000254696.1	+	unprocessed_pseudogene	KNOWN	RP11-72M10.7	1	1	-0.395123
chr11	55291883	55298270	55295076	ENSG00000166007.11	-	transcribed_unprocessed_pseudogene	KNOWN	TRIM51HP	2	5	-0.043785
chr11	55302290	55305060	55303675	ENSG00000254828.1	-	unprocessed_pseudogene	KNOWN	RP11-72M10.5	1	3	-0.043785
chr11	55318560	55319465	55319012	ENSG00000254663.1	+	unprocessed_pseudogene	KNOWN	OR4A11P	1	1	-0.480147
chr11	55325756	55326673	55326214	ENSG00000254723.1	+	unprocessed_pseudogene	KNOWN	OR4A12P	1	1	-0.480147
chr11	55343201	55344187	55343694	ENSG00000181961.3	+	protein_coding	KNOWN	OR4A16	1	1	-0.345072
chr11	55367884	55368918	55368401	ENSG00000181958.3	+	protein_coding	KNOWN	OR4A15	1	1	-0.266056
chr11	55388529	55389472	55389000	ENSG00000254891.1	+	unprocessed_pseudogene	KNOWN	OR4A9P	1	1	-0.398755
chr11	55411526	55411717	55411621	ENSG00000255077.1	+	unprocessed_pseudogene	KNOWN	OR4X7P	1	1	-0.398536
chr11	55430487	55430994	55430740	ENSG00000255493.1	+	unprocessed_pseudogene	KNOWN	RP11-131J4.12	1	1	-0.483868
chr11	55431957	55432367	55432162	ENSG00000254886.1	+	unprocessed_pseudogene	KNOWN	OR4A10P	1	1	-0.483868
chr11	55444435	55445338	55444886	ENSG00000255196.1	+	unprocessed_pseudogene	KNOWN	OR4A17P	1	1	-0.483868
chr11	55466771	55467712	55467241	ENSG00000181950.3	+	unprocessed_pseudogene	KNOWN	OR4A13P	1	1	-0.670969
chr11	55475943	55476428	55476185	ENSG00000255294.1	+	unprocessed_pseudogene	KNOWN	OR4A50P	1	1	-0.171043
chr11	55477551	55478509	55478030	ENSG00000254962.1	+	unprocessed_pseudogene	KNOWN	OR4A14P	1	1	-0.171043
chr11	55491152	55492142	55491647	ENSG00000181943.4	+	unprocessed_pseudogene	KNOWN	OR4A21P	1	1	-0.185542
chr11	55509741	55510671	55510206	ENSG00000254576.1	+	unprocessed_pseudogene	KNOWN	OR4C1P	1	1	-0.002924
chr11	55537002	55537924	55537463	ENSG00000233301.1	+	unprocessed_pseudogene	KNOWN	OR4C14P	1	1	-0.266903
chr11	55554307	55555419	55554863	ENSG00000181939.2	+	protein_coding	KNOWN	OR4C15	1	1	-0.337996
chr11	55572128	55573060	55572594	ENSG00000279514.1	+	polymorphic_pseudogene	KNOWN	OR4C16	2	1	-0.300326
chr11	55572128	55573060	55572594	ENSG00000181935.3	+	protein_coding	KNOWN	OR4C16	1	1	-0.300326
chr11	55603354	55604398	55603876	ENSG00000172188.4	-	protein_coding	KNOWN	OR4C11	1	1	-0.176711
chr11	55638358	55639296	55638827	ENSG00000181927.2	+	protein_coding	KNOWN	OR4P4	1	1	-0.239214
chr11	55650904	55651839	55651371	ENSG00000174982.2	+	protein_coding	KNOWN	OR4S2	1	1	-0.219210
chr11	55665167	55666096	55665631	ENSG00000181903.4	+	protein_coding	KNOWN	OR4C6	1	1	-0.219210
chr11	55673536	55674675	55674105	ENSG00000254841.1	+	unprocessed_pseudogene	KNOWN	OR4V1P	1	1	0.091992
chr11	55683239	55684374	55683806	ENSG00000188439.3	+	unprocessed_pseudogene	KNOWN	OR4P1P	1	1	0.091992
chr11	55684141	55686160	55685150	ENSG00000254804.1	-	lincRNA	KNOWN	RP11-674C21.9	1	2	0.091992
chr11	55714996	55715632	55715314	ENSG00000254457.1	+	unprocessed_pseudogene	KNOWN	OR5D2P	1	1	-0.238654
chr11	55726118	55727158	55726638	ENSG00000186886.6	+	unprocessed_pseudogene	KNOWN	OR5D3P	1	1	-0.238654
chr11	55754976	55755953	55755464	ENSG00000181837.6	+	unprocessed_pseudogene	KNOWN	OR5D17P	1	1	-0.635482
chr11	55773438	55774382	55773910	ENSG00000198877.1	+	protein_coding	KNOWN	OR5D13	1	1	-0.174795
chr11	55773438	55774382	55773910	ENSG00000279761.1	+	polymorphic_pseudogene	KNOWN	OR5D13	2	1	-0.174795
chr11	55786964	55787905	55787434	ENSG00000255019.1	+	unprocessed_pseudogene	KNOWN	OR5D15P	1	1	-0.174795
chr11	55795556	55796500	55796028	ENSG00000186113.1	+	protein_coding	KNOWN	OR5D14	1	1	-0.706374
chr11	55811367	55812476	55811921	ENSG00000279395.1	+	polymorphic_pseudogene	KNOWN	OR5L1	2	1	-0.662896
chr11	55811467	55812402	55811934	ENSG00000186117.3	+	protein_coding	KNOWN	OR5L1	1	1	-0.662896
chr11	55819630	55820571	55820100	ENSG00000186119.7	+	protein_coding	KNOWN	OR5D18	1	1	-0.662896
chr11	55827219	55828154	55827686	ENSG00000205030.1	+	protein_coding	KNOWN	OR5L2	1	1	-0.662896
chr11	55838752	55839738	55839245	ENSG00000205029.1	+	protein_coding	KNOWN	OR5D16	1	1	-0.462208
chr11	55855592	55856512	55856052	ENSG00000186124.3	+	unprocessed_pseudogene	KNOWN	OR9M1P	1	1	-0.748942
chr11	55863932	55881243	55872587	ENSG00000255204.1	+	unprocessed_pseudogene	KNOWN	RP11-738O11.9	1	2	-0.300916
chr11	55865709	55865820	55865764	ENSG00000255499.1	+	processed_pseudogene	KNOWN	RP11-738O11.12	1	1	-0.748942
chr11	55867569	55874537	55871053	ENSG00000254547.1	-	unprocessed_pseudogene	KNOWN	RP11-738O11.13	1	4	-0.299720
chr11	55883297	55891810	55887553	ENSG00000124900.12	+	protein_coding	KNOWN	TRIM51	2	7	-0.097821
chr11	55903341	55904278	55903809	ENSG00000227806.1	-	unprocessed_pseudogene	KNOWN	OR5W1P	1	1	-0.240852
chr11	55913650	55914582	55914116	ENSG00000187612.1	-	protein_coding	KNOWN	OR5W2	1	1	-0.389877
chr11	55935456	55936400	55935928	ENSG00000167825.3	-	protein_coding	KNOWN	OR5I1	1	1	-0.586080
chr11	55948120	55948924	55948522	ENSG00000255416.1	-	unprocessed_pseudogene	KNOWN	OR10AF1P	1	1	-0.586080
chr11	55957216	55957630	55957423	ENSG00000254807.1	-	unprocessed_pseudogene	KNOWN	OR10AK1P	1	1	-0.329835
chr11	55967558	55968463	55968010	ENSG00000174970.3	-	protein_coding	KNOWN	OR10AG1	1	1	-0.329835
chr11	55979398	55980103	55979750	ENSG00000214880.3	-	unprocessed_pseudogene	KNOWN	OR7E5P	1	1	-0.147474
chr11	55993681	55994625	55994153	ENSG00000149133.1	-	protein_coding	KNOWN	OR5F1	1	1	-0.262117
chr11	56015017	56015957	56015487	ENSG00000182365.4	-	unprocessed_pseudogene	KNOWN	OR5F2P	1	1	-0.373231
chr11	56030419	56031393	56030906	ENSG00000181785.1	+	protein_coding	KNOWN	OR5AS1	1	1	-0.592806
chr11	56054364	56055299	56054831	ENSG00000184741.5	+	unprocessed_pseudogene	KNOWN	OR5AQ1P	1	1	-0.229936
chr11	56071111	56072049	56071580	ENSG00000181780.4	+	unprocessed_pseudogene	KNOWN	OR5J1P	1	1	-0.476292
chr11	56082801	56083739	56083270	ENSG00000225538.1	+	unprocessed_pseudogene	KNOWN	OR5BE1P	1	1	-0.476292
chr11	56093308	56094240	56093774	ENSG00000172154.8	+	protein_coding	KNOWN	OR8I2	2	1	-0.616119
chr11	56097244	56097384	56097314	ENSG00000254524.1	-	unprocessed_pseudogene	KNOWN	OR8I4P	1	1	-0.616119
chr11	56105018	56106055	56105536	ENSG00000181767.2	+	protein_coding	KNOWN	OR8H2	2	1	-0.616119
chr11	56116639	56117256	56116947	ENSG00000255140.1	-	unprocessed_pseudogene	KNOWN	OR5BN2P	1	1	-0.790172
chr11	56122373	56123311	56122842	ENSG00000181761.5	+	protein_coding	KNOWN	OR8H3	1	1	-0.790172
chr11	56132666	56133494	56133080	ENSG00000254848.1	-	unprocessed_pseudogene	KNOWN	OR5BN1P	1	1	-0.470428
chr11	56136771	56137718	56137244	ENSG00000167822.1	-	protein_coding	KNOWN	OR8J3	1	1	-0.470428
chr11	56142516	56143387	56142951	ENSG00000254947.1	-	unprocessed_pseudogene	KNOWN	OR8K4P	1	1	-0.470428
chr11	56159394	56160317	56159855	ENSG00000181752.3	-	protein_coding	KNOWN	OR8K5	1	1	-0.416155
chr11	56165500	56165921	56165710	ENSG00000255217.1	+	unprocessed_pseudogene	KNOWN	OR5J7P	1	1	-0.416155
chr11	56176618	56177556	56177087	ENSG00000174957.1	+	protein_coding	KNOWN	OR5J2	1	1	-0.553577
chr11	56188379	56189251	56188815	ENSG00000230213.1	-	unprocessed_pseudogene	KNOWN	OR8V1P	1	1	-0.553577
chr11	56205125	56205625	56205375	ENSG00000213604.4	-	processed_pseudogene	KNOWN	RP11-444K7.8	1	1	-0.803900
chr11	56210873	56211820	56211346	ENSG00000254658.2	-	polymorphic_pseudogene	KNOWN	OR8J2	1	1	-0.687882
chr11	56232106	56233185	56232645	ENSG00000181718.5	-	protein_coding	KNOWN	OR5T2	1	1	-0.347293
chr11	56252200	56253222	56252711	ENSG00000172489.5	+	protein_coding	KNOWN	OR5T3	1	1	-0.361919
chr11	56275639	56276619	56276129	ENSG00000181698.3	+	protein_coding	KNOWN	OR5T1	1	1	-0.194531
chr11	56290053	56291090	56290571	ENSG00000181693.7	-	protein_coding	KNOWN	OR8H1	2	2	-0.422581
chr11	56296541	56297471	56297006	ENSG00000255461.1	-	unprocessed_pseudogene	KNOWN	OR8I1P	1	1	-0.422581
chr11	56318307	56319245	56318776	ENSG00000181689.1	+	protein_coding	KNOWN	OR8K3	1	1	-0.502016
chr11	56318307	56319245	56318776	ENSG00000280314.1	+	polymorphic_pseudogene	KNOWN	OR8K3	2	1	-0.502016
chr11	56331347	56332488	56331917	ENSG00000254722.1	-	unprocessed_pseudogene	KNOWN	FAM8A2P	1	1	0.032753
chr11	56335142	56336068	56335605	ENSG00000255134.1	+	unprocessed_pseudogene	KNOWN	OR8K2P	1	1	0.032753
chr11	56346039	56346998	56346518	ENSG00000150261.3	+	protein_coding	KNOWN	OR8K1	1	1	0.032753
chr11	56357328	56358221	56357774	ENSG00000242208.1	+	processed_pseudogene	KNOWN	RPL5P29	1	1	-0.779684
chr11	56360215	56361288	56360751	ENSG00000172487.3	+	protein_coding	KNOWN	OR8J1	1	1	-0.779684
chr11	56375624	56376553	56376088	ENSG00000172199.1	+	protein_coding	KNOWN	OR8U1	1	1	-0.557676
chr11	56381635	56382589	56382112	ENSG00000254903.1	+	unprocessed_pseudogene	KNOWN	OR8L1P	1	1	-0.557676
chr11	56393729	56394648	56394188	ENSG00000255466.1	+	unprocessed_pseudogene	KNOWN	OR5AL2P	1	1	-0.497458
chr11	56412696	56413680	56413188	ENSG00000272987.1	+	polymorphic_pseudogene	KNOWN	OR5AL1	1	1	-0.328584
chr11	56412744	56413668	56413206	ENSG00000181395.6	+	pseudogene	KNOWN	OR5AL1	1	2	-0.328584
chr11	56417258	56418232	56417745	ENSG00000174942.1	-	protein_coding	KNOWN	OR5R1	1	1	-0.328584
chr11	56417258	56418232	56417745	ENSG00000279961.1	-	polymorphic_pseudogene	KNOWN	OR5R1	2	1	-0.328584
chr11	56448668	56449592	56449130	ENSG00000230416.3	+	unprocessed_pseudogene	KNOWN	OR5M4P	1	1	-0.239717
chr11	56462469	56463401	56462935	ENSG00000150269.1	-	protein_coding	KNOWN	OR5M9	1	1	-0.211789
chr11	56469574	56470497	56470035	ENSG00000174937.3	-	protein_coding	KNOWN	OR5M3	1	1	-0.391808
chr11	56479492	56480427	56479959	ENSG00000254752.1	-	unprocessed_pseudogene	KNOWN	OR5M2P	1	1	-0.545438
chr11	56490435	56491370	56490902	ENSG00000181371.3	-	protein_coding	KNOWN	OR5M8	1	1	0.044057
chr11	56495760	56496412	56496086	ENSG00000254411.1	+	processed_pseudogene	KNOWN	CTD-3051L14.13	1	1	0.044057
chr11	56500300	56501271	56500785	ENSG00000254490.1	-	unprocessed_pseudogene	KNOWN	OR5M7P	1	1	0.044057
chr11	56509573	56510195	56509884	ENSG00000254660.1	+	processed_pseudogene	KNOWN	CTD-3051L14.14	1	1	-0.078974
chr11	56512235	56513171	56512703	ENSG00000254603.1	-	unprocessed_pseudogene	KNOWN	OR5M6P	1	1	-0.346378
chr11	56526568	56527503	56527035	ENSG00000185701.7	-	unprocessed_pseudogene	KNOWN	OR5M5P	1	1	-0.346378
chr11	56542340	56543257	56542798	ENSG00000255223.3	-	protein_coding	KNOWN	OR5M11	1	1	-0.114459
chr11	56576774	56577721	56577247	ENSG00000254834.3	-	protein_coding	KNOWN	OR5M10	1	1	-0.254333
chr11	56597426	56598362	56597894	ENSG00000166693.7	-	unprocessed_pseudogene	KNOWN	OR5M13P	1	1	-0.139678
chr11	56612555	56613502	56613028	ENSG00000255012.1	-	protein_coding	KNOWN	OR5M1	1	1	-0.336851
chr11	56619779	56620810	56620294	ENSG00000255172.2	-	unprocessed_pseudogene	KNOWN	OR5AM1P	1	1	-0.336851
chr11	56628932	56629860	56629396	ENSG00000197866.3	+	unprocessed_pseudogene	KNOWN	OR5M12P	1	1	-0.336851
chr11	56633164	56634103	56633633	ENSG00000254795.1	-	unprocessed_pseudogene	KNOWN	OR5AP1P	1	1	-0.271756
chr11	56641466	56642471	56641968	ENSG00000172464.2	-	protein_coding	KNOWN	OR5AP2	2	1	-0.271756
chr11	56663662	56664687	56664174	ENSG00000172459.3	+	polymorphic_pseudogene	KNOWN	OR5AR1	2	1	-0.292672
chr11	56663686	56664618	56664152	ENSG00000279911.1	+	protein_coding	KNOWN	OR5AR1	1	1	-0.292672
chr11	56669017	56669944	56669480	ENSG00000232511.3	-	unprocessed_pseudogene	KNOWN	OR2AH1P	1	1	-0.292672
chr11	56690465	56690723	56690594	ENSG00000238041.3	+	processed_pseudogene	KNOWN	RP11-59K5.1	1	1	-0.189421
chr11	56700388	56701305	56700846	ENSG00000174914.1	+	protein_coding	KNOWN	OR9G1	1	1	-0.189421
chr11	56736316	56736462	56736389	ENSG00000254953.1	-	processed_pseudogene	KNOWN	RP11-100N3.2	1	1	-0.296862
chr11	56740179	56741096	56740637	ENSG00000181325.7	+	unprocessed_pseudogene	KNOWN	OR9G3P	1	1	-0.296862
chr11	56742827	56743811	56743319	ENSG00000172457.5	-	protein_coding	KNOWN	OR9G4	1	1	-0.296862
chr11	56743873	56743981	56743927	ENSG00000274770.1	+	miRNA	KNOWN	MIR6128	1	1	-0.296862
chr11	56751023	56751902	56751462	ENSG00000254825.1	-	unprocessed_pseudogene	KNOWN	OR9G2P	1	1	-0.368370
chr11	56775261	56776206	56775733	ENSG00000181296.3	-	unprocessed_pseudogene	KNOWN	OR5G1P	1	1	-0.142473
chr11	56790206	56790965	56790585	ENSG00000255485.1	-	unprocessed_pseudogene	KNOWN	OR5G4P	1	1	-0.389877
chr11	56801856	56820422	56811139	ENSG00000205025.8	-	transcribed_unprocessed_pseudogene	KNOWN	OR5G5P	4	3	-0.174474
chr11	56819576	56820504	56820040	ENSG00000241356.1	-	polymorphic_pseudogene	KNOWN	OR5G3	1	1	-0.006189
chr11	56848478	56878078	56863278	ENSG00000255433.5	+	lincRNA	KNOWN	AP000479.1	2	4	-0.247760
chr11	56890613	56927885	56909249	ENSG00000274150.1	+	unprocessed_pseudogene	KNOWN	FADS2P1	1	12	-0.017782
chr11	56970850	56972146	56971498	ENSG00000181282.4	+	unprocessed_pseudogene	KNOWN	OR5AK3P	1	1	-0.029999
chr11	56988872	56989867	56989369	ENSG00000181273.2	+	protein_coding	KNOWN	OR5AK2	1	1	-0.029999
chr11	57018100	57018886	57018493	ENSG00000255083.1	+	unprocessed_pseudogene	KNOWN	OR5AK1P	1	1	-0.235583
chr11	57029408	57029722	57029565	ENSG00000273228.1	+	unprocessed_pseudogene	KNOWN	OR5BQ1P	1	1	-0.235583
chr11	57037437	57037534	57037485	ENSG00000224196.1	+	unprocessed_pseudogene	KNOWN	OR5AK4P	1	1	-0.360520
chr11	57045091	57045390	57045240	ENSG00000272676.1	+	unprocessed_pseudogene	KNOWN	OR5AO1P	1	1	-0.360520
chr11	57055587	57056132	57055859	ENSG00000273255.1	+	unprocessed_pseudogene	KNOWN	OR5BP1P	1	1	-0.163847
chr11	57137920	57138064	57137992	ENSG00000281575.1	-	miRNA	NOVEL	AP001786.1	1	1	0.304653
chr11	57181747	57191717	57186732	ENSG00000183908.5	+	protein_coding	KNOWN	LRRC55	1	2	-0.026683
chr11	57233577	57237314	57235445	ENSG00000134817.10	-	protein_coding	KNOWN	APLNR	3	2	0.203275
chr11	57299638	57324952	57312295	ENSG00000149115.13	-	protein_coding	KNOWN	TNKS1BP1	7	12	0.858625
chr11	57325603	57327958	57326780	ENSG00000254662.1	+	antisense	KNOWN	RP11-872D17.4	1	2	0.999426
chr11	57325985	57335877	57330931	ENSG00000149136.8	-	protein_coding	KNOWN	SSRP1	5	17	0.898130
chr11	57338374	57370600	57354487	ENSG00000109991.8	+	protein_coding	KNOWN	P2RX3	4	13	0.741408
chr11	57359722	57359821	57359771	ENSG00000266018.1	+	miRNA	NOVEL	AP000781.1	1	1	0.697274
chr11	57376769	57381150	57378959	ENSG00000156575.2	-	protein_coding	KNOWN	PRG3	1	6	0.516641
chr11	57386794	57390657	57388725	ENSG00000186652.9	-	protein_coding	KNOWN	PRG2	4	6	0.498197
chr11	57387365	57424059	57405712	ENSG00000254979.5	-	protein_coding	KNOWN	RP11-872D17.8	3	13	0.399210
chr11	57406954	57427580	57417267	ENSG00000134802.17	-	protein_coding	KNOWN	SLC43A3	26	14	0.370715
chr11	57450183	57450299	57450241	ENSG00000252070.1	+	rRNA	KNOWN	RNA5SP341	1	1	0.543249
chr11	57451690	57452022	57451856	ENSG00000222998.1	+	misc_RNA	KNOWN	RN7SKP259	1	1	0.543249
chr11	57460549	57477534	57469041	ENSG00000186907.7	+	protein_coding	KNOWN	RTN4RL2	3	3	0.622294
chr11	57476493	57477534	57477013	ENSG00000255301.1	-	antisense	KNOWN	RP11-624G17.3	1	2	0.721429
chr11	57484534	57515786	57500160	ENSG00000149150.8	-	protein_coding	KNOWN	SLC43A1	10	15	0.586906
chr11	57510559	57510644	57510601	ENSG00000280581.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.253630
chr11	57528085	57528365	57528225	ENSG00000265566.2	-	misc_RNA	KNOWN	RN7SL605P	1	1	0.253630
chr11	57528463	57530803	57529633	ENSG00000134809.8	-	protein_coding	KNOWN	TIMM10	3	3	0.365259
chr11	57542641	57550274	57546457	ENSG00000214872.8	+	protein_coding	KNOWN	SMTNL1	2	8	0.570649
chr11	57551656	57568284	57559970	ENSG00000156587.15	-	protein_coding	KNOWN	UBE2L6	5	4	0.360053
chr11	57576292	57577080	57576686	ENSG00000240371.1	-	processed_pseudogene	KNOWN	RPS4XP13	1	1	0.627151
chr11	57597387	57614853	57606120	ENSG00000149131.15	+	protein_coding	KNOWN	SERPING1	13	8	0.477191
chr11	57638024	57652790	57645407	ENSG00000254602.1	+	sense_overlapping	KNOWN	AP000662.4	5	2	0.591630
chr11	57641198	57641286	57641242	ENSG00000208009.1	+	miRNA	KNOWN	MIR130A	1	1	0.546558
chr11	57645087	57649944	57647515	ENSG00000166793.10	-	protein_coding	KNOWN	YPEL4	10	5	0.546558
chr11	57648992	57661868	57655430	ENSG00000172409.5	+	protein_coding	KNOWN	CLP1	6	3	0.766365
chr11	57667747	57701187	57684467	ENSG00000156599.10	+	protein_coding	KNOWN	ZDHHC5	8	12	0.771637
chr11	57703714	57712221	57707967	ENSG00000156603.14	-	protein_coding	KNOWN	MED19	4	5	0.756987
chr11	57712600	57740973	57726786	ENSG00000213593.9	+	protein_coding	KNOWN	TMX2	9	8	0.498372
chr11	57712605	57791586	57752095	ENSG00000254462.1	+	protein_coding	KNOWN	TMX2-CTNND1	1	4	0.573416
chr11	57718044	57718530	57718287	ENSG00000213592.4	-	processed_pseudogene	KNOWN	AP000662.9	1	1	0.596034
chr11	57741250	57743554	57742402	ENSG00000211450.9	+	protein_coding	KNOWN	C11orf31	7	5	0.343531
chr11	57742163	57793243	57767703	ENSG00000254732.1	+	protein_coding	KNOWN	RP11-691N7.6	1	4	0.618239
chr11	57743514	57751781	57747647	ENSG00000233436.7	-	protein_coding	KNOWN	BTBD18	3	3	0.481820
chr11	57753243	57819546	57786394	ENSG00000198561.13	+	protein_coding	KNOWN	CTNND1	38	21	0.552953
chr11	57866298	57867279	57866788	ENSG00000255303.1	-	unprocessed_pseudogene	KNOWN	OR5BA1P	1	1	-0.098439
chr11	57870322	57870571	57870446	ENSG00000255266.1	-	processed_pseudogene	KNOWN	RP11-734C14.2	1	1	0.107340
chr11	57917297	57918239	57917768	ENSG00000180714.3	-	unprocessed_pseudogene	KNOWN	OR5AZ1P	1	1	-0.068899
chr11	57945598	57946414	57946006	ENSG00000254749.1	-	unprocessed_pseudogene	KNOWN	OR5BD1P	1	1	-0.126648
chr11	58005386	58005705	58005545	ENSG00000254601.1	+	processed_pseudogene	KNOWN	CYCSP26	1	1	0.139298
chr11	58023881	58181616	58102748	ENSG00000186509.4	+	protein_coding	KNOWN	OR9Q1	2	3	0.026455
chr11	58026706	58026812	58026759	ENSG00000200817.1	-	snRNA	KNOWN	RNU6-899P	1	1	0.059931
chr11	58030930	58031931	58031430	ENSG00000279051.3	+	polymorphic_pseudogene	KNOWN	OR6Q1	2	1	0.333000
chr11	58030953	58031906	58031429	ENSG00000172381.4	+	protein_coding	KNOWN	OR6Q1	1	1	0.333000
chr11	58040708	58041660	58041184	ENSG00000236541.1	-	unitary_pseudogene	KNOWN	VN2R9P	1	1	0.333000
chr11	58044110	58060138	58052124	ENSG00000255146.1	-	lincRNA	KNOWN	RP11-659P15.1	1	4	0.298008
chr11	58072378	58075438	58073908	ENSG00000254853.1	-	processed_pseudogene	KNOWN	RP11-659P15.2	1	2	0.035408
chr11	58077348	58078603	58077975	ENSG00000255131.2	-	unprocessed_pseudogene	KNOWN	OR9L1P	1	2	0.035408
chr11	58108720	58109661	58109190	ENSG00000272685.1	-	unprocessed_pseudogene	KNOWN	OR9I3P	1	1	-0.281467
chr11	58118500	58119444	58118972	ENSG00000172377.1	-	protein_coding	KNOWN	OR9I1	1	1	0.059387
chr11	58144495	58145397	58144946	ENSG00000186508.4	+	unprocessed_pseudogene	KNOWN	OR9I2P	1	1	-0.010491
chr11	58171098	58171721	58171409	ENSG00000272569.1	+	unprocessed_pseudogene	KNOWN	OR5BL1P	1	1	-0.079863
chr11	58190434	58191518	58190976	ENSG00000186513.2	+	protein_coding	KNOWN	OR9Q2	1	1	-0.080993
chr11	58203202	58204181	58203691	ENSG00000197887.3	-	protein_coding	KNOWN	OR1S2	1	1	-0.080993
chr11	58214745	58215722	58215233	ENSG00000172774.7	+	protein_coding	KNOWN	OR1S1	1	1	-0.151934
chr11	58214745	58215723	58215234	ENSG00000280204.1	+	polymorphic_pseudogene	KNOWN	OR1S1	2	1	-0.151934
chr11	58227882	58228918	58228400	ENSG00000180475.4	-	protein_coding	KNOWN	OR10Q1	1	1	-0.151934
chr11	58242043	58243097	58242570	ENSG00000254589.1	-	processed_pseudogene	KNOWN	EIF4A2P3	1	1	-0.123468
chr11	58266792	58268260	58267526	ENSG00000172772.3	-	protein_coding	KNOWN	OR10W1	1	1	-0.017886
chr11	58291826	58292765	58292295	ENSG00000272900.1	-	unprocessed_pseudogene	KNOWN	OR10Q2P	1	1	0.046188
chr11	58317637	58318375	58318006	ENSG00000255218.1	-	unprocessed_pseudogene	KNOWN	OR5BC1P	1	1	0.193687
chr11	58343737	58344664	58344200	ENSG00000255431.1	-	unprocessed_pseudogene	KNOWN	OR5B19P	1	1	0.080587
chr11	58348989	58349630	58349309	ENSG00000255096.2	-	unprocessed_pseudogene	KNOWN	OR5B10P	1	1	0.080587
chr11	58354004	58354499	58354251	ENSG00000255333.1	-	processed_pseudogene	KNOWN	AP000435.3	1	1	-0.126009
chr11	58358124	58359069	58358596	ENSG00000197786.3	-	protein_coding	KNOWN	OR5B17	1	1	-0.126009
chr11	58365836	58366763	58366299	ENSG00000233499.1	-	unprocessed_pseudogene	KNOWN	OR5B1P	1	1	-0.126009
chr11	58387583	58388486	58388034	ENSG00000273408.1	-	unprocessed_pseudogene	KNOWN	OR5B15P	1	1	-0.305768
chr11	58402464	58403409	58402936	ENSG00000172769.2	-	protein_coding	KNOWN	OR5B3	1	1	0.036282
chr11	58422265	58423313	58422789	ENSG00000172365.2	-	protein_coding	KNOWN	OR5B2	1	1	-0.149826
chr11	58439120	58440173	58439646	ENSG00000172362.2	-	protein_coding	KNOWN	OR5B12	1	1	-0.141965
chr11	58497888	58505758	58501823	ENSG00000255299.5	-	lincRNA	KNOWN	RP11-655C2.3	3	4	-0.318292
chr11	58507175	58508105	58507640	ENSG00000198283.2	-	protein_coding	KNOWN	OR5B21	1	1	-0.318292
chr11	58526871	58578220	58552545	ENSG00000110031.12	-	protein_coding	KNOWN	LPXN	5	10	0.399330
chr11	58579111	58621042	58600076	ENSG00000186660.14	+	protein_coding	KNOWN	ZFP91	1	11	0.138581
chr11	58579172	58624639	58601905	ENSG00000255073.8	+	protein_coding	KNOWN	ZFP91-CNTF	2	13	0.144835
chr11	58611119	58612642	58611880	ENSG00000269570.2	-	antisense	KNOWN	CMB9-55A18.1	1	1	0.225258
chr11	58622673	58625733	58624203	ENSG00000242689.2	+	protein_coding	KNOWN	CNTF	1	2	0.225258
chr11	58627435	58628528	58627981	ENSG00000280010.1	+	TEC	KNOWN	AP001350.4	1	1	0.225258
chr11	58640426	58731974	58686200	ENSG00000149124.10	-	protein_coding	KNOWN	GLYAT	6	6	-0.016027
chr11	58665801	58665893	58665847	ENSG00000265783.1	+	miRNA	NOVEL	AP000445.3	1	1	0.084687
chr11	58685086	58691861	58688473	ENSG00000197254.4	+	processed_pseudogene	KNOWN	AP000445.1	1	4	0.120226
chr11	58748999	58761053	58755026	ENSG00000254926.1	-	unprocessed_pseudogene	KNOWN	AP000445.2	1	4	-0.292487
chr11	58796237	58796854	58796545	ENSG00000255265.1	-	processed_pseudogene	KNOWN	TMA16P1	1	1	-0.169548
chr11	58834065	58904215	58869140	ENSG00000156689.6	-	protein_coding	KNOWN	GLYATL2	3	7	-0.077438
chr11	58878302	58893460	58885881	ENSG00000254717.2	+	transcribed_unprocessed_pseudogene	KNOWN	GLYATL1P2	2	5	0.009198
chr11	58905398	59043527	58974462	ENSG00000166840.13	+	protein_coding	KNOWN	GLYATL1	19	8	-0.019887
chr11	58917015	58928689	58922852	ENSG00000255523.1	-	antisense	KNOWN	RP11-780O24.2	1	2	0.091992
chr11	58933643	59058659	58996151	ENSG00000255240.5	-	antisense	KNOWN	RP11-142C4.6	3	6	-0.084933
chr11	58967596	58968291	58967943	ENSG00000254877.1	-	processed_pseudogene	KNOWN	RP11-142C4.4	1	1	-0.178778
chr11	58978787	58994120	58986453	ENSG00000255189.1	+	unprocessed_pseudogene	KNOWN	GLYATL1P1	1	4	0.030775
chr11	58995439	58999689	58997564	ENSG00000254786.1	-	unprocessed_pseudogene	KNOWN	RP11-142C4.5	1	4	-0.314222
chr11	59042737	59050971	59046854	ENSG00000254399.2	+	unprocessed_pseudogene	KNOWN	GLYATL1P4	1	5	-0.274265
chr11	59086307	59094786	59090546	ENSG00000255151.2	+	protein_coding	KNOWN	GLYATL1P3	1	5	-0.049207
chr11	59107185	59127410	59117297	ENSG00000189057.10	+	protein_coding	KNOWN	FAM111B	6	4	0.120527
chr11	59130133	59143015	59136574	ENSG00000245571.6	-	lincRNA	KNOWN	AP001258.4	4	5	0.151934
chr11	59142121	59142610	59142365	ENSG00000255381.1	-	processed_pseudogene	KNOWN	AP001258.5	1	1	0.151934
chr11	59142748	59155039	59148893	ENSG00000166801.15	+	protein_coding	KNOWN	FAM111A	11	5	0.219054
chr11	59171430	59208587	59190008	ENSG00000110042.7	+	protein_coding	KNOWN	DTX4	4	9	0.444641
chr11	59208510	59212951	59210730	ENSG00000197629.5	-	protein_coding	KNOWN	MPEG1	1	1	0.614309
chr11	59214406	59214699	59214552	ENSG00000263999.2	-	misc_RNA	KNOWN	RN7SL42P	1	1	0.607380
chr11	59255360	59259486	59257423	ENSG00000225802.3	+	unprocessed_pseudogene	KNOWN	WARSP1	1	3	-0.032763
chr11	59263389	59263802	59263595	ENSG00000254799.1	-	processed_pseudogene	KNOWN	SLC25A47P1	1	1	-0.032763
chr11	59268876	59284033	59276454	ENSG00000214797.3	-	lincRNA	KNOWN	RP11-1036E20.9	1	2	0.499088
chr11	59287339	59289486	59288412	ENSG00000254704.3	-	processed_pseudogene	KNOWN	RP11-1036E20.7	1	1	0.541647
chr11	59291052	59291333	59291192	ENSG00000263944.2	-	misc_RNA	KNOWN	RN7SL435P	1	1	-0.024653
chr11	59309681	59310576	59310128	ENSG00000235678.3	-	unprocessed_pseudogene	KNOWN	OR5AN2P	1	1	-0.033770
chr11	59332757	59334086	59333421	ENSG00000255386.1	-	unprocessed_pseudogene	KNOWN	OR5BR1P	1	1	-0.190408
chr11	59364412	59365448	59364930	ENSG00000176495.2	+	protein_coding	KNOWN	OR5AN1	1	1	-0.002786
chr11	59391354	59392292	59391823	ENSG00000198261.3	-	unprocessed_pseudogene	KNOWN	OR5BB1P	1	1	-0.129136
chr11	59421943	59422976	59422459	ENSG00000172324.4	-	protein_coding	KNOWN	OR5A2	1	1	-0.145047
chr11	59443144	59444194	59443669	ENSG00000172320.2	+	protein_coding	KNOWN	OR5A1	1	1	-0.342411
chr11	59456938	59457991	59457464	ENSG00000166884.2	+	protein_coding	KNOWN	OR4D6	1	1	-0.052398
chr11	59477373	59478396	59477884	ENSG00000254466.1	+	protein_coding	KNOWN	OR4D10	1	1	0.101152
chr11	59491652	59492581	59492116	ENSG00000204989.3	+	unprocessed_pseudogene	KNOWN	OR4D8P	1	1	-0.325371
chr11	59503576	59504511	59504043	ENSG00000176200.1	+	protein_coding	KNOWN	OR4D11	1	1	-0.325371
chr11	59514913	59515857	59515385	ENSG00000172742.4	+	protein_coding	KNOWN	OR4D9	1	1	0.192156
chr11	59531754	59532695	59532224	ENSG00000254770.1	+	unprocessed_pseudogene	KNOWN	OR4D7P	1	1	0.305166
chr11	59561146	59566074	59563610	ENSG00000255008.2	-	lincRNA	KNOWN	AP000442.4	1	6	0.609050
chr11	59574398	59616144	59595271	ENSG00000110048.11	-	protein_coding	KNOWN	OSBP	3	14	0.405356
chr11	59595077	59595158	59595117	ENSG00000264559.1	-	miRNA	KNOWN	MIR3162	1	1	0.313316
chr11	59616429	59639861	59628145	ENSG00000255139.1	+	antisense	KNOWN	AP000442.1	2	4	0.422351
chr11	59636716	59668980	59652848	ENSG00000166889.13	-	protein_coding	KNOWN	PATL1	2	19	0.519999
chr11	59669312	59676041	59672676	ENSG00000255355.1	+	processed_transcript	KNOWN	AP000640.2	2	2	0.053451
chr11	59706057	59706383	59706220	ENSG00000223223.1	-	misc_RNA	KNOWN	RN7SKP192	1	1	0.210387
chr11	59712823	59713864	59713343	ENSG00000172289.2	-	protein_coding	KNOWN	OR10V1	1	1	-0.095432
chr11	59713456	59805882	59759669	ENSG00000166900.14	+	protein_coding	KNOWN	STX3	8	12	0.185781
chr11	59728519	59729492	59729005	ENSG00000254403.1	+	unprocessed_pseudogene	KNOWN	OR10Y1P	1	1	-0.095432
chr11	59741325	59742049	59741687	ENSG00000254743.1	+	unprocessed_pseudogene	KNOWN	OR10V3P	1	1	-0.056531
chr11	59748811	59749574	59749192	ENSG00000255538.1	+	unprocessed_pseudogene	KNOWN	OR10V2P	1	1	-0.056531
chr11	59753015	59754975	59753995	ENSG00000254477.1	-	antisense	KNOWN	AP000640.10	1	2	0.692384
chr11	59781318	59781722	59781520	ENSG00000234964.4	-	processed_pseudogene	KNOWN	FABP5P7	1	1	0.273512
chr11	59806135	59810872	59808503	ENSG00000166902.4	-	protein_coding	KNOWN	MRPL16	4	4	0.075968
chr11	59829268	59845501	59837384	ENSG00000134812.7	-	protein_coding	KNOWN	GIF	5	9	-0.165682
chr11	59852800	59866575	59859687	ENSG00000134827.7	-	protein_coding	KNOWN	TCN1	5	9	0.067045
chr11	59898185	59899133	59898659	ENSG00000270929.1	+	processed_pseudogene	KNOWN	SRD5A3P1	1	1	-0.135814
chr11	59938455	59995845	59967150	ENSG00000214788.2	+	unitary_pseudogene	KNOWN	OOSP1	1	10	-0.262860
chr11	60024908	60031077	60027992	ENSG00000255393.1	+	lincRNA	KNOWN	RP11-736I10.1	1	3	-0.279520
chr11	60040275	60048044	60044159	ENSG00000149507.6	+	protein_coding	KNOWN	OOSP2	3	4	-0.096865
chr11	60056587	60071128	60063857	ENSG00000149516.13	+	protein_coding	KNOWN	MS4A3	8	7	0.170817
chr11	60077350	60078401	60077875	ENSG00000255331.1	+	processed_pseudogene	KNOWN	RP11-736I10.2	1	2	-0.186868
chr11	60088261	60098466	60093363	ENSG00000149534.8	+	protein_coding	KNOWN	MS4A2	4	7	-0.119320
chr11	60159687	60160822	60160254	ENSG00000254952.1	-	lincRNA	KNOWN	AP001257.1	1	3	-0.601169
chr11	60172014	60184666	60178340	ENSG00000110077.14	-	protein_coding	KNOWN	MS4A6A	21	8	0.050887
chr11	60201253	60243088	60222170	ENSG00000214787.8	-	protein_coding	KNOWN	MS4A4E	7	6	-0.302933
chr11	60209071	60209156	60209113	ENSG00000275344.1	-	miRNA	KNOWN	MIR6503	1	1	-0.347430
chr11	60280541	60308972	60294756	ENSG00000110079.16	+	protein_coding	KNOWN	MS4A4A	6	8	-0.138823
chr11	60334831	60396596	60365713	ENSG00000166926.8	+	protein_coding	KNOWN	MS4A6E	3	5	0.013733
chr11	60378482	60395951	60387216	ENSG00000166927.12	+	protein_coding	KNOWN	MS4A7	12	7	0.023623
chr11	60378530	60417756	60398143	ENSG00000166928.10	+	protein_coding	KNOWN	MS4A14	11	6	-0.052765
chr11	60429589	60455214	60442401	ENSG00000166930.6	+	protein_coding	KNOWN	MS4A5	6	5	-0.020490
chr11	60455752	60470760	60463256	ENSG00000156738.17	+	protein_coding	KNOWN	MS4A1	12	7	-0.053622
chr11	60492778	60507430	60500104	ENSG00000071203.9	+	protein_coding	KNOWN	MS4A12	5	7	0.055696
chr11	60515413	60542721	60529067	ENSG00000204979.7	+	protein_coding	KNOWN	MS4A13	4	7	-0.145376
chr11	60615736	60687149	60651442	ENSG00000181995.11	+	lincRNA	KNOWN	LINC00301	4	7	-0.074245
chr11	60699574	60715811	60707692	ENSG00000166959.7	+	protein_coding	KNOWN	MS4A8	9	7	0.146290
chr11	60729304	60744212	60736758	ENSG00000214782.7	+	protein_coding	KNOWN	MS4A18	2	6	0.205414
chr11	60756953	60776732	60766842	ENSG00000166961.14	+	protein_coding	KNOWN	MS4A15	4	8	0.384134
chr11	60785348	60801305	60793326	ENSG00000172689.1	+	protein_coding	KNOWN	MS4A10	1	8	0.432426
chr11	60813932	60821739	60817835	ENSG00000255845.1	-	antisense	KNOWN	RP11-804A23.1	1	3	0.283687
chr11	60835996	60842965	60839480	ENSG00000255959.1	-	antisense	KNOWN	RP11-804A23.2	1	2	0.739513
chr11	60841806	60851081	60846443	ENSG00000256813.1	-	antisense	KNOWN	RP11-804A23.4	1	2	0.746645
chr11	60842071	60851081	60846576	ENSG00000110104.11	+	protein_coding	KNOWN	CCDC86	3	5	0.746855
chr11	60850940	60855971	60853455	ENSG00000183134.4	-	protein_coding	KNOWN	PTGDR2	1	2	0.800652
chr11	60867562	60875693	60871627	ENSG00000149506.10	+	protein_coding	KNOWN	ZP1	6	12	0.807693
chr11	60890730	60906588	60898659	ENSG00000110107.8	-	protein_coding	KNOWN	PRPF19	7	16	0.362846
chr11	60906789	60909742	60908265	ENSG00000257052.1	+	antisense	KNOWN	RP11-881M11.2	1	2	0.362846
chr11	60913166	60914052	60913609	ENSG00000256944.1	-	antisense	KNOWN	RP11-881M11.1	1	2	0.484635
chr11	60913874	60923443	60918658	ENSG00000110108.9	+	protein_coding	KNOWN	TMEM109	3	4	0.484635
chr11	60918469	60925397	60921933	ENSG00000256196.1	-	antisense	KNOWN	RP11-881M11.4	1	2	0.484635
chr11	60924463	60937159	60930811	ENSG00000006118.14	+	protein_coding	KNOWN	TMEM132A	14	11	0.787218
chr11	60937083	60952530	60944806	ENSG00000110446.9	-	protein_coding	KNOWN	SLC15A3	11	9	0.985928
chr11	60971680	61020377	60996028	ENSG00000013725.14	+	protein_coding	KNOWN	CD6	14	13	0.440326
chr11	60985061	60985167	60985114	ENSG00000207153.1	-	snRNA	KNOWN	RNU6-933P	1	1	0.550691
chr11	61055737	61067535	61061636	ENSG00000256733.1	+	lincRNA	KNOWN	RP11-881M11.8	1	4	0.382211
chr11	61102395	61127852	61115123	ENSG00000110448.10	+	protein_coding	KNOWN	CD5	2	11	0.581878
chr11	61130256	61161617	61145936	ENSG00000167987.10	-	protein_coding	KNOWN	VPS37C	4	5	0.738055
chr11	61143380	61145464	61144422	ENSG00000279549.1	-	TEC	KNOWN	AP000437.3	1	1	0.843555
chr11	61203307	61213098	61208202	ENSG00000229859.8	+	protein_coding	KNOWN	PGA3	9	9	0.417591
chr11	61222216	61231927	61227071	ENSG00000229183.8	+	protein_coding	KNOWN	PGA4	8	9	0.475327
chr11	61227168	61248533	61237850	ENSG00000256220.1	+	processed_transcript	KNOWN	CTD-2331C18.5	1	2	0.456586
chr11	61241042	61251448	61246245	ENSG00000256713.7	+	protein_coding	KNOWN	PGA5	6	9	0.502500
chr11	61258286	61295424	61276855	ENSG00000167992.12	-	protein_coding	KNOWN	VWCE	8	22	0.955314
chr11	61299451	61342596	61321023	ENSG00000167986.13	-	protein_coding	KNOWN	DDB1	25	29	0.976310
chr11	61333210	61353295	61343252	ENSG00000149476.14	+	protein_coding	KNOWN	TKFC	22	18	1.050578
chr11	61348745	61362299	61355522	ENSG00000162144.9	-	protein_coding	KNOWN	CYB561A3	21	8	0.901760
chr11	61352244	61354477	61353360	ENSG00000279246.1	+	TEC	KNOWN	RP11-286N22.14	1	1	0.883239
chr11	61362001	61369509	61365755	ENSG00000149483.11	+	protein_coding	KNOWN	TMEM138	12	5	0.883239
chr11	61391687	61398863	61395275	ENSG00000187049.9	+	protein_coding	KNOWN	TMEM216	5	5	1.081650
chr11	61402641	61430031	61416336	ENSG00000149532.15	-	protein_coding	KNOWN	CPSF7	26	10	0.739862
chr11	61426448	61427325	61426886	ENSG00000279632.1	-	TEC	KNOWN	RP11-286N22.6	1	1	0.614219
chr11	61429220	61485822	61457521	ENSG00000256591.5	+	protein_coding	KNOWN	RP11-286N22.8	8	7	0.701854
chr11	61430042	61447529	61438785	ENSG00000167985.6	+	protein_coding	KNOWN	SDHAF2	8	5	0.676954
chr11	61444149	61444423	61444286	ENSG00000240823.3	+	misc_RNA	KNOWN	RN7SL23P	1	1	0.676954
chr11	61481120	61490931	61486025	ENSG00000162148.10	+	protein_coding	KNOWN	PPP1R32	6	14	0.902226
chr11	61496440	61500076	61498258	ENSG00000255931.1	+	lincRNA	KNOWN	RP11-286N22.10	1	2	0.917158
chr11	61508596	61508657	61508626	ENSG00000266006.1	+	miRNA	KNOWN	MIR4488	1	1	0.917158
chr11	61508800	61511018	61509909	ENSG00000204950.3	+	protein_coding	KNOWN	LRRC10B	1	1	0.942639
chr11	61515313	61581148	61548230	ENSG00000011347.9	-	protein_coding	KNOWN	SYT7	10	14	1.076998
chr11	61525708	61526602	61526155	ENSG00000279878.1	-	TEC	KNOWN	RP11-286N22.16	1	1	0.972620
chr11	61539516	61542259	61540887	ENSG00000256443.1	-	lincRNA	KNOWN	RP11-794G24.1	1	2	1.184558
chr11	61588494	61607550	61598022	ENSG00000250230.2	+	lincRNA	KNOWN	RP11-855O10.2	1	4	0.779857
chr11	61615036	61639449	61627242	ENSG00000243742.5	+	transcribed_processed_pseudogene	KNOWN	RPLP0P2	6	5	0.699066
chr11	61654665	61655702	61655183	ENSG00000255947.1	-	lincRNA	KNOWN	RP11-855O10.3	1	2	0.787658
chr11	61680433	61747001	61713717	ENSG00000134780.9	+	protein_coding	KNOWN	DAGLA	2	20	0.995565
chr11	61746493	61757655	61752074	ENSG00000124915.10	-	lincRNA	KNOWN	DKFZP434K028	3	6	1.098524
chr11	61752642	61788518	61770580	ENSG00000124920.13	+	protein_coding	KNOWN	MYRF	8	27	1.230217
chr11	61768501	61792802	61780651	ENSG00000134825.13	-	protein_coding	KNOWN	TMEM258	8	5	1.293144
chr11	61792495	61792561	61792528	ENSG00000207601.1	-	miRNA	KNOWN	MIR611	1	1	0.951031
chr11	61792637	61797244	61794940	ENSG00000168496.3	+	protein_coding	KNOWN	FEN1	3	2	0.951031
chr11	61792980	61867354	61830167	ENSG00000134824.13	+	protein_coding	KNOWN	FADS2	15	12	0.988657
chr11	61799625	61829318	61814471	ENSG00000149485.16	-	protein_coding	KNOWN	FADS1	21	12	0.899304
chr11	61815161	61815240	61815200	ENSG00000222326.1	-	miRNA	KNOWN	MIR1908	1	1	0.871527
chr11	61873519	61892051	61882785	ENSG00000221968.8	-	protein_coding	KNOWN	FADS3	13	12	1.440004
chr11	61878216	61878278	61878247	ENSG00000277892.1	-	miRNA	KNOWN	MIR6746	1	1	1.464410
chr11	61897301	61920269	61908785	ENSG00000167994.11	-	protein_coding	KNOWN	RAB3IL1	6	10	1.254259
chr11	61937894	61938000	61937947	ENSG00000200898.1	+	snRNA	KNOWN	RNU6-1243P	1	1	0.674037
chr11	61949821	61965515	61957668	ENSG00000167995.15	+	protein_coding	KNOWN	BEST1	8	11	0.802713
chr11	61959718	61967660	61963689	ENSG00000167996.15	-	protein_coding	KNOWN	FTH1	12	5	0.804189
chr11	61967794	61969490	61968642	ENSG00000279491.1	+	TEC	KNOWN	RP11-810P12.7	1	1	0.804189
chr11	61974378	61974632	61974505	ENSG00000280642.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.003765
chr11	62011751	62012602	62012176	ENSG00000244176.1	-	processed_pseudogene	KNOWN	RP11-810P12.1	1	1	0.995929
chr11	62072882	62073052	62072967	ENSG00000254424.1	-	processed_pseudogene	KNOWN	RP11-810P12.6	1	1	0.893011
chr11	62077277	62082184	62079730	ENSG00000255553.1	-	lincRNA	KNOWN	RP11-810P12.5	1	2	0.893011
chr11	62123973	62153163	62138568	ENSG00000149503.12	+	protein_coding	KNOWN	INCENP	6	19	0.964298
chr11	62169293	62169828	62169560	ENSG00000236607.3	+	processed_pseudogene	KNOWN	EEF1DP8	1	1	0.819371
chr11	62190216	62193539	62191877	ENSG00000168515.3	+	protein_coding	KNOWN	SCGB1D1	1	3	0.372100
chr11	62208668	62213939	62211303	ENSG00000124939.5	+	protein_coding	KNOWN	SCGB2A1	1	3	0.254340
chr11	62213427	62260549	62236988	ENSG00000254404.1	-	antisense	KNOWN	RP11-703H8.9	1	3	0.091382
chr11	62242210	62244808	62243509	ENSG00000124935.3	+	protein_coding	KNOWN	SCGB1D2	1	3	-0.229936
chr11	62270155	62273156	62271655	ENSG00000110484.6	+	protein_coding	KNOWN	SCGB2A2	2	3	-0.077933
chr11	62296277	62299064	62297670	ENSG00000197745.2	-	protein_coding	KNOWN	SCGB1D4	1	3	0.261917
chr11	62330946	62331813	62331379	ENSG00000255213.1	+	processed_pseudogene	KNOWN	NPM1P35	1	1	0.544199
chr11	62336911	62338090	62337500	ENSG00000255118.1	-	antisense	KNOWN	RP11-703H8.7	1	2	0.544199
chr11	62337448	62393412	62365430	ENSG00000162174.12	+	protein_coding	KNOWN	ASRGL1	11	7	0.395302
chr11	62371146	62373168	62372157	ENSG00000254454.2	+	processed_pseudogene	KNOWN	RCC2P6	1	3	0.296682
chr11	62372656	62372719	62372687	ENSG00000265696.1	+	miRNA	NOVEL	AP003064.2	1	1	0.296682
chr11	62391516	62393372	62392444	ENSG00000255126.1	-	antisense	KNOWN	CTD-2531D15.5	1	2	0.892851
chr11	62405103	62423195	62414149	ENSG00000149021.6	+	protein_coding	KNOWN	SCGB1A1	2	4	0.875417
chr11	62421845	62426724	62424284	ENSG00000255446.1	-	antisense	KNOWN	CTD-2531D15.4	1	2	0.868949
chr11	62433542	62556235	62494888	ENSG00000124942.13	-	protein_coding	KNOWN	AHNAK	8	6	0.792021
chr11	62463635	62463724	62463679	ENSG00000238861.1	+	miRNA	NOVEL	AP003064.1	1	1	0.943778
chr11	62537312	62542018	62539665	ENSG00000250659.2	+	antisense	KNOWN	RP11-864I4.3	1	2	0.811405
chr11	62545999	62547699	62546849	ENSG00000257058.1	+	antisense	KNOWN	RP11-864I4.4	1	2	0.811405
chr11	62559601	62574086	62566843	ENSG00000254772.9	-	protein_coding	KNOWN	EEF1G	4	10	1.214811
chr11	62559603	62591531	62575567	ENSG00000255508.7	-	protein_coding	KNOWN	RP11-864I4.1	3	17	1.114090
chr11	62567011	62567071	62567041	ENSG00000276102.1	-	miRNA	KNOWN	MIR6747	1	1	1.284090
chr11	62575045	62592177	62583611	ENSG00000149016.15	-	protein_coding	KNOWN	TUT1	7	9	1.026865
chr11	62593214	62601840	62597527	ENSG00000149480.6	-	protein_coding	KNOWN	MTA2	7	18	0.946618
chr11	62602218	62612765	62607491	ENSG00000149499.11	-	protein_coding	KNOWN	EML3	18	22	1.078872
chr11	62606161	62606405	62606283	ENSG00000254964.1	+	antisense	KNOWN	RP11-831H9.3	1	2	0.946618
chr11	62611722	62615120	62613421	ENSG00000149489.8	+	protein_coding	KNOWN	ROM1	5	3	1.450914
chr11	62615296	62622175	62618735	ENSG00000149541.9	-	protein_coding	KNOWN	B3GAT3	6	6	1.450914
chr11	62624826	62646726	62635776	ENSG00000089597.16	-	protein_coding	KNOWN	GANAB	16	25	1.281193
chr11	62646848	62653302	62650075	ENSG00000185085.2	-	protein_coding	KNOWN	INTS5	1	2	1.060730
chr11	62649694	62665178	62657436	ENSG00000255432.1	-	protein_coding	KNOWN	RP11-831H9.11	1	4	0.906950
chr11	62662816	62665217	62664016	ENSG00000278615.4	-	protein_coding	KNOWN	C11orf98	3	4	0.900485
chr11	62662817	62672255	62667536	ENSG00000162194.12	-	protein_coding	KNOWN	LBHD1	10	7	0.896447
chr11	62665309	62668496	62666902	ENSG00000214756.7	+	protein_coding	KNOWN	METTL12	4	3	0.900485
chr11	62665422	62665570	62665496	ENSG00000206597.1	+	snoRNA	KNOWN	SNORA57	1	1	0.900485
chr11	62670273	62673687	62671980	ENSG00000204922.4	+	protein_coding	KNOWN	UQCC3	2	3	0.883593
chr11	62676498	62679117	62677807	ENSG00000162191.13	-	protein_coding	KNOWN	UBXN1	18	10	0.883593
chr11	62686402	62689899	62688150	ENSG00000177363.4	-	protein_coding	KNOWN	LRRN4CL	1	2	0.883593
chr11	62690275	62727384	62708829	ENSG00000234857.2	-	protein_coding	KNOWN	HNRNPUL2-BSCL2	1	24	1.094943
chr11	62690275	62709845	62700060	ENSG00000168000.14	-	protein_coding	KNOWN	BSCL2	27	12	1.161033
chr11	62707658	62709201	62708429	ENSG00000162188.5	+	protein_coding	KNOWN	GNG3	1	3	1.161033
chr11	62712630	62727349	62719989	ENSG00000214753.2	-	protein_coding	KNOWN	HNRNPUL2	2	14	1.019962
chr11	62728069	62740293	62734181	ENSG00000162222.13	+	protein_coding	KNOWN	TTC9C	6	4	0.811927
chr11	62748319	62754188	62751253	ENSG00000185670.7	-	protein_coding	KNOWN	ZBTB3	3	2	0.762105
chr11	62761544	62766710	62764127	ENSG00000168002.11	+	protein_coding	KNOWN	POLR2G	8	8	0.757766
chr11	62771120	62771606	62771363	ENSG00000267811.1	-	antisense	KNOWN	RP11-727F15.11	1	1	0.863460
chr11	62771303	62787342	62779322	ENSG00000162227.7	+	protein_coding	KNOWN	TAF6L	8	11	0.863460
chr11	62771629	62792021	62781825	ENSG00000168569.7	-	protein_coding	KNOWN	TMEM223	4	4	0.905648
chr11	62786023	62786785	62786404	ENSG00000269176.2	-	antisense	KNOWN	RP11-727F15.12	1	1	0.863460
chr11	62787415	62790405	62788910	ENSG00000185475.8	+	protein_coding	KNOWN	TMEM179B	5	5	0.921232
chr11	62789815	62789885	62789850	ENSG00000274856.1	+	miRNA	KNOWN	MIR6748	1	1	0.863460
chr11	62792123	62806302	62799212	ENSG00000162231.13	-	protein_coding	KNOWN	NXF1	17	22	1.288924
chr11	62792702	62792771	62792736	ENSG00000274066.1	-	miRNA	KNOWN	MIR6514	1	1	1.288924
chr11	62806897	62832088	62819492	ENSG00000162236.11	-	protein_coding	KNOWN	STX5	8	11	1.000214
chr11	62807682	62808063	62807872	ENSG00000269463.1	-	sense_intronic	KNOWN	RP11-727F15.13	1	1	1.288924
chr11	62815966	62816067	62816016	ENSG00000252361.1	-	snRNA	KNOWN	RNU6-118P	1	1	0.960126
chr11	62832234	62834043	62833138	ENSG00000256690.1	+	antisense	KNOWN	RP11-727F15.9	2	2	0.955303
chr11	62832342	62841809	62837075	ENSG00000133316.15	-	protein_coding	KNOWN	WDR74	17	12	0.955303
chr11	62841619	62841809	62841714	ENSG00000222328.1	-	snRNA	KNOWN	RNU2-2P	1	1	0.955303
chr11	62851988	62855914	62853951	ENSG00000255717.6	-	processed_transcript	KNOWN	SNHG1	25	11	0.807486
chr11	62852910	62853035	62852972	ENSG00000277194.1	-	snoRNA	KNOWN	SNORD22	1	1	0.807486
chr11	62853663	62853732	62853697	ENSG00000277846.1	-	snoRNA	KNOWN	SNORD30	1	1	0.807486
chr11	62854161	62854285	62854223	ENSG00000278527.1	-	snoRNA	NOVEL	SNORD22	1	1	0.807486
chr11	62854621	62854695	62854658	ENSG00000274544.1	-	snoRNA	KNOWN	SNORD28	1	1	0.807486
chr11	62855012	62855083	62855047	ENSG00000275996.1	-	snoRNA	KNOWN	SNORD27	1	1	0.807486
chr11	62855292	62855366	62855329	ENSG00000276788.1	-	snoRNA	KNOWN	SNORD26	1	1	0.807486
chr11	62855564	62855632	62855598	ENSG00000275043.1	-	snoRNA	KNOWN	SNORD25	1	1	0.807486
chr11	62856102	62888875	62872488	ENSG00000168003.16	+	protein_coding	KNOWN	SLC3A2	23	12	0.817773
chr11	62908679	62921807	62915243	ENSG00000168539.3	-	protein_coding	KNOWN	CHRM1	3	3	0.614716
chr11	62909546	62918361	62913953	ENSG00000257002.1	+	antisense	KNOWN	AP000438.2	1	3	0.577401
chr11	62935982	62936234	62936108	ENSG00000241082.3	-	misc_RNA	KNOWN	RN7SL259P	1	1	0.693442
chr11	62936385	62984983	62960684	ENSG00000197901.11	-	protein_coding	KNOWN	SLC22A6	6	10	0.411789
chr11	62989154	63015839	63002496	ENSG00000149452.15	-	protein_coding	KNOWN	SLC22A8	10	11	0.538146
chr11	63032503	63033103	63032803	ENSG00000256041.1	-	processed_pseudogene	KNOWN	RP11-959F10.4	1	1	0.157415
chr11	63046785	63048126	63047455	ENSG00000253547.2	+	processed_pseudogene	KNOWN	RP11-959F10.5	1	1	0.157415
chr11	63079940	63144221	63112080	ENSG00000197658.9	-	protein_coding	KNOWN	SLC22A24	3	10	0.069846
chr11	63115880	63116338	63116109	ENSG00000239924.1	-	processed_pseudogene	KNOWN	RPL29P22	1	1	0.003058
chr11	63137867	63369718	63253792	ENSG00000184999.11	+	protein_coding	KNOWN	SLC22A10	6	11	-0.089725
chr11	63163776	63229652	63196714	ENSG00000196600.12	-	protein_coding	KNOWN	SLC22A25	4	11	-0.031251
chr11	63237957	63239114	63238535	ENSG00000256863.1	-	unprocessed_pseudogene	KNOWN	RP11-959F10.6	1	2	-0.397393
chr11	63243085	63244004	63243544	ENSG00000256847.1	+	processed_pseudogene	KNOWN	CCND2P1	1	2	-0.397393
chr11	63265836	63266256	63266046	ENSG00000256181.1	-	unprocessed_pseudogene	KNOWN	AP000438.4	1	1	-0.000520
chr11	63369789	63410294	63390041	ENSG00000149742.9	+	protein_coding	KNOWN	SLC22A9	2	10	-0.093254
chr11	63461404	63491194	63476299	ENSG00000168004.9	-	protein_coding	KNOWN	HRASLS5	6	6	0.092517
chr11	63469376	63470944	63470160	ENSG00000275598.1	+	processed_pseudogene	KNOWN	CMB9-14B22.1	1	2	0.045062
chr11	63506084	63516774	63511429	ENSG00000133317.14	+	protein_coding	KNOWN	LGALS12	5	9	0.526128
chr11	63536809	63546462	63541635	ENSG00000133321.10	+	protein_coding	KNOWN	RARRES3	5	4	0.391552
chr11	63552770	63563383	63558076	ENSG00000133328.3	-	protein_coding	KNOWN	HRASLS2	1	4	0.281816
chr11	63573195	63616883	63595039	ENSG00000176485.10	-	protein_coding	KNOWN	PLA2G16	5	5	0.477486
chr11	63616308	63621671	63618989	ENSG00000203520.3	+	antisense	KNOWN	RP11-697H9.3	1	2	0.808199
chr11	63624087	63671921	63648004	ENSG00000184743.12	-	protein_coding	KNOWN	ATL3	4	13	0.375325
chr11	63632233	63632720	63632476	ENSG00000270269.1	+	processed_pseudogene	KNOWN	IMMP1LP1	1	1	0.417662
chr11	63637677	63658962	63648319	ENSG00000256789.1	+	antisense	KNOWN	RP11-697H9.2	1	3	0.311334
chr11	63681446	63759891	63720668	ENSG00000133318.13	+	protein_coding	KNOWN	RTN3	14	9	0.645513
chr11	63698596	63698764	63698680	ENSG00000271100.1	-	processed_pseudogene	KNOWN	RP11-697H9.5	1	1	0.713480
chr11	63759892	63768775	63764333	ENSG00000188070.9	-	protein_coding	KNOWN	C11orf95	4	5	0.287543
chr11	63797784	63798071	63797927	ENSG00000264519.2	-	misc_RNA	KNOWN	RN7SL596P	1	1	0.633886
chr11	63813388	63827718	63820553	ENSG00000168005.8	+	protein_coding	KNOWN	C11orf84	3	6	0.627246
chr11	63834667	63834943	63834805	ENSG00000256280.1	-	processed_pseudogene	KNOWN	RP11-466C23.5	1	1	1.142943
chr11	63838928	63911019	63874973	ENSG00000072518.20	+	protein_coding	KNOWN	MARK2	15	19	0.986105
chr11	63882587	63882685	63882636	ENSG00000202089.1	-	snRNA	KNOWN	RNU6-1306P	1	1	0.883213
chr11	63911221	63916844	63914032	ENSG00000167771.5	-	protein_coding	KNOWN	RCOR2	3	12	1.359764
chr11	63938959	63957328	63948143	ENSG00000110583.12	+	protein_coding	KNOWN	NAA40	10	8	0.978542
chr11	63970470	63970576	63970523	ENSG00000207200.1	+	snRNA	KNOWN	RNU6-45P	1	1	0.960126
chr11	63974607	63976543	63975575	ENSG00000176340.3	+	protein_coding	KNOWN	COX8A	1	2	0.960126
chr11	63974620	63988346	63981483	ENSG00000256100.1	+	protein_coding	KNOWN	AP000721.4	1	3	0.960126
chr11	63978006	63978080	63978043	ENSG00000278375.1	+	miRNA	NOVEL	AP000721.1	1	1	0.960126
chr11	63985853	64001811	63993832	ENSG00000167770.11	+	protein_coding	KNOWN	OTUB1	12	10	1.068574
chr11	63998558	64166106	64082332	ENSG00000133315.10	-	protein_coding	KNOWN	MACROD1	8	11	1.138306
chr11	64035970	64103653	64069811	ENSG00000256824.1	+	antisense	KNOWN	RP11-21A7A.2	2	2	1.221299
chr11	64081690	64087175	64084432	ENSG00000256481.1	+	antisense	KNOWN	RP11-21A7A.4	1	3	1.220507
chr11	64103188	64119173	64111180	ENSG00000126500.3	+	protein_coding	KNOWN	FLRT1	1	2	0.997874
chr11	64118272	64119210	64118741	ENSG00000256341.1	-	antisense	KNOWN	RP11-21A7A.3	1	2	0.852804
chr11	64185272	64204543	64194907	ENSG00000168439.16	+	protein_coding	KNOWN	STIP1	12	14	1.113438
chr11	64206678	64223886	64215282	ENSG00000149781.12	+	protein_coding	KNOWN	FERMT3	9	15	1.191242
chr11	64223799	64226254	64225026	ENSG00000149743.13	-	protein_coding	KNOWN	TRPT1	16	8	1.206762
chr11	64225941	64230686	64228313	ENSG00000149761.8	+	protein_coding	KNOWN	NUDT22	12	6	1.239450
chr11	64229214	64234352	64231783	ENSG00000256116.1	-	antisense	KNOWN	RP11-783K16.14	2	2	1.398042
chr11	64230278	64234286	64232282	ENSG00000110011.13	+	protein_coding	KNOWN	DNAJC4	12	7	1.432536
chr11	64234538	64238793	64236665	ENSG00000173511.9	+	protein_coding	KNOWN	VEGFB	4	7	1.432536
chr11	64241003	64244132	64242567	ENSG00000173486.12	+	protein_coding	KNOWN	FKBP2	6	6	1.432536
chr11	64244480	64246941	64245710	ENSG00000173457.10	-	protein_coding	KNOWN	PPP1R14B	3	4	1.432536
chr11	64245964	64248217	64247090	ENSG00000256940.1	+	antisense	KNOWN	RP11-783K16.5	2	2	1.432536
chr11	64246939	64249494	64248216	ENSG00000257086.1	-	lincRNA	KNOWN	RP11-783K16.13	1	4	1.432536
chr11	64251523	64269150	64260336	ENSG00000149782.11	+	protein_coding	KNOWN	PLCB3	4	32	1.689893
chr11	64269830	64284704	64277267	ENSG00000002330.13	-	protein_coding	KNOWN	BAD	7	5	1.564068
chr11	64270062	64289500	64279781	ENSG00000173264.13	+	protein_coding	KNOWN	GPR137	20	9	1.562622
chr11	64291302	64300031	64295666	ENSG00000182450.12	+	protein_coding	KNOWN	KCNK4	10	7	1.269232
chr11	64291722	64304769	64298245	ENSG00000257069.5	+	processed_transcript	KNOWN	RP11-783K16.10	2	11	1.269232
chr11	64296037	64296138	64296087	ENSG00000207024.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.269232
chr11	64300446	64304770	64302608	ENSG00000219435.4	+	protein_coding	KNOWN	TEX40	2	4	1.269232
chr11	64305572	64316743	64311157	ENSG00000173153.13	+	protein_coding	KNOWN	ESRRA	7	7	1.268578
chr11	64313860	64313950	64313905	ENSG00000278148.1	+	miRNA	NOVEL	AP001453.1	1	1	1.268149
chr11	64316460	64318084	64317272	ENSG00000173113.6	-	protein_coding	KNOWN	TRMT112	6	4	1.268149
chr11	64318088	64321811	64319949	ENSG00000126432.13	+	protein_coding	KNOWN	PRDX5	3	6	1.268149
chr11	64325050	64329504	64327277	ENSG00000236935.1	-	antisense	KNOWN	AP003774.1	1	3	1.268149
chr11	64340223	64357534	64348878	ENSG00000168071.21	+	protein_coding	KNOWN	CCDC88B	10	27	1.232996
chr11	64341849	64341904	64341876	ENSG00000278359.1	-	miRNA	KNOWN	MIR7155	1	1	1.123601
chr11	64359148	64372215	64365681	ENSG00000162302.12	+	protein_coding	KNOWN	RPS6KA4	8	17	1.359034
chr11	64368602	64368703	64368652	ENSG00000221273.1	+	miRNA	KNOWN	MIR1237	1	1	1.374926
chr11	64394342	64395831	64395086	ENSG00000231680.1	-	lincRNA	KNOWN	AP003774.6	1	2	0.885541
chr11	64420391	64432670	64426530	ENSG00000231492.2	+	lincRNA	KNOWN	AP003774.5	2	4	0.636486
chr11	64449074	64451657	64450365	ENSG00000181908.5	+	lincRNA	KNOWN	AP003774.4	1	2	0.678385
chr11	64500853	64505386	64503119	ENSG00000232500.1	+	lincRNA	KNOWN	AP005273.1	1	3	0.213412
chr11	64531044	64532970	64532007	ENSG00000237363.1	+	unprocessed_pseudogene	KNOWN	AP006288.1	1	3	1.015371
chr11	64555626	64572875	64564250	ENSG00000168065.15	+	protein_coding	KNOWN	SLC22A11	8	10	0.765231
chr11	64590641	64602353	64596497	ENSG00000197891.11	+	protein_coding	KNOWN	SLC22A12	5	10	1.070362
chr11	64606174	64723188	64664681	ENSG00000110076.18	-	protein_coding	KNOWN	NRXN2	16	23	0.958408
chr11	64646399	64659681	64653040	ENSG00000237410.1	+	antisense	KNOWN	AP001092.4	1	2	0.982969
chr11	64726911	64745456	64736183	ENSG00000068831.18	-	protein_coding	KNOWN	RASGRP2	23	17	1.149811
chr11	64746389	64760297	64753343	ENSG00000068976.13	-	protein_coding	KNOWN	PYGM	5	20	1.079857
chr11	64764606	64778786	64771696	ENSG00000168066.20	-	protein_coding	KNOWN	SF1	21	14	0.959940
chr11	64778954	64779405	64779179	ENSG00000269038.1	+	lincRNA	KNOWN	AP001462.6	1	1	0.915466
chr11	64784914	64803241	64794077	ENSG00000168067.11	-	protein_coding	KNOWN	MAP4K2	13	32	0.964363
chr11	64803510	64811294	64807402	ENSG00000133895.14	-	protein_coding	KNOWN	MEN1	16	11	1.027825
chr11	64823387	64844569	64833978	ENSG00000171219.8	-	protein_coding	KNOWN	CDC42BPG	4	37	1.262034
chr11	64851642	64888296	64869969	ENSG00000110047.17	-	protein_coding	KNOWN	EHD1	13	7	1.146739
chr11	64881535	64881945	64881740	ENSG00000230835.1	+	processed_pseudogene	KNOWN	AP001187.11	1	1	1.035111
chr11	64889560	64893449	64891504	ENSG00000229719.3	-	lincRNA	KNOWN	MIR194-2HG	1	2	1.288669
chr11	64891132	64891243	64891187	ENSG00000207648.2	-	miRNA	KNOWN	MIR192	1	1	1.320933
chr11	64891355	64891439	64891397	ENSG00000277225.1	-	miRNA	KNOWN	MIR194-2	1	1	1.320933
chr11	64894546	64917248	64905897	ENSG00000110046.12	-	protein_coding	KNOWN	ATG2A	6	41	1.261582
chr11	64898363	64898437	64898400	ENSG00000274986.1	-	miRNA	KNOWN	MIR6750	1	1	1.320933
chr11	64902387	64902455	64902421	ENSG00000274314.1	-	miRNA	KNOWN	MIR6749	1	1	1.320933
chr11	64917553	64934473	64926013	ENSG00000068971.13	+	protein_coding	KNOWN	PPP2R5B	5	14	1.220657
chr11	64926418	64926519	64926468	ENSG00000281443.1	+	miRNA	NOVEL	AP001187.1	1	1	1.135061
chr11	64934471	64935888	64935179	ENSG00000149735.6	-	protein_coding	KNOWN	GPHA2	3	4	1.458774
chr11	64937517	64972085	64954801	ENSG00000168070.11	-	protein_coding	KNOWN	C11orf85	6	12	1.024823
chr11	64987943	64997045	64992494	ENSG00000168062.9	-	protein_coding	KNOWN	BATF2	5	3	0.855405
chr11	65014113	65022184	65018148	ENSG00000213465.7	+	protein_coding	KNOWN	ARL2	6	6	1.032753
chr11	65014182	65040570	65027376	ENSG00000273003.1	+	protein_coding	KNOWN	ARL2-SNX15	1	11	1.099580
chr11	65018505	65018570	65018537	ENSG00000278851.1	+	miRNA	KNOWN	MIR6879	1	1	1.032753
chr11	65025390	65026515	65025952	ENSG00000270775.1	-	processed_pseudogene	KNOWN	AP000436.4	1	2	1.032753
chr11	65027408	65040572	65033990	ENSG00000110025.12	+	protein_coding	KNOWN	SNX15	7	8	1.166738
chr11	65040901	65044828	65042864	ENSG00000168061.13	+	protein_coding	KNOWN	SAC3D1	7	3	1.199572
chr11	65044818	65058549	65051683	ENSG00000168060.14	-	protein_coding	KNOWN	NAALADL1	23	20	1.125464
chr11	65066300	65084164	65075232	ENSG00000146670.9	-	protein_coding	KNOWN	CDCA5	10	7	1.049714
chr11	65084223	65088400	65086311	ENSG00000162300.11	+	protein_coding	KNOWN	ZFPL1	14	8	1.041660
chr11	65084979	65089375	65087177	ENSG00000187066.8	-	protein_coding	KNOWN	TMEM262	6	4	1.041660
chr11	65089324	65111860	65100592	ENSG00000149823.7	+	protein_coding	KNOWN	VPS51	16	10	1.185116
chr11	65110714	65111695	65111204	ENSG00000254501.1	-	antisense	KNOWN	AP003068.9	1	2	1.252456
chr11	65111845	65116384	65114114	ENSG00000149809.14	+	protein_coding	KNOWN	TM7SF2	26	10	1.252456
chr11	65116403	65117708	65117055	ENSG00000174276.6	-	protein_coding	KNOWN	ZNHIT2	2	2	1.252456
chr11	65117157	65117458	65117307	ENSG00000255173.1	+	antisense	KNOWN	AP003068.12	1	2	1.252456
chr11	65118310	65119111	65118710	ENSG00000278952.1	+	TEC	KNOWN	RP11-399J13.2	1	1	1.252456
chr11	65120628	65122473	65121550	ENSG00000149806.10	-	protein_coding	KNOWN	FAU	9	5	1.252456
chr11	65121780	65134533	65128156	ENSG00000162298.16	-	protein_coding	KNOWN	SYVN1	15	16	1.281998
chr11	65122183	65127371	65124777	ENSG00000149792.8	+	protein_coding	KNOWN	MRPL49	9	5	1.252456
chr11	65129916	65129978	65129947	ENSG00000277547.1	-	miRNA	KNOWN	MIR6751	1	1	1.252456
chr11	65145691	65145972	65145831	ENSG00000254455.1	-	processed_pseudogene	KNOWN	HIGD1AP10	1	1	1.335549
chr11	65147584	65147778	65147681	ENSG00000222477.1	+	snRNA	KNOWN	RNU2-23P	1	1	1.335549
chr11	65160194	65160382	65160288	ENSG00000255058.1	-	processed_pseudogene	KNOWN	PDCL2P2	1	1	0.690325
chr11	65170154	65173244	65171699	ENSG00000204710.2	+	protein_coding	KNOWN	SPDYC	1	7	1.005358
chr11	65174117	65176470	65175293	ENSG00000255200.1	-	transcribed_processed_pseudogene	KNOWN	AP003068.18	2	1	1.005358
chr11	65175035	65175502	65175268	ENSG00000249251.1	-	processed_pseudogene	KNOWN	PGAM1P8	1	1	1.005358
chr11	65177606	65181834	65179720	ENSG00000254614.2	-	antisense	KNOWN	AP003068.23	2	2	1.005358
chr11	65180566	65212006	65196286	ENSG00000014216.15	+	protein_coding	KNOWN	CAPN1	28	22	1.026063
chr11	65213840	65242757	65228298	ENSG00000197847.12	+	unitary_pseudogene	KNOWN	SLC22A20	5	11	1.174743
chr11	65261762	65305589	65283675	ENSG00000014138.8	+	protein_coding	KNOWN	POLA2	8	18	0.991351
chr11	65286440	65286509	65286474	ENSG00000274509.1	+	miRNA	NOVEL	AP000944.1	1	1	1.083003
chr11	65314818	65322429	65318623	ENSG00000149798.4	+	protein_coding	KNOWN	CDC42EP2	2	2	1.296880
chr11	65333754	65353249	65343501	ENSG00000133884.9	+	protein_coding	KNOWN	DPF2	12	12	1.364634
chr11	65354767	65357613	65356190	ENSG00000173825.6	+	protein_coding	KNOWN	TIGD3	1	2	1.150885
chr11	65367438	65375299	65371368	ENSG00000255478.1	+	antisense	KNOWN	RP11-867O8.5	1	3	1.162463
chr11	65375192	65383701	65379446	ENSG00000162241.12	-	protein_coding	KNOWN	SLC25A45	15	10	1.168058
chr11	65386599	65413525	65400062	ENSG00000126391.13	+	protein_coding	KNOWN	FRMD8	9	11	1.418831
chr11	65422774	65445540	65434157	ENSG00000245532.5	+	lincRNA	KNOWN	NEAT1	5	3	1.412953
chr11	65423273	65423392	65423332	ENSG00000278144.1	+	misc_RNA	NOVEL	NEAT1_1	1	1	1.471279
chr11	65423638	65423742	65423690	ENSG00000278050.1	+	misc_RNA	NOVEL	NEAT1_2	1	1	1.471279
chr11	65423960	65424118	65424039	ENSG00000277599.1	+	misc_RNA	NOVEL	NEAT1_3	1	1	1.471279
chr11	65444458	65444557	65444507	ENSG00000273834.1	+	miRNA	KNOWN	MIR612	1	1	1.385837
chr11	65445541	65445598	65445569	ENSG00000275948.1	+	sRNA	NOVEL	mascRNA-menRNA	1	1	1.385837
chr11	65455258	65466720	65460989	ENSG00000173727.11	+	lincRNA	KNOWN	CMB9-22P13.1	2	3	1.100120
chr11	65487241	65488136	65487688	ENSG00000279243.1	-	lincRNA	KNOWN	CMB9-22P13.2	1	3	1.069128
chr11	65497762	65506516	65502139	ENSG00000251562.7	+	lincRNA	KNOWN	MALAT1	17	4	1.282422
chr11	65498010	65498405	65498207	ENSG00000270117.1	-	lincRNA	KNOWN	AP000769.7	1	1	1.282422
chr11	65502034	65503622	65502828	ENSG00000279576.1	-	protein_coding	KNOWN	AP000769.1	1	1	1.282422
chr11	65502914	65503008	65502961	ENSG00000278217.1	+	misc_RNA	NOVEL	MALAT1	1	1	1.282422
chr11	65506117	65506173	65506145	ENSG00000274072.1	+	sRNA	NOVEL	mascRNA-menRNA	1	1	1.282422
chr11	65514403	65514923	65514663	ENSG00000270526.1	-	processed_pseudogene	KNOWN	SNRPGP19	1	2	1.116824
chr11	65525077	65538704	65531890	ENSG00000142186.16	+	protein_coding	KNOWN	SCYL1	15	18	1.390999
chr11	65538560	65558930	65548745	ENSG00000168056.14	-	protein_coding	KNOWN	LTBP3	22	29	1.532313
chr11	65561484	65561607	65561545	ENSG00000279093.1	+	TEC	KNOWN	RP11-856B14.10	1	1	1.514753
chr11	65568482	65570423	65569452	ENSG00000260233.3	-	processed_transcript	KNOWN	SSSCA1-AS1	2	1	1.481187
chr11	65570430	65573942	65572186	ENSG00000173465.7	+	protein_coding	KNOWN	SSSCA1	7	4	1.361092
chr11	65572349	65574198	65573273	ENSG00000176973.7	+	protein_coding	KNOWN	FAM89B	3	2	1.361092
chr11	65576038	65592650	65584344	ENSG00000173442.12	+	protein_coding	KNOWN	EHBP1L1	11	19	1.436983
chr11	65585395	65650930	65618162	ENSG00000213445.8	+	protein_coding	KNOWN	SIPA1	12	17	1.719171
chr11	65592855	65595996	65594425	ENSG00000173338.12	-	protein_coding	KNOWN	KCNK7	6	4	1.836646
chr11	65597755	65615382	65606568	ENSG00000173327.7	-	protein_coding	KNOWN	MAP3K11	13	10	1.736306
chr11	65615773	65637439	65626606	ENSG00000197136.4	+	protein_coding	KNOWN	PCNXL3	5	35	1.643841
chr11	65636310	65636369	65636339	ENSG00000266041.1	+	miRNA	KNOWN	MIR4690	1	1	1.903436
chr11	65649192	65649253	65649222	ENSG00000265874.1	+	miRNA	KNOWN	MIR4489	1	1	1.903436
chr11	65653596	65663094	65658345	ENSG00000173039.18	-	protein_coding	KNOWN	RELA	27	12	1.542653
chr11	65695552	65695837	65695694	ENSG00000239356.3	+	misc_RNA	KNOWN	RN7SL309P	1	1	0.985733
chr11	65711996	65719604	65715800	ENSG00000172977.12	+	protein_coding	KNOWN	KAT5	17	14	1.267434
chr11	65714896	65720947	65717921	ENSG00000172922.8	-	protein_coding	KNOWN	RNASEH2C	7	5	1.267434
chr11	65726939	65728214	65727576	ENSG00000214659.4	+	processed_pseudogene	KNOWN	KRT8P26	1	1	1.267434
chr11	65745729	65771585	65758657	ENSG00000255557.1	+	lincRNA	KNOWN	RP11-770G2.2	1	2	0.572520
chr11	65775893	65780802	65778347	ENSG00000254470.2	-	protein_coding	KNOWN	AP5B1	1	2	1.306586
chr11	65787022	65797219	65792120	ENSG00000172818.9	+	protein_coding	KNOWN	OVOL1	3	4	1.266190
chr11	65789051	65790868	65789959	ENSG00000255120.5	-	antisense	KNOWN	OVOL1-AS1	3	2	1.279300
chr11	65795946	65797219	65796582	ENSG00000255404.1	-	antisense	KNOWN	RP11-770G2.5	1	2	1.249533
chr11	65823022	65862026	65842524	ENSG00000172757.12	-	protein_coding	KNOWN	CFL1	15	5	1.147821
chr11	65833641	65856896	65845268	ENSG00000172803.17	+	protein_coding	KNOWN	SNX32	9	13	1.152554
chr11	65857126	65867653	65862389	ENSG00000172732.11	+	protein_coding	KNOWN	MUS81	17	16	1.296191
chr11	65866441	65873592	65870016	ENSG00000172638.12	-	protein_coding	KNOWN	EFEMP2	20	12	1.574503
chr11	65879809	65883741	65881775	ENSG00000172543.7	+	protein_coding	KNOWN	CTSW	4	10	1.850103
chr11	65883741	65888539	65886140	ENSG00000172500.12	-	protein_coding	KNOWN	FIBP	13	10	1.850103
chr11	65890112	65891635	65890873	ENSG00000175602.3	+	protein_coding	KNOWN	CCDC85B	1	1	1.770690
chr11	65892049	65900573	65896311	ENSG00000175592.8	-	protein_coding	KNOWN	FOSL1	5	4	1.770690
chr11	65916808	65919117	65917962	ENSG00000175573.6	-	protein_coding	KNOWN	C11orf68	3	2	1.441799
chr11	65919257	65921561	65920409	ENSG00000175550.7	+	protein_coding	KNOWN	DRAP1	9	7	1.441799
chr11	65945445	65959963	65952704	ENSG00000175513.9	+	protein_coding	KNOWN	TSGA10IP	5	8	1.256052
chr11	65961689	65979828	65970758	ENSG00000175467.14	+	protein_coding	KNOWN	SART1	8	20	1.370353
chr11	65983679	65984331	65984005	ENSG00000254867.1	-	processed_pseudogene	KNOWN	RP11-1167A19.6	1	1	1.486851
chr11	65996545	66002176	65999360	ENSG00000175376.8	-	protein_coding	KNOWN	EIF1AD	11	6	1.104592
chr11	66002079	66004149	66003114	ENSG00000175334.7	+	protein_coding	KNOWN	BANF1	8	3	1.104592
chr11	66011841	66013505	66012673	ENSG00000175315.2	+	protein_coding	KNOWN	CST6	1	3	1.300234
chr11	66016752	66026517	66021634	ENSG00000175294.5	-	protein_coding	KNOWN	CATSPER1	2	12	1.300234
chr11	66041952	66049180	66045566	ENSG00000175229.6	-	protein_coding	KNOWN	GAL3ST3	3	3	1.324848
chr11	66050729	66069308	66060018	ENSG00000087365.14	+	protein_coding	KNOWN	SF3B2	17	23	1.387096
chr11	66067277	66069619	66068448	ENSG00000255038.1	-	antisense	KNOWN	RP11-1167A19.2	1	2	1.387096
chr11	66070363	66244747	66157555	ENSG00000175115.11	+	protein_coding	KNOWN	PACS1	15	24	0.790688
chr11	66164490	66164747	66164618	ENSG00000281025.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.593100
chr11	66244840	66246239	66245539	ENSG00000255320.1	-	antisense	KNOWN	RP11-755F10.1	1	2	1.084650
chr11	66257294	66267860	66262577	ENSG00000174996.11	+	protein_coding	KNOWN	KLC2	14	16	1.365315
chr11	66259567	66261834	66260700	ENSG00000254461.1	-	antisense	KNOWN	RP11-755F10.3	1	3	1.365315
chr11	66260055	66260173	66260114	ENSG00000280605.1	+	miRNA	NOVEL	AP001107.1	1	1	1.365315
chr11	66264777	66265666	66265221	ENSG00000254855.1	-	antisense	KNOWN	RP11-867G23.1	1	3	1.365315
chr11	66267635	66268129	66267882	ENSG00000254762.1	-	antisense	KNOWN	RP11-867G23.2	1	2	1.365315
chr11	66268533	66277492	66273012	ENSG00000174903.14	+	protein_coding	KNOWN	RAB1B	3	7	1.294555
chr11	66269832	66278525	66274178	ENSG00000245156.1	-	lincRNA	KNOWN	RP11-867G23.3	1	2	1.282336
chr11	66276779	66277492	66277135	ENSG00000254452.1	-	antisense	KNOWN	RP11-867G23.4	2	2	1.280711
chr11	66278190	66285301	66281745	ENSG00000174871.10	+	protein_coding	KNOWN	CNIH2	6	6	1.280711
chr11	66284580	66289170	66286875	ENSG00000174851.14	-	protein_coding	KNOWN	YIF1A	14	8	1.280711
chr11	66291870	66296664	66294267	ENSG00000179292.4	+	protein_coding	KNOWN	TMEM151A	1	2	1.332670
chr11	66312853	66319237	66316045	ENSG00000254458.1	+	antisense	KNOWN	RP11-867G23.13	1	2	1.123876
chr11	66314487	66317044	66315765	ENSG00000174807.3	-	protein_coding	KNOWN	CD248	1	1	1.123876
chr11	66330242	66336840	66333541	ENSG00000174791.10	-	protein_coding	KNOWN	RIN1	8	10	1.531615
chr11	66334494	66339875	66337184	ENSG00000254756.1	+	antisense	KNOWN	RP11-867G23.12	1	3	1.531615
chr11	66337333	66345125	66341229	ENSG00000174744.13	-	protein_coding	KNOWN	BRMS1	9	10	1.531615
chr11	66345372	66347692	66346532	ENSG00000174684.6	-	protein_coding	KNOWN	B4GAT1	1	2	1.531615
chr11	66347950	66364804	66356377	ENSG00000255468.6	+	antisense	KNOWN	RP11-867G23.8	3	5	0.908705
chr11	66362521	66372214	66367367	ENSG00000174669.11	-	protein_coding	KNOWN	SLC29A2	7	13	0.893824
chr11	66374138	66374435	66374286	ENSG00000276918.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.134636
chr11	66389609	66390168	66389888	ENSG00000254736.1	+	processed_pseudogene	KNOWN	BRD9P1	1	1	0.981847
chr11	66393449	66393612	66393530	ENSG00000202317.1	+	snRNA	KNOWN	RNU1-84P	1	1	0.629258
chr11	66409158	66417137	66413147	ENSG00000254510.1	+	processed_transcript	KNOWN	RP11-867G23.10	3	4	0.975631
chr11	66421004	66426707	66423855	ENSG00000174576.8	+	protein_coding	KNOWN	NPAS4	3	8	1.016441
chr11	66432763	66432902	66432832	ENSG00000201733.1	+	snoRNA	NOVEL	SNORA43	1	1	1.313071
chr11	66435075	66466738	66450906	ENSG00000174547.13	-	protein_coding	KNOWN	MRPL11	6	6	1.138014
chr11	66454234	66454581	66454407	ENSG00000254596.1	+	processed_pseudogene	KNOWN	CTD-3074O7.7	1	1	0.981938
chr11	66466327	66477337	66471832	ENSG00000174516.14	+	protein_coding	KNOWN	PELI3	9	8	1.013414
chr11	66473490	66480233	66476861	ENSG00000255517.6	-	antisense	KNOWN	CTD-3074O7.5	5	4	1.029165
chr11	66480013	66509657	66494835	ENSG00000254986.7	+	protein_coding	KNOWN	DPP3	16	18	1.306484
chr11	66509079	66533613	66521346	ENSG00000256349.1	+	protein_coding	KNOWN	CTD-3074O7.11	1	17	0.904482
chr11	66510606	66533627	66522116	ENSG00000174483.19	+	protein_coding	KNOWN	BBS1	25	17	0.883429
chr11	66520637	66546238	66533437	ENSG00000174165.7	-	protein_coding	KNOWN	ZDHHC24	4	5	0.893664
chr11	66546395	66563329	66554862	ENSG00000248746.5	+	protein_coding	KNOWN	ACTN3	3	21	1.012734
chr11	66558866	66560384	66559625	ENSG00000250105.1	-	lincRNA	KNOWN	CTD-3074O7.2	1	2	1.042804
chr11	66563463	66568841	66566152	ENSG00000174080.10	-	protein_coding	KNOWN	CTSF	9	13	1.042804
chr11	66590176	66593083	66591629	ENSG00000182791.4	-	protein_coding	KNOWN	CCDC87	1	1	0.884896
chr11	66592821	66606019	66599420	ENSG00000173992.8	+	protein_coding	KNOWN	CCS	9	8	0.884896
chr11	66614964	66615090	66615027	ENSG00000199325.1	-	snRNA	KNOWN	RNU4-39P	1	1	1.014727
chr11	66616582	66627347	66621964	ENSG00000239306.4	+	protein_coding	KNOWN	RBM14	9	3	1.014727
chr11	66616626	66646469	66631547	ENSG00000248643.5	+	protein_coding	KNOWN	RBM14-RBM4	4	3	0.990515
chr11	66638617	66666682	66652649	ENSG00000173933.19	+	protein_coding	KNOWN	RBM4	13	4	0.828760
chr11	66664998	66677921	66671459	ENSG00000173914.11	-	protein_coding	KNOWN	RBM4B	8	4	0.751801
chr11	66666036	66668374	66667205	ENSG00000258297.1	+	antisense	KNOWN	RP11-658F2.8	2	1	0.731816
chr11	66685248	66729226	66707237	ENSG00000173898.11	-	protein_coding	KNOWN	SPTBN2	11	38	1.164308
chr11	66712720	66713009	66712864	ENSG00000239553.3	-	misc_RNA	KNOWN	RN7SL12P	1	1	1.083379
chr11	66744451	66843328	66793889	ENSG00000173715.15	+	protein_coding	KNOWN	C11orf80	18	17	0.573441
chr11	66761575	66762399	66761987	ENSG00000213409.4	-	processed_pseudogene	KNOWN	C1QBPP2	1	1	0.660726
chr11	66771246	66771667	66771456	ENSG00000254984.1	-	processed_pseudogene	KNOWN	FTLP6	1	1	0.298992
chr11	66842835	66846546	66844690	ENSG00000173653.7	+	protein_coding	KNOWN	RCE1	9	8	0.763570
chr11	66848233	66958376	66903304	ENSG00000173599.13	-	protein_coding	KNOWN	PC	14	23	0.973466
chr11	66856647	66860475	66858561	ENSG00000173621.8	+	protein_coding	KNOWN	LRFN4	3	3	1.368678
chr11	66882812	66882870	66882841	ENSG00000274255.1	-	miRNA	NOVEL	AP003176.1	1	1	1.079851
chr11	66919762	66919823	66919792	ENSG00000239099.1	+	snRNA	KNOWN	RNU7-23P	1	1	0.684488
chr11	66934434	66934506	66934470	ENSG00000266423.1	-	miRNA	KNOWN	MIR3163	1	1	0.827289
chr11	66975277	66977004	66976140	ENSG00000173237.4	+	protein_coding	KNOWN	C11orf86	1	2	0.978335
chr11	67006778	67050863	67028820	ENSG00000173227.13	+	protein_coding	KNOWN	SYT12	7	11	0.919130
chr11	67056818	67072013	67064415	ENSG00000173156.6	+	protein_coding	KNOWN	RHOD	3	5	1.110451
chr11	67119269	67258087	67188678	ENSG00000173120.14	+	protein_coding	KNOWN	KDM2A	15	21	0.664655
chr11	67195569	67197167	67196368	ENSG00000179038.8	-	transcribed_processed_pseudogene	KNOWN	RP11-157K17.5	2	1	0.842964
chr11	67266410	67286556	67276483	ENSG00000173020.10	+	protein_coding	KNOWN	ADRBK1	14	21	1.245664
chr11	67288547	67302485	67295516	ENSG00000172932.14	+	protein_coding	KNOWN	ANKRD13D	18	16	1.318587
chr11	67303448	67312607	67308027	ENSG00000172830.12	+	protein_coding	KNOWN	SSH3	11	14	1.334844
chr11	67310006	67310065	67310035	ENSG00000275200.1	+	miRNA	NOVEL	AP001885.1	1	1	1.379888
chr11	67317871	67398410	67358140	ENSG00000172613.7	+	protein_coding	KNOWN	RAD9A	11	11	1.199279
chr11	67350777	67356972	67353874	ENSG00000175482.8	-	protein_coding	KNOWN	POLD4	12	4	1.145204
chr11	67351572	67373584	67362578	ENSG00000256514.1	-	protein_coding	KNOWN	AP003419.11	1	4	1.150045
chr11	67353629	67354348	67353988	ENSG00000274251.1	+	lincRNA	KNOWN	CTC-1337H24.3	1	2	1.145204
chr11	67362414	67362708	67362561	ENSG00000201684.1	+	misc_RNA	KNOWN	RN7SKP239	1	1	1.145204
chr11	67364168	67374177	67369172	ENSG00000175505.10	-	protein_coding	KNOWN	CLCF1	2	3	1.157611
chr11	67374416	67374932	67374674	ENSG00000275484.1	+	lincRNA	KNOWN	CTC-1337H24.4	1	1	1.174928
chr11	67395210	67395311	67395260	ENSG00000253024.1	-	snRNA	KNOWN	RNU6-1238P	1	1	1.477775
chr11	67398183	67421183	67409683	ENSG00000172531.14	-	protein_coding	KNOWN	PPP1CA	11	7	1.324609
chr11	67403915	67410089	67407002	ENSG00000175463.11	+	protein_coding	KNOWN	TBC1D10C	9	9	1.473183
chr11	67414968	67425607	67420287	ENSG00000172508.10	+	protein_coding	KNOWN	CARNS1	7	11	1.162788
chr11	67428460	67435408	67431934	ENSG00000175634.14	+	protein_coding	KNOWN	RPS6KB2	12	16	1.359654
chr11	67431367	67435399	67433383	ENSG00000255949.1	-	antisense	KNOWN	AP003419.16	1	2	1.415668
chr11	67435510	67443821	67439665	ENSG00000172725.13	-	protein_coding	KNOWN	CORO1B	10	12	1.415668
chr11	67435510	67438067	67436788	ENSG00000213402.2	-	protein_coding	KNOWN	PTPRCAP	1	2	1.415668
chr11	67451301	67452729	67452015	ENSG00000175514.2	-	protein_coding	KNOWN	GPR152	1	1	1.307847
chr11	67452406	67460313	67456359	ENSG00000175544.13	+	protein_coding	KNOWN	CABP4	7	7	1.307847
chr11	67461710	67469272	67465491	ENSG00000172663.8	-	protein_coding	KNOWN	TMEM134	17	7	1.307847
chr11	67483041	67491103	67487072	ENSG00000110711.9	+	protein_coding	KNOWN	AIP	4	6	1.007702
chr11	67490245	67490315	67490280	ENSG00000276769.1	+	miRNA	KNOWN	MIR6752	1	1	1.281187
chr11	67491768	67506263	67499015	ENSG00000110697.12	-	protein_coding	KNOWN	PITPNM1	16	24	1.281187
chr11	67506497	67508649	67507573	ENSG00000167797.7	-	protein_coding	KNOWN	CDK2AP2	5	4	1.281187
chr11	67518912	67523428	67521170	ENSG00000167791.11	-	protein_coding	KNOWN	CABP2	3	7	1.113177
chr11	67583595	67586660	67585127	ENSG00000084207.15	+	protein_coding	KNOWN	GSTP1	7	7	0.968186
chr11	67602880	67606706	67604793	ENSG00000184224.3	-	lincRNA	KNOWN	C11orf72	2	3	0.726995
chr11	67605521	67606642	67606081	ENSG00000255119.1	+	antisense	KNOWN	RP11-655M14.12	1	2	0.726995
chr11	67606852	67612535	67609693	ENSG00000167792.11	+	protein_coding	KNOWN	NDUFV1	28	10	0.802894
chr11	67612653	67616257	67614455	ENSG00000231793.4	-	unitary_pseudogene	KNOWN	DOC2GP	2	10	0.897080
chr11	67618279	67627304	67622791	ENSG00000255318.1	-	lincRNA	KNOWN	RP11-655M14.13	1	2	0.897080
chr11	67627938	67629930	67628934	ENSG00000167799.9	-	protein_coding	KNOWN	NUDT8	3	4	0.897080
chr11	67631303	67639560	67635431	ENSG00000167800.9	-	protein_coding	KNOWN	TBX10	1	8	0.925342
chr11	67642555	67650659	67646607	ENSG00000132744.7	-	protein_coding	KNOWN	ACY3	2	8	0.905113
chr11	67651576	67653404	67652490	ENSG00000227834.1	-	unitary_pseudogene	KNOWN	AP003385.2	1	3	0.676954
chr11	67662162	67681200	67671681	ENSG00000132746.14	-	protein_coding	KNOWN	ALDH3B2	8	10	0.817299
chr11	67682772	67683058	67682915	ENSG00000239559.2	-	processed_pseudogene	KNOWN	RPL37P2	1	1	0.915494
chr11	67711702	67716005	67713853	ENSG00000184795.9	-	unprocessed_pseudogene	KNOWN	UNC93B5	1	3	0.638684
chr11	67722483	67723455	67722969	ENSG00000235855.3	-	unprocessed_pseudogene	KNOWN	OR7E145P	1	1	0.638684
chr11	67734521	67734608	67734564	ENSG00000266451.1	-	miRNA	NOVEL	AP003385.1	1	1	0.280437
chr11	67735608	67736559	67736083	ENSG00000254447.1	-	unprocessed_pseudogene	KNOWN	OR7E11P	1	1	0.280437
chr11	67744322	67744645	67744483	ENSG00000254883.1	+	processed_pseudogene	KNOWN	RP11-655M14.14	1	1	0.280437
chr11	67749043	67756968	67753005	ENSG00000255147.1	-	unprocessed_pseudogene	KNOWN	RP11-655M14.4	1	3	0.416992
chr11	67785273	67792335	67788804	ENSG00000227620.4	+	unprocessed_pseudogene	KNOWN	ALG1L8P	1	8	0.478282
chr11	67791648	67805336	67798492	ENSG00000160172.10	-	transcribed_unprocessed_pseudogene	KNOWN	FAM86C2P	5	8	0.769044
chr11	67812557	67873367	67842962	ENSG00000273819.1	-	unprocessed_pseudogene	KNOWN	ENPP7P7	1	4	0.524914
chr11	67840942	67841049	67840995	ENSG00000254792.1	+	processed_pseudogene	KNOWN	RP11-119D9.4	1	1	0.482528
chr11	67886477	67906350	67896413	ENSG00000251637.6	+	lincRNA	KNOWN	RP11-119D9.1	3	3	0.333709
chr11	67895631	67895737	67895684	ENSG00000206587.1	+	snRNA	KNOWN	RNU6-46P	1	1	0.353767
chr11	67925651	67926431	67926041	ENSG00000243672.1	-	processed_pseudogene	KNOWN	RPS3AP40	1	1	0.248111
chr11	67933214	67933362	67933288	ENSG00000221553.1	+	miRNA	NOVEL	AC004924.1	1	1	0.217523
chr11	67934563	67955802	67945182	ENSG00000254610.2	-	lincRNA	KNOWN	RP5-903G2.2	1	4	0.350247
chr11	67935558	67935926	67935742	ENSG00000254850.2	+	processed_pseudogene	KNOWN	RP5-901A4.4	1	1	0.217523
chr11	67965873	67966227	67966050	ENSG00000255230.1	-	processed_pseudogene	KNOWN	RP5-901A4.5	1	1	0.703295
chr11	67974286	67975243	67974764	ENSG00000255554.1	-	unprocessed_pseudogene	KNOWN	OR7E1P	1	1	0.418136
chr11	67991104	68004982	67998043	ENSG00000110057.7	-	protein_coding	KNOWN	UNC93B1	10	11	0.936442
chr11	68008578	68029282	68018930	ENSG00000006534.15	+	protein_coding	KNOWN	ALDH3B1	10	10	1.267950
chr11	68024809	68030461	68027635	ENSG00000255306.1	-	antisense	KNOWN	RP5-901A4.1	1	4	1.285491
chr11	68030617	68036644	68033630	ENSG00000110717.10	+	protein_coding	KNOWN	NDUFS8	15	7	1.208110
chr11	68032864	68032922	68032893	ENSG00000277703.1	+	miRNA	KNOWN	MIR7113	1	1	1.208110
chr11	68033897	68033981	68033939	ENSG00000266737.1	+	miRNA	KNOWN	MIR4691	1	1	1.208110
chr11	68039016	68050895	68044955	ENSG00000110719.9	+	protein_coding	KNOWN	TCIRG1	16	20	1.200260
chr11	68044794	68044957	68044875	ENSG00000275022.1	+	miRNA	KNOWN	MIR6753	1	1	1.208110
chr11	68050740	68053762	68052251	ENSG00000255031.5	+	antisense	KNOWN	RP11-802E16.3	3	3	1.104031
chr11	68052859	68121444	68087151	ENSG00000110721.11	-	protein_coding	KNOWN	CHKA	8	12	0.749057
chr11	68122053	68130518	68126285	ENSG00000255236.2	+	antisense	KNOWN	CTD-2655K5.1	2	2	0.634000
chr11	68154863	68213828	68184345	ENSG00000110066.14	-	protein_coding	KNOWN	SUV420H1	15	12	0.486799
chr11	68261335	68272001	68266668	ENSG00000171067.10	-	protein_coding	KNOWN	C11orf24	9	5	0.822043
chr11	68312609	68449275	68380942	ENSG00000162337.11	+	protein_coding	KNOWN	LRP5	7	23	0.818606
chr11	68460731	68615334	68538032	ENSG00000110075.14	+	protein_coding	KNOWN	PPP6R3	26	25	0.422458
chr11	68488609	68488840	68488724	ENSG00000254856.1	-	processed_pseudogene	KNOWN	NDUFA3P2	1	1	0.699077
chr11	68505572	68505651	68505611	ENSG00000222339.1	-	miRNA	NOVEL	AP000807.2	1	1	0.306731
chr11	68506083	68506166	68506124	ENSG00000212093.1	-	miRNA	NOVEL	AP000807.1	1	1	0.306731
chr11	68612899	68616711	68614805	ENSG00000260808.1	-	lincRNA	KNOWN	CTD-2007L18.5	3	3	0.553572
chr11	68619499	68619595	68619547	ENSG00000266854.1	+	miRNA	NOVEL	AP003096.1	1	1	0.553572
chr11	68683779	68691175	68687477	ENSG00000069482.6	+	protein_coding	KNOWN	GAL	2	6	0.532130
chr11	68707440	68751564	68729502	ENSG00000132749.10	-	protein_coding	KNOWN	MTL5	9	10	0.506780
chr11	68754620	68844410	68799515	ENSG00000110090.12	-	protein_coding	KNOWN	CPT1A	9	19	0.844926
chr11	68870664	68874542	68872603	ENSG00000250508.1	+	lincRNA	KNOWN	RP11-757G1.6	1	2	0.551423
chr11	68891276	68903835	68897555	ENSG00000197345.12	-	protein_coding	KNOWN	MRPL21	8	7	0.720544
chr11	68903842	68940602	68922222	ENSG00000132740.8	+	protein_coding	KNOWN	IGHMBP2	12	15	0.811522
chr11	68941503	68942852	68942177	ENSG00000255741.1	-	antisense	KNOWN	RP11-757G1.5	1	2	0.855231
chr11	68980021	68980986	68980503	ENSG00000172938.3	-	protein_coding	KNOWN	MRGPRD	1	1	0.700933
chr11	69000765	69002048	69001406	ENSG00000261625.1	-	sense_overlapping	KNOWN	RP11-554A11.4	1	1	0.766592
chr11	69004394	69005100	69004747	ENSG00000261276.1	+	antisense	KNOWN	RP11-554A11.5	1	2	0.766592
chr11	69004395	69013409	69008902	ENSG00000172935.8	-	protein_coding	KNOWN	MRGPRF	3	3	0.902843
chr11	69012283	69018447	69015365	ENSG00000256508.2	+	antisense	KNOWN	MRGPRF-AS1	3	6	1.126757
chr11	69048897	69090604	69069750	ENSG00000162341.15	+	protein_coding	KNOWN	TPCN2	5	25	0.941549
chr11	69083176	69083258	69083217	ENSG00000265539.1	+	miRNA	KNOWN	MIR3164	1	1	1.029595
chr11	69103493	69109094	69106293	ENSG00000260895.1	+	lincRNA	KNOWN	RP11-554A11.7	1	2	1.154923
chr11	69147228	69171564	69159396	ENSG00000261070.1	-	lincRNA	KNOWN	RP11-554A11.8	1	3	0.852002
chr11	69155910	69159752	69157831	ENSG00000259799.1	+	antisense	KNOWN	RP11-554A11.9	2	2	0.881365
chr11	69294138	69367726	69330932	ENSG00000172927.7	+	protein_coding	KNOWN	MYEOV	12	5	0.827608
chr11	69303412	69303807	69303609	ENSG00000213275.2	-	processed_pseudogene	KNOWN	IFITM9P	1	1	0.875368
chr11	69371463	69372512	69371987	ENSG00000260877.2	+	lincRNA	KNOWN	RP11-211G23.2	1	2	0.510821
chr11	69414307	69416832	69415569	ENSG00000259854.1	+	lincRNA	KNOWN	RP11-211G23.1	1	2	0.671078
chr11	69425690	69429621	69427655	ENSG00000255980.1	+	lincRNA	KNOWN	AP000439.1	1	2	0.671078
chr11	69438365	69444743	69441554	ENSG00000255606.1	-	lincRNA	KNOWN	AP000439.2	1	2	0.899347
chr11	69467598	69469705	69468651	ENSG00000261347.1	+	lincRNA	KNOWN	AP000439.5	1	2	0.798743
chr11	69477133	69479940	69478536	ENSG00000255774.1	-	lincRNA	KNOWN	AP000439.3	1	2	0.746756
chr11	69641087	69654474	69647780	ENSG00000110092.3	+	protein_coding	KNOWN	CCND1	6	5	0.921981
chr11	69653076	69675416	69664246	ENSG00000149716.12	-	protein_coding	KNOWN	ORAOV1	18	7	1.116561
chr11	69671952	69672075	69672013	ENSG00000281781.1	+	protein_coding	KNOWN	AP001888.1	1	2	0.812214
chr11	69698232	69704642	69701437	ENSG00000162344.3	-	protein_coding	KNOWN	FGF19	1	3	0.671416
chr11	69737298	69738017	69737657	ENSG00000256441.1	-	processed_pseudogene	KNOWN	RP11-300I6.5	1	1	0.793768
chr11	69771016	69775403	69773209	ENSG00000075388.3	-	protein_coding	KNOWN	FGF4	2	3	0.569641
chr11	69810224	69819024	69814624	ENSG00000186895.2	-	protein_coding	KNOWN	FGF3	1	3	0.692061
chr11	69909184	69910994	69910089	ENSG00000260348.1	-	lincRNA	KNOWN	RP11-643C9.1	1	2	0.833396
chr11	69921638	69926813	69924225	ENSG00000260679.1	-	lincRNA	KNOWN	RP11-643C9.2	1	2	0.867476
chr11	69985876	70015815	70000845	ENSG00000255191.1	+	lincRNA	KNOWN	RP11-626H12.1	1	2	0.361645
chr11	70014858	70021059	70017958	ENSG00000254605.1	-	lincRNA	KNOWN	RP11-626H12.2	2	3	0.258502
chr11	70056230	70065371	70060800	ENSG00000248844.6	-	lincRNA	KNOWN	RP11-626H12.3	2	2	-0.378035
chr11	70072434	70075433	70073933	ENSG00000254417.1	-	antisense	KNOWN	ANO1-AS2	2	3	0.720581
chr11	70075363	70075469	70075416	ENSG00000202070.1	+	snRNA	KNOWN	RNU6-1175P	1	1	0.720581
chr11	70078302	70189528	70133915	ENSG00000131620.17	+	protein_coding	KNOWN	ANO1	10	26	0.692962
chr11	70129297	70149623	70139460	ENSG00000255143.1	+	sense_overlapping	KNOWN	RP11-805J14.3	1	2	0.434509
chr11	70187788	70188509	70188148	ENSG00000254902.1	-	antisense	KNOWN	ANO1-AS1	1	2	0.755428
chr11	70203163	70207390	70205276	ENSG00000168040.4	+	protein_coding	KNOWN	FADD	1	2	0.666228
chr11	70206291	70207390	70206840	ENSG00000254721.1	-	antisense	KNOWN	RP11-805J14.5	2	2	0.666228
chr11	70270700	70384403	70327551	ENSG00000131626.15	+	protein_coding	KNOWN	PPFIA1	24	29	0.591958
chr11	70278921	70279297	70279109	ENSG00000255329.1	-	processed_pseudogene	KNOWN	H2AFZP4	1	1	0.302352
chr11	70282367	70363368	70322867	ENSG00000254604.1	-	antisense	KNOWN	AP000487.6	1	2	0.652739
chr11	70283955	70284070	70284012	ENSG00000221333.1	+	miRNA	KNOWN	MIR548K	1	1	0.302352
chr11	70319928	70321415	70320671	ENSG00000254484.1	+	sense_intronic	KNOWN	CTA-797E19.1	1	2	0.742407
chr11	70324871	70327209	70326040	ENSG00000255539.1	-	antisense	KNOWN	CTA-797E19.2	1	2	0.742407
chr11	70358198	70358677	70358437	ENSG00000254495.1	-	antisense	KNOWN	AP000487.4	1	2	0.765631
chr11	70372246	70398488	70385367	ENSG00000246889.2	-	antisense	KNOWN	AP000487.5	3	2	0.517322
chr11	70398404	70436584	70417494	ENSG00000085733.15	+	protein_coding	KNOWN	CTTN	15	19	0.859098
chr11	70467856	71252577	70860216	ENSG00000162105.16	-	protein_coding	KNOWN	SHANK2	22	25	0.365904
chr11	70477277	70477592	70477434	ENSG00000227726.1	-	sense_intronic	KNOWN	AP001271.3	1	2	0.312322
chr11	70603304	70604859	70604081	ENSG00000279459.1	+	TEC	KNOWN	RP11-826F13.1	1	1	0.549915
chr11	70631094	70635490	70633292	ENSG00000226627.1	+	antisense	KNOWN	SHANK2-AS1	1	3	0.572882
chr11	70646165	70647562	70646863	ENSG00000236262.1	+	antisense	KNOWN	SHANK2-AS2	1	2	0.572882
chr11	70705167	70705269	70705218	ENSG00000207196.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.152252
chr11	70705605	70706068	70705836	ENSG00000280089.1	-	TEC	KNOWN	CMB9-52H4.1	1	1	0.152252
chr11	70862790	70865115	70863952	ENSG00000171671.6	+	antisense	KNOWN	SHANK2-AS3	1	3	0.340671
chr11	70872270	70872368	70872319	ENSG00000263744.1	-	miRNA	KNOWN	MIR3664	1	1	0.340671
chr11	71382601	71423423	71403012	ENSG00000172900.11	-	unitary_pseudogene	KNOWN	FLJ42102	3	8	0.335166
chr11	71428193	71452868	71440530	ENSG00000172893.15	-	protein_coding	KNOWN	DHCR7	12	9	0.678855
chr11	71448674	71452157	71450415	ENSG00000254682.1	+	antisense	KNOWN	RP11-660L16.2	1	2	0.818348
chr11	71453109	71524107	71488608	ENSG00000172890.11	+	protein_coding	KNOWN	NADSYN1	23	21	0.642829
chr11	71473503	71473568	71473535	ENSG00000278349.1	+	miRNA	KNOWN	MIR6754	1	1	0.676954
chr11	71506061	71506380	71506220	ENSG00000254924.2	-	processed_pseudogene	KNOWN	RP11-684B2.3	1	1	0.708663
chr11	71527267	71528674	71527970	ENSG00000244411.3	+	protein_coding	KNOWN	KRTAP5-7	1	1	0.182845
chr11	71538025	71539207	71538616	ENSG00000241233.3	+	protein_coding	KNOWN	KRTAP5-8	1	1	0.244727
chr11	71548418	71549553	71548985	ENSG00000254997.3	+	protein_coding	KNOWN	KRTAP5-9	1	1	0.244727
chr11	71565563	71568934	71567248	ENSG00000204572.8	+	protein_coding	KNOWN	KRTAP5-10	2	3	0.293951
chr11	71568680	71568934	71568807	ENSG00000248903.1	+	processed_pseudogene	KNOWN	AP000867.14	1	1	0.293951
chr11	71579714	71603353	71591533	ENSG00000204571.5	-	protein_coding	KNOWN	KRTAP5-11	4	3	0.455636
chr11	71579728	71579848	71579788	ENSG00000249387.1	-	processed_pseudogene	KNOWN	KRTAP5-14P	1	1	0.710121
chr11	71593454	71594382	71593918	ENSG00000184055.4	+	unprocessed_pseudogene	KNOWN	OR7E87P	1	1	0.259636
chr11	71603260	71608040	71605650	ENSG00000255562.2	+	transcribed_processed_pseudogene	KNOWN	UNC93B6	2	3	0.259636
chr11	71620020	71621032	71620526	ENSG00000255261.1	+	unprocessed_pseudogene	KNOWN	OR7E4P	1	1	0.467137
chr11	71629045	71629421	71629233	ENSG00000255415.1	+	processed_pseudogene	KNOWN	RP11-684B2.5	1	1	0.467137
chr11	71662547	71662695	71662621	ENSG00000221458.1	-	miRNA	NOVEL	AP003498.1	1	1	0.352519
chr11	71669520	71670297	71669908	ENSG00000239481.1	+	processed_pseudogene	KNOWN	RPS3AP41	1	1	0.294720
chr11	71690453	71690657	71690555	ENSG00000254805.1	-	processed_pseudogene	KNOWN	SNRPCP14	1	1	0.033777
chr11	71701268	71705404	71703336	ENSG00000254972.1	-	lincRNA	KNOWN	RP11-167J8.3	1	3	0.033777
chr11	71711740	71781183	71746461	ENSG00000255319.5	+	transcribed_unprocessed_pseudogene	KNOWN	ENPP7P8	3	5	0.377978
chr11	71787510	71801236	71794373	ENSG00000158483.15	+	protein_coding	KNOWN	FAM86C1	6	5	0.859701
chr11	71794363	71818238	71806300	ENSG00000248671.7	-	processed_transcript	KNOWN	ALG1L9P	4	4	0.742416
chr11	71800541	71804640	71802590	ENSG00000254978.2	-	transcribed_unprocessed_pseudogene	KNOWN	ALG1L9P	1	4	0.910822
chr11	71802585	71802649	71802617	ENSG00000264091.1	-	miRNA	NOVEL	AP002495.1	1	1	0.910822
chr11	71814045	71821548	71817796	ENSG00000214534.4	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF705E	2	5	0.422816
chr11	71833200	71837710	71835455	ENSG00000184276.2	+	protein_coding	KNOWN	DEFB108B	2	3	-0.002224
chr11	71845196	71845245	71845220	ENSG00000252902.1	-	rRNA	KNOWN	RNA5SP342	1	1	-0.002224
chr11	71856277	71863658	71859967	ENSG00000255157.1	+	transcribed_unprocessed_pseudogene	KNOWN	CTD-2313N18.8	2	2	0.220507
chr11	71865509	71928654	71897081	ENSG00000254469.7	-	protein_coding	KNOWN	RP11-849H4.2	9	5	0.243798
chr11	71878453	71884561	71881507	ENSG00000225805.4	+	protein_coding	KNOWN	CTD-2313N18.7	1	2	-0.056331
chr11	71893410	71894433	71893921	ENSG00000228915.3	+	unprocessed_pseudogene	KNOWN	OR7E128P	1	1	0.296488
chr11	71903194	71904081	71903637	ENSG00000254593.1	+	unprocessed_pseudogene	KNOWN	OR7E126P	1	1	0.296488
chr11	71905107	71905194	71905150	ENSG00000266859.1	+	miRNA	NOVEL	AP000719.1	1	1	0.296488
chr11	71928701	71997597	71963149	ENSG00000137522.17	+	protein_coding	KNOWN	RNF121	14	9	0.588367
chr11	71938671	71939544	71939107	ENSG00000255296.1	-	processed_pseudogene	KNOWN	RP11-757C15.4	1	2	0.679831
chr11	71998541	72005715	72002128	ENSG00000137496.17	+	protein_coding	KNOWN	IL18BP	14	8	0.861379
chr11	72002864	72080693	72041778	ENSG00000137497.17	-	protein_coding	KNOWN	NUMA1	34	27	1.039470
chr11	72014291	72020910	72017600	ENSG00000251143.1	+	antisense	KNOWN	RP11-849H4.4	1	4	1.466032
chr11	72072228	72072302	72072265	ENSG00000263742.1	-	miRNA	KNOWN	MIR3165	1	1	0.850984
chr11	72078330	72078420	72078375	ENSG00000212089.1	-	miRNA	NOVEL	AP002490.1	1	1	0.850984
chr11	72080331	72110782	72095556	ENSG00000184154.12	+	protein_coding	KNOWN	LRTOMT	23	9	0.903506
chr11	72085895	72103387	72094641	ENSG00000149357.9	-	protein_coding	KNOWN	LAMTOR1	8	5	0.906152
chr11	72106378	72112780	72109579	ENSG00000110200.8	-	protein_coding	KNOWN	ANAPC15	17	6	0.979274
chr11	72114869	72139892	72127380	ENSG00000110203.8	+	protein_coding	KNOWN	FOLR3	6	6	0.931682
chr11	72131282	72131907	72131594	ENSG00000257075.1	+	processed_pseudogene	KNOWN	RPEP6	1	1	0.746964
chr11	72158822	72159861	72159341	ENSG00000256518.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-807H22.5	2	3	0.682348
chr11	72163322	72209241	72186281	ENSG00000204971.3	-	antisense	KNOWN	RP11-807H22.7	1	3	0.813691
chr11	72172439	72178042	72175240	ENSG00000255860.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-807H22.6	2	4	0.874045
chr11	72189558	72196301	72192929	ENSG00000110195.11	+	protein_coding	KNOWN	FOLR1	4	6	0.801605
chr11	72216601	72221950	72219275	ENSG00000165457.13	+	protein_coding	KNOWN	FOLR2	10	8	0.840229
chr11	72223701	72239105	72231403	ENSG00000165458.13	+	protein_coding	KNOWN	INPPL1	16	30	1.146190
chr11	72239077	72245664	72242370	ENSG00000165462.5	-	protein_coding	KNOWN	PHOX2A	3	3	1.357803
chr11	72249856	72251288	72250572	ENSG00000228286.3	-	processed_pseudogene	KNOWN	AP000593.5	1	1	1.019472
chr11	72280151	72281178	72280664	ENSG00000213365.3	+	processed_pseudogene	KNOWN	AP000593.6	1	2	0.524951
chr11	72292425	72434680	72363552	ENSG00000162129.12	-	protein_coding	KNOWN	CLPB	14	18	0.863892
chr11	72302139	72302965	72302552	ENSG00000255843.1	+	antisense	KNOWN	AP000593.7	1	2	0.960126
chr11	72351347	72353210	72352278	ENSG00000256739.1	+	antisense	KNOWN	RP11-45F15.1	1	2	1.031385
chr11	72354516	72363555	72359035	ENSG00000255672.1	+	antisense	KNOWN	RP11-45F15.2	1	3	1.031385
chr11	72410716	72412079	72411397	ENSG00000256403.1	+	antisense	KNOWN	RP11-7N14.1	1	2	0.874400
chr11	72478221	72479237	72478729	ENSG00000237408.1	+	unitary_pseudogene	KNOWN	ART2BP	1	2	0.631574
chr11	72519986	72521733	72520859	ENSG00000238048.1	+	unprocessed_pseudogene	KNOWN	ART2P	1	2	0.795750
chr11	72551049	72551919	72551484	ENSG00000276109.1	-	processed_pseudogene	KNOWN	RP11-169D4.3	1	2	0.679731
chr11	72562044	72562554	72562299	ENSG00000274664.1	+	processed_pseudogene	KNOWN	RP11-169D4.4	1	1	0.679731
chr11	72570660	72573229	72571944	ENSG00000227467.3	+	lincRNA	KNOWN	LINC01537	1	2	0.870965
chr11	72576141	72674591	72625366	ENSG00000186642.15	-	protein_coding	KNOWN	PDE2A	27	32	1.088131
chr11	72584572	72587979	72586275	ENSG00000256633.1	+	antisense	KNOWN	RP11-169D4.2	1	2	0.870965
chr11	72615063	72615130	72615096	ENSG00000272036.1	-	miRNA	KNOWN	MIR139	1	1	0.998882
chr11	72621766	72621827	72621796	ENSG00000251919.1	+	snRNA	KNOWN	RNU7-105P	1	1	0.998882
chr11	72643237	72659407	72651322	ENSG00000255808.1	+	antisense	KNOWN	RP11-31L22.3	1	4	1.095775
chr11	72685069	72793599	72739334	ENSG00000186635.14	-	protein_coding	KNOWN	ARAP1	21	35	1.114988
chr11	72685075	72693808	72689441	ENSG00000256007.1	+	antisense	KNOWN	ARAP1-AS1	1	2	1.324936
chr11	72700474	72705607	72703040	ENSG00000245148.2	+	antisense	KNOWN	ARAP1-AS2	1	2	1.461748
chr11	72708186	72708565	72708375	ENSG00000244134.1	+	processed_pseudogene	KNOWN	RPS12P20	1	1	1.461748
chr11	72754729	72794168	72774448	ENSG00000214530.7	-	protein_coding	KNOWN	STARD10	23	8	1.080980
chr11	72766004	72766116	72766060	ENSG00000202522.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.870819
chr11	72783530	72783592	72783561	ENSG00000265064.1	+	miRNA	KNOWN	MIR4692	1	1	1.201002
chr11	72814308	72843674	72828991	ENSG00000168010.10	+	protein_coding	KNOWN	ATG16L2	21	18	0.970800
chr11	72836745	73142261	72989503	ENSG00000137478.14	-	protein_coding	KNOWN	FCHSD2	9	21	0.366388
chr11	72869544	72869650	72869597	ENSG00000206638.1	-	snRNA	KNOWN	RNU6-672P	1	1	0.731948
chr11	72940498	72941112	72940805	ENSG00000234751.1	+	processed_pseudogene	KNOWN	AP002381.2	1	1	0.425548
chr11	73176694	73181696	73179195	ENSG00000256568.1	+	lincRNA	KNOWN	RP11-800A3.3	1	2	0.861764
chr11	73214998	73215913	73215455	ENSG00000215841.3	-	antisense	KNOWN	RP11-800A3.2	1	2	0.787353
chr11	73218298	73236352	73227325	ENSG00000175591.11	+	protein_coding	KNOWN	P2RY2	3	3	0.903133
chr11	73238975	73242335	73240655	ENSG00000260401.1	+	sense_overlapping	KNOWN	RP11-800A3.4	1	1	1.116376
chr11	73248779	73249867	73249323	ENSG00000256347.1	+	unprocessed_pseudogene	KNOWN	OR8R1P	1	2	1.116376
chr11	73264505	73298617	73281561	ENSG00000171631.14	+	protein_coding	KNOWN	P2RY6	12	4	0.979835
chr11	73307235	73309361	73308298	ENSG00000257038.1	-	antisense	KNOWN	RP11-800A3.7	1	3	1.152113
chr11	73308289	73369091	73338690	ENSG00000110237.3	+	protein_coding	KNOWN	ARHGEF17	6	21	1.168309
chr11	73376264	73397474	73386869	ENSG00000054967.12	+	protein_coding	KNOWN	RELT	7	11	1.314337
chr11	73395559	73396436	73395997	ENSG00000256928.1	-	antisense	KNOWN	RP11-809N8.2	1	2	1.359997
chr11	73400487	73598189	73499338	ENSG00000054965.10	-	protein_coding	KNOWN	FAM168A	5	9	0.616680
chr11	73405297	73410682	73407989	ENSG00000256448.5	+	antisense	KNOWN	RP11-809N8.4	2	3	1.314815
chr11	73452020	73452344	73452182	ENSG00000255786.1	+	processed_pseudogene	KNOWN	RP11-809N8.6	1	1	0.683438
chr11	73510658	73510820	73510739	ENSG00000256148.1	+	processed_pseudogene	KNOWN	RP11-809N8.5	1	1	0.393296
chr11	73580253	73580517	73580385	ENSG00000231726.2	+	processed_pseudogene	KNOWN	HMGN2P38	1	1	0.452739
chr11	73640479	73641037	73640758	ENSG00000270323.1	+	processed_pseudogene	KNOWN	AP000860.2	1	1	0.610777
chr11	73646178	73662819	73654498	ENSG00000021300.13	+	protein_coding	KNOWN	PLEKHB1	22	8	0.667387
chr11	73675638	73761137	73718387	ENSG00000175582.19	-	protein_coding	KNOWN	RAB6A	10	8	0.485226
chr11	73722349	73722694	73722521	ENSG00000255928.1	+	antisense	KNOWN	RP11-456I15.2	1	2	0.428355
chr11	73760563	73761070	73760816	ENSG00000256034.1	+	antisense	KNOWN	RP11-707G14.1	1	2	0.737009
chr11	73787316	73865133	73826224	ENSG00000175581.13	+	protein_coding	KNOWN	MRPL48	14	10	0.626509
chr11	73832382	73832690	73832536	ENSG00000199975.1	-	misc_RNA	KNOWN	RN7SKP243	1	1	0.670854
chr11	73850469	73851211	73850840	ENSG00000256681.1	-	processed_pseudogene	KNOWN	CCDC58P5	1	2	0.481203
chr11	73872667	73876988	73874827	ENSG00000181924.6	-	protein_coding	KNOWN	COA4	6	3	0.387977
chr11	73876699	73931124	73903911	ENSG00000175575.12	+	protein_coding	KNOWN	PAAF1	16	13	0.452068
chr11	73921665	73922196	73921930	ENSG00000256898.1	-	processed_pseudogene	KNOWN	RP11-707G14.8	1	1	0.637426
chr11	73950319	73970366	73960342	ENSG00000187726.8	+	protein_coding	KNOWN	DNAJB13	5	8	0.237248
chr11	73963657	73970287	73966972	ENSG00000255847.5	-	antisense	KNOWN	RP11-167N4.2	2	7	0.243708
chr11	73974667	73983307	73978987	ENSG00000175567.8	-	protein_coding	KNOWN	UCP2	10	8	0.489584
chr11	73991283	73992180	73991731	ENSG00000256189.1	-	processed_pseudogene	KNOWN	RP11-167N4.5	1	1	0.478541
chr11	73994972	73996151	73995561	ENSG00000256723.1	-	processed_pseudogene	KNOWN	RP11-167N4.4	1	1	0.478541
chr11	74000281	74009435	74004858	ENSG00000175564.12	-	protein_coding	KNOWN	UCP3	4	7	0.478541
chr11	74012714	74171210	74091962	ENSG00000168014.16	-	protein_coding	KNOWN	C2CD3	20	33	0.377736
chr11	74142151	74142358	74142254	ENSG00000256098.1	+	processed_pseudogene	KNOWN	RP11-691F15.1	1	1	0.356298
chr11	74171099	74254703	74212901	ENSG00000214517.8	+	protein_coding	KNOWN	PPME1	10	14	0.237307
chr11	74198748	74198854	74198801	ENSG00000200649.1	-	rRNA	KNOWN	RNA5SP343	1	1	0.229495
chr11	74204869	74205746	74205307	ENSG00000280269.1	+	TEC	KNOWN	AP000577.2	1	1	0.229495
chr11	74235801	74311657	74273729	ENSG00000149380.11	-	protein_coding	KNOWN	P4HA3	7	16	0.258893
chr11	74252414	74252552	74252483	ENSG00000206913.1	-	snoRNA	NOVEL	SNORA7	1	1	0.475320
chr11	74311362	74324705	74318033	ENSG00000246211.2	+	lincRNA	KNOWN	RP11-632K5.3	1	7	0.210636
chr11	74330318	74398473	74364395	ENSG00000165434.7	-	protein_coding	KNOWN	PGM2L1	2	14	0.224618
chr11	74354443	74355720	74355081	ENSG00000212961.4	+	processed_pseudogene	KNOWN	HNRNPA1P40	1	1	0.353484
chr11	74397549	74485742	74441645	ENSG00000254631.5	+	antisense	KNOWN	RP11-702H23.4	2	4	0.101501
chr11	74399237	74399333	74399285	ENSG00000264402.1	+	miRNA	KNOWN	MIR548AL	1	1	0.116654
chr11	74409060	74416379	74412719	ENSG00000255440.1	+	sense_intronic	KNOWN	RP11-632K5.2	1	2	0.155856
chr11	74454841	74467729	74461285	ENSG00000175538.10	-	protein_coding	KNOWN	KCNE3	6	5	0.171281
chr11	74455348	74456825	74456086	ENSG00000254928.1	+	antisense	KNOWN	RP11-702H23.6	1	2	0.171281
chr11	74482250	74482542	74482396	ENSG00000255444.1	+	processed_pseudogene	KNOWN	CYCSP27	1	1	0.292419
chr11	74485580	74486051	74485815	ENSG00000254974.1	-	processed_pseudogene	KNOWN	RP11-702H23.2	1	1	0.292419
chr11	74491712	74493733	74492722	ENSG00000175536.6	-	protein_coding	KNOWN	LIPT2	3	2	0.013989
chr11	74493366	74498533	74495949	ENSG00000254837.2	+	lincRNA	KNOWN	AP001372.2	2	2	0.013989
chr11	74493851	74669117	74581484	ENSG00000077514.8	+	protein_coding	KNOWN	POLD3	10	12	0.178405
chr11	74652636	74652911	74652773	ENSG00000254500.1	+	processed_pseudogene	KNOWN	RANP3	1	1	0.207469
chr11	74685224	74685505	74685364	ENSG00000223202.1	+	misc_RNA	KNOWN	RN7SKP297	1	1	0.429350
chr11	74696429	74731385	74713907	ENSG00000054938.15	-	protein_coding	KNOWN	CHRDL2	10	12	0.883160
chr11	74698231	74699658	74698944	ENSG00000279353.1	-	TEC	KNOWN	RP11-864N7.4	1	1	0.699207
chr11	74720268	74720337	74720302	ENSG00000265902.1	-	miRNA	KNOWN	MIR4696	1	1	1.032695
chr11	74738478	74738796	74738637	ENSG00000241097.2	-	processed_pseudogene	KNOWN	RP11-864N7.1	1	1	0.526395
chr11	74745716	74746114	74745915	ENSG00000227615.1	-	processed_pseudogene	KNOWN	RP11-864N7.2	1	1	0.526395
chr11	74748868	74842413	74795640	ENSG00000166439.5	+	protein_coding	KNOWN	RNF169	2	6	0.068783
chr11	74753474	74753584	74753529	ENSG00000264095.1	-	miRNA	NOVEL	AP000560.1	1	1	0.228053
chr11	74807739	74949200	74878469	ENSG00000166435.15	-	protein_coding	KNOWN	XRRA1	20	19	0.168991
chr11	74830574	74832510	74831542	ENSG00000278879.1	-	TEC	KNOWN	AP000560.3	1	1	-0.053206
chr11	74845910	74846209	74846059	ENSG00000242999.3	+	misc_RNA	KNOWN	RN7SL239P	1	1	-0.053206
chr11	74876286	74920022	74898154	ENSG00000241170.2	+	transcribed_processed_pseudogene	KNOWN	RP11-147I3.1	5	5	0.202022
chr11	74945981	74946078	74946029	ENSG00000265344.1	-	miRNA	NOVEL	AP001992.1	1	1	0.055280
chr11	74949247	74979031	74964139	ENSG00000118363.11	+	protein_coding	KNOWN	SPCS2	9	6	0.270696
chr11	74968189	74968292	74968240	ENSG00000200152.1	-	snRNA	KNOWN	RNU6-216P	1	1	0.412251
chr11	74988134	75018893	75003513	ENSG00000162139.9	+	protein_coding	KNOWN	NEU3	7	4	0.422677
chr11	75071148	75072052	75071600	ENSG00000234611.1	-	unitary_pseudogene	KNOWN	OR2AT2P	1	1	0.259102
chr11	75079265	75080131	75079698	ENSG00000213333.3	-	processed_pseudogene	KNOWN	NPM1P50	1	1	0.259102
chr11	75088713	75089754	75089233	ENSG00000171561.3	-	protein_coding	KNOWN	OR2AT4	1	1	0.259102
chr11	75099172	75140148	75119660	ENSG00000255395.1	-	antisense	KNOWN	CTD-2562J17.2	1	4	0.126731
chr11	75100563	75206549	75153556	ENSG00000137491.14	+	protein_coding	KNOWN	SLCO2B1	19	14	0.363896
chr11	75131138	75131880	75131509	ENSG00000254475.1	-	unprocessed_pseudogene	KNOWN	OR2AT1P	1	1	0.155070
chr11	75208054	75241173	75224613	ENSG00000255136.2	-	lincRNA	KNOWN	CTD-2562J17.4	3	4	0.588023
chr11	75228322	75228657	75228489	ENSG00000255460.1	-	processed_pseudogene	KNOWN	ZDHHC20P3	1	1	0.654586
chr11	75240905	75243697	75242301	ENSG00000261594.3	+	protein_coding	KNOWN	TPBGL	1	1	0.501383
chr11	75260127	75261025	75260576	ENSG00000254429.1	+	antisense	KNOWN	CTD-2562J17.7	1	2	0.346233
chr11	75260129	75262466	75261297	ENSG00000279117.1	-	TEC	KNOWN	CTD-2562J17.6	1	1	0.346233
chr11	75264182	75351705	75307943	ENSG00000137486.16	-	protein_coding	KNOWN	ARRB1	12	16	0.716560
chr11	75264289	75265170	75264729	ENSG00000254963.1	+	antisense	KNOWN	CTD-2562J17.9	1	2	0.346233
chr11	75335092	75335186	75335139	ENSG00000199090.1	-	miRNA	KNOWN	MIR326	1	1	1.024878
chr11	75399486	75422280	75410883	ENSG00000149273.14	+	protein_coding	KNOWN	RPS3	20	7	0.647790
chr11	75400391	75400538	75400464	ENSG00000206941.1	+	snoRNA	KNOWN	SNORD15A	1	1	0.501104
chr11	75404421	75404566	75404493	ENSG00000207445.1	+	snoRNA	KNOWN	SNORD15B	1	1	0.501104
chr11	75422394	75430629	75426511	ENSG00000149243.15	-	protein_coding	KNOWN	KLHL35	5	6	0.772083
chr11	75434640	75525903	75480271	ENSG00000158555.14	-	protein_coding	KNOWN	GDPD5	17	18	0.907584
chr11	75491459	75491563	75491511	ENSG00000281259.1	+	miRNA	NOVEL	AP002815.1	1	1	0.983739
chr11	75506937	75508391	75507664	ENSG00000254460.1	-	sense_intronic	KNOWN	RP11-939C17.4	1	2	0.983739
chr11	75562056	75572783	75567419	ENSG00000149257.13	+	protein_coding	KNOWN	SERPINH1	15	6	0.877687
chr11	75583196	75594665	75588930	ENSG00000255326.1	+	antisense	KNOWN	CTD-2530H12.4	1	2	0.861520
chr11	75586918	75669120	75628019	ENSG00000171533.11	-	protein_coding	KNOWN	MAP6	4	4	0.548487
chr11	75596144	75597270	75596707	ENSG00000255434.1	-	sense_intronic	KNOWN	CTD-2530H12.8	1	2	0.723749
chr11	75635883	75638587	75637235	ENSG00000254630.1	-	sense_intronic	KNOWN	CTD-2530H12.7	1	2	0.557115
chr11	75642600	75642889	75642744	ENSG00000255280.1	+	processed_pseudogene	KNOWN	CTD-2530H12.5	1	1	0.557115
chr11	75717819	75732958	75725388	ENSG00000166391.14	+	protein_coding	KNOWN	MOGAT2	4	6	0.509354
chr11	75742129	75742426	75742277	ENSG00000263993.2	+	misc_RNA	KNOWN	RN7SL786P	1	1	0.640296
chr11	75742270	75742331	75742300	ENSG00000281528.1	+	miRNA	NOVEL	AP001922.1	1	1	0.640296
chr11	75758455	75768647	75763551	ENSG00000247867.2	-	antisense	KNOWN	CTD-2530H12.1	1	4	0.149136
chr11	75759512	75801535	75780523	ENSG00000062282.14	+	protein_coding	KNOWN	DGAT2	9	8	0.489565
chr11	75775904	75776929	75776416	ENSG00000254826.1	+	sense_intronic	KNOWN	CTD-2530H12.2	1	2	0.490789
chr11	75800877	75803415	75802146	ENSG00000254814.1	-	antisense	KNOWN	RP11-535A19.1	1	3	0.796915
chr11	75803431	75815406	75809418	ENSG00000255507.5	-	antisense	KNOWN	RP11-535A19.2	6	4	0.626188
chr11	75815167	76143195	75979181	ENSG00000198382.8	+	protein_coding	KNOWN	UVRAG	9	15	0.033976
chr11	75835215	75835323	75835269	ENSG00000200256.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.064350
chr11	75837544	75837645	75837594	ENSG00000199362.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.064350
chr11	75911204	75911628	75911416	ENSG00000255255.1	-	processed_pseudogene	KNOWN	PPP1R1AP1	1	1	-0.283517
chr11	75914201	75915213	75914707	ENSG00000255081.1	+	sense_intronic	KNOWN	RP11-263C24.1	1	2	-0.283517
chr11	75934936	75935039	75934987	ENSG00000223013.1	+	rRNA	KNOWN	RNA5SP344	1	1	0.196788
chr11	75942129	75942435	75942282	ENSG00000254915.1	-	processed_pseudogene	KNOWN	RP11-263C24.3	1	1	0.196788
chr11	76137315	76137731	76137523	ENSG00000255421.1	-	antisense	KNOWN	CTD-2011F17.2	1	2	0.404376
chr11	76186325	76210736	76198530	ENSG00000085741.12	-	protein_coding	KNOWN	WNT11	4	6	0.663689
chr11	76190725	76195071	76192898	ENSG00000254933.1	+	antisense	KNOWN	RP11-619A14.2	1	2	0.671829
chr11	76210956	76216025	76213490	ENSG00000255362.1	-	lincRNA	KNOWN	RP11-619A14.3	1	3	0.713480
chr11	76349956	76380971	76365463	ENSG00000137492.7	-	protein_coding	KNOWN	PRKRIR	5	6	0.133955
chr11	76381313	76414619	76397966	ENSG00000179240.9	+	protein_coding	KNOWN	RP11-111M22.2	6	4	0.020981
chr11	76389648	76390128	76389888	ENSG00000272301.1	+	lincRNA	KNOWN	RP11-111M22.4	1	1	0.107301
chr11	76392196	76392905	76392550	ENSG00000271757.1	+	lincRNA	KNOWN	RP11-111M22.5	1	1	-0.053549
chr11	76404140	76404252	76404196	ENSG00000201756.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.053549
chr11	76441338	76444656	76442997	ENSG00000255135.3	-	lincRNA	KNOWN	RP11-111M22.3	2	2	0.099769
chr11	76444923	76553025	76498974	ENSG00000158636.16	+	protein_coding	KNOWN	C11orf30	18	21	-0.026220
chr11	76591023	76591211	76591117	ENSG00000254755.1	+	processed_pseudogene	KNOWN	RP11-672A2.7	1	1	0.630968
chr11	76625462	76626834	76626148	ENSG00000255479.1	-	lincRNA	KNOWN	RP11-672A2.6	1	2	0.602954
chr11	76628096	76630363	76629229	ENSG00000255363.1	-	lincRNA	KNOWN	RP11-672A2.5	1	2	0.617395
chr11	76654169	76656712	76655440	ENSG00000254810.1	-	lincRNA	KNOWN	RP11-672A2.4	1	2	0.484693
chr11	76657056	76663866	76660461	ENSG00000236304.1	+	antisense	KNOWN	AP001189.4	1	3	0.484693
chr11	76657524	76670747	76664135	ENSG00000137507.11	-	protein_coding	KNOWN	LRRC32	5	4	0.493676
chr11	76675079	76703195	76689137	ENSG00000254975.1	+	lincRNA	KNOWN	RP11-672A2.3	1	3	0.570476
chr11	76694043	76707641	76700842	ENSG00000204529.3	-	transcribed_unprocessed_pseudogene	KNOWN	GUCY2EP	2	6	0.487920
chr11	76712396	76719608	76716002	ENSG00000254761.1	-	lincRNA	KNOWN	RP11-672A2.1	1	2	0.772055
chr11	76759916	76768223	76764069	ENSG00000254632.1	-	antisense	KNOWN	RP11-21L23.4	1	2	0.326083
chr11	76782251	76798154	76790202	ENSG00000182704.7	+	protein_coding	KNOWN	TSKU	5	2	0.479731
chr11	76782581	76783062	76782821	ENSG00000255100.1	-	antisense	KNOWN	RP11-21L23.3	3	2	0.353962
chr11	76800364	76804555	76802459	ENSG00000261578.1	+	sense_overlapping	KNOWN	RP11-21L23.2	1	1	0.599223
chr11	76860867	77026797	76943832	ENSG00000078124.11	+	protein_coding	KNOWN	ACER3	14	13	0.087383
chr11	76878232	76878318	76878275	ENSG00000212030.1	+	miRNA	NOVEL	AP002498.1	1	1	0.002724
chr11	76955417	76978619	76967018	ENSG00000254988.1	-	antisense	KNOWN	CTD-2547H18.1	1	3	0.339156
chr11	77034398	77041973	77038185	ENSG00000198488.10	+	protein_coding	KNOWN	B3GNT6	2	3	0.311670
chr11	77066932	77126155	77096543	ENSG00000149260.14	+	protein_coding	KNOWN	CAPN5	8	15	0.760757
chr11	77102840	77103331	77103085	ENSG00000254550.1	+	protein_coding	KNOWN	OMP	1	1	0.898141
chr11	77128264	77215239	77171751	ENSG00000137474.19	+	protein_coding	KNOWN	MYO7A	11	50	0.779038
chr11	77216558	77301687	77259122	ENSG00000178795.9	-	protein_coding	KNOWN	GDPD4	6	17	0.336023
chr11	77313606	77314032	77313819	ENSG00000224829.3	+	processed_pseudogene	KNOWN	TOMM20P1	1	1	0.083724
chr11	77321707	77474635	77398171	ENSG00000149269.9	-	protein_coding	KNOWN	PAK1	20	16	0.137057
chr11	77473371	77477030	77475200	ENSG00000268635.2	+	antisense	KNOWN	RP11-739B23.1	1	1	-0.174288
chr11	77514936	77637805	77576370	ENSG00000074201.8	-	protein_coding	KNOWN	CLNS1A	12	7	0.250328
chr11	77566934	77566994	77566964	ENSG00000238880.1	-	snRNA	KNOWN	RNU7-59P	1	1	0.430794
chr11	77589391	77610355	77599873	ENSG00000178301.3	+	protein_coding	KNOWN	AQP11	2	4	0.372113
chr11	77659996	77821017	77740506	ENSG00000048649.13	-	protein_coding	KNOWN	RSF1	12	16	0.228252
chr11	77691650	77691751	77691700	ENSG00000206816.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.243995
chr11	77717712	77718411	77718061	ENSG00000254985.1	-	sense_intronic	KNOWN	RSF1-IT2	1	2	-0.078994
chr11	77734475	77735026	77734750	ENSG00000227376.1	-	processed_pseudogene	KNOWN	FTH1P16	1	1	0.300745
chr11	77738680	77739568	77739124	ENSG00000255409.1	-	sense_intronic	KNOWN	RSF1-IT1	1	2	0.300745
chr11	77813319	77813676	77813497	ENSG00000219529.2	-	processed_pseudogene	KNOWN	AP000580.1	1	1	0.336844
chr11	77821109	77918432	77869770	ENSG00000087884.14	+	protein_coding	KNOWN	AAMDC	12	7	0.268872
chr11	77829654	77872262	77850958	ENSG00000254459.1	-	antisense	KNOWN	RP11-91P24.7	1	2	0.190896
chr11	77850604	77851511	77851057	ENSG00000254691.1	+	antisense	KNOWN	RP11-91P24.5	1	2	0.254263
chr11	77866412	77870091	77868251	ENSG00000255449.1	-	antisense	KNOWN	RP11-91P24.6	1	2	0.256620
chr11	77868722	77869195	77868958	ENSG00000241782.1	-	processed_pseudogene	KNOWN	RP11-91P24.1	1	1	0.254263
chr11	77878720	77994678	77936699	ENSG00000149262.16	-	protein_coding	KNOWN	INTS4	11	24	0.207812
chr11	77914990	77915275	77915132	ENSG00000255115.2	-	processed_pseudogene	KNOWN	RP11-91P24.3	1	1	0.355026
chr11	78015715	78046191	78030953	ENSG00000151364.16	-	protein_coding	KNOWN	KCTD14	2	3	0.515550
chr11	78015715	78016495	78016105	ENSG00000254829.1	+	antisense	KNOWN	RP11-7I15.3	1	2	0.242409
chr11	78016971	78079865	78048418	ENSG00000259112.2	-	protein_coding	KNOWN	NDUFC2-KCTD14	4	4	0.605399
chr11	78022933	78023721	78023327	ENSG00000254675.1	+	antisense	KNOWN	RP11-7I15.4	1	2	0.242409
chr11	78063861	78068351	78066106	ENSG00000151365.2	+	protein_coding	KNOWN	THRSP	1	2	0.813589
chr11	78068304	78080219	78074261	ENSG00000151366.12	-	protein_coding	KNOWN	NDUFC2	5	3	0.421412
chr11	78100936	78139660	78120298	ENSG00000159063.12	-	protein_coding	KNOWN	ALG8	21	14	0.408330
chr11	78133420	78133522	78133471	ENSG00000252494.1	-	snRNA	KNOWN	RNU6-126P	1	1	0.318907
chr11	78139771	78175323	78157547	ENSG00000246174.7	+	antisense	KNOWN	KCTD21-AS1	7	4	0.387385
chr11	78171249	78188822	78180035	ENSG00000188997.7	-	protein_coding	KNOWN	KCTD21	6	4	0.505188
chr11	78188812	78214711	78201761	ENSG00000118369.12	+	protein_coding	KNOWN	USP35	7	11	0.829977
chr11	78215297	78418348	78316822	ENSG00000033327.12	-	protein_coding	KNOWN	GAB2	7	10	0.306186
chr11	78324758	78444049	78384403	ENSG00000254420.1	+	antisense	KNOWN	RP11-452H21.1	1	2	0.228226
chr11	78388061	78392405	78390233	ENSG00000254649.1	+	antisense	KNOWN	RP11-452H21.2	1	2	0.309005
chr11	78423982	78429836	78426909	ENSG00000251323.2	-	lincRNA	KNOWN	RP11-452H21.4	1	4	0.324653
chr11	78435961	78574874	78505417	ENSG00000137513.9	-	protein_coding	KNOWN	NARS2	7	14	0.174589
chr11	78533176	78558565	78545870	ENSG00000255084.1	+	antisense	KNOWN	RP11-843A23.1	1	4	0.205468
chr11	78579255	78579356	78579305	ENSG00000252033.1	-	snRNA	KNOWN	RNU6-311P	1	1	0.252032
chr11	78581675	78582156	78581915	ENSG00000254697.1	+	processed_pseudogene	KNOWN	COPS8P3	1	1	0.252032
chr11	78652831	79440948	79046889	ENSG00000149256.14	-	protein_coding	KNOWN	TENM4	12	34	0.292564
chr11	78749250	78756480	78752865	ENSG00000254563.1	+	antisense	KNOWN	RP11-673F18.1	1	2	0.563032
chr11	78973721	78973809	78973765	ENSG00000266550.1	-	miRNA	NOVEL	AP002958.1	1	1	0.372100
chr11	79092848	79098003	79095425	ENSG00000255345.1	+	lincRNA	KNOWN	CTD-2337I7.1	3	4	0.205450
chr11	79191558	79193160	79192359	ENSG00000254885.1	+	lincRNA	KNOWN	RP11-802F5.1	1	2	0.360640
chr11	79402022	79402109	79402065	ENSG00000211997.1	-	miRNA	KNOWN	MIR708	1	1	0.350304
chr11	79422169	79422226	79422197	ENSG00000266570.1	-	miRNA	KNOWN	MIR5579	1	1	0.185101
chr11	79604967	79612300	79608633	ENSG00000255209.1	-	lincRNA	KNOWN	RP11-258O13.1	1	2	-0.152010
chr11	79692379	79692529	79692454	ENSG00000221551.1	+	miRNA	NOVEL	AP000478.1	1	1	-0.461028
chr11	79966805	79968708	79967756	ENSG00000279295.1	+	TEC	KNOWN	RP11-683O4.1	1	1	-0.257754
chr11	79987513	79989630	79988571	ENSG00000254471.1	+	processed_pseudogene	KNOWN	RP11-885L14.1	1	1	-0.104073
chr11	80321620	80327911	80324765	ENSG00000254434.1	-	lincRNA	KNOWN	CTD-2555I5.1	1	2	-0.473288
chr11	80527960	80528066	80528013	ENSG00000200146.1	+	snRNA	KNOWN	RNU6-544P	1	1	-0.511491
chr11	80653429	80653988	80653708	ENSG00000255014.1	-	processed_pseudogene	KNOWN	ARL6IP1P3	1	1	-0.781316
chr11	80751200	80762826	80757013	ENSG00000255178.1	-	lincRNA	KNOWN	RP11-686G23.2	1	3	-0.518506
chr11	80957317	80957634	80957475	ENSG00000254437.1	+	processed_pseudogene	KNOWN	RP11-170L9.1	1	1	-0.680598
chr11	81122519	81122586	81122552	ENSG00000277854.1	-	miRNA	NOVEL	AP003464.1	1	1	-0.555127
chr11	81552226	81552516	81552371	ENSG00000254747.1	+	processed_pseudogene	KNOWN	MTND4LP18	1	1	-0.542491
chr11	81555910	81556425	81556167	ENSG00000255316.1	-	unprocessed_pseudogene	KNOWN	MTND6P25	1	1	-0.542491
chr11	81806571	81806635	81806603	ENSG00000275554.1	-	miRNA	NOVEL	AP002802.1	1	1	-0.480371
chr11	81842435	81842669	81842552	ENSG00000270701.1	-	processed_pseudogene	KNOWN	RP11-876F14.2	1	1	-0.771272
chr11	81879851	82718082	82298966	ENSG00000245832.6	-	lincRNA	KNOWN	MIR4300HG	3	8	-0.388189
chr11	81890741	81890836	81890788	ENSG00000264110.1	-	miRNA	KNOWN	MIR4300	1	1	-0.507185
chr11	81970994	81987813	81979403	ENSG00000254511.1	+	lincRNA	KNOWN	RP11-876F14.1	1	2	-0.788427
chr11	82603743	82643419	82623581	ENSG00000255246.1	-	lincRNA	KNOWN	RP11-179A16.2	1	4	-0.381264
chr11	82689559	82689768	82689663	ENSG00000227097.5	+	processed_pseudogene	KNOWN	RPS28P7	1	1	-0.547418
chr11	82729941	82733864	82731902	ENSG00000182103.4	-	protein_coding	KNOWN	FAM181B	1	1	-0.069222
chr11	82791662	82817146	82804404	ENSG00000255382.1	+	lincRNA	KNOWN	RP11-718B12.2	1	2	-0.131044
chr11	82805354	82806509	82805931	ENSG00000255063.1	+	processed_pseudogene	KNOWN	RP11-718B12.1	1	1	-0.175781
chr11	82823502	82970584	82897043	ENSG00000137509.10	-	protein_coding	KNOWN	PRCP	19	10	-0.035188
chr11	82835509	82837222	82836365	ENSG00000254441.1	+	processed_pseudogene	KNOWN	RP11-718B12.5	1	4	-0.266269
chr11	82899975	82958277	82929126	ENSG00000165490.12	+	protein_coding	KNOWN	DDIAS	12	8	0.170571
chr11	82957423	82958216	82957819	ENSG00000242279.1	+	processed_pseudogene	KNOWN	RP11-659G9.1	1	1	0.337644
chr11	82963681	83039115	83001398	ENSG00000254698.1	-	sense_overlapping	KNOWN	RP11-659G9.3	1	2	0.274635
chr11	82973133	83071923	83022528	ENSG00000137502.9	-	protein_coding	KNOWN	RAB30	16	6	0.313915
chr11	83040806	83041403	83041104	ENSG00000254522.1	-	processed_pseudogene	KNOWN	RP11-113K21.1	1	2	0.502703
chr11	83041464	83041598	83041531	ENSG00000207221.1	-	snoRNA	KNOWN	SNORA70E	1	1	0.502703
chr11	83072066	83106719	83089392	ENSG00000246067.7	+	lincRNA	KNOWN	RAB30-AS1	8	4	0.412842
chr11	83072402	83097196	83084799	ENSG00000255503.1	-	lincRNA	KNOWN	RP11-113K21.4	1	3	0.392539
chr11	83083687	83084138	83083912	ENSG00000279900.1	+	TEC	KNOWN	RP11-113K21.6	1	1	0.361880
chr11	83106580	83106961	83106770	ENSG00000255010.1	-	processed_pseudogene	KNOWN	RP11-113K21.3	1	1	0.467501
chr11	83111060	83111442	83111251	ENSG00000254965.1	-	processed_pseudogene	KNOWN	C1DP5	1	1	0.031556
chr11	83132056	83134737	83133396	ENSG00000255051.1	+	processed_pseudogene	KNOWN	BCAS2P1	1	4	0.428641
chr11	83156988	83187451	83172219	ENSG00000165494.10	+	protein_coding	KNOWN	PCF11	8	16	0.329065
chr11	83180144	83184520	83182332	ENSG00000254676.1	+	sense_overlapping	KNOWN	RP11-727A23.4	1	2	0.319593
chr11	83184491	83193794	83189142	ENSG00000247137.8	-	processed_transcript	KNOWN	RP11-727A23.5	9	4	0.233631
chr11	83185521	83187036	83186278	ENSG00000269939.1	-	lincRNA	KNOWN	RP11-727A23.11	1	1	0.319593
chr11	83193739	83260694	83227216	ENSG00000137494.13	+	protein_coding	KNOWN	ANKRD42	9	12	0.042823
chr11	83209399	83209634	83209516	ENSG00000255541.1	+	processed_pseudogene	KNOWN	RP11-727A23.8	1	1	0.108866
chr11	83209431	83213379	83211405	ENSG00000254551.1	-	antisense	KNOWN	RP11-727A23.7	1	2	0.248210
chr11	83213005	83213404	83213204	ENSG00000241020.1	+	processed_pseudogene	KNOWN	RP11-727A23.1	1	1	0.271626
chr11	83259097	83286407	83272752	ENSG00000137500.9	-	protein_coding	KNOWN	CCDC90B	19	9	0.027972
chr11	83286128	83423516	83354822	ENSG00000255234.5	+	antisense	KNOWN	RP11-727A23.10	2	5	-0.094975
chr11	83328926	83329246	83329086	ENSG00000255003.1	+	processed_pseudogene	KNOWN	CYCSP28	1	1	0.173063
chr11	83386988	83387102	83387045	ENSG00000274004.1	+	misc_RNA	NOVEL	H19_3	1	1	-0.273005
chr11	83455012	85627922	84541467	ENSG00000150672.16	-	protein_coding	KNOWN	DLG2	30	28	-0.380082
chr11	83643602	83725390	83684496	ENSG00000255311.5	+	antisense	KNOWN	RP11-160H12.2	4	8	-0.275155
chr11	83789977	83791578	83790777	ENSG00000254629.1	-	processed_pseudogene	KNOWN	RP11-160H12.3	1	1	-0.145436
chr11	83814571	83815263	83814917	ENSG00000250257.1	-	unprocessed_pseudogene	KNOWN	LDHAL6DP	1	1	-0.043785
chr11	84229560	84229649	84229604	ENSG00000264838.1	+	miRNA	NOVEL	AP003305.1	1	1	-0.284572
chr11	84545131	84546846	84545988	ENSG00000254713.2	-	processed_pseudogene	KNOWN	HNRNPA1P72	1	2	-0.690417
chr11	84639993	84640565	84640279	ENSG00000240174.1	+	processed_pseudogene	KNOWN	RP11-851M3.1	1	1	-0.293662
chr11	84720826	84800701	84760763	ENSG00000254787.1	+	antisense	KNOWN	CTD-2537O9.1	1	4	-0.330279
chr11	84887207	84887419	84887313	ENSG00000274006.1	+	misc_RNA	NOVEL	DLG2-AS1_1	1	1	-0.198458
chr11	84890744	84890961	84890852	ENSG00000276179.1	+	misc_RNA	NOVEL	DLG2-AS1_2	1	1	-0.545438
chr11	84936689	84955705	84946197	ENSG00000255555.1	+	antisense	KNOWN	AP000857.3	1	2	-0.443346
chr11	84997226	84997768	84997497	ENSG00000255396.2	-	processed_pseudogene	KNOWN	AP000857.2	1	1	-0.320203
chr11	85020785	85021655	85021220	ENSG00000213305.3	-	processed_pseudogene	KNOWN	HNRNPCP6	1	1	-0.777114
chr11	85336075	85336572	85336323	ENSG00000254684.1	-	processed_pseudogene	KNOWN	RP11-882I15.1	1	1	-0.159070
chr11	85452282	85453698	85452990	ENSG00000254897.1	-	processed_pseudogene	KNOWN	RP11-482L11.1	1	1	-0.505682
chr11	85509938	85510044	85509991	ENSG00000206583.1	+	snRNA	KNOWN	RNU6-1292P	1	1	-0.317056
chr11	85628573	85636539	85632556	ENSG00000171204.12	+	protein_coding	KNOWN	TMEM126B	11	6	-0.113099
chr11	85647967	85656547	85652257	ENSG00000171202.6	+	protein_coding	KNOWN	TMEM126A	6	5	-0.070002
chr11	85659708	85682908	85671308	ENSG00000137504.13	-	protein_coding	KNOWN	CREBZF	9	5	-0.013953
chr11	85684866	85686277	85685571	ENSG00000179071.4	-	protein_coding	KNOWN	CCDC89	1	1	0.028266
chr11	85694224	85811159	85752691	ENSG00000137501.17	-	protein_coding	KNOWN	SYTL2	30	19	0.209963
chr11	85852557	85854943	85853750	ENSG00000279742.1	-	TEC	KNOWN	RP11-700A24.1	1	1	0.268870
chr11	85855101	85920021	85887561	ENSG00000150676.12	+	protein_coding	KNOWN	CCDC83	4	12	0.162070
chr11	85916502	85923682	85920092	ENSG00000255005.1	-	antisense	KNOWN	RP11-90K17.2	1	4	0.294036
chr11	85934737	85935663	85935200	ENSG00000254479.1	+	processed_pseudogene	KNOWN	SLC25A1P1	1	1	0.274470
chr11	85957684	86069882	86013783	ENSG00000073921.17	-	protein_coding	KNOWN	PICALM	24	20	0.145632
chr11	86153227	86153334	86153280	ENSG00000200877.1	+	snRNA	KNOWN	RNU6-560P	1	1	0.203560
chr11	86192787	86193482	86193134	ENSG00000254699.1	-	lincRNA	KNOWN	RP11-12D16.2	1	2	0.180348
chr11	86195132	86196266	86195699	ENSG00000254502.1	+	processed_pseudogene	KNOWN	FNTAL1	1	1	0.180348
chr11	86216596	86216878	86216737	ENSG00000276669.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.383041
chr11	86244544	86278813	86261678	ENSG00000074266.17	+	protein_coding	KNOWN	EED	11	13	-0.053326
chr11	86278333	86278398	86278365	ENSG00000273630.1	+	miRNA	KNOWN	MIR6755	1	1	-0.032704
chr11	86283927	86284668	86284297	ENSG00000254783.1	+	processed_pseudogene	KNOWN	RP11-320L11.2	1	1	-0.032704
chr11	86294760	86295576	86295168	ENSG00000255222.1	+	processed_pseudogene	KNOWN	SETP17	1	1	0.116654
chr11	86302211	86345931	86324071	ENSG00000149196.15	+	protein_coding	KNOWN	C11orf73	8	6	0.250305
chr11	86324012	86324309	86324160	ENSG00000239856.3	-	misc_RNA	KNOWN	RN7SL225P	1	1	0.195943
chr11	86374736	86423109	86398922	ENSG00000149201.9	+	protein_coding	KNOWN	CCDC81	10	15	0.096296
chr11	86431590	86622867	86527228	ENSG00000254733.1	+	antisense	KNOWN	RP11-317J19.1	1	3	0.217917
chr11	86432098	86432575	86432336	ENSG00000254727.1	+	transcribed_processed_pseudogene	KNOWN	PTP4A1P6	1	1	-0.065248
chr11	86434924	86437282	86436103	ENSG00000278989.1	-	TEC	KNOWN	RP11-762L8.6	1	1	-0.065248
chr11	86441108	86672636	86556872	ENSG00000151376.16	-	protein_coding	KNOWN	ME3	12	15	0.248702
chr11	86703099	86714092	86708595	ENSG00000254731.1	+	lincRNA	KNOWN	CTD-2005H7.1	1	2	0.184539
chr11	86727355	86765265	86746310	ENSG00000255250.1	+	lincRNA	KNOWN	CTD-2005H7.2	1	5	0.386154
chr11	86791059	86952910	86871984	ENSG00000150687.11	+	protein_coding	KNOWN	PRSS23	9	5	0.247645
chr11	86821143	86821728	86821435	ENSG00000271318.1	-	processed_pseudogene	KNOWN	AP000654.5	1	1	0.300100
chr11	86832540	86833449	86832994	ENSG00000197882.3	-	unprocessed_pseudogene	KNOWN	OR7E13P	1	1	0.085005
chr11	86833068	86837615	86835341	ENSG00000269895.1	+	lincRNA	KNOWN	AP000654.4	1	2	0.085005
chr11	86857059	86857947	86857503	ENSG00000255203.1	-	unprocessed_pseudogene	KNOWN	OR7E2P	1	1	0.346806
chr11	86892214	86925037	86908625	ENSG00000255471.1	-	antisense	KNOWN	RP11-736K20.5	2	3	0.224579
chr11	86908990	86912238	86910614	ENSG00000280339.1	-	TEC	KNOWN	RP11-736K20.4	1	1	0.177962
chr11	86945679	86955391	86950535	ENSG00000174804.3	-	protein_coding	KNOWN	FZD4	1	2	0.182289
chr11	86955619	87000959	86978289	ENSG00000246523.7	+	lincRNA	KNOWN	RP11-736K20.6	2	3	0.213401
chr11	87024583	87025777	87025180	ENSG00000254748.1	+	processed_pseudogene	KNOWN	HNRNPCP8	1	2	-0.208668
chr11	87037844	87323758	87180801	ENSG00000166575.16	+	protein_coding	KNOWN	TMEM135	9	15	-0.180153
chr11	87089014	87089120	87089067	ENSG00000277121.1	+	miRNA	NOVEL	AP002967.1	1	1	-0.022872
chr11	87094734	87096585	87095659	ENSG00000254843.1	-	processed_pseudogene	KNOWN	RP11-648O15.1	1	1	-0.184526
chr11	87121058	87121596	87121327	ENSG00000279836.1	+	TEC	KNOWN	RP11-648O15.2	1	1	-0.364724
chr11	87258851	87259259	87259055	ENSG00000213287.3	-	processed_pseudogene	KNOWN	RP11-680L20.1	1	1	-0.148142
chr11	87323709	87324359	87324034	ENSG00000270510.1	-	processed_pseudogene	KNOWN	RP11-777F6.3	1	1	-0.420070
chr11	87329407	87330052	87329729	ENSG00000254582.1	-	processed_pseudogene	KNOWN	PSMA2P1	1	1	-0.400908
chr11	87480736	87481297	87481016	ENSG00000255391.1	-	processed_pseudogene	KNOWN	CTD-2028E8.1	1	1	0.013518
chr11	87490144	87491110	87490627	ENSG00000279701.1	+	TEC	KNOWN	CTD-2028E8.2	1	1	-0.178097
chr11	87565994	87566421	87566207	ENSG00000278929.1	+	TEC	KNOWN	RP11-137O10.1	1	1	-0.438523
chr11	87606783	87606885	87606834	ENSG00000223015.1	+	snRNA	KNOWN	RNU6-1135P	1	1	-0.370535
chr11	87718354	87719411	87718882	ENSG00000255183.1	-	lincRNA	KNOWN	RP11-720D4.3	1	2	-0.188745
chr11	87718667	87721233	87719950	ENSG00000279341.1	-	TEC	KNOWN	RP11-720D4.2	1	1	-0.188745
chr11	87815035	87816157	87815596	ENSG00000254650.1	-	processed_pseudogene	KNOWN	RP11-665E10.5	1	1	-0.492971
chr11	87816224	87816524	87816374	ENSG00000255022.1	+	processed_pseudogene	KNOWN	RP11-665E10.1	1	1	-0.492971
chr11	87816999	87817567	87817283	ENSG00000279793.1	+	TEC	KNOWN	RP11-665E10.2	1	1	-0.492971
chr11	87879473	87880095	87879784	ENSG00000280307.1	-	TEC	KNOWN	RP11-665E10.4	1	1	-0.790651
chr11	87917948	87917999	87917973	ENSG00000254794.1	-	processed_pseudogene	KNOWN	RP11-665E10.3	1	1	-0.694834
chr11	88050106	88062110	88056108	ENSG00000255516.1	+	lincRNA	KNOWN	RP11-164N3.1	1	3	-0.470944
chr11	88061774	88098147	88079960	ENSG00000255102.1	-	lincRNA	KNOWN	RP11-164N3.2	1	2	-0.422813
chr11	88098591	88115835	88107213	ENSG00000255241.1	+	antisense	KNOWN	RP11-164N3.3	1	3	-0.474014
chr11	88099995	88100105	88100050	ENSG00000206690.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.437476
chr11	88113242	88175467	88144354	ENSG00000123892.11	-	protein_coding	KNOWN	RAB38	3	3	-0.423746
chr11	88131569	88131657	88131613	ENSG00000277712.1	+	rRNA	NOVEL	5S_rRNA	1	1	-0.450705
chr11	88165575	88167691	88166633	ENSG00000279733.1	-	TEC	KNOWN	RP11-685B24.1	1	1	-0.338643
chr11	88176502	88176593	88176547	ENSG00000266581.1	+	miRNA	KNOWN	MIR3166	1	1	-0.263489
chr11	88293592	88337787	88315689	ENSG00000109861.15	-	protein_coding	KNOWN	CTSC	9	7	-0.100522
chr11	88408179	88409223	88408701	ENSG00000249489.1	-	processed_pseudogene	KNOWN	GAPDHP70	1	1	-0.113869
chr11	88504576	89065945	88785260	ENSG00000168959.14	-	protein_coding	KNOWN	GRM5	5	9	-0.472891
chr11	88504576	88524054	88514315	ENSG00000255082.1	+	antisense	KNOWN	GRM5-AS1	2	6	-0.197191
chr11	88612805	88612911	88612858	ENSG00000207113.1	-	snRNA	KNOWN	RNU6-16P	1	1	-0.336851
chr11	89112710	89112824	89112767	ENSG00000221130.1	+	miRNA	NOVEL	AP001482.1	1	1	-0.208241
chr11	89177452	89295759	89236605	ENSG00000077498.8	+	protein_coding	KNOWN	TYR	3	5	-0.436554
chr11	89293745	89294246	89293995	ENSG00000197692.5	-	processed_pseudogene	KNOWN	CBX3P7	1	1	-0.257754
chr11	89297717	89298199	89297958	ENSG00000279297.1	+	TEC	KNOWN	RP11-796A5.3	1	1	-0.257754
chr11	89300709	89301477	89301093	ENSG00000279603.1	-	TEC	KNOWN	RP11-796A5.4	1	1	-0.257754
chr11	89324356	89498187	89411271	ENSG00000086991.12	-	protein_coding	KNOWN	NOX4	15	19	-0.262333
chr11	89498748	89499198	89498973	ENSG00000255295.1	-	processed_pseudogene	KNOWN	RP11-745I13.1	1	1	-0.445665
chr11	89533645	89534043	89533844	ENSG00000279248.1	-	TEC	KNOWN	RP11-643G5.1	1	1	0.020290
chr11	89545128	89545744	89545436	ENSG00000279697.1	+	TEC	KNOWN	RP11-643G5.2	1	1	0.020290
chr11	89546637	89589611	89568124	ENSG00000255429.1	-	lincRNA	KNOWN	RP11-643G5.6	1	2	-0.267073
chr11	89548130	89548795	89548462	ENSG00000279045.1	-	TEC	KNOWN	RP11-643G5.7	1	1	0.020290
chr11	89556860	89557205	89557032	ENSG00000279056.1	+	TEC	KNOWN	RP11-643G5.4	1	1	-0.216958
chr11	89576913	89577652	89577282	ENSG00000280201.1	+	TEC	KNOWN	RP11-643G5.5	1	1	-0.367440
chr11	89639227	89698718	89668972	ENSG00000134612.11	+	transcribed_unprocessed_pseudogene	KNOWN	FOLH1B	2	18	-0.495365
chr11	89700764	89701325	89701044	ENSG00000255385.1	+	processed_pseudogene	KNOWN	UBTFL10	1	1	-0.506646
chr11	89704164	89704658	89704411	ENSG00000279163.1	+	TEC	KNOWN	RP11-313I2.3	1	1	-0.506646
chr11	89710299	89717872	89714085	ENSG00000214414.9	+	protein_coding	KNOWN	TRIM77	2	6	-0.291712
chr11	89723482	89727253	89725367	ENSG00000255486.1	-	unprocessed_pseudogene	KNOWN	RP11-313I2.13	1	2	-0.291712
chr11	89731017	89734782	89732899	ENSG00000255540.1	+	processed_pseudogene	KNOWN	RP11-313I2.5	1	1	-0.457924
chr11	89752785	89753975	89753380	ENSG00000234376.4	-	processed_pseudogene	KNOWN	UBTFL2	1	1	0.014587
chr11	89753982	89754953	89754467	ENSG00000254971.1	-	lincRNA	KNOWN	RP11-313I2.11	1	2	0.014587
chr11	89764884	89765138	89765011	ENSG00000255170.2	+	processed_pseudogene	KNOWN	RP11-313I2.6	1	1	0.014587
chr11	89766440	89768836	89767638	ENSG00000204456.4	-	unprocessed_pseudogene	KNOWN	RP11-313I2.10	1	3	0.014587
chr11	89776981	89782377	89779679	ENSG00000254751.2	+	transcribed_unprocessed_pseudogene	KNOWN	TRIM64DP	1	5	-0.176204
chr11	89785945	89787838	89786891	ENSG00000255162.1	+	unprocessed_pseudogene	KNOWN	RP11-358N4.3	1	2	-0.176204
chr11	89789412	89789733	89789572	ENSG00000255285.1	-	processed_pseudogene	KNOWN	RP11-358N4.5	1	1	-0.176204
chr11	89797655	89808575	89803115	ENSG00000168930.13	-	protein_coding	KNOWN	TRIM49	2	8	-0.210278
chr11	89820082	89826922	89823502	ENSG00000250946.2	+	unprocessed_pseudogene	KNOWN	RP11-358N4.6	1	6	-0.492971
chr11	89841997	89850970	89846483	ENSG00000166013.11	+	unprocessed_pseudogene	KNOWN	TRIM53BP	1	5	-0.425033
chr11	89854953	89862893	89858923	ENSG00000204455.7	+	unprocessed_pseudogene	KNOWN	TRIM51BP	1	6	-0.453442
chr11	89863848	89865550	89864699	ENSG00000254558.1	-	unprocessed_pseudogene	KNOWN	RP11-81M19.3	1	2	-0.453442
chr11	89869282	89876017	89872649	ENSG00000189253.7	-	protein_coding	KNOWN	TRIM64B	1	6	-0.320436
chr11	89883927	89886213	89885070	ENSG00000255235.1	-	unprocessed_pseudogene	KNOWN	RP11-313I2.8	1	2	-0.304589
chr11	89887366	89889991	89888678	ENSG00000254617.1	+	unprocessed_pseudogene	KNOWN	AP000648.3	1	4	-0.304589
chr11	89895799	89900449	89898124	ENSG00000254785.1	-	unprocessed_pseudogene	KNOWN	RP11-81M19.1	1	2	-0.446874
chr11	89908540	89909047	89908793	ENSG00000255055.1	+	processed_pseudogene	KNOWN	MTND1P35	1	1	-0.446874
chr11	89911111	89921767	89916439	ENSG00000223417.8	-	protein_coding	KNOWN	TRIM49D1	3	8	-0.446601
chr11	89924064	89933063	89928563	ENSG00000233802.8	+	protein_coding	KNOWN	TRIM49D2	2	7	-0.510830
chr11	89944035	89949402	89946718	ENSG00000254818.1	+	unprocessed_pseudogene	KNOWN	RP11-529A4.4	1	2	-0.635242
chr11	89954593	89954908	89954750	ENSG00000278837.1	-	processed_pseudogene	KNOWN	RP11-529A4.16	1	1	-0.175941
chr11	89955146	89957165	89956155	ENSG00000255360.1	-	unprocessed_pseudogene	KNOWN	RP11-529A4.15	1	3	-0.175941
chr11	89960422	89960624	89960523	ENSG00000254655.1	+	processed_pseudogene	KNOWN	RP11-529A4.5	1	1	-0.175941
chr11	89968502	89975228	89971865	ENSG00000204450.7	+	protein_coding	KNOWN	TRIM64	1	6	-0.339762
chr11	89978540	89980661	89979600	ENSG00000255305.1	+	unprocessed_pseudogene	KNOWN	RP11-529A4.7	1	2	-0.386662
chr11	89981441	89989559	89985500	ENSG00000237706.4	-	unprocessed_pseudogene	KNOWN	TRIM51EP	1	6	-0.386662
chr11	89993536	89999741	89996638	ENSG00000225581.3	-	unprocessed_pseudogene	KNOWN	TRIM53AP	1	6	-0.207568
chr11	90017611	90024511	90021061	ENSG00000255184.1	-	unprocessed_pseudogene	KNOWN	RP11-313I2.7	1	5	-0.453832
chr11	90031106	90042025	90036565	ENSG00000204449.3	+	protein_coding	KNOWN	TRIM49C	1	8	-0.483123
chr11	90049945	90050266	90050105	ENSG00000254803.1	+	processed_pseudogene	KNOWN	RP11-529A4.9	1	1	-0.349975
chr11	90051837	90053736	90052786	ENSG00000254916.1	-	unprocessed_pseudogene	KNOWN	RP11-529A4.12	1	2	-0.323046
chr11	90057605	90062999	90060302	ENSG00000223709.5	-	unprocessed_pseudogene	KNOWN	TRIM64EP	1	5	-0.323046
chr11	90071136	90073055	90072095	ENSG00000255011.1	+	unprocessed_pseudogene	KNOWN	RP11-529A4.10	1	3	-0.188686
chr11	90074839	90075096	90074967	ENSG00000254888.2	-	processed_pseudogene	KNOWN	RP11-716D19.1	1	1	-0.188686
chr11	90085950	90087131	90086540	ENSG00000255009.4	+	protein_coding	KNOWN	UBTFL1	1	1	-0.188686
chr11	90098421	90098817	90098619	ENSG00000254436.1	-	processed_pseudogene	KNOWN	AP000648.6	1	1	-0.271515
chr11	90118391	90118461	90118426	ENSG00000207299.1	+	snoRNA	NOVEL	SNORD56	1	1	-0.299330
chr11	90125658	90126061	90125859	ENSG00000279299.1	+	TEC	KNOWN	AP000648.4	1	1	-0.299330
chr11	90131515	90192894	90162204	ENSG00000077616.10	+	protein_coding	KNOWN	NAALAD2	10	19	-0.538289
chr11	90193614	90198120	90195867	ENSG00000280385.1	+	TEC	KNOWN	AP000648.5	1	1	-0.466881
chr11	90201160	90223364	90212262	ENSG00000110172.11	-	protein_coding	KNOWN	CHORDC1	11	12	-0.426540
chr11	90223153	90226538	90224845	ENSG00000280367.1	+	TEC	KNOWN	RP11-121L10.2	1	1	-0.399861
chr11	90251232	90915052	90583142	ENSG00000261645.5	+	processed_transcript	KNOWN	DISC1FP1	5	7	-0.580680
chr11	90282560	90284172	90283366	ENSG00000214391.3	+	processed_pseudogene	KNOWN	TUBAP2	1	1	-0.501238
chr11	90324776	90324884	90324830	ENSG00000223101.1	+	miRNA	NOVEL	AP002364.1	1	1	-0.206232
chr11	90555774	90555857	90555815	ENSG00000266703.1	-	miRNA	KNOWN	MIR4490	1	1	-0.349277
chr11	90731110	90731723	90731416	ENSG00000280430.1	+	TEC	KNOWN	RP11-660M18.1	1	1	-0.815979
chr11	90869121	90869202	90869161	ENSG00000221586.1	-	miRNA	KNOWN	MIR1261	1	1	-0.654889
chr11	90972316	90972521	90972418	ENSG00000280085.1	-	TEC	KNOWN	RP11-678K21.1	1	1	-0.212863
chr11	91013787	91015299	91014543	ENSG00000279209.1	+	TEC	KNOWN	RP11-678K21.2	1	1	-0.265560
chr11	91093875	91094260	91094067	ENSG00000279438.1	-	TEC	KNOWN	RP11-678K21.3	1	1	-0.409069
chr11	91114724	91115951	91115337	ENSG00000254677.1	-	processed_pseudogene	KNOWN	OSBPL9P2	1	1	-0.699061
chr11	91115961	91116555	91116258	ENSG00000255070.1	+	processed_pseudogene	KNOWN	OSBPL9P3	1	1	-0.699061
chr11	91158083	91167294	91162688	ENSG00000255187.1	+	lincRNA	KNOWN	RP11-699F16.2	1	3	-0.596064
chr11	91184934	91185543	91185238	ENSG00000280124.1	-	TEC	KNOWN	RP11-739P6.1	1	1	-0.443605
chr11	91208838	91209590	91209214	ENSG00000278980.1	-	TEC	KNOWN	RP11-739P6.2	1	1	-0.380379
chr11	91382909	91383289	91383099	ENSG00000280093.1	+	TEC	KNOWN	RP11-843F11.1	1	1	-0.513729
chr11	91794362	91812294	91803328	ENSG00000255332.7	+	lincRNA	KNOWN	RP11-201M22.1	3	4	-0.324846
chr11	91949731	91950034	91949882	ENSG00000254961.1	-	processed_pseudogene	KNOWN	TUBB4BP4	1	1	-0.103826
chr11	91992833	91993255	91993044	ENSG00000278859.1	+	TEC	KNOWN	RP11-806N19.2	1	1	-0.286520
chr11	92161106	92161889	92161497	ENSG00000242248.2	+	processed_pseudogene	KNOWN	RPL7AP57	1	1	-0.177615
chr11	92336032	92336496	92336264	ENSG00000235547.3	-	processed_pseudogene	KNOWN	NDUFB11P1	1	1	-0.242077
chr11	92352096	92896470	92624283	ENSG00000165323.15	+	protein_coding	KNOWN	FAT3	6	27	-0.276679
chr11	92366496	92367250	92366873	ENSG00000249255.1	-	processed_pseudogene	KNOWN	PGAM1P9	1	1	-0.340968
chr11	92400191	92408176	92404183	ENSG00000254705.1	-	antisense	KNOWN	RP11-675M1.2	1	5	-0.375340
chr11	92498152	92498935	92498543	ENSG00000244244.2	-	processed_pseudogene	KNOWN	RPS3AP42	1	1	-0.088580
chr11	92748732	92766867	92757799	ENSG00000255506.1	-	antisense	KNOWN	RP11-203F8.1	1	2	-0.343226
chr11	92914272	92915604	92914938	ENSG00000282916.1	-	lincRNA	KNOWN	RP11-676F20.4	1	3	-0.253936
chr11	92914603	92916591	92915597	ENSG00000255127.2	+	unprocessed_pseudogene	KNOWN	RP11-676F20.2	1	5	-0.253936
chr11	92915884	92931322	92923603	ENSG00000282940.1	+	lincRNA	KNOWN	RP11-676F20.5	1	2	-0.228554
chr11	92937441	92937666	92937553	ENSG00000255287.1	+	processed_pseudogene	KNOWN	SNRPGP16	1	1	0.042239
chr11	92965797	92966603	92966200	ENSG00000254874.1	+	lincRNA	KNOWN	RP11-676F20.1	1	2	-0.127974
chr11	92969720	92985066	92977393	ENSG00000134640.2	+	protein_coding	KNOWN	MTNR1B	3	3	0.243266
chr11	93052395	93052827	93052611	ENSG00000242807.1	-	processed_pseudogene	KNOWN	RPL26P31	1	1	0.138285
chr11	93071529	93072031	93071780	ENSG00000278892.1	+	TEC	KNOWN	RP11-183A22.3	1	1	0.214248
chr11	93133855	93134164	93134009	ENSG00000279304.1	+	TEC	KNOWN	RP11-573M3.6	1	1	-0.323046
chr11	93144171	93197964	93171067	ENSG00000180773.14	-	protein_coding	KNOWN	SLC36A4	7	11	-0.236105
chr11	93152075	93152750	93152412	ENSG00000255445.1	+	processed_pseudogene	KNOWN	RP11-573M3.3	1	1	-0.128696
chr11	93171134	93171906	93171520	ENSG00000280379.1	+	TEC	KNOWN	RP11-573M3.2	1	1	-0.330865
chr11	93206990	93207583	93207286	ENSG00000279269.1	-	TEC	KNOWN	RP11-573M3.5	1	1	-0.204250
chr11	93221486	93221630	93221558	ENSG00000233737.3	-	processed_pseudogene	KNOWN	RP11-573M3.4	1	1	-0.342191
chr11	93240133	93241168	93240650	ENSG00000255233.1	+	lincRNA	KNOWN	RP11-755E23.3	1	2	0.154388
chr11	93286629	93288903	93287766	ENSG00000279684.1	-	TEC	KNOWN	RP11-755E23.2	1	1	-0.275217
chr11	93329971	93438487	93384229	ENSG00000165325.13	+	protein_coding	KNOWN	CCDC67	12	14	-0.295082
chr11	93407825	93407913	93407869	ENSG00000221565.1	-	miRNA	NOVEL	AP004242.1	1	1	-0.153121
chr11	93478472	93543508	93510990	ENSG00000166002.6	-	protein_coding	KNOWN	SMCO4	6	3	0.198787
chr11	93535468	93535816	93535642	ENSG00000234106.3	+	processed_pseudogene	KNOWN	RP11-288E14.2	1	1	0.313164
chr11	93556913	93557206	93557059	ENSG00000240202.3	+	misc_RNA	KNOWN	RN7SL223P	1	1	0.002262
chr11	93587703	93588559	93588131	ENSG00000279454.1	+	TEC	KNOWN	RP11-178H8.1	1	1	-0.059172
chr11	93592187	93592669	93592428	ENSG00000278953.1	+	TEC	KNOWN	RP11-178H8.2	1	1	-0.050302
chr11	93609760	93610333	93610046	ENSG00000255515.1	-	processed_pseudogene	KNOWN	RP11-178H8.3	1	1	-0.209284
chr11	93661639	93730358	93695998	ENSG00000166004.14	+	protein_coding	KNOWN	CEP295	7	30	-0.027111
chr11	93719603	93719715	93719659	ENSG00000199875.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.108022
chr11	93721513	93721865	93721689	ENSG00000254911.3	+	antisense	KNOWN	SCARNA9	1	1	0.108022
chr11	93721542	93721621	93721581	ENSG00000275146.1	+	snoRNA	NOVEL	snoU2_19	1	1	0.108022
chr11	93721797	93721866	93721831	ENSG00000273885.1	+	snoRNA	NOVEL	snoU2-30	1	1	0.108022
chr11	93726654	93729805	93728229	ENSG00000279696.1	-	TEC	KNOWN	RP11-178H8.7	1	1	0.108022
chr11	93729948	93784391	93757169	ENSG00000166012.14	-	protein_coding	KNOWN	TAF1D	22	14	0.008856
chr11	93730513	93730646	93730579	ENSG00000207112.1	-	snoRNA	KNOWN	SNORA25	1	1	-0.159141
chr11	93730979	93731099	93731039	ENSG00000206799.1	-	snoRNA	KNOWN	SNORA32	1	1	-0.159141
chr11	93731502	93731574	93731538	ENSG00000202314.1	-	snoRNA	KNOWN	SNORD6	1	1	-0.159141
chr11	93732004	93732133	93732068	ENSG00000206834.1	-	snoRNA	KNOWN	SNORA1	1	1	-0.159141
chr11	93732361	93732499	93732430	ENSG00000207304.1	-	snoRNA	KNOWN	SNORA8	1	1	-0.159141
chr11	93732435	93732501	93732468	ENSG00000281293.1	-	miRNA	NOVEL	AP001273.1	1	1	-0.159141
chr11	93733228	93733300	93733264	ENSG00000239195.1	-	snoRNA	KNOWN	SNORD5	1	1	-0.159141
chr11	93733466	93733597	93733531	ENSG00000207145.1	-	snoRNA	KNOWN	SNORA18	1	1	-0.159141
chr11	93733674	93733764	93733719	ENSG00000221170.1	-	miRNA	KNOWN	MIR1304	1	1	-0.159141
chr11	93735111	93735236	93735173	ENSG00000210825.1	-	snoRNA	KNOWN	SNORA40	1	1	-0.159141
chr11	93741591	93764749	93753170	ENSG00000182919.14	+	protein_coding	KNOWN	C11orf54	15	10	0.020261
chr11	93784227	93814695	93799461	ENSG00000042429.10	+	protein_coding	KNOWN	MED17	11	12	0.046035
chr11	93818232	93850531	93834381	ENSG00000214376.5	-	protein_coding	KNOWN	VSTM5	3	4	0.078019
chr11	93827622	93827734	93827678	ENSG00000206911.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.016157
chr11	93991346	93991429	93991387	ENSG00000255995.1	-	processed_pseudogene	KNOWN	HPRTP4	1	1	-0.366373
chr11	93998643	93999218	93998930	ENSG00000256752.1	-	processed_pseudogene	KNOWN	HPRT1P3	1	1	-0.366373
chr11	94021361	94113751	94067556	ENSG00000181333.11	+	protein_coding	KNOWN	HEPHL1	1	20	-0.089832
chr11	94055023	94055972	94055497	ENSG00000227593.2	-	processed_pseudogene	KNOWN	PHBP16	1	1	-0.087456
chr11	94128928	94181972	94155450	ENSG00000110218.8	+	protein_coding	KNOWN	PANX1	2	5	0.272781
chr11	94188449	94188997	94188723	ENSG00000256745.1	-	processed_pseudogene	KNOWN	RP11-680H20.1	1	1	0.068908
chr11	94238150	94279206	94258678	ENSG00000250519.6	+	lincRNA	KNOWN	RP11-680H20.2	2	3	-0.184695
chr11	94305593	94307721	94306657	ENSG00000183560.8	+	protein_coding	KNOWN	IZUMO1R	2	4	-0.271699
chr11	94377311	94401419	94389365	ENSG00000123901.8	-	protein_coding	KNOWN	GPR83	2	4	-0.093774
chr11	94415578	94493908	94454743	ENSG00000020922.12	-	protein_coding	KNOWN	MRE11A	10	20	-0.341200
chr11	94466495	94466580	94466537	ENSG00000221230.1	-	miRNA	KNOWN	MIR548L	1	1	-0.481916
chr11	94472908	94473570	94473239	ENSG00000255893.1	-	antisense	KNOWN	RP11-685N10.1	1	2	-0.007544
chr11	94493629	94499583	94496606	ENSG00000168876.8	+	protein_coding	KNOWN	ANKRD49	11	4	-0.276547
chr11	94512581	94532123	94522352	ENSG00000257057.1	+	lincRNA	KNOWN	C11orf97	1	4	-0.110528
chr11	94543840	94549898	94546869	ENSG00000196371.3	+	protein_coding	KNOWN	FUT4	1	1	-0.068899
chr11	94543840	94621421	94582630	ENSG00000134627.11	+	protein_coding	KNOWN	PIWIL4	5	20	0.031455
chr11	94545330	94740355	94642842	ENSG00000255929.5	-	antisense	KNOWN	RP11-867G2.8	2	5	0.035762
chr11	94559018	94559374	94559196	ENSG00000280167.1	+	TEC	KNOWN	RP11-867G2.4	1	1	0.162002
chr11	94638038	94640833	94639435	ENSG00000233536.2	+	lincRNA	KNOWN	RP11-867G2.5	1	6	0.117083
chr11	94641907	94651631	94646769	ENSG00000255666.5	+	lincRNA	KNOWN	RP11-867G2.6	4	7	0.118490
chr11	94706431	94876753	94791592	ENSG00000166025.17	+	protein_coding	KNOWN	AMOTL1	5	13	0.009157
chr11	94874052	94925521	94899786	ENSG00000256469.1	-	antisense	KNOWN	RP11-856F16.2	1	2	0.099564
chr11	94913047	94913766	94913406	ENSG00000213368.3	+	processed_pseudogene	KNOWN	ST13P11	1	1	-0.005705
chr11	94962622	94973612	94968117	ENSG00000150316.11	-	protein_coding	KNOWN	CWC15	6	7	0.316127
chr11	94973681	94999518	94986599	ENSG00000186280.6	+	protein_coding	KNOWN	KDM4D	3	3	-0.337080
chr11	95011858	95012532	95012195	ENSG00000255653.1	+	unprocessed_pseudogene	KNOWN	RP11-60C6.3	1	1	-0.130401
chr11	95025258	95027596	95026427	ENSG00000235268.2	+	protein_coding	KNOWN	KDM4E	1	1	-0.130401
chr11	95030549	95031245	95030897	ENSG00000274486.1	+	unprocessed_pseudogene	KNOWN	RP11-60C6.8	1	1	0.138786
chr11	95037482	95038456	95037969	ENSG00000256779.1	+	processed_pseudogene	KNOWN	RP11-60C6.5	1	1	0.138786
chr11	95040411	95041571	95040991	ENSG00000257012.1	+	unprocessed_pseudogene	KNOWN	RP11-60C6.6	1	1	0.138786
chr11	95049422	95050945	95050183	ENSG00000255855.1	+	unprocessed_pseudogene	KNOWN	RP11-735A19.2	1	1	-0.168611
chr11	95057282	95057984	95057633	ENSG00000277984.1	+	unprocessed_pseudogene	KNOWN	RP11-735A19.3	1	1	-0.356104
chr11	95067197	95071224	95069210	ENSG00000263465.3	+	protein_coding	KNOWN	SRSF8	1	1	-0.280677
chr11	95089810	95132645	95111227	ENSG00000149218.4	+	protein_coding	KNOWN	ENDOD1	1	2	-0.060602
chr11	95143637	95145125	95144381	ENSG00000270689.1	+	processed_pseudogene	KNOWN	BUD13P1	1	1	0.024878
chr11	95145437	95146004	95145720	ENSG00000270578.1	+	processed_pseudogene	KNOWN	RP11-712B9.5	1	1	0.024878
chr11	95150539	95234104	95192321	ENSG00000245552.6	+	antisense	KNOWN	RP11-712B9.2	8	6	-0.431295
chr11	95165513	95232541	95199027	ENSG00000149212.11	-	protein_coding	KNOWN	SESN3	6	10	-0.562549
chr11	95203727	95204033	95203880	ENSG00000282834.1	+	processed_pseudogene	KNOWN	RP11-712B9.6	1	1	-0.748530
chr11	95254503	95254621	95254562	ENSG00000276602.2	+	miRNA	NOVEL	AP000787.1	1	1	-0.372971
chr11	95473272	95473374	95473323	ENSG00000201204.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.278991
chr11	95482406	95497553	95489979	ENSG00000250390.2	+	lincRNA	KNOWN	RP11-338H14.1	1	3	-0.333165
chr11	95698086	95700623	95699354	ENSG00000255605.1	+	lincRNA	KNOWN	RP11-644L4.1	1	3	-0.005107
chr11	95756959	95757442	95757200	ENSG00000273600.1	-	processed_pseudogene	KNOWN	CTD-2564P9.3	1	1	-0.557101
chr11	95768942	95790409	95779675	ENSG00000077458.12	-	protein_coding	KNOWN	FAM76B	13	12	-0.384400
chr11	95789965	95832693	95811329	ENSG00000166037.10	+	protein_coding	KNOWN	CEP57	16	11	-0.188428
chr11	95832882	95925315	95879098	ENSG00000087053.18	-	protein_coding	KNOWN	MTMR2	15	17	-0.124394
chr11	95840017	95840124	95840070	ENSG00000222578.1	-	rRNA	KNOWN	RNA5SP345	1	1	-0.087917
chr11	95963219	95963624	95963421	ENSG00000242993.1	+	processed_pseudogene	KNOWN	RP11-697H10.1	1	1	0.064335
chr11	95976598	96343180	96159889	ENSG00000184384.13	-	protein_coding	KNOWN	MAML2	2	5	0.075793
chr11	95990932	95991017	95990974	ENSG00000216073.3	-	miRNA	NOVEL	AP000870.1	1	1	-0.097203
chr11	96341427	96341534	96341480	ENSG00000266192.2	+	miRNA	KNOWN	MIR1260B	1	1	0.142916
chr11	96352769	96389923	96371346	ENSG00000149231.11	-	protein_coding	KNOWN	CCDC82	8	9	-0.257187
chr11	96389989	96507574	96448781	ENSG00000183340.6	+	protein_coding	KNOWN	JRKL	2	3	-0.322267
chr11	96447132	96506826	96476979	ENSG00000255679.1	-	lincRNA	KNOWN	JRKL-AS1	1	4	-0.338866
chr11	96474572	96474692	96474632	ENSG00000200411.1	-	rRNA	KNOWN	RNA5SP346	1	1	-0.163847
chr11	96508425	96514748	96511586	ENSG00000256684.1	+	lincRNA	KNOWN	RP11-49K4.2	1	4	-0.338821
chr11	96590317	96713822	96652069	ENSG00000254587.1	+	lincRNA	KNOWN	RP11-360K13.1	1	4	-0.528854
chr11	96642671	96643225	96642948	ENSG00000255376.1	-	processed_pseudogene	KNOWN	RP11-360K13.2	1	1	-0.569025
chr11	97000274	97000711	97000492	ENSG00000255205.1	-	processed_pseudogene	KNOWN	MED28P5	1	1	-0.513377
chr11	97086160	97086682	97086421	ENSG00000270753.1	-	processed_pseudogene	KNOWN	RP11-693I21.1	1	1	-0.527528
chr11	97222644	97259987	97241315	ENSG00000255039.1	-	lincRNA	KNOWN	RP11-882G5.1	1	3	-0.588226
chr11	97657464	97657582	97657523	ENSG00000199315.1	+	rRNA	KNOWN	RNA5SP347	1	1	-0.413536
chr11	97878781	97942762	97910771	ENSG00000255502.5	-	lincRNA	KNOWN	RP11-379J13.2	2	4	-0.370460
chr11	97908253	97908537	97908395	ENSG00000254555.1	-	processed_pseudogene	KNOWN	RP11-379J13.1	1	1	-0.350013
chr11	98130239	98131198	98130718	ENSG00000255380.1	-	processed_pseudogene	KNOWN	RP11-684B20.1	1	1	-0.527977
chr11	98565074	98566827	98565950	ENSG00000254939.1	-	processed_pseudogene	KNOWN	CTD-2342I9.1	1	1	-0.648141
chr11	98676391	98683735	98680063	ENSG00000254599.1	+	lincRNA	KNOWN	RP11-115E19.1	1	3	-0.644974
chr11	98938912	98945079	98941995	ENSG00000254830.1	-	lincRNA	KNOWN	RP11-99C10.1	1	2	-0.813793
chr11	99020953	100358885	99689919	ENSG00000149972.10	+	protein_coding	KNOWN	CNTN5	12	25	-0.584455
chr11	99120176	99120490	99120333	ENSG00000223269.1	+	misc_RNA	KNOWN	RN7SKP53	1	1	-0.443045
chr11	99424938	99425005	99424971	ENSG00000266616.1	-	miRNA	NOVEL	AP003558.1	1	1	-0.700413
chr11	100336856	100337625	100337240	ENSG00000255547.1	+	processed_pseudogene	KNOWN	RPA2P3	1	1	-0.270578
chr11	100641975	100642273	100642124	ENSG00000242165.3	-	misc_RNA	KNOWN	RN7SL222P	1	1	-0.376288
chr11	100666459	100666962	100666710	ENSG00000255059.1	+	processed_pseudogene	KNOWN	AP000620.1	1	1	-0.708239
chr11	100684162	100687955	100686058	ENSG00000248027.1	-	antisense	KNOWN	CTD-2383M3.1	1	2	-0.240584
chr11	100687653	100991937	100839795	ENSG00000165895.17	+	protein_coding	KNOWN	ARHGAP42	8	24	-0.271724
chr11	100794450	100794535	100794492	ENSG00000265208.2	+	miRNA	NOVEL	AC015600.1	1	1	-0.383346
chr11	100839630	100839946	100839788	ENSG00000200047.1	+	misc_RNA	KNOWN	RN7SKP115	1	1	-0.454290
chr11	100991989	100993941	100992965	ENSG00000170647.3	+	protein_coding	KNOWN	TMEM133	1	1	-0.595069
chr11	101029624	101130524	101080074	ENSG00000082175.14	-	protein_coding	KNOWN	PGR	11	8	-0.425852
chr11	101129077	101209591	101169334	ENSG00000282728.1	+	processed_transcript	KNOWN	RP11-788M5.4	2	7	-0.399120
chr11	101208905	101209450	101209177	ENSG00000255504.2	+	transcribed_processed_pseudogene	KNOWN	RP11-788M5.3	1	1	-0.568802
chr11	101451564	101872562	101662063	ENSG00000137672.12	-	protein_coding	KNOWN	TRPC6	7	13	-0.364511
chr11	101519820	101519905	101519862	ENSG00000263885.1	-	miRNA	KNOWN	MIR3920	1	1	-0.192217
chr11	101584295	101595156	101589725	ENSG00000254506.1	+	transcribed_processed_pseudogene	KNOWN	RP11-748H22.1	2	3	-0.732507
chr11	101765935	101769961	101767948	ENSG00000254534.1	-	unprocessed_pseudogene	KNOWN	RP11-748H22.2	1	2	-0.503942
chr11	101890674	101916522	101903598	ENSG00000187151.7	-	protein_coding	KNOWN	ANGPTL5	2	9	-0.430135
chr11	101915015	102001058	101958036	ENSG00000110318.13	+	protein_coding	KNOWN	CEP126	3	11	-0.324473
chr11	102047443	102084560	102066001	ENSG00000137691.12	+	protein_coding	KNOWN	C11orf70	5	7	0.037619
chr11	102057854	102057960	102057907	ENSG00000274097.1	+	rRNA	NOVEL	5S_rRNA	1	1	0.121536
chr11	102107886	102109842	102108864	ENSG00000260008.1	+	lincRNA	KNOWN	RP11-732A21.2	1	1	-0.157986
chr11	102109827	102110457	102110142	ENSG00000277459.1	-	lincRNA	KNOWN	RP11-732A21.3	1	1	-0.073739
chr11	102110461	102233423	102171942	ENSG00000137693.13	+	protein_coding	KNOWN	YAP1	11	9	0.078766
chr11	102229851	102230922	102230386	ENSG00000254422.1	-	antisense	KNOWN	RP11-864G5.3	1	2	0.063640
chr11	102295060	102295806	102295433	ENSG00000243777.1	+	processed_pseudogene	KNOWN	RP11-864G5.1	1	1	0.041951
chr11	102306112	102306271	102306191	ENSG00000270868.1	+	processed_pseudogene	KNOWN	RP11-864G5.7	1	1	0.041951
chr11	102308557	102308797	102308677	ENSG00000271600.1	-	processed_pseudogene	KNOWN	RP11-864G5.8	1	1	0.041951
chr11	102313722	102313829	102313775	ENSG00000212466.1	+	snRNA	KNOWN	RNU6-952P	1	1	0.184603
chr11	102317450	102339403	102328426	ENSG00000023445.13	+	protein_coding	KNOWN	BIRC3	7	10	-0.155116
chr11	102347211	102378670	102362940	ENSG00000110330.8	+	protein_coding	KNOWN	BIRC2	14	10	-0.066578
chr11	102396332	102470384	102433358	ENSG00000152558.14	-	protein_coding	KNOWN	TMEM123	8	5	0.135547
chr11	102452919	102462008	102457463	ENSG00000255337.1	+	antisense	KNOWN	RP11-315O6.1	1	2	0.283569
chr11	102467255	102498801	102483028	ENSG00000255482.1	+	antisense	KNOWN	RP11-315O6.2	1	3	-0.101342
chr11	102520508	102530753	102525630	ENSG00000137673.8	-	protein_coding	KNOWN	MMP7	3	6	-0.236920
chr11	102576835	102625332	102601083	ENSG00000137674.3	-	protein_coding	KNOWN	MMP20	3	10	-0.198350
chr11	102606916	102628070	102617493	ENSG00000256916.1	+	antisense	KNOWN	RP11-817J15.2	2	4	0.027635
chr11	102681310	102683913	102682611	ENSG00000281655.1	+	lincRNA	KNOWN	RP11-817J15.3	1	3	-0.258695
chr11	102691487	102705806	102698646	ENSG00000137675.4	-	protein_coding	KNOWN	MMP27	1	10	-0.300326
chr11	102711795	102727050	102719422	ENSG00000118113.11	-	protein_coding	KNOWN	MMP8	6	12	-0.190044
chr11	102746968	102836766	102791867	ENSG00000255282.6	+	transcribed_processed_pseudogene	KNOWN	WTAPP1	5	8	-0.238037
chr11	102751070	102754943	102753006	ENSG00000225678.2	-	transcribed_unprocessed_pseudogene	KNOWN	AP000619.5	2	7	-0.537897
chr11	102766801	102767927	102767364	ENSG00000256254.1	-	processed_pseudogene	KNOWN	AP000647.3	1	1	-0.537897
chr11	102770503	102780628	102775565	ENSG00000166670.9	-	protein_coding	KNOWN	MMP10	2	10	-0.123737
chr11	102789920	102798160	102794040	ENSG00000196611.4	-	protein_coding	KNOWN	MMP1	1	10	-0.200051
chr11	102806948	102807916	102807432	ENSG00000256035.1	-	processed_pseudogene	KNOWN	AP000619.6	1	1	-0.200790
chr11	102835801	102843803	102839802	ENSG00000149968.11	-	protein_coding	KNOWN	MMP3	3	10	0.198344
chr11	102862736	102875034	102868885	ENSG00000262406.2	-	protein_coding	KNOWN	MMP12	1	10	0.015077
chr11	102880492	102880846	102880669	ENSG00000255469.1	+	processed_pseudogene	KNOWN	BOLA3P1	1	1	0.084087
chr11	102903892	102903953	102903922	ENSG00000238562.1	-	snRNA	KNOWN	RNU7-159P	1	1	0.224299
chr11	102942995	102955734	102949364	ENSG00000137745.11	-	protein_coding	KNOWN	MMP13	3	11	0.085180
chr11	102963460	102966628	102965044	ENSG00000276521.1	-	unprocessed_pseudogene	KNOWN	RP11-690D19.4	1	3	-0.136709
chr11	103045237	103045712	103045474	ENSG00000239861.1	+	processed_pseudogene	KNOWN	RP11-690D19.1	1	1	-0.107317
chr11	103050687	103055799	103053243	ENSG00000260966.1	-	sense_overlapping	KNOWN	RP11-690D19.3	1	1	0.012920
chr11	103062076	103092215	103077145	ENSG00000137692.11	-	protein_coding	KNOWN	DCUN1D5	11	8	0.035602
chr11	103109431	103479863	103294647	ENSG00000187240.13	+	protein_coding	KNOWN	DYNC2H1	9	90	-0.255803
chr11	103402013	103402586	103402299	ENSG00000254895.2	-	processed_pseudogene	KNOWN	MTCO3P15	1	1	-0.117727
chr11	103402588	103403422	103403005	ENSG00000254931.2	-	processed_pseudogene	KNOWN	MTATP6P15	1	1	-0.117727
chr11	103403512	103404167	103403839	ENSG00000255417.1	-	processed_pseudogene	KNOWN	MTCO2P15	1	1	-0.117727
chr11	103404309	103405834	103405071	ENSG00000255350.1	-	processed_pseudogene	KNOWN	MTCO1P15	1	1	-0.117727
chr11	103406213	103407241	103406727	ENSG00000254565.1	-	processed_pseudogene	KNOWN	MTND2P26	1	1	-0.117727
chr11	103407441	103408376	103407908	ENSG00000253245.2	-	processed_pseudogene	KNOWN	MTND1P36	1	1	-0.117727
chr11	103409580	103409657	103409618	ENSG00000254824.1	-	processed_pseudogene	KNOWN	RP11-37O16.8	1	1	-0.117727
chr11	103675994	103895271	103785632	ENSG00000254987.1	-	lincRNA	KNOWN	RP11-563P16.1	1	5	-0.132950
chr11	103849906	103849980	103849943	ENSG00000264200.1	+	miRNA	KNOWN	MIR4693	1	1	-0.180380
chr11	103907186	104164379	104035782	ENSG00000170962.12	-	protein_coding	KNOWN	PDGFD	3	7	-0.364765
chr11	103945548	103946546	103946047	ENSG00000255548.1	+	antisense	KNOWN	RP11-617B3.2	1	2	-0.109266
chr11	104036580	104039188	104037884	ENSG00000170967.4	+	protein_coding	KNOWN	DDI1	1	1	-0.174654
chr11	104445868	104609321	104527594	ENSG00000256422.5	-	lincRNA	KNOWN	RP11-886D15.1	3	5	-0.610589
chr11	104682383	104682581	104682482	ENSG00000270449.1	-	processed_pseudogene	KNOWN	RP11-681H10.1	1	1	-0.516128
chr11	104873264	104873417	104873340	ENSG00000254569.1	+	unprocessed_pseudogene	KNOWN	RP11-693N9.1	1	1	-0.336851
chr11	104885718	104898670	104892194	ENSG00000204403.9	-	polymorphic_pseudogene	KNOWN	CASP12	12	9	-0.385199
chr11	104901549	104919073	104910311	ENSG00000235505.7	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-693N9.2	10	6	-0.303396
chr11	104942866	104969436	104956151	ENSG00000196954.12	-	protein_coding	KNOWN	CASP4	14	10	-0.241287
chr11	104994235	105023168	105008701	ENSG00000137757.10	-	protein_coding	KNOWN	CASP5	9	10	-0.346248
chr11	105025443	105035250	105030346	ENSG00000137752.22	-	protein_coding	KNOWN	CASP1	16	10	-0.072278
chr11	105041326	105101431	105071378	ENSG00000204397.7	-	protein_coding	KNOWN	CARD16	5	4	-0.128668
chr11	105063345	105071541	105067443	ENSG00000254750.1	-	unprocessed_pseudogene	KNOWN	CASP1P2	1	9	0.005334
chr11	105092469	105101431	105096950	ENSG00000255221.2	-	protein_coding	KNOWN	CARD17	1	4	-0.477374
chr11	105122661	105123339	105123000	ENSG00000255430.1	-	unprocessed_pseudogene	KNOWN	CASP1P1	1	2	-0.301829
chr11	105137721	105139726	105138723	ENSG00000255501.1	-	protein_coding	KNOWN	CARD18	3	3	-0.103404
chr11	105157927	105531697	105344812	ENSG00000254998.1	-	lincRNA	KNOWN	RP11-94P11.4	1	5	-0.496200
chr11	105194440	105194946	105194693	ENSG00000254767.1	-	unprocessed_pseudogene	KNOWN	OR2AL1P	1	1	-0.376852
chr11	105246880	105247060	105246970	ENSG00000255336.1	-	unprocessed_pseudogene	KNOWN	RP11-94P11.3	1	1	-0.245043
chr11	105352670	105352956	105352813	ENSG00000278640.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.887049
chr11	105609994	105982092	105796043	ENSG00000152578.12	+	protein_coding	KNOWN	GRIA4	15	17	-0.545190
chr11	105706299	105707937	105707118	ENSG00000255403.1	+	processed_pseudogene	KNOWN	AP000641.1	1	1	-0.576387
chr11	105824634	105824770	105824702	ENSG00000222663.1	+	snRNA	KNOWN	RNU4-55P	1	1	-0.618502
chr11	105933951	105934034	105933992	ENSG00000263371.2	+	miRNA	NOVEL	AP000673.1	1	1	-0.352310
chr11	105974826	105974931	105974878	ENSG00000252081.1	-	snRNA	KNOWN	RNU6-277P	1	1	-0.734360
chr11	105995623	106022403	106009013	ENSG00000170903.10	-	protein_coding	KNOWN	MSANTD4	6	4	-0.369488
chr11	106051098	106077765	106064431	ENSG00000182359.14	-	protein_coding	KNOWN	KBTBD3	7	4	-0.210056
chr11	106075501	106098710	106087105	ENSG00000149313.10	+	protein_coding	KNOWN	AASDHPPT	5	6	-0.191703
chr11	106085990	106101975	106093982	ENSG00000254433.1	-	antisense	KNOWN	RP11-677I18.3	2	5	-0.210497
chr11	106112459	106132116	106122287	ENSG00000254580.1	-	lincRNA	KNOWN	RP11-677I18.4	1	3	-0.280775
chr11	106139000	106139077	106139038	ENSG00000281713.1	-	miRNA	NOVEL	AP001001.1	1	1	-0.373672
chr11	106250019	106264905	106257462	ENSG00000254811.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-680E19.1	3	6	-0.210278
chr11	106310045	106311791	106310918	ENSG00000255065.1	+	processed_pseudogene	KNOWN	RP11-680E19.2	1	2	-0.057234
chr11	106674012	107018524	106846268	ENSG00000152402.10	-	protein_coding	KNOWN	GUCY1A2	3	9	-0.509123
chr11	106801349	106801492	106801420	ENSG00000264542.1	-	miRNA	NOVEL	AP001282.1	1	1	0.018928
chr11	106824025	106824954	106824489	ENSG00000274584.1	+	unprocessed_pseudogene	KNOWN	RP11-819M15.2	1	2	-0.611876
chr11	106826392	106827890	106827141	ENSG00000213252.3	-	processed_pseudogene	KNOWN	RP11-819M15.1	1	1	-0.611876
chr11	107176286	107177530	107176908	ENSG00000255353.1	+	processed_pseudogene	KNOWN	RP11-382M14.1	1	1	-0.225623
chr11	107312132	107316271	107314201	ENSG00000261098.1	-	lincRNA	KNOWN	RP11-819C21.1	1	1	-0.719399
chr11	107326345	107457844	107392094	ENSG00000152404.15	-	protein_coding	KNOWN	CWF19L2	4	18	-0.351481
chr11	107403404	107404589	107403996	ENSG00000225215.1	-	processed_pseudogene	KNOWN	SMARCE1P1	1	1	-0.118575
chr11	107502726	107565746	107534236	ENSG00000137760.14	-	protein_coding	KNOWN	ALKBH8	7	15	-0.291215
chr11	107585901	107586903	107586402	ENSG00000270969.1	-	processed_pseudogene	KNOWN	CTD-2355J17.2	1	1	-0.023485
chr11	107591091	107666779	107628935	ENSG00000110675.12	+	protein_coding	KNOWN	ELMOD1	7	13	-0.173214
chr11	107600379	107600868	107600623	ENSG00000255483.1	-	processed_pseudogene	KNOWN	AP000889.2	1	1	-0.176943
chr11	107614347	107614456	107614401	ENSG00000273930.1	-	miRNA	NOVEL	AP000889.3	1	1	-0.221669
chr11	107642887	107643871	107643379	ENSG00000254758.1	-	unprocessed_pseudogene	KNOWN	AP000889.1	1	2	0.073255
chr11	107707378	107719693	107713535	ENSG00000170290.3	-	protein_coding	KNOWN	SLN	3	3	0.056832
chr11	107736009	107738718	107737363	ENSG00000254702.1	-	processed_pseudogene	KNOWN	CTD-2651C21.3	1	2	-0.315008
chr11	107790991	107928293	107859642	ENSG00000110660.14	-	protein_coding	KNOWN	SLC35F2	6	11	0.005799
chr11	107908420	107908764	107908592	ENSG00000240652.1	+	processed_pseudogene	KNOWN	RP11-832N8.1	1	1	0.029061
chr11	107928503	107963482	107945992	ENSG00000179331.2	+	protein_coding	KNOWN	RAB39A	1	2	-0.076116
chr11	107957902	107958009	107957955	ENSG00000276237.1	-	miRNA	NOVEL	AP003307.1	1	1	-0.193680
chr11	108008733	108107776	108058254	ENSG00000166266.13	+	protein_coding	KNOWN	CUL5	6	20	0.034818
chr11	108084913	108085014	108084963	ENSG00000200855.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.013565
chr11	108105074	108121684	108113379	ENSG00000255467.1	-	antisense	KNOWN	RP11-144G7.2	1	4	-0.253563
chr11	108121516	108147776	108134646	ENSG00000075239.13	+	protein_coding	KNOWN	ACAT1	12	12	0.213220
chr11	108157215	108222642	108189928	ENSG00000149308.16	-	protein_coding	KNOWN	NPAT	6	18	0.111429
chr11	108222484	108369102	108295793	ENSG00000149311.17	+	protein_coding	KNOWN	ATM	25	64	-0.069067
chr11	108229503	108229604	108229553	ENSG00000206967.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.339085
chr11	108308519	108467531	108388025	ENSG00000166323.12	-	protein_coding	KNOWN	C11orf65	8	13	-0.079088
chr11	108469455	108469552	108469503	ENSG00000221607.1	-	miRNA	NOVEL	AP005718.1	1	1	-0.090662
chr11	108472105	108498432	108485268	ENSG00000178202.12	-	protein_coding	KNOWN	KDELC2	6	8	0.203762
chr11	108505431	108593738	108549584	ENSG00000110723.11	-	protein_coding	KNOWN	EXPH5	6	7	0.188600
chr11	108665025	108940930	108802977	ENSG00000178105.9	+	protein_coding	KNOWN	DDX10	8	18	-0.118225
chr11	108690289	108690956	108690622	ENSG00000240698.1	-	processed_pseudogene	KNOWN	RPS2P39	1	1	0.054998
chr11	108727741	108730104	108728922	ENSG00000254730.1	-	processed_pseudogene	KNOWN	RP11-801G16.2	1	2	-0.528385
chr11	108822333	108822650	108822491	ENSG00000255379.1	-	processed_pseudogene	KNOWN	CYCSP29	1	1	-0.280920
chr11	108957718	108959797	108958757	ENSG00000203334.4	+	lincRNA	KNOWN	RP11-25I9.3	2	3	0.271626
chr11	109002465	109037967	109020216	ENSG00000255528.1	-	lincRNA	KNOWN	RP11-25I9.2	1	2	0.027326
chr11	109005517	109005623	109005570	ENSG00000201243.1	+	snRNA	KNOWN	RNU6-654P	1	1	-0.303146
chr11	109120878	109120986	109120932	ENSG00000200613.1	-	rRNA	KNOWN	RNA5SP349	1	1	-0.113123
chr11	109263494	109263564	109263529	ENSG00000264997.1	-	snoRNA	NOVEL	SNORD39	1	1	-0.396627
chr11	109355085	109583907	109469496	ENSG00000255028.5	-	antisense	KNOWN	RP11-708B6.2	2	5	-0.198782
chr11	109422120	109429114	109425617	ENSG00000185742.6	+	protein_coding	KNOWN	C11orf87	1	2	-0.354755
chr11	109486968	109487424	109487196	ENSG00000254890.1	-	processed_pseudogene	KNOWN	RP11-10A7.1	1	1	-0.747544
chr11	109637468	109638128	109637798	ENSG00000254482.1	-	processed_pseudogene	KNOWN	RP11-386B1.1	1	1	-0.367440
chr11	109751442	109823847	109787644	ENSG00000254659.2	-	lincRNA	KNOWN	RP11-262A12.1	1	5	-0.357249
chr11	109907004	109907741	109907372	ENSG00000254798.1	-	processed_pseudogene	KNOWN	TFAMP2	1	1	-0.360975
chr11	109982192	109983043	109982617	ENSG00000224776.3	+	processed_pseudogene	KNOWN	RPSAP50	1	1	-0.223050
chr11	109985243	109985660	109985451	ENSG00000270423.1	-	processed_pseudogene	KNOWN	RP11-361A21.3	1	1	-0.223050
chr11	110049528	110050160	110049844	ENSG00000255210.1	+	processed_pseudogene	KNOWN	RP11-344L21.1	1	1	-0.116562
chr11	110093361	110171841	110132601	ENSG00000149289.10	+	protein_coding	KNOWN	ZC3H12C	3	6	-0.289677
chr11	110174880	110296722	110235801	ENSG00000137710.14	-	protein_coding	KNOWN	RDX	18	17	-0.015444
chr11	110355130	110406400	110380765	ENSG00000254416.5	+	lincRNA	KNOWN	RP11-347E10.1	2	3	-0.027918
chr11	110429883	110464881	110447382	ENSG00000137714.2	+	protein_coding	KNOWN	FDX1	1	4	0.072470
chr11	110577042	110713189	110645115	ENSG00000137727.12	-	protein_coding	KNOWN	ARHGAP20	6	16	-0.221531
chr11	110788026	110788976	110788501	ENSG00000233497.4	-	processed_pseudogene	KNOWN	HNRNPA1P60	1	1	-0.107617
chr11	110876994	110877177	110877085	ENSG00000255149.1	-	processed_pseudogene	KNOWN	RP11-97I14.1	1	1	-0.235734
chr11	111040098	111040208	111040153	ENSG00000200168.1	-	rRNA	KNOWN	RNA5SP350	1	1	-0.405914
chr11	111089870	111090368	111090119	ENSG00000271390.1	-	lincRNA	KNOWN	RP11-89C3.3	1	1	-0.086053
chr11	111091932	111097357	111094644	ENSG00000271584.1	-	lincRNA	KNOWN	RP11-89C3.4	1	2	-0.074980
chr11	111105547	111105895	111105721	ENSG00000239354.1	-	processed_pseudogene	KNOWN	RPS17P15	1	1	-0.074980
chr11	111107060	111107750	111107405	ENSG00000270202.1	-	processed_pseudogene	KNOWN	RP11-89C3.2	1	1	-0.074980
chr11	111255982	111286401	111271191	ENSG00000150750.6	+	protein_coding	KNOWN	C11orf53	1	4	-0.189301
chr11	111290787	111305045	111297916	ENSG00000196167.9	-	antisense	KNOWN	COLCA1	5	2	0.303496
chr11	111298546	111308735	111303640	ENSG00000214290.7	+	protein_coding	KNOWN	COLCA2	5	5	0.303496
chr11	111347757	111347824	111347790	ENSG00000264032.1	+	miRNA	KNOWN	MIR4491	1	1	0.250538
chr11	111352252	111455630	111403941	ENSG00000110777.11	-	protein_coding	KNOWN	POU2AF1	12	6	0.085662
chr11	111383092	111383219	111383155	ENSG00000253099.1	+	snRNA	KNOWN	RNU2-60P	1	1	0.068908
chr11	111414242	111418186	111416214	ENSG00000255428.1	-	sense_intronic	KNOWN	RP11-794P6.1	1	4	0.125780
chr11	111449868	111451311	111450589	ENSG00000255208.1	+	antisense	KNOWN	RP11-794P6.3	1	5	0.533241
chr11	111451339	111458151	111454745	ENSG00000255093.1	+	antisense	KNOWN	RP11-794P6.2	2	6	0.557373
chr11	111467526	111512354	111489940	ENSG00000137707.13	-	protein_coding	KNOWN	BTG4	3	6	0.155621
chr11	111512931	111513040	111512985	ENSG00000207811.2	+	miRNA	KNOWN	MIR34B	1	1	-0.201454
chr11	111513431	111513538	111513484	ENSG00000207562.2	+	miRNA	KNOWN	MIR34C	1	1	-0.201454
chr11	111514043	111526755	111520399	ENSG00000254980.1	-	antisense	KNOWN	RP11-794P6.6	1	2	-0.201454
chr11	111514785	111537031	111525908	ENSG00000183644.13	+	protein_coding	KNOWN	C11orf88	4	7	-0.184643
chr11	111540280	111561745	111551012	ENSG00000204381.11	+	protein_coding	KNOWN	LAYN	10	8	0.085213
chr11	111602391	111730853	111666622	ENSG00000170145.4	+	protein_coding	KNOWN	SIK2	2	15	0.083208
chr11	111670956	111672404	111671680	ENSG00000235286.1	-	processed_pseudogene	KNOWN	AP000925.2	1	1	0.249533
chr11	111683111	111683424	111683267	ENSG00000223324.1	+	misc_RNA	KNOWN	RN7SKP273	1	1	0.249533
chr11	111726908	111766427	111746667	ENSG00000137713.15	-	protein_coding	KNOWN	PPP2R1B	12	16	0.380939
chr11	111768668	111778350	111773509	ENSG00000254990.5	-	lincRNA	KNOWN	RP11-108O10.2	2	4	0.326230
chr11	111782195	111871581	111826888	ENSG00000086848.14	-	protein_coding	KNOWN	ALG9	17	15	0.280845
chr11	111786286	111879425	111832855	ENSG00000258529.5	-	protein_coding	KNOWN	RP11-108O10.8	3	19	0.281550
chr11	111817214	111829212	111823213	ENSG00000254450.1	-	sense_intronic	KNOWN	ALG9-IT1	1	2	0.061935
chr11	111864254	111864460	111864357	ENSG00000254949.1	+	processed_pseudogene	KNOWN	GNG5P3	1	1	0.174928
chr11	111874056	111881243	111877649	ENSG00000255561.6	-	protein_coding	KNOWN	FDXACB1	3	5	0.329275
chr11	111878935	111885975	111882455	ENSG00000137720.7	+	protein_coding	KNOWN	C11orf1	5	5	0.329275
chr11	111889199	111889474	111889336	ENSG00000176343.5	-	processed_pseudogene	KNOWN	RPL37AP8	1	1	0.329275
chr11	111908565	111923722	111916143	ENSG00000109846.7	-	protein_coding	KNOWN	CRYAB	16	5	0.415314
chr11	111912242	111914093	111913167	ENSG00000170276.5	+	protein_coding	KNOWN	HSPB2	1	2	0.453547
chr11	111912736	111926871	111919803	ENSG00000254445.1	+	protein_coding	KNOWN	HSPB2-C11orf52	2	5	0.453547
chr11	111918032	111926872	111922452	ENSG00000149300.9	+	protein_coding	KNOWN	C11orf52	4	4	0.453547
chr11	111927144	112022584	111974864	ENSG00000150764.13	+	protein_coding	KNOWN	DIXDC1	9	20	0.372735
chr11	111928400	111928508	111928454	ENSG00000238965.1	+	rRNA	KNOWN	RNA5SP351	1	1	0.453547
chr11	111945639	111946892	111946265	ENSG00000255286.2	-	processed_pseudogene	KNOWN	RP11-708L7.7	1	2	0.504730
chr11	112015307	112016124	112015715	ENSG00000255334.1	+	sense_intronic	KNOWN	RP11-708L7.6	1	2	0.281334
chr11	112024814	112064390	112044602	ENSG00000150768.15	+	protein_coding	KNOWN	DLAT	5	14	0.185074
chr11	112029858	112030367	112030112	ENSG00000230911.1	-	processed_pseudogene	KNOWN	PPIHP1	1	1	0.299039
chr11	112032499	112032598	112032548	ENSG00000238444.1	-	snRNA	KNOWN	RNU6-893P	1	1	0.305822
chr11	112036627	112036863	112036745	ENSG00000271025.1	-	processed_pseudogene	KNOWN	RP11-708L7.9	1	1	0.305822
chr11	112064010	112074274	112069142	ENSG00000150773.10	-	protein_coding	KNOWN	PIH1D2	8	6	0.119768
chr11	112074086	112085150	112079618	ENSG00000150776.17	+	protein_coding	KNOWN	C11orf57	9	7	0.311957
chr11	112084800	112086798	112085799	ENSG00000150779.11	-	protein_coding	KNOWN	TIMM8B	4	3	0.311957
chr11	112086773	112120013	112103393	ENSG00000204370.8	+	protein_coding	KNOWN	SDHD	9	5	0.266437
chr11	112086903	112193805	112140354	ENSG00000255292.6	+	protein_coding	KNOWN	AP002884.2	4	6	0.131354
chr11	112143251	112164117	112153684	ENSG00000150782.11	-	protein_coding	KNOWN	IL18	6	6	-0.009360
chr11	112165197	112172606	112168901	ENSG00000254638.1	-	antisense	KNOWN	RP11-356J5.4	1	4	-0.046332
chr11	112167372	112172559	112169965	ENSG00000150783.9	+	protein_coding	KNOWN	TEX12	2	5	-0.021991
chr11	112175467	112224699	112200083	ENSG00000197580.11	+	protein_coding	KNOWN	BCO2	19	13	0.101720
chr11	112180773	112183191	112181982	ENSG00000214264.4	+	processed_pseudogene	KNOWN	KCTD9P4	1	3	0.065025
chr11	112208601	112208898	112208749	ENSG00000255231.1	+	processed_pseudogene	KNOWN	MRPS36P4	1	1	0.261917
chr11	112218326	112218720	112218523	ENSG00000243930.1	+	processed_pseudogene	KNOWN	RPS12P21	1	1	-0.079961
chr11	112226365	112269955	112248160	ENSG00000150787.7	+	protein_coding	KNOWN	PTS	9	7	0.003099
chr11	112235371	112236025	112235698	ENSG00000243250.1	-	processed_pseudogene	KNOWN	RPS6P16	1	1	-0.113912
chr11	112247844	112247932	112247888	ENSG00000215954.2	+	miRNA	NOVEL	AP002884.1	1	1	-0.113912
chr11	112248479	112260860	112254669	ENSG00000188771.4	-	protein_coding	KNOWN	PLET1	1	4	0.104874
chr11	112260265	112261396	112260830	ENSG00000268472.2	+	antisense	KNOWN	RP11-356J5.13	1	1	0.135493
chr11	112267290	112268371	112267830	ENSG00000213234.4	-	processed_pseudogene	KNOWN	ST13P10	1	1	0.135493
chr11	112270749	112362534	112316641	ENSG00000250303.3	+	lincRNA	KNOWN	RP11-356J5.12	5	4	0.185503
chr11	112352556	112352662	112352609	ENSG00000206772.1	-	snRNA	KNOWN	RNU6-44P	1	1	0.022729
chr11	112393118	112621729	112507423	ENSG00000254968.6	+	lincRNA	KNOWN	RP11-65M17.3	3	4	-0.162826
chr11	112461468	112461920	112461694	ENSG00000213233.5	-	processed_pseudogene	KNOWN	RPL23AP62	1	1	-0.396508
chr11	112534220	112555802	112545011	ENSG00000255484.2	-	lincRNA	KNOWN	RP11-65M17.1	1	4	0.066441
chr11	112602354	112602452	112602403	ENSG00000212397.1	-	snoRNA	NOVEL	snosnR66	1	1	-0.065248
chr11	112787304	112795854	112791579	ENSG00000254626.1	+	lincRNA	KNOWN	RP11-27G22.1	1	2	-0.091812
chr11	112959279	112963460	112961369	ENSG00000247416.2	-	antisense	KNOWN	RP11-629G13.1	2	3	-0.061921
chr11	112961247	113278436	113119841	ENSG00000149294.16	+	protein_coding	KNOWN	NCAM1	30	21	-0.227753
chr11	112977353	112977420	112977386	ENSG00000238998.1	+	snRNA	KNOWN	RNU7-187P	1	1	-0.044510
chr11	113269532	113273901	113271716	ENSG00000227487.3	-	antisense	KNOWN	NCAM1-AS1	2	3	-0.122585
chr11	113278437	113314437	113296437	ENSG00000255129.5	-	antisense	KNOWN	RP11-839D17.3	3	4	-0.113324
chr11	113314529	113383544	113349036	ENSG00000149292.16	+	protein_coding	KNOWN	TTC12	22	23	-0.001179
chr11	113368478	113369117	113368797	ENSG00000270179.1	+	sense_intronic	KNOWN	RP11-159N11.4	1	1	-0.031523
chr11	113387791	113400418	113394104	ENSG00000170209.4	+	protein_coding	KNOWN	ANKK1	2	8	0.008164
chr11	113405321	113412117	113408719	ENSG00000256757.1	+	antisense	KNOWN	RP11-159N11.3	1	4	0.082848
chr11	113409615	113475691	113442653	ENSG00000149295.13	-	protein_coding	KNOWN	DRD2	10	8	0.157582
chr11	113450023	113450088	113450055	ENSG00000265140.1	-	miRNA	KNOWN	MIR4301	1	1	-0.086345
chr11	113687550	113706373	113696961	ENSG00000166682.10	-	protein_coding	KNOWN	TMPRSS5	12	13	0.137299
chr11	113711720	113712398	113712059	ENSG00000256091.1	+	processed_pseudogene	KNOWN	MTRF1LP1	1	1	-0.027307
chr11	113733187	113773811	113753499	ENSG00000086827.8	-	protein_coding	KNOWN	ZW10	3	16	-0.219374
chr11	113751116	113751286	113751201	ENSG00000243353.1	-	processed_pseudogene	KNOWN	RP11-667M19.1	1	1	-0.444061
chr11	113769660	113769994	113769827	ENSG00000257070.1	+	processed_pseudogene	KNOWN	RP11-667M19.4	1	1	-0.444061
chr11	113770393	113771691	113771042	ENSG00000256603.1	-	antisense	KNOWN	RP11-667M19.2	1	2	-0.059074
chr11	113779747	113780500	113780123	ENSG00000228607.2	+	protein_coding	KNOWN	CLDN25	1	1	-0.059074
chr11	113789231	113791366	113790298	ENSG00000256167.1	+	transcribed_processed_pseudogene	KNOWN	ATF4P4	2	1	0.166004
chr11	113789242	113790027	113789634	ENSG00000255870.1	+	processed_pseudogene	KNOWN	RP11-667M19.5	1	1	-0.046535
chr11	113791466	113791752	113791609	ENSG00000257101.1	+	processed_pseudogene	KNOWN	LRRC37A13P	1	1	0.292456
chr11	113797874	113875570	113836722	ENSG00000048028.11	-	protein_coding	KNOWN	USP28	15	25	0.033585
chr11	113818077	113822458	113820267	ENSG00000256452.1	+	antisense	KNOWN	RP11-667M19.10	1	3	-0.175941
chr11	113820856	113821885	113821370	ENSG00000255710.2	-	processed_pseudogene	KNOWN	RP11-667M19.9	1	1	-0.175941
chr11	113859346	113859449	113859397	ENSG00000201687.1	+	snRNA	KNOWN	RNU6-1107P	1	1	-0.072395
chr11	113904677	113946565	113925621	ENSG00000149305.6	+	protein_coding	KNOWN	HTR3B	3	9	-0.362445
chr11	113974881	113990313	113982597	ENSG00000166736.11	+	protein_coding	KNOWN	HTR3A	7	9	0.004550
chr11	114059593	114250676	114155134	ENSG00000109906.13	+	protein_coding	KNOWN	ZBTB16	9	7	0.177197
chr11	114086811	114086929	114086870	ENSG00000221112.1	-	miRNA	NOVEL	AP000908.1	1	1	0.234244
chr11	114210616	114356571	114283593	ENSG00000256947.1	-	antisense	KNOWN	RP11-64D24.2	1	3	0.197233
chr11	114257787	114313285	114285536	ENSG00000166741.7	+	protein_coding	KNOWN	NNMT	8	5	0.283859
chr11	114312063	114312207	114312135	ENSG00000280653.1	+	miRNA	NOVEL	AP002518.1	1	1	0.454562
chr11	114360635	114380045	114370340	ENSG00000256195.2	-	antisense	KNOWN	RP11-64D24.4	1	3	0.015354
chr11	114391443	114400550	114395996	ENSG00000180425.10	-	protein_coding	KNOWN	C11orf71	3	2	-0.054850
chr11	114399960	114400331	114400145	ENSG00000282682.1	-	protein_coding	KNOWN	C11orf71	1	1	-0.054850
chr11	114400030	114414203	114407116	ENSG00000076053.10	+	protein_coding	KNOWN	RBM7	9	5	-0.003583
chr11	114400682	114443932	114422307	ENSG00000255663.1	+	protein_coding	KNOWN	RP11-212D19.4	1	7	0.072380
chr11	114439386	114450279	114444832	ENSG00000076043.9	+	protein_coding	KNOWN	REXO2	20	7	0.086348
chr11	114453064	114454123	114453593	ENSG00000256533.1	+	processed_pseudogene	KNOWN	RP11-212D19.5	1	1	-0.127575
chr11	114512706	114513431	114513068	ENSG00000255982.1	-	processed_pseudogene	KNOWN	NXPE2P1	1	1	-0.249625
chr11	114517864	114518371	114518117	ENSG00000270204.1	+	processed_pseudogene	KNOWN	RP11-172C16.5	1	1	-0.249625
chr11	114521715	114559895	114540805	ENSG00000095110.7	-	protein_coding	KNOWN	NXPE1	6	9	-0.197510
chr11	114527129	114527232	114527180	ENSG00000238724.1	+	snoRNA	NOVEL	snoU13	1	1	-0.249625
chr11	114570591	114595762	114583176	ENSG00000137634.9	-	protein_coding	KNOWN	NXPE4	2	6	-0.241825
chr11	114583253	114584692	114583972	ENSG00000256674.1	+	processed_pseudogene	KNOWN	RP11-172C16.4	1	1	-0.259772
chr11	114678386	114706933	114692659	ENSG00000204361.8	+	protein_coding	KNOWN	NXPE2	1	6	-0.306760
chr11	115128218	115128373	115128295	ENSG00000252870.1	-	snoRNA	NOVEL	ACA59	1	1	-0.085546
chr11	115169218	115504957	115337087	ENSG00000182985.16	-	protein_coding	KNOWN	CADM1	25	12	-0.392111
chr11	115333577	115340262	115336919	ENSG00000256972.1	+	lincRNA	KNOWN	AP000462.3	1	2	-0.271820
chr11	115363629	115377931	115370780	ENSG00000255580.1	+	lincRNA	KNOWN	AP000462.2	1	2	-0.463332
chr11	115396756	115397658	115397207	ENSG00000256315.1	+	processed_transcript	KNOWN	AP000462.1	3	2	-0.360076
chr11	115532322	115532953	115532637	ENSG00000256281.1	-	lincRNA	KNOWN	RP11-136I14.2	1	2	-0.140669
chr11	115538869	115539384	115539126	ENSG00000257087.1	-	processed_pseudogene	KNOWN	RP11-136I14.3	1	1	-0.140669
chr11	115578049	115578243	115578146	ENSG00000255903.2	+	processed_pseudogene	KNOWN	RPL12P46	1	1	-0.061718
chr11	115582297	115600339	115591318	ENSG00000255689.1	+	lincRNA	KNOWN	RP11-136I14.5	1	3	-0.133216
chr11	115627082	115627185	115627133	ENSG00000239153.1	-	snoRNA	NOVEL	snoU13	1	1	-0.036838
chr11	115628065	115629743	115628904	ENSG00000255599.1	+	lincRNA	KNOWN	AP000997.1	1	3	-0.036838
chr11	115638563	115646962	115642762	ENSG00000260254.1	+	lincRNA	KNOWN	AP000997.2	1	1	-0.156829
chr11	115659168	115661417	115660292	ENSG00000279771.1	+	TEC	KNOWN	AP000997.3	1	1	0.184185
chr11	115659658	115843146	115751402	ENSG00000256717.1	+	lincRNA	KNOWN	AP000797.3	1	3	-0.037050
chr11	115731942	115734742	115733342	ENSG00000279818.1	-	TEC	KNOWN	CTC-774J1.1	1	1	-0.102824
chr11	115754248	115760627	115757437	ENSG00000246100.3	-	lincRNA	KNOWN	LINC00900	6	3	0.242326
chr11	115932774	115942995	115937884	ENSG00000257067.5	+	lincRNA	KNOWN	AP000797.4	2	4	-0.147835
chr11	115938736	115938824	115938780	ENSG00000281717.1	-	miRNA	NOVEL	AP000797.5	1	1	-0.147835
chr11	115950196	115950801	115950498	ENSG00000244259.1	-	processed_pseudogene	KNOWN	AP000797.1	1	1	-0.189190
chr11	115951105	115951491	115951298	ENSG00000239600.1	-	processed_pseudogene	KNOWN	AP000797.2	1	1	-0.189190
chr11	116496899	116500630	116498764	ENSG00000236437.1	-	lincRNA	KNOWN	AP001891.1	1	2	0.196689
chr11	116609995	116610094	116610044	ENSG00000278945.1	-	TEC	KNOWN	AP000770.2	1	1	-0.086445
chr11	116639422	116658252	116648837	ENSG00000237937.5	+	lincRNA	KNOWN	AP000770.1	2	3	0.056822
chr11	116748170	116772988	116760579	ENSG00000137656.11	-	protein_coding	KNOWN	BUD13	3	10	0.137221
chr11	116773389	116774205	116773797	ENSG00000226645.1	+	antisense	KNOWN	AP006216.10	1	2	0.359339
chr11	116773799	116788050	116780924	ENSG00000109917.10	-	protein_coding	KNOWN	ZPR1	9	14	0.359339
chr11	116789367	116792420	116790893	ENSG00000110243.11	-	protein_coding	KNOWN	APOA5	3	4	0.639508
chr11	116813204	116814003	116813603	ENSG00000236267.1	-	antisense	KNOWN	AP006216.5	1	2	0.315618
chr11	116820700	116823306	116822003	ENSG00000110244.6	-	protein_coding	KNOWN	APOA4	1	3	0.315618
chr11	116829706	116833072	116831389	ENSG00000110245.11	+	protein_coding	KNOWN	APOC3	5	4	0.691297
chr11	116835751	116837950	116836850	ENSG00000118137.9	-	protein_coding	KNOWN	APOA1	5	4	0.727117
chr11	116836117	116855729	116845923	ENSG00000235910.1	+	antisense	KNOWN	APOA1-AS	1	2	0.693724
chr11	116843402	117098437	116970919	ENSG00000160584.15	-	protein_coding	KNOWN	SIK3	13	25	0.295310
chr11	117015430	117015529	117015479	ENSG00000264344.1	-	miRNA	NOVEL	AP000936.2	1	1	0.308415
chr11	117015897	117015992	117015944	ENSG00000200537.1	+	misc_RNA	KNOWN	RNY4P6	1	1	0.308415
chr11	117035797	117036051	117035924	ENSG00000234268.1	-	processed_pseudogene	KNOWN	AP000936.1	1	1	0.012023
chr11	117098987	117108170	117103578	ENSG00000224077.1	+	antisense	KNOWN	AP000936.4	1	3	0.313206
chr11	117117794	117119181	117118487	ENSG00000225236.1	-	processed_pseudogene	KNOWN	AP000936.5	1	3	0.491456
chr11	117135528	117138582	117137055	ENSG00000254851.1	+	unprocessed_pseudogene	KNOWN	RP11-109L13.1	1	5	0.707456
chr11	117143891	117144191	117144041	ENSG00000254678.1	-	processed_pseudogene	KNOWN	RP11-109L13.5	1	1	0.707456
chr11	117144267	117176894	117160580	ENSG00000168092.13	+	protein_coding	KNOWN	PAFAH1B2	8	7	0.591122
chr11	117178733	117197445	117188089	ENSG00000149577.15	+	protein_coding	KNOWN	SIDT2	20	27	0.736495
chr11	117199321	117204782	117202051	ENSG00000149591.16	+	protein_coding	KNOWN	TAGLN	8	6	1.137144
chr11	117204337	117232525	117218431	ENSG00000160613.12	-	protein_coding	KNOWN	PCSK7	15	17	1.292905
chr11	117204967	117210292	117207629	ENSG00000280143.1	+	TEC	KNOWN	AP000892.6	1	1	1.150520
chr11	117232625	117286445	117259535	ENSG00000167257.10	+	protein_coding	KNOWN	RNF214	8	15	0.637047
chr11	117263799	117263952	117263875	ENSG00000252992.1	+	scaRNA	NOVEL	SCARNA11	1	1	0.476815
chr11	117285207	117316259	117300733	ENSG00000186318.16	-	protein_coding	KNOWN	BACE1	12	9	0.671010
chr11	117290874	117293571	117292222	ENSG00000278768.1	+	antisense	KNOWN	BACE1-AS	2	4	0.704969
chr11	117297005	117297328	117297166	ENSG00000276505.1	-	sense_intronic	KNOWN	CMB9-94B1.2	1	1	0.704969
chr11	117314557	117413268	117363912	ENSG00000110274.14	+	protein_coding	KNOWN	CEP164	13	33	0.547864
chr11	117316362	117328038	117322200	ENSG00000250699.1	-	antisense	KNOWN	AP000892.4	1	3	0.692896
chr11	117336256	117336631	117336443	ENSG00000271412.1	-	processed_pseudogene	KNOWN	PRR13P3	1	1	0.403700
chr11	117427773	117817525	117622649	ENSG00000177103.13	-	protein_coding	KNOWN	DSCAML1	3	33	0.227400
chr11	117611101	117612017	117611559	ENSG00000279586.1	-	TEC	KNOWN	AP000711.1	1	1	0.347249
chr11	117668483	117668858	117668670	ENSG00000270403.1	+	lincRNA	KNOWN	RP11-35P15.1	1	1	0.473346
chr11	117800844	117828698	117814771	ENSG00000137731.13	-	protein_coding	KNOWN	FXYD2	8	7	0.289999
chr11	117818443	117821992	117820217	ENSG00000254844.4	+	antisense	KNOWN	RP11-728F11.3	1	3	0.328432
chr11	117820163	117876667	117848415	ENSG00000255245.4	-	protein_coding	KNOWN	FXYD6-FXYD2	2	11	0.219428
chr11	117833719	117838942	117836330	ENSG00000254528.7	+	antisense	KNOWN	RP11-728F11.4	3	3	0.575139
chr11	117836976	117877486	117857231	ENSG00000137726.16	-	protein_coding	KNOWN	FXYD6	17	10	0.130294
chr11	117900643	117929459	117915051	ENSG00000137747.14	-	protein_coding	KNOWN	TMPRSS13	8	16	0.254600
chr11	117986348	118001483	117993915	ENSG00000110324.9	+	protein_coding	KNOWN	IL10RA	11	8	0.052828
chr11	118002348	118003037	118002692	ENSG00000280008.1	+	TEC	KNOWN	RP11-652L8.4	1	1	0.084760
chr11	118015772	118086793	118051282	ENSG00000255274.8	-	antisense	KNOWN	TMPRSS4-AS1	3	4	0.137510
chr11	118025369	118029863	118027616	ENSG00000279906.1	-	protein_coding	KNOWN	AP002962.1	1	3	0.319884
chr11	118067237	118067539	118067388	ENSG00000272075.2	+	misc_RNA	KNOWN	RN7SL828P	1	1	0.199476
chr11	118077012	118121890	118099451	ENSG00000137648.16	+	protein_coding	KNOWN	TMPRSS4	21	14	0.279543
chr11	118133377	118152888	118143132	ENSG00000177098.8	-	protein_coding	KNOWN	SCN4B	6	5	0.378767
chr11	118161951	118176673	118169312	ENSG00000149575.5	-	protein_coding	KNOWN	SCN2B	1	4	0.538811
chr11	118193740	118225094	118209417	ENSG00000160593.17	-	protein_coding	KNOWN	AMICA1	12	10	-0.139729
chr11	118208932	118209211	118209071	ENSG00000255163.1	-	processed_pseudogene	KNOWN	HSPE1P18	1	1	-0.057644
chr11	118226690	118252350	118239520	ENSG00000160588.9	-	protein_coding	KNOWN	MPZL3	4	6	-0.111102
chr11	118253403	118264536	118258969	ENSG00000149573.8	-	protein_coding	KNOWN	MPZL2	7	6	-0.212863
chr11	118264593	118266817	118265705	ENSG00000280032.1	+	TEC	KNOWN	RP11-832A4.7	1	1	-0.212863
chr11	118304545	118316175	118310360	ENSG00000198851.9	+	protein_coding	KNOWN	CD3E	6	9	-0.064109
chr11	118322789	118323083	118322936	ENSG00000254992.1	-	processed_pseudogene	KNOWN	RP11-215H18.5	1	1	0.108202
chr11	118338954	118342744	118340849	ENSG00000167286.9	-	protein_coding	KNOWN	CD3D	5	5	0.233720
chr11	118344344	118355161	118349752	ENSG00000160654.9	+	protein_coding	KNOWN	CD3G	7	8	0.154891
chr11	118359585	118399211	118379398	ENSG00000110344.9	+	protein_coding	KNOWN	UBE4A	3	20	0.082348
chr11	118397095	118401895	118399495	ENSG00000254873.1	-	antisense	KNOWN	RP11-770J1.5	2	2	0.162381
chr11	118401154	118431496	118416325	ENSG00000167283.7	+	protein_coding	KNOWN	ATP5L	8	5	0.164610
chr11	118415977	118416521	118416249	ENSG00000269944.1	+	sense_intronic	KNOWN	RP11-770J1.7	1	1	0.140901
chr11	118433121	118435206	118434163	ENSG00000255384.1	-	lincRNA	KNOWN	RP11-770J1.4	1	1	0.494538
chr11	118436490	118526832	118481661	ENSG00000118058.20	+	protein_coding	KNOWN	KMT2A	14	36	0.470249
chr11	118511911	118531094	118521502	ENSG00000255435.6	-	antisense	KNOWN	RP11-770J1.3	5	4	0.526141
chr11	118527472	118531197	118529334	ENSG00000172425.10	+	protein_coding	KNOWN	TTC36	3	4	0.597136
chr11	118531041	118547280	118539160	ENSG00000149582.15	+	protein_coding	KNOWN	TMEM25	30	9	0.779204
chr11	118544528	118572970	118558749	ENSG00000118096.7	-	protein_coding	KNOWN	IFT46	12	13	0.749410
chr11	118560690	118561580	118561135	ENSG00000243431.1	+	processed_pseudogene	KNOWN	RPL5P30	1	1	0.792432
chr11	118572390	118603033	118587711	ENSG00000095139.13	+	protein_coding	KNOWN	ARCN1	5	11	0.594484
chr11	118593988	118594093	118594040	ENSG00000207185.1	+	snRNA	KNOWN	RNU6-1157P	1	1	0.850571
chr11	118606440	118658038	118632239	ENSG00000019144.16	+	protein_coding	KNOWN	PHLDB1	29	24	1.113298
chr11	118636620	118638097	118637358	ENSG00000255176.1	+	antisense	KNOWN	AP002954.3	1	2	1.087934
chr11	118644000	118644079	118644039	ENSG00000275466.1	+	miRNA	KNOWN	MIR6716	1	1	1.087934
chr11	118657316	118679690	118668503	ENSG00000118094.11	-	protein_coding	KNOWN	TREH	5	15	1.060172
chr11	118688039	118690600	118689319	ENSG00000255239.1	-	unprocessed_pseudogene	KNOWN	TREHP1	1	4	0.859666
chr11	118702342	118702447	118702394	ENSG00000207462.1	+	snRNA	KNOWN	RNU6-376P	1	1	0.877358
chr11	118704607	118750263	118727435	ENSG00000255422.1	+	antisense	KNOWN	AP002954.4	1	3	0.619852
chr11	118747766	118791149	118769457	ENSG00000110367.11	-	protein_coding	KNOWN	DDX6	8	14	0.653929
chr11	118791254	118793137	118792195	ENSG00000278376.1	+	lincRNA	KNOWN	RP11-158I9.8	1	1	0.762928
chr11	118821895	118822084	118821989	ENSG00000254478.1	+	processed_pseudogene	KNOWN	RP11-158I9.1	1	1	0.327921
chr11	118833846	118834556	118834201	ENSG00000254621.1	-	processed_pseudogene	KNOWN	SETP16	1	1	0.442324
chr11	118836010	118836111	118836060	ENSG00000201535.2	+	misc_RNA	NOVEL	Y_RNA	1	1	0.442324
chr11	118883766	118897799	118890782	ENSG00000160683.4	+	protein_coding	KNOWN	CXCR5	1	2	0.985097
chr11	118885841	118887742	118886791	ENSG00000245869.2	-	antisense	KNOWN	RP11-158I9.5	1	2	0.774022
chr11	118893875	118925608	118909741	ENSG00000186174.12	-	protein_coding	KNOWN	BCL9L	5	8	1.274860
chr11	118910708	118910787	118910747	ENSG00000264211.1	+	miRNA	KNOWN	MIR4492	1	1	1.399947
chr11	118925164	118958559	118941861	ENSG00000110375.2	+	protein_coding	KNOWN	UPK2	2	6	1.088563
chr11	118931216	118931490	118931353	ENSG00000239726.3	+	misc_RNA	KNOWN	RN7SL688P	1	1	1.066606
chr11	118970498	118970595	118970546	ENSG00000222529.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.564254
chr11	118971707	118981291	118976499	ENSG00000176302.12	+	protein_coding	KNOWN	FOXR1	3	7	0.564254
chr11	118994334	118994630	118994482	ENSG00000280502.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.038099
chr11	118994824	118998004	118996414	ENSG00000255121.2	-	lincRNA	KNOWN	RP11-110I1.12	2	2	1.038099
chr11	118998142	119015791	119006966	ENSG00000186166.8	+	protein_coding	KNOWN	CCDC84	10	11	0.999509
chr11	119003012	119003446	119003229	ENSG00000240970.1	-	processed_pseudogene	KNOWN	RPL23AP64	1	1	1.038099
chr11	119003742	119004893	119004317	ENSG00000254428.1	-	antisense	KNOWN	RP11-110I1.11	1	2	1.038099
chr11	119005727	119005934	119005830	ENSG00000254909.1	-	processed_pseudogene	KNOWN	RP11-110I1.5	1	1	1.038099
chr11	119015712	119018691	119017201	ENSG00000118181.10	-	protein_coding	KNOWN	RPS25	6	5	0.920511
chr11	119018432	119025454	119021943	ENSG00000196655.9	+	protein_coding	KNOWN	TRAPPC4	14	5	0.920511
chr11	119018944	119019012	119018978	ENSG00000266398.1	+	miRNA	KNOWN	MIR3656	1	1	0.920511
chr11	119024114	119030906	119027510	ENSG00000137700.16	-	protein_coding	KNOWN	SLC37A4	17	12	0.938703
chr11	119044188	119045493	119044840	ENSG00000255114.1	+	antisense	KNOWN	RP11-110I1.6	1	2	1.056741
chr11	119044189	119057202	119050695	ENSG00000149428.18	-	protein_coding	KNOWN	HYOU1	22	26	1.008088
chr11	119065263	119065677	119065470	ENSG00000271751.1	-	lincRNA	KNOWN	RP11-110I1.14	1	1	0.968844
chr11	119067374	119067698	119067536	ENSG00000272186.1	-	antisense	KNOWN	RP11-110I1.13	1	1	0.968844
chr11	119067692	119081978	119074835	ENSG00000160695.14	+	protein_coding	KNOWN	VPS11	9	16	0.800424
chr11	119084866	119093549	119089207	ENSG00000256269.6	+	protein_coding	KNOWN	HMBS	25	15	0.836379
chr11	119093854	119095467	119094660	ENSG00000188486.3	-	protein_coding	KNOWN	H2AFX	2	2	0.935266
chr11	119095051	119095191	119095121	ENSG00000281272.1	+	miRNA	NOVEL	AP003391.1	1	1	0.935266
chr11	119096503	119108331	119102417	ENSG00000172269.16	-	protein_coding	KNOWN	DPAGT1	14	11	0.935266
chr11	119102198	119118544	119110371	ENSG00000172375.12	+	protein_coding	KNOWN	C2CD2L	10	14	1.012639
chr11	119121587	119136044	119128815	ENSG00000172273.12	+	protein_coding	KNOWN	HINFP	14	10	1.008033
chr11	119149012	119162653	119155832	ENSG00000172350.9	+	protein_coding	KNOWN	ABCG4	6	15	0.873478
chr11	119166568	119184016	119175292	ENSG00000160703.15	+	protein_coding	KNOWN	NLRX1	14	10	1.060830
chr11	119185457	119190223	119187840	ENSG00000172367.15	+	protein_coding	KNOWN	PDZD3	14	11	1.106111
chr11	119189638	119196769	119193203	ENSG00000248712.7	-	protein_coding	KNOWN	CCDC153	4	8	1.084069
chr11	119206276	119308149	119257212	ENSG00000110395.5	+	protein_coding	KNOWN	CBL	4	18	0.469178
chr11	119289562	119289677	119289619	ENSG00000222249.1	-	snRNA	KNOWN	RNU6-262P	1	1	0.208805
chr11	119308529	119321521	119315025	ENSG00000076706.14	-	protein_coding	KNOWN	MCAM	17	16	0.643107
chr11	119312950	119313012	119312981	ENSG00000277325.1	-	miRNA	KNOWN	MIR6756	1	1	0.666346
chr11	119323293	119323409	119323351	ENSG00000252119.1	-	snoRNA	NOVEL	ACA64	1	1	0.666346
chr11	119334527	119337313	119335920	ENSG00000173456.4	+	protein_coding	KNOWN	RNF26	1	1	0.707921
chr11	119336249	119337309	119336779	ENSG00000245385.2	-	antisense	KNOWN	RP11-334E6.10	1	2	0.707921
chr11	119338939	119340940	119339939	ENSG00000223953.5	-	protein_coding	KNOWN	C1QTNF5	4	3	0.707921
chr11	119338942	119346673	119342807	ENSG00000235718.8	-	protein_coding	KNOWN	MFRP	6	15	0.707921
chr11	119355215	119381726	119368470	ENSG00000036672.15	-	protein_coding	KNOWN	USP2	7	13	1.004241
chr11	119372706	119381613	119377159	ENSG00000254740.2	+	antisense	KNOWN	RP11-334E6.3	2	2	1.091992
chr11	119381778	119526664	119454221	ENSG00000245248.7	+	antisense	KNOWN	USP2-AS1	5	9	0.566924
chr11	119402792	119404088	119403440	ENSG00000254590.1	+	processed_pseudogene	KNOWN	RP11-334E6.2	1	1	0.403936
chr11	119403963	119404227	119404095	ENSG00000254892.1	-	processed_pseudogene	KNOWN	RP11-334E6.4	1	1	0.403936
chr11	119417378	119424985	119421181	ENSG00000154096.13	-	protein_coding	KNOWN	THY1	10	4	0.884759
chr11	119417951	119419114	119418532	ENSG00000263873.1	+	sense_intronic	KNOWN	RP11-334E6.12	1	2	0.884759
chr11	119444991	119445519	119445255	ENSG00000255377.1	-	processed_pseudogene	KNOWN	DUXAP5	1	1	0.734179
chr11	119602875	119604306	119603590	ENSG00000230716.3	-	processed_pseudogene	KNOWN	KRT8P7	1	1	0.365010
chr11	119608423	119659284	119633853	ENSG00000254561.3	+	antisense	KNOWN	RP11-196E1.3	1	7	0.439646
chr11	119623408	119729084	119676246	ENSG00000110400.10	-	protein_coding	KNOWN	PVRL1	7	8	0.570797
chr11	119656311	119656416	119656363	ENSG00000199217.1	+	snRNA	KNOWN	RNU6-1123P	1	1	0.533782
chr11	119709920	119713925	119711922	ENSG00000255247.1	+	lincRNA	KNOWN	CTD-2523D13.1	1	3	0.514714
chr11	119729583	119739623	119734603	ENSG00000254854.1	+	antisense	KNOWN	CTD-2523D13.2	1	4	0.179064
chr11	119821304	119822129	119821716	ENSG00000254406.1	-	processed_pseudogene	KNOWN	RP11-215D10.1	1	1	0.210636
chr11	119821829	119821927	119821878	ENSG00000276827.1	-	miRNA	NOVEL	AP001994.1	1	1	0.210636
chr11	119987954	119995037	119991495	ENSG00000254863.1	-	lincRNA	KNOWN	RP11-831A10.2	3	3	0.198654
chr11	120008604	120012158	120010381	ENSG00000255216.1	-	lincRNA	KNOWN	RP11-831A10.1	1	2	0.153896
chr11	120111275	120185529	120148402	ENSG00000137699.16	-	protein_coding	KNOWN	TRIM29	21	10	0.387810
chr11	120168977	120171679	120170328	ENSG00000176984.6	+	antisense	KNOWN	AP000679.2	2	2	0.298901
chr11	120210767	120230332	120220549	ENSG00000184232.8	+	protein_coding	KNOWN	OAF	3	4	0.480890
chr11	120236640	120319944	120278292	ENSG00000137709.9	+	protein_coding	KNOWN	POU2F3	7	14	0.424802
chr11	120249759	120265932	120257845	ENSG00000259541.5	-	antisense	KNOWN	RP11-778O17.4	2	8	0.335979
chr11	120325129	120333682	120329405	ENSG00000181264.8	+	protein_coding	KNOWN	TMEM136	5	4	0.407017
chr11	120336914	120489936	120413425	ENSG00000196914.8	+	protein_coding	KNOWN	ARHGEF12	14	41	-0.061136
chr11	120365666	120365963	120365814	ENSG00000274303.1	+	misc_RNA	NOVEL	7SK	1	1	-0.160282
chr11	120511759	120988904	120750331	ENSG00000149403.11	+	protein_coding	KNOWN	GRIK4	7	21	0.101316
chr11	120619934	120620267	120620100	ENSG00000255006.1	-	processed_pseudogene	KNOWN	TCEB1P22	1	1	0.286720
chr11	120867933	120894797	120881365	ENSG00000250493.2	-	antisense	KNOWN	RP11-640N11.2	1	2	0.096669
chr11	120936102	120936654	120936378	ENSG00000254735.1	-	processed_pseudogene	KNOWN	HMGB1P42	1	1	0.178579
chr11	120986258	120986353	120986305	ENSG00000281726.1	+	misc_RNA	NOVEL	GRIK4_3p_UTR	1	1	-0.172424
chr11	121024072	121090775	121057423	ENSG00000154114.12	+	protein_coding	KNOWN	TBCEL	10	8	-0.429071
chr11	121055207	121055275	121055241	ENSG00000281492.1	-	miRNA	NOVEL	AP000646.1	1	1	-0.695705
chr11	121101173	121191493	121146333	ENSG00000109927.9	+	protein_coding	KNOWN	TECTA	3	24	-0.001685
chr11	121238304	121238688	121238496	ENSG00000254515.1	+	processed_pseudogene	KNOWN	RP11-775A1.2	1	1	-0.219210
chr11	121250270	121250978	121250624	ENSG00000244400.2	-	processed_pseudogene	KNOWN	RPS4XP12	1	1	-0.197515
chr11	121292453	121308694	121300573	ENSG00000109929.9	+	protein_coding	KNOWN	SC5D	9	6	-0.183643
chr11	121361854	121362865	121362359	ENSG00000232460.4	-	processed_pseudogene	KNOWN	BMPR1APS2	1	1	-0.077933
chr11	121426645	121427416	121427030	ENSG00000271022.1	-	processed_pseudogene	KNOWN	RP11-142I2.1	1	1	-0.105241
chr11	121447331	121453013	121450172	ENSG00000246790.2	-	antisense	KNOWN	RP11-730K11.1	2	2	-0.050455
chr11	121452203	121633693	121542948	ENSG00000137642.12	+	protein_coding	KNOWN	SORL1	13	48	-0.019200
chr11	122004355	122004451	122004403	ENSG00000252556.1	+	snRNA	KNOWN	RNU6-256P	1	1	0.007928
chr11	122028355	122116323	122072339	ENSG00000255248.6	-	sense_overlapping	KNOWN	RP11-166D19.1	14	4	-0.003160
chr11	122099757	122099844	122099800	ENSG00000207971.1	-	miRNA	KNOWN	MIR125B1	1	1	-0.193917
chr11	122115354	122116215	122115784	ENSG00000259571.1	-	protein_coding	KNOWN	BLID	1	1	0.135061
chr11	122146521	122146593	122146557	ENSG00000198975.1	-	miRNA	KNOWN	MIRLET7A2	1	1	0.175893
chr11	122152229	122152308	122152268	ENSG00000207994.1	-	miRNA	KNOWN	MIR100	1	1	0.091992
chr11	122155422	122422871	122289146	ENSG00000255090.5	-	lincRNA	KNOWN	MIR100HG	8	4	0.026755
chr11	122294938	122301763	122298350	ENSG00000255015.1	-	lincRNA	KNOWN	RP11-716H6.1	1	2	-0.028302
chr11	122295190	122308019	122301604	ENSG00000255219.1	+	antisense	KNOWN	RP11-716H6.2	1	3	-0.028302
chr11	122449210	122449331	122449270	ENSG00000252776.1	+	snRNA	KNOWN	RNU4ATAC10P	1	1	0.168444
chr11	122451474	122451599	122451536	ENSG00000253035.1	+	snRNA	KNOWN	RNU4ATAC5P	1	1	-0.219952
chr11	122579205	122579307	122579256	ENSG00000223265.1	-	snRNA	KNOWN	RNU6-592P	1	1	0.067744
chr11	122613444	122614486	122613965	ENSG00000254572.2	-	processed_pseudogene	KNOWN	GLULP3	1	1	0.207469
chr11	122618851	122619274	122619062	ENSG00000254935.1	+	processed_pseudogene	KNOWN	RP11-266E8.2	1	1	0.207469
chr11	122655675	122814473	122735074	ENSG00000154127.9	+	protein_coding	KNOWN	UBASH3B	8	14	0.368255
chr11	122726208	122726311	122726259	ENSG00000239079.1	-	snoRNA	NOVEL	snoU13	1	1	0.385906
chr11	122838500	122872639	122855569	ENSG00000109943.8	+	protein_coding	KNOWN	CRTAM	3	10	0.060326
chr11	122882528	122959798	122921163	ENSG00000109944.10	+	protein_coding	KNOWN	C11orf63	4	9	0.043025
chr11	122927034	122927173	122927103	ENSG00000199709.1	+	snRNA	KNOWN	RNU4-23P	1	1	0.056147
chr11	122960327	122961086	122960706	ENSG00000254944.1	+	processed_pseudogene	KNOWN	ATP5F1P5	1	1	-0.074827
chr11	122977570	122981720	122979645	ENSG00000188909.4	-	protein_coding	KNOWN	BSX	1	3	-0.016785
chr11	123017638	123018661	123018149	ENSG00000213184.3	+	processed_pseudogene	KNOWN	RP11-335F8.2	1	1	0.198344
chr11	123035867	123036224	123036045	ENSG00000243669.2	+	processed_pseudogene	KNOWN	RPL34P23	1	1	0.130881
chr11	123049787	123050353	123050070	ENSG00000244641.2	-	processed_pseudogene	KNOWN	RPS26P43	1	2	0.250413
chr11	123051161	123051401	123051281	ENSG00000233541.4	+	processed_pseudogene	KNOWN	RPL31P47	1	1	0.321997
chr11	123057489	123063230	123060359	ENSG00000109971.13	-	protein_coding	KNOWN	HSPA8	24	9	0.321997
chr11	123058077	123058161	123058119	ENSG00000200879.1	-	snoRNA	KNOWN	SNORD14E	1	1	0.321997
chr11	123058909	123058995	123058952	ENSG00000207118.1	-	snoRNA	KNOWN	SNORD14D	1	1	0.321997
chr11	123059335	123059422	123059378	ENSG00000202252.1	-	snoRNA	KNOWN	SNORD14C	1	1	0.321997
chr11	123069865	123195281	123132573	ENSG00000166250.11	-	protein_coding	KNOWN	CLMP	4	7	0.456811
chr11	123135923	123136376	123136149	ENSG00000255342.1	-	processed_pseudogene	KNOWN	RP11-762B21.5	1	1	0.369977
chr11	123188802	123228277	123208539	ENSG00000254710.1	+	antisense	KNOWN	CTD-2216M2.1	1	5	0.614939
chr11	123301390	123301523	123301456	ENSG00000200496.1	+	snoRNA	NOVEL	U8	1	1	0.330649
chr11	123313674	123314770	123314222	ENSG00000254823.1	-	lincRNA	KNOWN	RP11-109E10.1	2	3	0.098878
chr11	123340174	123340714	123340444	ENSG00000254407.1	-	processed_pseudogene	KNOWN	PHBP17	1	1	0.008576
chr11	123381440	123381512	123381476	ENSG00000265357.1	-	miRNA	KNOWN	MIR4493	1	1	0.075216
chr11	123430737	123435710	123433223	ENSG00000254667.2	+	transcribed_unprocessed_pseudogene	KNOWN	AP000783.1	2	2	0.357516
chr11	123454398	123627774	123541086	ENSG00000023171.14	+	protein_coding	KNOWN	GRAMD1B	12	21	0.310208
chr11	123597946	123599452	123598699	ENSG00000254449.1	-	processed_pseudogene	KNOWN	SF3A3P2	1	1	0.452081
chr11	123629187	123655244	123642215	ENSG00000166257.8	-	protein_coding	KNOWN	SCN3B	6	7	0.309477
chr11	123668499	123671637	123670068	ENSG00000254467.1	+	lincRNA	KNOWN	RP11-634B22.4	1	2	-0.011511
chr11	123708673	123708770	123708721	ENSG00000266814.1	-	miRNA	NOVEL	AP000868.1	1	1	-0.070859
chr11	123724177	123741675	123732926	ENSG00000166261.10	-	protein_coding	KNOWN	ZNF202	9	9	-0.036563
chr11	123753488	123754545	123754016	ENSG00000221931.2	-	protein_coding	KNOWN	OR6X1	1	1	-0.110501
chr11	123763927	123764089	123764008	ENSG00000200197.1	+	snRNA	KNOWN	RNU1-21P	1	1	-0.110501
chr11	123805335	123806387	123805861	ENSG00000196099.4	-	protein_coding	KNOWN	OR6M1	1	1	-0.391687
chr11	123841006	123841876	123841441	ENSG00000254613.1	-	unprocessed_pseudogene	KNOWN	OR6M2P	1	1	-0.186724
chr11	123861822	123862521	123862171	ENSG00000254430.1	-	unprocessed_pseudogene	KNOWN	OR6M3P	1	1	-0.243192
chr11	123882926	123885642	123884284	ENSG00000204300.6	-	protein_coding	KNOWN	TMEM225	2	4	-0.304767
chr11	123906146	123907476	123906811	ENSG00000181518.3	+	protein_coding	KNOWN	OR8D4	1	1	-0.096212
chr11	123939543	123940637	123940090	ENSG00000171014.2	+	protein_coding	KNOWN	OR4D5	1	1	-0.497297
chr11	123942785	123943873	123943329	ENSG00000181499.2	-	protein_coding	KNOWN	OR6T1	1	1	-0.497297
chr11	123976661	123977781	123977221	ENSG00000196248.4	-	protein_coding	KNOWN	OR10S1	1	1	-0.662356
chr11	123994163	123995161	123994662	ENSG00000198674.3	-	protein_coding	KNOWN	OR10G6	1	1	-0.094104
chr11	124009655	124010012	124009833	ENSG00000226461.3	+	unprocessed_pseudogene	KNOWN	OR10G5P	1	1	-0.099122
chr11	124015575	124016510	124016042	ENSG00000254737.1	+	protein_coding	KNOWN	OR10G4	1	1	-0.231898
chr11	124023013	124023948	124023480	ENSG00000236981.1	+	protein_coding	KNOWN	OR10G9	1	1	-0.231898
chr11	124029590	124030634	124030112	ENSG00000234560.3	+	protein_coding	KNOWN	OR10G8	1	1	-0.404961
chr11	124038066	124039010	124038538	ENSG00000182634.7	-	protein_coding	KNOWN	OR10G7	1	1	-0.516430
chr11	124054870	124055707	124055288	ENSG00000213182.3	+	unprocessed_pseudogene	KNOWN	OR10D5P	1	1	-0.722976
chr11	124093582	124094532	124094057	ENSG00000186268.3	-	unprocessed_pseudogene	KNOWN	OR10D4P	1	1	-0.534391
chr11	124105100	124105968	124105534	ENSG00000213181.2	-	unprocessed_pseudogene	KNOWN	OR10N1P	1	1	-0.534391
chr11	124115362	124147721	124131541	ENSG00000110002.15	+	protein_coding	KNOWN	VWA5A	6	19	-0.296926
chr11	124158421	124159356	124158888	ENSG00000196403.4	+	unprocessed_pseudogene	KNOWN	OR10D1P	1	1	-0.557822
chr11	124185216	124186245	124185730	ENSG00000197309.2	+	protein_coding	KNOWN	OR10D3	1	1	-0.310767
chr11	124207183	124208112	124207647	ENSG00000239426.4	+	unprocessed_pseudogene	KNOWN	OR8F1P	1	1	-0.456629
chr11	124214767	124215687	124215227	ENSG00000255425.4	+	unprocessed_pseudogene	KNOWN	OR8G3P	1	1	-0.286520
chr11	124224732	124225639	124225185	ENSG00000181214.7	+	unprocessed_pseudogene	KNOWN	OR8G2P	1	1	-0.286520
chr11	124238420	124239486	124238953	ENSG00000276316.1	+	unprocessed_pseudogene	KNOWN	OR8G7P	1	2	-0.740898
chr11	124249676	124250611	124250143	ENSG00000197849.5	+	protein_coding	KNOWN	OR8G1	1	1	-0.658306
chr11	124264827	124265867	124265347	ENSG00000255298.2	+	protein_coding	KNOWN	OR8G5	1	1	-0.614716
chr11	124273970	124274581	124274275	ENSG00000255116.2	+	processed_pseudogene	KNOWN	SLC5A4P1	1	1	-0.513729
chr11	124309812	124310837	124310324	ENSG00000196341.2	-	protein_coding	KNOWN	OR8D1	1	1	-0.690321
chr11	124319238	124320288	124319763	ENSG00000279116.1	-	polymorphic_pseudogene	KNOWN	OR8D2	2	1	-0.734360
chr11	124319262	124320197	124319729	ENSG00000197263.3	-	protein_coding	KNOWN	OR8D2	1	1	-0.734360
chr11	124324871	124325789	124325330	ENSG00000254976.1	-	unprocessed_pseudogene	KNOWN	OR8B7P	1	1	-0.734360
chr11	124338783	124339662	124339222	ENSG00000255225.1	-	unprocessed_pseudogene	KNOWN	OR8B6P	1	1	-0.360975
chr11	124357560	124358469	124358014	ENSG00000255030.1	-	unprocessed_pseudogene	KNOWN	OR8B5P	1	1	-0.437476
chr11	124365634	124366551	124366092	ENSG00000227737.2	-	unprocessed_pseudogene	KNOWN	OR8B1P	1	1	-0.437476
chr11	124376877	124377801	124377339	ENSG00000229254.1	-	unprocessed_pseudogene	KNOWN	OR8C1P	1	1	-0.719247
chr11	124382395	124383362	124382878	ENSG00000204293.2	-	protein_coding	KNOWN	OR8B2	1	1	-0.719247
chr11	124396382	124397368	124396875	ENSG00000196661.3	-	protein_coding	KNOWN	OR8B3	1	1	-0.411246
chr11	124404234	124405102	124404668	ENSG00000255048.1	-	unprocessed_pseudogene	KNOWN	OR8X1P	1	1	-0.411246
chr11	124423904	124424893	124424398	ENSG00000280090.1	-	polymorphic_pseudogene	KNOWN	OR8B4	2	1	-0.406462
chr11	124423942	124424871	124424406	ENSG00000198657.5	-	protein_coding	KNOWN	OR8B4	1	1	-0.406462
chr11	124440126	124441158	124440642	ENSG00000197125.2	-	protein_coding	KNOWN	OR8B8	1	1	-0.411119
chr11	124460534	124461485	124461009	ENSG00000255510.1	+	unprocessed_pseudogene	KNOWN	OR8A2P	1	1	-0.278846
chr11	124480999	124481923	124481461	ENSG00000229386.2	-	unprocessed_pseudogene	KNOWN	OR8B9P	1	1	0.091992
chr11	124516311	124517242	124516776	ENSG00000254646.1	-	unprocessed_pseudogene	KNOWN	OR8B10P	1	1	-0.307278
chr11	124531625	124531910	124531767	ENSG00000255315.1	+	unprocessed_pseudogene	KNOWN	OR8A3P	1	1	-0.523667
chr11	124538500	124539334	124538917	ENSG00000254937.1	-	unprocessed_pseudogene	KNOWN	RP11-728D14.6	1	1	-0.523667
chr11	124542682	124543679	124543180	ENSG00000170953.2	-	protein_coding	KNOWN	OR8B12	1	1	-0.523667
chr11	124569997	124571142	124570569	ENSG00000196119.6	+	protein_coding	KNOWN	OR8A1	1	1	-0.280948
chr11	124601584	124602238	124601911	ENSG00000255341.1	+	unprocessed_pseudogene	KNOWN	OR8Q1P	1	1	0.003334
chr11	124611490	124620356	124615923	ENSG00000154143.2	+	protein_coding	KNOWN	PANX3	1	4	-0.312850
chr11	124622836	124635398	124629117	ENSG00000154144.12	+	protein_coding	KNOWN	TBRG1	10	9	-0.180586
chr11	124633113	124695707	124664410	ENSG00000110013.12	-	protein_coding	KNOWN	SIAE	6	12	-0.074148
chr11	124636459	124636592	124636525	ENSG00000200278.1	+	rRNA	KNOWN	RNA5SP352	1	1	-0.005107
chr11	124636491	124636552	124636521	ENSG00000280773.1	+	miRNA	NOVEL	AP001524.1	1	1	-0.005107
chr11	124673798	124697518	124685658	ENSG00000064199.6	+	protein_coding	KNOWN	SPA17	4	5	-0.079609
chr11	124739846	124747210	124743528	ENSG00000154146.12	+	protein_coding	KNOWN	NRGN	2	4	0.429687
chr11	124744634	124746337	124745485	ENSG00000255045.1	-	antisense	KNOWN	RP11-677M14.2	1	3	0.429687
chr11	124747472	124752238	124749855	ENSG00000019102.11	-	protein_coding	KNOWN	VSIG2	2	7	0.502559
chr11	124752583	124762290	124757436	ENSG00000149564.11	-	protein_coding	KNOWN	ESAM	6	7	0.584804
chr11	124759129	124765936	124762532	ENSG00000250073.2	+	antisense	KNOWN	RP11-677M14.3	2	2	0.584804
chr11	124766498	124800673	124783585	ENSG00000120458.10	-	protein_coding	KNOWN	MSANTD2	7	4	0.228835
chr11	124789244	124790069	124789656	ENSG00000279342.1	-	protein_coding	KNOWN	AP000866.1	1	1	0.208353
chr11	124791228	124791660	124791444	ENSG00000254509.1	+	processed_pseudogene	KNOWN	RP11-677M14.6	1	1	0.138285
chr11	124800450	124834487	124817468	ENSG00000245498.6	+	antisense	KNOWN	RP11-677M14.7	2	5	-0.046652
chr11	124807822	124808269	124808045	ENSG00000254941.1	-	processed_pseudogene	KNOWN	RP11-677M14.5	1	1	0.138285
chr11	124865386	124881470	124873428	ENSG00000154134.14	+	protein_coding	KNOWN	ROBO3	21	28	0.352903
chr11	124883691	124898500	124891095	ENSG00000154133.14	-	protein_coding	KNOWN	ROBO4	10	18	0.462191
chr11	124883691	124887789	124885740	ENSG00000254568.1	+	antisense	KNOWN	RP11-664I21.5	1	2	0.412359
chr11	124891304	124892126	124891715	ENSG00000254943.1	+	antisense	KNOWN	RP11-664I21.6	1	2	0.499167
chr11	124919193	124936412	124927802	ENSG00000165478.6	-	protein_coding	KNOWN	HEPACAM	3	7	0.071143
chr11	124919244	124920677	124919960	ENSG00000221932.6	+	protein_coding	KNOWN	HEPN1	1	1	-0.063127
chr11	124954121	125041489	124997805	ENSG00000149548.14	+	protein_coding	KNOWN	CCDC15	4	16	-0.262278
chr11	125063067	125090312	125076689	ENSG00000134955.11	+	protein_coding	KNOWN	SLC37A2	6	19	0.152804
chr11	125096545	125111763	125104154	ENSG00000150433.9	-	protein_coding	KNOWN	TMEM218	17	7	0.295854
chr11	125113161	125126781	125119971	ENSG00000187686.4	+	transcribed_processed_pseudogene	KNOWN	KRT18P59	2	2	-0.135814
chr11	125132847	125139587	125136217	ENSG00000255475.1	-	lincRNA	KNOWN	RP11-687M24.4	1	2	0.170847
chr11	125158461	125164609	125161535	ENSG00000254880.1	-	lincRNA	KNOWN	PKNOX2-AS1	1	3	-0.021665
chr11	125164687	125433389	125299038	ENSG00000165495.15	+	protein_coding	KNOWN	PKNOX2	14	13	0.137869
chr11	125188115	125191404	125189759	ENSG00000259290.1	+	sense_intronic	KNOWN	RP11-687M24.7	2	3	0.139938
chr11	125258626	125266798	125262712	ENSG00000254932.2	-	antisense	KNOWN	RP11-687M24.8	1	2	0.229495
chr11	125277552	125277657	125277604	ENSG00000222844.1	+	snRNA	KNOWN	RNU6-321P	1	1	0.404968
chr11	125445745	125496317	125471031	ENSG00000149557.12	-	protein_coding	KNOWN	FEZ1	15	10	-0.000255
chr11	125495214	125499528	125497371	ENSG00000255537.1	+	antisense	KNOWN	AP000708.1	1	2	-0.042938
chr11	125569216	125584687	125576951	ENSG00000149547.14	+	protein_coding	KNOWN	EI24	14	12	0.099460
chr11	125570284	125592568	125581426	ENSG00000254671.2	-	antisense	KNOWN	STT3A-AS1	1	3	0.145203
chr11	125574719	125574818	125574768	ENSG00000222297.1	+	snRNA	KNOWN	RNU6-1156P	1	1	0.109065
chr11	125591712	125625215	125608463	ENSG00000134910.12	+	protein_coding	KNOWN	STT3A	16	19	0.320421
chr11	125625136	125676255	125650695	ENSG00000149554.12	+	protein_coding	KNOWN	CHEK1	18	14	-0.106555
chr11	125649746	125649887	125649816	ENSG00000252255.1	+	snRNA	KNOWN	RNU2-35P	1	1	-0.071507
chr11	125671522	125681123	125676322	ENSG00000134940.13	-	protein_coding	KNOWN	ACRV1	4	5	-0.119927
chr11	125746293	125749867	125748080	ENSG00000171053.9	+	protein_coding	KNOWN	PATE1	3	5	-0.215332
chr11	125776113	125778819	125777466	ENSG00000196844.8	-	protein_coding	KNOWN	PATE2	2	4	-0.413744
chr11	125788111	125791600	125789855	ENSG00000236027.2	+	protein_coding	KNOWN	PATE3	1	3	-0.369534
chr11	125833316	125840069	125836692	ENSG00000237353.6	+	protein_coding	KNOWN	PATE4	3	3	-0.056331
chr11	125873031	125874528	125873779	ENSG00000260209.1	-	lincRNA	KNOWN	RP11-680F20.10	2	2	0.091992
chr11	125883614	125900648	125892131	ENSG00000198331.10	+	protein_coding	KNOWN	HYLS1	3	4	0.005480
chr11	125893485	125903221	125898353	ENSG00000110060.8	-	protein_coding	KNOWN	PUS3	5	4	-0.046392
chr11	125903247	125938916	125921081	ENSG00000255027.2	-	antisense	KNOWN	RP11-680F20.9	2	3	0.049290
chr11	125903376	125928829	125916102	ENSG00000109832.12	+	protein_coding	KNOWN	DDX25	8	12	0.001931
chr11	125939212	125943702	125941457	ENSG00000255124.1	+	lincRNA	KNOWN	RP11-680F20.5	1	5	0.189839
chr11	125940496	125941193	125940844	ENSG00000254790.1	-	lincRNA	KNOWN	RP11-680F20.4	1	1	0.189839
chr11	125950116	125956319	125953217	ENSG00000254967.6	+	antisense	KNOWN	RP11-680F20.6	3	4	0.311002
chr11	125955796	126063335	126009565	ENSG00000064309.14	-	protein_coding	KNOWN	CDON	9	20	-0.229808
chr11	125957900	125958652	125958276	ENSG00000264299.1	+	antisense	KNOWN	RP11-680F20.12	1	1	0.311002
chr11	126067539	126068601	126068070	ENSG00000254759.1	+	processed_pseudogene	KNOWN	NAP1L1P1	1	1	-0.464820
chr11	126100505	126102413	126101459	ENSG00000261257.1	-	lincRNA	KNOWN	RP11-673E11.2	1	1	0.077637
chr11	126160714	126176035	126168374	ENSG00000254833.1	+	lincRNA	KNOWN	RP11-50B3.2	1	2	0.283223
chr11	126179497	126179698	126179597	ENSG00000254771.1	-	processed_pseudogene	KNOWN	RP11-50B3.1	1	1	0.471184
chr11	126202094	126211692	126206893	ENSG00000165526.8	-	protein_coding	KNOWN	RPUSD4	9	7	0.437718
chr11	126208611	126209027	126208819	ENSG00000254694.1	-	antisense	KNOWN	RP11-50B3.4	1	2	0.455428
chr11	126211414	126262986	126237200	ENSG00000197798.8	+	protein_coding	KNOWN	FAM118B	10	9	0.287297
chr11	126214260	126214478	126214369	ENSG00000222067.1	-	snRNA	KNOWN	RNU4-86P	1	1	0.355026
chr11	126245035	126245282	126245158	ENSG00000240098.3	+	misc_RNA	KNOWN	RN7SL351P	1	1	0.158718
chr11	126262919	126269144	126266031	ENSG00000182934.11	-	protein_coding	KNOWN	SRPR	7	14	0.388385
chr11	126269055	126278131	126273593	ENSG00000110074.10	+	protein_coding	KNOWN	FOXRED1	18	11	0.305540
chr11	126278257	126278577	126278417	ENSG00000243607.3	-	processed_pseudogene	KNOWN	RPL35AP26	1	1	0.295923
chr11	126283065	126298845	126290955	ENSG00000150455.13	+	protein_coding	KNOWN	TIRAP	7	6	0.412040
chr11	126292922	126294254	126293588	ENSG00000254905.1	-	antisense	KNOWN	RP11-712L6.7	1	2	0.503060
chr11	126294298	126304318	126299308	ENSG00000255062.1	-	antisense	KNOWN	RP11-712L6.5	2	2	0.503060
chr11	126303752	126345749	126324750	ENSG00000110063.8	+	protein_coding	KNOWN	DCPS	3	6	0.539167
chr11	126340889	126355587	126348238	ENSG00000280832.1	-	antisense	KNOWN	ST3GAL4-AS1	2	3	0.509278
chr11	126355640	126440344	126397992	ENSG00000110080.18	+	protein_coding	KNOWN	ST3GAL4	20	11	0.691185
chr11	126376773	126376893	126376833	ENSG00000278215.1	-	processed_pseudogene	KNOWN	RP11-712L6.8	1	1	0.736897
chr11	126423359	127003460	126713409	ENSG00000149571.10	-	protein_coding	KNOWN	KIRREL3	10	17	0.225523
chr11	126543947	126610948	126577447	ENSG00000257271.1	+	antisense	KNOWN	KIRREL3-AS1	1	2	0.366043
chr11	126652852	126682104	126667478	ENSG00000254607.2	+	antisense	KNOWN	RP11-115C10.1	2	2	0.094828
chr11	126920188	126940659	126930423	ENSG00000254938.1	-	lincRNA	KNOWN	RP11-688I9.4	1	2	0.168260
chr11	126934886	126937150	126936018	ENSG00000279358.1	-	TEC	KNOWN	RP11-688I9.5	1	1	0.231056
chr11	126940746	126945090	126942918	ENSG00000254960.2	+	antisense	KNOWN	KIRREL3-AS2	2	3	0.231056
chr11	126988458	126988542	126988500	ENSG00000266215.1	-	miRNA	KNOWN	MIR3167	1	1	0.107673
chr11	126992452	126995458	126993955	ENSG00000255317.1	+	antisense	KNOWN	RP11-688I9.2	1	2	0.376831
chr11	127002910	127006058	127004484	ENSG00000218109.5	+	antisense	KNOWN	KIRREL3-AS3	2	3	0.376831
chr11	127021754	127053553	127037653	ENSG00000255546.1	+	lincRNA	KNOWN	RP11-168K9.1	1	3	-0.167065
chr11	127067002	127101320	127084161	ENSG00000255087.2	+	lincRNA	KNOWN	RP11-168K9.2	1	3	-0.063715
chr11	127119326	127139735	127129530	ENSG00000272981.1	+	lincRNA	KNOWN	CTD-2234N14.2	1	3	-0.263051
chr11	127190769	127223449	127207109	ENSG00000272642.1	+	lincRNA	KNOWN	CTD-2234N14.1	1	5	-0.302170
chr11	127271062	127337033	127304047	ENSG00000273409.1	+	lincRNA	KNOWN	RP11-480C22.1	1	3	-0.378982
chr11	127406028	127406332	127406180	ENSG00000222774.1	-	misc_RNA	KNOWN	RN7SKP121	1	1	-0.368320
chr11	127407851	127408148	127407999	ENSG00000223315.1	+	misc_RNA	KNOWN	RN7SKP279	1	1	-0.368320
chr11	127657568	127657877	127657722	ENSG00000254591.1	+	processed_pseudogene	KNOWN	RP11-822P1.1	1	1	-0.074827
chr11	127940913	127941654	127941283	ENSG00000254612.2	-	processed_pseudogene	KNOWN	RP11-676M6.1	1	1	0.075504
chr11	128180427	128183554	128181990	ENSG00000273415.1	+	lincRNA	KNOWN	RP11-702B10.2	1	2	-0.071198
chr11	128208829	128241441	128225135	ENSG00000272575.5	+	lincRNA	KNOWN	RP11-702B10.1	2	4	0.033719
chr11	128458761	128587558	128523159	ENSG00000134954.14	-	protein_coding	KNOWN	ETS1	9	10	0.240180
chr11	128522390	128522449	128522419	ENSG00000276176.1	+	miRNA	KNOWN	MIR6090	1	1	0.349928
chr11	128526142	128530389	128528265	ENSG00000254588.1	+	antisense	KNOWN	RP11-1007G5.2	1	4	0.317645
chr11	128614340	128615236	128614788	ENSG00000270160.1	-	lincRNA	KNOWN	RP11-264E20.2	1	1	0.273439
chr11	128615867	128621806	128618836	ENSG00000255465.3	-	lincRNA	KNOWN	RP11-264E20.1	1	3	0.273439
chr11	128629653	128686922	128658287	ENSG00000245008.3	-	antisense	KNOWN	RP11-744N12.3	2	4	0.064844
chr11	128686535	128813267	128749901	ENSG00000151702.16	+	protein_coding	KNOWN	FLI1	9	10	0.271476
chr11	128691672	128696023	128693847	ENSG00000254703.2	-	antisense	KNOWN	SENCR	1	3	0.415462
chr11	128836315	128867373	128851844	ENSG00000151704.15	-	protein_coding	KNOWN	KCNJ1	7	4	0.066758
chr11	128880325	128880668	128880496	ENSG00000255369.1	-	processed_pseudogene	KNOWN	RP11-740D6.3	1	1	0.034148
chr11	128891356	128921035	128906195	ENSG00000120457.11	+	protein_coding	KNOWN	KCNJ5	3	4	0.352086
chr11	128899565	128906035	128902800	ENSG00000174370.9	-	protein_coding	KNOWN	C11orf45	3	4	0.353532
chr11	128934731	128943399	128939065	ENSG00000120471.14	-	protein_coding	KNOWN	TP53AIP1	7	4	0.626769
chr11	128965060	129279324	129122192	ENSG00000134909.18	-	protein_coding	KNOWN	ARHGAP32	8	22	-0.320926
chr11	128993237	128993340	128993288	ENSG00000212597.1	-	snRNA	KNOWN	RNU6-876P	1	1	-0.647481
chr11	129030459	129030572	129030515	ENSG00000206847.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.158704
chr11	129202966	129203070	129203018	ENSG00000199260.1	+	snRNA	KNOWN	RNU6-874P	1	1	-0.323046
chr11	129295286	129296481	129295883	ENSG00000255259.2	-	processed_pseudogene	KNOWN	ZNF123P	1	1	-0.123986
chr11	129375940	129452279	129414109	ENSG00000043039.6	+	protein_coding	KNOWN	BARX2	2	4	-0.128636
chr11	129537869	129538114	129537991	ENSG00000240121.1	+	processed_pseudogene	KNOWN	RPS27P20	1	1	-0.261187
chr11	129591493	129612110	129601801	ENSG00000281386.1	+	lincRNA	KNOWN	RP11-237N19.3	1	2	0.061313
chr11	129612116	129617269	129614692	ENSG00000281097.1	-	lincRNA	KNOWN	LINC01395	1	4	0.213982
chr11	129788064	129788190	129788127	ENSG00000255188.1	-	processed_pseudogene	KNOWN	RP11-507F16.1	1	1	-0.233494
chr11	129815819	129860003	129837911	ENSG00000151715.7	+	protein_coding	KNOWN	TMEM45B	5	6	0.029936
chr11	129863636	129895590	129879613	ENSG00000170322.14	-	protein_coding	KNOWN	NFRKB	11	27	0.352563
chr11	129899706	130002835	129951270	ENSG00000170325.14	-	protein_coding	KNOWN	PRDM10	9	22	0.114131
chr11	130002938	130004356	130003647	ENSG00000233220.3	+	lincRNA	KNOWN	LINC00167	1	1	0.152292
chr11	130008586	130009765	130009175	ENSG00000255057.1	+	processed_pseudogene	KNOWN	RP11-567M21.3	1	1	0.152292
chr11	130032866	130033220	130033043	ENSG00000255262.3	-	processed_pseudogene	KNOWN	TCEB2P2	1	1	0.304400
chr11	130040365	130041071	130040718	ENSG00000255535.2	+	processed_pseudogene	KNOWN	RP11-679I18.4	1	1	0.304400
chr11	130069837	130144811	130107324	ENSG00000084234.16	+	protein_coding	KNOWN	APLP2	25	18	0.228107
chr11	130082495	130082781	130082638	ENSG00000244451.1	-	processed_pseudogene	KNOWN	RPL34P21	1	1	-0.051974
chr11	130114251	130114335	130114293	ENSG00000274197.1	-	snRNA	NOVEL	U4	1	1	0.528944
chr11	130121672	130121780	130121726	ENSG00000277300.1	-	miRNA	NOVEL	AP003041.1	1	1	0.528944
chr11	130159562	130210376	130184969	ENSG00000149418.10	+	protein_coding	KNOWN	ST14	4	19	0.389615
chr11	130226677	130314686	130270681	ENSG00000196323.11	-	protein_coding	KNOWN	ZBTB44	11	11	0.000282
chr11	130285023	130285833	130285428	ENSG00000255358.1	-	processed_pseudogene	KNOWN	RP11-567O18.1	1	2	-0.031240
chr11	130295641	130296946	130296293	ENSG00000255220.1	+	processed_pseudogene	KNOWN	DDX18P5	1	1	0.222839
chr11	130310180	130310476	130310328	ENSG00000272412.2	+	misc_RNA	KNOWN	RN7SL778P	1	1	0.266490
chr11	130314993	130403657	130359325	ENSG00000175773.12	+	lincRNA	KNOWN	RP11-121M22.1	4	6	0.117094
chr11	130404925	130428993	130416959	ENSG00000134917.9	-	protein_coding	KNOWN	ADAMTS8	2	9	0.599190
chr11	130448974	130476641	130462807	ENSG00000166106.3	+	protein_coding	KNOWN	ADAMTS15	1	8	0.414850
chr11	130544643	130544856	130544749	ENSG00000255155.1	-	processed_pseudogene	KNOWN	RP11-535N6.2	1	1	0.524659
chr11	130546799	130547429	130547114	ENSG00000236616.3	-	processed_pseudogene	KNOWN	BAK1P2	1	1	0.524659
chr11	130569460	130569527	130569493	ENSG00000274490.1	+	miRNA	NOVEL	AP004371.1	1	1	0.253273
chr11	130666735	130666803	130666769	ENSG00000274999.1	+	miRNA	KNOWN	MIR8052	1	1	0.153103
chr11	130672956	130717352	130695154	ENSG00000175728.4	+	lincRNA	KNOWN	C11orf44	1	3	0.218332
chr11	130789231	130791025	130790128	ENSG00000255352.1	-	processed_pseudogene	KNOWN	PPP1R10P1	1	1	0.446771
chr11	130844191	130865561	130854876	ENSG00000254842.6	-	lincRNA	KNOWN	RP11-890B15.2	2	7	0.380338
chr11	130866254	130870247	130868250	ENSG00000255455.2	-	lincRNA	KNOWN	RP11-890B15.3	1	1	0.295928
chr11	130875436	130916509	130895972	ENSG00000120451.10	-	protein_coding	KNOWN	SNX19	13	12	0.038745
chr11	131004128	131004429	131004278	ENSG00000242673.3	-	misc_RNA	KNOWN	RN7SL167P	1	1	-0.131730
chr11	131111935	131112015	131111975	ENSG00000221516.1	-	miRNA	NOVEL	AP002806.1	1	1	-0.163953
chr11	131187022	131189753	131188387	ENSG00000236129.1	+	lincRNA	KNOWN	AP002856.4	1	2	-0.334939
chr11	131204999	131215163	131210081	ENSG00000227125.1	+	lincRNA	KNOWN	AP002856.6	1	2	-0.114189
chr11	131234538	131251816	131243177	ENSG00000237612.1	+	lincRNA	KNOWN	AP002856.7	1	2	-0.249296
chr11	131253422	131350917	131302169	ENSG00000231698.2	+	lincRNA	KNOWN	AP002856.5	2	2	-0.121018
chr11	131370478	132336822	131853650	ENSG00000182667.14	+	protein_coding	KNOWN	NTM	22	8	-0.025114
chr11	131385249	131385363	131385306	ENSG00000252351.1	+	snRNA	KNOWN	RNU6ATAC12P	1	1	-0.295565
chr11	131502759	131540867	131521813	ENSG00000237654.5	-	antisense	KNOWN	AP003025.2	3	8	0.074370
chr11	131546662	131573600	131560131	ENSG00000236082.2	-	antisense	KNOWN	RP11-217L21.1	1	2	0.043345
chr11	131662131	131663583	131662857	ENSG00000224795.1	-	lincRNA	KNOWN	NTM-AS1	1	2	0.419033
chr11	131770795	131771638	131771216	ENSG00000271624.1	-	processed_pseudogene	KNOWN	RP11-651K21.1	1	1	0.237669
chr11	131877680	131897108	131887394	ENSG00000238117.1	-	antisense	KNOWN	AP004372.1	1	2	0.033814
chr11	131981096	131984661	131982878	ENSG00000224700.2	-	antisense	KNOWN	RP11-697E14.2	1	2	0.255491
chr11	132284302	132285081	132284691	ENSG00000238262.1	+	sense_intronic	KNOWN	NTM-IT	1	2	-0.091608
chr11	132403360	132404060	132403710	ENSG00000279090.1	-	TEC	KNOWN	RP11-684N3.1	1	1	-0.394886
chr11	132414977	133532519	132973748	ENSG00000183715.13	-	protein_coding	KNOWN	OPCML	8	9	-0.154425
chr11	132771623	132773371	132772497	ENSG00000279497.1	-	TEC	KNOWN	RP11-654C20.1	1	1	-0.179310
chr11	132859245	132860077	132859661	ENSG00000255371.1	-	sense_intronic	KNOWN	OPCML-IT2	1	2	0.134805
chr11	133064697	133068129	133066413	ENSG00000279711.1	+	TEC	KNOWN	AP004782.1	1	1	-0.073293
chr11	133257701	133257804	133257752	ENSG00000280900.1	-	miRNA	NOVEL	AP003972.1	1	1	-0.222519
chr11	133297189	133302634	133299911	ENSG00000279189.1	-	TEC	KNOWN	RP11-861E23.2	1	1	0.108575
chr11	133360029	133366080	133363054	ENSG00000254896.1	-	sense_intronic	KNOWN	OPCML-IT1	1	2	-0.055907
chr11	133502877	133502956	133502916	ENSG00000238504.1	+	miRNA	NOVEL	AP005638.1	1	1	-0.411899
chr11	133783671	133810376	133797023	ENSG00000255258.2	-	lincRNA	KNOWN	RP11-448P19.1	1	3	-0.197213
chr11	133840631	133845538	133843084	ENSG00000166118.7	-	protein_coding	KNOWN	SPATA19	2	7	0.235249
chr11	133864877	133865627	133865252	ENSG00000213153.3	-	processed_pseudogene	KNOWN	RP11-259P6.3	1	1	-0.424925
chr11	133896438	133901601	133899019	ENSG00000280237.1	-	TEC	KNOWN	MIR4697HG	1	1	0.048708
chr11	133898504	133898581	133898542	ENSG00000264919.1	-	miRNA	KNOWN	MIR4697	1	1	0.048708
chr11	133908564	133956985	133932774	ENSG00000080854.14	-	protein_coding	KNOWN	IGSF9B	7	20	0.327064
chr11	134026987	134028118	134027552	ENSG00000255406.1	+	lincRNA	KNOWN	RP11-713P17.5	1	2	0.043357
chr11	134032272	134046849	134039560	ENSG00000204241.7	+	lincRNA	KNOWN	RP11-713P17.3	7	4	0.588754
chr11	134035832	134037107	134036469	ENSG00000254648.1	-	lincRNA	KNOWN	RP11-713P17.4	1	2	0.588754
chr11	134068925	134152001	134110463	ENSG00000166086.12	+	protein_coding	KNOWN	JAM3	8	9	0.055399
chr11	134123828	134124329	134124078	ENSG00000254481.1	-	processed_pseudogene	KNOWN	PTP4A2P2	1	1	-0.260797
chr11	134150119	134225454	134187786	ENSG00000151503.12	-	protein_coding	KNOWN	NCAPD3	14	36	0.148183
chr11	134173095	134173680	134173387	ENSG00000254616.1	+	processed_pseudogene	KNOWN	RP11-700F16.2	1	1	0.256623
chr11	134178824	134186166	134182495	ENSG00000255348.1	+	antisense	KNOWN	RP11-700F16.3	1	2	0.256623
chr11	134224645	134247792	134236218	ENSG00000151502.10	+	protein_coding	KNOWN	VPS26B	7	7	0.389618
chr11	134248279	134253370	134250824	ENSG00000151500.14	-	protein_coding	KNOWN	THYN1	8	8	0.282143
chr11	134253495	134265855	134259675	ENSG00000151498.11	+	protein_coding	KNOWN	ACAD8	17	11	0.167399
chr11	134274245	134319564	134296904	ENSG00000166105.15	+	protein_coding	KNOWN	GLB1L3	8	20	-0.073798
chr11	134316782	134317088	134316935	ENSG00000254442.1	-	processed_pseudogene	KNOWN	AP000859.4	1	1	-0.285765
chr11	134331874	134378341	134355107	ENSG00000149328.14	+	protein_coding	KNOWN	GLB1L2	5	22	-0.047877
chr11	134378504	134411918	134395211	ENSG00000109956.12	-	protein_coding	KNOWN	B3GAT1	5	7	0.084291
chr11	134436473	134505661	134471067	ENSG00000255545.7	+	processed_transcript	KNOWN	RP11-627G23.1	4	6	0.078905
chr11	134563396	134573056	134568226	ENSG00000254573.1	+	lincRNA	KNOWN	AP004550.1	1	3	-0.012250
chr11	134671426	134672024	134671725	ENSG00000254989.1	-	lincRNA	KNOWN	RP11-469N6.3	1	2	0.179455
chr11	134714542	134715922	134715232	ENSG00000255344.1	+	lincRNA	KNOWN	RP11-469N6.2	1	2	-0.233408
chr11	134735596	134763810	134749703	ENSG00000251226.1	+	lincRNA	KNOWN	RP11-469N6.1	1	2	0.074119
chr11	134950708	134951568	134951138	ENSG00000255327.1	+	lincRNA	KNOWN	RP11-555G19.1	1	2	0.158761
chr11	134985683	134986799	134986241	ENSG00000279046.1	+	TEC	KNOWN	RP11-555G19.2	1	1	-0.016649
chr11	135061781	135075899	135068840	ENSG00000255512.1	-	lincRNA	KNOWN	AP005135.2	1	3	-0.035817
chr11_KI270721v1_random	2585	11802	7193	ENSG00000276345.1	+	protein_coding	NOVEL	AC004556.1	1	5	NA
chr11_KI270721v1_random	51722	51792	51757	ENSG00000273532.1	+	misc_RNA	NOVEL	H19_1	1	1	NA
chr11_KI270721v1_random	51912	52024	51968	ENSG00000278246.1	-	miRNA	NOVEL	AC004556.2	1	1	NA
chr11_KI270721v1_random	52666	52734	52700	ENSG00000276351.1	+	misc_RNA	NOVEL	H19_2	1	1	NA
chr11_KI270721v1_random	52895	53010	52952	ENSG00000275661.1	+	misc_RNA	NOVEL	H19_3	1	1	NA
chr12	12310	13501	12905	ENSG00000256263.1	+	unprocessed_pseudogene	KNOWN	DDX11L8	1	4	0.844305
chr12	14522	32015	23268	ENSG00000226210.3	-	unprocessed_pseudogene	KNOWN	WASH7P	1	11	0.804194
chr12	17484	17551	17517	ENSG00000273823.1	-	miRNA	NOVEL	AC215219.2	1	1	0.844305
chr12	32418	32555	32486	ENSG00000238823.1	+	miRNA	NOVEL	AC215219.1	1	1	0.496263
chr12	36602	38133	37367	ENSG00000249054.2	-	lincRNA	KNOWN	FAM138D	2	3	0.496263
chr12	66765	178460	122612	ENSG00000120645.11	+	protein_coding	KNOWN	IQSEC3	5	14	0.442468
chr12	106524	111850	109187	ENSG00000256948.1	-	antisense	KNOWN	RP11-598F7.3	1	2	0.390843
chr12	137411	149169	143290	ENSG00000249695.6	-	antisense	KNOWN	RP11-598F7.4	2	10	0.574054
chr12	164664	166321	165492	ENSG00000256694.1	-	antisense	KNOWN	RP11-598F7.5	1	2	0.400677
chr12	166856	182399	174627	ENSG00000256540.1	-	lincRNA	KNOWN	RP11-598F7.6	2	3	0.497208
chr12	190077	214570	202323	ENSG00000111181.12	-	protein_coding	KNOWN	SLC6A12	16	17	0.310500
chr12	193036	194130	193583	ENSG00000255671.1	+	antisense	KNOWN	RP11-283I3.1	1	2	0.255222
chr12	203642	205094	204368	ENSG00000256577.2	+	antisense	KNOWN	RP11-283I3.2	1	3	0.255222
chr12	220621	262873	241747	ENSG00000010379.15	-	protein_coding	KNOWN	SLC6A13	12	15	0.313897
chr12	253442	257299	255370	ENSG00000255746.1	-	sense_intronic	KNOWN	RP11-283I3.4	1	3	0.190556
chr12	273954	277123	275538	ENSG00000261799.1	-	sense_overlapping	KNOWN	RP11-283I3.6	1	1	0.252456
chr12	280129	389454	334791	ENSG00000073614.11	-	protein_coding	KNOWN	KDM5A	12	30	0.261692
chr12	389273	442645	415959	ENSG00000120647.9	+	protein_coding	KNOWN	CCDC77	12	13	0.205282
chr12	460364	563509	511936	ENSG00000139044.10	+	protein_coding	KNOWN	B4GALNT3	6	20	0.352911
chr12	564296	663779	614037	ENSG00000171840.11	-	protein_coding	KNOWN	NINJ2	5	4	0.566229
chr12	585865	586486	586175	ENSG00000256020.1	-	sense_intronic	KNOWN	RP5-1154L15.2	1	2	0.698897
chr12	589530	589589	589559	ENSG00000238370.1	-	snRNA	KNOWN	RNU7-103P	1	1	0.698897
chr12	590633	591269	590951	ENSG00000255825.1	+	antisense	KNOWN	RP5-1154L15.1	1	2	0.486107
chr12	630891	663706	647298	ENSG00000177406.4	+	antisense	KNOWN	RP11-218M22.1	3	5	0.463817
chr12	674801	684127	679464	ENSG00000256672.1	-	lincRNA	KNOWN	RP11-218M22.2	1	3	0.474712
chr12	752593	911452	832022	ENSG00000060237.16	+	protein_coding	KNOWN	WNK1	21	31	0.183811
chr12	781133	781258	781195	ENSG00000221439.1	+	snRNA	KNOWN	RNU4ATAC16P	1	1	0.331063
chr12	912077	990053	951065	ENSG00000002016.16	-	protein_coding	KNOWN	RAD52	20	14	0.367182
chr12	974133	991190	982661	ENSG00000250132.6	-	antisense	KNOWN	RP11-359B12.2	4	3	0.336079
chr12	990509	1495933	1243221	ENSG00000082805.19	+	protein_coding	KNOWN	ERC1	25	21	0.131930
chr12	1151810	1153059	1152434	ENSG00000275811.1	-	processed_pseudogene	KNOWN	HTR1DP1	1	2	0.118303
chr12	1380060	1391502	1385781	ENSG00000249028.2	-	antisense	KNOWN	RP5-951N9.1	1	2	0.102659
chr12	1385833	1386987	1386410	ENSG00000267285.1	+	sense_intronic	KNOWN	RP5-951N9.2	1	2	0.108111
chr12	1500525	1507318	1503921	ENSG00000249628.2	-	lincRNA	KNOWN	LINC00942	1	3	0.399501
chr12	1529891	1647243	1588567	ENSG00000111186.12	+	protein_coding	KNOWN	WNT5B	10	5	0.550783
chr12	1565993	1594165	1580079	ENSG00000171823.6	-	protein_coding	KNOWN	FBXL14	2	2	0.530681
chr12	1660315	1660380	1660347	ENSG00000266043.1	-	miRNA	KNOWN	MIR3649	1	1	0.428717
chr12	1688574	1788678	1738626	ENSG00000006831.9	+	protein_coding	KNOWN	ADIPOR2	7	8	0.068067
chr12	1695830	1698044	1696937	ENSG00000271500.1	-	processed_pseudogene	KNOWN	RP11-288K12.1	1	2	0.060628
chr12	1757231	1758011	1757621	ENSG00000243663.1	-	processed_pseudogene	KNOWN	RPS4XP14	1	1	0.101390
chr12	1791957	1918836	1855396	ENSG00000151062.14	-	protein_coding	KNOWN	CACNA2D4	26	38	0.456754
chr12	1820267	1836752	1828509	ENSG00000166159.10	+	protein_coding	KNOWN	LRTM2	12	5	0.530903
chr12	1917951	1922867	1920409	ENSG00000256706.1	+	antisense	KNOWN	RP5-1096D14.3	1	2	0.447867
chr12	1929202	1936574	1932888	ENSG00000235049.1	-	lincRNA	KNOWN	LINC00940	1	2	0.380291
chr12	1946054	2004535	1975294	ENSG00000151065.13	-	protein_coding	KNOWN	DCP1B	7	10	0.071627
chr12	1970786	2697950	2334368	ENSG00000151067.20	+	protein_coding	KNOWN	CACNA1C	36	49	0.377686
chr12	2004666	2011392	2008029	ENSG00000203593.3	+	antisense	KNOWN	RP5-1096D14.6	1	2	-0.052768
chr12	2018213	2020532	2019372	ENSG00000256837.1	+	sense_intronic	KNOWN	CACNA1C-IT1	1	2	-0.049254
chr12	2048352	2049463	2048907	ENSG00000256257.1	+	sense_intronic	KNOWN	CACNA1C-IT2	1	2	0.268870
chr12	2217462	2217920	2217691	ENSG00000278255.1	-	antisense	KNOWN	RP1-53O8.2	1	1	0.555299
chr12	2220537	2223479	2222008	ENSG00000256025.1	-	antisense	KNOWN	CACNA1C-AS4	1	4	0.555299
chr12	2269776	2288937	2279356	ENSG00000256721.1	+	sense_intronic	KNOWN	CACNA1C-IT3	1	3	0.661724
chr12	2603350	2607440	2605395	ENSG00000256769.1	-	antisense	KNOWN	CACNA1C-AS3	1	2	0.562883
chr12	2659937	2660969	2660453	ENSG00000203648.3	+	processed_pseudogene	KNOWN	AC007618.3	1	2	0.458935
chr12	2668500	2672220	2670360	ENSG00000256271.1	-	antisense	KNOWN	CACNA1C-AS2	1	2	0.429230
chr12	2676001	2691200	2683600	ENSG00000246627.6	-	antisense	KNOWN	CACNA1C-AS1	3	4	0.424250
chr12	2740093	2742855	2741474	ENSG00000274659.1	+	lincRNA	KNOWN	RP11-986G18.2	1	3	0.369526
chr12	2742626	2771908	2757267	ENSG00000256150.1	-	lincRNA	KNOWN	RP11-885B4.1	1	2	0.328083
chr12	2752597	2753132	2752864	ENSG00000256902.1	-	processed_pseudogene	KNOWN	IQSEC3P1	1	1	0.311305
chr12	2761200	2770455	2765827	ENSG00000255669.1	-	lincRNA	KNOWN	RP11-885B4.2	1	4	0.312906
chr12	2781904	2782371	2782137	ENSG00000224438.3	+	processed_pseudogene	KNOWN	RPL23AP14	1	1	0.343799
chr12	2786931	2794295	2790613	ENSG00000256030.1	-	transcribed_processed_pseudogene	KNOWN	CBX3P4	2	2	0.484911
chr12	2794953	2805423	2800188	ENSG00000004478.7	+	protein_coding	KNOWN	FKBP4	8	10	0.585686
chr12	2796877	2812902	2804889	ENSG00000258325.2	-	antisense	KNOWN	RP4-816N1.6	3	2	0.588257
chr12	2797136	2803938	2800537	ENSG00000258092.1	-	antisense	KNOWN	RP4-816N1.7	1	2	0.585686
chr12	2812622	2859791	2836206	ENSG00000111203.11	+	protein_coding	KNOWN	ITFG2	14	13	0.640785
chr12	2825348	2835544	2830446	ENSG00000053702.14	-	protein_coding	KNOWN	NRIP2	3	6	0.604766
chr12	2857681	2877155	2867418	ENSG00000111206.12	-	protein_coding	KNOWN	FOXM1	10	10	0.667140
chr12	2876258	2889523	2882890	ENSG00000171792.10	+	protein_coding	KNOWN	RHNO1	10	4	0.475320
chr12	2877223	2941140	2909181	ENSG00000078246.15	+	protein_coding	KNOWN	TULP3	9	15	0.508632
chr12	2885819	2886329	2886074	ENSG00000278356.1	+	sense_intronic	KNOWN	RP11-372B4.3	1	2	0.475320
chr12	2954240	2954338	2954289	ENSG00000252996.1	-	snRNA	KNOWN	RNU6-1315P	1	1	0.599679
chr12	2959330	3040673	3000001	ENSG00000197905.8	+	protein_coding	KNOWN	TEAD4	8	13	0.674839
chr12	3041437	3044950	3043193	ENSG00000250899.3	+	lincRNA	KNOWN	RP11-253E3.3	1	1	0.614514
chr12	3071532	3072145	3071838	ENSG00000234589.4	-	processed_pseudogene	KNOWN	RP11-253E3.1	1	1	0.847258
chr12	3077355	3286564	3181959	ENSG00000011105.11	+	protein_coding	KNOWN	TSPAN9	7	9	0.587177
chr12	3124777	3125063	3124920	ENSG00000278469.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.604877
chr12	3149797	3151476	3150636	ENSG00000256197.1	+	sense_intronic	KNOWN	TSPAN9-IT1	1	2	0.358103
chr12	3171657	3174056	3172856	ENSG00000275850.1	+	sense_intronic	KNOWN	RP11-543P15.3	1	1	0.636312
chr12	3211663	3211917	3211790	ENSG00000227081.5	-	processed_pseudogene	KNOWN	RP11-543P15.1	1	1	0.602187
chr12	3296202	3300224	3298213	ENSG00000250770.2	-	lincRNA	KNOWN	RP5-1063M23.1	1	2	0.743356
chr12	3318718	3325343	3322030	ENSG00000236908.2	+	lincRNA	KNOWN	RP5-1063M23.2	2	3	0.510944
chr12	3367833	3371346	3369589	ENSG00000257048.1	+	lincRNA	KNOWN	RP11-476M19.2	1	3	0.146801
chr12	3381349	3593973	3487661	ENSG00000111218.11	+	protein_coding	KNOWN	PRMT8	4	12	0.016559
chr12	3462718	3463586	3463152	ENSG00000256691.1	-	antisense	KNOWN	RP11-476M19.3	1	2	0.164504
chr12	3468950	3469296	3469123	ENSG00000243507.1	+	processed_pseudogene	KNOWN	RP11-476M19.1	1	1	0.164504
chr12	3606633	3764819	3685726	ENSG00000130038.9	-	protein_coding	KNOWN	CRACR2A	6	20	0.093678
chr12	3610307	3612003	3611155	ENSG00000280202.1	-	TEC	KNOWN	RP5-1180D12.1	1	1	0.099605
chr12	3726222	3726327	3726274	ENSG00000222338.1	-	snRNA	KNOWN	RNU6-174P	1	1	-0.280379
chr12	3791047	3873448	3832247	ENSG00000111224.13	-	protein_coding	KNOWN	PARP11	8	10	-0.235312
chr12	3839459	3842525	3840992	ENSG00000118976.5	+	processed_pseudogene	KNOWN	OTUD4P1	1	1	-0.296862
chr12	3871734	3910338	3891036	ENSG00000256862.1	+	antisense	KNOWN	RP11-664D1.1	3	2	-0.121761
chr12	4020977	4026658	4023817	ENSG00000256969.1	+	lincRNA	KNOWN	RP11-320N7.2	2	2	0.017224
chr12	4097451	4099519	4098485	ENSG00000256356.1	+	processed_pseudogene	KNOWN	HSPA8P5	1	1	-0.261240
chr12	4109661	4118132	4113896	ENSG00000242444.3	-	transcribed_processed_pseudogene	KNOWN	RP11-320N7.1	2	2	0.103951
chr12	4248765	4276184	4262474	ENSG00000256164.1	-	antisense	KNOWN	CCND2-AS1	1	2	0.152088
chr12	4252735	4275065	4263900	ENSG00000255920.1	-	antisense	KNOWN	CCND2-AS2	1	2	0.157074
chr12	4273772	4305350	4289561	ENSG00000118971.7	+	protein_coding	KNOWN	CCND2	4	5	0.342790
chr12	4307763	4354593	4331178	ENSG00000078237.6	+	protein_coding	KNOWN	TIGAR	4	6	0.085022
chr12	4324372	4324811	4324591	ENSG00000213970.3	-	processed_pseudogene	KNOWN	RP11-264F23.1	1	1	0.047598
chr12	4368227	4379728	4373977	ENSG00000118972.1	-	protein_coding	KNOWN	FGF23	1	3	-0.126194
chr12	4428155	4445614	4436884	ENSG00000111241.2	-	protein_coding	KNOWN	FGF6	3	3	0.184760
chr12	4487728	4538508	4513118	ENSG00000047621.11	-	protein_coding	KNOWN	C12orf4	9	14	-0.056379
chr12	4538798	4560048	4549423	ENSG00000111247.14	+	protein_coding	KNOWN	RAD51AP1	14	11	0.006157
chr12	4562204	4615302	4588753	ENSG00000010219.13	+	protein_coding	KNOWN	DYRK4	17	15	0.071583
chr12	4601991	4603420	4602705	ENSG00000256748.1	-	processed_pseudogene	KNOWN	RP11-234B24.5	1	1	-0.068899
chr12	4604944	4662643	4633793	ENSG00000272921.1	+	protein_coding	KNOWN	RP11-500M8.7	1	7	-0.048987
chr12	4615508	4649047	4632277	ENSG00000111254.7	-	protein_coding	KNOWN	AKAP3	6	6	-0.112120
chr12	4635349	4636140	4635744	ENSG00000256799.1	-	processed_pseudogene	KNOWN	RP11-500M8.6	1	2	-0.138128
chr12	4645496	4648027	4646761	ENSG00000256381.1	+	sense_intronic	KNOWN	RP11-500M8.4	1	2	-0.138128
chr12	4649095	4694317	4671706	ENSG00000139180.10	+	protein_coding	KNOWN	NDUFA9	9	11	0.032768
chr12	4657634	4744581	4701107	ENSG00000255639.2	+	protein_coding	KNOWN	RP11-234B24.6	2	6	-0.087183
chr12	4700417	4720102	4710259	ENSG00000255474.1	-	lincRNA	KNOWN	RP11-234B24.2	1	4	-0.143411
chr12	4720341	4851927	4786134	ENSG00000130035.6	+	protein_coding	KNOWN	GALNT8	5	11	0.076320
chr12	4806542	4808641	4807591	ENSG00000256988.1	-	lincRNA	KNOWN	RP11-234B24.4	1	2	0.060797
chr12	4809176	4813412	4811294	ENSG00000151079.7	+	protein_coding	KNOWN	KCNA6	1	1	0.256055
chr12	4838955	4842675	4840815	ENSG00000255608.1	+	sense_intronic	KNOWN	RP3-377H17.2	1	2	0.138786
chr12	4909905	4931361	4920633	ENSG00000111262.4	+	protein_coding	KNOWN	KCNA1	3	3	0.239480
chr12	5018465	5021713	5020089	ENSG00000256790.1	+	lincRNA	KNOWN	RP11-429A20.3	1	2	0.154728
chr12	5023682	5025594	5024638	ENSG00000256654.2	+	lincRNA	KNOWN	RP11-429A20.4	1	2	0.154728
chr12	5032388	5032941	5032664	ENSG00000255996.1	-	processed_pseudogene	KNOWN	RP11-429A20.2	1	1	0.277684
chr12	5043989	5046788	5045388	ENSG00000130037.4	+	protein_coding	KNOWN	KCNA5	1	1	0.277684
chr12	5233997	5243151	5238574	ENSG00000256115.5	-	lincRNA	KNOWN	RP11-319E16.1	4	4	0.335397
chr12	5290480	5383653	5337066	ENSG00000256417.1	+	lincRNA	KNOWN	RP11-1038A11.3	2	5	-0.113989
chr12	5315961	5319347	5317654	ENSG00000256146.1	+	lincRNA	KNOWN	RP11-319E16.2	1	1	-0.212014
chr12	5366048	5367774	5366911	ENSG00000256218.1	-	lincRNA	KNOWN	RP11-1038A11.2	1	1	-0.161457
chr12	5388589	5406651	5397620	ENSG00000255983.1	+	lincRNA	KNOWN	RP11-1038A11.1	1	5	0.005046
chr12	5432112	5521536	5476824	ENSG00000185652.11	+	protein_coding	KNOWN	NTF3	6	5	0.407646
chr12	5531869	5946232	5739050	ENSG00000047617.14	-	protein_coding	KNOWN	ANO2	12	27	0.191163
chr12	5583797	5584085	5583941	ENSG00000255973.1	+	processed_pseudogene	KNOWN	RP11-592H6.3	1	1	0.342129
chr12	5948874	6124770	6036822	ENSG00000110799.13	-	protein_coding	KNOWN	VWF	9	52	0.395454
chr12	6095699	6095970	6095834	ENSG00000240533.3	-	misc_RNA	KNOWN	RN7SL69P	1	1	0.543929
chr12	6155035	6160719	6157877	ENSG00000255775.1	-	lincRNA	KNOWN	RP3-454B23.1	1	3	0.559644
chr12	6199715	6238271	6218993	ENSG00000010278.11	+	protein_coding	KNOWN	CD9	13	9	0.790536
chr12	6234345	6234455	6234400	ENSG00000202318.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.707328
chr12	6270168	6270425	6270296	ENSG00000256103.2	-	processed_pseudogene	KNOWN	RP1-96H9.5	1	1	0.929262
chr12	6310436	6328506	6319471	ENSG00000008323.15	+	protein_coding	KNOWN	PLEKHG6	9	16	0.749886
chr12	6328757	6342114	6335435	ENSG00000067182.7	-	protein_coding	KNOWN	TNFRSF1A	16	10	1.125912
chr12	6344554	6344837	6344695	ENSG00000265388.2	+	misc_RNA	KNOWN	RN7SL391P	1	1	1.164461
chr12	6346843	6377730	6362286	ENSG00000111319.12	-	protein_coding	KNOWN	SCNN1A	23	13	0.933497
chr12	6375045	6391571	6383308	ENSG00000111321.10	+	protein_coding	KNOWN	LTBR	15	10	0.952220
chr12	6393905	6396148	6395026	ENSG00000256433.2	+	lincRNA	KNOWN	RP1-102E24.8	1	3	1.132256
chr12	6409637	6410013	6409825	ENSG00000213942.3	-	processed_pseudogene	KNOWN	RP1-102E24.1	1	1	1.106994
chr12	6438498	6438852	6438675	ENSG00000224906.3	+	processed_pseudogene	KNOWN	RP1-102E24.9	1	1	0.807424
chr12	6439001	6451567	6445284	ENSG00000215039.6	-	processed_transcript	KNOWN	CD27-AS1	9	7	0.834465
chr12	6444867	6451718	6448292	ENSG00000139193.3	+	protein_coding	KNOWN	CD27	2	6	0.861799
chr12	6451690	6466517	6459103	ENSG00000139192.11	+	protein_coding	KNOWN	TAPBPL	8	9	1.024135
chr12	6462237	6470987	6466612	ENSG00000139190.16	-	protein_coding	KNOWN	VAMP1	8	5	0.989566
chr12	6466537	6467135	6466836	ENSG00000276718.1	+	antisense	KNOWN	RP1-102E24.10	1	1	1.024135
chr12	6477714	6480207	6478960	ENSG00000256913.1	+	processed_pseudogene	KNOWN	RP1-102E24.6	1	1	0.717982
chr12	6491886	6493841	6492863	ENSG00000111639.7	-	protein_coding	KNOWN	MRPL51	7	3	0.783443
chr12	6493356	6531955	6512655	ENSG00000010292.12	+	protein_coding	KNOWN	NCAPD2	13	32	0.857912
chr12	6510222	6510551	6510386	ENSG00000239002.3	+	snoRNA	KNOWN	SCARNA10	1	1	0.888708
chr12	6510275	6510522	6510398	ENSG00000276232.1	+	sense_intronic	KNOWN	SCARNA10	1	1	0.888708
chr12	6532290	6533498	6532894	ENSG00000255966.1	-	antisense	KNOWN	RP5-940J5.3	1	2	1.176654
chr12	6533927	6538374	6536150	ENSG00000111640.14	+	protein_coding	KNOWN	GAPDH	11	9	1.176654
chr12	6537794	6538370	6538082	ENSG00000269968.1	-	antisense	KNOWN	RP5-940J5.9	1	2	1.176654
chr12	6538375	6556083	6547229	ENSG00000010295.19	-	protein_coding	KNOWN	IFFO1	12	12	1.219611
chr12	6543504	6544931	6544217	ENSG00000245667.2	+	antisense	KNOWN	RP5-940J5.8	1	2	1.176654
chr12	6556863	6568691	6562777	ENSG00000111641.10	-	protein_coding	KNOWN	NOP2	24	17	1.301684
chr12	6570083	6607476	6588779	ENSG00000111642.14	-	protein_coding	KNOWN	CHD4	14	40	0.921072
chr12	6578622	6584739	6581680	ENSG00000247853.2	+	antisense	KNOWN	RP5-940J5.6	1	2	1.117832
chr12	6581474	6581609	6581541	ENSG00000251898.1	-	scaRNA	KNOWN	SCARNA11	1	1	1.117832
chr12	6618835	6636447	6627641	ENSG00000184574.9	-	protein_coding	KNOWN	LPAR5	3	3	1.097460
chr12	6638075	6647460	6642767	ENSG00000111644.7	-	protein_coding	KNOWN	ACRBP	9	10	1.024034
chr12	6650280	6663148	6656714	ENSG00000111653.19	-	protein_coding	KNOWN	ING4	18	9	0.872211
chr12	6663260	6672069	6667664	ENSG00000219410.5	+	antisense	KNOWN	RP4-761J14.8	3	2	0.871755
chr12	6666477	6689572	6678024	ENSG00000126746.17	-	protein_coding	KNOWN	ZNF384	16	11	0.870567
chr12	6693792	6700800	6697296	ENSG00000139200.13	-	protein_coding	KNOWN	PIANP	6	6	1.091992
chr12	6709452	6709552	6709502	ENSG00000252186.1	+	snRNA	KNOWN	RNU6-781P	1	1	1.091992
chr12	6722041	6722287	6722164	ENSG00000280974.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.965580
chr12	6723233	6723687	6723460	ENSG00000270068.1	+	antisense	KNOWN	RP4-761J14.9	1	1	0.965580
chr12	6723741	6731875	6727808	ENSG00000111652.9	+	protein_coding	KNOWN	COPS7A	22	8	0.956300
chr12	6742985	6743641	6743313	ENSG00000269892.1	+	lincRNA	KNOWN	RP4-761J14.10	1	1	0.925342
chr12	6747996	6767475	6757735	ENSG00000089693.10	-	protein_coding	KNOWN	MLF2	11	9	1.096732
chr12	6765516	6770952	6768234	ENSG00000159335.15	+	protein_coding	KNOWN	PTMS	7	5	1.164237
chr12	6772512	6778455	6775483	ENSG00000089692.8	+	protein_coding	KNOWN	LAG3	4	8	1.389378
chr12	6783854	6784161	6784007	ENSG00000244532.1	-	misc_RNA	KNOWN	RN7SL380P	1	1	1.389378
chr12	6786858	6820808	6803833	ENSG00000010610.9	+	protein_coding	KNOWN	CD4	12	10	0.996898
chr12	6821545	6829972	6825758	ENSG00000250510.7	+	protein_coding	KNOWN	GPR162	7	5	0.863964
chr12	6828410	6839851	6834130	ENSG00000110811.19	+	protein_coding	KNOWN	P3H3	11	16	1.351700
chr12	6839954	6847393	6843673	ENSG00000111664.10	+	protein_coding	KNOWN	GNB3	9	11	1.430366
chr12	6844793	6852066	6848429	ENSG00000111665.11	-	protein_coding	KNOWN	CDCA3	12	6	1.387687
chr12	6852128	6866632	6859380	ENSG00000111667.13	+	protein_coding	KNOWN	USP5	7	20	1.280196
chr12	6867119	6870948	6869033	ENSG00000111669.14	+	protein_coding	KNOWN	TPI1	10	7	1.296443
chr12	6870935	6889358	6880146	ENSG00000111671.9	-	protein_coding	KNOWN	SPSB2	5	4	1.345748
chr12	6873389	6884741	6879065	ENSG00000240370.6	+	transcribed_processed_pseudogene	KNOWN	U47924.6	5	4	1.345748
chr12	6873569	6914243	6893906	ENSG00000010626.14	+	protein_coding	KNOWN	LRRC23	15	8	1.181128
chr12	6884682	6885786	6885234	ENSG00000248593.3	+	transcribed_unprocessed_pseudogene	KNOWN	DSTNP2	2	2	1.345748
chr12	6899752	6900212	6899982	ENSG00000275703.1	+	lincRNA	KNOWN	U47924.32	1	1	1.048923
chr12	6913745	6923698	6918721	ENSG00000111674.8	+	protein_coding	KNOWN	ENO2	14	12	1.166846
chr12	6924463	6942321	6933392	ENSG00000111676.14	+	protein_coding	KNOWN	ATN1	4	10	1.123742
chr12	6942978	6946003	6944490	ENSG00000111678.10	+	protein_coding	KNOWN	C12orf57	7	4	1.104376
chr12	6943508	6944604	6944056	ENSG00000272173.1	-	antisense	KNOWN	U47924.31	1	1	1.104376
chr12	6943816	6943878	6943847	ENSG00000238923.1	+	snRNA	KNOWN	RNU7-1	1	1	1.104376
chr12	6946468	6961316	6953892	ENSG00000111679.16	+	protein_coding	KNOWN	PTPN6	23	16	1.323476
chr12	6963246	6964447	6963846	ENSG00000257084.1	+	lincRNA	KNOWN	U47924.27	1	2	1.391837
chr12	6963672	6963780	6963726	ENSG00000207713.2	+	miRNA	KNOWN	MIR200C	1	1	1.391837
chr12	6964097	6964191	6964144	ENSG00000207708.1	+	miRNA	KNOWN	MIR141	1	1	1.391837
chr12	6964949	6965382	6965165	ENSG00000271969.1	+	antisense	KNOWN	U47924.29	1	1	1.391837
chr12	6965327	6970825	6968076	ENSG00000215021.8	-	protein_coding	KNOWN	PHB2	14	10	1.351553
chr12	6967337	6967606	6967471	ENSG00000238795.1	-	snoRNA	KNOWN	SCARNA12	1	1	1.391837
chr12	6970893	6979941	6975417	ENSG00000126749.14	+	protein_coding	KNOWN	EMG1	4	6	1.123701
chr12	6970921	6997428	6984174	ENSG00000268439.5	+	protein_coding	KNOWN	RP3-461F17.3	2	8	0.997666
chr12	6976186	7018510	6997348	ENSG00000111684.10	-	protein_coding	KNOWN	LPCAT3	13	13	0.784541
chr12	6988259	7071032	7029645	ENSG00000182326.14	+	protein_coding	KNOWN	C1S	21	16	0.650478
chr12	7032108	7032398	7032253	ENSG00000239701.1	+	processed_pseudogene	KNOWN	RP3-461F17.1	1	1	0.771137
chr12	7041156	7041641	7041398	ENSG00000257078.1	-	processed_pseudogene	KNOWN	RP3-461F17.2	1	1	0.771137
chr12	7080209	7092607	7086408	ENSG00000159403.15	-	protein_coding	KNOWN	C1R	14	11	0.939939
chr12	7089587	7109273	7099430	ENSG00000139178.10	-	protein_coding	KNOWN	C1RL	12	7	1.092485
chr12	7108052	7122501	7115276	ENSG00000205885.7	+	antisense	KNOWN	C1RL-AS1	5	12	1.035954
chr12	7115736	7116486	7116111	ENSG00000276144.1	-	lincRNA	KNOWN	ABC12-49244600F4.4	1	1	1.026503
chr12	7118785	7118891	7118838	ENSG00000200345.2	+	snRNA	KNOWN	RNU6-485P	1	1	1.026503
chr12	7123684	7128942	7126313	ENSG00000139194.7	-	protein_coding	KNOWN	RBP5	4	4	1.026503
chr12	7129079	7131198	7130138	ENSG00000256967.1	-	antisense	KNOWN	RP11-273B20.1	2	3	1.033016
chr12	7129698	7158945	7144321	ENSG00000139182.13	+	protein_coding	KNOWN	CLSTN3	16	18	0.962778
chr12	7166674	7189069	7177871	ENSG00000255572.1	-	antisense	KNOWN	RP11-273B20.3	2	3	0.467633
chr12	7188685	7218574	7203629	ENSG00000139197.10	+	protein_coding	KNOWN	PEX5	20	18	0.519887
chr12	7237432	7240986	7239209	ENSG00000256480.1	+	processed_pseudogene	KNOWN	RP11-185H22.1	1	2	0.044374
chr12	7304284	7328724	7316504	ENSG00000215009.5	+	protein_coding	KNOWN	ACSM4	2	13	-0.308150
chr12	7346685	7479897	7413291	ENSG00000177675.8	-	protein_coding	KNOWN	CD163L1	10	20	-0.272341
chr12	7438780	7439990	7439385	ENSG00000255836.1	-	processed_pseudogene	KNOWN	RP11-157G21.2	1	1	-0.295031
chr12	7470813	7503893	7487353	ENSG00000177575.12	-	protein_coding	KNOWN	CD163	11	17	-0.138010
chr12	7566369	7567382	7566875	ENSG00000235868.3	+	processed_pseudogene	KNOWN	GAPDHP31	1	1	0.018825
chr12	7604350	7605214	7604782	ENSG00000256331.1	-	processed_pseudogene	KNOWN	NIFKP3	1	1	-0.013618
chr12	7606834	7607331	7607082	ENSG00000255977.1	+	processed_pseudogene	KNOWN	RP11-444J21.2	1	1	-0.013618
chr12	7649400	7665903	7657651	ENSG00000111701.6	-	protein_coding	KNOWN	APOBEC1	2	5	0.541763
chr12	7689782	7695776	7692779	ENSG00000184344.3	-	protein_coding	KNOWN	GDF3	1	2	0.233765
chr12	7711454	7717559	7714506	ENSG00000187569.2	+	protein_coding	KNOWN	DPPA3	1	4	0.145763
chr12	7729415	7751605	7740510	ENSG00000198178.10	-	protein_coding	KNOWN	CLEC4C	6	7	0.070908
chr12	7765216	7774121	7769668	ENSG00000205857.1	+	protein_coding	KNOWN	NANOGNB	1	4	0.365474
chr12	7784403	7784511	7784457	ENSG00000201549.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.289931
chr12	7787794	7799141	7793467	ENSG00000111704.10	+	protein_coding	KNOWN	NANOG	4	6	0.236196
chr12	7800361	7800467	7800414	ENSG00000199912.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.223236
chr12	7812512	7891148	7851830	ENSG00000173262.11	-	protein_coding	KNOWN	SLC2A14	21	16	0.323120
chr12	7850717	7850818	7850767	ENSG00000201663.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.255491
chr12	7856169	7856471	7856320	ENSG00000278459.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.255491
chr12	7860437	7860764	7860600	ENSG00000241828.2	+	processed_pseudogene	KNOWN	RP11-277J24.1	1	1	0.255491
chr12	7870852	7871370	7871111	ENSG00000255885.1	+	processed_pseudogene	KNOWN	RP11-815D16.1	1	1	0.532564
chr12	7890801	7900140	7895470	ENSG00000176654.12	+	transcribed_unprocessed_pseudogene	KNOWN	NANOGP1	2	6	0.437767
chr12	7896608	7896956	7896782	ENSG00000255356.2	-	processed_pseudogene	KNOWN	RP11-277E18.2	1	1	0.437767
chr12	7919230	7936275	7927752	ENSG00000059804.15	-	protein_coding	KNOWN	SLC2A3	11	10	0.488139
chr12	7976259	7976360	7976309	ENSG00000206636.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.526012
chr12	7994770	7995084	7994927	ENSG00000240739.1	-	unprocessed_pseudogene	KNOWN	RP11-69M1.1	1	1	0.778176
chr12	8014093	8019007	8016550	ENSG00000282080.1	-	lincRNA	KNOWN	RP11-69M1.8	1	2	0.565555
chr12	8015024	8016406	8015715	ENSG00000255964.1	+	processed_pseudogene	KNOWN	RP11-69M1.3	1	2	0.565555
chr12	8017201	8017860	8017530	ENSG00000255581.1	-	processed_pseudogene	KNOWN	RP11-69M1.4	1	1	0.565555
chr12	8032703	8055503	8044103	ENSG00000065970.8	+	protein_coding	KNOWN	FOXJ2	3	11	0.617902
chr12	8058302	8066471	8062386	ENSG00000171860.4	-	protein_coding	KNOWN	C3AR1	2	2	0.796749
chr12	8080381	8082163	8081272	ENSG00000279865.1	-	TEC	KNOWN	RP11-69M1.6	1	1	0.429387
chr12	8082211	8097771	8089991	ENSG00000089818.16	+	protein_coding	KNOWN	NECAP1	9	8	0.463564
chr12	8123632	8138607	8131119	ENSG00000111729.12	+	protein_coding	KNOWN	CLEC4A	5	6	0.193874
chr12	8133772	8134849	8134310	ENSG00000235602.5	-	processed_pseudogene	KNOWN	POU5F1P3	1	1	0.222576
chr12	8138137	8188537	8163337	ENSG00000196946.9	+	protein_coding	KNOWN	ZNF705A	5	6	0.006545
chr12	8141168	8142697	8141932	ENSG00000256171.1	-	processed_pseudogene	KNOWN	GCSHP4	1	2	0.222576
chr12	8180209	8216151	8198180	ENSG00000226711.6	+	antisense	KNOWN	FAM66C	9	8	0.209836
chr12	8199599	8218911	8209255	ENSG00000244050.2	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-266K4.1	2	3	0.262137
chr12	8205984	8207397	8206690	ENSG00000276417.1	+	lincRNA	KNOWN	RP11-266K4.13	1	1	0.434384
chr12	8217758	8221115	8219436	ENSG00000275367.1	+	lincRNA	KNOWN	RP11-266K4.14	1	1	0.061131
chr12	8221260	8227618	8224439	ENSG00000171847.10	-	protein_coding	KNOWN	FAM90A1	3	7	0.061131
chr12	8227734	8231764	8229749	ENSG00000254016.2	+	unprocessed_pseudogene	KNOWN	ALG1L10P	1	4	0.430386
chr12	8232512	8242948	8237730	ENSG00000164845.16	-	transcribed_unprocessed_pseudogene	KNOWN	FAM86FP	2	8	0.904246
chr12	8235415	8242564	8238989	ENSG00000215241.3	+	lincRNA	KNOWN	RP11-266K4.9	3	3	0.904246
chr12	8254527	8308849	8281688	ENSG00000256589.1	-	unprocessed_pseudogene	KNOWN	ENPP7P5	1	3	0.191559
chr12	8295986	8396803	8346394	ENSG00000226091.7	-	lincRNA	KNOWN	LINC00937	7	7	-0.039901
chr12	8320381	8369555	8344968	ENSG00000256552.2	+	transcribed_processed_pseudogene	KNOWN	RP11-113C12.4	2	2	-0.109387
chr12	8321876	8329614	8325745	ENSG00000256101.5	+	lincRNA	KNOWN	RP11-90D4.3	2	3	-0.072819
chr12	8340182	8340397	8340289	ENSG00000277952.1	+	processed_pseudogene	KNOWN	RP11-90D4.4	1	1	-0.052743
chr12	8359054	8359834	8359444	ENSG00000242661.1	-	processed_pseudogene	KNOWN	RPS3AP43	1	1	-0.185303
chr12	8366686	8366831	8366758	ENSG00000221104.1	+	miRNA	NOVEL	AC092865.1	1	1	-0.185303
chr12	8406833	8407195	8407014	ENSG00000256136.1	-	processed_pseudogene	KNOWN	RP11-113C12.8	1	1	0.400942
chr12	8414780	8415805	8415292	ENSG00000238152.2	-	unprocessed_pseudogene	KNOWN	OR7E140P	1	1	0.019479
chr12	8426600	8426687	8426643	ENSG00000266218.1	-	miRNA	NOVEL	AC092865.2	1	1	0.019479
chr12	8427640	8428610	8428125	ENSG00000214487.3	-	unprocessed_pseudogene	KNOWN	OR7E148P	1	1	0.019479
chr12	8437403	8438425	8437914	ENSG00000177586.6	-	unprocessed_pseudogene	KNOWN	OR7E149P	1	1	0.320261
chr12	8455926	8478330	8467128	ENSG00000205846.3	+	protein_coding	KNOWN	CLEC6A	1	6	-0.087618
chr12	8460618	8461232	8460925	ENSG00000243830.2	+	processed_pseudogene	KNOWN	RP11-113C12.2	1	1	-0.033539
chr12	8484746	8484852	8484799	ENSG00000201780.1	+	snRNA	KNOWN	RNU6-275P	1	1	-0.178970
chr12	8509475	8522366	8515920	ENSG00000166527.7	+	protein_coding	KNOWN	CLEC4D	2	6	-0.115037
chr12	8512374	8512726	8512550	ENSG00000246115.3	-	processed_pseudogene	KNOWN	SUPT4H1P2	1	1	-0.111542
chr12	8533305	8540963	8537134	ENSG00000166523.7	-	protein_coding	KNOWN	CLEC4E	6	6	-0.092040
chr12	8548361	8567613	8557987	ENSG00000255801.1	-	lincRNA	KNOWN	RP11-561P12.5	1	3	-0.132090
chr12	8592476	8592585	8592530	ENSG00000238943.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.083628
chr12	8597509	8597640	8597574	ENSG00000252727.1	+	scaRNA	NOVEL	SCARNA11	1	1	0.083628
chr12	8602166	8612871	8607518	ENSG00000111732.10	-	protein_coding	KNOWN	AICDA	6	5	0.046406
chr12	8631545	8632259	8631902	ENSG00000280345.1	-	TEC	KNOWN	RP11-438L7.1	1	1	0.299434
chr12	8634367	8637608	8635987	ENSG00000255967.1	+	processed_pseudogene	KNOWN	RP11-438L7.3	1	2	0.299434
chr12	8637346	8662888	8650117	ENSG00000197614.10	-	protein_coding	KNOWN	MFAP5	15	11	0.326075
chr12	8664011	8669011	8666511	ENSG00000255829.1	+	antisense	KNOWN	RP11-20D14.3	2	2	0.352228
chr12	8678773	8679670	8679221	ENSG00000256004.1	+	processed_pseudogene	KNOWN	RP11-20D14.4	1	2	0.471696
chr12	8681600	8783095	8732347	ENSG00000166532.15	+	protein_coding	KNOWN	RIMKLB	13	9	0.248318
chr12	8742428	8743072	8742750	ENSG00000244131.2	+	processed_pseudogene	KNOWN	RPSAP51	1	1	0.285673
chr12	8776219	8830947	8803583	ENSG00000256661.1	-	antisense	KNOWN	A2ML1-AS1	1	2	0.374766
chr12	8788257	8795789	8792023	ENSG00000249790.2	+	lincRNA	KNOWN	RP11-20D14.6	3	3	0.361565
chr12	8819816	8820713	8820264	ENSG00000256904.1	-	antisense	KNOWN	A2ML1-AS2	1	2	0.558013
chr12	8822472	8887001	8854736	ENSG00000166535.19	+	protein_coding	KNOWN	A2ML1	9	36	0.242314
chr12	8858143	8915276	8886709	ENSG00000282022.1	-	antisense	KNOWN	RP11-259O18.5	1	2	0.109259
chr12	8913896	8941467	8927681	ENSG00000111752.10	+	protein_coding	KNOWN	PHC1	14	18	0.254112
chr12	8940363	8949955	8945159	ENSG00000003056.7	-	protein_coding	KNOWN	M6PR	13	7	0.216918
chr12	8950044	9010760	8980402	ENSG00000139187.9	+	protein_coding	KNOWN	KLRG1	7	6	-0.107439
chr12	8987175	8996566	8991870	ENSG00000257105.1	-	antisense	KNOWN	RP11-259O18.4	1	3	-0.241758
chr12	9027532	9029089	9028310	ENSG00000213049.3	-	processed_pseudogene	KNOWN	HNRNPA1P34	1	2	-0.085249
chr12	9036344	9037244	9036794	ENSG00000255776.1	+	processed_pseudogene	KNOWN	VDAC2P2	1	1	-0.227888
chr12	9055586	9065070	9060328	ENSG00000214851.4	-	processed_transcript	KNOWN	LINC00612	1	3	-0.285765
chr12	9065177	9068060	9066618	ENSG00000245105.2	+	antisense	KNOWN	A2M-AS1	1	3	-0.285765
chr12	9067664	9116229	9091946	ENSG00000175899.14	-	protein_coding	KNOWN	A2M	13	36	-0.069854
chr12	9127783	9128645	9128214	ENSG00000256937.1	+	processed_pseudogene	KNOWN	KRT17P8	1	1	0.110851
chr12	9127871	9127985	9127928	ENSG00000211542.1	+	miRNA	NOVEL	AC007436.1	1	1	0.110851
chr12	9135084	9135591	9135337	ENSG00000256720.1	+	processed_pseudogene	KNOWN	BTG1P1	1	1	-0.414544
chr12	9148840	9208370	9178605	ENSG00000126838.9	-	protein_coding	KNOWN	PZP	7	36	-0.173067
chr12	9155881	9156372	9156126	ENSG00000256817.1	-	processed_pseudogene	KNOWN	TPT1P12	1	1	-0.226184
chr12	9228533	9275817	9252175	ENSG00000256069.7	-	transcribed_unprocessed_pseudogene	KNOWN	A2MP1	4	32	-0.213610
chr12	9239986	9240331	9240158	ENSG00000231503.4	-	processed_pseudogene	KNOWN	PTMAP4	1	1	-0.330388
chr12	9240003	9243052	9241527	ENSG00000237248.4	+	lincRNA	KNOWN	LINC00987	1	2	-0.330388
chr12	9246497	9257960	9252228	ENSG00000256427.1	+	lincRNA	KNOWN	RP11-118B22.4	1	3	-0.202123
chr12	9277235	9313241	9295238	ENSG00000111788.10	+	unprocessed_pseudogene	KNOWN	RP11-22B23.1	1	29	0.216747
chr12	9286673	9286822	9286747	ENSG00000212440.1	-	snoRNA	NOVEL	SNORA75	1	1	-0.056872
chr12	9314402	9316173	9315287	ENSG00000255753.1	-	processed_pseudogene	KNOWN	RP11-22B23.2	1	5	0.491262
chr12	9367464	9397617	9382540	ENSG00000260423.1	+	lincRNA	KNOWN	RP13-735L24.1	1	4	0.170418
chr12	9398355	9414851	9406603	ENSG00000256673.1	-	unprocessed_pseudogene	KNOWN	RP11-599J14.2	1	4	0.214901
chr12	9415641	9416718	9416179	ENSG00000278635.1	+	unprocessed_pseudogene	KNOWN	CTD-2318O12.1	1	4	0.408324
chr12	9418673	9448229	9433451	ENSG00000214826.5	-	unprocessed_pseudogene	KNOWN	DDX12P	1	27	0.403607
chr12	9445058	9445205	9445131	ENSG00000212432.1	+	snoRNA	NOVEL	SNORA75	1	1	0.400677
chr12	9467552	9576275	9521913	ENSG00000214776.9	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-726G1.1	2	23	-0.488069
chr12	9506347	9508440	9507393	ENSG00000256975.1	-	processed_pseudogene	KNOWN	RP11-525E9.1	1	2	-1.203464
chr12	9594551	9607886	9601218	ENSG00000111796.3	-	protein_coding	KNOWN	KLRB1	1	6	-0.386662
chr12	9617284	9658412	9637848	ENSG00000256594.7	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-705C15.2	7	5	-0.126656
chr12	9624122	9624228	9624175	ENSG00000212345.1	-	snRNA	KNOWN	RNU6-700P	1	1	0.138088
chr12	9641723	9643011	9642367	ENSG00000233719.4	+	transcribed_processed_pseudogene	KNOWN	GOT2P3	1	1	-0.361726
chr12	9642872	9657070	9649971	ENSG00000272917.1	+	processed_transcript	KNOWN	RP11-705C15.5	1	4	-0.165615
chr12	9647014	9648009	9647511	ENSG00000256442.1	-	antisense	KNOWN	RP11-705C15.4	1	2	-0.361726
chr12	9658567	9662085	9660326	ENSG00000257027.1	+	sense_intronic	KNOWN	RP11-705C15.3	1	2	0.032049
chr12	9664969	9699555	9682262	ENSG00000069493.14	+	protein_coding	KNOWN	CLEC2D	16	7	-0.003572
chr12	9695384	9696227	9695805	ENSG00000213443.2	+	processed_pseudogene	KNOWN	RP11-75L1.2	1	1	-0.024261
chr12	9704077	9709350	9706713	ENSG00000256582.1	+	lincRNA	KNOWN	RP11-75L1.1	1	2	-0.024261
chr12	9715860	9733299	9724579	ENSG00000184293.7	-	protein_coding	KNOWN	CLECL1	4	3	-0.042249
chr12	9752486	9760901	9756693	ENSG00000110848.8	-	protein_coding	KNOWN	CD69	4	5	-0.356154
chr12	9817350	9818025	9817687	ENSG00000256912.1	-	processed_pseudogene	KNOWN	RP11-75L1.6	1	2	-0.290624
chr12	9827481	9845007	9836244	ENSG00000150045.11	+	protein_coding	KNOWN	KLRF1	8	6	-0.305665
chr12	9852984	9870136	9861560	ENSG00000110852.4	-	protein_coding	KNOWN	CLEC2B	4	5	-0.380328
chr12	9867027	9869808	9868417	ENSG00000255882.1	+	antisense	KNOWN	RP11-290C10.1	1	2	-0.381939
chr12	9881489	9895833	9888661	ENSG00000256797.1	+	protein_coding	KNOWN	KLRF2	1	6	-0.191670
chr12	9898673	9932381	9915527	ENSG00000188393.8	-	protein_coding	KNOWN	CLEC2A	2	5	-0.153334
chr12	9936579	9943495	9940037	ENSG00000225231.1	-	lincRNA	KNOWN	AC091814.2	1	5	-0.396627
chr12	9948137	9953336	9950736	ENSG00000231560.1	-	lincRNA	KNOWN	AC091814.3	1	3	-0.185366
chr12	9951316	9995694	9973505	ENSG00000172322.13	+	protein_coding	KNOWN	CLEC12A	7	7	-0.309336
chr12	9985642	10013424	9999533	ENSG00000165682.14	-	protein_coding	KNOWN	CLEC1B	4	7	-0.518511
chr12	10010627	10018619	10014623	ENSG00000256660.5	+	protein_coding	KNOWN	CLEC12B	5	6	-0.123468
chr12	10015240	10030606	10022923	ENSG00000256803.1	-	antisense	KNOWN	RP11-133L14.5	1	3	-0.120141
chr12	10030677	10066027	10048352	ENSG00000197992.6	+	protein_coding	KNOWN	CLEC9A	3	9	-0.092158
chr12	10040848	10045711	10043279	ENSG00000256626.1	+	unprocessed_pseudogene	KNOWN	RP11-133L14.2	1	4	-0.039253
chr12	10069554	10111627	10090590	ENSG00000150048.10	-	protein_coding	KNOWN	CLEC1A	5	6	0.046479
chr12	10084186	10084490	10084338	ENSG00000223042.1	+	misc_RNA	KNOWN	RN7SKP161	1	1	0.004529
chr12	10111738	10112471	10112104	ENSG00000255734.1	+	processed_pseudogene	KNOWN	HNRNPABP1	1	1	0.058044
chr12	10116777	10130258	10123517	ENSG00000172243.17	-	protein_coding	KNOWN	CLEC7A	13	8	0.057436
chr12	10158301	10172138	10165219	ENSG00000173391.8	-	protein_coding	KNOWN	OLR1	11	6	0.278031
chr12	10170542	10191801	10181171	ENSG00000165685.8	+	protein_coding	KNOWN	TMEM52B	6	6	0.246199
chr12	10212458	10223130	10217794	ENSG00000139112.10	+	protein_coding	KNOWN	GABARAPL1	19	6	0.447087
chr12	10214161	10214761	10214461	ENSG00000255958.1	-	antisense	KNOWN	RP11-656E20.5	1	2	0.447087
chr12	10226058	10329600	10277829	ENSG00000134539.16	+	protein_coding	KNOWN	KLRD1	11	7	0.104534
chr12	10332861	10338292	10335576	ENSG00000256288.1	-	lincRNA	KNOWN	RP11-277P12.10	1	3	0.100762
chr12	10358464	10361045	10359754	ENSG00000256155.1	-	lincRNA	KNOWN	RP11-277P12.9	1	2	-0.082259
chr12	10363769	10398506	10381137	ENSG00000245648.1	+	antisense	KNOWN	RP11-277P12.20	1	4	-0.195197
chr12	10372353	10410146	10391249	ENSG00000255819.7	-	protein_coding	KNOWN	KLRC4-KLRK1	13	13	-0.288974
chr12	10372353	10391874	10382113	ENSG00000213809.8	-	protein_coding	KNOWN	KLRK1	5	8	-0.160102
chr12	10407382	10409757	10408569	ENSG00000183542.5	-	protein_coding	KNOWN	KLRC4	1	4	-0.427118
chr12	10412312	10420595	10416453	ENSG00000205810.8	-	protein_coding	KNOWN	KLRC3	2	7	-0.369588
chr12	10412312	10436001	10424156	ENSG00000255641.1	-	protein_coding	KNOWN	RP11-277P12.6	1	7	-0.298612
chr12	10426854	10442300	10434577	ENSG00000205809.9	-	protein_coding	KNOWN	KLRC2	6	7	-0.146494
chr12	10442264	10454685	10448474	ENSG00000134545.13	-	protein_coding	KNOWN	KLRC1	7	9	-0.173064
chr12	10505602	10523135	10514368	ENSG00000180574.3	+	protein_coding	KNOWN	EIF2S3L	2	2	-0.375199
chr12	10551266	10551535	10551400	ENSG00000257016.1	-	processed_pseudogene	KNOWN	SLC25A39P2	1	1	-0.165396
chr12	10553363	10558049	10555706	ENSG00000256039.1	+	lincRNA	KNOWN	RP11-291B21.2	1	2	-0.165396
chr12	10588063	10599669	10593866	ENSG00000256667.6	-	transcribed_unprocessed_pseudogene	KNOWN	KLRAP1	3	7	-0.501571
chr12	10604190	10613623	10608906	ENSG00000111196.9	-	protein_coding	KNOWN	MAGOHB	11	6	-0.369772
chr12	10618939	10674318	10646628	ENSG00000060140.8	-	protein_coding	KNOWN	STYK1	6	11	-0.044413
chr12	10699089	10723312	10711200	ENSG00000060138.12	-	protein_coding	KNOWN	YBX3	18	10	0.006194
chr12	10750234	10777444	10763839	ENSG00000256888.5	+	lincRNA	KNOWN	RP13-81N3.2	3	7	-0.248907
chr12	10770305	10770605	10770455	ENSG00000235930.3	+	processed_pseudogene	KNOWN	HSPE1P12	1	1	-0.535199
chr12	10801532	10802627	10802079	ENSG00000121377.2	-	protein_coding	KNOWN	TAS2R7	1	1	-0.334273
chr12	10806051	10807293	10806672	ENSG00000121314.2	-	protein_coding	KNOWN	TAS2R8	1	1	-0.334273
chr12	10809137	10810168	10809652	ENSG00000121381.3	-	protein_coding	KNOWN	TAS2R9	1	1	-0.414515
chr12	10824960	11171544	10998252	ENSG00000231887.6	-	protein_coding	KNOWN	PRH1	6	5	-0.236487
chr12	10825317	10826358	10825837	ENSG00000121318.2	-	protein_coding	KNOWN	TAS2R10	1	1	-0.823795
chr12	10831074	10832016	10831545	ENSG00000256651.1	-	processed_pseudogene	KNOWN	RP11-144O23.8	1	1	-0.371955
chr12	10845849	11171598	11008723	ENSG00000275778.1	-	protein_coding	KNOWN	PRH1-PRR4	1	10	-0.220773
chr12	10845849	11171613	11008731	ENSG00000111215.11	-	protein_coding	KNOWN	PRR4	14	6	-0.220763
chr12	10894943	10896952	10895947	ENSG00000256682.2	-	transcribed_processed_pseudogene	KNOWN	TAS2R12	2	2	-0.382327
chr12	10907926	10909562	10908744	ENSG00000212128.2	-	protein_coding	KNOWN	TAS2R13	1	1	-0.382327
chr12	10929236	10932341	10930788	ENSG00000134551.12	+	protein_coding	KNOWN	PRH2	2	4	-0.256986
chr12	10937406	11171573	11054489	ENSG00000212127.5	-	protein_coding	KNOWN	TAS2R14	2	5	-0.228480
chr12	10964425	10965352	10964888	ENSG00000212125.2	-	processed_pseudogene	KNOWN	TAS2R15P	1	1	-0.247983
chr12	10985913	10986912	10986412	ENSG00000212126.3	-	protein_coding	KNOWN	TAS2R50	1	1	-0.064127
chr12	10996495	10997875	10997185	ENSG00000255837.1	-	protein_coding	KNOWN	TAS2R20	1	1	-0.152427
chr12	11021619	11022620	11022119	ENSG00000212124.2	-	protein_coding	KNOWN	TAS2R19	1	1	-0.109215
chr12	11030387	11031407	11030897	ENSG00000256436.1	-	protein_coding	KNOWN	TAS2R31	1	1	-0.537365
chr12	11048332	11049256	11048794	ENSG00000256019.1	-	processed_pseudogene	KNOWN	TAS2R63P	1	1	-0.537365
chr12	11061365	11062294	11061829	ENSG00000226761.3	-	protein_coding	KNOWN	TAS2R46	1	1	-0.390401
chr12	11076769	11079171	11077970	ENSG00000256274.1	-	transcribed_processed_pseudogene	KNOWN	TAS2R64P	2	1	-0.212265
chr12	11091287	11134244	11112765	ENSG00000255374.2	-	protein_coding	KNOWN	TAS2R43	2	2	0.007812
chr12	11097179	11097274	11097226	ENSG00000256400.1	-	processed_pseudogene	KNOWN	RP11-673D15.7	1	1	0.133019
chr12	11132958	11134644	11133801	ENSG00000256188.3	-	protein_coding	KNOWN	TAS2R30	1	1	-0.203833
chr12	11158785	11159694	11159239	ENSG00000256981.1	-	processed_pseudogene	KNOWN	TAS2R18	1	1	-0.652751
chr12	11166090	11171353	11168721	ENSG00000256712.1	-	sense_intronic	KNOWN	RP11-785H5.2	1	2	-0.486443
chr12	11171222	11176016	11173619	ENSG00000256537.4	+	protein_coding	KNOWN	SMIM10L1	1	1	-0.006310
chr12	11185993	11186937	11186465	ENSG00000186136.1	-	protein_coding	KNOWN	TAS2R42	1	1	-0.006310
chr12	11196075	11196996	11196535	ENSG00000256657.1	-	processed_pseudogene	KNOWN	RP11-144O23.22	1	1	-0.191801
chr12	11212219	11251389	11231804	ENSG00000275119.1	+	lincRNA	KNOWN	RP11-711K1.8	1	2	-0.303163
chr12	11265924	11269805	11267864	ENSG00000197870.12	-	protein_coding	KNOWN	PRB3	3	5	-0.100653
chr12	11307083	11310435	11308759	ENSG00000230657.6	-	protein_coding	KNOWN	PRB4	4	5	-0.128765
chr12	11351823	11395566	11373694	ENSG00000251655.6	-	protein_coding	KNOWN	PRB1	4	5	-0.234421
chr12	11391540	11501041	11446290	ENSG00000121335.11	-	protein_coding	KNOWN	PRB2	3	4	-0.188918
chr12	11399381	11486678	11443029	ENSG00000255790.5	-	sense_intronic	KNOWN	RP11-711K1.7	4	6	-0.180552
chr12	11467499	11467566	11467532	ENSG00000281730.1	+	miRNA	NOVEL	AC078950.1	1	1	-0.254459
chr12	11481383	11481656	11481519	ENSG00000237303.2	+	processed_pseudogene	KNOWN	HIGD1AP8	1	1	-0.149669
chr12	11500499	11501022	11500760	ENSG00000278654.1	+	processed_pseudogene	KNOWN	RP11-434C1.4	1	1	-0.347430
chr12	11507162	11507408	11507285	ENSG00000277705.1	-	processed_pseudogene	KNOWN	RP11-434C1.5	1	1	-0.347430
chr12	11512723	11514136	11513429	ENSG00000270863.1	+	processed_pseudogene	KNOWN	DDX55P1	1	1	-0.103928
chr12	11516425	11521686	11519055	ENSG00000274551.1	-	unprocessed_pseudogene	KNOWN	RP11-434C1.6	1	2	-0.103928
chr12	11541395	11555838	11548616	ENSG00000256237.1	-	lincRNA	KNOWN	RP11-434C1.2	1	2	-0.154493
chr12	11541923	11542045	11541984	ENSG00000221128.1	-	miRNA	NOVEL	AC007450.1	1	1	-0.248433
chr12	11546479	11546540	11546509	ENSG00000251747.1	+	snRNA	KNOWN	RNU7-60P	1	1	-0.248433
chr12	11548030	11590369	11569199	ENSG00000247157.6	+	lincRNA	KNOWN	LINC01252	3	8	-0.124998
chr12	11649854	11895402	11772628	ENSG00000139083.10	+	protein_coding	KNOWN	ETV6	5	8	0.317310
chr12	12049844	12211084	12130464	ENSG00000121380.12	+	protein_coding	KNOWN	BCL2L14	14	8	0.184986
chr12	12111163	12111489	12111326	ENSG00000198134.3	+	processed_pseudogene	KNOWN	RP11-267J23.4	1	1	0.050172
chr12	12116025	12267012	12191518	ENSG00000070018.8	-	protein_coding	KNOWN	LRP6	7	24	0.111700
chr12	12155262	12155772	12155517	ENSG00000242405.2	+	processed_pseudogene	KNOWN	RP11-267J23.1	1	1	0.186770
chr12	12226674	12226777	12226725	ENSG00000199551.1	+	snRNA	KNOWN	RNU6-545P	1	1	-0.001118
chr12	12248991	12249427	12249209	ENSG00000270857.1	+	processed_pseudogene	KNOWN	RP11-757G14.3	1	1	0.046429
chr12	12289227	12289329	12289278	ENSG00000207010.1	-	snRNA	KNOWN	RNU6-318P	1	1	0.421115
chr12	12326056	12350541	12338298	ENSG00000111261.13	-	protein_coding	KNOWN	MANSC1	4	5	0.398920
chr12	12338776	12339254	12339015	ENSG00000243141.2	+	processed_pseudogene	KNOWN	RPL23AP66	1	1	0.447087
chr12	12355406	12357067	12356236	ENSG00000205791.3	-	lincRNA	KNOWN	LOH12CR2	1	2	-0.178778
chr12	12357079	12469694	12413386	ENSG00000165714.10	+	protein_coding	KNOWN	BORCS5	4	4	0.186385
chr12	12452103	12452481	12452292	ENSG00000271370.1	-	processed_pseudogene	KNOWN	RP11-253I19.4	1	1	0.532120
chr12	12474210	12562383	12518296	ENSG00000111266.8	-	protein_coding	KNOWN	DUSP16	6	7	0.122313
chr12	12485353	12491581	12488467	ENSG00000255670.1	+	lincRNA	KNOWN	RP11-253I19.3	1	2	0.184216
chr12	12568201	12568776	12568488	ENSG00000240424.2	-	processed_pseudogene	KNOWN	RP11-158N24.1	1	1	0.178927
chr12	12611827	12645108	12628467	ENSG00000111269.2	+	protein_coding	KNOWN	CREBL2	2	4	0.459932
chr12	12614359	12615907	12615133	ENSG00000271215.1	-	processed_pseudogene	KNOWN	RPL21P136	1	4	0.752299
chr12	12648939	12649713	12649326	ENSG00000275963.1	+	lincRNA	KNOWN	RP11-180M15.6	1	1	0.108294
chr12	12660891	12696207	12678549	ENSG00000183150.7	-	protein_coding	KNOWN	GPR19	5	4	0.203595
chr12	12668982	12685075	12677028	ENSG00000257004.1	+	lincRNA	KNOWN	RP11-180M15.3	1	2	0.123116
chr12	12715058	12722371	12718714	ENSG00000111276.10	+	protein_coding	KNOWN	CDKN1B	4	4	0.584016
chr12	12718973	12719521	12719247	ENSG00000275560.1	+	sense_intronic	KNOWN	RP11-180M15.7	1	1	0.584016
chr12	12723297	12724011	12723654	ENSG00000256658.1	-	antisense	KNOWN	RP11-180M15.4	1	2	0.584016
chr12	12725917	12829975	12777946	ENSG00000178878.12	+	protein_coding	KNOWN	APOLD1	5	15	0.366383
chr12	12764649	12764743	12764696	ENSG00000207983.1	+	miRNA	KNOWN	MIR613	1	1	0.157746
chr12	12771351	12771705	12771528	ENSG00000270296.1	-	processed_pseudogene	KNOWN	STX8P1	1	1	0.230189
chr12	12813316	12829981	12821648	ENSG00000213782.7	+	protein_coding	KNOWN	DDX47	12	12	0.502703
chr12	12840804	12841079	12840941	ENSG00000242329.1	-	processed_pseudogene	KNOWN	RP11-59H1.1	1	1	0.579786
chr12	12850982	12851740	12851361	ENSG00000241352.3	+	processed_pseudogene	KNOWN	RP11-392P7.1	1	1	0.316865
chr12	12875499	12876107	12875803	ENSG00000234498.3	+	processed_pseudogene	KNOWN	RPL13AP20	1	1	0.389672
chr12	12890782	12917937	12904359	ENSG00000013588.5	+	protein_coding	KNOWN	GPRC5A	5	4	0.910603
chr12	12915829	12915918	12915873	ENSG00000207817.1	+	miRNA	KNOWN	MIR614	1	1	0.818231
chr12	12927726	12984645	12956185	ENSG00000247498.9	+	antisense	KNOWN	RP11-392P7.6	9	4	0.342179
chr12	12940775	12952147	12946461	ENSG00000111291.8	-	protein_coding	KNOWN	GPRC5D	3	3	0.303730
chr12	12962300	12963539	12962919	ENSG00000256011.1	+	antisense	KNOWN	RP11-392P7.7	1	2	0.229495
chr12	12972053	12972143	12972098	ENSG00000221611.1	+	snoRNA	NOVEL	SNORD88	1	1	0.451073
chr12	12974864	13000273	12987568	ENSG00000013583.8	-	protein_coding	KNOWN	HEBP1	4	4	0.478884
chr12	13000420	13004830	13002625	ENSG00000183935.5	+	transcribed_processed_pseudogene	KNOWN	HTR7P1	2	1	0.519853
chr12	13000451	13040679	13020565	ENSG00000255621.1	+	lincRNA	KNOWN	RP11-377D9.3	1	5	0.336367
chr12	13021260	13021606	13021433	ENSG00000243129.2	-	processed_pseudogene	KNOWN	RP11-377D9.1	1	1	0.173522
chr12	13044284	13142521	13093402	ENSG00000084444.13	+	protein_coding	KNOWN	FAM234B	6	14	0.298419
chr12	13083560	13103683	13093621	ENSG00000111305.18	-	protein_coding	KNOWN	GSG1	9	7	0.368715
chr12	13196716	13219939	13208327	ENSG00000134531.9	+	protein_coding	KNOWN	EMP1	12	5	0.369592
chr12	13371089	13387167	13379128	ENSG00000180861.9	-	lincRNA	KNOWN	LINC01559	5	4	-0.095432
chr12	13440884	13441001	13440942	ENSG00000201476.1	-	rRNA	KNOWN	RNA5SP353	1	1	-0.306874
chr12	13459670	13459776	13459723	ENSG00000201909.1	-	snRNA	KNOWN	RNU6-590P	1	1	-0.310107
chr12	13526854	13547582	13537218	ENSG00000256306.1	+	processed_transcript	KNOWN	RP11-4N23.1	2	2	-0.176759
chr12	13537337	13981957	13759647	ENSG00000273079.4	-	protein_coding	KNOWN	GRIN2B	4	13	-0.288896
chr12	13540231	13544540	13542385	ENSG00000277935.1	+	lincRNA	KNOWN	RP11-4N23.4	1	2	-0.126903
chr12	13587880	13587984	13587932	ENSG00000252445.1	-	miRNA	NOVEL	AC007535.1	1	1	0.107933
chr12	13683542	13683886	13683714	ENSG00000200475.1	+	misc_RNA	KNOWN	RN7SKP162	1	1	-0.305528
chr12	14126008	14126074	14126041	ENSG00000274302.1	+	miRNA	NOVEL	AC092470.1	1	1	-0.405023
chr12	14169746	14169877	14169811	ENSG00000256346.1	+	processed_pseudogene	KNOWN	RP11-72J9.1	1	1	-0.000037
chr12	14192002	14192284	14192143	ENSG00000227760.2	+	processed_pseudogene	KNOWN	RP11-298E10.1	1	1	-0.357619
chr12	14216590	14221297	14218943	ENSG00000256084.1	+	lincRNA	KNOWN	RP11-134N1.2	1	2	0.091992
chr12	14237091	14237321	14237206	ENSG00000255763.1	+	processed_pseudogene	KNOWN	MRPS18CP4	1	1	-0.004224
chr12	14250232	14250341	14250286	ENSG00000251908.1	-	snRNA	KNOWN	RNU6-491P	1	1	0.151493
chr12	14254912	14255226	14255069	ENSG00000255749.1	+	processed_pseudogene	KNOWN	GNAI2P1	1	1	0.151493
chr12	14356842	14365503	14361172	ENSG00000244573.3	-	transcribed_processed_pseudogene	KNOWN	RPL30P11	3	2	0.131305
chr12	14365632	14502935	14434283	ENSG00000171681.12	+	protein_coding	KNOWN	ATF7IP	24	15	-0.078689
chr12	14503661	14568349	14536005	ENSG00000121316.10	-	protein_coding	KNOWN	PLBD1	4	11	-0.262579
chr12	14530151	14533229	14531690	ENSG00000255649.1	+	antisense	KNOWN	RP11-502N13.2	1	3	-0.451748
chr12	14553702	14553970	14553836	ENSG00000200830.1	-	misc_RNA	KNOWN	RN7SKP134	1	1	-0.346378
chr12	14567750	14619755	14593752	ENSG00000256751.5	+	antisense	KNOWN	PLBD1-AS1	2	5	0.003290
chr12	14612632	14696585	14654608	ENSG00000070019.4	-	protein_coding	KNOWN	GUCY2C	2	27	-0.303224
chr12	14665655	14757963	14711809	ENSG00000214772.2	+	antisense	KNOWN	RP11-174G6.1	1	5	-0.124565
chr12	14762504	14767931	14765217	ENSG00000261324.2	-	sense_overlapping	KNOWN	RP11-174G6.5	1	1	-0.118043
chr12	14767999	14771131	14769565	ENSG00000197837.3	-	protein_coding	KNOWN	HIST4H4	6	2	-0.113461
chr12	14774383	14778002	14776192	ENSG00000246705.4	+	protein_coding	KNOWN	H2AFJ	3	2	-0.105366
chr12	14774716	14774860	14774788	ENSG00000281457.1	-	miRNA	NOVEL	AC010168.1	1	1	-0.105366
chr12	14784579	14803540	14794059	ENSG00000084463.7	-	protein_coding	KNOWN	WBP11	5	12	0.035577
chr12	14803572	14906586	14855079	ENSG00000182993.3	+	protein_coding	KNOWN	C12orf60	4	4	-0.053374
chr12	14804650	14814182	14809416	ENSG00000179256.2	-	protein_coding	KNOWN	SMCO3	1	2	-0.041148
chr12	14825569	14843495	14834532	ENSG00000111339.10	-	protein_coding	KNOWN	ART4	4	3	-0.315533
chr12	14841092	14844708	14842900	ENSG00000256339.1	+	antisense	KNOWN	RP11-233G1.4	1	2	-0.349714
chr12	14881181	14885926	14883553	ENSG00000111341.9	-	protein_coding	KNOWN	MGP	4	5	0.054321
chr12	14914035	14939082	14926558	ENSG00000139055.6	-	protein_coding	KNOWN	ERP27	3	7	-0.150428
chr12	14942017	14961728	14951872	ENSG00000111348.8	-	protein_coding	KNOWN	ARHGDIB	9	7	-0.142743
chr12	14973022	14981865	14977443	ENSG00000139053.2	+	protein_coding	KNOWN	PDE6H	1	4	-0.279102
chr12	15001833	15006683	15004258	ENSG00000255727.1	+	lincRNA	KNOWN	LINC01489	1	4	-0.061020
chr12	15107783	15348675	15228229	ENSG00000134533.6	-	protein_coding	KNOWN	RERG	9	5	-0.424640
chr12	15112363	15114698	15113530	ENSG00000256650.1	-	sense_intronic	KNOWN	RERG-IT1	1	2	-0.622387
chr12	15151923	15155283	15153603	ENSG00000255660.1	+	lincRNA	KNOWN	RERG-AS1	1	3	-0.352310
chr12	15255213	15255823	15255518	ENSG00000256283.1	-	processed_pseudogene	KNOWN	METTL8P1	1	1	-0.380944
chr12	15322397	15597399	15459898	ENSG00000151490.13	+	protein_coding	KNOWN	PTPRO	12	27	-0.321597
chr12	15439527	15440401	15439964	ENSG00000243916.1	+	processed_pseudogene	KNOWN	RP11-6K23.1	1	1	-0.492971
chr12	15620158	15882329	15751243	ENSG00000151491.12	-	protein_coding	KNOWN	EPS8	17	22	0.026858
chr12	15671707	15671810	15671758	ENSG00000200105.1	-	snRNA	KNOWN	RNU6-251P	1	1	-0.040458
chr12	15780068	15782120	15781094	ENSG00000255565.1	+	lincRNA	KNOWN	RP11-6B19.1	1	2	0.043412
chr12	15803164	15804158	15803661	ENSG00000256627.1	+	processed_pseudogene	KNOWN	RP11-6B19.3	1	2	0.234950
chr12	15813493	15828274	15820883	ENSG00000256953.1	-	lincRNA	KNOWN	RP11-6B19.2	1	3	-0.027307
chr12	15882391	15903478	15892934	ENSG00000023734.10	+	protein_coding	KNOWN	STRAP	6	11	0.069538
chr12	15911172	16037282	15974227	ENSG00000023697.12	+	protein_coding	KNOWN	DERA	10	9	-0.049819
chr12	15971890	15972609	15972249	ENSG00000256134.1	-	processed_pseudogene	KNOWN	EGLN3P1	1	1	0.108386
chr12	15988408	15988493	15988450	ENSG00000277216.1	-	miRNA	NOVEL	AC022073.1	1	1	0.108386
chr12	16188485	16277685	16233085	ENSG00000188991.3	-	protein_coding	KNOWN	SLC15A5	1	9	-0.437212
chr12	16347142	16609259	16478200	ENSG00000008394.12	+	protein_coding	KNOWN	MGST1	19	5	-0.269662
chr12	16388101	16388192	16388146	ENSG00000274188.1	+	miRNA	NOVEL	AC007528.2	1	1	-0.145047
chr12	16399274	16402406	16400840	ENSG00000256238.1	-	processed_pseudogene	KNOWN	SUPT16HP1	1	1	-0.247983
chr12	16409255	16409331	16409293	ENSG00000215923.1	-	miRNA	NOVEL	AC007528.1	1	1	-0.247983
chr12	16513445	16514371	16513908	ENSG00000256450.1	+	processed_pseudogene	KNOWN	RP11-424M22.1	1	1	0.117678
chr12	16548373	16610594	16579483	ENSG00000048540.14	-	protein_coding	KNOWN	LMO3	35	7	-0.455563
chr12	16567411	16573940	16570675	ENSG00000256564.1	+	antisense	KNOWN	RP11-424M22.3	1	2	-0.448196
chr12	16693800	16695977	16694888	ENSG00000255871.2	+	lincRNA	KNOWN	RP11-69C13.1	1	1	-0.440503
chr12	16786762	16787845	16787303	ENSG00000255740.2	+	lincRNA	KNOWN	RP11-239A17.1	1	2	-0.310446
chr12	16989126	16989936	16989531	ENSG00000256211.1	+	processed_pseudogene	KNOWN	RP11-1018J11.1	1	2	-0.502016
chr12	16990670	16992083	16991376	ENSG00000213235.3	+	processed_pseudogene	KNOWN	EEF1A1P16	1	1	-0.625421
chr12	17071398	17071505	17071451	ENSG00000212358.1	-	snRNA	KNOWN	RNU6-837P	1	1	-0.508078
chr12	17121716	17122460	17122088	ENSG00000242991.2	+	processed_pseudogene	KNOWN	RPL7P40	1	1	-0.425067
chr12	17383352	17384647	17383999	ENSG00000256896.1	-	processed_pseudogene	KNOWN	PSMC1P8	1	1	-0.863886
chr12	17400399	17400914	17400656	ENSG00000256756.1	+	processed_pseudogene	KNOWN	TIMM17BP1	1	1	-0.236631
chr12	17509353	17589992	17549672	ENSG00000256994.1	-	lincRNA	KNOWN	RP11-871F6.3	1	8	-0.409612
chr12	17589257	17615463	17602360	ENSG00000256389.1	+	lincRNA	KNOWN	RP11-606D9.1	1	2	-0.890217
chr12	17710934	17711046	17710990	ENSG00000206662.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.497920
chr12	18080869	18320107	18200488	ENSG00000111404.6	-	protein_coding	KNOWN	RERGL	5	8	-0.652374
chr12	18247614	18648416	18448015	ENSG00000139144.9	+	protein_coding	KNOWN	PIK3C2G	7	33	-0.295907
chr12	18358443	18358967	18358705	ENSG00000255892.1	-	processed_pseudogene	KNOWN	NDFIP1P1	1	1	-0.071507
chr12	18424663	18425140	18424901	ENSG00000255960.1	+	processed_pseudogene	KNOWN	RP11-459D22.1	1	1	0.060514
chr12	18493051	18493723	18493387	ENSG00000256138.1	+	processed_pseudogene	KNOWN	ZKSCAN7P1	1	1	-0.300923
chr12	18683169	18738057	18710613	ENSG00000139151.14	-	protein_coding	KNOWN	PLCZ1	19	15	-0.364894
chr12	18692762	18694096	18693429	ENSG00000255993.1	+	processed_pseudogene	KNOWN	PSMC1P9	1	1	-0.146168
chr12	18714795	18737878	18726336	ENSG00000255648.1	+	antisense	KNOWN	RP11-361I14.2	1	3	-0.494176
chr12	18738101	18739187	18738644	ENSG00000177938.4	+	protein_coding	KNOWN	CAPZA3	1	1	-0.471534
chr12	19089151	19089888	19089519	ENSG00000227525.4	+	processed_pseudogene	KNOWN	RPL7P6	1	1	-0.315512
chr12	19107854	19108183	19108018	ENSG00000256844.1	-	processed_pseudogene	KNOWN	MEF2BNBP1	1	1	0.100307
chr12	19129752	19376400	19253076	ENSG00000052126.14	+	protein_coding	KNOWN	PLEKHA5	16	32	-0.039513
chr12	19147074	19154659	19150866	ENSG00000253284.2	+	sense_intronic	KNOWN	RP11-282K24.3	1	2	-0.117161
chr12	19176288	19176589	19176438	ENSG00000240993.3	-	misc_RNA	KNOWN	RN7SL459P	1	1	-0.237929
chr12	19303480	19303775	19303627	ENSG00000243854.3	+	misc_RNA	KNOWN	RN7SL67P	1	1	-0.022179
chr12	19404045	19720801	19562423	ENSG00000139154.14	+	protein_coding	KNOWN	AEBP2	7	9	0.077578
chr12	19413153	19413461	19413307	ENSG00000255909.1	+	processed_pseudogene	KNOWN	PDCD5P1	1	1	0.427595
chr12	19418927	19419161	19419044	ENSG00000271462.1	-	processed_pseudogene	KNOWN	RP11-841C19.4	1	1	0.427595
chr12	19445949	19446055	19446002	ENSG00000200247.1	-	snRNA	KNOWN	RNU6-254P	1	1	0.270962
chr12	19456244	19457648	19456946	ENSG00000245205.3	-	processed_pseudogene	KNOWN	EEF1A1P4	1	1	0.020831
chr12	19508904	19509245	19509074	ENSG00000240328.1	+	processed_pseudogene	KNOWN	RP11-841C19.1	1	1	0.289672
chr12	19724435	19724599	19724517	ENSG00000200885.1	+	snRNA	KNOWN	RNU1-146P	1	1	-0.084259
chr12	19775451	20009937	19892694	ENSG00000255910.1	+	lincRNA	KNOWN	RP11-405A12.2	1	5	-0.264559
chr12	19941521	19943018	19942269	ENSG00000256849.1	+	processed_pseudogene	KNOWN	RP11-405A12.1	1	1	-0.167395
chr12	19972865	19972981	19972923	ENSG00000221679.1	+	miRNA	NOVEL	AC087237.1	1	1	-0.301829
chr12	20014780	20098868	20056824	ENSG00000256287.1	+	lincRNA	KNOWN	RP11-664H17.1	1	3	-0.460713
chr12	20120980	20129813	20125396	ENSG00000256499.1	-	lincRNA	KNOWN	CTC-465D4.1	1	5	-0.085926
chr12	20361732	20370262	20365997	ENSG00000256879.1	-	antisense	KNOWN	RP11-284H19.1	1	2	-0.581293
chr12	20369245	20684381	20526813	ENSG00000172572.6	+	protein_coding	KNOWN	PDE3A	3	16	-0.348661
chr12	20449655	20450083	20449869	ENSG00000131982.5	-	processed_pseudogene	KNOWN	UBE2L2	1	1	-0.414551
chr12	20551590	20553012	20552301	ENSG00000256663.1	+	processed_pseudogene	KNOWN	RP11-424C20.2	1	1	-0.214435
chr12	20695355	20753386	20724370	ENSG00000139155.8	+	protein_coding	KNOWN	SLCO1C1	9	16	-0.459339
chr12	20810702	20916911	20863806	ENSG00000111700.12	+	protein_coding	KNOWN	SLCO1B3	5	16	-0.491513
chr12	20815674	21090245	20952959	ENSG00000257046.5	+	protein_coding	KNOWN	RP11-545J16.1	2	16	-0.554648
chr12	20845065	20845260	20845162	ENSG00000256157.1	+	processed_pseudogene	KNOWN	RP11-80N2.2	1	1	-0.786446
chr12	21015696	21092745	21054220	ENSG00000205754.10	+	protein_coding	KNOWN	SLCO1B7	3	13	-0.662663
chr12	21047179	21176895	21112037	ENSG00000257062.6	+	protein_coding	KNOWN	RP11-125O5.2	5	6	-0.596658
chr12	21131202	21239246	21185224	ENSG00000134538.2	+	protein_coding	KNOWN	SLCO1B1	1	15	-0.460429
chr12	21264600	21419594	21342097	ENSG00000084453.16	-	protein_coding	KNOWN	SLCO1A2	17	16	-0.488141
chr12	21354959	21379978	21367468	ENSG00000121351.7	+	protein_coding	KNOWN	IAPP	5	4	-0.326645
chr12	21437615	21471252	21454433	ENSG00000121350.15	+	protein_coding	KNOWN	PYROXD1	9	13	-0.199117
chr12	21447545	21448314	21447929	ENSG00000256021.1	-	processed_pseudogene	KNOWN	TCEB1P31	1	2	-0.056531
chr12	21468911	21501669	21485290	ENSG00000004700.15	-	protein_coding	KNOWN	RECQL	8	16	-0.135759
chr12	21501781	21518408	21510094	ENSG00000111711.9	+	protein_coding	KNOWN	GOLT1B	10	7	-0.108915
chr12	21526307	21537377	21531842	ENSG00000134548.9	+	protein_coding	KNOWN	SPX	7	6	-0.130912
chr12	21536189	21604847	21570518	ENSG00000111713.2	-	protein_coding	KNOWN	GYS2	1	16	-0.293479
chr12	21635342	21757857	21696599	ENSG00000111716.12	-	protein_coding	KNOWN	LDHB	10	8	-0.293337
chr12	21662313	21760032	21711172	ENSG00000256615.1	+	antisense	KNOWN	RP11-59N23.3	1	2	-0.296023
chr12	21759980	21766705	21763342	ENSG00000255644.1	+	antisense	KNOWN	RP11-59N23.1	1	2	-0.336102
chr12	21764955	21775581	21770268	ENSG00000121361.3	-	protein_coding	KNOWN	KCNJ8	2	3	-0.250302
chr12	21797401	21941402	21869401	ENSG00000069431.10	-	protein_coding	KNOWN	ABCC9	6	38	-0.373473
chr12	21827210	21887957	21857583	ENSG00000257022.1	+	antisense	KNOWN	RP11-729I10.2	1	4	-0.496781
chr12	21828360	21828564	21828462	ENSG00000275567.1	-	sense_intronic	KNOWN	RP11-729I10.3	1	1	-0.438523
chr12	22008348	22008880	22008614	ENSG00000255627.1	+	processed_pseudogene	KNOWN	RP11-547L9.1	1	1	-0.345072
chr12	22046174	22065674	22055924	ENSG00000111726.12	+	protein_coding	KNOWN	CMAS	5	8	-0.250902
chr12	22063773	22437041	22250407	ENSG00000111728.10	-	protein_coding	KNOWN	ST8SIA1	15	6	-0.261266
chr12	22104491	22105320	22104905	ENSG00000274624.1	-	sense_intronic	KNOWN	RP11-49G2.3	1	1	-0.124045
chr12	22195469	22195629	22195549	ENSG00000212172.1	-	snRNA	KNOWN	RNU1-149P	1	1	-0.227698
chr12	22395088	22398075	22396581	ENSG00000256714.1	-	lincRNA	KNOWN	RP11-73M14.1	1	2	-0.370535
chr12	22448583	22544546	22496564	ENSG00000111731.12	-	protein_coding	KNOWN	C2CD5	18	28	-0.223992
chr12	22460519	22463914	22462216	ENSG00000256973.1	-	lincRNA	KNOWN	RP11-359J14.2	1	2	-0.245043
chr12	22573425	22575105	22574265	ENSG00000256371.1	+	processed_pseudogene	KNOWN	LRRC34P1	1	3	-0.205689
chr12	22596228	22596551	22596389	ENSG00000256774.1	+	processed_pseudogene	KNOWN	RP11-268P4.2	1	1	-0.536752
chr12	22601425	22618867	22610146	ENSG00000250166.2	+	lincRNA	KNOWN	RP11-268P4.5	1	2	-0.489818
chr12	22609228	22625015	22617121	ENSG00000257023.1	-	antisense	KNOWN	RP11-268P4.4	1	2	-0.448949
chr12	22625075	22690665	22657870	ENSG00000139163.15	+	protein_coding	KNOWN	ETNK1	6	9	-0.167732
chr12	22638464	22638943	22638703	ENSG00000274885.1	+	sense_intronic	KNOWN	RP11-268P4.6	1	1	-0.181027
chr12	22699859	23174125	22936992	ENSG00000256995.6	+	lincRNA	KNOWN	RP11-114G22.1	12	9	-0.377523
chr12	22722229	22722469	22722349	ENSG00000241451.2	+	processed_pseudogene	KNOWN	RPS27P22	1	1	-0.111803
chr12	22742582	22743091	22742836	ENSG00000256923.1	+	lincRNA	KNOWN	RP11-449P1.1	1	2	-0.220891
chr12	23099368	23191587	23145477	ENSG00000256321.5	+	lincRNA	KNOWN	RP11-153K16.1	3	5	-0.561377
chr12	23108458	23108493	23108475	ENSG00000256353.1	-	processed_pseudogene	KNOWN	RP11-686N4.1	1	1	-0.244534
chr12	23181334	23251499	23216416	ENSG00000115934.11	-	lincRNA	KNOWN	RP11-153K16.2	1	2	-0.487928
chr12	23529500	23951032	23740266	ENSG00000134532.15	-	protein_coding	KNOWN	SOX5	16	15	-0.562950
chr12	23637973	23638487	23638230	ENSG00000256473.1	+	antisense	KNOWN	RP11-437F6.1	1	2	-0.552913
chr12	24212421	24212495	24212458	ENSG00000216192.1	+	miRNA	KNOWN	MIR920	1	1	-0.736397
chr12	24213256	24562590	24387923	ENSG00000255864.5	-	lincRNA	KNOWN	RP11-444D3.1	6	5	-0.556631
chr12	24223271	24237965	24230618	ENSG00000256120.1	+	lincRNA	KNOWN	RP11-778H2.1	2	5	-0.703565
chr12	24566964	24584168	24575566	ENSG00000197503.4	-	lincRNA	KNOWN	LINC00477	1	4	-0.428395
chr12	24583561	24584549	24584055	ENSG00000256852.1	+	processed_pseudogene	KNOWN	KNOP1P1	1	1	-0.401340
chr12	24642687	24643166	24642926	ENSG00000244662.1	+	processed_pseudogene	KNOWN	RP11-615I16.1	1	1	-0.417683
chr12	24704565	24774213	24739389	ENSG00000255745.1	+	lincRNA	KNOWN	RP11-625L16.1	1	5	-0.339354
chr12	24706788	24707083	24706935	ENSG00000240481.3	+	misc_RNA	KNOWN	RN7SL38P	1	1	-0.485193
chr12	24810022	24949459	24879740	ENSG00000060982.14	-	protein_coding	KNOWN	BCAT1	10	11	0.170578
chr12	24830421	24836558	24833489	ENSG00000256482.1	+	antisense	KNOWN	RP11-625L16.3	1	2	-0.032763
chr12	24902309	24904681	24903495	ENSG00000278969.1	+	TEC	KNOWN	RP11-662I13.3	1	1	0.303496
chr12	24949163	24960158	24954660	ENSG00000255921.1	+	antisense	KNOWN	RP11-662I13.2	1	4	0.228978
chr12	24967127	24967504	24967315	ENSG00000213736.2	-	processed_pseudogene	KNOWN	RP11-662I13.1	1	1	0.202695
chr12	24993424	24997519	24995471	ENSG00000226397.7	-	lincRNA	KNOWN	C12orf77	3	4	0.273104
chr12	25011415	25020893	25016154	ENSG00000258879.1	+	lincRNA	KNOWN	RP11-713N11.5	1	5	-0.285765
chr12	25021002	25108334	25064668	ENSG00000118308.14	+	protein_coding	KNOWN	LRMP	20	21	-0.273160
chr12	25092715	25093900	25093307	ENSG00000258546.1	-	processed_pseudogene	KNOWN	CENPUP2	1	1	-0.413744
chr12	25096868	25100980	25098924	ENSG00000258449.1	-	antisense	KNOWN	RP11-713N11.4	1	3	-0.413744
chr12	25103124	25103869	25103496	ENSG00000276842.1	-	antisense	KNOWN	RP11-713N11.6	1	1	-0.413744
chr12	25108420	25195162	25151791	ENSG00000118307.18	-	protein_coding	KNOWN	CASC1	13	17	-0.291120
chr12	25195216	25209645	25202430	ENSG00000205707.10	+	protein_coding	KNOWN	LYRM5	11	4	0.001794
chr12	25204789	25250936	25227862	ENSG00000133703.11	-	protein_coding	KNOWN	KRAS	4	6	-0.119036
chr12	25210652	25211233	25210942	ENSG00000274987.1	+	antisense	KNOWN	RP11-295I5.3	1	1	-0.156921
chr12	25225103	25225665	25225384	ENSG00000275197.1	+	antisense	KNOWN	RP11-295I5.4	1	1	-0.156921
chr12	25385670	25386241	25385955	ENSG00000278743.1	-	lincRNA	KNOWN	RP11-707G18.1	1	1	-0.146356
chr12	25404288	25404428	25404358	ENSG00000201439.1	-	snRNA	KNOWN	RNU4-67P	1	1	0.001321
chr12	25409293	25409445	25409369	ENSG00000241846.1	-	processed_pseudogene	KNOWN	RP11-318G8.1	1	1	0.001321
chr12	25409307	25648579	25528943	ENSG00000152936.10	-	protein_coding	KNOWN	LMNTD1	11	10	-0.112918
chr12	25423600	25424942	25424271	ENSG00000279173.1	+	TEC	KNOWN	RP11-318G8.4	1	1	0.020831
chr12	25435581	25436238	25435909	ENSG00000256079.1	-	processed_pseudogene	KNOWN	RP11-318G8.2	1	1	-0.218937
chr12	25440875	25441052	25440963	ENSG00000255988.1	-	processed_pseudogene	KNOWN	TUBB4BP1	1	1	-0.218937
chr12	25585994	25592928	25589461	ENSG00000257009.1	-	sense_intronic	KNOWN	RP11-685B13.2	2	2	0.028121
chr12	25779287	25779569	25779428	ENSG00000222950.1	-	misc_RNA	KNOWN	RN7SKP262	1	1	-0.330865
chr12	25782706	25814171	25798438	ENSG00000256686.1	-	lincRNA	KNOWN	RP11-443N24.2	1	3	-0.024518
chr12	25803298	25804526	25803912	ENSG00000255725.2	+	processed_pseudogene	KNOWN	TDGP1	1	1	0.083771
chr12	25831416	25834182	25832799	ENSG00000256440.1	-	lincRNA	KNOWN	RP11-443N24.3	1	2	-0.076937
chr12	25882955	25885855	25884405	ENSG00000256256.1	-	lincRNA	KNOWN	RP11-443N24.4	1	2	0.073958
chr12	25939329	25959765	25949547	ENSG00000246695.7	-	antisense	KNOWN	RASSF8-AS1	9	7	0.060860
chr12	25959029	26079892	26019460	ENSG00000123094.15	+	protein_coding	KNOWN	RASSF8	16	6	0.019509
chr12	26120026	26125127	26122576	ENSG00000123095.5	-	protein_coding	KNOWN	BHLHE41	3	5	0.313119
chr12	26121991	26299290	26210640	ENSG00000123096.11	+	protein_coding	KNOWN	SSPN	8	4	0.137471
chr12	26125155	26126617	26125886	ENSG00000256894.1	-	antisense	KNOWN	RP11-283G6.3	2	3	0.313119
chr12	26211164	26335856	26273510	ENSG00000256234.1	-	antisense	KNOWN	RP11-283G6.4	1	4	0.084794
chr12	26230819	26319720	26275269	ENSG00000255750.5	-	antisense	KNOWN	RP11-283G6.5	3	3	0.089682
chr12	26273329	26273900	26273614	ENSG00000278095.1	-	antisense	KNOWN	RP11-283G6.6	1	1	0.149420
chr12	26315715	26317813	26316764	ENSG00000255858.1	+	lincRNA	KNOWN	RP11-612B6.1	1	2	0.030962
chr12	26318953	26421462	26370207	ENSG00000255968.1	+	antisense	KNOWN	RP11-513G19.1	1	6	0.118097
chr12	26335864	26336950	26336407	ENSG00000256185.1	-	3prime_overlapping_ncrna	KNOWN	RP11-612B6.2	1	2	0.355026
chr12	26336515	26833198	26584856	ENSG00000123104.11	-	protein_coding	KNOWN	ITPR2	10	57	-0.008115
chr12	26373598	26373733	26373665	ENSG00000212549.1	-	rRNA	KNOWN	RNA5SP354	1	1	0.118627
chr12	26623369	26649479	26636424	ENSG00000234428.2	+	antisense	KNOWN	RP11-666F17.1	1	3	-0.066017
chr12	26800843	26801302	26801072	ENSG00000256640.1	+	processed_pseudogene	KNOWN	RP11-666F17.2	1	1	-0.047171
chr12	26905181	26938326	26921753	ENSG00000064102.14	-	protein_coding	KNOWN	ASUN	9	17	-0.095728
chr12	26938383	26966650	26952516	ENSG00000111790.13	+	protein_coding	KNOWN	FGFR1OP2	6	7	-0.123821
chr12	26971586	26979582	26975584	ENSG00000247903.1	+	antisense	KNOWN	RP11-421F16.3	1	2	0.261917
chr12	26973195	27014434	26993814	ENSG00000064115.10	-	protein_coding	KNOWN	TM7SF3	19	12	0.192880
chr12	26985934	26985985	26985959	ENSG00000280746.1	-	miRNA	NOVEL	AC024896.1	1	1	0.261917
chr12	27022546	27066343	27044444	ENSG00000152944.8	+	protein_coding	KNOWN	MED21	7	6	0.030859
chr12	27037100	27038960	27038030	ENSG00000275764.1	+	lincRNA	KNOWN	RP11-582E3.6	1	1	0.091992
chr12	27081058	27082514	27081786	ENSG00000214700.5	-	protein_coding	KNOWN	C12orf71	1	2	0.021602
chr12	27093923	27094223	27094073	ENSG00000271418.1	-	processed_pseudogene	KNOWN	RP11-582E3.5	1	1	0.197109
chr12	27105151	27161393	27133272	ENSG00000256226.1	-	lincRNA	KNOWN	RP11-582E3.2	2	2	-0.014576
chr12	27121910	27147664	27134787	ENSG00000256625.1	+	unprocessed_pseudogene	KNOWN	RP11-582E3.4	1	8	-0.079369
chr12	27243968	27325959	27284963	ENSG00000211455.7	+	protein_coding	KNOWN	STK38L	13	14	0.176432
chr12	27332854	27425289	27379071	ENSG00000029153.14	+	protein_coding	KNOWN	ARNTL2	9	17	0.059620
chr12	27389789	27446625	27418207	ENSG00000245311.2	-	antisense	KNOWN	ARNTL2-AS1	1	4	0.089630
chr12	27466810	27502185	27484497	ENSG00000165935.9	+	protein_coding	KNOWN	SMCO2	6	9	0.038839
chr12	27496937	27498589	27497763	ENSG00000257037.1	+	processed_pseudogene	KNOWN	RARSP1	1	2	0.099985
chr12	27523431	27695564	27609497	ENSG00000110841.13	+	protein_coding	KNOWN	PPFIBP1	18	30	0.242650
chr12	27547050	27552773	27549911	ENSG00000248100.2	-	lincRNA	KNOWN	RP11-709A23.1	1	2	0.206638
chr12	27592461	27594039	27593250	ENSG00000256056.1	-	unprocessed_pseudogene	KNOWN	RP11-709A23.2	1	2	0.461226
chr12	27608733	27609046	27608889	ENSG00000256557.1	-	processed_pseudogene	KNOWN	RP11-1060J15.3	1	1	0.461226
chr12	27696388	27710770	27703579	ENSG00000256377.5	-	antisense	KNOWN	RP11-1060J15.4	3	4	0.311974
chr12	27696519	27697596	27697057	ENSG00000174236.3	+	protein_coding	KNOWN	REP15	1	1	0.329571
chr12	27700066	27700574	27700320	ENSG00000276261.1	+	antisense	KNOWN	RP11-1060J15.9	1	1	0.329571
chr12	27702338	27702906	27702622	ENSG00000230519.2	+	processed_pseudogene	KNOWN	RP11-1060J15.5	1	1	0.329571
chr12	27704568	27708365	27706466	ENSG00000256504.2	+	lincRNA	KNOWN	RP11-1060J15.7	1	2	0.329571
chr12	27710773	27756295	27733534	ENSG00000061794.12	+	protein_coding	KNOWN	MRPS35	5	8	-0.031747
chr12	27752874	27752986	27752930	ENSG00000252585.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.139557
chr12	27762738	27771276	27767007	ENSG00000205693.3	-	protein_coding	KNOWN	MANSC4	1	3	0.163694
chr12	27779821	27781067	27780444	ENSG00000256747.1	-	antisense	KNOWN	RP11-860B13.1	1	2	0.300939
chr12	27780020	27803040	27791530	ENSG00000087448.9	+	protein_coding	KNOWN	KLHL42	4	4	0.156202
chr12	27798641	27800708	27799674	ENSG00000256512.1	-	antisense	KNOWN	RP11-860B13.3	1	2	0.045449
chr12	27806082	27806390	27806236	ENSG00000201612.1	-	misc_RNA	KNOWN	RN7SKP15	1	1	0.045449
chr12	27824207	27824382	27824294	ENSG00000274075.1	-	misc_RNA	NOVEL	uc_338	1	1	0.440555
chr12	27935523	27935749	27935636	ENSG00000256378.1	-	unprocessed_pseudogene	KNOWN	RP11-993B23.1	1	1	0.100355
chr12	27958084	27972705	27965394	ENSG00000087494.15	-	protein_coding	KNOWN	PTHLH	9	6	-0.255750
chr12	27958517	27969813	27964165	ENSG00000257042.1	+	antisense	KNOWN	RP11-993B23.3	1	2	-0.349198
chr12	28133249	28581511	28357380	ENSG00000123106.10	+	protein_coding	KNOWN	CCDC91	22	16	-0.241672
chr12	28163298	28190738	28177018	ENSG00000247934.4	-	antisense	KNOWN	RP11-967K21.1	2	4	-0.095767
chr12	28164958	28165662	28165310	ENSG00000255951.1	+	processed_pseudogene	KNOWN	RP11-967K21.2	1	2	-0.305768
chr12	28185625	28186190	28185907	ENSG00000278733.1	-	antisense	KNOWN	RP11-425D17.1	1	1	-0.031067
chr12	28236227	28236828	28236527	ENSG00000273989.1	+	sense_intronic	KNOWN	RP11-425D17.2	1	1	-0.488294
chr12	28319335	28319463	28319399	ENSG00000252237.1	-	snRNA	KNOWN	RNU4-54P	1	1	-0.383093
chr12	28505394	28505528	28505461	ENSG00000202187.1	+	rRNA	KNOWN	RNA5SP355	1	1	-0.607254
chr12	28564678	28565141	28564909	ENSG00000244712.1	-	processed_pseudogene	KNOWN	RP11-874G11.1	1	1	-0.407579
chr12	28821975	28825831	28823903	ENSG00000256513.1	-	lincRNA	KNOWN	RP11-977P2.1	1	2	-0.325620
chr12	28978584	28978685	28978634	ENSG00000278687.1	+	processed_pseudogene	KNOWN	RP11-31A23.1	1	1	-0.140454
chr12	29120783	29120882	29120832	ENSG00000222481.1	-	miRNA	NOVEL	AC012150.1	1	1	-0.497297
chr12	29143196	29148675	29145935	ENSG00000257258.1	-	lincRNA	KNOWN	RP11-946L16.1	1	2	-0.275984
chr12	29149103	29340980	29245041	ENSG00000064763.10	+	protein_coding	KNOWN	FAR2	10	12	-0.250993
chr12	29156448	29156991	29156719	ENSG00000275278.1	-	antisense	KNOWN	RP11-946L16.2	1	1	-0.020708
chr12	29277397	29277882	29277639	ENSG00000275476.1	-	antisense	KNOWN	RP11-996F15.4	1	1	-0.213817
chr12	29280418	29317848	29299133	ENSG00000257176.2	-	antisense	KNOWN	RP11-996F15.2	2	7	-0.304776
chr12	29331434	29331936	29331685	ENSG00000274315.1	-	antisense	KNOWN	RP11-996F15.5	1	1	-0.109215
chr12	29332733	29333383	29333058	ENSG00000273680.1	-	antisense	KNOWN	RP11-996F15.6	1	1	-0.109215
chr12	29337352	29381189	29359270	ENSG00000087502.17	-	protein_coding	KNOWN	ERGIC2	12	14	-0.268639
chr12	29389294	29487488	29438391	ENSG00000257599.1	+	antisense	KNOWN	OVCH1-AS1	3	3	-0.390468
chr12	29412474	29497686	29455080	ENSG00000187950.8	-	protein_coding	KNOWN	OVCH1	3	28	-0.439937
chr12	29500840	29784759	29642799	ENSG00000133687.15	-	protein_coding	KNOWN	TMTC1	9	20	-0.299949
chr12	29519731	29529974	29524852	ENSG00000257456.1	+	antisense	KNOWN	RP11-310I24.1	1	3	-0.457924
chr12	29658376	29658798	29658587	ENSG00000242986.2	-	processed_pseudogene	KNOWN	RP11-1110J8.1	1	1	-0.122747
chr12	30169881	30170091	30169986	ENSG00000276431.1	-	processed_pseudogene	KNOWN	RP11-776A13.4	1	1	-0.393765
chr12	30200983	30217916	30209449	ENSG00000257262.1	+	lincRNA	KNOWN	RP11-776A13.1	1	3	-0.374558
chr12	30230779	30296707	30263743	ENSG00000257756.5	-	lincRNA	KNOWN	RP11-776A13.3	3	5	-0.291576
chr12	30306431	30306524	30306477	ENSG00000251781.1	-	rRNA	KNOWN	RNA5SP356	1	1	-0.066912
chr12	30320834	30321617	30321225	ENSG00000257932.1	+	lincRNA	KNOWN	RP11-155I9.1	1	2	-0.346129
chr12	30454919	30492302	30473610	ENSG00000258202.1	+	unprocessed_pseudogene	KNOWN	RP11-776A13.2	1	3	-0.463516
chr12	30628988	30695986	30662487	ENSG00000133704.9	-	protein_coding	KNOWN	IPO8	11	25	-0.229759
chr12	30709552	30754951	30732251	ENSG00000110888.17	-	protein_coding	KNOWN	CAPRIN2	19	18	-0.177211
chr12	30755074	30780739	30767906	ENSG00000246331.2	+	lincRNA	KNOWN	RP11-77I22.2	1	2	-0.127509
chr12	30795681	30802711	30799196	ENSG00000235884.3	+	lincRNA	KNOWN	LINC00941	3	5	0.091992
chr12	30861921	30862179	30862050	ENSG00000258118.1	+	processed_pseudogene	KNOWN	RP11-77I22.4	1	1	0.123701
chr12	30926428	30996599	30961513	ENSG00000110900.14	+	protein_coding	KNOWN	TSPAN11	4	8	0.275092
chr12	30978308	31006010	30992159	ENSG00000226472.7	-	antisense	KNOWN	RP11-551L14.4	6	6	0.561700
chr12	31012503	31015667	31014085	ENSG00000256984.1	+	lincRNA	KNOWN	RP11-551L14.6	1	2	0.323317
chr12	31020763	31073847	31047305	ENSG00000245614.3	-	antisense	KNOWN	DDX11-AS1	3	3	0.127513
chr12	31073845	31104791	31089318	ENSG00000013573.16	+	protein_coding	KNOWN	DDX11	30	27	0.127462
chr12	31076867	31077016	31076941	ENSG00000212533.1	-	snoRNA	NOVEL	SNORA75	1	1	-0.029570
chr12	31105105	31106830	31105967	ENSG00000270926.1	-	unprocessed_pseudogene	KNOWN	RP11-551L14.7	1	6	0.298954
chr12	31111652	31206154	31158903	ENSG00000177359.17	-	protein_coding	KNOWN	OVOS2	5	34	-0.106342
chr12	31244440	31244685	31244562	ENSG00000270766.1	+	processed_pseudogene	KNOWN	RP11-627K11.5	1	1	0.040691
chr12	31251992	31252597	31252294	ENSG00000243517.1	-	processed_pseudogene	KNOWN	RP11-627K11.1	1	1	0.117832
chr12	31254361	31254445	31254403	ENSG00000270395.1	-	processed_pseudogene	KNOWN	MREGP1	1	1	0.117832
chr12	31280422	31280895	31280658	ENSG00000275097.1	-	3prime_overlapping_ncrna	KNOWN	RP11-627K11.6	1	1	-0.071198
chr12	31280584	31327058	31303821	ENSG00000139146.13	-	protein_coding	KNOWN	FAM60A	9	6	0.105762
chr12	31311617	31312029	31311823	ENSG00000256176.1	+	processed_pseudogene	KNOWN	RP11-627K11.3	1	2	-0.108827
chr12	31324316	31325829	31325072	ENSG00000177340.5	+	antisense	KNOWN	FLJ13224	1	1	-0.108827
chr12	31363481	31369301	31366391	ENSG00000256232.1	-	lincRNA	KNOWN	RP11-771K4.1	1	2	0.211901
chr12	31382223	31591097	31486660	ENSG00000170456.14	-	protein_coding	KNOWN	DENND5B	8	23	0.138106
chr12	31396390	31396501	31396445	ENSG00000200388.1	+	snRNA	KNOWN	RNU6-618P	1	1	0.125544
chr12	31443792	31444208	31444000	ENSG00000275769.1	-	sense_intronic	KNOWN	RP11-771K4.3	1	1	0.127616
chr12	31465062	31465842	31465452	ENSG00000203437.3	+	processed_pseudogene	KNOWN	RP11-820K3.3	1	1	0.052025
chr12	31477506	31477987	31477746	ENSG00000256159.1	+	processed_pseudogene	KNOWN	RP11-820K3.4	1	1	0.440602
chr12	31506303	31506404	31506353	ENSG00000201228.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.051578
chr12	31534715	31535247	31534981	ENSG00000225349.2	-	processed_pseudogene	KNOWN	RP11-820K3.2	1	1	-0.199348
chr12	31589923	31615666	31602794	ENSG00000255867.1	+	antisense	KNOWN	DENND5B-AS1	2	3	0.211691
chr12	31594093	31594206	31594149	ENSG00000252390.1	-	snRNA	KNOWN	RNU5F-4P	1	1	0.201616
chr12	31597114	31597409	31597261	ENSG00000231788.4	-	processed_pseudogene	KNOWN	RPL31P50	1	1	0.201616
chr12	31615771	31616439	31616105	ENSG00000233381.3	-	processed_pseudogene	KNOWN	AK4P3	1	1	0.245701
chr12	31647160	31673114	31660137	ENSG00000139160.13	+	protein_coding	KNOWN	METTL20	6	5	0.214966
chr12	31671137	31729174	31700155	ENSG00000151743.10	-	protein_coding	KNOWN	AMN1	12	10	-0.036686
chr12	31713750	31713848	31713799	ENSG00000266482.1	+	miRNA	NOVEL	AC023157.1	1	1	-0.121839
chr12	31715342	31715781	31715561	ENSG00000276058.1	-	processed_pseudogene	KNOWN	STMN1P1	1	1	-0.121839
chr12	31729117	31731204	31730160	ENSG00000276900.1	+	antisense	KNOWN	RP11-467L13.7	1	1	-0.048876
chr12	31748100	31748240	31748170	ENSG00000256843.1	-	processed_pseudogene	KNOWN	RP11-467L13.4	1	1	0.004529
chr12	31754720	31755121	31754920	ENSG00000223722.3	+	processed_pseudogene	KNOWN	RP11-467L13.5	1	1	0.008663
chr12	31791185	31792241	31791713	ENSG00000188375.4	-	protein_coding	KNOWN	H3F3C	1	1	-0.093223
chr12	31802958	31803090	31803024	ENSG00000252421.1	-	snRNA	KNOWN	RNU6-1069P	1	1	-0.093223
chr12	31811088	31811190	31811139	ENSG00000252204.1	+	snoRNA	NOVEL	SNORA25	1	1	-0.082038
chr12	31853021	31853407	31853214	ENSG00000256372.1	-	processed_pseudogene	KNOWN	RP11-428G5.4	1	1	-0.055439
chr12	31877079	31887203	31882141	ENSG00000255760.1	-	lincRNA	KNOWN	RP11-428G5.5	1	2	0.057435
chr12	31893370	31893702	31893536	ENSG00000256465.1	+	processed_pseudogene	KNOWN	RP11-428G5.6	1	1	0.109803
chr12	31897820	31898123	31897971	ENSG00000244436.2	+	processed_pseudogene	KNOWN	RP11-428G5.1	1	1	0.109803
chr12	31915636	31915707	31915671	ENSG00000252584.1	-	miRNA	NOVEL	AC023050.1	1	1	-0.161765
chr12	31948334	31948827	31948580	ENSG00000242314.1	+	processed_pseudogene	KNOWN	RPL12P32	1	1	0.018928
chr12	31953889	31955268	31954578	ENSG00000256987.1	+	processed_pseudogene	KNOWN	RP11-428G5.7	1	1	0.249232
chr12	31959370	31993107	31976238	ENSG00000174718.11	+	protein_coding	KNOWN	KIAA1551	8	6	0.347558
chr12	32000375	32001222	32000798	ENSG00000276136.1	+	lincRNA	KNOWN	RP11-50I19.2	1	1	0.008576
chr12	32007127	32007435	32007281	ENSG00000257094.1	+	processed_pseudogene	KNOWN	RP11-50I19.1	1	1	0.008576
chr12	32072734	32072880	32072807	ENSG00000257852.1	+	processed_pseudogene	KNOWN	RP11-843B15.1	1	1	0.272027
chr12	32100485	32100735	32100610	ENSG00000271357.1	-	processed_pseudogene	KNOWN	RP11-843B15.3	1	1	0.046477
chr12	32104117	32107528	32105822	ENSG00000257530.1	-	antisense	KNOWN	RP11-843B15.2	1	3	0.046477
chr12	32106835	32383633	32245234	ENSG00000151746.13	+	protein_coding	KNOWN	BICD1	10	10	0.049132
chr12	32109076	32109602	32109339	ENSG00000277342.1	+	sense_intronic	KNOWN	RP11-843B15.4	1	1	0.046477
chr12	32227410	32228154	32227782	ENSG00000258134.1	-	processed_pseudogene	KNOWN	RP11-956A19.1	1	1	0.091992
chr12	32339368	32340724	32340046	ENSG00000274964.1	+	sense_intronic	KNOWN	RP11-817I4.1	1	1	0.328432
chr12	32352349	32354144	32353246	ENSG00000276115.1	+	sense_intronic	KNOWN	RP11-817I4.2	1	1	-0.167652
chr12	32396050	32396147	32396098	ENSG00000207176.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.264053
chr12	32399529	32646050	32522789	ENSG00000139132.14	+	protein_coding	KNOWN	FGD4	16	19	0.030835
chr12	32477382	32477471	32477426	ENSG00000253063.1	-	snRNA	KNOWN	RNU6-494P	1	1	-0.120669
chr12	32679200	32745650	32712425	ENSG00000087470.17	+	protein_coding	KNOWN	DNM1L	30	21	0.001208
chr12	32692504	32692848	32692676	ENSG00000257643.1	-	processed_pseudogene	KNOWN	RP11-278C7.2	1	1	0.047598
chr12	32705403	32705506	32705454	ENSG00000201563.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.047598
chr12	32725248	32725660	32725454	ENSG00000276148.1	-	antisense	KNOWN	RP11-278C7.4	1	1	-0.184069
chr12	32726383	32727387	32726885	ENSG00000257511.1	-	processed_pseudogene	KNOWN	RP11-278C7.1	1	1	-0.184069
chr12	32727490	32755902	32741696	ENSG00000139131.12	-	protein_coding	KNOWN	YARS2	3	5	-0.124976
chr12	32728169	32729024	32728596	ENSG00000274105.1	-	sense_intronic	KNOWN	RP11-278C7.3	1	1	-0.184069
chr12	32736930	32737660	32737295	ENSG00000275854.1	-	sense_intronic	KNOWN	RP11-278C7.5	1	1	-0.194312
chr12	32790745	32896840	32843792	ENSG00000057294.13	-	protein_coding	KNOWN	PKP2	8	15	-0.264489
chr12	32820142	32820567	32820354	ENSG00000274976.1	-	sense_intronic	KNOWN	RP11-8P13.5	1	1	-0.287245
chr12	32863118	32863433	32863275	ENSG00000244743.1	+	processed_pseudogene	KNOWN	RP11-8P13.1	1	1	-0.492971
chr12	32985838	32987070	32986454	ENSG00000257316.1	+	processed_pseudogene	KNOWN	RP11-267D19.2	1	1	-0.206232
chr12	32988763	32993754	32991258	ENSG00000257435.1	+	lincRNA	KNOWN	RP11-267D19.1	1	2	-0.327518
chr12	33041725	33041821	33041773	ENSG00000238911.1	-	miRNA	NOVEL	AC026357.1	1	1	-0.004516
chr12	33374238	33439819	33407028	ENSG00000110975.8	-	protein_coding	KNOWN	SYT10	3	9	-0.454392
chr12	33404872	33405896	33405384	ENSG00000259937.2	-	sense_intronic	KNOWN	RP11-438D14.2	1	1	-0.647548
chr12	33412530	33412611	33412570	ENSG00000281105.1	-	miRNA	NOVEL	AC023158.1	1	1	-0.139738
chr12	33432311	33432853	33432582	ENSG00000273853.1	-	sense_intronic	KNOWN	RP11-438D14.3	1	1	-0.557511
chr12	33454345	33455452	33454898	ENSG00000256070.1	+	processed_pseudogene	KNOWN	RP11-56H16.1	1	1	-0.560085
chr12	33576095	33576200	33576147	ENSG00000212475.1	+	snRNA	KNOWN	RNU6-400P	1	1	-0.669397
chr12	33717853	33718217	33718035	ENSG00000270807.1	+	processed_pseudogene	KNOWN	RP13-359K18.1	1	1	-0.700413
chr12	33923374	33923480	33923427	ENSG00000207026.1	-	snRNA	KNOWN	RNU6-472P	1	1	-0.262190
chr12	33982465	33982566	33982515	ENSG00000201624.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.815979
chr12	34022281	34046417	34034349	ENSG00000245482.2	-	antisense	KNOWN	RP11-847H18.2	1	2	-0.120415
chr12	34022281	34029694	34025987	ENSG00000139133.6	+	protein_coding	KNOWN	ALG10	4	3	0.030591
chr12	34027268	34027362	34027315	ENSG00000264446.1	-	miRNA	NOVEL	AC046130.1	1	1	0.030591
chr12	34037438	34056740	34047089	ENSG00000256538.1	+	lincRNA	KNOWN	RP11-847H18.3	1	3	-0.226434
chr12	34149839	34162238	34156038	ENSG00000255628.1	+	lincRNA	KNOWN	RP11-313F23.3	1	3	-0.505497
chr12	34162477	34163442	34162959	ENSG00000256986.2	+	unprocessed_pseudogene	KNOWN	FAM166AP2	1	4	-0.509459
chr12	34164773	34166954	34165863	ENSG00000250788.1	-	unprocessed_pseudogene	KNOWN	TUBB8P4	1	4	-0.509459
chr12	34191279	34218853	34205066	ENSG00000255652.3	-	lincRNA	KNOWN	RP11-313F23.4	1	4	-0.257744
chr12	34205699	34205817	34205758	ENSG00000272435.1	+	rRNA	KNOWN	RNA5SP357	1	1	-0.510673
chr12	34208415	34209675	34209045	ENSG00000258794.3	-	processed_pseudogene	KNOWN	DUX4L27	1	1	-0.510673
chr12	34249481	34249958	34249719	ENSG00000256614.1	+	processed_pseudogene	KNOWN	AK6P1	1	1	0.074504
chr12	37575587	37576384	37575985	ENSG00000258368.2	+	unprocessed_pseudogene	KNOWN	ZNF970P	1	2	-0.153765
chr12	38078529	38078999	38078764	ENSG00000257173.1	-	processed_pseudogene	KNOWN	AK6P2	1	1	-0.382788
chr12	38082046	38087392	38084719	ENSG00000258278.2	+	unprocessed_pseudogene	KNOWN	CLUHP8	1	10	-0.382788
chr12	38150050	38150138	38150094	ENSG00000274293.1	+	misc_RNA	NOVEL	pRNA	1	1	0.128151
chr12	38161466	38161582	38161524	ENSG00000199843.1	-	rRNA	KNOWN	RNA5SP358	1	1	0.128151
chr12	38163403	38163515	38163459	ENSG00000201708.1	-	rRNA	KNOWN	RNA5SP359	1	1	0.128151
chr12	38201566	38203792	38202679	ENSG00000254381.3	+	unprocessed_pseudogene	KNOWN	TUBB8P5	1	4	-0.220221
chr12	38205098	38206009	38205553	ENSG00000257292.2	-	unprocessed_pseudogene	KNOWN	FAM166AP9	1	4	-0.220221
chr12	38206231	38207192	38206711	ENSG00000258360.1	-	unprocessed_pseudogene	KNOWN	NF1P12	1	2	-0.220221
chr12	38274448	38274549	38274498	ENSG00000253016.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.398755
chr12	38316578	38329728	38323153	ENSG00000175548.8	+	protein_coding	KNOWN	ALG10B	4	3	-0.642275
chr12	38321566	38321660	38321613	ENSG00000266333.1	-	miRNA	NOVEL	AC117372.1	1	1	-0.642275
chr12	38520233	38520301	38520267	ENSG00000281888.1	+	miRNA	NOVEL	AC087897.1	1	1	-0.367440
chr12	38532895	38533050	38532972	ENSG00000257645.1	-	processed_pseudogene	KNOWN	RP11-804F13.2	1	1	-0.686881
chr12	38544177	38589812	38566994	ENSG00000258119.1	-	lincRNA	KNOWN	RP11-804F13.1	2	4	-0.444412
chr12	38646822	38907430	38777126	ENSG00000139117.13	-	protein_coding	KNOWN	CPNE8	9	20	-0.469713
chr12	38906451	38909592	38908021	ENSG00000257718.1	+	antisense	KNOWN	RP11-396F22.1	1	2	-0.598680
chr12	38913240	38913326	38913283	ENSG00000252801.2	-	miRNA	NOVEL	AC067735.1	1	1	-0.153419
chr12	38994803	38996882	38995842	ENSG00000257586.1	-	unprocessed_pseudogene	KNOWN	RP11-554L12.3	1	2	-0.531075
chr12	39058028	39059933	39058980	ENSG00000257237.1	-	unprocessed_pseudogene	KNOWN	RP11-554L12.2	1	3	-0.439390
chr12	39087713	39092874	39090293	ENSG00000258144.1	-	lincRNA	KNOWN	RP11-554L12.1	1	3	-0.795247
chr12	39170646	39170880	39170763	ENSG00000270718.1	+	processed_pseudogene	KNOWN	RP11-421H10.2	1	1	-0.526918
chr12	39293228	39443390	39368309	ENSG00000139116.17	-	protein_coding	KNOWN	KIF21A	13	38	-0.426462
chr12	39443048	39443116	39443082	ENSG00000252974.1	-	miRNA	NOVEL	AC121334.1	1	1	-0.282074
chr12	39466442	39467345	39466893	ENSG00000255991.2	-	processed_pseudogene	KNOWN	RP11-242C24.2	1	2	-0.153121
chr12	39539581	39539851	39539716	ENSG00000270273.1	-	processed_pseudogene	KNOWN	RP11-242C24.3	1	1	-0.208132
chr12	39550033	39619751	39584892	ENSG00000173208.3	-	protein_coding	KNOWN	ABCD2	1	10	-0.244284
chr12	39626167	39908300	39767233	ENSG00000180116.15	+	protein_coding	KNOWN	C12orf40	3	19	-0.381849
chr12	39755021	40106089	39930555	ENSG00000151229.12	-	protein_coding	KNOWN	SLC2A13	4	10	-0.312497
chr12	39807095	39807174	39807134	ENSG00000223082.1	-	miRNA	NOVEL	AC121336.1	1	1	-0.110995
chr12	39819750	39819883	39819816	ENSG00000199571.1	-	snoRNA	NOVEL	SNORA22	1	1	-0.397046
chr12	40068243	40068590	40068416	ENSG00000229014.3	-	processed_pseudogene	KNOWN	RPL30P13	1	1	-0.497075
chr12	40140926	40142876	40141901	ENSG00000260943.1	-	lincRNA	KNOWN	RP11-476D10.1	1	1	-0.381462
chr12	40156239	40167707	40161973	ENSG00000223914.1	+	lincRNA	KNOWN	AC079630.2	2	2	-0.574452
chr12	40186009	40224915	40205462	ENSG00000225342.2	-	antisense	KNOWN	AC079630.4	2	4	-0.581290
chr12	40196744	40369285	40283014	ENSG00000188906.13	+	protein_coding	KNOWN	LRRK2	7	51	-0.411556
chr12	40286289	40286662	40286475	ENSG00000229899.1	+	processed_pseudogene	KNOWN	AC084290.2	1	1	-0.753034
chr12	40393395	40570832	40482113	ENSG00000205592.13	+	processed_transcript	KNOWN	MUC19	12	172	-0.355217
chr12	40395853	40443847	40419850	ENSG00000258167.1	-	antisense	KNOWN	RP11-115F18.1	1	4	-0.284671
chr12	40554161	40554267	40554214	ENSG00000207492.1	-	snRNA	KNOWN	RNU6-713P	1	1	-0.449309
chr12	40692442	41072418	40882430	ENSG00000018236.14	+	protein_coding	KNOWN	CNTN1	11	24	-0.435618
chr12	40728811	40729897	40729354	ENSG00000257680.1	+	processed_pseudogene	KNOWN	RP11-367O10.1	1	1	-0.376778
chr12	40978744	40979244	40978994	ENSG00000274682.1	+	sense_intronic	KNOWN	RP11-385G16.1	1	1	-0.337516
chr12	41188448	41574590	41381519	ENSG00000165966.14	+	protein_coding	KNOWN	PDZRN4	4	10	-0.433268
chr12	41409467	41473510	41441488	ENSG00000257228.5	-	antisense	KNOWN	RP11-413B19.2	2	5	-0.388468
chr12	41658676	41658793	41658734	ENSG00000252364.1	+	rRNA	KNOWN	RNA5SP360	1	1	-0.236430
chr12	41698495	41699182	41698838	ENSG00000258239.1	-	unprocessed_pseudogene	KNOWN	MTND2P17	1	1	-0.259772
chr12	41699391	41700251	41699821	ENSG00000257858.1	-	unprocessed_pseudogene	KNOWN	MTND1P24	1	1	-0.259772
chr12	41764189	41765581	41764885	ENSG00000257784.1	+	lincRNA	KNOWN	RP11-630C16.1	2	3	-0.440356
chr12	41829898	41932592	41881245	ENSG00000257239.1	-	lincRNA	KNOWN	RP11-630C16.2	1	2	-0.296293
chr12	41911256	41912212	41911734	ENSG00000257128.1	+	processed_pseudogene	KNOWN	RP11-2A1.1	1	2	-0.295669
chr12	42069935	42070625	42070280	ENSG00000271379.1	-	processed_pseudogene	KNOWN	RP11-440G2.2	1	1	-0.040003
chr12	42079761	42079882	42079821	ENSG00000222884.1	+	miRNA	NOVEL	AC023513.1	1	1	-0.001118
chr12	42081845	42144879	42113362	ENSG00000151233.10	-	protein_coding	KNOWN	GXYLT1	2	8	-0.169095
chr12	42157104	42238349	42197726	ENSG00000015153.14	-	protein_coding	KNOWN	YAF2	19	7	-0.028468
chr12	42238447	42459715	42349081	ENSG00000134283.17	+	protein_coding	KNOWN	PPHLN1	26	14	0.051008
chr12	42286911	42288560	42287735	ENSG00000257674.1	+	processed_pseudogene	KNOWN	RP11-76E16.2	1	1	0.204258
chr12	42312078	42326118	42319098	ENSG00000139168.7	-	protein_coding	KNOWN	ZCRB1	5	8	0.119299
chr12	42323700	42323859	42323779	ENSG00000278520.1	-	miRNA	KNOWN	MIR7851	1	1	0.119299
chr12	42347061	42347214	42347137	ENSG00000252917.1	-	snoRNA	NOVEL	SNORA74	1	1	-0.071833
chr12	42361267	42361703	42361485	ENSG00000274943.1	+	sense_intronic	KNOWN	RP11-351C21.2	1	1	0.192792
chr12	42398550	42398651	42398600	ENSG00000199886.1	+	snRNA	KNOWN	RNU6-249P	1	1	0.054024
chr12	42431665	42433357	42432511	ENSG00000257376.1	-	processed_pseudogene	KNOWN	RP11-328C8.2	1	3	0.217523
chr12	42454720	42454821	42454770	ENSG00000207142.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.100029
chr12	42456754	42590355	42523554	ENSG00000139174.10	-	protein_coding	KNOWN	PRICKLE1	9	8	0.119156
chr12	42459366	42466128	42462747	ENSG00000257225.1	+	antisense	KNOWN	RP11-328C8.4	1	2	0.100029
chr12	42485353	42490019	42487686	ENSG00000258068.1	-	sense_intronic	KNOWN	RP11-328C8.5	1	2	0.092801
chr12	42615503	42646498	42631000	ENSG00000257510.1	-	lincRNA	KNOWN	RP11-609L23.1	1	6	-0.005552
chr12	42627008	42627137	42627072	ENSG00000257687.1	-	processed_pseudogene	KNOWN	RP11-609L23.3	1	1	0.167719
chr12	42636815	42637111	42636963	ENSG00000257405.1	-	processed_pseudogene	KNOWN	RP11-609L23.2	1	1	-0.157787
chr12	42646583	42686701	42666642	ENSG00000257164.5	+	lincRNA	KNOWN	RP11-25I15.2	2	5	-0.066083
chr12	42678873	42679124	42678998	ENSG00000240759.1	-	processed_pseudogene	KNOWN	RP11-25I15.1	1	1	-0.076209
chr12	42692216	42717119	42704667	ENSG00000257114.2	+	lincRNA	KNOWN	RP11-25I15.3	1	4	-0.025763
chr12	42929848	42930579	42930213	ENSG00000271272.1	-	processed_pseudogene	KNOWN	RP11-510P12.1	1	1	-0.065766
chr12	42966122	42967353	42966737	ENSG00000257849.1	+	lincRNA	KNOWN	RP11-547C5.1	1	2	-0.086546
chr12	42979254	42996486	42987870	ENSG00000257373.1	-	lincRNA	KNOWN	RP11-547C5.2	1	3	0.007106
chr12	43054089	43054386	43054237	ENSG00000257927.1	-	processed_pseudogene	KNOWN	MRPS36P5	1	1	-0.376852
chr12	43155315	43163110	43159212	ENSG00000258331.1	+	lincRNA	KNOWN	RP11-118A3.1	1	4	-0.053686
chr12	43291495	43291580	43291537	ENSG00000215993.1	-	miRNA	NOVEL	AC079603.1	1	1	0.117832
chr12	43318999	43319078	43319038	ENSG00000264437.2	-	miRNA	NOVEL	AC107018.1	1	1	0.033777
chr12	43353866	43551921	43452893	ENSG00000173157.16	-	protein_coding	KNOWN	ADAMTS20	4	39	-0.390300
chr12	43416635	43416686	43416660	ENSG00000265012.2	-	miRNA	NOVEL	AC120104.1	1	1	-0.520451
chr12	43560784	43561297	43561040	ENSG00000241251.2	-	processed_pseudogene	KNOWN	RP11-73B8.1	1	2	-0.513036
chr12	43569769	43572038	43570903	ENSG00000257813.2	-	processed_pseudogene	KNOWN	RP11-73B8.2	1	1	-0.453844
chr12	43633093	43633281	43633187	ENSG00000271508.1	+	processed_pseudogene	KNOWN	RP11-73B8.3	1	1	-0.474708
chr12	43659827	43661101	43660464	ENSG00000257907.2	+	processed_pseudogene	KNOWN	EEF1A1P17	1	1	-0.675835
chr12	43718993	43758817	43738905	ENSG00000129317.14	-	protein_coding	KNOWN	PUS7L	8	9	-0.198606
chr12	43736628	43741067	43738847	ENSG00000257896.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-210N13.1	3	4	-0.159070
chr12	43758944	43789543	43774243	ENSG00000198001.13	+	protein_coding	KNOWN	IRAK4	14	14	-0.362895
chr12	43793723	43806375	43800049	ENSG00000151239.13	-	protein_coding	KNOWN	TWF1	11	10	-0.223104
chr12	43835967	44389762	44112864	ENSG00000139173.9	+	protein_coding	KNOWN	TMEM117	8	8	-0.176600
chr12	43983468	43983547	43983507	ENSG00000265029.2	-	miRNA	NOVEL	AC076972.1	1	1	-0.126188
chr12	44008620	44010143	44009381	ENSG00000258212.1	-	processed_pseudogene	KNOWN	ZNF75BP	1	1	-0.178873
chr12	44244394	44263982	44254188	ENSG00000257947.1	-	antisense	KNOWN	RP11-46I1.1	1	2	-0.269841
chr12	44248432	44249004	44248718	ENSG00000257864.1	-	processed_pseudogene	KNOWN	RP11-46I1.2	1	1	-0.162192
chr12	44498616	44499158	44498887	ENSG00000275286.1	-	lincRNA	KNOWN	RP11-499A10.3	1	1	-0.492971
chr12	44508275	44921848	44715061	ENSG00000184613.10	-	protein_coding	KNOWN	NELL2	20	22	-0.433849
chr12	44880868	44880969	44880918	ENSG00000201788.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.208241
chr12	45014672	45051099	45032885	ENSG00000185610.6	-	protein_coding	KNOWN	DBX2	1	4	-0.478352
chr12	45050901	45103107	45077004	ENSG00000257319.1	+	antisense	KNOWN	RP11-478B9.1	1	2	-0.273738
chr12	45063473	45065351	45064412	ENSG00000257331.1	-	processed_pseudogene	KNOWN	RP11-478B9.3	1	1	-0.380077
chr12	45071769	45072843	45072306	ENSG00000257572.1	+	processed_pseudogene	KNOWN	RP11-478B9.2	1	1	-0.161127
chr12	45117771	45117888	45117829	ENSG00000199556.1	+	rRNA	KNOWN	RNA5SP361	1	1	-0.513036
chr12	45173064	45216041	45194552	ENSG00000134297.6	-	transcribed_processed_pseudogene	KNOWN	PLEKHA8P1	4	3	0.081842
chr12	45200817	45201551	45201184	ENSG00000257738.2	+	processed_pseudogene	KNOWN	RP11-139E19.2	1	1	0.066152
chr12	45215987	45440404	45328195	ENSG00000177119.15	+	protein_coding	KNOWN	ANO6	7	21	0.079587
chr12	45256473	45256726	45256599	ENSG00000278351.1	+	sense_intronic	KNOWN	RP11-139E19.3	1	1	-0.130401
chr12	45444766	45445438	45445102	ENSG00000257368.2	+	processed_pseudogene	KNOWN	RP11-438E8.2	1	1	0.142618
chr12	45481871	45610620	45546245	ENSG00000257657.2	-	lincRNA	KNOWN	RP11-352M15.1	2	5	-0.244203
chr12	45718046	45727775	45722910	ENSG00000273015.2	-	lincRNA	KNOWN	RP11-352M15.2	1	1	-0.189421
chr12	45729665	45908040	45818852	ENSG00000189079.15	+	protein_coding	KNOWN	ARID2	9	21	-0.013415
chr12	45789189	45789657	45789423	ENSG00000278475.1	+	sense_intronic	KNOWN	RP11-19E18.2	1	1	-0.090662
chr12	45874035	45874330	45874182	ENSG00000265093.2	+	misc_RNA	KNOWN	RN7SL246P	1	1	0.246714
chr12	45880950	45882266	45881608	ENSG00000270429.1	-	processed_pseudogene	KNOWN	KNOP1P2	1	1	0.246714
chr12	45919131	45992120	45955625	ENSG00000139218.17	-	protein_coding	KNOWN	SCAF11	15	15	0.137804
chr12	46004038	46004685	46004361	ENSG00000239397.1	-	processed_pseudogene	KNOWN	RP11-101K23.1	1	1	0.376088
chr12	46183063	46270017	46226540	ENSG00000111371.15	-	protein_coding	KNOWN	SLC38A1	11	18	0.324902
chr12	46239106	46239473	46239289	ENSG00000274591.1	-	sense_intronic	KNOWN	RP11-474P2.5	1	1	0.399420
chr12	46358189	46372867	46365528	ENSG00000134294.13	-	protein_coding	KNOWN	SLC38A2	14	16	0.477471
chr12	46371463	46373778	46372620	ENSG00000258096.1	+	antisense	KNOWN	RP11-474P2.2	1	2	0.676954
chr12	46383679	46876159	46629919	ENSG00000257261.5	+	lincRNA	KNOWN	RP11-96H19.1	3	4	0.309798
chr12	46384233	46386991	46385612	ENSG00000257496.1	-	lincRNA	KNOWN	RP11-474P2.4	1	2	0.676954
chr12	46388856	46392126	46390491	ENSG00000275481.1	+	lincRNA	KNOWN	RP11-474P2.6	1	1	0.529170
chr12	46404644	46407166	46405905	ENSG00000278896.1	+	TEC	KNOWN	RP11-474P2.7	1	1	0.449754
chr12	46537502	46652550	46595026	ENSG00000272369.1	+	lincRNA	KNOWN	RP11-446N19.1	1	3	0.340519
chr12	46592573	46593305	46592939	ENSG00000272963.1	+	unprocessed_pseudogene	KNOWN	OR7A19P	1	1	0.174885
chr12	46682071	46682713	46682392	ENSG00000271642.1	-	processed_pseudogene	KNOWN	MARK3P1	1	1	0.664728
chr12	46764761	46832408	46798584	ENSG00000139209.15	-	protein_coding	KNOWN	SLC38A4	5	17	-0.066202
chr12	46970504	46972155	46971329	ENSG00000274723.1	+	lincRNA	KNOWN	RP11-618L22.1	1	2	0.695813
chr12	47075707	47079951	47077829	ENSG00000139211.6	-	protein_coding	KNOWN	AMIGO2	3	3	0.720023
chr12	47079603	47236662	47158132	ENSG00000179715.12	+	protein_coding	KNOWN	PCED1B	6	4	0.410108
chr12	47135498	47138370	47136934	ENSG00000258352.1	-	transcribed_processed_pseudogene	KNOWN	RP11-23J18.1	2	2	0.243110
chr12	47187812	47187891	47187851	ENSG00000263838.1	+	miRNA	KNOWN	MIR4698	1	1	0.430975
chr12	47205898	47216456	47211177	ENSG00000247774.6	-	processed_transcript	KNOWN	PCED1B-AS1	11	5	0.533825
chr12	47237734	47279021	47258377	ENSG00000257925.1	-	antisense	KNOWN	RP11-493L12.3	1	2	0.584322
chr12	47248124	47257539	47252831	ENSG00000258181.1	+	lincRNA	KNOWN	RP11-493L12.4	2	3	0.599502
chr12	47265665	47266108	47265886	ENSG00000276454.1	+	lincRNA	KNOWN	RP11-493L12.7	1	1	0.587519
chr12	47341614	47342089	47341851	ENSG00000258116.1	-	processed_pseudogene	KNOWN	RP11-493L12.6	1	1	0.254930
chr12	47346166	47346297	47346231	ENSG00000199566.1	-	snoRNA	NOVEL	SNORA64	1	1	0.254930
chr12	47353754	47369935	47361844	ENSG00000257924.1	+	lincRNA	KNOWN	RP11-493L12.5	1	3	0.156122
chr12	47364186	47364269	47364227	ENSG00000264906.1	-	miRNA	KNOWN	MIR4494	1	1	0.156122
chr12	47415008	47420179	47417593	ENSG00000257906.1	+	lincRNA	KNOWN	RP1-90J4.1	1	2	0.206928
chr12	47463087	47463621	47463354	ENSG00000258369.1	+	processed_pseudogene	KNOWN	RP1-90J4.2	1	2	0.216082
chr12	47484689	47485722	47485205	ENSG00000257807.1	+	processed_pseudogene	KNOWN	RP1-90J4.3	1	1	0.353577
chr12	47593208	47593440	47593324	ENSG00000257905.1	+	processed_pseudogene	KNOWN	RP3-432I18.1	1	1	0.284637
chr12	47661249	47706061	47683655	ENSG00000005175.9	-	protein_coding	KNOWN	RPAP3	7	17	0.096507
chr12	47699401	47699917	47699659	ENSG00000276390.1	-	sense_intronic	KNOWN	RP1-197B17.5	1	1	-0.101780
chr12	47706085	47742294	47724189	ENSG00000257433.5	+	antisense	KNOWN	RP1-197B17.3	5	6	0.754600
chr12	47709734	47725567	47717650	ENSG00000111405.8	-	protein_coding	KNOWN	ENDOU	4	10	0.758360
chr12	47728151	47730598	47729374	ENSG00000280054.1	-	TEC	KNOWN	RP1-197B17.7	1	1	0.827904
chr12	47731908	47732351	47732129	ENSG00000274902.1	+	lincRNA	KNOWN	RP1-197B17.4	1	1	0.997287
chr12	47734367	47771040	47752703	ENSG00000079337.15	-	protein_coding	KNOWN	RAPGEF3	20	29	1.007699
chr12	47753916	47782753	47768334	ENSG00000211584.13	+	protein_coding	KNOWN	SLC48A1	9	5	1.013795
chr12	47768529	47769648	47769088	ENSG00000277173.1	+	sense_intronic	KNOWN	CTD-2024F21.1	1	1	1.015641
chr12	47782722	47833132	47807927	ENSG00000061273.17	-	protein_coding	KNOWN	HDAC7	30	27	1.146801
chr12	47784923	47786002	47785462	ENSG00000268069.2	+	antisense	KNOWN	RP5-1057I20.4	1	1	1.011468
chr12	47788426	47788971	47788698	ENSG00000276691.1	+	antisense	KNOWN	RP5-1057I20.5	1	1	1.011468
chr12	47817451	47817966	47817708	ENSG00000274737.1	-	sense_intronic	KNOWN	RP5-1057I20.6	1	1	1.049386
chr12	47826854	47837898	47832376	ENSG00000257488.5	+	lincRNA	KNOWN	RP5-1057I20.2	5	3	1.143518
chr12	47841537	47943048	47892292	ENSG00000111424.10	-	protein_coding	KNOWN	VDR	8	11	0.747976
chr12	47882649	47901525	47892087	ENSG00000205537.2	+	antisense	KNOWN	RP11-89H19.1	1	4	0.739564
chr12	47905122	47906865	47905993	ENSG00000278385.1	+	lincRNA	KNOWN	RP11-89H19.2	1	1	0.662879
chr12	47960497	47963469	47961983	ENSG00000279840.1	-	TEC	KNOWN	RP1-228P16.9	1	1	0.806835
chr12	47963569	47968878	47966223	ENSG00000134291.11	+	protein_coding	KNOWN	TMEM106C	22	8	0.806835
chr12	47972965	48004486	47988725	ENSG00000139219.17	-	protein_coding	KNOWN	COL2A1	9	54	0.792383
chr12	48005277	48011227	48008252	ENSG00000258203.5	-	lincRNA	KNOWN	RP1-228P16.3	2	5	0.728204
chr12	48011304	48025469	48018386	ENSG00000257985.1	+	antisense	KNOWN	RP1-228P16.4	1	4	0.713912
chr12	48019771	48025382	48022576	ENSG00000257955.1	-	lincRNA	KNOWN	RP1-228P16.5	1	2	0.713912
chr12	48039784	48040761	48040272	ENSG00000276814.1	-	lincRNA	KNOWN	RP1-228P16.8	1	1	0.721277
chr12	48042898	48106308	48074603	ENSG00000079387.13	-	protein_coding	KNOWN	SENP1	10	19	0.413164
chr12	48054813	48055591	48055202	ENSG00000240399.1	-	transcribed_processed_pseudogene	KNOWN	RP1-228P16.1	2	1	0.500077
chr12	48081319	48081428	48081373	ENSG00000222635.1	+	snRNA	KNOWN	RNU6-1203P	1	1	0.339475
chr12	48085062	48085421	48085241	ENSG00000226138.4	+	processed_pseudogene	KNOWN	RP1-228P16.7	1	1	0.339475
chr12	48105139	48146404	48125771	ENSG00000152556.15	+	protein_coding	KNOWN	PFKM	32	26	0.415726
chr12	48132797	48132867	48132832	ENSG00000275770.1	+	miRNA	KNOWN	MIR6505	1	1	0.388041
chr12	48147788	48181213	48164500	ENSG00000177981.10	-	protein_coding	KNOWN	ASB8	18	5	0.367708
chr12	48152817	48153128	48152972	ENSG00000274124.1	+	antisense	KNOWN	RP11-474C8.8	1	1	0.425286
chr12	48160245	48160878	48160561	ENSG00000258051.1	-	processed_pseudogene	KNOWN	RP11-474C8.3	1	1	0.425286
chr12	48168847	48169659	48169253	ENSG00000257885.1	-	processed_pseudogene	KNOWN	PHBP18	1	1	0.425286
chr12	48171590	48173353	48172471	ENSG00000257848.1	+	processed_pseudogene	KNOWN	RP11-474C8.5	1	3	0.261011
chr12	48183584	48185926	48184755	ENSG00000177875.4	+	protein_coding	KNOWN	CCDC184	1	1	0.261011
chr12	48189349	48191207	48190278	ENSG00000279875.1	+	TEC	KNOWN	RP11-474C8.7	1	1	0.279003
chr12	48198387	48202031	48200209	ENSG00000269514.1	+	lincRNA	KNOWN	RP11-370I10.12	1	1	0.288684
chr12	48202083	48203387	48202735	ENSG00000172640.3	-	protein_coding	KNOWN	OR10AD1	1	1	0.288684
chr12	48231098	48284210	48257654	ENSG00000258234.1	-	lincRNA	KNOWN	RP11-370I10.2	1	4	-0.319705
chr12	48327942	48328472	48328207	ENSG00000275228.1	-	lincRNA	KNOWN	RP11-370I10.10	1	1	0.276024
chr12	48328980	48330279	48329629	ENSG00000187166.1	+	protein_coding	KNOWN	H1FNT	1	1	0.297783
chr12	48333755	48333901	48333828	ENSG00000258273.1	-	unprocessed_pseudogene	KNOWN	RP11-370I10.4	1	1	0.376969
chr12	48337180	48351414	48344297	ENSG00000167528.12	-	protein_coding	KNOWN	ZNF641	10	7	0.365796
chr12	48350945	48442411	48396678	ENSG00000257735.1	+	antisense	KNOWN	RP11-370I10.6	1	4	0.021444
chr12	48355792	48356614	48356203	ENSG00000257763.1	-	unprocessed_pseudogene	KNOWN	OR5BK1P	1	1	0.264571
chr12	48360920	48361377	48361148	ENSG00000273765.1	+	lincRNA	KNOWN	RP11-370I10.11	1	1	0.264571
chr12	48385417	48386265	48385841	ENSG00000258024.1	-	unprocessed_pseudogene	KNOWN	OR5BT1P	1	1	0.015371
chr12	48394510	48395392	48394951	ENSG00000257792.1	-	unprocessed_pseudogene	KNOWN	OR5BJ1P	1	1	0.154533
chr12	48417150	48417337	48417243	ENSG00000273434.1	-	unprocessed_pseudogene	KNOWN	OR8S21P	1	1	-0.007544
chr12	48442030	48442947	48442488	ENSG00000226413.2	-	unprocessed_pseudogene	KNOWN	OR8T1P	1	1	-0.509746
chr12	48472665	48473624	48473144	ENSG00000139223.2	+	protein_coding	KNOWN	ANP32D	1	1	-0.090600
chr12	48482503	48496512	48489507	ENSG00000177627.9	+	protein_coding	KNOWN	C12orf54	6	9	0.122436
chr12	48483287	48500961	48492124	ENSG00000258121.1	-	antisense	KNOWN	RP11-722P11.4	1	3	0.193607
chr12	48487946	48488408	48488177	ENSG00000240443.1	+	transcribed_processed_pseudogene	KNOWN	RPS10P20	1	1	-0.090600
chr12	48507354	48529897	48518625	ENSG00000197376.2	+	protein_coding	KNOWN	OR8S1	2	2	-0.101190
chr12	48559882	48562956	48561419	ENSG00000198678.5	+	unprocessed_pseudogene	KNOWN	OR5BS1P	1	2	-0.050613
chr12	48567684	48570066	48568875	ENSG00000167531.6	-	protein_coding	KNOWN	LALBA	2	4	-0.049547
chr12	48627888	48628782	48628335	ENSG00000224709.1	+	unitary_pseudogene	KNOWN	OR11M1P	1	1	0.028216
chr12	48653401	48682238	48667819	ENSG00000139620.12	-	protein_coding	KNOWN	KANSL2	15	10	0.562598
chr12	48654382	48654518	48654450	ENSG00000221491.2	-	snoRNA	KNOWN	SNORA34	1	1	0.703067
chr12	48654426	48654537	48654481	ENSG00000281842.1	-	miRNA	NOVEL	AC079951.1	1	1	0.703067
chr12	48656648	48656782	48656715	ENSG00000206612.1	-	snoRNA	KNOWN	SNORA2A	1	1	0.703067
chr12	48667457	48667593	48667525	ENSG00000207313.1	-	snoRNA	KNOWN	SNORA2B	1	1	0.703067
chr12	48688458	48716998	48702728	ENSG00000129315.9	-	protein_coding	KNOWN	CCNT1	5	9	0.546404
chr12	48727435	48765786	48746610	ENSG00000257987.5	+	lincRNA	KNOWN	LINC00935	2	5	0.516139
chr12	48766194	48789037	48777615	ENSG00000174233.11	-	protein_coding	KNOWN	ADCY6	9	21	1.096197
chr12	48766194	48767323	48766758	ENSG00000257653.1	+	antisense	KNOWN	RP11-579D7.2	1	2	0.673964
chr12	48771975	48772037	48772006	ENSG00000264201.1	-	miRNA	KNOWN	MIR4701	1	1	1.180586
chr12	48789147	48790535	48789841	ENSG00000257660.5	+	lincRNA	KNOWN	RP11-579D7.4	2	3	1.139091
chr12	48800576	48801086	48800831	ENSG00000271547.1	-	processed_pseudogene	KNOWN	RP11-579D7.8	1	1	1.073133
chr12	48809911	48810016	48809963	ENSG00000207467.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.050854
chr12	48813794	48828941	48821367	ENSG00000167535.7	+	protein_coding	KNOWN	CACNB3	24	14	0.935529
chr12	48829764	48852842	48841303	ENSG00000174243.9	-	protein_coding	KNOWN	DDX23	18	17	0.911063
chr12	48857145	48865898	48861521	ENSG00000172602.9	-	protein_coding	KNOWN	RND1	5	5	0.892222
chr12	48892130	48892228	48892179	ENSG00000199394.1	-	snRNA	KNOWN	RNU6-600P	1	1	0.845930
chr12	48903418	48903813	48903615	ENSG00000239617.1	-	processed_pseudogene	KNOWN	RP11-302B13.1	1	1	0.845930
chr12	48903503	48957365	48930434	ENSG00000272822.1	-	protein_coding	KNOWN	RP11-302B13.5	1	5	0.897979
chr12	48904110	48931840	48917975	ENSG00000139537.10	+	protein_coding	KNOWN	CCDC65	5	9	0.782454
chr12	48921518	48926474	48923996	ENSG00000134285.10	-	protein_coding	KNOWN	FKBP11	13	6	0.731697
chr12	48921963	48939663	48930813	ENSG00000255863.2	-	protein_coding	KNOWN	AC073610.5	1	3	0.949609
chr12	48927939	48928033	48927986	ENSG00000281789.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.731697
chr12	48935723	48957551	48946637	ENSG00000134287.9	-	protein_coding	KNOWN	ARF3	10	6	1.003621
chr12	48965340	48971763	48968551	ENSG00000169884.13	-	protein_coding	KNOWN	WNT10B	6	6	0.918273
chr12	48975543	48975646	48975594	ENSG00000200303.1	+	snRNA	KNOWN	RNU6-940P	1	1	1.327880
chr12	48978453	48981676	48980064	ENSG00000125084.11	+	protein_coding	KNOWN	WNT1	2	5	1.327880
chr12	48995149	48999309	48997229	ENSG00000181418.7	-	protein_coding	KNOWN	DDN	1	2	1.266021
chr12	48995150	48996334	48995742	ENSG00000258283.1	+	antisense	KNOWN	RP11-386G11.3	1	2	1.266021
chr12	48998367	49019235	49008801	ENSG00000257913.2	+	antisense	KNOWN	RP11-386G11.5	4	3	1.079566
chr12	49002274	49019197	49010735	ENSG00000181929.11	-	protein_coding	KNOWN	PRKAG1	20	12	1.037046
chr12	49018975	49059774	49039374	ENSG00000167548.14	-	protein_coding	KNOWN	KMT2D	7	54	1.353355
chr12	49064685	49070025	49067355	ENSG00000167550.10	-	protein_coding	KNOWN	RHEBL1	4	8	1.583508
chr12	49075039	49075802	49075420	ENSG00000277672.1	+	processed_pseudogene	KNOWN	RP11-386G11.11	1	2	0.979262
chr12	49089421	49094819	49092120	ENSG00000139549.2	-	protein_coding	KNOWN	DHH	1	3	1.079921
chr12	49090208	49093312	49091760	ENSG00000257346.1	+	antisense	KNOWN	RP11-386G11.8	2	3	1.091992
chr12	49096551	49110900	49103725	ENSG00000139636.15	-	protein_coding	KNOWN	LMBR1L	30	18	1.082286
chr12	49127782	49147869	49137825	ENSG00000258017.1	+	antisense	KNOWN	RP11-386G11.10	5	2	0.940590
chr12	49127782	49131397	49129589	ENSG00000123416.15	-	protein_coding	KNOWN	TUBA1B	8	5	0.938795
chr12	49132853	49132947	49132900	ENSG00000200309.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.940984
chr12	49184796	49189324	49187060	ENSG00000167552.13	-	protein_coding	KNOWN	TUBA1A	9	5	0.630412
chr12	49188736	49274603	49231669	ENSG00000167553.14	+	protein_coding	KNOWN	TUBA1C	9	5	0.776018
chr12	49196784	49197062	49196923	ENSG00000274017.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.819739
chr12	49232790	49264756	49248773	ENSG00000258101.2	-	antisense	KNOWN	RP11-977B10.2	1	2	0.789559
chr12	49265156	49273306	49269231	ENSG00000258232.2	-	antisense	KNOWN	RP11-161H23.5	1	2	0.915401
chr12	49292631	49324576	49308603	ENSG00000258334.1	-	antisense	KNOWN	RP11-161H23.9	1	8	0.890526
chr12	49293252	49298686	49295969	ENSG00000135406.13	+	protein_coding	KNOWN	PRPH	7	9	0.884300
chr12	49323236	49331731	49327483	ENSG00000135451.12	+	protein_coding	KNOWN	TROAP	16	15	0.960348
chr12	49332411	49337188	49334799	ENSG00000186897.4	-	protein_coding	KNOWN	C1QL4	1	2	1.204018
chr12	49346917	49357546	49352231	ENSG00000178401.14	+	protein_coding	KNOWN	DNAJC22	4	4	0.917613
chr12	49366584	49527424	49447004	ENSG00000123352.17	+	protein_coding	KNOWN	SPATS2	23	15	0.532713
chr12	49389516	49390162	49389839	ENSG00000257954.1	+	processed_pseudogene	KNOWN	RP11-161H23.10	1	1	0.505285
chr12	49442424	49442652	49442538	ENSG00000257464.1	-	processed_pseudogene	KNOWN	RP11-161H23.8	1	1	0.494090
chr12	49539157	49558308	49548732	ENSG00000135519.6	+	protein_coding	KNOWN	KCNH3	4	15	0.951797
chr12	49556544	49568153	49562348	ENSG00000187778.13	-	protein_coding	KNOWN	MCRS1	16	16	1.137664
chr12	49568218	49644666	49606442	ENSG00000110844.13	+	protein_coding	KNOWN	PRPF40B	16	26	0.906635
chr12	49576840	49577505	49577172	ENSG00000257964.1	-	antisense	KNOWN	RP11-133N21.10	1	2	0.898331
chr12	49582885	49605639	49594262	ENSG00000135436.8	-	protein_coding	KNOWN	FAM186B	5	7	0.970086
chr12	49593104	49593213	49593158	ENSG00000199237.1	+	snRNA	KNOWN	RNU6-834P	1	1	1.002724
chr12	49594091	49594258	49594174	ENSG00000258284.1	+	processed_pseudogene	KNOWN	POLR2KP1	1	1	1.002724
chr12	49595148	49595688	49595418	ENSG00000257243.1	+	processed_pseudogene	KNOWN	RP11-133N21.7	1	1	1.002724
chr12	49619334	49619612	49619473	ENSG00000258104.1	+	processed_pseudogene	KNOWN	HIGD1AP9	1	1	0.791818
chr12	49636499	49708165	49672332	ENSG00000161791.13	-	protein_coding	KNOWN	FMNL3	7	27	0.814818
chr12	49707725	49764934	49736329	ENSG00000139644.12	+	protein_coding	KNOWN	TMBIM6	28	11	0.663689
chr12	49709237	49709336	49709286	ENSG00000257570.1	+	processed_pseudogene	KNOWN	RP11-133N21.12	1	1	0.558458
chr12	49770960	49771136	49771048	ENSG00000257730.1	+	processed_pseudogene	KNOWN	LSM6P2	1	1	0.733538
chr12	49791146	49828750	49809948	ENSG00000167566.16	-	protein_coding	KNOWN	NCKAP5L	5	13	0.931760
chr12	49828542	49841143	49834842	ENSG00000258057.5	+	antisense	KNOWN	BCDIN3D-AS1	3	4	0.752964
chr12	49836039	49843129	49839584	ENSG00000186666.5	-	protein_coding	KNOWN	BCDIN3D	2	2	0.732160
chr12	49861207	49865802	49863504	ENSG00000257253.2	+	lincRNA	KNOWN	RP11-70F11.7	1	4	0.548221
chr12	49863173	49863503	49863338	ENSG00000242041.1	+	processed_pseudogene	KNOWN	RP11-70F11.2	1	1	0.548221
chr12	49866896	49904217	49885556	ENSG00000135472.8	-	protein_coding	KNOWN	FAIM2	7	12	0.867111
chr12	49908882	49911863	49910372	ENSG00000258135.5	-	lincRNA	KNOWN	RP11-70F11.11	5	4	1.051501
chr12	49911953	49930320	49921136	ENSG00000257771.5	+	lincRNA	KNOWN	RP11-70F11.8	5	6	0.985326
chr12	49950741	49958881	49954811	ENSG00000167580.7	+	protein_coding	KNOWN	AQP2	3	6	0.939989
chr12	49951512	49962924	49957218	ENSG00000257588.1	-	antisense	KNOWN	RP11-469H8.6	3	3	0.939989
chr12	49954639	49956125	49955382	ENSG00000257378.1	-	antisense	KNOWN	RP11-469H8.8	1	2	0.939989
chr12	49961870	49965681	49963775	ENSG00000161798.6	+	protein_coding	KNOWN	AQP5	2	4	0.939989
chr12	49967194	49977139	49972166	ENSG00000086159.12	+	protein_coding	KNOWN	AQP6	5	7	0.935577
chr12	49976923	50033136	50005029	ENSG00000161800.12	-	protein_coding	KNOWN	RACGAP1	28	19	0.647926
chr12	50057548	50083611	50070579	ENSG00000110881.11	+	protein_coding	KNOWN	ASIC1	9	13	0.816003
chr12	50084972	50100712	50092842	ENSG00000066117.14	+	protein_coding	KNOWN	SMARCD1	12	13	0.943534
chr12	50103819	50111319	50107569	ENSG00000167588.12	+	protein_coding	KNOWN	GPD1	7	8	1.034782
chr12	50111979	50120457	50116218	ENSG00000178449.8	+	protein_coding	KNOWN	COX14	4	3	0.988415
chr12	50112197	50165618	50138907	ENSG00000272368.2	+	antisense	KNOWN	RP4-605O3.4	2	2	0.723987
chr12	50129306	50167533	50148419	ENSG00000139624.12	-	protein_coding	KNOWN	CERS5	28	12	0.597389
chr12	50175788	50283546	50229667	ENSG00000050405.13	-	protein_coding	KNOWN	LIMA1	16	12	0.664886
chr12	50185580	50191363	50188471	ENSG00000257298.1	-	sense_intronic	KNOWN	RP3-405J10.3	1	2	0.701474
chr12	50217662	50218343	50218002	ENSG00000257531.2	-	transcribed_processed_pseudogene	KNOWN	RP3-405J10.2	1	2	0.598003
chr12	50219604	50229984	50224794	ENSG00000257256.1	+	antisense	KNOWN	RP3-405J10.4	1	2	0.598003
chr12	50234142	50234212	50234177	ENSG00000221604.1	-	miRNA	KNOWN	MIR1293	1	1	0.582317
chr12	50256238	50256344	50256291	ENSG00000212496.1	-	snRNA	KNOWN	RNU6-1093P	1	1	0.635307
chr12	50286244	50289231	50287737	ENSG00000278842.1	+	processed_pseudogene	KNOWN	RP3-405J10.5	1	4	0.673888
chr12	50326230	50396622	50361426	ENSG00000185958.9	-	protein_coding	KNOWN	FAM186A	4	8	0.495208
chr12	50365652	50366086	50365869	ENSG00000244266.1	+	processed_pseudogene	KNOWN	RP11-112N23.1	1	1	0.590243
chr12	50392383	50480004	50436193	ENSG00000161813.20	+	protein_coding	KNOWN	LARP4	21	16	0.398734
chr12	50504985	50748667	50626826	ENSG00000066084.12	+	protein_coding	KNOWN	DIP2B	5	38	0.437032
chr12	50633273	50633376	50633324	ENSG00000207136.1	+	snRNA	KNOWN	RNU6-769P	1	1	0.340379
chr12	50656973	50657078	50657025	ENSG00000200183.1	+	snRNA	KNOWN	RNU6-238P	1	1	0.356448
chr12	50743568	50743684	50743626	ENSG00000200428.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.255491
chr12	50756892	50757433	50757162	ENSG00000271018.1	+	processed_pseudogene	KNOWN	RP11-60E8.2	1	2	0.394111
chr12	50763710	50821122	50792416	ENSG00000123268.8	+	protein_coding	KNOWN	ATF1	5	7	0.441615
chr12	50806335	50806437	50806386	ENSG00000271490.1	-	processed_pseudogene	KNOWN	RP11-60E8.4	1	1	0.181427
chr12	50841498	50841785	50841641	ENSG00000243075.3	-	misc_RNA	KNOWN	RN7SL519P	1	1	0.068659
chr12	50842920	50887884	50865402	ENSG00000186452.10	+	protein_coding	KNOWN	TMPRSS12	2	5	0.126485
chr12	50847925	50848312	50848118	ENSG00000271621.1	-	processed_pseudogene	KNOWN	RP11-60E8.3	1	1	0.068659
chr12	50923472	50932517	50927994	ENSG00000185432.11	+	protein_coding	KNOWN	METTL7A	5	3	0.315936
chr12	50934942	50935464	50935203	ENSG00000274156.1	-	lincRNA	KNOWN	RP11-407N8.6	1	1	0.024529
chr12	50939927	50940026	50939976	ENSG00000199740.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.024529
chr12	50949117	50949384	50949250	ENSG00000271596.1	-	processed_pseudogene	KNOWN	RP11-407N8.4	1	1	0.024529
chr12	50953922	50970506	50962214	ENSG00000214511.3	+	protein_coding	KNOWN	HIGD1C	1	3	0.282158
chr12	50953924	50954356	50954140	ENSG00000274797.1	-	antisense	KNOWN	RP11-407N8.5	1	1	0.284637
chr12	50979401	51028566	51003983	ENSG00000110911.14	-	protein_coding	KNOWN	SLC11A2	26	18	0.373246
chr12	51014134	51014241	51014187	ENSG00000272028.1	-	snRNA	KNOWN	RNU6-87P	1	1	0.522626
chr12	51037499	51037602	51037550	ENSG00000199903.1	+	snRNA	KNOWN	RNU6-1273P	1	1	0.551423
chr12	51047962	51060424	51054193	ENSG00000050426.15	+	protein_coding	KNOWN	LETMD1	38	9	0.716989
chr12	51049921	51050025	51049973	ENSG00000277201.1	+	miRNA	NOVEL	AC087884.1	1	1	0.600902
chr12	51061205	51083664	51072434	ENSG00000110925.6	-	protein_coding	KNOWN	CSRNP2	8	5	0.660014
chr12	51093663	51173134	51133398	ENSG00000135457.9	-	protein_coding	KNOWN	TFCP2	5	15	0.327007
chr12	51106817	51107144	51106980	ENSG00000244540.2	+	processed_pseudogene	KNOWN	RP11-416A17.1	1	1	0.493354
chr12	51124628	51125381	51125004	ENSG00000257246.1	-	processed_pseudogene	KNOWN	PHBP19	1	1	0.077708
chr12	51156868	51156977	51156922	ENSG00000200953.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.410353
chr12	51162901	51163007	51162954	ENSG00000199824.1	+	snRNA	KNOWN	RNU6-199P	1	1	0.410353
chr12	51186936	51217693	51202314	ENSG00000184271.15	-	protein_coding	KNOWN	POU6F1	9	11	0.717722
chr12	51201684	51202581	51202132	ENSG00000278126.1	-	sense_intronic	KNOWN	RP11-454E5.4	1	1	0.832178
chr12	51238292	51271362	51254827	ENSG00000183283.15	+	protein_coding	KNOWN	DAZAP2	15	5	0.521071
chr12	51244558	51270890	51257724	ENSG00000170545.16	-	protein_coding	KNOWN	SMAGP	8	5	0.559204
chr12	51281038	51324668	51302853	ENSG00000110934.10	-	protein_coding	KNOWN	BIN2	10	13	0.411065
chr12	51328443	51346679	51337561	ENSG00000139610.1	-	protein_coding	KNOWN	CELA1	1	8	0.649266
chr12	51351247	51392867	51372057	ENSG00000139629.15	-	protein_coding	KNOWN	GALNT6	19	12	0.687093
chr12	51391317	51515763	51453540	ENSG00000050438.16	+	protein_coding	KNOWN	SLC4A8	18	25	0.397126
chr12	51421956	51424611	51423283	ENSG00000271065.1	-	antisense	KNOWN	RP11-607P23.1	1	2	0.385491
chr12	51590266	51812864	51701565	ENSG00000196876.13	+	protein_coding	KNOWN	SCN8A	10	27	0.304444
chr12	51712469	51713606	51713037	ENSG00000257851.2	-	processed_pseudogene	KNOWN	HNRNPA3P10	1	1	0.402060
chr12	51809705	51810600	51810152	ENSG00000260122.1	-	lincRNA	KNOWN	RP11-923I11.3	1	1	0.549502
chr12	51817889	51818358	51818123	ENSG00000278451.1	-	antisense	KNOWN	RP11-923I11.8	1	1	0.586756
chr12	51817899	51820150	51819024	ENSG00000261586.2	+	lincRNA	KNOWN	RP11-923I11.6	1	2	0.586756
chr12	51820459	51822415	51821437	ENSG00000261308.1	-	processed_pseudogene	KNOWN	FIGNL2	1	1	0.586756
chr12	51823503	51835496	51829499	ENSG00000260473.1	+	lincRNA	KNOWN	RP11-923I11.4	1	5	0.715764
chr12	51848223	51852729	51850476	ENSG00000259887.1	+	lincRNA	KNOWN	RP11-923I11.5	1	3	0.835647
chr12	51887960	51891664	51889812	ENSG00000167612.12	+	protein_coding	KNOWN	ANKRD33	8	6	0.591944
chr12	51900565	51901336	51900950	ENSG00000258021.1	+	processed_pseudogene	KNOWN	RP11-1100L3.4	1	1	0.796343
chr12	51906908	51923361	51915134	ENSG00000139567.12	+	protein_coding	KNOWN	ACVRL1	8	10	0.822830
chr12	51951667	51997078	51974372	ENSG00000135503.12	+	protein_coding	KNOWN	ACVR1B	7	10	0.642900
chr12	51987657	51987763	51987710	ENSG00000206992.1	+	snRNA	KNOWN	RNU6-574P	1	1	0.615554
chr12	52006940	52015889	52011414	ENSG00000161835.10	+	protein_coding	KNOWN	GRASP	8	8	0.777894
chr12	52022832	52059507	52041169	ENSG00000123358.19	+	protein_coding	KNOWN	NR4A1	22	8	0.933102
chr12	52058459	52059503	52058981	ENSG00000259884.1	-	lincRNA	KNOWN	RP11-1100L3.8	2	2	1.154533
chr12	52069246	52077494	52073370	ENSG00000123395.14	+	protein_coding	KNOWN	ATG101	7	4	1.129874
chr12	52076841	52082084	52079462	ENSG00000257663.1	-	antisense	KNOWN	RP11-1100L3.7	1	2	1.127397
chr12	52079696	52108261	52093978	ENSG00000257542.4	+	transcribed_unprocessed_pseudogene	KNOWN	OR7E47P	3	3	1.067462
chr12	52084744	52092285	52088514	ENSG00000272724.1	+	sense_intronic	KNOWN	OR7E47P	1	3	1.098978
chr12	52092485	52104297	52098391	ENSG00000257989.1	-	lincRNA	KNOWN	RP1-288H2.2	1	3	1.033648
chr12	52110634	52110704	52110669	ENSG00000265009.1	-	miRNA	NOVEL	AC078864.1	1	1	0.223903
chr12	52113925	52114012	52113968	ENSG00000265804.1	+	miRNA	NOVEL	AC078864.2	1	1	0.223903
chr12	52168996	52192000	52180498	ENSG00000167767.13	-	protein_coding	KNOWN	KRT80	3	9	1.213688
chr12	52205584	52210855	52208219	ENSG00000257137.5	-	lincRNA	KNOWN	C12orf80	3	4	1.048163
chr12	52210930	52223804	52217367	ENSG00000258279.2	+	lincRNA	KNOWN	LINC00592	1	5	0.822104
chr12	52229093	52229588	52229340	ENSG00000257649.1	-	processed_pseudogene	KNOWN	METTL7AP1	1	1	0.822104
chr12	52232520	52252186	52242353	ENSG00000135480.14	+	protein_coding	KNOWN	KRT7	13	9	0.825666
chr12	52241481	52241613	52241547	ENSG00000281415.1	-	miRNA	NOVEL	AC021066.1	1	1	0.796536
chr12	52245048	52247448	52246248	ENSG00000257671.1	-	antisense	KNOWN	RP3-416H24.1	1	2	0.796536
chr12	52249300	52309163	52279231	ENSG00000170442.11	+	protein_coding	KNOWN	KRT86	3	11	0.751848
chr12	52250466	52258867	52254666	ENSG00000135477.11	-	transcribed_unprocessed_pseudogene	KNOWN	KRT87P	2	9	1.058483
chr12	52274647	52279156	52276901	ENSG00000257830.1	-	antisense	KNOWN	RP11-845M18.7	1	2	0.567077
chr12	52285913	52291534	52288723	ENSG00000205426.10	-	protein_coding	KNOWN	KRT81	2	10	0.582359
chr12	52306616	52308371	52307493	ENSG00000257829.1	-	antisense	KNOWN	RP11-845M18.6	1	2	0.623037
chr12	52314301	52321398	52317849	ENSG00000170523.3	-	protein_coding	KNOWN	KRT83	1	9	1.076050
chr12	52341197	52353156	52347176	ENSG00000274928.5	+	transcribed_unprocessed_pseudogene	KNOWN	KRT89P	2	8	0.567712
chr12	52360006	52367481	52363743	ENSG00000135443.8	-	protein_coding	KNOWN	KRT85	3	9	0.488219
chr12	52377812	52385652	52381732	ENSG00000161849.3	-	protein_coding	KNOWN	KRT84	1	9	0.831929
chr12	52380460	52402407	52391433	ENSG00000258253.1	+	antisense	KNOWN	RP3-416H24.4	1	2	0.722266
chr12	52393931	52406355	52400143	ENSG00000161850.2	-	protein_coding	KNOWN	KRT82	1	9	0.637960
chr12	52407580	52428494	52418037	ENSG00000257500.1	+	antisense	KNOWN	RP11-1020M18.10	1	3	0.514520
chr12	52413960	52421876	52417918	ENSG00000257844.1	-	unprocessed_pseudogene	KNOWN	KRT90P	1	6	0.498375
chr12	52424070	52434525	52429297	ENSG00000170454.5	-	protein_coding	KNOWN	KRT75	1	9	0.585218
chr12	52446651	52452126	52449388	ENSG00000185479.5	-	protein_coding	KNOWN	KRT6B	1	9	0.510562
chr12	52449492	52449620	52449556	ENSG00000280966.1	+	miRNA	NOVEL	AC055736.2	1	1	0.698981
chr12	52468516	52473785	52471150	ENSG00000170465.9	-	protein_coding	KNOWN	KRT6C	2	9	0.126327
chr12	52471155	52471283	52471219	ENSG00000281474.1	+	miRNA	NOVEL	AC055736.4	1	1	0.091992
chr12	52487174	52493257	52490215	ENSG00000205420.10	-	protein_coding	KNOWN	KRT6A	5	9	0.248146
chr12	52490592	52490720	52490656	ENSG00000281194.1	+	miRNA	NOVEL	AC055736.3	1	1	0.383546
chr12	52514575	52520687	52517631	ENSG00000186081.11	-	protein_coding	KNOWN	KRT5	11	9	0.390515
chr12	52517613	52517741	52517677	ENSG00000280827.1	+	miRNA	NOVEL	AC055736.1	1	1	0.390515
chr12	52543909	52553147	52548528	ENSG00000139648.6	-	protein_coding	KNOWN	KRT71	1	9	0.699928
chr12	52565782	52573825	52569803	ENSG00000170484.9	-	protein_coding	KNOWN	KRT74	3	10	0.745794
chr12	52585589	52601538	52593563	ENSG00000170486.10	-	protein_coding	KNOWN	KRT72	5	10	0.540065
chr12	52601467	52615305	52608386	ENSG00000257495.5	+	antisense	KNOWN	KRT73-AS1	3	4	0.521197
chr12	52607570	52618559	52613064	ENSG00000186049.8	-	protein_coding	KNOWN	KRT73	3	9	0.535812
chr12	52632866	52634456	52633661	ENSG00000258120.1	-	unprocessed_pseudogene	KNOWN	KRT128P	1	3	0.460714
chr12	52644558	52652164	52648361	ENSG00000172867.3	-	protein_coding	KNOWN	KRT2	2	9	0.417932
chr12	52674736	52680407	52677571	ENSG00000167768.4	-	protein_coding	KNOWN	KRT1	2	9	0.276114
chr12	52689626	52703463	52696544	ENSG00000189182.9	-	protein_coding	KNOWN	KRT77	3	10	0.673636
chr12	52692605	52696788	52694696	ENSG00000257700.1	+	antisense	KNOWN	RP11-641A6.3	1	3	0.684649
chr12	52715567	52719040	52717303	ENSG00000257402.1	-	unprocessed_pseudogene	KNOWN	KRT126P	1	5	0.413920
chr12	52730425	52732865	52731645	ENSG00000257616.1	+	processed_pseudogene	KNOWN	RP11-641A6.5	1	1	0.233004
chr12	52735266	52736142	52735704	ENSG00000258036.1	-	unprocessed_pseudogene	KNOWN	KRT125P	1	2	0.233004
chr12	52746596	52748308	52747452	ENSG00000257343.1	-	unprocessed_pseudogene	KNOWN	RP11-641A6.8	1	3	0.233004
chr12	52748776	52750127	52749451	ENSG00000257675.1	+	processed_pseudogene	KNOWN	BTBD10P1	1	1	0.250279
chr12	52751978	52753821	52752899	ENSG00000257125.1	-	unprocessed_pseudogene	KNOWN	KRT127P	1	3	0.415341
chr12	52763405	52763893	52763649	ENSG00000258071.1	+	processed_pseudogene	KNOWN	ARL2BPP2	1	1	0.415341
chr12	52768155	52777345	52772750	ENSG00000185069.2	-	protein_coding	KNOWN	KRT76	1	9	0.431634
chr12	52782650	52782839	52782744	ENSG00000257404.1	+	processed_pseudogene	KNOWN	RP11-153F5.2	1	1	0.435724
chr12	52789685	52796117	52792901	ENSG00000186442.7	-	protein_coding	KNOWN	KRT3	1	9	0.645145
chr12	52806549	52814551	52810550	ENSG00000170477.12	-	protein_coding	KNOWN	KRT4	5	9	0.525216
chr12	52821410	52834295	52827852	ENSG00000185640.5	-	protein_coding	KNOWN	KRT79	3	9	0.511405
chr12	52824221	52824358	52824289	ENSG00000281110.1	+	miRNA	NOVEL	AC107016.2	1	1	0.426175
chr12	52837403	52837739	52837571	ENSG00000257389.1	+	processed_pseudogene	KNOWN	RP11-153F5.3	1	1	0.681804
chr12	52837804	52849092	52843448	ENSG00000170423.12	-	protein_coding	KNOWN	KRT78	5	9	0.681804
chr12	52885429	52886385	52885907	ENSG00000241146.1	+	processed_pseudogene	KNOWN	RPL7P41	1	1	0.925420
chr12	52897187	52949954	52923570	ENSG00000170421.12	-	protein_coding	KNOWN	KRT8	17	9	0.915448
chr12	52948871	52952901	52950886	ENSG00000111057.10	+	protein_coding	KNOWN	KRT18	7	8	0.932751
chr12	52951708	52951795	52951751	ENSG00000265039.1	+	miRNA	NOVEL	AC107016.1	1	1	0.982581
chr12	53006158	53042209	53024183	ENSG00000063046.17	+	protein_coding	KNOWN	EIF4B	14	15	0.781480
chr12	53012104	53013921	53013012	ENSG00000257475.2	+	sense_intronic	KNOWN	RP11-983P16.2	1	2	0.761843
chr12	53014596	53054438	53034517	ENSG00000257337.6	-	antisense	KNOWN	RP11-983P16.4	8	4	0.913118
chr12	53046969	53064372	53055670	ENSG00000111077.17	+	protein_coding	KNOWN	TNS2	20	30	1.656862
chr12	53056944	53057012	53056978	ENSG00000278108.1	+	miRNA	KNOWN	MIR6757	1	1	1.832090
chr12	53064316	53079420	53071868	ENSG00000167778.8	-	protein_coding	KNOWN	SPRYD3	6	12	1.607819
chr12	53097436	53102345	53099890	ENSG00000167779.7	+	protein_coding	KNOWN	IGFBP6	4	4	0.993344
chr12	53103518	53124538	53114028	ENSG00000167780.11	+	protein_coding	KNOWN	SOAT2	3	15	0.913251
chr12	53131350	53131985	53131667	ENSG00000258074.1	+	processed_pseudogene	KNOWN	VTI1BP3	1	1	0.951248
chr12	53138545	53138651	53138598	ENSG00000238669.1	-	snRNA	KNOWN	RNU6-333P	1	1	0.951248
chr12	53142053	53142327	53142190	ENSG00000258016.1	+	processed_pseudogene	KNOWN	HIGD1AP1	1	1	0.951248
chr12	53153272	53154484	53153878	ENSG00000257790.1	+	processed_pseudogene	KNOWN	EIF4A1P4	1	1	0.844064
chr12	53157663	53180909	53169286	ENSG00000139631.18	-	protein_coding	KNOWN	CSAD	20	17	0.868291
chr12	53159586	53161000	53160293	ENSG00000257808.1	+	lincRNA	KNOWN	RP11-1136G11.8	1	3	0.844064
chr12	53180700	53195141	53187920	ENSG00000139651.10	+	protein_coding	KNOWN	ZNF740	4	7	0.981216
chr12	53191318	53207307	53199312	ENSG00000139626.15	-	protein_coding	KNOWN	ITGB7	14	16	1.135895
chr12	53210567	53232980	53221773	ENSG00000172819.16	-	protein_coding	KNOWN	RARG	18	10	0.887993
chr12	53251251	53254405	53252828	ENSG00000182544.8	+	protein_coding	KNOWN	MFSD5	5	2	0.953664
chr12	53268299	53293643	53280971	ENSG00000135476.11	+	protein_coding	KNOWN	ESPL1	9	31	1.014285
chr12	53295291	53299450	53297370	ENSG00000123349.13	+	protein_coding	KNOWN	PFDN5	20	6	1.027503
chr12	53298655	53300314	53299484	ENSG00000257605.2	-	antisense	KNOWN	RP11-680A11.5	1	2	1.027503
chr12	53299686	53307177	53303431	ENSG00000139637.13	+	protein_coding	KNOWN	C12orf10	10	7	1.027503
chr12	53307456	53324864	53316160	ENSG00000094914.12	-	protein_coding	KNOWN	AAAS	20	16	0.982241
chr12	53326575	53345315	53335945	ENSG00000170374.5	-	protein_coding	KNOWN	SP7	4	3	1.101330
chr12	53380176	53416446	53398311	ENSG00000185591.9	+	protein_coding	KNOWN	SP1	4	6	0.861928
chr12	53408146	53408400	53408273	ENSG00000280756.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.876263
chr12	53423855	53431534	53427694	ENSG00000135409.10	+	protein_coding	KNOWN	AMHR2	7	11	0.904724
chr12	53441605	53446645	53444125	ENSG00000205352.10	+	protein_coding	KNOWN	PRR13	13	4	1.192186
chr12	53441741	53467528	53454634	ENSG00000257379.1	+	processed_transcript	KNOWN	RP11-793H13.8	1	13	0.869270
chr12	53452102	53481162	53466632	ENSG00000197111.15	+	protein_coding	KNOWN	PCBP2	26	15	0.945297
chr12	53464468	53465057	53464762	ENSG00000282977.1	+	non_coding	KNOWN	PCBP2-OT1	1	1	0.717143
chr12	53464720	53464901	53464810	ENSG00000273658.1	+	misc_RNA	NOVEL	uc_338	1	1	0.717143
chr12	53479669	53500063	53489866	ENSG00000139625.12	-	protein_coding	KNOWN	MAP3K12	11	15	1.196941
chr12	53500162	53500936	53500549	ENSG00000270175.1	-	antisense	KNOWN	RP11-793H13.11	1	1	1.079783
chr12	53500921	53506431	53503676	ENSG00000139546.10	+	protein_coding	KNOWN	TARBP2	20	9	1.079783
chr12	53506688	53625979	53566333	ENSG00000267281.2	-	protein_coding	KNOWN	RP11-793H13.10	2	13	0.754089
chr12	53506690	53507638	53507164	ENSG00000139574.8	-	protein_coding	KNOWN	NPFF	1	3	1.079783
chr12	53507856	53626410	53567133	ENSG00000170653.18	-	protein_coding	KNOWN	ATF7	12	13	0.749470
chr12	53513984	53517608	53515796	ENSG00000257550.1	+	antisense	KNOWN	RP11-793H13.3	1	3	1.176881
chr12	53574632	53576103	53575367	ENSG00000275488.1	+	processed_pseudogene	KNOWN	RP11-793H13.12	1	2	0.779109
chr12	53632726	53677408	53655067	ENSG00000135390.17	-	protein_coding	KNOWN	ATP5G2	9	6	0.735086
chr12	53632788	53633151	53632969	ENSG00000213470.4	-	processed_pseudogene	KNOWN	RP11-972K6.1	1	1	0.865330
chr12	53708517	53727745	53718131	ENSG00000012822.15	-	protein_coding	KNOWN	CALCOCO1	22	15	1.066403
chr12	53750447	53757034	53753740	ENSG00000260492.2	-	lincRNA	KNOWN	CISTR	2	3	1.015371
chr12	53754358	53762104	53758231	ENSG00000260030.1	+	lincRNA	KNOWN	RP11-686F15.2	1	2	1.015371
chr12	53816185	53816479	53816332	ENSG00000253053.1	+	misc_RNA	KNOWN	RN7SKP289	1	1	0.571682
chr12	53935328	53939643	53937485	ENSG00000249641.2	-	antisense	KNOWN	HOXC13-AS	1	3	0.401320
chr12	53938765	53946544	53942654	ENSG00000123364.4	+	protein_coding	KNOWN	HOXC13	1	2	0.401320
chr12	53954834	53958956	53956895	ENSG00000123407.3	+	protein_coding	KNOWN	HOXC12	1	2	0.893011
chr12	53962308	53974956	53968632	ENSG00000228630.5	-	antisense	KNOWN	HOTAIR	5	7	0.826874
chr12	53963629	53963697	53963663	ENSG00000275589.1	+	misc_RNA	NOVEL	HOTAIR_2	1	1	0.893011
chr12	53965965	53966061	53966013	ENSG00000277994.1	+	misc_RNA	NOVEL	HOTAIR_3	1	1	0.893011
chr12	53968002	53968178	53968090	ENSG00000274817.1	+	misc_RNA	NOVEL	HOTAIR_4	1	1	0.893011
chr12	53968351	53968501	53968426	ENSG00000277129.1	+	misc_RNA	NOVEL	HOTAIR_5	1	1	0.893011
chr12	53973126	53977643	53975384	ENSG00000123388.4	+	protein_coding	KNOWN	HOXC11	2	2	0.724260
chr12	53981509	53985519	53983514	ENSG00000251151.2	-	processed_transcript	KNOWN	HOXC-AS3	4	3	0.724260
chr12	53985065	53990279	53987672	ENSG00000180818.4	+	protein_coding	KNOWN	HOXC10	5	2	0.735247
chr12	53985845	54034888	54010366	ENSG00000273049.1	+	protein_coding	KNOWN	RP11-834C11.12	1	2	0.940722
chr12	53990624	54030823	54010723	ENSG00000197757.7	+	protein_coding	KNOWN	HOXC6	4	3	0.960199
chr12	53991732	53991852	53991792	ENSG00000207924.2	+	miRNA	KNOWN	MIR196A2	1	1	0.928856
chr12	53993810	53996785	53995297	ENSG00000250133.2	-	processed_transcript	KNOWN	HOXC-AS2	2	3	0.928856
chr12	53994895	54003337	53999116	ENSG00000180806.4	+	protein_coding	KNOWN	HOXC9	3	3	0.928856
chr12	53999022	54000010	53999516	ENSG00000250451.5	-	antisense	KNOWN	HOXC-AS1	2	2	0.928856
chr12	54009106	54012362	54010734	ENSG00000037965.5	+	protein_coding	KNOWN	HOXC8	1	2	0.973312
chr12	54016931	54056030	54036480	ENSG00000198353.7	+	protein_coding	KNOWN	HOXC4	3	4	0.928498
chr12	54017110	54035361	54026235	ENSG00000273046.1	+	processed_transcript	KNOWN	RP11-834C11.14	1	2	0.984537
chr12	54019910	54022589	54021249	ENSG00000260597.1	+	lincRNA	KNOWN	AC012531.25	1	1	0.990112
chr12	54032853	54035358	54034105	ENSG00000172789.3	+	protein_coding	KNOWN	HOXC5	1	2	0.971137
chr12	54033950	54034045	54033997	ENSG00000207571.1	+	miRNA	KNOWN	MIR615	1	1	0.971137
chr12	54058254	54122234	54090244	ENSG00000248265.1	+	lincRNA	KNOWN	FLJ12825	1	2	0.551596
chr12	54076838	54081903	54079370	ENSG00000250654.7	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-834C11.7	4	3	0.575139
chr12	54082118	54102693	54092405	ENSG00000249388.1	+	lincRNA	KNOWN	RP11-834C11.6	1	2	0.455670
chr12	54085132	54125992	54105562	ENSG00000250432.5	-	lincRNA	KNOWN	RP11-834C11.5	4	4	0.526588
chr12	54099191	54099302	54099246	ENSG00000202146.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.381498
chr12	54121277	54189008	54155142	ENSG00000123415.15	-	protein_coding	KNOWN	SMUG1	25	9	0.734716
chr12	54126098	54142493	54134295	ENSG00000250742.2	+	lincRNA	KNOWN	RP11-834C11.4	2	3	0.788036
chr12	54142591	54147485	54145038	ENSG00000283073.1	+	lincRNA	KNOWN	RP11-834C11.15	1	4	0.817629
chr12	54145069	54147225	54146147	ENSG00000260470.1	-	lincRNA	KNOWN	RP11-834C11.11	1	1	0.817629
chr12	54162065	54164452	54163258	ENSG00000257534.1	-	lincRNA	KNOWN	RP11-834C11.10	1	2	0.724783
chr12	54163139	54168595	54165867	ENSG00000248576.1	+	antisense	KNOWN	RP11-834C11.8	1	3	0.724783
chr12	54230940	54280133	54255536	ENSG00000094916.13	-	protein_coding	KNOWN	CBX5	6	5	0.559557
chr12	54231397	54231476	54231436	ENSG00000265371.1	-	miRNA	KNOWN	MIR3198-2	1	1	0.692061
chr12	54255627	54255910	54255768	ENSG00000241785.3	-	misc_RNA	KNOWN	RN7SL390P	1	1	0.415341
chr12	54262615	54279063	54270839	ENSG00000257596.1	+	antisense	KNOWN	RP11-968A15.2	1	2	0.514333
chr12	54276631	54345083	54310857	ENSG00000258344.1	+	sense_overlapping	KNOWN	RP11-968A15.8	1	2	0.891197
chr12	54280193	54287088	54283640	ENSG00000135486.17	+	protein_coding	KNOWN	HNRNPA1	14	11	0.594977
chr12	54292111	54301121	54296616	ENSG00000123405.13	-	protein_coding	KNOWN	NFE2	5	4	1.012404
chr12	54301202	54351849	54326525	ENSG00000111481.9	+	protein_coding	KNOWN	COPZ1	18	10	0.954116
chr12	54317781	54317887	54317834	ENSG00000207381.1	-	snRNA	KNOWN	RNU6-950P	1	1	0.871602
chr12	54337208	54337316	54337262	ENSG00000199122.2	+	miRNA	KNOWN	MIR148B	1	1	1.018990
chr12	54344610	54344876	54344743	ENSG00000264028.2	+	misc_RNA	KNOWN	RN7SL744P	1	1	1.018990
chr12	54353661	54497688	54425674	ENSG00000258137.5	+	antisense	KNOWN	RP11-753H16.3	2	4	0.873021
chr12	54353792	54466985	54410388	ENSG00000258086.1	+	antisense	KNOWN	RP11-753H16.5	1	4	1.024060
chr12	54362445	54364487	54363466	ENSG00000139572.3	-	protein_coding	KNOWN	GPR84	2	2	0.867638
chr12	54369133	54391298	54380215	ENSG00000161642.17	-	protein_coding	KNOWN	ZNF385A	15	9	0.990685
chr12	54395261	54419460	54407360	ENSG00000161638.10	-	protein_coding	KNOWN	ITGA5	13	30	1.236239
chr12	54428303	54429403	54428853	ENSG00000257477.1	+	lincRNA	KNOWN	LINC01154	1	2	1.253924
chr12	54455950	54473602	54464776	ENSG00000170627.9	-	protein_coding	KNOWN	GTSF1	10	10	0.646043
chr12	54497711	54548238	54522974	ENSG00000123338.12	+	protein_coding	KNOWN	NCKAP1L	8	31	0.198882
chr12	54543111	54544105	54543608	ENSG00000257824.1	-	antisense	KNOWN	RP11-1049A21.2	1	2	0.227455
chr12	54549350	54579239	54564294	ENSG00000123360.11	+	protein_coding	KNOWN	PDE1B	9	16	0.374217
chr12	54575387	54588659	54582023	ENSG00000135447.16	-	protein_coding	KNOWN	PPP1R1A	4	7	0.034148
chr12	54608187	54610462	54609324	ENSG00000257780.5	-	unitary_pseudogene	KNOWN	GLYCAM1	5	4	0.219451
chr12	54630811	54634895	54632853	ENSG00000135413.8	-	protein_coding	KNOWN	LACRT	4	5	0.285633
chr12	54644591	54648493	54646542	ENSG00000161634.11	-	protein_coding	KNOWN	DCD	3	6	0.285633
chr12	54682973	54687434	54685203	ENSG00000257634.1	+	lincRNA	KNOWN	RP11-850F7.7	1	3	-0.430686
chr12	54802746	54803589	54803167	ENSG00000270858.1	-	processed_pseudogene	KNOWN	VDAC1P5	1	1	-0.216498
chr12	54830519	54858393	54844456	ENSG00000172551.10	+	protein_coding	KNOWN	MUCL1	5	5	-0.112248
chr12	54948018	54984746	54966382	ENSG00000135426.14	-	protein_coding	KNOWN	TESPA1	15	11	-0.067891
chr12	55009746	55014247	55011996	ENSG00000257870.1	+	lincRNA	KNOWN	RP11-616L12.1	1	3	0.086983
chr12	55019945	55030014	55024979	ENSG00000123307.3	+	protein_coding	KNOWN	NEUROD4	1	2	0.099387
chr12	55115533	55116473	55116003	ENSG00000196534.4	+	unitary_pseudogene	KNOWN	OR9K1P	1	1	-0.432535
chr12	55122668	55124120	55123394	ENSG00000257350.1	-	processed_pseudogene	KNOWN	RP11-616L12.4	1	1	-0.432535
chr12	55129681	55130802	55130241	ENSG00000170605.5	+	protein_coding	KNOWN	OR9K2	1	1	-0.546930
chr12	55158847	55159723	55159285	ENSG00000224622.1	+	unprocessed_pseudogene	KNOWN	OR9R1P	1	1	0.016540
chr12	55193882	55194786	55194334	ENSG00000227423.2	-	unprocessed_pseudogene	KNOWN	OR10U1P	1	1	-0.158235
chr12	55221025	55221975	55221500	ENSG00000179919.3	+	protein_coding	KNOWN	OR10A7	1	1	-0.152161
chr12	55247198	55248302	55247750	ENSG00000197706.3	+	protein_coding	KNOWN	OR6C74	1	1	-0.222117
chr12	55262539	55263431	55262985	ENSG00000213451.2	+	unprocessed_pseudogene	KNOWN	OR6C69P	1	1	-0.398995
chr12	55283750	55284641	55284195	ENSG00000205331.5	+	unprocessed_pseudogene	KNOWN	OR6C72P	1	1	-0.564803
chr12	55294288	55295232	55294760	ENSG00000188324.3	-	protein_coding	KNOWN	OR6C6	1	1	-0.681732
chr12	55311835	55312757	55312296	ENSG00000230307.1	+	unprocessed_pseudogene	KNOWN	OR6C5P	1	1	-0.232848
chr12	55320561	55321624	55321092	ENSG00000205330.3	+	protein_coding	KNOWN	OR6C1	1	1	-0.232848
chr12	55331701	55332636	55332168	ENSG00000205329.1	+	protein_coding	KNOWN	OR6C3	1	1	-0.212863
chr12	55342841	55343774	55343307	ENSG00000257757.1	+	unprocessed_pseudogene	KNOWN	OR6C7P	1	1	-0.212863
chr12	55365111	55366049	55365580	ENSG00000187857.3	+	protein_coding	KNOWN	OR6C75	1	1	-0.191801
chr12	55376824	55377736	55377280	ENSG00000203408.3	-	unprocessed_pseudogene	KNOWN	OR6C71P	1	1	-0.423846
chr12	55388445	55389374	55388909	ENSG00000233606.1	+	unprocessed_pseudogene	KNOWN	OR6C66P	1	1	-0.423846
chr12	55396340	55396697	55396518	ENSG00000257414.1	+	unprocessed_pseudogene	KNOWN	OR6C73P	1	1	-0.172980
chr12	55400430	55401505	55400967	ENSG00000205328.2	+	protein_coding	KNOWN	OR6C65	1	1	-0.172980
chr12	55411727	55414787	55413257	ENSG00000179899.8	-	processed_pseudogene	KNOWN	PHC1P1	1	1	-0.121002
chr12	55426254	55427192	55426723	ENSG00000185821.3	+	protein_coding	KNOWN	OR6C76	1	1	-0.121002
chr12	55434734	55585471	55510102	ENSG00000258763.5	-	antisense	KNOWN	RP11-110A12.2	4	4	-0.196888
chr12	55452214	55453152	55452683	ENSG00000179695.1	+	protein_coding	KNOWN	OR6C2	1	1	-0.306998
chr12	55469200	55470138	55469669	ENSG00000184954.4	-	protein_coding	KNOWN	OR6C70	1	1	-0.289800
chr12	55492378	55493316	55492847	ENSG00000205327.3	+	protein_coding	KNOWN	OR6C68	1	1	-0.283976
chr12	55522593	55523417	55523005	ENSG00000234670.1	+	unprocessed_pseudogene	KNOWN	OR6C64P	1	1	-0.143896
chr12	55551199	55552244	55551721	ENSG00000179626.3	+	protein_coding	KNOWN	OR6C4	1	1	-0.304361
chr12	55574415	55575344	55574879	ENSG00000179615.1	+	protein_coding	KNOWN	OR2AP1	1	1	0.084043
chr12	55611623	55612554	55612088	ENSG00000272937.1	+	unprocessed_pseudogene	KNOWN	OR6U2P	1	1	0.359613
chr12	55636860	55637854	55637357	ENSG00000175398.2	+	protein_coding	KNOWN	OR10P1	1	1	0.197345
chr12	55638912	55659795	55649353	ENSG00000258921.1	-	antisense	KNOWN	RP11-644F5.16	1	2	0.314988
chr12	55646195	55646663	55646429	ENSG00000272837.1	-	unprocessed_pseudogene	KNOWN	OR10AE3P	1	1	0.197345
chr12	55654558	55655168	55654863	ENSG00000258907.2	-	processed_pseudogene	KNOWN	RP11-644F5.15	1	1	0.448136
chr12	55662337	55662501	55662419	ENSG00000270458.1	-	processed_pseudogene	KNOWN	RP11-644F5.17	1	1	0.448136
chr12	55681546	55684611	55683078	ENSG00000170439.6	+	protein_coding	KNOWN	METTL7B	2	3	0.456332
chr12	55684568	55716043	55700305	ENSG00000135424.15	-	protein_coding	KNOWN	ITGA7	20	26	0.651086
chr12	55716036	55724703	55720369	ENSG00000258311.5	+	protein_coding	KNOWN	RP11-644F5.10	4	5	0.852416
chr12	55716037	55720087	55718062	ENSG00000135441.7	+	protein_coding	KNOWN	BLOC1S1	6	4	0.852416
chr12	55720367	55724705	55722536	ENSG00000135437.9	+	protein_coding	KNOWN	RDH5	11	5	0.852416
chr12	55725323	55729707	55727515	ENSG00000135404.11	-	protein_coding	KNOWN	CD63	16	8	0.852416
chr12	55729104	55730852	55729978	ENSG00000258056.2	+	antisense	KNOWN	RP11-644F5.11	1	2	1.026698
chr12	55731264	55731531	55731397	ENSG00000258045.2	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.209561
chr12	55732366	55732648	55732507	ENSG00000257384.1	-	processed_pseudogene	KNOWN	RP11-644F5.12	1	1	1.209561
chr12	55743280	55757278	55750279	ENSG00000135414.9	+	protein_coding	KNOWN	GDF11	2	4	1.060900
chr12	55752463	55817756	55785109	ENSG00000205323.8	-	protein_coding	KNOWN	SARNP	6	12	0.779365
chr12	55757275	55827546	55792410	ENSG00000257390.5	-	protein_coding	KNOWN	RP11-762I7.5	5	16	0.747993
chr12	55761550	55762628	55762089	ENSG00000257509.1	-	sense_intronic	KNOWN	RP11-762I7.4	1	2	0.923676
chr12	55817919	55821879	55819899	ENSG00000123353.9	+	protein_coding	KNOWN	ORMDL2	5	4	0.625115
chr12	55820960	55830824	55825892	ENSG00000135392.15	-	protein_coding	KNOWN	DNAJC14	5	8	0.647200
chr12	55829745	55836246	55832995	ENSG00000182796.12	+	unitary_pseudogene	KNOWN	TMEM198B	6	5	0.878858
chr12	55835433	55842966	55839199	ENSG00000123342.15	-	protein_coding	KNOWN	MMP19	9	9	0.889175
chr12	55870048	55872602	55871325	ENSG00000257966.1	-	processed_pseudogene	KNOWN	OLA1P3	1	1	0.619056
chr12	55870941	55871219	55871080	ENSG00000265119.2	-	misc_RNA	KNOWN	RN7SL676P	1	1	0.619056
chr12	55874678	55874841	55874759	ENSG00000207339.1	+	snRNA	KNOWN	RNU1-69P	1	1	0.619056
chr12	55900300	55900618	55900459	ENSG00000257569.1	+	processed_pseudogene	KNOWN	GSTP1P1	1	1	0.834717
chr12	55901413	55932618	55917015	ENSG00000170473.16	-	protein_coding	KNOWN	PYM1	7	4	0.815594
chr12	55927319	55954027	55940673	ENSG00000065357.19	+	protein_coding	KNOWN	DGKA	49	24	1.088694
chr12	55929170	55929729	55929449	ENSG00000273973.1	+	sense_intronic	KNOWN	RP11-973D8.5	1	1	0.764235
chr12	55954105	55973317	55963711	ENSG00000185664.14	-	protein_coding	KNOWN	PMEL	19	12	0.997962
chr12	55966769	55972784	55969776	ENSG00000123374.10	+	protein_coding	KNOWN	CDK2	12	8	0.953380
chr12	55966838	55967474	55967156	ENSG00000258554.1	-	antisense	KNOWN	RP11-973D8.4	1	2	1.024485
chr12	55973913	55996683	55985298	ENSG00000111540.15	+	protein_coding	KNOWN	RAB5B	11	6	0.888116
chr12	55980432	55981035	55980733	ENSG00000237493.3	-	processed_pseudogene	KNOWN	RP11-603J24.7	1	1	0.870913
chr12	55997180	56006641	56001910	ENSG00000139531.12	+	protein_coding	KNOWN	SUOX	17	6	0.929517
chr12	56007659	56038435	56023047	ENSG00000123411.14	+	protein_coding	KNOWN	IKZF4	13	12	0.866121
chr12	56010091	56010574	56010332	ENSG00000273890.1	-	antisense	KNOWN	RP11-603J24.21	1	1	0.747727
chr12	56029649	56041806	56035727	ENSG00000257449.1	-	antisense	KNOWN	RP11-603J24.4	1	2	1.118242
chr12	56041853	56044675	56043264	ENSG00000197728.9	+	protein_coding	KNOWN	RPS26	3	5	1.129225
chr12	56079857	56103505	56091681	ENSG00000065361.14	+	protein_coding	KNOWN	ERBB3	21	29	1.025560
chr12	56101331	56109289	56105310	ENSG00000257411.1	+	protein_coding	KNOWN	RP11-603J24.9	1	6	1.132007
chr12	56104319	56113907	56109113	ENSG00000170515.13	+	protein_coding	KNOWN	PA2G4	7	13	1.103678
chr12	56104614	56113905	56109259	ENSG00000257553.1	-	antisense	KNOWN	RP11-603J24.17	1	2	1.102788
chr12	56116586	56117943	56117264	ENSG00000229117.8	+	protein_coding	KNOWN	RPL41	6	4	1.062505
chr12	56118159	56127514	56122836	ENSG00000135482.6	+	protein_coding	KNOWN	ZC3H10	5	3	1.062505
chr12	56118250	56144671	56131460	ENSG00000139641.12	+	protein_coding	KNOWN	ESYT1	10	31	1.236643
chr12	56118968	56119939	56119453	ENSG00000258345.1	-	antisense	KNOWN	RP11-603J24.6	1	2	1.062505
chr12	56120033	56129619	56124826	ENSG00000258317.1	-	antisense	KNOWN	RP11-603J24.5	2	3	1.062505
chr12	56150796	56158220	56154508	ENSG00000257809.1	-	antisense	KNOWN	RP11-603J24.14	1	3	1.104376
chr12	56152256	56159647	56155951	ENSG00000196465.10	+	protein_coding	KNOWN	MYL6B	11	8	1.104376
chr12	56158161	56163496	56160828	ENSG00000092841.18	+	protein_coding	KNOWN	MYL6	21	7	1.104376
chr12	56162359	56190284	56176321	ENSG00000258199.1	-	sense_overlapping	KNOWN	RP11-977G19.5	1	2	1.374767
chr12	56162983	56189567	56176275	ENSG00000139613.11	-	protein_coding	KNOWN	SMARCC2	15	30	1.379374
chr12	56202175	56221933	56212054	ENSG00000181852.17	-	protein_coding	KNOWN	RNF41	12	9	1.155871
chr12	56222015	56229854	56225934	ENSG00000139579.12	+	protein_coding	KNOWN	NABP2	6	7	1.008525
chr12	56230049	56237846	56233947	ENSG00000139540.11	+	protein_coding	KNOWN	SLC39A5	11	13	1.296682
chr12	56237807	56258391	56248099	ENSG00000139645.9	-	protein_coding	KNOWN	ANKRD52	4	28	1.383825
chr12	56266858	56270966	56268912	ENSG00000135469.13	+	protein_coding	KNOWN	COQ10A	10	5	1.418838
chr12	56267793	56270104	56268948	ENSG00000258260.1	-	antisense	KNOWN	RP11-977G19.14	1	2	1.492750
chr12	56271699	56300392	56286045	ENSG00000062485.18	-	protein_coding	KNOWN	CS	33	12	1.074976
chr12	56285916	56316059	56300987	ENSG00000144785.8	-	protein_coding	KNOWN	RP11-977G19.10	3	9	1.021156
chr12	56300142	56314808	56307475	ENSG00000257303.1	+	antisense	KNOWN	RP11-977G19.11	2	3	1.010429
chr12	56308868	56309449	56309158	ENSG00000257740.1	+	antisense	KNOWN	RP11-977G19.12	1	2	0.993344
chr12	56309842	56316336	56313089	ENSG00000257727.5	-	protein_coding	KNOWN	CNPY2	12	6	1.044189
chr12	56316223	56334053	56325138	ENSG00000135473.14	-	protein_coding	KNOWN	PAN2	21	26	1.057781
chr12	56334174	56340410	56337292	ENSG00000110944.8	+	protein_coding	KNOWN	IL23A	3	5	1.099686
chr12	56341597	56360155	56350876	ENSG00000170581.13	-	protein_coding	KNOWN	STAT2	12	24	1.117717
chr12	56352387	56352450	56352418	ENSG00000252206.1	-	snRNA	KNOWN	RNU7-40P	1	1	1.132634
chr12	56360569	56362823	56361696	ENSG00000175336.9	-	protein_coding	KNOWN	APOF	1	2	1.132634
chr12	56376818	56377331	56377074	ENSG00000274823.1	-	processed_pseudogene	KNOWN	RP11-348M3.6	1	1	0.837891
chr12	56380361	56382711	56381536	ENSG00000259099.2	-	processed_pseudogene	KNOWN	RP11-348M3.2	1	4	0.837891
chr12	56411944	56413190	56412567	ENSG00000276272.1	-	lincRNA	KNOWN	RP11-121C6.5	1	1	0.583991
chr12	56413647	56414045	56413846	ENSG00000274569.1	-	processed_pseudogene	KNOWN	RP11-121C6.4	1	1	0.583991
chr12	56416373	56449403	56432888	ENSG00000111602.11	-	protein_coding	KNOWN	TIMELESS	5	29	0.835860
chr12	56449502	56469166	56459334	ENSG00000135517.6	-	protein_coding	KNOWN	MIP	2	4	0.885011
chr12	56468567	56479707	56474137	ENSG00000176422.12	+	protein_coding	KNOWN	SPRYD4	2	3	0.998966
chr12	56470944	56488414	56479679	ENSG00000135423.12	-	protein_coding	KNOWN	GLS2	17	18	1.016264
chr12	56511002	56512703	56511852	ENSG00000257576.1	+	processed_pseudogene	KNOWN	RP11-153M3.1	1	1	0.698510
chr12	56521929	56596196	56559062	ENSG00000076067.11	+	protein_coding	KNOWN	RBMS2	8	14	0.838022
chr12	56588518	56588621	56588569	ENSG00000201579.1	+	snRNA	KNOWN	RNU6-343P	1	1	0.981515
chr12	56595596	56636816	56616206	ENSG00000076108.11	-	protein_coding	KNOWN	BAZ2A	17	30	1.142446
chr12	56638175	56646068	56642121	ENSG00000110955.8	-	protein_coding	KNOWN	ATP5B	11	10	1.179455
chr12	56645027	56645101	56645064	ENSG00000207031.1	-	snoRNA	KNOWN	SNORD59A	1	1	1.179455
chr12	56663341	56688408	56675874	ENSG00000110958.15	-	protein_coding	KNOWN	PTGES3	7	9	0.687959
chr12	56670450	56670746	56670598	ENSG00000241217.3	-	misc_RNA	KNOWN	RN7SL809P	1	1	0.591563
chr12	56712428	56731628	56722028	ENSG00000196531.10	-	protein_coding	KNOWN	NACA	21	11	0.959357
chr12	56731596	56752373	56741984	ENSG00000198056.13	-	protein_coding	KNOWN	PRIM1	8	13	0.834996
chr12	56752161	56787790	56769975	ENSG00000025423.11	+	protein_coding	KNOWN	HSD17B6	10	6	0.710057
chr12	56822985	56874268	56848626	ENSG00000258679.1	+	transcribed_processed_pseudogene	KNOWN	RP11-74M13.4	2	2	0.457531
chr12	56840973	56841273	56841123	ENSG00000273536.1	-	processed_pseudogene	KNOWN	RP11-74M13.6	1	1	0.600783
chr12	56855694	56855886	56855790	ENSG00000258816.1	+	unprocessed_pseudogene	KNOWN	RP11-74M13.3	1	1	0.237533
chr12	56861375	56861508	56861441	ENSG00000212383.1	+	snoRNA	NOVEL	SNORA48	1	1	0.237533
chr12	56923154	56934405	56928779	ENSG00000170426.1	-	protein_coding	KNOWN	SDR9C7	1	4	0.562773
chr12	56941174	56941482	56941328	ENSG00000278400.1	-	processed_pseudogene	KNOWN	RP11-474N8.9	1	1	0.746138
chr12	56951431	56959374	56955402	ENSG00000139547.7	-	protein_coding	KNOWN	RDH16	2	4	0.584144
chr12	56981211	56985960	56983585	ENSG00000278399.1	-	unprocessed_pseudogene	KNOWN	RP11-74M13.5	1	4	0.566901
chr12	56994446	56998441	56996443	ENSG00000166856.2	+	protein_coding	KNOWN	GPR182	3	2	0.985620
chr12	56998834	57006446	57002640	ENSG00000166860.2	-	protein_coding	KNOWN	ZBTB39	1	2	0.985620
chr12	57010000	57028883	57019441	ENSG00000166863.11	-	protein_coding	KNOWN	TAC3	11	10	0.962950
chr12	57028517	57051198	57039857	ENSG00000166866.12	-	protein_coding	KNOWN	MYO1A	9	29	1.112679
chr12	57055643	57088063	57071853	ENSG00000166881.9	-	protein_coding	KNOWN	NEMP1	4	9	0.989215
chr12	57088894	57095476	57092185	ENSG00000166886.12	+	protein_coding	KNOWN	NAB2	5	7	1.312175
chr12	57095408	57132139	57113773	ENSG00000166888.10	-	protein_coding	KNOWN	STAT6	24	22	1.264832
chr12	57128493	57213351	57170922	ENSG00000123384.13	+	protein_coding	KNOWN	LRP1	12	89	1.525426
chr12	57144620	57147619	57146119	ENSG00000259125.1	-	antisense	KNOWN	LRP1-AS	2	2	1.565923
chr12	57194504	57194576	57194540	ENSG00000221365.1	+	miRNA	KNOWN	MIR1228	1	1	1.666045
chr12	57216795	57226449	57221622	ENSG00000182379.9	+	protein_coding	KNOWN	NXPH4	3	3	1.787411
chr12	57229327	57234935	57232131	ENSG00000182199.10	+	protein_coding	KNOWN	SHMT2	35	12	1.575326
chr12	57229498	57230198	57229848	ENSG00000276727.1	-	antisense	KNOWN	RP11-123K3.9	1	1	1.718910
chr12	57234903	57240715	57237809	ENSG00000185633.10	-	protein_coding	KNOWN	NDUFA4L2	7	5	1.546452
chr12	57243453	57251193	57247323	ENSG00000185482.7	-	protein_coding	KNOWN	STAC3	7	12	1.502559
chr12	57249609	57296484	57273046	ENSG00000258830.1	-	protein_coding	KNOWN	RP11-123K3.4	1	15	1.150512
chr12	57253762	57431005	57342383	ENSG00000179912.20	-	protein_coding	KNOWN	R3HDM2	15	24	0.798944
chr12	57415296	57415403	57415349	ENSG00000201198.1	+	snRNA	KNOWN	RNU6-879P	1	1	0.695333
chr12	57431116	57433935	57432525	ENSG00000258001.1	+	lincRNA	KNOWN	RP11-756H6.1	1	2	1.165992
chr12	57434760	57450828	57442794	ENSG00000175189.3	+	protein_coding	KNOWN	INHBC	1	2	1.174781
chr12	57452323	57459280	57455801	ENSG00000139269.2	+	protein_coding	KNOWN	INHBE	4	3	1.336348
chr12	57460135	57472262	57466198	ENSG00000111087.9	+	protein_coding	KNOWN	GLI1	8	12	1.338737
chr12	57472255	57488814	57480534	ENSG00000123329.17	-	protein_coding	KNOWN	ARHGAP9	24	21	1.349150
chr12	57475445	57517569	57496507	ENSG00000166986.12	+	protein_coding	KNOWN	MARS	35	23	1.135432
chr12	57512688	57512750	57512719	ENSG00000275657.1	+	miRNA	KNOWN	MIR6758	1	1	0.963477
chr12	57516588	57520517	57518552	ENSG00000175197.10	-	protein_coding	KNOWN	DDIT3	7	7	0.963477
chr12	57519163	57519259	57519211	ENSG00000208028.1	-	miRNA	KNOWN	MIR616	1	1	0.963477
chr12	57520710	57530148	57525429	ENSG00000166987.14	+	protein_coding	KNOWN	MBD6	14	13	0.967021
chr12	57530102	57547331	57538716	ENSG00000175203.15	-	protein_coding	KNOWN	DCTN2	24	16	1.187961
chr12	57549998	57586632	57568315	ENSG00000155980.11	+	protein_coding	KNOWN	KIF5A	3	29	0.913607
chr12	57591174	57603418	57597296	ENSG00000166908.17	+	protein_coding	KNOWN	PIP4K2C	8	11	0.833323
chr12	57604622	57609804	57607213	ENSG00000178498.15	+	protein_coding	KNOWN	DTX3	9	7	0.833323
chr12	57610180	57619379	57614779	ENSG00000240771.6	+	protein_coding	KNOWN	ARHGEF25	8	16	1.266708
chr12	57612118	57619638	57615878	ENSG00000224713.4	-	antisense	KNOWN	AC025165.8	4	3	1.266708
chr12	57619527	57626151	57622839	ENSG00000135502.16	+	protein_coding	KNOWN	SLC26A10	9	18	1.266708
chr12	57623410	57633355	57628382	ENSG00000135454.13	-	protein_coding	KNOWN	B4GALNT1	16	11	1.206235
chr12	57674665	57675250	57674957	ENSG00000242990.2	+	processed_pseudogene	KNOWN	RPL13AP23	1	1	0.608176
chr12	57693955	57721557	57707756	ENSG00000135506.15	+	protein_coding	KNOWN	OS9	23	15	0.671162
chr12	57694132	57721510	57707821	ENSG00000257342.1	-	antisense	KNOWN	RP11-571M6.7	1	2	0.671196
chr12	57723761	57742157	57732959	ENSG00000135439.11	-	protein_coding	KNOWN	AGAP2	4	19	0.953216
chr12	57726271	57728356	57727313	ENSG00000255737.2	+	antisense	KNOWN	AGAP2-AS1	1	2	0.682737
chr12	57738013	57750211	57744112	ENSG00000135452.9	+	protein_coding	KNOWN	TSPAN31	14	6	1.092309
chr12	57747727	57756013	57751870	ENSG00000135446.16	-	protein_coding	KNOWN	CDK4	15	8	1.105247
chr12	57755098	57760407	57757752	ENSG00000139266.5	+	protein_coding	KNOWN	MARCH9	3	4	1.110254
chr12	57762334	57768986	57765660	ENSG00000111012.9	-	protein_coding	KNOWN	CYP27B1	7	9	1.110254
chr12	57768471	57772793	57770632	ENSG00000037897.16	-	protein_coding	KNOWN	METTL1	8	6	1.090231
chr12	57771492	57782798	57777145	ENSG00000123427.15	+	protein_coding	KNOWN	METTL21B	6	4	1.079281
chr12	57773028	57787046	57780037	ENSG00000257921.5	+	protein_coding	KNOWN	RP11-571M6.15	3	6	1.079281
chr12	57782589	57808071	57795330	ENSG00000123297.17	+	protein_coding	KNOWN	TSFM	10	7	0.948099
chr12	57797376	57818704	57808040	ENSG00000135407.10	-	protein_coding	KNOWN	AVIL	10	20	0.885633
chr12	57803838	57804415	57804126	ENSG00000270039.1	+	lincRNA	KNOWN	RP11-571M6.17	1	1	0.894311
chr12	57806154	57806260	57806207	ENSG00000206749.1	-	snRNA	KNOWN	RNU6-1083P	1	1	0.894311
chr12	57814494	57814926	57814710	ENSG00000269903.1	+	lincRNA	KNOWN	RP11-571M6.18	1	1	0.873050
chr12	57819927	57846739	57833333	ENSG00000175215.9	-	protein_coding	KNOWN	CTDSP2	9	9	0.845521
chr12	57824609	57824692	57824650	ENSG00000207789.1	-	miRNA	KNOWN	MIR26A2	1	1	0.873050
chr12	57837092	57842745	57839918	ENSG00000257953.1	+	antisense	KNOWN	RP11-620J15.1	1	2	0.828957
chr12	57869835	57896482	57883158	ENSG00000245651.2	-	lincRNA	KNOWN	RP11-620J15.2	2	4	0.790617
chr12	57894232	57896846	57895539	ENSG00000273805.1	+	antisense	KNOWN	RP11-620J15.4	1	2	0.968003
chr12	57931528	57936175	57933851	ENSG00000257698.1	-	lincRNA	KNOWN	RP11-620J15.3	4	3	0.278693
chr12	57941541	57957269	57949405	ENSG00000166896.7	+	protein_coding	KNOWN	XRCC6BP1	4	6	0.244870
chr12	57967058	57968399	57967728	ENSG00000257159.1	+	processed_pseudogene	KNOWN	RP11-58A17.3	1	2	0.205521
chr12	57977965	57978277	57978121	ENSG00000222210.1	-	misc_RNA	KNOWN	RN7SKP65	1	1	-0.380379
chr12	57983795	57984761	57984278	ENSG00000257668.1	-	processed_pseudogene	KNOWN	RP11-58A17.2	1	1	-0.380379
chr12	58087892	58093362	58090627	ENSG00000257541.1	+	lincRNA	KNOWN	RP11-58A17.4	1	4	0.052654
chr12	58094914	58098013	58096463	ENSG00000279134.1	-	TEC	KNOWN	RP11-489P6.1	1	1	0.169160
chr12	58103907	58105935	58104921	ENSG00000279411.1	+	TEC	KNOWN	RP11-489P6.2	1	1	0.169160
chr12	58244378	58244865	58244621	ENSG00000241423.2	+	processed_pseudogene	KNOWN	RPL21P103	1	1	-0.192152
chr12	58394596	58395138	58394867	ENSG00000258133.1	+	processed_pseudogene	KNOWN	RP11-340M11.1	1	1	0.125544
chr12	58544124	58813060	58678592	ENSG00000258231.5	+	lincRNA	KNOWN	RP11-362K2.2	4	8	0.031556
chr12	58565960	58781747	58673853	ENSG00000257259.1	-	lincRNA	KNOWN	RP11-767I20.1	2	8	0.049543
chr12	58872149	58920522	58896335	ENSG00000139263.11	-	protein_coding	KNOWN	LRIG3	9	20	0.100403
chr12	58920639	59064238	58992438	ENSG00000257443.1	+	antisense	KNOWN	RP11-150C16.1	1	4	-0.109060
chr12	59020169	59020894	59020531	ENSG00000244390.2	+	processed_pseudogene	KNOWN	RPS6P22	1	1	0.149707
chr12	59052980	59054184	59053582	ENSG00000257288.1	-	processed_pseudogene	KNOWN	RP11-557F20.2	1	1	0.039841
chr12	59366218	59411171	59388694	ENSG00000258214.1	-	lincRNA	KNOWN	RP11-272B17.1	1	4	-0.327238
chr12	59369051	59369151	59369101	ENSG00000212599.1	-	snRNA	KNOWN	RNU6-279P	1	1	-0.539040
chr12	59450673	59450772	59450722	ENSG00000251931.1	-	snRNA	KNOWN	RNU6-871P	1	1	-0.066912
chr12	59523278	59524184	59523731	ENSG00000257230.1	-	lincRNA	KNOWN	RP11-272B17.2	1	3	-0.404946
chr12	59528059	59528141	59528100	ENSG00000266724.1	-	miRNA	NOVEL	AC108721.2	1	1	-0.404946
chr12	59528177	59528268	59528222	ENSG00000265430.1	-	miRNA	NOVEL	AC108721.1	1	1	-0.404946
chr12	59586793	59586943	59586868	ENSG00000202471.1	-	snRNA	KNOWN	RNU4-20P	1	1	-0.037291
chr12	59596067	59789855	59692961	ENSG00000118596.11	+	protein_coding	KNOWN	SLC16A7	16	7	-0.006853
chr12	59719698	59719944	59719821	ENSG00000257146.1	-	processed_pseudogene	KNOWN	RP11-813P10.1	1	1	0.080587
chr12	59812102	59812576	59812339	ENSG00000237176.4	+	processed_pseudogene	KNOWN	RP11-813P10.2	1	1	0.109803
chr12	60026771	60026857	60026814	ENSG00000280886.1	-	miRNA	NOVEL	AC091517.1	1	1	-0.074018
chr12	60092864	60096071	60094467	ENSG00000257294.2	+	lincRNA	KNOWN	RP11-316A16.1	1	2	-0.261645
chr12	60215994	60216384	60216189	ENSG00000258184.1	+	processed_pseudogene	KNOWN	RP11-335M9.1	1	1	-0.445036
chr12	60341824	60341941	60341882	ENSG00000252607.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.406127
chr12	60363822	60363935	60363878	ENSG00000251822.1	+	snoRNA	NOVEL	SNORA19	1	1	-0.618502
chr12	60418983	60419293	60419138	ENSG00000257865.1	+	processed_pseudogene	KNOWN	RP11-154D9.1	1	1	-0.632035
chr12	61231159	61232937	61232048	ENSG00000257308.1	-	processed_pseudogene	KNOWN	RP11-471N19.1	1	1	-0.541880
chr12	61600067	61600843	61600455	ENSG00000258336.2	-	processed_pseudogene	KNOWN	DUX4L52	1	1	-0.316093
chr12	61708259	62279150	61993704	ENSG00000198673.10	-	protein_coding	KNOWN	FAM19A2	16	9	-0.411386
chr12	61775923	61776400	61776161	ENSG00000242922.2	+	processed_pseudogene	KNOWN	RPL21P104	1	1	-0.908008
chr12	61879318	61880772	61880045	ENSG00000257528.1	+	processed_pseudogene	KNOWN	KRT8P19	1	1	-0.044510
chr12	62021570	62022174	62021872	ENSG00000213363.4	-	processed_pseudogene	KNOWN	RPS3P6	1	1	-0.406610
chr12	62139999	62145643	62142821	ENSG00000257880.1	-	sense_intronic	KNOWN	RP11-769N19.2	1	2	-0.510673
chr12	62234390	62235515	62234952	ENSG00000258316.1	-	processed_pseudogene	KNOWN	KLF17P1	1	1	-0.092433
chr12	62260338	62417431	62338884	ENSG00000135655.13	+	protein_coding	KNOWN	USP15	19	22	-0.204882
chr12	62260359	62260454	62260406	ENSG00000276811.1	+	miRNA	KNOWN	MIR6125	1	1	0.042067
chr12	62334091	62334197	62334144	ENSG00000200814.1	-	snRNA	KNOWN	RNU6-595P	1	1	-0.469124
chr12	62393607	62393880	62393743	ENSG00000275881.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.230698
chr12	62466817	62600479	62533648	ENSG00000061987.14	+	protein_coding	KNOWN	MON2	13	36	-0.014549
chr12	62482349	62484932	62483640	ENSG00000257568.1	-	antisense	KNOWN	RP11-863H1.1	1	2	-0.003005
chr12	62545582	62545679	62545630	ENSG00000202034.1	-	snRNA	KNOWN	RNU6-399P	1	1	-0.208762
chr12	62601751	62603690	62602720	ENSG00000221949.5	-	lincRNA	KNOWN	LINC01465	2	1	-0.009648
chr12	62602752	62622213	62612482	ENSG00000257354.2	+	lincRNA	KNOWN	RP11-631N16.2	1	2	0.069799
chr12	62603671	62603778	62603724	ENSG00000199179.2	+	miRNA	KNOWN	MIRLET7I	1	1	-0.009648
chr12	62603909	62604399	62604154	ENSG00000275180.1	+	lincRNA	KNOWN	RP11-631N16.4	1	1	-0.009648
chr12	62643982	62935037	62789509	ENSG00000111110.11	-	protein_coding	KNOWN	PPM1H	5	10	0.253995
chr12	62658823	62659225	62659024	ENSG00000241941.2	+	processed_pseudogene	KNOWN	RPL32P26	1	1	0.162002
chr12	62755227	62756233	62755730	ENSG00000213352.3	+	processed_pseudogene	KNOWN	GAPDHP44	1	1	0.400114
chr12	62850738	62850901	62850819	ENSG00000200296.1	-	snRNA	KNOWN	RNU1-83P	1	1	0.076395
chr12	62934507	62934607	62934557	ENSG00000275729.1	-	miRNA	NOVEL	AC078814.1	1	1	0.136661
chr12	62935701	62935802	62935751	ENSG00000252660.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.136661
chr12	62965325	62965969	62965647	ENSG00000139239.7	+	processed_pseudogene	KNOWN	RPL14P1	1	1	-0.107317
chr12	63002469	63002795	63002632	ENSG00000257779.1	+	processed_pseudogene	KNOWN	RP11-848D3.4	1	1	-0.090872
chr12	63003553	63006902	63005227	ENSG00000250517.2	+	transcribed_processed_pseudogene	KNOWN	LDHAL6CP	2	1	-0.090872
chr12	63004338	63006541	63005439	ENSG00000257235.1	-	lincRNA	KNOWN	RP11-848D3.5	1	3	-0.090872
chr12	63055275	63055765	63055520	ENSG00000257664.1	-	processed_pseudogene	KNOWN	RSL24D1P5	1	1	0.003058
chr12	63120335	63120416	63120375	ENSG00000276315.1	+	miRNA	NOVEL	AC135584.1	1	1	-0.352793
chr12	63142759	63150942	63146850	ENSG00000166148.3	-	protein_coding	KNOWN	AVPR1A	2	3	-0.379446
chr12	63151065	63154006	63152535	ENSG00000279444.1	+	TEC	KNOWN	RP11-715H19.2	1	3	-0.557822
chr12	63271404	63272336	63271870	ENSG00000257332.1	+	processed_pseudogene	KNOWN	HNRNPA1P69	1	1	-0.297050
chr12	63292625	63360037	63326331	ENSG00000258117.2	-	lincRNA	KNOWN	RP11-1022B3.1	1	2	-0.260136
chr12	63558913	63668939	63613926	ENSG00000177990.11	-	protein_coding	KNOWN	DPY19L2	9	22	-0.474536
chr12	63623788	63795718	63709753	ENSG00000249753.2	-	antisense	KNOWN	RP11-415I12.3	1	2	-0.296688
chr12	63651627	63651930	63651778	ENSG00000257005.1	+	processed_pseudogene	KNOWN	RP11-972L6.2	1	1	-0.366299
chr12	63682523	63724935	63703729	ENSG00000255583.2	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-415I12.2	2	4	-0.437870
chr12	63760358	63760612	63760485	ENSG00000240027.2	-	processed_pseudogene	KNOWN	RP11-415I12.1	1	1	-0.140669
chr12	63779803	63809558	63794680	ENSG00000118600.11	+	protein_coding	KNOWN	TMEM5	8	7	-0.373886
chr12	63808845	63822156	63815500	ENSG00000255850.1	-	antisense	KNOWN	TMEM5-AS1	1	4	-0.267447
chr12	63822021	63823895	63822958	ENSG00000255642.1	+	processed_pseudogene	KNOWN	PABPC1P4	1	1	-0.254566
chr12	63824238	63824294	63824266	ENSG00000275027.1	+	miRNA	NOVEL	AC084357.1	1	1	-0.254566
chr12	63830754	63830823	63830788	ENSG00000281594.1	-	miRNA	NOVEL	AC084357.2	1	1	0.083327
chr12	63844293	64162221	64003257	ENSG00000196935.8	+	protein_coding	KNOWN	SRGAP1	7	22	0.236275
chr12	63871739	63872044	63871891	ENSG00000242087.2	-	processed_pseudogene	KNOWN	RPL36AP41	1	1	0.211662
chr12	63878787	63879474	63879130	ENSG00000256571.1	+	sense_intronic	KNOWN	RP11-274J7.2	1	2	0.211662
chr12	63887379	63888598	63887988	ENSG00000256399.1	-	processed_pseudogene	KNOWN	RP11-274J7.3	1	1	0.211662
chr12	64032412	64032665	64032538	ENSG00000255780.1	+	processed_pseudogene	KNOWN	RP11-1029F8.1	1	1	0.020831
chr12	64038562	64097618	64068090	ENSG00000255886.1	-	antisense	KNOWN	RP11-196H14.2	1	3	0.187023
chr12	64108763	64120489	64114626	ENSG00000255817.1	-	antisense	KNOWN	RP11-196H14.4	1	2	0.176977
chr12	64146388	64147857	64147122	ENSG00000255629.1	-	antisense	KNOWN	RP11-196H14.3	1	2	0.380753
chr12	64186316	64222296	64204306	ENSG00000174206.12	-	protein_coding	KNOWN	C12orf66	5	4	0.249574
chr12	64204793	64204899	64204846	ENSG00000212298.1	+	snRNA	KNOWN	RNU6-1009P	1	1	0.218822
chr12	64222337	64397065	64309701	ENSG00000243024.6	+	transcribed_processed_pseudogene	KNOWN	RPS11P6	4	5	-0.053900
chr12	64228560	64228675	64228617	ENSG00000251788.1	-	snRNA	KNOWN	RNU5A-7P	1	1	0.353484
chr12	64264762	64391192	64327977	ENSG00000185306.12	-	protein_coding	KNOWN	C12orf56	7	13	-0.076775
chr12	64266413	64266766	64266589	ENSG00000256192.1	+	processed_pseudogene	KNOWN	RP11-290I21.2	1	1	-0.268303
chr12	64338178	64338797	64338487	ENSG00000256293.2	-	processed_pseudogene	KNOWN	RP11-114F3.2	1	1	-0.008172
chr12	64355762	64355865	64355813	ENSG00000238440.1	-	snoRNA	NOVEL	snoU13	1	1	-0.015537
chr12	64404350	64451127	64427738	ENSG00000184575.11	+	protein_coding	KNOWN	XPOT	6	25	0.218800
chr12	64442510	64443330	64442920	ENSG00000255566.1	-	processed_pseudogene	KNOWN	RP11-114F3.5	1	2	-0.035764
chr12	64451591	64452901	64452246	ENSG00000277895.1	-	antisense	KNOWN	RP11-114F3.4	1	1	0.419423
chr12	64451880	64502108	64476994	ENSG00000183735.9	+	protein_coding	KNOWN	TBK1	8	21	0.025906
chr12	64507166	64533638	64520402	ENSG00000256199.1	-	lincRNA	KNOWN	RP11-439H13.2	1	3	0.040114
chr12	64575665	64575741	64575703	ENSG00000223294.1	+	snoRNA	NOVEL	SNORD83	1	1	0.547293
chr12	64599078	64609459	64604268	ENSG00000256670.1	-	antisense	KNOWN	RP11-338E21.1	1	2	0.067045
chr12	64610513	64697567	64654040	ENSG00000153179.11	+	protein_coding	KNOWN	RASSF3	4	6	0.422426
chr12	64622509	64622605	64622557	ENSG00000207546.1	+	miRNA	KNOWN	MIR548C	1	1	0.487920
chr12	64628344	64629976	64629160	ENSG00000225195.2	+	sense_intronic	KNOWN	RP11-338E21.2	1	2	0.487920
chr12	64654060	64655019	64654539	ENSG00000256314.1	-	antisense	KNOWN	RP11-338E21.3	1	2	0.430161
chr12	64696191	64696550	64696370	ENSG00000280320.1	-	TEC	KNOWN	RP11-629N8.5	1	1	0.459297
chr12	64709458	64710513	64709985	ENSG00000280181.1	+	TEC	KNOWN	RP11-629N8.4	1	1	0.236169
chr12	64713445	64759447	64736446	ENSG00000135677.10	-	protein_coding	KNOWN	GNS	9	15	0.072423
chr12	64759521	64779318	64769419	ENSG00000215159.3	+	antisense	KNOWN	RP11-629N8.3	1	3	0.123751
chr12	64781193	64881032	64831112	ENSG00000111490.12	+	protein_coding	KNOWN	TBC1D30	6	13	-0.187706
chr12	64867956	64868699	64868327	ENSG00000243020.1	-	processed_pseudogene	KNOWN	RPL7P39	1	1	-0.125037
chr12	64883394	64977522	64930458	ENSG00000255693.1	+	lincRNA	KNOWN	RP11-766N7.3	2	5	-0.334826
chr12	64920845	64982524	64951684	ENSG00000248995.2	-	lincRNA	KNOWN	RP11-766N7.4	1	3	-0.384201
chr12	64939023	64939117	64939070	ENSG00000221564.1	+	snRNA	KNOWN	RNU6ATAC42P	1	1	-0.359704
chr12	65017468	65054124	65035796	ENSG00000198671.3	+	antisense	KNOWN	RP11-168J19.2	1	3	-0.303812
chr12	65050626	65121566	65086096	ENSG00000156076.9	-	protein_coding	KNOWN	WIF1	3	10	-0.314250
chr12	65095749	65095855	65095802	ENSG00000207099.1	+	snRNA	KNOWN	RNU6-166P	1	1	-0.480587
chr12	65134688	65135273	65134980	ENSG00000255700.2	+	processed_pseudogene	KNOWN	APOOP3	1	1	-0.346697
chr12	65169571	65248327	65208949	ENSG00000174106.2	+	protein_coding	KNOWN	LEMD3	6	13	-0.230145
chr12	65171262	65171917	65171589	ENSG00000276853.1	+	sense_intronic	KNOWN	RP11-305O6.4	1	1	-0.095378
chr12	65278643	65488244	65383443	ENSG00000174099.10	+	protein_coding	KNOWN	MSRB3	12	8	-0.025144
chr12	65281657	65286728	65284192	ENSG00000250280.2	+	sense_intronic	KNOWN	RP11-305O6.3	1	2	-0.110398
chr12	65418731	65420027	65419379	ENSG00000215208.3	-	processed_pseudogene	KNOWN	KRT18P60	1	1	0.132406
chr12	65466820	65642372	65554596	ENSG00000250748.6	-	lincRNA	KNOWN	RP11-230G5.2	10	5	0.155777
chr12	65559591	65560889	65560240	ENSG00000255866.1	+	lincRNA	KNOWN	RP11-221N13.2	1	2	0.361690
chr12	65602869	65612997	65607933	ENSG00000256268.1	+	lincRNA	KNOWN	RP11-221N13.3	2	3	-0.008327
chr12	65644334	65663299	65653816	ENSG00000256915.1	+	lincRNA	KNOWN	RP11-221N13.4	2	3	0.062833
chr12	65645992	65646462	65646227	ENSG00000213344.2	-	processed_pseudogene	KNOWN	PCNPP3	1	1	0.091992
chr12	65758020	65826997	65792508	ENSG00000241749.4	-	transcribed_processed_pseudogene	KNOWN	RPSAP52	3	2	0.078034
chr12	65824131	65966295	65895213	ENSG00000149948.13	+	protein_coding	KNOWN	HMGA2	11	5	0.111871
chr12	65830750	65831050	65830900	ENSG00000277945.1	+	sense_intronic	KNOWN	RP11-677M24.1	1	1	0.519102
chr12	65851340	65882167	65866753	ENSG00000197301.7	-	antisense	KNOWN	RP11-366L20.2	4	3	-0.010891
chr12	65858013	65858132	65858072	ENSG00000211577.1	+	miRNA	NOVEL	AC090673.1	1	1	0.012703
chr12	65934777	65948479	65941628	ENSG00000256083.1	-	antisense	KNOWN	RP11-366L20.3	1	3	0.200141
chr12	66023620	66023726	66023673	ENSG00000276878.1	-	miRNA	KNOWN	MIR6074	1	1	0.398095
chr12	66027725	66031066	66029395	ENSG00000256259.1	-	lincRNA	KNOWN	RP11-366L20.4	1	3	0.156181
chr12	66037235	66037714	66037474	ENSG00000213343.5	+	processed_pseudogene	KNOWN	RPL21P18	1	1	-0.359388
chr12	66066221	66066338	66066279	ENSG00000251857.1	+	rRNA	KNOWN	RNA5SP362	1	1	-0.110052
chr12	66091174	66091257	66091215	ENSG00000221807.3	-	miRNA	NOVEL	AC078927.1	1	1	-0.139334
chr12	66116555	66130768	66123661	ENSG00000139233.6	-	protein_coding	KNOWN	LLPH	2	3	0.087367
chr12	66123917	66169985	66146951	ENSG00000228144.2	-	protein_coding	KNOWN	RP11-745O10.4	1	8	-0.042464
chr12	66130751	66134449	66132600	ENSG00000239335.4	+	antisense	KNOWN	LLPH-AS1	1	2	0.171915
chr12	66135846	66170072	66152959	ENSG00000155957.17	-	protein_coding	KNOWN	TMBIM4	14	9	-0.101394
chr12	66137960	66169896	66153928	ENSG00000282031.1	-	protein_coding	KNOWN	TMBIM4	1	7	-0.119005
chr12	66188879	66254622	66221750	ENSG00000090376.8	+	protein_coding	KNOWN	IRAK3	3	12	-0.092823
chr12	66234079	66235234	66234656	ENSG00000225422.4	-	processed_pseudogene	KNOWN	RBMS1P1	1	1	-0.014923
chr12	66235556	66235622	66235589	ENSG00000266539.1	-	miRNA	NOVEL	AC078889.1	1	1	-0.014923
chr12	66251082	66251157	66251119	ENSG00000275058.1	+	miRNA	KNOWN	MIR6502	1	1	-0.051133
chr12	66251745	66257434	66254589	ENSG00000256072.1	-	antisense	KNOWN	RP11-335I12.2	1	4	-0.051133
chr12	66275940	66276651	66276295	ENSG00000256777.1	-	processed_pseudogene	KNOWN	PDCL3P7	1	1	-0.407315
chr12	66292683	66292987	66292835	ENSG00000222744.1	+	misc_RNA	KNOWN	RN7SKP166	1	1	-0.167875
chr12	66302545	66347645	66325095	ENSG00000127311.9	+	protein_coding	KNOWN	HELB	6	14	-0.139738
chr12	66347431	66804186	66575808	ENSG00000155974.11	-	protein_coding	KNOWN	GRIP1	17	25	-0.354642
chr12	66563524	66563694	66563609	ENSG00000256285.1	+	processed_pseudogene	KNOWN	OSBPL9P5	1	1	-0.377493
chr12	66563967	66569194	66566580	ENSG00000256420.1	-	processed_pseudogene	KNOWN	OSBPL9P4	1	2	-0.377493
chr12	66891876	67069162	66980519	ENSG00000256248.1	-	lincRNA	KNOWN	RP11-123O10.4	1	2	-0.394222
chr12	67035508	67096406	67065957	ENSG00000257083.5	-	lincRNA	KNOWN	RP11-123O10.3	3	5	-0.302147
chr12	67065018	67065278	67065148	ENSG00000279310.1	-	TEC	KNOWN	RP11-123O10.1	1	1	-0.120417
chr12	67131567	67132205	67131886	ENSG00000255976.1	-	processed_pseudogene	KNOWN	RAB11AP2	1	1	-0.482082
chr12	67265842	67266966	67266404	ENSG00000237766.2	-	processed_pseudogene	KNOWN	GGTA2P	1	1	-0.613438
chr12	67269281	67319951	67294616	ENSG00000111530.12	+	protein_coding	KNOWN	CAND1	8	15	-0.027014
chr12	67351436	67352039	67351737	ENSG00000256037.1	+	processed_pseudogene	KNOWN	MRPL40P1	1	1	-0.150369
chr12	67424272	67424986	67424629	ENSG00000256355.1	-	processed_pseudogene	KNOWN	NTAN1P3	1	1	0.232473
chr12	67440998	67442559	67441778	ENSG00000256172.1	-	lincRNA	KNOWN	RP11-473M14.3	1	2	-0.115521
chr12	67519829	67567126	67543477	ENSG00000203585.3	+	lincRNA	KNOWN	RP11-542B15.1	2	3	0.171819
chr12	67571197	67589987	67580592	ENSG00000256077.5	-	lincRNA	KNOWN	RP11-335O4.1	2	3	-0.127575
chr12	67648338	67665406	67656872	ENSG00000127334.10	+	protein_coding	KNOWN	DYRK2	6	3	0.377323
chr12	67658991	67670919	67664955	ENSG00000235872.2	-	antisense	KNOWN	RP11-335O4.3	1	3	0.376218
chr12	67709047	67729475	67719261	ENSG00000255970.1	-	lincRNA	KNOWN	RP11-43N5.1	1	5	0.025618
chr12	67753701	67753817	67753759	ENSG00000279505.1	+	TEC	KNOWN	RP11-43N5.2	1	1	0.147948
chr12	67929235	67970017	67949626	ENSG00000255772.5	+	lincRNA	KNOWN	LINC01479	2	3	-0.018458
chr12	67978107	67978387	67978247	ENSG00000256835.1	-	processed_pseudogene	KNOWN	GS1-410F4.5	1	1	0.016043
chr12	67989445	68234686	68112065	ENSG00000255733.5	+	antisense	KNOWN	IFNG-AS1	3	6	-0.214658
chr12	68001394	68001548	68001471	ENSG00000244432.2	-	processed_pseudogene	KNOWN	RPL39P28	1	1	-0.164107
chr12	68035767	68036853	68036310	ENSG00000236946.2	+	processed_pseudogene	KNOWN	HNRNPA1P70	1	1	-0.323046
chr12	68143318	68143690	68143504	ENSG00000256708.1	+	processed_pseudogene	KNOWN	RP11-444B24.2	1	1	-0.360076
chr12	68154768	68159747	68157257	ENSG00000111537.4	-	protein_coding	KNOWN	IFNG	1	4	-0.144076
chr12	68201351	68225821	68213586	ENSG00000111536.4	-	protein_coding	KNOWN	IL26	1	5	-0.112659
chr12	68248242	68253607	68250924	ENSG00000127318.10	-	protein_coding	KNOWN	IL22	2	6	-0.073313
chr12	68272443	68332381	68302412	ENSG00000111554.14	-	protein_coding	KNOWN	MDM1	15	14	-0.038940
chr12	68332888	68451663	68392275	ENSG00000251301.6	-	lincRNA	KNOWN	RP11-81H14.2	8	4	0.142176
chr12	68344664	68349959	68347311	ENSG00000256273.1	+	lincRNA	KNOWN	RP11-71J4.2	1	2	0.017138
chr12	68426331	68427737	68427034	ENSG00000273824.1	-	lincRNA	KNOWN	RP11-81H14.1	1	1	0.115324
chr12	68473741	68474902	68474321	ENSG00000256075.1	+	processed_pseudogene	KNOWN	RP11-81H14.3	1	1	0.226128
chr12	68487687	68487863	68487775	ENSG00000256917.1	+	processed_pseudogene	KNOWN	RP11-81H14.4	1	1	0.226128
chr12	68552995	68553882	68553438	ENSG00000240087.3	-	processed_pseudogene	KNOWN	RPSAP12	1	1	0.075782
chr12	68575858	68576136	68575997	ENSG00000274459.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.035408
chr12	68610839	68671901	68641370	ENSG00000127314.17	+	protein_coding	KNOWN	RAP1B	33	9	0.023641
chr12	68626870	68627187	68627028	ENSG00000234040.3	-	processed_pseudogene	KNOWN	RP11-254B13.4	1	1	-0.026886
chr12	68627234	68627375	68627304	ENSG00000206650.1	-	snoRNA	KNOWN	SNORA70G	1	1	-0.026886
chr12	68642519	68642993	68642756	ENSG00000234925.2	-	processed_pseudogene	KNOWN	ATP5HP4	1	1	0.036344
chr12	68674371	68687755	68681063	ENSG00000247363.2	-	lincRNA	KNOWN	RP11-637A17.2	3	3	-0.061814
chr12	68684595	68686308	68685451	ENSG00000241825.2	+	processed_pseudogene	KNOWN	RPL7P42	1	3	-0.061814
chr12	68686734	68745809	68716271	ENSG00000111581.9	+	protein_coding	KNOWN	NUP107	13	28	0.187843
chr12	68705634	68707066	68706350	ENSG00000233560.2	+	processed_pseudogene	KNOWN	KRT8P39	1	1	0.150885
chr12	68746106	68793964	68770035	ENSG00000175782.9	+	protein_coding	KNOWN	SLC35E3	5	5	0.149001
chr12	68805011	68805479	68805245	ENSG00000256678.1	-	processed_pseudogene	KNOWN	RP11-611O2.2	1	1	0.147335
chr12	68808172	68850686	68829429	ENSG00000135679.21	+	protein_coding	KNOWN	MDM2	36	12	0.196237
chr12	68828118	68828553	68828335	ENSG00000256325.1	+	antisense	KNOWN	RP11-611O2.1	1	2	0.347937
chr12	68841288	68843237	68842262	ENSG00000257181.1	-	antisense	KNOWN	RP11-611O2.5	1	2	0.037544
chr12	68841946	68842384	68842165	ENSG00000256664.1	+	processed_pseudogene	KNOWN	RP11-611O2.3	1	1	0.037544
chr12	68842197	68971570	68906883	ENSG00000135678.11	-	protein_coding	KNOWN	CPM	13	9	0.173845
chr12	68911921	68911982	68911951	ENSG00000252770.1	+	snRNA	KNOWN	RNU7-4P	1	1	-0.074519
chr12	68913804	68914022	68913913	ENSG00000257289.1	+	processed_pseudogene	KNOWN	RP11-611O2.6	1	1	-0.074519
chr12	68956406	68956486	68956446	ENSG00000280493.1	-	miRNA	NOVEL	AC133749.1	1	1	0.298443
chr12	68957377	68957677	68957527	ENSG00000257336.1	-	processed_pseudogene	KNOWN	PRELID2P1	1	1	0.298443
chr12	69212123	69224242	69218182	ENSG00000258140.1	+	lincRNA	KNOWN	RP11-324P9.1	1	4	0.276775
chr12	69239537	69274358	69256947	ENSG00000111605.16	+	protein_coding	KNOWN	CPSF6	7	11	-0.255650
chr12	69284397	69285485	69284941	ENSG00000257818.1	+	processed_pseudogene	KNOWN	C1GALT1P1	1	1	0.114712
chr12	69326574	69331882	69329228	ENSG00000274979.1	-	lincRNA	KNOWN	RP11-1143G9.5	1	1	-0.023542
chr12	69348341	69354234	69351287	ENSG00000090382.6	+	protein_coding	KNOWN	LYZ	3	4	-0.028476
chr12	69353493	69354225	69353859	ENSG00000257764.2	-	antisense	KNOWN	RP11-1143G9.4	1	2	-0.039652
chr12	69359703	69390796	69375249	ENSG00000127337.6	+	protein_coding	KNOWN	YEATS4	5	7	0.068435
chr12	69400903	69401200	69401051	ENSG00000266185.2	+	misc_RNA	KNOWN	RN7SL804P	1	1	0.016704
chr12	69422656	69422995	69422825	ENSG00000241765.2	+	processed_pseudogene	KNOWN	RPS26P45	1	1	0.211952
chr12	69449470	69460724	69455097	ENSG00000257507.1	+	lincRNA	KNOWN	RP11-956E11.1	1	3	0.298148
chr12	69470349	69579789	69525069	ENSG00000166225.8	+	protein_coding	KNOWN	FRS2	11	9	0.205830
chr12	69584722	69584823	69584772	ENSG00000264405.1	-	miRNA	KNOWN	MIR3913-2	1	1	0.176384
chr12	69585334	69601570	69593452	ENSG00000166226.12	+	protein_coding	KNOWN	CCT2	14	16	0.284598
chr12	69608564	69611162	69609863	ENSG00000198812.4	-	protein_coding	KNOWN	LRRC10	1	1	0.302806
chr12	69643360	69699476	69671418	ENSG00000127325.18	-	protein_coding	KNOWN	BEST3	12	10	-0.005688
chr12	69660034	69661429	69660731	ENSG00000279551.1	-	TEC	KNOWN	RP11-588G21.1	1	1	0.068013
chr12	69713633	69738568	69726100	ENSG00000247131.5	-	antisense	KNOWN	RP11-588G21.2	2	4	-0.336653
chr12	69738681	69823204	69780942	ENSG00000127328.21	+	protein_coding	KNOWN	RAB3IP	18	11	-0.420220
chr12	69801669	69855363	69828516	ENSG00000258052.1	+	protein_coding	KNOWN	AC025263.3	1	5	-0.229010
chr12	69825304	69959097	69892200	ENSG00000166268.10	+	protein_coding	KNOWN	MYRFL	5	25	-0.126275
chr12	69904033	70243360	70073696	ENSG00000257815.5	-	antisense	KNOWN	LINC01481	4	5	-0.299598
chr12	69946543	69947081	69946812	ENSG00000257241.1	-	antisense	KNOWN	RP11-611E13.3	1	2	-0.172385
chr12	70180338	70202004	70191171	ENSG00000257139.1	+	lincRNA	KNOWN	RP11-320P7.2	1	3	-0.434259
chr12	70219132	70221862	70220497	ENSG00000257613.1	-	lincRNA	KNOWN	LINC01481	1	2	-0.110052
chr12	70242994	70354993	70298993	ENSG00000111596.11	+	protein_coding	KNOWN	CNOT2	43	17	-0.267873
chr12	70321677	70324274	70322975	ENSG00000279530.1	-	protein_coding	KNOWN	AC092881.1	1	1	-0.237072
chr12	70366276	70434292	70400284	ENSG00000135643.4	+	protein_coding	KNOWN	KCNMB4	2	3	-0.055621
chr12	70443784	70443923	70443853	ENSG00000222405.1	-	snRNA	KNOWN	RNU4-65P	1	1	-0.076984
chr12	70446460	70447585	70447022	ENSG00000268721.1	-	processed_pseudogene	KNOWN	RP11-588H23.5	1	1	-0.076984
chr12	70468080	70543040	70505560	ENSG00000258168.5	+	antisense	KNOWN	RP11-588H23.3	8	9	0.008942
chr12	70515866	70637440	70576653	ENSG00000127329.14	-	protein_coding	KNOWN	PTPRB	12	34	-0.073141
chr12	70570969	70571440	70571204	ENSG00000277247.1	+	antisense	KNOWN	RP11-785D18.3	1	1	-0.097486
chr12	70638073	70920843	70779458	ENSG00000153233.12	-	protein_coding	KNOWN	PTPRR	11	14	-0.354641
chr12	70671918	70672856	70672387	ENSG00000257302.1	+	processed_pseudogene	KNOWN	FAHD2P1	1	1	-0.126354
chr12	70906917	70907018	70906967	ENSG00000207387.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.562680
chr12	71007773	71032083	71019928	ENSG00000257265.1	-	lincRNA	KNOWN	CTD-2021H9.1	1	4	-0.433323
chr12	71034122	71104526	71069324	ENSG00000257454.1	-	lincRNA	KNOWN	CTD-2021H9.2	1	5	-0.468192
chr12	71047402	71118247	71082824	ENSG00000258053.1	-	lincRNA	KNOWN	CTD-2021H9.3	1	3	-0.547854
chr12	71125085	71441898	71283491	ENSG00000127324.8	-	protein_coding	KNOWN	TSPAN8	7	12	-0.457018
chr12	71439770	71586310	71513040	ENSG00000139292.12	+	protein_coding	KNOWN	LGR5	6	20	-0.279499
chr12	71448405	71448850	71448627	ENSG00000277223.1	+	sense_intronic	KNOWN	RP11-578B16.1	1	1	0.057435
chr12	71582293	71583852	71583072	ENSG00000257761.1	-	antisense	KNOWN	RP11-186F10.2	1	3	-0.677228
chr12	71609472	71667725	71638598	ENSG00000133858.15	-	protein_coding	KNOWN	ZFC3H1	12	35	-0.082789
chr12	71639355	71639483	71639419	ENSG00000212461.1	+	snoRNA	NOVEL	SNORA17	1	1	-0.337176
chr12	71663009	71680639	71671824	ENSG00000173451.6	+	protein_coding	KNOWN	THAP2	4	3	-0.018529
chr12	71674204	71698968	71686586	ENSG00000258064.1	+	protein_coding	KNOWN	RP11-293I14.2	1	5	-0.018125
chr12	71686087	71705046	71695566	ENSG00000139291.13	+	protein_coding	KNOWN	TMEM19	6	6	-0.018967
chr12	71709171	71710374	71709772	ENSG00000257515.1	-	lincRNA	KNOWN	RP11-498M15.1	1	2	-0.001183
chr12	71754874	71800285	71777579	ENSG00000080371.5	+	protein_coding	KNOWN	RAB21	4	7	0.033794
chr12	71793855	71799627	71796741	ENSG00000257410.1	-	lincRNA	KNOWN	RP11-2H8.2	1	2	-0.143496
chr12	71835034	71835396	71835215	ENSG00000257991.1	-	processed_pseudogene	KNOWN	RP11-2H8.3	1	1	0.143831
chr12	71839707	71927248	71883477	ENSG00000121749.15	+	protein_coding	KNOWN	TBC1D15	17	18	-0.030237
chr12	71849228	71850428	71849828	ENSG00000257802.1	-	processed_pseudogene	KNOWN	RP11-2H8.4	1	1	0.145527
chr12	71938846	72186618	72062732	ENSG00000139287.12	+	protein_coding	KNOWN	TPH2	6	11	-0.163693
chr12	72046149	72057377	72051763	ENSG00000258115.1	-	antisense	KNOWN	RP11-89M22.3	1	5	-0.114727
chr12	72087266	72670757	72379011	ENSG00000072657.8	+	protein_coding	KNOWN	TRHDE	7	19	-0.310600
chr12	72253508	72274907	72264207	ENSG00000236333.3	-	processed_transcript	KNOWN	TRHDE-AS1	4	4	-0.255438
chr12	72431722	72432075	72431898	ENSG00000257287.1	-	processed_pseudogene	KNOWN	RP11-98E6.1	1	1	-0.420070
chr12	72610678	72611316	72610997	ENSG00000257723.1	+	processed_pseudogene	KNOWN	CHCHD3P2	1	1	-0.331816
chr12	72727923	72728844	72728383	ENSG00000258235.1	-	lincRNA	KNOWN	RP11-12K6.2	1	2	-0.242427
chr12	72790451	72790645	72790548	ENSG00000216084.1	-	miRNA	NOVEL	AC131213.1	1	1	-0.464402
chr12	73115957	73143858	73129907	ENSG00000258294.5	-	processed_transcript	KNOWN	RP11-314D7.1	4	4	-0.597143
chr12	73159190	73208317	73183753	ENSG00000258123.1	+	lincRNA	KNOWN	RP11-314D7.2	1	4	-0.461554
chr12	73203815	73206835	73205325	ENSG00000257682.1	-	lincRNA	KNOWN	RP11-314D7.3	1	2	-0.510353
chr12	73648666	73649039	73648852	ENSG00000243164.1	+	processed_pseudogene	KNOWN	RP11-166B14.1	1	1	-0.995471
chr12	73679188	73679296	73679242	ENSG00000252415.1	-	snRNA	KNOWN	RNU6-1012P	1	1	-0.163567
chr12	73760689	73798727	73779708	ENSG00000257750.1	+	lincRNA	KNOWN	RP11-295G12.1	1	5	-0.603120
chr12	73764279	73764413	73764346	ENSG00000201809.1	-	snoRNA	NOVEL	U8	1	1	-0.963150
chr12	73881987	73882073	73882030	ENSG00000276652.1	+	miRNA	NOVEL	AC136188.1	1	1	-0.564054
chr12	73906940	73919337	73913138	ENSG00000257587.1	+	lincRNA	KNOWN	RP11-711C17.1	1	3	-0.665022
chr12	74017775	74017856	74017815	ENSG00000264155.1	-	miRNA	NOVEL	AC090015.1	1	1	-0.339959
chr12	74039086	74045828	74042457	ENSG00000258332.1	+	lincRNA	KNOWN	RP11-711C17.2	1	2	-0.484200
chr12	74133166	74402535	74267850	ENSG00000251138.6	-	lincRNA	KNOWN	RP11-81H3.2	5	7	-0.593167
chr12	74170445	74171830	74171137	ENSG00000258320.1	+	processed_pseudogene	KNOWN	RP11-274M17.1	1	1	-0.237316
chr12	74248637	74283669	74266153	ENSG00000257183.1	-	lincRNA	KNOWN	RP11-274M17.3	1	4	-0.474643
chr12	74274952	74275231	74275091	ENSG00000257113.1	+	processed_pseudogene	KNOWN	RP11-274M17.2	1	1	-0.189190
chr12	74292324	74293096	74292710	ENSG00000257364.1	+	processed_pseudogene	KNOWN	VENTXP3	1	1	-0.405508
chr12	74537827	74545430	74541628	ENSG00000253719.3	+	protein_coding	KNOWN	ATXN7L3B	1	1	-0.178366
chr12	74538145	74538633	74538389	ENSG00000257386.1	-	antisense	KNOWN	RP11-56G10.2	1	2	-0.178366
chr12	74656561	74656860	74656710	ENSG00000257323.1	+	processed_pseudogene	KNOWN	RP11-361A23.1	1	1	-0.473988
chr12	74663774	74664141	74663957	ENSG00000188646.6	-	processed_pseudogene	KNOWN	RP11-361A23.2	1	1	-0.473988
chr12	74728038	74728851	74728444	ENSG00000257998.1	-	processed_pseudogene	KNOWN	RP11-361A23.3	1	1	-0.544501
chr12	75020969	75044793	75032881	ENSG00000257434.1	+	antisense	KNOWN	RP11-81K13.1	3	3	-0.348177
chr12	75040077	75209868	75124972	ENSG00000166006.12	-	protein_coding	KNOWN	KCNC2	9	6	-0.627613
chr12	75234740	75298508	75266624	ENSG00000254451.2	+	antisense	KNOWN	RP11-560G2.1	3	5	-0.365303
chr12	75257635	75258634	75258134	ENSG00000258112.1	-	processed_pseudogene	KNOWN	CCNG2P1	1	1	-0.659621
chr12	75275979	75390928	75333453	ENSG00000180881.19	-	protein_coding	KNOWN	CAPS2	14	18	-0.305337
chr12	75305452	75306357	75305904	ENSG00000257823.1	+	processed_pseudogene	KNOWN	RP11-560G2.2	1	1	-0.251963
chr12	75333798	75334486	75334142	ENSG00000273987.1	-	sense_intronic	KNOWN	RP11-585P4.6	1	1	-0.344648
chr12	75334639	75370560	75352599	ENSG00000173401.9	+	protein_coding	KNOWN	GLIPR1L1	4	6	-0.344050
chr12	75391070	75432688	75411879	ENSG00000180481.10	+	protein_coding	KNOWN	GLIPR1L2	4	7	-0.357167
chr12	75480680	75503853	75492266	ENSG00000139278.9	+	protein_coding	KNOWN	GLIPR1	4	6	-0.247473
chr12	75483454	75489820	75486637	ENSG00000257497.2	-	antisense	KNOWN	RP11-585P4.5	1	2	-0.284863
chr12	75490861	75511636	75501248	ENSG00000111615.12	-	protein_coding	KNOWN	KRR1	6	11	-0.217092
chr12	75563202	75984015	75773608	ENSG00000258077.2	-	lincRNA	KNOWN	RP11-114H23.1	2	5	0.076984
chr12	75600047	75601551	75600799	ENSG00000257777.1	+	processed_pseudogene	KNOWN	RP11-25J3.2	1	1	-0.016785
chr12	75688794	75689096	75688945	ENSG00000258245.1	-	processed_pseudogene	KNOWN	RP11-114H23.3	1	1	-0.143386
chr12	75689152	75689304	75689228	ENSG00000251893.2	-	snoRNA	NOVEL	SNORA70	1	1	-0.143386
chr12	75694010	75698816	75696413	ENSG00000258088.1	-	lincRNA	KNOWN	RP11-114H23.2	1	4	0.035089
chr12	75724453	75724541	75724497	ENSG00000264062.1	-	miRNA	NOVEL	AC131012.1	1	1	0.012557
chr12	75926213	75926467	75926340	ENSG00000258091.1	+	processed_pseudogene	KNOWN	RP11-290L1.6	1	1	-0.054557
chr12	75957833	75958130	75957981	ENSG00000243420.3	-	misc_RNA	KNOWN	RN7SL734P	1	1	0.330931
chr12	75964440	75967062	75965751	ENSG00000257329.1	+	lincRNA	KNOWN	RP11-290L1.5	1	3	0.330931
chr12	75964799	75964995	75964897	ENSG00000198923.4	+	processed_pseudogene	KNOWN	RP11-290L1.7	1	1	0.330931
chr12	76025447	76033932	76029689	ENSG00000139289.13	-	protein_coding	KNOWN	PHLDA1	3	2	0.197741
chr12	76030494	76031378	76030936	ENSG00000257453.1	+	antisense	KNOWN	RP11-290L1.3	1	2	0.218904
chr12	76032658	76033897	76033277	ENSG00000257839.1	+	antisense	KNOWN	RP11-290L1.2	1	2	0.218904
chr12	76036587	76085033	76060810	ENSG00000187109.13	-	protein_coding	KNOWN	NAP1L1	27	16	0.030516
chr12	76057538	76058115	76057826	ENSG00000257941.1	+	processed_pseudogene	KNOWN	RP11-290L1.4	1	1	0.055696
chr12	76115711	76116100	76115905	ENSG00000258304.1	+	processed_pseudogene	KNOWN	RP11-453D16.1	1	1	0.244762
chr12	76137425	76138610	76138017	ENSG00000257872.1	+	processed_pseudogene	KNOWN	RP11-453D16.2	1	1	-0.035013
chr12	76139567	76139671	76139619	ENSG00000252858.1	+	snRNA	KNOWN	RNU6-1271P	1	1	-0.035013
chr12	76259839	76305131	76282485	ENSG00000257219.5	+	lincRNA	KNOWN	RP11-54A9.1	2	4	0.341632
chr12	76315751	76316048	76315899	ENSG00000223273.1	+	misc_RNA	KNOWN	RN7SKP172	1	1	0.382963
chr12	76344474	76348442	76346458	ENSG00000179941.6	-	protein_coding	KNOWN	BBS10	1	2	0.172365
chr12	76351797	76559809	76455803	ENSG00000091039.16	-	protein_coding	KNOWN	OSBPL8	18	26	-0.058748
chr12	76562294	76615567	76588930	ENSG00000257526.2	+	lincRNA	KNOWN	RP11-20E24.1	1	3	-0.095181
chr12	76599671	76600470	76600070	ENSG00000213272.5	+	processed_pseudogene	KNOWN	RP11-613M5.1	1	1	-0.124820
chr12	76619386	76620043	76619714	ENSG00000271142.1	+	processed_pseudogene	KNOWN	YWHAQP7	1	1	-0.282404
chr12	76660405	76660884	76660644	ENSG00000243071.1	+	processed_pseudogene	KNOWN	RP11-613M5.2	1	1	0.091992
chr12	76721534	76722286	76721910	ENSG00000241045.1	+	processed_pseudogene	KNOWN	RPL7P43	1	1	0.233238
chr12	76757191	76757914	76757552	ENSG00000258090.1	+	processed_pseudogene	KNOWN	RP11-734E19.1	1	1	0.025266
chr12	76763588	76853696	76808642	ENSG00000186908.14	+	protein_coding	KNOWN	ZDHHC17	16	17	-0.106922
chr12	76858715	76879060	76868887	ENSG00000175183.9	-	protein_coding	KNOWN	CSRP2	7	7	0.156451
chr12	76878193	76880352	76879272	ENSG00000257910.1	+	antisense	KNOWN	RP11-461F16.3	1	2	0.197235
chr12	76984079	76984669	76984374	ENSG00000257199.2	-	processed_pseudogene	KNOWN	RP11-669B18.1	1	1	-0.250240
chr12	77021247	77065580	77043413	ENSG00000165891.15	-	protein_coding	KNOWN	E2F7	7	13	-0.148859
chr12	77219603	77228693	77224148	ENSG00000257677.1	-	lincRNA	KNOWN	RP1-81P11.1	1	2	-0.258107
chr12	77282752	77282850	77282801	ENSG00000278578.1	-	miRNA	NOVEL	AC068797.1	1	1	-0.396627
chr12	77324641	77572275	77448458	ENSG00000231121.3	+	lincRNA	KNOWN	RP1-34H18.1	1	2	-0.514554
chr12	77379820	77390864	77385342	ENSG00000257835.1	+	lincRNA	KNOWN	RP1-97G4.1	1	3	-0.581849
chr12	77775783	77783576	77779679	ENSG00000258066.1	+	lincRNA	KNOWN	RP11-781A6.1	1	2	-0.136277
chr12	77830905	78213008	78021956	ENSG00000067798.13	+	protein_coding	KNOWN	NAV3	14	40	-0.300282
chr12	78052181	78091737	78071959	ENSG00000258225.1	-	antisense	KNOWN	RP11-136F16.1	1	4	-0.182699
chr12	78130337	78131004	78130670	ENSG00000257220.1	-	processed_pseudogene	KNOWN	RP11-136F16.2	1	1	-0.295738
chr12	78326680	78359746	78343213	ENSG00000258220.1	-	lincRNA	KNOWN	RP11-38F22.1	1	2	-0.694507
chr12	78352519	78483019	78417769	ENSG00000258084.5	+	lincRNA	KNOWN	RP11-754N21.1	2	6	-0.361000
chr12	78426826	78442952	78434889	ENSG00000257879.1	-	lincRNA	KNOWN	RP11-90C1.1	1	3	-0.586925
chr12	78448995	78540675	78494835	ENSG00000257165.5	-	lincRNA	KNOWN	RP11-171L9.1	2	3	-0.230312
chr12	78793526	78794114	78793820	ENSG00000257564.1	-	processed_pseudogene	KNOWN	RP11-123M21.2	1	1	-0.319639
chr12	78804348	78808499	78806423	ENSG00000257948.1	+	lincRNA	KNOWN	RP11-123M21.1	1	3	-0.319639
chr12	78863993	79452008	79158000	ENSG00000067715.13	+	protein_coding	KNOWN	SYT1	12	12	-0.489177
chr12	78960258	79045644	79002951	ENSG00000257191.1	-	antisense	KNOWN	RP11-390N6.1	1	4	-0.774008
chr12	79341205	79503396	79422300	ENSG00000257894.2	-	lincRNA	KNOWN	RP1-78O14.1	3	2	-0.128844
chr12	79348319	79348391	79348355	ENSG00000238890.1	+	miRNA	NOVEL	AC078917.1	1	1	-0.057904
chr12	79419257	79419321	79419289	ENSG00000221788.1	+	miRNA	KNOWN	MIR1252	1	1	0.065192
chr12	79462464	79462550	79462507	ENSG00000266390.1	-	miRNA	NOVEL	AC027288.2	1	1	-0.134601
chr12	79481048	79481140	79481094	ENSG00000263757.1	-	miRNA	NOVEL	AC027288.1	1	1	0.168807
chr12	79500119	79500687	79500403	ENSG00000257604.1	-	processed_pseudogene	KNOWN	RP11-359M6.2	1	2	0.279195
chr12	79540203	79550535	79545369	ENSG00000257474.5	+	lincRNA	KNOWN	RP11-359M6.1	3	3	0.295664
chr12	79558782	79559166	79558974	ENSG00000257956.1	+	processed_pseudogene	KNOWN	NOP56P3	1	1	0.400437
chr12	79574979	79691097	79633038	ENSG00000177425.10	-	protein_coding	KNOWN	PAWR	11	7	-0.032056
chr12	79690144	79778451	79734297	ENSG00000258048.1	+	lincRNA	KNOWN	RP11-530C5.1	1	2	0.032304
chr12	79773563	79935460	79854511	ENSG00000058272.16	-	protein_coding	KNOWN	PPP1R12A	22	26	-0.090510
chr12	79818784	79819465	79819124	ENSG00000277130.1	-	sense_intronic	KNOWN	RP11-530C5.4	1	1	-0.408437
chr12	79823778	79825496	79824637	ENSG00000258044.1	+	antisense	KNOWN	RP11-530C5.2	1	2	-0.408437
chr12	79878305	79878419	79878362	ENSG00000201942.1	-	rRNA	KNOWN	RNA5SP363	1	1	-0.197515
chr12	79934901	79942712	79938806	ENSG00000257557.2	+	antisense	KNOWN	RP11-84G21.1	1	3	0.046763
chr12	79989014	79989218	79989116	ENSG00000271496.1	-	processed_pseudogene	KNOWN	SNRPGP20	1	1	-0.105454
chr12	80028893	80029631	80029262	ENSG00000239473.1	+	processed_pseudogene	KNOWN	RPL7P38	1	1	-0.231898
chr12	80068691	80068757	80068724	ENSG00000238842.1	-	snRNA	KNOWN	RNU7-106P	1	1	0.179455
chr12	80102899	80103333	80103116	ENSG00000230291.5	-	processed_pseudogene	KNOWN	RP11-244J10.1	1	1	-0.030691
chr12	80209453	80379090	80294271	ENSG00000165899.10	+	protein_coding	KNOWN	OTOGL	6	58	-0.283926
chr12	80343515	80343792	80343653	ENSG00000222880.1	-	misc_RNA	KNOWN	RN7SKP261	1	1	-0.152161
chr12	80402178	80680234	80541206	ENSG00000139304.12	+	protein_coding	KNOWN	PTPRQ	10	45	-0.303298
chr12	80561017	80561560	80561288	ENSG00000257786.1	-	processed_pseudogene	KNOWN	AKIRIN1P1	1	1	-0.404946
chr12	80583683	80593701	80588692	ENSG00000257429.1	-	antisense	KNOWN	RP11-272K23.3	1	3	-0.024493
chr12	80707498	80709474	80708486	ENSG00000111046.3	+	protein_coding	KNOWN	MYF6	1	3	-0.557321
chr12	80716912	80719673	80718292	ENSG00000111049.3	+	protein_coding	KNOWN	MYF5	1	3	-0.117727
chr12	80763154	80770717	80766935	ENSG00000257741.5	+	lincRNA	KNOWN	LINC01490	2	5	-0.555973
chr12	80792520	80937925	80865222	ENSG00000111052.7	-	protein_coding	KNOWN	LIN7A	4	7	-0.251406
chr12	80832533	80832629	80832581	ENSG00000207763.1	-	miRNA	KNOWN	MIR617	1	1	-0.401656
chr12	80860955	80861508	80861231	ENSG00000258215.1	-	processed_pseudogene	KNOWN	RP11-299A16.1	1	1	-0.397212
chr12	80935736	80935833	80935784	ENSG00000208022.1	-	miRNA	KNOWN	MIR618	1	1	-0.182183
chr12	80936414	81261205	81098809	ENSG00000111058.7	+	protein_coding	KNOWN	ACSS3	8	16	-0.537824
chr12	81094375	81125845	81110110	ENSG00000258026.1	-	antisense	KNOWN	RP11-543H12.1	1	5	-0.676992
chr12	81158388	81158461	81158424	ENSG00000265227.1	+	miRNA	KNOWN	MIR4699	1	1	-0.739885
chr12	81257975	81759553	81508764	ENSG00000139220.16	-	protein_coding	KNOWN	PPFIA2	28	33	-0.660744
chr12	81270675	81312422	81291548	ENSG00000257467.5	+	lincRNA	KNOWN	RP11-121G22.3	10	7	-0.631882
chr12	81378042	81472954	81425498	ENSG00000258162.2	+	antisense	KNOWN	RP11-315E17.1	2	4	-0.653485
chr12	81545326	81546450	81545888	ENSG00000258375.2	-	processed_pseudogene	KNOWN	RP11-617J18.1	1	1	-0.756005
chr12	81868368	81869046	81868707	ENSG00000257609.1	+	processed_pseudogene	KNOWN	RP11-275O18.1	1	1	-0.831773
chr12	81953719	81993133	81973426	ENSG00000257747.1	+	lincRNA	KNOWN	RP11-362A1.1	1	3	-0.435602
chr12	81998632	81998962	81998797	ENSG00000258193.1	+	processed_pseudogene	KNOWN	RP11-362A1.2	1	1	-0.498024
chr12	82223681	82358805	82291243	ENSG00000133773.11	-	protein_coding	KNOWN	CCDC59	7	4	-0.595576
chr12	82264943	82265044	82264993	ENSG00000221260.2	+	miRNA	NOVEL	AC083810.1	1	1	-0.533613
chr12	82342596	82342710	82342653	ENSG00000221121.1	-	miRNA	NOVEL	AC083811.1	1	1	-0.346450
chr12	82358497	82479236	82418866	ENSG00000127720.7	+	protein_coding	KNOWN	METTL25	11	12	-0.451685
chr12	82468456	82468948	82468702	ENSG00000257875.1	+	processed_pseudogene	KNOWN	RP11-263K4.1	1	1	-0.602200
chr12	82481118	82497560	82489339	ENSG00000258170.1	-	lincRNA	KNOWN	RP11-263K4.5	1	3	-0.534976
chr12	82505211	82506188	82505699	ENSG00000257837.1	-	lincRNA	KNOWN	RP11-263K4.4	1	2	-0.339959
chr12	82512677	82515817	82514247	ENSG00000257431.1	+	lincRNA	KNOWN	RP11-263K4.3	1	1	-0.468309
chr12	82686880	83134870	82910875	ENSG00000179104.8	+	protein_coding	KNOWN	TMTC2	5	13	-0.268419
chr12	83021890	83021992	83021941	ENSG00000252220.1	+	snRNA	KNOWN	RNU6-977P	1	1	-0.373672
chr12	83151331	83152190	83151760	ENSG00000213270.5	+	processed_pseudogene	KNOWN	RPL6P25	1	1	-0.293792
chr12	83171590	83172740	83172165	ENSG00000258338.1	+	lincRNA	KNOWN	RP11-87P13.2	1	2	-0.834842
chr12	83661009	83661719	83661364	ENSG00000257124.2	-	lincRNA	KNOWN	RP11-384P14.1	1	2	-0.157986
chr12	84183324	84183448	84183386	ENSG00000221148.1	-	snoRNA	NOVEL	SNORA3	1	1	-0.094886
chr12	84271340	84294562	84282951	ENSG00000257729.1	+	lincRNA	KNOWN	RP11-788H18.1	2	3	-0.334426
chr12	84448625	84449878	84449251	ENSG00000258358.2	-	processed_pseudogene	KNOWN	RP11-228G3.1	1	1	-0.543011
chr12	84671598	84672026	84671812	ENSG00000257296.1	+	processed_pseudogene	KNOWN	RP11-701B6.1	1	1	-0.417373
chr12	84859488	84913615	84886551	ENSG00000072041.16	-	protein_coding	KNOWN	SLC6A15	11	12	-0.436282
chr12	84939524	84939668	84939596	ENSG00000258073.1	-	processed_pseudogene	KNOWN	RP11-1079J22.1	1	1	-0.349198
chr12	85014311	85036277	85025294	ENSG00000231738.10	-	protein_coding	KNOWN	TSPAN19	8	9	-0.618177
chr12	85036314	85263224	85149769	ENSG00000133640.18	+	protein_coding	KNOWN	LRRIQ1	7	27	-0.622694
chr12	85263544	85264457	85264000	ENSG00000269916.1	+	lincRNA	KNOWN	RP11-193M21.1	1	1	-1.308546
chr12	85280107	85301784	85290945	ENSG00000180318.3	+	protein_coding	KNOWN	ALX1	1	4	-0.672434
chr12	85318060	85342912	85330486	ENSG00000258815.1	+	lincRNA	KNOWN	RP11-408B11.2	1	3	-0.459076
chr12	85567878	85568239	85568058	ENSG00000257855.1	+	processed_pseudogene	KNOWN	RP11-629O19.1	1	1	-0.786018
chr12	85647253	85647320	85647286	ENSG00000263449.1	-	miRNA	NOVEL	AC021887.1	1	1	-0.212265
chr12	85781892	85782444	85782168	ENSG00000258206.1	-	processed_pseudogene	KNOWN	RP13-619I2.2	1	1	-0.706049
chr12	85800697	85836570	85818633	ENSG00000198774.4	-	protein_coding	KNOWN	RASSF9	1	2	-0.826711
chr12	85874295	85882992	85878643	ENSG00000133636.10	+	protein_coding	KNOWN	NTS	3	4	-0.554371
chr12	85879928	85880014	85879971	ENSG00000266016.2	-	miRNA	NOVEL	AC016993.1	1	1	-0.554371
chr12	85955666	86838904	86397285	ENSG00000182050.13	-	protein_coding	KNOWN	MGAT4C	11	9	-0.629392
chr12	85958686	85960946	85959816	ENSG00000258178.1	+	lincRNA	KNOWN	RP11-18J9.3	1	2	-0.336466
chr12	86015697	86016441	86016069	ENSG00000257897.1	+	processed_pseudogene	KNOWN	RP11-812D23.1	1	1	-0.644974
chr12	86599578	86838998	86719288	ENSG00000258185.2	-	lincRNA	KNOWN	RP11-202H2.1	1	3	-0.552991
chr12	86745078	86745136	86745107	ENSG00000264077.2	-	miRNA	NOVEL	AC010196.1	1	1	-0.408906
chr12	87041916	87042423	87042169	ENSG00000280049.1	+	TEC	KNOWN	RP11-324H9.1	1	1	-0.708699
chr12	87169985	87170429	87170207	ENSG00000242850.3	-	processed_pseudogene	KNOWN	RPL23AP68	1	1	-0.342629
chr12	87746567	87746683	87746625	ENSG00000258205.1	+	processed_pseudogene	KNOWN	RP11-248E9.1	1	1	-0.798384
chr12	87750142	87750313	87750227	ENSG00000257648.1	+	processed_pseudogene	KNOWN	CYCSP30	1	1	-0.554000
chr12	87753414	87753447	87753430	ENSG00000258173.1	-	processed_pseudogene	KNOWN	RP11-248E9.4	1	1	-0.554000
chr12	87782163	87784568	87783365	ENSG00000258128.2	-	transcribed_processed_pseudogene	KNOWN	MKRN9P	2	1	-0.819472
chr12	87795733	87802028	87798880	ENSG00000257912.1	+	lincRNA	KNOWN	RP11-248E9.5	1	2	-0.608448
chr12	87816486	87817831	87817158	ENSG00000257940.1	+	lincRNA	KNOWN	RP11-248E9.6	1	3	-0.693110
chr12	87820654	87820918	87820786	ENSG00000258179.1	-	processed_pseudogene	KNOWN	RP11-248E9.7	1	1	-0.693110
chr12	87944885	87950819	87947852	ENSG00000240721.2	+	processed_pseudogene	KNOWN	RPS4XP15	1	2	-0.725329
chr12	87980035	88034037	88007036	ENSG00000165805.9	-	protein_coding	KNOWN	C12orf50	5	13	-0.650944
chr12	87981412	87981516	87981464	ENSG00000278142.1	+	miRNA	NOVEL	AC090060.1	1	1	-0.532141
chr12	88033846	88050160	88042003	ENSG00000133641.17	+	protein_coding	KNOWN	C12orf29	10	7	-0.547401
chr12	88049014	88142216	88095615	ENSG00000198707.14	-	protein_coding	KNOWN	CEP290	8	54	-0.328996
chr12	88051701	88051778	88051739	ENSG00000252747.1	+	rRNA	KNOWN	RNA5SP364	1	1	-0.365357
chr12	88057876	88058578	88058227	ENSG00000257752.1	-	processed_pseudogene	KNOWN	RP11-474L23.3	1	1	-0.365357
chr12	88142296	88199887	88171091	ENSG00000139324.11	+	protein_coding	KNOWN	TMTC3	4	14	-0.247428
chr12	88430442	88430550	88430496	ENSG00000199245.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.243077
chr12	88492793	88580851	88536822	ENSG00000049130.13	-	protein_coding	KNOWN	KITLG	6	10	-0.059692
chr12	88580531	88598218	88589374	ENSG00000281333.1	+	antisense	KNOWN	RP11-900F13.3	1	3	0.000443
chr12	88581639	88581796	88581717	ENSG00000252850.1	+	snRNA	KNOWN	RNU1-117P	1	1	-0.054229
chr12	88601862	88602195	88602028	ENSG00000278011.1	+	lincRNA	KNOWN	RP11-900F13.2	1	1	0.063423
chr12	89010681	89019679	89015180	ENSG00000246363.2	-	lincRNA	KNOWN	RP11-13A1.1	1	3	-0.094971
chr12	89027757	89028522	89028139	ENSG00000257629.1	+	processed_pseudogene	KNOWN	RP11-13A1.2	1	2	-0.094971
chr12	89048187	89309553	89178870	ENSG00000257156.1	-	lincRNA	KNOWN	RP11-13A1.3	1	4	-0.119376
chr12	89282223	89282285	89282254	ENSG00000238302.1	-	snRNA	KNOWN	RNU7-120P	1	1	-0.337516
chr12	89319364	89319649	89319506	ENSG00000257820.1	+	processed_pseudogene	KNOWN	MRPS6P4	1	1	-0.420214
chr12	89347232	89353271	89350251	ENSG00000139318.7	-	protein_coding	KNOWN	DUSP6	5	3	0.023223
chr12	89351015	89353271	89352143	ENSG00000274021.1	+	lincRNA	KNOWN	RP11-823E8.3	1	1	0.225946
chr12	89367807	89369301	89368554	ENSG00000271327.1	+	lincRNA	KNOWN	RP11-1109F11.3	1	1	0.225946
chr12	89371820	89372359	89372089	ENSG00000271259.1	+	lincRNA	KNOWN	RP11-1109F11.5	1	1	-0.072819
chr12	89419718	89526024	89472871	ENSG00000139323.13	-	protein_coding	KNOWN	POC1B	14	12	0.009952
chr12	89500093	89502670	89501381	ENSG00000226982.4	+	processed_pseudogene	KNOWN	CENPCP1	1	1	0.197701
chr12	89519408	89524806	89522107	ENSG00000257594.3	-	protein_coding	KNOWN	GALNT4	1	1	-0.038069
chr12	89519408	89526262	89522835	ENSG00000259075.6	-	protein_coding	KNOWN	POC1B-GALNT4	2	3	-0.038069
chr12	89525654	89548005	89536829	ENSG00000270344.2	+	antisense	KNOWN	RP11-734K2.4	1	2	0.194399
chr12	89544203	89544488	89544345	ENSG00000279939.1	-	TEC	KNOWN	RP11-734K2.3	1	1	0.250496
chr12	89561129	89594878	89578003	ENSG00000258302.2	+	antisense	KNOWN	RP11-981P6.1	1	2	0.004821
chr12	89588049	89709300	89648674	ENSG00000070961.15	-	protein_coding	KNOWN	ATP2B1	11	21	-0.164007
chr12	89592833	89592927	89592880	ENSG00000266347.2	+	miRNA	NOVEL	AC068641.1	1	1	-0.169336
chr12	89708959	89712590	89710774	ENSG00000271614.1	+	lincRNA	KNOWN	LINC00936	1	1	-0.318351
chr12	89726936	89727042	89726989	ENSG00000252207.1	+	rRNA	KNOWN	RNA5SP365	1	1	-0.311364
chr12	89752913	89753831	89753372	ENSG00000257480.1	+	processed_pseudogene	KNOWN	MRPL2P1	1	1	-0.227888
chr12	89754059	89754152	89754105	ENSG00000252823.1	+	snRNA	KNOWN	RNU6-148P	1	1	-0.227888
chr12	89882665	89989289	89935977	ENSG00000258216.5	+	lincRNA	KNOWN	RP11-654D12.2	2	4	-0.227443
chr12	89919437	89919776	89919606	ENSG00000258290.1	-	processed_pseudogene	KNOWN	BRWD1P2	1	1	-0.212402
chr12	89947693	89949726	89948709	ENSG00000257725.1	+	lincRNA	KNOWN	RP11-654D12.3	1	3	-0.430574
chr12	90107739	90112779	90110259	ENSG00000257194.2	+	lincRNA	KNOWN	RP11-567C2.1	1	2	-0.314661
chr12	90280894	90300340	90290617	ENSG00000258183.5	+	lincRNA	KNOWN	RP11-753N8.1	3	4	-0.385416
chr12	90617759	90622822	90620290	ENSG00000257995.1	-	lincRNA	KNOWN	RP11-632B21.1	1	2	-0.443605
chr12	90809276	90810680	90809978	ENSG00000257787.1	+	lincRNA	KNOWN	RP11-20L19.1	1	2	-0.858067
chr12	90905622	90955176	90930399	ENSG00000197651.4	-	protein_coding	KNOWN	CCER1	3	4	-0.349977
chr12	90918023	90948669	90933346	ENSG00000196243.5	+	lincRNA	KNOWN	LINC00615	1	5	-0.362095
chr12	90963679	91005026	90984352	ENSG00000083782.7	-	protein_coding	KNOWN	EPYC	3	7	-0.356445
chr12	91050491	91057983	91054237	ENSG00000139330.5	-	protein_coding	KNOWN	KERA	1	3	-0.342728
chr12	91102629	91111831	91107230	ENSG00000139329.4	-	protein_coding	KNOWN	LUM	3	3	-0.226418
chr12	91140484	91183123	91161803	ENSG00000011465.16	-	protein_coding	KNOWN	DCN	20	9	-0.144310
chr12	91193709	91193942	91193825	ENSG00000258148.2	+	processed_pseudogene	KNOWN	AC007115.3	1	1	-0.383587
chr12	91362196	91368606	91365401	ENSG00000258100.1	+	lincRNA	KNOWN	RP11-121E16.1	1	2	-0.227888
chr12	91632912	91633023	91632967	ENSG00000274647.1	-	misc_RNA	NOVEL	DLEU2_6	1	1	-0.683448
chr12	91634887	91635644	91635265	ENSG00000277738.1	+	lincRNA	KNOWN	RP11-693J15.6	1	1	-0.683448
chr12	91680131	91680873	91680502	ENSG00000258125.1	+	lincRNA	KNOWN	RP11-1041F24.1	1	2	-0.525211
chr12	91871122	91871230	91871176	ENSG00000258224.1	-	processed_pseudogene	KNOWN	RP11-587P21.1	1	1	-0.304767
chr12	91877391	91880655	91879023	ENSG00000257893.2	+	lincRNA	KNOWN	RP11-587P21.2	1	2	-0.304767
chr12	91901458	91906187	91903822	ENSG00000257863.1	+	lincRNA	KNOWN	RP11-587P21.3	1	3	-0.297660
chr12	91984976	92142914	92063945	ENSG00000257242.7	-	processed_transcript	KNOWN	LINC01619	10	6	-0.129235
chr12	91986626	91993403	91990014	ENSG00000279037.1	-	protein_coding	KNOWN	AC123512.1	1	4	-0.268306
chr12	91986682	91993403	91990042	ENSG00000280112.1	-	protein_coding	KNOWN	AC123512.2	1	4	-0.268268
chr12	91987578	91993403	91990490	ENSG00000282896.1	-	protein_coding	KNOWN	AC123512.3	1	3	-0.267558
chr12	92140278	92145897	92143087	ENSG00000133639.4	-	protein_coding	KNOWN	BTG1	2	2	-0.178097
chr12	92145573	92189660	92167616	ENSG00000245904.3	+	antisense	KNOWN	RP11-796E2.4	3	3	0.120548
chr12	92168400	92168877	92168638	ENSG00000239201.1	+	processed_pseudogene	KNOWN	RPL21P106	1	1	0.147845
chr12	92170353	92170453	92170403	ENSG00000199895.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.160010
chr12	92247756	92363832	92305794	ENSG00000277851.1	-	lincRNA	KNOWN	RP11-756G20.1	1	5	-0.202845
chr12	92420094	92428148	92424121	ENSG00000205057.4	-	protein_coding	KNOWN	CLLU1OS	1	4	-0.034385
chr12	92421531	92431002	92426266	ENSG00000257127.6	+	protein_coding	KNOWN	CLLU1	5	3	-0.056380
chr12	92421531	92483680	92452605	ENSG00000266923.1	+	antisense	KNOWN	RP11-693J15.4	1	2	-0.345078
chr12	92466451	92492091	92479271	ENSG00000205056.8	+	lincRNA	KNOWN	RP11-693J15.5	1	2	-0.375934
chr12	92530460	92531324	92530892	ENSG00000258262.1	+	processed_pseudogene	KNOWN	RP11-693J15.3	1	1	-0.447167
chr12	92702843	92708549	92705696	ENSG00000214215.3	+	protein_coding	KNOWN	C12orf74	2	3	-0.412313
chr12	92721505	92772455	92746980	ENSG00000187510.7	+	protein_coding	KNOWN	PLEKHG7	2	12	-0.077343
chr12	92770637	92929331	92849984	ENSG00000102189.16	-	protein_coding	KNOWN	EEA1	5	29	-0.022787
chr12	92858079	92859273	92858676	ENSG00000258012.1	+	processed_pseudogene	KNOWN	RP11-603K19.1	1	1	-0.111803
chr12	92883773	92884700	92884236	ENSG00000257195.1	+	processed_pseudogene	KNOWN	HNRNPA1P50	1	1	0.125939
chr12	92952639	92952745	92952692	ENSG00000202534.1	+	snRNA	KNOWN	RNU6-1329P	1	1	0.115839
chr12	92999218	93019820	93009519	ENSG00000257345.2	+	lincRNA	KNOWN	RP11-511B23.1	2	4	-0.056312
chr12	93003415	93215679	93109547	ENSG00000257322.5	-	antisense	KNOWN	RP11-511B23.2	4	4	0.171230
chr12	93021606	93021712	93021659	ENSG00000207365.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.150985
chr12	93035261	93035744	93035502	ENSG00000270506.1	+	processed_pseudogene	KNOWN	RP11-511B23.4	1	1	-0.155936
chr12	93083598	93083675	93083636	ENSG00000256393.1	-	processed_pseudogene	KNOWN	RPL41P5	1	1	0.205761
chr12	93090522	93107600	93099061	ENSG00000257746.1	+	lincRNA	KNOWN	RP11-202G11.2	1	6	0.315575
chr12	93097251	93097344	93097297	ENSG00000221617.1	+	miRNA	NOVEL	AC138123.1	1	1	0.315575
chr12	93124063	93124543	93124303	ENSG00000257210.1	-	processed_pseudogene	KNOWN	NACAP3	1	1	0.435946
chr12	93174366	93181832	93178099	ENSG00000258171.1	+	lincRNA	KNOWN	RP11-511B23.3	1	3	0.318907
chr12	93266017	93266096	93266056	ENSG00000201502.1	+	snoRNA	NOVEL	SNORD74	1	1	0.278870
chr12	93314809	93315941	93315375	ENSG00000257512.1	+	transcribed_processed_pseudogene	KNOWN	RP11-486A14.1	2	1	0.182662
chr12	93317135	93377736	93347435	ENSG00000257252.5	-	antisense	KNOWN	RP11-486A14.2	3	4	0.168093
chr12	93377883	93408146	93393014	ENSG00000173598.13	+	protein_coding	KNOWN	NUDT4	7	6	0.360400
chr12	93405673	93442262	93423967	ENSG00000177889.9	-	protein_coding	KNOWN	UBE2N	6	5	0.144162
chr12	93460725	93460826	93460775	ENSG00000200011.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.107846
chr12	93467488	93516213	93491850	ENSG00000198015.12	+	protein_coding	KNOWN	MRPL42	10	7	0.085231
chr12	93509487	93509768	93509627	ENSG00000243015.2	+	misc_RNA	KNOWN	RN7SL737P	1	1	-0.077933
chr12	93529560	93529989	93529774	ENSG00000258271.1	-	processed_pseudogene	KNOWN	RP11-356O22.4	1	1	0.268870
chr12	93542463	93571768	93557115	ENSG00000246985.7	-	processed_transcript	KNOWN	SOCS2-AS1	4	5	0.025364
chr12	93569814	93583487	93576650	ENSG00000120833.13	+	protein_coding	KNOWN	SOCS2	12	3	0.188748
chr12	93640822	93641586	93641204	ENSG00000186076.5	-	processed_pseudogene	KNOWN	RP11-887P2.3	1	1	0.068276
chr12	93677375	93894840	93786107	ENSG00000169372.12	+	protein_coding	KNOWN	CRADD	12	4	0.094763
chr12	93707791	93737823	93722807	ENSG00000258274.1	-	antisense	KNOWN	RP11-887P2.5	2	3	-0.020970
chr12	93831076	93831372	93831224	ENSG00000264978.2	+	misc_RNA	KNOWN	RN7SL630P	1	1	0.212917
chr12	93836167	93838038	93837102	ENSG00000258303.1	+	sense_intronic	KNOWN	RP11-887P2.6	1	2	0.212917
chr12	93894965	93943603	93919284	ENSG00000257283.1	-	antisense	KNOWN	RP11-1060G2.1	1	3	0.265949
chr12	93945041	93947813	93946427	ENSG00000271382.1	+	lincRNA	KNOWN	RP11-1060G2.2	1	1	0.027503
chr12	94008739	94009047	94008893	ENSG00000223126.1	-	misc_RNA	KNOWN	RN7SKP263	1	1	-0.131680
chr12	94140077	94141337	94140707	ENSG00000257360.1	+	processed_pseudogene	KNOWN	RP11-74K11.1	1	1	0.125544
chr12	94148723	94307675	94228199	ENSG00000136040.8	+	protein_coding	KNOWN	PLXNC1	11	31	0.028830
chr12	94168006	94186044	94177025	ENSG00000258035.1	-	antisense	KNOWN	RP11-74K11.2	2	2	-0.036448
chr12	94272150	94277195	94274672	ENSG00000258172.1	-	antisense	KNOWN	RP11-1105G2.4	1	2	0.289931
chr12	94277758	94282844	94280301	ENSG00000258365.1	-	antisense	KNOWN	RP11-1105G2.3	2	3	0.289931
chr12	94306449	94459988	94383218	ENSG00000173588.14	-	protein_coding	KNOWN	CEP83	14	17	-0.265263
chr12	94361220	94361526	94361373	ENSG00000244391.3	+	misc_RNA	KNOWN	RN7SL330P	1	1	-0.236430
chr12	94423744	94424969	94424356	ENSG00000213250.5	-	processed_pseudogene	KNOWN	RBMS2P1	1	1	-0.598525
chr12	94460003	94462484	94461243	ENSG00000278916.1	+	lincRNA	KNOWN	CEP83-AS1	1	1	-0.002336
chr12	94491546	94496442	94493994	ENSG00000257400.1	-	lincRNA	KNOWN	RP11-778J16.3	1	2	0.065997
chr12	94515476	94515760	94515618	ENSG00000244091.1	+	misc_RNA	KNOWN	RN7SL483P	1	1	0.035089
chr12	94521090	94521869	94521479	ENSG00000258357.1	-	processed_pseudogene	KNOWN	RP11-778J16.2	1	1	0.035089
chr12	94548241	94549536	94548888	ENSG00000236349.1	+	processed_pseudogene	KNOWN	SUCLG2P2	1	1	0.108480
chr12	94561789	94561859	94561824	ENSG00000266099.1	+	miRNA	KNOWN	MIR5700	1	1	-0.079863
chr12	94567124	94650562	94608843	ENSG00000057704.10	-	protein_coding	KNOWN	TMCC3	4	4	-0.108394
chr12	94571231	94571352	94571291	ENSG00000277302.1	-	miRNA	KNOWN	MIR7844	1	1	-0.209835
chr12	94590821	94591093	94590957	ENSG00000257847.1	+	processed_pseudogene	KNOWN	LSM3P2	1	1	-0.126354
chr12	94834147	94835158	94834652	ENSG00000216306.3	+	transcribed_processed_pseudogene	KNOWN	KRT19P2	2	1	-0.078849
chr12	94834398	94834513	94834455	ENSG00000208038.1	+	miRNA	KNOWN	MIR492	1	1	-0.078849
chr12	94897055	95003770	94950412	ENSG00000184752.12	-	protein_coding	KNOWN	NDUFA12	9	5	0.025520
chr12	95020229	95073703	95046966	ENSG00000120798.16	-	protein_coding	KNOWN	NR2C1	19	14	0.012690
chr12	95076749	95217482	95147115	ENSG00000180263.13	-	protein_coding	KNOWN	FGD6	7	21	0.194321
chr12	95100531	95101045	95100788	ENSG00000257121.1	+	processed_pseudogene	KNOWN	RP11-129B9.2	1	1	-0.068944
chr12	95125760	95126389	95126074	ENSG00000237774.3	+	processed_pseudogene	KNOWN	RP11-129B9.1	1	1	0.281334
chr12	95217746	95302790	95260268	ENSG00000028203.17	+	protein_coding	KNOWN	VEZT	41	16	0.045835
chr12	95275770	95275872	95275821	ENSG00000202470.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.001118
chr12	95286318	95286838	95286578	ENSG00000257666.1	-	processed_pseudogene	KNOWN	CBX3P5	1	1	-0.001118
chr12	95290692	95290799	95290745	ENSG00000212535.1	+	snRNA	KNOWN	RNU6-808P	1	1	0.265475
chr12	95308410	95308520	95308465	ENSG00000199172.2	+	miRNA	KNOWN	MIR331	1	1	0.265475
chr12	95309923	95309984	95309953	ENSG00000265917.1	+	miRNA	KNOWN	MIR3685	1	1	0.265475
chr12	95377208	95380896	95379052	ENSG00000258247.1	-	lincRNA	KNOWN	RP11-167N24.6	1	2	-0.149766
chr12	95387890	95388558	95388224	ENSG00000258313.1	-	lincRNA	KNOWN	RP11-167N24.5	1	2	-0.149766
chr12	95388599	95405504	95397051	ENSG00000257583.1	-	lincRNA	KNOWN	RP11-167N24.4	1	2	0.033428
chr12	95407935	95436828	95422381	ENSG00000257943.1	-	processed_transcript	KNOWN	RP11-167N24.3	2	4	0.325979
chr12	95438737	95438843	95438790	ENSG00000222544.1	-	snRNA	KNOWN	RNU6-735P	1	1	0.239422
chr12	95467397	95467861	95467629	ENSG00000241556.1	-	processed_pseudogene	KNOWN	RP11-490G8.1	1	1	0.250357
chr12	95473520	95515839	95494679	ENSG00000111142.13	+	protein_coding	KNOWN	METAP2	11	11	-0.037775
chr12	95516560	95551490	95534025	ENSG00000136014.11	-	protein_coding	KNOWN	USP44	8	6	-0.014654
chr12	95551582	95673999	95612790	ENSG00000257150.3	+	transcribed_processed_pseudogene	KNOWN	PGAM1P5	3	5	0.205562
chr12	95617689	95617786	95617737	ENSG00000212448.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.182190
chr12	95657807	95791152	95724479	ENSG00000074527.11	-	protein_coding	KNOWN	NTN4	7	11	0.149864
chr12	95792529	95792635	95792582	ENSG00000199506.1	-	snRNA	KNOWN	RNU6-247P	1	1	0.030962
chr12	95795345	95858839	95827092	ENSG00000258343.1	-	antisense	KNOWN	RP11-536G4.2	3	3	-0.017434
chr12	95803097	95823307	95813202	ENSG00000258292.1	+	lincRNA	KNOWN	RP11-536G4.1	1	2	0.106778
chr12	95858928	95903828	95881378	ENSG00000139343.10	+	protein_coding	KNOWN	SNRPF	5	5	-0.047269
chr12	95867048	95942974	95905011	ENSG00000165972.12	-	protein_coding	KNOWN	CCDC38	8	16	-0.128185
chr12	95943293	95968716	95956004	ENSG00000139344.7	+	protein_coding	KNOWN	AMDHD1	4	9	-0.369074
chr12	95972662	95996365	95984513	ENSG00000084110.10	-	protein_coding	KNOWN	HAL	11	21	-0.152126
chr12	95996521	96011489	96004005	ENSG00000257878.1	+	antisense	KNOWN	RP11-256L6.3	1	4	-0.145595
chr12	96000828	96043520	96022174	ENSG00000111144.9	-	protein_coding	KNOWN	LTA4H	10	19	-0.218381
chr12	96025323	96027971	96026647	ENSG00000257715.1	+	antisense	KNOWN	RP11-256L6.2	1	2	-0.225978
chr12	96060024	96060375	96060199	ENSG00000258251.1	-	processed_pseudogene	KNOWN	YPEL5P3	1	1	0.039204
chr12	96101951	96102249	96102100	ENSG00000277062.1	-	misc_RNA	KNOWN	RN7SL88P	1	1	0.025649
chr12	96194382	96269835	96232108	ENSG00000111145.7	+	protein_coding	KNOWN	ELK3	6	5	0.348250
chr12	96222797	96223973	96223385	ENSG00000258177.1	-	antisense	KNOWN	RP11-394J1.2	1	2	0.261917
chr12	96278261	96400560	96339410	ENSG00000059758.7	-	protein_coding	KNOWN	CDK17	12	17	0.025857
chr12	96303375	96303513	96303444	ENSG00000201435.1	-	snRNA	KNOWN	RNU4-24P	1	1	-0.238398
chr12	96386818	96387194	96387006	ENSG00000257169.1	-	processed_pseudogene	KNOWN	RP11-117N2.2	1	1	0.278955
chr12	96422326	96485442	96453884	ENSG00000258272.1	-	lincRNA	KNOWN	RP11-510I5.4	1	4	0.111083
chr12	96427200	96427486	96427343	ENSG00000252827.1	-	misc_RNA	KNOWN	RN7SKP11	1	1	0.142618
chr12	96443480	96443549	96443514	ENSG00000280856.1	+	miRNA	NOVEL	AC021052.1	1	1	0.379973
chr12	96489571	96875555	96682563	ENSG00000188596.9	+	protein_coding	KNOWN	CFAP54	8	68	-0.268926
chr12	96900697	96902698	96901697	ENSG00000258846.1	-	processed_pseudogene	KNOWN	EEF1A1P33	1	3	-0.190816
chr12	96907223	96953777	96930500	ENSG00000139350.11	+	protein_coding	KNOWN	NEDD1	13	16	-0.294914
chr12	96979528	96979629	96979578	ENSG00000202368.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.382380
chr12	96985656	97185609	97085632	ENSG00000258131.1	+	lincRNA	KNOWN	RP11-541G9.1	1	2	-0.414873
chr12	97024021	97051129	97037575	ENSG00000257470.1	+	lincRNA	KNOWN	RP11-397H6.1	1	3	-0.260635
chr12	97150081	97154627	97152354	ENSG00000279190.1	-	TEC	KNOWN	RP11-534P6.1	1	1	-0.464878
chr12	97272692	97276209	97274450	ENSG00000257920.1	-	lincRNA	KNOWN	RP11-541G9.2	1	3	-0.095378
chr12	97431653	97565035	97498344	ENSG00000255794.6	+	processed_transcript	KNOWN	RMST	7	14	-0.537547
chr12	97491900	97491983	97491941	ENSG00000221479.2	+	miRNA	KNOWN	MIR1251	1	1	-0.768402
chr12	97492462	97492597	97492529	ENSG00000273942.1	+	misc_RNA	NOVEL	RMST_2	1	1	-0.768402
chr12	97493178	97493286	97493232	ENSG00000274230.1	+	misc_RNA	NOVEL	RMST_3	1	1	-0.768402
chr12	97493897	97494003	97493950	ENSG00000275231.1	+	misc_RNA	NOVEL	RMST_4	1	1	-0.768402
chr12	97495932	97496057	97495994	ENSG00000273570.1	+	misc_RNA	NOVEL	RMST_5	1	1	-0.768402
chr12	97530656	97530858	97530757	ENSG00000275971.1	+	misc_RNA	NOVEL	RMST_6	1	1	-0.582608
chr12	97532691	97532958	97532824	ENSG00000274819.1	+	misc_RNA	NOVEL	RMST_7	1	1	-0.582608
chr12	97552137	97552228	97552182	ENSG00000251844.1	-	snoRNA	NOVEL	snoMe28S-Am2634	1	1	-0.193100
chr12	97560557	97560721	97560639	ENSG00000278802.1	+	misc_RNA	NOVEL	RMST_8	1	1	-0.193100
chr12	97560856	97561048	97560952	ENSG00000276398.1	+	misc_RNA	NOVEL	RMST_9	1	1	-0.193100
chr12	97563257	97563971	97563614	ENSG00000279798.1	-	TEC	KNOWN	RP11-528M18.2	1	1	-0.193100
chr12	97563812	97563911	97563861	ENSG00000207586.1	+	miRNA	KNOWN	MIR135A2	1	1	-0.193100
chr12	97564174	97564327	97564250	ENSG00000277081.1	+	misc_RNA	NOVEL	RMST_10	1	1	-0.193100
chr12	97679879	97680047	97679963	ENSG00000257157.1	-	processed_pseudogene	KNOWN	RP11-528M18.3	1	1	-0.201739
chr12	97713412	97761859	97737635	ENSG00000257501.6	-	transcribed_processed_pseudogene	KNOWN	RP11-1016B18.1	5	7	-0.442094
chr12	97721716	97721822	97721769	ENSG00000206899.1	+	snRNA	KNOWN	RNU6-36P	1	1	-0.523667
chr12	97939056	97939121	97939088	ENSG00000265861.1	-	miRNA	KNOWN	MIR4495	1	1	-0.124326
chr12	97995383	97995448	97995415	ENSG00000263890.1	-	miRNA	KNOWN	MIR4303	1	1	-0.231953
chr12	98113014	98292445	98202729	ENSG00000258312.1	-	lincRNA	KNOWN	RP11-690J15.1	1	5	-0.188160
chr12	98317741	98318349	98318045	ENSG00000257580.1	+	processed_pseudogene	KNOWN	RP11-718L23.1	1	1	-0.184526
chr12	98417896	98418038	98417967	ENSG00000201296.1	-	snRNA	KNOWN	RNU4-41P	1	1	-0.174083
chr12	98453835	98457145	98455490	ENSG00000227825.4	-	transcribed_processed_pseudogene	KNOWN	SLC9A7P1	2	1	-0.076885
chr12	98485544	98503855	98494699	ENSG00000245017.2	-	lincRNA	KNOWN	RP11-181C3.1	2	4	0.230671
chr12	98512973	98516422	98514697	ENSG00000257167.2	-	antisense	KNOWN	TMPO-AS1	2	3	0.203885
chr12	98515512	98550379	98532945	ENSG00000120802.13	+	protein_coding	KNOWN	TMPO	13	9	-0.032136
chr12	98590723	98591214	98590968	ENSG00000225185.3	-	processed_pseudogene	KNOWN	RP11-481K9.4	1	1	0.138989
chr12	98593591	98606379	98599985	ENSG00000075415.12	+	protein_coding	KNOWN	SLC25A3	17	8	0.138989
chr12	98599635	98599883	98599759	ENSG00000212443.1	+	snoRNA	KNOWN	SNORA53	1	1	0.138989
chr12	98613405	98645113	98629259	ENSG00000166130.14	-	protein_coding	KNOWN	IKBIP	3	3	0.294053
chr12	98645141	98735433	98690287	ENSG00000120868.13	+	protein_coding	KNOWN	APAF1	13	27	0.116813
chr12	98726457	99984654	99355555	ENSG00000185046.18	-	protein_coding	KNOWN	ANKS1B	34	26	-0.417772
chr12	98794485	98794964	98794724	ENSG00000258204.1	+	processed_pseudogene	KNOWN	RP11-90E9.1	1	1	-0.248499
chr12	98931682	98976656	98954169	ENSG00000257458.1	+	antisense	KNOWN	RP11-473C19.1	1	4	-0.607303
chr12	99083783	99083905	99083844	ENSG00000202324.1	-	rRNA	KNOWN	RNA5SP366	1	1	-0.454903
chr12	99093359	99105011	99099185	ENSG00000258039.2	+	antisense	KNOWN	RP11-406H4.1	1	5	-0.615827
chr12	99647753	99650046	99648899	ENSG00000180219.1	+	protein_coding	KNOWN	FAM71C	1	2	-0.490828
chr12	99884046	99884146	99884096	ENSG00000277393.1	+	miRNA	NOVEL	AC078916.1	1	1	-0.303937
chr12	100009052	100009838	100009445	ENSG00000214203.4	-	processed_pseudogene	KNOWN	RPS4XP1	1	1	0.027452
chr12	100026248	100027540	100026894	ENSG00000279148.1	-	TEC	KNOWN	RP11-135F9.4	1	1	-0.194722
chr12	100028455	100142848	100085651	ENSG00000111647.12	-	protein_coding	KNOWN	UHRF1BP1L	10	21	-0.182237
chr12	100032325	100034074	100033199	ENSG00000280088.1	-	TEC	KNOWN	RP11-135F9.3	1	1	-0.647548
chr12	100143058	100144671	100143864	ENSG00000257696.1	+	antisense	KNOWN	RP11-175P13.2	1	2	0.134805
chr12	100156357	100173659	100165008	ENSG00000238105.7	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P5	7	20	0.091090
chr12	100157256	100157338	100157297	ENSG00000221770.1	-	miRNA	NOVEL	AC010203.1	1	1	0.107589
chr12	100158502	100158765	100158633	ENSG00000266610.2	-	misc_RNA	KNOWN	RN7SL176P	1	1	0.107589
chr12	100173196	100199783	100186489	ENSG00000257489.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-175P13.3	4	6	0.049922
chr12	100199122	100241865	100220493	ENSG00000075089.9	+	protein_coding	KNOWN	ACTR6	13	11	0.081444
chr12	100203669	100267079	100235374	ENSG00000166153.16	-	protein_coding	KNOWN	DEPDC4	10	11	0.024133
chr12	100257688	100257790	100257739	ENSG00000206790.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.105241
chr12	100267140	100341724	100304432	ENSG00000136021.18	+	protein_coding	KNOWN	SCYL2	11	19	-0.057172
chr12	100357079	100422059	100389569	ENSG00000179520.10	+	protein_coding	KNOWN	SLC17A8	4	12	-0.134971
chr12	100473708	100564413	100519060	ENSG00000012504.13	+	protein_coding	KNOWN	NR1H4	9	11	-0.284621
chr12	100525186	100525420	100525303	ENSG00000271177.1	-	processed_pseudogene	KNOWN	RP11-575G13.3	1	1	-0.467436
chr12	100573683	100628286	100600984	ENSG00000139354.10	+	protein_coding	KNOWN	GAS2L3	9	10	-0.198790
chr12	100578744	100580197	100579470	ENSG00000257803.2	+	processed_pseudogene	KNOWN	RP11-575G13.2	1	1	-0.445665
chr12	100655722	100655804	100655763	ENSG00000239036.1	-	miRNA	NOVEL	AC010209.1	1	1	0.030591
chr12	100717526	101128641	100923083	ENSG00000151572.16	+	protein_coding	KNOWN	ANO4	8	28	-0.384907
chr12	100852331	100859262	100855796	ENSG00000257325.1	-	antisense	KNOWN	RP11-263E1.1	1	2	-0.354691
chr12	101038420	101039094	101038757	ENSG00000258007.1	-	antisense	KNOWN	RP11-350G24.1	1	2	-0.352572
chr12	101066734	101069232	101067983	ENSG00000258033.1	+	unprocessed_pseudogene	KNOWN	RP11-350G24.2	1	2	-0.642197
chr12	101155493	101210407	101182950	ENSG00000256870.2	-	protein_coding	KNOWN	SLC5A8	1	15	-0.335303
chr12	101199271	101199377	101199324	ENSG00000207414.1	-	snRNA	KNOWN	RNU6-768P	1	1	-0.311073
chr12	101228141	101228876	101228508	ENSG00000241744.1	-	processed_pseudogene	KNOWN	RP11-399D15.1	1	1	-0.469887
chr12	101280109	101386616	101333362	ENSG00000120800.4	+	protein_coding	KNOWN	UTP20	4	62	-0.194915
chr12	101393120	101407820	101400470	ENSG00000120805.13	-	protein_coding	KNOWN	ARL1	11	6	0.072363
chr12	101408372	101409060	101408716	ENSG00000257543.1	-	lincRNA	KNOWN	RP11-321F8.4	1	2	0.072363
chr12	101411357	101411459	101411408	ENSG00000222890.1	+	snRNA	KNOWN	RNU6-1068P	1	1	-0.095635
chr12	101424441	101424691	101424566	ENSG00000239413.1	+	processed_pseudogene	KNOWN	RPS27P23	1	1	-0.095635
chr12	101446825	101446932	101446878	ENSG00000206929.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.138621
chr12	101466705	101466820	101466762	ENSG00000202249.1	+	snRNA	KNOWN	RNU5E-5P	1	1	-0.036113
chr12	101472339	101472456	101472397	ENSG00000252366.1	+	rRNA	KNOWN	RNA5SP367	1	1	0.063233
chr12	101475421	101486997	101481209	ENSG00000166211.7	+	protein_coding	KNOWN	SPIC	1	6	0.063233
chr12	101568353	101686018	101627185	ENSG00000196091.12	+	protein_coding	KNOWN	MYBPC1	24	32	-0.419429
chr12	101646720	101659970	101653345	ENSG00000257514.5	-	antisense	KNOWN	RP11-755O11.2	2	2	-0.638628
chr12	101696002	101696450	101696226	ENSG00000274560.1	-	lincRNA	KNOWN	RP11-285E23.2	1	1	-0.092433
chr12	101696947	101744140	101720543	ENSG00000111666.10	+	protein_coding	KNOWN	CHPT1	10	10	-0.285040
chr12	101719808	101719918	101719863	ENSG00000199933.1	+	misc_RNA	KNOWN	RNY1P16	1	1	-0.142473
chr12	101728648	101739472	101734060	ENSG00000139351.14	-	protein_coding	KNOWN	SYCP3	5	9	-0.599300
chr12	101745497	101830938	101788217	ENSG00000111670.14	-	protein_coding	KNOWN	GNPTAB	10	21	-0.162139
chr12	101765406	101765509	101765457	ENSG00000222255.1	-	snRNA	KNOWN	RNU6-101P	1	1	-0.105689
chr12	101773114	101773755	101773434	ENSG00000258230.2	-	transcribed_processed_pseudogene	KNOWN	RP11-511H9.3	2	1	-0.318473
chr12	101779814	101779929	101779871	ENSG00000201168.1	+	rRNA	KNOWN	RNA5SP368	1	1	-0.318473
chr12	101796410	101796502	101796456	ENSG00000222932.1	-	snRNA	KNOWN	RNU6-172P	1	1	0.034441
chr12	101836820	101836927	101836873	ENSG00000223046.1	+	rRNA	KNOWN	RNA5SP369	1	1	-0.110005
chr12	101871742	101871801	101871771	ENSG00000252863.1	-	snRNA	KNOWN	RNU6-1183P	1	1	0.547874
chr12	101873316	101873623	101873469	ENSG00000258153.1	-	processed_pseudogene	KNOWN	HSPE1P4	1	1	0.547874
chr12	101877351	102012130	101944740	ENSG00000136048.13	+	protein_coding	KNOWN	DRAM1	7	7	-0.010665
chr12	101923410	101924719	101924064	ENSG00000257202.1	-	antisense	KNOWN	RP11-512N21.3	1	3	0.261917
chr12	101936216	101936674	101936445	ENSG00000241917.1	+	processed_pseudogene	KNOWN	RP11-512N21.1	1	1	0.099727
chr12	101954998	101962390	101958694	ENSG00000258308.5	-	lincRNA	KNOWN	RP11-554E23.2	2	3	0.061618
chr12	101963901	101964340	101964120	ENSG00000258288.1	+	processed_pseudogene	KNOWN	NENFP2	1	1	0.061618
chr12	102012927	102062149	102037538	ENSG00000120860.10	-	protein_coding	KNOWN	CCDC53	13	8	-0.161870
chr12	102063355	102074820	102069087	ENSG00000257222.1	+	antisense	KNOWN	RP11-554E23.4	1	3	-0.313712
chr12	102073103	102120124	102096613	ENSG00000075188.8	-	protein_coding	KNOWN	NUP37	9	10	-0.159756
chr12	102075068	102075229	102075148	ENSG00000281370.1	+	protein_coding	KNOWN	AC079907.1	1	2	-0.097979
chr12	102120185	102197520	102158852	ENSG00000185480.11	+	protein_coding	KNOWN	PARPBP	12	12	-0.348649
chr12	102196459	102197845	102197152	ENSG00000183395.4	-	protein_coding	KNOWN	PMCH	1	3	-0.479165
chr12	102197585	102402596	102300090	ENSG00000281344.1	+	macro_lncRNA	KNOWN	HELLPAR	1	1	-0.395608
chr12	102217318	102217613	102217465	ENSG00000264554.2	-	misc_RNA	KNOWN	RN7SL793P	1	1	-0.740898
chr12	102230027	102230533	102230280	ENSG00000258142.2	-	processed_pseudogene	KNOWN	RP11-18O15.1	1	1	-0.385486
chr12	102304355	102463491	102383923	ENSG00000283052.1	+	lincRNA	KNOWN	RP11-210L7.3	1	6	-0.254097
chr12	102395867	102480645	102438256	ENSG00000017427.15	-	protein_coding	KNOWN	IGF1	7	6	-0.169511
chr12	102513251	102513655	102513453	ENSG00000257254.1	-	processed_pseudogene	KNOWN	RP11-210L7.1	1	1	0.024088
chr12	102809280	102824399	102816839	ENSG00000258169.1	-	lincRNA	KNOWN	LINC00485	1	5	-0.510471
chr12	102836885	102958410	102897647	ENSG00000171759.9	-	protein_coding	KNOWN	PAH	18	14	-0.226792
chr12	102953289	102953835	102953562	ENSG00000282964.1	-	sense_intronic	KNOWN	RP11-438H24.2	1	1	0.057016
chr12	102957686	102960516	102959101	ENSG00000139352.3	+	protein_coding	KNOWN	ASCL1	1	2	0.057016
chr12	103080950	103178675	103129812	ENSG00000257703.5	-	lincRNA	KNOWN	RP11-328J6.1	2	3	-0.452470
chr12	103151842	103168309	103160075	ENSG00000257860.5	+	lincRNA	KNOWN	RP11-552I14.1	4	7	-0.672792
chr12	103237591	103496010	103366800	ENSG00000179088.14	-	protein_coding	KNOWN	C12orf42	16	11	-0.342158
chr12	103238398	103238475	103238436	ENSG00000238909.1	-	miRNA	NOVEL	AC068643.1	1	1	-0.211255
chr12	103503381	103504936	103504158	ENSG00000257415.1	+	processed_pseudogene	KNOWN	RP11-626I20.1	1	1	-0.368489
chr12	103505411	103506174	103505792	ENSG00000257994.1	-	unprocessed_pseudogene	KNOWN	RP11-626I20.2	1	2	-0.368489
chr12	103547794	103559815	103553804	ENSG00000257762.5	+	lincRNA	KNOWN	RP11-626I20.3	2	5	0.061986
chr12	103587273	103766727	103677000	ENSG00000136011.14	+	protein_coding	KNOWN	STAB2	6	69	-0.123578
chr12	103592112	103592243	103592177	ENSG00000212594.1	+	snoRNA	NOVEL	U8	1	1	-0.255174
chr12	103654780	103657995	103656387	ENSG00000257737.1	-	antisense	KNOWN	RP11-341G23.2	1	2	-0.142872
chr12	103668575	103669406	103668990	ENSG00000257766.1	-	antisense	KNOWN	RP11-341G23.3	1	2	-0.142872
chr12	103746315	103768858	103757586	ENSG00000257681.1	-	antisense	KNOWN	RP11-341G23.4	2	3	0.292896
chr12	103770453	103841197	103805825	ENSG00000111696.11	-	protein_coding	KNOWN	NT5DC3	5	14	0.181754
chr12	103819610	103822085	103820847	ENSG00000257754.1	+	antisense	KNOWN	RP11-650K20.2	1	3	0.172162
chr12	103841451	103844664	103843057	ENSG00000257327.1	+	lincRNA	KNOWN	RP11-650K20.3	1	2	0.116104
chr12	103843749	103930211	103886980	ENSG00000214198.7	-	unitary_pseudogene	KNOWN	TTC41P	7	15	0.067601
chr12	103930107	103953645	103941876	ENSG00000166598.12	+	protein_coding	KNOWN	HSP90B1	10	18	0.082265
chr12	103930425	103930555	103930490	ENSG00000265072.1	+	miRNA	KNOWN	MIR3652	1	1	0.053103
chr12	103950202	103965708	103957955	ENSG00000204954.9	-	protein_coding	KNOWN	C12orf73	11	5	0.241369
chr12	103965804	103988874	103977339	ENSG00000139372.14	+	protein_coding	KNOWN	TDG	10	11	0.246721
chr12	103985111	103985204	103985157	ENSG00000215976.1	+	miRNA	NOVEL	AC078819.1	1	1	0.247910
chr12	103988984	104064183	104026583	ENSG00000120820.12	-	protein_coding	KNOWN	GLT8D2	7	11	0.187154
chr12	104030779	104031543	104031161	ENSG00000216285.5	+	processed_pseudogene	KNOWN	RP11-490H24.5	1	1	0.206928
chr12	104064457	104106524	104085490	ENSG00000111727.11	+	protein_coding	KNOWN	HCFC2	6	15	0.126203
chr12	104117077	104138289	104127683	ENSG00000120837.7	-	protein_coding	KNOWN	NFYB	5	8	0.002517
chr12	104125236	104125356	104125296	ENSG00000199415.1	+	rRNA	KNOWN	RNA5SP370	1	1	0.001226
chr12	104125268	104125329	104125298	ENSG00000280646.1	+	miRNA	NOVEL	AC089983.1	1	1	0.001226
chr12	104170395	104177659	104174027	ENSG00000257193.1	+	lincRNA	KNOWN	RP11-818F20.4	1	3	0.099645
chr12	104215779	104350305	104283042	ENSG00000198431.15	+	protein_coding	KNOWN	TXNRD1	24	18	0.383124
chr12	104262314	104280722	104271518	ENSG00000257732.1	-	antisense	KNOWN	RP11-818F20.5	1	2	0.497442
chr12	104265309	104265836	104265572	ENSG00000213442.5	+	processed_pseudogene	KNOWN	RPL18AP3	1	1	0.330504
chr12	104303739	104305202	104304470	ENSG00000255150.1	+	protein_coding	KNOWN	EID3	1	1	0.709048
chr12	104455295	104762014	104608654	ENSG00000171310.10	+	protein_coding	KNOWN	CHST11	6	3	0.269524
chr12	104514029	104514439	104514234	ENSG00000258111.1	+	processed_pseudogene	KNOWN	RP11-43D4.2	1	1	-0.016533
chr12	104552073	104553447	104552760	ENSG00000279176.1	+	TEC	KNOWN	RP11-43D4.3	1	1	0.324165
chr12	104591633	104591716	104591674	ENSG00000264295.1	+	miRNA	KNOWN	MIR3922	1	1	0.205202
chr12	104802553	104958744	104880648	ENSG00000136052.9	-	protein_coding	KNOWN	SLC41A2	10	10	-0.138779
chr12	104851824	104851918	104851871	ENSG00000222579.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.374093
chr12	104951760	104951846	104951803	ENSG00000265054.1	+	miRNA	NOVEL	AC090051.1	1	1	0.018928
chr12	104976749	104978027	104977388	ENSG00000257758.1	-	processed_pseudogene	KNOWN	KRT18P20	1	1	0.010920
chr12	104986310	105049737	105018023	ENSG00000151131.9	+	protein_coding	KNOWN	C12orf45	4	5	0.220844
chr12	105019784	105084577	105052180	ENSG00000136010.13	-	protein_coding	KNOWN	ALDH1L2	5	23	0.161977
chr12	105072486	105074021	105073253	ENSG00000257886.1	+	antisense	KNOWN	RP11-61E11.1	1	2	0.347249
chr12	105102472	105107179	105104825	ENSG00000257999.1	-	antisense	KNOWN	RP11-61E11.2	1	2	0.147335
chr12	105107324	105169134	105138229	ENSG00000136051.13	+	protein_coding	KNOWN	KIAA1033	14	33	0.128764
chr12	105173296	105236238	105204767	ENSG00000136044.11	-	protein_coding	KNOWN	APPL2	16	21	0.350538
chr12	105235290	105396097	105315693	ENSG00000235162.8	+	protein_coding	KNOWN	C12orf75	8	7	0.289764
chr12	105304867	105327017	105315942	ENSG00000257642.1	-	antisense	KNOWN	RP11-474B16.1	1	3	0.202050
chr12	105327906	105327992	105327949	ENSG00000264749.1	-	miRNA	NOVEL	AC011313.1	1	1	0.190396
chr12	105704203	105744062	105724132	ENSG00000257859.1	+	lincRNA	KNOWN	CASC18	2	3	0.019363
chr12	106015897	106017006	106016451	ENSG00000257773.1	+	processed_pseudogene	KNOWN	ST13P3	1	1	0.194043
chr12	106050961	106058254	106054607	ENSG00000257890.1	-	lincRNA	KNOWN	RP11-114F10.2	1	4	0.328528
chr12	106063340	106140033	106101686	ENSG00000074590.13	-	protein_coding	KNOWN	NUAK1	4	7	0.436217
chr12	106103163	106106165	106104664	ENSG00000257438.1	+	antisense	KNOWN	RP11-114F10.3	1	3	0.641195
chr12	106170004	106172437	106171220	ENSG00000257611.1	+	processed_pseudogene	KNOWN	RP11-185N2.1	1	1	0.154388
chr12	106237877	106304279	106271078	ENSG00000136026.13	-	protein_coding	KNOWN	CKAP4	3	4	0.165835
chr12	106245613	106246956	106246284	ENSG00000258355.1	-	sense_intronic	KNOWN	RP11-651L5.2	1	2	0.496919
chr12	106250759	106252786	106251772	ENSG00000277715.1	+	antisense	KNOWN	RP11-651L5.3	1	1	0.262756
chr12	106282927	106282989	106282958	ENSG00000238609.1	-	snRNA	KNOWN	RNU7-94P	1	1	-0.132975
chr12	106301929	106347015	106324472	ENSG00000166046.10	+	protein_coding	KNOWN	TCP11L2	10	10	0.298137
chr12	106357658	106510198	106433928	ENSG00000013503.9	+	protein_coding	KNOWN	POLR3B	4	28	-0.110081
chr12	106495958	106774918	106635438	ENSG00000257545.4	-	antisense	KNOWN	RP11-144F15.1	2	4	-0.207366
chr12	106582907	106762803	106672855	ENSG00000111783.12	+	protein_coding	KNOWN	RFX4	12	18	-0.209499
chr12	106680758	106684700	106682729	ENSG00000257711.1	-	antisense	KNOWN	RP11-482D24.2	1	4	-0.441832
chr12	106714924	106733066	106723995	ENSG00000257918.1	-	antisense	KNOWN	RP11-482D24.3	1	2	-0.090632
chr12	106774595	106889316	106831955	ENSG00000111785.18	+	protein_coding	KNOWN	RIC8B	12	13	-0.144184
chr12	106901283	106901984	106901633	ENSG00000257119.1	-	processed_pseudogene	KNOWN	EEF1B2P4	1	2	0.083954
chr12	106910757	106911109	106910933	ENSG00000240631.1	+	processed_pseudogene	KNOWN	RPL30P12	1	1	0.075019
chr12	106954029	106955497	106954763	ENSG00000260329.1	-	antisense	KNOWN	RP11-412D9.4	1	1	-0.104073
chr12	106955719	106978778	106967248	ENSG00000151135.9	+	protein_coding	KNOWN	TMEM263	9	5	-0.026168
chr12	106977291	106987166	106982228	ENSG00000120832.9	-	protein_coding	KNOWN	MTERF2	7	3	0.100554
chr12	106991364	107093829	107042596	ENSG00000008405.11	-	protein_coding	KNOWN	CRY1	5	13	-0.260554
chr12	107093298	107123314	107108306	ENSG00000257548.1	+	antisense	KNOWN	RP11-797M17.1	1	4	-0.126204
chr12	107271394	107271846	107271620	ENSG00000257444.1	+	processed_pseudogene	KNOWN	SETP7	1	1	-0.200035
chr12	107318413	107659642	107489027	ENSG00000151136.14	+	protein_coding	KNOWN	BTBD11	7	17	-0.095907
chr12	107374747	107374827	107374787	ENSG00000200897.1	+	snoRNA	NOVEL	SNORD74	1	1	-0.122747
chr12	107486511	107486635	107486573	ENSG00000222302.1	-	rRNA	KNOWN	RNA5SP371	1	1	0.099605
chr12	107610034	107617721	107613877	ENSG00000257579.1	-	antisense	KNOWN	RP11-128P10.1	1	2	0.063841
chr12	107650789	107650892	107650840	ENSG00000222160.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.186984
chr12	107685732	107713167	107699449	ENSG00000136045.11	+	protein_coding	KNOWN	PWP1	5	15	0.151773
chr12	107719599	107720133	107719866	ENSG00000240441.1	+	processed_pseudogene	KNOWN	RP11-864J10.2	1	1	-0.066912
chr12	107732866	107761272	107747069	ENSG00000110851.11	-	protein_coding	KNOWN	PRDM4	6	12	-0.006698
chr12	107736555	107759968	107748261	ENSG00000258136.1	+	antisense	KNOWN	RP11-864J10.4	2	5	-0.006479
chr12	107774385	107776644	107775514	ENSG00000187855.5	+	protein_coding	KNOWN	ASCL4	1	1	-0.084259
chr12	107799635	107799720	107799677	ENSG00000263632.1	-	miRNA	NOVEL	AC126177.1	1	1	0.033777
chr12	107832858	107835030	107833944	ENSG00000257141.1	-	lincRNA	KNOWN	RP11-554D14.7	1	2	-0.514666
chr12	107835541	107836555	107836048	ENSG00000274395.1	-	lincRNA	KNOWN	RP11-554D14.8	1	1	-0.514666
chr12	107839291	107864562	107851926	ENSG00000257398.6	-	lincRNA	KNOWN	RP11-554D14.6	2	5	-0.299142
chr12	107881242	107883382	107882312	ENSG00000257951.1	+	unprocessed_pseudogene	KNOWN	RP11-554D14.4	1	2	-0.297050
chr12	107887730	107889886	107888808	ENSG00000257392.1	+	unprocessed_pseudogene	KNOWN	RP11-554D14.5	1	2	-0.297050
chr12	107899638	107899815	107899726	ENSG00000257426.1	+	unprocessed_pseudogene	KNOWN	RP11-554D14.3	1	1	-0.363090
chr12	107903270	107903948	107903609	ENSG00000258072.1	-	processed_pseudogene	KNOWN	RP11-554D14.2	1	1	-0.363090
chr12	107910403	107912620	107911511	ENSG00000257129.1	-	transcribed_processed_pseudogene	KNOWN	RP11-554D14.1	2	1	0.029931
chr12	108129471	108250537	108190004	ENSG00000075035.9	+	protein_coding	KNOWN	WSCD2	13	10	-0.113519
chr12	108133601	108133679	108133640	ENSG00000276750.1	+	miRNA	NOVEL	AC009729.1	1	1	-0.189190
chr12	108281103	108282235	108281669	ENSG00000257281.1	-	processed_pseudogene	KNOWN	RP11-1K3.1	1	1	0.091992
chr12	108288044	108339341	108313692	ENSG00000174600.13	-	protein_coding	KNOWN	CMKLR1	6	4	0.071071
chr12	108301525	108301596	108301560	ENSG00000280860.1	-	miRNA	NOVEL	AC063957.1	1	1	-0.034838
chr12	108434130	108492585	108463357	ENSG00000247213.6	-	antisense	KNOWN	LINC01498	2	18	-0.128414
chr12	108515185	108525837	108520511	ENSG00000198855.6	+	protein_coding	KNOWN	FICD	5	3	0.113907
chr12	108522580	108561400	108541990	ENSG00000075856.11	-	protein_coding	KNOWN	SART3	16	19	0.187315
chr12	108562582	108569384	108565983	ENSG00000136003.15	+	protein_coding	KNOWN	ISCU	13	7	0.125939
chr12	108589846	108598320	108594083	ENSG00000183160.8	-	protein_coding	KNOWN	TMEM119	4	3	0.664419
chr12	108622277	108633959	108628118	ENSG00000110876.9	-	protein_coding	KNOWN	SELPLG	3	2	0.664019
chr12	108628687	108641318	108635002	ENSG00000257221.1	+	antisense	KNOWN	RP11-689B22.2	2	3	0.638348
chr12	108645109	108731596	108688352	ENSG00000110880.10	-	protein_coding	KNOWN	CORO1C	19	11	0.302207
chr12	108668448	108668508	108668478	ENSG00000238457.1	+	snRNA	KNOWN	RNU7-169P	1	1	0.420318
chr12	108738484	108738604	108738544	ENSG00000200060.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.196961
chr12	108778144	108778271	108778207	ENSG00000273499.1	-	snoRNA	NOVEL	SNORA40	1	1	0.590931
chr12	108778192	108857590	108817891	ENSG00000084112.14	-	protein_coding	KNOWN	SSH1	9	15	0.537495
chr12	108778912	108779166	108779039	ENSG00000280110.1	+	TEC	KNOWN	RP11-423G4.8	1	1	0.590931
chr12	108833721	108834384	108834052	ENSG00000274598.1	-	sense_intronic	KNOWN	RP11-423G4.10	1	1	0.459895
chr12	108836908	108837006	108836957	ENSG00000207622.1	-	miRNA	KNOWN	MIR619	1	1	0.459895
chr12	108858932	108901043	108879987	ENSG00000110887.7	+	protein_coding	KNOWN	DAO	8	11	0.462779
chr12	108907741	109021240	108964490	ENSG00000166111.9	-	protein_coding	KNOWN	SVOP	5	16	0.116048
chr12	108926435	108926541	108926488	ENSG00000201324.1	-	snRNA	KNOWN	RNU6-361P	1	1	0.386562
chr12	108987555	108987645	108987600	ENSG00000238424.1	-	miRNA	NOVEL	AC190387.2	1	1	-0.005983
chr12	109020833	109021240	109021036	ENSG00000279630.1	-	TEC	KNOWN	AC190387.1	1	1	-0.001667
chr12	109023089	109088026	109055557	ENSG00000135093.12	+	protein_coding	KNOWN	USP30	10	16	-0.117284
chr12	109052350	109053952	109053151	ENSG00000256262.1	-	antisense	KNOWN	USP30-AS1	1	2	-0.140051
chr12	109059986	109060100	109060043	ENSG00000212138.1	+	rRNA	KNOWN	RNA5SP372	1	1	-0.140051
chr12	109088188	109093631	109090909	ENSG00000189046.10	-	protein_coding	KNOWN	ALKBH2	8	4	0.044543
chr12	109097574	109110992	109104283	ENSG00000076248.10	+	protein_coding	KNOWN	UNG	5	7	0.188787
chr12	109111218	109125594	109118406	ENSG00000256139.2	+	sense_overlapping	KNOWN	RP11-968O1.5	1	3	0.211291
chr12	109116595	109268226	109192410	ENSG00000076555.15	+	protein_coding	KNOWN	ACACB	15	53	0.277560
chr12	109277979	109309220	109293599	ENSG00000139445.17	-	protein_coding	KNOWN	FOXN4	4	10	0.356666
chr12	109347903	109455523	109401713	ENSG00000174527.9	+	protein_coding	KNOWN	MYO1H	6	32	0.138762
chr12	109354083	109359488	109356785	ENSG00000256560.1	-	lincRNA	KNOWN	LINC01486	1	3	-0.237714
chr12	109445410	109447497	109446453	ENSG00000255655.1	-	antisense	KNOWN	RP11-256L11.3	1	2	0.494538
chr12	109448656	109477544	109463100	ENSG00000110906.12	-	protein_coding	KNOWN	KCTD10	16	7	0.613595
chr12	109477402	109536705	109507053	ENSG00000151148.13	+	protein_coding	KNOWN	UBE3B	13	29	0.467018
chr12	109553737	109573874	109563805	ENSG00000139428.11	-	protein_coding	KNOWN	MMAB	10	10	0.645915
chr12	109567975	109568115	109568045	ENSG00000200274.1	-	snRNA	KNOWN	RNU4-32P	1	1	0.685567
chr12	109573255	109598117	109585686	ENSG00000110921.11	+	protein_coding	KNOWN	MVK	14	11	0.504942
chr12	109662863	109663183	109663023	ENSG00000200794.1	-	misc_RNA	KNOWN	RN7SKP250	1	1	0.334353
chr12	109714228	109770507	109742367	ENSG00000139438.5	+	protein_coding	KNOWN	FAM222A	3	3	0.391723
chr12	109734166	109773508	109753837	ENSG00000255650.5	-	antisense	KNOWN	FAM222A-AS1	3	4	0.342346
chr12	109783085	109833401	109808243	ENSG00000111199.10	-	protein_coding	KNOWN	TRPV4	8	16	0.615385
chr12	109833348	109833436	109833392	ENSG00000263510.1	+	miRNA	KNOWN	MIR4497	1	1	0.671416
chr12	109850943	109880488	109865715	ENSG00000139433.9	-	protein_coding	KNOWN	GLTP	6	6	0.518890
chr12	109859767	109860420	109860093	ENSG00000256351.1	-	processed_pseudogene	KNOWN	RP1-7G5.5	1	2	0.586256
chr12	109866214	109866509	109866361	ENSG00000241413.3	-	misc_RNA	KNOWN	RN7SL441P	1	1	0.586256
chr12	109880676	109888467	109884571	ENSG00000249094.2	+	lincRNA	KNOWN	RP1-7G5.6	1	2	0.396503
chr12	109900264	109983841	109942052	ENSG00000139437.17	+	protein_coding	KNOWN	TCHP	10	15	0.615287
chr12	109929792	109996389	109963090	ENSG00000139436.20	-	protein_coding	KNOWN	GIT2	20	20	0.611613
chr12	109948389	109949029	109948709	ENSG00000277299.1	+	antisense	KNOWN	RP11-837J7.4	1	1	0.963137
chr12	109997419	109999127	109998273	ENSG00000280426.1	-	TEC	KNOWN	RP11-837J7.3	1	1	0.363538
chr12	109999186	110039763	110019474	ENSG00000076513.16	+	protein_coding	KNOWN	ANKRD13A	10	15	0.422091
chr12	110027028	110073686	110050357	ENSG00000174456.13	-	protein_coding	KNOWN	C12orf76	9	5	0.446485
chr12	110032245	110032803	110032524	ENSG00000277595.1	+	sense_intronic	KNOWN	RP11-946P6.6	1	1	0.340736
chr12	110056916	110057275	110057095	ENSG00000279360.1	-	TEC	KNOWN	RP11-946P6.4	1	1	0.489181
chr12	110124335	110218797	110171566	ENSG00000122970.15	+	protein_coding	KNOWN	IFT81	9	20	0.273303
chr12	110280756	110351093	110315924	ENSG00000174437.16	+	protein_coding	KNOWN	ATP2A2	12	21	0.501154
chr12	110360452	110360746	110360599	ENSG00000276956.1	-	misc_RNA	KNOWN	RN7SL769P	1	1	0.570645
chr12	110360456	110360538	110360497	ENSG00000281030.1	-	miRNA	NOVEL	AC006088.1	1	1	0.570645
chr12	110372900	110403730	110388315	ENSG00000196510.12	-	protein_coding	KNOWN	ANAPC7	12	11	0.623934
chr12	110387463	110445548	110416505	ENSG00000258210.1	-	processed_transcript	KNOWN	RP11-478C19.2	1	5	0.377790
chr12	110429959	110430282	110430120	ENSG00000258011.2	-	processed_pseudogene	KNOWN	HMGA1P3	1	1	0.175954
chr12	110434825	110450422	110442623	ENSG00000111229.15	-	protein_coding	KNOWN	ARPC3	9	7	0.150472
chr12	110452484	110469268	110460876	ENSG00000111231.8	-	protein_coding	KNOWN	GPN3	10	8	0.385491
chr12	110460988	110461362	110461175	ENSG00000241680.1	+	processed_pseudogene	KNOWN	RPL31P49	1	1	0.385491
chr12	110468364	110490385	110479374	ENSG00000204856.11	+	protein_coding	KNOWN	FAM216A	6	7	0.502955
chr12	110491097	110502117	110496607	ENSG00000111237.18	-	protein_coding	KNOWN	VPS29	12	6	0.289438
chr12	110496352	110496421	110496386	ENSG00000202335.1	-	snoRNA	NOVEL	SNORD50	1	1	0.289438
chr12	110501614	110503441	110502527	ENSG00000278993.1	+	TEC	KNOWN	RP3-424M6.4	1	1	0.289438
chr12	110501655	110532086	110516870	ENSG00000151164.18	+	protein_coding	KNOWN	RAD9B	9	12	0.129695
chr12	110533245	110583320	110558282	ENSG00000196850.5	-	protein_coding	KNOWN	PPTC7	2	6	0.273308
chr12	110614027	110649430	110631728	ENSG00000204852.15	+	protein_coding	KNOWN	TCTN1	29	16	0.243923
chr12	110625645	110625917	110625781	ENSG00000263537.2	-	misc_RNA	KNOWN	RN7SL387P	1	1	0.378463
chr12	110627841	110704950	110666395	ENSG00000122986.13	-	protein_coding	KNOWN	HVCN1	9	8	0.341554
chr12	110632604	110632693	110632648	ENSG00000221246.1	+	miRNA	NOVEL	AC144522.1	1	1	0.133333
chr12	110719680	110742939	110731309	ENSG00000186298.11	-	protein_coding	KNOWN	PPP1CC	11	8	0.227276
chr12	110744549	110746206	110745377	ENSG00000279925.1	+	TEC	KNOWN	RP11-481J8.3	1	1	0.116938
chr12	110831779	110845963	110838871	ENSG00000257268.1	+	lincRNA	KNOWN	RP1-74B13.2	1	2	0.397241
chr12	110841538	110842387	110841962	ENSG00000241286.2	-	processed_pseudogene	KNOWN	RPL29P25	1	1	0.397241
chr12	110846769	110907535	110877152	ENSG00000173093.12	+	protein_coding	KNOWN	CCDC63	4	12	0.240535
chr12	110910819	110920722	110915770	ENSG00000111245.14	-	protein_coding	KNOWN	MYL2	4	7	0.084087
chr12	110936585	110958208	110947396	ENSG00000185847.7	+	lincRNA	KNOWN	LINC01405	4	3	0.144507
chr12	110951683	110957812	110954747	ENSG00000258240.5	-	lincRNA	KNOWN	RP1-46F2.3	2	4	-0.147679
chr12	111034024	111350554	111192289	ENSG00000111249.13	+	protein_coding	KNOWN	CUX2	3	22	0.187432
chr12	111073968	111074089	111074028	ENSG00000221259.1	+	miRNA	NOVEL	AC002978.1	1	1	-0.016943
chr12	111302800	111302899	111302849	ENSG00000221386.1	+	miRNA	NOVEL	AC002979.1	1	1	0.511368
chr12	111304142	111304209	111304175	ENSG00000273700.1	+	miRNA	KNOWN	MIR6760	1	1	0.511368
chr12	111339527	111339621	111339574	ENSG00000253080.1	+	rRNA	KNOWN	RNA5SP373	1	1	0.412325
chr12	111360651	111369121	111364886	ENSG00000198324.13	-	protein_coding	KNOWN	FAM109A	5	4	0.337512
chr12	111369282	111403310	111386296	ENSG00000257595.2	+	lincRNA	KNOWN	RP3-473L9.4	2	3	0.538493
chr12	111381867	111385638	111383752	ENSG00000257539.2	+	processed_pseudogene	KNOWN	HSPA8P14	1	5	0.563063
chr12	111405948	111451623	111428785	ENSG00000111252.10	+	protein_coding	KNOWN	SH2B3	3	8	0.827818
chr12	111452214	111599676	111525945	ENSG00000204842.14	-	protein_coding	KNOWN	ATXN2	27	26	0.452323
chr12	111487478	111487578	111487528	ENSG00000266269.1	-	miRNA	NOVEL	AC002395.1	1	1	0.274645
chr12	111564821	111564883	111564852	ENSG00000272215.1	-	snRNA	NOVEL	U7	1	1	0.395998
chr12	111581379	111581773	111581576	ENSG00000238168.5	+	processed_pseudogene	KNOWN	RP11-686G8.1	1	1	0.748615
chr12	111598951	111599031	111598991	ENSG00000281280.1	-	miRNA	NOVEL	AC137055.1	1	1	0.669301
chr12	111599498	111600256	111599877	ENSG00000258099.1	+	antisense	KNOWN	RP11-686G8.2	1	2	0.669301
chr12	111642146	111685986	111664066	ENSG00000089234.15	-	protein_coding	KNOWN	BRAP	3	12	0.457770
chr12	111649573	111649938	111649755	ENSG00000273903.1	+	antisense	KNOWN	RP11-686G8.5	1	1	0.562442
chr12	111669852	111670362	111670107	ENSG00000258359.1	-	processed_pseudogene	KNOWN	PCNPP1	1	1	0.466223
chr12	111686056	111757107	111721581	ENSG00000111271.14	+	protein_coding	KNOWN	ACAD10	24	22	0.413795
chr12	111753890	111791418	111772654	ENSG00000257767.2	+	protein_coding	KNOWN	RP11-162P23.2	1	8	0.563220
chr12	111766887	111817529	111792208	ENSG00000111275.12	+	protein_coding	KNOWN	ALDH2	5	14	0.501373
chr12	111799834	111799905	111799869	ENSG00000274697.1	+	miRNA	KNOWN	MIR6761	1	1	0.447867
chr12	111839764	111842902	111841333	ENSG00000234608.7	-	lincRNA	KNOWN	MAPKAPK5-AS1	7	4	0.372948
chr12	111841978	111902238	111872108	ENSG00000089022.13	+	protein_coding	KNOWN	MAPKAPK5	10	14	0.251326
chr12	111879338	111880249	111879793	ENSG00000244060.2	-	processed_pseudogene	KNOWN	RPS2P41	1	2	0.146440
chr12	111899263	111901391	111900327	ENSG00000229186.4	+	unitary_pseudogene	KNOWN	ADAM1A	1	1	0.198907
chr12	111927018	111929017	111928017	ENSG00000226469.1	+	unitary_pseudogene	KNOWN	ADAM1B	1	1	0.625607
chr12	111931282	112013185	111972233	ENSG00000198270.12	-	protein_coding	KNOWN	TMEM116	18	13	0.261181
chr12	111992996	111993875	111993435	ENSG00000258373.1	+	processed_pseudogene	KNOWN	SLC25A3P2	1	1	0.192059
chr12	112000739	112000985	112000862	ENSG00000257624.1	-	processed_pseudogene	KNOWN	RP1-128M12.3	1	1	0.192059
chr12	112013316	112023451	112018383	ENSG00000089248.6	+	protein_coding	KNOWN	ERP29	5	3	0.484731
chr12	112018804	112019430	112019117	ENSG00000274227.1	-	antisense	KNOWN	RP1-267L14.6	1	1	0.484731
chr12	112026689	112109022	112067855	ENSG00000111300.9	-	protein_coding	KNOWN	NAA25	8	24	0.237933
chr12	112037599	112037715	112037657	ENSG00000266370.1	-	miRNA	KNOWN	MIR3657	1	1	0.184603
chr12	112063909	112065755	112064832	ENSG00000258323.1	+	antisense	KNOWN	RP1-267L14.3	1	2	-0.037519
chr12	112069104	112069209	112069156	ENSG00000200688.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.037519
chr12	112125501	112153609	112139555	ENSG00000135148.11	+	protein_coding	KNOWN	TRAFD1	9	12	0.635417
chr12	112149360	112149472	112149416	ENSG00000200135.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.590654
chr12	112160188	112382439	112271313	ENSG00000173064.10	-	protein_coding	KNOWN	HECTD4	14	76	0.386381
chr12	112163258	112163321	112163289	ENSG00000273826.1	-	miRNA	KNOWN	MIR6861	1	1	0.796749
chr12	112256800	112259091	112257945	ENSG00000257494.1	+	antisense	KNOWN	RP3-521E19.2	1	2	0.281816
chr12	112267077	112267394	112267235	ENSG00000201428.1	+	misc_RNA	KNOWN	RN7SKP71	1	1	0.281816
chr12	112301870	112302663	112302266	ENSG00000213152.5	-	processed_pseudogene	KNOWN	RPL7AP60	1	1	0.323618
chr12	112321759	112323089	112322424	ENSG00000257658.1	+	processed_pseudogene	KNOWN	RP3-521E19.3	1	3	0.426411
chr12	112405190	112418838	112412014	ENSG00000089009.15	-	protein_coding	KNOWN	RPL6	13	7	0.587148
chr12	112418351	112509913	112464132	ENSG00000179295.16	+	protein_coding	KNOWN	PTPN11	6	16	0.290382
chr12	112570380	112898881	112734630	ENSG00000089169.14	+	protein_coding	KNOWN	RPH3A	27	22	-0.096847
chr12	112906777	112933222	112919999	ENSG00000089127.12	+	protein_coding	KNOWN	OAS1	11	6	0.148883
chr12	112907628	113017751	112962689	ENSG00000257452.1	-	antisense	KNOWN	RP1-71H24.1	1	3	0.113688
chr12	112938352	112973249	112955800	ENSG00000111331.12	+	protein_coding	KNOWN	OAS3	7	16	0.046003
chr12	112978395	113011723	112995059	ENSG00000111335.12	+	protein_coding	KNOWN	OAS2	7	12	0.144297
chr12	113015607	113016098	113015852	ENSG00000258159.1	+	processed_pseudogene	KNOWN	IMMP1LP2	1	1	0.286639
chr12	113054062	113054435	113054248	ENSG00000242461.1	+	processed_pseudogene	KNOWN	RPS15AP32	1	1	0.192021
chr12	113056709	113098028	113077368	ENSG00000135144.7	+	protein_coding	KNOWN	DTX1	5	9	0.280187
chr12	113098819	113136239	113117529	ENSG00000111344.11	-	protein_coding	KNOWN	RASAL1	10	22	0.404042
chr12	113149858	113159276	113154567	ENSG00000186710.11	+	protein_coding	KNOWN	CFAP73	3	8	0.404404
chr12	113156763	113156861	113156812	ENSG00000199899.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.408600
chr12	113157174	113185479	113171326	ENSG00000123064.12	-	protein_coding	KNOWN	DDX54	10	20	0.418196
chr12	113159113	113159177	113159145	ENSG00000276908.1	-	miRNA	KNOWN	MIR7106	1	1	0.408600
chr12	113178423	113178519	113178471	ENSG00000201208.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.426146
chr12	113185526	113192368	113188947	ENSG00000139405.15	+	protein_coding	KNOWN	RITA1	4	4	0.535968
chr12	113185624	113192161	113188892	ENSG00000257286.1	-	antisense	KNOWN	RP11-545P7.4	1	2	0.531048
chr12	113195441	113221094	113208267	ENSG00000166578.9	-	protein_coding	KNOWN	IQCD	3	5	0.769150
chr12	113221050	113298585	113259817	ENSG00000186815.12	+	protein_coding	KNOWN	TPCN1	23	29	0.519855
chr12	113249466	113250042	113249754	ENSG00000277566.1	+	sense_intronic	KNOWN	RP11-545P7.9	1	1	0.421691
chr12	113291523	113291608	113291565	ENSG00000274822.1	+	miRNA	KNOWN	MIR6762	1	1	0.729947
chr12	113298759	113359493	113329126	ENSG00000089060.11	-	protein_coding	KNOWN	SLC8B1	16	17	0.594022
chr12	113358566	113391625	113375095	ENSG00000151176.7	+	protein_coding	KNOWN	PLBD2	4	12	0.495847
chr12	113392445	113426301	113409373	ENSG00000135094.10	-	protein_coding	KNOWN	SDS	6	8	0.352626
chr12	113422237	113438276	113430256	ENSG00000139410.14	+	protein_coding	KNOWN	SDSL	6	9	0.363689
chr12	113462034	113472280	113467157	ENSG00000089116.3	-	protein_coding	KNOWN	LHX5	2	5	0.354517
chr12	113472003	113480624	113476313	ENSG00000257935.2	+	antisense	KNOWN	LHX5-AS1	1	2	0.357652
chr12	113679459	113773683	113726571	ENSG00000249550.6	-	lincRNA	KNOWN	LINC01234	5	4	0.158622
chr12	113789542	113789807	113789674	ENSG00000257231.1	-	processed_pseudogene	KNOWN	DYNLL1P4	1	1	0.278870
chr12	113816738	113966371	113891554	ENSG00000122965.10	-	protein_coding	KNOWN	RBM19	7	25	0.442979
chr12	113932569	113937255	113934912	ENSG00000257359.1	+	antisense	KNOWN	RP11-780K2.1	1	2	0.235249
chr12	114077133	114079902	114078517	ENSG00000257603.1	+	lincRNA	KNOWN	RP11-100F15.1	1	2	0.335263
chr12	114080381	114113489	114096935	ENSG00000257997.5	+	lincRNA	KNOWN	RP11-100F15.2	2	4	0.114620
chr12	114097682	114098223	114097952	ENSG00000257300.1	+	processed_pseudogene	KNOWN	HAUS8P1	1	1	0.054517
chr12	114104542	114105931	114105236	ENSG00000257915.1	+	processed_pseudogene	KNOWN	GLULP5	1	1	0.054517
chr12	114238970	114241770	114240370	ENSG00000257476.1	-	lincRNA	KNOWN	RP11-139B1.1	1	2	0.013989
chr12	114340790	114340908	114340849	ENSG00000280861.1	+	miRNA	NOVEL	AC009260.1	1	1	-0.051133
chr12	114353931	114408442	114381186	ENSG00000089225.19	-	protein_coding	KNOWN	TBX5	5	9	0.224597
chr12	114408191	114412831	114410511	ENSG00000255399.3	+	antisense	KNOWN	TBX5-AS1	4	3	0.446904
chr12	114504876	114505187	114505031	ENSG00000222982.1	-	misc_RNA	KNOWN	RN7SKP216	1	1	0.041951
chr12	114548854	114549852	114549353	ENSG00000255830.2	+	processed_pseudogene	KNOWN	RP11-385N17.3	1	2	-0.126507
chr12	114550762	114550849	114550805	ENSG00000265632.1	-	miRNA	NOVEL	AC069240.1	1	1	0.004529
chr12	114588194	114588802	114588498	ENSG00000258244.1	+	processed_pseudogene	KNOWN	OSTF1P1	1	1	0.021602
chr12	114621761	114622922	114622341	ENSG00000258254.1	+	lincRNA	KNOWN	RP11-162N7.1	1	2	0.035724
chr12	114657949	114658062	114658005	ENSG00000199220.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.028638
chr12	114670254	114684164	114677209	ENSG00000135111.14	-	protein_coding	KNOWN	TBX3	5	10	0.616654
chr12	114713811	114767957	114740884	ENSG00000257817.1	+	lincRNA	KNOWN	RP4-601P9.2	1	5	0.446519
chr12	114737704	114737798	114737751	ENSG00000252459.1	+	snoRNA	NOVEL	SNORA27	1	1	0.392651
chr12	114768674	114771851	114770262	ENSG00000257517.1	+	lincRNA	KNOWN	RP4-601P9.1	1	2	0.412493
chr12	114929757	114929935	114929846	ENSG00000274879.1	-	processed_pseudogene	KNOWN	RP11-411G2.1	1	1	0.033889
chr12	115077325	115080153	115078739	ENSG00000257958.1	+	lincRNA	KNOWN	RP11-25E2.1	1	2	0.052679
chr12	115263170	115270596	115266883	ENSG00000257519.1	+	lincRNA	KNOWN	RP11-116D17.2	1	2	0.229007
chr12	115299588	115300708	115300148	ENSG00000271579.1	-	lincRNA	KNOWN	RP11-116D17.3	1	1	0.281470
chr12	115318657	115320405	115319531	ENSG00000276308.1	-	lincRNA	KNOWN	RP11-116D17.4	1	1	-0.212863
chr12	115332146	115332566	115332356	ENSG00000276972.1	-	lincRNA	KNOWN	RP11-116D17.5	1	1	0.346037
chr12	115363012	115364745	115363878	ENSG00000257726.1	+	lincRNA	KNOWN	RP11-116D17.1	1	2	0.050887
chr12	115569664	115581739	115575701	ENSG00000258108.1	+	lincRNA	KNOWN	RP11-1028N23.3	1	6	0.076869
chr12	115576676	115577615	115577145	ENSG00000258280.1	+	lincRNA	KNOWN	RP11-1028N23.2	1	2	0.075782
chr12	115582061	115639734	115610897	ENSG00000257407.1	-	lincRNA	KNOWN	RP11-1028N23.4	2	4	0.276347
chr12	115592604	115592983	115592793	ENSG00000241656.1	-	processed_pseudogene	KNOWN	UBA52P7	1	1	0.471184
chr12	115717725	115718013	115717869	ENSG00000240205.3	+	misc_RNA	KNOWN	RN7SL865P	1	1	0.218210
chr12	115755262	115799936	115777599	ENSG00000257781.1	+	lincRNA	KNOWN	RP11-110L15.1	1	3	-0.038360
chr12	115810359	115886137	115848248	ENSG00000257683.1	-	lincRNA	KNOWN	RP11-110L15.2	1	3	0.097997
chr12	115852648	115852718	115852683	ENSG00000200112.1	-	snoRNA	NOVEL	SNORD56	1	1	0.216798
chr12	115953872	116277338	116115605	ENSG00000123066.7	-	protein_coding	KNOWN	MED13L	10	31	0.038968
chr12	115961187	115962733	115961960	ENSG00000258034.1	+	antisense	KNOWN	RP11-493P1.2	1	2	-0.010819
chr12	116082570	116082676	116082623	ENSG00000200665.1	+	snRNA	KNOWN	RNU6-1188P	1	1	-0.033539
chr12	116148560	116148654	116148607	ENSG00000207967.1	-	miRNA	KNOWN	MIR620	1	1	0.129860
chr12	116169045	116169258	116169151	ENSG00000257979.1	+	processed_pseudogene	KNOWN	SNRPGP18	1	1	0.091992
chr12	116174502	116181295	116177898	ENSG00000258337.1	-	sense_intronic	KNOWN	RP11-115H15.2	1	2	0.119826
chr12	116255883	116255988	116255935	ENSG00000263768.1	-	miRNA	NOVEL	AC060226.1	1	1	-0.138621
chr12	116368764	116389471	116379117	ENSG00000258346.1	+	lincRNA	KNOWN	RP11-148B3.2	1	5	0.275922
chr12	116428252	116428318	116428285	ENSG00000264037.1	-	miRNA	KNOWN	MIR4472-2	1	1	0.487293
chr12	116517858	116518820	116518339	ENSG00000258018.1	+	lincRNA	KNOWN	RP11-148B3.1	1	2	0.622507
chr12	116533422	116536518	116534970	ENSG00000196668.3	+	processed_transcript	KNOWN	LINC00173	4	3	0.465722
chr12	116548105	116576448	116562276	ENSG00000258102.3	+	protein_coding	KNOWN	MAP1LC3B2	4	5	0.583641
chr12	116580974	116583672	116582323	ENSG00000275898.1	+	lincRNA	KNOWN	RP11-497G19.7	1	1	0.091992
chr12	116599270	116603585	116601427	ENSG00000258249.1	+	lincRNA	KNOWN	RP11-497G19.3	1	2	0.613945
chr12	116661582	116698065	116679823	ENSG00000257883.1	+	lincRNA	KNOWN	RP11-497G19.1	1	2	0.217492
chr12	116698336	116703130	116700733	ENSG00000257654.1	+	lincRNA	KNOWN	RP11-497G19.2	1	2	0.278646
chr12	116710185	116738070	116724127	ENSG00000111412.5	-	protein_coding	KNOWN	C12orf49	4	5	0.221230
chr12	116738178	116853631	116795904	ENSG00000135119.14	+	protein_coding	KNOWN	RNFT2	9	12	0.262853
chr12	116755395	116755874	116755634	ENSG00000239374.1	-	processed_pseudogene	KNOWN	RP11-407P2.1	1	1	0.272027
chr12	116782105	116782208	116782156	ENSG00000201382.1	+	snRNA	KNOWN	RNU6-558P	1	1	0.221760
chr12	116801023	116801477	116801250	ENSG00000275467.1	+	lincRNA	KNOWN	RP11-240G22.4	1	1	0.489956
chr12	116856144	116881441	116868792	ENSG00000135116.9	-	protein_coding	KNOWN	HRK	4	5	0.421868
chr12	116908312	116908627	116908469	ENSG00000240100.1	+	processed_pseudogene	KNOWN	RP11-240G22.1	1	1	0.211291
chr12	116910956	117031148	116971052	ENSG00000174989.12	+	protein_coding	KNOWN	FBXW8	3	11	0.169841
chr12	116948738	116951422	116950080	ENSG00000274554.1	-	antisense	KNOWN	RP11-240G22.5	1	1	0.072610
chr12	116977442	116987337	116982389	ENSG00000257279.1	-	antisense	KNOWN	RP11-231I16.1	1	4	0.130881
chr12	117002463	117003152	117002807	ENSG00000277840.1	+	sense_intronic	KNOWN	RP11-103B5.4	1	1	0.069853
chr12	117038923	117099479	117069201	ENSG00000088992.17	-	protein_coding	KNOWN	TESC	8	8	0.302413
chr12	117099481	117142091	117120786	ENSG00000258285.1	+	lincRNA	KNOWN	TESC-AS1	1	3	0.277769
chr12	117141988	117190531	117166259	ENSG00000135108.14	-	protein_coding	KNOWN	FBXO21	8	13	0.219049
chr12	117208142	117452170	117330156	ENSG00000089250.18	-	protein_coding	KNOWN	NOS1	6	31	0.093384
chr12	117245551	117246164	117245857	ENSG00000257465.2	-	processed_pseudogene	KNOWN	TCEB1P32	1	2	0.144459
chr12	117278268	117278361	117278314	ENSG00000281291.1	-	miRNA	NOVEL	AC068799.1	1	1	0.091992
chr12	117453012	117968983	117710997	ENSG00000171435.13	-	protein_coding	KNOWN	KSR2	4	20	-0.038546
chr12	117453012	117456986	117454999	ENSG00000255686.1	+	lincRNA	KNOWN	RP11-227B21.2	1	2	-0.089615
chr12	117557441	117557571	117557506	ENSG00000281843.1	+	miRNA	NOVEL	AC079127.1	1	1	-0.215063
chr12	117889454	117891008	117890231	ENSG00000256071.1	+	antisense	KNOWN	RP11-465L8.1	1	2	-0.161329
chr12	118013588	118033130	118023359	ENSG00000111445.13	+	protein_coding	KNOWN	RFC5	9	12	0.419694
chr12	118024817	118025518	118025167	ENSG00000277873.1	-	antisense	KNOWN	RP11-33N14.3	1	1	0.474079
chr12	118032694	118062430	118047562	ENSG00000176871.8	-	protein_coding	KNOWN	WSB2	12	9	0.196376
chr12	118037869	118038081	118037975	ENSG00000276292.1	+	antisense	KNOWN	RP11-33N14.5	1	1	0.134636
chr12	118063593	118136026	118099809	ENSG00000176834.13	-	protein_coding	KNOWN	VSIG10	13	9	0.330415
chr12	118066398	118066725	118066561	ENSG00000274859.1	+	antisense	KNOWN	RP11-136L23.2	1	1	0.282323
chr12	118135858	118145584	118140721	ENSG00000089220.4	+	protein_coding	KNOWN	PEBP1	2	4	0.486468
chr12	118149801	118372945	118261373	ENSG00000135090.13	-	protein_coding	KNOWN	TAOK3	19	21	0.024205
chr12	118166799	118166875	118166837	ENSG00000221280.2	+	miRNA	NOVEL	AC026366.1	1	1	0.375490
chr12	118246084	118246962	118246523	ENSG00000240342.3	+	processed_pseudogene	KNOWN	RPS2P5	1	1	-0.214435
chr12	118368464	118368558	118368511	ENSG00000278227.1	+	miRNA	NOVEL	AC026367.1	1	1	0.212286
chr12	118375350	118376275	118375812	ENSG00000270482.1	-	lincRNA	KNOWN	RP11-131L12.2	1	2	0.327737
chr12	118376380	118418031	118397205	ENSG00000111707.11	+	protein_coding	KNOWN	SUDS3	4	12	0.195961
chr12	118428281	118428870	118428575	ENSG00000275759.1	+	lincRNA	KNOWN	RP11-131L12.3	1	1	0.062548
chr12	118430147	118430699	118430423	ENSG00000275409.1	+	lincRNA	KNOWN	RP11-131L12.4	1	1	-0.145047
chr12	118645315	118648724	118647019	ENSG00000255714.1	-	lincRNA	KNOWN	RP11-121J20.1	1	3	-0.400068
chr12	118737964	118738511	118738237	ENSG00000241590.1	-	processed_pseudogene	KNOWN	RPL17P37	1	1	0.157209
chr12	118758754	118761679	118760216	ENSG00000256750.1	-	lincRNA	KNOWN	RP11-3L23.2	2	3	-0.248552
chr12	118773032	118775137	118774084	ENSG00000255618.1	-	lincRNA	KNOWN	RP11-357K6.1	1	4	0.060283
chr12	118818804	118833536	118826170	ENSG00000255814.1	-	lincRNA	KNOWN	RP11-357K6.2	1	3	-0.285364
chr12	118829681	118829805	118829743	ENSG00000199809.1	+	rRNA	KNOWN	RNA5SP374	1	1	-0.317121
chr12	118849354	118908930	118879142	ENSG00000256149.1	-	lincRNA	KNOWN	RP11-357K6.3	1	5	-0.265438
chr12	118888434	118888564	118888499	ENSG00000201042.1	-	snoRNA	NOVEL	SNORA38	1	1	-0.217055
chr12	118981495	119163051	119072273	ENSG00000139767.8	+	protein_coding	KNOWN	SRRM4	3	13	-0.136835
chr12	118993857	118994159	118994008	ENSG00000244112.3	+	misc_RNA	KNOWN	RN7SL508P	1	1	-0.201954
chr12	119000776	119001842	119001309	ENSG00000256031.1	+	sense_intronic	KNOWN	RP11-364C11.3	1	3	-0.201954
chr12	119031039	119116961	119074000	ENSG00000257095.1	-	antisense	KNOWN	RP11-364C11.2	1	4	-0.198495
chr12	119174065	119176484	119175274	ENSG00000256884.1	-	antisense	KNOWN	RP11-64B16.3	1	2	0.230968
chr12	119178642	119221131	119199886	ENSG00000152137.6	+	protein_coding	KNOWN	HSPB8	3	4	0.060487
chr12	119182048	119183259	119182653	ENSG00000256609.1	-	antisense	KNOWN	RP11-64B16.4	1	2	0.230968
chr12	119194850	119195394	119195122	ENSG00000213144.2	+	processed_pseudogene	KNOWN	RP11-64B16.2	1	1	-0.041275
chr12	119225834	119259017	119242425	ENSG00000256311.1	-	antisense	KNOWN	RP11-64B16.5	1	5	-0.069719
chr12	119283825	119303380	119293602	ENSG00000281196.1	-	lincRNA	KNOWN	LINC00934	2	4	-0.126784
chr12	119334712	119541047	119437879	ENSG00000183273.6	+	protein_coding	KNOWN	CCDC60	5	14	-0.040769
chr12	119387987	119668079	119528033	ENSG00000248636.6	-	lincRNA	KNOWN	RP11-768F21.1	3	4	-0.051125
chr12	119580792	119580895	119580843	ENSG00000222647.1	+	miRNA	NOVEL	AC002070.1	1	1	-0.317771
chr12	119593459	119643066	119618262	ENSG00000224982.3	+	protein_coding	KNOWN	TMEM233	2	4	-0.053971
chr12	119631090	119631386	119631238	ENSG00000252886.1	-	misc_RNA	KNOWN	RN7SKP197	1	1	-0.035013
chr12	119667753	119681630	119674691	ENSG00000111725.10	+	protein_coding	KNOWN	PRKAB1	10	8	0.242084
chr12	119685790	119877291	119781540	ENSG00000122966.13	-	protein_coding	KNOWN	CIT	19	48	0.240913
chr12	119699768	119701011	119700389	ENSG00000255692.1	+	antisense	KNOWN	RP1-127H14.3	1	2	0.432221
chr12	119713634	119713724	119713679	ENSG00000221323.1	-	miRNA	KNOWN	MIR1178	1	1	0.279807
chr12	119918001	119918375	119918188	ENSG00000279777.1	+	protein_coding	KNOWN	AC004813.1	1	1	0.304295
chr12	119959424	119959754	119959589	ENSG00000226729.3	+	processed_pseudogene	KNOWN	RPL35AP30	1	1	0.162381
chr12	119989869	120094494	120042181	ENSG00000135127.11	+	protein_coding	KNOWN	CCDC64	11	9	0.088047
chr12	120018900	120019261	120019080	ENSG00000278250.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.000037
chr12	120057035	120057180	120057107	ENSG00000255575.1	+	processed_pseudogene	KNOWN	RP1-267D11.1	1	1	-0.022179
chr12	120095095	120117502	120106298	ENSG00000111737.11	-	protein_coding	KNOWN	RAB35	6	7	0.855916
chr12	120116907	120119000	120117953	ENSG00000277283.1	+	antisense	KNOWN	RP1-267D11.6	1	1	0.805111
chr12	120127203	120194710	120160956	ENSG00000089154.10	-	protein_coding	KNOWN	GCN1	9	58	1.019650
chr12	120155434	120155499	120155466	ENSG00000266704.1	-	miRNA	KNOWN	MIR4498	1	1	1.324653
chr12	120172039	120172126	120172082	ENSG00000263913.1	-	miRNA	NOVEL	AC004812.1	1	1	0.964757
chr12	120196686	120201235	120198960	ENSG00000089157.15	-	protein_coding	KNOWN	RPLP0	27	8	0.980023
chr12	120201291	120213138	120207214	ENSG00000255857.5	+	antisense	KNOWN	PXN-AS1	6	5	1.049441
chr12	120210439	120265771	120238105	ENSG00000089159.15	-	protein_coding	KNOWN	PXN	19	14	1.118611
chr12	120224744	120225421	120225082	ENSG00000275936.1	+	antisense	KNOWN	RP1-278C19.8	1	1	1.242017
chr12	120247460	120247791	120247625	ENSG00000240925.1	+	processed_pseudogene	KNOWN	RPS20P31	1	1	1.217855
chr12	120282303	120282716	120282509	ENSG00000123009.4	+	processed_pseudogene	KNOWN	NME2P1	1	1	1.019060
chr12	120291763	120291903	120291833	ENSG00000202538.1	-	snRNA	KNOWN	RNU4-2	1	1	0.792432
chr12	120293097	120293237	120293167	ENSG00000200795.1	-	snRNA	KNOWN	RNU4-1	1	1	0.792432
chr12	120302316	120313249	120307782	ENSG00000089163.4	+	protein_coding	KNOWN	SIRT4	3	4	0.851566
chr12	120313238	120313341	120313289	ENSG00000252659.1	-	snRNA	KNOWN	RNU6-1088P	1	1	0.991359
chr12	120322111	120327789	120324950	ENSG00000170890.13	-	protein_coding	KNOWN	PLA2G1B	3	4	0.991359
chr12	120341330	120369180	120355255	ENSG00000135097.6	-	protein_coding	KNOWN	MSI1	3	15	0.701292
chr12	120369440	120371688	120370564	ENSG00000239881.1	+	transcribed_processed_pseudogene	KNOWN	RPS27P25	2	3	0.517639
chr12	120389546	120395994	120392770	ENSG00000256695.1	+	lincRNA	KNOWN	RP1-166H1.2	1	4	0.552074
chr12	120438090	120440742	120439416	ENSG00000111775.2	+	protein_coding	KNOWN	COX6A1	3	3	0.582797
chr12	120438198	120460006	120449102	ENSG00000111780.8	+	protein_coding	KNOWN	AL021546.6	1	5	0.730536
chr12	120443961	120446412	120445186	ENSG00000170855.3	-	protein_coding	KNOWN	TRIAP1	2	2	0.582797
chr12	120446438	120463749	120455093	ENSG00000257218.5	+	protein_coding	KNOWN	GATC	3	5	0.838530
chr12	120450437	120450803	120450620	ENSG00000219355.2	-	processed_pseudogene	KNOWN	RPL31P52	1	1	0.904760
chr12	120461668	120469793	120465730	ENSG00000111786.8	-	protein_coding	KNOWN	SRSF9	6	5	0.904760
chr12	120469850	120498493	120484171	ENSG00000088986.10	+	protein_coding	KNOWN	DYNLL1	11	6	0.650000
chr12	120490328	120495940	120493134	ENSG00000248008.2	-	antisense	KNOWN	NRAV	1	2	0.642189
chr12	120500735	120501090	120500912	ENSG00000278344.1	-	lincRNA	KNOWN	RP11-18C24.8	1	1	0.642189
chr12	120503274	120534434	120518854	ENSG00000110871.14	-	protein_coding	KNOWN	COQ5	8	7	0.705211
chr12	120504571	120504659	120504615	ENSG00000222601.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.642189
chr12	120522664	120523443	120523053	ENSG00000241030.1	-	processed_pseudogene	KNOWN	RPL29P24	1	2	0.726072
chr12	120533480	120577594	120555537	ENSG00000022840.15	+	protein_coding	KNOWN	RNF10	25	17	0.638383
chr12	120578764	120581398	120580081	ENSG00000167272.10	-	protein_coding	KNOWN	POP5	9	5	0.533427
chr12	120594015	120594548	120594281	ENSG00000242137.1	-	processed_pseudogene	KNOWN	RPL11P5	1	1	0.865716
chr12	120629611	120641591	120635601	ENSG00000256008.2	-	antisense	KNOWN	RP11-728G15.1	2	2	0.672666
chr12	120640552	120667324	120653938	ENSG00000157782.9	+	protein_coding	KNOWN	CABP1	5	7	0.685892
chr12	120686869	120701864	120694366	ENSG00000110917.7	+	protein_coding	KNOWN	MLEC	5	5	0.329644
chr12	120697124	120699541	120698332	ENSG00000256364.1	-	antisense	KNOWN	RP11-173P15.3	2	2	0.312118
chr12	120703867	120704282	120704074	ENSG00000277423.1	+	lincRNA	KNOWN	RP11-173P15.9	1	1	0.312118
chr12	120709112	120709523	120709317	ENSG00000276188.1	+	lincRNA	KNOWN	RP11-173P15.10	1	1	0.312118
chr12	120710435	120723640	120717037	ENSG00000175970.8	+	protein_coding	KNOWN	UNC119B	3	5	0.474789
chr12	120721507	120723639	120722573	ENSG00000256569.1	-	antisense	KNOWN	RP11-173P15.5	1	2	0.474789
chr12	120723193	120723266	120723229	ENSG00000265455.1	+	miRNA	KNOWN	MIR4700	1	1	0.474789
chr12	120725735	120740008	120732871	ENSG00000122971.8	+	protein_coding	KNOWN	ACADS	3	10	0.750029
chr12	120740470	120761592	120751031	ENSG00000255946.1	-	antisense	KNOWN	RP11-173P15.7	1	3	0.684357
chr12	120762510	120904371	120833440	ENSG00000157837.15	-	protein_coding	KNOWN	SPPL3	9	11	0.296173
chr12	120845110	120845647	120845378	ENSG00000213137.3	-	processed_pseudogene	KNOWN	ARF1P2	1	1	0.399420
chr12	120914400	120915123	120914761	ENSG00000231313.2	+	processed_pseudogene	KNOWN	CLIC1P1	1	1	0.746856
chr12	120916745	120917236	120916990	ENSG00000244585.1	+	processed_pseudogene	KNOWN	RPL12P33	1	1	0.746856
chr12	120941728	120980965	120961346	ENSG00000241388.4	-	processed_transcript	KNOWN	HNF1A-AS1	5	4	0.614159
chr12	120978543	121002512	120990527	ENSG00000135100.17	+	protein_coding	KNOWN	HNF1A	16	10	0.712982
chr12	121000486	121016502	121008494	ENSG00000157895.11	-	protein_coding	KNOWN	C12orf43	9	7	0.725936
chr12	121019111	121039242	121029176	ENSG00000135114.12	-	protein_coding	KNOWN	OASL	4	6	0.664142
chr12	121079842	121080124	121079983	ENSG00000256963.1	+	processed_pseudogene	KNOWN	RP11-216P16.4	1	1	0.325582
chr12	121096027	121096429	121096228	ENSG00000279001.1	-	TEC	KNOWN	RP11-216P16.5	1	1	0.246025
chr12	121107043	121107174	121107108	ENSG00000201945.1	+	snoRNA	NOVEL	SNORA70	1	1	0.246025
chr12	121107220	121107490	121107355	ENSG00000223538.2	+	processed_pseudogene	KNOWN	RP11-216P16.6	1	1	0.246025
chr12	121132819	121188032	121160425	ENSG00000089041.16	+	protein_coding	KNOWN	P2RX7	13	14	0.444848
chr12	121149010	121149109	121149059	ENSG00000257053.1	+	processed_pseudogene	KNOWN	Z98941.1	1	1	0.418694
chr12	121190868	121191518	121191193	ENSG00000274029.1	+	lincRNA	KNOWN	RP11-340F14.6	1	1	0.404582
chr12	121209857	121234106	121221981	ENSG00000135124.14	+	protein_coding	KNOWN	P2RX4	14	13	0.652371
chr12	121237691	121298308	121267999	ENSG00000110931.18	-	protein_coding	KNOWN	CAMKK2	16	17	0.793756
chr12	121308245	121399896	121354070	ENSG00000089053.12	-	protein_coding	KNOWN	ANAPC5	22	17	0.558216
chr12	121391962	121399859	121395910	ENSG00000258435.1	+	lincRNA	KNOWN	RP11-711D18.2	1	2	0.730104
chr12	121400041	121430623	121415332	ENSG00000170633.16	+	protein_coding	KNOWN	RNF34	11	7	0.537060
chr12	121429097	121581015	121505056	ENSG00000089094.16	-	protein_coding	KNOWN	KDM2B	19	23	0.671368
chr12	121444273	121444352	121444312	ENSG00000277819.1	-	miRNA	KNOWN	MIR7107	1	1	0.448613
chr12	121580792	121593504	121587148	ENSG00000256742.1	+	lincRNA	KNOWN	RP13-941N14.1	1	2	0.499056
chr12	121604902	121605012	121604957	ENSG00000252393.1	+	snRNA	KNOWN	RNU6-1004P	1	1	0.232473
chr12	121626550	121642677	121634613	ENSG00000276045.1	+	protein_coding	KNOWN	ORAI1	3	3	0.892169
chr12	121648742	121672631	121660686	ENSG00000139714.12	-	protein_coding	KNOWN	MORN3	3	6	0.769496
chr12	121712752	121783001	121747876	ENSG00000188735.12	+	protein_coding	KNOWN	TMEM120B	7	13	0.895877
chr12	121777754	121803403	121790578	ENSG00000139725.7	-	protein_coding	KNOWN	RHOF	7	6	1.033844
chr12	121795267	121803906	121799586	ENSG00000212694.8	-	lincRNA	KNOWN	LINC01089	12	7	1.087532
chr12	121797511	121801972	121799741	ENSG00000272849.1	+	lincRNA	KNOWN	RP11-347I19.8	1	2	1.087532
chr12	121800797	121803403	121802100	ENSG00000274292.1	+	lincRNA	KNOWN	RP11-347I19.7	1	1	1.087532
chr12	121804180	121832584	121818382	ENSG00000139718.10	+	protein_coding	KNOWN	SETD1B	4	18	1.400047
chr12	121839527	121863596	121851561	ENSG00000158104.11	-	protein_coding	KNOWN	HPD	4	15	0.961636
chr12	121856259	121857059	121856659	ENSG00000256811.1	+	antisense	KNOWN	RP11-7M8.2	1	3	0.820965
chr12	121874193	121874337	121874265	ENSG00000278084.1	+	lincRNA	KNOWN	RP11-87C12.6	1	1	0.650802
chr12	121888731	121918297	121903514	ENSG00000110801.13	+	protein_coding	KNOWN	PSMD9	11	7	0.897106
chr12	121888809	121921470	121905139	ENSG00000256950.2	+	protein_coding	KNOWN	RP11-87C12.2	2	4	0.890304
chr12	121908103	121908163	121908133	ENSG00000239082.1	+	snRNA	KNOWN	RNU7-170P	1	1	0.944286
chr12	121917862	122003927	121960894	ENSG00000158023.9	+	protein_coding	KNOWN	WDR66	9	22	0.660074
chr12	122007434	122020063	122013748	ENSG00000255856.2	-	lincRNA	KNOWN	RP11-87C12.5	2	2	0.854789
chr12	122019422	122062044	122040733	ENSG00000110987.8	+	protein_coding	KNOWN	BCL7A	3	6	0.856683
chr12	122063306	122068616	122065961	ENSG00000256546.1	+	processed_transcript	KNOWN	AC156455.1	4	4	0.825053
chr12	122078722	122147347	122113034	ENSG00000175727.13	+	protein_coding	KNOWN	MLXIP	11	17	0.818130
chr12	122167738	122203471	122185604	ENSG00000158113.12	+	protein_coding	KNOWN	LRRC43	6	12	0.736106
chr12	122172030	122174199	122173114	ENSG00000204671.1	-	protein_coding	KNOWN	IL31	1	3	0.664728
chr12	122203543	122208952	122206247	ENSG00000176383.8	+	protein_coding	KNOWN	B3GNT4	6	3	0.846879
chr12	122207662	122227534	122217598	ENSG00000184047.15	-	protein_coding	KNOWN	DIABLO	15	7	0.653486
chr12	122207779	122266423	122237101	ENSG00000256861.1	-	protein_coding	KNOWN	RP11-512M8.5	1	16	0.624498
chr12	122229564	122266521	122248042	ENSG00000139719.9	-	protein_coding	KNOWN	VPS33A	9	14	0.609349
chr12	122255119	122260274	122257696	ENSG00000280389.1	-	TEC	KNOWN	RP11-512M8.11	1	2	0.590540
chr12	122271432	122422632	122347032	ENSG00000130779.19	-	protein_coding	KNOWN	CLIP1	19	26	0.609984
chr12	122322122	122324336	122323229	ENSG00000256304.1	-	processed_pseudogene	KNOWN	CCDC150P1	1	1	0.765491
chr12	122364780	122365629	122365204	ENSG00000214760.2	+	processed_pseudogene	KNOWN	RPL21P1	1	2	0.713480
chr12	122395542	122400857	122398199	ENSG00000257097.1	+	lincRNA	KNOWN	CLIP1-AS1	2	3	0.634947
chr12	122471600	122501073	122486336	ENSG00000033030.13	-	protein_coding	KNOWN	ZCCHC8	10	14	0.697031
chr12	122492113	122492241	122492177	ENSG00000252192.1	-	snoRNA	NOVEL	SNORA9	1	1	0.628374
chr12	122501187	122501641	122501414	ENSG00000275265.1	+	lincRNA	KNOWN	RP11-15J22.8	1	1	0.628374
chr12	122503458	122527000	122515229	ENSG00000111011.17	-	protein_coding	KNOWN	RSRC2	20	11	0.440850
chr12	122527246	122626396	122576821	ENSG00000184445.11	+	protein_coding	KNOWN	KNTC1	15	64	0.328787
chr12	122563735	122563762	122563748	ENSG00000255972.1	-	processed_pseudogene	KNOWN	RP11-324E6.8	1	1	0.217523
chr12	122634130	122634673	122634401	ENSG00000274191.1	+	lincRNA	KNOWN	RP11-324E6.10	1	1	0.412212
chr12	122687125	122715979	122701552	ENSG00000256249.1	+	lincRNA	KNOWN	RP11-324E6.6	2	3	0.550045
chr12	122701293	122703343	122702318	ENSG00000182782.7	-	protein_coding	KNOWN	HCAR2	1	1	0.596612
chr12	122714756	122716892	122715824	ENSG00000255398.2	-	protein_coding	KNOWN	HCAR3	1	1	0.383758
chr12	122726076	122730843	122728459	ENSG00000196917.5	-	protein_coding	KNOWN	HCAR1	1	1	0.410449
chr12	122749481	122749586	122749533	ENSG00000256044.1	-	processed_pseudogene	KNOWN	RP11-324E6.4	1	1	0.534510
chr12	122752774	122771064	122761919	ENSG00000139726.10	+	protein_coding	KNOWN	DENR	4	8	0.476984
chr12	122768099	122768200	122768149	ENSG00000206914.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.473671
chr12	122774327	122827528	122800927	ENSG00000130783.13	+	protein_coding	KNOWN	CCDC62	6	13	0.471219
chr12	122834453	122862960	122848706	ENSG00000130787.13	+	protein_coding	KNOWN	HIP1R	10	32	0.696017
chr12	122865328	122896444	122880886	ENSG00000139722.6	-	protein_coding	KNOWN	VPS37B	4	4	0.861683
chr12	122865335	122867021	122866178	ENSG00000256152.2	+	lincRNA	KNOWN	RP11-463O12.3	1	2	0.936442
chr12	122870059	122888720	122879389	ENSG00000280138.1	-	TEC	KNOWN	RP11-463O12.5	1	1	0.961769
chr12	122920951	122981649	122951300	ENSG00000150967.17	-	protein_coding	KNOWN	ABCB9	21	12	0.651939
chr12	122974580	122980043	122977311	ENSG00000111325.16	+	protein_coding	KNOWN	OGFOD2	25	8	0.778101
chr12	122975320	122982907	122979113	ENSG00000256028.2	+	processed_transcript	KNOWN	RP11-197N18.2	1	7	0.778101
chr12	122980060	122982913	122981486	ENSG00000182196.13	+	protein_coding	KNOWN	ARL6IP4	20	6	0.778101
chr12	122983480	123150015	123066747	ENSG00000090975.12	-	protein_coding	KNOWN	PITPNM2	9	25	0.763711
chr12	123010667	123010728	123010697	ENSG00000265526.1	-	miRNA	KNOWN	MIR4304	1	1	0.801599
chr12	123081384	123084744	123083064	ENSG00000251497.2	+	lincRNA	KNOWN	RP11-197N18.7	2	3	0.992754
chr12	123087256	123092821	123090038	ENSG00000280381.1	-	TEC	KNOWN	RP11-197N18.8	1	1	0.830145
chr12	123152320	123244014	123198167	ENSG00000051825.14	-	protein_coding	KNOWN	MPHOSPH9	24	24	0.435143
chr12	123152324	123153377	123152850	ENSG00000280120.1	-	TEC	KNOWN	RP11-546D6.3	1	1	0.555939
chr12	123232916	123257959	123245437	ENSG00000130921.7	+	protein_coding	KNOWN	C12orf65	8	3	0.616073
chr12	123252030	123261483	123256756	ENSG00000235423.8	-	antisense	KNOWN	RP11-282O18.3	4	5	0.632560
chr12	123260971	123272334	123266652	ENSG00000111328.6	-	protein_coding	KNOWN	CDK2AP1	7	4	0.699652
chr12	123262060	123262402	123262231	ENSG00000269980.1	+	antisense	KNOWN	RP11-282O18.7	1	1	0.632560
chr12	123282916	123283034	123282975	ENSG00000199845.1	-	rRNA	KNOWN	RNA5SP375	1	1	0.959053
chr12	123289109	123364843	123326976	ENSG00000139697.11	-	protein_coding	KNOWN	SBNO1	3	32	0.512447
chr12	123348999	123349100	123349049	ENSG00000207189.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.446769
chr12	123363868	123366113	123364990	ENSG00000256092.2	+	lincRNA	KNOWN	RP13-942N8.1	2	2	0.434725
chr12	123364764	123364843	123364803	ENSG00000277700.1	-	miRNA	KNOWN	MIR8072	1	1	0.434725
chr12	123383773	123409358	123396565	ENSG00000183955.12	+	protein_coding	KNOWN	SETD8	9	9	0.794368
chr12	123410683	123436717	123423700	ENSG00000150977.10	-	protein_coding	KNOWN	RILPL2	1	4	1.001666
chr12	123441517	123441852	123441684	ENSG00000270445.1	-	processed_pseudogene	KNOWN	RP11-972P1.8	1	1	1.057503
chr12	123457641	123473154	123465397	ENSG00000184209.14	+	protein_coding	KNOWN	SNRNP35	6	2	0.516296
chr12	123470054	123533718	123501886	ENSG00000188026.11	-	protein_coding	KNOWN	RILPL1	3	7	0.760325
chr12	123472200	123476093	123474146	ENSG00000280328.1	-	TEC	KNOWN	RP11-972P1.7	1	1	0.700971
chr12	123515275	123515513	123515394	ENSG00000274427.1	-	sense_intronic	KNOWN	RP11-972P1.10	1	1	0.837571
chr12	123519390	123519856	123519623	ENSG00000278112.1	-	sense_intronic	KNOWN	RP11-972P1.11	1	1	0.837571
chr12	123536409	123536534	123536471	ENSG00000266655.1	+	miRNA	KNOWN	MIR3908	1	1	0.696583
chr12	123575891	123585115	123580503	ENSG00000247373.3	-	lincRNA	KNOWN	RP11-486O12.2	1	3	0.676954
chr12	123584531	123598577	123591554	ENSG00000086598.10	+	protein_coding	KNOWN	TMED2	5	4	0.687765
chr12	123602077	123620941	123611509	ENSG00000111364.15	+	protein_coding	KNOWN	DDX55	13	14	0.774756
chr12	123616708	123616840	123616774	ENSG00000206897.1	+	snoRNA	NOVEL	SNORA9	1	1	0.832749
chr12	123620406	123633766	123627086	ENSG00000111361.12	-	protein_coding	KNOWN	EIF2B1	6	9	0.795008
chr12	123633739	123662606	123648172	ENSG00000111358.13	+	protein_coding	KNOWN	GTF2H3	14	13	0.618613
chr12	123649068	123650485	123649776	ENSG00000279953.1	+	TEC	KNOWN	RP11-338K17.5	1	1	0.635847
chr12	123655528	123656128	123655828	ENSG00000278861.1	+	TEC	KNOWN	RP11-338K17.6	1	1	0.515067
chr12	123671113	123708403	123689758	ENSG00000168778.11	+	protein_coding	KNOWN	TCTN2	4	18	0.524946
chr12	123707602	123708386	123707994	ENSG00000255839.1	-	lincRNA	KNOWN	RP11-338K17.8	1	2	0.486468
chr12	123712318	123761755	123737036	ENSG00000185344.13	+	protein_coding	KNOWN	ATP6V0A2	9	20	0.483190
chr12	123721246	123721639	123721442	ENSG00000239215.1	-	processed_pseudogene	KNOWN	RPL27P12	1	1	0.599878
chr12	123754246	123754794	123754520	ENSG00000280300.1	-	TEC	KNOWN	RP11-338K17.10	1	1	0.476851
chr12	123762188	123936206	123849197	ENSG00000197653.14	+	protein_coding	KNOWN	DNAH10	9	78	0.430111
chr12	123918660	123972831	123945745	ENSG00000119242.8	-	protein_coding	KNOWN	CCDC92	9	7	0.620468
chr12	123925461	123926083	123925772	ENSG00000270028.1	-	antisense	KNOWN	RP11-380L11.4	1	1	0.738593
chr12	123926424	123934984	123930704	ENSG00000250091.2	-	protein_coding	KNOWN	DNAH10OS	1	2	0.791217
chr12	123960717	123961244	123960980	ENSG00000270130.1	-	sense_intronic	KNOWN	RP11-214K3.23	1	1	0.415399
chr12	123962555	123962817	123962686	ENSG00000270048.1	-	sense_intronic	KNOWN	RP11-214K3.22	1	1	0.415399
chr12	123966077	123966629	123966353	ENSG00000269997.1	-	sense_intronic	KNOWN	RP11-214K3.21	1	1	0.415399
chr12	123968023	123968579	123968301	ENSG00000269938.1	-	sense_intronic	KNOWN	RP11-214K3.20	1	1	0.415399
chr12	123969990	123970344	123970167	ENSG00000270061.1	-	sense_intronic	KNOWN	RP11-214K3.19	1	1	0.130781
chr12	123971457	123971714	123971585	ENSG00000270095.1	-	sense_intronic	KNOWN	RP11-214K3.18	1	1	0.123356
chr12	123971845	124015439	123993642	ENSG00000179195.15	+	protein_coding	KNOWN	ZNF664	14	6	0.274100
chr12	123973241	124316024	124144632	ENSG00000178882.14	+	protein_coding	KNOWN	FAM101A	5	5	0.483720
chr12	123973944	124088594	124031269	ENSG00000274874.1	+	protein_coding	KNOWN	RP11-214K3.25	1	3	0.432821
chr12	124005871	124006225	124006048	ENSG00000256827.1	-	processed_pseudogene	KNOWN	RP11-214K3.5	1	1	0.370807
chr12	124085761	124088598	124087179	ENSG00000275389.1	+	lincRNA	KNOWN	RP11-214K3.24	1	1	0.451779
chr12	124206228	124209018	124207623	ENSG00000256596.1	+	lincRNA	KNOWN	RP11-522N14.2	1	2	0.395668
chr12	124324415	124567589	124446002	ENSG00000196498.13	-	protein_coding	KNOWN	NCOR2	24	47	1.097712
chr12	124337181	124337242	124337211	ENSG00000275967.1	-	miRNA	KNOWN	MIR6880	1	1	1.453547
chr12	124383381	124383510	124383445	ENSG00000255965.1	+	processed_pseudogene	KNOWN	RP11-408I18.9	1	1	1.319496
chr12	124513222	124514813	124514017	ENSG00000214650.2	+	lincRNA	KNOWN	RP11-83B20.1	1	2	1.046968
chr12	124529722	124530228	124529975	ENSG00000279527.1	-	TEC	KNOWN	RP11-83B20.2	1	1	0.920737
chr12	124537844	124539677	124538760	ENSG00000279071.1	+	TEC	KNOWN	RP11-83B20.3	1	1	0.768047
chr12	124542503	124542873	124542688	ENSG00000280354.1	+	TEC	KNOWN	RP11-83B20.4	1	1	0.768047
chr12	124555905	124556432	124556168	ENSG00000279121.1	+	TEC	KNOWN	RP11-83B20.5	1	1	0.896596
chr12	124561869	124562283	124562076	ENSG00000279334.1	+	TEC	KNOWN	RP11-83B20.6	1	1	0.896596
chr12	124593181	124593691	124593436	ENSG00000280097.1	-	TEC	KNOWN	RP11-83B20.7	1	1	0.770064
chr12	124622290	124623069	124622679	ENSG00000278973.1	-	TEC	KNOWN	RP11-83B20.9	1	1	0.868159
chr12	124623391	124623987	124623689	ENSG00000280444.1	+	TEC	KNOWN	RP11-83B20.8	1	1	0.868159
chr12	124637999	124638444	124638221	ENSG00000279087.1	-	TEC	KNOWN	RP11-83B20.10	1	1	0.833680
chr12	124725524	124725934	124725729	ENSG00000279931.1	+	TEC	KNOWN	RP11-13J12.2	1	1	0.907960
chr12	124776856	124882668	124829762	ENSG00000073060.15	-	protein_coding	KNOWN	SCARB1	11	13	0.737153
chr12	124901512	124901611	124901561	ENSG00000252008.1	+	snRNA	KNOWN	RNU6-927P	1	1	0.760072
chr12	124911604	124917368	124914486	ENSG00000150991.14	-	protein_coding	KNOWN	UBC	14	4	0.747206
chr12	124915547	124915659	124915603	ENSG00000265345.1	+	miRNA	KNOWN	MIR5188	1	1	0.747206
chr12	124935455	124935895	124935675	ENSG00000241129.3	-	transcribed_processed_pseudogene	KNOWN	RPL22P19	2	1	1.119265
chr12	124946825	124989122	124967973	ENSG00000150990.7	-	protein_coding	KNOWN	DHX37	6	27	0.835880
chr12	124993700	125031231	125012465	ENSG00000184992.10	+	protein_coding	KNOWN	BRI3BP	1	3	0.576335
chr12	125025434	125027410	125026422	ENSG00000280634.1	-	antisense	KNOWN	THRIL	1	1	0.467501
chr12	125056359	125056581	125056470	ENSG00000256093.1	-	processed_pseudogene	KNOWN	RP11-158L12.2	1	1	0.211573
chr12	125065379	125143333	125104356	ENSG00000081760.16	+	protein_coding	KNOWN	AACS	12	18	0.521119
chr12	125138245	125141711	125139978	ENSG00000279233.1	+	TEC	KNOWN	RP11-158L12.4	1	1	0.555299
chr12	125150058	125151394	125150726	ENSG00000256814.1	+	lincRNA	KNOWN	RP11-158L12.5	1	2	-0.038902
chr12	125160525	125164918	125162721	ENSG00000280117.1	+	TEC	KNOWN	RP11-158L12.6	1	1	-0.038902
chr12	125186836	125662377	125424606	ENSG00000139364.10	+	protein_coding	KNOWN	TMEM132B	6	9	-0.081687
chr12	125300936	125301917	125301426	ENSG00000279462.1	+	TEC	KNOWN	RP11-604N13.1	1	1	0.055280
chr12	125808668	125809808	125809238	ENSG00000280125.1	+	TEC	KNOWN	RP4-800O15.1	1	1	-0.337692
chr12	125858862	125861119	125859990	ENSG00000280415.1	+	TEC	KNOWN	RP4-800O15.2	1	1	-0.263592
chr12	125900421	125901483	125900952	ENSG00000271184.1	-	processed_pseudogene	KNOWN	RP4-800O15.3	1	1	0.109479
chr12	125958688	125983374	125971031	ENSG00000249267.6	-	lincRNA	KNOWN	LINC00939	3	6	-0.290799
chr12	125983702	125986234	125984968	ENSG00000256276.1	+	lincRNA	KNOWN	RP5-916L7.2	1	3	-0.284313
chr12	126032995	126043485	126038240	ENSG00000275212.1	+	lincRNA	KNOWN	RP3-446N13.5	1	3	-0.250114
chr12	126095992	126103935	126099963	ENSG00000256342.1	+	lincRNA	KNOWN	RP3-446N13.1	1	5	0.057640
chr12	126106459	126107047	126106753	ENSG00000280364.1	-	TEC	KNOWN	RP3-446N13.2	1	1	0.057640
chr12	126130166	126130865	126130515	ENSG00000280398.1	-	TEC	KNOWN	RP3-446N13.3	1	1	-0.462320
chr12	126141952	126142377	126142164	ENSG00000280272.1	+	TEC	KNOWN	RP3-446N13.4	1	1	-0.462320
chr12	126168235	126171666	126169950	ENSG00000256763.1	+	lincRNA	KNOWN	RP1-116K23.1	1	4	-0.401464
chr12	126191378	126225314	126208346	ENSG00000255778.1	+	lincRNA	KNOWN	RP4-765H13.1	1	2	0.019277
chr12	126358034	126358896	126358465	ENSG00000257061.1	+	lincRNA	KNOWN	RP4-809F18.2	1	2	0.194803
chr12	126359302	126361065	126360183	ENSG00000255595.1	+	lincRNA	KNOWN	RP4-809F18.1	1	2	0.194803
chr12	126400792	126405528	126403160	ENSG00000256494.1	-	lincRNA	KNOWN	RP5-944M2.1	1	2	0.018928
chr12	126425990	126434008	126429999	ENSG00000256927.1	+	lincRNA	KNOWN	RP5-944M2.2	1	3	-0.283193
chr12	126442481	126472790	126457635	ENSG00000214043.7	+	lincRNA	KNOWN	RP5-944M2.3	5	12	-0.006160
chr12	126458462	126458792	126458627	ENSG00000256125.1	-	processed_pseudogene	KNOWN	RP5-944M2.4	1	1	0.075962
chr12	126510910	126511711	126511310	ENSG00000255853.1	-	processed_pseudogene	KNOWN	RP11-407A16.1	1	1	-0.678983
chr12	126524248	126524626	126524437	ENSG00000256310.1	+	processed_pseudogene	KNOWN	NDUFA5P6	1	1	-0.678983
chr12	126610034	126690318	126650176	ENSG00000256732.1	-	lincRNA	KNOWN	RP11-407A16.3	4	3	-0.097924
chr12	126616344	126616554	126616449	ENSG00000255900.1	-	processed_pseudogene	KNOWN	RP11-407A16.8	1	1	-0.120815
chr12	126628172	126690322	126659247	ENSG00000255944.1	-	lincRNA	KNOWN	RP11-407A16.4	1	3	-0.091247
chr12	126675895	126676243	126676069	ENSG00000278866.1	-	TEC	KNOWN	RP11-407A16.6	1	1	-0.175630
chr12	126677262	126677806	126677534	ENSG00000279171.1	+	TEC	KNOWN	RP11-407A16.5	1	1	-0.175630
chr12	126690479	126695832	126693155	ENSG00000255998.1	+	lincRNA	KNOWN	RP11-407A16.7	2	3	-0.155492
chr12	126726270	126746252	126736261	ENSG00000189238.5	+	lincRNA	KNOWN	LINC00943	8	4	-0.108696
chr12	126729787	126772411	126751099	ENSG00000256128.5	-	lincRNA	KNOWN	LINC00944	6	6	-0.183363
chr12	126864465	126865422	126864943	ENSG00000255923.1	+	processed_pseudogene	KNOWN	RP11-983C2.1	1	1	-0.411775
chr12	126869490	126874690	126872090	ENSG00000249873.6	-	lincRNA	KNOWN	RP11-983C2.2	3	3	-0.149933
chr12	126874821	126876232	126875526	ENSG00000256286.1	+	lincRNA	KNOWN	RP11-983C2.3	1	2	-0.121522
chr12	126912034	126912322	126912178	ENSG00000257021.1	+	processed_pseudogene	KNOWN	HSPE1P20	1	1	-0.361265
chr12	126915203	127060401	126987802	ENSG00000249345.6	-	lincRNA	KNOWN	RP11-575F12.1	3	7	-0.189469
chr12	127145072	127146532	127145802	ENSG00000256001.1	-	lincRNA	KNOWN	RP11-575F12.2	2	3	0.028266
chr12	127147149	127150081	127148615	ENSG00000278266.1	+	lincRNA	KNOWN	RP11-575F12.3	1	1	0.032508
chr12	127166071	127166127	127166099	ENSG00000239776.2	-	miRNA	NOVEL	AC079949.1	1	1	0.179939
chr12	127274467	127284283	127279375	ENSG00000256292.1	-	lincRNA	KNOWN	RP11-955H22.1	1	4	0.280144
chr12	127317709	127319986	127318847	ENSG00000256496.1	-	unprocessed_pseudogene	KNOWN	RP11-955H22.4	1	4	0.144733
chr12	127321355	127321529	127321442	ENSG00000253089.1	+	snRNA	KNOWN	RNU1-104P	1	1	0.144733
chr12	127324155	127340072	127332113	ENSG00000256362.1	-	lincRNA	KNOWN	RP11-955H22.3	1	3	0.001222
chr12	127344258	127344402	127344330	ENSG00000256502.1	-	processed_pseudogene	KNOWN	RP11-955H22.2	1	1	-0.082038
chr12	127372243	127372669	127372456	ENSG00000280024.1	+	TEC	KNOWN	RP11-367G12.1	1	1	-0.032815
chr12	127462507	127463197	127462852	ENSG00000279952.1	+	TEC	KNOWN	RP11-483I24.1	1	1	0.268149
chr12	127598168	127599715	127598941	ENSG00000255945.1	+	lincRNA	KNOWN	RP11-351O2.1	1	2	-0.251416
chr12	127619336	127619447	127619391	ENSG00000199584.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.106865
chr12	127624153	127626267	127625210	ENSG00000257035.1	+	unprocessed_pseudogene	KNOWN	RP11-351O2.2	1	3	0.106865
chr12	127631248	127636467	127633857	ENSG00000256022.5	-	lincRNA	KNOWN	RP11-526P6.1	3	4	-0.004970
chr12	127793527	127821183	127807355	ENSG00000256922.1	-	lincRNA	KNOWN	RP11-749H20.1	1	3	-0.166952
chr12	127825938	127826286	127826112	ENSG00000279475.1	-	TEC	KNOWN	RP11-749H20.2	1	1	-0.149714
chr12	127876999	127877516	127877257	ENSG00000255757.1	-	processed_pseudogene	KNOWN	RP11-749H20.3	1	1	-0.263273
chr12	127881617	127898639	127890128	ENSG00000256597.2	+	lincRNA	KNOWN	FLJ37505	2	3	-0.186033
chr12	127915372	127951552	127933462	ENSG00000256193.5	+	lincRNA	KNOWN	LINC00507	3	4	-0.309228
chr12	127940595	127950160	127945377	ENSG00000256971.1	-	lincRNA	KNOWN	LINC00508	1	2	-0.246836
chr12	128023788	128027166	128025477	ENSG00000256643.1	-	lincRNA	KNOWN	RP11-349K16.1	1	3	-0.315512
chr12	128086985	128118132	128102558	ENSG00000256551.1	-	lincRNA	KNOWN	RP13-653N12.1	2	4	-0.242909
chr12	128118217	128121952	128120084	ENSG00000256659.1	+	lincRNA	KNOWN	RP13-653N12.2	1	3	0.019641
chr12	128187934	128191389	128189661	ENSG00000276487.1	-	lincRNA	KNOWN	RP11-417O18.2	2	2	-0.129626
chr12	128244506	128244573	128244539	ENSG00000265061.1	+	miRNA	KNOWN	MIR4419B	1	1	0.011821
chr12	128267403	128707915	128487659	ENSG00000181234.9	+	protein_coding	KNOWN	TMEM132C	1	9	0.015600
chr12	128288159	128289056	128288607	ENSG00000279180.1	+	TEC	KNOWN	RP11-417O18.1	1	1	0.043629
chr12	128294092	128294178	128294135	ENSG00000265635.1	+	miRNA	KNOWN	MIR3612	1	1	-0.096275
chr12	128399978	128404814	128402396	ENSG00000257025.1	+	sense_intronic	KNOWN	RP11-553N19.1	1	2	0.012425
chr12	128437778	128439206	128438492	ENSG00000256630.1	-	unprocessed_pseudogene	KNOWN	RP11-428I12.1	1	2	-0.048669
chr12	128669880	128669974	128669927	ENSG00000221749.1	-	miRNA	NOVEL	AC107020.1	1	1	0.282747
chr12	128793191	128823983	128808587	ENSG00000139370.10	-	protein_coding	KNOWN	SLC15A4	9	8	0.218407
chr12	128813186	128814750	128813968	ENSG00000279500.1	-	TEC	KNOWN	RP11-21K12.2	1	1	0.032491
chr12	128826836	128827579	128827207	ENSG00000274695.1	+	lincRNA	KNOWN	RP11-21K12.3	1	1	0.032491
chr12	128853427	128984968	128919197	ENSG00000151948.11	+	protein_coding	KNOWN	GLT1D1	6	13	0.013049
chr12	128944274	128945203	128944738	ENSG00000255838.1	-	unprocessed_pseudogene	KNOWN	RP11-753B7.2	1	2	0.009530
chr12	129013336	129016663	129014999	ENSG00000256581.1	+	unprocessed_pseudogene	KNOWN	NLRP9P	1	2	0.274195
chr12	129071725	129903666	129487695	ENSG00000151952.14	-	protein_coding	KNOWN	TMEM132D	3	9	-0.121588
chr12	129109629	129113294	129111461	ENSG00000249196.6	+	antisense	KNOWN	RP11-669N7.2	7	4	0.370853
chr12	129170092	129170238	129170165	ENSG00000277217.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.120815
chr12	129208601	129212662	129210631	ENSG00000256699.1	+	lincRNA	KNOWN	RP11-669N7.3	1	5	-0.064264
chr12	129262345	129262824	129262584	ENSG00000280051.1	+	TEC	KNOWN	RP11-206B11.1	1	1	-0.248552
chr12	129521303	129522763	129522033	ENSG00000256085.1	-	lincRNA	KNOWN	RP11-337L12.1	1	2	-0.239459
chr12	129681427	129698227	129689827	ENSG00000256137.1	-	lincRNA	KNOWN	RP11-174M13.2	1	3	-0.180181
chr12	129839928	129840522	129840225	ENSG00000280196.1	-	TEC	KNOWN	RP11-572C21.2	1	1	-0.245878
chr12	129852208	129854944	129853576	ENSG00000251536.2	-	lincRNA	KNOWN	RP11-572C21.1	1	2	-0.051133
chr12	130024493	130044956	130034724	ENSG00000261650.1	-	lincRNA	KNOWN	RP11-474D1.4	1	3	0.062803
chr12	130033454	130045057	130039255	ENSG00000214039.8	-	lincRNA	KNOWN	RP11-474D1.3	2	3	0.028566
chr12	130047132	130048376	130047754	ENSG00000256298.1	+	lincRNA	KNOWN	RP11-474D1.1	1	2	0.028566
chr12	130070325	130072685	130071505	ENSG00000256906.1	+	lincRNA	KNOWN	RP11-474D1.2	1	2	-0.056605
chr12	130121925	130122974	130122449	ENSG00000279193.1	-	TEC	KNOWN	RP11-143E21.2	1	1	-0.028302
chr12	130138693	130140768	130139730	ENSG00000276122.1	+	lincRNA	KNOWN	RP11-143E21.3	1	1	0.162381
chr12	130144315	130162256	130153285	ENSG00000250208.6	-	processed_transcript	KNOWN	FZD10-AS1	4	4	0.063476
chr12	130144954	130145691	130145322	ENSG00000280405.1	+	TEC	KNOWN	RP11-143E21.4	1	1	0.162381
chr12	130162459	130165740	130164099	ENSG00000111432.4	+	protein_coding	KNOWN	FZD10	2	1	0.017610
chr12	130216807	130217157	130216982	ENSG00000242963.1	-	processed_pseudogene	KNOWN	RP11-143E21.1	1	1	0.031238
chr12	130249679	130266725	130258202	ENSG00000259862.1	+	lincRNA	KNOWN	RP11-143E21.6	1	2	0.134605
chr12	130337887	130372637	130355262	ENSG00000125207.7	+	protein_coding	KNOWN	PIWIL1	8	21	0.055087
chr12	130350996	130351707	130351351	ENSG00000279343.1	-	TEC	KNOWN	RP11-200K12.3	1	1	0.126757
chr12	130383364	130383890	130383627	ENSG00000279478.1	+	TEC	KNOWN	RP11-200K12.2	1	1	-0.288488
chr12	130396137	130716281	130556209	ENSG00000060709.13	-	protein_coding	KNOWN	RIMBP2	6	19	0.220700
chr12	130419535	130421019	130420277	ENSG00000256064.1	-	lincRNA	KNOWN	RP11-117L5.4	1	2	-0.060011
chr12	130425004	130430661	130427832	ENSG00000279905.1	+	TEC	KNOWN	RP11-117L5.1	1	1	-0.014785
chr12	130465008	130466315	130465661	ENSG00000279146.1	-	TEC	KNOWN	RP11-117L5.3	1	1	0.695102
chr12	130628316	130716281	130672298	ENSG00000256725.1	-	lincRNA	KNOWN	RP11-662M24.2	2	2	0.290525
chr12	130651371	130669233	130660302	ENSG00000256343.7	+	lincRNA	KNOWN	RP11-662M24.1	4	6	0.607269
chr12	130775694	130776546	130776120	ENSG00000279650.1	-	TEC	KNOWN	RP11-989F5.4	1	1	0.279807
chr12	130789600	130839266	130814433	ENSG00000111450.13	-	protein_coding	KNOWN	STX2	4	11	0.338954
chr12	130810606	130812438	130811522	ENSG00000256250.1	+	lincRNA	KNOWN	RP11-989F5.1	1	2	0.392651
chr12	130810821	130812622	130811721	ENSG00000256299.1	-	lincRNA	KNOWN	RP11-989F5.3	1	2	0.392651
chr12	130869736	130869837	130869786	ENSG00000222438.1	-	snRNA	KNOWN	RNU6-1077P	1	1	-0.054229
chr12	130871879	130877678	130874778	ENSG00000132341.11	+	protein_coding	KNOWN	RAN	12	8	0.551423
chr12	130906838	130906949	130906893	ENSG00000206850.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.226641
chr12	130953907	131141469	131047688	ENSG00000111452.12	+	protein_coding	KNOWN	ADGRD1	16	26	0.309342
chr12	130956384	130958031	130957207	ENSG00000279940.1	-	TEC	KNOWN	RP11-243M5.5	1	1	0.397978
chr12	130962175	130963028	130962601	ENSG00000279976.1	+	TEC	KNOWN	RP11-243M5.4	1	1	0.397978
chr12	130976786	130978812	130977799	ENSG00000280200.1	+	TEC	KNOWN	RP11-243M5.2	1	1	0.266388
chr12	130977562	130978768	130978165	ENSG00000256204.1	+	lincRNA	KNOWN	RP11-243M5.1	1	2	0.266388
chr12	130980667	130981367	130981017	ENSG00000279581.1	-	TEC	KNOWN	RP11-243M5.3	1	1	0.266388
chr12	130988312	130990028	130989170	ENSG00000280002.1	-	TEC	KNOWN	RP11-76C10.6	1	1	0.262227
chr12	130990138	130993976	130992057	ENSG00000256151.1	-	lincRNA	KNOWN	RP11-76C10.5	2	3	0.020201
chr12	131022769	131024741	131023755	ENSG00000279128.1	-	TEC	KNOWN	RP11-76C10.4	1	1	0.487221
chr12	131025561	131028060	131026810	ENSG00000279993.1	-	TEC	KNOWN	RP11-76C10.3	1	1	0.487221
chr12	131030570	131035487	131033028	ENSG00000256810.1	-	lincRNA	KNOWN	RP11-76C10.2	1	2	0.308979
chr12	131165011	131212931	131188971	ENSG00000204603.6	+	lincRNA	KNOWN	LINC01257	2	5	-0.071678
chr12	131235511	131237523	131236517	ENSG00000280217.1	+	TEC	KNOWN	RP11-638F5.2	1	1	0.234680
chr12	131292068	131293176	131292622	ENSG00000226356.2	-	unprocessed_pseudogene	KNOWN	RPS6P20	1	1	0.490541
chr12	131295522	131298218	131296870	ENSG00000279746.1	+	TEC	KNOWN	RP11-495K9.2	1	1	0.490541
chr12	131296110	131297972	131297041	ENSG00000248703.2	-	lincRNA	KNOWN	RP11-495K9.3	1	2	0.490541
chr12	131299640	131299751	131299695	ENSG00000212251.1	-	rRNA	KNOWN	RNA5SP376	1	1	0.490541
chr12	131347470	131367555	131357512	ENSG00000230294.4	+	lincRNA	KNOWN	RP13-507P19.2	1	3	0.357025
chr12	131366660	131371059	131368859	ENSG00000256484.1	+	lincRNA	KNOWN	RP13-507P19.1	1	2	0.286881
chr12	131436447	131436960	131436703	ENSG00000280319.1	+	TEC	KNOWN	RP11-897M7.3	1	1	0.217523
chr12	131447337	131455436	131451386	ENSG00000275232.1	-	lincRNA	KNOWN	RP11-897M7.4	1	5	0.350403
chr12	131469311	131492951	131481131	ENSG00000256209.1	-	lincRNA	KNOWN	RP11-897M7.1	1	3	0.265265
chr12	131478844	131483034	131480939	ENSG00000279388.1	-	TEC	KNOWN	RP11-897M7.2	1	1	0.282095
chr12	131500849	131500961	131500905	ENSG00000280698.1	-	miRNA	NOVEL	AC073578.1	1	1	0.116239
chr12	131596857	131597115	131596986	ENSG00000255704.1	-	processed_pseudogene	KNOWN	RP11-292I17.1	1	1	0.671541
chr12	131620178	131620765	131620471	ENSG00000279455.1	-	TEC	KNOWN	RP11-495K9.10	1	1	0.552775
chr12	131621891	131623203	131622547	ENSG00000256258.1	-	lincRNA	KNOWN	RP11-495K9.9	1	2	0.552775
chr12	131645918	131646444	131646181	ENSG00000279153.1	+	TEC	KNOWN	RP11-495K9.8	1	1	0.758865
chr12	131647113	131648121	131647617	ENSG00000256424.1	-	lincRNA	KNOWN	RP11-495K9.7	1	2	0.758865
chr12	131661063	131661174	131661118	ENSG00000212154.1	+	rRNA	KNOWN	RNA5SP377	1	1	0.337748
chr12	131662596	131664704	131663650	ENSG00000249926.2	+	lincRNA	KNOWN	RP11-495K9.6	1	2	0.337748
chr12	131667492	131668246	131667869	ENSG00000243499.1	+	processed_pseudogene	KNOWN	RPS6P21	1	1	0.337748
chr12	131711081	131799737	131755409	ENSG00000061936.9	+	protein_coding	KNOWN	SFSWAP	11	19	0.467361
chr12	131756966	131758047	131757506	ENSG00000255933.1	-	lincRNA	KNOWN	RP11-495K9.5	1	2	0.477543
chr12	131801315	131801434	131801374	ENSG00000200516.1	-	rRNA	KNOWN	RNA5SP378	1	1	0.520612
chr12	131815263	131815368	131815315	ENSG00000200483.1	-	snRNA	KNOWN	RNU6-1017P	1	1	0.355026
chr12	131828393	131851783	131840088	ENSG00000198598.6	+	protein_coding	KNOWN	MMP17	11	10	0.915205
chr12	131857420	131864538	131860979	ENSG00000256955.2	+	lincRNA	KNOWN	RP11-417L19.2	1	3	0.952340
chr12	131894651	131923167	131908909	ENSG00000177169.9	+	protein_coding	KNOWN	ULK1	7	28	1.198607
chr12	131896500	131898239	131897369	ENSG00000279283.1	+	TEC	KNOWN	RP11-417L19.5	1	1	0.980960
chr12	131924736	131929351	131927043	ENSG00000255992.1	-	lincRNA	KNOWN	RP11-417L19.4	1	3	1.452286
chr12	131929200	131945896	131937548	ENSG00000177192.13	+	protein_coding	KNOWN	PUS1	11	6	0.941214
chr12	131934642	131934928	131934785	ENSG00000273568.1	+	sense_intronic	KNOWN	RP11-417L19.6	1	1	0.915527
chr12	131949920	132081102	132015511	ENSG00000183495.13	+	protein_coding	KNOWN	EP400	9	53	0.656833
chr12	132001690	132001775	132001732	ENSG00000271905.1	-	miRNA	NOVEL	AC137590.1	1	1	0.510882
chr12	132031224	132031359	132031291	ENSG00000208892.1	+	snoRNA	KNOWN	SNORA49	1	1	0.746395
chr12	132077803	132080460	132079131	ENSG00000257000.1	-	antisense	KNOWN	RP13-820C6.2	1	2	0.943669
chr12	132083540	132083779	132083659	ENSG00000274670.1	-	lincRNA	KNOWN	RP13-820C6.4	1	1	0.943669
chr12	132084283	132131639	132107961	ENSG00000185684.12	+	protein_coding	KNOWN	EP400NL	13	11	0.780037
chr12	132100013	132100820	132100416	ENSG00000279640.1	-	TEC	KNOWN	RP13-977J11.6	1	1	0.359214
chr12	132126461	132126764	132126612	ENSG00000256804.1	-	processed_pseudogene	KNOWN	RP13-977J11.5	1	1	1.144633
chr12	132136594	132144335	132140464	ENSG00000185163.9	-	protein_coding	KNOWN	DDX51	6	15	0.895403
chr12	132144448	132152473	132148460	ENSG00000184967.6	+	protein_coding	KNOWN	NOC4L	4	15	0.978392
chr12	132169823	132170043	132169933	ENSG00000276693.1	+	lincRNA	KNOWN	RP13-977J11.9	1	1	1.127580
chr12	132186735	132189695	132188215	ENSG00000256576.2	-	lincRNA	KNOWN	RP13-977J11.2	1	2	0.979517
chr12	132190213	132190997	132190605	ENSG00000256312.1	+	lincRNA	KNOWN	RP13-977J11.8	1	2	0.961408
chr12	132196372	132329349	132262860	ENSG00000182870.12	-	protein_coding	KNOWN	GALNT9	10	11	0.949876
chr12	132200436	132201287	132200861	ENSG00000279480.1	+	TEC	KNOWN	RP13-977J11.3	1	1	0.961408
chr12	132275391	132278329	132276860	ENSG00000256943.1	+	antisense	KNOWN	RP13-895J2.2	2	3	1.018874
chr12	132277349	132280900	132279124	ENSG00000256542.2	+	antisense	KNOWN	RP13-895J2.3	1	2	1.018874
chr12	132279256	132280900	132280078	ENSG00000278872.1	-	TEC	KNOWN	RP13-895J2.4	1	1	1.018874
chr12	132282814	132284606	132283710	ENSG00000277011.1	+	lincRNA	KNOWN	RP13-895J2.6	1	1	1.018874
chr12	132329850	132331575	132330712	ENSG00000255916.1	+	antisense	KNOWN	RP13-895J2.7	1	2	0.792297
chr12	132332005	132332432	132332218	ENSG00000279113.1	+	TEC	KNOWN	RP13-895J2.8	1	1	0.782664
chr12	132351855	132352322	132352088	ENSG00000279704.1	+	TEC	KNOWN	RP13-895J2.9	1	1	0.684259
chr12	132360734	132361198	132360966	ENSG00000279023.1	+	TEC	KNOWN	RP13-895J2.10	1	1	0.684259
chr12	132362810	132363348	132363079	ENSG00000280150.1	+	TEC	KNOWN	RP13-895J2.11	1	1	0.684259
chr12	132424504	132425208	132424856	ENSG00000274373.1	-	lincRNA	KNOWN	RP13-714J12.1	1	1	1.073255
chr12	132457160	132460024	132458592	ENSG00000256783.1	+	lincRNA	KNOWN	RP11-503G7.1	1	2	0.713058
chr12	132462242	132462856	132462549	ENSG00000256875.2	+	lincRNA	KNOWN	RP11-503G7.2	1	1	0.713058
chr12	132489551	132585188	132537369	ENSG00000112787.12	+	protein_coding	KNOWN	FBRSL1	8	17	1.058444
chr12	132550729	132554947	132552838	ENSG00000280287.1	+	TEC	KNOWN	RP13-554M15.7	1	1	1.152017
chr12	132565071	132566425	132565748	ENSG00000279700.1	+	TEC	KNOWN	RP13-554M15.2	1	1	1.152017
chr12	132581997	132582061	132582029	ENSG00000277052.1	+	miRNA	KNOWN	MIR6763	1	1	0.945506
chr12	132593031	132593698	132593364	ENSG00000277186.1	-	lincRNA	KNOWN	RP13-554M15.8	1	1	0.925742
chr12	132603150	132610543	132606846	ENSG00000204583.9	-	protein_coding	KNOWN	LRCOL1	6	6	0.928979
chr12	132618780	132622386	132620583	ENSG00000187848.12	+	protein_coding	KNOWN	P2RX2	8	12	0.969736
chr12	132621999	132622973	132622486	ENSG00000280311.1	-	TEC	KNOWN	RP13-554M15.5	1	1	0.969736
chr12	132623753	132687365	132655559	ENSG00000177084.16	-	protein_coding	KNOWN	POLE	22	49	0.881753
chr12	132687606	132704991	132696298	ENSG00000176894.9	+	protein_coding	KNOWN	PXMP2	5	5	0.890678
chr12	132688049	132714912	132701480	ENSG00000256632.3	+	protein_coding	KNOWN	RP13-672B3.2	1	5	0.907483
chr12	132710819	132722734	132716776	ENSG00000247077.6	+	protein_coding	KNOWN	PGAM5	4	6	1.001942
chr12	132723945	132724057	132724001	ENSG00000201469.1	-	rRNA	KNOWN	RNA5SP379	1	1	1.001942
chr12	132725503	132761888	132743695	ENSG00000176915.14	-	protein_coding	KNOWN	ANKLE2	12	13	0.808751
chr12	132745156	132745729	132745442	ENSG00000256108.1	+	processed_pseudogene	KNOWN	RP13-672B3.5	1	1	0.702310
chr12	132768909	132828858	132798883	ENSG00000090615.12	-	protein_coding	KNOWN	GOLGA3	8	24	1.137790
chr12	132822187	132956304	132889245	ENSG00000072609.17	-	protein_coding	KNOWN	CHFR	24	18	0.497341
chr12	132825701	132826184	132825942	ENSG00000232888.4	+	processed_pseudogene	KNOWN	RPS11P5	1	1	0.937821
chr12	132835374	132835500	132835437	ENSG00000252079.1	-	snRNA	KNOWN	RNU6-327P	1	1	0.783475
chr12	132865855	132867958	132866906	ENSG00000278949.1	-	TEC	KNOWN	RP11-46H11.11	1	1	0.655893
chr12	132887842	132888583	132888212	ENSG00000236617.2	+	antisense	KNOWN	RP11-46H11.12	1	2	0.567011
chr12	132899984	132900368	132900176	ENSG00000255703.1	+	processed_pseudogene	KNOWN	RP11-46H11.2	1	1	0.553042
chr12	132911470	132914732	132913101	ENSG00000250790.4	+	lincRNA	KNOWN	RP11-46H11.3	1	1	0.234792
chr12	132918308	132956306	132937307	ENSG00000196458.10	-	protein_coding	KNOWN	ZNF605	6	5	0.164145
chr12	132972338	132972890	132972614	ENSG00000256563.2	-	processed_pseudogene	KNOWN	NANOGNBP2	1	1	0.168749
chr12	132986365	133032952	133009658	ENSG00000198393.7	+	protein_coding	KNOWN	ZNF26	7	5	0.117592
chr12	132995190	132995302	132995246	ENSG00000252269.1	-	snRNA	KNOWN	RNU4ATAC12P	1	1	0.027503
chr12	133030389	133037222	133033805	ENSG00000246394.7	-	lincRNA	KNOWN	RP11-386I8.6	2	4	0.322289
chr12	133033503	133033956	133033729	ENSG00000255807.1	+	processed_pseudogene	KNOWN	PTP4A1P2	1	1	0.322289
chr12	133037292	133063304	133050298	ENSG00000198040.10	+	protein_coding	KNOWN	ZNF84	16	5	0.247408
chr12	133073516	133073983	133073749	ENSG00000279466.1	-	TEC	KNOWN	RP11-386I8.5	1	1	0.138786
chr12	133077762	133078392	133078077	ENSG00000279817.1	-	TEC	KNOWN	RP11-386I8.4	1	1	0.138786
chr12	133079838	133107544	133093691	ENSG00000196387.9	+	protein_coding	KNOWN	ZNF140	10	6	0.226498
chr12	133087513	133087615	133087564	ENSG00000281302.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.138786
chr12	133106817	133130473	133118645	ENSG00000214029.4	-	protein_coding	KNOWN	ZNF891	1	2	0.079735
chr12	133115692	133122340	133119016	ENSG00000271963.1	+	antisense	KNOWN	CTD-2140B24.6	1	2	0.047598
chr12	133125479	133125952	133125715	ENSG00000240991.3	+	processed_pseudogene	KNOWN	RPL23AP67	1	1	0.047598
chr12	133130575	133159465	133145020	ENSG00000256223.5	+	protein_coding	KNOWN	ZNF10	10	5	-0.003536
chr12	133130984	133202369	133166676	ENSG00000256825.4	+	protein_coding	KNOWN	CTD-2140B24.4	1	11	-0.010354
chr12	133181409	133214831	133198120	ENSG00000090612.20	+	protein_coding	KNOWN	ZNF268	19	7	0.057696
chr12	133217210	133217675	133217442	ENSG00000255919.1	-	processed_pseudogene	KNOWN	AC226150.3	1	1	0.045449
chr12	133218312	133236095	133227203	ENSG00000227059.6	-	protein_coding	KNOWN	ANHX	2	9	0.165908
chr12	133238335	133238438	133238386	ENSG00000239190.1	-	snRNA	KNOWN	RNU6-717P	1	1	0.396846
chr12	133238455	133238549	133238502	ENSG00000238443.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.396846
chr13	18174010	18178465	18176237	ENSG00000279924.1	-	unprocessed_pseudogene	KNOWN	RP11-341D18.2	1	4	-0.824867
chr13	18195297	18232024	18213660	ENSG00000279516.1	+	processed_transcript	KNOWN	FAM230C	1	8	-0.135353
chr13	18206570	18207469	18207019	ENSG00000279081.1	-	protein_coding	KNOWN	AL356585.2	1	1	-0.278652
chr13	18253526	18270822	18262174	ENSG00000280208.1	-	unprocessed_pseudogene	KNOWN	GGT4P	1	12	0.252094
chr13	18279320	18309934	18294627	ENSG00000279124.1	-	unprocessed_pseudogene	KNOWN	RP11-341D18.5	1	6	-0.089724
chr13	18282729	18282822	18282775	ENSG00000216097.3	-	miRNA	NOVEL	AL356585.1	1	1	0.192921
chr13	18297554	18298733	18298143	ENSG00000279730.2	+	processed_pseudogene	KNOWN	SETD8P1	1	1	-0.241135
chr13	18331933	18348596	18340264	ENSG00000279231.1	+	unprocessed_pseudogene	KNOWN	RP11-341D18.6	1	8	-0.529497
chr13	18408806	18431605	18420205	ENSG00000268486.5	+	transcribed_unprocessed_pseudogene	KNOWN	ABC7-42418200C9.1	3	7	-0.796238
chr13	18418526	18418632	18418579	ENSG00000276183.1	+	snRNA	NOVEL	U6	1	1	-0.865573
chr13	18467172	18485448	18476310	ENSG00000215604.3	-	unprocessed_pseudogene	KNOWN	ZNF962P	1	5	-0.808140
chr13	18491904	18492419	18492161	ENSG00000270496.1	+	processed_pseudogene	KNOWN	BNIP3P7	1	1	-0.356023
chr13	18540497	18550697	18545597	ENSG00000231238.1	+	lincRNA	KNOWN	LINC00349	1	2	-0.628589
chr13	18609132	18609702	18609417	ENSG00000233905.1	+	processed_pseudogene	KNOWN	LONRF2P2	1	1	-0.422581
chr13	18610298	18611675	18610986	ENSG00000229788.1	-	lincRNA	KNOWN	LINC00388	1	2	-0.073594
chr13	18629193	18629278	18629235	ENSG00000277682.1	+	miRNA	NOVEL	AL359737.1	1	1	-0.073594
chr13	18665235	18667221	18666228	ENSG00000235876.2	+	processed_pseudogene	KNOWN	FEM1AP4	1	1	-0.681237
chr13	18672827	18676163	18674495	ENSG00000231914.1	+	lincRNA	KNOWN	LINC00387	1	2	-0.169274
chr13	18680494	18681700	18681097	ENSG00000226361.5	+	processed_pseudogene	KNOWN	TERF1P5	1	1	-0.169274
chr13	18697003	18697507	18697255	ENSG00000228797.2	+	processed_pseudogene	KNOWN	FAM207BP	1	1	-0.274136
chr13	18724415	18724904	18724659	ENSG00000230931.2	-	processed_pseudogene	KNOWN	GXYLT1P1	1	1	-0.718974
chr13	18726706	18727414	18727060	ENSG00000204718.3	+	processed_pseudogene	KNOWN	CNN2P12	1	1	-0.718974
chr13	18734080	18734896	18734488	ENSG00000227784.1	+	processed_pseudogene	KNOWN	ZNF965P	1	1	-0.091315
chr13	18741730	18742718	18742224	ENSG00000244155.1	-	unprocessed_pseudogene	KNOWN	CYP4F34P	1	3	-0.091315
chr13	18807279	18808018	18807648	ENSG00000227568.1	-	processed_pseudogene	KNOWN	SNX18P26	1	1	0.004085
chr13	18809830	18810048	18809939	ENSG00000225016.1	+	processed_pseudogene	KNOWN	LINC00328-2P	1	1	0.006397
chr13	18816718	18871967	18844342	ENSG00000206192.7	-	unprocessed_pseudogene	KNOWN	ANKRD20A9P	1	19	-0.365629
chr13	18837768	18838098	18837933	ENSG00000242756.2	-	processed_pseudogene	KNOWN	RHOT1P3	1	1	-0.193680
chr13	18869185	18869291	18869238	ENSG00000223024.1	-	snRNA	KNOWN	RNU6-55P	1	1	-0.753034
chr13	18880054	18880157	18880105	ENSG00000206787.1	+	snRNA	KNOWN	RNU6-76P	1	1	-0.740454
chr13	18892260	18895230	18893745	ENSG00000235500.2	-	processed_pseudogene	KNOWN	SNX19P2	1	1	-0.562233
chr13	18905439	18907810	18906624	ENSG00000226250.1	+	lincRNA	KNOWN	LINC00408	1	4	-0.562233
chr13	18921889	18923765	18922827	ENSG00000231358.2	-	lincRNA	KNOWN	RP11-442J17.3	1	2	-0.447819
chr13	18946755	19062718	19004736	ENSG00000226057.6	-	transcribed_unprocessed_pseudogene	KNOWN	PHF2P2	2	20	-0.186176
chr13	19008259	19012559	19010409	ENSG00000232685.4	+	antisense	KNOWN	LINC00442	2	4	-0.202612
chr13	19015487	19019336	19017411	ENSG00000229375.1	-	unprocessed_pseudogene	KNOWN	USP24P1	1	5	-0.227945
chr13	19026001	19032626	19029313	ENSG00000187721.8	-	unprocessed_pseudogene	KNOWN	GTF2IP3	1	4	-0.390030
chr13	19027837	19028701	19028269	ENSG00000226619.1	+	antisense	KNOWN	RP11-301J16.7	1	2	-0.227945
chr13	19088487	19088581	19088534	ENSG00000252287.1	+	rRNA	KNOWN	RNA5SP24	1	1	0.200141
chr13	19126399	19139611	19133005	ENSG00000224778.1	+	unprocessed_pseudogene	KNOWN	CENPIP1	1	7	-0.281965
chr13	19151554	19152307	19151930	ENSG00000234894.1	-	unprocessed_pseudogene	KNOWN	RP11-408E5.6	1	4	0.056191
chr13	19152567	19171194	19161880	ENSG00000229147.1	-	unprocessed_pseudogene	KNOWN	SMPD4P2	1	14	0.054239
chr13	19172773	19172925	19172849	ENSG00000278337.1	+	unprocessed_pseudogene	KNOWN	RP11-408E5.8	1	1	0.025758
chr13	19173770	19181852	19177811	ENSG00000198033.11	-	protein_coding	KNOWN	TUBA3C	2	6	0.025758
chr13	19185225	19187349	19186287	ENSG00000121388.5	+	unprocessed_pseudogene	KNOWN	RP11-408E5.4	1	2	0.025758
chr13	19201637	19227432	19214534	ENSG00000227879.2	-	unprocessed_pseudogene	KNOWN	PSPC1P1	1	5	-0.270769
chr13	19262797	19263873	19263335	ENSG00000232243.1	-	lincRNA	KNOWN	RP11-408E5.5	2	3	-0.653435
chr13	19290593	19344825	19317709	ENSG00000237636.2	-	unprocessed_pseudogene	KNOWN	ANKRD26P3	1	15	-0.564512
chr13	19304593	19305625	19305109	ENSG00000215349.2	-	processed_pseudogene	KNOWN	MRPL3P1	1	1	-0.765050
chr13	19345049	19346749	19345899	ENSG00000236834.1	+	lincRNA	KNOWN	LINC00421	1	2	-0.541581
chr13	19349137	19407962	19378549	ENSG00000224976.2	+	unprocessed_pseudogene	KNOWN	PARP4P2	1	21	-0.233579
chr13	19382454	19383072	19382763	ENSG00000231184.3	+	processed_pseudogene	KNOWN	FAM58DP	1	1	-0.197515
chr13	19408042	19409529	19408785	ENSG00000229791.1	-	lincRNA	KNOWN	RP11-385E5.5	1	2	-0.428840
chr13	19411231	19416188	19413709	ENSG00000237164.1	+	unprocessed_pseudogene	KNOWN	SLC25A15P2	1	3	-0.127885
chr13	19422877	19536762	19479819	ENSG00000132958.17	-	protein_coding	KNOWN	TPTE2	6	20	-0.307433
chr13	19458398	19458718	19458558	ENSG00000223625.1	-	processed_pseudogene	KNOWN	CYCSP32	1	1	-0.492971
chr13	19552571	19570288	19561429	ENSG00000232894.1	-	unprocessed_pseudogene	KNOWN	MRPS31P2	1	4	-0.615678
chr13	19560013	19561269	19560641	ENSG00000215572.2	-	processed_pseudogene	KNOWN	ESRRAP1	1	1	-0.624761
chr13	19563589	19564900	19564244	ENSG00000238132.2	-	processed_pseudogene	KNOWN	CASC4P1	1	1	-0.624761
chr13	19587118	19588350	19587734	ENSG00000225316.1	+	lincRNA	KNOWN	LINC00350	1	2	-0.067949
chr13	19633681	19673459	19653570	ENSG00000196199.13	+	protein_coding	KNOWN	MPHOSPH8	5	14	-0.092755
chr13	19674624	19675884	19675254	ENSG00000226352.2	+	antisense	KNOWN	RP11-523H24.3	1	2	0.340736
chr13	19674752	19783019	19728885	ENSG00000121390.18	-	protein_coding	KNOWN	PSPC1	8	10	0.107232
chr13	19736975	19737254	19737114	ENSG00000275014.1	-	misc_RNA	KNOWN	RN7SL166P	1	1	-0.131730
chr13	19818121	19818619	19818370	ENSG00000233469.1	-	processed_pseudogene	KNOWN	ST6GALNAC4P1	1	1	0.175320
chr13	19823482	19863636	19843559	ENSG00000132950.18	-	protein_coding	KNOWN	ZMYM5	8	8	0.098046
chr13	19841827	19843672	19842749	ENSG00000223576.2	+	antisense	KNOWN	RP11-61K9.2	1	2	0.083530
chr13	19863858	19865048	19864453	ENSG00000275964.1	+	lincRNA	KNOWN	RP11-61K9.3	1	1	0.082406
chr13	19930804	19930891	19930847	ENSG00000266230.1	-	miRNA	NOVEL	AL591925.1	1	1	0.034441
chr13	19958670	20091829	20025249	ENSG00000121741.16	+	protein_coding	KNOWN	ZMYM2	11	26	-0.006057
chr13	20070250	20072136	20071193	ENSG00000237672.1	-	processed_pseudogene	KNOWN	KRR1P1	1	3	-0.025660
chr13	20092632	20094144	20093388	ENSG00000279951.1	+	TEC	KNOWN	RP11-264J4.8	1	1	-0.066270
chr13	20102701	20103230	20102965	ENSG00000236076.1	+	lincRNA	KNOWN	LINC01072	1	2	-0.066270
chr13	20138255	20161049	20149652	ENSG00000121743.3	-	protein_coding	KNOWN	GJA3	1	2	0.183022
chr13	20178978	20179462	20179220	ENSG00000226633.2	-	processed_pseudogene	KNOWN	PPIAP28	1	1	0.291301
chr13	20181531	20181942	20181736	ENSG00000260131.1	+	antisense	KNOWN	LINC00556	1	1	0.291301
chr13	20187470	20192898	20190184	ENSG00000165474.5	-	protein_coding	KNOWN	GJB2	2	2	0.220698
chr13	20194412	20196005	20195208	ENSG00000279065.1	+	TEC	KNOWN	RP11-264J4.10	1	1	0.159106
chr13	20221971	20232395	20227183	ENSG00000121742.15	-	protein_coding	KNOWN	GJB6	4	5	0.001271
chr13	20403667	20525857	20464762	ENSG00000165475.13	-	protein_coding	KNOWN	CRYL1	3	9	0.043075
chr13	20433778	20433846	20433812	ENSG00000263978.1	-	miRNA	KNOWN	MIR4499	1	1	0.189458
chr13	20564708	20567045	20565876	ENSG00000277020.4	-	antisense	KNOWN	RP11-476H16.1	2	4	0.266021
chr13	20567069	20691437	20629253	ENSG00000032742.17	+	protein_coding	KNOWN	IFT88	7	28	-0.021414
chr13	20575758	20575835	20575796	ENSG00000276024.1	-	miRNA	NOVEL	AL590096.1	1	1	0.052025
chr13	20607268	20608131	20607699	ENSG00000238286.1	+	processed_pseudogene	KNOWN	SLC35E1P1	1	1	-0.383742
chr13	20612161	20612338	20612249	ENSG00000222726.1	+	snRNA	KNOWN	RNU2-7P	1	1	0.041951
chr13	20699307	20703718	20701512	ENSG00000278291.1	-	antisense	KNOWN	RP11-172H24.4	1	1	-0.075118
chr13	20702127	20723098	20712612	ENSG00000172458.4	+	protein_coding	KNOWN	IL17D	3	3	0.152337
chr13	20712431	20714146	20713288	ENSG00000279135.1	+	TEC	KNOWN	RP11-261P13.5	1	1	0.289029
chr13	20728731	20773958	20751344	ENSG00000150456.10	-	protein_coding	KNOWN	N6AMT2	3	5	0.009262
chr13	20747035	20748057	20747546	ENSG00000233524.1	-	processed_pseudogene	KNOWN	RANP8	1	2	0.313119
chr13	20768876	20769375	20769125	ENSG00000275485.1	-	sense_intronic	KNOWN	RP11-261P13.6	1	1	-0.317652
chr13	20777329	20903048	20840188	ENSG00000132953.16	-	protein_coding	KNOWN	XPO4	4	23	-0.102734
chr13	20921664	20923233	20922448	ENSG00000236704.1	-	processed_pseudogene	KNOWN	CNOT4P1	1	2	0.162381
chr13	20938564	20949599	20944081	ENSG00000233780.3	-	transcribed_processed_pseudogene	KNOWN	HNRNPA1P30	2	6	0.303496
chr13	20956179	20956443	20956311	ENSG00000234363.1	-	processed_pseudogene	KNOWN	PPIAP27	1	1	-0.000037
chr13	20961310	20962195	20961752	ENSG00000213621.3	+	processed_pseudogene	KNOWN	RPSAP54	1	1	-0.000037
chr13	20973032	21061547	21017289	ENSG00000150457.8	-	protein_coding	KNOWN	LATS2	2	8	0.292740
chr13	20999367	20999467	20999417	ENSG00000280785.1	-	snRNA	NOVEL	U6	1	1	0.234011
chr13	21005157	21018122	21011639	ENSG00000233851.1	+	antisense	KNOWN	LATS2-AS1	1	2	0.294467
chr13	21038529	21038667	21038598	ENSG00000201821.1	-	snRNA	KNOWN	RNU4-9P	1	1	0.319402
chr13	21094315	21094714	21094514	ENSG00000180172.7	-	processed_pseudogene	KNOWN	RPS12P23	1	1	0.235117
chr13	21103003	21104371	21103687	ENSG00000225585.1	-	processed_pseudogene	KNOWN	IPPKP1	1	3	0.235117
chr13	21126271	21126396	21126333	ENSG00000275689.1	-	misc_RNA	NOVEL	FAS-AS1	1	1	0.633886
chr13	21139886	21139957	21139921	ENSG00000252128.1	-	snoRNA	NOVEL	SNORD27	1	1	0.023097
chr13	21140514	21149084	21144799	ENSG00000150459.12	+	protein_coding	KNOWN	SAP18	8	4	0.023097
chr13	21153595	21176602	21165098	ENSG00000165480.15	-	protein_coding	KNOWN	SKA3	7	9	0.106303
chr13	21176645	21179084	21177864	ENSG00000173141.4	+	protein_coding	KNOWN	MRPL57	1	2	0.198301
chr13	21216555	21216660	21216607	ENSG00000271250.1	+	processed_pseudogene	KNOWN	RP11-101P17.14	1	1	0.027503
chr13	21234568	21235204	21234886	ENSG00000233405.1	+	lincRNA	KNOWN	LINC01046	1	2	0.099727
chr13	21260015	21295003	21277509	ENSG00000235438.7	+	transcribed_processed_pseudogene	KNOWN	ESRRAP2	5	7	-0.093512
chr13	21287634	21287828	21287731	ENSG00000277077.1	-	unprocessed_pseudogene	KNOWN	RP11-101P17.15	1	1	-0.185789
chr13	21298139	21306373	21302256	ENSG00000233325.3	+	transcribed_unprocessed_pseudogene	KNOWN	MIPEPP3	2	4	-0.306926
chr13	21303515	21348721	21326118	ENSG00000224429.7	-	lincRNA	KNOWN	LINC00539	4	7	-0.063776
chr13	21319156	21320866	21320011	ENSG00000215571.5	+	processed_pseudogene	KNOWN	GRK6P1	1	1	-0.159193
chr13	21358373	21359314	21358843	ENSG00000235076.2	+	processed_pseudogene	KNOWN	GAPDHP52	1	1	0.091992
chr13	21369790	21369899	21369844	ENSG00000222747.1	-	rRNA	KNOWN	RNA5SP25	1	1	0.091992
chr13	21372573	21459370	21415971	ENSG00000180776.15	-	protein_coding	KNOWN	ZDHHC20	10	13	-0.133474
chr13	21376977	21377874	21377425	ENSG00000236953.1	-	sense_intronic	KNOWN	ZDHHC20-IT1	1	2	0.041951
chr13	21483834	21484174	21484004	ENSG00000226908.1	-	processed_pseudogene	KNOWN	HIST1H2BPS3	1	1	0.025649
chr13	21492691	21604214	21548452	ENSG00000165487.13	-	protein_coding	KNOWN	MICU2	8	12	-0.260260
chr13	21530690	21531323	21531006	ENSG00000230022.1	+	processed_pseudogene	KNOWN	FNTAP2	1	1	-0.073293
chr13	21551304	21551410	21551357	ENSG00000207518.1	-	snRNA	KNOWN	RNU6-59P	1	1	-0.482244
chr13	21628413	21629015	21628714	ENSG00000226525.5	-	processed_pseudogene	KNOWN	RPS7P10	1	1	-0.063659
chr13	21671383	21704498	21687940	ENSG00000102678.6	+	protein_coding	KNOWN	FGF9	3	3	-0.034748
chr13	21790537	21790845	21790691	ENSG00000244197.3	+	misc_RNA	KNOWN	RN7SL766P	1	1	0.016264
chr13	21872770	21878160	21875465	ENSG00000226722.3	-	lincRNA	KNOWN	LINC00424	2	2	-0.101831
chr13	22040975	22276524	22158749	ENSG00000276476.2	+	lincRNA	KNOWN	LINC00540	3	2	-0.301603
chr13	22099163	22099544	22099353	ENSG00000237175.1	-	processed_pseudogene	KNOWN	NME1P1	1	1	-0.423549
chr13	22113119	22113338	22113228	ENSG00000226118.1	-	processed_pseudogene	KNOWN	MTND3P1	1	1	-0.252224
chr13	22663953	22679652	22671802	ENSG00000279282.1	+	protein_coding	KNOWN	AL354828.1	1	15	-0.592835
chr13	22664217	22675253	22669735	ENSG00000280175.1	-	protein_coding	KNOWN	AL354828.2	1	15	-0.616237
chr13	22696023	22696574	22696298	ENSG00000232187.1	-	processed_pseudogene	KNOWN	FTH1P7	1	1	-0.518966
chr13	22704739	22706206	22705472	ENSG00000225777.1	-	processed_pseudogene	KNOWN	DDX39AP1	1	2	-0.518966
chr13	22803145	22803224	22803184	ENSG00000253094.1	+	snoRNA	NOVEL	SNORD36	1	1	-0.422581
chr13	22803296	22803648	22803472	ENSG00000237952.1	+	processed_pseudogene	KNOWN	RPL7AP73	1	1	-0.422581
chr13	22837026	22837880	22837453	ENSG00000226507.1	-	processed_pseudogene	KNOWN	IPMKP1	1	1	-0.334273
chr13	22850101	22850561	22850331	ENSG00000231650.1	+	processed_pseudogene	KNOWN	RFESDP1	1	1	-0.402368
chr13	22879125	22879199	22879162	ENSG00000240341.2	-	miRNA	NOVEL	AL162853.1	1	1	-0.465786
chr13	22894656	22916369	22905512	ENSG00000262619.1	-	lincRNA	KNOWN	LINC00621	1	3	-0.342220
chr13	22897341	22898005	22897673	ENSG00000230535.1	-	processed_pseudogene	KNOWN	BASP1P1	1	1	-0.281467
chr13	22915651	22916523	22916087	ENSG00000234685.1	+	processed_pseudogene	KNOWN	NUS1P2	1	1	-0.488552
chr13	22918591	22924602	22921596	ENSG00000262198.1	+	lincRNA	KNOWN	RP11-124N19.3	1	2	-0.488552
chr13	22931537	22931999	22931768	ENSG00000283075.1	+	lincRNA	KNOWN	RP11-124N19.4	1	1	0.068659
chr13	22977855	22977997	22977926	ENSG00000223116.1	-	miRNA	NOVEL	AL157931.1	1	1	-0.010578
chr13	23134174	23134564	23134369	ENSG00000233440.2	+	processed_pseudogene	KNOWN	HMGA1P6	1	1	-0.069597
chr13	23152586	23152686	23152636	ENSG00000207157.1	-	misc_RNA	KNOWN	RNY3P4	1	1	-0.602382
chr13	23169835	23170597	23170216	ENSG00000229483.2	-	lincRNA	KNOWN	LINC00362	1	2	-0.519396
chr13	23180952	23325165	23253058	ENSG00000102683.7	+	protein_coding	KNOWN	SGCG	1	8	-0.396732
chr13	23217432	23217534	23217483	ENSG00000252952.1	-	snRNA	KNOWN	RNU6-58P	1	1	-0.337516
chr13	23243520	23247184	23245352	ENSG00000235205.1	+	processed_pseudogene	KNOWN	TATDN2P3	1	1	-0.402773
chr13	23267506	23269150	23268328	ENSG00000236803.1	+	processed_pseudogene	KNOWN	SDAD1P4	1	1	-0.368426
chr13	23328823	23433728	23381275	ENSG00000151835.13	-	protein_coding	KNOWN	SACS	6	10	0.032909
chr13	23373423	23374061	23373742	ENSG00000232163.2	+	processed_pseudogene	KNOWN	RPLP1P13	1	2	0.193871
chr13	23418971	23428869	23423920	ENSG00000229558.2	+	lincRNA	KNOWN	SACS-AS1	1	2	0.223236
chr13	23466571	23487464	23477017	ENSG00000232977.6	+	lincRNA	KNOWN	LINC00327	3	3	-0.053194
chr13	23498796	23502874	23500835	ENSG00000227893.1	+	lincRNA	KNOWN	LINC00352	1	2	0.216082
chr13	23570370	23676104	23623237	ENSG00000127863.15	+	protein_coding	KNOWN	TNFRSF19	5	10	-0.096580
chr13	23698747	23698815	23698781	ENSG00000281906.1	-	miRNA	NOVEL	AL161422.1	1	1	-0.053206
chr13	23730189	23889419	23809804	ENSG00000027001.9	-	protein_coding	KNOWN	MIPEP	5	19	-0.137599
chr13	23765934	23766104	23766019	ENSG00000232102.1	-	processed_pseudogene	KNOWN	MTCO3P2	1	1	-0.044697
chr13	23888889	23897263	23893076	ENSG00000205861.11	+	antisense	KNOWN	C1QTNF9B-AS1	3	4	0.028581
chr13	23891099	23902655	23896877	ENSG00000205863.9	-	protein_coding	KNOWN	C1QTNF9B	4	6	0.075313
chr13	23939557	23946782	23943169	ENSG00000196593.9	-	transcribed_unprocessed_pseudogene	KNOWN	ANKRD20A19P	3	5	-0.256618
chr13	23979700	24321031	24150365	ENSG00000273167.1	+	protein_coding	KNOWN	RP11-307N16.6	1	16	0.064396
chr13	23979805	24307074	24143439	ENSG00000182957.15	+	protein_coding	KNOWN	SPATA13	12	15	0.069467
chr13	23979810	24035027	24007418	ENSG00000228741.2	+	lincRNA	KNOWN	SPATA13	1	5	0.182520
chr13	24122065	24123814	24122939	ENSG00000225674.1	-	processed_pseudogene	KNOWN	IPO7P2	1	1	0.135319
chr13	24162416	24162504	24162460	ENSG00000252695.1	+	miRNA	KNOWN	MIR2276	1	1	0.115451
chr13	24252749	24254439	24253594	ENSG00000227213.1	-	antisense	KNOWN	SPATA13-AS1	1	3	-0.041760
chr13	24307166	24322535	24314850	ENSG00000240654.6	+	protein_coding	KNOWN	C1QTNF9	2	4	-0.056253
chr13	24315725	24321598	24318661	ENSG00000240868.1	-	antisense	KNOWN	C1QTNF9-AS1	1	2	-0.062731
chr13	24321126	24321428	24321277	ENSG00000281899.1	-	protein_coding	KNOWN	C1QTNF9B-AS1	1	1	-0.062731
chr13	24323021	24323457	24323239	ENSG00000277040.1	+	processed_pseudogene	KNOWN	RP11-307N16.7	1	1	-0.062731
chr13	24328211	24329072	24328641	ENSG00000234627.3	+	processed_pseudogene	KNOWN	NUS1P3	1	1	-0.062731
chr13	24331450	24337121	24334285	ENSG00000261498.1	+	lincRNA	KNOWN	LINC00566	1	2	-0.261187
chr13	24400703	24401029	24400866	ENSG00000233545.1	+	processed_pseudogene	KNOWN	CYCSP33	1	1	0.182190
chr13	24408157	24597676	24502916	ENSG00000205822.10	+	transcribed_unprocessed_pseudogene	KNOWN	TPTE2P6	3	10	-0.208438
chr13	24420926	24512810	24466868	ENSG00000102699.5	-	protein_coding	KNOWN	PARP4	3	34	-0.138907
chr13	24555228	24555313	24555270	ENSG00000266216.1	-	miRNA	NOVEL	AL359538.2	1	1	-0.304767
chr13	24566843	24570728	24568785	ENSG00000244615.1	+	transcribed_unprocessed_pseudogene	KNOWN	PSPC1P2	1	2	-0.292512
chr13	24566873	24597676	24582274	ENSG00000243008.2	+	processed_transcript	KNOWN	RP11-556N21.1	1	13	-0.290088
chr13	24609079	24609175	24609127	ENSG00000211508.1	+	miRNA	NOVEL	AL359538.1	1	1	-0.416009
chr13	24680411	24712493	24696452	ENSG00000075673.11	+	protein_coding	KNOWN	ATP12A	2	23	-0.121584
chr13	24703556	24703665	24703610	ENSG00000207474.1	-	misc_RNA	KNOWN	RNY1P7	1	1	-0.172508
chr13	24704338	24704788	24704563	ENSG00000225404.2	-	processed_pseudogene	KNOWN	RPL26P34	1	1	-0.172508
chr13	24742677	24746184	24744430	ENSG00000231417.2	+	unprocessed_pseudogene	KNOWN	IRX1P1	1	5	-0.245878
chr13	24750657	24752171	24751414	ENSG00000226695.1	-	processed_pseudogene	KNOWN	ANKRD20A10P	1	1	-0.196684
chr13	24764152	24879921	24822036	ENSG00000132972.18	+	protein_coding	KNOWN	RNF17	5	36	-0.503834
chr13	24882284	24922889	24902586	ENSG00000151849.14	-	protein_coding	KNOWN	CENPJ	6	18	-0.377698
chr13	24924677	24968487	24946582	ENSG00000253771.5	-	transcribed_unprocessed_pseudogene	KNOWN	TPTE2P1	4	7	-0.169528
chr13	24933006	24936796	24934901	ENSG00000273628.1	+	unprocessed_pseudogene	KNOWN	RP11-756A22.7	1	2	0.091992
chr13	24943575	24944498	24944036	ENSG00000251299.1	+	unprocessed_pseudogene	KNOWN	SLC25A15P3	1	2	0.091992
chr13	24988577	24988925	24988751	ENSG00000232858.1	-	processed_pseudogene	KNOWN	RPL34P27	1	1	-0.425857
chr13	25017404	25017536	25017470	ENSG00000269099.2	+	processed_pseudogene	KNOWN	LSP1P1	1	1	-0.074658
chr13	25017766	25017903	25017834	ENSG00000276958.1	-	unprocessed_pseudogene	KNOWN	RP11-458I4.2	1	1	-0.074658
chr13	25095868	25099254	25097561	ENSG00000151846.8	+	protein_coding	KNOWN	PABPC3	1	1	-0.214670
chr13	25141536	25141809	25141672	ENSG00000279695.1	+	TEC	KNOWN	RP11-165I9.10	1	1	-0.124583
chr13	25161684	25172288	25166986	ENSG00000165566.12	-	protein_coding	KNOWN	AMER2	2	3	-0.150553
chr13	25172828	25180079	25176453	ENSG00000234056.1	-	lincRNA	KNOWN	LINC00463	1	4	-0.033539
chr13	25181441	25189760	25185600	ENSG00000238169.1	+	antisense	KNOWN	LINC01053	1	3	-0.033539
chr13	25190063	25190317	25190190	ENSG00000279550.1	-	TEC	KNOWN	RP11-165I9.9	1	1	-0.069371
chr13	25193107	25210295	25201701	ENSG00000225105.2	-	lincRNA	KNOWN	LINC01076	1	2	-0.069196
chr13	25206049	25206506	25206277	ENSG00000235315.2	+	processed_pseudogene	KNOWN	RPL23AP69	1	1	-0.069371
chr13	25246201	25288009	25267105	ENSG00000139505.11	-	protein_coding	KNOWN	MTMR6	2	14	-0.263775
chr13	25246531	25246615	25246573	ENSG00000221324.1	+	miRNA	NOVEL	AL590787.1	1	1	0.187675
chr13	25300124	25301438	25300781	ENSG00000260509.2	-	lincRNA	KNOWN	RP11-271M24.2	1	1	-0.151934
chr13	25301524	25349800	25325662	ENSG00000139496.15	+	protein_coding	KNOWN	NUP58	14	16	-0.298177
chr13	25365799	25366155	25365977	ENSG00000234152.1	-	processed_pseudogene	KNOWN	TCEB2P1	1	1	-0.587488
chr13	25372071	26025851	25698961	ENSG00000132932.16	+	protein_coding	KNOWN	ATP8A2	5	37	-0.316341
chr13	25517119	25517225	25517172	ENSG00000199767.1	+	snRNA	KNOWN	RNU6-78P	1	1	-0.387176
chr13	25863250	25863667	25863458	ENSG00000180803.3	-	processed_pseudogene	KNOWN	RP11-467D10.2	1	1	-0.165166
chr13	25944478	25944766	25944622	ENSG00000242381.3	+	misc_RNA	KNOWN	RN7SL741P	1	1	-0.151737
chr13	25944606	25944673	25944639	ENSG00000281497.1	+	miRNA	NOVEL	AL138815.1	1	1	-0.151737
chr13	25950704	25950821	25950762	ENSG00000223158.1	-	misc_RNA	KNOWN	RNY1P3	1	1	0.050651
chr13	26044597	26051031	26047814	ENSG00000180730.4	-	protein_coding	KNOWN	SHISA2	1	2	0.133495
chr13	26052276	26053385	26052830	ENSG00000231983.1	-	lincRNA	KNOWN	LINC00415	1	2	-0.122747
chr13	26114409	26154175	26134292	ENSG00000233963.1	-	unprocessed_pseudogene	KNOWN	ATP8A2P3	1	16	-0.238091
chr13	26117548	26118964	26118256	ENSG00000234706.1	-	processed_pseudogene	KNOWN	PRUNEP1	1	3	-0.180380
chr13	26132115	26222493	26177304	ENSG00000127870.16	-	protein_coding	KNOWN	RNF6	7	6	-0.102934
chr13	26222191	26222654	26222422	ENSG00000277368.1	+	antisense	KNOWN	RP11-380N8.7	1	1	0.075409
chr13	26229332	26229644	26229488	ENSG00000271559.1	-	processed_pseudogene	KNOWN	RP11-380N8.6	1	1	0.075409
chr13	26234213	26237129	26235671	ENSG00000227882.1	+	processed_pseudogene	KNOWN	PRKRIRP6	1	3	-0.151737
chr13	26254104	26405238	26329671	ENSG00000132964.11	+	protein_coding	KNOWN	CDK8	6	13	-0.274656
chr13	26359529	26359702	26359615	ENSG00000278413.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.258289
chr13	26557703	26688948	26623325	ENSG00000132970.12	+	protein_coding	KNOWN	WASF3	3	10	-0.140481
chr13	26576886	26577675	26577280	ENSG00000234031.1	+	processed_pseudogene	KNOWN	RPS3AP44	1	1	-0.186473
chr13	26606544	26641364	26623954	ENSG00000237001.6	-	antisense	KNOWN	WASF3-AS1	8	4	-0.262701
chr13	26755200	26760785	26757992	ENSG00000132975.7	-	protein_coding	KNOWN	GPR12	2	2	-0.485193
chr13	26905362	26905861	26905611	ENSG00000230256.1	+	processed_pseudogene	KNOWN	FGFR1OP2P1	1	1	0.021219
chr13	26977543	26977789	26977666	ENSG00000223782.1	+	processed_pseudogene	KNOWN	RPS21P8	1	1	0.590540
chr13	27017554	27017909	27017731	ENSG00000218198.3	-	processed_pseudogene	KNOWN	RPS20P32	1	1	0.527689
chr13	27066142	27171896	27119019	ENSG00000152484.13	-	protein_coding	KNOWN	USP12	3	9	0.068374
chr13	27077218	27077962	27077590	ENSG00000278496.1	+	unprocessed_pseudogene	KNOWN	RP11-144H23.2	1	1	0.189688
chr13	27162855	27169135	27165995	ENSG00000232162.1	+	antisense	KNOWN	USP12-AS1	1	2	-0.179035
chr13	27172259	27182998	27177628	ENSG00000230641.1	+	antisense	KNOWN	USP12-AS2	1	2	0.046477
chr13	27178263	27251288	27214775	ENSG00000275294.4	-	lincRNA	KNOWN	RP11-428O18.6	2	5	-0.027318
chr13	27236282	27236811	27236546	ENSG00000234772.1	-	antisense	KNOWN	LINC00412	1	2	-0.320449
chr13	27251309	27256691	27254000	ENSG00000122026.10	+	protein_coding	KNOWN	RPL21	10	6	-0.016068
chr13	27255064	27255135	27255099	ENSG00000207500.1	+	snoRNA	KNOWN	SNORD102	1	1	-0.016068
chr13	27255401	27255526	27255463	ENSG00000207051.1	+	snoRNA	KNOWN	SNORA27	1	1	-0.016068
chr13	27270327	27273690	27272008	ENSG00000122035.6	+	protein_coding	KNOWN	RASL11A	3	4	0.300745
chr13	27320013	27320159	27320086	ENSG00000221756.1	+	miRNA	NOVEL	AL159977.1	1	1	-0.162581
chr13	27343687	27343746	27343716	ENSG00000252247.2	-	snRNA	KNOWN	RNU6-70P	1	1	-0.145587
chr13	27373348	27374366	27373857	ENSG00000229609.1	+	lincRNA	KNOWN	LINC01079	1	2	0.392746
chr13	27402476	27402587	27402531	ENSG00000201242.1	-	misc_RNA	KNOWN	RNY1P1	1	1	0.075690
chr13	27424544	27435823	27430183	ENSG00000122034.12	+	protein_coding	KNOWN	GTF3A	9	12	0.030853
chr13	27435643	27450591	27443117	ENSG00000122033.14	-	protein_coding	KNOWN	MTIF3	12	7	0.038954
chr13	27488138	27488232	27488185	ENSG00000252499.1	+	snRNA	KNOWN	RNU6-63P	1	1	0.252928
chr13	27545911	27620404	27583157	ENSG00000139517.7	-	protein_coding	KNOWN	LNX2	1	10	-0.149214
chr13	27620742	27667415	27644078	ENSG00000186184.15	+	protein_coding	KNOWN	POLR1D	12	4	-0.185223
chr13	27667540	27680566	27674053	ENSG00000273552.1	-	lincRNA	KNOWN	RP11-87C7.3	1	3	-0.211960
chr13	27696393	27697204	27696798	ENSG00000226703.1	-	processed_pseudogene	KNOWN	NPM1P4	1	1	-0.555435
chr13	27792643	27794768	27793705	ENSG00000169840.4	+	protein_coding	KNOWN	GSX1	1	2	-0.279102
chr13	27828763	27828869	27828816	ENSG00000207330.1	+	snRNA	KNOWN	RNU6-73P	1	1	0.292456
chr13	27833444	27921404	27877424	ENSG00000247381.2	-	antisense	KNOWN	PDX1-AS1	1	3	-0.139998
chr13	27920020	27926231	27923125	ENSG00000139515.5	+	protein_coding	KNOWN	PDX1	1	2	-0.069472
chr13	27945206	27945590	27945398	ENSG00000180389.6	+	protein_coding	KNOWN	ATP5EP2	1	1	0.020733
chr13	27953526	27955370	27954448	ENSG00000260704.1	+	lincRNA	KNOWN	LINC00543	1	1	-0.023485
chr13	27962137	27971139	27966638	ENSG00000165556.9	-	protein_coding	KNOWN	CDX2	2	3	0.028722
chr13	27977714	27988654	27983184	ENSG00000183463.5	-	protein_coding	KNOWN	URAD	1	2	0.388766
chr13	27989296	27989584	27989440	ENSG00000242360.3	-	misc_RNA	KNOWN	RN7SL272P	1	1	0.388766
chr13	28003274	28100592	28051933	ENSG00000122025.14	-	protein_coding	KNOWN	FLT3	3	25	0.105534
chr13	28067587	28068334	28067960	ENSG00000271026.1	+	processed_pseudogene	KNOWN	KATNBL1P1	1	1	-0.007544
chr13	28107431	28107877	28107654	ENSG00000235115.3	+	processed_pseudogene	KNOWN	CHCHD2P8	1	1	-0.289437
chr13	28136843	28138193	28137518	ENSG00000261485.1	-	antisense	KNOWN	PAN3-AS1	1	1	0.083114
chr13	28138506	28295335	28216920	ENSG00000152520.13	+	protein_coding	KNOWN	PAN3	4	19	0.015518
chr13	28214513	28215897	28215205	ENSG00000232587.1	+	processed_pseudogene	KNOWN	EEF1A1P3	1	1	0.140901
chr13	28232501	28232607	28232554	ENSG00000200840.1	+	snRNA	KNOWN	RNU6-82P	1	1	-0.099307
chr13	28300344	28495128	28397736	ENSG00000102755.10	-	protein_coding	KNOWN	FLT1	8	30	0.134361
chr13	28495633	28497267	28496450	ENSG00000279393.1	+	TEC	KNOWN	RP11-95G6.1	1	1	0.285716
chr13	28598833	28600052	28599442	ENSG00000235472.1	+	processed_pseudogene	KNOWN	EIF4A1P7	1	1	0.321997
chr13	28629794	28629883	28629838	ENSG00000273964.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.056710
chr13	28659104	28678925	28669014	ENSG00000132963.7	+	protein_coding	KNOWN	POMP	2	7	-0.073524
chr13	28700064	28718970	28709517	ENSG00000139508.14	-	protein_coding	KNOWN	SLC46A3	3	7	0.087814
chr13	28703702	28703807	28703754	ENSG00000202237.1	-	snRNA	KNOWN	RNU6-53P	1	1	0.155768
chr13	28722386	28724021	28723203	ENSG00000233588.1	-	processed_pseudogene	KNOWN	CYP51A1P2	1	2	0.012557
chr13	28778224	28778448	28778336	ENSG00000277227.1	-	unprocessed_pseudogene	KNOWN	RP11-161P17.2	1	1	-0.013251
chr13	28778558	28778937	28778747	ENSG00000236339.1	+	processed_pseudogene	KNOWN	POM121L13P	1	1	-0.013251
chr13	28820348	29505947	29163147	ENSG00000132938.18	+	protein_coding	KNOWN	MTUS2	7	16	-0.338630
chr13	29222562	29222641	29222601	ENSG00000221670.1	+	miRNA	NOVEL	AL596092.1	1	1	-0.192217
chr13	29239379	29250554	29244966	ENSG00000236758.5	-	antisense	KNOWN	MTUS2-AS2	3	3	-0.659134
chr13	29306778	29307785	29307281	ENSG00000223460.1	+	processed_pseudogene	KNOWN	GAPDHP69	1	1	-0.450158
chr13	29339566	29339869	29339717	ENSG00000270680.1	-	processed_pseudogene	KNOWN	RP11-351N4.4	1	1	-0.096670
chr13	29476515	29490105	29483310	ENSG00000179141.9	-	antisense	KNOWN	MTUS2-AS1	3	4	0.046531
chr13	29509410	29595688	29552549	ENSG00000139514.12	-	protein_coding	KNOWN	SLC7A1	3	13	0.426619
chr13	29764371	29850684	29807527	ENSG00000122042.9	-	protein_coding	KNOWN	UBL3	1	5	-0.136388
chr13	29864111	29864187	29864149	ENSG00000277180.1	-	miRNA	NOVEL	AL139188.1	1	1	0.164142
chr13	29864372	29864629	29864500	ENSG00000278172.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.164142
chr13	29865959	29866169	29866064	ENSG00000236258.1	-	processed_pseudogene	KNOWN	TIMM8BP1	1	1	0.164142
chr13	29872613	29888405	29880509	ENSG00000224329.2	-	lincRNA	KNOWN	LINC00297	1	2	-0.092091
chr13	29918647	29926651	29922649	ENSG00000224405.1	-	antisense	KNOWN	LINC00572	1	2	0.207469
chr13	29935905	29950488	29943196	ENSG00000122043.10	+	lincRNA	KNOWN	LINC00544	2	6	0.315990
chr13	30022021	30023800	30022910	ENSG00000266505.1	-	lincRNA	KNOWN	RP11-629E24.2	1	1	0.070723
chr13	30103178	30108875	30106026	ENSG00000224511.1	-	lincRNA	KNOWN	LINC00365	2	2	0.359339
chr13	30151886	30159621	30155753	ENSG00000232117.1	-	lincRNA	KNOWN	LINC00384	1	2	0.482907
chr13	30154066	30154586	30154326	ENSG00000232643.1	+	lincRNA	KNOWN	LINC00385	1	2	0.482907
chr13	30196443	30196881	30196662	ENSG00000279499.1	-	TEC	KNOWN	RP11-490N5.3	1	1	0.382248
chr13	30202630	30307484	30255057	ENSG00000102781.13	-	protein_coding	KNOWN	KATNAL1	5	11	0.049628
chr13	30206616	30206699	30206657	ENSG00000266816.1	-	miRNA	NOVEL	AL356750.1	1	1	0.382248
chr13	30281765	30281869	30281817	ENSG00000252928.1	+	snRNA	KNOWN	RNU6-64P	1	1	0.239096
chr13	30296147	30296735	30296441	ENSG00000215049.3	+	processed_pseudogene	KNOWN	PRDX2P1	1	1	-0.241432
chr13	30316360	30319903	30318131	ENSG00000236463.1	-	lincRNA	KNOWN	LINC00427	1	2	0.247446
chr13	30340270	30377145	30358707	ENSG00000238121.5	-	lincRNA	KNOWN	LINC00426	9	6	0.321281
chr13	30344672	30347167	30345919	ENSG00000279149.1	+	TEC	KNOWN	RP11-374F3.5	1	1	0.517852
chr13	30419519	30422237	30420878	ENSG00000225039.1	-	lincRNA	KNOWN	LINC01058	1	2	0.056368
chr13	30427991	30428455	30428223	ENSG00000236444.3	+	processed_pseudogene	KNOWN	UBE2L5P	1	1	0.056368
chr13	30456704	30617597	30537150	ENSG00000189403.14	-	protein_coding	KNOWN	HMGB1	8	5	0.027675
chr13	30539597	30543461	30541529	ENSG00000213411.2	-	processed_pseudogene	KNOWN	RBM22P2	1	2	0.016704
chr13	30541643	30542897	30542270	ENSG00000232489.1	-	processed_pseudogene	KNOWN	MFAP1P1	1	1	0.016704
chr13	30553670	30554693	30554181	ENSG00000224117.1	+	processed_pseudogene	KNOWN	PTPN2P2	1	1	0.244801
chr13	30617693	30660770	30639231	ENSG00000132952.11	+	protein_coding	KNOWN	USPL1	3	9	0.041702
chr13	30684029	30684278	30684153	ENSG00000275788.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.266197
chr13	30713478	30764426	30738952	ENSG00000132965.9	+	protein_coding	KNOWN	ALOX5AP	3	6	0.323490
chr13	30803206	30810645	30806925	ENSG00000237879.1	+	lincRNA	KNOWN	LINC00398	1	2	0.290146
chr13	30881933	30933846	30907889	ENSG00000224743.6	-	antisense	KNOWN	TEX26-AS1	17	6	0.294665
chr13	30882551	30883395	30882973	ENSG00000236094.1	+	lincRNA	KNOWN	LINC00545	1	2	0.441576
chr13	30906191	30925572	30915881	ENSG00000102802.9	+	protein_coding	KNOWN	MEDAG	2	5	0.360130
chr13	30932703	30975502	30954102	ENSG00000175664.9	+	protein_coding	KNOWN	TEX26	4	7	0.031122
chr13	30973289	30977623	30975456	ENSG00000238185.1	-	antisense	KNOWN	RP11-252M21.6	1	3	0.391552
chr13	30995162	30996138	30995650	ENSG00000230403.1	-	lincRNA	KNOWN	LINC01066	1	2	-0.056710
chr13	31063306	31115699	31089502	ENSG00000231894.2	+	unitary_pseudogene	KNOWN	WDR95P	1	16	0.027718
chr13	31134974	31162388	31148681	ENSG00000120694.19	-	protein_coding	KNOWN	HSPH1	9	18	-0.114236
chr13	31199936	31332276	31266106	ENSG00000187676.7	+	protein_coding	KNOWN	B3GLCT	2	15	-0.176473
chr13	31311289	31312921	31312105	ENSG00000229427.1	+	processed_pseudogene	KNOWN	ANKRD26P4	1	2	-0.200459
chr13	31419989	31437999	31428994	ENSG00000278305.1	+	lincRNA	KNOWN	RP11-326L9.1	1	3	-0.396423
chr13	31483414	31483699	31483556	ENSG00000277319.1	-	unprocessed_pseudogene	KNOWN	RP11-326L9.2	1	1	-0.446222
chr13	31739542	31803388	31771465	ENSG00000133105.7	+	protein_coding	KNOWN	RXFP2	2	18	-0.137322
chr13	31846841	31953472	31900156	ENSG00000229715.4	+	transcribed_unprocessed_pseudogene	KNOWN	EEF1DP3	3	4	-0.027686
chr13	31960325	31961946	31961135	ENSG00000279314.1	-	TEC	KNOWN	RP1-257C22.2	1	1	0.024878
chr13	31975167	31975448	31975307	ENSG00000278732.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.160774
chr13	31985685	31990997	31988341	ENSG00000235822.1	+	lincRNA	KNOWN	LINC01073	1	2	-0.116080
chr13	32025314	32031639	32028476	ENSG00000237637.1	-	antisense	KNOWN	FRY-AS1	1	4	0.039941
chr13	32031300	32299122	32165211	ENSG00000073910.19	+	protein_coding	KNOWN	FRY	8	62	0.098866
chr13	32303700	32315344	32309522	ENSG00000189167.11	-	protein_coding	KNOWN	ZAR1L	2	6	0.035482
chr13	32315474	32400266	32357870	ENSG00000139618.14	+	protein_coding	KNOWN	BRCA2	7	28	-0.150449
chr13	32384660	32386108	32385384	ENSG00000215515.2	+	processed_pseudogene	KNOWN	IFIT1P1	1	1	0.050651
chr13	32400723	32428311	32414517	ENSG00000139597.17	-	protein_coding	KNOWN	N4BP2L1	12	9	0.007842
chr13	32420390	32420516	32420453	ENSG00000212293.1	-	snoRNA	NOVEL	SNORA16	1	1	-0.021537
chr13	32425358	32432954	32429156	ENSG00000270008.1	-	processed_transcript	KNOWN	RP11-298P3.4	1	2	0.035032
chr13	32432417	32538885	32485651	ENSG00000244754.8	-	protein_coding	KNOWN	N4BP2L2	15	10	0.137237
chr13	32477274	32478841	32478057	ENSG00000229800.1	+	processed_pseudogene	KNOWN	ATP8A2P2	1	1	0.163942
chr13	32504506	32509395	32506950	ENSG00000281026.1	-	sense_intronic	KNOWN	N4BP2L2-IT2	1	1	0.200141
chr13	32586427	32778019	32682223	ENSG00000083642.18	+	protein_coding	KNOWN	PDS5B	9	35	-0.099341
chr13	32763438	32763552	32763495	ENSG00000207325.1	-	misc_RNA	KNOWN	RNY1P4	1	1	-0.204726
chr13	32782874	32788178	32785526	ENSG00000277151.1	+	lincRNA	KNOWN	RP11-380B4.3	1	1	-0.497724
chr13	32877431	32911650	32894540	ENSG00000226968.1	-	lincRNA	KNOWN	LINC00423	1	4	0.049835
chr13	32954057	32954401	32954229	ENSG00000227604.3	-	processed_pseudogene	KNOWN	TOMM22P3	1	1	0.241135
chr13	33016433	33066145	33041289	ENSG00000133116.7	+	protein_coding	KNOWN	KL	2	5	-0.076258
chr13	33041352	33041443	33041397	ENSG00000221677.2	+	miRNA	NOVEL	AL161898.1	1	1	-0.281297
chr13	33103135	33350630	33226882	ENSG00000133121.20	-	protein_coding	KNOWN	STARD13	9	14	0.111004
chr13	33158587	33164409	33161498	ENSG00000230300.1	-	sense_intronic	KNOWN	STARD13-IT1	1	2	0.021982
chr13	33180401	33281584	33230992	ENSG00000236581.8	+	processed_transcript	KNOWN	STARD13-AS	48	7	0.090180
chr13	33203171	33203223	33203197	ENSG00000277160.1	+	miRNA	NOVEL	AL139187.1	1	1	-0.062731
chr13	33333679	33335277	33334478	ENSG00000227911.3	-	lincRNA	KNOWN	RP11-141M1.1	1	2	0.141179
chr13	33336216	33336716	33336466	ENSG00000277386.1	-	sense_intronic	KNOWN	RP11-141M1.4	1	1	0.141179
chr13	33336883	33336972	33336927	ENSG00000264288.1	-	miRNA	NOVEL	AL138999.1	1	1	0.141179
chr13	33355206	33676768	33515987	ENSG00000230490.2	-	lincRNA	KNOWN	RP11-141M1.3	3	6	-0.125558
chr13	33378468	33378566	33378517	ENSG00000277992.1	-	miRNA	NOVEL	AL139383.1	1	1	0.137795
chr13	33610967	33611522	33611244	ENSG00000234535.1	+	lincRNA	KNOWN	RP11-37L2.1	1	2	-0.172603
chr13	33657436	33659928	33658682	ENSG00000232986.1	+	lincRNA	KNOWN	RP11-179A7.2	1	3	0.083999
chr13	33818049	33966558	33892303	ENSG00000133119.12	+	protein_coding	KNOWN	RFC3	3	9	-0.244191
chr13	33829539	33829649	33829594	ENSG00000252397.1	-	snRNA	KNOWN	RNU5A-4P	1	1	-0.042101
chr13	33846190	33850825	33848507	ENSG00000276672.1	+	sense_intronic	KNOWN	RP11-142E9.1	1	1	-0.699858
chr13	33911992	33912081	33912036	ENSG00000263663.1	+	miRNA	NOVEL	AL161891.1	1	1	-0.212863
chr13	34079411	34080134	34079772	ENSG00000280431.1	+	TEC	KNOWN	RP11-218I21.2	1	1	-0.104405
chr13	34082429	34083310	34082869	ENSG00000227254.1	-	processed_pseudogene	KNOWN	VDAC1P12	1	1	-0.104405
chr13	34100711	34100838	34100774	ENSG00000199196.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.340533
chr13	34262863	34263090	34262976	ENSG00000278477.1	+	unprocessed_pseudogene	KNOWN	RP11-282M24.1	1	1	0.367626
chr13	34348043	34614170	34481106	ENSG00000271850.1	+	lincRNA	KNOWN	RP11-16D22.2	1	4	-0.141355
chr13	34435450	34640685	34538067	ENSG00000225179.1	-	lincRNA	KNOWN	LINC00457	2	3	-0.133635
chr13	34545929	34671182	34608555	ENSG00000271901.1	-	lincRNA	KNOWN	RP11-266E6.3	1	2	-0.149288
chr13	34574204	34574666	34574435	ENSG00000231910.1	-	processed_pseudogene	KNOWN	GAMTP2	1	1	-0.312629
chr13	34910545	34910815	34910680	ENSG00000273886.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.254566
chr13	34925834	34928076	34926955	ENSG00000261728.1	-	lincRNA	KNOWN	RP11-307O13.1	1	1	-0.254566
chr13	34942287	35673022	35307654	ENSG00000172915.18	+	protein_coding	KNOWN	NBEA	8	59	-0.411429
chr13	35185294	35186679	35185986	ENSG00000232795.1	+	processed_pseudogene	KNOWN	SCAND3P1	1	2	-0.684112
chr13	35251070	35251829	35251449	ENSG00000234835.1	+	processed_pseudogene	KNOWN	PHBP13	1	1	-0.366299
chr13	35474182	35477209	35475695	ENSG00000180660.7	-	protein_coding	KNOWN	MAB21L1	1	1	-0.237510
chr13	35494428	35494519	35494473	ENSG00000221519.2	+	miRNA	NOVEL	AL390071.1	1	1	-0.455496
chr13	35697524	35699256	35698390	ENSG00000236036.1	+	lincRNA	KNOWN	LINC00445	2	2	0.178579
chr13	35768652	36131306	35949979	ENSG00000133083.14	-	protein_coding	KNOWN	DCLK1	8	18	-0.254478
chr13	36168208	36214615	36191411	ENSG00000120669.15	-	protein_coding	KNOWN	SOHLH2	2	11	-0.491527
chr13	36168794	36297842	36233318	ENSG00000250709.1	-	protein_coding	KNOWN	CCDC169-SOHLH2	1	16	-0.430475
chr13	36222008	36297840	36259924	ENSG00000242715.7	-	protein_coding	KNOWN	CCDC169	13	9	-0.418980
chr13	36267168	36267274	36267221	ENSG00000207203.1	+	snRNA	KNOWN	RNU6-71P	1	1	-0.467436
chr13	36301638	36370180	36335909	ENSG00000133104.12	-	protein_coding	KNOWN	SPG20	11	10	-0.171838
chr13	36346431	36369601	36358016	ENSG00000120664.10	+	antisense	KNOWN	SPG20-AS1	3	6	-0.090981
chr13	36355791	36355878	36355834	ENSG00000266047.1	+	miRNA	NOVEL	AL139377.1	1	1	-0.105045
chr13	36431520	36442882	36437201	ENSG00000133101.9	+	protein_coding	KNOWN	CCNA1	4	9	-0.392042
chr13	36490078	36490441	36490259	ENSG00000223383.1	-	processed_pseudogene	KNOWN	HIST1H2APS6	1	1	-0.620206
chr13	36673912	36697839	36685875	ENSG00000180440.3	+	protein_coding	KNOWN	SERTM1	1	2	-0.499301
chr13	36728602	36728692	36728647	ENSG00000222602.1	-	miRNA	NOVEL	AL136160.1	1	1	-0.075736
chr13	36740041	36740863	36740452	ENSG00000235306.2	+	processed_pseudogene	KNOWN	GAPDHP34	1	1	-0.260310
chr13	36741878	36742465	36742171	ENSG00000223543.1	-	processed_pseudogene	KNOWN	TCEAL4P1	1	1	-0.260310
chr13	36789332	36795050	36792191	ENSG00000215486.5	+	transcribed_processed_pseudogene	KNOWN	ARL2BPP3	2	3	-0.544893
chr13	36804198	36805302	36804750	ENSG00000271337.1	-	processed_pseudogene	KNOWN	NDE1P2	1	1	-0.581780
chr13	36819224	36829104	36824164	ENSG00000133111.3	+	protein_coding	KNOWN	RFXAP	2	4	0.158663
chr13	36844831	36920765	36882798	ENSG00000120693.13	-	protein_coding	KNOWN	SMAD9	4	7	-0.010295
chr13	36849366	36850046	36849706	ENSG00000236711.2	-	sense_intronic	KNOWN	SMAD9-IT1	1	2	-0.265767
chr13	36922539	36922908	36922723	ENSG00000228825.1	+	processed_pseudogene	KNOWN	LAMTOR3P1	1	1	0.072092
chr13	36926438	36927219	36926828	ENSG00000232378.1	-	processed_pseudogene	KNOWN	RPL29P28	1	2	0.072092
chr13	36938400	36939494	36938947	ENSG00000226161.1	-	processed_pseudogene	KNOWN	EIF4A1P5	1	1	-0.155936
chr13	36949775	37000261	36975018	ENSG00000120697.8	-	protein_coding	KNOWN	ALG5	5	10	-0.136468
chr13	36998816	37009613	37004214	ENSG00000120699.12	+	protein_coding	KNOWN	EXOSC8	11	11	-0.023485
chr13	37009312	37059713	37034512	ENSG00000102710.19	-	protein_coding	KNOWN	SUPT20H	24	26	-0.309068
chr13	37020528	37020772	37020650	ENSG00000279238.1	+	protein_coding	KNOWN	AL138706.2	1	2	-0.347293
chr13	37034677	37034792	37034734	ENSG00000221100.1	-	miRNA	NOVEL	AL138706.1	1	1	-0.417022
chr13	37103259	37105664	37104461	ENSG00000180138.7	-	protein_coding	KNOWN	CSNK1A1L	1	1	-0.040004
chr13	37139176	37139585	37139380	ENSG00000274549.1	-	unprocessed_pseudogene	KNOWN	RP11-676B18.2	1	1	-0.127575
chr13	37142967	37146718	37144842	ENSG00000279511.1	-	TEC	KNOWN	RP11-676B18.1	1	1	-0.127575
chr13	37166352	37166658	37166505	ENSG00000202395.1	-	misc_RNA	KNOWN	RN7SKP1	1	1	-0.130401
chr13	37220860	37221246	37221053	ENSG00000230283.1	-	processed_pseudogene	KNOWN	RPS12P24	1	1	-0.275740
chr13	37481467	37484769	37483118	ENSG00000230390.1	-	lincRNA	KNOWN	LINC01048	1	4	0.030591
chr13	37534940	37551536	37543238	ENSG00000275226.1	+	lincRNA	KNOWN	LINC00547	1	5	-0.148341
chr13	37562583	37598844	37580713	ENSG00000133110.14	-	protein_coding	KNOWN	POSTN	10	23	-0.226508
chr13	37636636	37870425	37753530	ENSG00000133107.14	-	protein_coding	KNOWN	TRPC4	10	12	-0.299792
chr13	37854852	37854970	37854911	ENSG00000199276.1	-	rRNA	KNOWN	RNA5SP26	1	1	-0.410509
chr13	37934565	38048169	37991367	ENSG00000274317.1	+	lincRNA	KNOWN	RP11-93G5.1	1	5	-0.530411
chr13	37993085	37994720	37993902	ENSG00000228036.1	-	processed_pseudogene	KNOWN	HSPD1P9	1	1	-0.432167
chr13	38050817	38143232	38097024	ENSG00000223685.5	-	lincRNA	KNOWN	LINC00571	3	6	-0.431335
chr13	38349849	38363619	38356734	ENSG00000120686.11	+	protein_coding	KNOWN	UFM1	5	6	-0.511247
chr13	38372856	38373935	38373395	ENSG00000279025.1	+	TEC	KNOWN	RP11-131P10.2	1	1	-0.076131
chr13	38533343	38545299	38539321	ENSG00000236354.1	-	lincRNA	KNOWN	LINC00437	1	2	-0.711316
chr13	38576640	38578994	38577817	ENSG00000229437.1	+	lincRNA	KNOWN	LINC00366	1	3	-0.433328
chr13	38617419	38617940	38617679	ENSG00000234701.1	-	processed_pseudogene	KNOWN	PRDX3P3	1	1	-0.568802
chr13	38687129	38887131	38787130	ENSG00000150893.10	+	protein_coding	KNOWN	FREM2	2	24	-0.492653
chr13	38779424	38779516	38779470	ENSG00000252795.1	+	snRNA	KNOWN	RNU6-56P	1	1	-0.288612
chr13	38790644	38790754	38790699	ENSG00000212049.1	+	miRNA	NOVEL	AL590007.1	1	1	-0.307616
chr13	38821798	38827570	38824684	ENSG00000225350.1	-	antisense	KNOWN	FREM2-AS1	1	2	-0.636706
chr13	38902387	38902650	38902518	ENSG00000225221.1	+	processed_pseudogene	KNOWN	PLA2G12AP2	1	1	-0.281052
chr13	38922727	38936199	38929463	ENSG00000235550.1	-	unprocessed_pseudogene	KNOWN	ANKRD26P2	1	7	-0.643888
chr13	38965925	38991066	38978495	ENSG00000133115.11	-	protein_coding	KNOWN	STOML3	2	8	-0.453884
chr13	39009866	39038076	39023971	ENSG00000120685.19	-	protein_coding	KNOWN	PROSER1	11	13	-0.189847
chr13	39038306	39050109	39044207	ENSG00000188811.12	+	protein_coding	KNOWN	NHLRC3	6	7	-0.501321
chr13	39053072	39221927	39137499	ENSG00000273507.4	+	lincRNA	KNOWN	RP11-50D16.4	2	3	-0.474166
chr13	39169636	39169951	39169793	ENSG00000214823.3	-	processed_pseudogene	KNOWN	NXT1P1	1	1	-0.627900
chr13	39342892	39603528	39473210	ENSG00000183722.7	-	protein_coding	KNOWN	LHFP	2	4	-0.144591
chr13	39652578	39652669	39652623	ENSG00000216014.1	+	miRNA	NOVEL	AL512505.1	1	1	-0.182183
chr13	39655627	39791665	39723646	ENSG00000133103.16	+	protein_coding	KNOWN	COG6	12	20	-0.402401
chr13	39664034	39664135	39664084	ENSG00000264171.1	-	miRNA	KNOWN	MIR4305	1	1	-0.182183
chr13	39785415	39785510	39785462	ENSG00000200526.1	-	misc_RNA	KNOWN	RNY4P14	1	1	-0.178366
chr13	39817741	39818049	39817895	ENSG00000224351.2	-	processed_pseudogene	KNOWN	CDKN2AIPNLP3	1	1	0.021108
chr13	39856710	39857094	39856902	ENSG00000270444.1	-	processed_pseudogene	KNOWN	AZU1P1	1	1	-0.426245
chr13	39857135	39857227	39857181	ENSG00000212553.1	-	snoRNA	NOVEL	SNORD116	1	1	-0.426245
chr13	40079106	40273509	40176307	ENSG00000275149.1	-	lincRNA	KNOWN	RP11-427J23.1	1	4	-0.089476
chr13	40181809	40189028	40185418	ENSG00000230710.1	+	lincRNA	KNOWN	LINC00332	1	4	-0.105689
chr13	40194509	40220502	40207505	ENSG00000278772.1	-	lincRNA	KNOWN	LINC00548	1	6	-0.120281
chr13	40200007	40200122	40200064	ENSG00000280465.1	-	miRNA	NOVEL	AL356217.1	1	1	-0.028302
chr13	40224625	40224862	40224743	ENSG00000271429.1	-	processed_pseudogene	KNOWN	RPL17P51	1	1	-0.255932
chr13	40226827	40226932	40226879	ENSG00000207458.1	+	misc_RNA	KNOWN	RNY3P9	1	1	-0.255932
chr13	40343957	40350303	40347130	ENSG00000230058.1	-	lincRNA	KNOWN	RP11-172E9.2	1	2	-0.020570
chr13	40407122	40407440	40407281	ENSG00000252812.1	-	misc_RNA	KNOWN	RN7SKP2	1	1	0.260869
chr13	40450934	40535807	40493370	ENSG00000215483.8	-	lincRNA	KNOWN	LINC00598	5	7	0.268028
chr13	40555667	40666597	40611132	ENSG00000150907.6	-	protein_coding	KNOWN	FOXO1	2	3	0.003506
chr13	40618738	40621348	40620043	ENSG00000229456.1	+	processed_pseudogene	KNOWN	RLIMP1	1	3	-0.000520
chr13	40727828	40727875	40727851	ENSG00000211491.2	-	miRNA	KNOWN	MIR320D1	1	1	-0.099307
chr13	40729135	40771173	40750154	ENSG00000102738.7	-	protein_coding	KNOWN	MRPS31	4	7	-0.167068
chr13	40730981	40731253	40731117	ENSG00000277794.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.082773
chr13	40789412	40810111	40799761	ENSG00000102743.14	+	protein_coding	KNOWN	SLC25A15	4	7	0.161153
chr13	40810766	40810861	40810813	ENSG00000207652.1	+	miRNA	KNOWN	MIR621	1	1	-0.071144
chr13	40822296	40921749	40872022	ENSG00000168852.12	-	transcribed_unprocessed_pseudogene	KNOWN	TPTE2P5	4	8	-0.118450
chr13	40863599	40863902	40863750	ENSG00000176268.5	-	processed_pseudogene	KNOWN	CYCSP34	1	1	-0.484200
chr13	40882577	40921774	40902175	ENSG00000239827.8	-	transcribed_unprocessed_pseudogene	KNOWN	SUGT1P3	5	6	0.102142
chr13	40931920	41061440	40996680	ENSG00000120690.14	-	protein_coding	KNOWN	ELF1	6	9	-0.068889
chr13	40992779	40993331	40993055	ENSG00000229473.2	-	processed_pseudogene	KNOWN	RGS17P1	1	1	-0.167251
chr13	41061274	41084006	41072640	ENSG00000120688.8	+	protein_coding	KNOWN	WBP4	1	10	0.069050
chr13	41101019	41101100	41101059	ENSG00000264226.1	-	miRNA	KNOWN	MIR3168	1	1	0.219909
chr13	41121876	41122171	41122023	ENSG00000244264.3	+	misc_RNA	KNOWN	RN7SL597P	1	1	0.067744
chr13	41127569	41132746	41130157	ENSG00000165572.7	-	protein_coding	KNOWN	KBTBD6	1	1	0.090425
chr13	41132939	41236686	41184812	ENSG00000278390.4	+	antisense	KNOWN	RP11-74J13.8	4	4	0.019460
chr13	41170700	41171148	41170924	ENSG00000215482.3	-	processed_pseudogene	KNOWN	CALM2P3	1	1	-0.006189
chr13	41189833	41194566	41192199	ENSG00000120696.8	-	protein_coding	KNOWN	KBTBD7	1	1	0.201366
chr13	41199832	41200807	41200319	ENSG00000225133.1	-	processed_pseudogene	KNOWN	MORF4L1P4	1	1	0.208910
chr13	41216369	41263577	41239973	ENSG00000120662.15	-	protein_coding	KNOWN	MTRF1	10	12	0.090983
chr13	41229180	41229676	41229428	ENSG00000277662.1	-	sense_intronic	KNOWN	RP11-74J13.9	1	1	0.176056
chr13	41287741	41288320	41288030	ENSG00000231404.2	-	processed_pseudogene	KNOWN	RAC1P3	1	1	0.172912
chr13	41311205	41377030	41344117	ENSG00000172766.18	+	protein_coding	KNOWN	NAA16	11	20	-0.003134
chr13	41354557	41354659	41354608	ENSG00000223280.1	-	snRNA	KNOWN	RNU6-57P	1	1	0.054998
chr13	41384773	41385183	41384978	ENSG00000214222.2	-	processed_pseudogene	KNOWN	TUBBP2	1	1	-0.229936
chr13	41431248	41432201	41431724	ENSG00000205240.4	-	unprocessed_pseudogene	KNOWN	OR7E36P	1	1	0.100029
chr13	41439834	41440847	41440340	ENSG00000234655.3	-	unprocessed_pseudogene	KNOWN	OR7E155P	1	1	0.100029
chr13	41442770	41443666	41443218	ENSG00000215480.4	+	unprocessed_pseudogene	KNOWN	OR7E37P	1	1	0.100029
chr13	41445291	41445367	41445329	ENSG00000263907.1	+	miRNA	NOVEL	AL354833.1	1	1	0.100029
chr13	41446057	41446125	41446091	ENSG00000263928.1	-	miRNA	NOVEL	AL354833.2	1	1	0.100029
chr13	41450012	41450099	41450055	ENSG00000264042.1	+	miRNA	NOVEL	AL354833.3	1	1	0.101152
chr13	41457559	41470882	41464220	ENSG00000102760.12	+	protein_coding	KNOWN	RGCC	2	5	0.094410
chr13	41566837	41961120	41763978	ENSG00000102763.15	-	protein_coding	KNOWN	VWA8	4	45	-0.075217
chr13	41568286	41568395	41568340	ENSG00000264190.1	-	miRNA	KNOWN	MIR5006	1	1	0.405358
chr13	41807677	41807973	41807825	ENSG00000241406.3	+	misc_RNA	KNOWN	RN7SL515P	1	1	-0.062179
chr13	41863393	41863477	41863435	ENSG00000280988.1	-	miRNA	NOVEL	AL442203.1	1	1	0.217523
chr13	41905118	41905224	41905171	ENSG00000206962.1	+	snRNA	KNOWN	RNU6-74P	1	1	0.207469
chr13	41925598	41927349	41926473	ENSG00000229696.1	+	processed_pseudogene	KNOWN	KARSP1	1	1	0.171218
chr13	41955808	41981565	41968686	ENSG00000278338.4	+	antisense	KNOWN	VWA8-AS1	2	4	0.072971
chr13	42003430	42003637	42003533	ENSG00000226093.1	+	processed_pseudogene	KNOWN	RPS28P8	1	1	0.336145
chr13	42040036	42256578	42148307	ENSG00000102780.16	+	protein_coding	KNOWN	DGKH	10	31	-0.057621
chr13	42043727	42044247	42043987	ENSG00000231530.1	-	antisense	KNOWN	RP11-187A9.3	1	2	0.124596
chr13	42068932	42071093	42070012	ENSG00000237263.1	-	processed_pseudogene	KNOWN	MAPK6PS3	1	1	-0.145059
chr13	42172990	42173087	42173038	ENSG00000265679.1	-	miRNA	NOVEL	AL139328.1	1	1	0.007723
chr13	42181465	42181921	42181693	ENSG00000270809.1	-	processed_pseudogene	KNOWN	CHCHD2P11	1	1	0.007723
chr13	42255873	42256575	42256224	ENSG00000234213.1	+	processed_pseudogene	KNOWN	FHP1	1	1	-0.497006
chr13	42272153	42323267	42297710	ENSG00000023516.8	+	protein_coding	KNOWN	AKAP11	1	13	-0.337346
chr13	42369259	42369657	42369458	ENSG00000233259.4	-	processed_pseudogene	KNOWN	FABP3P2	1	1	-0.070738
chr13	42562736	42608013	42585374	ENSG00000120659.14	+	protein_coding	KNOWN	TNFSF11	5	7	-0.195240
chr13	42781550	42791549	42786549	ENSG00000179813.6	+	protein_coding	KNOWN	FAM216B	2	4	-0.399584
chr13	42810366	42812562	42811464	ENSG00000271216.1	-	lincRNA	KNOWN	LINC01050	1	3	0.017567
chr13	42842414	42842887	42842650	ENSG00000229546.1	-	lincRNA	KNOWN	LINC00428	1	2	-0.242427
chr13	42886388	42992271	42939329	ENSG00000133106.14	-	protein_coding	KNOWN	EPSTI1	10	13	-0.329674
chr13	42933858	42934892	42934375	ENSG00000238025.1	+	processed_pseudogene	KNOWN	ZDHHC4P1	1	1	-0.359219
chr13	43023203	43114224	43068713	ENSG00000120675.5	+	protein_coding	KNOWN	DNAJC15	2	6	-0.004009
chr13	43158631	43159466	43159048	ENSG00000229928.1	+	lincRNA	KNOWN	LINC00400	1	2	0.133571
chr13	43179501	43181193	43180347	ENSG00000276569.1	-	processed_pseudogene	KNOWN	RP11-460G11.2	1	1	-0.165396
chr13	43213518	43786908	43500213	ENSG00000120658.12	-	protein_coding	KNOWN	ENOX1	3	17	-0.142705
chr13	43250061	43250120	43250090	ENSG00000273697.1	-	miRNA	NOVEL	AL607148.1	1	1	0.175515
chr13	43394525	43394825	43394675	ENSG00000232540.1	+	processed_pseudogene	KNOWN	RPL36P19	1	1	-0.437476
chr13	43458465	43459484	43458974	ENSG00000238189.2	+	antisense	KNOWN	ENOX1-AS2	1	2	-0.347430
chr13	43543918	43548056	43545987	ENSG00000233821.1	+	lincRNA	KNOWN	ENOX1-AS1	1	2	-0.295031
chr13	43787591	43787852	43787721	ENSG00000270522.1	+	lincRNA	KNOWN	RP11-168P13.1	1	1	-0.019040
chr13	43823909	43879727	43851818	ENSG00000151773.12	-	protein_coding	KNOWN	CCDC122	5	7	-0.254435
chr13	43877715	43878163	43877939	ENSG00000274001.1	-	sense_intronic	KNOWN	RP11-5G9.5	1	1	-0.308188
chr13	43878214	43878307	43878260	ENSG00000276108.1	-	miRNA	NOVEL	AL512506.1	1	1	-0.308188
chr13	43879284	43893932	43886608	ENSG00000179630.10	+	protein_coding	KNOWN	LACC1	3	7	-0.291538
chr13	43883800	44028526	43956163	ENSG00000281883.1	+	protein_coding	KNOWN	RP11-65B7.2	1	13	-0.258198
chr13	43894725	43895182	43894953	ENSG00000280060.1	-	TEC	KNOWN	RP11-5G9.6	1	1	-0.246177
chr13	43908669	44030461	43969565	ENSG00000233725.7	+	lincRNA	KNOWN	LINC00284	12	5	-0.253214
chr13	43968424	43971199	43969811	ENSG00000179611.3	+	processed_pseudogene	KNOWN	DGKZP1	1	1	-0.298330
chr13	44106378	44137236	44121807	ENSG00000226519.1	-	lincRNA	KNOWN	LINC00390	1	3	-0.092370
chr13	44110451	44240517	44175484	ENSG00000227258.5	+	antisense	KNOWN	SMIM2-AS1	4	4	-0.081733
chr13	44143543	44161257	44152400	ENSG00000139656.6	-	protein_coding	KNOWN	SMIM2	2	3	-0.076349
chr13	44146470	44158222	44152346	ENSG00000235285.1	-	sense_intronic	KNOWN	SMIM2-IT1	1	3	-0.087258
chr13	44196006	44197298	44196652	ENSG00000276854.1	+	lincRNA	KNOWN	RP11-478K15.7	1	2	0.007103
chr13	44196129	44196200	44196164	ENSG00000276319.1	-	miRNA	KNOWN	MIR8079	1	1	0.007103
chr13	44234118	44243192	44238655	ENSG00000230731.2	-	lincRNA	KNOWN	RP11-478K15.6	1	3	0.019842
chr13	44369365	44369877	44369621	ENSG00000277831.1	-	lincRNA	KNOWN	RP11-269C23.5	1	1	-0.317399
chr13	44373665	44397714	44385689	ENSG00000151778.10	+	protein_coding	KNOWN	SERP2	4	5	0.134116
chr13	44400250	44405984	44403117	ENSG00000237361.2	-	lincRNA	KNOWN	TUSC8	2	2	0.044163
chr13	44432143	44577147	44504645	ENSG00000102804.14	-	protein_coding	KNOWN	TSC22D1	13	3	-0.012139
chr13	44432144	44432678	44432411	ENSG00000280357.1	+	TEC	KNOWN	RP11-269C23.4	1	1	-0.088580
chr13	44437207	44452827	44445017	ENSG00000225727.2	+	transcribed_processed_pseudogene	KNOWN	RP11-71C5.2	2	3	-0.098083
chr13	44442078	44442127	44442102	ENSG00000276862.1	-	miRNA	NOVEL	AL139184.1	1	1	-0.088580
chr13	44575893	44580432	44578162	ENSG00000278156.1	+	antisense	KNOWN	TSC22D1-AS1	2	3	0.284637
chr13	44594858	44596082	44595470	ENSG00000230793.1	+	processed_pseudogene	KNOWN	SMARCE1P5	1	1	0.190294
chr13	44651812	44701016	44676414	ENSG00000237585.1	+	lincRNA	KNOWN	LINC00407	1	3	0.070466
chr13	44684487	44715393	44699940	ENSG00000276527.1	-	lincRNA	KNOWN	RP11-442J21.2	1	2	0.184297
chr13	44799503	44809630	44804566	ENSG00000235097.1	-	lincRNA	KNOWN	LINC00330	1	3	0.221760
chr13	44939249	44989483	44964366	ENSG00000083635.7	-	protein_coding	KNOWN	NUFIP1	1	10	0.174663
chr13	44982077	45083125	45032601	ENSG00000223732.2	-	lincRNA	KNOWN	RP11-321C24.1	1	3	0.146766
chr13	44989529	45037669	45013599	ENSG00000133114.17	+	protein_coding	KNOWN	GPALPP1	7	10	0.124055
chr13	45002150	45002447	45002298	ENSG00000265802.2	+	misc_RNA	KNOWN	RN7SL49P	1	1	0.325949
chr13	45060729	45061086	45060907	ENSG00000223341.1	+	misc_RNA	KNOWN	RN7SKP3	1	1	0.136661
chr13	45120515	45284909	45202712	ENSG00000188342.11	+	protein_coding	KNOWN	GTF2F2	3	8	0.199544
chr13	45123093	45123414	45123253	ENSG00000271818.1	+	misc_RNA	KNOWN	RN7SKP4	1	1	0.282422
chr13	45124015	45124143	45124079	ENSG00000277358.1	-	unprocessed_pseudogene	KNOWN	RP11-321C24.4	1	1	0.282422
chr13	45192853	45194717	45193785	ENSG00000180332.6	-	protein_coding	KNOWN	KCTD4	1	1	0.147487
chr13	45263690	45263915	45263802	ENSG00000270381.1	+	processed_pseudogene	KNOWN	RP11-290D2.5	1	1	-0.003165
chr13	45300014	45300100	45300057	ENSG00000221163.1	-	miRNA	NOVEL	AL138963.1	1	1	0.343531
chr13	45333471	45341370	45337420	ENSG00000133112.16	-	protein_coding	KNOWN	TPT1	14	6	0.425286
chr13	45336314	45336447	45336380	ENSG00000253051.1	-	snoRNA	NOVEL	SNORA31	1	1	0.425286
chr13	45337480	45337609	45337544	ENSG00000199477.1	-	snoRNA	KNOWN	SNORA31	1	1	0.425286
chr13	45340039	45341183	45340611	ENSG00000273149.1	+	antisense	KNOWN	RP11-290D2.6	1	2	0.425286
chr13	45341345	45393413	45367379	ENSG00000170919.15	+	antisense	KNOWN	TPT1-AS1	22	11	0.486699
chr13	45350323	45351350	45350836	ENSG00000228886.1	+	lincRNA	KNOWN	RP11-290D2.3	1	2	0.527207
chr13	45390353	45391267	45390810	ENSG00000214455.4	-	processed_pseudogene	KNOWN	RCN1P2	1	1	0.325191
chr13	45393316	45418455	45405885	ENSG00000174032.16	-	protein_coding	KNOWN	SLC25A30	8	10	0.252393
chr13	45418162	45420371	45419266	ENSG00000251015.1	+	lincRNA	KNOWN	SLC25A30-AS1	1	2	0.108768
chr13	45436121	45436660	45436390	ENSG00000229303.1	+	processed_pseudogene	KNOWN	PPIAP25	1	1	0.051350
chr13	45464898	45536630	45500764	ENSG00000136152.14	+	protein_coding	KNOWN	COG3	7	23	0.096068
chr13	45534522	45615739	45575130	ENSG00000165837.11	-	protein_coding	KNOWN	ERICH6B	4	15	-0.022453
chr13	45551485	45551603	45551544	ENSG00000200709.1	-	rRNA	KNOWN	RNA5SP27	1	1	0.109270
chr13	45552863	45553136	45552999	ENSG00000232786.1	-	processed_pseudogene	KNOWN	TIMM9P3	1	1	0.109270
chr13	45671845	45672391	45672118	ENSG00000228869.1	+	processed_pseudogene	KNOWN	COX4I1P2	1	1	-0.201454
chr13	45680184	45701184	45690684	ENSG00000235366.2	-	lincRNA	KNOWN	LINC01055	1	4	-0.187110
chr13	45687548	45688469	45688008	ENSG00000237876.1	-	processed_pseudogene	KNOWN	AKR1B1P4	1	1	-0.201454
chr13	45702311	45714559	45708435	ENSG00000174015.9	+	protein_coding	KNOWN	SPERT	4	3	-0.163886
chr13	45732082	45732356	45732219	ENSG00000274357.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.307452
chr13	45732089	45732172	45732130	ENSG00000280848.1	-	miRNA	NOVEL	AL139320.1	1	1	0.307452
chr13	45777243	45851736	45814489	ENSG00000215475.4	-	protein_coding	KNOWN	SIAH3	1	2	-0.062549
chr13	45915083	45915153	45915118	ENSG00000281729.1	+	miRNA	NOVEL	AL445232.1	1	1	-0.373672
chr13	45954465	46052759	46003612	ENSG00000123200.16	-	protein_coding	KNOWN	ZC3H13	5	19	-0.338851
chr13	46052806	46113332	46083069	ENSG00000235903.7	+	antisense	KNOWN	CPB2-AS1	4	4	-0.320905
chr13	46053186	46105076	46079131	ENSG00000080618.13	-	protein_coding	KNOWN	CPB2	2	11	-0.319862
chr13	46117864	46122699	46120281	ENSG00000278937.1	+	TEC	KNOWN	RP11-139H14.5	1	1	-0.601169
chr13	46125920	46211871	46168895	ENSG00000136167.13	-	protein_coding	KNOWN	LCP1	7	19	-0.423836
chr13	46169458	46169748	46169603	ENSG00000240767.3	-	misc_RNA	KNOWN	RN7SL288P	1	1	-0.653435
chr13	46211943	46277366	46244654	ENSG00000173988.12	+	protein_coding	KNOWN	LRRC63	3	10	-0.660846
chr13	46249942	46250213	46250077	ENSG00000252854.1	+	misc_RNA	KNOWN	RN7SKP5	1	1	-0.814865
chr13	46270077	46270617	46270347	ENSG00000251106.1	+	processed_pseudogene	KNOWN	FAM206BP	1	1	-0.846608
chr13	46296445	46297844	46297144	ENSG00000261097.1	-	lincRNA	KNOWN	LINC00563	1	1	-0.069000
chr13	46342000	46438190	46390095	ENSG00000102445.18	-	protein_coding	KNOWN	KIAA0226L	12	15	-0.115959
chr13	46374401	46374590	46374495	ENSG00000223336.1	-	snRNA	KNOWN	RNU2-6P	1	1	0.166846
chr13	46410454	46410557	46410505	ENSG00000252385.1	+	snRNA	KNOWN	RNU6-68P	1	1	-0.549873
chr13	46437394	46437988	46437691	ENSG00000241353.3	-	processed_pseudogene	KNOWN	PPP1R2P4	1	1	-0.462597
chr13	46455135	46486506	46470820	ENSG00000231817.7	-	lincRNA	KNOWN	LINC01198	8	5	-0.053481
chr13	46460609	46461121	46460865	ENSG00000227019.2	+	unprocessed_pseudogene	KNOWN	OR7E101P	1	1	-0.446677
chr13	46474246	46493268	46483757	ENSG00000277228.1	+	lincRNA	KNOWN	RP11-189B4.7	1	3	0.273483
chr13	46490930	46491121	46491025	ENSG00000205105.6	+	processed_pseudogene	KNOWN	COX17P1	1	1	0.142916
chr13	46505118	46505436	46505277	ENSG00000230243.1	+	processed_pseudogene	KNOWN	FKBP1AP3	1	1	0.142916
chr13	46553168	46753040	46653104	ENSG00000136141.14	+	protein_coding	KNOWN	LRCH1	6	20	0.004829
chr13	46717423	46717688	46717555	ENSG00000278462.1	+	sense_intronic	KNOWN	RP11-165D6.1	1	1	-0.401656
chr13	46771256	46797232	46784244	ENSG00000139684.13	-	protein_coding	KNOWN	ESD	5	11	0.026014
chr13	46831550	46897076	46864313	ENSG00000102468.10	-	protein_coding	KNOWN	HTR2A	4	4	-0.339719
chr13	46852143	46856299	46854221	ENSG00000224517.6	+	antisense	KNOWN	HTR2A-AS1	3	3	-0.283976
chr13	47307082	47307301	47307191	ENSG00000234590.1	+	processed_pseudogene	KNOWN	GNG5P5	1	1	-0.297955
chr13	47458941	47459234	47459087	ENSG00000244521.3	-	misc_RNA	KNOWN	RN7SL700P	1	1	-0.323046
chr13	47763460	47764606	47764033	ENSG00000234145.1	+	processed_pseudogene	KNOWN	NAP1L4P3	1	1	-0.071894
chr13	47766640	47767085	47766862	ENSG00000229423.2	-	processed_pseudogene	KNOWN	RPL27AP8	1	1	-0.071894
chr13	47825330	47835956	47830643	ENSG00000228573.1	-	lincRNA	KNOWN	RP11-279N8.1	1	3	-0.172946
chr13	47905329	47907357	47906343	ENSG00000234689.1	-	lincRNA	KNOWN	LINC00444	1	3	-0.068473
chr13	47930153	47932622	47931387	ENSG00000260388.2	-	lincRNA	KNOWN	LINC00562	1	1	-0.557822
chr13	47936491	48001354	47968922	ENSG00000136143.14	-	protein_coding	KNOWN	SUCLA2	10	11	-0.389530
chr13	48001389	48002552	48001970	ENSG00000227848.1	+	antisense	KNOWN	SUCLA2-AS1	1	2	-0.304898
chr13	48037567	48047222	48042394	ENSG00000136159.3	+	protein_coding	KNOWN	NUDT15	1	3	-0.130401
chr13	48041751	48042184	48041967	ENSG00000276968.1	-	antisense	KNOWN	RP11-90M2.5	1	1	-0.130401
chr13	48053323	48095131	48074227	ENSG00000136146.14	-	protein_coding	KNOWN	MED4	4	8	-0.076622
chr13	48077137	48079991	48078564	ENSG00000229111.1	+	antisense	KNOWN	MED4-AS1	1	3	-0.152161
chr13	48134358	48134534	48134446	ENSG00000224510.2	-	processed_pseudogene	KNOWN	POLR2KP2	1	1	-0.521459
chr13	48233158	48270357	48251757	ENSG00000136156.12	+	protein_coding	KNOWN	ITM2B	4	6	-0.164369
chr13	48296513	48303661	48300087	ENSG00000231473.2	-	lincRNA	KNOWN	LINC00441	2	3	-0.331816
chr13	48303751	48481986	48392868	ENSG00000139687.13	+	protein_coding	KNOWN	RB1	6	27	-0.187148
chr13	48316863	48320475	48318669	ENSG00000238086.5	-	processed_pseudogene	KNOWN	PPP1R26P1	1	1	-0.117185
chr13	48328084	48328564	48328324	ENSG00000177197.7	-	processed_pseudogene	KNOWN	PCNPP5	1	1	-0.117185
chr13	48340797	48341330	48341063	ENSG00000277684.1	-	antisense	KNOWN	RP11-305D15.8	1	1	-0.010694
chr13	48389567	48444704	48417135	ENSG00000139679.15	-	protein_coding	KNOWN	LPAR6	9	11	-0.211941
chr13	48429269	48429554	48429411	ENSG00000277233.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.199612
chr13	48488959	48533256	48511107	ENSG00000136161.12	-	protein_coding	KNOWN	RCBTB2	7	15	0.224741
chr13	48532013	48532599	48532306	ENSG00000274929.1	-	sense_intronic	KNOWN	RP11-165D7.5	1	1	-0.429961
chr13	48570639	48573317	48571978	ENSG00000233456.1	-	lincRNA	KNOWN	LINC01077	1	2	0.255128
chr13	48576974	48578088	48577531	ENSG00000233610.1	-	lincRNA	KNOWN	LINC00462	1	2	0.255128
chr13	48653711	48711226	48682468	ENSG00000152207.7	+	protein_coding	KNOWN	CYSLTR2	5	6	-0.156522
chr13	48752089	48752156	48752122	ENSG00000222391.1	-	miRNA	NOVEL	AL137118.1	1	1	-0.268184
chr13	48771128	48771827	48771477	ENSG00000225131.2	+	processed_pseudogene	KNOWN	PSME2P2	1	1	-0.089847
chr13	48974967	48976867	48975917	ENSG00000275202.1	-	antisense	KNOWN	RP11-156K23.3	1	2	-0.116595
chr13	48975912	49209779	49092845	ENSG00000102531.16	+	protein_coding	KNOWN	FNDC3A	6	26	-0.078414
chr13	48987915	48988017	48987966	ENSG00000201662.1	+	snRNA	KNOWN	RNU6-60P	1	1	-0.116595
chr13	49044079	49046794	49045436	ENSG00000223724.1	-	processed_pseudogene	KNOWN	RAD17P2	1	3	-0.237856
chr13	49095391	49095492	49095441	ENSG00000199788.1	+	misc_RNA	KNOWN	RNY3P2	1	1	-0.084039
chr13	49187479	49187670	49187574	ENSG00000235957.1	-	processed_pseudogene	KNOWN	COX7CP1	1	1	0.171063
chr13	49210422	49212294	49211358	ENSG00000231665.1	-	processed_pseudogene	KNOWN	OGFOD1P1	1	2	0.157368
chr13	49220338	49222377	49221357	ENSG00000102539.5	+	protein_coding	KNOWN	MLNR	1	2	0.157368
chr13	49232874	49234399	49233636	ENSG00000274351.1	+	unprocessed_pseudogene	KNOWN	RP11-203I16.7	1	2	0.072883
chr13	49247925	49293485	49270705	ENSG00000102543.14	+	protein_coding	KNOWN	CDADC1	6	10	-0.125254
chr13	49308650	49444126	49376388	ENSG00000102547.18	-	protein_coding	KNOWN	CAB39L	12	12	0.006533
chr13	49444374	49495003	49469688	ENSG00000136169.16	+	protein_coding	KNOWN	SETDB2	5	15	-0.063425
chr13	49488970	49489364	49489167	ENSG00000236577.1	+	processed_pseudogene	KNOWN	SNRPGP14	1	2	-0.176497
chr13	49495610	49528987	49512298	ENSG00000136147.16	+	protein_coding	KNOWN	PHF11	19	12	0.267276
chr13	49531946	49585583	49558764	ENSG00000136144.11	-	protein_coding	KNOWN	RCBTB1	4	13	0.034795
chr13	49620314	49620646	49620480	ENSG00000176882.5	+	processed_pseudogene	KNOWN	RP11-432M24.4	1	1	0.186770
chr13	49628299	49633872	49631085	ENSG00000152213.3	+	protein_coding	KNOWN	ARL11	2	3	0.059443
chr13	49660723	49691475	49676099	ENSG00000123179.13	-	protein_coding	KNOWN	EBPL	7	5	0.295953
chr13	49699307	49792921	49746114	ENSG00000102753.9	-	protein_coding	KNOWN	KPNA3	2	17	-0.009730
chr13	49792886	49793307	49793096	ENSG00000276436.1	+	antisense	KNOWN	RP11-195L15.2	1	1	-0.031240
chr13	49889634	49889728	49889681	ENSG00000222148.1	-	misc_RNA	KNOWN	RNY4P30	1	1	0.091992
chr13	49890591	49892998	49891794	ENSG00000181358.3	+	processed_pseudogene	KNOWN	CTAGE10P	1	1	-0.042309
chr13	49908634	49908730	49908682	ENSG00000200064.1	-	misc_RNA	KNOWN	RNY4P9	1	1	-0.042309
chr13	49912706	49936490	49924598	ENSG00000123178.14	-	protein_coding	KNOWN	SPRYD7	4	5	0.184525
chr13	49952534	49952614	49952574	ENSG00000264526.1	-	miRNA	NOVEL	AL136123.1	1	1	0.018463
chr13	49982552	50125720	50054136	ENSG00000231607.8	-	antisense	KNOWN	DLEU2	8	14	-0.034847
chr13	49995888	50020481	50008184	ENSG00000204977.9	+	protein_coding	KNOWN	TRIM13	8	4	0.214617
chr13	49996415	49996501	49996458	ENSG00000264864.1	-	miRNA	KNOWN	MIR3613	1	1	0.057016
chr13	50015254	50020922	50018088	ENSG00000198553.8	+	protein_coding	KNOWN	KCNRG	2	3	0.426782
chr13	50044649	50044768	50044708	ENSG00000277913.1	+	misc_RNA	NOVEL	DLEU2_1	1	1	-0.165166
chr13	50045143	50045232	50045187	ENSG00000277066.1	+	misc_RNA	NOVEL	DLEU2_2	1	1	-0.165166
chr13	50048973	50049061	50049017	ENSG00000208006.1	-	miRNA	KNOWN	MIR16-1	1	1	-0.165166
chr13	50049108	50049202	50049155	ENSG00000275952.2	-	miRNA	KNOWN	MIR15A	1	1	-0.165166
chr13	50049591	50049663	50049627	ENSG00000274878.1	+	misc_RNA	NOVEL	DLEU2_3	1	1	-0.165166
chr13	50068107	50068164	50068135	ENSG00000273612.1	+	misc_RNA	NOVEL	DLEU2_4	1	1	-0.212342
chr13	50075570	50075653	50075611	ENSG00000277752.1	+	misc_RNA	NOVEL	DLEU2_5	1	1	-0.205689
chr13	50081843	50081978	50081910	ENSG00000275559.1	+	misc_RNA	NOVEL	DLEU2_6	1	1	-0.205689
chr13	50082171	50723236	50402703	ENSG00000176124.11	+	protein_coding	KNOWN	DLEU1	35	11	-0.174998
chr13	50082295	50082484	50082389	ENSG00000276089.1	+	misc_RNA	NOVEL	DLEU1_1	1	1	-0.205689
chr13	50099331	50099868	50099599	ENSG00000214359.3	+	processed_pseudogene	KNOWN	RPL18P10	1	1	-0.131841
chr13	50104833	50105174	50105003	ENSG00000273541.1	+	misc_RNA	NOVEL	DLEU1_2	1	1	-0.131841
chr13	50125816	50128463	50127139	ENSG00000274270.1	+	sense_intronic	KNOWN	RP11-34F20.7	1	1	-0.128509
chr13	50172089	50173181	50172635	ENSG00000232150.3	+	processed_pseudogene	KNOWN	ST13P4	1	1	-0.104405
chr13	50361410	50361763	50361586	ENSG00000223676.1	-	processed_pseudogene	KNOWN	RPL34P26	1	1	0.082654
chr13	50363148	50363237	50363192	ENSG00000221198.2	-	miRNA	NOVEL	AL138696.1	1	1	0.082654
chr13	50520933	50527449	50524191	ENSG00000229323.1	-	lincRNA	KNOWN	DLEU1-AS1	1	3	-0.306172
chr13	50643015	50643140	50643077	ENSG00000281190.1	+	miRNA	NOVEL	AC007304.1	1	1	-0.454290
chr13	50711008	50843939	50777473	ENSG00000186047.9	-	protein_coding	KNOWN	DLEU7	3	2	-0.109812
chr13	50807856	50849905	50828880	ENSG00000237152.3	+	antisense	KNOWN	DLEU7-AS1	1	5	-0.372645
chr13	50812988	50813106	50813047	ENSG00000200711.1	-	rRNA	KNOWN	RNA5SP28	1	1	-0.360520
chr13	50862172	50910764	50886468	ENSG00000233672.6	-	antisense	KNOWN	RNASEH2B-AS1	9	6	-0.453167
chr13	50909678	50973745	50941711	ENSG00000136104.18	+	protein_coding	KNOWN	RNASEH2B	9	12	-0.236744
chr13	50994511	51080862	51037686	ENSG00000123201.14	-	unitary_pseudogene	KNOWN	GUCY1B2	6	17	-0.223636
chr13	51027747	51027852	51027799	ENSG00000222920.1	-	rRNA	KNOWN	RNA5SP29	1	1	-0.393435
chr13	51082119	51172388	51127253	ENSG00000226792.6	-	lincRNA	KNOWN	LINC00371	3	5	-0.107527
chr13	51161723	51162357	51162040	ENSG00000214878.2	-	processed_pseudogene	KNOWN	RPL5P31	1	1	-0.314633
chr13	51180178	51180967	51180572	ENSG00000274652.1	+	lincRNA	KNOWN	RP11-457D13.4	1	1	0.149217
chr13	51195881	51196081	51195981	ENSG00000271242.1	+	processed_pseudogene	KNOWN	PRELID3BP2	1	1	-0.265560
chr13	51222334	51284241	51253287	ENSG00000150510.15	+	protein_coding	KNOWN	FAM124A	5	5	0.030321
chr13	51335773	51364735	51350254	ENSG00000253309.6	+	protein_coding	KNOWN	SERPINE3	4	11	0.065854
chr13	51348567	51348639	51348603	ENSG00000266072.1	-	miRNA	KNOWN	MIR5693	1	1	0.100870
chr13	51354077	51454264	51404170	ENSG00000102786.14	-	protein_coding	KNOWN	INTS6	20	20	-0.079860
chr13	51452367	51552364	51502365	ENSG00000236778.7	+	antisense	KNOWN	INTS6-AS1	30	6	0.094796
chr13	51454164	51461315	51457739	ENSG00000224892.6	+	transcribed_processed_pseudogene	KNOWN	RPS4XP16	3	2	0.299683
chr13	51456200	51456284	51456242	ENSG00000274190.1	-	miRNA	NOVEL	AL354820.1	1	1	0.299683
chr13	51469753	51470047	51469900	ENSG00000243900.3	+	misc_RNA	KNOWN	RN7SL320P	1	1	0.234322
chr13	51496020	51496251	51496135	ENSG00000229906.1	-	processed_pseudogene	KNOWN	SNRPGP11	1	1	-0.081157
chr13	51552589	51552667	51552628	ENSG00000266611.1	+	miRNA	KNOWN	MIR4703	1	1	0.365368
chr13	51565412	51565509	51565460	ENSG00000252141.1	+	snRNA	KNOWN	RNU6-65P	1	1	0.365368
chr13	51584455	51767707	51676081	ENSG00000139668.8	+	protein_coding	KNOWN	WDFY2	3	12	0.144088
chr13	51586424	51586532	51586478	ENSG00000206920.1	-	misc_RNA	KNOWN	RNY1P6	1	1	0.091992
chr13	51593919	51594215	51594067	ENSG00000242893.3	-	misc_RNA	KNOWN	RN7SL413P	1	1	0.143831
chr13	51598416	51599460	51598938	ENSG00000224451.2	+	processed_pseudogene	KNOWN	ATP5F1P1	1	2	0.143831
chr13	51767993	51804157	51786075	ENSG00000102796.10	-	protein_coding	KNOWN	DHRS12	9	10	0.370490
chr13	51803838	51813832	51808835	ENSG00000231856.2	+	antisense	KNOWN	RP11-327P2.5	2	2	0.296046
chr13	51813347	51845175	51829261	ENSG00000281106.2	-	lincRNA	KNOWN	LINC00282	3	5	0.214104
chr13	51861981	51866232	51864106	ENSG00000123171.6	+	protein_coding	KNOWN	CCDC70	1	2	-0.460549
chr13	51908218	51910621	51909419	ENSG00000232872.2	-	processed_pseudogene	KNOWN	CTAGE3P	1	1	-0.134264
chr13	51921251	51921587	51921419	ENSG00000279677.1	+	TEC	KNOWN	RP11-327P2.6	1	1	-0.279977
chr13	51930436	52012125	51971280	ENSG00000123191.14	-	protein_coding	KNOWN	ATP7B	16	22	-0.126361
chr13	51966742	51967149	51966945	ENSG00000236044.1	+	processed_pseudogene	KNOWN	FABP5P2	1	1	-0.171043
chr13	52012398	52029664	52021031	ENSG00000253710.2	+	protein_coding	KNOWN	ALG11	4	4	0.026237
chr13	52024691	52033600	52029145	ENSG00000253797.2	+	protein_coding	KNOWN	UTP14C	1	2	0.077043
chr13	52033611	52129078	52081344	ENSG00000197168.11	-	protein_coding	KNOWN	NEK5	4	22	-0.110747
chr13	52128891	52132723	52130807	ENSG00000273523.1	+	antisense	KNOWN	RP11-248G5.9	1	2	-0.335597
chr13	52132639	52159861	52146250	ENSG00000136098.16	-	protein_coding	KNOWN	NEK3	11	16	-0.184491
chr13	52167709	52194465	52181087	ENSG00000243406.6	-	transcribed_unprocessed_pseudogene	KNOWN	MRPS31P5	5	9	-0.224860
chr13	52167709	52291557	52229633	ENSG00000217576.7	-	processed_transcript	KNOWN	RP11-248G5.8	1	22	-0.149478
chr13	52219344	52334277	52276810	ENSG00000272281.6	-	transcribed_unprocessed_pseudogene	KNOWN	TPTE2P2	7	22	-0.239993
chr13	52334295	52341896	52338095	ENSG00000271564.1	+	lincRNA	KNOWN	RP13-444H2.1	1	3	-0.126009
chr13	52377167	52406494	52391830	ENSG00000136114.15	-	protein_coding	KNOWN	THSD1	2	5	0.229037
chr13	52400004	52400099	52400051	ENSG00000199605.1	+	misc_RNA	KNOWN	RNY4P24	1	1	0.261917
chr13	52412602	52450628	52431615	ENSG00000136100.12	-	protein_coding	KNOWN	VPS36	7	14	-0.149413
chr13	52454775	52455331	52455053	ENSG00000278238.1	-	lincRNA	KNOWN	RP11-245D16.4	1	1	0.200141
chr13	52455429	52476628	52466028	ENSG00000136108.14	+	protein_coding	KNOWN	CKAP2	7	9	0.102755
chr13	52484161	52484680	52484420	ENSG00000235660.1	-	lincRNA	KNOWN	LINC00345	1	2	-0.111292
chr13	52488993	52499305	52494149	ENSG00000244471.5	+	lincRNA	KNOWN	RP11-78J21.4	2	4	-0.151180
chr13	52497097	52500195	52498646	ENSG00000280296.1	-	TEC	KNOWN	RP11-78J21.6	1	1	-0.155492
chr13	52522632	52586906	52554769	ENSG00000198384.8	+	unprocessed_pseudogene	KNOWN	TPTE2P3	1	14	-0.401682
chr13	52600042	52642542	52621292	ENSG00000273784.4	+	processed_transcript	KNOWN	RP11-78J21.7	3	6	-0.081058
chr13	52600119	52637446	52618782	ENSG00000250299.5	+	transcribed_unprocessed_pseudogene	KNOWN	MRPS31P4	2	6	-0.085454
chr13	52640786	52643796	52642291	ENSG00000139675.11	+	protein_coding	KNOWN	HNRNPA1L2	1	1	-0.051599
chr13	52651305	52652279	52651792	ENSG00000273723.1	-	lincRNA	KNOWN	RP11-93H24.3	1	1	-0.018332
chr13	52652709	52700909	52676809	ENSG00000165416.14	+	protein_coding	KNOWN	SUGT1	4	14	-0.152480
chr13	52703264	52739812	52721538	ENSG00000136110.12	-	protein_coding	KNOWN	LECT1	3	7	-0.164872
chr13	52810044	52810139	52810091	ENSG00000211579.1	+	miRNA	KNOWN	MIR759	1	1	-0.379832
chr13	52820497	52821018	52820757	ENSG00000150276.8	+	processed_pseudogene	KNOWN	PPIAP26	1	1	-0.379832
chr13	52842889	52848641	52845765	ENSG00000136099.13	-	protein_coding	KNOWN	PCDH8	3	3	-0.281823
chr13	53028759	53052057	53040408	ENSG00000102837.6	+	protein_coding	KNOWN	OLFM4	1	5	-0.191550
chr13	53146539	53151808	53149173	ENSG00000237092.1	-	lincRNA	KNOWN	LINC01065	1	3	-0.227649
chr13	53193667	53198540	53196103	ENSG00000279325.1	+	lincRNA	KNOWN	RP11-24H2.3	1	2	-0.422581
chr13	53199981	53202753	53201367	ENSG00000225510.2	+	transcribed_processed_pseudogene	KNOWN	PCDH8P1	2	1	-0.422581
chr13	53258077	53258372	53258224	ENSG00000241613.3	+	misc_RNA	KNOWN	RN7SL618P	1	1	-0.349518
chr13	53345211	53410880	53378045	ENSG00000273919.1	+	lincRNA	KNOWN	RP11-384G23.1	1	3	-0.658016
chr13	53367845	53367956	53367900	ENSG00000220990.1	-	miRNA	NOVEL	AL450423.1	1	1	-0.665438
chr13	53408882	53409876	53409379	ENSG00000274316.1	-	unprocessed_pseudogene	KNOWN	RP11-384G23.2	1	1	-0.553343
chr13	53815419	53876119	53845769	ENSG00000261517.1	+	lincRNA	KNOWN	LINC00558	1	6	-0.616361
chr13	54115783	54132866	54124324	ENSG00000234787.7	-	lincRNA	KNOWN	LINC00458	6	5	-0.616597
chr13	54116476	54116851	54116663	ENSG00000271652.1	+	processed_pseudogene	KNOWN	RP11-168P6.2	1	1	-0.695014
chr13	54440704	54441315	54441009	ENSG00000136149.6	-	processed_pseudogene	KNOWN	RPL13AP25	1	1	-0.642027
chr13	54805867	54805957	54805912	ENSG00000266699.1	-	miRNA	NOVEL	AL512655.1	1	1	-0.625421
chr13	54940843	54986719	54963781	ENSG00000277047.4	+	lincRNA	KNOWN	RP11-108H9.1	2	6	-0.672515
chr13	55062945	55161490	55112217	ENSG00000278630.1	+	lincRNA	KNOWN	RP11-78L16.1	1	3	-0.668038
chr13	55128285	55128444	55128364	ENSG00000275071.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.712878
chr13	55174454	55174548	55174501	ENSG00000264387.1	+	miRNA	KNOWN	MIR5007	1	1	-0.622387
chr13	55535697	55583524	55559610	ENSG00000274090.1	-	lincRNA	KNOWN	RP11-415G4.1	1	3	-0.813188
chr13	55999200	56000448	55999824	ENSG00000228611.2	-	processed_pseudogene	KNOWN	HNF4GP1	1	1	-1.185542
chr13	56214373	56216942	56215657	ENSG00000228319.1	+	processed_pseudogene	KNOWN	SPATA2P1	1	2	-0.867931
chr13	56885284	56885602	56885443	ENSG00000201665.1	-	misc_RNA	KNOWN	RN7SKP6	1	1	-0.580843
chr13	57140918	57143939	57142428	ENSG00000204919.1	+	protein_coding	KNOWN	PRR20A	1	3	-0.804630
chr13	57140918	57157082	57149000	ENSG00000229665.8	+	protein_coding	KNOWN	PRR20C	2	3	-0.492605
chr13	57147488	57150509	57148998	ENSG00000204918.3	+	protein_coding	KNOWN	PRR20B	1	3	-0.684420
chr13	57160632	57163653	57162142	ENSG00000227151.4	+	protein_coding	KNOWN	PRR20D	1	3	-0.092562
chr13	57167197	57170218	57168707	ENSG00000234278.3	+	protein_coding	KNOWN	PRR20E	1	3	-0.074409
chr13	57173453	57173632	57173542	ENSG00000271140.1	+	unprocessed_pseudogene	KNOWN	PRR20FP	1	1	0.157844
chr13	57204379	57204799	57204589	ENSG00000230009.1	+	processed_pseudogene	KNOWN	MTCO2P3	1	1	-0.843878
chr13	57314739	57315909	57315324	ENSG00000234421.2	+	processed_pseudogene	KNOWN	SLC25A5P4	1	2	-0.872384
chr13	57391171	57391518	57391344	ENSG00000225352.1	-	processed_pseudogene	KNOWN	RPL31P53	1	1	-0.731130
chr13	57631810	57729311	57680560	ENSG00000118946.11	+	protein_coding	KNOWN	PCDH17	4	5	-0.680017
chr13	57632759	57633575	57633167	ENSG00000278722.1	-	antisense	KNOWN	RP11-95F22.1	1	2	-0.369739
chr13	57991350	57991464	57991407	ENSG00000202422.1	+	rRNA	KNOWN	RNA5SP30	1	1	-0.965341
chr13	58165827	58209483	58187655	ENSG00000277448.1	+	lincRNA	KNOWN	RP11-538C21.2	1	3	-0.612043
chr13	58211697	58233117	58222407	ENSG00000232954.2	-	lincRNA	KNOWN	LINC00374	1	7	-0.734969
chr13	58377513	58377774	58377643	ENSG00000276208.1	+	unprocessed_pseudogene	KNOWN	RP11-168J5.2	1	1	-0.484509
chr13	58527655	58527751	58527703	ENSG00000222733.1	-	misc_RNA	KNOWN	RNY4P29	1	1	-0.298593
chr13	58528615	58531026	58529820	ENSG00000214335.3	+	processed_pseudogene	KNOWN	CTAGE16P	1	1	-0.270454
chr13	58751047	58752233	58751640	ENSG00000223717.1	-	processed_pseudogene	KNOWN	DNAJA1P1	1	1	-0.977430
chr13	58937273	58937372	58937322	ENSG00000278150.1	+	miRNA	NOVEL	AL359262.1	1	1	-0.693609
chr13	59010332	59010604	59010468	ENSG00000214281.3	+	processed_pseudogene	KNOWN	HMGN2P39	1	1	-0.593900
chr13	59071462	59071803	59071632	ENSG00000232647.1	-	processed_pseudogene	KNOWN	POLR3KP1	1	1	-0.636706
chr13	59262680	59263391	59263035	ENSG00000271190.1	+	processed_pseudogene	KNOWN	RPP40P2	1	1	-0.418970
chr13	59480070	59480132	59480101	ENSG00000239003.1	+	snRNA	KNOWN	RNU7-88P	1	1	-0.672792
chr13	59665583	60163987	59914785	ENSG00000139734.17	-	protein_coding	KNOWN	DIAPH3	9	28	-0.317099
chr13	60012751	60044357	60028554	ENSG00000227528.5	+	antisense	KNOWN	DIAPH3-AS1	3	4	-0.197441
chr13	60034465	60034762	60034613	ENSG00000265745.2	-	misc_RNA	KNOWN	RN7SL375P	1	1	-0.127177
chr13	60144698	60153505	60149101	ENSG00000223815.1	+	antisense	KNOWN	DIAPH3-AS2	1	3	-0.054743
chr13	60187738	60187830	60187784	ENSG00000202151.1	-	misc_RNA	KNOWN	RNY4P28	1	1	-0.259481
chr13	60214352	60214946	60214649	ENSG00000227336.1	-	lincRNA	KNOWN	LINC00434	1	2	-0.119984
chr13	60274776	60276006	60275391	ENSG00000238213.1	+	processed_pseudogene	KNOWN	TARDBPP2	1	1	-0.053686
chr13	60322591	60322766	60322678	ENSG00000277549.1	+	unprocessed_pseudogene	KNOWN	RP11-359P14.3	1	1	0.025649
chr13	60396457	60573878	60485167	ENSG00000083544.13	+	protein_coding	KNOWN	TDRD3	9	14	-0.432492
chr13	60452704	60452785	60452744	ENSG00000212054.2	-	miRNA	NOVEL	AL354764.1	1	1	-0.492971
chr13	60613608	60613734	60613671	ENSG00000223076.1	+	rRNA	KNOWN	RNA5SP31	1	1	-0.317399
chr13	60636888	60638097	60637492	ENSG00000236608.1	-	processed_pseudogene	KNOWN	EIF4A1P6	1	1	-0.731130
chr13	60685199	60694528	60689863	ENSG00000225249.5	+	lincRNA	KNOWN	LINC00378	2	3	-0.461306
chr13	60730176	60733600	60731888	ENSG00000279657.1	+	TEC	KNOWN	RP11-521H3.3	1	1	-0.760451
chr13	60789560	60789661	60789610	ENSG00000206854.1	+	misc_RNA	KNOWN	RNY3P5	1	1	-0.644974
chr13	60816701	60816786	60816743	ENSG00000281390.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.525761
chr13	60917001	60941768	60929384	ENSG00000227510.3	+	lincRNA	KNOWN	LINC01442	2	2	-0.555547
chr13	61199798	61199880	61199839	ENSG00000266663.1	-	miRNA	KNOWN	MIR3169	1	1	-0.717905
chr13	61409685	61415522	61412603	ENSG00000280165.1	-	protein_coding	KNOWN	PCDH20	1	2	-0.901834
chr13	61409858	61427849	61418853	ENSG00000197991.11	-	protein_coding	KNOWN	RP11-310K10.1	1	5	-0.907108
chr13	61424689	61427946	61426317	ENSG00000279797.1	-	lincRNA	KNOWN	RP11-432J3.4	1	2	-0.908008
chr13	61760284	61760376	61760330	ENSG00000212007.3	+	miRNA	NOVEL	AL596329.1	1	1	-0.828574
chr13	61805150	61805676	61805413	ENSG00000234033.1	+	processed_pseudogene	KNOWN	RAC1P8	1	1	-0.670680
chr13	61890981	61891122	61891051	ENSG00000281714.1	-	miRNA	NOVEL	AL353765.2	1	1	-0.691690
chr13	61927090	61927272	61927181	ENSG00000270856.1	-	processed_pseudogene	KNOWN	RP11-429G17.2	1	1	-0.599886
chr13	61952980	61953070	61953025	ENSG00000274645.1	-	miRNA	NOVEL	AL353765.1	1	1	-0.736056
chr13	62003525	62029548	62016536	ENSG00000229578.2	-	lincRNA	KNOWN	LINC00358	1	2	-0.697881
chr13	62212577	62249947	62231262	ENSG00000230142.2	+	lincRNA	KNOWN	LINC01075	1	4	-0.751068
chr13	62321305	62322398	62321851	ENSG00000227611.1	+	lincRNA	KNOWN	LINC01074	1	2	-0.865448
chr13	62323657	62328833	62326245	ENSG00000229307.1	+	lincRNA	KNOWN	LINC00459	1	2	-0.865448
chr13	62327988	62328384	62328186	ENSG00000232105.1	+	processed_pseudogene	KNOWN	RPL32P28	1	1	-0.865448
chr13	62397645	62397916	62397780	ENSG00000276586.1	+	unprocessed_pseudogene	KNOWN	RP11-490P13.2	1	1	-0.701557
chr13	62406058	62406916	62406487	ENSG00000271465.1	-	processed_pseudogene	KNOWN	SQSTM1P1	1	1	-0.701557
chr13	62672285	62732359	62702322	ENSG00000228669.1	-	lincRNA	KNOWN	LINC00448	2	4	-0.842957
chr13	62919471	62919556	62919513	ENSG00000276056.1	-	miRNA	NOVEL	AL442643.1	1	1	-0.525392
chr13	63034992	63097797	63066394	ENSG00000273550.1	+	lincRNA	KNOWN	RP11-527N12.2	1	3	-0.735838
chr13	63183101	63328094	63255597	ENSG00000227564.2	-	lincRNA	KNOWN	LINC00376	1	7	-0.614579
chr13	63667681	63738018	63702849	ENSG00000231061.1	-	antisense	KNOWN	LINC00395	2	4	-0.574671
chr13	63742341	63742804	63742572	ENSG00000274052.1	+	unprocessed_pseudogene	KNOWN	OR7E156P	1	1	-0.086606
chr13	63746741	63751080	63748910	ENSG00000237378.2	+	lincRNA	KNOWN	RP11-473M10.3	3	2	-0.159530
chr13	63783801	63783904	63783852	ENSG00000202478.1	+	snRNA	KNOWN	RNU6-81P	1	1	-0.462869
chr13	63811014	63811608	63811311	ENSG00000213232.2	-	processed_pseudogene	KNOWN	PPP1R2P10	1	1	-0.395195
chr13	63828840	63844125	63836482	ENSG00000219926.10	-	lincRNA	KNOWN	RP11-394A14.2	3	6	-0.143802
chr13	63836994	63837456	63837225	ENSG00000278380.1	-	unprocessed_pseudogene	KNOWN	OR7E104P	1	1	-0.123176
chr13	63837295	63838031	63837663	ENSG00000272299.1	-	lincRNA	KNOWN	RP11-394A14.4	1	1	-0.123176
chr13	63975451	63976422	63975936	ENSG00000237849.1	-	processed_pseudogene	KNOWN	NFYAP1	1	1	-0.723925
chr13	63986371	64076011	64031191	ENSG00000227674.1	-	lincRNA	KNOWN	LINC00355	1	6	-0.614757
chr13	64712008	64712072	64712040	ENSG00000277097.1	-	miRNA	NOVEL	AL356253.1	1	1	-0.546334
chr13	64958097	64959396	64958746	ENSG00000214269.3	-	processed_pseudogene	KNOWN	LGMNP1	1	1	-0.246533
chr13	65309855	65310953	65310404	ENSG00000214266.2	-	processed_pseudogene	KNOWN	STARP1	1	2	-0.356138
chr13	65787932	65788764	65788348	ENSG00000236565.3	-	processed_pseudogene	KNOWN	HNRNPA3P5	1	1	-0.715363
chr13	65864173	65864266	65864219	ENSG00000221685.1	+	miRNA	NOVEL	AL354775.1	1	1	-0.620978
chr13	65866174	65878219	65872196	ENSG00000234767.1	+	lincRNA	KNOWN	LINC01052	1	3	-0.547547
chr13	65966330	65966429	65966379	ENSG00000263581.1	-	miRNA	KNOWN	MIR548X2	1	1	-0.409757
chr13	66218250	66218324	66218287	ENSG00000263561.1	+	miRNA	KNOWN	MIR4704	1	1	-0.255107
chr13	66268997	66270458	66269727	ENSG00000235737.1	+	processed_pseudogene	KNOWN	TRIM60P19	1	1	-0.139616
chr13	66302834	67230445	66766639	ENSG00000184226.14	-	protein_coding	KNOWN	PCDH9	6	5	-0.511775
chr13	66303871	66323561	66313716	ENSG00000234527.1	+	antisense	KNOWN	PCDH9-AS1	1	2	-0.688663
chr13	66630715	66630776	66630745	ENSG00000238500.1	-	snRNA	KNOWN	RNU7-87P	1	1	-0.396627
chr13	66825169	66915031	66870100	ENSG00000228842.3	+	antisense	KNOWN	PCDH9-AS2	2	6	-0.636269
chr13	66977432	66985776	66981604	ENSG00000225263.1	+	antisense	KNOWN	PCDH9-AS3	1	3	-0.685616
chr13	66990886	67002007	66996446	ENSG00000233840.1	+	antisense	KNOWN	PCDH9-AS4	1	3	-0.527977
chr13	67266845	67267706	67267275	ENSG00000214263.2	-	processed_pseudogene	KNOWN	RPSAP53	1	1	-0.409069
chr13	67372387	67379976	67376181	ENSG00000230040.1	+	lincRNA	KNOWN	LINC00364	1	3	-0.229936
chr13	67790407	67790794	67790600	ENSG00000271287.1	+	processed_pseudogene	KNOWN	BCRP9	1	1	-0.717677
chr13	67831876	67832827	67832351	ENSG00000227969.1	-	processed_pseudogene	KNOWN	NPM1P22	1	1	-1.069472
chr13	67902208	67903221	67902714	ENSG00000231667.2	+	unprocessed_pseudogene	KNOWN	OR7E111P	1	1	-0.379760
chr13	67910986	67911951	67911468	ENSG00000226537.2	+	unprocessed_pseudogene	KNOWN	OR7E33P	1	1	-0.348581
chr13	68289679	68291280	68290479	ENSG00000234765.1	-	processed_pseudogene	KNOWN	ELL2P3	1	1	-0.559824
chr13	68301605	68303302	68302453	ENSG00000229910.1	-	processed_pseudogene	KNOWN	HNRNPA1P18	1	2	-0.593135
chr13	68331338	68331613	68331475	ENSG00000236433.1	-	processed_pseudogene	KNOWN	RPL37P21	1	1	-0.749310
chr13	68634190	68634486	68634338	ENSG00000230405.1	+	processed_pseudogene	KNOWN	RPS3AP52	1	1	-0.467436
chr13	68654572	68655050	68654811	ENSG00000229824.1	+	processed_pseudogene	KNOWN	RPL12P34	1	1	-0.916778
chr13	68693804	68694081	68693942	ENSG00000243671.3	-	misc_RNA	KNOWN	RN7SL761P	1	1	-0.722453
chr13	68861284	68885325	68873304	ENSG00000281778.1	-	lincRNA	KNOWN	LINC00550	2	3	-0.675714
chr13	68878380	68893573	68885976	ENSG00000280580.1	+	lincRNA	KNOWN	RP11-411G9.2	1	6	-0.746050
chr13	68985058	68986064	68985561	ENSG00000232380.1	+	processed_pseudogene	KNOWN	ZDHHC20P4	1	1	-0.773991
chr13	69101832	69102056	69101944	ENSG00000225501.1	-	processed_pseudogene	KNOWN	SNRPFP3	1	1	-0.960860
chr13	69222346	69292154	69257250	ENSG00000237534.1	+	lincRNA	KNOWN	LINC00383	1	4	-0.769102
chr13	69311333	69322101	69316717	ENSG00000235221.1	+	lincRNA	KNOWN	RP11-459J23.1	1	2	-1.212863
chr13	69408216	69408735	69408475	ENSG00000224640.1	-	processed_pseudogene	KNOWN	SRSF1P1	1	1	-0.871939
chr13	69700594	70108493	69904543	ENSG00000150361.11	-	protein_coding	KNOWN	KLHL1	2	11	-0.714967
chr13	69802940	69803041	69802990	ENSG00000207495.1	+	misc_RNA	KNOWN	RNY3P10	1	1	-0.728784
chr13	69894101	69895085	69894593	ENSG00000232314.1	-	processed_pseudogene	KNOWN	PSMC1P13	1	1	-0.891520
chr13	70107213	70139429	70123321	ENSG00000230223.6	+	antisense	KNOWN	ATXN8OS	2	5	-0.628435
chr13	70459464	70459570	70459517	ENSG00000202433.1	+	snRNA	KNOWN	RNU6-54P	1	1	-0.485193
chr13	70564267	70564437	70564352	ENSG00000276841.1	-	unprocessed_pseudogene	KNOWN	RP11-475F14.1	1	1	-1.092433
chr13	70901151	70901241	70901196	ENSG00000275653.1	-	miRNA	NOVEL	AL391123.1	1	1	-0.605980
chr13	70923664	70924455	70924059	ENSG00000226554.1	+	processed_pseudogene	KNOWN	MTCL1P1	1	1	-0.886635
chr13	71015141	71168417	71091779	ENSG00000226846.1	+	lincRNA	KNOWN	LINC00348	1	4	-0.759003
chr13	71296210	71297235	71296722	ENSG00000225801.1	+	processed_pseudogene	KNOWN	RABEPKP1	1	1	-0.346378
chr13	71437966	71867192	71652579	ENSG00000276644.4	-	protein_coding	KNOWN	DACH1	4	12	-0.763468
chr13	71675067	71675469	71675268	ENSG00000236534.1	+	processed_pseudogene	KNOWN	H3F3BP1	1	1	-0.770505
chr13	71704181	71704655	71704418	ENSG00000237816.1	+	processed_pseudogene	KNOWN	RPL21P109	1	1	-0.769811
chr13	71845981	71846317	71846149	ENSG00000233460.1	+	processed_pseudogene	KNOWN	RPL35AP31	1	1	-0.702894
chr13	71913704	71914178	71913941	ENSG00000232881.2	-	processed_pseudogene	KNOWN	RPS10P21	1	1	-0.628854
chr13	71978088	71978206	71978147	ENSG00000200037.1	+	rRNA	KNOWN	RNA5SP32	1	1	-0.791911
chr13	72453902	72453967	72453934	ENSG00000212377.1	-	snoRNA	NOVEL	SNORD37	1	1	-0.402773
chr13	72460132	72460329	72460230	ENSG00000227952.2	-	processed_pseudogene	KNOWN	RPL18AP17	1	1	-0.402773
chr13	72460519	72460601	72460560	ENSG00000251715.1	-	snoRNA	NOVEL	SNORA68	1	1	-0.402773
chr13	72567213	72567380	72567296	ENSG00000278113.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.409757
chr13	72586680	72586810	72586745	ENSG00000199282.1	+	snoRNA	NOVEL	SNORA9	1	1	-0.397046
chr13	72703693	72704138	72703915	ENSG00000226617.1	+	processed_pseudogene	KNOWN	RPL21P110	1	1	-0.567779
chr13	72706017	72706123	72706070	ENSG00000206922.1	-	snRNA	KNOWN	RNU6-80P	1	1	-0.567779
chr13	72708357	72727687	72718022	ENSG00000204899.5	-	protein_coding	KNOWN	MZT1	1	3	-0.277482
chr13	72727749	72756198	72741973	ENSG00000136122.15	+	protein_coding	KNOWN	BORA	7	12	-0.187560
chr13	72752169	72782096	72767132	ENSG00000083520.14	-	protein_coding	KNOWN	DIS3	5	23	-0.192901
chr13	72782059	73016461	72899260	ENSG00000083535.15	+	protein_coding	KNOWN	PIBF1	8	18	-0.214400
chr13	72851088	72851169	72851128	ENSG00000220981.1	+	miRNA	NOVEL	AL391384.1	1	1	-0.161765
chr13	72881108	72881214	72881161	ENSG00000199381.1	-	snRNA	KNOWN	RNU6-79P	1	1	-0.743514
chr13	73036401	73036848	73036624	ENSG00000232041.1	+	processed_pseudogene	KNOWN	PSMD10P3	1	1	0.069152
chr13	73054976	73077542	73066259	ENSG00000102554.13	+	protein_coding	KNOWN	KLF5	5	4	0.051409
chr13	73100575	73100985	73100780	ENSG00000236972.2	-	processed_pseudogene	KNOWN	FABP5P1	1	1	0.240855
chr13	73112915	73113018	73112966	ENSG00000200267.1	-	snRNA	KNOWN	RNU6-66P	1	1	0.156122
chr13	73124712	73124810	73124761	ENSG00000265959.1	-	miRNA	NOVEL	AL354720.1	1	1	0.156122
chr13	73191528	73191667	73191597	ENSG00000201253.1	+	snRNA	KNOWN	RNU4-10P	1	1	-0.123176
chr13	73227147	73227260	73227203	ENSG00000206697.1	+	misc_RNA	KNOWN	RNY1P8	1	1	0.163885
chr13	73399031	73399205	73399118	ENSG00000279754.1	+	TEC	KNOWN	RP11-309J13.1	1	1	-0.043785
chr13	73407768	73408352	73408060	ENSG00000229708.1	-	processed_pseudogene	KNOWN	MARK2P12	1	1	-0.043785
chr13	73413473	73648253	73530863	ENSG00000224853.1	-	lincRNA	KNOWN	LINC00393	2	2	-0.023948
chr13	73564244	73588070	73576157	ENSG00000228295.1	+	lincRNA	KNOWN	LINC00392	1	3	0.042045
chr13	73686089	74133905	73909997	ENSG00000118922.16	-	protein_coding	KNOWN	KLF12	3	8	-0.238102
chr13	73800074	73802203	73801138	ENSG00000280348.1	+	TEC	KNOWN	RP11-552M6.1	1	1	-0.183188
chr13	73844683	73845130	73844906	ENSG00000279463.1	-	sense_intronic	KNOWN	RP11-157H4.1	1	1	-0.334017
chr13	74231457	74259976	74245716	ENSG00000235532.1	+	lincRNA	KNOWN	LINC00402	1	2	-0.310474
chr13	74289100	74289214	74289157	ENSG00000206617.1	-	misc_RNA	KNOWN	RNY1P5	1	1	-0.303493
chr13	74377163	74377951	74377557	ENSG00000232701.1	-	processed_pseudogene	KNOWN	RPL21P108	1	2	-0.254333
chr13	74412957	74419115	74416036	ENSG00000177596.1	-	lincRNA	KNOWN	RP11-512C24.3	1	2	-0.372514
chr13	74419173	74435159	74427166	ENSG00000226240.1	+	lincRNA	KNOWN	LINC00381	1	5	-0.432042
chr13	74434538	74555515	74495026	ENSG00000281167.1	+	lincRNA	KNOWN	RP11-285E18.2	1	7	-0.510692
chr13	74552503	74565445	74558974	ENSG00000236678.7	+	lincRNA	KNOWN	LINC00347	7	4	-0.684425
chr13	74828553	74830080	74829316	ENSG00000225944.1	+	processed_pseudogene	KNOWN	RIOK3P1	1	1	-0.475531
chr13	75109587	75109693	75109640	ENSG00000206812.1	+	snRNA	KNOWN	RNU6-38P	1	1	-0.391687
chr13	75136154	75136940	75136547	ENSG00000226665.1	+	processed_pseudogene	KNOWN	SSR1P2	1	1	-0.554065
chr13	75237944	75240296	75239120	ENSG00000214249.3	-	processed_pseudogene	KNOWN	CTAGE11P	1	1	-0.186164
chr13	75250480	75252012	75251246	ENSG00000223880.1	+	lincRNA	KNOWN	LINC01078	1	2	-0.282688
chr13	75284665	75482114	75383389	ENSG00000136111.12	-	protein_coding	KNOWN	TBC1D4	7	21	-0.057855
chr13	75375511	75377294	75376402	ENSG00000225203.2	-	antisense	KNOWN	RP11-182M20.2	1	3	0.218308
chr13	75525219	75549439	75537329	ENSG00000188243.12	-	protein_coding	KNOWN	COMMD6	13	5	0.069791
chr13	75549480	75606020	75577750	ENSG00000118939.17	+	protein_coding	KNOWN	UCHL3	6	9	-0.106089
chr13	75549773	75807120	75678446	ENSG00000261553.5	+	processed_transcript	KNOWN	RP11-29G8.3	2	15	0.064188
chr13	75604700	75635994	75620347	ENSG00000261105.5	-	antisense	KNOWN	LMO7-AS1	2	4	0.133343
chr13	75620434	75859870	75740152	ENSG00000136153.19	+	protein_coding	KNOWN	LMO7	27	32	0.118705
chr13	75631271	75632135	75631703	ENSG00000228444.2	+	sense_intronic	KNOWN	RP11-173B14.4	1	1	0.021602
chr13	75688556	75689197	75688876	ENSG00000230902.1	-	processed_pseudogene	KNOWN	FAM204CP	1	1	0.192596
chr13	75871038	75883811	75877424	ENSG00000178734.5	+	protein_coding	KNOWN	LMO7DN	1	4	0.030591
chr13	75876886	75881127	75879006	ENSG00000223458.2	+	sense_intronic	KNOWN	LMO7DN-IT1	1	4	0.030591
chr13	75932395	75935132	75933763	ENSG00000261206.1	-	lincRNA	KNOWN	LINC00561	1	1	-0.623555
chr13	76013023	76014501	76013762	ENSG00000224933.2	-	lincRNA	KNOWN	LINC01034	1	2	-0.622606
chr13	76134931	76135225	76135078	ENSG00000243274.3	+	misc_RNA	KNOWN	RN7SL571P	1	1	-0.526329
chr13	76880166	76886390	76883278	ENSG00000178695.5	-	protein_coding	KNOWN	KCTD12	1	1	-0.533160
chr13	76886321	76886400	76886360	ENSG00000264908.1	-	miRNA	NOVEL	AC000403.1	1	1	-0.533160
chr13	76887551	76891135	76889343	ENSG00000278727.1	+	lincRNA	KNOWN	AC000403.4	1	1	-0.348825
chr13	76928066	76928836	76928451	ENSG00000118903.6	+	processed_pseudogene	KNOWN	BTF3P11	1	2	-0.305012
chr13	76948497	76958642	76953569	ENSG00000102794.9	+	protein_coding	KNOWN	IRG1	2	5	-0.174189
chr13	76981175	76981916	76981545	ENSG00000233873.1	-	processed_pseudogene	KNOWN	RPL7P44	1	1	0.110139
chr13	76984868	76987943	76986405	ENSG00000228002.2	+	processed_pseudogene	KNOWN	DHX9P1	1	1	0.110139
chr13	76990660	77002517	76996588	ENSG00000102805.13	+	protein_coding	KNOWN	CLN5	3	4	0.045198
chr13	76992598	77027195	77009896	ENSG00000005812.10	-	protein_coding	KNOWN	FBXL3	6	5	-0.100281
chr13	77027944	77028482	77028213	ENSG00000274898.1	+	lincRNA	KNOWN	AC001226.7	1	1	-0.247495
chr13	77044655	77327050	77185852	ENSG00000005810.17	-	protein_coding	KNOWN	MYCBP2	12	84	-0.249198
chr13	77075514	77129717	77102615	ENSG00000236051.6	+	antisense	KNOWN	MYCBP2-AS1	9	4	-0.312765
chr13	77080511	77081190	77080850	ENSG00000229521.2	-	sense_intronic	KNOWN	MYCBP2-AS2	1	2	-0.390160
chr13	77535674	77645263	77590468	ENSG00000136155.16	+	protein_coding	KNOWN	SCEL	5	33	-0.578202
chr13	77599755	77606551	77603153	ENSG00000224347.6	-	antisense	KNOWN	SCEL-AS1	2	4	-0.475693
chr13	77623372	77623472	77623422	ENSG00000206800.1	+	misc_RNA	KNOWN	RNY3P7	1	1	-0.732921
chr13	77659413	77659664	77659538	ENSG00000227922.1	+	processed_pseudogene	KNOWN	SPTLC1P5	1	1	-0.676061
chr13	77697854	77764242	77731048	ENSG00000139737.21	+	protein_coding	KNOWN	SLAIN1	17	8	-0.472888
chr13	77698012	77698116	77698064	ENSG00000266325.1	-	miRNA	KNOWN	MIR3665	1	1	-0.571645
chr13	77828222	77833950	77831086	ENSG00000225579.1	+	lincRNA	KNOWN	EDNRB-AS1	1	5	-0.685952
chr13	77895481	77919768	77907624	ENSG00000136160.14	-	protein_coding	KNOWN	EDNRB	4	8	-0.528876
chr13	77919689	78617328	78268508	ENSG00000234377.7	+	antisense	KNOWN	RNF219-AS1	14	6	-0.505665
chr13	77939162	77944874	77942018	ENSG00000233379.1	-	lincRNA	KNOWN	RP11-318G21.4	1	2	-0.568259
chr13	77947497	77947772	77947634	ENSG00000243035.3	-	misc_RNA	KNOWN	RN7SL810P	1	1	-0.568259
chr13	77989372	77990646	77990009	ENSG00000236133.1	-	lincRNA	KNOWN	LINC01069	1	2	-0.349971
chr13	78012883	78053595	78033239	ENSG00000229249.6	+	lincRNA	KNOWN	LINC00446	2	5	-0.585787
chr13	78275720	78277514	78276617	ENSG00000235625.1	-	lincRNA	KNOWN	RP11-203P2.2	1	2	-0.637361
chr13	78285838	78286288	78286063	ENSG00000271386.1	+	processed_pseudogene	KNOWN	SRGNP1	1	1	-0.637361
chr13	78355227	78355328	78355277	ENSG00000200686.1	-	misc_RNA	KNOWN	RNY3P3	1	1	-0.663904
chr13	78422823	78423192	78423007	ENSG00000229865.1	+	processed_pseudogene	KNOWN	RPL31P54	1	1	-0.425067
chr13	78488182	78488513	78488347	ENSG00000224686.1	+	processed_pseudogene	KNOWN	TCEB1P23	1	1	-0.608448
chr13	78596129	78599619	78597874	ENSG00000271776.1	+	antisense	KNOWN	RP11-52L5.6	1	1	-0.382917
chr13	78598362	78603560	78600961	ENSG00000152192.7	-	protein_coding	KNOWN	POU4F1	1	2	-0.382917
chr13	78614291	78659179	78636735	ENSG00000152193.7	-	protein_coding	KNOWN	RNF219	1	6	-0.064369
chr13	78665838	78665930	78665884	ENSG00000263868.1	+	miRNA	NOVEL	AL139319.1	1	1	-0.353246
chr13	78761175	78761651	78761413	ENSG00000237109.1	+	processed_pseudogene	KNOWN	RPL21P111	1	1	-0.527736
chr13	78787319	78792307	78789813	ENSG00000225427.1	-	lincRNA	KNOWN	LINC00331	1	3	-0.643651
chr13	78849231	78851208	78850219	ENSG00000215357.2	+	processed_pseudogene	KNOWN	HSPD1P8	1	2	-0.503849
chr13	78908919	78910542	78909730	ENSG00000230584.1	+	processed_pseudogene	KNOWN	CCT5P2	1	1	-0.724715
chr13	79090783	79094119	79092451	ENSG00000236277.1	+	processed_pseudogene	KNOWN	NIPA2P5	1	2	-0.462869
chr13	79166119	79166885	79166502	ENSG00000226670.1	+	processed_pseudogene	KNOWN	BCAS2P3	1	1	-0.619211
chr13	79311824	79406477	79359150	ENSG00000139746.15	-	protein_coding	KNOWN	RBM26	7	22	-0.272329
chr13	79389534	79389631	79389582	ENSG00000252496.1	-	rRNA	KNOWN	RNA5SP33	1	1	-0.458205
chr13	79406309	79424328	79415318	ENSG00000227354.6	+	antisense	KNOWN	RBM26-AS1	4	7	0.113427
chr13	79477364	79481231	79479297	ENSG00000232132.1	-	antisense	KNOWN	NDFIP2-AS1	1	3	-0.453658
chr13	79481124	79556075	79518599	ENSG00000102471.13	+	protein_coding	KNOWN	NDFIP2	6	8	-0.276164
chr13	79566727	79571436	79569081	ENSG00000227676.3	+	lincRNA	KNOWN	LINC01068	2	3	-0.183893
chr13	79804418	79805685	79805051	ENSG00000229011.1	+	lincRNA	KNOWN	LINC01038	1	2	-0.214670
chr13	79872586	79917944	79895265	ENSG00000229175.1	+	lincRNA	KNOWN	LINC00382	1	6	0.055871
chr13	80011077	80028283	80019680	ENSG00000281721.1	+	lincRNA	KNOWN	LINC01080	1	2	-0.037888
chr13	80335976	80340951	80338463	ENSG00000136158.10	-	protein_coding	KNOWN	SPRY2	3	3	0.091992
chr13	80369426	80369534	80369480	ENSG00000202398.1	-	snRNA	KNOWN	RNU6-61P	1	1	-0.179035
chr13	80619098	80620067	80619582	ENSG00000227862.1	-	processed_pseudogene	KNOWN	HNRNPA1P31	1	1	-0.388440
chr13	80654755	80657027	80655891	ENSG00000226683.2	+	processed_pseudogene	KNOWN	PWWP2AP1	1	1	-0.632374
chr13	80888348	80888867	80888607	ENSG00000231222.1	+	processed_pseudogene	KNOWN	ARF4P4	1	1	-0.404434
chr13	81043670	81044442	81044056	ENSG00000229246.1	+	lincRNA	KNOWN	LINC00377	1	2	-1.186868
chr13	81114866	81115295	81115080	ENSG00000270415.1	-	processed_pseudogene	KNOWN	DPPA3P3	1	1	-0.557321
chr13	81204263	81204356	81204309	ENSG00000238980.2	-	miRNA	NOVEL	AL354806.1	1	1	-0.869940
chr13	81225865	81226983	81226424	ENSG00000260094.1	-	lincRNA	KNOWN	LINC00564	1	1	-0.466498
chr13	81250438	81302407	81276422	ENSG00000229309.2	+	lincRNA	KNOWN	RP11-452B18.2	1	6	-0.637516
chr13	81265747	81265837	81265792	ENSG00000222486.1	+	snRNA	KNOWN	RNU6-77P	1	1	-0.711316
chr13	81272891	81273170	81273030	ENSG00000237148.1	+	processed_pseudogene	KNOWN	HIGD1AP2	1	1	-0.686981
chr13	81689911	81691072	81690491	ENSG00000214182.5	+	transcribed_processed_pseudogene	KNOWN	PTMAP5	2	1	-0.742297
chr13	82823131	82824136	82823633	ENSG00000237099.1	+	processed_pseudogene	KNOWN	GYG1P2	1	1	-0.276048
chr13	83145540	83145903	83145721	ENSG00000270400.1	+	processed_pseudogene	KNOWN	RP11-464I4.1	1	1	-0.269196
chr13	83298071	83298167	83298119	ENSG00000222791.1	-	snRNA	KNOWN	RNU6-67P	1	1	-0.272062
chr13	83877205	83882393	83879799	ENSG00000178235.7	-	protein_coding	KNOWN	SLITRK1	1	1	-0.375787
chr13	83907301	83907781	83907541	ENSG00000215037.2	-	processed_pseudogene	KNOWN	VENTXP2	1	1	-0.320062
chr13	84020327	84020762	84020544	ENSG00000224188.1	+	processed_pseudogene	KNOWN	UBE2D3P4	1	1	-0.184218
chr13	84520103	84521568	84520835	ENSG00000228597.1	+	processed_pseudogene	KNOWN	MTND4P1	1	1	-0.285571
chr13	84521725	84523915	84522820	ENSG00000232447.1	+	processed_pseudogene	KNOWN	MTND5P3	1	2	-0.285571
chr13	84562364	84563236	84562800	ENSG00000233349.1	+	lincRNA	KNOWN	LINC00333	1	3	-0.458822
chr13	85065087	85078920	85072003	ENSG00000226370.1	-	lincRNA	KNOWN	LINC00375	1	5	-0.354487
chr13	85363601	85544570	85454085	ENSG00000226317.2	+	lincRNA	KNOWN	LINC00351	1	4	-0.337340
chr13	85584748	85584853	85584800	ENSG00000207012.1	-	snRNA	KNOWN	RNU6-72P	1	1	-0.466498
chr13	85792790	85799488	85796139	ENSG00000184564.8	-	protein_coding	KNOWN	SLITRK6	1	2	-0.384446
chr13	85837126	85837532	85837329	ENSG00000278580.1	-	unprocessed_pseudogene	KNOWN	RP11-272M24.2	1	1	-0.533613
chr13	85968999	85969533	85969266	ENSG00000228241.1	+	processed_pseudogene	KNOWN	MOB1AP1	1	1	-1.172711
chr13	86060813	86170890	86115851	ENSG00000232252.1	+	lincRNA	KNOWN	RP11-30L8.1	1	3	-0.740319
chr13	86275493	86277262	86276377	ENSG00000277914.1	+	processed_pseudogene	KNOWN	DDX6P2	1	2	-0.292672
chr13	86725500	86726053	86725776	ENSG00000231879.1	+	processed_pseudogene	KNOWN	TXNL1P1	1	1	-0.452707
chr13	86909586	86937108	86923347	ENSG00000233528.4	+	lincRNA	KNOWN	LINC00430	2	4	-0.784598
chr13	87219004	87219269	87219136	ENSG00000228074.1	+	processed_pseudogene	KNOWN	UBBP5	1	1	-0.710328
chr13	87379472	87380258	87379865	ENSG00000228473.1	-	processed_pseudogene	KNOWN	LIN28AP2	1	2	-0.534391
chr13	87427200	87447235	87437217	ENSG00000232636.2	-	lincRNA	KNOWN	RP11-342C20.2	1	4	-0.983707
chr13	87427214	87671259	87549236	ENSG00000228824.6	-	lincRNA	KNOWN	MIR4500HG	5	6	-0.698685
chr13	87607907	87609234	87608570	ENSG00000272515.1	-	lincRNA	KNOWN	RP11-29P20.1	1	1	-0.712992
chr13	87618665	87618740	87618702	ENSG00000266052.1	-	miRNA	KNOWN	MIR4500	1	1	-0.657601
chr13	87672615	87696272	87684443	ENSG00000165300.7	+	protein_coding	KNOWN	SLITRK5	1	2	-0.363196
chr13	87765752	87765881	87765816	ENSG00000277640.1	-	processed_pseudogene	KNOWN	RP11-471M2.4	1	1	-0.677888
chr13	87801036	87803808	87802422	ENSG00000223404.3	-	lincRNA	KNOWN	LINC00397	2	3	-0.729863
chr13	87807634	87811232	87809433	ENSG00000272046.1	-	lincRNA	KNOWN	RP11-471M2.3	1	1	-0.709582
chr13	87890172	87892472	87891322	ENSG00000232204.1	-	processed_pseudogene	KNOWN	TET1P1	1	1	-0.647244
chr13	88142867	88236082	88189474	ENSG00000231019.1	+	lincRNA	KNOWN	RP11-545P6.2	1	5	-0.580224
chr13	88187859	88187920	88187889	ENSG00000223059.1	-	miRNA	NOVEL	AL354896.1	1	1	-0.776364
chr13	88236547	88236969	88236758	ENSG00000225289.1	-	processed_pseudogene	KNOWN	RPL29P29	1	1	-0.590038
chr13	88540864	88545509	88543186	ENSG00000229443.1	+	lincRNA	KNOWN	LINC00433	2	3	-0.574271
chr13	88626853	88630397	88628625	ENSG00000261666.1	+	lincRNA	KNOWN	LINC00560	1	2	-1.317416
chr13	88978447	88978785	88978616	ENSG00000233211.2	-	processed_pseudogene	KNOWN	GRPEL2P1	1	1	-0.537640
chr13	89214847	89236890	89225868	ENSG00000232225.6	-	lincRNA	KNOWN	LINC01047	2	5	-0.641737
chr13	89248818	89250100	89249459	ENSG00000227247.1	-	processed_pseudogene	KNOWN	TRIM60P13	1	1	-0.512125
chr13	89273203	89280240	89276721	ENSG00000234660.1	+	lincRNA	KNOWN	LINC00440	1	2	-0.562873
chr13	89361160	89363224	89362192	ENSG00000225530.1	-	processed_pseudogene	KNOWN	SP3P	1	1	-0.767527
chr13	89477608	89500509	89489058	ENSG00000226037.1	-	lincRNA	KNOWN	LINC01040	1	2	-0.377725
chr13	89548691	89553804	89551247	ENSG00000236176.2	-	lincRNA	KNOWN	LINC00353	1	3	-0.492188
chr13	89551233	89552389	89551811	ENSG00000271395.1	+	lincRNA	KNOWN	RP11-75N6.3	1	2	-0.459912
chr13	89783883	89783968	89783925	ENSG00000275813.1	-	miRNA	NOVEL	AL355821.1	1	1	-0.925082
chr13	89833157	89833941	89833549	ENSG00000234227.1	-	processed_pseudogene	KNOWN	RPL7L1P1	1	1	-0.773707
chr13	89837170	89837237	89837203	ENSG00000200733.1	+	snoRNA	NOVEL	SNORD38	1	1	-0.773707
chr13	89991831	89992878	89992354	ENSG00000215418.2	+	processed_pseudogene	KNOWN	PEX12P1	1	1	-0.447034
chr13	90060247	90119719	90089983	ENSG00000261446.2	-	lincRNA	KNOWN	LINC00559	1	6	-0.777544
chr13	90135712	90135841	90135776	ENSG00000252696.1	-	rRNA	KNOWN	RNA5SP34	1	1	-0.977430
chr13	90170866	90171799	90171332	ENSG00000235879.1	+	processed_pseudogene	KNOWN	FAR1P1	1	1	-0.624215
chr13	90230384	90231682	90231033	ENSG00000224419.1	+	processed_pseudogene	KNOWN	KRT18P27	1	1	-0.387405
chr13	90231182	90231277	90231229	ENSG00000207858.1	+	miRNA	KNOWN	MIR622	1	1	-0.387405
chr13	90493287	90535080	90514183	ENSG00000234384.1	+	lincRNA	KNOWN	LINC01049	1	6	-0.462541
chr13	90781766	90781869	90781817	ENSG00000251753.1	-	snRNA	KNOWN	RNU6-75P	1	1	-0.639191
chr13	90890954	90926597	90908775	ENSG00000231674.1	-	lincRNA	KNOWN	LINC00410	1	6	-0.574367
chr13	91023732	91023954	91023843	ENSG00000227983.1	-	processed_pseudogene	KNOWN	BRK1P2	1	1	-0.794351
chr13	91087254	91089593	91088423	ENSG00000234625.1	-	lincRNA	KNOWN	LINC00380	1	2	-0.463908
chr13	91127613	91131407	91129510	ENSG00000229557.1	-	lincRNA	KNOWN	LINC00379	2	3	-0.417335
chr13	91272081	91272577	91272329	ENSG00000214178.3	-	processed_pseudogene	KNOWN	PPIAP23	1	1	-0.783750
chr13	91347820	91354579	91351199	ENSG00000215417.10	+	processed_transcript	KNOWN	MIR17HG	3	4	-0.396332
chr13	91350605	91350688	91350646	ENSG00000275042.1	+	miRNA	KNOWN	MIR17	1	1	-0.308971
chr13	91350743	91350834	91350788	ENSG00000274160.1	+	miRNA	KNOWN	MIR18A	1	1	-0.308971
chr13	91350891	91350972	91350931	ENSG00000277328.1	+	miRNA	KNOWN	MIR19A	1	1	-0.308971
chr13	91351065	91351135	91351100	ENSG00000275534.1	+	miRNA	KNOWN	MIR20A	1	1	-0.308971
chr13	91351192	91351278	91351235	ENSG00000275802.1	+	miRNA	KNOWN	MIR19B1	1	1	-0.308971
chr13	91351314	91351393	91351353	ENSG00000276018.1	+	miRNA	KNOWN	MIR92A1	1	1	-0.308971
chr13	91379595	91379713	91379654	ENSG00000281253.1	-	miRNA	NOVEL	AL138714.1	1	1	-0.501688
chr13	91398607	92873682	92136144	ENSG00000179399.14	+	protein_coding	KNOWN	GPC5	4	8	-0.590674
chr13	91485793	91486870	91486331	ENSG00000282864.1	+	TEC	KNOWN	RP11-487A2.1	1	1	-0.616353
chr13	91585934	91586041	91585987	ENSG00000280901.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.479915
chr13	91994518	91996523	91995520	ENSG00000282997.1	+	sense_intronic	KNOWN	RP11-95C14.1	1	1	-0.414469
chr13	92059844	92059969	92059906	ENSG00000252508.1	+	snRNA	KNOWN	RNU4ATAC3P	1	1	-0.746257
chr13	92180715	92180885	92180800	ENSG00000229287.1	-	processed_pseudogene	KNOWN	FABP5P4	1	1	-0.166160
chr13	92239835	92241951	92240893	ENSG00000282865.1	-	TEC	KNOWN	RP11-306O1.2	1	1	-0.564355
chr13	92339794	92340603	92340198	ENSG00000232885.1	-	antisense	KNOWN	GPC5-AS2	1	2	-0.696504
chr13	92446470	92449056	92447763	ENSG00000283097.1	+	TEC	KNOWN	RP11-165N12.2	1	1	-0.540276
chr13	92484606	92510094	92497350	ENSG00000236240.1	+	sense_intronic	KNOWN	GPC5-IT1	1	2	-0.737724
chr13	92490163	92490220	92490191	ENSG00000263741.1	+	miRNA	KNOWN	MIR548AS	1	1	-0.762467
chr13	92658994	92659227	92659110	ENSG00000282993.1	-	TEC	KNOWN	RP11-118A1.2	1	1	-0.617752
chr13	92701389	92721614	92711501	ENSG00000235984.5	-	antisense	KNOWN	GPC5-AS1	2	4	-0.630333
chr13	93056657	93057926	93057291	ENSG00000232849.1	+	lincRNA	KNOWN	LINC00363	1	2	-0.501849
chr13	93226612	93227317	93226964	ENSG00000278177.1	-	antisense	KNOWN	RP11-632L2.2	1	1	-0.091971
chr13	93226842	94407401	93817121	ENSG00000183098.10	+	protein_coding	KNOWN	GPC6	2	9	-0.295892
chr13	93394977	93395855	93395416	ENSG00000235784.2	-	processed_pseudogene	KNOWN	HNRNPA1P29	1	1	-0.418203
chr13	93818424	93836144	93827284	ENSG00000224394.1	-	antisense	KNOWN	GPC6-AS2	1	3	-0.223346
chr13	94025470	94025598	94025534	ENSG00000212559.1	-	rRNA	KNOWN	RNA5SP35	1	1	-0.477864
chr13	94154193	94187991	94171092	ENSG00000236520.2	-	antisense	KNOWN	GPC6-AS1	1	4	-0.315327
chr13	94436808	94479682	94458245	ENSG00000080166.15	-	protein_coding	KNOWN	DCT	5	10	-0.244912
chr13	94465300	94465390	94465345	ENSG00000212057.1	-	miRNA	NOVEL	AL139318.1	1	1	-0.047283
chr13	94574051	94596257	94585154	ENSG00000088451.10	-	protein_coding	KNOWN	TGDS	3	12	-0.352147
chr13	94601903	94634645	94618274	ENSG00000152749.7	+	protein_coding	KNOWN	GPR180	1	9	-0.221582
chr13	94651397	94651529	94651463	ENSG00000222129.1	-	rRNA	KNOWN	RNA5SP36	1	1	-0.243799
chr13	94699223	94699502	94699362	ENSG00000274168.1	-	misc_RNA	KNOWN	RN7SL585P	1	1	0.002724
chr13	94699694	94702862	94701278	ENSG00000238230.1	-	lincRNA	KNOWN	LINC00391	1	3	0.002724
chr13	94709622	94712399	94711010	ENSG00000125285.5	-	protein_coding	KNOWN	SOX21	1	1	-0.091838
chr13	94712716	94716246	94714481	ENSG00000227640.2	+	lincRNA	KNOWN	SOX21-AS1	1	2	-0.106692
chr13	94757451	94759272	94758361	ENSG00000235768.1	-	processed_pseudogene	KNOWN	BRD7P5	1	1	-0.492971
chr13	94760553	94761015	94760784	ENSG00000237924.1	-	processed_pseudogene	KNOWN	RPL21P112	1	1	-0.492971
chr13	94960041	94961319	94960680	ENSG00000260962.1	+	lincRNA	KNOWN	LINC00557	1	1	0.065520
chr13	95019235	95019336	95019285	ENSG00000252335.1	+	snRNA	KNOWN	RNU6-62P	1	1	-0.586080
chr13	95019829	95301446	95160637	ENSG00000125257.13	-	protein_coding	KNOWN	ABCC4	7	31	-0.048249
chr13	95310830	95310955	95310892	ENSG00000223298.1	-	misc_RNA	KNOWN	RNY3P8	1	1	-0.092091
chr13	95336106	95336201	95336153	ENSG00000200211.1	-	misc_RNA	KNOWN	RNY4P27	1	1	0.128288
chr13	95394049	95394454	95394251	ENSG00000271492.1	+	processed_pseudogene	KNOWN	MEMO1P5	1	1	0.273512
chr13	95433604	95579759	95506681	ENSG00000134873.9	+	protein_coding	KNOWN	CLDN10	3	5	-0.155359
chr13	95479444	95533910	95506677	ENSG00000223392.1	-	antisense	KNOWN	CLDN10-AS1	1	4	-0.203846
chr13	95578202	95644703	95611452	ENSG00000134874.17	-	protein_coding	KNOWN	DZIP1	8	23	-0.029980
chr13	95648733	95676925	95662829	ENSG00000247400.3	-	lincRNA	KNOWN	DNAJC3-AS1	2	2	-0.042049
chr13	95677139	95794989	95736064	ENSG00000102580.14	+	protein_coding	KNOWN	DNAJC3	2	12	-0.069674
chr13	95692538	95693972	95693255	ENSG00000229622.1	+	processed_pseudogene	KNOWN	MTND5P2	1	2	0.040153
chr13	95693983	95694495	95694239	ENSG00000227714.1	-	processed_pseudogene	KNOWN	MTND6P18	1	1	0.040153
chr13	95694569	95695705	95695137	ENSG00000232373.2	+	processed_pseudogene	KNOWN	MTCYBP3	1	1	0.040153
chr13	95744726	95745765	95745245	ENSG00000276809.1	+	sense_intronic	KNOWN	RP11-10E18.7	1	1	-0.241746
chr13	95801580	96053482	95927531	ENSG00000102595.18	-	protein_coding	KNOWN	UGGT2	12	39	-0.367403
chr13	95809310	95809607	95809458	ENSG00000226977.1	-	processed_pseudogene	KNOWN	HMGN1P24	1	1	-0.028933
chr13	96090839	96839562	96465200	ENSG00000185352.8	+	protein_coding	KNOWN	HS6ST3	2	2	-0.448858
chr13	96169545	96169847	96169696	ENSG00000242614.3	+	misc_RNA	KNOWN	RN7SL164P	1	1	-0.389717
chr13	96573659	96574499	96574079	ENSG00000233273.1	+	processed_pseudogene	KNOWN	AMMECR1LP1	1	1	-0.362267
chr13	96883842	96885821	96884831	ENSG00000235137.2	-	processed_pseudogene	KNOWN	HSP90AB6P	1	1	-0.434445
chr13	96941281	96984172	96962726	ENSG00000243300.2	-	lincRNA	KNOWN	LINC00359	2	3	-0.275578
chr13	96947637	96948927	96948282	ENSG00000234267.2	-	transcribed_processed_pseudogene	KNOWN	TULP3P1	1	1	-0.422581
chr13	96948018	96949584	96948801	ENSG00000272329.1	+	lincRNA	KNOWN	RP11-65L19.4	2	2	-0.422581
chr13	96949249	96949533	96949391	ENSG00000222472.1	-	misc_RNA	KNOWN	RN7SKP7	1	1	-0.422581
chr13	96985719	96994730	96990224	ENSG00000165621.8	-	protein_coding	KNOWN	OXGR1	4	4	-0.264568
chr13	97172469	97179622	97176045	ENSG00000233124.1	-	lincRNA	KNOWN	LINC00456	1	2	-0.539921
chr13	97221434	97394120	97307777	ENSG00000139793.18	+	protein_coding	KNOWN	MBNL2	6	11	-0.073778
chr13	97362972	97363101	97363036	ENSG00000202290.1	-	rRNA	KNOWN	RNA5SP37	1	1	-0.100653
chr13	97363007	97363069	97363038	ENSG00000281389.1	-	miRNA	NOVEL	AL442067.1	1	1	-0.100653
chr13	97434222	97469128	97451675	ENSG00000125249.6	+	protein_coding	KNOWN	RAP2A	2	3	-0.349914
chr13	97435946	97436168	97436057	ENSG00000276573.1	+	sense_intronic	KNOWN	RP11-128N14.5	1	1	-0.103264
chr13	97437268	97437630	97437449	ENSG00000276704.1	+	sense_intronic	KNOWN	RP11-128N14.4	1	1	-0.103264
chr13	97475742	97476459	97476100	ENSG00000271625.1	+	processed_pseudogene	KNOWN	PSMA6P4	1	1	-0.180380
chr13	97675011	97677963	97676487	ENSG00000226134.1	-	lincRNA	KNOWN	RP11-120E13.1	1	2	-0.093564
chr13	97901653	97902288	97901970	ENSG00000233291.1	+	processed_pseudogene	KNOWN	RPL7AP61	1	1	-0.027423
chr13	97939356	97953539	97946447	ENSG00000270725.1	+	lincRNA	KNOWN	RP11-383H17.4	1	2	0.027529
chr13	97953658	98024297	97988977	ENSG00000065150.18	+	protein_coding	KNOWN	IPO5	29	29	0.230619
chr13	97986950	97987216	97987083	ENSG00000232217.1	-	processed_pseudogene	KNOWN	FTLP8	1	1	0.253455
chr13	98142562	98455176	98298869	ENSG00000152767.15	+	protein_coding	KNOWN	FARP1	42	28	0.300235
chr13	98175785	98177265	98176525	ENSG00000139797.7	-	protein_coding	KNOWN	RNF113B	1	2	0.438642
chr13	98203835	98204192	98204013	ENSG00000222969.1	-	misc_RNA	KNOWN	RN7SKP8	1	1	0.100605
chr13	98208524	98208600	98208562	ENSG00000263399.1	+	miRNA	KNOWN	MIR3170	1	1	0.100605
chr13	98233650	98234700	98234175	ENSG00000269189.1	+	sense_intronic	KNOWN	RP11-573N10.1	1	1	0.595566
chr13	98329655	98333236	98331445	ENSG00000269599.1	-	antisense	KNOWN	RP11-261P24.2	1	2	0.181647
chr13	98435405	98435840	98435622	ENSG00000231194.1	-	antisense	KNOWN	FARP1-AS1	1	2	0.594492
chr13	98445185	98577940	98511562	ENSG00000102572.14	-	protein_coding	KNOWN	STK24	8	11	0.455860
chr13	98553243	98553780	98553511	ENSG00000271437.1	+	processed_pseudogene	KNOWN	RP11-295B17.6	1	1	0.331662
chr13	98577244	98578830	98578037	ENSG00000224418.1	+	antisense	KNOWN	STK24-AS1	1	2	0.614670
chr13	98610292	98610876	98610584	ENSG00000217686.2	-	processed_pseudogene	KNOWN	NUS1P4	1	1	0.298443
chr13	98629686	98629989	98629837	ENSG00000233549.2	-	processed_pseudogene	KNOWN	CYCSP35	1	1	0.298443
chr13	98640814	98641239	98641026	ENSG00000233662.1	-	processed_pseudogene	KNOWN	CALM2P4	1	1	0.244843
chr13	98671980	98672278	98672129	ENSG00000243366.3	+	misc_RNA	KNOWN	RN7SL60P	1	1	0.528784
chr13	98683801	98752654	98718227	ENSG00000088386.15	-	protein_coding	KNOWN	SLC15A1	4	25	0.211671
chr13	98793487	99086625	98940056	ENSG00000088387.17	-	protein_coding	KNOWN	DOCK9	17	57	0.154581
chr13	98832084	98834629	98833356	ENSG00000229918.1	+	antisense	KNOWN	DOCK9-AS1	1	3	0.070187
chr13	98871742	98872005	98871873	ENSG00000275919.1	+	processed_pseudogene	KNOWN	RP11-155N3.4	1	1	0.008663
chr13	98949719	98950447	98950083	ENSG00000231981.3	-	processed_pseudogene	KNOWN	RPL7L1P12	1	1	0.064061
chr13	99025234	99025345	99025289	ENSG00000207298.1	+	snRNA	KNOWN	RNU6-83P	1	1	0.203885
chr13	99087819	99088625	99088222	ENSG00000260992.1	+	antisense	KNOWN	DOCK9-AS2	1	1	0.148260
chr13	99173593	99174490	99174041	ENSG00000230871.1	+	processed_pseudogene	KNOWN	RPS6P23	1	2	0.315463
chr13	99190579	99190991	99190785	ENSG00000234005.3	-	processed_pseudogene	KNOWN	GAPDHP22	1	1	0.260968
chr13	99196377	99200710	99198543	ENSG00000228889.6	-	lincRNA	KNOWN	UBAC2-AS1	2	2	0.260968
chr13	99200774	99386434	99293604	ENSG00000134882.15	+	protein_coding	KNOWN	UBAC2	11	9	0.139588
chr13	99205708	99206006	99205857	ENSG00000201793.1	+	misc_RNA	KNOWN	RN7SKP9	1	1	0.260968
chr13	99215372	99215758	99215565	ENSG00000218502.3	-	processed_pseudogene	KNOWN	H2AFZP3	1	1	0.155070
chr13	99254714	99261744	99258229	ENSG00000125245.12	-	protein_coding	KNOWN	GPR18	4	3	0.202695
chr13	99294530	99307405	99300967	ENSG00000169508.6	-	protein_coding	KNOWN	GPR183	1	2	0.008468
chr13	99356131	99356228	99356179	ENSG00000207719.1	+	miRNA	KNOWN	MIR623	1	1	0.413920
chr13	99372173	99372686	99372429	ENSG00000228808.1	+	processed_pseudogene	KNOWN	HMGB3P4	1	1	-0.113327
chr13	99407781	99409062	99408421	ENSG00000238241.1	-	processed_pseudogene	KNOWN	CCR12P	1	2	0.474565
chr13	99453396	99453469	99453432	ENSG00000266207.1	-	miRNA	NOVEL	AL583784.1	1	1	0.186629
chr13	99486962	99499306	99493134	ENSG00000280734.2	-	processed_transcript	KNOWN	LINC01232	5	4	0.134596
chr13	99498524	99501315	99499919	ENSG00000280710.2	+	lincRNA	KNOWN	RP11-214F16.8	2	3	0.171719
chr13	99499727	99501052	99500389	ENSG00000203441.2	-	antisense	KNOWN	LINC00449	1	2	0.171719
chr13	99501417	99564006	99532711	ENSG00000125304.8	+	protein_coding	KNOWN	TM9SF2	3	17	0.061795
chr13	99577112	99580368	99578740	ENSG00000234168.2	+	lincRNA	KNOWN	LINC01039	1	3	-0.012978
chr13	99582706	99583180	99582943	ENSG00000234239.1	+	processed_pseudogene	KNOWN	CFL1P8	1	1	-0.012978
chr13	99606669	99897134	99751901	ENSG00000125246.15	+	protein_coding	KNOWN	CLYBL	7	9	-0.106395
chr13	99643059	99643149	99643104	ENSG00000263615.1	+	miRNA	KNOWN	MIR4306	1	1	0.077345
chr13	99690081	99690971	99690526	ENSG00000227659.1	-	antisense	KNOWN	CLYBL-AS2	1	2	0.120006
chr13	99726247	99727491	99726869	ENSG00000234303.2	-	antisense	KNOWN	CLYBL-AS1	1	2	-0.052882
chr13	99783857	99783983	99783920	ENSG00000201245.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.078941
chr13	99962964	99971909	99967436	ENSG00000139800.8	-	protein_coding	KNOWN	ZIC5	1	2	-0.004945
chr13	99981772	99986773	99984272	ENSG00000043355.10	+	protein_coding	KNOWN	ZIC2	6	5	-0.299838
chr13	99994899	99997909	99996404	ENSG00000260738.1	-	antisense	KNOWN	LINC00554	1	1	0.135319
chr13	100027769	100028174	100027971	ENSG00000225999.1	-	processed_pseudogene	KNOWN	NDUFA12P1	1	1	0.166470
chr13	100037592	100037850	100037721	ENSG00000280533.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.186309
chr13	100062296	100063601	100062948	ENSG00000236554.1	-	processed_pseudogene	KNOWN	ASNSP3	1	1	0.189090
chr13	100086031	100088848	100087439	ENSG00000274605.1	-	lincRNA	KNOWN	RP11-12G12.7	1	2	-0.075736
chr13	100089015	100530435	100309725	ENSG00000175198.14	+	protein_coding	KNOWN	PCCA	10	24	-0.075667
chr13	100150481	100151092	100150786	ENSG00000228501.2	-	processed_pseudogene	KNOWN	RPL15P18	1	1	0.135581
chr13	100198187	100198469	100198328	ENSG00000270632.1	-	processed_pseudogene	KNOWN	RP11-340C20.3	1	1	0.277942
chr13	100464440	100481157	100472798	ENSG00000234650.5	-	antisense	KNOWN	PCCA-AS1	3	5	0.132040
chr13	100530164	100589528	100559846	ENSG00000134864.10	-	protein_coding	KNOWN	GGACT	6	3	0.192281
chr13	100535741	100587146	100561443	ENSG00000224356.5	-	sense_intronic	KNOWN	RP11-151A6.4	3	4	0.188948
chr13	100537365	100539567	100538466	ENSG00000280169.1	+	antisense	KNOWN	RP11-151A6.6	1	1	0.215506
chr13	100539901	100540248	100540074	ENSG00000234354.3	-	processed_pseudogene	KNOWN	RPS26P47	1	1	0.215506
chr13	100603927	100675093	100639510	ENSG00000125247.15	-	protein_coding	KNOWN	TMTC4	11	19	0.066226
chr13	100623875	100624429	100624152	ENSG00000237082.1	-	processed_pseudogene	KNOWN	COX5BP6	1	2	-0.210804
chr13	100708325	101059286	100883805	ENSG00000233009.1	+	antisense	KNOWN	NALCN-AS1	1	8	-0.314174
chr13	100756551	100757059	100756805	ENSG00000214051.3	-	processed_pseudogene	KNOWN	ARF4P3	1	1	-0.268680
chr13	100940862	100944364	100942613	ENSG00000229599.1	-	lincRNA	KNOWN	LINC00411	1	2	-0.105454
chr13	101053776	101416492	101235134	ENSG00000102452.15	-	protein_coding	KNOWN	NALCN	5	44	-0.266849
chr13	101452593	101720856	101586724	ENSG00000198542.13	+	protein_coding	KNOWN	ITGBL1	7	13	-0.148107
chr13	101710804	102402457	102056630	ENSG00000102466.15	-	protein_coding	KNOWN	FGF14	4	5	-0.461819
chr13	101717564	101723106	101720335	ENSG00000276012.1	+	antisense	KNOWN	RP11-397O8.7	1	3	-0.406814
chr13	101778884	101779048	101778966	ENSG00000201155.1	-	snRNA	KNOWN	RNU1-24P	1	1	-0.691875
chr13	101801878	101802488	101802183	ENSG00000215399.2	+	processed_pseudogene	KNOWN	HMGB3P7	1	1	-0.430429
chr13	101967642	101967746	101967694	ENSG00000265164.1	-	miRNA	KNOWN	MIR2681	1	1	-0.285646
chr13	102002125	102003310	102002717	ENSG00000229975.1	+	processed_pseudogene	KNOWN	LIPT1P1	1	1	-0.466498
chr13	102016953	102017069	102017011	ENSG00000201690.1	-	misc_RNA	KNOWN	RNY1P2	1	1	-0.569592
chr13	102045934	102046004	102045969	ENSG00000264482.1	-	miRNA	KNOWN	MIR4705	1	1	-0.575864
chr13	102263046	102263202	102263124	ENSG00000236860.1	-	processed_pseudogene	KNOWN	RPL39P29	1	1	-0.245509
chr13	102292327	102394519	102343423	ENSG00000243319.7	-	sense_intronic	KNOWN	FGF14-IT1	2	4	-0.564545
chr13	102299790	102300272	102300031	ENSG00000279702.1	-	TEC	KNOWN	RP11-347N5.3	1	1	-0.675835
chr13	102367539	102373666	102370602	ENSG00000234445.1	+	antisense	KNOWN	FGF14-AS1	2	2	-0.590344
chr13	102394630	102395703	102395166	ENSG00000272143.1	+	lincRNA	KNOWN	FGF14-AS2	1	1	-0.539513
chr13	102589372	102589813	102589592	ENSG00000261057.1	-	antisense	KNOWN	LINC00555	1	1	-0.366373
chr13	102593338	102593873	102593605	ENSG00000276957.1	-	lincRNA	KNOWN	RP11-29B2.6	1	1	-0.031391
chr13	102597003	102679958	102638480	ENSG00000134900.11	+	protein_coding	KNOWN	TPP2	8	30	-0.182036
chr13	102685744	102694504	102690124	ENSG00000139780.7	-	protein_coding	KNOWN	METTL21C	1	4	-0.104858
chr13	102729369	102759070	102744219	ENSG00000175820.3	-	protein_coding	KNOWN	CCDC168	1	4	-0.306068
chr13	102742990	102745224	102744107	ENSG00000231633.1	+	antisense	KNOWN	LINC00283	1	2	-0.080845
chr13	102765990	102773811	102769900	ENSG00000151287.16	-	protein_coding	KNOWN	TEX30	7	6	-0.482351
chr13	102784281	102799007	102791644	ENSG00000134901.12	-	protein_coding	KNOWN	KDELC1	4	10	-0.002246
chr13	102799049	102841535	102820292	ENSG00000134897.13	+	protein_coding	KNOWN	BIVM	6	11	0.108103
chr13	102807354	102872398	102839876	ENSG00000270181.1	+	protein_coding	KNOWN	BIVM-ERCC5	1	21	0.044784
chr13	102844844	102876001	102860422	ENSG00000134899.17	+	protein_coding	KNOWN	ERCC5	8	17	-0.063957
chr13	102880099	102896033	102888066	ENSG00000250878.3	+	transcribed_unprocessed_pseudogene	KNOWN	METTL21EP	2	4	-0.338451
chr13	102888858	102889834	102889346	ENSG00000272542.1	+	lincRNA	KNOWN	RP11-255P5.2	1	1	-0.208668
chr13	102903339	102904000	102903669	ENSG00000278445.1	+	lincRNA	KNOWN	RP11-255P5.3	1	1	-0.551387
chr13	103043998	103066846	103055422	ENSG00000125255.6	-	protein_coding	KNOWN	SLC10A2	1	6	-0.424569
chr13	103425200	103427685	103426442	ENSG00000234551.1	+	lincRNA	KNOWN	LINC01309	1	2	-0.374030
chr13	103444620	103444968	103444794	ENSG00000230474.1	-	processed_pseudogene	KNOWN	ATP6V1G1P7	1	1	-0.456751
chr13	104814327	104815069	104814698	ENSG00000225823.1	+	processed_pseudogene	KNOWN	RPL7P45	1	1	-0.415410
chr13	105459055	105505681	105482368	ENSG00000232307.1	-	antisense	KNOWN	DAOA-AS1	1	7	-0.360484
chr13	105459815	105460015	105459915	ENSG00000275968.1	+	misc_RNA	NOVEL	DAOA-AS1_1	1	1	-0.127575
chr13	105462302	105462505	105462403	ENSG00000275502.1	+	misc_RNA	NOVEL	DAOA-AS1_2	1	1	-0.127575
chr13	105465867	105491034	105478450	ENSG00000182346.17	+	protein_coding	KNOWN	DAOA	11	7	-0.264838
chr13	105690429	105702689	105696559	ENSG00000280455.1	+	lincRNA	KNOWN	RP11-252M24.1	1	6	-0.701557
chr13	105704280	105764440	105734360	ENSG00000226620.7	+	processed_transcript	KNOWN	LINC00343	12	5	-0.505481
chr13	105897523	105897643	105897583	ENSG00000252550.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.274330
chr13	106128371	106128488	106128429	ENSG00000222643.1	+	miRNA	NOVEL	AL603632.1	1	1	0.261917
chr13	106155372	106155490	106155431	ENSG00000222682.1	-	rRNA	KNOWN	RNA5SP38	1	1	-0.163509
chr13	106376563	106378217	106377390	ENSG00000233532.5	+	lincRNA	KNOWN	LINC00460	3	3	0.060283
chr13	106425773	106426122	106425947	ENSG00000174418.7	+	processed_pseudogene	KNOWN	RPL35P9	1	1	-0.024150
chr13	106489731	106535114	106512422	ENSG00000125266.6	-	protein_coding	KNOWN	EFNB2	1	5	-0.118382
chr13	106506046	106506713	106506379	ENSG00000274204.1	-	sense_intronic	KNOWN	RP11-272L14.2	1	1	-0.081157
chr13	106541673	106568164	106554918	ENSG00000134884.13	-	protein_coding	KNOWN	ARGLU1	4	5	-0.289454
chr13	106567662	106567799	106567730	ENSG00000278371.2	+	miRNA	NOVEL	AL442127.1	1	1	-0.320134
chr13	106617810	106631359	106624584	ENSG00000272274.1	+	lincRNA	KNOWN	LINC00551	1	4	-0.301165
chr13	106653916	106672163	106663039	ENSG00000230156.2	+	lincRNA	KNOWN	LINC00443	1	3	-0.214450
chr13	106663437	106663847	106663642	ENSG00000227590.2	+	processed_pseudogene	KNOWN	ATP5G1P5	1	1	-0.222323
chr13	106773623	106774279	106773951	ENSG00000278698.1	-	lincRNA	KNOWN	RP11-282A11.3	1	1	-0.485666
chr13	106863816	106864286	106864051	ENSG00000174408.8	-	processed_pseudogene	KNOWN	PPIAP24	1	1	-0.364386
chr13	106903150	106904099	106903624	ENSG00000277863.1	-	lincRNA	KNOWN	RP11-282A11.4	1	1	-0.327722
chr13	106941950	106942561	106942255	ENSG00000279157.1	-	TEC	KNOWN	RP11-282A11.2	1	1	-0.177004
chr13	106974938	106975026	106974982	ENSG00000239050.1	-	miRNA	NOVEL	AL354741.1	1	1	-0.704845
chr13	107121033	107121123	107121078	ENSG00000221316.1	+	miRNA	NOVEL	AL445204.1	1	1	-0.713570
chr13	107163510	107866735	107515122	ENSG00000204442.3	-	protein_coding	KNOWN	FAM155A	1	3	-0.493085
chr13	107320895	107320963	107320929	ENSG00000201847.1	-	snoRNA	NOVEL	SNORD31	1	1	-0.806470
chr13	107465984	107466674	107466329	ENSG00000276740.1	-	sense_intronic	KNOWN	RP11-381O6.1	1	1	-0.526329
chr13	107531171	107531248	107531209	ENSG00000221650.1	-	miRNA	KNOWN	MIR1267	1	1	-0.468309
chr13	107636031	107636116	107636073	ENSG00000221473.2	+	miRNA	NOVEL	AL138710.1	1	1	-0.372676
chr13	107788342	107835451	107811896	ENSG00000227248.1	-	sense_intronic	KNOWN	FAM155A-IT1	1	2	-0.427083
chr13	107870383	107873372	107871877	ENSG00000274718.1	+	lincRNA	KNOWN	RP11-346C4.3	1	1	-0.294425
chr13	108207439	108218368	108212903	ENSG00000174405.13	-	protein_coding	KNOWN	LIG4	5	3	-0.357668
chr13	108218379	108234255	108226317	ENSG00000139826.5	+	protein_coding	KNOWN	ABHD13	1	2	-0.294691
chr13	108251240	108308484	108279862	ENSG00000102524.11	+	protein_coding	KNOWN	TNFSF13B	6	6	-0.742312
chr13	108267320	108267734	108267527	ENSG00000277246.1	+	sense_intronic	KNOWN	RP11-153I24.4	1	1	-0.552425
chr13	108301212	108301331	108301271	ENSG00000223177.1	-	rRNA	KNOWN	RNA5SP39	1	1	-0.957933
chr13	108480226	108481817	108481021	ENSG00000232087.1	+	processed_pseudogene	KNOWN	HCFC2P1	1	1	-0.391885
chr13	108596152	109208007	108902079	ENSG00000041515.15	+	protein_coding	KNOWN	MYO16	7	35	-0.280205
chr13	109101261	109101919	109101590	ENSG00000229938.1	-	antisense	KNOWN	MYO16-AS2	1	2	0.241369
chr13	109163902	109201483	109182692	ENSG00000236242.1	-	antisense	KNOWN	MYO16-AS1	1	4	-0.204836
chr13	109269634	109273838	109271736	ENSG00000275216.1	+	lincRNA	KNOWN	RP11-54H7.4	1	1	0.390365
chr13	109281973	109287733	109284853	ENSG00000223617.1	+	lincRNA	KNOWN	LINC00370	1	2	0.447380
chr13	109310135	109311773	109310954	ENSG00000236053.1	+	lincRNA	KNOWN	LINC01067	1	2	0.278646
chr13	109400696	109401641	109401168	ENSG00000229792.1	+	lincRNA	KNOWN	LINC00399	1	2	0.263677
chr13	109728282	109730007	109729144	ENSG00000234854.1	+	antisense	KNOWN	LINC00676	1	3	-0.291453
chr13	109752698	109786568	109769633	ENSG00000185950.8	-	protein_coding	KNOWN	IRS2	1	2	0.042498
chr13	109785831	109808252	109797041	ENSG00000275741.1	+	antisense	KNOWN	RP11-40E6.1	1	3	0.464800
chr13	109805317	109805868	109805592	ENSG00000275248.1	+	lincRNA	KNOWN	RP11-40E6.2	1	1	0.615554
chr13	109915096	109915420	109915258	ENSG00000201161.1	+	misc_RNA	KNOWN	RN7SKP10	1	1	0.016704
chr13	109984858	109986565	109985711	ENSG00000274331.1	-	lincRNA	KNOWN	RP11-403A3.1	1	1	0.272113
chr13	109988097	110057331	110022714	ENSG00000275830.1	-	lincRNA	KNOWN	RP11-403A3.3	2	3	0.041189
chr13	110031101	110031567	110031334	ENSG00000276269.1	-	lincRNA	KNOWN	RP11-403A3.2	1	1	0.009956
chr13	110053285	110054952	110054118	ENSG00000231428.2	+	lincRNA	KNOWN	LINC00396	1	4	0.010796
chr13	110097851	110098151	110098001	ENSG00000265885.2	-	misc_RNA	KNOWN	RN7SL783P	1	1	0.042804
chr13	110123208	110125234	110124221	ENSG00000279965.1	+	TEC	KNOWN	RP11-472K17.3	1	1	0.441401
chr13	110148963	110307149	110228056	ENSG00000187498.14	-	protein_coding	KNOWN	COL4A1	5	52	0.415334
chr13	110265251	110266113	110265682	ENSG00000279237.1	-	TEC	KNOWN	RP11-212E4.1	1	1	0.484731
chr13	110305812	110513027	110409419	ENSG00000134871.17	+	protein_coding	KNOWN	COL4A2	10	48	0.543941
chr13	110340958	110341029	110340993	ENSG00000276765.1	+	miRNA	KNOWN	MIR8073	1	1	0.391552
chr13	110429026	110429342	110429184	ENSG00000275611.1	+	sense_intronic	KNOWN	RP11-291I6.2	1	1	0.583295
chr13	110456396	110463287	110459841	ENSG00000224821.5	-	antisense	KNOWN	COL4A2-AS2	1	5	0.584197
chr13	110502575	110508179	110505377	ENSG00000232814.2	-	antisense	KNOWN	COL4A2-AS1	1	3	0.765432
chr13	110523066	110561733	110542399	ENSG00000139832.4	-	protein_coding	KNOWN	RAB20	1	2	0.629269
chr13	110613082	110616353	110614717	ENSG00000275880.1	-	antisense	KNOWN	RP11-90L1.8	1	1	0.387120
chr13	110615460	110639993	110627726	ENSG00000213995.11	+	protein_coding	KNOWN	CARKD	3	10	0.600579
chr13	110641412	110713603	110677507	ENSG00000134905.16	-	protein_coding	KNOWN	CARS2	33	15	0.481057
chr13	110712736	110723339	110718037	ENSG00000153487.12	+	protein_coding	KNOWN	ING1	5	2	0.318763
chr13	110762674	110763133	110762903	ENSG00000225239.1	-	processed_pseudogene	KNOWN	RPL21P107	1	1	0.051350
chr13	110809676	110813084	110811380	ENSG00000259831.1	-	lincRNA	KNOWN	LINC00567	1	1	0.289873
chr13	110863987	110870251	110867119	ENSG00000255874.2	-	lincRNA	KNOWN	LINC00346	1	1	0.219370
chr13	110878540	110915069	110896804	ENSG00000088448.14	-	protein_coding	KNOWN	ANKRD10	11	6	0.380746
chr13	110894639	110899172	110896905	ENSG00000229152.2	-	sense_intronic	KNOWN	ANKRD10-IT1	1	2	0.275299
chr13	110916004	110917827	110916915	ENSG00000277767.1	+	lincRNA	KNOWN	RP11-365P13.5	1	1	0.247270
chr13	110936759	110939784	110938271	ENSG00000227105.1	+	processed_pseudogene	KNOWN	PARP1P1	1	1	0.216918
chr13	110952722	110952811	110952766	ENSG00000275989.1	-	unprocessed_pseudogene	KNOWN	RP11-365P13.6	1	1	0.538944
chr13	110983307	110990564	110986935	ENSG00000225760.1	+	lincRNA	KNOWN	LINC00431	1	2	0.217037
chr13	111095838	111103097	111099467	ENSG00000225870.1	+	lincRNA	KNOWN	LINC00368	1	3	-0.233408
chr13	111113812	111115678	111114745	ENSG00000235875.3	-	antisense	KNOWN	ARHGEF7-AS2	1	2	0.024878
chr13	111114559	111305737	111210148	ENSG00000102606.17	+	protein_coding	KNOWN	ARHGEF7	19	21	0.146875
chr13	111122652	111144264	111133458	ENSG00000233644.1	+	sense_intronic	KNOWN	ARHGEF7-IT1	1	2	0.084017
chr13	111144305	111144733	111144519	ENSG00000227352.1	-	antisense	KNOWN	ARHGEF7-AS1	1	2	0.114476
chr13	111182111	111182692	111182401	ENSG00000274614.1	-	unprocessed_pseudogene	KNOWN	RP11-17E4.1	1	1	0.346565
chr13	111316184	111344249	111330216	ENSG00000153495.10	+	protein_coding	KNOWN	TEX29	2	7	0.408902
chr13	111588201	111672608	111630404	ENSG00000204398.5	+	lincRNA	KNOWN	RP11-65D24.2	2	4	-0.045761
chr13	111596009	111642079	111619044	ENSG00000215881.3	+	lincRNA	KNOWN	RP11-65D24.1	1	2	-0.166888
chr13	111899985	111901176	111900580	ENSG00000226903.1	+	lincRNA	KNOWN	LINC00354	2	2	0.015030
chr13	112052078	112052138	112052108	ENSG00000200072.1	+	snoRNA	NOVEL	SNORD44	1	1	-0.147584
chr13	112067647	112070488	112069067	ENSG00000182968.4	+	protein_coding	KNOWN	SOX1	1	1	-0.023590
chr13	112083549	112085471	112084510	ENSG00000260385.1	+	lincRNA	KNOWN	RP11-450H6.3	1	1	0.572797
chr13	112106095	112106882	112106488	ENSG00000229520.1	-	lincRNA	KNOWN	LINC00404	1	2	0.032491
chr13	112107119	112108015	112107567	ENSG00000224243.1	+	lincRNA	KNOWN	LINC00403	1	2	0.032491
chr13	112197350	112201000	112199175	ENSG00000260102.1	+	lincRNA	KNOWN	LINC01070	1	2	0.120703
chr13	112313467	112321758	112317612	ENSG00000260343.1	+	lincRNA	KNOWN	LINC01043	1	2	0.150173
chr13	112322567	112331225	112326896	ENSG00000223626.1	-	lincRNA	KNOWN	LINC01044	1	3	0.164429
chr13	112376319	112434689	112405504	ENSG00000153498.11	+	protein_coding	KNOWN	SPACA7	4	7	-0.118107
chr13	112485005	112588167	112536586	ENSG00000126216.12	-	protein_coding	KNOWN	TUBGCP3	8	22	0.103063
chr13	112602828	112606417	112604622	ENSG00000277159.1	-	lincRNA	KNOWN	RP11-88E10.4	1	1	-0.149016
chr13	112647044	112684497	112665770	ENSG00000197595.4	+	lincRNA	KNOWN	ATP11AUN	1	3	0.206259
chr13	112686769	112689815	112688292	ENSG00000274922.1	-	lincRNA	KNOWN	RP11-88E10.5	1	1	0.192596
chr13	112690329	112887168	112788748	ENSG00000068650.18	+	protein_coding	KNOWN	ATP11A	17	30	0.325527
chr13	112717845	112717914	112717879	ENSG00000264726.1	-	miRNA	NOVEL	AL162711.1	1	1	0.140201
chr13	112745449	112754693	112750071	ENSG00000232684.1	-	antisense	KNOWN	ATP11A-AS1	1	2	0.394432
chr13	112811566	112812158	112811862	ENSG00000277545.1	+	sense_intronic	KNOWN	RP11-73M11.3	1	1	0.115971
chr13	112894378	113099739	112997058	ENSG00000126217.20	+	protein_coding	KNOWN	MCF2L	32	30	0.476631
chr13	112964835	112966131	112965483	ENSG00000267868.1	-	lincRNA	KNOWN	RP11-120K24.3	1	1	0.285673
chr13	112967484	112968824	112968154	ENSG00000235280.2	-	antisense	KNOWN	MCF2L-AS1	1	2	0.285673
chr13	113008778	113009424	113009101	ENSG00000269356.1	+	sense_intronic	KNOWN	RP11-120K24.4	1	1	0.623774
chr13	113009671	113010319	113009995	ENSG00000269376.1	+	sense_intronic	KNOWN	RP11-120K24.5	1	1	0.656946
chr13	113105788	113120681	113113234	ENSG00000057593.13	+	protein_coding	KNOWN	F7	6	9	0.682389
chr13	113122814	113149529	113136171	ENSG00000126218.11	+	protein_coding	KNOWN	F10	7	8	0.606008
chr13	113128155	113128880	113128517	ENSG00000231882.1	-	antisense	KNOWN	F10-AS1	1	2	0.671149
chr13	113130416	113132054	113131235	ENSG00000230371.1	+	processed_pseudogene	KNOWN	KARSP2	1	1	0.582043
chr13	113158654	113172383	113165518	ENSG00000126231.13	+	protein_coding	KNOWN	PROZ	3	9	0.619917
chr13	113165002	113165183	113165092	ENSG00000269125.1	-	antisense	KNOWN	RP11-98F14.11	1	1	0.631511
chr13	113177539	113208715	113193127	ENSG00000126226.21	-	protein_coding	KNOWN	PCID2	16	15	0.623724
chr13	113208193	113267108	113237650	ENSG00000139842.14	+	protein_coding	KNOWN	CUL4A	12	20	0.476803
chr13	113262834	113262913	113262873	ENSG00000278639.1	+	miRNA	NOVEL	AL136221.3	1	1	0.200516
chr13	113262920	113262999	113262959	ENSG00000277942.1	+	miRNA	KNOWN	MIR8075	1	1	0.200516
chr13	113263006	113263085	113263045	ENSG00000275403.1	+	miRNA	NOVEL	AL136221.2	1	1	0.200516
chr13	113263092	113263171	113263131	ENSG00000275261.1	+	miRNA	NOVEL	AL136221.1	1	1	0.200516
chr13	113276616	113277734	113277175	ENSG00000232662.2	+	processed_pseudogene	KNOWN	LDHBP1	1	1	0.511076
chr13	113297241	113323672	113310456	ENSG00000185896.10	+	protein_coding	KNOWN	LAMP1	3	9	0.605467
chr13	113324164	113364148	113344156	ENSG00000139835.13	-	protein_coding	KNOWN	GRTP1	5	8	0.621954
chr13	113339450	113339958	113339704	ENSG00000276434.1	-	sense_intronic	KNOWN	RP11-391H12.8	1	1	0.690629
chr13	113351673	113361868	113356770	ENSG00000225083.1	+	antisense	KNOWN	GRTP1-AS1	2	2	0.528432
chr13	113399610	113453524	113426567	ENSG00000153531.13	-	protein_coding	KNOWN	ADPRHL1	4	8	0.947034
chr13	113455819	113490952	113473385	ENSG00000150401.14	-	protein_coding	KNOWN	DCUN1D2	11	8	0.571981
chr13	113468901	113476135	113472518	ENSG00000233613.5	+	antisense	KNOWN	DCUN1D2-AS	2	2	0.543473
chr13	113478915	113479078	113478996	ENSG00000202347.1	-	snRNA	KNOWN	RNU1-16P	1	1	0.522342
chr13	113490995	113554590	113522792	ENSG00000150403.17	+	protein_coding	KNOWN	TMCO3	11	13	0.551332
chr13	113511747	113514473	113513110	ENSG00000276916.1	+	sense_intronic	KNOWN	RP11-230F18.6	1	2	0.582832
chr13	113527260	113530621	113528940	ENSG00000276248.1	+	sense_intronic	KNOWN	RP11-230F18.5	1	1	0.611477
chr13	113584721	113641470	113613095	ENSG00000198176.12	+	protein_coding	KNOWN	TFDP1	8	12	0.811827
chr13	113648804	113658186	113653495	ENSG00000186009.4	-	protein_coding	KNOWN	ATP4B	1	7	0.678555
chr13	113667155	113737735	113702445	ENSG00000185974.6	+	protein_coding	KNOWN	GRK1	3	7	0.372881
chr13	113748511	113751089	113749800	ENSG00000279770.1	-	TEC	KNOWN	LINC00552	1	1	0.935115
chr13	113759240	113816995	113788117	ENSG00000184497.12	+	protein_coding	KNOWN	TMEM255B	6	9	0.803503
chr13	113815630	113845744	113830687	ENSG00000233695.2	+	antisense	KNOWN	GAS6-AS1	2	5	1.268597
chr13	113820549	113864067	113842308	ENSG00000183087.14	-	protein_coding	KNOWN	GAS6	5	15	1.234126
chr13	113864168	113866833	113865500	ENSG00000272695.1	+	lincRNA	KNOWN	GAS6-AS2	1	2	1.197701
chr13	113877608	113879376	113878492	ENSG00000237699.1	+	lincRNA	KNOWN	RP11-199F6.4	1	2	0.633961
chr13	113878489	113883651	113881070	ENSG00000226921.6	-	lincRNA	KNOWN	LINC00454	7	4	0.633961
chr13	113883667	113885335	113884501	ENSG00000274766.1	+	lincRNA	KNOWN	LINC00453	1	2	0.633961
chr13	113888306	113923512	113905909	ENSG00000229373.8	+	lincRNA	KNOWN	LINC00452	2	8	0.761244
chr13	113926514	113928844	113927679	ENSG00000260910.1	-	lincRNA	KNOWN	LINC00565	1	1	0.706535
chr13	113977783	114132611	114055197	ENSG00000185989.10	-	protein_coding	KNOWN	RASA3	2	24	1.045242
chr13	114107569	114108820	114108194	ENSG00000232487.1	-	sense_intronic	KNOWN	RASA3-IT1	1	2	0.659467
chr13	114234887	114272723	114253805	ENSG00000130177.14	+	protein_coding	KNOWN	CDC16	11	19	0.642122
chr13	114244505	114244561	114244533	ENSG00000264539.1	+	miRNA	KNOWN	MIR548AR	1	1	0.686114
chr13	114273828	114273908	114273868	ENSG00000265450.1	+	miRNA	KNOWN	MIR4502	1	1	0.256846
chr13	114281584	114305817	114293700	ENSG00000169062.14	+	protein_coding	KNOWN	UPF3A	12	10	0.550488
chr13	114306646	114307066	114306856	ENSG00000226158.1	+	processed_pseudogene	KNOWN	CLCP2	1	1	0.706702
chr13	114314513	114327328	114320920	ENSG00000198824.5	+	protein_coding	KNOWN	CHAMP1	3	3	0.422332
chr13	114329559	114333948	114331753	ENSG00000229723.1	-	antisense	KNOWN	LINC01054	1	3	0.466877
chr13	114346167	114346637	114346402	ENSG00000260615.1	+	processed_pseudogene	KNOWN	RPL23AP97	1	1	0.471840
chr14	18333726	18341859	18337792	ENSG00000215398.11	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-754I20.1	2	5	-0.305156
chr14	18343038	18343144	18343091	ENSG00000206906.1	+	snRNA	KNOWN	RNU6-458P	1	1	-0.305156
chr14	18395626	18412264	18403945	ENSG00000257171.2	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-754I20.3	1	3	-0.689102
chr14	18418775	18419273	18419024	ENSG00000257356.2	+	processed_pseudogene	KNOWN	BNIP3P6	1	1	-0.231797
chr14	18477371	18477453	18477412	ENSG00000238442.1	+	miRNA	NOVEL	CR383657.1	1	1	-0.211876
chr14	18555677	18596310	18575993	ENSG00000257959.1	-	antisense	KNOWN	RP11-536C10.4	1	2	-0.373458
chr14	18560047	18560191	18560119	ENSG00000257721.1	+	processed_pseudogene	KNOWN	RP11-536C10.2	1	1	-0.546910
chr14	18562928	18568790	18565859	ENSG00000258367.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-536C10.3	1	4	-0.546910
chr14	18588274	18588315	18588294	ENSG00000257825.1	-	transcribed_processed_pseudogene	KNOWN	RP11-536C10.5	1	1	-0.304767
chr14	18601045	18602129	18601587	ENSG00000257115.1	+	protein_coding	KNOWN	OR11H12	1	1	-0.197515
chr14	18614388	18614561	18614474	ENSG00000257672.2	+	processed_pseudogene	KNOWN	RP11-536C10.17	1	1	-0.336629
chr14	18623852	18626787	18625319	ENSG00000258233.1	-	processed_pseudogene	KNOWN	ARHGAP42P5	1	1	-0.336629
chr14	18630318	18633634	18631976	ENSG00000257504.1	-	lincRNA	KNOWN	RP11-536C10.7	1	3	-0.268477
chr14	18631388	18650966	18641177	ENSG00000257644.1	+	unprocessed_pseudogene	KNOWN	RP11-536C10.13	1	3	-0.267963
chr14	18634955	18637208	18636081	ENSG00000257175.2	-	processed_pseudogene	KNOWN	RP11-536C10.12	1	1	-0.268477
chr14	18636043	18637421	18636732	ENSG00000258364.1	+	lincRNA	KNOWN	RP11-536C10.16	1	2	-0.268477
chr14	18645044	18646221	18645632	ENSG00000257731.2	-	processed_pseudogene	KNOWN	RP11-536C10.11	1	1	-0.268477
chr14	18645991	18646503	18646247	ENSG00000258076.1	+	processed_pseudogene	KNOWN	RP11-536C10.14	1	1	-0.268477
chr14	18667249	18667370	18667309	ENSG00000257558.2	+	processed_pseudogene	KNOWN	RP11-536C10.15	1	1	-0.258066
chr14	18692032	18692408	18692220	ENSG00000239200.1	+	processed_pseudogene	KNOWN	RP11-536C10.1	1	1	-0.496195
chr14	18698639	18699978	18699308	ENSG00000257635.2	-	transcribed_processed_pseudogene	KNOWN	RP11-536C10.10	1	1	-0.496195
chr14	18702281	18702463	18702372	ENSG00000257224.1	-	transcribed_processed_pseudogene	KNOWN	RP11-536C10.9	1	1	-0.496195
chr14	18709478	18712643	18711060	ENSG00000277529.1	-	transcribed_unprocessed_pseudogene	KNOWN	NF1P10	2	5	0.075165
chr14	18889084	18890424	18889754	ENSG00000277367.1	-	processed_pseudogene	KNOWN	RP11-536C10.26	1	1	-0.099667
chr14	18899942	18909673	18904807	ENSG00000278143.1	-	unprocessed_pseudogene	KNOWN	NF1P7	1	11	-0.005305
chr14	18912805	18916642	18914723	ENSG00000257853.2	-	transcribed_unprocessed_pseudogene	KNOWN	MED15P1	2	8	0.409732
chr14	18920109	18934078	18927093	ENSG00000257891.1	+	lincRNA	KNOWN	CTD-2311B13.1	2	3	0.239515
chr14	18944199	18945139	18944669	ENSG00000258265.1	+	lincRNA	KNOWN	CTD-2311B13.2	1	2	-0.173197
chr14	18967434	18999012	18983223	ENSG00000222036.7	+	protein_coding	KNOWN	POTEM	3	12	-0.340480
chr14	18977180	18980742	18978961	ENSG00000275563.1	-	antisense	KNOWN	CTD-2311B13.5	1	2	-0.226959
chr14	18978847	18978953	18978900	ENSG00000212612.1	+	snRNA	KNOWN	RNU6-1239P	1	1	-0.226959
chr14	19024090	19055551	19039820	ENSG00000258314.3	+	lincRNA	KNOWN	CTD-2314B22.1	2	3	-0.132355
chr14	19026521	19028189	19027355	ENSG00000274369.1	-	processed_pseudogene	KNOWN	GRAMD4P4	1	2	-0.192181
chr14	19062316	19115270	19088793	ENSG00000225210.9	+	transcribed_processed_pseudogene	KNOWN	DUXAP9	8	8	-0.201962
chr14	19127736	19175530	19151633	ENSG00000277128.1	-	lincRNA	KNOWN	RP11-146E13.4	1	2	-0.440435
chr14	19131842	19132890	19132366	ENSG00000278594.1	-	processed_pseudogene	KNOWN	RP11-146E13.5	1	1	-0.444675
chr14	19154134	19155089	19154611	ENSG00000277710.1	+	processed_pseudogene	KNOWN	CTD-2314B22.2	1	2	-0.607499
chr14	19180291	19181269	19180780	ENSG00000196143.4	+	processed_pseudogene	KNOWN	OR11H13P	1	1	0.087223
chr14	19199763	19200279	19200021	ENSG00000271632.1	-	processed_pseudogene	KNOWN	RP11-496I2.7	1	1	-0.385442
chr14	19220796	19220912	19220854	ENSG00000277252.1	-	unprocessed_pseudogene	KNOWN	RP11-496I2.8	1	1	0.126262
chr14	19228924	19244931	19236927	ENSG00000258781.2	-	unprocessed_pseudogene	KNOWN	RP11-496I2.4	1	2	0.073641
chr14	19244962	19247673	19246317	ENSG00000257310.1	+	lincRNA	KNOWN	RP11-496I2.2	1	1	0.069853
chr14	19267115	19268164	19267639	ENSG00000277156.1	+	processed_pseudogene	KNOWN	RP11-496I2.5	1	1	-0.461607
chr14	19284653	19337730	19311191	ENSG00000244306.9	-	transcribed_processed_pseudogene	KNOWN	LINC01296	9	6	-0.241371
chr14	19300177	19302924	19301550	ENSG00000279508.1	-	protein_coding	KNOWN	AL589743.1	1	1	-0.445858
chr14	19301704	19316914	19309309	ENSG00000228294.6	+	transcribed_unprocessed_pseudogene	KNOWN	BMS1P17	3	3	-0.163663
chr14	19344578	19384587	19364582	ENSG00000274827.4	-	lincRNA	KNOWN	LINC01297	2	4	-0.152000
chr14	19371822	19373490	19372656	ENSG00000278301.1	+	processed_pseudogene	KNOWN	GRAMD4P3	1	1	-0.502955
chr14	19402486	19434341	19418413	ENSG00000187537.13	-	protein_coding	KNOWN	POTEG	3	12	-0.167710
chr14	19420975	19425017	19422996	ENSG00000276888.1	+	antisense	KNOWN	RP11-244H18.1	1	2	-0.316288
chr14	19422815	19422921	19422868	ENSG00000212516.1	-	snRNA	KNOWN	RNU6-1268P	1	1	-0.316288
chr14	19485336	19489148	19487242	ENSG00000257162.6	+	transcribed_processed_pseudogene	KNOWN	MED15P6	2	8	-0.279666
chr14	19492281	19501740	19497010	ENSG00000258027.2	+	unprocessed_pseudogene	KNOWN	NF1P4	1	11	0.112951
chr14	19499737	19677923	19588830	ENSG00000273639.4	+	processed_transcript	KNOWN	RP11-597A11.11	2	7	-0.081552
chr14	19511244	19511712	19511478	ENSG00000274649.1	+	processed_pseudogene	KNOWN	CTD-2311B13.10	1	1	0.294485
chr14	19612191	19619490	19615840	ENSG00000278184.1	+	unprocessed_pseudogene	KNOWN	NF1P11	1	8	-0.653825
chr14	19629006	19630340	19629673	ENSG00000257432.1	+	processed_pseudogene	KNOWN	RP11-244H18.4	1	1	-0.535315
chr14	19637225	19641306	19639265	ENSG00000273558.1	+	lincRNA	KNOWN	RP11-244H18.3	1	3	-0.190210
chr14	19653623	19653742	19653682	ENSG00000258324.2	-	processed_pseudogene	KNOWN	RP11-536C10.22	1	1	-0.141322
chr14	19664098	19683677	19673887	ENSG00000257493.1	-	unprocessed_pseudogene	KNOWN	RP11-536C10.20	1	3	-0.207738
chr14	19668542	19669056	19668799	ENSG00000257751.2	-	processed_pseudogene	KNOWN	RP11-536C10.21	1	1	-0.141322
chr14	19668829	19670003	19669416	ENSG00000257846.2	+	processed_pseudogene	KNOWN	RP11-597A11.3	1	1	-0.141646
chr14	19677644	19679016	19678330	ENSG00000259069.1	-	lincRNA	KNOWN	RP11-597A11.6	1	2	-0.236391
chr14	19677837	19680104	19678970	ENSG00000257884.2	+	transcribed_processed_pseudogene	KNOWN	RP11-597A11.4	1	1	-0.236391
chr14	19681420	19684739	19683079	ENSG00000257395.1	+	lincRNA	KNOWN	RP11-597A11.2	1	3	-0.236391
chr14	19688261	19691194	19689727	ENSG00000258080.1	+	processed_pseudogene	KNOWN	ARHGAP42P4	1	1	-0.376220
chr14	19700479	19700650	19700564	ENSG00000257142.1	-	unprocessed_pseudogene	KNOWN	RP11-536C10.19	1	1	-0.579586
chr14	19712936	19713920	19713428	ENSG00000258453.2	-	protein_coding	KNOWN	OR11H2	1	1	-0.299091
chr14	19719015	19828372	19773693	ENSG00000176294.4	+	protein_coding	KNOWN	OR4N2	3	5	-0.371787
chr14	19733355	19734302	19733828	ENSG00000258438.3	-	unprocessed_pseudogene	KNOWN	OR11K2P	1	1	-0.365215
chr14	19747428	19748369	19747898	ENSG00000182652.1	+	protein_coding	KNOWN	OR4Q3	1	1	-0.365215
chr14	19759868	19760774	19760321	ENSG00000176312.4	+	unprocessed_pseudogene	KNOWN	OR4H12P	1	1	-0.375401
chr14	19780242	19781357	19780799	ENSG00000176299.4	+	protein_coding	KNOWN	OR4M1	1	1	-0.430235
chr14	19796345	19797260	19796802	ENSG00000258564.1	+	unprocessed_pseudogene	KNOWN	OR4N1P	1	1	-0.540637
chr14	19847367	19848263	19847815	ENSG00000228304.1	+	unprocessed_pseudogene	KNOWN	OR4K6P	1	1	-0.023485
chr14	19868242	19869143	19868692	ENSG00000176290.7	-	unprocessed_pseudogene	KNOWN	OR4K3	1	1	-0.497297
chr14	19876232	19877309	19876770	ENSG00000165762.2	+	protein_coding	KNOWN	OR4K2	1	1	-0.520083
chr14	19905917	19906600	19906258	ENSG00000258541.1	+	unprocessed_pseudogene	KNOWN	OR4K4P	1	1	-0.527186
chr14	19908096	19908649	19908372	ENSG00000259016.1	-	processed_pseudogene	KNOWN	CTD-2335L22.6	1	1	-0.527186
chr14	19920582	19921659	19921120	ENSG00000176281.4	+	protein_coding	KNOWN	OR4K5	1	1	-0.236062
chr14	19935608	19936683	19936145	ENSG00000155249.4	+	protein_coding	KNOWN	OR4K1	1	1	-0.346892
chr14	19956600	19957568	19957084	ENSG00000258822.1	+	unprocessed_pseudogene	KNOWN	OR4K16P	1	1	-0.622387
chr14	19975444	19976659	19976051	ENSG00000169488.5	+	protein_coding	KNOWN	OR4K15	1	1	-0.351997
chr14	20002163	20003163	20002663	ENSG00000196383.5	+	polymorphic_pseudogene	KNOWN	OR4Q2	2	3	-0.144708
chr14	20014260	20015193	20014726	ENSG00000169484.2	-	protein_coding	KNOWN	OR4K14	1	1	-0.401048
chr14	20033661	20033764	20033712	ENSG00000265199.1	+	miRNA	NOVEL	AL359218.1	1	1	-0.212402
chr14	20033844	20034760	20034302	ENSG00000176253.2	-	protein_coding	KNOWN	OR4K13	1	1	-0.212402
chr14	20043916	20044827	20044371	ENSG00000258899.1	+	unprocessed_pseudogene	KNOWN	OR4U1P	1	1	-0.212402
chr14	20060045	20060983	20060514	ENSG00000176246.1	+	protein_coding	KNOWN	OR4L1	1	1	-0.429245
chr14	20090130	20090227	20090178	ENSG00000252999.1	+	rRNA	KNOWN	RNA5SP380	1	1	-0.528721
chr14	20093353	20094263	20093808	ENSG00000258641.1	+	unprocessed_pseudogene	KNOWN	OR4T1P	1	1	-0.528721
chr14	20117407	20118438	20117922	ENSG00000176230.4	+	protein_coding	KNOWN	OR4K17	1	1	-0.002336
chr14	20143736	20144662	20144199	ENSG00000184394.1	+	protein_coding	KNOWN	OR4N5	1	1	-0.593135
chr14	20149232	20149745	20149488	ENSG00000259074.1	+	unitary_pseudogene	KNOWN	PSMB7P1	1	1	-0.593135
chr14	20173632	20173813	20173722	ENSG00000259095.1	-	processed_pseudogene	KNOWN	GTF2IP22	1	1	-0.251661
chr14	20179189	20180156	20179672	ENSG00000258468.1	+	unprocessed_pseudogene	KNOWN	OR11G1P	1	1	-0.251661
chr14	20197336	20198446	20197891	ENSG00000196832.3	+	protein_coding	KNOWN	OR11G2	1	1	-0.320702
chr14	20209240	20210210	20209725	ENSG00000258625.1	+	unprocessed_pseudogene	KNOWN	OR11H5P	1	1	-0.298590
chr14	20217154	20217239	20217196	ENSG00000266336.1	-	miRNA	NOVEL	AL356019.1	1	1	-0.219048
chr14	20223632	20224805	20224218	ENSG00000176219.2	+	protein_coding	KNOWN	OR11H6	1	1	-0.219048
chr14	20229402	20230341	20229871	ENSG00000258806.1	+	polymorphic_pseudogene	KNOWN	OR11H7	1	1	-0.251424
chr14	20242739	20243820	20243279	ENSG00000176198.2	+	protein_coding	KNOWN	OR11H4	1	1	-0.307939
chr14	20256558	20305994	20281276	ENSG00000136319.11	-	protein_coding	KNOWN	TTC5	7	10	-0.040502
chr14	20260480	20264308	20262394	ENSG00000258768.2	-	lincRNA	KNOWN	CTD-2292M16.8	1	1	-0.115813
chr14	20305730	20306811	20306270	ENSG00000258459.1	+	antisense	KNOWN	CTD-2292M16.7	1	2	-0.000126
chr14	20311368	20333312	20322340	ENSG00000100814.17	-	protein_coding	KNOWN	CCNB1IP1	16	8	0.225790
chr14	20323179	20323326	20323252	ENSG00000222489.1	-	snoRNA	KNOWN	SNORA79	1	1	0.230890
chr14	20323246	20323349	20323297	ENSG00000281684.1	-	miRNA	NOVEL	AL355075.1	1	1	0.230890
chr14	20326450	20326526	20326488	ENSG00000238344.1	-	snoRNA	KNOWN	SNORD126	1	1	0.230890
chr14	20343048	20343685	20343366	ENSG00000259001.3	-	antisense	KNOWN	RPPH1	1	1	0.197109
chr14	20343075	20343407	20343241	ENSG00000277209.1	-	ribozyme	KNOWN	RPPH1	1	1	0.197109
chr14	20343582	20357905	20350743	ENSG00000129484.13	+	protein_coding	KNOWN	PARP2	11	16	0.376194
chr14	20344233	20346888	20345560	ENSG00000254846.1	-	antisense	KNOWN	RP11-203M5.2	1	2	0.197109
chr14	20365667	20413429	20389548	ENSG00000129566.12	-	protein_coding	KNOWN	TEP1	11	55	0.747979
chr14	20414987	20415098	20415042	ENSG00000200225.1	+	rRNA	KNOWN	RNA5SP382	1	1	0.547293
chr14	20428811	20435642	20432226	ENSG00000185271.6	-	protein_coding	KNOWN	KLHL33	1	4	0.666529
chr14	20437982	20441268	20439625	ENSG00000259162.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-203M5.6	2	10	0.691631
chr14	20446411	20455105	20450758	ENSG00000092094.10	-	protein_coding	KNOWN	OSGEP	12	11	0.593086
chr14	20451305	20451918	20451611	ENSG00000258515.1	+	antisense	KNOWN	RP11-203M5.7	1	2	0.523838
chr14	20455191	20457772	20456481	ENSG00000100823.11	+	protein_coding	KNOWN	APEX1	20	5	0.523838
chr14	20457719	20461612	20459665	ENSG00000165782.10	-	protein_coding	KNOWN	TMEM55B	7	7	0.523838
chr14	20468954	20477094	20473024	ENSG00000198805.11	+	protein_coding	KNOWN	PNP	8	6	0.332955
chr14	20474789	20477089	20475939	ENSG00000258908.1	-	lincRNA	KNOWN	RP11-203M5.8	1	2	0.304840
chr14	20505537	20511169	20508353	ENSG00000182545.6	+	protein_coding	KNOWN	RNASE10	2	2	0.260266
chr14	20524287	20525422	20524854	ENSG00000258456.2	-	processed_pseudogene	KNOWN	PTCD2P1	1	1	0.473862
chr14	20528115	20528959	20528537	ENSG00000258863.1	-	processed_pseudogene	KNOWN	SETP1	1	1	0.473862
chr14	20556093	20560931	20558512	ENSG00000188655.10	-	protein_coding	KNOWN	RNASE9	11	5	-0.177195
chr14	20582892	20609795	20596343	ENSG00000259060.7	-	protein_coding	KNOWN	RP11-14J7.7	2	3	0.178048
chr14	20583559	20609884	20596721	ENSG00000173464.14	-	protein_coding	KNOWN	RNASE11	11	4	0.178683
chr14	20587644	20607137	20597390	ENSG00000258573.5	+	antisense	KNOWN	RP11-14J7.6	5	4	0.182705
chr14	20590193	20590823	20590508	ENSG00000258436.1	-	protein_coding	KNOWN	RNASE12	1	1	0.186629
chr14	20616644	20616991	20616817	ENSG00000239327.1	-	processed_pseudogene	KNOWN	RP11-14J7.1	1	1	0.626141
chr14	20640696	20641691	20641193	ENSG00000181803.3	-	protein_coding	KNOWN	OR6S1	1	1	0.162039
chr14	20679411	20679512	20679461	ENSG00000199461.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.301445
chr14	20684100	20701215	20692657	ENSG00000258818.3	+	protein_coding	KNOWN	RNASE4	3	2	0.390695
chr14	20684177	20698971	20691574	ENSG00000214274.9	+	protein_coding	KNOWN	ANG	3	2	0.384040
chr14	20684587	20700576	20692581	ENSG00000259171.1	+	protein_coding	KNOWN	RP11-903H12.5	1	3	0.391538
chr14	20693480	20707120	20700300	ENSG00000258451.1	-	antisense	KNOWN	RP11-903H12.3	1	4	0.437636
chr14	20720742	20723127	20721934	ENSG00000259144.2	-	processed_pseudogene	KNOWN	RANBP20P	1	2	0.174063
chr14	20731699	20748380	20740039	ENSG00000181562.3	+	protein_coding	KNOWN	EDDM3A	2	3	0.084297
chr14	20734578	20735011	20734794	ENSG00000258963.1	+	unprocessed_pseudogene	KNOWN	EDDM3DP	1	1	0.084297
chr14	20768427	20770948	20769687	ENSG00000181552.3	+	protein_coding	KNOWN	EDDM3B	1	2	0.145575
chr14	20781051	20782467	20781759	ENSG00000169413.2	+	protein_coding	KNOWN	RNASE6	1	2	0.182662
chr14	20783888	20784293	20784090	ENSG00000258810.1	+	antisense	KNOWN	RP11-219E7.1	1	2	0.182662
chr14	20801228	20803278	20802253	ENSG00000129538.13	-	protein_coding	KNOWN	RNASE1	5	3	0.084130
chr14	20870278	20873592	20871935	ENSG00000259130.1	-	lincRNA	KNOWN	RP11-219E7.3	2	3	0.247270
chr14	20874305	20875768	20875036	ENSG00000258642.1	-	antisense	KNOWN	RP11-219E7.2	1	2	0.247270
chr14	20891399	20892348	20891873	ENSG00000169397.3	+	protein_coding	KNOWN	RNASE3	1	2	0.137554
chr14	20897985	20936255	20917120	ENSG00000258918.1	-	lincRNA	KNOWN	RP11-219E7.4	1	2	0.098909
chr14	20916766	20928580	20922673	ENSG00000258772.1	-	lincRNA	KNOWN	RP11-84C10.3	1	2	0.115579
chr14	20919361	20920299	20919830	ENSG00000136315.4	+	lincRNA	KNOWN	RP11-84C10.2	1	2	0.115579
chr14	20955452	20956436	20955944	ENSG00000169385.2	+	protein_coding	KNOWN	RNASE2	1	2	0.230154
chr14	20963579	20963867	20963723	ENSG00000243817.3	+	misc_RNA	KNOWN	RN7SL189P	1	1	0.230154
chr14	20983155	20985066	20984110	ENSG00000258599.2	-	processed_pseudogene	KNOWN	RP11-84C10.1	1	2	0.305296
chr14	20989770	20997035	20993402	ENSG00000165792.17	+	protein_coding	KNOWN	METTL17	25	14	0.536092
chr14	20995837	20999163	20997500	ENSG00000258471.1	-	antisense	KNOWN	RP11-84C10.4	1	4	0.543604
chr14	20999255	21001871	21000563	ENSG00000165794.9	+	protein_coding	KNOWN	SLC39A2	3	4	0.543604
chr14	21016763	21070872	21043817	ENSG00000165795.21	-	protein_coding	KNOWN	NDRG2	78	18	0.641113
chr14	21023314	21023386	21023350	ENSG00000278629.1	-	miRNA	KNOWN	MIR6717	1	1	0.501104
chr14	21024109	21036276	21030192	ENSG00000179636.14	+	protein_coding	KNOWN	TPPP2	12	4	0.552138
chr14	21024172	21029271	21026721	ENSG00000258604.1	+	lincRNA	KNOWN	AL161668.5	2	3	0.501104
chr14	21032818	21033895	21033356	ENSG00000255472.1	+	antisense	KNOWN	RP11-998D10.1	1	2	0.600025
chr14	21032820	21034785	21033802	ENSG00000206150.3	-	protein_coding	KNOWN	RNASE13	1	2	0.600025
chr14	21042226	21044234	21043230	ENSG00000165799.4	+	protein_coding	KNOWN	RNASE7	2	3	0.600025
chr14	21057822	21058455	21058138	ENSG00000173431.2	+	protein_coding	KNOWN	RNASE8	1	1	0.766801
chr14	21070270	21090240	21080255	ENSG00000165801.9	+	protein_coding	KNOWN	ARHGEF40	8	24	0.827618
chr14	21090046	21104722	21097384	ENSG00000165804.15	-	protein_coding	KNOWN	ZNF219	13	5	0.983680
chr14	21098937	21103724	21101330	ENSG00000232070.8	+	protein_coding	KNOWN	TMEM253	6	8	0.983680
chr14	21108043	21116703	21112373	ENSG00000178107.2	+	lincRNA	KNOWN	RP11-998D10.4	1	2	0.576627
chr14	21110295	21113472	21111883	ENSG00000258722.2	-	processed_pseudogene	KNOWN	CKAP2P1	1	3	0.457863
chr14	21113639	21113745	21113692	ENSG00000200102.1	-	snRNA	KNOWN	RNU6-252P	1	1	0.457863
chr14	21154865	21156063	21155464	ENSG00000169327.4	-	protein_coding	KNOWN	OR5AU1	1	1	-0.036165
chr14	21162513	21163743	21163128	ENSG00000259102.2	+	processed_pseudogene	KNOWN	SMARCE1P3	1	1	-0.036165
chr14	21184341	21184959	21184650	ENSG00000258906.2	-	processed_pseudogene	KNOWN	CTD-2552B11.3	1	1	0.176056
chr14	21200079	21206900	21203489	ENSG00000258441.1	-	processed_transcript	KNOWN	LINC00641	2	2	0.258184
chr14	21209136	21269494	21239315	ENSG00000092199.17	-	protein_coding	KNOWN	HNRNPC	33	11	0.395421
chr14	21287939	21351301	21319620	ENSG00000092200.12	+	protein_coding	KNOWN	RPGRIP1	13	24	0.352752
chr14	21351472	21384266	21367869	ENSG00000092201.9	-	protein_coding	KNOWN	SUPT16H	8	26	0.461160
chr14	21384292	21384920	21384606	ENSG00000260830.1	+	antisense	KNOWN	RP11-524O1.4	1	1	0.545164
chr14	21385194	21456126	21420660	ENSG00000100888.12	-	protein_coding	KNOWN	CHD8	14	38	0.543992
chr14	21392150	21392253	21392201	ENSG00000199436.1	-	snoRNA	KNOWN	SNORD9	1	1	0.536602
chr14	21397292	21397401	21397346	ENSG00000200785.1	-	snoRNA	KNOWN	SNORD8	1	1	0.536602
chr14	21398925	21399282	21399103	ENSG00000241035.2	+	processed_pseudogene	KNOWN	RP11-689J19.1	1	1	0.536602
chr14	21419620	21419960	21419790	ENSG00000258870.1	+	processed_pseudogene	KNOWN	EIF4EBP1P1	1	1	0.569812
chr14	21429508	21429806	21429657	ENSG00000274475.1	-	misc_RNA	KNOWN	RN7SL650P	1	1	0.569812
chr14	21459020	21476973	21467996	ENSG00000129472.12	-	protein_coding	KNOWN	RAB2B	6	9	0.436412
chr14	21476597	21499175	21487886	ENSG00000092203.13	+	protein_coding	KNOWN	TOX4	12	10	0.254203
chr14	21498133	21511375	21504754	ENSG00000165819.11	-	protein_coding	KNOWN	METTL3	14	11	0.287746
chr14	21521081	21537216	21529148	ENSG00000165821.11	-	protein_coding	KNOWN	SALL2	7	4	0.433888
chr14	21521083	21522660	21521871	ENSG00000257096.1	+	antisense	KNOWN	AE000658.22	1	2	0.373012
chr14	21563819	21565084	21564451	ENSG00000256737.1	+	processed_pseudogene	KNOWN	RBBP4P5	1	1	0.469796
chr14	21569803	21570744	21570273	ENSG00000169208.1	-	protein_coding	KNOWN	OR10G3	1	1	0.086993
chr14	21585290	21586280	21585785	ENSG00000256081.2	-	processed_pseudogene	KNOWN	AE000658.25	1	1	-0.013718
chr14	21601899	21602825	21602362	ENSG00000273586.1	-	unprocessed_pseudogene	KNOWN	OR10G1P	1	1	-0.320607
chr14	21611924	21612381	21612152	ENSG00000256385.1	-	processed_pseudogene	KNOWN	UBE2NP1	1	1	0.109270
chr14	21621838	21622567	21622202	ENSG00000255569.1	+	TR_V_gene	KNOWN	TRAV1-1	1	2	0.109270
chr14	21633836	21634940	21634388	ENSG00000255582.1	-	protein_coding	KNOWN	OR10G2	1	1	-0.132882
chr14	21642889	21643578	21643233	ENSG00000256553.1	+	TR_V_gene	KNOWN	TRAV1-2	1	2	-0.132882
chr14	21649728	21650337	21650032	ENSG00000255664.1	-	processed_pseudogene	KNOWN	ARL6IP1P1	1	1	-0.074287
chr14	21665083	21666024	21665553	ENSG00000221977.1	+	protein_coding	KNOWN	OR4E2	1	1	-0.027307
chr14	21669990	21670935	21670462	ENSG00000276240.1	-	processed_pseudogene	KNOWN	OR4E1	1	1	-0.394444
chr14	21698954	21699151	21699052	ENSG00000256350.1	-	unprocessed_pseudogene	KNOWN	AE000658.30	1	1	-0.296279
chr14	21712321	21712843	21712582	ENSG00000211776.2	+	TR_V_gene	KNOWN	TRAV2	1	2	-0.074469
chr14	21714795	21716262	21715528	ENSG00000248358.2	-	lincRNA	KNOWN	AE000658.31	1	2	-0.074469
chr14	21723713	21724321	21724017	ENSG00000211777.2	+	TR_V_gene	KNOWN	TRAV3	1	2	-0.074469
chr14	21736152	21736982	21736567	ENSG00000211778.2	+	TR_V_gene	KNOWN	TRAV4	1	2	-0.169548
chr14	21749178	21749705	21749441	ENSG00000211779.3	+	TR_V_gene	KNOWN	TRAV5	1	2	-0.169548
chr14	21750269	21751546	21750907	ENSG00000240954.1	+	processed_pseudogene	KNOWN	RPL4P1	1	1	0.046763
chr14	21768489	21769080	21768784	ENSG00000211780.3	+	TR_V_gene	KNOWN	TRAV6	1	2	0.046763
chr14	21780568	21780649	21780608	ENSG00000222776.1	+	miRNA	NOVEL	AC243980.1	1	1	-0.404161
chr14	21782993	21783503	21783248	ENSG00000211781.3	+	TR_V_gene	KNOWN	TRAV7	1	2	-0.404161
chr14	21797287	21797886	21797586	ENSG00000211782.2	+	TR_V_gene	KNOWN	TRAV8-1	1	2	-0.327464
chr14	21811502	21811977	21811739	ENSG00000211783.3	+	TR_V_gene	KNOWN	TRAV9-1	1	2	-0.508401
chr14	21825472	21826075	21825773	ENSG00000211784.2	+	TR_V_gene	KNOWN	TRAV10	1	2	-0.508401
chr14	21829539	21830070	21829804	ENSG00000256474.1	+	TR_V_pseudogene	KNOWN	TRAV11	1	2	-0.461701
chr14	21841240	21841774	21841507	ENSG00000211785.1	+	TR_V_gene	KNOWN	TRAV12-1	1	2	-0.159141
chr14	21846537	21847221	21846879	ENSG00000211786.3	+	TR_V_gene	KNOWN	TRAV8-2	1	2	-0.159141
chr14	21852558	21853006	21852782	ENSG00000211787.1	+	TR_V_gene	KNOWN	TRAV8-3	1	2	-0.581409
chr14	21868839	21869365	21869102	ENSG00000211788.2	+	TR_V_gene	KNOWN	TRAV13-1	1	2	-0.581409
chr14	21887857	21888502	21888179	ENSG00000211789.2	+	TR_V_gene	KNOWN	TRAV12-2	1	2	-0.516054
chr14	21894433	21895030	21894731	ENSG00000211790.2	+	TR_V_gene	KNOWN	TRAV8-4	1	2	-0.317263
chr14	21903077	21903598	21903337	ENSG00000256379.1	+	TR_V_pseudogene	KNOWN	TRAV8-5	1	2	-0.317263
chr14	21918188	21918756	21918472	ENSG00000211791.2	+	TR_V_gene	KNOWN	TRAV13-2	1	2	-0.092433
chr14	21924063	21924651	21924357	ENSG00000211792.2	+	TR_V_gene	KNOWN	TRAV14DV4	1	2	-0.092433
chr14	21941128	21941657	21941392	ENSG00000211793.2	+	TR_V_gene	KNOWN	TRAV9-2	1	2	-0.653435
chr14	21950406	21950654	21950530	ENSG00000258482.1	+	TR_V_pseudogene	KNOWN	TRAV15	1	1	-0.271820
chr14	21962819	21963042	21962930	ENSG00000258557.1	-	processed_pseudogene	KNOWN	AE000659.41	1	1	-0.271820
chr14	21965451	21966061	21965756	ENSG00000211794.3	+	TR_V_gene	KNOWN	TRAV12-3	1	2	-0.271820
chr14	21978459	21979120	21978789	ENSG00000211795.3	+	TR_V_gene	KNOWN	TRAV8-6	1	2	-0.264801
chr14	21990496	21990938	21990717	ENSG00000211796.1	+	TR_V_gene	KNOWN	TRAV16	1	2	-0.299330
chr14	21997539	21998168	21997853	ENSG00000211797.2	+	TR_V_gene	KNOWN	TRAV17	1	2	-0.299330
chr14	22003106	22003673	22003389	ENSG00000211798.3	+	TR_V_gene	KNOWN	TRAV18	1	2	-0.299330
chr14	22007512	22008181	22007846	ENSG00000211799.3	+	TR_V_gene	KNOWN	TRAV19	1	2	-0.299330
chr14	22011910	22014964	22013437	ENSG00000258705.2	+	processed_pseudogene	KNOWN	AE000660.4	1	1	0.005952
chr14	22040594	22041153	22040873	ENSG00000211800.3	+	TR_V_gene	KNOWN	TRAV20	1	2	0.020607
chr14	22052514	22053056	22052785	ENSG00000211801.3	+	TR_V_gene	KNOWN	TRAV21	1	2	-0.204990
chr14	22066016	22066373	22066194	ENSG00000276428.1	+	processed_pseudogene	KNOWN	AE000660.21	1	1	-0.204990
chr14	22070557	22071208	22070882	ENSG00000211802.3	+	TR_V_gene	KNOWN	TRAV22	1	2	-0.153121
chr14	22086407	22086961	22086684	ENSG00000211803.2	+	TR_V_gene	KNOWN	TRAV23DV6	1	2	-0.153121
chr14	22096032	22096619	22096325	ENSG00000211804.3	+	TR_V_gene	KNOWN	TRDV1	2	2	-0.099307
chr14	22105343	22105846	22105594	ENSG00000211805.1	+	TR_V_gene	KNOWN	TRAV24	1	2	-0.099307
chr14	22112347	22113031	22112689	ENSG00000211806.2	+	TR_V_gene	KNOWN	TRAV25	1	2	-0.253936
chr14	22123318	22124285	22123801	ENSG00000211807.3	+	TR_V_gene	KNOWN	TRAV26-1	1	2	-0.253936
chr14	22132553	22133034	22132793	ENSG00000211808.3	+	TR_V_gene	KNOWN	TRAV8-7	1	2	-0.339058
chr14	22142926	22143003	22142964	ENSG00000238634.1	+	miRNA	NOVEL	AC245470.1	1	1	-0.339058
chr14	22147995	22148633	22148314	ENSG00000211809.2	+	TR_V_gene	KNOWN	TRAV27	1	2	-0.339058
chr14	22155079	22155638	22155358	ENSG00000258835.1	+	TR_V_pseudogene	KNOWN	TRAV28	1	2	-0.144243
chr14	22163238	22163870	22163554	ENSG00000211810.3	+	TR_V_gene	KNOWN	TRAV29DV5	1	2	-0.144243
chr14	22168429	22168988	22168708	ENSG00000259092.1	+	TR_V_gene	KNOWN	TRAV30	1	2	-0.144243
chr14	22177273	22177864	22177568	ENSG00000249048.2	+	TR_V_pseudogene	KNOWN	TRAV31	1	2	-0.099489
chr14	22185562	22186057	22185809	ENSG00000258905.1	+	TR_V_pseudogene	KNOWN	TRAV32	1	2	-0.099489
chr14	22190158	22190713	22190435	ENSG00000258812.1	+	TR_V_pseudogene	KNOWN	TRAV33	1	2	-0.248552
chr14	22202583	22203368	22202975	ENSG00000211812.1	+	TR_V_gene	KNOWN	TRAV26-2	1	2	-0.248552
chr14	22207522	22208129	22207825	ENSG00000211813.2	+	TR_V_gene	KNOWN	TRAV34	1	2	-0.248552
chr14	22221896	22222475	22222185	ENSG00000211814.1	+	TR_V_pseudogene	KNOWN	TRAV35	1	2	-0.121182
chr14	22226746	22227254	22227000	ENSG00000211815.3	+	TR_V_gene	KNOWN	TRAV36DV7	1	2	-0.121182
chr14	22265749	22266264	22266006	ENSG00000259068.1	+	TR_V_pseudogene	KNOWN	TRAV37	1	2	-0.112699
chr14	22271968	22272563	22272265	ENSG00000211816.2	+	TR_V_gene	KNOWN	TRAV38-1	1	2	-0.019040
chr14	22281105	22281748	22281426	ENSG00000211817.2	+	TR_V_gene	KNOWN	TRAV38-2DV8	1	2	-0.019040
chr14	22304054	22304553	22304303	ENSG00000211818.1	+	TR_V_gene	KNOWN	TRAV39	1	2	-0.040763
chr14	22314490	22314919	22314704	ENSG00000211819.3	+	TR_V_gene	KNOWN	TRAV40	1	2	0.191527
chr14	22320188	22320691	22320439	ENSG00000211820.1	+	TR_V_gene	KNOWN	TRAV41	1	2	0.191527
chr14	22332922	22334685	22333803	ENSG00000256221.1	-	processed_pseudogene	KNOWN	AE000661.36	1	2	-0.152546
chr14	22380680	22482959	22431819	ENSG00000251002.7	-	processed_transcript	KNOWN	AE000661.37	7	6	0.161569
chr14	22417836	22418657	22418246	ENSG00000259042.2	+	lincRNA	KNOWN	AE000661.50	1	2	0.394978
chr14	22422371	22423042	22422706	ENSG00000211821.2	+	TR_V_gene	KNOWN	TRDV2	1	2	0.394978
chr14	22438547	22438554	22438550	ENSG00000223997.1	+	TR_D_gene	KNOWN	TRDD1	1	1	0.468555
chr14	22439007	22439015	22439011	ENSG00000237235.2	+	TR_D_gene	KNOWN	TRDD2	1	1	0.468555
chr14	22449113	22449125	22449119	ENSG00000228985.1	+	TR_D_gene	KNOWN	TRDD3	1	1	0.468555
chr14	22450089	22450139	22450114	ENSG00000211825.1	+	TR_J_gene	KNOWN	TRDJ1	1	1	-0.014398
chr14	22455249	22455296	22455272	ENSG00000211826.1	+	TR_J_gene	KNOWN	TRDJ4	1	1	-0.014398
chr14	22456689	22456742	22456715	ENSG00000211827.1	+	TR_J_gene	KNOWN	TRDJ2	1	1	-0.014398
chr14	22459098	22459156	22459127	ENSG00000211828.1	+	TR_J_gene	KNOWN	TRDJ3	1	1	-0.014398
chr14	22462932	22465787	22464359	ENSG00000211829.7	+	TR_C_gene	KNOWN	TRDC	1	4	-0.014398
chr14	22469041	22469698	22469369	ENSG00000256590.2	-	TR_V_gene	KNOWN	TRDV3	1	2	-0.014398
chr14	22475316	22475375	22475345	ENSG00000211831.2	+	TR_J_gene	KNOWN	TRAJ61	1	1	-0.152631
chr14	22476306	22476362	22476334	ENSG00000249446.2	+	TR_J_pseudogene	KNOWN	TRAJ60	1	1	-0.152631
chr14	22476553	22476606	22476579	ENSG00000211832.2	+	TR_J_gene	KNOWN	TRAJ59	1	1	-0.152631
chr14	22477707	22477769	22477738	ENSG00000211833.1	+	TR_J_gene	KNOWN	TRAJ58	1	1	-0.152631
chr14	22478872	22478934	22478903	ENSG00000211834.1	+	TR_J_gene	KNOWN	TRAJ57	1	1	-0.152631
chr14	22479521	22479582	22479551	ENSG00000211835.1	+	TR_J_gene	KNOWN	TRAJ56	1	1	-0.152631
chr14	22481697	22481753	22481725	ENSG00000250688.1	+	TR_J_pseudogene	KNOWN	TRAJ55	1	1	-0.152631
chr14	22482287	22482346	22482316	ENSG00000211836.1	+	TR_J_gene	KNOWN	TRAJ54	1	1	-0.152631
chr14	22483004	22483069	22483036	ENSG00000211837.1	+	TR_J_gene	KNOWN	TRAJ53	1	1	-0.152631
chr14	22486228	22486296	22486262	ENSG00000211838.1	+	TR_J_gene	KNOWN	TRAJ52	1	1	-0.152631
chr14	22487183	22487245	22487214	ENSG00000248366.1	+	TR_J_pseudogene	KNOWN	TRAJ51	1	1	-0.152631
chr14	22488593	22488652	22488622	ENSG00000211839.1	+	TR_J_gene	KNOWN	TRAJ50	1	1	-0.152631
chr14	22489488	22489543	22489515	ENSG00000211840.1	+	TR_J_gene	KNOWN	TRAJ49	1	1	-0.152631
chr14	22490491	22490553	22490522	ENSG00000211841.1	+	TR_J_gene	KNOWN	TRAJ48	1	1	0.149579
chr14	22492851	22492907	22492879	ENSG00000211842.1	+	TR_J_gene	KNOWN	TRAJ47	1	1	0.149579
chr14	22493403	22493465	22493434	ENSG00000211843.1	+	TR_J_gene	KNOWN	TRAJ46	1	1	0.149579
chr14	22493925	22493990	22493957	ENSG00000211844.1	+	TR_J_gene	KNOWN	TRAJ45	1	1	0.149579
chr14	22494821	22494883	22494852	ENSG00000211845.1	+	TR_J_gene	KNOWN	TRAJ44	1	1	0.149579
chr14	22495913	22495966	22495939	ENSG00000211846.1	+	TR_J_gene	KNOWN	TRAJ43	1	1	0.149579
chr14	22496887	22496952	22496919	ENSG00000211847.1	+	TR_J_gene	KNOWN	TRAJ42	1	1	0.149579
chr14	22497657	22497718	22497687	ENSG00000211848.1	+	TR_J_gene	KNOWN	TRAJ41	1	1	0.149579
chr14	22499689	22499749	22499719	ENSG00000211849.1	+	TR_J_gene	KNOWN	TRAJ40	1	1	0.149579
chr14	22501601	22501663	22501632	ENSG00000211850.1	+	TR_J_gene	KNOWN	TRAJ39	1	1	0.149579
chr14	22502231	22502292	22502261	ENSG00000211851.1	+	TR_J_gene	KNOWN	TRAJ38	1	1	0.149579
chr14	22503750	22503814	22503782	ENSG00000278661.1	+	TR_J_gene	KNOWN	TRAJ37	1	1	0.149579
chr14	22505110	22505167	22505138	ENSG00000276699.1	+	TR_J_gene	KNOWN	TRAJ36	1	1	0.149579
chr14	22506644	22506702	22506673	ENSG00000211854.1	+	TR_J_gene	KNOWN	TRAJ35	1	1	0.149579
chr14	22507666	22507723	22507694	ENSG00000211855.1	+	TR_J_gene	KNOWN	TRAJ34	1	1	0.149579
chr14	22508602	22508658	22508630	ENSG00000211856.1	+	TR_J_gene	KNOWN	TRAJ33	1	1	0.149579
chr14	22509239	22552154	22530696	ENSG00000277734.5	+	TR_C_gene	KNOWN	TRAC	2	5	0.215488
chr14	22509341	22509406	22509373	ENSG00000211857.1	+	TR_J_gene	KNOWN	TRAJ32	1	1	0.149579
chr14	22510968	22511024	22510996	ENSG00000211858.1	+	TR_J_gene	KNOWN	TRAJ31	1	1	0.085005
chr14	22512852	22512908	22512880	ENSG00000211859.1	+	TR_J_gene	KNOWN	TRAJ30	1	1	0.085005
chr14	22513939	22513998	22513968	ENSG00000211860.1	+	TR_J_gene	KNOWN	TRAJ29	1	1	0.085005
chr14	22515623	22515688	22515655	ENSG00000211861.1	+	TR_J_gene	KNOWN	TRAJ28	1	1	0.085005
chr14	22516273	22516331	22516302	ENSG00000211862.1	+	TR_J_gene	KNOWN	TRAJ27	1	1	0.085005
chr14	22518446	22518505	22518475	ENSG00000211863.1	+	TR_J_gene	KNOWN	TRAJ26	1	1	0.085005
chr14	22518812	22518871	22518841	ENSG00000211864.2	+	TR_J_gene	KNOWN	TRAJ25	1	1	0.085005
chr14	22519969	22520031	22520000	ENSG00000211865.1	+	TR_J_gene	KNOWN	TRAJ24	1	1	0.085005
chr14	22520416	22520478	22520447	ENSG00000211866.1	+	TR_J_gene	KNOWN	TRAJ23	1	1	0.085005
chr14	22522040	22522102	22522071	ENSG00000211867.1	+	TR_J_gene	KNOWN	TRAJ22	1	1	0.085005
chr14	22523600	22523654	22523627	ENSG00000211868.1	+	TR_J_gene	KNOWN	TRAJ21	1	1	0.085005
chr14	22524325	22524381	22524353	ENSG00000211869.1	+	TR_J_gene	KNOWN	TRAJ20	1	1	0.085005
chr14	22525263	22525322	22525292	ENSG00000211870.1	+	TR_J_gene	KNOWN	TRAJ19	1	1	0.085005
chr14	22525650	22525715	22525682	ENSG00000211871.1	+	TR_J_gene	KNOWN	TRAJ18	1	1	0.085005
chr14	22526844	22526906	22526875	ENSG00000211872.1	+	TR_J_gene	KNOWN	TRAJ17	1	1	0.085005
chr14	22528527	22528586	22528556	ENSG00000211873.1	+	TR_J_gene	KNOWN	TRAJ16	1	1	0.085005
chr14	22530327	22530378	22530352	ENSG00000211875.1	+	TR_J_gene	KNOWN	TRAJ14	1	1	0.287437
chr14	22531076	22531138	22531107	ENSG00000211876.1	+	TR_J_gene	KNOWN	TRAJ13	1	1	0.287437
chr14	22531939	22531998	22531968	ENSG00000211877.1	+	TR_J_gene	KNOWN	TRAJ12	1	1	0.287437
chr14	22532502	22532561	22532531	ENSG00000211878.1	+	TR_J_gene	KNOWN	TRAJ11	1	1	0.287437
chr14	22533497	22533560	22533528	ENSG00000211879.1	+	TR_J_gene	KNOWN	TRAJ10	1	1	0.287437
chr14	22535554	22535614	22535584	ENSG00000211880.1	+	TR_J_gene	KNOWN	TRAJ9	1	1	0.287437
chr14	22536145	22536204	22536174	ENSG00000211881.1	+	TR_J_pseudogene	KNOWN	TRAJ8	1	1	0.287437
chr14	22537622	22537680	22537651	ENSG00000211882.1	+	TR_J_gene	KNOWN	TRAJ7	1	1	0.287437
chr14	22539073	22539134	22539103	ENSG00000211883.1	+	TR_J_gene	KNOWN	TRAJ6	1	1	0.287437
chr14	22540247	22540306	22540276	ENSG00000211884.1	+	TR_J_gene	KNOWN	TRAJ5	1	1	0.287437
chr14	22542199	22542261	22542230	ENSG00000211885.1	+	TR_J_gene	KNOWN	TRAJ4	1	1	0.287437
chr14	22543179	22543240	22543209	ENSG00000211886.1	+	TR_J_gene	KNOWN	TRAJ3	1	1	0.287437
chr14	22544071	22544136	22544103	ENSG00000211887.2	+	TR_J_gene	KNOWN	TRAJ2	1	1	0.287437
chr14	22545037	22545098	22545067	ENSG00000211888.2	+	TR_J_gene	KNOWN	TRAJ1	1	1	0.287437
chr14	22556311	22557062	22556686	ENSG00000259054.1	-	lincRNA	KNOWN	AE000662.93	1	3	0.781970
chr14	22556640	22559037	22557838	ENSG00000259003.1	+	lincRNA	KNOWN	AE000662.92	1	4	0.781970
chr14	22564905	22589269	22577087	ENSG00000129562.10	-	protein_coding	KNOWN	DAD1	5	3	0.637726
chr14	22595808	22598946	22597377	ENSG00000275552.1	-	antisense	KNOWN	CH17-302M23.1	1	2	0.703138
chr14	22598237	22613215	22605726	ENSG00000100439.10	+	protein_coding	KNOWN	ABHD4	10	7	0.764495
chr14	22633768	22634811	22634289	ENSG00000255804.1	-	protein_coding	KNOWN	OR6J1	1	1	0.825053
chr14	22638099	22638473	22638286	ENSG00000279510.1	-	protein_coding	KNOWN	AC243945.1	1	1	0.825053
chr14	22694098	22694535	22694316	ENSG00000242061.1	-	processed_pseudogene	KNOWN	CTD-2555K7.1	1	1	0.573644
chr14	22702143	22703065	22702604	ENSG00000235213.1	+	unprocessed_pseudogene	KNOWN	OR6E1P	1	1	0.573644
chr14	22702611	22766562	22734586	ENSG00000258458.5	-	processed_transcript	KNOWN	CTD-2555K7.2	4	5	0.332498
chr14	22723476	22726572	22725024	ENSG00000258823.1	-	unprocessed_pseudogene	KNOWN	CTD-2555K7.3	1	4	0.143522
chr14	22756761	22756829	22756795	ENSG00000212302.1	-	snoRNA	NOVEL	SNORD41	1	1	0.406865
chr14	22766522	22773041	22769781	ENSG00000155463.12	+	protein_coding	KNOWN	OXA1L	13	10	0.631472
chr14	22773222	22829820	22801521	ENSG00000155465.18	-	protein_coding	KNOWN	SLC7A7	21	11	0.697186
chr14	22829879	22835037	22832458	ENSG00000172590.18	+	protein_coding	KNOWN	MRPL52	17	5	1.060525
chr14	22836557	22849027	22842792	ENSG00000157227.12	+	protein_coding	KNOWN	MMP14	6	10	1.064335
chr14	22852616	22852728	22852672	ENSG00000212335.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.038694
chr14	22867818	22867917	22867867	ENSG00000199716.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.038694
chr14	22871613	22881580	22876596	ENSG00000197324.8	+	protein_coding	KNOWN	LRP10	5	8	1.104592
chr14	22883165	22887686	22885425	ENSG00000139890.9	+	protein_coding	KNOWN	REM2	2	5	1.104592
chr14	22893206	22919184	22906195	ENSG00000100461.17	-	protein_coding	KNOWN	RBM23	33	14	1.033833
chr14	22918947	22926900	22922923	ENSG00000237054.9	+	antisense	KNOWN	PRMT5-AS1	7	4	0.991063
chr14	22920511	22929585	22925048	ENSG00000100462.15	-	protein_coding	KNOWN	PRMT5	28	17	0.991063
chr14	22929609	22955562	22942585	ENSG00000257285.5	+	antisense	KNOWN	RP11-298I3.1	2	3	1.162038
chr14	22946228	22957161	22951694	ENSG00000092036.16	-	protein_coding	KNOWN	HAUS4	21	10	1.072697
chr14	22946270	22982258	22964264	ENSG00000259132.1	-	protein_coding	KNOWN	RP11-298I3.5	1	5	0.998922
chr14	22956950	22957029	22956989	ENSG00000265037.1	-	miRNA	KNOWN	MIR4707	1	1	1.000199
chr14	22971174	22982642	22976908	ENSG00000129474.15	-	protein_coding	KNOWN	AJUBA	8	9	0.932514
chr14	22982698	22999078	22990888	ENSG00000258457.5	+	antisense	KNOWN	RP11-298I3.4	3	4	1.080360
chr14	22985908	23010166	22998037	ENSG00000100802.14	-	protein_coding	KNOWN	C14orf93	21	8	1.151164
chr14	23005499	23007123	23006311	ENSG00000280129.1	-	TEC	KNOWN	RP11-298I3.3	1	1	1.199253
chr14	23016543	23035230	23025886	ENSG00000100804.18	-	protein_coding	KNOWN	PSMB5	6	4	0.732495
chr14	23023083	23024217	23023650	ENSG00000279656.1	-	TEC	KNOWN	RP11-298I3.6	1	1	0.748213
chr14	23033530	23033638	23033584	ENSG00000207765.1	-	miRNA	NOVEL	AL132780.1	1	1	0.692061
chr14	23042167	23044276	23043221	ENSG00000222028.3	+	protein_coding	KNOWN	PSMB11	1	1	0.692061
chr14	23047062	23057538	23052300	ENSG00000139880.19	-	protein_coding	KNOWN	CDH24	6	14	0.991469
chr14	23058564	23095614	23077089	ENSG00000100813.14	-	protein_coding	KNOWN	ACIN1	23	19	1.074025
chr14	23094765	23100462	23097613	ENSG00000179933.5	+	protein_coding	KNOWN	C14orf119	2	2	0.578583
chr14	23117304	23119616	23118460	ENSG00000092067.5	-	protein_coding	KNOWN	CEBPE	1	2	1.041502
chr14	23125295	23183674	23154484	ENSG00000092068.18	-	protein_coding	KNOWN	SLC7A8	16	12	0.821768
chr14	23156309	23156414	23156361	ENSG00000202229.1	-	snRNA	KNOWN	RNU6-1138P	1	1	0.666686
chr14	23185316	23273477	23229396	ENSG00000215277.8	+	protein_coding	KNOWN	RNF212B	9	16	0.385623
chr14	23229961	23230116	23230038	ENSG00000240131.1	-	processed_pseudogene	KNOWN	RP11-124D2.1	1	1	0.316398
chr14	23259460	23259566	23259513	ENSG00000252347.1	-	snRNA	KNOWN	RNU6-1046P	1	1	0.334268
chr14	23272422	23299447	23285934	ENSG00000215271.7	-	protein_coding	KNOWN	HOMEZ	4	3	0.646386
chr14	23293852	23295798	23294825	ENSG00000270433.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-124D2.7	2	2	0.716024
chr14	23295643	23302848	23299245	ENSG00000235194.8	-	protein_coding	KNOWN	PPP1R3E	9	5	0.716024
chr14	23298790	23311759	23305274	ENSG00000129473.9	+	protein_coding	KNOWN	BCL2L2	6	4	0.766325
chr14	23306835	23325369	23316102	ENSG00000258643.5	+	protein_coding	KNOWN	BCL2L2-PABPN1	3	9	1.023402
chr14	23321289	23326185	23323737	ENSG00000100836.10	+	protein_coding	KNOWN	PABPN1	8	7	1.086678
chr14	23346306	23352912	23349609	ENSG00000092096.14	-	protein_coding	KNOWN	SLC22A17	9	10	0.618804
chr14	23356402	23365752	23361077	ENSG00000100842.12	-	protein_coding	KNOWN	EFS	3	6	0.620052
chr14	23356406	23357003	23356704	ENSG00000259018.1	+	antisense	KNOWN	RP11-124D2.3	1	2	0.620052
chr14	23372809	23376403	23374606	ENSG00000166090.8	+	protein_coding	KNOWN	IL25	2	3	0.679444
chr14	23376808	23379772	23378290	ENSG00000166091.19	+	protein_coding	KNOWN	CMTM5	8	6	0.679444
chr14	23381990	23408277	23395133	ENSG00000197616.11	-	protein_coding	KNOWN	MYH6	3	39	0.636173
chr14	23388590	23388672	23388631	ENSG00000199157.1	-	miRNA	KNOWN	MIR208A	1	1	0.679444
chr14	23412738	23435718	23424228	ENSG00000092054.12	-	protein_coding	KNOWN	MYH7	1	40	0.702209
chr14	23415339	23415686	23415512	ENSG00000258444.1	+	antisense	KNOWN	CTD-2201G16.1	1	2	0.766321
chr14	23417987	23418063	23418025	ENSG00000215991.1	-	miRNA	KNOWN	MIR208B	1	1	0.766321
chr14	23469688	23509862	23489775	ENSG00000129460.15	+	protein_coding	KNOWN	NGDN	13	11	0.617428
chr14	23511760	23560778	23536269	ENSG00000157306.14	+	processed_transcript	KNOWN	RP11-66N24.4	5	5	0.698459
chr14	23520855	23556192	23538523	ENSG00000136367.13	-	protein_coding	KNOWN	ZFHX2	5	10	0.820759
chr14	23530682	23532367	23531524	ENSG00000273618.1	+	antisense	KNOWN	RP11-66N24.7	1	1	1.131281
chr14	23555988	23560271	23558129	ENSG00000259431.5	+	protein_coding	KNOWN	THTPA	8	3	0.704969
chr14	23559565	23568070	23563817	ENSG00000213983.11	-	protein_coding	KNOWN	AP1G2	34	22	0.704969
chr14	23561097	23568073	23564585	ENSG00000258727.1	+	antisense	KNOWN	RP11-66N24.3	1	4	0.704969
chr14	23568035	23578800	23573417	ENSG00000092051.16	-	protein_coding	KNOWN	JPH4	5	7	0.926692
chr14	23619201	23620012	23619606	ENSG00000274002.1	+	lincRNA	KNOWN	RP11-66N24.6	1	1	0.226128
chr14	23630115	23645639	23637877	ENSG00000100867.14	+	protein_coding	KNOWN	DHRS2	10	9	0.520612
chr14	23729038	23729741	23729389	ENSG00000258464.1	-	processed_transcript	KNOWN	RP11-388E23.2	2	2	0.165573
chr14	23749236	23751150	23750193	ENSG00000259043.1	+	processed_pseudogene	KNOWN	BRD7P1	1	1	0.145057
chr14	23767662	23768998	23768330	ENSG00000270618.1	+	unprocessed_pseudogene	KNOWN	RP11-388E23.4	1	2	0.132406
chr14	23791930	23792236	23792083	ENSG00000222931.1	+	misc_RNA	KNOWN	RN7SKP205	1	1	0.091992
chr14	23825636	23827396	23826516	ENSG00000258887.2	-	unprocessed_pseudogene	KNOWN	RP11-388E23.3	1	3	-0.419786
chr14	23922247	23934568	23928407	ENSG00000259334.1	-	lincRNA	KNOWN	LINC00596	1	3	0.428997
chr14	23938731	23988839	23963785	ENSG00000215256.3	-	antisense	KNOWN	DHRS4-AS1	6	3	0.471212
chr14	23953586	23969279	23961432	ENSG00000157326.18	+	protein_coding	KNOWN	DHRS4	8	8	0.534660
chr14	23969874	24006408	23988141	ENSG00000187630.14	+	protein_coding	KNOWN	DHRS4L2	12	10	0.566282
chr14	24036453	24051028	24043740	ENSG00000225766.8	+	transcribed_unprocessed_pseudogene	KNOWN	DHRS4L1	5	9	0.497619
chr14	24052000	24069728	24060864	ENSG00000186648.14	+	protein_coding	KNOWN	LRRC16B	4	40	0.861986
chr14	24070837	24078100	24074468	ENSG00000100884.9	+	protein_coding	KNOWN	CPNE6	19	18	0.796390
chr14	24080107	24115014	24097560	ENSG00000129535.12	-	protein_coding	KNOWN	NRL	6	4	1.068092
chr14	24094053	24110598	24102325	ENSG00000100889.11	+	protein_coding	KNOWN	PCK2	16	10	1.245459
chr14	24114195	24125242	24119718	ENSG00000100897.17	+	protein_coding	KNOWN	DCAF11	38	15	0.835216
chr14	24120956	24131829	24126392	ENSG00000259371.2	+	protein_coding	KNOWN	RP11-468E2.6	1	4	0.900456
chr14	24131275	24132849	24132062	ENSG00000139914.6	+	protein_coding	KNOWN	FITM1	2	2	1.222839
chr14	24136158	24138967	24137562	ENSG00000092010.14	+	protein_coding	KNOWN	PSME1	10	11	1.222839
chr14	24138959	24141588	24140273	ENSG00000100908.13	-	protein_coding	KNOWN	EMC9	7	6	1.222839
chr14	24139445	24140444	24139944	ENSG00000259321.1	+	lincRNA	KNOWN	RP11-468E2.5	1	2	1.222839
chr14	24143362	24147570	24145466	ENSG00000100911.13	-	protein_coding	KNOWN	PSME2	18	11	1.222839
chr14	24143489	24143565	24143527	ENSG00000276511.1	-	miRNA	KNOWN	MIR7703	1	1	1.222839
chr14	24146683	24160661	24153672	ENSG00000092098.16	+	protein_coding	KNOWN	RNF31	25	21	1.374522
chr14	24151218	24167402	24159310	ENSG00000259529.1	+	protein_coding	KNOWN	RP11-468E2.4	1	21	1.421697
chr14	24158603	24158722	24158662	ENSG00000199804.1	+	rRNA	KNOWN	RNA5SP383	1	1	1.421697
chr14	24161053	24166565	24163809	ENSG00000213928.8	+	protein_coding	KNOWN	IRF9	15	9	1.421697
chr14	24171853	24180257	24176055	ENSG00000100918.12	+	protein_coding	KNOWN	REC8	13	20	0.906880
chr14	24180219	24188964	24184591	ENSG00000196497.15	-	protein_coding	KNOWN	IPO4	20	30	0.906880
chr14	24180395	24190416	24185405	ENSG00000259522.2	-	protein_coding	KNOWN	RP11-468E2.2	2	31	0.925440
chr14	24189143	24195687	24192415	ENSG00000100926.14	-	protein_coding	KNOWN	TM9SF1	12	6	1.294549
chr14	24189157	24213473	24201315	ENSG00000254692.1	-	protein_coding	KNOWN	RP11-468E2.1	1	10	1.290583
chr14	24198433	24199090	24198761	ENSG00000276698.1	+	lincRNA	KNOWN	RP11-468E2.10	1	1	1.352890
chr14	24201612	24202811	24202211	ENSG00000278784.1	-	sense_intronic	KNOWN	RP11-468E2.11	1	1	1.352890
chr14	24205697	24208362	24207029	ENSG00000139908.14	+	protein_coding	KNOWN	TSSK4	7	4	1.352890
chr14	24209583	24213869	24211726	ENSG00000254505.9	-	protein_coding	KNOWN	CHMP4A	11	6	1.056715
chr14	24209646	24215987	24212816	ENSG00000260669.2	-	processed_transcript	KNOWN	AL136419.6	2	10	1.043138
chr14	24213937	24216070	24215003	ENSG00000213920.8	-	protein_coding	KNOWN	MDP1	10	6	1.024878
chr14	24213955	24232352	24223153	ENSG00000255526.6	-	protein_coding	KNOWN	NEDD8-MDP1	4	8	1.006010
chr14	24216852	24232454	24224653	ENSG00000129559.12	-	protein_coding	KNOWN	NEDD8	8	5	1.001666
chr14	24232422	24239242	24235832	ENSG00000100938.17	+	protein_coding	KNOWN	GMPR2	31	12	0.877358
chr14	24239643	24242674	24241158	ENSG00000092330.15	-	protein_coding	KNOWN	TINF2	15	9	0.877358
chr14	24249114	24264432	24256773	ENSG00000092295.11	-	protein_coding	KNOWN	TGM1	9	15	1.144063
chr14	24265538	24271739	24268638	ENSG00000100949.14	-	protein_coding	KNOWN	RABGGTA	21	17	1.163344
chr14	24290598	24299833	24295215	ENSG00000157379.13	-	protein_coding	KNOWN	DHRS1	11	9	0.831716
chr14	24299862	24309124	24304493	ENSG00000196943.12	+	protein_coding	KNOWN	NOP9	3	10	0.831716
chr14	24305096	24311430	24308263	ENSG00000136305.11	-	protein_coding	KNOWN	CIDEB	6	8	0.868216
chr14	24305734	24312053	24308893	ENSG00000213906.9	+	protein_coding	KNOWN	LTB4R2	5	3	0.884231
chr14	24311450	24318036	24314743	ENSG00000213903.8	+	protein_coding	KNOWN	LTB4R	5	2	0.993274
chr14	24318349	24335093	24326721	ENSG00000129467.13	-	protein_coding	KNOWN	ADCY4	19	26	0.972053
chr14	24332310	24337382	24334846	ENSG00000258973.1	-	protein_coding	KNOWN	RP11-934B9.3	1	4	0.923520
chr14	24336021	24340045	24338033	ENSG00000129465.15	-	protein_coding	KNOWN	RIPK3	7	10	0.923520
chr14	24365673	24379604	24372638	ENSG00000100968.13	+	protein_coding	KNOWN	NFATC4	33	11	1.000593
chr14	24398786	24419288	24409037	ENSG00000205978.5	+	protein_coding	KNOWN	NYNRIN	2	9	0.822790
chr14	24426532	24430954	24428743	ENSG00000139899.10	-	protein_coding	KNOWN	CBLN3	2	3	0.884202
chr14	24429286	24441834	24435560	ENSG00000100441.9	+	protein_coding	KNOWN	KHNYN	6	8	0.910933
chr14	24439766	24442905	24441335	ENSG00000100445.16	-	protein_coding	KNOWN	SDR39U1	22	6	0.913022
chr14	24501594	24508688	24505141	ENSG00000258744.1	+	antisense	KNOWN	RP11-80A15.1	1	2	0.170847
chr14	24505353	24508265	24506809	ENSG00000092009.10	-	protein_coding	KNOWN	CMA1	2	5	0.170847
chr14	24573522	24576260	24574891	ENSG00000100448.3	-	protein_coding	KNOWN	CTSG	2	5	-0.128134
chr14	24595723	24657774	24626748	ENSG00000258657.5	+	antisense	KNOWN	RP11-104E19.1	2	4	-0.116148
chr14	24606480	24609699	24608089	ENSG00000100450.12	-	protein_coding	KNOWN	GZMH	3	5	0.147133
chr14	24630954	24634267	24632610	ENSG00000100453.12	-	protein_coding	KNOWN	GZMB	9	6	-0.242704
chr14	24809656	25050297	24929976	ENSG00000168952.15	-	protein_coding	KNOWN	STXBP6	7	8	0.064611
chr14	24968813	24969619	24969216	ENSG00000281282.1	+	protein_coding	KNOWN	AL137164.1	1	2	-0.002526
chr14	25124487	25126998	25125742	ENSG00000258098.1	-	lincRNA	KNOWN	RP11-89K22.1	1	2	0.297217
chr14	25267064	25267336	25267200	ENSG00000257179.1	-	processed_pseudogene	KNOWN	HMGN2P6	1	1	-0.485984
chr14	25357764	25358689	25358226	ENSG00000258275.1	+	processed_pseudogene	KNOWN	OR7K1P	1	1	-0.198350
chr14	25431193	25432234	25431713	ENSG00000257976.1	-	processed_pseudogene	KNOWN	RP11-388G3.1	1	1	-0.139334
chr14	25806648	25806712	25806680	ENSG00000212270.1	-	snoRNA	NOVEL	SNORD37	1	1	-0.418970
chr14	25820366	25822741	25821553	ENSG00000279521.1	+	TEC	KNOWN	RP11-314P15.1	1	1	-0.026064
chr14	25835858	26143305	25989581	ENSG00000257986.1	-	lincRNA	KNOWN	RP11-314P15.2	1	5	-0.397775
chr14	26172166	26172258	26172212	ENSG00000212037.1	-	miRNA	NOVEL	AL049831.1	1	1	-0.395274
chr14	26208036	26208424	26208230	ENSG00000257503.1	+	processed_pseudogene	KNOWN	CYB5AP5	1	1	-0.505462
chr14	26443093	26597754	26520423	ENSG00000139910.19	-	protein_coding	KNOWN	NOVA1	13	6	-0.614760
chr14	26592747	26594517	26593632	ENSG00000262119.1	-	sense_intronic	KNOWN	RP11-483C6.1	1	1	-0.374326
chr14	26598412	26806467	26702439	ENSG00000257842.5	+	antisense	KNOWN	NOVA1-AS1	4	4	-0.461107
chr14	26775495	26822107	26798801	ENSG00000257845.1	-	lincRNA	KNOWN	RP11-626P14.1	1	4	-0.540702
chr14	26809417	26836458	26822937	ENSG00000257185.1	+	lincRNA	KNOWN	RP11-626P14.2	2	5	-0.640219
chr14	26836728	27160420	26998574	ENSG00000258081.3	+	lincRNA	KNOWN	RP11-384J4.2	2	6	-0.608293
chr14	26873133	26914743	26893938	ENSG00000257612.1	+	lincRNA	KNOWN	MIR4307HG	2	4	-0.550266
chr14	26908642	26908725	26908683	ENSG00000265165.1	+	miRNA	KNOWN	MIR4307	1	1	-0.198685
chr14	26927653	26927775	26927714	ENSG00000222899.1	+	miRNA	NOVEL	AL110292.1	1	1	-0.877202
chr14	27258717	27845286	27552001	ENSG00000258932.5	-	transcribed_processed_pseudogene	KNOWN	CTD-3006G17.2	5	6	-0.621073
chr14	27612588	27639636	27626112	ENSG00000258548.5	+	lincRNA	KNOWN	LINC00645	3	5	-0.716498
chr14	27633205	27633278	27633241	ENSG00000264657.1	-	miRNA	KNOWN	MIR3171	1	1	-0.928472
chr14	27990005	27990115	27990060	ENSG00000223164.1	+	miRNA	NOVEL	AL445384.1	1	1	-0.462320
chr14	28264390	28265974	28265182	ENSG00000197358.9	+	transcribed_processed_pseudogene	KNOWN	BNIP3P1	2	1	-0.651036
chr14	28318141	28418612	28368376	ENSG00000257869.1	+	lincRNA	KNOWN	CTD-2591A6.2	1	3	-0.549890
chr14	28489910	28490362	28490136	ENSG00000240179.1	+	processed_pseudogene	KNOWN	RPL26P3	1	1	-0.349012
chr14	28592223	28613623	28602923	ENSG00000258175.1	-	lincRNA	KNOWN	RP11-412H8.2	1	3	-0.524542
chr14	28593779	28593919	28593849	ENSG00000257662.1	+	processed_pseudogene	KNOWN	EIF4A1P12	1	1	-0.519443
chr14	28673241	28673727	28673484	ENSG00000258282.2	-	processed_pseudogene	KNOWN	BTF3P2	1	1	-0.519938
chr14	28729083	28765277	28747180	ENSG00000257126.5	-	antisense	KNOWN	FOXG1-AS1	3	5	-0.462200
chr14	28765388	28770277	28767832	ENSG00000176165.9	+	protein_coding	KNOWN	FOXG1	1	1	0.022694
chr14	28772704	28813453	28793078	ENSG00000186960.10	+	lincRNA	KNOWN	LINC01551	4	4	-0.184369
chr14	28783491	28785787	28784639	ENSG00000257056.2	-	lincRNA	KNOWN	RP11-966I7.2	1	2	0.001480
chr14	28800084	28830204	28815144	ENSG00000257748.1	-	lincRNA	KNOWN	RP11-966I7.3	1	4	-0.287683
chr14	28818741	28819258	28818999	ENSG00000274762.1	+	antisense	KNOWN	RP11-966I7.4	1	1	-0.261187
chr14	28830244	28968400	28899322	ENSG00000258038.5	+	lincRNA	KNOWN	CTD-2384A14.1	6	6	-0.605562
chr14	28857384	28858701	28858042	ENSG00000258065.1	-	processed_pseudogene	KNOWN	RP11-30H9.1	1	1	-0.394836
chr14	28901236	28901347	28901291	ENSG00000207164.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.622387
chr14	28936889	29028763	28982826	ENSG00000258028.1	+	lincRNA	KNOWN	RP11-148E17.1	1	6	-0.508895
chr14	28975836	28978924	28977380	ENSG00000257523.1	-	lincRNA	KNOWN	CTD-2384A14.2	1	3	-0.263770
chr14	28982303	28982410	28982356	ENSG00000252065.1	-	snRNA	KNOWN	RNU6-864P	1	1	-0.263770
chr14	29059754	29059848	29059801	ENSG00000281812.1	-	miRNA	NOVEL	AL135878.1	1	1	-0.772353
chr14	29264381	29381295	29322838	ENSG00000257522.5	-	processed_transcript	KNOWN	RP11-562L8.1	5	6	-0.485051
chr14	29390346	29436412	29413379	ENSG00000258107.1	+	lincRNA	KNOWN	RP11-260G13.1	1	4	-0.381819
chr14	29476784	29476912	29476848	ENSG00000212518.1	+	snRNA	KNOWN	RNU11-5P	1	1	-0.549554
chr14	29576479	30191898	29884188	ENSG00000184304.14	-	protein_coding	KNOWN	PRKD1	9	19	-0.183535
chr14	29652809	29657916	29655362	ENSG00000257120.1	+	antisense	KNOWN	CTD-2503I6.1	1	2	-0.232137
chr14	29705299	29705402	29705350	ENSG00000264797.1	-	miRNA	NOVEL	AL356756.1	1	1	-0.232206
chr14	29811916	29812018	29811967	ENSG00000252686.1	+	snRNA	KNOWN	RNU6-1234P	1	1	0.002355
chr14	29940745	29980212	29960478	ENSG00000257904.1	+	antisense	KNOWN	RP11-269C4.2	1	5	-0.194304
chr14	29952397	30297043	30124720	ENSG00000248975.2	-	lincRNA	KNOWN	CTD-2251F13.1	3	4	-0.190709
chr14	30055210	30055954	30055582	ENSG00000240201.1	+	processed_pseudogene	KNOWN	RP11-269C4.1	1	1	-0.032815
chr14	30370108	30373115	30371611	ENSG00000279032.1	+	TEC	KNOWN	RP11-306B9.1	1	1	-0.254566
chr14	30437992	30573629	30505810	ENSG00000257636.6	-	antisense	KNOWN	RP11-1103G16.1	4	6	-0.311463
chr14	30519161	30519318	30519239	ENSG00000278587.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.603154
chr14	30541776	30542188	30541982	ENSG00000258350.1	-	processed_pseudogene	KNOWN	SYF2P1	1	1	-0.243611
chr14	30559123	30620063	30589593	ENSG00000092140.14	+	protein_coding	KNOWN	G2E3	14	15	-0.285901
chr14	30622112	30735812	30678962	ENSG00000092108.20	+	protein_coding	KNOWN	SCFD1	24	25	-0.078800
chr14	30683045	30683598	30683321	ENSG00000258648.1	-	processed_pseudogene	KNOWN	UBE2CP1	1	1	-0.171043
chr14	30734926	30822702	30778814	ENSG00000258558.1	-	antisense	KNOWN	RP11-159L20.2	1	3	-0.132524
chr14	30791098	30791489	30791293	ENSG00000243855.1	+	processed_pseudogene	KNOWN	RPL12P5	1	1	-0.528816
chr14	30819714	30819914	30819814	ENSG00000240513.1	+	processed_pseudogene	KNOWN	RP11-829H16.1	1	1	-0.429545
chr14	30821419	30821843	30821631	ENSG00000213867.4	+	processed_pseudogene	KNOWN	RP11-829H16.2	1	1	-0.429545
chr14	30874514	30895065	30884789	ENSG00000100473.15	+	protein_coding	KNOWN	COCH	11	12	0.119390
chr14	30876179	30889808	30882993	ENSG00000258525.1	-	antisense	KNOWN	RP11-829H16.3	4	5	0.228680
chr14	30893799	31026401	30960100	ENSG00000196792.11	-	protein_coding	KNOWN	STRN3	8	18	0.033388
chr14	30964347	30964622	30964484	ENSG00000258886.2	+	processed_pseudogene	KNOWN	HIGD1AP17	1	1	-0.131730
chr14	31014646	31014742	31014694	ENSG00000207952.1	-	miRNA	KNOWN	MIR624	1	1	0.304295
chr14	31018446	31018796	31018621	ENSG00000258968.2	+	processed_pseudogene	KNOWN	RP11-829H16.5	1	1	0.304295
chr14	31025106	31096450	31060778	ENSG00000100478.14	+	protein_coding	KNOWN	AP4S1	12	7	0.220730
chr14	31100112	31207804	31153958	ENSG00000092148.12	-	protein_coding	KNOWN	HECTD1	19	45	0.322657
chr14	31111569	31112239	31111904	ENSG00000258640.3	-	processed_pseudogene	KNOWN	RPL21P5	1	2	0.480262
chr14	31142939	31143048	31142993	ENSG00000207440.1	+	snRNA	KNOWN	RNU6-541P	1	1	0.009055
chr14	31244761	31244861	31244811	ENSG00000202402.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.323317
chr14	31248628	31302739	31275683	ENSG00000257831.1	+	antisense	KNOWN	RP11-596D21.1	1	6	0.336141
chr14	31258608	31258709	31258658	ENSG00000199291.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.198907
chr14	31291791	31420582	31356186	ENSG00000129493.14	-	protein_coding	KNOWN	HEATR5A	9	36	0.171967
chr14	31320224	31320634	31320429	ENSG00000283016.1	-	processed_pseudogene	KNOWN	RP11-176H8.3	1	1	-0.036650
chr14	31334312	31457441	31395876	ENSG00000203546.7	-	protein_coding	KNOWN	RP11-176H8.1	3	25	0.163518
chr14	31420286	31452883	31436584	ENSG00000250365.6	+	antisense	KNOWN	CTD-2213F21.2	3	4	0.190581
chr14	31446036	31457510	31451773	ENSG00000129480.12	-	protein_coding	KNOWN	DTD2	3	5	-0.016524
chr14	31462795	31463371	31463083	ENSG00000239323.1	-	processed_pseudogene	KNOWN	CTD-2213F21.1	1	1	-0.166160
chr14	31482964	31487945	31485454	ENSG00000214943.3	-	protein_coding	KNOWN	GPR33	1	2	0.058633
chr14	31489956	31861224	31675590	ENSG00000151413.16	+	protein_coding	KNOWN	NUBPL	13	11	-0.121542
chr14	31553358	31558498	31555928	ENSG00000258196.1	-	antisense	KNOWN	CTD-2213F21.4	1	3	0.166954
chr14	31558507	31561334	31559920	ENSG00000257155.1	-	antisense	KNOWN	CTD-2213F21.3	1	2	0.166954
chr14	31662039	31662143	31662091	ENSG00000223087.2	-	snRNA	KNOWN	RNU6-602P	1	1	-0.079054
chr14	31686692	31686798	31686745	ENSG00000207412.1	-	snRNA	KNOWN	RNU6-455P	1	1	-0.012117
chr14	31925801	31930146	31927973	ENSG00000257472.1	-	lincRNA	KNOWN	RP11-159D23.2	1	2	0.092264
chr14	31944853	31950382	31947617	ENSG00000258474.1	+	lincRNA	KNOWN	RP11-187E13.1	1	2	0.115714
chr14	31964550	31965095	31964822	ENSG00000275002.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-187E13.3	2	1	0.326457
chr14	32006902	32018685	32012793	ENSG00000258386.1	+	lincRNA	KNOWN	RP11-187E13.2	1	2	0.244310
chr14	32074946	32076793	32075869	ENSG00000258655.2	-	antisense	KNOWN	ARHGAP5-AS1	1	1	0.037199
chr14	32076114	32159728	32117921	ENSG00000100852.12	+	protein_coding	KNOWN	ARHGAP5	11	11	-0.030347
chr14	32202045	32202151	32202098	ENSG00000201654.1	+	snRNA	KNOWN	RNU6-7	1	1	0.036850
chr14	32203163	32203269	32203216	ENSG00000202337.1	-	snRNA	KNOWN	RNU6-8	1	1	0.036850
chr14	32241524	32243093	32242308	ENSG00000258619.2	-	processed_pseudogene	KNOWN	RP11-134E15.1	1	1	0.151188
chr14	32271857	32272301	32272079	ENSG00000259086.3	-	processed_pseudogene	KNOWN	RP11-134E15.2	1	1	0.027861
chr14	32329273	32837681	32583477	ENSG00000151320.10	+	protein_coding	KNOWN	AKAP6	15	14	-0.076294
chr14	32373337	32417974	32395655	ENSG00000258580.1	-	antisense	KNOWN	RP11-320M16.2	2	4	0.102538
chr14	32442341	32442639	32442490	ENSG00000278746.1	+	misc_RNA	KNOWN	RN7SL660P	1	1	0.171960
chr14	32484098	32484800	32484449	ENSG00000259045.1	-	unprocessed_pseudogene	KNOWN	MTCO1P2	1	1	0.040153
chr14	32484915	32484991	32484953	ENSG00000277394.1	-	miRNA	NOVEL	AL132988.1	1	1	0.040153
chr14	32879246	32882830	32881038	ENSG00000280281.1	+	TEC	KNOWN	RP11-340L3.1	1	1	-0.424584
chr14	32934933	33804176	33369554	ENSG00000151322.18	+	protein_coding	KNOWN	NPAS3	13	12	-0.402813
chr14	33200164	33200260	33200212	ENSG00000276444.1	-	miRNA	NOVEL	AL139296.1	1	1	-0.511210
chr14	33924231	34462774	34193502	ENSG00000129521.13	-	protein_coding	KNOWN	EGLN3	11	6	-0.172164
chr14	33977310	33977391	33977350	ENSG00000265244.1	-	miRNA	NOVEL	AL358340.1	1	1	-0.311801
chr14	34040097	34059300	34049698	ENSG00000258897.1	+	antisense	KNOWN	EGLN3-AS1	1	3	-0.172981
chr14	34416687	34417602	34417144	ENSG00000223593.1	-	processed_pseudogene	KNOWN	AL356806.3	1	1	-0.111292
chr14	34432789	34462356	34447572	ENSG00000165389.6	-	protein_coding	KNOWN	SPTSSA	1	2	0.137727
chr14	34485979	34486447	34486213	ENSG00000237450.5	+	processed_pseudogene	KNOWN	RPL23AP71	1	1	0.153392
chr14	34515929	34539711	34527820	ENSG00000129518.8	-	protein_coding	KNOWN	EAPP	5	10	0.280341
chr14	34541044	34541714	34541379	ENSG00000279423.1	+	TEC	KNOWN	RP11-671J11.5	1	1	0.083818
chr14	34541740	34546329	34544034	ENSG00000259002.2	-	lincRNA	KNOWN	RP11-671J11.7	2	3	0.083818
chr14	34546714	34546877	34546795	ENSG00000206596.1	+	snRNA	KNOWN	RNU1-27P	1	1	0.083818
chr14	34556226	34556389	34556307	ENSG00000206588.1	-	snRNA	KNOWN	RNU1-28P	1	1	0.633961
chr14	34556774	34561298	34559036	ENSG00000259135.1	+	antisense	KNOWN	RP11-671J11.4	2	3	0.633961
chr14	34561094	34630183	34595638	ENSG00000129515.18	-	protein_coding	KNOWN	SNX6	10	15	0.568303
chr14	34568689	34569129	34568909	ENSG00000240463.1	-	processed_pseudogene	KNOWN	RPS19P3	1	1	0.633961
chr14	34659564	34659878	34659721	ENSG00000275978.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.537680
chr14	34675891	34675994	34675942	ENSG00000253003.1	+	snRNA	KNOWN	RNU6-1261P	1	1	0.399420
chr14	34694170	34694644	34694407	ENSG00000241582.1	+	processed_pseudogene	KNOWN	RPL23AP8	1	1	0.021982
chr14	34706769	34714823	34710796	ENSG00000165410.14	-	protein_coding	KNOWN	CFL2	6	4	0.113306
chr14	34740336	34740833	34740584	ENSG00000243824.1	-	processed_pseudogene	KNOWN	RPL12P6	1	1	0.562998
chr14	34752731	34875647	34814189	ENSG00000198604.10	-	protein_coding	KNOWN	BAZ1A	12	27	0.157545
chr14	34801531	34801585	34801558	ENSG00000263691.1	-	miRNA	NOVEL	AL355885.1	1	1	0.257482
chr14	34845300	34845360	34845330	ENSG00000251726.1	-	snRNA	KNOWN	RNU7-41P	1	1	-0.021390
chr14	34874343	34876459	34875401	ENSG00000258738.1	+	antisense	KNOWN	RP11-73E17.2	1	1	0.379794
chr14	34920858	34982532	34951695	ENSG00000258704.5	-	processed_transcript	KNOWN	SRP54-AS1	4	6	0.281014
chr14	34920865	34921006	34920935	ENSG00000258493.2	+	processed_pseudogene	KNOWN	RP11-73E17.3	1	1	0.405150
chr14	34939324	34940332	34939828	ENSG00000226677.3	+	processed_pseudogene	KNOWN	IGBP1P1	1	1	0.509354
chr14	34981957	35029567	35005762	ENSG00000100883.11	+	protein_coding	KNOWN	SRP54	14	17	0.254498
chr14	35044907	35113130	35079018	ENSG00000151327.12	+	protein_coding	KNOWN	FAM177A1	11	7	0.265524
chr14	35085467	35122517	35103992	ENSG00000092020.10	-	protein_coding	KNOWN	PPP2R3C	20	13	0.178260
chr14	35086035	35088059	35087047	ENSG00000279434.1	+	TEC	KNOWN	RP11-85K15.3	1	1	0.134056
chr14	35121846	35277614	35199730	ENSG00000100890.15	+	protein_coding	KNOWN	KIAA0391	11	8	0.196805
chr14	35122549	35317474	35220011	ENSG00000258790.1	+	protein_coding	KNOWN	RP11-561B11.2	1	15	0.247332
chr14	35144021	35144480	35144250	ENSG00000241052.1	-	processed_pseudogene	KNOWN	RPL23AP70	1	1	0.469227
chr14	35157904	35159099	35158501	ENSG00000259090.1	-	processed_pseudogene	KNOWN	SEPT7P1	1	1	0.234792
chr14	35219023	35219283	35219153	ENSG00000282625.1	-	processed_pseudogene	KNOWN	MRPL57P8	1	1	0.195943
chr14	35222174	35222746	35222460	ENSG00000282308.1	+	processed_pseudogene	KNOWN	DPRXP3	1	1	0.195943
chr14	35235180	35235651	35235415	ENSG00000256243.2	-	processed_pseudogene	KNOWN	RPL7AP3	1	1	-0.089615
chr14	35262462	35263036	35262749	ENSG00000240392.1	+	processed_pseudogene	KNOWN	RPL9P3	1	1	0.246569
chr14	35278633	35317493	35298063	ENSG00000100902.10	+	protein_coding	KNOWN	PSMA6	17	7	0.446803
chr14	35291486	35291576	35291531	ENSG00000265530.1	+	miRNA	NOVEL	AL121594.1	1	1	0.557045
chr14	35362232	35363628	35362930	ENSG00000258860.1	-	lincRNA	KNOWN	RP11-561B11.3	1	2	0.555491
chr14	35388121	35389069	35388595	ENSG00000240023.1	-	processed_pseudogene	KNOWN	RP11-561B11.1	1	1	0.794498
chr14	35401511	35404749	35403130	ENSG00000100906.10	-	protein_coding	KNOWN	NFKBIA	10	6	0.696283
chr14	35430260	35430631	35430445	ENSG00000259022.2	+	processed_pseudogene	KNOWN	DNAJC8P1	1	1	0.123527
chr14	35447003	35447625	35447314	ENSG00000259017.1	-	lincRNA	KNOWN	RP11-561B11.6	1	2	0.123527
chr14	35468272	35469330	35468801	ENSG00000259105.1	+	processed_pseudogene	KNOWN	RPS3AP4	1	2	-0.138621
chr14	35511825	35513089	35512457	ENSG00000258783.1	-	processed_pseudogene	KNOWN	KRT18P6	1	1	-0.295031
chr14	35534042	35537054	35535548	ENSG00000168348.3	+	protein_coding	KNOWN	INSM2	1	1	-0.181027
chr14	35538352	35809304	35673828	ENSG00000174373.15	-	protein_coding	KNOWN	RALGAPA1	18	42	-0.262981
chr14	35576760	35576859	35576809	ENSG00000280729.1	-	miRNA	NOVEL	AL160231.1	1	1	-0.219048
chr14	35756327	35756463	35756395	ENSG00000253059.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.273005
chr14	35765795	35767110	35766452	ENSG00000257957.1	+	processed_pseudogene	KNOWN	QRSL1P3	1	1	-0.273005
chr14	35809212	35809300	35809256	ENSG00000266264.1	-	miRNA	NOVEL	AL162311.1	1	1	0.196328
chr14	35819224	35826765	35822994	ENSG00000258938.1	-	antisense	KNOWN	RP11-317N8.5	1	2	0.083580
chr14	35819837	35820220	35820028	ENSG00000258300.2	+	processed_pseudogene	KNOWN	NUTF2P2	1	1	0.083580
chr14	35826318	35932325	35879321	ENSG00000100916.13	+	protein_coding	KNOWN	BRMS1L	6	11	-0.100880
chr14	35873857	35875303	35874580	ENSG00000257272.1	+	lincRNA	KNOWN	RP11-317N8.3	1	2	0.037544
chr14	35881001	35881709	35881355	ENSG00000257307.1	+	processed_pseudogene	KNOWN	RP11-317N8.4	1	1	0.037544
chr14	35897982	36063743	35980862	ENSG00000258342.1	+	sense_overlapping	KNOWN	RP11-116N8.1	1	4	-0.238551
chr14	35947556	35950044	35948800	ENSG00000257614.1	-	lincRNA	KNOWN	RP11-116N8.2	1	2	-0.307342
chr14	36054197	36055313	36054755	ENSG00000257720.1	-	processed_pseudogene	KNOWN	ILF2P2	1	1	-0.504286
chr14	36061026	36067190	36064108	ENSG00000257826.1	-	lincRNA	KNOWN	RP11-116N8.4	1	3	-0.504286
chr14	36070427	36165288	36117857	ENSG00000257585.1	+	lincRNA	KNOWN	LINC00609	1	3	-0.366440
chr14	36136108	36176468	36156288	ENSG00000259104.2	-	lincRNA	KNOWN	PTCSC3	1	4	-0.342347
chr14	36196480	36196568	36196524	ENSG00000212071.1	-	miRNA	NOVEL	AL162511.1	1	1	-0.353952
chr14	36214607	36235608	36225107	ENSG00000258844.1	+	lincRNA	KNOWN	RP11-259K15.2	1	3	-0.396517
chr14	36231555	36231774	36231664	ENSG00000252312.1	-	misc_RNA	KNOWN	RN7SKP21	1	1	-0.292438
chr14	36298558	36320676	36309617	ENSG00000151332.18	-	protein_coding	KNOWN	MBIP	11	10	-0.307520
chr14	36320753	36656163	36488458	ENSG00000283098.1	+	bidirectional_promoter_lncrna	KNOWN	RP11-964E11.3	1	4	-0.317675
chr14	36371165	36372383	36371774	ENSG00000188831.4	+	transcribed_unprocessed_pseudogene	KNOWN	DPPA3P2	2	1	-0.530641
chr14	36405214	36405274	36405244	ENSG00000238540.1	+	snRNA	KNOWN	RNU7-93P	1	1	-0.459023
chr14	36473207	36519521	36496364	ENSG00000257520.1	-	processed_transcript	KNOWN	RP11-896J10.3	1	5	-0.279290
chr14	36473288	36513829	36493558	ENSG00000229415.9	-	protein_coding	KNOWN	SFTA3	9	6	-0.327803
chr14	36516392	36521149	36518770	ENSG00000136352.17	-	protein_coding	KNOWN	NKX2-1	5	4	0.066606
chr14	36519278	36523016	36521147	ENSG00000253563.2	+	antisense	KNOWN	NKX2-1-AS1	1	2	0.066606
chr14	36533506	36534538	36534022	ENSG00000258467.1	-	unprocessed_pseudogene	KNOWN	PHKBP2	1	2	0.035408
chr14	36577543	36578005	36577774	ENSG00000243730.2	-	processed_pseudogene	KNOWN	RPL29P3	1	1	-0.341358
chr14	36580579	36582607	36581593	ENSG00000136327.6	-	protein_coding	KNOWN	NKX2-8	1	2	-0.341358
chr14	36593839	36594147	36593993	ENSG00000201395.1	-	misc_RNA	KNOWN	RN7SKP257	1	1	-0.149016
chr14	36647083	36658801	36652942	ENSG00000258661.1	-	antisense	KNOWN	RP11-964E11.2	1	2	0.047585
chr14	36657568	36679715	36668641	ENSG00000198807.12	+	protein_coding	KNOWN	PAX9	6	5	0.173626
chr14	36677921	37172866	36925393	ENSG00000183032.10	-	protein_coding	KNOWN	SLC25A21	6	11	-0.234787
chr14	36788644	36807163	36797903	ENSG00000258690.1	+	antisense	KNOWN	RP11-81F13.1	1	2	-0.633802
chr14	36808871	36828729	36818800	ENSG00000258601.1	+	antisense	KNOWN	RP11-81F13.2	1	2	-0.448875
chr14	36952309	36952391	36952350	ENSG00000266327.1	-	miRNA	KNOWN	MIR4503	1	1	0.101330
chr14	37097062	37098563	37097812	ENSG00000258827.2	-	sense_intronic	KNOWN	RP11-537P22.2	1	2	-0.260797
chr14	37171888	37173811	37172849	ENSG00000258708.1	+	antisense	KNOWN	SLC25A21-AS1	1	1	0.101270
chr14	37187219	37187314	37187266	ENSG00000252746.1	+	snRNA	KNOWN	RNU6-273P	1	1	0.101270
chr14	37197913	37552361	37375137	ENSG00000151338.18	+	protein_coding	KNOWN	MIPOL1	15	16	-0.346281
chr14	37434469	37434573	37434521	ENSG00000207046.1	-	snRNA	KNOWN	RNU6-886P	1	1	-0.391525
chr14	37556158	37567095	37561626	ENSG00000259087.5	-	lincRNA	KNOWN	RP11-356O9.2	2	2	0.091992
chr14	37564047	37579125	37571586	ENSG00000258414.1	+	lincRNA	KNOWN	RP11-356O9.1	1	2	0.153001
chr14	37589984	37596059	37593021	ENSG00000129514.5	-	protein_coding	KNOWN	FOXA1	5	3	0.256645
chr14	37595847	38041442	37818644	ENSG00000139865.16	+	protein_coding	KNOWN	TTC6	10	31	-0.220965
chr14	37720425	37720561	37720493	ENSG00000200385.1	+	snoRNA	NOVEL	SNORA42	1	1	-0.542923
chr14	37827798	37827904	37827851	ENSG00000201431.1	-	snRNA	KNOWN	RNU6-1277P	1	1	-0.242427
chr14	37896060	37902372	37899216	ENSG00000259091.1	-	antisense	KNOWN	LINC00517	2	2	-0.335429
chr14	38003113	38004847	38003980	ENSG00000258696.1	-	antisense	KNOWN	CTD-2058B24.3	1	2	0.036035
chr14	38034287	38194281	38114284	ENSG00000259048.1	-	antisense	KNOWN	CTD-2058B24.2	2	5	-0.067036
chr14	38190983	38202923	38196953	ENSG00000258649.1	+	lincRNA	KNOWN	CTD-2142D14.1	1	3	0.083724
chr14	38207999	38213067	38210533	ENSG00000139874.5	+	protein_coding	KNOWN	SSTR1	1	3	0.224860
chr14	38254103	38256369	38255236	ENSG00000176435.6	-	protein_coding	KNOWN	CLEC14A	1	1	0.152292
chr14	38290953	38311930	38301441	ENSG00000259072.1	+	lincRNA	KNOWN	RP11-96D24.1	1	4	-0.018882
chr14	38605255	38606098	38605676	ENSG00000271468.1	+	processed_pseudogene	KNOWN	RP11-14N4.1	1	1	-0.492971
chr14	38727275	38728481	38727878	ENSG00000258948.2	+	processed_pseudogene	KNOWN	KRT8P1	1	1	-0.416473
chr14	38749339	38948273	38848806	ENSG00000259070.5	-	lincRNA	KNOWN	LINC00639	5	7	-0.304156
chr14	38835389	38835788	38835588	ENSG00000258680.2	+	processed_pseudogene	KNOWN	RP11-506K19.1	1	1	-0.245878
chr14	38973399	38974085	38973742	ENSG00000270713.1	-	processed_pseudogene	KNOWN	RP11-506K19.2	1	1	0.065357
chr14	38987281	38987383	38987332	ENSG00000199285.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.065357
chr14	39031919	39109646	39070782	ENSG00000100934.14	-	protein_coding	KNOWN	SEC23A	15	20	0.038967
chr14	39090901	39091101	39091001	ENSG00000259121.2	+	processed_pseudogene	KNOWN	RP11-545M17.2	1	1	0.322605
chr14	39103140	39103812	39103476	ENSG00000258651.1	+	lincRNA	KNOWN	RP11-545M17.1	1	2	0.322605
chr14	39108342	39108707	39108524	ENSG00000258591.2	+	processed_pseudogene	KNOWN	RP11-545M17.3	1	1	0.322605
chr14	39114223	39136973	39125598	ENSG00000092208.16	+	protein_coding	KNOWN	GEMIN2	12	11	0.278703
chr14	39147811	39170532	39159171	ENSG00000182400.14	-	protein_coding	KNOWN	TRAPPC6B	7	6	0.386022
chr14	39156742	39157852	39157297	ENSG00000241984.2	+	processed_pseudogene	KNOWN	RPL7AP2	1	2	0.399047
chr14	39174885	39175880	39175382	ENSG00000259083.1	-	antisense	KNOWN	RP11-407N17.4	1	2	0.971961
chr14	39175183	39183218	39179200	ENSG00000100941.8	+	protein_coding	KNOWN	PNN	6	9	0.971961
chr14	39211781	39212255	39212018	ENSG00000258671.2	+	processed_pseudogene	KNOWN	RP11-407N17.2	1	1	0.148575
chr14	39215065	39216335	39215700	ENSG00000270503.1	+	processed_pseudogene	KNOWN	YTHDF2P1	1	1	0.148575
chr14	39230231	39253655	39241943	ENSG00000150526.11	+	protein_coding	KNOWN	MIA2	4	6	0.108979
chr14	39233902	39350423	39292162	ENSG00000258941.3	+	protein_coding	KNOWN	RP11-407N17.3	1	28	0.075025
chr14	39265284	39388513	39326898	ENSG00000150527.16	+	protein_coding	KNOWN	CTAGE5	14	24	-0.017148
chr14	39265703	39267061	39266382	ENSG00000258940.2	-	antisense	KNOWN	RP11-407N17.5	2	2	0.243110
chr14	39370279	39370756	39370517	ENSG00000271424.1	-	processed_pseudogene	KNOWN	RP11-647O20.1	1	1	0.047323
chr14	39385404	39387102	39386253	ENSG00000259100.1	-	processed_pseudogene	KNOWN	RP11-1074O12.1	1	1	0.047323
chr14	39397669	39432500	39415084	ENSG00000165355.7	-	protein_coding	KNOWN	FBXO33	3	4	-0.034136
chr14	39474840	39513780	39494310	ENSG00000258526.5	+	lincRNA	KNOWN	RP11-111A21.1	3	3	-0.201749
chr14	40386252	40386794	40386523	ENSG00000258418.1	+	lincRNA	KNOWN	RP11-662J14.1	1	2	-0.751039
chr14	40387558	40389140	40388349	ENSG00000258480.1	+	lincRNA	KNOWN	RP11-662J14.2	1	2	-0.751039
chr14	40954898	40975877	40965387	ENSG00000251363.2	+	lincRNA	KNOWN	RP11-129M6.1	1	4	-0.638930
chr14	41296286	41298734	41297510	ENSG00000258385.1	+	processed_pseudogene	KNOWN	RP11-629F19.1	1	1	-0.767831
chr14	41349294	41349367	41349330	ENSG00000221695.1	+	miRNA	NOVEL	AL390335.1	1	1	-0.268184
chr14	41514972	41515350	41515161	ENSG00000279972.1	-	TEC	KNOWN	RP11-354G16.1	1	1	-0.371182
chr14	41555662	41556055	41555858	ENSG00000258901.2	-	processed_pseudogene	KNOWN	CTD-2298J14.1	1	1	-0.497220
chr14	41587861	41604856	41596358	ENSG00000258636.1	-	lincRNA	KNOWN	CTD-2298J14.2	1	2	-0.582243
chr14	41594463	41594591	41594527	ENSG00000251858.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.545438
chr14	41607570	41904549	41756059	ENSG00000165379.13	+	protein_coding	KNOWN	LRFN5	5	7	-0.588966
chr14	41742639	41742963	41742801	ENSG00000258536.1	+	processed_pseudogene	KNOWN	RP11-1053O12.1	1	1	-0.757766
chr14	41952476	41952560	41952518	ENSG00000266500.1	+	miRNA	NOVEL	AL138498.1	1	1	-0.498024
chr14	42259731	42268586	42264158	ENSG00000259149.1	-	lincRNA	KNOWN	RP11-313C4.1	1	2	-0.444509
chr14	42300751	42300862	42300806	ENSG00000222084.1	+	miRNA	NOVEL	AL445074.1	1	1	-0.357811
chr14	42362983	42703655	42533319	ENSG00000258394.1	+	sense_overlapping	KNOWN	CTD-2307P3.1	1	4	-0.636954
chr14	42412573	42528888	42470730	ENSG00000258850.1	+	lincRNA	KNOWN	RP11-214N1.1	1	2	-0.584110
chr14	42608868	42609577	42609222	ENSG00000258505.1	+	transcribed_processed_pseudogene	KNOWN	RP11-90P16.1	1	1	-0.595540
chr14	42657763	42657918	42657840	ENSG00000258622.2	-	processed_pseudogene	KNOWN	RP11-90P16.2	1	1	-0.609568
chr14	42807378	42808112	42807745	ENSG00000258934.1	-	processed_pseudogene	KNOWN	RP11-97N10.1	1	1	-0.776097
chr14	42989201	42989483	42989342	ENSG00000259047.1	+	processed_pseudogene	KNOWN	RP11-16O13.1	1	1	-0.264152
chr14	43274824	43275697	43275260	ENSG00000258406.1	+	processed_pseudogene	KNOWN	RP11-88E18.1	1	1	-0.556297
chr14	43300263	43300595	43300429	ENSG00000259051.1	+	processed_pseudogene	KNOWN	HNRNPUP1	1	1	-0.795114
chr14	43540883	43541826	43541354	ENSG00000258828.2	-	processed_pseudogene	KNOWN	KRT8P2	1	1	-0.591535
chr14	43592142	43592262	43592202	ENSG00000258387.1	-	processed_pseudogene	KNOWN	RP11-557C9.3	1	1	-0.407579
chr14	43595136	43596683	43595909	ENSG00000258894.1	+	processed_pseudogene	KNOWN	RP11-557C9.1	1	1	-0.407579
chr14	43995781	44384545	44190163	ENSG00000258969.1	-	lincRNA	KNOWN	RP11-305B6.3	1	3	-0.541852
chr14	44077534	44077884	44077709	ENSG00000259019.1	-	transcribed_processed_pseudogene	KNOWN	EIF4BP1	1	1	-0.529497
chr14	44120210	44120761	44120485	ENSG00000259137.1	-	processed_pseudogene	KNOWN	RP11-305B6.1	1	1	-0.610464
chr14	44290997	44291718	44291357	ENSG00000259148.1	-	processed_pseudogene	KNOWN	RP11-322L17.1	1	1	-0.846021
chr14	44392531	44393716	44393123	ENSG00000259126.1	-	lincRNA	KNOWN	RP11-99L13.2	2	2	-0.501238
chr14	44394175	44394265	44394220	ENSG00000277472.1	-	miRNA	NOVEL	AL161752.1	1	1	-0.501238
chr14	44444747	44480618	44462682	ENSG00000258487.1	-	lincRNA	KNOWN	RP11-99L13.1	2	4	-0.205691
chr14	44504342	44507279	44505810	ENSG00000189139.5	-	protein_coding	KNOWN	FSCB	1	1	-0.540276
chr14	44507407	44538513	44522960	ENSG00000258747.1	+	antisense	KNOWN	RP11-163M18.1	3	3	-0.571314
chr14	44763157	44782829	44772993	ENSG00000258998.1	-	lincRNA	KNOWN	RP11-398E10.1	1	4	-0.542399
chr14	44860316	44866247	44863281	ENSG00000259000.1	-	processed_pseudogene	KNOWN	DOCK11P1	1	1	-0.042309
chr14	44876874	44897077	44886975	ENSG00000258633.1	-	antisense	KNOWN	RP11-857B24.1	1	2	-0.386966
chr14	44887434	44887741	44887587	ENSG00000258509.1	-	processed_pseudogene	KNOWN	RP11-857B24.3	1	1	-0.568072
chr14	44888556	44889041	44888798	ENSG00000259046.1	-	processed_pseudogene	KNOWN	RP11-857B24.2	1	1	-0.568072
chr14	44897295	44907257	44902276	ENSG00000179476.7	+	protein_coding	KNOWN	C14orf28	4	5	-0.051133
chr14	44898908	44911863	44905385	ENSG00000258949.1	-	antisense	KNOWN	RP11-857B24.5	1	3	-0.077461
chr14	44924319	45042322	44983320	ENSG00000179454.13	-	protein_coding	KNOWN	KLHL28	7	5	-0.159073
chr14	44962208	45074431	45018319	ENSG00000198718.12	+	protein_coding	KNOWN	FAM179B	10	20	-0.119954
chr14	45079849	45080189	45080019	ENSG00000278147.1	+	lincRNA	KNOWN	CTD-3028N15.3	1	1	0.119473
chr14	45083045	45083977	45083511	ENSG00000249163.3	-	antisense	KNOWN	CTD-3028N15.1	1	2	0.119473
chr14	45084099	45116282	45100190	ENSG00000185246.17	+	protein_coding	KNOWN	PRPF39	12	16	0.063768
chr14	45088243	45088308	45088275	ENSG00000212615.1	+	snoRNA	NOVEL	SNORD58	1	1	0.119473
chr14	45110883	45110968	45110925	ENSG00000239043.1	+	snoRNA	KNOWN	SNORD127	1	1	-0.051918
chr14	45115600	45135319	45125459	ENSG00000100442.10	-	protein_coding	KNOWN	FKBP3	4	8	-0.037358
chr14	45135940	45200890	45168415	ENSG00000187790.10	+	protein_coding	KNOWN	FANCM	10	23	-0.097340
chr14	45203190	45253540	45228365	ENSG00000129534.13	-	protein_coding	KNOWN	MIS18BP1	12	17	-0.172606
chr14	45274359	45274477	45274418	ENSG00000199739.1	-	snRNA	KNOWN	RNU6-552P	1	1	-0.195705
chr14	45290036	45290386	45290211	ENSG00000258608.1	+	processed_pseudogene	KNOWN	DNAJC19P9	1	1	-0.325676
chr14	45369215	45370839	45370027	ENSG00000260046.1	+	lincRNA	KNOWN	RP11-454K7.3	1	1	-0.464254
chr14	45377268	45389286	45383277	ENSG00000257900.2	+	lincRNA	KNOWN	RP11-454K7.1	1	2	-0.513729
chr14	45502742	45503140	45502941	ENSG00000258746.2	-	processed_pseudogene	KNOWN	RP11-454K7.2	1	1	-0.281626
chr14	45567995	45569069	45568532	ENSG00000258845.1	+	lincRNA	KNOWN	RP11-945F5.1	1	2	-0.185303
chr14	45706250	45715952	45711101	ENSG00000258616.5	-	lincRNA	KNOWN	RP11-369C8.1	5	3	-0.501745
chr14	45816143	45816229	45816186	ENSG00000264420.1	-	miRNA	NOVEL	AL158111.1	1	1	-0.214435
chr14	45940943	46501823	46221383	ENSG00000258700.5	+	lincRNA	KNOWN	LINC00871	4	6	-0.630075
chr14	46651010	46651821	46651415	ENSG00000165496.4	-	protein_coding	KNOWN	RPL10L	1	1	-0.402368
chr14	46839629	47674954	47257291	ENSG00000139915.18	-	protein_coding	KNOWN	MDGA2	10	17	-0.564676
chr14	46960423	46960546	46960484	ENSG00000251735.1	+	snoRNA	NOVEL	SNORA25	1	1	-0.537825
chr14	46996454	46997174	46996814	ENSG00000258392.1	+	processed_pseudogene	KNOWN	RPA2P1	1	1	-0.246533
chr14	47200575	47201104	47200839	ENSG00000244053.1	-	processed_pseudogene	KNOWN	RPL13AP2	1	1	-1.008809
chr14	47444106	47444494	47444300	ENSG00000214903.4	-	processed_pseudogene	KNOWN	RPS15AP3	1	1	-0.606352
chr14	47540522	47540580	47540551	ENSG00000281262.1	+	miRNA	NOVEL	AL079306.1	1	1	-0.269516
chr14	47760995	47761104	47761049	ENSG00000263945.1	-	miRNA	KNOWN	MIR548Y	1	1	-0.751283
chr14	47764954	47795092	47780023	ENSG00000259129.5	-	lincRNA	KNOWN	LINC00648	4	4	-0.610879
chr14	47801926	47802201	47802063	ENSG00000259117.1	-	processed_pseudogene	KNOWN	RP11-476J6.1	1	1	-0.728784
chr14	48045481	48046216	48045848	ENSG00000258639.1	+	processed_pseudogene	KNOWN	RP11-10A2.1	1	2	-0.715363
chr14	48319068	48319394	48319231	ENSG00000270359.1	-	processed_pseudogene	KNOWN	RP11-2G1.3	1	1	-0.978398
chr14	48341226	48341332	48341279	ENSG00000207366.1	-	snRNA	KNOWN	RNU6-297P	1	1	-0.630899
chr14	48396508	48491767	48444137	ENSG00000258751.1	-	lincRNA	KNOWN	RP11-2G1.1	1	6	-0.496110
chr14	48398310	48399375	48398842	ENSG00000258750.2	+	processed_pseudogene	KNOWN	RP11-2G1.2	1	1	-0.471144
chr14	48489883	48490434	48490158	ENSG00000242417.1	+	processed_pseudogene	KNOWN	RP11-286B5.1	1	1	-0.694410
chr14	48493933	48494064	48493998	ENSG00000251731.1	-	miRNA	NOVEL	AL512359.1	1	1	-0.678526
chr14	48819360	48819593	48819476	ENSG00000258381.1	+	processed_pseudogene	KNOWN	RP11-737F10.1	1	1	-0.743889
chr14	49057713	49077505	49067609	ENSG00000258868.1	-	lincRNA	KNOWN	RP11-816J8.1	1	4	-0.372950
chr14	49373966	49374383	49374174	ENSG00000258401.1	+	processed_pseudogene	KNOWN	RP11-326E7.1	1	1	-0.207568
chr14	49552633	49552748	49552690	ENSG00000252424.1	+	rRNA	KNOWN	RNA5SP384	1	1	-0.282404
chr14	49570984	49599164	49585074	ENSG00000213741.8	-	protein_coding	KNOWN	RPS29	9	3	0.035863
chr14	49577392	49577794	49577593	ENSG00000244270.1	-	processed_pseudogene	KNOWN	RPL32P29	1	1	-0.144448
chr14	49586579	49586878	49586728	ENSG00000283029.1	+	non_coding	KNOWN	RN7SL1	1	1	-0.144448
chr14	49586580	49586878	49586729	ENSG00000276168.1	+	misc_RNA	KNOWN	RN7SL1	1	1	-0.144448
chr14	49586722	49586791	49586756	ENSG00000281893.1	+	miRNA	NOVEL	AL139099.3	1	1	-0.144448
chr14	49586803	49586882	49586842	ENSG00000281255.1	+	miRNA	NOVEL	AL139099.2	1	1	-0.144448
chr14	49592236	49592337	49592286	ENSG00000252919.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.409962
chr14	49598697	49614672	49606684	ENSG00000165501.16	+	protein_coding	KNOWN	LRR1	5	6	0.369175
chr14	49599994	49600572	49600283	ENSG00000258568.1	+	processed_pseudogene	KNOWN	RHOQP1	1	1	0.409962
chr14	49601011	49601124	49601067	ENSG00000278009.1	-	unprocessed_pseudogene	KNOWN	RP11-649E7.8	1	1	0.409962
chr14	49618519	49620685	49619602	ENSG00000165502.6	-	protein_coding	KNOWN	RPL36AL	1	2	0.270530
chr14	49620795	49623481	49622138	ENSG00000168282.5	+	protein_coding	KNOWN	MGAT2	1	1	0.270530
chr14	49620815	49623480	49622147	ENSG00000258377.1	-	antisense	KNOWN	RP11-649E7.5	1	2	0.270530
chr14	49625174	49635230	49630202	ENSG00000165506.14	-	protein_coding	KNOWN	DNAAF2	2	3	0.371150
chr14	49629291	49629890	49629590	ENSG00000258450.1	-	sense_intronic	KNOWN	RP11-649E7.7	1	2	0.270530
chr14	49635000	49635077	49635038	ENSG00000275425.1	+	miRNA	NOVEL	AL139099.1	1	1	0.463961
chr14	49643555	49688422	49665988	ENSG00000100479.12	-	protein_coding	KNOWN	POLE2	11	19	0.245734
chr14	49677369	49677893	49677631	ENSG00000259155.2	+	processed_pseudogene	KNOWN	RP11-831F12.3	1	1	0.032753
chr14	49681302	49681886	49681594	ENSG00000258462.2	+	processed_pseudogene	KNOWN	RP11-831F12.4	1	2	0.032753
chr14	49684544	49684665	49684604	ENSG00000221114.1	+	snRNA	KNOWN	RNU6ATAC30P	1	1	0.032753
chr14	49693105	49753152	49723128	ENSG00000197776.7	+	protein_coding	KNOWN	KLHDC1	6	13	0.015624
chr14	49707667	49708792	49708229	ENSG00000258400.1	-	antisense	KNOWN	RP11-831F12.2	1	2	0.159896
chr14	49767608	49786385	49776996	ENSG00000165516.10	+	protein_coding	KNOWN	KLHDC2	11	13	0.384341
chr14	49782083	49853203	49817643	ENSG00000165525.17	-	protein_coding	KNOWN	NEMF	15	33	0.195325
chr14	49839401	49839493	49839447	ENSG00000277634.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.108768
chr14	49839725	49839827	49839776	ENSG00000252474.1	+	snRNA	KNOWN	RNU6-539P	1	1	0.108768
chr14	49853616	49853914	49853765	ENSG00000278771.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.345440
chr14	49853703	49853772	49853737	ENSG00000279868.2	-	miRNA	KNOWN	RN7SL3	1	1	0.345440
chr14	49861176	49864326	49862751	ENSG00000282885.1	-	lincRNA	KNOWN	RP11-596C23.6	2	4	0.345440
chr14	49862547	49862626	49862586	ENSG00000280102.2	-	miRNA	KNOWN	RN7SL2	1	1	0.345440
chr14	49862550	49862849	49862699	ENSG00000274012.1	-	misc_RNA	KNOWN	Metazoa_SRP	1	1	0.345440
chr14	49862638	49862707	49862672	ENSG00000280602.1	-	miRNA	NOVEL	AL627171.1	1	1	0.345440
chr14	49863072	49864379	49863725	ENSG00000278002.1	+	lincRNA	KNOWN	RP11-596C23.2	1	1	0.345440
chr14	49893092	49897054	49895073	ENSG00000165527.6	+	protein_coding	KNOWN	ARF6	1	2	0.481494
chr14	49901850	49901950	49901900	ENSG00000251929.1	-	snRNA	KNOWN	RNU6-189P	1	1	0.481494
chr14	49913493	49913760	49913626	ENSG00000274704.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.727078
chr14	49927571	50092643	50010107	ENSG00000214900.9	-	lincRNA	KNOWN	LINC01588	17	12	0.432373
chr14	49966399	49966511	49966455	ENSG00000278038.1	+	miRNA	KNOWN	MIR6076	1	1	0.625907
chr14	50050368	50051336	50050852	ENSG00000270788.1	+	processed_pseudogene	KNOWN	PDLIM1P1	1	1	0.512835
chr14	50052857	50053569	50053213	ENSG00000243038.1	+	processed_pseudogene	KNOWN	RP11-58E21.1	1	1	0.512835
chr14	50068568	50068873	50068720	ENSG00000201358.1	+	misc_RNA	KNOWN	RN7SKP193	1	1	0.512835
chr14	50086982	50087083	50087032	ENSG00000251792.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.301663
chr14	50108632	50116600	50112616	ENSG00000100483.13	-	protein_coding	KNOWN	VCPKMT	5	6	0.190904
chr14	50117120	50231558	50174339	ENSG00000100485.11	-	protein_coding	KNOWN	SOS2	6	23	0.126482
chr14	50237563	50312548	50275055	ENSG00000087299.11	-	protein_coding	KNOWN	L2HGDH	7	11	0.099388
chr14	50299850	50299962	50299906	ENSG00000264712.2	-	miRNA	KNOWN	MIR4504	1	1	0.240315
chr14	50312326	50335558	50323942	ENSG00000125375.14	+	protein_coding	KNOWN	ATP5S	11	6	0.161448
chr14	50326526	50327909	50327217	ENSG00000259071.1	-	lincRNA	KNOWN	RP11-247L20.4	1	2	0.131305
chr14	50329404	50416461	50372932	ENSG00000100490.9	-	protein_coding	KNOWN	CDKL1	11	20	0.279841
chr14	50397013	50398345	50397679	ENSG00000258857.1	+	lincRNA	KNOWN	RP11-247L20.3	1	3	0.439915
chr14	50418501	50561126	50489813	ENSG00000012983.11	-	protein_coding	KNOWN	MAP4K5	10	32	0.043291
chr14	50448807	50456742	50452774	ENSG00000259113.1	+	lincRNA	KNOWN	RP11-406H23.2	1	2	0.084457
chr14	50468397	50468498	50468447	ENSG00000201573.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.100925
chr14	50471769	50472592	50472180	ENSG00000273675.1	+	processed_pseudogene	KNOWN	RP11-406H23.5	1	1	-0.212342
chr14	50532509	50633068	50582788	ENSG00000198513.11	+	protein_coding	KNOWN	ATL1	10	14	0.023261
chr14	50571919	50572140	50572029	ENSG00000258577.1	-	processed_pseudogene	KNOWN	SNRPGP1	1	1	-0.091315
chr14	50632058	50668331	50650194	ENSG00000151748.14	-	protein_coding	KNOWN	SAV1	6	5	-0.165733
chr14	50637691	50637981	50637836	ENSG00000243103.3	-	misc_RNA	KNOWN	RN7SL452P	1	1	-0.077933
chr14	50662511	50663178	50662844	ENSG00000269906.1	-	sense_intronic	KNOWN	RP11-248J18.2	1	1	-0.251661
chr14	50704343	50705511	50704927	ENSG00000258491.2	-	processed_pseudogene	KNOWN	ZFP64P1	1	1	0.153067
chr14	50719763	50831121	50775442	ENSG00000100503.23	-	protein_coding	KNOWN	NIN	18	32	0.059522
chr14	50723777	50724272	50724024	ENSG00000270062.1	-	sense_intronic	KNOWN	RP11-248J18.3	1	1	0.091992
chr14	50821880	50823501	50822690	ENSG00000258843.1	+	antisense	KNOWN	RP11-286O18.1	1	2	-0.034226
chr14	50844625	50844712	50844668	ENSG00000252945.1	+	snoRNA	NOVEL	snoU83B	1	1	0.413920
chr14	50848122	50865659	50856890	ENSG00000258687.1	+	antisense	KNOWN	RP11-218E20.2	1	2	0.340035
chr14	50857891	50944736	50901313	ENSG00000100504.16	-	protein_coding	KNOWN	PYGL	7	20	0.075673
chr14	50872160	50904970	50888565	ENSG00000131969.14	+	protein_coding	KNOWN	ABHD12B	9	13	0.088752
chr14	50912226	50913358	50912792	ENSG00000258745.1	+	antisense	KNOWN	RP11-218E20.5	1	2	-0.186473
chr14	50956259	50962002	50959130	ENSG00000258711.2	-	lincRNA	KNOWN	RP11-218E20.3	1	2	0.324283
chr14	50975262	51096061	51035661	ENSG00000100505.13	-	protein_coding	KNOWN	TRIM9	6	12	-0.144988
chr14	51088957	51091288	51090122	ENSG00000259055.1	+	antisense	KNOWN	RP11-1140I5.1	1	3	-0.263118
chr14	51240162	51257546	51248854	ENSG00000139921.12	+	protein_coding	KNOWN	TMX1	3	8	-0.078807
chr14	51244090	51244224	51244157	ENSG00000201376.1	+	snoRNA	NOVEL	SNORA70	1	1	0.005056
chr14	51253933	51254023	51253978	ENSG00000201820.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.188116
chr14	51304416	51328386	51316401	ENSG00000258955.1	-	lincRNA	KNOWN	LINC00519	1	2	0.196180
chr14	51333393	51365557	51349475	ENSG00000258479.5	+	lincRNA	KNOWN	LINC00640	4	5	0.041667
chr14	51344914	51385603	51365258	ENSG00000258942.1	-	lincRNA	KNOWN	RP11-255G12.2	1	4	0.263777
chr14	51392128	51397135	51394631	ENSG00000258808.1	-	lincRNA	KNOWN	RP11-255G12.3	1	4	0.227344
chr14	51436038	51436963	51436500	ENSG00000258893.1	+	processed_pseudogene	KNOWN	SETP2	1	1	0.148260
chr14	51454512	51599952	51527232	ENSG00000258537.5	-	lincRNA	KNOWN	FRMD6-AS2	2	4	0.146994
chr14	51489100	51730727	51609913	ENSG00000139926.15	+	protein_coding	KNOWN	FRMD6	18	15	0.156852
chr14	51522864	51522967	51522915	ENSG00000252400.1	+	snRNA	KNOWN	RNU6-1291P	1	1	0.340905
chr14	51637348	51637947	51637647	ENSG00000277050.1	-	antisense	KNOWN	RP11-102G14.1	1	1	0.154388
chr14	51649516	51651744	51650630	ENSG00000273888.1	-	antisense	KNOWN	FRMD6-AS1	1	1	0.533932
chr14	51692752	51692861	51692806	ENSG00000251756.1	+	rRNA	KNOWN	RNA5SP385	1	1	0.149707
chr14	51724103	51724209	51724156	ENSG00000207004.1	+	snRNA	KNOWN	RNU6-301P	1	1	0.091992
chr14	51750560	51763114	51756837	ENSG00000259111.1	+	lincRNA	KNOWN	RP11-280K24.1	1	3	0.234011
chr14	51756996	51757988	51757492	ENSG00000258423.1	+	unprocessed_pseudogene	KNOWN	OR7E105P	1	1	0.234011
chr14	51763056	51764076	51763566	ENSG00000258550.1	-	unprocessed_pseudogene	KNOWN	OR7E106P	1	1	0.234011
chr14	51765276	51825422	51795349	ENSG00000258535.1	+	sense_overlapping	KNOWN	RP11-280K24.4	1	10	-0.027379
chr14	51771789	51772086	51771937	ENSG00000258849.1	-	unprocessed_pseudogene	KNOWN	OR7E159P	1	1	0.182407
chr14	51787461	51787743	51787602	ENSG00000259157.1	+	unprocessed_pseudogene	KNOWN	RP11-280K24.6	1	1	0.182407
chr14	51826195	51979342	51902768	ENSG00000186469.8	+	protein_coding	KNOWN	GNG2	16	7	-0.146292
chr14	51916145	51918571	51917358	ENSG00000258928.1	-	antisense	KNOWN	RP11-463J10.2	1	3	-0.293298
chr14	51967003	51969800	51968401	ENSG00000259007.1	-	antisense	KNOWN	RP11-463J10.3	1	2	-0.129035
chr14	51982520	51987219	51984869	ENSG00000258854.1	-	antisense	KNOWN	RP11-463J10.4	1	2	-0.213716
chr14	51989475	52010691	52000083	ENSG00000087302.8	+	protein_coding	KNOWN	C14orf166	7	8	-0.228326
chr14	52004803	52069228	52037015	ENSG00000087303.16	-	protein_coding	KNOWN	NID2	9	26	0.255385
chr14	52111122	52129625	52120373	ENSG00000258694.1	-	lincRNA	KNOWN	RP11-1033H12.1	1	3	-0.061921
chr14	52117602	52117995	52117798	ENSG00000258981.1	+	processed_pseudogene	KNOWN	COX5AP2	1	1	-0.061921
chr14	52155740	52156179	52155959	ENSG00000258440.1	+	processed_pseudogene	KNOWN	RP11-1033H12.3	1	1	-0.177615
chr14	52267713	52276724	52272218	ENSG00000168229.3	+	protein_coding	KNOWN	PTGDR	2	3	-0.085850
chr14	52286797	52289268	52288032	ENSG00000261208.1	+	processed_pseudogene	KNOWN	RP11-452D12.1	1	3	0.048664
chr14	52314305	52328606	52321455	ENSG00000125384.6	+	protein_coding	KNOWN	PTGER2	2	3	-0.006498
chr14	52430590	52552522	52491556	ENSG00000087301.8	-	protein_coding	KNOWN	TXNDC16	4	21	-0.368806
chr14	52553148	52637713	52595430	ENSG00000180998.11	+	protein_coding	KNOWN	GPR137C	4	8	-0.333101
chr14	52639916	52695900	52667908	ENSG00000197930.12	-	protein_coding	KNOWN	ERO1A	11	16	-0.297514
chr14	52640839	52641566	52641202	ENSG00000258757.1	+	antisense	KNOWN	RP11-841O20.2	1	2	-0.435520
chr14	52707172	52728587	52717879	ENSG00000100519.11	+	protein_coding	KNOWN	PSMC6	19	14	0.295899
chr14	52730180	52774998	52752589	ENSG00000198252.11	+	protein_coding	KNOWN	STYX	3	12	0.125939
chr14	52775194	52791668	52783431	ENSG00000100522.8	-	protein_coding	KNOWN	GNPNAT1	5	7	-0.116346
chr14	52775237	52777740	52776488	ENSG00000259049.1	+	antisense	KNOWN	RP11-589M4.1	2	2	-0.130401
chr14	52792875	52820034	52806454	ENSG00000258698.1	-	lincRNA	KNOWN	RP11-589M4.3	1	2	-0.046493
chr14	52798904	52799061	52798982	ENSG00000258802.1	-	processed_pseudogene	KNOWN	RP11-589M4.2	1	1	0.008334
chr14	52857268	52952435	52904851	ENSG00000073712.14	-	protein_coding	KNOWN	FERMT2	15	16	0.236671
chr14	52871458	52872217	52871837	ENSG00000271075.1	+	processed_pseudogene	KNOWN	RP11-589M4.4	1	1	0.173063
chr14	53011971	53012267	53012119	ENSG00000258503.1	+	processed_pseudogene	KNOWN	RP11-368P15.1	1	1	0.062992
chr14	53023055	53023597	53023326	ENSG00000258993.1	+	processed_pseudogene	KNOWN	RP11-368P15.2	1	2	0.062992
chr14	53036745	53153282	53095013	ENSG00000100523.14	-	protein_coding	KNOWN	DDHD1	10	14	-0.070615
chr14	53036755	53038251	53037503	ENSG00000258985.1	+	antisense	KNOWN	RP11-368P15.3	1	2	0.155417
chr14	53153049	53153115	53153082	ENSG00000266552.1	-	miRNA	NOVEL	AL356020.1	1	1	0.109586
chr14	53153354	53157528	53155441	ENSG00000258731.1	+	antisense	KNOWN	RP11-547D23.1	1	3	0.109586
chr14	53169054	53687258	53428156	ENSG00000237356.5	+	processed_transcript	KNOWN	AL163953.3	5	4	-0.139155
chr14	53599832	53614026	53606929	ENSG00000225680.1	-	lincRNA	KNOWN	AL163953.2	1	2	-0.244068
chr14	53612724	53613405	53613064	ENSG00000226132.1	+	processed_pseudogene	KNOWN	RPS3AP46	1	1	0.167280
chr14	53768942	53850882	53809912	ENSG00000235269.1	-	lincRNA	KNOWN	AL162759.1	1	4	-0.264013
chr14	53917270	53917753	53917511	ENSG00000231922.1	-	processed_pseudogene	KNOWN	AL138479.3	1	1	-0.002786
chr14	53948427	53948484	53948455	ENSG00000266431.1	-	miRNA	KNOWN	MIR5580	1	1	0.052025
chr14	53949736	53958761	53954248	ENSG00000125378.15	-	protein_coding	KNOWN	BMP4	9	4	0.484645
chr14	53991101	53991995	53991548	ENSG00000224004.2	-	processed_pseudogene	KNOWN	ATP5C1P1	1	1	0.054517
chr14	54396849	54420218	54408533	ENSG00000100526.19	+	protein_coding	KNOWN	CDKN3	12	9	0.130513
chr14	54423560	54441431	54432495	ENSG00000100528.11	-	protein_coding	KNOWN	CNIH1	7	6	0.043992
chr14	54470709	54471218	54470963	ENSG00000258753.1	+	lincRNA	KNOWN	RP11-794A8.1	1	2	0.127181
chr14	54474484	54489196	54481840	ENSG00000197045.12	-	protein_coding	KNOWN	GMFB	10	8	0.127181
chr14	54509812	54539309	54524560	ENSG00000100532.11	+	protein_coding	KNOWN	CGRRF1	9	6	0.024633
chr14	54567097	54793315	54680206	ENSG00000020577.13	+	protein_coding	KNOWN	SAMD4A	13	13	0.240610
chr14	54641608	54641705	54641656	ENSG00000274983.1	-	miRNA	NOVEL	AL138994.1	1	1	0.133571
chr14	54842008	54902852	54872430	ENSG00000131979.18	-	protein_coding	KNOWN	GCH1	7	7	0.081194
chr14	54859215	54859330	54859272	ENSG00000252019.1	+	snRNA	KNOWN	RNU6ATAC9P	1	1	-0.083580
chr14	54878113	54878193	54878153	ENSG00000265432.1	-	miRNA	KNOWN	MIR4308	1	1	0.193871
chr14	54884849	54886213	54885531	ENSG00000258872.2	-	transcribed_processed_pseudogene	KNOWN	FDPSP3	1	2	0.193871
chr14	54938950	55027105	54983027	ENSG00000198554.11	-	protein_coding	KNOWN	WDHD1	5	26	0.039528
chr14	55004813	55005687	55005250	ENSG00000233924.1	-	processed_pseudogene	KNOWN	RPSAP13	1	1	0.217523
chr14	55027230	55049488	55038359	ENSG00000180008.8	+	protein_coding	KNOWN	SOCS4	4	3	0.190544
chr14	55051631	55070192	55060911	ENSG00000168175.14	+	protein_coding	KNOWN	MAPK1IP1L	5	5	0.149399
chr14	55124110	55145413	55134761	ENSG00000131981.15	+	protein_coding	KNOWN	LGALS3	7	6	0.695369
chr14	55148112	55191678	55169895	ENSG00000126787.12	-	protein_coding	KNOWN	DLGAP5	5	20	-0.034966
chr14	55196727	55199013	55197870	ENSG00000258050.2	-	lincRNA	KNOWN	RP11-698F20.3	1	2	0.076138
chr14	55229217	55229681	55229449	ENSG00000279392.1	+	processed_pseudogene	KNOWN	RP11-665C16.9	1	1	-0.255932
chr14	55240622	55241080	55240851	ENSG00000271180.1	-	processed_pseudogene	KNOWN	RP11-665C16.8	1	1	-0.116955
chr14	55262767	55272075	55267421	ENSG00000258413.1	-	lincRNA	KNOWN	RP11-665C16.6	2	2	0.204954
chr14	55271303	55361918	55316610	ENSG00000178974.9	+	protein_coding	KNOWN	FBXO34	6	5	0.066486
chr14	55282296	55282643	55282469	ENSG00000239686.1	-	processed_pseudogene	KNOWN	RP11-665C16.1	1	1	-0.130401
chr14	55285227	55285558	55285392	ENSG00000278818.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.130401
chr14	55298644	55299231	55298937	ENSG00000258469.1	+	processed_pseudogene	KNOWN	CHMP4BP1	1	1	0.176384
chr14	55325834	55339501	55332667	ENSG00000258455.1	-	antisense	KNOWN	RP11-665C16.5	1	3	0.099853
chr14	55366392	55411858	55389125	ENSG00000126775.8	-	protein_coding	KNOWN	ATG14	2	10	0.334438
chr14	55394940	55395233	55395086	ENSG00000259318.1	-	processed_pseudogene	KNOWN	RP11-454L9.2	1	1	0.281470
chr14	55413541	55456726	55435133	ENSG00000182521.5	-	protein_coding	KNOWN	TBPL2	2	7	-0.030613
chr14	55413556	55414059	55413807	ENSG00000239199.1	-	processed_pseudogene	KNOWN	RPL21P6	1	1	-0.097351
chr14	55499278	55580110	55539694	ENSG00000186615.10	-	antisense	KNOWN	KTN1-AS1	4	4	-0.029387
chr14	55543401	55544169	55543785	ENSG00000213641.4	+	processed_pseudogene	KNOWN	RPL7AP4	1	1	0.074070
chr14	55546674	55548123	55547398	ENSG00000271484.1	+	unprocessed_pseudogene	KNOWN	RP11-132J14.3	1	2	0.074070
chr14	55559072	55701526	55630299	ENSG00000126777.17	+	protein_coding	KNOWN	KTN1	25	46	-0.091713
chr14	55651534	55651634	55651584	ENSG00000200742.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.173247
chr14	55748208	55773203	55760705	ENSG00000258784.1	+	lincRNA	KNOWN	RP11-813I20.2	1	4	-0.066775
chr14	55766177	55767717	55766947	ENSG00000177350.6	+	transcribed_processed_pseudogene	KNOWN	RPL13AP3	2	1	-0.024732
chr14	55781135	55796688	55788911	ENSG00000258791.7	-	lincRNA	KNOWN	LINC00520	6	4	-0.188868
chr14	55896547	55962970	55929758	ENSG00000259868.2	+	processed_transcript	KNOWN	RP11-1012E15.2	2	7	-0.284258
chr14	56075480	56075566	56075523	ENSG00000221254.2	+	miRNA	NOVEL	AL163952.1	1	1	-0.257342
chr14	56117316	56117990	56117653	ENSG00000277763.1	-	lincRNA	KNOWN	CTD-2588E21.1	1	1	-0.041864
chr14	56117814	56301526	56209670	ENSG00000139946.9	+	protein_coding	KNOWN	PELI2	3	6	-0.007913
chr14	56303490	56310761	56307125	ENSG00000259483.1	-	lincRNA	KNOWN	RP11-930O11.2	1	4	0.087017
chr14	56305838	56306394	56306116	ENSG00000275569.1	+	antisense	KNOWN	RP11-930O11.3	1	1	0.125544
chr14	56310880	56345001	56327940	ENSG00000259719.5	+	lincRNA	KNOWN	RP11-930O11.1	2	5	-0.126450
chr14	56488354	56650606	56569480	ENSG00000070269.13	+	protein_coding	KNOWN	TMEM260	16	16	-0.295993
chr14	56514331	56551309	56532820	ENSG00000258803.1	+	lincRNA	KNOWN	RP11-624J12.1	1	2	-0.435909
chr14	56633244	56648658	56640951	ENSG00000258428.5	-	antisense	KNOWN	RP11-1085N6.2	2	3	-0.221425
chr14	56648965	56730535	56689750	ENSG00000259133.5	-	antisense	KNOWN	RP11-1085N6.3	2	3	-0.198444
chr14	56683421	56683741	56683581	ENSG00000242995.1	-	processed_pseudogene	KNOWN	RP11-1085N6.1	1	1	-0.101689
chr14	56759379	56765757	56762568	ENSG00000258703.1	+	lincRNA	KNOWN	RP11-1085N6.4	1	2	-0.473912
chr14	56781728	56781837	56781782	ENSG00000276389.1	+	miRNA	NOVEL	AL161757.1	1	1	-0.454957
chr14	56799905	56810479	56805192	ENSG00000165588.16	-	protein_coding	KNOWN	OTX2	7	6	-0.096857
chr14	56813183	57152177	56982680	ENSG00000248550.3	+	lincRNA	KNOWN	OTX2-AS1	4	4	-0.416295
chr14	56817570	56893710	56855640	ENSG00000258776.1	-	lincRNA	KNOWN	RP11-1085N6.5	4	3	-0.310275
chr14	56824375	56824656	56824515	ENSG00000243801.3	-	misc_RNA	KNOWN	RN7SL461P	1	1	-0.473605
chr14	56824986	56825092	56825039	ENSG00000200818.1	+	snRNA	KNOWN	RNU6-1204P	1	1	-0.473605
chr14	56978409	56979621	56979015	ENSG00000243388.1	+	processed_pseudogene	KNOWN	RPL3P3	1	1	-0.435255
chr14	57040885	57042504	57041694	ENSG00000258758.1	+	processed_pseudogene	KNOWN	RP11-613G13.1	1	1	-0.396627
chr14	57044646	57044960	57044803	ENSG00000259136.1	-	processed_pseudogene	KNOWN	RP11-108M12.2	1	1	-0.396627
chr14	57066260	57112660	57089460	ENSG00000258592.1	-	lincRNA	KNOWN	RP11-108M12.3	2	3	-0.408057
chr14	57200507	57269008	57234757	ENSG00000070367.15	-	protein_coding	KNOWN	EXOC5	11	20	-0.281969
chr14	57268909	57298742	57283825	ENSG00000053770.11	+	protein_coding	KNOWN	AP5M1	9	9	-0.140742
chr14	57355446	57359410	57357428	ENSG00000259008.1	+	lincRNA	KNOWN	RP11-932A10.1	1	1	-0.287245
chr14	57390544	57415917	57403230	ENSG00000139977.13	+	protein_coding	KNOWN	NAA30	4	5	-0.299928
chr14	57469301	57493867	57481584	ENSG00000100557.9	-	protein_coding	KNOWN	C14orf105	11	7	-0.261656
chr14	57563922	57982194	57773058	ENSG00000151812.14	-	protein_coding	KNOWN	SLC35F4	8	10	-0.406024
chr14	57578632	57581320	57579976	ENSG00000259039.1	+	antisense	KNOWN	RP11-409I10.2	1	2	-0.430686
chr14	57629841	57631162	57630501	ENSG00000258856.2	+	transcribed_processed_pseudogene	KNOWN	CTD-2325K12.1	2	1	-0.628401
chr14	57837354	57837660	57837507	ENSG00000252837.1	-	misc_RNA	KNOWN	RN7SKP99	1	1	-0.090662
chr14	57993545	57994525	57994035	ENSG00000259969.1	-	sense_overlapping	KNOWN	RP11-999E24.3	1	1	-0.351927
chr14	57999735	58298139	58148937	ENSG00000139971.15	-	protein_coding	KNOWN	C14orf37	6	8	-0.148781
chr14	58100985	58101574	58101279	ENSG00000258836.2	+	processed_pseudogene	KNOWN	RP11-349A22.2	1	1	-0.128979
chr14	58141279	58141660	58141469	ENSG00000243023.2	+	processed_pseudogene	KNOWN	UBA52P3	1	1	-0.076046
chr14	58179771	58180064	58179917	ENSG00000243700.3	+	misc_RNA	KNOWN	RN7SL598P	1	1	-0.120312
chr14	58184576	58185507	58185041	ENSG00000258519.1	+	processed_pseudogene	KNOWN	RP11-349A22.3	1	2	-0.120312
chr14	58200080	58235636	58217858	ENSG00000131966.13	+	protein_coding	KNOWN	ACTR10	16	14	-0.050519
chr14	58244831	58272012	58258421	ENSG00000100567.12	+	protein_coding	KNOWN	PSMA3	13	11	0.213498
chr14	58264662	58269681	58267171	ENSG00000258682.1	+	sense_overlapping	KNOWN	CTD-2002H8.2	1	2	0.296350
chr14	58265365	58298134	58281749	ENSG00000257621.7	-	antisense	KNOWN	PSMA3-AS1	14	5	-0.075516
chr14	58284773	58285363	58285068	ENSG00000180189.10	+	processed_pseudogene	KNOWN	HMGB1P14	1	1	-0.276251
chr14	58288033	58289158	58288595	ENSG00000279636.2	+	lincRNA	KNOWN	LINC00216	2	1	-0.276251
chr14	58292293	58292388	58292340	ENSG00000252782.1	-	snRNA	KNOWN	RNU6-341P	1	1	0.206163
chr14	58298385	58373887	58336136	ENSG00000032219.18	+	protein_coding	KNOWN	ARID4A	11	24	0.038741
chr14	58370023	58395641	58382832	ENSG00000258658.1	-	antisense	KNOWN	RP11-517O13.3	1	2	-0.144349
chr14	58395916	58408701	58402308	ENSG00000196860.7	+	protein_coding	KNOWN	TOMM20L	2	5	0.026403
chr14	58398557	58427125	58412841	ENSG00000258378.1	+	antisense	KNOWN	RP11-517O13.1	1	2	-0.129571
chr14	58408494	58427614	58418054	ENSG00000100575.13	-	protein_coding	KNOWN	TIMM9	10	6	-0.213298
chr14	58427385	58551289	58489337	ENSG00000100578.14	+	protein_coding	KNOWN	KIAA0586	15	34	-0.035148
chr14	58441844	58441992	58441918	ENSG00000252198.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.132864
chr14	58463971	58464136	58464053	ENSG00000258650.1	+	processed_pseudogene	KNOWN	HSBP1P1	1	1	-0.011386
chr14	58506587	58506695	58506641	ENSG00000278479.1	+	miRNA	NOVEL	AL139021.1	1	1	0.010564
chr14	58521223	58521988	58521605	ENSG00000258900.1	+	processed_pseudogene	KNOWN	HNRNPCP1	1	1	-0.094777
chr14	58564146	58564616	58564381	ENSG00000239510.2	+	processed_pseudogene	KNOWN	RPL9P5	1	1	0.163545
chr14	58633967	58648321	58641144	ENSG00000165617.14	+	protein_coding	KNOWN	DACT1	6	4	0.122049
chr14	58771152	58771246	58771199	ENSG00000221427.1	-	miRNA	NOVEL	AL121819.1	1	1	0.107422
chr14	58794654	58795029	58794841	ENSG00000213598.4	+	processed_pseudogene	KNOWN	RP11-112J1.1	1	1	0.210636
chr14	58827679	58828176	58827927	ENSG00000258734.2	-	processed_pseudogene	KNOWN	RP11-112J1.3	1	1	-0.134601
chr14	58828234	59017328	58922781	ENSG00000258583.5	+	lincRNA	KNOWN	LINC01500	4	6	0.054738
chr14	59135488	59136421	59135954	ENSG00000258685.2	-	processed_pseudogene	KNOWN	CTD-2315A10.2	1	1	-0.247214
chr14	59181593	59181940	59181766	ENSG00000258996.2	+	processed_pseudogene	KNOWN	CTD-2315A10.1	1	1	0.015820
chr14	59188646	59371405	59280025	ENSG00000100592.15	+	protein_coding	KNOWN	DAAM1	13	25	0.111158
chr14	59400023	59400151	59400087	ENSG00000252869.1	+	miRNA	NOVEL	AL159140.1	1	1	-0.255174
chr14	59429022	59465342	59447182	ENSG00000181619.11	-	protein_coding	KNOWN	GPR135	2	7	0.065626
chr14	59460363	59484430	59472396	ENSG00000126790.11	-	protein_coding	KNOWN	L3HYPDH	9	5	-0.106924
chr14	59479274	59525437	59502355	ENSG00000258782.3	-	processed_transcript	KNOWN	RP11-701B16.2	1	6	-0.080093
chr14	59484443	59505410	59494926	ENSG00000050130.17	+	protein_coding	KNOWN	JKAMP	15	8	0.063472
chr14	59504539	59576831	59540685	ENSG00000151838.11	-	protein_coding	KNOWN	CCDC175	5	20	-0.316027
chr14	59595976	59870966	59733471	ENSG00000139970.16	-	protein_coding	KNOWN	RTN1	9	10	-0.421787
chr14	59646962	59647020	59646991	ENSG00000263629.1	-	miRNA	KNOWN	MIR5586	1	1	-0.313647
chr14	59919423	59920339	59919881	ENSG00000261120.1	-	antisense	KNOWN	RP11-62H20.1	1	2	-0.380077
chr14	59919713	60063559	59991636	ENSG00000131951.10	+	protein_coding	KNOWN	LRRC9	6	33	-0.497334
chr14	59969116	60091783	60030449	ENSG00000258553.5	-	antisense	KNOWN	RP11-16B13.1	2	4	-0.482835
chr14	60091911	60169133	60130522	ENSG00000126773.12	+	protein_coding	KNOWN	PCNXL4	13	11	-0.145586
chr14	60144120	60169856	60156988	ENSG00000100612.13	-	protein_coding	KNOWN	DHRS7	12	8	0.057857
chr14	60158976	60159324	60159150	ENSG00000258896.1	+	processed_pseudogene	KNOWN	SCOCP1	1	1	0.212622
chr14	60179382	60180016	60179699	ENSG00000258563.2	+	processed_pseudogene	KNOWN	PSMA3P	1	1	-0.273802
chr14	60212462	60212912	60212687	ENSG00000242135.2	-	processed_pseudogene	KNOWN	RPL17P2	1	1	-0.358401
chr14	60240121	60248765	60244443	ENSG00000254718.6	-	antisense	KNOWN	CTD-2184C24.2	4	3	-0.715363
chr14	60245752	60299087	60272419	ENSG00000100614.17	+	protein_coding	KNOWN	PPM1A	8	7	-0.313453
chr14	60323236	60323907	60323571	ENSG00000258556.1	+	lincRNA	KNOWN	CTD-2568P8.1	1	2	-0.043785
chr14	60396469	60515543	60456006	ENSG00000179008.8	-	protein_coding	KNOWN	C14orf39	5	18	-0.595109
chr14	60397757	60398281	60398019	ENSG00000258427.3	+	processed_pseudogene	KNOWN	RBM8B	1	1	-0.338987
chr14	60398934	60400013	60399473	ENSG00000259169.1	-	unprocessed_pseudogene	KNOWN	GNRHR2P1	1	2	-0.338987
chr14	60493766	60496885	60495325	ENSG00000258692.2	-	transcribed_processed_pseudogene	KNOWN	SALL4P7	1	1	-0.725805
chr14	60508951	60512850	60510900	ENSG00000184302.6	+	protein_coding	KNOWN	SIX6	1	2	-0.363219
chr14	60515119	60554916	60535017	ENSG00000258670.1	+	antisense	KNOWN	RP11-1042B17.3	1	2	-0.206933
chr14	60544400	60544654	60544527	ENSG00000258764.1	+	transcribed_processed_pseudogene	KNOWN	RP11-1042B17.4	1	1	-0.104597
chr14	60572024	60572311	60572167	ENSG00000244756.1	-	processed_pseudogene	KNOWN	RP11-1042B17.1	1	1	-0.261187
chr14	60602146	60602533	60602339	ENSG00000241354.2	-	processed_pseudogene	KNOWN	RP11-1042B17.2	1	1	-0.562364
chr14	60639216	60642589	60640902	ENSG00000258952.2	+	lincRNA	KNOWN	SALRNA1	1	2	-0.072819
chr14	60643415	60658259	60650837	ENSG00000126778.8	-	protein_coding	KNOWN	SIX1	5	3	0.124997
chr14	60709528	60724348	60716938	ENSG00000100625.8	-	protein_coding	KNOWN	SIX4	3	4	0.197064
chr14	60734742	60969953	60852347	ENSG00000020426.10	+	protein_coding	KNOWN	MNAT1	9	8	-0.152913
chr14	60779978	60780595	60780286	ENSG00000258445.3	+	processed_pseudogene	KNOWN	RP11-307P22.1	1	1	0.038880
chr14	60879714	60982585	60931149	ENSG00000258892.1	+	processed_transcript	KNOWN	RP11-193F5.1	1	2	-0.176003
chr14	60919240	60920155	60919697	ENSG00000258485.2	-	processed_pseudogene	KNOWN	SRMP2	1	1	-0.020274
chr14	60971451	60981358	60976404	ENSG00000126814.6	-	protein_coding	KNOWN	TRMT5	3	5	-0.130401
chr14	60972272	60972466	60972369	ENSG00000258656.1	-	processed_pseudogene	KNOWN	RP11-193F5.4	1	1	-0.130401
chr14	60974327	60974435	60974381	ENSG00000206870.1	+	snRNA	KNOWN	RNU6-398P	1	1	-0.130401
chr14	60981114	61083733	61032423	ENSG00000139974.15	+	protein_coding	KNOWN	SLC38A6	20	21	-0.248300
chr14	61187559	61550976	61369267	ENSG00000027075.13	+	protein_coding	KNOWN	PRKCH	27	14	-0.035313
chr14	61277370	61281840	61279605	ENSG00000182107.6	-	protein_coding	KNOWN	TMEM30B	3	2	-0.050027
chr14	61298164	61322818	61310491	ENSG00000247287.2	-	antisense	KNOWN	RP11-902B17.1	2	3	-0.255253
chr14	61529128	61657964	61593546	ENSG00000258989.1	+	protein_coding	KNOWN	RP11-47I22.4	1	4	0.219094
chr14	61537508	61545287	61541397	ENSG00000258926.1	-	antisense	KNOWN	RP11-47I22.1	1	2	0.099486
chr14	61556313	61570653	61563483	ENSG00000250548.6	-	lincRNA	KNOWN	RP11-47I22.2	2	5	0.278615
chr14	61570540	61658696	61614618	ENSG00000232774.7	+	lincRNA	KNOWN	FLJ22447	3	5	0.233902
chr14	61681041	61695823	61688432	ENSG00000258777.1	-	lincRNA	KNOWN	HIF1A-AS1	1	2	0.124593
chr14	61695513	61748259	61721886	ENSG00000100644.16	+	protein_coding	KNOWN	HIF1A	12	15	-0.004935
chr14	61715558	61751097	61733327	ENSG00000258667.1	-	lincRNA	KNOWN	HIF1A-AS2	1	3	-0.040218
chr14	61734138	61776260	61755199	ENSG00000258964.1	+	processed_transcript	KNOWN	RP11-618G20.1	1	5	0.080588
chr14	61762357	61796428	61779392	ENSG00000023608.4	+	protein_coding	KNOWN	SNAPC1	1	10	0.019423
chr14	61801713	61803634	61802673	ENSG00000279633.1	+	TEC	KNOWN	RP11-442G21.2	1	1	-0.147474
chr14	61811974	61970319	61891146	ENSG00000258882.1	+	lincRNA	KNOWN	CTD-2277K2.1	2	3	-0.107306
chr14	61831861	61832369	61832115	ENSG00000258956.2	-	processed_pseudogene	KNOWN	COX4I1P1	1	1	-0.272772
chr14	61995823	62112550	62054186	ENSG00000139973.15	+	protein_coding	KNOWN	SYT16	3	7	-0.059678
chr14	62069518	62081154	62075336	ENSG00000258842.1	-	lincRNA	KNOWN	RP11-355I22.5	1	3	0.052360
chr14	62103378	62117175	62110276	ENSG00000258903.1	-	lincRNA	KNOWN	RP11-355I22.2	1	4	-0.223522
chr14	62114353	62130962	62122657	ENSG00000186369.9	+	lincRNA	KNOWN	LINC00643	6	4	-0.162710
chr14	62134149	62139973	62137061	ENSG00000259142.1	-	lincRNA	KNOWN	LINC00644	1	2	-0.119063
chr14	62150656	62152258	62151457	ENSG00000270852.1	-	unprocessed_pseudogene	KNOWN	RP11-355I22.8	1	2	-0.174947
chr14	62514872	62515123	62514997	ENSG00000258638.2	-	processed_pseudogene	KNOWN	RP11-395B20.2	1	1	-0.760904
chr14	62604113	62605717	62604915	ENSG00000258877.2	-	processed_pseudogene	KNOWN	ATP5A1P4	1	1	-0.808473
chr14	62699454	63102037	62900745	ENSG00000140015.19	-	protein_coding	KNOWN	KCNH5	4	11	-0.485122
chr14	63123007	63123201	63123104	ENSG00000258995.1	+	processed_pseudogene	KNOWN	RP11-1112J20.1	1	1	-0.279977
chr14	63123033	63128214	63125623	ENSG00000259093.1	-	lincRNA	KNOWN	RP11-1112J20.2	1	2	-0.279977
chr14	63204114	63293219	63248666	ENSG00000126785.12	+	protein_coding	KNOWN	RHOJ	4	5	-0.198752
chr14	63232715	63232812	63232763	ENSG00000265711.1	-	miRNA	NOVEL	AL049871.1	1	1	-0.320655
chr14	63298126	63299547	63298836	ENSG00000258943.1	-	lincRNA	KNOWN	RP11-696D21.2	1	2	-0.333099
chr14	63312835	63318879	63315857	ENSG00000179600.3	-	protein_coding	KNOWN	GPHB5	2	3	-0.142473
chr14	63371357	63543374	63457365	ENSG00000154001.13	-	protein_coding	KNOWN	PPP2R5E	7	14	-0.070128
chr14	63477774	63477839	63477806	ENSG00000281544.1	+	snRNA	NOVEL	U6	1	1	0.153392
chr14	63479272	63479413	63479342	ENSG00000252800.1	+	scaRNA	NOVEL	SCARNA20	1	1	0.153392
chr14	63543569	63544664	63544116	ENSG00000261242.1	+	antisense	KNOWN	CTD-2302E22.4	1	1	0.195085
chr14	63567958	63568308	63568133	ENSG00000205767.4	+	processed_pseudogene	KNOWN	CTD-2302E22.1	1	1	0.259833
chr14	63594031	63595291	63594661	ENSG00000270878.1	-	processed_pseudogene	KNOWN	CTD-2302E22.5	1	1	-0.083095
chr14	63597039	63641861	63619450	ENSG00000140006.11	-	protein_coding	KNOWN	WDR89	4	4	0.082280
chr14	63598874	63599248	63599061	ENSG00000258800.1	+	lincRNA	KNOWN	CTD-2302E22.2	1	2	-0.083095
chr14	63601509	63601814	63601661	ENSG00000258645.2	+	processed_pseudogene	KNOWN	HSPE1P2	1	1	-0.083095
chr14	63618043	63618144	63618093	ENSG00000202490.1	+	snRNA	KNOWN	RNU6-597P	1	1	0.055233
chr14	63621760	63621871	63621815	ENSG00000206822.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.055233
chr14	63630678	63630781	63630729	ENSG00000207172.1	+	snRNA	KNOWN	RNU6-1162P	1	1	0.308567
chr14	63642143	63642696	63642419	ENSG00000274015.1	+	lincRNA	KNOWN	CTD-2302E22.6	1	1	0.308567
chr14	63651296	63651499	63651397	ENSG00000200693.2	-	snoRNA	NOVEL	U3	1	1	0.235483
chr14	63684214	63728039	63706126	ENSG00000126821.7	-	protein_coding	KNOWN	SGPP1	1	3	0.059585
chr14	63734697	63735923	63735310	ENSG00000258778.2	+	processed_pseudogene	KNOWN	RP11-804M7.1	1	1	0.016264
chr14	63736444	63736505	63736474	ENSG00000252749.1	+	snRNA	KNOWN	RNU7-116P	1	1	0.016264
chr14	63762013	63762149	63762081	ENSG00000258411.2	+	processed_pseudogene	KNOWN	RP11-804M7.2	1	1	0.274195
chr14	63808546	63808732	63808639	ENSG00000270912.1	+	processed_pseudogene	KNOWN	RPS28P1	1	1	-0.063926
chr14	63848261	63848362	63848311	ENSG00000202182.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.027036
chr14	63852983	64226433	64039708	ENSG00000054654.15	+	protein_coding	KNOWN	SYNE2	29	116	0.006418
chr14	64084232	64338112	64211172	ENSG00000140009.18	-	protein_coding	KNOWN	ESR2	13	14	0.045409
chr14	64095024	64095125	64095074	ENSG00000221537.1	-	miRNA	KNOWN	MIR548H1	1	1	0.010920
chr14	64329431	64338599	64334015	ENSG00000214770.2	-	antisense	KNOWN	RP11-544I20.2	2	3	0.007162
chr14	64346171	64374666	64360418	ENSG00000234911.1	-	unitary_pseudogene	KNOWN	TEX21P	1	6	0.225133
chr14	64358768	64379318	64369043	ENSG00000258809.1	-	lincRNA	KNOWN	CTD-2555O16.1	1	4	0.236036
chr14	64361392	64361637	64361514	ENSG00000271511.1	+	processed_pseudogene	KNOWN	RP11-712C19.1	1	1	0.274369
chr14	64388031	64463457	64425744	ENSG00000100714.15	+	protein_coding	KNOWN	MTHFD1	16	28	0.390494
chr14	64422935	64448557	64435746	ENSG00000258824.2	-	antisense	KNOWN	CTD-2555O16.2	1	2	0.569673
chr14	64440369	64442238	64441303	ENSG00000272909.1	-	antisense	KNOWN	CTD-2555O16.4	1	1	0.635134
chr14	64449106	64505213	64477159	ENSG00000089775.11	-	protein_coding	KNOWN	ZBTB25	4	6	0.122918
chr14	64465499	64474503	64470001	ENSG00000179841.8	+	protein_coding	KNOWN	AKAP5	2	2	0.106438
chr14	64503712	64533690	64518701	ENSG00000126804.13	+	protein_coding	KNOWN	ZBTB1	6	4	0.198294
chr14	64514154	64540368	64527261	ENSG00000259116.1	-	antisense	KNOWN	RP11-973N13.4	1	4	0.225048
chr14	64535702	64535879	64535790	ENSG00000259160.1	-	processed_pseudogene	KNOWN	RP11-973N13.5	1	1	0.250895
chr14	64535905	64546173	64541039	ENSG00000126803.9	+	protein_coding	KNOWN	HSPA2	3	2	0.250895
chr14	64549902	64589380	64569641	ENSG00000165807.7	+	protein_coding	KNOWN	PPP1R36	6	13	0.252465
chr14	64552694	64596536	64574615	ENSG00000259076.1	-	antisense	KNOWN	RP11-973N13.3	2	3	0.241089
chr14	64600243	64601644	64600943	ENSG00000259010.1	-	processed_pseudogene	KNOWN	RP11-973N13.2	1	1	0.223589
chr14	64704102	64750247	64727174	ENSG00000126822.16	+	protein_coding	KNOWN	PLEKHG3	11	17	0.398661
chr14	64746283	64879883	64813083	ENSG00000070182.17	-	protein_coding	KNOWN	SPTB	8	36	0.471032
chr14	64785626	64785686	64785656	ENSG00000277239.1	-	miRNA	KNOWN	MIR7855	1	1	0.791184
chr14	64894339	64894713	64894526	ENSG00000279654.1	+	protein_coding	KNOWN	AL135745.1	1	1	-0.038856
chr14	64909488	64909780	64909634	ENSG00000252497.1	-	ribozyme	KNOWN	RPPH1-2P	1	1	-0.038856
chr14	64914361	64944591	64929476	ENSG00000258289.7	+	protein_coding	KNOWN	CHURC1	9	5	0.175658
chr14	64914485	65061803	64988144	ENSG00000125954.12	+	protein_coding	KNOWN	CHURC1-FNTB	4	14	0.228823
chr14	64939152	64942905	64941028	ENSG00000176153.11	-	protein_coding	KNOWN	GPX2	5	3	0.185101
chr14	64945814	64972776	64959295	ENSG00000139998.14	-	protein_coding	KNOWN	RAB15	6	7	0.324782
chr14	64986720	65062652	65024686	ENSG00000257365.7	+	protein_coding	KNOWN	FNTB	8	12	0.224538
chr14	65003325	65003767	65003546	ENSG00000272158.1	-	antisense	KNOWN	RP11-840I19.5	1	1	0.159807
chr14	65006174	65102695	65054434	ENSG00000125952.18	-	protein_coding	KNOWN	MAX	19	6	0.224230
chr14	65014715	65014814	65014764	ENSG00000264620.1	+	miRNA	NOVEL	AL139022.1	1	1	0.091992
chr14	65044688	65044769	65044728	ENSG00000266531.1	+	miRNA	KNOWN	MIR4706	1	1	0.426109
chr14	65082034	65094212	65088123	ENSG00000259118.5	+	antisense	KNOWN	RP11-840I19.3	4	3	0.204393
chr14	65124352	65124542	65124447	ENSG00000222985.1	-	snRNA	KNOWN	RNU2-14P	1	1	0.346989
chr14	65212893	65222347	65217620	ENSG00000255002.1	-	lincRNA	KNOWN	CTD-2509G16.2	1	4	0.099941
chr14	65234515	65235101	65234808	ENSG00000258878.1	-	processed_pseudogene	KNOWN	CTD-2509G16.3	1	1	0.275789
chr14	65236480	65318790	65277635	ENSG00000258760.1	-	lincRNA	KNOWN	CTD-2509G16.5	2	4	0.248912
chr14	65266638	65267690	65267164	ENSG00000258613.1	-	processed_pseudogene	KNOWN	RPL21P7	1	2	0.083909
chr14	65268829	65269098	65268963	ENSG00000214759.3	+	processed_pseudogene	KNOWN	CTD-2509G16.1	1	1	0.083909
chr14	65279267	65281166	65280216	ENSG00000259078.2	+	processed_pseudogene	KNOWN	PTBP1P	1	2	0.335549
chr14	65335117	65335183	65335150	ENSG00000266740.1	-	miRNA	KNOWN	MIR4708	1	1	0.283651
chr14	65410592	65744121	65577356	ENSG00000033170.16	+	protein_coding	KNOWN	FUT8	15	11	-0.170952
chr14	65411170	65412690	65411930	ENSG00000276116.2	-	antisense	KNOWN	FUT8-AS1	1	1	-0.089719
chr14	65467807	65468341	65468074	ENSG00000180662.8	-	processed_pseudogene	KNOWN	RPL21P8	1	1	-0.094709
chr14	65471102	65471186	65471144	ENSG00000207781.1	+	miRNA	KNOWN	MIR625	1	1	0.177722
chr14	65528830	65529574	65529202	ENSG00000258980.1	-	processed_pseudogene	KNOWN	EIF1AXP2	1	2	-0.171043
chr14	65879592	65881070	65880331	ENSG00000258629.1	-	processed_pseudogene	KNOWN	CTD-2014B16.1	1	1	-0.110995
chr14	65900932	65901451	65901191	ENSG00000258960.1	-	processed_pseudogene	KNOWN	CTD-2014B16.2	1	1	-0.629707
chr14	65957297	66004523	65980910	ENSG00000258847.1	-	lincRNA	KNOWN	CTD-2014B16.3	1	4	0.097000
chr14	65986967	65987447	65987207	ENSG00000277651.1	-	sense_intronic	KNOWN	CTD-2014B16.5	1	1	0.008663
chr14	66011641	66011733	66011687	ENSG00000238876.1	-	miRNA	NOVEL	AL391261.1	1	1	-0.291337
chr14	66012830	66013789	66013309	ENSG00000224861.1	-	processed_pseudogene	KNOWN	YBX1P1	1	1	-0.291337
chr14	66111581	66125847	66118714	ENSG00000258502.5	+	lincRNA	KNOWN	RP11-783L4.1	5	4	-0.318096
chr14	66177527	66177635	66177581	ENSG00000200860.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.500130
chr14	66212810	66509394	66361102	ENSG00000258561.1	-	lincRNA	KNOWN	RP11-72M17.1	3	5	-0.369482
chr14	66486354	66498553	66492453	ENSG00000196553.13	+	processed_transcript	KNOWN	LINC00238	6	11	-0.419916
chr14	66507407	67181803	66844605	ENSG00000171723.15	+	protein_coding	KNOWN	GPHN	16	25	-0.424795
chr14	66597716	66597794	66597755	ENSG00000281779.1	-	miRNA	NOVEL	AL139295.1	1	1	-0.524680
chr14	66760532	66761018	66760775	ENSG00000258796.1	+	processed_pseudogene	KNOWN	CTD-2560C21.1	1	1	-0.710971
chr14	66969038	66969816	66969427	ENSG00000258490.1	-	antisense	KNOWN	RP11-862P13.1	1	2	-0.335962
chr14	67189393	67228550	67208971	ENSG00000172717.15	+	protein_coding	KNOWN	FAM71D	11	10	0.105812
chr14	67199062	67200327	67199694	ENSG00000258988.1	+	processed_pseudogene	KNOWN	RP11-125H8.1	1	1	0.234792
chr14	67241109	67335819	67288464	ENSG00000072415.8	+	protein_coding	KNOWN	MPP5	7	15	0.071548
chr14	67294371	67360265	67327318	ENSG00000100554.11	-	protein_coding	KNOWN	ATP6V1D	14	13	0.025414
chr14	67340068	67340176	67340122	ENSG00000199755.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.226084
chr14	67359997	67386516	67373256	ENSG00000134001.12	+	protein_coding	KNOWN	EIF2S1	6	8	0.342537
chr14	67386983	67412200	67399591	ENSG00000100558.8	-	protein_coding	KNOWN	PLEK2	6	9	0.340005
chr14	67441855	67441930	67441892	ENSG00000265993.1	-	miRNA	KNOWN	MIR5694	1	1	0.220634
chr14	67447084	67533739	67490411	ENSG00000198133.8	-	protein_coding	KNOWN	TMEM229B	8	9	0.320810
chr14	67533301	67589612	67561456	ENSG00000054690.13	+	protein_coding	KNOWN	PLEKHH1	16	29	0.413326
chr14	67581955	67600287	67591121	ENSG00000100564.8	-	protein_coding	KNOWN	PIGH	12	5	0.346538
chr14	67610986	67613864	67612425	ENSG00000259502.1	+	processed_pseudogene	KNOWN	RP11-643G16.3	1	3	0.311773
chr14	67614929	67616626	67615777	ENSG00000259648.1	+	transcribed_processed_pseudogene	KNOWN	RP11-643G16.4	2	1	0.311773
chr14	67616903	67617084	67616993	ENSG00000281228.1	+	pseudogene	NOVEL	AL132640.1	1	2	0.311773
chr14	67617302	67617415	67617358	ENSG00000201529.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.311773
chr14	67619798	67651720	67635759	ENSG00000081181.7	+	protein_coding	KNOWN	ARG2	4	8	0.180910
chr14	67647075	67674831	67660953	ENSG00000100568.10	-	protein_coding	KNOWN	VTI1B	6	7	0.287334
chr14	67652300	67652614	67652457	ENSG00000258626.2	-	processed_pseudogene	KNOWN	COX7A2P1	1	1	0.264828
chr14	67657105	67657211	67657158	ENSG00000272253.1	-	rRNA	KNOWN	RNA5SP386	1	1	0.264828
chr14	67659820	67690367	67675093	ENSG00000258466.5	-	protein_coding	KNOWN	RP11-1012A1.4	4	5	0.415282
chr14	67676801	67695814	67686307	ENSG00000072042.12	-	protein_coding	KNOWN	RDH11	11	7	0.503622
chr14	67701886	67734452	67718169	ENSG00000139988.9	+	protein_coding	KNOWN	RDH12	4	9	0.229052
chr14	67705954	67706252	67706103	ENSG00000241542.3	+	misc_RNA	KNOWN	RN7SL369P	1	1	0.535340
chr14	67714545	67715204	67714874	ENSG00000258618.2	+	processed_pseudogene	KNOWN	RPL21P9	1	2	0.111891
chr14	67727374	67816590	67771982	ENSG00000072121.15	-	protein_coding	KNOWN	ZFYVE26	11	42	0.305059
chr14	67735195	67735350	67735272	ENSG00000271697.1	+	processed_pseudogene	KNOWN	RP11-1012A1.10	1	1	0.197235
chr14	67751228	67751544	67751386	ENSG00000239820.3	-	misc_RNA	KNOWN	RN7SL213P	1	1	0.225946
chr14	67799004	67799609	67799306	ENSG00000258759.1	+	processed_pseudogene	KNOWN	RP11-1012A1.7	1	1	0.487612
chr14	67819779	68730218	68274998	ENSG00000182185.18	+	protein_coding	KNOWN	RAD51B	24	12	0.217389
chr14	68113706	68114144	68113925	ENSG00000274666.1	-	unprocessed_pseudogene	KNOWN	CTD-2566J3.2	1	1	0.081938
chr14	68125004	68130196	68127600	ENSG00000258837.1	-	antisense	KNOWN	CTD-2566J3.1	1	2	0.097342
chr14	68149617	68149908	68149762	ENSG00000244677.3	-	misc_RNA	KNOWN	RN7SL706P	1	1	0.487920
chr14	68236243	68236539	68236391	ENSG00000243546.3	-	misc_RNA	KNOWN	RN7SL108P	1	1	-0.098764
chr14	68338728	68339528	68339128	ENSG00000240210.3	-	processed_pseudogene	KNOWN	RP11-204K16.1	1	1	0.360481
chr14	68421698	68422196	68421947	ENSG00000258477.1	-	processed_pseudogene	KNOWN	PPIAP6	1	1	0.158334
chr14	68627166	68628445	68627805	ENSG00000259038.1	-	antisense	KNOWN	CTD-2325P2.4	1	2	0.338430
chr14	68683411	68685565	68684488	ENSG00000258623.1	-	antisense	KNOWN	CTD-2325P2.3	1	2	0.416665
chr14	68693090	68693583	68693336	ENSG00000242941.1	+	processed_pseudogene	KNOWN	RPL12P7	1	1	0.592292
chr14	68735922	68736028	68735975	ENSG00000207089.1	-	snRNA	KNOWN	RNU6-921P	1	1	0.394111
chr14	68787660	68796253	68791956	ENSG00000185650.9	-	protein_coding	KNOWN	ZFP36L1	6	3	0.732202
chr14	68861762	68862525	68862143	ENSG00000270975.1	+	unprocessed_pseudogene	KNOWN	MAGOH3P	1	2	0.514447
chr14	68867857	68869951	68868904	ENSG00000258565.1	-	unprocessed_pseudogene	KNOWN	BLZF2P	1	4	0.514447
chr14	68874143	68979440	68926791	ENSG00000072110.13	-	protein_coding	KNOWN	ACTN1	21	22	0.892041
chr14	68887785	68888084	68887934	ENSG00000258967.1	-	processed_pseudogene	KNOWN	HMGN1P3	1	1	0.861037
chr14	68936602	68936864	68936733	ENSG00000258531.2	+	processed_pseudogene	KNOWN	BANF1P1	1	1	0.778575
chr14	68979682	68987463	68983572	ENSG00000259062.2	+	antisense	KNOWN	ACTN1-AS1	2	4	1.077871
chr14	69023150	69023308	69023229	ENSG00000242293.1	-	processed_pseudogene	KNOWN	RP11-226F19.1	1	1	0.772171
chr14	69050881	69153150	69102015	ENSG00000139990.17	-	protein_coding	KNOWN	DCAF5	9	9	0.286575
chr14	69083398	69085389	69084393	ENSG00000259165.1	+	processed_pseudogene	KNOWN	DDX18P1	1	1	0.209229
chr14	69143852	69143953	69143902	ENSG00000206768.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.117083
chr14	69154311	69154804	69154557	ENSG00000276063.1	+	lincRNA	KNOWN	RP11-817G13.3	1	1	0.357973
chr14	69183020	69214092	69198556	ENSG00000258957.1	-	lincRNA	KNOWN	RP11-363J20.1	3	3	0.119889
chr14	69191511	69244020	69217765	ENSG00000081177.18	+	protein_coding	KNOWN	EXD2	13	11	0.147302
chr14	69239166	69260567	69249866	ENSG00000258520.1	-	lincRNA	KNOWN	RP11-363J20.2	1	3	0.252684
chr14	69259277	69357033	69308155	ENSG00000100626.16	+	protein_coding	KNOWN	GALNT16	10	16	0.463280
chr14	69357010	69359308	69358159	ENSG00000280073.1	+	TEC	KNOWN	CTD-2525P14.5	1	1	0.337104
chr14	69380123	69398627	69389375	ENSG00000100632.10	-	protein_coding	KNOWN	ERH	4	4	0.291860
chr14	69398015	69462388	69430201	ENSG00000029364.11	+	protein_coding	KNOWN	SLC39A9	11	8	0.093452
chr14	69484692	69531551	69508121	ENSG00000175985.9	+	protein_coding	KNOWN	PLEKHD1	2	13	0.203801
chr14	69561019	69561470	69561244	ENSG00000244237.1	-	processed_pseudogene	KNOWN	RP11-1046B16.1	1	1	-0.011631
chr14	69569816	69574837	69572326	ENSG00000267909.2	-	protein_coding	KNOWN	CCDC177	1	2	0.452931
chr14	69611596	69715142	69663369	ENSG00000100647.7	+	protein_coding	KNOWN	SUSD6	3	6	0.279324
chr14	69617122	69617648	69617385	ENSG00000273797.1	+	sense_intronic	KNOWN	RP11-1046B16.3	1	1	0.267563
chr14	69726900	69772005	69749452	ENSG00000100650.15	+	protein_coding	KNOWN	SRSF5	19	9	0.266134
chr14	69775417	69797289	69786353	ENSG00000100652.4	-	protein_coding	KNOWN	SLC10A1	1	5	0.127123
chr14	69804203	69804331	69804267	ENSG00000221060.1	-	snoRNA	NOVEL	SNORA11	1	1	0.084214
chr14	69854131	70032366	69943248	ENSG00000198732.10	+	protein_coding	KNOWN	SMOC1	5	12	-0.050028
chr14	69885340	69886140	69885740	ENSG00000242071.3	-	processed_pseudogene	KNOWN	RPL7AP6	1	1	0.125544
chr14	70044217	70189070	70116643	ENSG00000100678.18	-	protein_coding	KNOWN	SLC8A3	10	8	-0.130183
chr14	70187123	70230187	70208655	ENSG00000258422.5	+	antisense	KNOWN	RP11-486O13.2	3	4	-0.169500
chr14	70230224	70232426	70231325	ENSG00000274330.1	+	unprocessed_pseudogene	KNOWN	RP11-486O13.5	1	1	-0.245509
chr14	70234495	70235095	70234795	ENSG00000270610.1	+	processed_pseudogene	KNOWN	RP11-486O13.3	1	1	-0.245509
chr14	70245491	70247801	70246646	ENSG00000235812.4	-	transcribed_processed_pseudogene	KNOWN	ADAM21P1	2	1	-0.245509
chr14	70275296	70291859	70283577	ENSG00000259033.1	+	lincRNA	KNOWN	RP11-718G2.5	1	2	-0.378640
chr14	70325081	70359731	70342406	ENSG00000133983.14	-	protein_coding	KNOWN	COX16	4	4	-0.298702
chr14	70326064	70417074	70371569	ENSG00000258644.5	-	protein_coding	KNOWN	SYNJ2BP-COX16	5	6	-0.158835
chr14	70360892	70361088	70360990	ENSG00000222640.1	+	snRNA	KNOWN	RNU2-51P	1	1	0.005952
chr14	70366496	70417061	70391778	ENSG00000213463.4	-	protein_coding	KNOWN	SYNJ2BP	2	4	-0.084453
chr14	70425812	70547464	70486638	ENSG00000257759.2	-	lincRNA	KNOWN	RP11-486O13.4	1	3	-0.218205
chr14	70452157	70459899	70456028	ENSG00000139985.6	+	protein_coding	KNOWN	ADAM21	1	2	-0.290728
chr14	70468881	70483756	70476318	ENSG00000259158.2	-	lincRNA	KNOWN	ADAM20P1	2	2	-0.181529
chr14	70496107	70496210	70496158	ENSG00000252263.1	+	snRNA	KNOWN	RNU6-659P	1	1	-0.078941
chr14	70522358	70535015	70528686	ENSG00000134007.3	-	protein_coding	KNOWN	ADAM20	1	2	-0.181730
chr14	70556206	70557478	70556842	ENSG00000274397.1	+	unprocessed_pseudogene	KNOWN	CTD-2540L5.9	1	2	-0.428265
chr14	70581257	70600690	70590973	ENSG00000133997.11	-	protein_coding	KNOWN	MED6	12	9	-0.059952
chr14	70593314	70641204	70617259	ENSG00000259115.1	-	lincRNA	KNOWN	CTD-2540L5.5	1	5	-0.116783
chr14	70594552	70595770	70595161	ENSG00000258951.1	+	processed_pseudogene	KNOWN	KRT18P7	1	1	-0.007544
chr14	70608798	70641298	70625048	ENSG00000245466.1	-	lincRNA	KNOWN	CTD-2540L5.6	1	3	-0.169744
chr14	70610086	70610379	70610232	ENSG00000240837.3	+	misc_RNA	KNOWN	RN7SL77P	1	1	-0.030492
chr14	70641787	70675360	70658573	ENSG00000133985.2	+	protein_coding	KNOWN	TTC9	1	3	-0.146400
chr14	70698698	70712153	70705425	ENSG00000258689.1	+	lincRNA	KNOWN	LINC01269	1	4	0.112088
chr14	70722526	70809534	70766030	ENSG00000006432.15	-	protein_coding	KNOWN	MAP3K9	7	13	0.007481
chr14	70769486	70769621	70769553	ENSG00000280875.1	-	miRNA	NOVEL	AC004816.1	1	1	-0.461492
chr14	70810205	70815403	70812804	ENSG00000259153.1	+	lincRNA	KNOWN	RP6-65G23.3	2	2	0.158081
chr14	70822004	70823984	70822994	ENSG00000275630.1	+	lincRNA	KNOWN	RP6-65G23.5	1	2	0.158081
chr14	70858844	70859429	70859136	ENSG00000258431.1	-	processed_pseudogene	KNOWN	RP1-292L20.2	1	1	-0.008702
chr14	70906657	70907111	70906884	ENSG00000274818.1	-	lincRNA	KNOWN	RP1-292L20.3	1	1	0.201815
chr14	70907405	71115382	71011393	ENSG00000100731.15	+	protein_coding	KNOWN	PCNX	15	36	-0.175488
chr14	71031686	71031970	71031828	ENSG00000258930.1	-	transcribed_processed_pseudogene	KNOWN	RP5-1163L11.2	1	1	-0.203464
chr14	71044375	71044640	71044507	ENSG00000258966.1	-	transcribed_processed_pseudogene	KNOWN	GTF3AP2	1	1	-0.203464
chr14	71085482	71085833	71085657	ENSG00000258571.1	-	processed_pseudogene	KNOWN	PTTG4P	1	1	-0.459548
chr14	71141125	71143253	71142189	ENSG00000269927.1	-	lincRNA	KNOWN	RP6-91H8.3	1	1	0.298954
chr14	71181456	71182106	71181781	ENSG00000259907.1	+	lincRNA	KNOWN	RP6-91H8.2	1	1	0.243995
chr14	71212633	71218216	71215424	ENSG00000258517.1	+	lincRNA	KNOWN	RP6-91H8.1	1	2	0.188422
chr14	71219100	71222724	71220912	ENSG00000269945.1	+	lincRNA	KNOWN	RP6-91H8.5	1	1	0.188422
chr14	71292729	71321814	71307271	ENSG00000259146.3	-	antisense	KNOWN	RP1-261D10.2	2	3	0.091712
chr14	71320449	71741229	71530839	ENSG00000197555.9	+	protein_coding	KNOWN	SIPA1L1	18	22	0.082445
chr14	71330342	71330738	71330540	ENSG00000259079.1	-	processed_pseudogene	KNOWN	RP1-261D10.1	1	1	0.075019
chr14	71398337	71398407	71398372	ENSG00000207444.1	+	snoRNA	KNOWN	SNORD56B	1	1	-0.101780
chr14	71448689	71448958	71448823	ENSG00000242330.3	+	misc_RNA	KNOWN	RN7SL683P	1	1	0.101037
chr14	71848606	71908430	71878518	ENSG00000266869.1	+	lincRNA	KNOWN	RP6-114E22.1	1	2	-0.106842
chr14	71932439	72566529	72249484	ENSG00000182732.16	+	protein_coding	KNOWN	RGS6	19	19	-0.216413
chr14	71965306	71966899	71966102	ENSG00000280188.1	+	protein_coding	KNOWN	AC005477.1	1	1	-0.460549
chr14	72022407	72022516	72022461	ENSG00000200298.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.475568
chr14	72070845	72070915	72070880	ENSG00000275829.1	+	miRNA	NOVEL	AC005227.1	1	1	-0.289098
chr14	72516820	72516898	72516859	ENSG00000273830.1	+	miRNA	KNOWN	MIR7843	1	1	0.474239
chr14	72552580	72595125	72573852	ENSG00000258871.1	-	lincRNA	KNOWN	RP3-514A23.2	1	3	0.441873
chr14	72619296	72894116	72756706	ENSG00000205683.11	-	protein_coding	KNOWN	DPF3	16	11	0.337339
chr14	72853224	72853331	72853277	ENSG00000206751.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.211044
chr14	72926332	72959703	72943017	ENSG00000119599.16	+	protein_coding	KNOWN	DCAF4	15	14	0.498626
chr14	72929612	72929930	72929771	ENSG00000176043.5	-	processed_pseudogene	KNOWN	RP1-146I3.1	1	1	0.076310
chr14	72960595	72961993	72961294	ENSG00000259015.1	+	processed_pseudogene	KNOWN	RP11-109N23.6	1	2	0.670776
chr14	72963645	72964008	72963826	ENSG00000239544.1	-	processed_pseudogene	KNOWN	RP11-109N23.1	1	1	0.670776
chr14	72969451	73027212	72998331	ENSG00000165861.13	-	protein_coding	KNOWN	ZFYVE1	9	13	0.247849
chr14	73040619	73040914	73040766	ENSG00000241487.3	-	misc_RNA	KNOWN	RN7SL586P	1	1	0.179939
chr14	73057925	73059415	73058670	ENSG00000258813.2	-	antisense	KNOWN	RP11-109N23.4	1	2	0.320692
chr14	73058436	73123898	73091167	ENSG00000119707.13	+	protein_coding	KNOWN	RBM25	12	20	0.220327
chr14	73068108	73068618	73068363	ENSG00000258448.1	-	processed_pseudogene	KNOWN	RP11-109N23.5	1	1	0.320692
chr14	73136418	73223691	73180054	ENSG00000080815.18	+	protein_coding	KNOWN	PSEN1	25	12	0.466460
chr14	73189763	73190004	73189883	ENSG00000259109.1	+	processed_pseudogene	KNOWN	RP4-687K1.2	1	1	0.444286
chr14	73208378	73208463	73208420	ENSG00000274991.1	-	miRNA	NOVEL	AC004846.1	1	1	0.483075
chr14	73237497	73274640	73256068	ENSG00000100767.15	+	protein_coding	KNOWN	PAPLN	11	27	0.797582
chr14	73242651	73245979	73244315	ENSG00000258376.2	-	antisense	KNOWN	RP4-647C14.2	1	2	0.738593
chr14	73246818	73246880	73246849	ENSG00000252839.1	-	snRNA	KNOWN	RNU6-419P	1	1	0.738593
chr14	73272182	73274081	73273131	ENSG00000258944.1	-	antisense	KNOWN	RP4-647C14.3	1	3	0.785439
chr14	73275107	73463642	73369374	ENSG00000133961.19	-	protein_coding	KNOWN	NUMB	32	13	0.227296
chr14	73462423	73477175	73469799	ENSG00000251393.3	+	processed_transcript	KNOWN	RP1-240K6.3	2	3	0.305059
chr14	73478484	73558947	73518715	ENSG00000187105.8	-	protein_coding	KNOWN	HEATR4	7	18	0.472109
chr14	73490964	73493392	73492178	ENSG00000170468.7	+	protein_coding	KNOWN	C14orf169	1	1	0.509310
chr14	73517233	73520648	73518940	ENSG00000258443.1	-	sense_intronic	KNOWN	RP3-414A15.11	1	2	0.374579
chr14	73522878	73530610	73526744	ENSG00000258695.2	+	antisense	KNOWN	RP3-414A15.2	1	2	0.398031
chr14	73537114	73543794	73540454	ENSG00000184227.7	+	protein_coding	KNOWN	ACOT1	2	3	0.671352
chr14	73539221	73539781	73539501	ENSG00000258408.1	-	processed_pseudogene	KNOWN	NT5CP2	1	1	0.671352
chr14	73567620	73575658	73571639	ENSG00000119673.14	+	protein_coding	KNOWN	ACOT2	5	4	0.552520
chr14	73571159	73571667	73571413	ENSG00000258524.1	-	processed_pseudogene	KNOWN	NT5CP1	1	1	0.661357
chr14	73580694	73582918	73581806	ENSG00000279026.1	+	TEC	KNOWN	RP3-414A15.12	1	1	0.661357
chr14	73591706	73596496	73594101	ENSG00000177465.4	+	protein_coding	KNOWN	ACOT4	1	3	0.642416
chr14	73610945	73619888	73615416	ENSG00000205669.2	+	protein_coding	KNOWN	ACOT6	2	4	0.609267
chr14	73616700	73633941	73625320	ENSG00000258603.3	-	antisense	KNOWN	RP3-414A15.10	2	2	0.558623
chr14	73631475	73632019	73631747	ENSG00000258972.1	+	processed_pseudogene	KNOWN	NDUFB8P1	1	1	0.387768
chr14	73644875	73703732	73674303	ENSG00000119661.14	+	protein_coding	KNOWN	DNAL1	9	9	0.190362
chr14	73659564	73659660	73659612	ENSG00000251907.1	-	snRNA	KNOWN	RNU6-240P	1	1	0.236382
chr14	73698103	73700351	73699227	ENSG00000258660.1	-	antisense	KNOWN	RP4-693M11.3	1	2	0.384599
chr14	73711783	73714372	73713077	ENSG00000176903.4	-	protein_coding	KNOWN	PNMA1	1	1	0.551423
chr14	73715122	73790285	73752703	ENSG00000156030.12	-	protein_coding	KNOWN	ELMSAN1	11	12	0.783954
chr14	73758747	73758819	73758783	ENSG00000264741.1	+	miRNA	KNOWN	MIR4505	1	1	0.937106
chr14	73787360	73803270	73795315	ENSG00000259065.1	+	antisense	KNOWN	RP5-1021I20.1	2	3	0.714694
chr14	73822559	73830135	73826347	ENSG00000258586.1	-	lincRNA	KNOWN	RP5-1021I20.2	1	2	0.470618
chr14	73840520	73840609	73840564	ENSG00000270576.1	-	processed_pseudogene	KNOWN	RP5-1021I20.7	1	1	0.441799
chr14	73851844	73886827	73869335	ENSG00000140043.11	+	protein_coding	KNOWN	PTGR2	7	10	0.394521
chr14	73851971	73932278	73892124	ENSG00000258653.3	+	protein_coding	KNOWN	RP5-1021I20.4	1	22	0.239593
chr14	73858061	73858165	73858113	ENSG00000223300.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.371566
chr14	73885392	73885555	73885473	ENSG00000273711.1	-	antisense	KNOWN	RP5-1021I20.8	1	1	0.419286
chr14	73886617	73932511	73909564	ENSG00000119725.17	+	protein_coding	KNOWN	ZNF410	24	14	0.122495
chr14	73896164	73938114	73917139	ENSG00000258891.1	-	antisense	KNOWN	RP5-1021I20.5	2	6	0.141050
chr14	73905267	73905636	73905451	ENSG00000270140.1	+	sense_intronic	KNOWN	RP5-1021I20.6	1	1	-0.094160
chr14	73906316	73906427	73906371	ENSG00000199472.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.094160
chr14	73931501	73950414	73940957	ENSG00000156050.8	-	protein_coding	KNOWN	FAM161B	2	9	0.202031
chr14	73949926	73963670	73956798	ENSG00000119723.15	+	protein_coding	KNOWN	COQ6	23	14	0.195649
chr14	73958010	74019399	73988704	ENSG00000187097.12	-	protein_coding	KNOWN	ENTPD5	8	16	0.373048
chr14	74003369	74003777	74003573	ENSG00000279461.1	+	protein_coding	KNOWN	AC005480.1	1	1	0.249533
chr14	74019353	74082863	74051108	ENSG00000119636.15	+	protein_coding	KNOWN	BBOF1	7	13	0.295753
chr14	74056850	74084493	74070671	ENSG00000119711.12	-	protein_coding	KNOWN	ALDH6A1	7	12	0.295156
chr14	74084796	74201235	74143015	ENSG00000205659.10	+	protein_coding	KNOWN	LIN52	5	6	0.111901
chr14	74174456	74174753	74174604	ENSG00000239910.3	+	misc_RNA	KNOWN	RN7SL530P	1	1	0.226293
chr14	74192589	74192823	74192706	ENSG00000258513.1	+	transcribed_processed_pseudogene	KNOWN	RP5-892G5.2	1	1	0.245797
chr14	74239472	74262738	74251105	ENSG00000119614.2	+	protein_coding	KNOWN	VSX2	1	5	0.648740
chr14	74285423	74303056	74294239	ENSG00000119688.20	-	protein_coding	KNOWN	ABCD4	28	19	0.624627
chr14	74289127	74294425	74291776	ENSG00000258559.2	-	sense_overlapping	KNOWN	AC005519.4	1	2	0.643767
chr14	74303069	74360008	74331538	ENSG00000133980.4	+	protein_coding	KNOWN	VRTN	2	3	0.568637
chr14	74305425	74306527	74305976	ENSG00000258737.2	+	processed_pseudogene	KNOWN	SUB1P2	1	3	0.676954
chr14	74377818	74378418	74378118	ENSG00000177776.8	-	processed_pseudogene	KNOWN	RPS2P2	1	1	0.291556
chr14	74405893	74426102	74415997	ENSG00000183379.8	-	protein_coding	KNOWN	SYNDIG1L	3	4	0.595352
chr14	74471930	74472360	74472145	ENSG00000270000.1	-	lincRNA	KNOWN	RP3-449M8.9	1	1	0.791184
chr14	74474007	74474864	74474435	ENSG00000259005.1	-	lincRNA	KNOWN	RP3-449M8.6	1	2	0.791184
chr14	74476192	74494177	74485184	ENSG00000119655.8	-	protein_coding	KNOWN	NPC2	9	5	0.669271
chr14	74480133	74480204	74480168	ENSG00000265649.1	-	miRNA	KNOWN	MIR4709	1	1	0.791184
chr14	74482985	74483435	74483210	ENSG00000258769.1	+	processed_pseudogene	KNOWN	RAP1AP	1	1	0.791184
chr14	74493720	74497106	74495413	ENSG00000165898.13	+	protein_coding	KNOWN	ISCA2	4	4	0.266388
chr14	74498170	74612378	74555274	ENSG00000119681.11	-	protein_coding	KNOWN	LTBP2	6	36	0.808989
chr14	74552181	74560048	74556114	ENSG00000258425.1	+	lincRNA	KNOWN	CTD-2207P18.1	1	2	0.975799
chr14	74614693	74616647	74615670	ENSG00000258976.1	-	lincRNA	KNOWN	CTD-2207P18.2	2	2	0.893578
chr14	74653437	74713115	74683276	ENSG00000119682.16	-	protein_coding	KNOWN	AREL1	17	20	0.337137
chr14	74658049	74658590	74658319	ENSG00000258439.1	+	processed_pseudogene	KNOWN	RP11-173A8.2	1	1	0.706535
chr14	74711936	74712045	74711990	ENSG00000222604.2	+	snoRNA	NOVEL	SNORA7	1	1	0.254097
chr14	74713144	74738620	74725882	ENSG00000119616.11	+	protein_coding	KNOWN	FCF1	8	8	0.340406
chr14	74763366	74859435	74811400	ENSG00000119596.17	+	protein_coding	KNOWN	YLPM1	9	21	0.264974
chr14	74852871	74871940	74862405	ENSG00000119608.12	-	protein_coding	KNOWN	PROX2	3	4	0.187930
chr14	74873684	74874254	74873969	ENSG00000258587.1	+	processed_pseudogene	KNOWN	RP11-316E14.2	1	1	0.465450
chr14	74881891	74903745	74892818	ENSG00000119689.14	+	protein_coding	KNOWN	DLST	16	15	0.642225
chr14	74903954	74923396	74913675	ENSG00000198208.11	-	protein_coding	KNOWN	RPS6KL1	16	12	0.770019
chr14	74941834	74955784	74948809	ENSG00000119630.13	-	protein_coding	KNOWN	PGF	8	7	0.577313
chr14	75002911	75012366	75007638	ENSG00000119718.10	+	protein_coding	KNOWN	EIF2B2	7	8	0.434548
chr14	75004719	75008481	75006600	ENSG00000258646.1	-	antisense	KNOWN	RP11-950C14.3	1	2	0.417158
chr14	75011269	75012851	75012060	ENSG00000279594.1	-	TEC	KNOWN	RP11-950C14.10	1	1	0.486623
chr14	75013764	75051532	75032648	ENSG00000119684.15	-	protein_coding	KNOWN	MLH3	13	13	0.509636
chr14	75020761	75020867	75020814	ENSG00000206924.1	+	snRNA	KNOWN	RNU6-689P	1	1	0.486623
chr14	75053221	75069483	75061352	ENSG00000119640.8	-	protein_coding	KNOWN	ACYP1	6	4	0.083954
chr14	75064170	75079987	75072078	ENSG00000119703.13	+	protein_coding	KNOWN	ZC2HC1C	9	3	0.319632
chr14	75079353	75127344	75103348	ENSG00000119638.12	-	protein_coding	KNOWN	NEK9	11	22	0.404294
chr14	75116426	75116600	75116513	ENSG00000258978.1	-	processed_pseudogene	KNOWN	HIF1AP1	1	1	0.308415
chr14	75127153	75136930	75132041	ENSG00000259138.1	+	antisense	KNOWN	RP11-950C14.7	1	2	0.258166
chr14	75131470	75176631	75154050	ENSG00000170348.8	-	protein_coding	KNOWN	TMED10	7	6	0.312880
chr14	75176929	75177418	75177173	ENSG00000273565.1	+	lincRNA	KNOWN	CTD-3075F15.1	1	1	0.351960
chr14	75202081	75202169	75202125	ENSG00000252013.1	-	snRNA	KNOWN	RNU4ATAC14P	1	1	0.434384
chr14	75238616	75269283	75253949	ENSG00000258740.1	-	lincRNA	KNOWN	RP11-293M10.1	1	2	0.505223
chr14	75259411	75271950	75265680	ENSG00000258820.5	+	antisense	KNOWN	RP11-293M10.2	2	5	0.549571
chr14	75278774	75282230	75280502	ENSG00000170345.9	+	protein_coding	KNOWN	FOS	10	4	0.565923
chr14	75292131	75292495	75292313	ENSG00000119660.4	-	processed_pseudogene	KNOWN	DPPA5P4	1	1	0.482367
chr14	75294404	75296638	75295521	ENSG00000259687.1	+	lincRNA	KNOWN	LINC01220	2	3	0.482367
chr14	75423683	75427741	75425712	ENSG00000259319.1	-	antisense	KNOWN	RP11-293M10.6	2	2	0.392501
chr14	75427716	75474111	75450913	ENSG00000140044.12	+	protein_coding	KNOWN	JDP2	7	4	0.715189
chr14	75522425	75547015	75534720	ENSG00000156127.6	+	protein_coding	KNOWN	BATF	3	3	0.114164
chr14	75574888	75579588	75577238	ENSG00000224721.1	-	antisense	KNOWN	AC007182.6	1	3	0.335549
chr14	75578617	75663214	75620915	ENSG00000119686.9	+	protein_coding	KNOWN	FLVCR2	13	10	0.227637
chr14	75595805	75596206	75596005	ENSG00000242951.1	-	processed_pseudogene	KNOWN	RP11-507E23.1	1	1	0.415780
chr14	75604173	75604278	75604225	ENSG00000201096.1	+	rRNA	KNOWN	RNA5SP387	1	1	0.415780
chr14	75633625	75955078	75794351	ENSG00000119685.19	+	protein_coding	KNOWN	TTLL5	22	32	0.051385
chr14	75649791	75661189	75655490	ENSG00000133935.6	-	protein_coding	KNOWN	C14orf1	1	5	0.229916
chr14	75814502	75847698	75831100	ENSG00000259103.1	-	antisense	KNOWN	RP11-270M14.4	2	3	0.070223
chr14	75838157	75839114	75838635	ENSG00000242488.2	-	transcribed_processed_pseudogene	KNOWN	RP11-270M14.1	1	1	0.044426
chr14	75902136	76084585	75993360	ENSG00000119650.12	+	protein_coding	KNOWN	IFT43	12	10	0.168149
chr14	75958099	75982991	75970545	ENSG00000119699.7	-	protein_coding	KNOWN	TGFB3	7	7	0.251597
chr14	75970924	75971587	75971255	ENSG00000258876.1	+	lincRNA	KNOWN	RP11-270M14.5	1	2	0.292016
chr14	76013679	76014143	76013911	ENSG00000258578.2	+	processed_pseudogene	KNOWN	RP11-98L12.2	1	1	-0.073817
chr14	76151916	76254342	76203129	ENSG00000089916.17	+	protein_coding	KNOWN	GPATCH2L	14	11	-0.096714
chr14	76235817	76263474	76249645	ENSG00000258454.1	+	sense_overlapping	KNOWN	RP11-361H10.3	1	3	-0.150223
chr14	76279173	76283103	76281138	ENSG00000280078.1	+	TEC	KNOWN	RP11-361H10.5	1	1	0.326047
chr14	76280943	76310066	76295504	ENSG00000258402.1	-	lincRNA	KNOWN	RP11-516J2.1	1	3	-0.021030
chr14	76310614	76501841	76406227	ENSG00000119715.14	+	protein_coding	KNOWN	ESRRB	8	12	0.025468
chr14	76348055	76348138	76348096	ENSG00000212061.2	-	miRNA	NOVEL	AC016543.1	1	1	-0.259720
chr14	76495363	76726712	76611037	ENSG00000259124.1	-	lincRNA	KNOWN	RP11-187O7.3	1	4	-0.028886
chr14	76633714	76634028	76633871	ENSG00000271423.1	+	processed_pseudogene	KNOWN	CYCSP1	1	1	-0.155021
chr14	76634775	76635661	76635218	ENSG00000242952.1	-	transcribed_processed_pseudogene	KNOWN	RPSAP3	1	1	-0.155021
chr14	76690139	76690742	76690440	ENSG00000258566.2	-	processed_pseudogene	KNOWN	RP11-99E15.3	1	1	-0.156921
chr14	76710658	76761388	76736023	ENSG00000258569.1	-	lincRNA	KNOWN	RP11-99E15.2	1	3	-0.103998
chr14	76762189	76783015	76772602	ENSG00000071246.10	+	protein_coding	KNOWN	VASH1	5	7	0.228667
chr14	76774284	76781518	76777901	ENSG00000259081.1	-	antisense	KNOWN	RP11-488C13.6	2	2	0.423003
chr14	76778952	76782249	76780600	ENSG00000258610.1	+	lincRNA	KNOWN	RP11-488C13.7	1	2	0.423003
chr14	76781733	76786724	76784228	ENSG00000258301.3	-	lincRNA	KNOWN	RP11-488C13.5	2	3	0.423003
chr14	76786178	76826246	76806212	ENSG00000013523.9	-	protein_coding	KNOWN	ANGEL1	6	10	0.165569
chr14	76826372	76870302	76848337	ENSG00000100565.15	+	protein_coding	KNOWN	LRRC74A	6	15	0.072357
chr14	76886377	76886750	76886563	ENSG00000241081.1	-	processed_pseudogene	KNOWN	RP11-488C13.1	1	1	0.306117
chr14	76890263	76890613	76890438	ENSG00000223174.1	+	misc_RNA	KNOWN	RN7SKP17	1	1	0.795136
chr14	76921840	76924649	76923244	ENSG00000259058.1	-	lincRNA	KNOWN	RP11-488C13.4	1	4	0.465722
chr14	76959638	76965802	76962720	ENSG00000258602.1	+	lincRNA	KNOWN	RP11-7F17.7	1	3	0.735471
chr14	76967518	76967765	76967641	ENSG00000266553.2	-	misc_RNA	KNOWN	RN7SL356P	1	1	0.735471
chr14	76968683	76969145	76968914	ENSG00000243225.2	+	processed_pseudogene	KNOWN	RP11-7F17.1	1	1	0.735471
chr14	77024543	77028699	77026621	ENSG00000119669.4	-	protein_coding	KNOWN	IRF2BPL	1	1	0.800826
chr14	77028086	77031572	77029829	ENSG00000273729.1	+	antisense	KNOWN	RP11-7F17.8	1	1	0.625552
chr14	77041064	77069503	77055283	ENSG00000246548.3	+	lincRNA	KNOWN	RP11-7F17.5	1	4	0.566838
chr14	77048172	77086446	77067309	ENSG00000258473.1	-	lincRNA	KNOWN	RP11-7F17.4	1	3	0.547340
chr14	77069180	77076344	77072762	ENSG00000258819.1	-	lincRNA	KNOWN	RP11-7F17.3	3	3	0.473733
chr14	77098097	77117287	77107692	ENSG00000198894.7	+	protein_coding	KNOWN	CIPC	8	5	0.232838
chr14	77098311	77225462	77161886	ENSG00000259164.1	+	protein_coding	KNOWN	RP11-463C8.4	1	6	0.230476
chr14	77116568	77259495	77188031	ENSG00000165548.10	+	protein_coding	KNOWN	TMEM63C	8	24	0.266889
chr14	77131270	77142734	77137002	ENSG00000177108.5	-	protein_coding	KNOWN	ZDHHC22	3	3	0.331943
chr14	77140683	77142996	77141839	ENSG00000269883.1	+	antisense	KNOWN	RP11-463C8.7	1	1	0.331943
chr14	77173075	77173652	77173363	ENSG00000258552.1	-	processed_pseudogene	KNOWN	RP11-463C8.5	1	1	-0.065888
chr14	77201026	77201140	77201083	ENSG00000201384.1	-	snoRNA	NOVEL	SNORA32	1	1	0.279077
chr14	77244287	77244348	77244317	ENSG00000276659.1	+	miRNA	NOVEL	AC007375.1	1	1	0.368405
chr14	77265483	77271312	77268397	ENSG00000165553.4	-	protein_coding	KNOWN	NGB	1	4	0.460560
chr14	77266218	77266290	77266254	ENSG00000221754.1	+	miRNA	KNOWN	MIR1260A	1	1	0.472940
chr14	77274956	77320884	77297920	ENSG00000009830.11	-	protein_coding	KNOWN	POMT2	23	21	0.292873
chr14	77320884	77331597	77326240	ENSG00000100577.18	+	protein_coding	KNOWN	GSTZ1	19	10	0.355237
chr14	77335021	77377109	77356065	ENSG00000100580.7	-	protein_coding	KNOWN	TMED8	1	6	0.205581
chr14	77359423	77359916	77359669	ENSG00000258510.2	+	processed_pseudogene	KNOWN	RP11-493G17.4	1	1	0.051578
chr14	77376689	77391497	77384093	ENSG00000100583.4	+	protein_coding	KNOWN	SAMD15	2	3	0.015851
chr14	77394021	77423517	77408769	ENSG00000165555.9	-	protein_coding	KNOWN	NOXRED1	3	6	0.073245
chr14	77416398	77416772	77416585	ENSG00000280308.1	+	protein_coding	KNOWN	AF111168.2	1	1	0.185101
chr14	77426675	77457952	77442313	ENSG00000151445.15	-	protein_coding	KNOWN	VIPAS39	11	21	0.020710
chr14	77447966	77448072	77448019	ENSG00000277645.1	-	miRNA	NOVEL	AF111168.1	1	1	-0.017831
chr14	77457870	77469474	77463672	ENSG00000100591.7	+	protein_coding	KNOWN	AHSA1	13	9	0.048923
chr14	77458206	77458277	77458241	ENSG00000280888.1	+	miRNA	NOVEL	AF111168.3	1	1	0.048923
chr14	77466284	77466436	77466360	ENSG00000212371.1	+	snoRNA	NOVEL	SNORA46	1	1	0.048923
chr14	77474394	77498850	77486622	ENSG00000100593.17	-	protein_coding	KNOWN	ISM2	8	8	0.259897
chr14	77505997	77616773	77561385	ENSG00000100596.6	-	protein_coding	KNOWN	SPTLC2	6	12	0.163255
chr14	77547564	77547641	77547602	ENSG00000281458.1	-	miRNA	NOVEL	AF111168.4	1	1	0.027861
chr14	77547566	77547846	77547706	ENSG00000240233.3	-	misc_RNA	KNOWN	RN7SL587P	1	1	0.027861
chr14	77652827	77653055	77652941	ENSG00000258668.1	-	processed_pseudogene	KNOWN	COX6CP11	1	1	0.696063
chr14	77672404	77708020	77690212	ENSG00000100601.9	-	protein_coding	KNOWN	ALKBH1	4	6	0.079875
chr14	77683202	77683989	77683595	ENSG00000239272.1	-	processed_pseudogene	KNOWN	RPL21P10	1	2	0.173933
chr14	77696591	77697377	77696984	ENSG00000258917.1	+	processed_pseudogene	KNOWN	ZMYND19P1	1	1	-0.011959
chr14	77708071	77761104	77734587	ENSG00000119705.9	+	protein_coding	KNOWN	SLIRP	12	5	0.004002
chr14	77717599	77761207	77739403	ENSG00000100603.13	-	protein_coding	KNOWN	SNW1	7	14	0.004912
chr14	77760830	77769742	77765286	ENSG00000197734.8	+	protein_coding	KNOWN	C14orf178	4	3	-0.053686
chr14	77800083	77935012	77867547	ENSG00000063761.15	+	protein_coding	KNOWN	ADCK1	8	11	0.161519
chr14	77821030	77821142	77821086	ENSG00000199440.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.372669
chr14	78059942	78060278	78060110	ENSG00000258421.2	-	processed_pseudogene	KNOWN	FXNP1	1	1	-0.037568
chr14	78170373	79868290	79019331	ENSG00000021645.18	+	protein_coding	KNOWN	NRXN3	18	20	-0.342457
chr14	78177803	78177921	78177862	ENSG00000199454.1	-	rRNA	KNOWN	RNA5SP388	1	1	-0.129222
chr14	78231281	78231619	78231450	ENSG00000239438.1	-	processed_pseudogene	KNOWN	RP11-332E19.1	1	1	0.076395
chr14	78279572	78283376	78281474	ENSG00000258723.1	-	antisense	KNOWN	RP11-332E19.2	1	3	-0.166320
chr14	78397878	78397959	78397918	ENSG00000239163.1	-	miRNA	NOVEL	AC007056.1	1	1	-0.584469
chr14	78617866	78617975	78617920	ENSG00000221178.1	+	miRNA	NOVEL	AC008045.1	1	1	0.032403
chr14	78695321	78698122	78696721	ENSG00000258719.1	-	antisense	KNOWN	RP11-232C2.3	1	2	-0.695160
chr14	78703615	78709934	78706774	ENSG00000258874.1	-	antisense	KNOWN	RP11-232C2.2	1	2	-0.695160
chr14	78744398	78753878	78749138	ENSG00000258478.1	-	antisense	KNOWN	RP11-232C2.1	1	2	-0.138890
chr14	79072132	79074767	79073449	ENSG00000258829.1	-	antisense	KNOWN	CTD-2243E23.1	2	2	-0.628854
chr14	79199982	79201632	79200807	ENSG00000258419.1	+	sense_intronic	KNOWN	RP11-588P7.1	1	2	-0.379513
chr14	79246668	79249023	79247845	ENSG00000258662.1	-	antisense	KNOWN	RP11-588P7.2	1	5	-0.500584
chr14	79611418	79633311	79622364	ENSG00000259106.1	-	antisense	KNOWN	RP11-242P2.2	1	3	-0.267972
chr14	79661666	79791263	79726464	ENSG00000258637.1	-	antisense	KNOWN	RP11-242P2.1	1	4	-0.432407
chr14	79893080	79974169	79933624	ENSG00000258416.1	-	lincRNA	KNOWN	RP11-526N18.1	1	3	-0.455740
chr14	80197527	80387757	80292642	ENSG00000211448.11	-	protein_coding	KNOWN	DIO2	11	5	-0.284065
chr14	80211419	80455469	80333444	ENSG00000258766.1	+	antisense	KNOWN	DIO2-AS1	1	9	-0.209334
chr14	80476983	80959517	80718250	ENSG00000100629.16	-	protein_coding	KNOWN	CEP128	16	25	-0.187946
chr14	80822524	80822796	80822660	ENSG00000258452.1	+	processed_pseudogene	KNOWN	RP11-757H14.2	1	1	-0.183188
chr14	80954989	81146302	81050645	ENSG00000165409.15	+	protein_coding	KNOWN	TSHR	9	11	-0.334176
chr14	80981988	80983638	80982813	ENSG00000258915.1	+	processed_pseudogene	KNOWN	BHLHB9P1	1	1	-0.231846
chr14	81001166	81001786	81001476	ENSG00000271705.1	-	unprocessed_pseudogene	KNOWN	RPL17P3	1	2	-0.413473
chr14	81003325	81003645	81003485	ENSG00000271656.1	-	processed_pseudogene	KNOWN	RP11-114N19.5	1	1	-0.413473
chr14	81032529	81033404	81032966	ENSG00000259167.2	+	processed_pseudogene	KNOWN	NMNAT1P1	1	1	-0.155318
chr14	81107033	81170414	81138723	ENSG00000258999.1	-	antisense	KNOWN	RP11-114N19.3	1	3	-0.344670
chr14	81175452	81221377	81198414	ENSG00000165417.11	-	protein_coding	KNOWN	GTF2A1	4	10	-0.079715
chr14	81195040	81195148	81195094	ENSG00000273941.1	+	miRNA	NOVEL	AL136040.1	1	1	-0.161392
chr14	81202695	81202834	81202764	ENSG00000221303.1	-	snoRNA	KNOWN	SNORA79	1	1	-0.161392
chr14	81221218	81222460	81221839	ENSG00000273783.1	+	antisense	KNOWN	CTD-2506P8.6	1	2	-0.133183
chr14	81246295	81246563	81246429	ENSG00000205579.3	-	processed_pseudogene	KNOWN	DYNLL1P1	1	1	-0.323046
chr14	81259565	81260239	81259902	ENSG00000270343.1	-	processed_pseudogene	KNOWN	UNGP3	1	1	0.020831
chr14	81260656	81436465	81348560	ENSG00000140022.9	-	protein_coding	KNOWN	STON2	9	8	-0.321621
chr14	81332961	81333361	81333161	ENSG00000242163.1	-	processed_pseudogene	KNOWN	RP11-299L17.1	1	1	-0.385330
chr14	81412970	81413239	81413104	ENSG00000258605.1	+	processed_pseudogene	KNOWN	DYNLL1P2	1	1	-0.254566
chr14	81441987	81450157	81446072	ENSG00000258675.1	-	lincRNA	KNOWN	RP11-299L17.3	1	3	-0.214097
chr14	81471549	81533861	81502705	ENSG00000071537.13	-	protein_coding	KNOWN	SEL1L	6	21	-0.110656
chr14	81605347	81623061	81614204	ENSG00000258977.1	-	lincRNA	KNOWN	LINC01467	1	3	-0.478412
chr14	81661428	81662874	81662151	ENSG00000258841.1	+	processed_pseudogene	KNOWN	EEF1A1P2	1	1	-0.285765
chr14	81727780	81743138	81735459	ENSG00000258718.1	-	lincRNA	KNOWN	RP11-226P1.2	2	3	-0.395414
chr14	81741002	82030349	81885675	ENSG00000259035.1	+	lincRNA	KNOWN	RP11-666E17.1	1	4	-0.425912
chr14	81777016	81777613	81777314	ENSG00000241891.1	-	processed_pseudogene	KNOWN	RP11-226P1.1	1	1	-0.309749
chr14	81916231	81917888	81917059	ENSG00000258501.1	+	processed_pseudogene	KNOWN	EIF3LP1	1	1	-0.425067
chr14	82427420	82427508	82427464	ENSG00000275986.1	-	miRNA	NOVEL	AL357095.1	1	1	-0.595540
chr14	82429872	82430156	82430014	ENSG00000276782.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.660673
chr14	82642620	82706825	82674722	ENSG00000258743.5	+	lincRNA	KNOWN	RP11-406A9.2	4	6	-0.788683
chr14	82692704	82693055	82692879	ENSG00000259032.2	-	processed_pseudogene	KNOWN	ENSAP2	1	1	-0.778240
chr14	82788478	82796221	82792349	ENSG00000258683.1	-	lincRNA	KNOWN	RP11-11K13.1	1	2	-0.485810
chr14	83017106	83018144	83017625	ENSG00000258600.1	-	lincRNA	KNOWN	RP11-452D21.2	1	2	-0.371664
chr14	83018201	83039602	83028901	ENSG00000258426.1	-	lincRNA	KNOWN	RP11-452D21.1	1	2	-0.590870
chr14	83048579	83048640	83048609	ENSG00000252369.1	+	snRNA	KNOWN	RNU7-51P	1	1	-0.860180
chr14	83750384	83750501	83750442	ENSG00000238561.1	+	snRNA	KNOWN	RNU6ATAC28P	1	1	-0.816086
chr14	83805496	83805640	83805568	ENSG00000258549.1	-	processed_pseudogene	KNOWN	RP11-22K10.1	1	1	-0.458822
chr14	83906872	83915050	83910961	ENSG00000258532.1	-	lincRNA	KNOWN	RP11-353P15.1	1	3	-0.545760
chr14	84172841	84173606	84173223	ENSG00000258762.1	+	processed_pseudogene	KNOWN	MTND4P33	1	1	-0.433099
chr14	84173791	84175510	84174650	ENSG00000258923.2	+	processed_pseudogene	KNOWN	MTND5P35	1	1	-0.433099
chr14	84176419	84177088	84176753	ENSG00000259012.2	+	processed_pseudogene	KNOWN	MTCYBP27	1	1	-0.433099
chr14	84739942	84740052	84739997	ENSG00000251895.1	+	snRNA	KNOWN	RNU6-976P	1	1	-0.222882
chr14	84951274	84951373	84951323	ENSG00000258506.2	+	processed_pseudogene	KNOWN	RP11-688D15.1	1	1	-0.793072
chr14	84998278	84999296	84998787	ENSG00000271712.1	-	processed_pseudogene	KNOWN	RP11-688D15.2	1	1	-0.647693
chr14	85202849	85239474	85221161	ENSG00000259044.1	-	lincRNA	KNOWN	RP11-789A21.1	1	3	-0.108509
chr14	85362457	85516934	85439695	ENSG00000258902.1	-	lincRNA	KNOWN	CTD-2128A3.2	1	5	-0.221694
chr14	85387275	85388765	85388020	ENSG00000258814.1	+	lincRNA	KNOWN	CTD-2128A3.3	1	3	-0.447883
chr14	85393879	85420074	85406976	ENSG00000259107.1	+	lincRNA	KNOWN	LINC00911	2	3	-0.296225
chr14	85524432	85529988	85527210	ENSG00000205562.2	-	lincRNA	KNOWN	RP11-497E19.1	1	2	-0.073594
chr14	85528599	85529386	85528992	ENSG00000258945.1	+	lincRNA	KNOWN	RP11-497E19.2	1	2	-0.073594
chr14	85530144	85654426	85592285	ENSG00000185070.10	+	protein_coding	KNOWN	FLRT2	7	5	-0.018897
chr14	85934710	86129778	86032244	ENSG00000258733.5	+	lincRNA	KNOWN	CTD-2341M24.1	3	5	-0.436495
chr14	86014686	86062960	86038823	ENSG00000258912.1	-	lincRNA	KNOWN	RP11-1079H9.1	1	6	-0.413331
chr14	86332376	86401285	86366830	ENSG00000258994.1	+	lincRNA	KNOWN	RP11-26L16.1	1	3	-0.383372
chr14	86905778	86922755	86914266	ENSG00000258804.1	+	lincRNA	KNOWN	RP11-322L20.1	1	5	-0.300054
chr14	86936640	86989125	86962882	ENSG00000259061.1	+	lincRNA	KNOWN	RP11-736P16.1	1	3	-0.613446
chr14	87251103	87251679	87251391	ENSG00000258496.1	+	lincRNA	KNOWN	RP11-1141N12.1	1	2	-0.446677
chr14	87323753	87332390	87328071	ENSG00000258958.1	+	lincRNA	KNOWN	RP11-594C13.2	1	3	-0.426460
chr14	87353070	87573022	87463046	ENSG00000258859.1	-	lincRNA	KNOWN	RP11-594C13.1	1	7	-0.439127
chr14	87568181	87569399	87568790	ENSG00000259028.1	+	lincRNA	KNOWN	RP11-325D8.1	1	3	-0.519938
chr14	87634379	87655294	87644836	ENSG00000258770.1	-	lincRNA	KNOWN	CTD-2007A10.1	1	3	-0.565679
chr14	87710419	87872291	87791355	ENSG00000258807.5	-	lincRNA	KNOWN	RP11-1152H15.1	3	7	-0.310818
chr14	87810982	87838339	87824660	ENSG00000259077.1	+	lincRNA	KNOWN	RP11-804L24.2	1	3	-0.388627
chr14	87837820	87993665	87915742	ENSG00000054983.16	-	protein_coding	KNOWN	GALC	16	17	-0.358152
chr14	87952527	87955203	87953865	ENSG00000259096.1	+	processed_pseudogene	KNOWN	FAM35CP	1	2	-0.208313
chr14	87996345	87996448	87996396	ENSG00000252783.1	-	snRNA	KNOWN	RNU6-835P	1	1	-0.395123
chr14	88005124	88014811	88009967	ENSG00000140030.5	+	protein_coding	KNOWN	GPR65	1	2	-0.372566
chr14	88010787	88015611	88013199	ENSG00000258407.1	-	antisense	KNOWN	RP11-300J18.2	1	3	-0.349714
chr14	88018605	88036319	88027462	ENSG00000258826.5	-	lincRNA	KNOWN	RP11-300J18.1	2	5	-0.387455
chr14	88024550	88097619	88061084	ENSG00000258867.5	+	lincRNA	KNOWN	LINC01146	8	4	-0.443324
chr14	88136733	88159845	88148289	ENSG00000258975.1	-	lincRNA	KNOWN	RP11-753D20.1	1	3	-0.028304
chr14	88158240	88160591	88159415	ENSG00000259998.1	-	lincRNA	KNOWN	RP11-753D20.4	1	1	-0.126648
chr14	88175391	88180198	88177794	ENSG00000258538.5	+	lincRNA	KNOWN	RP11-753D20.3	2	3	-0.008612
chr14	88180103	88326907	88253505	ENSG00000100433.15	-	protein_coding	KNOWN	KCNK10	4	7	-0.120309
chr14	88384924	88470350	88427637	ENSG00000042317.16	+	protein_coding	KNOWN	SPATA7	22	13	-0.229393
chr14	88465778	88554733	88510255	ENSG00000070778.12	-	protein_coding	KNOWN	PTPN21	9	19	0.011922
chr14	88499334	88515502	88507418	ENSG00000258983.2	+	antisense	KNOWN	RP11-507K2.2	1	5	0.037338
chr14	88513498	88513663	88513580	ENSG00000222990.1	+	snRNA	KNOWN	RNU4-22P	1	1	-0.003933
chr14	88551597	88552493	88552045	ENSG00000258789.1	+	antisense	KNOWN	RP11-507K2.3	1	2	0.116104
chr14	88562909	88627596	88595252	ENSG00000100722.18	+	protein_coding	KNOWN	ZC3H14	25	17	0.096414
chr14	88589231	88592408	88590819	ENSG00000278576.1	+	sense_intronic	KNOWN	RP11-507K2.6	1	1	0.155408
chr14	88612431	88792752	88702591	ENSG00000165521.15	-	protein_coding	KNOWN	EML5	8	44	-0.114081
chr14	88819608	88822151	88820879	ENSG00000274492.1	-	lincRNA	KNOWN	RP11-976B16.1	1	1	-0.239852
chr14	88820297	88820432	88820364	ENSG00000200653.1	+	snRNA	KNOWN	RNU4-92P	1	1	-0.239852
chr14	88824153	88881078	88852615	ENSG00000165533.18	+	protein_coding	KNOWN	TTC8	17	16	0.043772
chr14	88840165	88840263	88840214	ENSG00000207342.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.136386
chr14	89110148	89111223	89110685	ENSG00000258990.2	-	processed_pseudogene	KNOWN	MPPE1P1	1	1	0.661152
chr14	89124871	89619149	89372010	ENSG00000053254.15	-	protein_coding	KNOWN	FOXN3	19	7	0.312392
chr14	89156743	89157574	89157158	ENSG00000277801.1	+	lincRNA	KNOWN	RP11-681H18.2	1	1	-0.003692
chr14	89290205	89291594	89290899	ENSG00000259151.2	-	transcribed_processed_pseudogene	KNOWN	CAP2P1	1	1	0.526223
chr14	89350285	89364699	89357492	ENSG00000258752.1	+	antisense	KNOWN	RP11-356K23.1	2	2	0.262833
chr14	89355060	89356571	89355815	ENSG00000258699.1	+	antisense	KNOWN	RP11-356K23.2	1	2	0.262833
chr14	89399995	89409469	89404732	ENSG00000258380.1	+	antisense	KNOWN	RP11-33N16.2	1	2	0.485137
chr14	89412312	89954659	89683485	ENSG00000259053.1	-	processed_transcript	KNOWN	RP11-33N16.3	1	4	0.167843
chr14	89417354	89419793	89418573	ENSG00000258920.1	+	antisense	KNOWN	FOXN3-AS1	1	2	0.334193
chr14	89576216	89577477	89576846	ENSG00000259073.1	+	antisense	KNOWN	FOXN3-AS2	1	1	0.168749
chr14	89585662	89585761	89585711	ENSG00000281485.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.168749
chr14	89621918	89622207	89622062	ENSG00000201027.1	+	misc_RNA	KNOWN	RN7SKP107	1	1	0.322289
chr14	89628921	89642671	89635796	ENSG00000258792.4	-	lincRNA	KNOWN	RP11-944C7.1	3	3	0.070746
chr14	89650793	89650903	89650848	ENSG00000252655.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.026897
chr14	89712511	89712823	89712667	ENSG00000200312.1	+	misc_RNA	KNOWN	RN7SKP255	1	1	0.446000
chr14	89736965	89738391	89737678	ENSG00000259050.2	-	processed_pseudogene	KNOWN	CHORDC2P	1	2	-0.077933
chr14	89794669	89954777	89874723	ENSG00000140025.15	-	protein_coding	KNOWN	EFCAB11	13	9	-0.000127
chr14	89892128	89892443	89892285	ENSG00000230997.5	+	processed_pseudogene	KNOWN	RAB42P1	1	1	-0.209313
chr14	89954939	90044768	89999853	ENSG00000042088.13	+	protein_coding	KNOWN	TDP1	17	18	-0.086842
chr14	90061765	90185857	90123811	ENSG00000152315.4	+	protein_coding	KNOWN	KCNK13	1	2	-0.040583
chr14	90107675	90107995	90107835	ENSG00000258544.1	+	processed_pseudogene	KNOWN	RP11-750I4.2	1	1	-0.242744
chr14	90177222	90177330	90177276	ENSG00000201351.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.106942
chr14	90256495	90275429	90265962	ENSG00000100764.13	+	protein_coding	KNOWN	PSMC1	7	11	0.008445
chr14	90267856	90332137	90299996	ENSG00000119720.17	-	protein_coding	KNOWN	NRDE2	10	14	0.229859
chr14	90366697	90367179	90366938	ENSG00000242571.1	-	processed_pseudogene	KNOWN	RPL21P11	1	1	0.013989
chr14	90381198	90381252	90381225	ENSG00000238758.1	+	miRNA	NOVEL	AL512791.1	1	1	-0.183643
chr14	90383365	90387973	90385669	ENSG00000275198.1	+	lincRNA	KNOWN	RP11-471B22.3	1	1	-0.183643
chr14	90396502	90408261	90402381	ENSG00000198668.10	+	protein_coding	KNOWN	CALM1	16	7	0.216171
chr14	90402523	90405235	90403879	ENSG00000258424.1	-	antisense	KNOWN	RP11-471B22.2	1	2	0.216171
chr14	90452063	90455117	90453590	ENSG00000258678.1	-	lincRNA	KNOWN	RP11-1078H9.1	1	3	0.272113
chr14	90455230	90458905	90457067	ENSG00000233208.5	+	lincRNA	KNOWN	LINC00642	3	4	0.272113
chr14	90489012	90491637	90490324	ENSG00000259789.1	-	lincRNA	KNOWN	RP11-1078H9.6	1	1	0.214662
chr14	90524564	90816479	90670521	ENSG00000165914.14	-	protein_coding	KNOWN	TTC7B	15	20	0.191195
chr14	90565141	90565225	90565183	ENSG00000252748.1	+	miRNA	NOVEL	AL096869.1	1	1	0.623843
chr14	90567495	90569976	90568735	ENSG00000258935.1	+	lincRNA	KNOWN	RP11-1078H9.2	1	2	0.623843
chr14	90642638	90648894	90645766	ENSG00000259163.1	+	antisense	KNOWN	RP11-1078H9.5	2	5	-0.008612
chr14	90675118	90676294	90675706	ENSG00000258437.1	+	antisense	KNOWN	RP11-661G16.1	1	2	0.148575
chr14	90697333	90699374	90698353	ENSG00000258716.1	+	antisense	KNOWN	RP11-661G16.2	1	2	0.065357
chr14	90766531	90766989	90766760	ENSG00000213315.5	+	processed_pseudogene	KNOWN	CTD-3035D6.1	1	1	0.322289
chr14	90822365	90828128	90825246	ENSG00000258884.1	-	lincRNA	KNOWN	CTD-3035D6.2	1	3	0.429387
chr14	90847862	91060636	90954249	ENSG00000100784.9	-	protein_coding	KNOWN	RPS6KA5	8	21	-0.223259
chr14	91060333	91225632	91142982	ENSG00000133943.20	+	protein_coding	KNOWN	C14orf159	35	17	0.064404
chr14	91091077	91091138	91091107	ENSG00000252644.1	+	snRNA	KNOWN	RNU7-30P	1	1	0.018411
chr14	91126425	91126553	91126489	ENSG00000221102.1	+	snoRNA	KNOWN	SNORA11B	1	1	0.026569
chr14	91232532	91253925	91243228	ENSG00000119714.10	-	protein_coding	KNOWN	GPR68	4	3	0.428072
chr14	91242759	91252211	91247485	ENSG00000258875.5	+	processed_transcript	KNOWN	CTD-2547L24.3	2	4	0.430734
chr14	91258299	91259003	91258651	ENSG00000260810.1	+	lincRNA	KNOWN	CTD-2547L24.4	1	1	0.471110
chr14	91271323	91417844	91344583	ENSG00000015133.18	-	protein_coding	KNOWN	CCDC88C	14	30	0.304588
chr14	91333713	91333823	91333768	ENSG00000265856.1	+	miRNA	NOVEL	AL133153.1	1	1	0.187961
chr14	91418266	91421176	91419721	ENSG00000258798.1	+	lincRNA	KNOWN	RP11-895M11.3	1	2	0.390515
chr14	91419449	91419751	91419600	ENSG00000258446.1	+	processed_pseudogene	KNOWN	RP11-895M11.2	1	1	0.390515
chr14	91457611	91510554	91484082	ENSG00000100796.17	-	protein_coding	KNOWN	PPP4R3A	12	15	-0.149245
chr14	91554410	91554503	91554456	ENSG00000278342.1	+	unprocessed_pseudogene	KNOWN	RP11-248B24.5	1	1	-0.184069
chr14	91572444	91575271	91573857	ENSG00000279286.2	-	TEC	KNOWN	RP11-248B24.1	2	1	-0.061921
chr14	91580696	91780707	91680701	ENSG00000133962.7	-	protein_coding	KNOWN	CATSPERB	8	27	-0.345897
chr14	91603173	91603433	91603303	ENSG00000268295.1	-	transcribed_processed_pseudogene	KNOWN	POLR3GP1	1	1	-0.250012
chr14	91604402	91605319	91604860	ENSG00000258774.1	-	transcribed_processed_pseudogene	KNOWN	NANOGP7	1	1	-0.250012
chr14	91709111	91710617	91709864	ENSG00000258962.2	+	processed_pseudogene	KNOWN	RP11-747H7.1	1	2	-0.562779
chr14	91714915	91715130	91715022	ENSG00000275154.1	-	snoRNA	NOVEL	U3	1	1	-0.551864
chr14	91752856	91759798	91756327	ENSG00000260711.2	-	sense_intronic	KNOWN	RP11-747H7.3	1	1	-0.384107
chr14	91779751	91867536	91823643	ENSG00000165929.12	-	protein_coding	KNOWN	TC2N	7	12	-0.480220
chr14	91869412	91947987	91908699	ENSG00000140092.14	-	protein_coding	KNOWN	FBLN5	9	12	0.292446
chr14	91965991	92040896	92003443	ENSG00000100815.12	-	protein_coding	KNOWN	TRIP11	5	21	-0.049719
chr14	92026566	92026887	92026726	ENSG00000259020.3	+	processed_pseudogene	KNOWN	RP11-529H20.3	1	1	-0.008702
chr14	92038652	92106621	92072636	ENSG00000066427.21	-	protein_coding	KNOWN	ATXN3	53	13	0.336448
chr14	92070230	92071042	92070636	ENSG00000279963.1	+	protein_coding	KNOWN	AL049872.1	1	2	0.350304
chr14	92116122	92121917	92119019	ENSG00000183648.9	-	protein_coding	KNOWN	NDUFB1	7	4	0.369977
chr14	92121937	92172145	92147041	ENSG00000165934.12	+	protein_coding	KNOWN	CPSF2	5	16	0.159737
chr14	92253493	92263656	92258574	ENSG00000258481.1	-	lincRNA	KNOWN	RP11-472N19.3	1	2	0.084724
chr14	92265702	92265807	92265754	ENSG00000201097.1	+	snRNA	KNOWN	RNU6-366P	1	1	0.084724
chr14	92322581	92501483	92412032	ENSG00000140090.17	+	protein_coding	KNOWN	SLC24A4	8	18	0.232595
chr14	92513774	92688994	92601384	ENSG00000100599.15	+	protein_coding	KNOWN	RIN3	12	11	0.419964
chr14	92703807	92748702	92726254	ENSG00000100600.14	-	protein_coding	KNOWN	LGMN	19	15	0.406605
chr14	92794231	92839963	92817097	ENSG00000066455.12	+	protein_coding	KNOWN	GOLGA5	3	13	0.177786
chr14	92886352	92893506	92889929	ENSG00000258742.5	+	lincRNA	KNOWN	RP11-862G15.1	4	3	0.158218
chr14	92905697	92907482	92906589	ENSG00000258499.1	-	lincRNA	KNOWN	RP11-862G15.2	1	2	0.334848
chr14	92923080	92935293	92929186	ENSG00000100604.12	+	protein_coding	KNOWN	CHGA	6	8	0.451625
chr14	92936914	93116320	93026617	ENSG00000100605.16	-	protein_coding	KNOWN	ITPK1	12	11	0.592780
chr14	93067452	93072152	93069802	ENSG00000258730.1	+	antisense	KNOWN	ITPK1-AS1	1	1	0.447271
chr14	93138066	93138465	93138265	ENSG00000258595.2	+	processed_pseudogene	KNOWN	RP11-371E8.2	1	1	0.313206
chr14	93182196	93184928	93183562	ENSG00000165943.4	-	protein_coding	KNOWN	MOAP1	2	3	0.230375
chr14	93184951	93187089	93186020	ENSG00000153485.5	+	protein_coding	KNOWN	TMEM251	2	2	0.230375
chr14	93184973	93218586	93201779	ENSG00000259066.5	+	protein_coding	KNOWN	RP11-371E8.4	3	7	0.032995
chr14	93202894	93207094	93204994	ENSG00000170270.4	-	protein_coding	KNOWN	C14orf142	2	2	-0.087558
chr14	93207056	93229215	93218135	ENSG00000012963.13	+	protein_coding	KNOWN	UBR7	8	11	0.160291
chr14	93223598	93224139	93223868	ENSG00000240096.1	-	processed_pseudogene	KNOWN	RP11-85G20.1	1	1	0.198250
chr14	93237550	93333092	93285321	ENSG00000011114.14	-	protein_coding	KNOWN	BTBD7	8	11	0.008241
chr14	93244010	93244323	93244166	ENSG00000241499.1	+	processed_pseudogene	KNOWN	RP11-85G20.2	1	1	0.054124
chr14	93333219	93707876	93520547	ENSG00000133958.13	+	protein_coding	KNOWN	UNC79	6	51	-0.275998
chr14	93334528	93335057	93334792	ENSG00000278396.1	+	sense_intronic	KNOWN	RP11-120E11.2	1	1	0.293626
chr14	93347191	93348356	93347773	ENSG00000187581.2	+	protein_coding	KNOWN	COX8C	1	2	0.293626
chr14	93397139	93397234	93397186	ENSG00000202306.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.183643
chr14	93437400	93437510	93437455	ENSG00000252720.1	-	snRNA	KNOWN	RNU6-1258P	1	1	-0.520985
chr14	93637179	93637338	93637258	ENSG00000277826.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.198401
chr14	93718298	93788481	93753389	ENSG00000175785.12	-	protein_coding	KNOWN	PRIMA1	4	6	0.162781
chr14	93895762	93897759	93896760	ENSG00000279593.1	+	TEC	KNOWN	RP11-131H24.5	1	1	0.034767
chr14	93904730	93927066	93915898	ENSG00000258584.1	-	antisense	KNOWN	FAM181A-AS1	4	11	0.098907
chr14	93918894	93929608	93924251	ENSG00000140067.6	+	protein_coding	KNOWN	FAM181A	5	3	0.118709
chr14	93934153	93976791	93955472	ENSG00000100628.11	-	protein_coding	KNOWN	ASB2	10	10	0.341325
chr14	93939555	93944129	93941842	ENSG00000258987.1	+	antisense	KNOWN	RP11-131H24.4	1	5	0.279619
chr14	93948226	93948302	93948264	ENSG00000265768.1	-	miRNA	KNOWN	MIR4506	1	1	0.279619
chr14	93997270	94008863	94003066	ENSG00000175699.12	+	lincRNA	KNOWN	LINC00521	4	9	0.310297
chr14	94026329	94048930	94037629	ENSG00000089723.9	+	protein_coding	KNOWN	OTUB2	2	6	0.546427
chr14	94048291	94081245	94064768	ENSG00000089737.15	-	protein_coding	KNOWN	DDX24	10	10	0.383417
chr14	94081282	94103846	94092564	ENSG00000165948.10	+	protein_coding	KNOWN	IFI27L1	13	6	-0.000138
chr14	94104836	94116698	94110767	ENSG00000165949.12	+	protein_coding	KNOWN	IFI27	15	6	0.201222
chr14	94127779	94130253	94129016	ENSG00000119632.3	-	protein_coding	KNOWN	IFI27L2	6	4	0.402614
chr14	94146128	94279735	94212931	ENSG00000119698.11	+	protein_coding	KNOWN	PPP4R4	6	25	-0.280896
chr14	94280455	94293271	94286863	ENSG00000140093.9	-	protein_coding	KNOWN	SERPINA10	4	5	-0.265464
chr14	94304248	94323394	94313821	ENSG00000170099.5	-	protein_coding	KNOWN	SERPINA6	3	5	0.025626
chr14	94364313	94366698	94365505	ENSG00000258597.3	-	polymorphic_pseudogene	KNOWN	SERPINA2	1	2	-0.247214
chr14	94376747	94390693	94383720	ENSG00000197249.12	-	protein_coding	KNOWN	SERPINA1	19	7	0.194286
chr14	94430633	94464730	94447681	ENSG00000256357.1	+	antisense	KNOWN	RP11-349I1.2	1	3	-0.118307
chr14	94442464	94452790	94447627	ENSG00000186910.3	-	protein_coding	KNOWN	SERPINA11	1	5	-0.119246
chr14	94462717	94479689	94471203	ENSG00000170054.14	-	protein_coding	KNOWN	SERPINA9	8	6	-0.108537
chr14	94487274	94517844	94502559	ENSG00000165953.9	-	protein_coding	KNOWN	SERPINA12	2	6	-0.055803
chr14	94561091	94569913	94565502	ENSG00000100665.11	+	protein_coding	KNOWN	SERPINA4	3	5	-0.045512
chr14	94561442	94593120	94577281	ENSG00000188488.13	+	protein_coding	KNOWN	SERPINA5	13	7	-0.040105
chr14	94592058	94624646	94608352	ENSG00000273259.2	+	protein_coding	KNOWN	SERPINA3	2	8	0.117534
chr14	94612384	94624055	94618219	ENSG00000196136.16	+	protein_coding	KNOWN	SERPINA3	8	5	0.050373
chr14	94633705	94634524	94634114	ENSG00000258805.1	+	processed_pseudogene	KNOWN	ADIPOR1P2	1	1	0.004085
chr14	94640725	94646994	94643859	ENSG00000187483.9	+	transcribed_unprocessed_pseudogene	KNOWN	SERPINA13P	2	5	0.004085
chr14	94674877	94675829	94675353	ENSG00000259140.2	-	processed_pseudogene	KNOWN	RP11-986E7.2	1	2	0.016704
chr14	94726288	94727175	94726731	ENSG00000239269.1	+	processed_pseudogene	KNOWN	RPSAP4	1	1	-0.050809
chr14	94768216	94770230	94769223	ENSG00000133937.4	-	protein_coding	KNOWN	GSC	1	3	-0.127064
chr14	94800849	94801463	94801156	ENSG00000240914.1	-	processed_pseudogene	KNOWN	RPL15P2	1	1	0.005577
chr14	94918253	94918734	94918493	ENSG00000274379.1	-	lincRNA	KNOWN	RP11-179A9.3	1	1	0.156441
chr14	94960277	94962976	94961626	ENSG00000258933.1	-	lincRNA	KNOWN	RP11-991C1.1	1	5	-0.205552
chr14	95048220	95050953	95049586	ENSG00000258866.1	+	lincRNA	KNOWN	RP11-991C1.2	1	2	0.111220
chr14	95086228	95158010	95122119	ENSG00000100697.14	-	protein_coding	KNOWN	DICER1	15	29	-0.095692
chr14	95137919	95137986	95137952	ENSG00000264607.1	-	miRNA	KNOWN	MIR3173	1	1	-0.043892
chr14	95157645	95179933	95168789	ENSG00000235706.7	+	antisense	KNOWN	DICER1-AS1	4	4	-0.168276
chr14	95181940	95319906	95250923	ENSG00000165959.11	-	protein_coding	KNOWN	CLMN	9	13	0.003318
chr14	95185117	95185854	95185485	ENSG00000259143.1	-	sense_overlapping	KNOWN	CTD-2240H23.2	1	2	-0.220221
chr14	95199039	95199345	95199192	ENSG00000258615.1	+	unprocessed_pseudogene	KNOWN	RP11-725G5.3	1	2	0.034767
chr14	95329584	95335504	95332544	ENSG00000258630.1	+	lincRNA	KNOWN	RP11-725G5.2	1	3	0.142605
chr14	95335840	95335943	95335891	ENSG00000276090.1	+	miRNA	NOVEL	AL117187.1	1	1	0.133611
chr14	95407266	95475836	95441551	ENSG00000176438.12	-	protein_coding	KNOWN	SYNE3	5	17	0.351736
chr14	95516136	95517911	95517023	ENSG00000258572.1	+	lincRNA	KNOWN	RP11-1070N10.3	1	2	0.679902
chr14	95532297	95534872	95533584	ENSG00000247092.6	-	antisense	KNOWN	SNHG10	4	2	0.384443
chr14	95533355	95533629	95533492	ENSG00000252481.1	-	scaRNA	KNOWN	SCARNA13	1	1	0.384443
chr14	95533503	95544724	95539113	ENSG00000182512.4	+	protein_coding	KNOWN	GLRX5	3	2	0.384443
chr14	95573562	95581956	95577759	ENSG00000258390.1	+	lincRNA	KNOWN	RP11-1070N10.4	2	3	0.265821
chr14	95620914	95643285	95632099	ENSG00000258927.1	+	lincRNA	KNOWN	RP11-1070N10.5	1	4	0.030646
chr14	95644508	95645232	95644870	ENSG00000270038.1	+	lincRNA	KNOWN	RP11-1070N10.7	1	1	-0.042458
chr14	95650498	95679833	95665165	ENSG00000187621.14	+	processed_transcript	KNOWN	TCL6	13	9	0.070218
chr14	95662480	95662598	95662539	ENSG00000275033.1	+	misc_RNA	NOVEL	TCL6_2	1	1	-0.024653
chr14	95663256	95692630	95677943	ENSG00000259084.6	+	sense_overlapping	KNOWN	RP11-1070N10.6	4	8	0.168141
chr14	95670441	95670577	95670509	ENSG00000277468.1	+	misc_RNA	NOVEL	TCL6_3	1	1	0.258350
chr14	95686417	95692643	95689530	ENSG00000213231.12	+	protein_coding	KNOWN	TCL1B	3	4	0.138663
chr14	95709967	95714196	95712081	ENSG00000100721.10	-	protein_coding	KNOWN	TCL1A	9	5	-0.111873
chr14	95711747	95757656	95734701	ENSG00000257275.6	+	antisense	KNOWN	RP11-164H13.1	3	3	-0.221533
chr14	95851481	95851590	95851535	ENSG00000263357.1	-	miRNA	NOVEL	AL133167.1	1	1	-0.214111
chr14	95855548	95866464	95861006	ENSG00000258516.1	-	lincRNA	KNOWN	RP11-185P18.2	2	2	-0.214111
chr14	95876392	95925571	95900981	ENSG00000250366.2	+	lincRNA	KNOWN	TUNAR	3	3	-0.013566
chr14	95973435	95973502	95973468	ENSG00000278166.1	-	miRNA	NOVEL	AL133167.2	1	1	-0.105948
chr14	96019484	96019765	96019624	ENSG00000271358.1	+	processed_pseudogene	KNOWN	RP11-241N4.2	1	1	-0.124632
chr14	96039324	96094080	96066702	ENSG00000227051.5	+	lincRNA	KNOWN	C14orf132	4	3	0.334178
chr14	96136851	96136943	96136897	ENSG00000221236.2	+	miRNA	NOVEL	AL137190.1	1	1	0.252456
chr14	96204679	96244166	96224422	ENSG00000168398.6	+	protein_coding	KNOWN	BDKRB2	3	4	0.445208
chr14	96204844	96263929	96234386	ENSG00000258691.1	+	protein_coding	KNOWN	RP11-404P21.8	2	4	0.445317
chr14	96210860	96214818	96212839	ENSG00000258412.1	+	sense_intronic	KNOWN	RP11-404P21.5	1	2	0.453666
chr14	96223108	96223347	96223227	ENSG00000258788.3	+	processed_pseudogene	KNOWN	RP11-404P21.9	1	1	0.453666
chr14	96233431	96234101	96233766	ENSG00000259036.1	-	antisense	KNOWN	RP11-404P21.1	1	2	0.468007
chr14	96255824	96268967	96262395	ENSG00000100739.10	+	protein_coding	KNOWN	BDKRB1	4	5	0.435026
chr14	96259411	96268624	96264017	ENSG00000258793.1	-	antisense	KNOWN	RP11-404P21.3	1	2	0.435026
chr14	96275046	96276723	96275884	ENSG00000258729.2	-	lincRNA	KNOWN	RP11-404P21.6	2	1	0.516343
chr14	96279202	96363870	96321536	ENSG00000066739.11	-	protein_coding	KNOWN	ATG2B	7	42	-0.071673
chr14	96363452	96387288	96375370	ENSG00000100744.14	+	protein_coding	KNOWN	GSKIP	7	4	0.026563
chr14	96384624	96384815	96384719	ENSG00000222276.1	+	snRNA	KNOWN	RNU2-33P	1	1	0.099409
chr14	96392111	96489427	96440769	ENSG00000140057.8	+	protein_coding	KNOWN	AK7	5	18	0.242371
chr14	96423700	96424209	96423954	ENSG00000259059.1	-	processed_pseudogene	KNOWN	PEBP1P1	1	1	0.114832
chr14	96456576	96457041	96456808	ENSG00000240051.1	-	processed_pseudogene	KNOWN	RPL23AP10	1	1	0.396846
chr14	96500810	96502321	96501565	ENSG00000260806.1	-	antisense	KNOWN	RP11-872J21.3	1	1	-0.441043
chr14	96501433	96567111	96534272	ENSG00000090060.17	+	protein_coding	KNOWN	PAPOLA	25	22	-0.151362
chr14	96537170	96537904	96537537	ENSG00000276182.1	+	sense_intronic	KNOWN	RP11-872J21.5	1	1	-0.079120
chr14	96592733	96595762	96594247	ENSG00000258702.1	+	lincRNA	KNOWN	RP11-433J8.1	2	3	0.274322
chr14	96638187	96638514	96638350	ENSG00000223299.1	-	misc_RNA	KNOWN	RN7SKP108	1	1	0.247410
chr14	96741191	96790613	96765902	ENSG00000258979.1	+	lincRNA	KNOWN	RP11-433J8.2	1	4	0.154647
chr14	96797304	96931722	96864513	ENSG00000100749.7	+	protein_coding	KNOWN	VRK1	7	13	-0.110890
chr14	96931367	96943580	96937473	ENSG00000258825.1	+	processed_transcript	KNOWN	AL133168.3	1	2	0.062845
chr14	96943579	96945394	96944486	ENSG00000225163.3	+	lincRNA	KNOWN	LINC00618	2	3	0.062845
chr14	96992864	96996601	96994732	ENSG00000280070.1	+	TEC	KNOWN	RP11-907D1.3	1	1	-0.041275
chr14	97110416	97119247	97114831	ENSG00000259026.1	-	lincRNA	KNOWN	RP11-907D1.1	2	4	0.121893
chr14	97116355	97121501	97118928	ENSG00000258393.1	+	lincRNA	KNOWN	RP11-907D1.2	1	4	0.121893
chr14	97154857	97158736	97156796	ENSG00000259110.1	+	lincRNA	KNOWN	RP11-359N5.1	1	2	0.146440
chr14	97458816	97581601	97520208	ENSG00000246084.2	+	lincRNA	KNOWN	CTD-2506J14.1	3	5	-0.179972
chr14	97523095	97523230	97523162	ENSG00000281689.1	+	miRNA	NOVEL	AL355098.1	1	1	-0.229936
chr14	97632647	97686658	97659652	ENSG00000197176.7	-	lincRNA	KNOWN	RP11-76E12.1	3	4	-0.137904
chr14	97749264	97763989	97756626	ENSG00000258869.1	-	lincRNA	KNOWN	RP11-204N11.1	2	2	-0.321614
chr14	97786565	97789256	97787910	ENSG00000258379.1	-	lincRNA	KNOWN	RP11-204N11.2	1	2	-0.029570
chr14	97925610	97978124	97951867	ENSG00000246223.8	-	lincRNA	KNOWN	LINC01550	6	4	-0.327470
chr14	98068240	98205143	98136691	ENSG00000259097.1	-	lincRNA	KNOWN	RP11-61O1.1	1	3	-0.272982
chr14	98136074	98139242	98137658	ENSG00000258511.1	+	lincRNA	KNOWN	RP11-61O1.2	1	2	-0.218937
chr14	98331632	98331750	98331691	ENSG00000222066.1	-	miRNA	NOVEL	AL163760.1	1	1	-0.411177
chr14	98351367	98351664	98351515	ENSG00000241757.3	-	misc_RNA	KNOWN	RN7SL714P	1	1	-0.169548
chr14	98497132	98514798	98505965	ENSG00000258795.1	+	lincRNA	KNOWN	RP11-1082A3.1	1	3	-0.799443
chr14	98711613	98717761	98714687	ENSG00000176605.7	+	protein_coding	KNOWN	C14orf177	3	4	-0.238760
chr14	98844896	98845597	98845246	ENSG00000237342.1	+	lincRNA	KNOWN	AL132796.1	1	3	-0.236631
chr14	98916902	98917801	98917351	ENSG00000278990.1	-	TEC	KNOWN	RP11-1127D7.2	1	1	0.248717
chr14	98925137	98927805	98926471	ENSG00000259119.1	-	lincRNA	KNOWN	RP11-1127D7.1	1	2	0.248717
chr14	98972879	98973301	98973090	ENSG00000232573.1	-	processed_pseudogene	KNOWN	RPL3P4	1	1	-0.009453
chr14	98973314	98973471	98973392	ENSG00000234648.1	+	processed_pseudogene	KNOWN	AL162151.3	1	1	-0.009453
chr14	99158416	99159669	99159042	ENSG00000229402.1	+	antisense	KNOWN	AL162151.4	1	2	-0.408082
chr14	99169287	99271524	99220405	ENSG00000127152.17	-	protein_coding	KNOWN	BCL11B	3	4	0.202649
chr14	99262948	99264735	99263841	ENSG00000235785.1	+	antisense	KNOWN	AL109767.1	1	3	0.189458
chr14	99324799	99332015	99328407	ENSG00000258383.1	-	lincRNA	KNOWN	CTD-2200A16.1	1	2	-0.101981
chr14	99397746	99480889	99439317	ENSG00000183576.12	-	protein_coding	KNOWN	SETD3	9	13	0.150827
chr14	99444306	99444412	99444359	ENSG00000272439.1	+	snRNA	KNOWN	RNU6-91P	1	1	0.380753
chr14	99481169	99535044	99508106	ENSG00000090061.17	+	protein_coding	KNOWN	CCNK	9	11	0.455982
chr14	99500180	99604026	99552103	ENSG00000205476.8	-	protein_coding	KNOWN	CCDC85C	7	6	0.871137
chr14	99512501	99513576	99513038	ENSG00000258749.1	+	antisense	KNOWN	RP11-688G15.3	1	2	0.797132
chr14	99583017	99583118	99583067	ENSG00000200506.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.041527
chr14	99604556	99625740	99615148	ENSG00000247970.2	+	lincRNA	KNOWN	RP11-543C4.1	1	2	0.674303
chr14	99645110	99680569	99662839	ENSG00000182218.9	+	protein_coding	KNOWN	HHIPL1	2	9	0.636899
chr14	99684304	99727301	99705802	ENSG00000036530.8	+	protein_coding	KNOWN	CYP46A1	7	15	0.326951
chr14	99691445	99693648	99692546	ENSG00000258672.1	-	lincRNA	KNOWN	RP11-543C4.3	1	3	0.186035
chr14	99737693	99942060	99839876	ENSG00000066629.16	+	protein_coding	KNOWN	EML1	20	23	0.371493
chr14	99945315	99945477	99945396	ENSG00000199836.1	+	snRNA	KNOWN	RNU1-47P	1	1	0.553042
chr14	99964529	99965378	99964953	ENSG00000271198.1	+	processed_pseudogene	KNOWN	VDAC3P1	1	1	0.603638
chr14	99971449	100144236	100057842	ENSG00000196405.12	+	protein_coding	KNOWN	EVL	24	14	0.461667
chr14	99974336	99975149	99974742	ENSG00000242888.1	-	processed_pseudogene	KNOWN	RP11-436M15.1	1	1	0.533067
chr14	99977115	99978098	99977606	ENSG00000258693.1	-	lincRNA	KNOWN	RP11-436M15.3	1	2	0.533067
chr14	100052803	100074878	100063840	ENSG00000258560.1	-	antisense	KNOWN	CTD-2376I20.1	1	2	0.315745
chr14	100109419	100109514	100109466	ENSG00000265154.1	-	miRNA	KNOWN	MIR151B	1	1	0.308415
chr14	100109655	100109753	100109704	ENSG00000199082.1	+	miRNA	KNOWN	MIR342	1	1	0.308415
chr14	100143957	100160163	100152060	ENSG00000168350.7	-	protein_coding	KNOWN	DEGS2	3	3	0.735090
chr14	100207407	100238555	100222981	ENSG00000258982.1	-	antisense	KNOWN	RP11-638I2.4	1	2	0.587957
chr14	100238298	100282792	100260545	ENSG00000100811.10	+	protein_coding	KNOWN	YY1	6	5	0.472606
chr14	100263781	100265405	100264593	ENSG00000258904.1	+	sense_intronic	KNOWN	RP11-638I2.2	1	2	0.739475
chr14	100279959	100291456	100285707	ENSG00000259052.1	-	sense_overlapping	KNOWN	AL157871.2	1	2	0.332339
chr14	100291111	100306547	100298829	ENSG00000197119.12	-	protein_coding	KNOWN	SLC25A29	20	5	0.505159
chr14	100291117	100294656	100292886	ENSG00000258504.2	+	lincRNA	KNOWN	RP11-638I2.6	2	2	0.505159
chr14	100307859	100307956	100307907	ENSG00000198984.1	+	miRNA	KNOWN	MIR345	1	1	0.505159
chr14	100319073	100319370	100319221	ENSG00000243976.2	-	misc_RNA	KNOWN	RN7SL523P	1	1	0.895403
chr14	100322828	100322933	100322880	ENSG00000263519.1	-	miRNA	NOVEL	AL157871.1	1	1	0.895403
chr14	100323337	100330378	100326857	ENSG00000140107.10	+	protein_coding	KNOWN	SLC25A47	2	6	0.894432
chr14	100333788	100376805	100355296	ENSG00000140105.17	-	protein_coding	KNOWN	WARS	44	12	0.728786
chr14	100333790	100354061	100343925	ENSG00000258666.1	+	antisense	KNOWN	RP11-638I2.8	1	2	0.838281
chr14	100339832	100340554	100340193	ENSG00000258521.1	+	antisense	KNOWN	RP11-638I2.9	1	2	0.877358
chr14	100366628	100366920	100366774	ENSG00000258581.2	+	processed_pseudogene	KNOWN	RP11-638I2.10	1	1	0.682348
chr14	100376418	100530303	100453360	ENSG00000176473.13	+	protein_coding	KNOWN	WDR25	11	7	0.392961
chr14	100406599	100407613	100407106	ENSG00000258620.1	+	sense_intronic	KNOWN	RP11-362L22.1	2	3	0.619377
chr14	100480952	100481274	100481113	ENSG00000258500.2	+	transcribed_processed_pseudogene	KNOWN	CTD-2062F14.2	1	1	0.382893
chr14	100487544	100487787	100487665	ENSG00000253075.1	+	misc_RNA	KNOWN	RN7SKP92	1	1	0.382893
chr14	100537149	100587413	100562281	ENSG00000183092.15	-	protein_coding	KNOWN	BEGAIN	10	7	0.996534
chr14	100538939	100540409	100539674	ENSG00000259031.1	+	lincRNA	KNOWN	CTD-2062F14.3	1	2	0.952717
chr14	100587775	100589326	100588550	ENSG00000258576.1	-	sense_overlapping	KNOWN	CTD-2644I21.1	1	2	0.967265
chr14	100657250	100676069	100666659	ENSG00000196273.7	+	lincRNA	KNOWN	LINC00523	6	4	0.769850
chr14	100675930	100679884	100677907	ENSG00000258717.1	-	lincRNA	KNOWN	RP11-566J3.2	1	2	0.742602
chr14	100725705	100738224	100731964	ENSG00000185559.13	+	protein_coding	KNOWN	DLK1	5	6	0.916581
chr14	100779410	100861031	100820220	ENSG00000214548.14	+	lincRNA	KNOWN	MEG3	27	9	0.634440
chr14	100814491	100814574	100814532	ENSG00000266461.1	+	miRNA	KNOWN	MIR2392	1	1	0.688095
chr14	100816041	100816244	100816142	ENSG00000275161.1	+	misc_RNA	NOVEL	Mico1	1	1	0.688095
chr14	100826284	100826370	100826327	ENSG00000274884.1	+	misc_RNA	NOVEL	MEG3_1	1	1	0.688095
chr14	100829350	100829454	100829402	ENSG00000276919.1	+	misc_RNA	NOVEL	MEG3_2	1	1	0.688095
chr14	100834432	100861026	100847729	ENSG00000258663.1	-	antisense	KNOWN	RP11-123M6.2	1	2	0.649761
chr14	100852390	100852487	100852438	ENSG00000211574.1	+	miRNA	KNOWN	MIR770	1	1	0.443667
chr14	100869055	100869164	100869109	ENSG00000207989.2	+	miRNA	KNOWN	MIR493	1	1	0.443667
chr14	100874495	100874603	100874549	ENSG00000199151.2	+	miRNA	KNOWN	MIR337	1	1	0.889729
chr14	100880655	100884847	100882751	ENSG00000254656.1	-	protein_coding	KNOWN	RTL1	1	1	0.889729
chr14	100881007	100881120	100881063	ENSG00000208001.1	+	miRNA	KNOWN	MIR431	1	1	0.889729
chr14	100881883	100882006	100881944	ENSG00000207569.1	+	miRNA	KNOWN	MIR433	1	1	0.889729
chr14	100882965	100883075	100883020	ENSG00000207608.2	+	miRNA	KNOWN	MIR127	1	1	0.889729
chr14	100884483	100884576	100884529	ENSG00000272458.1	+	miRNA	KNOWN	MIR432	1	1	0.889729
chr14	100884697	100884788	100884742	ENSG00000207942.1	+	miRNA	KNOWN	MIR136	1	1	0.889729
chr14	100894770	100935999	100915384	ENSG00000258399.6	+	lincRNA	KNOWN	MEG8	7	7	0.422227
chr14	100894817	100894913	100894865	ENSG00000276225.1	+	misc_RNA	NOVEL	MEG8_1	1	1	0.489956
chr14	100897920	100897996	100897958	ENSG00000275662.1	+	snoRNA	KNOWN	SNORD112	1	1	0.489956
chr14	100898958	100899079	100899018	ENSG00000275134.1	+	misc_RNA	NOVEL	MEG8_2	1	1	0.489956
chr14	100903597	100903716	100903656	ENSG00000221077.1	+	miRNA	NOVEL	AL117190.1	1	1	0.489956
chr14	100911166	100911275	100911220	ENSG00000199005.3	+	miRNA	KNOWN	MIR370	1	1	0.526569
chr14	100924824	100924892	100924858	ENSG00000202191.1	+	snoRNA	KNOWN	SNORD113-1	1	1	0.526569
chr14	100927342	100927413	100927377	ENSG00000212384.1	+	snoRNA	KNOWN	SNORD113-2	1	1	0.526569
chr14	100929919	100929990	100929954	ENSG00000201700.3	+	snoRNA	KNOWN	SNORD113-3	1	1	0.526569
chr14	100936491	100936565	100936528	ENSG00000201672.1	+	snoRNA	KNOWN	SNORD113-4	1	1	-0.097486
chr14	100937401	100960199	100948800	ENSG00000225746.8	+	lincRNA	KNOWN	SNHG23	9	8	-0.293698
chr14	100938187	100938264	100938225	ENSG00000272474.1	+	snoRNA	KNOWN	SNORD113-5	1	1	-0.097486
chr14	100939556	100939630	100939593	ENSG00000200215.3	+	snoRNA	KNOWN	SNORD113-6	1	1	-0.097486
chr14	100941126	100941202	100941164	ENSG00000200632.1	+	snoRNA	KNOWN	SNORD113-7	1	1	-0.097486
chr14	100943451	100943524	100943487	ENSG00000200367.1	+	snoRNA	KNOWN	SNORD113-8	1	1	-0.097486
chr14	100945649	100945720	100945684	ENSG00000201950.1	+	snoRNA	KNOWN	SNORD113-9	1	1	-0.097486
chr14	100949833	100949904	100949868	ENSG00000199575.1	+	snoRNA	KNOWN	SNORD114-1	1	1	-0.097486
chr14	100951856	100951933	100951894	ENSG00000200823.1	+	snoRNA	KNOWN	SNORD114-2	1	1	-0.536039
chr14	100953349	100953423	100953386	ENSG00000201839.1	+	snoRNA	KNOWN	SNORD114-3	1	1	-0.536039
chr14	100954374	100954448	100954411	ENSG00000200832.1	+	snoRNA	KNOWN	SNORD114-4	1	1	-0.536039
chr14	100955370	100955439	100955404	ENSG00000199798.1	+	snoRNA	KNOWN	SNORD114-5	1	1	-0.536039
chr14	100956240	100956312	100956276	ENSG00000200150.1	+	snoRNA	NOVEL	SNORD113	1	1	-0.536039
chr14	100957166	100957237	100957201	ENSG00000201263.1	+	snoRNA	KNOWN	SNORD114-6	1	1	-0.536039
chr14	100960509	100967040	100963774	ENSG00000232018.4	+	lincRNA	KNOWN	AL132709.8	2	4	-0.536039
chr14	100963054	100963130	100963092	ENSG00000199390.1	+	snoRNA	KNOWN	SNORD114-7	1	1	-0.536039
chr14	100966029	100966100	100966064	ENSG00000201240.1	+	snoRNA	KNOWN	SNORD114-9	1	1	-0.536039
chr14	100967052	100967123	100967087	ENSG00000200279.1	+	snoRNA	KNOWN	SNORD114-10	1	1	-0.536039
chr14	100967652	100987280	100977466	ENSG00000271417.2	+	lincRNA	KNOWN	SNHG24	1	12	-0.152714
chr14	100968111	100968185	100968148	ENSG00000200608.1	+	snoRNA	KNOWN	SNORD114-11	1	1	-0.536039
chr14	100968948	100969022	100968985	ENSG00000202270.1	+	snoRNA	KNOWN	SNORD114-12	1	1	-0.536039
chr14	100969879	100969952	100969915	ENSG00000201247.1	+	snoRNA	KNOWN	SNORD114-13	1	1	-0.536039
chr14	100972103	100972177	100972140	ENSG00000199593.1	+	snoRNA	KNOWN	SNORD114-14	1	1	-0.100653
chr14	100972670	100972741	100972705	ENSG00000201557.1	+	snoRNA	KNOWN	SNORD114-15	1	1	-0.100653
chr14	100973595	100973664	100973629	ENSG00000199914.1	+	snoRNA	KNOWN	SNORD114-16	1	1	-0.100653
chr14	100974806	100974880	100974843	ENSG00000201569.1	+	snoRNA	KNOWN	SNORD114-17	1	1	-0.100653
chr14	100975825	100975896	100975860	ENSG00000202142.1	+	snoRNA	KNOWN	SNORD114-18	1	1	-0.100653
chr14	100976477	100976551	100976514	ENSG00000199942.1	+	snoRNA	KNOWN	SNORD114-19	1	1	-0.100653
chr14	100977389	100977466	100977427	ENSG00000201500.1	+	snoRNA	NOVEL	SNORD113	1	1	-0.100653
chr14	100979002	100979090	100979046	ENSG00000201036.1	+	snoRNA	NOVEL	SNORD113	1	1	-0.100653
chr14	100979992	100980066	100980029	ENSG00000201710.1	+	snoRNA	NOVEL	SNORD113	1	1	-0.100653
chr14	100981004	100981075	100981039	ENSG00000202048.1	+	snoRNA	KNOWN	SNORD114-20	1	1	-0.100653
chr14	100981975	100982046	100982010	ENSG00000272344.1	+	snoRNA	KNOWN	SNORD114-21	1	1	-0.100653
chr14	100982926	100982997	100982961	ENSG00000202293.1	+	snoRNA	KNOWN	SNORD114-22	1	1	-0.100653
chr14	100983876	100983947	100983911	ENSG00000200406.1	+	snoRNA	KNOWN	SNORD114-23	1	1	-0.100653
chr14	100984777	100984848	100984812	ENSG00000201899.1	+	snoRNA	KNOWN	SNORD114-24	1	1	-0.100653
chr14	100986057	100986128	100986092	ENSG00000200612.1	+	snoRNA	KNOWN	SNORD114-25	1	1	-0.100653
chr14	100987046	100987117	100987081	ENSG00000200413.1	+	snoRNA	KNOWN	SNORD114-26	1	1	-0.100653
chr14	100988161	100988230	100988195	ENSG00000200636.1	+	snoRNA	KNOWN	SNORD114-27	1	1	-0.100653
chr14	100989130	100989201	100989165	ENSG00000200480.1	+	snoRNA	KNOWN	SNORD114-28	1	1	-0.100653
chr14	100990091	100990160	100990125	ENSG00000201689.1	+	snoRNA	KNOWN	SNORD114-29	1	1	0.159555
chr14	100991919	100991990	100991954	ENSG00000201318.1	+	snoRNA	KNOWN	SNORD114-30	1	1	0.159555
chr14	100993236	100993310	100993273	ENSG00000200089.1	+	snoRNA	KNOWN	SNORD114-31	1	1	0.159555
chr14	100994257	100994330	100994293	ENSG00000222095.1	+	snoRNA	NOVEL	SNORD113	1	1	0.159555
chr14	100998467	100998541	100998504	ENSG00000222185.1	+	snoRNA	NOVEL	SNORD113	1	1	0.159555
chr14	101022051	101022159	101022105	ENSG00000199088.4	+	miRNA	KNOWN	MIR379	1	1	0.464651
chr14	101023319	101023429	101023374	ENSG00000199109.3	+	miRNA	KNOWN	MIR411	1	1	0.464651
chr14	101023780	101023890	101023835	ENSG00000207749.3	+	miRNA	KNOWN	MIR299	1	1	0.464651
chr14	101025000	101025110	101025055	ENSG00000198982.3	+	miRNA	NOVEL	AL132709.2	1	1	0.464651
chr14	101025550	101025659	101025604	ENSG00000221745.2	+	miRNA	KNOWN	MIR1197	1	1	0.464651
chr14	101025712	101025819	101025765	ENSG00000199069.2	+	miRNA	KNOWN	MIR323A	1	1	0.464651
chr14	101026020	101026107	101026063	ENSG00000211582.1	+	miRNA	KNOWN	MIR758	1	1	0.464651
chr14	101026753	101026895	101026824	ENSG00000207761.2	+	miRNA	KNOWN	MIR329-1	1	1	0.464651
chr14	101027100	101027183	101027141	ENSG00000207762.1	+	miRNA	KNOWN	MIR329-2	1	1	0.464651
chr14	101029611	101029719	101029665	ENSG00000194717.3	+	miRNA	KNOWN	MIR494	1	1	0.464651
chr14	101030041	101030153	101030097	ENSG00000221036.4	+	miRNA	KNOWN	MIR1193	1	1	0.859949
chr14	101031963	101032070	101032016	ENSG00000212040.2	+	miRNA	KNOWN	MIR543	1	1	0.859949
chr14	101033734	101033841	101033787	ENSG00000207743.2	+	miRNA	KNOWN	MIR495	1	1	0.859949
chr14	101039338	101039437	101039387	ENSG00000265032.2	+	miRNA	NOVEL	AL132709.3	1	1	0.859949
chr14	101039662	101039771	101039716	ENSG00000277933.1	+	miRNA	KNOWN	MIR376C	1	1	0.859949
chr14	101040052	101040162	101040107	ENSG00000281098.1	+	miRNA	NOVEL	AL132709.6	1	1	0.859949
chr14	101040219	101040299	101040259	ENSG00000207934.1	+	miRNA	KNOWN	MIR654	1	1	0.859949
chr14	101040427	101040536	101040481	ENSG00000277780.1	+	miRNA	KNOWN	MIR376B	1	1	0.859949
chr14	101040755	101040864	101040809	ENSG00000277815.1	+	miRNA	KNOWN	MIR376A1	1	1	0.859949
chr14	101041363	101041445	101041404	ENSG00000215957.1	+	miRNA	KNOWN	MIR300	1	1	0.859949
chr14	101042977	101043062	101043019	ENSG00000221525.1	+	miRNA	KNOWN	MIR1185-1	1	1	0.859949
chr14	101044198	101044283	101044240	ENSG00000221614.1	+	miRNA	KNOWN	MIR1185-2	1	1	0.859949
chr14	101045157	101051795	101048476	ENSG00000258861.1	+	lincRNA	KNOWN	MIR381HG	1	3	0.785720
chr14	101045898	101046005	101045951	ENSG00000199020.2	+	miRNA	KNOWN	MIR381	1	1	0.859949
chr14	101046435	101046544	101046489	ENSG00000207754.2	+	miRNA	KNOWN	MIR487B	1	1	0.859949
chr14	101047313	101047416	101047364	ENSG00000202560.3	+	miRNA	KNOWN	MIR539	1	1	0.859949
chr14	101047879	101047988	101047933	ENSG00000216099.2	+	miRNA	KNOWN	MIR889	1	1	0.859949
chr14	101048658	101048748	101048703	ENSG00000207587.1	+	miRNA	KNOWN	MIR544A	1	1	0.859949
chr14	101049550	101049646	101049598	ENSG00000207646.1	+	miRNA	KNOWN	MIR655	1	1	0.859949
chr14	101051993	101052104	101052048	ENSG00000265250.2	+	miRNA	NOVEL	AL132709.4	1	1	0.585598
chr14	101052424	101052533	101052478	ENSG00000207558.2	+	miRNA	KNOWN	MIR487A	1	1	0.585598
chr14	101054301	101054386	101054343	ENSG00000207742.2	-	miRNA	KNOWN	MIR382	1	1	0.585598
chr14	101054687	101054759	101054723	ENSG00000207993.3	+	miRNA	KNOWN	MIR134	1	1	0.585598
chr14	101055229	101055339	101055284	ENSG00000276352.1	+	miRNA	NOVEL	AL132709.5	1	1	0.585598
chr14	101055407	101055515	101055461	ENSG00000208027.3	+	miRNA	KNOWN	MIR485	1	1	0.585598
chr14	101056219	101056300	101056259	ENSG00000208004.2	+	miRNA	KNOWN	MIR323B	1	1	0.585598
chr14	101059755	101059838	101059796	ENSG00000207978.1	+	miRNA	KNOWN	MIR154	1	1	0.585598
chr14	101060558	101060667	101060612	ENSG00000207961.2	+	miRNA	KNOWN	MIR496	1	1	0.585598
chr14	101062024	101062132	101062078	ENSG00000199015.3	+	miRNA	KNOWN	MIR377	1	1	0.585598
chr14	101064495	101064578	101064536	ENSG00000216179.1	+	miRNA	KNOWN	MIR541	1	1	0.585598
chr14	101065294	101065405	101065349	ENSG00000199107.2	+	miRNA	KNOWN	MIR409	1	1	0.585598
chr14	101065447	101065537	101065492	ENSG00000199012.2	+	miRNA	KNOWN	MIR412	1	1	0.585598
chr14	101065598	101065667	101065632	ENSG00000199025.4	+	miRNA	KNOWN	MIR369	1	1	0.585598
chr14	101065891	101065998	101065944	ENSG00000199092.3	+	miRNA	KNOWN	MIR410	1	1	0.585598
chr14	101066724	101066801	101066762	ENSG00000207959.1	+	miRNA	KNOWN	MIR656	1	1	0.585598
chr14	101069911	101072937	101071424	ENSG00000223403.3	+	lincRNA	KNOWN	MEG9	3	2	0.923977
chr14	101073869	101077910	101075889	ENSG00000230805.6	-	lincRNA	KNOWN	AL132709.1	5	4	0.934112
chr14	101120856	101123542	101122199	ENSG00000259004.1	+	lincRNA	KNOWN	RP11-8L8.2	1	2	0.671936
chr14	101145480	101145695	101145587	ENSG00000277754.1	-	snoRNA	NOVEL	U3	1	1	0.445629
chr14	101217372	101218241	101217806	ENSG00000258681.1	-	processed_pseudogene	KNOWN	RP11-8L8.1	1	1	0.100029
chr14	101257332	101278318	101267825	ENSG00000258497.1	+	lincRNA	KNOWN	CTD-2561F5.1	1	2	0.410483
chr14	101332516	101334331	101333423	ENSG00000258460.1	-	lincRNA	KNOWN	RP11-168L7.1	1	2	0.314384
chr14	101405987	101407922	101406954	ENSG00000259023.2	-	lincRNA	KNOWN	LINC00524	1	2	0.187340
chr14	101442076	101444315	101443195	ENSG00000259082.1	+	lincRNA	KNOWN	RP11-168L7.3	1	2	-0.194126
chr14	101447642	101457117	101452379	ENSG00000259166.1	+	lincRNA	KNOWN	RP11-1029J19.2	1	3	-0.017993
chr14	101552221	101560431	101556326	ENSG00000258498.6	-	lincRNA	KNOWN	DIO3OS	13	6	0.755871
chr14	101560287	101560422	101560354	ENSG00000277601.1	-	miRNA	KNOWN	MIR1247	1	1	0.755871
chr14	101561351	101563452	101562401	ENSG00000197406.7	+	protein_coding	KNOWN	DIO3	1	1	0.755871
chr14	101628984	101632530	101630757	ENSG00000258919.1	-	lincRNA	KNOWN	RP11-1029J19.4	1	2	0.505266
chr14	101634454	101731108	101682781	ENSG00000258404.1	-	lincRNA	KNOWN	RP11-1029J19.5	1	3	0.253924
chr14	101677943	101678380	101678161	ENSG00000241494.1	+	processed_pseudogene	KNOWN	RP11-796G6.1	1	1	0.075690
chr14	101730437	101732522	101731479	ENSG00000258512.1	+	lincRNA	KNOWN	LINC00239	1	4	0.347937
chr14	101761798	101927989	101844893	ENSG00000078304.19	+	protein_coding	KNOWN	PPP2R5C	33	16	0.442482
chr14	101796555	101810321	101803438	ENSG00000259088.1	-	antisense	KNOWN	CTD-2017C7.2	1	2	0.368174
chr14	101803227	101803331	101803279	ENSG00000207208.1	+	snRNA	KNOWN	RNU6-790P	1	1	0.367626
chr14	101833435	101839531	101836483	ENSG00000256705.3	-	antisense	KNOWN	CTD-2017C7.1	1	2	0.358879
chr14	101843394	101844122	101843758	ENSG00000259161.2	-	processed_pseudogene	KNOWN	CTD-2017C7.3	1	1	0.358879
chr14	101948347	101949425	101948886	ENSG00000271780.1	+	lincRNA	KNOWN	RP11-1017G21.5	1	1	0.714429
chr14	101952416	101953063	101952739	ENSG00000272444.1	+	lincRNA	KNOWN	RP11-1017G21.6	1	1	0.873352
chr14	101964528	102050792	102007660	ENSG00000197102.10	+	protein_coding	KNOWN	DYNC1H1	11	78	0.779624
chr14	101969364	101969601	101969482	ENSG00000259013.2	-	processed_pseudogene	KNOWN	RP11-1017G21.3	1	1	0.873352
chr14	102036315	102066228	102051271	ENSG00000258959.1	-	antisense	KNOWN	RP11-1017G21.4	3	3	0.852960
chr14	102077180	102077472	102077326	ENSG00000240457.3	-	misc_RNA	KNOWN	RN7SL472P	1	1	0.801045
chr14	102080738	102139699	102110218	ENSG00000080824.18	-	protein_coding	KNOWN	HSP90AA1	10	12	0.693315
chr14	102139503	102224847	102182175	ENSG00000140153.17	+	protein_coding	KNOWN	WDR20	20	5	0.521194
chr14	102224500	102305200	102264850	ENSG00000080823.21	-	protein_coding	KNOWN	MOK	41	12	0.631448
chr14	102317377	102342702	102330039	ENSG00000022976.15	+	protein_coding	KNOWN	ZNF839	12	9	0.688108
chr14	102340969	102341069	102341019	ENSG00000280608.1	+	miRNA	NOVEL	AL137229.1	1	1	0.668493
chr14	102341102	102362916	102352009	ENSG00000100865.14	-	protein_coding	KNOWN	CINP	9	6	0.675075
chr14	102362963	102502481	102432722	ENSG00000196663.15	+	protein_coding	KNOWN	TECPR2	7	20	0.583691
chr14	102501676	102501779	102501727	ENSG00000212330.1	+	snRNA	KNOWN	RNU6-244P	1	1	0.719018
chr14	102501760	102509799	102505779	ENSG00000156381.8	-	protein_coding	KNOWN	ANKRD9	5	4	0.719018
chr14	102539644	102539726	102539685	ENSG00000266015.1	+	miRNA	KNOWN	MIR4309	1	1	1.312798
chr14	102545254	102555826	102550540	ENSG00000259230.1	+	lincRNA	KNOWN	CTD-2555C10.3	1	3	1.066556
chr14	102582888	102583177	102583032	ENSG00000239224.3	-	misc_RNA	KNOWN	RN7SL546P	1	1	0.903664
chr14	102592661	102730576	102661618	ENSG00000089902.9	+	protein_coding	KNOWN	RCOR1	4	12	0.484933
chr14	102662240	102662708	102662474	ENSG00000230988.3	-	processed_pseudogene	KNOWN	RPL23AP11	1	1	0.541795
chr14	102695388	102695495	102695441	ENSG00000202459.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.254097
chr14	102770040	102774791	102772415	ENSG00000259508.1	-	lincRNA	KNOWN	RP11-661D19.3	2	2	0.680136
chr14	102777476	102911500	102844488	ENSG00000131323.14	+	protein_coding	KNOWN	TRAF3	9	12	0.522229
chr14	102865856	102865963	102865909	ENSG00000206969.1	+	snRNA	KNOWN	RNU6-1316P	1	1	0.398831
chr14	102879621	102879738	102879679	ENSG00000211990.1	+	miRNA	NOVEL	AL117209.1	1	1	0.375552
chr14	102922656	102933596	102928126	ENSG00000166126.10	+	protein_coding	KNOWN	AMN	7	12	0.916807
chr14	102932379	103057462	102994920	ENSG00000198752.10	-	protein_coding	KNOWN	CDC42BPB	9	37	0.755359
chr14	102933574	102937177	102935375	ENSG00000259515.1	+	antisense	KNOWN	RP11-365N19.2	1	2	0.979965
chr14	103041469	103042094	103041781	ENSG00000213176.4	+	processed_pseudogene	KNOWN	RPL13P6	1	1	0.511706
chr14	103084210	103090027	103087118	ENSG00000283071.1	+	protein_coding	KNOWN	RP11-736N17.11	1	4	1.037092
chr14	103094723	103098885	103096804	ENSG00000259444.1	+	sense_overlapping	KNOWN	RP11-736N17.8	1	2	1.220725
chr14	103100144	103110559	103105351	ENSG00000205436.7	+	protein_coding	KNOWN	EXOC3L4	7	11	1.219355
chr14	103120847	103123007	103121927	ENSG00000259717.1	-	lincRNA	KNOWN	LINC00677	2	2	1.195246
chr14	103123442	103137439	103130440	ENSG00000185215.8	+	protein_coding	KNOWN	TNFAIP2	11	12	1.119541
chr14	103139675	103141959	103140817	ENSG00000259374.2	+	transcribed_processed_pseudogene	KNOWN	RP11-736N17.4	2	1	1.052821
chr14	103148597	103149408	103149002	ENSG00000259535.1	+	processed_pseudogene	KNOWN	RPL21P12	1	2	1.052821
chr14	103184204	103185039	103184621	ENSG00000259525.1	+	processed_pseudogene	KNOWN	GCSHP2	1	2	0.758484
chr14	103187221	103189028	103188124	ENSG00000251533.2	-	lincRNA	KNOWN	LINC00605	1	3	0.758484
chr14	103207748	103207789	103207768	ENSG00000270705.1	+	processed_pseudogene	KNOWN	RP11-736N17.9	1	1	0.615925
chr14	103208100	103208876	103208488	ENSG00000278071.1	+	lincRNA	KNOWN	RP11-736N17.10	1	1	0.615925
chr14	103241492	103241972	103241732	ENSG00000242837.1	+	processed_pseudogene	KNOWN	RPL21P13	1	1	0.732911
chr14	103279223	103279955	103279589	ENSG00000270938.1	+	transcribed_processed_pseudogene	KNOWN	RAP2CP1	2	1	0.409076
chr14	103282933	103283468	103283200	ENSG00000240624.1	+	processed_pseudogene	KNOWN	RP11-45P15.2	1	1	0.409076
chr14	103331674	103332367	103332020	ENSG00000259775.1	-	antisense	KNOWN	RP11-45P15.4	1	1	0.806083
chr14	103333544	103345025	103339284	ENSG00000100664.10	+	protein_coding	KNOWN	EIF5	21	12	0.806083
chr14	103337849	103337974	103337911	ENSG00000272533.1	+	snoRNA	KNOWN	SNORA28	1	1	0.806083
chr14	103364239	103364820	103364529	ENSG00000259428.1	-	processed_pseudogene	KNOWN	HMGB3P26	1	1	0.851858
chr14	103374033	103374916	103374474	ENSG00000243904.1	-	processed_pseudogene	KNOWN	RPSAP5	1	1	0.491348
chr14	103385392	103503831	103444611	ENSG00000075413.17	+	protein_coding	KNOWN	MARK3	26	19	0.520884
chr14	103412119	103412761	103412440	ENSG00000244691.1	-	processed_pseudogene	KNOWN	RPL10AP1	1	1	0.534836
chr14	103519659	103523111	103521385	ENSG00000166165.12	-	protein_coding	KNOWN	CKB	17	8	0.843555
chr14	103525010	103529072	103527041	ENSG00000260285.1	-	antisense	KNOWN	RP11-600F24.7	1	1	0.843555
chr14	103529184	103537073	103533128	ENSG00000166166.12	+	protein_coding	KNOWN	TRMT61A	2	4	1.012255
chr14	103550345	103550406	103550375	ENSG00000252469.1	+	snRNA	KNOWN	RNU7-160P	1	1	1.029835
chr14	103553421	103561877	103557649	ENSG00000258851.1	+	antisense	KNOWN	RP11-894P9.2	1	2	1.029835
chr14	103556544	103562831	103559687	ENSG00000166170.9	-	protein_coding	KNOWN	BAG5	4	2	1.029835
chr14	103561896	103714249	103638072	ENSG00000126214.21	+	protein_coding	KNOWN	KLC1	27	17	0.784599
chr14	103562962	103685924	103624443	ENSG00000256500.5	+	protein_coding	KNOWN	RP11-73M18.2	1	18	0.761577
chr14	103562962	103607523	103585242	ENSG00000256053.7	+	protein_coding	KNOWN	APOPT1	16	6	0.765688
chr14	103567405	103567545	103567475	ENSG00000201184.1	+	snRNA	KNOWN	RNU4-68P	1	1	1.029835
chr14	103682362	103684015	103683188	ENSG00000246451.2	-	antisense	KNOWN	RP11-894P9.1	1	2	0.905060
chr14	103687576	103688127	103687851	ENSG00000270108.1	+	sense_intronic	KNOWN	RP11-73M18.6	1	1	0.905060
chr14	103694516	103695050	103694783	ENSG00000269910.1	-	antisense	KNOWN	RP11-73M18.10	1	1	0.817436
chr14	103694560	103695170	103694865	ENSG00000269940.1	+	sense_intronic	KNOWN	RP11-73M18.7	1	1	0.817436
chr14	103696353	103697163	103696758	ENSG00000269958.1	+	sense_intronic	KNOWN	RP11-73M18.8	1	1	0.817436
chr14	103697609	103715504	103706556	ENSG00000126215.13	-	protein_coding	KNOWN	XRCC3	18	10	0.910245
chr14	103715730	103733668	103724699	ENSG00000100711.13	+	protein_coding	KNOWN	ZFYVE21	12	8	1.082691
chr14	103725728	103725825	103725776	ENSG00000253096.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.119128
chr14	103733752	103847590	103790671	ENSG00000088808.16	-	protein_coding	KNOWN	PPP1R13B	17	18	0.541246
chr14	103762803	103763277	103763040	ENSG00000270591.1	+	transcribed_processed_pseudogene	KNOWN	RP11-73M18.11	2	1	0.643402
chr14	103797272	103797348	103797310	ENSG00000202275.1	-	snoRNA	NOVEL	SNORD51	1	1	0.321726
chr14	103847721	103858049	103852885	ENSG00000258735.1	+	lincRNA	KNOWN	LINC00637	1	3	0.568394
chr14	103854366	103880111	103867238	ENSG00000258534.1	-	lincRNA	KNOWN	CTD-2134A5.4	1	4	0.632425
chr14	103875055	103877478	103876266	ENSG00000258914.1	+	lincRNA	KNOWN	CTD-2134A5.3	1	2	0.725864
chr14	103912288	103928269	103920278	ENSG00000156411.9	-	protein_coding	KNOWN	C14orf2	12	5	0.704176
chr14	103928462	104052667	103990564	ENSG00000156414.18	+	protein_coding	KNOWN	TDRD9	8	36	0.099418
chr14	103940426	103942308	103941367	ENSG00000227729.3	-	protein_coding	KNOWN	RD3L	1	3	0.251568
chr14	103980798	103980883	103980840	ENSG00000264439.1	-	miRNA	NOVEL	AL136001.1	1	1	0.117377
chr14	104013642	104013933	104013787	ENSG00000242894.3	+	misc_RNA	KNOWN	RN7SL634P	1	1	-0.034272
chr14	104085679	104115581	104100630	ENSG00000166183.15	+	protein_coding	KNOWN	ASPG	9	16	0.717457
chr14	104117405	104117514	104117459	ENSG00000207568.1	+	miRNA	KNOWN	MIR203A	1	1	0.918189
chr14	104137150	104137898	104137524	ENSG00000258748.1	-	antisense	KNOWN	CTD-2223O18.1	1	2	0.498901
chr14	104138723	104180894	104159808	ENSG00000066735.14	+	protein_coding	KNOWN	KIF26A	2	15	0.603842
chr14	104223584	104288069	104255826	ENSG00000258913.1	+	lincRNA	KNOWN	RP11-260M19.2	3	3	0.490084
chr14	104376530	104378951	104377740	ENSG00000258598.1	-	lincRNA	KNOWN	RP11-260M19.1	1	3	0.514683
chr14	104400943	104401048	104400995	ENSG00000222761.1	-	snRNA	KNOWN	RNU6-684P	1	1	0.541928
chr14	104450979	104451433	104451206	ENSG00000213159.4	+	processed_pseudogene	KNOWN	CEND1P1	1	1	0.100029
chr14	104474678	104605647	104540162	ENSG00000258986.6	-	protein_coding	KNOWN	TMEM179	6	4	0.469238
chr14	104579684	104590515	104585099	ENSG00000184601.10	+	protein_coding	KNOWN	C14orf180	3	5	0.844839
chr14	104589021	104589847	104589434	ENSG00000259037.1	-	antisense	KNOWN	RP11-614O9.1	1	2	0.846516
chr14	104653548	104655787	104654667	ENSG00000258736.1	-	lincRNA	KNOWN	RP11-982M15.7	2	2	0.920332
chr14	104661120	104665558	104663339	ENSG00000260792.1	-	lincRNA	KNOWN	RP11-982M15.8	1	2	0.920332
chr14	104677694	104677749	104677721	ENSG00000265291.1	-	miRNA	KNOWN	MIR4710	1	1	1.024034
chr14	104681146	104684932	104683039	ENSG00000256050.2	+	lincRNA	KNOWN	RP11-982M15.6	1	2	1.024034
chr14	104689606	104722535	104706070	ENSG00000203485.12	+	protein_coding	KNOWN	INF2	9	23	1.168795
chr14	104690091	104691284	104690687	ENSG00000258858.1	-	antisense	KNOWN	RP11-982M15.5	1	2	1.091992
chr14	104724186	104747325	104735755	ENSG00000185100.10	+	protein_coding	KNOWN	ADSSL1	12	13	1.241482
chr14	104753100	104768494	104760797	ENSG00000184990.12	+	protein_coding	KNOWN	SIVA1	8	6	1.016441
chr14	104769349	104795751	104782550	ENSG00000142208.15	-	protein_coding	KNOWN	AKT1	19	15	1.205859
chr14	104769349	104770271	104769810	ENSG00000258430.1	+	antisense	KNOWN	RP11-982M15.2	1	2	1.069381
chr14	104800596	104804712	104802654	ENSG00000179627.9	+	protein_coding	KNOWN	ZBTB42	2	2	1.261917
chr14	104815449	104815753	104815601	ENSG00000279140.1	-	TEC	KNOWN	RP11-477I4.4	1	1	1.109479
chr14	104821201	104823718	104822459	ENSG00000258701.1	+	lincRNA	KNOWN	LINC00638	1	1	1.109479
chr14	104830838	104831171	104831004	ENSG00000239365.2	-	processed_pseudogene	KNOWN	RPS26P49	1	1	0.640781
chr14	104835997	104836852	104836424	ENSG00000196183.5	-	processed_pseudogene	KNOWN	RPS2P4	1	1	0.640781
chr14	104842663	104845916	104844289	ENSG00000258811.1	+	lincRNA	KNOWN	CTD-3051D23.1	1	1	0.640781
chr14	104857792	104858836	104858314	ENSG00000258593.2	-	lincRNA	KNOWN	CTD-3051D23.4	1	1	0.684567
chr14	104865280	104896770	104881025	ENSG00000099814.15	+	protein_coding	KNOWN	CEP170B	4	19	1.100800
chr14	104904342	104905204	104904773	ENSG00000259067.1	+	lincRNA	KNOWN	CTD-3051D23.3	1	3	1.258642
chr14	104924816	104937790	104931303	ENSG00000166428.12	+	protein_coding	KNOWN	PLD4	6	11	0.748395
chr14	104937244	104978357	104957800	ENSG00000185567.6	-	protein_coding	KNOWN	AHNAK2	4	7	1.063530
chr14	104985775	105010482	104998128	ENSG00000140104.13	+	protein_coding	KNOWN	C14orf79	9	6	0.960447
chr14	105009573	105021148	105015360	ENSG00000170779.10	-	protein_coding	KNOWN	CDCA4	2	3	1.046836
chr14	105049389	105065445	105057417	ENSG00000183484.11	-	protein_coding	KNOWN	GPR132	6	5	1.056507
chr14	105093609	105099004	105096306	ENSG00000257556.1	+	lincRNA	KNOWN	RP11-44N21.1	3	3	1.026104
chr14	105110347	105110807	105110577	ENSG00000280244.1	-	TEC	KNOWN	RP11-44N21.3	1	1	0.548506
chr14	105112690	105112863	105112776	ENSG00000258154.2	-	unprocessed_pseudogene	KNOWN	RP11-44N21.2	1	1	0.548506
chr14	105140981	105168824	105154902	ENSG00000184916.8	-	protein_coding	KNOWN	JAG2	5	26	0.941013
chr14	105150778	105150864	105150821	ENSG00000273778.1	-	miRNA	KNOWN	MIR6765	1	1	1.147976
chr14	105152194	105181194	105166694	ENSG00000257622.1	-	processed_transcript	KNOWN	RP11-44N21.4	1	5	1.156306
chr14	105172938	105181323	105177130	ENSG00000183828.14	-	protein_coding	KNOWN	NUDT14	6	5	1.169553
chr14	105209286	105315589	105262437	ENSG00000185024.16	-	protein_coding	KNOWN	BRF1	22	18	0.948834
chr14	105248490	105251093	105249791	ENSG00000184887.13	+	protein_coding	KNOWN	BTBD6	6	5	1.072424
chr14	105300563	105398147	105349355	ENSG00000179364.13	+	protein_coding	KNOWN	PACS2	14	25	1.035895
chr14	105370418	105372918	105371668	ENSG00000279495.1	+	TEC	KNOWN	RP11-521B24.4	1	1	1.028940
chr14	105374618	105374971	105374794	ENSG00000242085.1	+	processed_pseudogene	KNOWN	RPS20P33	1	1	1.028940
chr14	105384360	105384461	105384410	ENSG00000281275.1	-	miRNA	NOVEL	AL928654.1	1	1	1.028940
chr14	105398579	105450106	105424342	ENSG00000226174.6	+	protein_coding	KNOWN	TEX22	2	6	0.778484
chr14	105416884	105419739	105418311	ENSG00000251602.6	-	antisense	KNOWN	RP11-521B24.3	2	3	0.615554
chr14	105419820	105470729	105445274	ENSG00000182979.17	+	protein_coding	KNOWN	MTA1	20	22	0.979729
chr14	105467793	105470617	105469205	ENSG00000257270.1	-	antisense	KNOWN	RP11-521B24.5	1	2	1.292289
chr14	105472962	105480170	105476566	ENSG00000182809.10	+	protein_coding	KNOWN	CRIP2	11	8	0.875313
chr14	105486317	105488947	105487632	ENSG00000213145.9	+	protein_coding	KNOWN	CRIP1	6	6	0.875313
chr14	105487199	105492267	105489733	ENSG00000257341.5	+	protein_coding	KNOWN	AL928654.7	6	7	0.938950
chr14	105489855	105499575	105494715	ENSG00000185347.17	+	protein_coding	KNOWN	C14orf80	20	9	1.015407
chr14	105526603	105530202	105528402	ENSG00000184986.10	+	protein_coding	KNOWN	TMEM121	3	2	0.569489
chr14	105536861	105537239	105537050	ENSG00000230157.1	-	processed_pseudogene	KNOWN	ATP5G1P1	1	1	0.687371
chr14	105546610	105549694	105548152	ENSG00000234402.1	-	unprocessed_pseudogene	KNOWN	ELK2BP	1	2	0.687371
chr14	105586889	105588395	105587642	ENSG00000211890.3	-	IG_C_gene	KNOWN	IGHA2	1	3	0.552148
chr14	105591070	105591129	105591099	ENSG00000266597.1	-	miRNA	NOVEL	AL928742.1	1	1	0.692384
chr14	105597691	105600209	105598950	ENSG00000227468.4	-	lincRNA	KNOWN	AL928742.12	4	3	0.692384
chr14	105599941	105601728	105600834	ENSG00000211891.5	-	IG_C_gene	KNOWN	IGHE	1	4	0.692384
chr14	105601472	105605357	105603414	ENSG00000254140.1	-	lincRNA	KNOWN	RP11-731F5.1	2	2	0.692384
chr14	105621116	105621180	105621148	ENSG00000274172.1	+	miRNA	KNOWN	MIR8071-1	1	1	0.656655
chr14	105624341	105626066	105625203	ENSG00000211892.3	-	IG_C_gene	KNOWN	IGHG4	1	4	0.656655
chr14	105640168	105640232	105640200	ENSG00000277030.1	+	miRNA	KNOWN	MIR8071-2	1	1	0.585238
chr14	105643052	105644790	105643921	ENSG00000211893.3	-	IG_C_gene	KNOWN	IGHG2	1	4	0.585238
chr14	105644496	105649057	105646776	ENSG00000253364.1	-	lincRNA	KNOWN	RP11-731F5.2	2	3	0.585238
chr14	105663828	105663892	105663860	ENSG00000275301.1	+	miRNA	NOVEL	AL928761.1	1	1	0.485423
chr14	105664633	105669843	105667238	ENSG00000253755.1	-	IG_C_pseudogene	KNOWN	IGHGP	1	6	0.485423
chr14	105672308	105673314	105672811	ENSG00000213140.3	-	processed_pseudogene	KNOWN	ELK2AP	1	1	0.301255
chr14	105703961	105704602	105704281	ENSG00000253701.2	-	lincRNA	KNOWN	AL928768.3	1	2	0.711306
chr14	105707118	105708665	105707891	ENSG00000211895.4	-	IG_C_gene	KNOWN	IGHA1	1	3	0.711306
chr14	105711923	105711992	105711957	ENSG00000264024.1	-	miRNA	NOVEL	AL901608.1	1	1	0.676954
chr14	105721794	105722527	105722160	ENSG00000253692.3	-	IG_C_pseudogene	KNOWN	IGHEP1	1	2	0.676954
chr14	105736343	105743071	105739707	ENSG00000211896.7	-	IG_C_gene	KNOWN	IGHG1	3	6	0.305587
chr14	105736956	105737020	105736988	ENSG00000278556.1	+	miRNA	NOVEL	AL122127.3	1	1	0.305587
chr14	105765117	105765180	105765148	ENSG00000277054.1	+	miRNA	NOVEL	AL122127.2	1	1	0.557902
chr14	105769102	105771405	105770253	ENSG00000211897.8	-	IG_C_gene	KNOWN	IGHG3	1	7	0.467669
chr14	105785505	105785831	105785668	ENSG00000270371.1	-	processed_pseudogene	KNOWN	RP11-417P24.1	1	1	0.410102
chr14	105836765	105845678	105841221	ENSG00000211898.7	-	IG_C_gene	KNOWN	IGHD	2	7	-0.425692
chr14	105854220	105856218	105855219	ENSG00000211899.8	-	IG_C_gene	KNOWN	IGHM	1	4	0.625569
chr14	105857513	105857572	105857542	ENSG00000265612.1	-	miRNA	KNOWN	MIR4539	1	1	0.625569
chr14	105857573	105857632	105857602	ENSG00000266706.1	-	miRNA	NOVEL	AC246787.5	1	1	0.625569
chr14	105857743	105857802	105857772	ENSG00000265517.1	-	miRNA	NOVEL	AC246787.3	1	1	0.625569
chr14	105858165	105858242	105858203	ENSG00000263413.2	-	miRNA	KNOWN	MIR4538	1	1	0.625569
chr14	105858335	105858412	105858373	ENSG00000263751.1	-	miRNA	NOVEL	AC246787.1	1	1	0.625569
chr14	105859484	105859553	105859518	ENSG00000264781.1	-	miRNA	KNOWN	MIR4537	1	1	0.625569
chr14	105859738	105859804	105859771	ENSG00000265714.1	-	miRNA	NOVEL	AC246787.4	1	1	0.625569
chr14	105863198	105863258	105863228	ENSG00000211900.2	-	IG_J_gene	KNOWN	IGHJ6	1	1	0.625569
chr14	105863416	105863465	105863440	ENSG00000237111.1	-	IG_J_pseudogene	KNOWN	IGHJ3P	1	1	0.625569
chr14	105863814	105863862	105863838	ENSG00000242472.1	-	IG_J_gene	KNOWN	IGHJ5	1	1	0.625569
chr14	105864215	105864260	105864237	ENSG00000240041.1	-	IG_J_gene	KNOWN	IGHJ4	1	1	0.625569
chr14	105864587	105864635	105864611	ENSG00000242887.1	-	IG_J_gene	KNOWN	IGHJ3	1	1	0.625569
chr14	105864793	105864852	105864822	ENSG00000237547.1	-	IG_J_pseudogene	KNOWN	IGHJ2P	1	1	0.625569
chr14	105865199	105865250	105865224	ENSG00000211904.2	-	IG_J_gene	KNOWN	IGHJ2	1	1	0.625569
chr14	105865407	105865458	105865432	ENSG00000211905.1	-	IG_J_gene	KNOWN	IGHJ1	1	1	0.625569
chr14	105865551	105865561	105865556	ENSG00000236597.1	-	IG_D_gene	KNOWN	IGHD7-27	1	1	0.625569
chr14	105865624	105865678	105865651	ENSG00000227335.1	-	IG_J_pseudogene	KNOWN	IGHJ1P	1	1	0.625569
chr14	105881034	105881053	105881043	ENSG00000211907.1	-	IG_D_gene	KNOWN	IGHD1-26	1	1	0.263847
chr14	105881539	105881556	105881547	ENSG00000225825.1	-	IG_D_gene	KNOWN	IGHD6-25	1	1	0.263847
chr14	105883903	105883922	105883912	ENSG00000211909.1	-	IG_D_gene	KNOWN	IGHD5-24	1	1	0.263847
chr14	105884870	105884888	105884879	ENSG00000227196.1	-	IG_D_gene	KNOWN	IGHD4-23	1	1	0.263847
chr14	105886031	105886061	105886046	ENSG00000211911.1	-	IG_D_gene	KNOWN	IGHD3-22	1	1	0.263847
chr14	105888551	105888578	105888564	ENSG00000211912.1	-	IG_D_gene	KNOWN	IGHD2-21	1	1	0.263847
chr14	105890084	105896577	105893330	ENSG00000244620.1	+	lincRNA	KNOWN	AL122127.25	2	4	0.684488
chr14	105891191	105891207	105891199	ENSG00000237020.1	-	IG_D_gene	KNOWN	IGHD1-20	1	1	0.684488
chr14	105891699	105891719	105891709	ENSG00000211914.1	-	IG_D_gene	KNOWN	IGHD6-19	1	1	0.684488
chr14	105893542	105893561	105893551	ENSG00000211915.1	-	IG_D_gene	KNOWN	IGHD5-18	1	1	0.684488
chr14	105894508	105894523	105894515	ENSG00000227800.1	-	IG_D_gene	KNOWN	IGHD4-17	1	1	0.684488
chr14	105895634	105895670	105895652	ENSG00000211917.1	-	IG_D_gene	KNOWN	IGHD3-16	1	1	0.684488
chr14	105897957	105897987	105897972	ENSG00000211918.1	-	IG_D_gene	KNOWN	IGHD2-15	1	1	0.684488
chr14	105900638	105900654	105900646	ENSG00000227108.1	-	IG_D_gene	KNOWN	IGHD1-14	1	1	0.684488
chr14	105901142	105901162	105901152	ENSG00000211920.1	-	IG_D_gene	KNOWN	IGHD6-13	1	1	0.684488
chr14	105902649	105902671	105902660	ENSG00000211921.1	-	IG_D_gene	KNOWN	IGHD5-12	1	1	0.684488
chr14	105903616	105903631	105903623	ENSG00000232543.2	-	IG_D_gene	KNOWN	IGHD4-11	1	1	0.684488
chr14	105904497	105904527	105904512	ENSG00000211923.1	-	IG_D_gene	KNOWN	IGHD3-10	1	1	0.684488
chr14	105904681	105904711	105904696	ENSG00000211924.1	-	IG_D_gene	KNOWN	IGHD3-9	1	1	0.684488
chr14	105907211	105907241	105907226	ENSG00000211925.1	-	IG_D_gene	KNOWN	IGHD2-8	1	1	0.684488
chr14	105909907	105909923	105909915	ENSG00000237197.1	-	IG_D_gene	KNOWN	IGHD1-7	1	1	0.684488
chr14	105910410	105910427	105910418	ENSG00000228131.1	-	IG_D_gene	KNOWN	IGHD6-6	1	1	0.423701
chr14	105912257	105912276	105912266	ENSG00000211928.1	-	IG_D_gene	KNOWN	IGHD5-5	1	1	0.423701
chr14	105913222	105913237	105913229	ENSG00000233655.1	-	IG_D_gene	KNOWN	IGHD4-4	1	1	0.423701
chr14	105914359	105914389	105914374	ENSG00000211930.1	-	IG_D_gene	KNOWN	IGHD3-3	1	1	0.423701
chr14	105916826	105916856	105916841	ENSG00000211931.1	-	IG_D_gene	KNOWN	IGHD2-2	1	1	0.423701
chr14	105917979	105932642	105925310	ENSG00000226777.7	+	lincRNA	KNOWN	KIAA0125	6	6	0.388572
chr14	105919502	105919518	105919510	ENSG00000236170.1	-	IG_D_gene	KNOWN	IGHD1-1	1	1	0.423701
chr14	105939756	105940253	105940004	ENSG00000211933.2	-	IG_V_gene	KNOWN	IGHV6-1	1	2	0.228808
chr14	105945210	105945389	105945299	ENSG00000254279.1	-	IG_V_pseudogene	KNOWN	IGHVII-1-1	1	1	0.228808
chr14	105969729	105972269	105970999	ENSG00000271968.2	-	transcribed_unprocessed_pseudogene	KNOWN	ADAM6	2	2	-0.038406
chr14	105978520	105979146	105978833	ENSG00000225200.2	-	processed_pseudogene	KNOWN	AB019441.29	1	1	-0.042145
chr14	105986582	105987083	105986832	ENSG00000211934.3	-	IG_V_gene	KNOWN	IGHV1-2	1	2	-0.042145
chr14	106001534	106001824	106001679	ENSG00000253780.1	-	IG_V_pseudogene	KNOWN	IGHVIII-2-1	1	1	-0.022179
chr14	106005095	106005574	106005334	ENSG00000211935.3	-	IG_V_gene	KNOWN	IGHV1-3	1	2	-0.022179
chr14	106011922	106012420	106012171	ENSG00000276775.1	-	IG_V_gene	KNOWN	IGHV4-4	1	2	0.138385
chr14	106025145	106025630	106025387	ENSG00000282122.1	-	IG_V_gene	KNOWN	CH17-262H11.1	1	2	0.138385
chr14	106037902	106038365	106038133	ENSG00000211937.3	-	IG_V_gene	KNOWN	IGHV2-5	1	2	-0.062983
chr14	106039666	106039764	106039715	ENSG00000253387.1	-	IG_V_pseudogene	KNOWN	IGHVIII-5-1	1	1	-0.062983
chr14	106045600	106045860	106045730	ENSG00000254053.1	-	IG_V_pseudogene	KNOWN	IGHVIII-5-2	1	1	-0.062983
chr14	106055549	106055998	106055773	ENSG00000253763.1	-	IG_V_pseudogene	KNOWN	IGHV3-6	1	2	-0.203833
chr14	106062151	106062683	106062417	ENSG00000211938.2	-	IG_V_gene	KNOWN	IGHV3-7	1	2	-0.203833
chr14	106088122	106088573	106088347	ENSG00000282639.1	-	IG_V_gene	KNOWN	CH17-224D4.1	1	2	-0.391525
chr14	106107972	106108407	106108189	ENSG00000282651.1	-	IG_V_gene	KNOWN	CH17-224D4.2	1	2	-0.130401
chr14	106116635	106117204	106116919	ENSG00000211941.3	-	IG_V_gene	KNOWN	IGHV3-11	1	2	-0.019901
chr14	106120207	106120473	106120340	ENSG00000254215.1	-	IG_V_pseudogene	KNOWN	IGHVIII-11-1	1	1	-0.019901
chr14	106122420	106122709	106122564	ENSG00000254174.1	-	IG_V_pseudogene	KNOWN	IGHV1-12	1	2	-0.019901
chr14	106129540	106130072	106129806	ENSG00000211942.3	-	IG_V_gene	KNOWN	IGHV3-13	1	2	-0.063468
chr14	106142287	106142577	106142432	ENSG00000253412.1	-	IG_V_pseudogene	KNOWN	IGHVIII-13-1	1	1	-0.337401
chr14	106145891	106146131	106146011	ENSG00000253709.1	-	IG_V_pseudogene	KNOWN	IGHV1-14	1	1	-0.337401
chr14	106153624	106154163	106153893	ENSG00000211943.2	-	IG_V_gene	KNOWN	IGHV3-15	1	2	0.010050
chr14	106163583	106163802	106163692	ENSG00000253458.1	-	IG_V_pseudogene	KNOWN	IGHVII-15-1	1	1	0.010050
chr14	106165205	106165730	106165467	ENSG00000211944.2	-	IG_V_gene	KNOWN	IGHV3-16	1	2	0.010050
chr14	106174342	106174760	106174551	ENSG00000254046.1	-	IG_V_pseudogene	KNOWN	IGHV1-17	1	2	0.208805
chr14	106179554	106180519	106180036	ENSG00000273894.1	-	processed_pseudogene	KNOWN	SLC20A1P2	1	1	0.208805
chr14	106184901	106185394	106185147	ENSG00000211945.2	-	IG_V_gene	KNOWN	IGHV1-18	1	2	0.208805
chr14	106196700	106196990	106196845	ENSG00000253883.1	-	IG_V_pseudogene	KNOWN	IGHV3-19	1	1	0.011373
chr14	106206603	106208571	106207587	ENSG00000271201.1	+	lincRNA	KNOWN	AB019440.50	1	2	0.011373
chr14	106210936	106211453	106211194	ENSG00000211946.3	-	IG_V_gene	KNOWN	IGHV3-20	1	2	0.078876
chr14	106235064	106235594	106235329	ENSG00000211947.2	-	IG_V_gene	KNOWN	IGHV3-21	1	2	-0.143386
chr14	106257762	106258223	106257992	ENSG00000253957.1	-	IG_V_pseudogene	KNOWN	IGHV3-22	1	2	-0.258915
chr14	106263362	106263626	106263494	ENSG00000253345.1	-	IG_V_pseudogene	KNOWN	IGHVII-22-1	1	1	-0.258915
chr14	106264688	106264715	106264701	ENSG00000254045.1	-	IG_V_pseudogene	KNOWN	IGHVIII-22-2	1	1	-0.258915
chr14	106268606	106269140	106268873	ENSG00000211949.3	-	IG_V_gene	KNOWN	IGHV3-23	1	2	-0.258915
chr14	106276548	106277043	106276795	ENSG00000211950.2	-	IG_V_gene	KNOWN	IGHV1-24	1	2	-0.263667
chr14	106286811	106287657	106287234	ENSG00000238275.2	-	processed_pseudogene	KNOWN	HOMER2P2	1	1	-0.263667
chr14	106287674	106288828	106288251	ENSG00000276210.2	+	lincRNA	KNOWN	LINC00226	2	2	-0.263667
chr14	106289029	106289479	106289254	ENSG00000253441.1	-	IG_V_pseudogene	KNOWN	IGHV3-25	1	2	-0.263667
chr14	106293568	106293808	106293688	ENSG00000253367.1	-	IG_V_pseudogene	KNOWN	IGHVIII-25-1	1	1	-0.012978
chr14	106301396	106301862	106301629	ENSG00000211951.2	-	IG_V_gene	KNOWN	IGHV2-26	1	2	-0.012978
chr14	106309417	106309666	106309541	ENSG00000253462.1	-	IG_V_pseudogene	KNOWN	IGHVIII-26-1	1	1	-0.012978
chr14	106314651	106314975	106314813	ENSG00000253482.1	-	IG_V_pseudogene	KNOWN	IGHVII-26-2	1	1	-0.486276
chr14	106317823	106318236	106318029	ENSG00000254326.1	-	IG_V_pseudogene	KNOWN	IGHV7-27	1	2	-0.486276
chr14	106324254	106324760	106324507	ENSG00000211952.3	-	IG_V_gene	KNOWN	IGHV4-28	1	2	-0.486276
chr14	106331116	106331552	106331334	ENSG00000270474.1	-	IG_V_pseudogene	KNOWN	IGHV3-29	1	2	0.176261
chr14	106335082	106335613	106335347	ENSG00000270550.1	-	IG_V_gene	KNOWN	IGHV3-30	1	2	0.176261
chr14	106342724	106342955	106342839	ENSG00000253491.1	-	IG_V_pseudogene	KNOWN	IGHVII-30-1	1	1	0.176261
chr14	106344395	106344833	106344614	ENSG00000253587.1	-	IG_V_pseudogene	KNOWN	IGHV3-30-2	1	2	0.176261
chr14	106349283	106349792	106349537	ENSG00000231475.3	-	IG_V_gene	KNOWN	IGHV4-31	1	2	0.176261
chr14	106354672	106354708	106354690	ENSG00000253149.1	-	IG_V_pseudogene	KNOWN	IGHVII-31-1	1	1	0.078816
chr14	106356165	106356591	106356378	ENSG00000254289.1	-	IG_V_pseudogene	KNOWN	IGHV3-32	1	2	0.078816
chr14	106359793	106360324	106360058	ENSG00000211955.2	-	IG_V_gene	KNOWN	IGHV3-33	1	2	0.078816
chr14	106367385	106367664	106367524	ENSG00000254203.1	-	IG_V_pseudogene	KNOWN	IGHVII-33-1	1	1	0.078816
chr14	106369107	106369546	106369326	ENSG00000253440.1	-	IG_V_pseudogene	KNOWN	IGHV3-33-2	1	2	0.078816
chr14	106373663	106374145	106373904	ENSG00000211956.2	-	IG_V_gene	KNOWN	IGHV4-34	1	2	0.043629
chr14	106377300	106377733	106377516	ENSG00000253325.1	-	IG_V_pseudogene	KNOWN	IGHV7-34-1	1	2	0.043629
chr14	106389392	106389858	106389625	ENSG00000211957.2	-	IG_V_gene	KNOWN	IGHV3-35	1	2	0.043629
chr14	106392774	106393231	106393002	ENSG00000253240.1	-	IG_V_pseudogene	KNOWN	IGHV3-36	1	2	-0.126648
chr14	106396676	106397114	106396895	ENSG00000253359.1	-	IG_V_pseudogene	KNOWN	IGHV3-37	1	2	-0.126648
chr14	106410493	106411021	106410757	ENSG00000211958.2	-	IG_V_gene	KNOWN	IGHV3-38	1	2	-0.102181
chr14	106418025	106418078	106418051	ENSG00000253989.1	-	IG_V_pseudogene	KNOWN	IGHVIII-38-1	1	1	-0.102181
chr14	106421711	106422218	106421964	ENSG00000211959.2	-	IG_V_gene	KNOWN	IGHV4-39	1	2	-0.102181
chr14	106425365	106425563	106425464	ENSG00000253467.1	-	IG_V_pseudogene	KNOWN	IGHV7-40	1	1	-0.102181
chr14	106436415	106436555	106436485	ENSG00000228757.1	-	unprocessed_pseudogene	KNOWN	AB019438.66	1	1	-0.454201
chr14	106440950	106441007	106440978	ENSG00000253294.1	-	IG_V_pseudogene	KNOWN	IGHVII-40-1	1	1	-0.454201
chr14	106443133	106443583	106443358	ENSG00000278473.1	-	IG_V_pseudogene	KNOWN	IGHV3-41	1	2	-0.454201
chr14	106460092	106461055	106460573	ENSG00000228966.2	-	processed_pseudogene	KNOWN	HOMER2P1	1	1	-0.400289
chr14	106463258	106463558	106463408	ENSG00000254228.1	-	IG_V_pseudogene	KNOWN	IGHV3-42	1	1	-0.400289
chr14	106470264	106470800	106470532	ENSG00000232216.1	-	IG_V_gene	KNOWN	IGHV3-43	1	2	-0.258026
chr14	106478220	106478393	106478306	ENSG00000253588.1	-	IG_V_pseudogene	KNOWN	IGHVIII-44	1	2	-0.258026
chr14	106482439	106521073	106501756	ENSG00000270816.5	+	lincRNA	KNOWN	LINC00221	3	4	-0.143881
chr14	106489345	106489756	106489550	ENSG00000253465.1	-	IG_V_pseudogene	KNOWN	IGHVIV-44-1	1	2	-0.258026
chr14	106494134	106494383	106494258	ENSG00000253895.1	-	IG_V_pseudogene	KNOWN	IGHVII-44-2	1	1	-0.085694
chr14	106506996	106507491	106507243	ENSG00000211961.3	-	IG_V_gene	KNOWN	IGHV1-45	1	2	-0.085694
chr14	106511117	106511856	106511486	ENSG00000211962.2	-	IG_V_gene	KNOWN	IGHV1-46	1	2	-0.171043
chr14	106515818	106515854	106515836	ENSG00000253808.1	-	IG_V_pseudogene	KNOWN	IGHVII-46-1	1	1	-0.171043
chr14	106518582	106519027	106518804	ENSG00000229092.2	-	IG_V_pseudogene	KNOWN	IGHV3-47	1	2	-0.171043
chr14	106531141	106531471	106531306	ENSG00000253862.1	-	IG_V_pseudogene	KNOWN	IGHVIII-47-1	1	1	-0.334939
chr14	106537810	106538344	106538077	ENSG00000211964.3	-	IG_V_gene	KNOWN	IGHV3-48	1	2	-0.334939
chr14	106556920	106675432	106616176	ENSG00000211965.3	-	IG_V_gene	KNOWN	IGHV3-49	2	2	-0.212572
chr14	106564375	106564598	106564486	ENSG00000253386.1	-	IG_V_pseudogene	KNOWN	IGHVII-49-1	1	1	-0.500465
chr14	106566117	106566555	106566336	ENSG00000253241.1	-	IG_V_pseudogene	KNOWN	IGHV3-50	1	2	-0.500465
chr14	106578744	106579236	106578990	ENSG00000211966.2	-	IG_V_gene	KNOWN	IGHV5-51	1	2	-0.136540
chr14	106583506	106583807	106583656	ENSG00000254167.1	-	IG_V_pseudogene	KNOWN	IGHVIII-51-1	1	1	-0.136540
chr14	106584718	106584976	106584847	ENSG00000253941.1	-	IG_V_pseudogene	KNOWN	IGHVII-51-2	1	1	-0.136540
chr14	106586376	106586826	106586601	ENSG00000253545.1	-	IG_V_pseudogene	KNOWN	IGHV3-52	1	2	-0.136540
chr14	106592676	106593347	106593011	ENSG00000211967.3	-	IG_V_gene	KNOWN	IGHV3-53	1	2	-0.024150
chr14	106599670	106599924	106599797	ENSG00000253714.1	-	IG_V_pseudogene	KNOWN	IGHVII-53-1	1	1	-0.024150
chr14	106601346	106601792	106601569	ENSG00000275475.1	-	IG_V_pseudogene	KNOWN	IGHV3-54	1	2	-0.024150
chr14	106606101	106606551	106606326	ENSG00000254395.1	-	IG_V_pseudogene	KNOWN	IGHV4-55	1	2	-0.024150
chr14	106609762	106610196	106609979	ENSG00000253131.1	-	IG_V_pseudogene	KNOWN	IGHV7-56	1	2	-0.074078
chr14	106618894	106619173	106619033	ENSG00000253759.1	-	IG_V_pseudogene	KNOWN	IGHV3-57	1	1	-0.134143
chr14	106622357	106622855	106622606	ENSG00000211968.3	-	IG_V_gene	KNOWN	IGHV1-58	1	2	-0.134143
chr14	106627249	106627825	106627537	ENSG00000224373.3	-	IG_V_gene	KNOWN	IGHV4-59	1	2	-0.134143
chr14	106631197	106631653	106631425	ENSG00000253742.1	-	IG_V_pseudogene	KNOWN	IGHV3-60	1	2	-0.397393
chr14	106636672	106636786	106636729	ENSG00000199480.1	+	rRNA	KNOWN	RNA5SP389	1	1	-0.397393
chr14	106636704	106636763	106636733	ENSG00000280494.1	+	miRNA	NOVEL	AC245369.1	1	1	-0.397393
chr14	106637718	106637973	106637845	ENSG00000254329.1	-	IG_V_pseudogene	KNOWN	IGHVII-60-1	1	1	-0.397393
chr14	106639119	106639657	106639388	ENSG00000211970.3	-	IG_V_gene	KNOWN	IGHV4-61	1	2	-0.397393
chr14	106643132	106658258	106650695	ENSG00000223648.3	-	IG_V_gene	KNOWN	IGHV3-64	2	2	-0.290705
chr14	106643142	106643585	106643363	ENSG00000253132.1	-	IG_V_pseudogene	KNOWN	IGHV3-62	1	2	-0.397393
chr14	106650551	106650785	106650668	ENSG00000253747.1	-	IG_V_pseudogene	KNOWN	IGHVII-62-1	1	1	-0.201999
chr14	106652237	106652681	106652459	ENSG00000253936.1	-	IG_V_pseudogene	KNOWN	IGHV3-63	1	2	-0.201999
chr14	106666092	106666532	106666312	ENSG00000253209.1	-	IG_V_pseudogene	KNOWN	IGHV3-65	1	2	-0.201999
chr14	106671797	106672044	106671920	ENSG00000253169.1	-	IG_V_pseudogene	KNOWN	IGHVII-65-1	1	1	-0.140299
chr14	106675017	106675544	106675280	ENSG00000211972.2	-	IG_V_gene	KNOWN	IGHV3-66	1	2	-0.140299
chr14	106680603	106681042	106680822	ENSG00000253274.1	-	IG_V_pseudogene	KNOWN	IGHV1-67	1	2	-0.140299
chr14	106683395	106684350	106683872	ENSG00000223506.2	-	processed_pseudogene	KNOWN	SLC20A1P1	1	1	-0.140299
chr14	106686517	106686562	106686539	ENSG00000253820.1	-	IG_V_pseudogene	KNOWN	IGHVII-67-1	1	1	-0.140299
chr14	106687113	106687200	106687156	ENSG00000254036.1	-	IG_V_pseudogene	KNOWN	IGHVIII-67-2	1	1	-0.140299
chr14	106692657	106692888	106692772	ENSG00000253635.1	-	IG_V_pseudogene	KNOWN	IGHVIII-67-3	1	1	-0.393435
chr14	106695102	106695397	106695249	ENSG00000254052.1	-	IG_V_pseudogene	KNOWN	IGHVIII-67-4	1	1	-0.393435
chr14	106703846	106704299	106704072	ENSG00000282359.1	-	IG_V_gene	KNOWN	CH17-212P11.6	1	2	-0.393435
chr14	106703852	106704146	106703999	ENSG00000253703.1	-	IG_V_pseudogene	KNOWN	IGHV1-68	1	1	-0.393435
chr14	106714684	106715181	106714932	ENSG00000211973.2	-	IG_V_gene	KNOWN	IGHV1-69	1	2	-0.234236
chr14	106723574	106724093	106723833	ENSG00000211974.3	-	IG_V_gene	KNOWN	IGHV2-70	1	2	-0.234236
chr14	106728163	106728607	106728385	ENSG00000282600.1	-	IG_V_pseudogene	KNOWN	CH17-212P11.4	1	2	-0.234236
chr14	106737110	106737547	106737328	ENSG00000281990.1	-	IG_V_gene	KNOWN	CH17-212P11.5	1	2	0.139298
chr14	106762092	106762588	106762340	ENSG00000280411.1	-	IG_V_gene	KNOWN	IGHV1-69-2	1	2	0.006262
chr14	106770577	106771020	106770798	ENSG00000274576.2	-	IG_V_gene	KNOWN	IGHV2-70	1	2	0.011573
chr14	106775157	106775618	106775387	ENSG00000254056.1	-	IG_V_pseudogene	KNOWN	IGHV3-71	1	2	0.011573
chr14	106790691	106791233	106790962	ENSG00000225698.3	-	IG_V_gene	KNOWN	IGHV3-72	2	2	-0.247495
chr14	106802694	106803233	106802963	ENSG00000211976.2	-	IG_V_gene	KNOWN	IGHV3-73	1	2	-0.247495
chr14	106810442	106811131	106810786	ENSG00000224650.2	-	IG_V_gene	KNOWN	IGHV3-74	1	2	-0.370043
chr14	106821174	106821414	106821294	ENSG00000254134.1	-	IG_V_pseudogene	KNOWN	IGHVII-74-1	1	1	-0.370043
chr14	106823687	106824147	106823917	ENSG00000254176.1	-	IG_V_pseudogene	KNOWN	IGHV3-75	1	2	-0.370043
chr14	106827869	106828163	106828016	ENSG00000253247.1	-	IG_V_pseudogene	KNOWN	IGHV3-76	1	1	-0.370043
chr14	106831767	106832052	106831909	ENSG00000253310.1	-	IG_V_pseudogene	KNOWN	IGHVIII-76-1	1	1	-0.205844
chr14	106850885	106850999	106850942	ENSG00000265929.1	-	miRNA	KNOWN	MIR5195	1	1	-0.029024
chr14	106851123	106851417	106851270	ENSG00000211978.2	-	IG_V_pseudogene	KNOWN	IGHV5-78	1	1	-0.029024
chr14	106865627	106865895	106865761	ENSG00000253674.1	-	IG_V_pseudogene	KNOWN	IGHVII-78-1	1	1	-0.029024
chr14	106867660	106868092	106867876	ENSG00000275747.1	-	IG_V_pseudogene	KNOWN	IGHV3-79	1	2	-0.029024
chr14	106874583	106875071	106874827	ENSG00000211979.2	-	IG_V_gene	KNOWN	IGHV7-81	1	2	-0.110398
chr14	106879563	106879812	106879687	ENSG00000253303.1	-	IG_V_pseudogene	KNOWN	IGHVIII-82	1	1	-0.110398
chr14_GL000009v2_random	56140	58376	57258	ENSG00000278704.1	-	protein_coding	KNOWN	BX004987.4	1	1	NA
chr14_GL000009v2_random	81325	81401	81363	ENSG00000273977.2	-	miRNA	NOVEL	BX004987.1	1	1	NA
chr14_GL000009v2_random	94511	94593	94552	ENSG00000274522.1	-	miRNA	NOVEL	BX004987.2	1	1	NA
chr14_GL000009v2_random	94751	94833	94792	ENSG00000275188.1	-	miRNA	NOVEL	BX004987.3	1	1	NA
chr14_GL000194v1_random	53590	115018	84304	ENSG00000277400.1	-	protein_coding	KNOWN	AC145212.4	1	3	NA
chr14_GL000194v1_random	53594	115055	84324	ENSG00000274847.1	-	protein_coding	KNOWN	AC145212.2	1	4	NA
chr14_GL000194v1_random	84477	84559	84518	ENSG00000276705.1	-	miRNA	NOVEL	AC145212.3	1	1	NA
chr14_GL000194v1_random	84813	84895	84854	ENSG00000273795.1	-	miRNA	NOVEL	AC145212.1	1	1	NA
chr14_GL000225v1_random	37718	37800	37759	ENSG00000273924.1	+	miRNA	NOVEL	AL671532.1	1	1	NA
chr14_GL000225v1_random	54184	54263	54223	ENSG00000275492.1	+	miRNA	NOVEL	AL671532.2	1	1	NA
chr14_GL000225v1_random	59451	59530	59490	ENSG00000277384.1	+	miRNA	NOVEL	AL671532.6	1	1	NA
chr14_GL000225v1_random	78620	78702	78661	ENSG00000276865.1	-	miRNA	NOVEL	AL671532.5	1	1	NA
chr14_GL000225v1_random	89078	89160	89119	ENSG00000275753.1	-	miRNA	NOVEL	AL671532.3	1	1	NA
chr14_GL000225v1_random	104136	104218	104177	ENSG00000277915.1	-	miRNA	NOVEL	AL671532.7	1	1	NA
chr14_GL000225v1_random	135634	135717	135675	ENSG00000276091.1	-	miRNA	NOVEL	AL671532.4	1	1	NA
chr14_GL000225v1_random	183252	183364	183308	ENSG00000276711.1	+	snRNA	NOVEL	U2	1	1	NA
chr14_KI270722v1_random	106375	106457	106416	ENSG00000275007.1	+	miRNA	NOVEL	AC138774.3	1	1	NA
chr14_KI270722v1_random	106569	106649	106609	ENSG00000274795.1	+	miRNA	NOVEL	AC138774.2	1	1	NA
chr14_KI270722v1_random	112435	112516	112475	ENSG00000274117.1	+	miRNA	NOVEL	AC138774.1	1	1	NA
chr14_KI270722v1_random	134480	134563	134521	ENSG00000275514.1	-	miRNA	NOVEL	AC138774.4	1	1	NA
chr14_KI270723v1_random	32133	32228	32180	ENSG00000276946.1	-	miRNA	NOVEL	AC242006.1	1	1	NA
chr14_KI270723v1_random	36026	36107	36066	ENSG00000278858.1	+	miRNA	NOVEL	AC242006.2	1	1	NA
chr14_KI270724v1_random	1529	1607	1568	ENSG00000277107.1	-	miRNA	NOVEL	AC242209.2	1	1	NA
chr14_KI270724v1_random	5374	5469	5421	ENSG00000274264.1	+	miRNA	NOVEL	AC242209.1	1	1	NA
chr14_KI270726v1_random	26241	26534	26387	ENSG00000277856.1	+	protein_coding	NOVEL	AC233755.2	1	1	NA
chr14_KI270726v1_random	41444	41876	41660	ENSG00000275063.1	+	protein_coding	NOVEL	AC233755.1	1	2	NA
chr15	19878555	19887814	19883184	ENSG00000215567.5	+	unprocessed_pseudogene	KNOWN	RP11-79C23.1	1	6	-0.299838
chr15	19883614	19883716	19883665	ENSG00000201241.1	+	snRNA	KNOWN	RNU6-978P	1	1	-0.299838
chr15	19899334	19899559	19899446	ENSG00000258463.1	+	processed_pseudogene	KNOWN	RP11-173D3.3	1	1	-0.104232
chr15	19955300	19955602	19955451	ENSG00000274347.1	-	unprocessed_pseudogene	KNOWN	RP11-1360M22.10	1	1	-0.208053
chr15	19964666	19965101	19964883	ENSG00000188403.7	-	IG_V_gene	KNOWN	IGHV1OR15-9	1	2	-0.208053
chr15	19967414	19968352	19967883	ENSG00000258706.1	-	processed_pseudogene	KNOWN	SLC20A1P3	1	1	-0.208053
chr15	19972782	19973218	19973000	ENSG00000259337.4	-	IG_V_pseudogene	KNOWN	IGHV1OR15-2	1	2	-0.323046
chr15	19987656	19988117	19987886	ENSG00000259490.2	-	IG_V_gene	KNOWN	IGHV3OR15-7	1	2	-0.323046
chr15	20003840	20003862	20003851	ENSG00000270961.1	-	IG_D_gene	KNOWN	IGHD5OR15-5A	1	1	-0.510937
chr15	20004797	20004815	20004806	ENSG00000271317.1	-	IG_D_gene	KNOWN	IGHD4OR15-4A	1	1	-0.510937
chr15	20005905	20005935	20005920	ENSG00000282520.1	-	IG_D_gene	KNOWN	IGHD3OR15-3A	1	1	-0.510937
chr15	20008402	20008432	20008417	ENSG00000282599.1	-	IG_D_gene	KNOWN	IGHD2OR15-2A	1	1	-0.510937
chr15	20011153	20011169	20011161	ENSG00000271336.1	-	IG_D_gene	KNOWN	IGHD1OR15-1A	1	1	0.049179
chr15	20012741	20014208	20013474	ENSG00000277988.1	+	unprocessed_pseudogene	KNOWN	KIAA0125P1	1	3	0.049179
chr15	20046296	20047994	20047145	ENSG00000259769.1	-	processed_pseudogene	KNOWN	RP11-1360M22.2	1	1	0.084256
chr15	20073699	20074334	20074016	ENSG00000258397.1	-	processed_pseudogene	KNOWN	BCAR1P1	1	1	0.044463
chr15	20095733	20096029	20095881	ENSG00000239471.3	-	misc_RNA	KNOWN	RN7SL584P	1	1	0.294300
chr15	20128745	20147953	20138349	ENSG00000258410.1	-	lincRNA	KNOWN	RP11-173D3.1	1	4	-0.271233
chr15	20141794	20146430	20144112	ENSG00000278935.1	+	TEC	KNOWN	RP11-173D3.4	1	1	-0.306039
chr15	20153776	20160826	20157301	ENSG00000258780.1	+	unprocessed_pseudogene	KNOWN	BMS1P15	1	9	0.135713
chr15	20228620	20277503	20253061	ENSG00000258628.1	-	unprocessed_pseudogene	KNOWN	RP11-492D6.3	1	13	-0.011594
chr15	20282744	20291586	20287165	ENSG00000259156.7	+	transcribed_unprocessed_pseudogene	KNOWN	CHEK2P2	3	6	-0.128834
chr15	20344736	20359166	20351951	ENSG00000258654.1	+	lincRNA	KNOWN	RP11-509A17.3	3	2	0.104466
chr15	20358108	20358181	20358144	ENSG00000265002.1	+	miRNA	NOVEL	AC026495.1	1	1	0.205916
chr15	20379495	20506180	20442837	ENSG00000180229.12	-	transcribed_unprocessed_pseudogene	KNOWN	HERC2P3	13	27	-0.149431
chr15	20516252	20520627	20518439	ENSG00000258488.2	+	unprocessed_pseudogene	KNOWN	RP11-467L19.8	1	4	0.122526
chr15	20531856	20541800	20536828	ENSG00000277322.1	-	protein_coding	KNOWN	GOLGA6L6	1	9	0.304721
chr15	20545576	20549444	20547510	ENSG00000258797.2	-	unprocessed_pseudogene	KNOWN	RP11-467L19.6	1	4	0.304721
chr15	20562375	20575696	20569035	ENSG00000181984.11	+	unprocessed_pseudogene	KNOWN	GOLGA8CP	1	18	0.097550
chr15	20570886	20571175	20571030	ENSG00000278497.1	+	misc_RNA	KNOWN	RN7SL759P	1	1	0.149579
chr15	20572047	20572129	20572088	ENSG00000221354.1	+	miRNA	NOVEL	AC023310.1	1	1	0.149579
chr15	20593494	20599195	20596344	ENSG00000258916.2	-	unprocessed_pseudogene	KNOWN	SPATA31E2P	1	3	0.279619
chr15	20626819	20627365	20627092	ENSG00000258707.2	-	processed_pseudogene	KNOWN	RP11-467L19.11	1	1	-0.107317
chr15	20639464	20639890	20639677	ENSG00000270685.1	-	IG_V_pseudogene	KNOWN	IGHV1OR15-6	1	2	-0.076984
chr15	20642799	20643448	20643123	ENSG00000278626.1	-	lincRNA	KNOWN	RP11-467L19.16	1	1	-0.076984
chr15	20657638	20688408	20673023	ENSG00000258590.5	-	transcribed_unprocessed_pseudogene	KNOWN	NBEAP1	2	8	-0.567119
chr15	20658900	20664970	20661935	ENSG00000279628.1	+	TEC	KNOWN	RP11-467L19.14	2	1	-0.204726
chr15	20729747	20756183	20742965	ENSG00000260409.1	-	lincRNA	KNOWN	RP11-403B2.7	1	2	-0.591499
chr15	20738679	20738785	20738732	ENSG00000238478.1	+	snRNA	KNOWN	RNU6-498P	1	1	-0.707096
chr15	20755375	20755460	20755417	ENSG00000273699.1	-	miRNA	NOVEL	AC012414.1	1	1	-0.241746
chr15	20759311	20774794	20767052	ENSG00000259383.1	-	lincRNA	KNOWN	RP11-403B2.6	1	2	-0.232801
chr15	20773084	20774871	20773977	ENSG00000259443.1	+	lincRNA	KNOWN	RP11-403B2.5	1	2	-0.212863
chr15	20775464	20775998	20775731	ENSG00000258420.1	-	processed_pseudogene	KNOWN	RP11-403B2.3	1	1	-0.212863
chr15	20803505	20826173	20814839	ENSG00000274499.1	-	transcribed_processed_pseudogene	KNOWN	RP11-403B2.10	2	3	-0.124165
chr15	20813299	20814958	20814128	ENSG00000259089.2	+	unprocessed_pseudogene	KNOWN	GRAMD4P5	1	3	-0.245878
chr15	20826454	20826640	20826547	ENSG00000259214.1	-	processed_pseudogene	KNOWN	RP11-810K23.7	1	1	-0.245878
chr15	20832795	20832869	20832832	ENSG00000265322.1	+	miRNA	KNOWN	MIR3118-2	1	1	-0.225349
chr15	20835372	20866314	20850843	ENSG00000230031.10	-	protein_coding	KNOWN	POTEB2	2	11	-0.422834
chr15	20855251	20855357	20855304	ENSG00000238489.1	-	snRNA	KNOWN	RNU6-749P	1	1	-0.599886
chr15	20890206	20890606	20890406	ENSG00000261048.1	-	processed_pseudogene	KNOWN	RP11-810K23.9	1	1	-0.929703
chr15	20893383	20893980	20893681	ENSG00000261554.1	-	processed_pseudogene	KNOWN	RP11-810K23.10	1	1	-0.929703
chr15	20901441	20901609	20901525	ENSG00000258799.1	-	processed_pseudogene	KNOWN	ZNF519P2	1	1	-0.929703
chr15	20916686	20935658	20926172	ENSG00000270831.1	-	unprocessed_pseudogene	KNOWN	NF1P1	1	17	-0.289372
chr15	20940252	20940333	20940292	ENSG00000266545.1	+	miRNA	KNOWN	MIR5701-1	1	1	0.189603
chr15	20940438	20993303	20966870	ENSG00000258710.7	+	lincRNA	KNOWN	LINC01193	5	5	-0.162164
chr15	20960675	20961581	20961128	ENSG00000258855.1	+	transcribed_unprocessed_pseudogene	KNOWN	OR11J2P	1	1	-0.079489
chr15	20969282	20970215	20969748	ENSG00000258494.1	-	processed_pseudogene	KNOWN	OR11J5P	1	1	-0.167536
chr15	21010494	21010516	21010505	ENSG00000270824.1	-	IG_D_gene	KNOWN	IGHD5OR15-5B	1	1	0.109374
chr15	21011451	21011469	21011460	ENSG00000270451.1	-	IG_D_gene	KNOWN	IGHD4OR15-4B	1	1	0.109374
chr15	21012559	21012589	21012574	ENSG00000282089.1	-	IG_D_gene	KNOWN	IGHD3OR15-3B	1	1	0.109374
chr15	21015048	21015078	21015063	ENSG00000282268.1	-	IG_D_gene	KNOWN	IGHD2OR15-2B	1	1	0.109374
chr15	21017800	21017816	21017808	ENSG00000270185.1	-	IG_D_gene	KNOWN	IGHD1OR15-1B	1	1	0.109374
chr15	21019388	21020851	21020119	ENSG00000259698.1	+	unprocessed_pseudogene	KNOWN	KIAA0125P2	1	3	0.109374
chr15	21053004	21054702	21053853	ENSG00000259025.1	-	processed_pseudogene	KNOWN	RP11-810K23.6	1	1	-0.122747
chr15	21080812	21081447	21081129	ENSG00000258771.1	-	processed_pseudogene	KNOWN	BCAR1P2	1	1	-0.056107
chr15	21102843	21103138	21102990	ENSG00000243059.3	-	misc_RNA	KNOWN	RN7SL400P	1	1	0.128704
chr15	21127698	21130095	21128896	ENSG00000260986.1	-	lincRNA	KNOWN	RP11-854K16.3	1	2	0.286686
chr15	21148334	21152970	21150652	ENSG00000279595.1	+	TEC	KNOWN	RP11-854K16.4	1	1	-0.039988
chr15	21160305	21167357	21163831	ENSG00000258684.2	+	unprocessed_pseudogene	KNOWN	BMS1P16	1	8	0.107099
chr15	21250180	21260147	21255163	ENSG00000258883.1	-	unprocessed_pseudogene	KNOWN	RP11-32B5.2	1	3	-0.413648
chr15	21293653	21295201	21294427	ENSG00000237161.4	-	processed_pseudogene	KNOWN	RP11-32B5.1	1	1	-0.208563
chr15	21298233	21325241	21311737	ENSG00000247765.2	-	lincRNA	KNOWN	RP11-32B5.7	1	2	-0.330596
chr15	21307749	21307855	21307802	ENSG00000207289.1	+	snRNA	KNOWN	RNU6-1235P	1	1	-0.208563
chr15	21324433	21324518	21324475	ENSG00000276038.1	-	miRNA	NOVEL	AC068446.1	1	1	-0.424799
chr15	21328380	21343881	21336130	ENSG00000280881.1	-	lincRNA	KNOWN	RP11-275E15.2	1	2	0.045213
chr15	21342171	21343958	21343064	ENSG00000280703.1	+	lincRNA	KNOWN	RP11-275E15.3	1	2	0.100029
chr15	21344548	21345085	21344816	ENSG00000258415.2	-	processed_pseudogene	KNOWN	RP11-32B5.4	1	1	0.100029
chr15	21368459	21370621	21369540	ENSG00000268531.3	+	lincRNA	KNOWN	RP11-32B5.8	1	1	0.156637
chr15	21372793	21373881	21373337	ENSG00000258712.2	-	processed_pseudogene	KNOWN	CXADRP2	1	1	-0.101780
chr15	21382383	21382842	21382612	ENSG00000258767.1	+	processed_pseudogene	KNOWN	RP11-32B5.5	1	1	-0.101780
chr15	21383821	21384064	21383942	ENSG00000258848.1	+	processed_pseudogene	KNOWN	GRAMD4P6	1	1	-0.101780
chr15	21406385	21406459	21406422	ENSG00000277243.1	+	miRNA	KNOWN	MIR3118-3	1	1	-0.549554
chr15	21408243	21440451	21424347	ENSG00000278522.4	-	protein_coding	KNOWN	POTEB3	3	11	-0.377813
chr15	21428879	21428985	21428932	ENSG00000275174.1	-	snRNA	NOVEL	U6	1	1	-0.352108
chr15	21490364	21509404	21499884	ENSG00000281347.2	-	transcribed_unprocessed_pseudogene	KNOWN	NF1P9	2	12	-0.278846
chr15	21513959	21514040	21513999	ENSG00000277841.1	+	miRNA	KNOWN	MIR5701-2	1	1	-0.404840
chr15	21514144	21567053	21540598	ENSG00000280724.1	+	lincRNA	KNOWN	RP11-11H9.2	1	5	-0.445267
chr15	21552795	21653276	21603035	ENSG00000280709.2	+	lincRNA	KNOWN	RP11-983G14.1	2	11	-0.538874
chr15	21574225	21575207	21574716	ENSG00000279639.2	-	unprocessed_pseudogene	KNOWN	RP11-294C11.7	1	1	-0.671568
chr15	21637909	21638992	21638450	ENSG00000182974.3	+	protein_coding	KNOWN	RP11-294C11.1	1	1	-0.424023
chr15	21651844	21653039	21652441	ENSG00000279408.2	+	protein_coding	KNOWN	RP11-294C11.3	2	2	-0.428265
chr15	21683038	21683962	21683500	ENSG00000279445.2	+	unprocessed_pseudogene	KNOWN	OR4N3P	1	1	-0.572824
chr15	21703428	21705627	21704527	ENSG00000281113.1	-	lincRNA	KNOWN	RP11-294C11.6	1	2	0.034506
chr15	21709649	21710270	21709959	ENSG00000281087.1	-	processed_pseudogene	KNOWN	RP11-983G14.3	1	1	0.091276
chr15	21717808	21718245	21718026	ENSG00000281179.1	-	IG_V_gene	KNOWN	RP11-294C11.4	1	2	0.164596
chr15	21735506	21735945	21735725	ENSG00000281550.1	-	IG_V_pseudogene	KNOWN	RP11-294C11.5	1	2	0.017030
chr15	21742364	21742799	21742581	ENSG00000278263.2	-	IG_V_gene	KNOWN	RP11-294C11.2	1	2	0.017030
chr15	21752278	21752710	21752494	ENSG00000280655.1	-	IG_V_pseudogene	KNOWN	RP11-361C13.1	1	2	-0.405508
chr15	21843750	21843824	21843787	ENSG00000265793.1	+	miRNA	KNOWN	MIR3118-4	1	1	0.204467
chr15	21846329	21877703	21862016	ENSG00000233917.8	-	protein_coding	KNOWN	POTEB	4	11	-0.259085
chr15	21866210	21866316	21866263	ENSG00000200790.1	-	snRNA	KNOWN	RNU6-631P	1	1	-0.374576
chr15	21911559	21912590	21912074	ENSG00000258585.2	-	processed_pseudogene	KNOWN	ZNF519P3	1	1	-0.414361
chr15	21927657	21946641	21937149	ENSG00000258997.1	-	unprocessed_pseudogene	KNOWN	NF1P2	1	16	-0.431259
chr15	21951242	21951323	21951282	ENSG00000264902.1	+	miRNA	KNOWN	MIR5701-3	1	1	-0.522718
chr15	21980321	21981209	21980765	ENSG00000258786.1	-	processed_pseudogene	KNOWN	RP11-928F19.3	1	1	-0.295031
chr15	21990061	22125546	22057803	ENSG00000259176.5	+	sense_overlapping	KNOWN	RP11-69H14.6	14	7	-0.494622
chr15	22009548	22010529	22010038	ENSG00000258721.2	-	processed_pseudogene	KNOWN	OR11H3P	1	1	-0.625114
chr15	22030931	22031834	22031382	ENSG00000259324.1	-	processed_pseudogene	KNOWN	OR11K1P	1	1	-0.662896
chr15	22044864	22045399	22045131	ENSG00000258652.2	+	processed_pseudogene	KNOWN	OR4Q1P	1	1	-0.662896
chr15	22056709	22057949	22057329	ENSG00000261277.2	+	transcribed_processed_pseudogene	KNOWN	OR4H6P	2	1	-0.208313
chr15	22080527	22081659	22081093	ENSG00000274102.1	+	protein_coding	KNOWN	OR4M2	1	1	-0.284384
chr15	22094431	22095556	22094993	ENSG00000183706.4	+	protein_coding	KNOWN	OR4N4	1	1	-0.586080
chr15	22125618	22126435	22126026	ENSG00000259435.2	+	processed_pseudogene	KNOWN	OR4N3P	1	1	-0.447528
chr15	22145939	22148226	22147082	ENSG00000260739.1	-	lincRNA	KNOWN	RP11-2F9.4	1	2	-0.278120
chr15	22152276	22152897	22152586	ENSG00000223877.4	-	processed_pseudogene	KNOWN	RPS8P10	1	1	-0.250533
chr15	22160431	22160868	22160649	ENSG00000270505.1	-	IG_V_gene	KNOWN	IGHV1OR15-1	1	2	-0.250533
chr15	22178107	22178542	22178324	ENSG00000271288.1	-	IG_V_pseudogene	KNOWN	IGHV1OR15-3	1	2	-0.216130
chr15	22184967	22185402	22185184	ENSG00000259261.2	-	IG_V_gene	KNOWN	IGHV4OR15-8	1	2	-0.216130
chr15	22194885	22195317	22195101	ENSG00000270356.1	-	IG_V_pseudogene	KNOWN	IGHV1OR15-4	1	2	-0.526918
chr15	22202392	22202734	22202563	ENSG00000271507.1	-	unprocessed_pseudogene	KNOWN	RP11-603B24.6	1	1	-0.526918
chr15	22225278	22225329	22225303	ENSG00000221641.1	-	miRNA	KNOWN	MIR1268A	1	1	0.197485
chr15	22258138	22258848	22258493	ENSG00000259098.1	+	processed_pseudogene	KNOWN	RP11-603B24.2	1	1	0.122112
chr15	22278971	22282872	22280921	ENSG00000258732.1	+	unprocessed_pseudogene	KNOWN	RP11-603B24.1	1	2	-0.090600
chr15	22360639	22360918	22360778	ENSG00000274835.1	+	unprocessed_pseudogene	KNOWN	RP11-566K19.11	1	1	1.009530
chr15	22371736	22373570	22372653	ENSG00000273679.1	+	processed_pseudogene	KNOWN	RP11-566K19.8	1	1	-0.029999
chr15	22401208	22406944	22404076	ENSG00000274279.1	+	unprocessed_pseudogene	KNOWN	SPATA31E3P	1	4	-0.197515
chr15	22427039	22437902	22432470	ENSG00000185182.14	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA8DP	2	18	0.099114
chr15	22428246	22428328	22428287	ENSG00000221000.1	-	miRNA	NOVEL	AC100757.1	1	1	0.209124
chr15	22429200	22429489	22429344	ENSG00000274568.1	-	misc_RNA	KNOWN	RN7SL545P	1	1	0.209124
chr15	22451209	22455154	22453181	ENSG00000275363.1	+	unprocessed_pseudogene	KNOWN	RP11-566K19.12	1	3	-0.087714
chr15	22458903	22469230	22464066	ENSG00000277865.4	+	protein_coding	KNOWN	GOLGA6L22	2	11	-0.087714
chr15	22480439	22484840	22482639	ENSG00000281909.1	-	unprocessed_pseudogene	KNOWN	RP11-439M15.1	1	4	0.398653
chr15	22495570	22590815	22543192	ENSG00000276550.4	+	transcribed_unprocessed_pseudogene	KNOWN	HERC2P2	5	32	0.099643
chr15	22607540	22617854	22612697	ENSG00000277561.4	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA8IP	2	18	0.294537
chr15	22608148	22608230	22608189	ENSG00000274728.1	-	miRNA	NOVEL	AC091565.1	1	1	-0.056331
chr15	22609141	22609377	22609259	ENSG00000277515.1	-	misc_RNA	KNOWN	RN7SL495P	1	1	-0.056331
chr15	22664359	22686213	22675286	ENSG00000276141.4	+	transcribed_unprocessed_pseudogene	KNOWN	WHAMMP3	4	11	0.158395
chr15	22690454	22691158	22690806	ENSG00000277435.1	-	processed_pseudogene	KNOWN	RP11-1180F24.1	1	1	-0.060011
chr15	22714939	22715225	22715082	ENSG00000277867.1	+	processed_pseudogene	KNOWN	AC138649.1	1	1	-0.120417
chr15	22727104	22744918	22736011	ENSG00000275325.4	+	transcribed_unprocessed_pseudogene	KNOWN	PDCD6IPP1	2	7	-0.132981
chr15	22756172	22756729	22756450	ENSG00000277755.1	-	processed_pseudogene	KNOWN	RP11-26F2.2	1	2	0.059570
chr15	22757857	22778741	22768299	ENSG00000274253.4	+	sense_overlapping	KNOWN	RP11-566K19.6	3	5	0.221174
chr15	22770523	22776199	22773361	ENSG00000259425.5	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-566K19.5	4	7	0.445629
chr15	22773063	22829791	22801427	ENSG00000170113.15	+	protein_coding	KNOWN	NIPA1	7	7	0.495274
chr15	22838641	22868384	22853512	ENSG00000140157.14	+	protein_coding	KNOWN	NIPA2	10	8	0.447036
chr15	22867052	22981063	22924057	ENSG00000273749.4	-	protein_coding	KNOWN	CYFIP1	14	32	0.604444
chr15	22983192	23039673	23011432	ENSG00000275835.4	-	protein_coding	KNOWN	TUBGCP5	9	24	0.412044
chr15	23083094	23121324	23102209	ENSG00000276172.1	+	transcribed_unprocessed_pseudogene	KNOWN	ELMO2P1	2	8	-0.186968
chr15	23128268	23136822	23132545	ENSG00000273976.1	-	protein_coding	KNOWN	GOLGA6L1	1	9	-0.067286
chr15	23140563	23144422	23142492	ENSG00000277505.1	-	unprocessed_pseudogene	KNOWN	RP11-467N20.6	1	4	0.026897
chr15	23157366	23170711	23164038	ENSG00000175676.15	+	transcribed_unprocessed_pseudogene	KNOWN	GOLGA8EP	2	19	0.098392
chr15	23165897	23166186	23166041	ENSG00000273981.1	+	misc_RNA	KNOWN	RN7SL106P	1	1	0.091992
chr15	23167058	23167140	23167099	ENSG00000238347.1	+	miRNA	NOVEL	AC116165.1	1	1	0.091992
chr15	23179869	23182049	23180959	ENSG00000274099.1	+	processed_pseudogene	KNOWN	ABCB10P1	1	1	0.211952
chr15	23193491	23193696	23193593	ENSG00000278541.1	+	processed_pseudogene	KNOWN	RP11-467N20.8	1	1	-0.029753
chr15	23197827	23197920	23197873	ENSG00000276941.1	+	miRNA	KNOWN	MIR4509-1	1	1	-0.029753
chr15	23225876	23226391	23226133	ENSG00000278552.1	-	unprocessed_pseudogene	KNOWN	RP11-467N20.7	1	2	-0.282074
chr15	23289303	23293667	23291485	ENSG00000259414.1	-	unprocessed_pseudogene	KNOWN	HERC2P7	1	4	0.331391
chr15	23309607	23313276	23311441	ENSG00000274471.1	+	unprocessed_pseudogene	KNOWN	RP11-228M15.1	1	6	0.224334
chr15	23326256	23334127	23330191	ENSG00000273756.4	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-566K19.9	2	10	0.255904
chr15	23337985	23341848	23339916	ENSG00000260399.1	-	unprocessed_pseudogene	KNOWN	RP11-529J17.5	1	4	0.289029
chr15	23354748	23367231	23360989	ENSG00000261739.2	+	protein_coding	KNOWN	GOLGA8S	2	19	0.134427
chr15	23361206	23361274	23361240	ENSG00000275876.1	+	miRNA	NOVEL	AC100756.2	1	1	0.134427
chr15	23363272	23363561	23363416	ENSG00000278222.1	+	misc_RNA	KNOWN	RN7SL536P	1	1	0.134427
chr15	23364444	23364526	23364485	ENSG00000238737.1	+	miRNA	NOVEL	AC100756.1	1	1	0.134427
chr15	23430839	23435212	23433025	ENSG00000261418.1	+	unprocessed_pseudogene	KNOWN	RP11-529J17.3	1	4	0.369287
chr15	23439498	23447234	23443366	ENSG00000174450.11	-	protein_coding	KNOWN	GOLGA6L2	4	9	0.369287
chr15	23562062	23562131	23562096	ENSG00000265673.1	-	miRNA	KNOWN	MIR4508	1	1	-0.417957
chr15	23565678	23630075	23597876	ENSG00000179455.7	+	protein_coding	KNOWN	MKRN3	5	3	-0.160994
chr15	23565857	23566366	23566111	ENSG00000281873.1	-	protein_coding	KNOWN	AC126407.1	1	2	-0.417957
chr15	23567264	23569657	23568460	ENSG00000260978.1	-	antisense	KNOWN	MKRN3-AS1	1	2	-0.417957
chr15	23643544	23647841	23645692	ENSG00000254585.2	-	protein_coding	KNOWN	MAGEL2	1	1	-0.196439
chr15	23685400	23687330	23686365	ENSG00000182636.5	-	protein_coding	KNOWN	NDN	1	1	-0.416705
chr15	23777437	23777543	23777490	ENSG00000206616.1	-	snRNA	KNOWN	RNU6-741P	1	1	-0.134436
chr15	23912409	23941716	23927062	ENSG00000261622.1	+	lincRNA	KNOWN	RP11-484P15.1	1	6	-0.320133
chr15	23975172	24003435	23989303	ENSG00000260232.1	+	lincRNA	KNOWN	PWRN4	1	4	-0.512749
chr15	24162754	24169948	24166351	ENSG00000260551.1	-	lincRNA	KNOWN	PWRN2	3	2	-0.174523
chr15	24206784	24225854	24216319	ENSG00000260780.1	+	lincRNA	KNOWN	RP11-580I1.1	1	3	-0.426440
chr15	24235078	24276829	24255953	ENSG00000261621.1	+	lincRNA	KNOWN	RP11-580I1.2	2	3	-0.318298
chr15	24238145	24240192	24239168	ENSG00000260959.1	-	lincRNA	KNOWN	RP11-350A1.2	1	2	-0.211077
chr15	24299749	24300638	24300193	ENSG00000261598.1	+	lincRNA	KNOWN	RP11-107D24.2	1	2	-0.589058
chr15	24441127	24447967	24444547	ENSG00000260760.1	+	lincRNA	KNOWN	PWRN3	1	4	-0.243943
chr15	24493137	24652130	24572633	ENSG00000259905.5	+	lincRNA	KNOWN	PWRN1	12	9	-0.259379
chr15	24675868	24683393	24679630	ENSG00000185823.3	+	protein_coding	KNOWN	NPAP1	1	1	-0.165806
chr15	24823637	24978723	24901180	ENSG00000128739.21	+	protein_coding	KNOWN	SNRPN	10	13	-0.079207
chr15	24848357	24852253	24850305	ENSG00000280118.1	+	TEC	KNOWN	RP11-385H1.1	1	1	-0.161104
chr15	24908932	24909825	24909378	ENSG00000241061.3	-	processed_pseudogene	KNOWN	RPL5P1	1	1	-0.126648
chr15	24910874	24911125	24910999	ENSG00000242088.1	-	processed_pseudogene	KNOWN	AC090602.2	1	1	0.148575
chr15	24954986	24977850	24966418	ENSG00000273173.5	+	protein_coding	KNOWN	SNURF	3	7	0.050363
chr15	24955034	25000276	24977655	ENSG00000214265.11	+	protein_coding	KNOWN	RP11-701H24.9	2	8	-0.043703
chr15	24978583	25419462	25199022	ENSG00000224078.12	+	processed_transcript	KNOWN	SNHG14	24	39	-0.019012
chr15	24981994	24982068	24982031	ENSG00000276314.1	+	snoRNA	KNOWN	SNORD107	1	1	-0.079863
chr15	24984864	24985173	24985018	ENSG00000270704.3	+	sense_intronic	KNOWN	RP11-701H24.5	1	1	-0.079863
chr15	24985053	24988232	24986642	ENSG00000279192.1	+	TEC	KNOWN	PWAR5	1	1	-0.079863
chr15	24985100	24985166	24985133	ENSG00000276610.1	+	snoRNA	KNOWN	SNORD64	1	1	-0.079863
chr15	24986925	24986995	24986960	ENSG00000239014.1	+	snoRNA	KNOWN	SNORD108	1	1	-0.079863
chr15	24991486	24991753	24991619	ENSG00000271347.1	+	sense_intronic	KNOWN	RP11-701H24.7	1	1	-0.209472
chr15	25027736	25032047	25029891	ENSG00000257647.1	-	lincRNA	KNOWN	RP11-701H24.3	1	2	-0.300547
chr15	25031873	25036490	25034181	ENSG00000257151.1	+	lincRNA	KNOWN	PWAR6	1	1	-0.349846
chr15	25041918	25042428	25042173	ENSG00000270246.3	+	sense_intronic	KNOWN	RP11-701H24.8	1	1	-0.349846
chr15	25041974	25042040	25042007	ENSG00000274640.1	+	snoRNA	KNOWN	SNORD109A	1	1	-0.349846
chr15	25051477	25051571	25051524	ENSG00000207063.1	+	snoRNA	KNOWN	SNORD116-1	1	1	0.035408
chr15	25054210	25054304	25054257	ENSG00000207001.1	+	snoRNA	KNOWN	SNORD116-2	1	1	0.035408
chr15	25056860	25056954	25056907	ENSG00000207014.1	+	snoRNA	KNOWN	SNORD116-3	1	1	0.035408
chr15	25059538	25059633	25059585	ENSG00000275529.1	+	snoRNA	KNOWN	SNORD116-4	1	1	0.035408
chr15	25062333	25062427	25062380	ENSG00000207191.1	+	snoRNA	KNOWN	SNORD116-5	1	1	0.035408
chr15	25065026	25065121	25065073	ENSG00000207442.1	+	snoRNA	KNOWN	SNORD116-6	1	1	0.035408
chr15	25067788	25067882	25067835	ENSG00000207133.1	+	snoRNA	KNOWN	SNORD116-7	1	1	0.035408
chr15	25070432	25070526	25070479	ENSG00000207093.1	+	snoRNA	KNOWN	SNORD116-8	1	1	0.415313
chr15	25073107	25073201	25073154	ENSG00000206727.1	+	snoRNA	KNOWN	SNORD116-9	1	1	0.415313
chr15	25074114	25074215	25074164	ENSG00000200661.1	+	snoRNA	KNOWN	SNORD116-10	1	1	0.415313
chr15	25075929	25076020	25075974	ENSG00000206609.1	+	snoRNA	KNOWN	SNORD116-11	1	1	0.415313
chr15	25077051	25077142	25077096	ENSG00000207197.1	+	snoRNA	KNOWN	SNORD116-12	1	1	0.415313
chr15	25079058	25079149	25079103	ENSG00000207137.1	+	snoRNA	KNOWN	SNORD116-13	1	1	0.415313
chr15	25080142	25080233	25080187	ENSG00000206621.1	+	snoRNA	KNOWN	SNORD116-14	1	1	0.415313
chr15	25081287	25081378	25081332	ENSG00000207174.1	+	snoRNA	KNOWN	SNORD116-15	1	1	0.415313
chr15	25082768	25082859	25082813	ENSG00000207263.1	+	snoRNA	KNOWN	SNORD116-16	1	1	0.415313
chr15	25083588	25083679	25083633	ENSG00000206656.1	+	snoRNA	KNOWN	SNORD116-17	1	1	0.415313
chr15	25085385	25085476	25085430	ENSG00000206688.1	+	snoRNA	KNOWN	SNORD116-18	1	1	0.415313
chr15	25086527	25086618	25086572	ENSG00000207460.1	+	snoRNA	KNOWN	SNORD116-19	1	1	0.415313
chr15	25087661	25088896	25088278	ENSG00000261069.3	+	lincRNA	KNOWN	RP11-701H24.4	1	1	0.415313
chr15	25087662	25087753	25087707	ENSG00000278715.1	+	snoRNA	KNOWN	SNORD116-20	1	1	0.415313
chr15	25088804	25088895	25088849	ENSG00000277785.1	+	snoRNA	KNOWN	SNORD116-21	1	1	0.415313
chr15	25089923	25090014	25089968	ENSG00000275127.1	+	snoRNA	KNOWN	SNORD116-22	1	1	0.419817
chr15	25091786	25091877	25091831	ENSG00000207375.1	+	snoRNA	KNOWN	SNORD116-23	1	1	0.442639
chr15	25091960	25092377	25092168	ENSG00000279735.1	-	protein_coding	KNOWN	AC124312.1	1	1	0.442639
chr15	25094037	25094128	25094082	ENSG00000207279.1	+	snoRNA	KNOWN	SNORD116-24	1	1	0.442639
chr15	25097663	25097754	25097708	ENSG00000252326.1	+	snoRNA	KNOWN	SNORD116-25	1	1	0.442639
chr15	25099499	25099594	25099546	ENSG00000251815.1	+	snoRNA	KNOWN	SNORD116-26	1	1	0.442639
chr15	25101575	25101666	25101620	ENSG00000251896.1	+	snoRNA	KNOWN	SNORD116-27	1	1	0.442639
chr15	25104642	25104732	25104687	ENSG00000278123.1	+	snoRNA	KNOWN	SNORD116-28	1	1	0.442639
chr15	25106521	25106603	25106562	ENSG00000207245.1	+	snoRNA	KNOWN	SNORD116-29	1	1	0.442639
chr15	25108268	25108352	25108310	ENSG00000252277.1	+	snoRNA	KNOWN	SNORD116-30	1	1	0.442639
chr15	25130978	25131337	25131157	ENSG00000270523.1	+	sense_intronic	KNOWN	RP11-145P16.3	1	1	-0.466881
chr15	25135642	25138055	25136848	ENSG00000279050.1	+	TEC	KNOWN	PWAR1	1	1	-0.466881
chr15	25159221	25159279	25159250	ENSG00000212428.1	+	snoRNA	NOVEL	SNORD115	1	1	-0.121715
chr15	25169337	25169676	25169506	ENSG00000270814.1	-	processed_pseudogene	KNOWN	TMEM261P1	1	1	-0.121715
chr15	25170723	25170804	25170763	ENSG00000201831.1	+	snoRNA	KNOWN	SNORD115-1	1	1	0.180348
chr15	25172635	25172716	25172675	ENSG00000199712.1	+	snoRNA	KNOWN	SNORD115-2	1	1	0.180348
chr15	25174927	25175008	25174967	ENSG00000199970.1	+	snoRNA	KNOWN	SNORD115-3	1	1	0.180348
chr15	25176832	25176913	25176872	ENSG00000200680.1	+	snoRNA	KNOWN	SNORD115-4	1	1	0.180348
chr15	25178738	25178819	25178778	ENSG00000200503.1	+	snoRNA	KNOWN	SNORD115-5	1	1	0.180348
chr15	25180497	25180578	25180537	ENSG00000200812.1	+	snoRNA	KNOWN	SNORD115-6	1	1	0.180348
chr15	25182385	25182466	25182425	ENSG00000278089.1	+	snoRNA	KNOWN	SNORD115-7	1	1	0.180348
chr15	25184306	25184387	25184346	ENSG00000200726.1	+	snoRNA	KNOWN	SNORD115-8	1	1	0.180348
chr15	25185631	25185712	25185671	ENSG00000199782.1	+	snoRNA	KNOWN	SNORD115-9	1	1	0.180348
chr15	25187536	25187616	25187576	ENSG00000201943.1	+	snoRNA	KNOWN	SNORD115-10	1	1	0.180348
chr15	25189414	25189495	25189454	ENSG00000200486.1	+	snoRNA	KNOWN	SNORD115-11	1	1	0.180348
chr15	25191416	25191497	25191456	ENSG00000199453.1	+	snoRNA	KNOWN	SNORD115-12	1	1	0.529613
chr15	25193321	25193402	25193361	ENSG00000273835.1	+	snoRNA	KNOWN	SNORD115-13	1	1	0.529613
chr15	25194921	25195001	25194961	ENSG00000199960.1	+	snoRNA	KNOWN	SNORD115-14	1	1	0.529613
chr15	25197576	25197656	25197616	ENSG00000201679.1	+	snoRNA	KNOWN	SNORD115-15	1	1	0.529613
chr15	25199448	25199529	25199488	ENSG00000200757.1	+	snoRNA	KNOWN	SNORD115-16	1	1	0.529613
chr15	25201323	25201404	25201363	ENSG00000201482.1	+	snoRNA	KNOWN	SNORD115-17	1	1	0.529613
chr15	25203227	25203308	25203267	ENSG00000200163.1	+	snoRNA	KNOWN	SNORD115-18	1	1	0.529613
chr15	25204357	25204438	25204397	ENSG00000199968.1	+	snoRNA	KNOWN	SNORD115-19	1	1	0.529613
chr15	25206262	25206343	25206302	ENSG00000201969.1	+	snoRNA	KNOWN	SNORD115-20	1	1	0.529613
chr15	25208083	25208163	25208123	ENSG00000199833.1	+	snoRNA	KNOWN	SNORD115-21	1	1	0.529613
chr15	25209918	25209999	25209958	ENSG00000201326.1	+	snoRNA	KNOWN	SNORD115-22	1	1	0.529613
chr15	25211796	25211877	25211836	ENSG00000201331.1	+	snoRNA	KNOWN	SNORD115-23	1	1	0.398653
chr15	25213648	25213729	25213688	ENSG00000200398.1	+	snoRNA	KNOWN	SNORD115-24	1	1	0.398653
chr15	25215541	25215622	25215581	ENSG00000199489.1	+	snoRNA	KNOWN	SNORD115-25	1	1	0.398653
chr15	25218617	25218698	25218657	ENSG00000275524.1	+	snoRNA	KNOWN	SNORD115-26	1	1	0.398653
chr15	25220497	25220578	25220537	ENSG00000201300.1	+	snoRNA	KNOWN	SNORD115-27	1	1	0.398653
chr15	25222348	25222428	25222388	ENSG00000200801.1	+	snoRNA	KNOWN	SNORD115-28	1	1	0.398653
chr15	25223246	25223327	25223286	ENSG00000199704.1	+	snoRNA	KNOWN	SNORD115-29	1	1	0.398653
chr15	25225203	25225284	25225243	ENSG00000200987.1	+	snoRNA	KNOWN	SNORD115-30	1	1	0.398653
chr15	25227109	25227190	25227149	ENSG00000202188.1	+	snoRNA	KNOWN	SNORD115-31	1	1	0.398653
chr15	25228967	25229048	25229007	ENSG00000200949.1	+	snoRNA	KNOWN	SNORD115-32	1	1	0.398653
chr15	25230838	25230919	25230878	ENSG00000200593.1	+	snoRNA	KNOWN	SNORD115-33	1	1	0.528091
chr15	25232387	25232468	25232427	ENSG00000199311.1	+	snoRNA	KNOWN	SNORD115-34	1	1	0.528091
chr15	25234247	25234328	25234287	ENSG00000201992.1	+	snoRNA	KNOWN	SNORD115-35	1	1	0.528091
chr15	25236085	25236166	25236125	ENSG00000202499.1	+	snoRNA	KNOWN	SNORD115-36	1	1	0.528091
chr15	25237986	25238067	25238026	ENSG00000200638.1	+	snoRNA	KNOWN	SNORD115-37	1	1	0.528091
chr15	25239838	25239919	25239878	ENSG00000201907.1	+	snoRNA	KNOWN	SNORD115-38	1	1	0.528091
chr15	25241746	25241827	25241786	ENSG00000200564.1	+	snoRNA	KNOWN	SNORD115-39	1	1	0.528091
chr15	25243614	25243695	25243654	ENSG00000272460.1	+	snoRNA	KNOWN	SNORD115-40	1	1	0.528091
chr15	25245478	25245559	25245518	ENSG00000200478.1	+	snoRNA	KNOWN	SNORD115-41	1	1	0.528091
chr15	25247345	25247426	25247385	ENSG00000201143.1	+	snoRNA	KNOWN	SNORD115-42	1	1	0.528091
chr15	25249198	25249279	25249238	ENSG00000202373.1	+	snoRNA	KNOWN	SNORD115-43	1	1	0.528091
chr15	25250859	25250940	25250899	ENSG00000202261.1	+	snoRNA	KNOWN	SNORD115-44	1	1	0.267276
chr15	25255579	25257027	25256303	ENSG00000280234.1	+	TEC	KNOWN	RP11-145P16.2	1	1	0.267276
chr15	25264510	25264590	25264550	ENSG00000212380.1	+	snoRNA	KNOWN	SNORD115-45	1	1	0.267276
chr15	25266591	25266661	25266626	ENSG00000276844.1	+	snoRNA	KNOWN	SNORD115-46	1	1	0.267276
chr15	25268466	25268551	25268508	ENSG00000212528.1	+	snoRNA	KNOWN	SNORD115-47	1	1	0.267276
chr15	25269783	25269858	25269820	ENSG00000201634.1	+	snoRNA	KNOWN	SNORD115-48	1	1	0.267276
chr15	25278343	25278409	25278376	ENSG00000239169.1	+	snoRNA	KNOWN	SNORD109B	1	1	-0.247983
chr15	25333728	25439056	25386392	ENSG00000114062.17	-	protein_coding	KNOWN	UBE3A	23	15	-0.091766
chr15	25345633	25347235	25346434	ENSG00000261529.1	-	sense_intronic	KNOWN	RP13-487P22.1	1	1	0.058243
chr15	25484831	25578791	25531811	ENSG00000235731.1	-	lincRNA	KNOWN	AC124997.1	1	4	-0.072556
chr15	25580969	25581122	25581045	ENSG00000223628.2	+	processed_pseudogene	KNOWN	AC023449.2	1	1	-0.289879
chr15	25677273	25865172	25771222	ENSG00000206190.11	-	protein_coding	KNOWN	ATP10A	7	22	0.487315
chr15	25708470	25710869	25709669	ENSG00000274307.1	-	sense_intronic	KNOWN	RP11-345J18.2	1	1	0.380901
chr15	25738508	25738620	25738564	ENSG00000222123.1	+	rRNA	KNOWN	RNA5SP390	1	1	0.515345
chr15	25817983	25818070	25818026	ENSG00000281355.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.511009
chr15	25848747	25848825	25848786	ENSG00000266517.1	-	miRNA	KNOWN	MIR4715	1	1	0.356587
chr15	25865295	25877211	25871253	ENSG00000259011.1	+	lincRNA	KNOWN	RP11-2C7.1	1	2	0.539081
chr15	25902360	26053120	25977740	ENSG00000206187.3	+	lincRNA	KNOWN	RP11-1084I9.1	2	5	0.160046
chr15	25928146	25928575	25928360	ENSG00000258965.2	-	processed_pseudogene	KNOWN	RP11-446P9.1	1	1	0.369287
chr15	26008940	26009074	26009007	ENSG00000212604.1	-	snoRNA	NOVEL	SNORA48	1	1	0.245615
chr15	26050538	26052276	26051407	ENSG00000258931.1	-	lincRNA	KNOWN	RP11-1084I9.2	1	2	-0.103559
chr15	26115813	26133037	26124425	ENSG00000259150.5	+	lincRNA	KNOWN	LINC00929	5	6	-0.220525
chr15	26395072	26446774	26420923	ENSG00000235160.1	+	lincRNA	KNOWN	AC009878.2	2	3	-0.103134
chr15	26543546	26939539	26741542	ENSG00000166206.13	-	protein_coding	KNOWN	GABRB3	16	10	-0.182414
chr15	26557598	26557937	26557767	ENSG00000278840.1	-	sense_intronic	KNOWN	RP11-345N11.1	1	1	0.041068
chr15	26657030	26658763	26657896	ENSG00000235518.2	-	lincRNA	KNOWN	AC011196.3	1	2	-0.102920
chr15	26851132	26851610	26851371	ENSG00000242793.1	-	processed_pseudogene	KNOWN	AC135999.2	1	1	-0.275984
chr15	26866363	26949207	26907785	ENSG00000186297.11	+	protein_coding	KNOWN	GABRA5	11	11	-0.142515
chr15	26964917	26970385	26967651	ENSG00000259122.2	+	unprocessed_pseudogene	KNOWN	TVP23BP1	1	2	-0.151821
chr15	26971282	27541991	27256636	ENSG00000182256.12	+	protein_coding	KNOWN	GABRG3	8	10	-0.192885
chr15	27157615	27161319	27159467	ENSG00000228740.2	-	antisense	KNOWN	GABRG3-AS1	1	3	-0.587749
chr15	27208089	27208635	27208362	ENSG00000214254.3	-	processed_pseudogene	KNOWN	AC136896.2	1	1	-0.141068
chr15	27280318	27280436	27280377	ENSG00000200326.1	-	rRNA	KNOWN	RNA5SP391	1	1	-0.567303
chr15	27340524	27340804	27340664	ENSG00000258624.1	+	processed_pseudogene	KNOWN	SERPINE4P	1	1	-0.043096
chr15	27362310	27366398	27364354	ENSG00000261426.1	+	sense_intronic	KNOWN	AC144833.1	1	1	-0.197515
chr15	27418796	27420735	27419765	ENSG00000258970.1	-	antisense	KNOWN	RP11-100M12.1	1	2	0.065025
chr15	27422381	27428338	27425359	ENSG00000259152.1	+	sense_intronic	KNOWN	RP11-100M12.2	1	2	0.065025
chr15	27449182	27449242	27449212	ENSG00000275847.1	+	miRNA	NOVEL	AC104002.1	1	1	-0.352192
chr15	27483035	27541991	27512513	ENSG00000259168.1	-	antisense	KNOWN	RP11-100M12.3	2	2	-0.068006
chr15	27621534	27629289	27625411	ENSG00000258594.1	+	lincRNA	KNOWN	RP11-30G8.2	1	3	-0.539921
chr15	27684498	27685768	27685133	ENSG00000258853.1	-	lincRNA	KNOWN	RP11-30G8.1	1	2	0.135061
chr15	27754875	28099358	27927116	ENSG00000104044.15	-	protein_coding	KNOWN	OCA2	4	24	-0.049788
chr15	27775621	27776798	27776209	ENSG00000232394.1	+	antisense	KNOWN	AC090696.2	1	2	0.043357
chr15	27895704	27896582	27896143	ENSG00000228992.2	+	processed_pseudogene	KNOWN	RPL5P32	1	1	-0.040004
chr15	28111040	28322152	28216596	ENSG00000128731.15	-	protein_coding	KNOWN	HERC2	12	93	0.235100
chr15	28315651	28316059	28315855	ENSG00000256338.2	+	processed_pseudogene	KNOWN	RPL41P2	1	1	-0.032399
chr15	28332237	28336609	28334423	ENSG00000261401.1	+	unprocessed_pseudogene	KNOWN	RP11-578F21.3	1	4	0.367270
chr15	28346490	28346647	28346568	ENSG00000261561.1	+	unprocessed_pseudogene	KNOWN	RP11-536P16.2	1	1	0.367270
chr15	28349051	28358080	28353565	ENSG00000237850.7	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-483E23.2	2	9	0.419402
chr15	28362796	28365731	28364263	ENSG00000261497.1	-	unprocessed_pseudogene	KNOWN	RP11-483E23.3	1	3	0.425518
chr15	28378621	28392018	28385319	ENSG00000153684.14	+	protein_coding	KNOWN	GOLGA8F	6	19	0.011007
chr15	28387196	28387485	28387340	ENSG00000276891.1	+	misc_RNA	KNOWN	RN7SL238P	1	1	-0.031837
chr15	28388369	28388451	28388410	ENSG00000221050.1	+	miRNA	NOVEL	AC091304.1	1	1	-0.031837
chr15	28402868	28405033	28403950	ENSG00000261524.1	+	processed_pseudogene	KNOWN	ABCB10P3	1	1	0.252456
chr15	28416449	28416674	28416561	ENSG00000276928.1	+	unprocessed_pseudogene	KNOWN	RP11-483E23.9	1	1	-0.447937
chr15	28422172	28422373	28422272	ENSG00000274532.1	+	unprocessed_pseudogene	KNOWN	RP11-483E23.10	1	1	-0.447937
chr15	28426491	28426584	28426537	ENSG00000266039.1	+	miRNA	KNOWN	MIR4509-2	1	1	-0.447937
chr15	28454660	28457783	28456221	ENSG00000260159.1	-	unprocessed_pseudogene	KNOWN	RP11-483E23.4	1	3	0.011373
chr15	28473322	28473448	28473385	ENSG00000261365.1	-	unprocessed_pseudogene	KNOWN	RP11-483E23.5	1	1	-0.189190
chr15	28490752	28490845	28490798	ENSG00000263964.1	-	miRNA	KNOWN	MIR4509-3	1	1	-0.052398
chr15	28494975	28495182	28495078	ENSG00000274814.1	-	unprocessed_pseudogene	KNOWN	RP11-536P16.5	1	1	-0.052398
chr15	28506625	28508808	28507716	ENSG00000260053.2	-	processed_pseudogene	KNOWN	ABCB10P4	1	1	-0.052398
chr15	28519611	28533014	28526312	ENSG00000183629.13	-	protein_coding	KNOWN	GOLGA8G	8	19	-0.058260
chr15	28523185	28523267	28523226	ENSG00000238607.1	-	miRNA	NOVEL	AC138749.1	1	1	-0.126507
chr15	28524151	28524440	28524295	ENSG00000276955.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.126507
chr15	28545912	28549777	28547844	ENSG00000261041.1	+	unprocessed_pseudogene	KNOWN	RP11-536P16.4	1	4	0.176881
chr15	28553638	28561379	28557508	ENSG00000227717.4	+	unprocessed_pseudogene	KNOWN	RP11-578F21.4	1	8	0.253959
chr15	28564986	28565152	28565069	ENSG00000260444.1	-	unprocessed_pseudogene	KNOWN	RP11-483E23.7	1	1	0.253959
chr15	28575019	28579400	28577209	ENSG00000261581.1	-	unprocessed_pseudogene	KNOWN	HERC2P11	1	4	0.453760
chr15	28589492	28685264	28637378	ENSG00000206149.10	+	transcribed_unprocessed_pseudogene	KNOWN	HERC2P9	8	33	0.064825
chr15	28679405	28682252	28680828	ENSG00000254398.1	-	unprocessed_pseudogene	KNOWN	RP11-578F21.2	1	3	0.022729
chr15	28701954	28738384	28720169	ENSG00000188626.6	-	protein_coding	KNOWN	GOLGA8M	2	19	0.149776
chr15	28702562	28702644	28702603	ENSG00000238340.1	-	miRNA	NOVEL	AC055876.2	1	1	0.226293
chr15	28703554	28703790	28703672	ENSG00000274632.1	-	misc_RNA	KNOWN	RN7SL719P	1	1	0.226293
chr15	28719377	28738431	28728904	ENSG00000261480.1	-	lincRNA	KNOWN	RP11-578F21.6	1	2	0.111920
chr15	28737583	28759204	28748393	ENSG00000248334.6	+	transcribed_unprocessed_pseudogene	KNOWN	WHAMMP2	3	8	0.052087
chr15	28763440	28764151	28763795	ENSG00000260844.2	-	processed_pseudogene	KNOWN	RP11-578F21.9	1	1	0.054024
chr15	28788243	28792002	28790122	ENSG00000232431.3	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-578F21.10	2	2	-0.012485
chr15	28789199	28789486	28789342	ENSG00000256951.1	+	transcribed_processed_pseudogene	KNOWN	AC055876.1	1	1	-0.009704
chr15	28789664	28859007	28824335	ENSG00000261377.5	+	transcribed_unprocessed_pseudogene	KNOWN	PDCD6IPP2	7	7	-0.209738
chr15	28830619	28831182	28830900	ENSG00000271616.1	-	processed_pseudogene	KNOWN	RP11-578F21.13	1	2	-0.436108
chr15	28842235	28848675	28845455	ENSG00000261649.5	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA6L7P	2	8	-0.436108
chr15	28857882	28858398	28858140	ENSG00000270301.1	-	processed_pseudogene	KNOWN	WI2-2334D6.1	1	1	0.129860
chr15	28884483	29118315	29001399	ENSG00000034053.14	+	protein_coding	KNOWN	APBA2	12	16	0.148675
chr15	28970196	28977464	28973830	ENSG00000259277.1	-	antisense	KNOWN	RP13-126C7.1	1	2	-0.136709
chr15	29120254	29570723	29345488	ENSG00000104059.4	-	protein_coding	KNOWN	FAM189A1	4	11	0.002491
chr15	29233673	29235137	29234405	ENSG00000259299.1	-	processed_pseudogene	KNOWN	RP11-37J13.1	1	1	-0.153121
chr15	29233868	29233979	29233923	ENSG00000252868.1	+	snoRNA	NOVEL	snoZ278	1	1	-0.153121
chr15	29268149	29269829	29268989	ENSG00000185115.4	-	protein_coding	KNOWN	NDNL2	1	1	-0.229936
chr15	29373602	29376956	29375279	ENSG00000259690.1	-	sense_intronic	KNOWN	CTD-3118D7.1	1	1	-0.007544
chr15	29609676	29611212	29610444	ENSG00000259814.1	-	lincRNA	KNOWN	RP11-300A12.2	1	1	0.157719
chr15	29612570	29614274	29613422	ENSG00000259300.2	+	processed_pseudogene	KNOWN	TUBBP8	1	2	0.276416
chr15	29674990	29680957	29677973	ENSG00000256802.2	+	antisense	KNOWN	RP11-680F8.1	2	2	0.260968
chr15	29699367	29968865	29834116	ENSG00000104067.16	-	protein_coding	KNOWN	TJP1	12	28	0.067879
chr15	29728186	29729531	29728858	ENSG00000259644.1	-	sense_intronic	KNOWN	RP11-680F8.4	1	1	-0.127885
chr15	29730713	29730985	29730849	ENSG00000234664.1	+	processed_pseudogene	KNOWN	HMGN2P5	1	1	-0.074200
chr15	29822631	29824081	29823356	ENSG00000259523.1	+	antisense	KNOWN	RP11-680F8.3	1	1	-0.123468
chr15	30005205	30006430	30005817	ENSG00000259749.1	+	unprocessed_pseudogene	KNOWN	NCAPGP2	1	2	-0.081340
chr15	30005443	30045848	30025645	ENSG00000259647.1	-	lincRNA	KNOWN	RP11-143J24.1	1	2	0.102504
chr15	30044455	30045296	30044875	ENSG00000260174.1	+	processed_pseudogene	KNOWN	CTD-2022H16.3	1	2	0.157415
chr15	30052942	30073064	30063003	ENSG00000229389.1	-	lincRNA	KNOWN	CTD-2022H16.1	1	4	0.077620
chr15	30083053	30093499	30088276	ENSG00000179938.12	+	protein_coding	KNOWN	GOLGA8J	2	19	0.037066
chr15	30091662	30091898	30091780	ENSG00000273818.1	+	misc_RNA	KNOWN	RN7SL673P	1	1	0.030329
chr15	30092809	30092891	30092850	ENSG00000221250.1	+	miRNA	NOVEL	AC120045.1	1	1	0.030329
chr15	30098826	30102093	30100459	ENSG00000261792.1	-	unprocessed_pseudogene	KNOWN	DNM1P28	1	3	0.030329
chr15	30103720	30131757	30117738	ENSG00000178081.12	+	transcribed_unprocessed_pseudogene	KNOWN	ULK4P3	5	5	0.043132
chr15	30112198	30112330	30112264	ENSG00000207432.1	+	snoRNA	NOVEL	U8	1	1	0.039250
chr15	30135149	30145567	30140358	ENSG00000261247.1	+	protein_coding	KNOWN	GOLGA8T	2	19	0.133019
chr15	30143733	30143969	30143851	ENSG00000277637.1	+	misc_RNA	KNOWN	RN7SL469P	1	1	0.133019
chr15	30144877	30144959	30144918	ENSG00000221785.1	+	miRNA	NOVEL	AC120045.2	1	1	0.133019
chr15	30150872	30153409	30152140	ENSG00000260897.1	-	unprocessed_pseudogene	KNOWN	DNM1P30	1	3	0.415689
chr15	30153933	30154110	30154021	ENSG00000261747.3	-	unprocessed_pseudogene	KNOWN	RP11-932O9.3	1	1	0.415689
chr15	30170563	30179943	30175253	ENSG00000259906.1	-	lincRNA	KNOWN	RP11-932O9.4	2	3	-0.008313
chr15	30196036	30214540	30205288	ENSG00000225930.3	+	lincRNA	KNOWN	DKFZP434L187	2	3	0.129310
chr15	30223017	30225564	30224290	ENSG00000259993.1	+	processed_pseudogene	KNOWN	RP11-261B23.1	1	1	-0.373061
chr15	30254402	30254508	30254455	ENSG00000206972.1	-	snRNA	KNOWN	RNU6-17P	1	1	0.176654
chr15	30282533	30288389	30285461	ENSG00000270955.1	+	processed_pseudogene	KNOWN	RP11-261B23.2	1	10	-0.068862
chr15	30344307	30348236	30346271	ENSG00000279417.1	-	TEC	KNOWN	RP11-382B18.1	1	1	-0.351615
chr15	30355436	30355540	30355488	ENSG00000238783.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.028598
chr15	30357766	30393849	30375807	ENSG00000166664.13	-	protein_coding	KNOWN	CHRFAM7A	7	11	-0.103192
chr15	30380353	30386987	30383670	ENSG00000263070.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-382B18.3	1	4	-0.179968
chr15	30384959	30385091	30385025	ENSG00000238519.1	-	snoRNA	NOVEL	U8	1	1	-0.179968
chr15	30395146	30396368	30395757	ENSG00000274966.1	+	unprocessed_pseudogene	KNOWN	RP11-382B18.6	1	2	0.058633
chr15	30403740	30414162	30408951	ENSG00000186399.10	-	protein_coding	KNOWN	GOLGA8R	2	19	0.143587
chr15	30404349	30404431	30404390	ENSG00000221723.1	-	miRNA	NOVEL	AC019322.1	1	1	0.058633
chr15	30405307	30405597	30405452	ENSG00000274424.1	-	misc_RNA	KNOWN	RN7SL196P	1	1	0.058633
chr15	30420283	30420429	30420356	ENSG00000271333.1	-	unprocessed_pseudogene	KNOWN	RP11-382B18.5	1	1	0.271315
chr15	30470779	30507623	30489201	ENSG00000215302.8	+	transcribed_unprocessed_pseudogene	KNOWN	CTD-3092A11.1	4	6	0.012491
chr15	30487963	30490313	30489138	ENSG00000270055.1	+	sense_intronic	KNOWN	CTD-3092A11.2	1	1	-0.049168
chr15	30516079	30517867	30516973	ENSG00000260784.1	+	unprocessed_pseudogene	KNOWN	AC026150.6	1	3	0.070723
chr15	30540093	30545969	30543031	ENSG00000260693.1	+	lincRNA	KNOWN	AC026150.8	1	3	0.172162
chr15	30552078	30562501	30557289	ENSG00000178115.11	+	protein_coding	KNOWN	GOLGA8Q	2	19	-0.169903
chr15	30560644	30560934	30560789	ENSG00000277031.1	+	misc_RNA	KNOWN	RN7SL796P	1	1	-0.169903
chr15	30561810	30561892	30561851	ENSG00000221593.1	+	miRNA	NOVEL	AC026150.2	1	1	-0.169903
chr15	30567822	30571089	30569455	ENSG00000259890.1	-	unprocessed_pseudogene	KNOWN	DNM1P50	1	3	-0.080037
chr15	30572738	30600647	30586692	ENSG00000260128.6	+	transcribed_unprocessed_pseudogene	KNOWN	ULK4P2	5	6	-0.089620
chr15	30581184	30581316	30581250	ENSG00000207430.1	+	snoRNA	NOVEL	U8	1	1	0.099448
chr15	30604126	30614561	30609343	ENSG00000261794.1	+	protein_coding	KNOWN	GOLGA8H	1	19	-0.160475
chr15	30607695	30608193	30607944	ENSG00000270016.1	-	antisense	KNOWN	RP11-932O9.8	1	1	-0.396109
chr15	30612724	30612960	30612842	ENSG00000277467.1	+	misc_RNA	KNOWN	RN7SL628P	1	1	0.142873
chr15	30613871	30613953	30613912	ENSG00000221358.1	+	miRNA	NOVEL	AC026150.1	1	1	0.142873
chr15	30616958	30617749	30617353	ENSG00000269930.1	+	lincRNA	KNOWN	RP11-932O9.9	1	1	0.142873
chr15	30616998	30625773	30621385	ENSG00000247728.2	-	antisense	KNOWN	RP11-932O9.7	1	2	0.142873
chr15	30624494	30772993	30698743	ENSG00000187951.10	+	protein_coding	KNOWN	ARHGAP11B	10	11	0.026724
chr15	30648797	30649529	30649163	ENSG00000269974.1	+	lincRNA	KNOWN	RP11-932O9.10	1	1	0.185101
chr15	30673750	30673843	30673796	ENSG00000206846.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.257342
chr15	30700663	30700747	30700705	ENSG00000280998.1	+	miRNA	NOVEL	AC091057.1	1	1	0.050373
chr15	30791573	30801859	30796716	ENSG00000103832.10	+	unprocessed_pseudogene	KNOWN	GOLGA8UP	1	19	0.053311
chr15	30800160	30800396	30800278	ENSG00000278696.1	+	misc_RNA	KNOWN	RN7SL82P	1	1	0.053311
chr15	30801306	30801388	30801347	ENSG00000221379.1	+	miRNA	NOVEL	AC004460.1	1	1	0.053311
chr15	30815271	30844153	30829712	ENSG00000259845.1	+	unprocessed_pseudogene	KNOWN	HERC2P10	1	16	-0.000015
chr15	30882267	30883231	30882749	ENSG00000260382.1	-	processed_pseudogene	KNOWN	RP11-540B6.2	1	1	0.091992
chr15	30899480	30900327	30899903	ENSG00000261628.1	+	unprocessed_pseudogene	KNOWN	RP11-540B6.3	1	2	-0.061814
chr15	30903852	30943108	30923480	ENSG00000198690.9	+	protein_coding	KNOWN	FAN1	8	16	0.210914
chr15	30926514	30928407	30927460	ENSG00000270015.1	+	sense_intronic	KNOWN	RP11-540B6.6	1	1	0.288684
chr15	30938941	30991607	30965274	ENSG00000166912.16	-	protein_coding	KNOWN	MTMR10	10	17	0.217979
chr15	30956248	30956350	30956299	ENSG00000212526.1	-	snRNA	KNOWN	RNU6-466P	1	1	0.201815
chr15	31001061	31161273	31081167	ENSG00000134160.13	-	protein_coding	KNOWN	TRPM1	12	28	0.379374
chr15	31002013	31042302	31022157	ENSG00000259720.1	+	antisense	KNOWN	RP11-348B17.1	2	4	0.323059
chr15	31065032	31065141	31065086	ENSG00000207702.1	-	miRNA	KNOWN	MIR211	1	1	0.439915
chr15	31216020	31224445	31220232	ENSG00000259448.2	+	lincRNA	KNOWN	RP11-16E12.1	2	2	0.184185
chr15	31221999	31230838	31226418	ENSG00000259772.6	-	lincRNA	KNOWN	RP11-16E12.2	5	4	0.187572
chr15	31326855	31435665	31381260	ENSG00000169926.9	+	protein_coding	KNOWN	KLF13	8	4	0.426929
chr15	31420128	31420662	31420395	ENSG00000259179.1	+	processed_pseudogene	KNOWN	UBE2CP4	1	1	0.138786
chr15	31453201	31454139	31453670	ENSG00000259696.2	-	processed_pseudogene	KNOWN	RP11-126F18.2	1	1	0.281470
chr15	31475398	31870789	31673093	ENSG00000169918.9	-	protein_coding	KNOWN	OTUD7A	4	11	-0.031334
chr15	31704945	31705029	31704987	ENSG00000280902.1	-	miRNA	NOVEL	AC026951.1	1	1	-0.109307
chr15	31765743	31768201	31766972	ENSG00000259358.1	-	processed_pseudogene	KNOWN	RP11-456J20.1	1	1	-0.290154
chr15	31787494	31787734	31787614	ENSG00000277500.1	+	unprocessed_pseudogene	KNOWN	RP11-456J20.2	1	1	-0.269465
chr15	31928303	31928434	31928368	ENSG00000206849.1	+	snoRNA	NOVEL	SNORA18	1	1	-0.184020
chr15	32030488	32172521	32101504	ENSG00000175344.16	+	protein_coding	KNOWN	CHRNA7	3	10	-0.267899
chr15	32175247	32175351	32175299	ENSG00000201084.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.231705
chr15	32182551	32186475	32184513	ENSG00000279912.1	+	TEC	KNOWN	RP11-624A21.1	1	1	-0.231705
chr15	32250302	32256125	32253213	ENSG00000271078.1	-	processed_pseudogene	KNOWN	RP13-395E19.4	1	10	-0.306874
chr15	32284152	32284258	32284205	ENSG00000207257.1	+	snRNA	KNOWN	RNU6-18P	1	1	-0.329589
chr15	32313126	32315654	32314390	ENSG00000260211.2	-	processed_pseudogene	KNOWN	RP13-395E19.2	1	1	-0.258107
chr15	32359538	32367784	32363661	ENSG00000260642.1	+	lincRNA	KNOWN	RP11-717I24.1	1	3	0.004529
chr15	32384937	32387484	32386210	ENSG00000261491.1	+	unprocessed_pseudogene	KNOWN	DNM1P31	1	3	-0.087642
chr15	32392782	32403292	32398037	ENSG00000249931.4	-	protein_coding	KNOWN	GOLGA8K	2	19	0.318907
chr15	32393390	32393472	32393431	ENSG00000221444.1	-	miRNA	NOVEL	AC139426.1	1	1	0.318907
chr15	32394365	32394613	32394489	ENSG00000275776.1	-	misc_RNA	KNOWN	RN7SL185P	1	1	0.318907
chr15	32398956	32435233	32417094	ENSG00000215304.3	-	processed_transcript	KNOWN	RP13-395E19.3	1	13	0.158965
chr15	32406597	32434992	32420794	ENSG00000261279.5	-	transcribed_unprocessed_pseudogene	KNOWN	ULK4P1	4	5	0.115382
chr15	32426288	32426420	32426354	ENSG00000206987.1	-	snoRNA	NOVEL	U8	1	1	0.053924
chr15	32436503	32439767	32438135	ENSG00000261708.1	+	unprocessed_pseudogene	KNOWN	DNM1P32	1	3	0.222886
chr15	32445106	32455634	32450370	ENSG00000206127.10	-	protein_coding	KNOWN	GOLGA8O	2	19	0.258371
chr15	32445715	32445797	32445756	ENSG00000221318.1	-	miRNA	NOVEL	AC135983.1	1	1	0.222886
chr15	32446674	32446964	32446819	ENSG00000274076.1	-	misc_RNA	KNOWN	RN7SL539P	1	1	0.222886
chr15	32461666	32461809	32461737	ENSG00000270789.1	-	processed_pseudogene	KNOWN	RP11-632K20.8	1	1	0.289184
chr15	32489267	32491586	32490426	ENSG00000261375.1	-	unprocessed_pseudogene	KNOWN	RP11-632K20.6	1	4	0.057175
chr15	32494003	32500346	32497174	ENSG00000254912.2	-	unprocessed_pseudogene	KNOWN	RP11-632K20.2	1	5	0.243198
chr15	32519848	32536926	32528387	ENSG00000223509.8	-	transcribed_processed_pseudogene	KNOWN	RP11-632K20.7	5	7	-0.151221
chr15	32536047	32587613	32561830	ENSG00000261064.1	+	lincRNA	KNOWN	RP11-1000B6.3	2	3	-0.237309
chr15	32583612	32584312	32583962	ENSG00000276724.1	+	sense_intronic	KNOWN	RP11-1000B6.7	1	1	-0.237510
chr15	32586105	32615158	32600631	ENSG00000262728.5	-	antisense	KNOWN	RP11-1000B6.8	3	3	0.117343
chr15	32593456	32607310	32600383	ENSG00000232653.8	+	protein_coding	KNOWN	GOLGA8N	7	19	0.201063
chr15	32602121	32602411	32602266	ENSG00000277464.1	+	misc_RNA	KNOWN	RN7SL286P	1	1	0.201063
chr15	32603287	32603369	32603328	ENSG00000221405.1	+	miRNA	NOVEL	AC123768.1	1	1	0.201063
chr15	32613733	32615111	32614422	ENSG00000244952.2	+	lincRNA	KNOWN	RP11-1000B6.5	1	3	0.060628
chr15	32615144	32639949	32627546	ENSG00000198826.10	+	protein_coding	KNOWN	ARHGAP11A	8	13	-0.053792
chr15	32641676	32697098	32669387	ENSG00000166922.8	+	protein_coding	KNOWN	SCG5	9	6	0.263016
chr15	32656084	32673065	32664574	ENSG00000241818.1	-	antisense	KNOWN	RP11-1000B6.2	2	4	0.318581
chr15	32717270	32719007	32718138	ENSG00000259721.1	-	lincRNA	KNOWN	RP11-758N13.1	2	2	0.336096
chr15	32717974	32745107	32731540	ENSG00000166923.10	+	protein_coding	KNOWN	GREM1	3	3	0.305196
chr15	32765545	33194733	32980139	ENSG00000248905.8	-	protein_coding	KNOWN	FMN1	12	21	0.047389
chr15	32836983	32837326	32837154	ENSG00000259392.2	-	transcribed_processed_pseudogene	KNOWN	RP11-758N13.3	1	1	0.255772
chr15	32970727	32970791	32970759	ENSG00000212415.1	+	snoRNA	NOVEL	SNORD77	1	1	0.091992
chr15	33012119	33013068	33012593	ENSG00000259686.1	+	processed_pseudogene	KNOWN	HNRNPA1P71	1	1	0.042804
chr15	33105758	33106236	33105997	ENSG00000279958.1	-	TEC	KNOWN	RP11-12O16.1	1	1	-0.080710
chr15	33235552	33247621	33241586	ENSG00000215296.9	-	unitary_pseudogene	KNOWN	TMCO5B	6	8	0.001537
chr15	33303657	33310659	33307158	ENSG00000259446.5	-	antisense	KNOWN	RP11-489D6.2	2	3	-0.061428
chr15	33310945	33866121	33588533	ENSG00000198838.12	+	protein_coding	KNOWN	RYR3	12	105	-0.207532
chr15	33722492	33722596	33722544	ENSG00000200008.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.161457
chr15	33850538	33851178	33850858	ENSG00000276702.1	-	antisense	KNOWN	RP11-3D4.4	1	1	0.277405
chr15	33851785	33856809	33854297	ENSG00000259408.2	-	antisense	KNOWN	RP11-3D4.3	1	3	0.277405
chr15	33858602	33864825	33861713	ENSG00000259287.2	-	antisense	KNOWN	RP11-3D4.2	1	2	0.277405
chr15	33866227	34039176	33952701	ENSG00000169857.7	-	protein_coding	KNOWN	AVEN	3	6	0.017170
chr15	33968720	34067457	34018088	ENSG00000184984.9	+	protein_coding	KNOWN	CHRM5	3	3	0.167281
chr15	33972059	33972515	33972287	ENSG00000278472.1	-	sense_intronic	KNOWN	RP11-74D7.3	1	1	-0.039253
chr15	33990686	33992048	33991367	ENSG00000259505.1	+	processed_pseudogene	KNOWN	RP11-74D7.1	1	2	0.162002
chr15	34084017	34101948	34092982	ENSG00000134153.9	-	protein_coding	KNOWN	EMC7	4	5	0.105424
chr15	34085911	34086314	34086112	ENSG00000243094.1	-	processed_pseudogene	KNOWN	RP11-1084A12.1	1	1	0.278405
chr15	34102073	34108684	34105378	ENSG00000182405.5	+	protein_coding	KNOWN	PGBD4	1	1	0.018825
chr15	34140674	34210096	34175385	ENSG00000134152.10	-	protein_coding	KNOWN	KATNBL1	17	10	0.087961
chr15	34224999	34230156	34227577	ENSG00000128463.12	+	protein_coding	KNOWN	EMC4	13	5	0.140915
chr15	34229996	34338060	34284028	ENSG00000140199.11	-	protein_coding	KNOWN	SLC12A6	20	26	-0.047073
chr15	34255286	34257832	34256559	ENSG00000259468.1	+	antisense	KNOWN	RP11-1084A12.2	1	2	-0.215063
chr15	34314728	34314828	34314778	ENSG00000207091.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.069896
chr15	34341713	34343177	34342445	ENSG00000182117.5	-	protein_coding	KNOWN	NOP10	2	2	-0.155446
chr15	34343315	34357737	34350526	ENSG00000184507.15	+	protein_coding	KNOWN	NUTM1	4	8	0.235459
chr15	34358618	34367278	34362948	ENSG00000176454.13	-	protein_coding	KNOWN	LPCAT4	10	15	0.573118
chr15	34373541	34374603	34374072	ENSG00000259904.1	-	processed_pseudogene	KNOWN	ACTG1P15	1	1	0.403453
chr15	34373789	34373871	34373830	ENSG00000266205.1	-	miRNA	NOVEL	AC025678.1	1	1	0.403453
chr15	34379068	34437466	34408267	ENSG00000175265.17	-	protein_coding	KNOWN	GOLGA8A	5	23	0.260375
chr15	34382069	34382150	34382109	ENSG00000221649.1	-	miRNA	KNOWN	MIR1233-1	1	1	0.403453
chr15	34394594	34394931	34394762	ENSG00000260639.1	+	processed_pseudogene	KNOWN	RP11-602M11.4	1	1	0.024564
chr15	34409625	34410594	34410109	ENSG00000261081.1	+	unprocessed_pseudogene	KNOWN	RP11-1H8.1	1	1	0.211667
chr15	34415450	34420273	34417861	ENSG00000279092.1	-	TEC	KNOWN	RP11-1H8.5	1	1	0.329275
chr15	34489002	34490571	34489786	ENSG00000259917.1	-	unprocessed_pseudogene	KNOWN	HNRNPLP2	1	1	-0.088750
chr15	34494420	34495900	34495160	ENSG00000261559.1	+	processed_pseudogene	KNOWN	FSCN1P1	1	1	0.153768
chr15	34520608	34521791	34521199	ENSG00000278582.1	+	unprocessed_pseudogene	KNOWN	RP11-1H8.6	1	2	-0.090662
chr15	34525207	34588503	34556855	ENSG00000215252.11	-	protein_coding	KNOWN	GOLGA8B	11	23	0.348177
chr15	34528290	34528371	34528330	ENSG00000221065.1	-	miRNA	KNOWN	MIR1233-2	1	1	-0.090662
chr15	34555870	34556820	34556345	ENSG00000259892.1	+	unprocessed_pseudogene	KNOWN	RP11-1H8.4	1	1	0.427278
chr15	34597458	34597558	34597508	ENSG00000252425.1	-	snoRNA	NOVEL	SNORA18	1	1	0.128891
chr15	34651135	34655764	34653449	ENSG00000261304.1	-	lincRNA	KNOWN	CTD-2125J1.1	1	4	0.147335
chr15	34751032	34754965	34752998	ENSG00000159248.4	-	protein_coding	KNOWN	GJD2	1	2	0.547074
chr15	34755084	34812923	34784003	ENSG00000250007.6	+	antisense	KNOWN	RP11-814P5.1	2	3	0.274499
chr15	34788096	34796139	34792117	ENSG00000159251.6	-	protein_coding	KNOWN	ACTC1	3	7	0.214313
chr15	34849137	34850395	34849766	ENSG00000259751.1	-	processed_pseudogene	KNOWN	RP11-83J16.3	1	1	0.332945
chr15	34851782	34969839	34910810	ENSG00000021776.10	-	protein_coding	KNOWN	AQR	6	35	0.090509
chr15	34943080	34943394	34943237	ENSG00000231409.3	+	processed_pseudogene	KNOWN	RP11-83J16.1	1	1	-0.266269
chr15	34978341	34988287	34983314	ENSG00000198146.4	-	protein_coding	KNOWN	ZNF770	2	3	0.106789
chr15	34978351	34980084	34979217	ENSG00000279364.1	+	TEC	KNOWN	RP11-463I20.1	1	1	0.106789
chr15	34993646	35003221	34998433	ENSG00000259181.1	+	lincRNA	KNOWN	RP11-463I20.3	1	2	0.142618
chr15	34999902	35000270	35000086	ENSG00000280396.1	+	TEC	KNOWN	RP11-463I20.4	1	1	0.142618
chr15	35008469	35011191	35009830	ENSG00000259587.2	+	lincRNA	KNOWN	RP11-463I20.2	1	2	0.073916
chr15	35081144	35081513	35081328	ENSG00000259665.1	+	processed_pseudogene	KNOWN	RP11-323I15.3	1	1	0.265640
chr15	35084193	35085110	35084651	ENSG00000255192.5	-	protein_coding	KNOWN	NANOGP8	2	2	0.265640
chr15	35092481	35093210	35092845	ENSG00000259397.3	+	processed_pseudogene	KNOWN	RP11-323I15.2	1	1	0.452809
chr15	35097680	35097814	35097747	ENSG00000281647.1	-	miRNA	NOVEL	AC021231.1	1	1	0.452809
chr15	35099022	35169698	35134360	ENSG00000259336.1	-	lincRNA	KNOWN	RP11-323I15.5	1	2	-0.102340
chr15	35121573	35122084	35121828	ENSG00000259592.1	-	processed_pseudogene	KNOWN	PRELID1P4	1	1	-0.317399
chr15	35181799	35238197	35209998	ENSG00000259516.2	+	transcribed_processed_pseudogene	KNOWN	ANP32AP1	2	2	-0.163192
chr15	35217345	35546193	35381769	ENSG00000134146.11	-	protein_coding	KNOWN	DPH6	9	9	-0.165839
chr15	35282596	35282980	35282788	ENSG00000259710.1	+	processed_pseudogene	KNOWN	NUTF2P6	1	1	0.285872
chr15	35298249	35299440	35298844	ENSG00000259585.2	-	processed_pseudogene	KNOWN	RBM17P4	1	1	0.217523
chr15	35372256	35372364	35372310	ENSG00000265102.1	-	miRNA	KNOWN	MIR3942	1	1	0.091992
chr15	35396221	35396444	35396332	ENSG00000259688.1	+	processed_pseudogene	KNOWN	RP11-139F4.2	1	1	-0.263489
chr15	35400691	35401768	35401229	ENSG00000259411.1	+	processed_pseudogene	KNOWN	HNRNPA1P45	1	1	-0.263489
chr15	35546195	35859001	35702598	ENSG00000248079.2	+	lincRNA	KNOWN	DPH6-AS1	3	3	-0.145461
chr15	35774801	35774950	35774875	ENSG00000259217.2	+	unprocessed_pseudogene	KNOWN	RP11-702M1.2	1	1	-0.128850
chr15	35926843	35926953	35926898	ENSG00000265098.2	+	miRNA	NOVEL	AC100828.1	1	1	-0.391758
chr15	35939167	36252257	36095712	ENSG00000259639.5	-	lincRNA	KNOWN	RP11-184D12.1	2	5	-0.255636
chr15	36046082	36049529	36047805	ENSG00000259245.1	+	lincRNA	KNOWN	RP11-684B21.1	1	2	-0.120417
chr15	36341739	36344166	36342952	ENSG00000259395.1	+	lincRNA	KNOWN	RP11-475A13.2	1	1	0.185706
chr15	36438972	36471016	36454994	ENSG00000259737.6	-	lincRNA	KNOWN	RP11-475A13.1	3	4	0.026792
chr15	36571985	36572212	36572098	ENSG00000270500.1	+	processed_pseudogene	KNOWN	COX6CP4	1	1	0.100120
chr15	36579611	36810248	36694929	ENSG00000186073.11	+	protein_coding	KNOWN	C15orf41	15	12	-0.084456
chr15	36613474	36614198	36613836	ENSG00000261635.2	+	processed_pseudogene	KNOWN	RP11-618N24.1	1	1	0.305771
chr15	36617089	36619265	36618177	ENSG00000261315.2	+	transcribed_processed_pseudogene	KNOWN	LARP4P	1	1	0.305771
chr15	36626674	36627775	36627224	ENSG00000260582.1	-	processed_pseudogene	KNOWN	TPST2P1	1	1	0.305771
chr15	36641186	36669097	36655141	ENSG00000261191.1	-	antisense	KNOWN	RP11-16L14.2	1	3	-0.297150
chr15	36798596	36818459	36808527	ENSG00000223518.5	-	transcribed_processed_pseudogene	KNOWN	CSNK1A1P1	3	4	0.083380
chr15	36852640	36852859	36852749	ENSG00000212511.2	+	snoRNA	NOVEL	U3	1	1	-0.053439
chr15	36876379	36887035	36881707	ENSG00000259280.1	-	processed_transcript	KNOWN	RP11-122D10.1	3	4	-0.122133
chr15	36889204	37101299	36995251	ENSG00000134138.19	-	protein_coding	KNOWN	MEIS2	27	13	0.018849
chr15	36972821	36972901	36972861	ENSG00000277202.1	-	miRNA	KNOWN	MIR8063	1	1	0.165992
chr15	37050828	37050930	37050879	ENSG00000206676.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.068659
chr15	37099339	37100173	37099756	ENSG00000259460.1	+	antisense	KNOWN	RP11-128A17.1	1	2	-0.014923
chr15	37109587	37109984	37109785	ENSG00000274444.1	+	lincRNA	KNOWN	RP11-128A17.2	1	1	-0.014923
chr15	37216617	37216898	37216757	ENSG00000274216.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.187468
chr15	37253879	37254952	37254415	ENSG00000270304.1	+	processed_pseudogene	KNOWN	RP11-597G23.1	1	1	-0.488552
chr15	37365027	37490808	37427917	ENSG00000259434.1	-	lincRNA	KNOWN	RP11-720L8.1	1	4	-0.393704
chr15	37490691	37491103	37490897	ENSG00000243122.1	+	processed_pseudogene	KNOWN	RP11-25H11.1	1	1	-0.366373
chr15	37921939	37967724	37944831	ENSG00000166069.13	+	protein_coding	KNOWN	TMCO5A	8	12	-0.110910
chr15	37984766	38062340	38023553	ENSG00000259225.6	+	lincRNA	KNOWN	RP11-1008C21.1	4	4	0.109163
chr15	38069481	38072959	38071220	ENSG00000236914.3	-	lincRNA	KNOWN	RP11-1008C21.2	4	2	0.093388
chr15	38139595	38226887	38183241	ENSG00000259380.5	-	lincRNA	KNOWN	RP11-346D14.1	2	4	-0.049283
chr15	38252326	38357249	38304787	ENSG00000166068.12	+	protein_coding	KNOWN	SPRED1	3	7	0.105185
chr15	38454127	38487710	38470918	ENSG00000171262.11	+	protein_coding	KNOWN	FAM98B	4	8	-0.094791
chr15	38458760	38459540	38459150	ENSG00000259192.1	-	processed_pseudogene	KNOWN	AC109631.1	1	1	0.043082
chr15	38488103	38565575	38526839	ENSG00000172575.11	-	protein_coding	KNOWN	RASGRP1	13	17	0.181781
chr15	38502853	38504981	38503917	ENSG00000259326.1	+	antisense	KNOWN	RP11-102L12.2	1	1	0.139926
chr15	38524070	38534655	38529362	ENSG00000259598.1	+	antisense	KNOWN	RP11-275I4.1	1	3	0.206470
chr15	38542243	38542343	38542293	ENSG00000281795.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.307329
chr15	38671847	38689191	38680519	ENSG00000259747.1	+	lincRNA	KNOWN	RP11-275I4.2	2	4	0.192686
chr15	38696598	38700038	38698318	ENSG00000175779.1	+	protein_coding	KNOWN	C15orf53	1	2	0.512567
chr15	38756552	38759413	38757982	ENSG00000259731.2	-	lincRNA	KNOWN	RP11-326N17.1	1	4	0.501006
chr15	38851306	38853432	38852369	ENSG00000274281.1	-	lincRNA	KNOWN	RP11-326N17.2	1	1	0.452081
chr15	38865322	39427195	39146258	ENSG00000259345.5	-	lincRNA	KNOWN	RP11-624L4.1	6	8	0.536422
chr15	39019233	39024918	39022075	ENSG00000259278.1	+	lincRNA	KNOWN	RP11-62C7.2	1	3	0.439342
chr15	39167739	39180048	39173893	ENSG00000259423.2	+	lincRNA	KNOWN	RP11-265N7.2	3	5	0.638444
chr15	39188438	39194309	39191373	ENSG00000259450.1	-	lincRNA	KNOWN	RP11-265N7.1	1	2	0.753620
chr15	39250684	39254845	39252764	ENSG00000175746.6	+	lincRNA	KNOWN	C15orf54	2	2	0.507029
chr15	39300418	39310782	39305600	ENSG00000259447.1	-	lincRNA	KNOWN	RP11-462P6.1	2	3	0.616057
chr15	39472703	39481206	39476954	ENSG00000259269.1	+	lincRNA	KNOWN	RP11-624L4.2	3	2	0.532564
chr15	39512404	39519854	39516129	ENSG00000259390.2	-	lincRNA	KNOWN	RP11-27M9.1	2	4	0.847162
chr15	39581079	39599466	39590272	ENSG00000137801.10	+	protein_coding	KNOWN	THBS1	8	22	1.314359
chr15	39586561	39587293	39586927	ENSG00000276107.1	+	sense_intronic	KNOWN	CTD-2033D15.2	1	1	0.654114
chr15	39588357	39588882	39588619	ENSG00000278621.1	-	antisense	KNOWN	CTD-2033D15.3	1	1	0.654114
chr15	39593580	39594231	39593905	ENSG00000259279.1	-	antisense	KNOWN	CTD-2033D15.1	1	2	1.936456
chr15	39600031	39782830	39691430	ENSG00000150667.6	-	protein_coding	KNOWN	FSIP1	3	12	0.665250
chr15	39770559	39801333	39785946	ENSG00000259580.1	-	processed_transcript	KNOWN	RP11-37C7.1	1	3	0.498748
chr15	39782571	39785617	39784094	ENSG00000261136.1	+	antisense	KNOWN	RP11-37C7.3	1	1	0.339919
chr15	39799023	39920892	39859957	ENSG00000166073.8	-	protein_coding	KNOWN	GPR176	5	6	0.523387
chr15	39813223	39815429	39814326	ENSG00000259432.1	-	sense_intronic	KNOWN	RP11-37C7.2	1	3	0.734440
chr15	39921042	39925880	39923461	ENSG00000246863.2	+	lincRNA	KNOWN	RP11-325N19.3	2	2	0.193022
chr15	39922782	39922886	39922834	ENSG00000200305.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.193022
chr15	39934146	40035591	39984868	ENSG00000128829.11	+	protein_coding	KNOWN	EIF2AK4	11	39	0.528649
chr15	39951375	39951708	39951541	ENSG00000259389.2	-	processed_pseudogene	KNOWN	H3F3AP1	1	1	0.514807
chr15	40035739	40039188	40037463	ENSG00000140319.10	-	protein_coding	KNOWN	SRP14	8	6	0.472940
chr15	40039311	40067290	40053300	ENSG00000248508.6	+	lincRNA	KNOWN	SRP14-AS1	3	4	0.763198
chr15	40075204	40078704	40076954	ENSG00000259584.1	-	lincRNA	KNOWN	RP11-521C20.2	1	2	0.895595
chr15	40078892	40079347	40079119	ENSG00000275636.1	+	lincRNA	KNOWN	RP11-521C20.5	1	1	0.895595
chr15	40087890	40108892	40098391	ENSG00000104081.13	-	protein_coding	KNOWN	BMF	10	5	0.979396
chr15	40088832	40089386	40089109	ENSG00000259409.1	+	antisense	KNOWN	RP11-521C20.3	1	2	0.895595
chr15	40133768	40135214	40134491	ENSG00000259239.1	-	processed_pseudogene	KNOWN	RP11-521C20.1	1	1	0.806590
chr15	40161023	40221136	40191079	ENSG00000156970.12	+	protein_coding	KNOWN	BUB1B	11	23	0.481712
chr15	40217428	40276396	40246912	ENSG00000259288.6	+	protein_coding	KNOWN	PAK6	4	11	0.577872
chr15	40226386	40227069	40226727	ENSG00000273786.1	+	sense_intronic	KNOWN	RP11-133K1.11	1	1	0.033098
chr15	40232082	40236109	40234095	ENSG00000260648.3	+	sense_intronic	KNOWN	RP11-133K1.7	1	1	0.343799
chr15	40238759	40277487	40258123	ENSG00000137843.11	+	protein_coding	KNOWN	PAK6	17	11	0.826604
chr15	40244925	40247366	40246145	ENSG00000279537.1	+	TEC	KNOWN	RP11-133K1.8	1	1	0.343799
chr15	40250664	40252969	40251816	ENSG00000176753.5	-	processed_transcript	KNOWN	C15orf56	2	2	0.939162
chr15	40258501	40260370	40259435	ENSG00000279409.1	+	TEC	KNOWN	RP11-133K1.9	1	1	0.939162
chr15	40278176	40307935	40293055	ENSG00000137841.11	-	protein_coding	KNOWN	PLCB2	15	32	1.220224
chr15	40281444	40282586	40282015	ENSG00000230778.1	-	protein_coding	KNOWN	ANKRD63	1	1	1.250690
chr15	40285468	40285909	40285688	ENSG00000273855.1	-	sense_intronic	KNOWN	RP11-133K1.12	1	1	1.250690
chr15	40300670	40301820	40301245	ENSG00000259307.1	+	antisense	KNOWN	PLCB2-AS1	1	2	1.200141
chr15	40312352	40313289	40312820	ENSG00000244705.1	-	processed_pseudogene	KNOWN	RP11-133K1.1	1	1	0.831840
chr15	40312615	40316634	40314624	ENSG00000259198.1	+	lincRNA	KNOWN	RP11-133K1.6	1	1	0.831840
chr15	40325216	40326715	40325965	ENSG00000259330.1	+	antisense	KNOWN	INAFM2	1	2	0.831840
chr15	40331452	40340967	40336209	ENSG00000188549.12	-	protein_coding	KNOWN	C15orf52	7	11	1.068145
chr15	40331537	40331648	40331592	ENSG00000252714.1	-	rRNA	KNOWN	RNA5SP392	1	1	1.068145
chr15	40351033	40356434	40353733	ENSG00000233041.8	+	protein_coding	KNOWN	PHGR1	2	4	1.031280
chr15	40358235	40378639	40368437	ENSG00000140323.5	+	protein_coding	KNOWN	DISP2	4	8	1.064218
chr15	40368925	40369640	40369282	ENSG00000259368.1	-	antisense	KNOWN	RP11-64K12.4	1	2	1.031280
chr15	40382721	40394246	40388483	ENSG00000128944.13	+	protein_coding	KNOWN	KNSTRN	16	10	0.990253
chr15	40405795	40435947	40420871	ENSG00000128928.8	+	protein_coding	KNOWN	IVD	13	12	0.791342
chr15	40439721	40468242	40453981	ENSG00000140320.11	+	protein_coding	KNOWN	BAHD1	4	7	0.948005
chr15	40453444	40454639	40454041	ENSG00000259364.1	-	antisense	KNOWN	RP11-64K12.9	1	3	0.956904
chr15	40464193	40466726	40465459	ENSG00000259211.1	-	antisense	KNOWN	RP11-64K12.8	1	3	0.956904
chr15	40470998	40474571	40472784	ENSG00000169105.7	+	protein_coding	KNOWN	CHST14	2	2	0.600603
chr15	40480752	40481315	40481033	ENSG00000244251.1	-	processed_pseudogene	KNOWN	RP11-64K12.1	1	1	0.600603
chr15	40488041	40558019	40523030	ENSG00000259536.5	+	antisense	KNOWN	RP11-111A22.1	2	4	0.654434
chr15	40528683	40565057	40546870	ENSG00000128891.15	-	protein_coding	KNOWN	C15orf57	15	5	0.661650
chr15	40529570	40529673	40529621	ENSG00000223313.1	+	snRNA	KNOWN	RNU6-516P	1	1	0.509043
chr15	40569300	40574943	40572121	ENSG00000166133.17	+	protein_coding	KNOWN	RPUSD2	3	3	0.542862
chr15	40585454	40585751	40585602	ENSG00000203573.4	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.577419
chr15	40594020	40664342	40629181	ENSG00000137812.19	+	protein_coding	KNOWN	CASC5	13	27	0.483245
chr15	40601754	40602005	40601879	ENSG00000280903.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.496382
chr15	40615665	40615928	40615796	ENSG00000265814.2	-	misc_RNA	KNOWN	RN7SL376P	1	1	0.637592
chr15	40642933	40646857	40644895	ENSG00000259254.1	+	sense_intronic	KNOWN	CTD-2339L15.3	1	2	0.410353
chr15	40683694	40684068	40683881	ENSG00000279084.1	-	protein_coding	KNOWN	AC022405.1	1	1	0.276732
chr15	40686724	40695107	40690915	ENSG00000245849.6	-	processed_transcript	KNOWN	RAD51-AS1	3	3	0.393740
chr15	40694774	40732339	40713556	ENSG00000051180.16	+	protein_coding	KNOWN	RAD51	10	10	0.538587
chr15	40735884	40755851	40745867	ENSG00000137824.15	-	protein_coding	KNOWN	RMDN3	11	14	0.555336
chr15	40760597	40760874	40760735	ENSG00000271236.1	+	processed_pseudogene	KNOWN	SUMO2P15	1	1	0.717143
chr15	40764020	40767710	40765865	ENSG00000137880.5	+	protein_coding	KNOWN	GCHFR	6	3	0.717143
chr15	40765155	40807478	40786316	ENSG00000104129.9	-	protein_coding	KNOWN	DNAJC17	12	12	0.898995
chr15	40770080	40772449	40771264	ENSG00000188277.9	+	protein_coding	KNOWN	C15orf62	1	1	1.083430
chr15	40807086	40815084	40811085	ENSG00000166140.17	+	protein_coding	KNOWN	ZFYVE19	16	12	0.765064
chr15	40810282	40810373	40810327	ENSG00000276198.1	-	miRNA	NOVEL	AC012476.1	1	1	0.780365
chr15	40815445	40828709	40822077	ENSG00000166143.9	-	protein_coding	KNOWN	PPP1R14D	2	5	0.780365
chr15	40835808	40844387	40840097	ENSG00000261183.5	-	antisense	KNOWN	RP11-532F12.5	5	4	0.723124
chr15	40844018	40858207	40851112	ENSG00000166145.14	+	protein_coding	KNOWN	SPINT1	11	11	0.781513
chr15	40872214	40874289	40873251	ENSG00000104140.6	-	protein_coding	KNOWN	RHOV	1	3	1.091992
chr15	40874433	40874595	40874514	ENSG00000274798.1	+	lincRNA	KNOWN	CTD-2129N1.1	1	1	1.091992
chr15	40875313	40875410	40875361	ENSG00000264256.1	+	miRNA	NOVEL	AC025166.1	1	1	1.091992
chr15	40894430	40903975	40899202	ENSG00000104142.10	+	protein_coding	KNOWN	VPS18	3	5	0.753576
chr15	40906811	40910337	40908574	ENSG00000251161.3	+	lincRNA	KNOWN	RP11-540O11.1	1	2	0.762201
chr15	40929340	40939072	40934206	ENSG00000128917.6	+	protein_coding	KNOWN	DLL4	3	11	0.837081
chr15	40948736	40948869	40948802	ENSG00000259405.1	-	processed_pseudogene	KNOWN	ISCA1P4	1	1	0.836611
chr15	40952962	40956519	40954740	ENSG00000128965.11	+	protein_coding	KNOWN	CHAC1	5	4	1.018435
chr15	40978880	41116354	41047617	ENSG00000128908.15	-	protein_coding	KNOWN	INO80	11	37	0.551863
chr15	40999274	41004865	41002069	ENSG00000259617.1	+	antisense	KNOWN	RP11-540O11.6	1	2	0.618278
chr15	41011597	41013300	41012448	ENSG00000259463.1	+	antisense	KNOWN	RP11-540O11.7	1	2	0.507029
chr15	41016807	41027893	41022350	ENSG00000259521.1	+	antisense	KNOWN	RP11-540O11.4	2	4	0.507029
chr15	41016990	41018843	41017916	ENSG00000280036.1	-	sense_intronic	KNOWN	RP11-540O11.8	1	1	0.507029
chr15	41108878	41109178	41109028	ENSG00000259547.1	+	processed_pseudogene	KNOWN	CYCSP2	1	1	0.630412
chr15	41163162	41164374	41163768	ENSG00000157021.9	+	unprocessed_pseudogene	KNOWN	FAM92A1P1	1	2	0.573398
chr15	41182725	41230743	41206734	ENSG00000178997.11	-	protein_coding	KNOWN	EXD1	5	12	0.416461
chr15	41191965	41192265	41192115	ENSG00000240847.3	-	misc_RNA	KNOWN	RN7SL497P	1	1	0.297852
chr15	41230839	41281890	41256364	ENSG00000187446.11	+	protein_coding	KNOWN	CHP1	9	8	0.555253
chr15	41283990	41309737	41296863	ENSG00000247556.6	+	processed_transcript	KNOWN	OIP5-AS1	10	5	0.701039
chr15	41309268	41332621	41320944	ENSG00000104147.8	-	protein_coding	KNOWN	OIP5	2	5	0.626253
chr15	41332694	41381050	41356872	ENSG00000137804.12	+	protein_coding	KNOWN	NUSAP1	13	11	0.548834
chr15	41343080	41344225	41343652	ENSG00000259396.1	+	sense_intronic	KNOWN	RP11-16O9.2	1	2	0.603638
chr15	41387349	41402519	41394934	ENSG00000137806.8	-	protein_coding	KNOWN	NDUFAF1	4	6	0.627324
chr15	41408408	41483563	41445985	ENSG00000137815.14	+	protein_coding	KNOWN	RTF1	7	18	0.676958
chr15	41448742	41448844	41448793	ENSG00000200407.1	-	snRNA	KNOWN	RNU6-1169P	1	1	0.750955
chr15	41493393	41503551	41498472	ENSG00000137825.10	+	protein_coding	KNOWN	ITPKA	4	7	0.949120
chr15	41503638	41513887	41508762	ENSG00000062524.15	-	protein_coding	KNOWN	LTK	6	20	0.865330
chr15	41517176	41544269	41530722	ENSG00000103932.11	-	protein_coding	KNOWN	RPAP1	12	25	0.732249
chr15	41557027	41557435	41557231	ENSG00000259838.1	+	unprocessed_pseudogene	KNOWN	TCEB1P2	1	2	0.844682
chr15	41557675	41583586	41570630	ENSG00000092445.11	+	protein_coding	KNOWN	TYRO3	9	19	1.000413
chr15	41609466	41612727	41611096	ENSG00000260926.2	-	lincRNA	KNOWN	RP11-380D11.2	2	3	0.516085
chr15	41621224	41773081	41697152	ENSG00000174197.16	+	protein_coding	KNOWN	MGA	12	24	0.447260
chr15	41691585	41691678	41691631	ENSG00000207766.1	+	miRNA	KNOWN	MIR626	1	1	0.216798
chr15	41718370	41718672	41718521	ENSG00000270702.1	-	processed_pseudogene	KNOWN	RP11-107F6.4	1	1	0.297852
chr15	41770756	41772732	41771744	ENSG00000260814.2	-	lincRNA	KNOWN	RP11-107F6.3	2	2	0.775358
chr15	41774434	41827855	41801144	ENSG00000137802.13	+	protein_coding	KNOWN	MAPKBP1	17	32	0.774734
chr15	41781148	41784031	41782589	ENSG00000279937.1	-	protein_coding	KNOWN	AC073657.1	1	2	0.775358
chr15	41825099	41827936	41826517	ENSG00000250379.1	-	antisense	KNOWN	RP11-23P13.4	2	3	0.880488
chr15	41828085	41837581	41832833	ENSG00000243789.10	+	protein_coding	KNOWN	JMJD7	6	8	1.062834
chr15	41828095	41848155	41838125	ENSG00000168970.21	+	protein_coding	KNOWN	JMJD7-PLA2G4B	7	25	1.087189
chr15	41837775	41848147	41842961	ENSG00000243708.9	+	protein_coding	KNOWN	PLA2G4B	5	21	1.108866
chr15	41848144	41894077	41871110	ENSG00000137877.9	-	protein_coding	KNOWN	SPTBN5	2	68	1.160482
chr15	41851913	41852029	41851971	ENSG00000200293.1	-	rRNA	KNOWN	RNA5SP393	1	1	1.312991
chr15	41866495	41866551	41866523	ENSG00000264850.1	-	miRNA	KNOWN	MIR4310	1	1	1.312991
chr15	41892793	41898575	41895684	ENSG00000174171.5	+	antisense	KNOWN	RP11-23P13.6	4	4	1.045381
chr15	41895939	41972578	41934258	ENSG00000103966.9	-	protein_coding	KNOWN	EHD4	3	8	0.908363
chr15	41908204	41908714	41908459	ENSG00000278493.1	-	sense_intronic	KNOWN	CTD-2382E5.6	1	1	1.045381
chr15	41921417	41928883	41925150	ENSG00000259883.1	+	antisense	KNOWN	EHD4-AS1	1	4	1.018435
chr15	41972763	41999094	41985928	ENSG00000246740.2	+	antisense	KNOWN	PLA2G4E-AS1	1	4	0.485916
chr15	41981582	42051190	42016386	ENSG00000188089.13	-	protein_coding	KNOWN	PLA2G4E	3	20	0.576313
chr15	42006132	42010117	42008124	ENSG00000257797.1	+	antisense	KNOWN	CTD-2382E5.2	1	3	0.728745
chr15	42067009	42094554	42080781	ENSG00000159337.6	-	protein_coding	KNOWN	PLA2G4D	3	20	0.739035
chr15	42139034	42156636	42147835	ENSG00000168907.13	-	protein_coding	KNOWN	PLA2G4F	7	20	0.574470
chr15	42158701	42208316	42183508	ENSG00000166887.15	-	protein_coding	KNOWN	VPS39	14	26	0.586852
chr15	42199570	42199666	42199618	ENSG00000207712.1	-	miRNA	KNOWN	MIR627	1	1	0.412212
chr15	42208413	42226990	42217701	ENSG00000261002.5	+	antisense	KNOWN	RP11-546B15.1	2	5	0.160355
chr15	42210452	42273663	42242057	ENSG00000103978.15	-	protein_coding	KNOWN	TMEM87A	13	20	0.192985
chr15	42273233	42356935	42315084	ENSG00000214013.9	+	protein_coding	KNOWN	GANC	13	24	0.377164
chr15	42313687	42314386	42314036	ENSG00000260571.1	+	processed_pseudogene	KNOWN	BNIP3P5	1	2	0.254097
chr15	42348103	42412317	42380210	ENSG00000258461.5	+	processed_transcript	KNOWN	RP11-164J13.1	4	28	0.531015
chr15	42359500	42412318	42385909	ENSG00000092529.22	+	protein_coding	KNOWN	CAPN3	20	24	0.573638
chr15	42412823	42491123	42451973	ENSG00000103994.16	-	protein_coding	KNOWN	ZNF106	12	20	0.373510
chr15	42427591	42427697	42427644	ENSG00000201077.1	-	snRNA	KNOWN	RNU6-188P	1	1	0.607349
chr15	42491233	42545356	42518294	ENSG00000092531.9	+	protein_coding	KNOWN	SNAP23	23	8	0.552151
chr15	42531867	42532840	42532353	ENSG00000261684.1	-	antisense	KNOWN	RP11-265N6.1	1	2	0.427595
chr15	42537820	42548802	42543311	ENSG00000180979.9	-	protein_coding	KNOWN	LRRC57	6	6	0.427595
chr15	42548810	42569994	42559402	ENSG00000137814.9	+	protein_coding	KNOWN	HAUS2	10	7	0.502571
chr15	42567031	42569994	42568512	ENSG00000261822.1	-	antisense	KNOWN	RP11-265N6.2	2	2	0.507029
chr15	42571927	42572433	42572180	ENSG00000260490.2	+	processed_pseudogene	KNOWN	MYL12BP1	1	1	0.834717
chr15	42575659	42720981	42648320	ENSG00000159433.11	+	protein_coding	KNOWN	STARD9	7	33	0.418933
chr15	42581156	42581488	42581322	ENSG00000260282.1	-	processed_pseudogene	KNOWN	EIF4EBP2P2	1	1	0.834717
chr15	42723559	42737126	42730342	ENSG00000140326.12	-	protein_coding	KNOWN	CDAN1	5	28	0.581530
chr15	42724102	42724922	42724512	ENSG00000278769.1	+	antisense	KNOWN	CTD-2036P10.5	1	1	0.445629
chr15	42726583	42727211	42726897	ENSG00000274403.1	+	antisense	KNOWN	CTD-2036P10.6	1	1	0.445629
chr15	42738734	42920809	42829771	ENSG00000128881.16	-	protein_coding	KNOWN	TTBK2	8	18	0.342189
chr15	42739118	42743202	42741160	ENSG00000246283.2	+	lincRNA	KNOWN	CTD-2036P10.3	2	3	0.704331
chr15	42800968	42802405	42801686	ENSG00000260799.1	-	processed_pseudogene	KNOWN	KRT8P50	1	1	0.230228
chr15	42939310	42940358	42939834	ENSG00000254793.1	-	processed_pseudogene	KNOWN	FDPSP4	1	1	0.387448
chr15	42942897	43106113	43024505	ENSG00000159459.11	-	protein_coding	KNOWN	UBR1	12	47	0.285409
chr15	43008838	43008922	43008880	ENSG00000273690.1	+	miRNA	NOVEL	AC090514.1	1	1	0.345748
chr15	43106225	43221283	43163754	ENSG00000166947.11	-	protein_coding	KNOWN	EPB42	10	13	0.321151
chr15	43109928	43110018	43109973	ENSG00000281269.1	+	pseudogene	NOVEL	AC068724.2	1	2	0.273598
chr15	43115702	43116493	43116097	ENSG00000205871.5	-	processed_pseudogene	KNOWN	RPS3AP47	1	1	0.589898
chr15	43123279	43185146	43154212	ENSG00000137842.6	+	protein_coding	KNOWN	TMEM62	15	14	0.239351
chr15	43131008	43131686	43131347	ENSG00000260928.2	+	processed_pseudogene	KNOWN	SPCS2P1	1	1	0.328528
chr15	43134212	43134284	43134248	ENSG00000281124.1	-	miRNA	NOVEL	AC068724.1	1	1	0.328528
chr15	43184079	43185141	43184610	ENSG00000261687.1	-	antisense	KNOWN	RP11-473C18.3	1	2	0.217523
chr15	43185118	43197176	43191147	ENSG00000166946.13	+	protein_coding	KNOWN	CCNDBP1	15	12	0.287119
chr15	43232595	43266857	43249726	ENSG00000104055.14	-	protein_coding	KNOWN	TGM5	7	13	0.563246
chr15	43247680	43247781	43247730	ENSG00000202211.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.642603
chr15	43267904	43268388	43268146	ENSG00000261679.2	-	processed_pseudogene	KNOWN	ATP5HP1	1	1	0.481319
chr15	43276280	43302255	43289267	ENSG00000159495.7	-	protein_coding	KNOWN	TGM7	2	13	0.464762
chr15	43302096	43302772	43302434	ENSG00000260406.1	+	antisense	KNOWN	RP11-402F9.3	1	2	0.415462
chr15	43323649	43330605	43327127	ENSG00000168806.7	-	protein_coding	KNOWN	LCMT2	2	2	0.078159
chr15	43330674	43354555	43342614	ENSG00000168803.14	+	protein_coding	KNOWN	ADAL	8	12	0.437714
chr15	43358172	43371025	43364598	ENSG00000140265.12	-	protein_coding	KNOWN	ZSCAN29	8	6	0.170111
chr15	43369221	43409771	43389496	ENSG00000137822.12	+	protein_coding	KNOWN	TUBGCP4	12	18	0.573912
chr15	43391384	43391727	43391555	ENSG00000243871.3	-	misc_RNA	KNOWN	RN7SL487P	1	1	0.585032
chr15	43403061	43510728	43456894	ENSG00000067369.13	-	protein_coding	KNOWN	TP53BP1	17	28	0.446596
chr15	43510958	43531620	43521289	ENSG00000166963.12	+	protein_coding	KNOWN	MAP1A	2	7	0.947779
chr15	43519409	43519489	43519449	ENSG00000275702.1	+	miRNA	NOVEL	AC019011.1	1	1	0.961205
chr15	43533462	43590253	43561857	ENSG00000168781.21	-	protein_coding	KNOWN	PPIP5K1	23	31	0.528658
chr15	43593054	43604901	43598977	ENSG00000237289.9	+	protein_coding	KNOWN	CKMT1B	15	10	0.689489
chr15	43599398	43618800	43609099	ENSG00000242866.9	-	protein_coding	KNOWN	STRC	13	29	0.653697
chr15	43602543	43602648	43602595	ENSG00000222398.1	+	snRNA	KNOWN	RNU6-554P	1	1	0.689489
chr15	43628503	43668118	43648310	ENSG00000166762.16	-	protein_coding	KNOWN	CATSPER2	12	14	0.376653
chr15	43637632	43637738	43637685	ENSG00000206991.1	-	snRNA	KNOWN	RNU6-610P	1	1	0.415568
chr15	43642389	43643023	43642706	ENSG00000275601.1	-	sense_intronic	KNOWN	AC011330.13	1	1	0.415568
chr15	43649123	43649280	43649201	ENSG00000224677.1	+	unprocessed_pseudogene	KNOWN	PDIA3P2	1	1	0.415568
chr15	43663654	43684339	43673996	ENSG00000249839.1	-	unprocessed_pseudogene	KNOWN	AC011330.5	1	26	0.507318
chr15	43692886	43699222	43696054	ENSG00000223572.9	+	protein_coding	KNOWN	CKMT1A	8	10	0.564844
chr15	43699488	43718184	43708836	ENSG00000166763.7	-	unprocessed_pseudogene	KNOWN	STRCP1	1	29	0.599453
chr15	43702363	43702470	43702416	ENSG00000201136.1	+	snRNA	KNOWN	RNU6-353P	1	1	0.564844
chr15	43726918	43747094	43737006	ENSG00000205771.6	-	transcribed_unprocessed_pseudogene	KNOWN	CATSPER2P1	5	12	0.234769
chr15	43734179	43734285	43734232	ENSG00000206589.1	-	snRNA	KNOWN	RNU6-354P	1	1	0.161033
chr15	43746392	43773279	43759835	ENSG00000167004.12	+	protein_coding	KNOWN	PDIA3	6	14	0.369253
chr15	43772600	43777543	43775071	ENSG00000128886.11	-	protein_coding	KNOWN	ELL3	8	11	0.537131
chr15	43772617	43799133	43785875	ENSG00000262560.1	-	protein_coding	KNOWN	RP11-296A16.1	1	17	0.583344
chr15	43777087	43802589	43789838	ENSG00000140264.19	+	protein_coding	KNOWN	SERF2	17	7	0.603362
chr15	43782843	43783033	43782938	ENSG00000279808.1	-	protein_coding	KNOWN	AC018512.1	1	2	0.537131
chr15	43793659	43793759	43793709	ENSG00000221792.1	-	miRNA	KNOWN	MIR1282	1	1	0.671286
chr15	43794162	43800221	43797191	ENSG00000184716.13	-	protein_coding	KNOWN	SERINC4	6	12	0.671286
chr15	43796142	43803043	43799592	ENSG00000242028.5	+	protein_coding	KNOWN	HYPK	6	6	0.671286
chr15	43804492	43824802	43814647	ENSG00000140259.6	-	protein_coding	KNOWN	MFAP1	2	9	0.759584
chr15	43826963	43868419	43847691	ENSG00000092470.11	+	protein_coding	KNOWN	WDR76	4	13	0.356671
chr15	43863893	43864005	43863949	ENSG00000200391.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.366499
chr15	43870761	44195252	44033006	ENSG00000171877.19	-	protein_coding	KNOWN	FRMD5	11	16	0.170334
chr15	43875849	43876244	43876046	ENSG00000227973.1	-	processed_pseudogene	KNOWN	PIN4P1	1	1	0.543788
chr15	43989061	43990184	43989622	ENSG00000185607.5	-	processed_pseudogene	KNOWN	ACTBP7	1	1	0.181370
chr15	44063511	44064313	44063912	ENSG00000224055.1	+	processed_pseudogene	KNOWN	GAPDHP55	1	1	0.091992
chr15	44288729	44415758	44352243	ENSG00000166734.18	+	protein_coding	KNOWN	CASC4	11	10	0.262293
chr15	44354691	44355692	44355191	ENSG00000250130.1	+	processed_pseudogene	KNOWN	RP11-616K22.1	1	1	0.315767
chr15	44387320	44390451	44388885	ENSG00000259499.1	-	lincRNA	KNOWN	RP11-616K22.2	1	2	0.259703
chr15	44402685	44427144	44414914	ENSG00000259595.1	-	antisense	KNOWN	RP11-516C1.1	1	5	0.396453
chr15	44427234	44529038	44478136	ENSG00000137770.13	+	protein_coding	KNOWN	CTDSPL2	11	13	0.230438
chr15	44447577	44449344	44448460	ENSG00000259335.1	-	processed_pseudogene	KNOWN	HNRNPMP1	1	1	0.541439
chr15	44516650	44517483	44517066	ENSG00000259563.1	-	antisense	KNOWN	CTD-2329K10.1	1	2	0.152113
chr15	44527257	44536923	44532090	ENSG00000179523.4	-	lincRNA	KNOWN	EIF3J-AS1	5	3	0.441900
chr15	44537057	44563029	44550043	ENSG00000104131.12	+	protein_coding	KNOWN	EIF3J	7	8	0.508150
chr15	44557829	44559188	44558508	ENSG00000259659.1	+	sense_intronic	KNOWN	RP11-151N17.1	1	2	0.459967
chr15	44562696	44663678	44613187	ENSG00000104133.14	-	protein_coding	KNOWN	SPG11	25	40	0.130865
chr15	44665732	44711316	44688524	ENSG00000229474.6	-	protein_coding	KNOWN	PATL2	9	16	0.035072
chr15	44697333	44697430	44697381	ENSG00000206957.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.145337
chr15	44711477	44718877	44715177	ENSG00000166710.17	+	protein_coding	KNOWN	B2M	14	5	0.114593
chr15	44728988	44767829	44748408	ENSG00000185880.12	+	protein_coding	KNOWN	TRIM69	12	8	-0.082757
chr15	44778196	44778721	44778458	ENSG00000276121.1	-	lincRNA	KNOWN	CTD-2008A1.3	1	1	-0.166320
chr15	44825747	44884694	44855220	ENSG00000259479.6	-	transcribed_unprocessed_pseudogene	KNOWN	SORD2P	4	10	0.034746
chr15	44826540	44827094	44826817	ENSG00000259187.1	+	lincRNA	KNOWN	CTD-2008A1.1	1	2	-0.046288
chr15	44843612	44843724	44843668	ENSG00000238845.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.148575
chr15	44884616	44884780	44884698	ENSG00000212424.1	+	snRNA	KNOWN	RNU1-119P	1	1	0.143391
chr15	44914802	44930622	44922712	ENSG00000259742.1	-	unprocessed_pseudogene	KNOWN	CTD-2014N11.1	1	5	-0.343744
chr15	44919376	44920820	44920098	ENSG00000259231.2	+	processed_pseudogene	KNOWN	CTD-2014N11.2	1	2	-0.342809
chr15	44927600	44927703	44927651	ENSG00000252117.1	-	snRNA	KNOWN	RNU6-1108P	1	1	-0.342809
chr15	44956702	44979229	44967965	ENSG00000167014.10	+	protein_coding	KNOWN	C15orf43	3	7	-0.175325
chr15	44962830	44962933	44962881	ENSG00000252475.1	+	snRNA	KNOWN	RNU6-1332P	1	1	-0.082613
chr15	44970035	44971178	44970606	ENSG00000259304.1	-	processed_pseudogene	KNOWN	CTD-2014N11.3	1	1	-0.308888
chr15	44973558	44973661	44973609	ENSG00000252288.1	+	snRNA	KNOWN	RNU6-966P	1	1	-0.308888
chr15	45002864	45003028	45002946	ENSG00000212550.1	-	snRNA	KNOWN	RNU1-78P	1	1	-0.366547
chr15	45023104	45077185	45050144	ENSG00000140263.13	+	protein_coding	KNOWN	SORD	7	9	0.097102
chr15	45041716	45058707	45050211	ENSG00000259418.1	-	antisense	KNOWN	RP11-109D20.1	1	4	0.109843
chr15	45047103	45047215	45047159	ENSG00000252171.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.067009
chr15	45073492	45074048	45073770	ENSG00000259352.1	-	antisense	KNOWN	RP11-109D20.2	1	2	0.379973
chr15	45092650	45114344	45103497	ENSG00000140279.12	-	protein_coding	KNOWN	DUOX2	5	34	0.424688
chr15	45114321	45118421	45116371	ENSG00000140274.13	+	protein_coding	KNOWN	DUOXA2	3	6	0.793080
chr15	45117367	45129938	45123652	ENSG00000140254.12	-	protein_coding	KNOWN	DUOXA1	16	11	0.793080
chr15	45129933	45165576	45147754	ENSG00000137857.17	+	protein_coding	KNOWN	DUOX1	12	35	0.529528
chr15	45152664	45167526	45160095	ENSG00000259539.1	-	3prime_overlapping_ncrna	KNOWN	CTD-2651B20.1	1	2	0.536602
chr15	45167214	45201175	45184194	ENSG00000138606.19	-	protein_coding	KNOWN	SHF	11	8	0.566745
chr15	45170344	45199958	45185151	ENSG00000259519.1	+	antisense	KNOWN	RP11-519G16.2	1	2	0.566921
chr15	45198517	45199139	45198828	ENSG00000259932.1	-	sense_intronic	KNOWN	CTD-2651B20.7	1	1	0.642189
chr15	45200325	45200632	45200478	ENSG00000260035.1	-	sense_intronic	KNOWN	CTD-2651B20.6	1	1	0.642189
chr15	45214448	45215044	45214746	ENSG00000279014.1	-	TEC	KNOWN	CTD-2651B20.8	1	1	-0.008037
chr15	45214906	45215033	45214969	ENSG00000261709.3	-	snoRNA	NOVEL	SNORA11	1	1	-0.008037
chr15	45215547	45215943	45215745	ENSG00000259338.1	+	processed_pseudogene	KNOWN	CTD-2651B20.2	1	1	-0.008037
chr15	45251580	45279251	45265415	ENSG00000259520.5	-	antisense	KNOWN	CTD-2651B20.3	3	4	-0.093616
chr15	45252230	45277845	45265037	ENSG00000137860.11	+	protein_coding	KNOWN	SLC28A2	4	18	-0.105897
chr15	45321077	45321692	45321384	ENSG00000235390.4	-	processed_pseudogene	KNOWN	CTD-2651B20.5	1	1	0.049179
chr15	45330209	45332634	45331421	ENSG00000259433.2	-	processed_pseudogene	KNOWN	CTD-2651B20.4	1	1	-0.345886
chr15	45354779	45354885	45354832	ENSG00000238941.1	-	snRNA	KNOWN	RNU6-953P	1	1	-0.305885
chr15	45361124	45402327	45381725	ENSG00000171766.15	-	protein_coding	KNOWN	GATM	13	9	-0.308882
chr15	45378700	45380123	45379411	ENSG00000275672.1	+	antisense	KNOWN	GATM-AS1	1	1	-0.348050
chr15	45402331	45421419	45411875	ENSG00000171763.17	+	protein_coding	KNOWN	SPATA5L1	7	8	-0.192390
chr15	45430529	45448761	45439645	ENSG00000166920.10	+	protein_coding	KNOWN	C15orf48	4	5	0.074610
chr15	45430652	45441808	45436230	ENSG00000259342.1	-	antisense	KNOWN	RP11-519G16.5	1	3	0.074610
chr15	45433050	45433129	45433089	ENSG00000211519.1	+	miRNA	KNOWN	MIR147B	1	1	0.074610
chr15	45448427	45513767	45481097	ENSG00000259354.5	+	antisense	KNOWN	RP11-519G16.3	5	5	0.114397
chr15	45479611	45522807	45501209	ENSG00000104154.6	-	protein_coding	KNOWN	SLC30A4	2	8	-0.021358
chr15	45511136	45586290	45548713	ENSG00000179362.14	+	transcribed_processed_pseudogene	KNOWN	HMGN2P46	8	6	0.144016
chr15	45537250	45537377	45537313	ENSG00000207516.1	+	snoRNA	NOVEL	SNORA41	1	1	0.270137
chr15	45558598	45562877	45560737	ENSG00000259681.1	+	lincRNA	KNOWN	RP11-96O20.2	1	2	0.169160
chr15	45566776	45567074	45566925	ENSG00000259427.2	+	transcribed_processed_pseudogene	KNOWN	DPPA5P2	1	1	0.169160
chr15	45585757	45586304	45586030	ENSG00000275709.1	-	lincRNA	KNOWN	RP11-96O20.5	1	1	0.008576
chr15	45587123	45615999	45601561	ENSG00000104164.10	+	protein_coding	KNOWN	BLOC1S6	20	6	0.007554
chr15	45587351	45676314	45631832	ENSG00000260170.1	+	protein_coding	KNOWN	RP11-96O20.4	1	6	0.029477
chr15	45591984	45592085	45592034	ENSG00000200419.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.003995
chr15	45631148	45691294	45661221	ENSG00000137767.13	+	protein_coding	KNOWN	SQRDL	8	11	0.036403
chr15	45702640	45703183	45702911	ENSG00000273972.1	+	lincRNA	KNOWN	CTD-2306A12.1	1	1	0.297852
chr15	45705078	45931069	45818073	ENSG00000259200.1	+	lincRNA	KNOWN	RP11-718O11.1	2	5	-0.174072
chr15	46099193	46100392	46099792	ENSG00000259743.2	-	processed_pseudogene	KNOWN	RP11-315O8.1	1	2	-0.329305
chr15	46341354	46341599	46341476	ENSG00000259593.1	+	processed_pseudogene	KNOWN	RP11-640I2.1	1	1	-0.183115
chr15	46351662	46351746	46351704	ENSG00000238819.1	-	snoRNA	NOVEL	SNORD11	1	1	-0.294287
chr15	46660658	46660760	46660709	ENSG00000238456.1	+	snRNA	KNOWN	RNU6-1014P	1	1	-0.450158
chr15	46693288	46804844	46749066	ENSG00000259255.1	+	lincRNA	KNOWN	RP11-627D16.1	1	2	-0.528438
chr15	46720193	46720512	46720352	ENSG00000223308.1	-	misc_RNA	KNOWN	RN7SKP101	1	1	-0.472622
chr15	46827526	46827958	46827742	ENSG00000259509.2	+	processed_pseudogene	KNOWN	RP11-627D16.2	1	1	-0.506146
chr15	46957533	46957617	46957575	ENSG00000252500.1	-	miRNA	NOVEL	AC087433.1	1	1	-0.367440
chr15	47133652	47134026	47133839	ENSG00000259752.2	-	protein_coding	KNOWN	AC066615.1	1	1	-0.439729
chr15	47184101	47774223	47479162	ENSG00000137872.15	+	protein_coding	KNOWN	SEMA6D	18	20	-0.186233
chr15	47242204	47242279	47242241	ENSG00000222311.1	+	miRNA	NOVEL	AC084882.1	1	1	-0.345588
chr15	47272597	47272889	47272743	ENSG00000222343.1	+	misc_RNA	KNOWN	RN7SKP139	1	1	-0.044643
chr15	47274183	47275164	47274673	ENSG00000259554.1	+	sense_intronic	KNOWN	RP11-408J6.1	1	2	-0.044643
chr15	47359430	47396732	47378081	ENSG00000259221.5	-	antisense	KNOWN	CTD-2050N2.1	3	5	0.031089
chr15	47397501	47399554	47398527	ENSG00000259360.1	-	antisense	KNOWN	RP11-142J21.1	1	2	-0.066156
chr15	47525169	47527756	47526462	ENSG00000259740.1	+	sense_intronic	KNOWN	RP11-142J21.2	1	2	-0.106422
chr15	47603880	47606352	47605116	ENSG00000259588.1	-	antisense	KNOWN	RP11-552E10.1	1	3	-0.024926
chr15	47730144	47730935	47730539	ENSG00000213862.4	-	processed_pseudogene	KNOWN	CTD-2270N23.1	1	1	-0.347051
chr15	47803384	47846236	47824810	ENSG00000259572.5	-	lincRNA	KNOWN	LINC01491	3	5	-0.233114
chr15	47884310	48049112	47966711	ENSG00000259754.1	+	lincRNA	KNOWN	RP11-208K4.1	1	3	-0.290970
chr15	47944044	47949509	47946776	ENSG00000259730.1	+	lincRNA	KNOWN	CTD-2007H18.1	1	2	-0.314825
chr15	48120972	48142672	48131822	ENSG00000188467.10	+	protein_coding	KNOWN	SLC24A5	4	9	-0.392431
chr15	48134631	48178517	48156574	ENSG00000104177.17	-	protein_coding	KNOWN	MYEF2	17	17	-0.518377
chr15	48161805	48161903	48161854	ENSG00000266143.1	+	miRNA	NOVEL	AC066612.1	1	1	-0.548758
chr15	48189037	48191691	48190364	ENSG00000259235.1	-	lincRNA	KNOWN	RP11-605F22.2	3	4	-0.580909
chr15	48191539	48203756	48197647	ENSG00000233932.4	+	protein_coding	KNOWN	CTXN2	1	2	-0.562512
chr15	48191664	48304078	48247871	ENSG00000074803.17	+	protein_coding	KNOWN	SLC12A1	11	27	-0.442563
chr15	48192191	48201684	48196937	ENSG00000259385.1	-	antisense	KNOWN	RP11-605F22.1	1	2	-0.562512
chr15	48312353	48331856	48322104	ENSG00000259488.2	-	antisense	KNOWN	RP11-154J22.1	3	3	-0.324068
chr15	48325558	48325671	48325614	ENSG00000202542.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.383849
chr15	48331011	48343373	48337192	ENSG00000128951.13	+	protein_coding	KNOWN	DUT	11	7	0.243995
chr15	48408306	48645849	48527077	ENSG00000166147.13	-	protein_coding	KNOWN	FBN1	8	66	0.149632
chr15	48528980	48529728	48529354	ENSG00000274654.1	-	sense_intronic	KNOWN	CTD-3247H4.2	1	1	-0.022080
chr15	48645951	48652016	48648983	ENSG00000259705.1	+	lincRNA	KNOWN	RP11-227D13.1	1	2	0.198630
chr15	48662531	48663056	48662793	ENSG00000273925.1	-	lincRNA	KNOWN	RP11-227D13.5	1	1	0.328226
chr15	48712928	48811146	48762037	ENSG00000103995.13	-	protein_coding	KNOWN	CEP152	10	27	-0.007368
chr15	48725338	48725827	48725582	ENSG00000259216.2	+	processed_pseudogene	KNOWN	RP11-227D13.2	1	1	0.054517
chr15	48729080	48729844	48729462	ENSG00000259469.1	-	lincRNA	KNOWN	RP11-227D13.4	1	2	0.054517
chr15	48783190	48784121	48783655	ENSG00000259670.1	+	antisense	KNOWN	RP11-485O10.2	1	2	-0.187531
chr15	48810701	48811909	48811305	ENSG00000259700.3	+	processed_transcript	KNOWN	RP11-485O10.3	2	2	-0.253144
chr15	48823735	48963444	48893589	ENSG00000185634.11	-	protein_coding	KNOWN	SHC4	6	12	0.155029
chr15	48877886	48880183	48879034	ENSG00000255302.3	+	protein_coding	KNOWN	EID1	3	2	0.174454
chr15	48938236	48948031	48943133	ENSG00000259602.1	+	antisense	KNOWN	RP11-138E16.1	1	4	0.595054
chr15	48971803	48973361	48972582	ENSG00000259500.1	+	processed_pseudogene	KNOWN	KRT8P24	1	1	0.500688
chr15	48972595	48972727	48972661	ENSG00000280771.1	-	miRNA	NOVEL	AC091073.1	1	1	0.500688
chr15	48988476	49046563	49017519	ENSG00000138593.8	-	protein_coding	KNOWN	SECISBP2L	11	18	0.188212
chr15	48995912	48996022	48995967	ENSG00000207105.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.143391
chr15	49042341	49042643	49042492	ENSG00000265942.2	-	misc_RNA	KNOWN	RN7SL577P	1	1	0.154923
chr15	49101791	49103264	49102527	ENSG00000259656.1	+	lincRNA	KNOWN	RP11-325E5.1	1	2	0.067330
chr15	49106068	49155661	49130864	ENSG00000166200.14	-	protein_coding	KNOWN	COPS2	8	13	-0.070511
chr15	49137762	49137863	49137812	ENSG00000200120.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.205502
chr15	49155656	49367869	49261762	ENSG00000156958.14	+	protein_coding	KNOWN	GALK2	22	12	-0.029129
chr15	49156329	49156847	49156588	ENSG00000259467.1	+	processed_pseudogene	KNOWN	NDUFAF4P1	1	1	-0.203085
chr15	49169070	49169153	49169111	ENSG00000264210.1	-	miRNA	KNOWN	MIR4716	1	1	-0.203085
chr15	49177610	49178741	49178175	ENSG00000259545.2	-	processed_pseudogene	KNOWN	RP11-325E5.4	1	2	-0.127789
chr15	49198900	49199194	49199047	ENSG00000243338.3	-	misc_RNA	KNOWN	RN7SL307P	1	1	-0.217336
chr15	49326962	49620931	49473946	ENSG00000166262.15	-	protein_coding	KNOWN	FAM227B	14	16	-0.149077
chr15	49343608	49344254	49343931	ENSG00000275580.1	+	lincRNA	KNOWN	RP11-295H24.4	1	1	-0.006923
chr15	49353485	49354034	49353759	ENSG00000276593.1	+	sense_intronic	KNOWN	RP11-295H24.5	1	1	0.083327
chr15	49365124	49366685	49365904	ENSG00000259531.2	-	processed_pseudogene	KNOWN	RP11-295H24.3	1	1	0.083327
chr15	49423096	49488775	49455935	ENSG00000140285.9	+	protein_coding	KNOWN	FGF7	6	4	-0.266553
chr15	49620980	49656232	49638606	ENSG00000104047.14	+	protein_coding	KNOWN	DTWD1	11	6	-0.092992
chr15	49794246	49796097	49795171	ENSG00000259388.1	+	processed_pseudogene	KNOWN	CTD-2647E9.1	1	1	-0.060960
chr15	49858238	50182817	50020527	ENSG00000104043.14	-	protein_coding	KNOWN	ATP8B4	18	29	-0.037146
chr15	49879604	49883525	49881564	ENSG00000259188.5	+	antisense	KNOWN	CTD-2647E9.3	2	3	-0.231705
chr15	49982443	49982561	49982502	ENSG00000201086.1	+	rRNA	KNOWN	RNA5SP394	1	1	-0.148271
chr15	50182196	50236395	50209295	ENSG00000140284.10	+	protein_coding	KNOWN	SLC27A2	4	11	0.160058
chr15	50221888	50221996	50221942	ENSG00000200605.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.058825
chr15	50241947	50266026	50253986	ENSG00000140287.10	-	protein_coding	KNOWN	HDC	7	12	0.247128
chr15	50244628	50244931	50244779	ENSG00000241175.3	-	misc_RNA	KNOWN	RN7SL494P	1	1	0.283523
chr15	50275392	50355408	50315400	ENSG00000104064.16	-	protein_coding	KNOWN	GABPB1	12	9	-0.016805
chr15	50347423	50347529	50347476	ENSG00000271819.1	-	snRNA	KNOWN	RNU6-94P	1	1	0.101330
chr15	50354959	50372202	50363580	ENSG00000244879.4	+	antisense	KNOWN	GABPB1-AS1	6	2	0.248823
chr15	50359450	50360194	50359822	ENSG00000259715.1	-	lincRNA	KNOWN	CTD-3110H11.1	1	2	0.283473
chr15	50360329	50360410	50360369	ENSG00000264109.1	+	miRNA	KNOWN	MIR4712	1	1	0.283473
chr15	50417385	50418692	50418038	ENSG00000259465.2	+	processed_pseudogene	KNOWN	AHCYP7	1	1	0.249821
chr15	50424380	50514419	50469399	ENSG00000138592.13	+	protein_coding	KNOWN	USP8	19	20	0.138254
chr15	50463381	50463498	50463439	ENSG00000252376.1	+	rRNA	KNOWN	RNA5SP395	1	1	0.215981
chr15	50466738	50467096	50466917	ENSG00000242737.1	+	processed_pseudogene	KNOWN	RP11-562A8.1	1	1	0.215981
chr15	50494018	50497080	50495549	ENSG00000259618.1	-	lincRNA	KNOWN	RP11-562A8.5	1	2	-0.137795
chr15	50497195	50498744	50497969	ENSG00000259298.1	-	antisense	KNOWN	RP11-562A8.4	1	3	-0.137795
chr15	50500562	50546708	50523635	ENSG00000170236.14	-	protein_coding	KNOWN	USP50	5	8	0.052880
chr15	50552473	50686815	50619644	ENSG00000092439.13	-	protein_coding	KNOWN	TRPM7	9	39	0.052499
chr15	50557601	50560500	50559050	ENSG00000259684.1	+	antisense	KNOWN	RP11-120K9.2	1	3	0.210433
chr15	50688900	50689193	50689046	ENSG00000243027.3	+	misc_RNA	KNOWN	RN7SL354P	1	1	0.032182
chr15	50702266	50765808	50734037	ENSG00000138600.9	-	protein_coding	KNOWN	SPPL2A	7	15	0.331004
chr15	50742702	50743276	50742989	ENSG00000279665.1	-	TEC	KNOWN	RP11-507J18.5	1	1	0.198907
chr15	50746709	50749829	50748269	ENSG00000259773.1	+	antisense	KNOWN	RP11-507J18.2	1	2	0.198907
chr15	50798670	50798951	50798810	ENSG00000241130.1	+	processed_pseudogene	KNOWN	RP11-507J18.1	1	1	0.335106
chr15	50839875	50908599	50874237	ENSG00000273674.4	-	lincRNA	KNOWN	CTD-2378E12.1	3	5	0.024078
chr15	50908672	51005900	50957286	ENSG00000081014.10	+	protein_coding	KNOWN	AP4E1	7	21	-0.025270
chr15	50944663	50945996	50945329	ENSG00000259378.1	+	processed_pseudogene	KNOWN	DCAF13P3	1	1	-0.042758
chr15	51037488	51293912	51165700	ENSG00000259240.1	+	lincRNA	KNOWN	RP11-108K3.1	1	3	0.030167
chr15	51056598	51105276	51080937	ENSG00000183578.5	-	protein_coding	KNOWN	TNFAIP8L3	1	3	0.108067
chr15	51064609	51069586	51067097	ENSG00000259204.1	-	sense_intronic	KNOWN	RP11-394B5.2	1	2	-0.033539
chr15	51208057	51338610	51273333	ENSG00000137869.13	-	protein_coding	KNOWN	CYP19A1	21	11	0.036072
chr15	51242190	51242264	51242227	ENSG00000266593.1	+	miRNA	KNOWN	MIR4713	1	1	-0.151737
chr15	51278927	51280015	51279471	ENSG00000259701.1	-	sense_intronic	KNOWN	RP11-108K3.3	1	2	-0.032815
chr15	51314034	51314109	51314071	ENSG00000278098.1	+	miRNA	KNOWN	MIR7973-2	1	1	0.316623
chr15	51315841	51321996	51318918	ENSG00000259306.2	+	lincRNA	KNOWN	RP11-108K3.2	1	3	0.316623
chr15	51341629	51408013	51374821	ENSG00000186417.13	+	protein_coding	KNOWN	GLDN	10	10	-0.061059
chr15	51351100	51351192	51351146	ENSG00000270378.1	-	processed_pseudogene	KNOWN	RP11-108K3.5	1	1	-0.154923
chr15	51367377	51369110	51368243	ENSG00000259194.1	+	sense_intronic	KNOWN	RP11-108K3.4	1	2	-0.154923
chr15	51414097	51498833	51456465	ENSG00000259678.1	+	antisense	KNOWN	RP11-707P17.1	1	6	-0.313506
chr15	51447711	51622833	51535272	ENSG00000104093.13	-	protein_coding	KNOWN	DMXL2	14	43	-0.316415
chr15	51457286	51460582	51458934	ENSG00000259668.5	+	antisense	KNOWN	RP11-707P17.2	3	3	-0.228228
chr15	51681353	51721031	51701192	ENSG00000104112.8	+	protein_coding	KNOWN	SCG3	3	12	-0.262028
chr15	51693216	51695765	51694490	ENSG00000259241.1	-	lincRNA	KNOWN	RP11-313P18.2	1	2	-0.387176
chr15	51707995	51715220	51711607	ENSG00000259296.1	-	antisense	KNOWN	RP11-313P18.1	1	3	-0.188721
chr15	51723011	51751585	51737298	ENSG00000140280.13	-	protein_coding	KNOWN	LYSMD2	4	3	0.083192
chr15	51751561	51816368	51783964	ENSG00000128872.9	+	protein_coding	KNOWN	TMOD2	6	11	0.016650
chr15	51752485	51756475	51754480	ENSG00000259377.1	+	sense_intronic	KNOWN	CTD-2308G16.1	1	2	0.091992
chr15	51829628	51947295	51888461	ENSG00000138594.12	+	protein_coding	KNOWN	TMOD3	12	12	0.214850
chr15	51833134	51833426	51833280	ENSG00000274954.1	+	sense_intronic	KNOWN	RP11-56B16.6	1	1	-0.235894
chr15	51858070	51858352	51858211	ENSG00000277677.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.083771
chr15	51859185	51861293	51860239	ENSG00000259632.2	-	processed_pseudogene	KNOWN	RP11-56B16.1	1	2	0.083771
chr15	51884556	51884653	51884604	ENSG00000207484.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.346989
chr15	51887560	51901123	51894341	ENSG00000259201.1	-	antisense	KNOWN	RP11-56B16.5	1	4	0.305729
chr15	51907200	51907305	51907252	ENSG00000272337.1	+	snRNA	KNOWN	RNU6-90P	1	1	0.296682
chr15	51908902	51909642	51909272	ENSG00000259185.1	-	antisense	KNOWN	RP11-56B16.4	1	2	0.296682
chr15	51919073	51930627	51924850	ENSG00000259556.2	-	unprocessed_pseudogene	KNOWN	RP11-56B16.2	1	9	0.489807
chr15	51938025	51971806	51954915	ENSG00000166477.12	-	protein_coding	KNOWN	LEO1	3	12	0.135252
chr15	51952106	52067372	52009739	ENSG00000069956.11	+	protein_coding	KNOWN	MAPK6	8	6	0.151834
chr15	52010999	52019095	52015047	ENSG00000259438.1	-	lincRNA	KNOWN	CTD-2650P22.1	1	2	0.142873
chr15	52017167	52018032	52017599	ENSG00000274528.1	-	sense_intronic	KNOWN	CTD-2650P22.2	1	1	0.142873
chr15	52033707	52035625	52034666	ENSG00000259398.1	+	sense_intronic	KNOWN	RP11-430B1.1	1	2	0.050651
chr15	52056675	52100523	52078599	ENSG00000259712.1	-	antisense	KNOWN	CTD-2184D3.5	1	2	0.193805
chr15	52082302	52086574	52084438	ENSG00000259178.1	+	lincRNA	KNOWN	CTD-2184D3.3	1	3	0.345485
chr15	52095295	52095747	52095521	ENSG00000242327.1	+	processed_pseudogene	KNOWN	CTD-2184D3.1	1	1	0.227969
chr15	52109263	52112775	52111019	ENSG00000137875.4	-	protein_coding	KNOWN	BCL2L10	2	2	0.332591
chr15	52115105	52191369	52153237	ENSG00000069966.18	-	protein_coding	KNOWN	GNB5	12	13	0.309425
chr15	52116574	52122131	52119352	ENSG00000259327.1	+	lincRNA	KNOWN	CTD-2184D3.6	1	2	0.360330
chr15	52124561	52140246	52132403	ENSG00000259709.1	+	antisense	KNOWN	CTD-2184D3.7	2	4	0.401673
chr15	52162751	52162852	52162801	ENSG00000206995.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.420046
chr15	52180093	52205874	52192983	ENSG00000259577.1	+	lincRNA	KNOWN	RP11-430B1.2	2	3	0.166561
chr15	52192322	52295798	52244060	ENSG00000128833.12	-	protein_coding	KNOWN	MYO5C	9	41	0.113498
chr15	52277095	52277207	52277151	ENSG00000221052.2	-	miRNA	KNOWN	MIR1266	1	1	-0.090212
chr15	52307283	52529050	52418166	ENSG00000197535.14	-	protein_coding	KNOWN	MYO5A	13	42	0.009758
chr15	52430064	52430768	52430416	ENSG00000280817.1	+	protein_coding	KNOWN	AC018902.1	1	3	0.074181
chr15	52505191	52505862	52505526	ENSG00000231169.4	+	processed_pseudogene	KNOWN	EEF1B2P1	1	1	0.050172
chr15	52547045	52569883	52558464	ENSG00000128989.10	-	protein_coding	KNOWN	ARPP19	13	6	-0.073341
chr15	52577842	52598709	52588275	ENSG00000260618.1	+	antisense	KNOWN	RP11-23N2.4	2	4	0.159856
chr15	52581317	52709817	52645567	ENSG00000047346.12	-	protein_coding	KNOWN	FAM214A	16	13	-0.099765
chr15	52648634	52649866	52649250	ENSG00000259935.1	-	sense_intronic	KNOWN	RP11-519C12.1	1	2	-0.105948
chr15	52756989	52791078	52774033	ENSG00000169856.8	-	protein_coding	KNOWN	ONECUT1	4	5	-0.046102
chr15	52801614	52804942	52803278	ENSG00000259203.1	-	lincRNA	KNOWN	RP11-209K10.2	1	3	0.310632
chr15	52885595	52886470	52886032	ENSG00000214896.4	+	processed_pseudogene	KNOWN	RPSAP55	1	1	-0.164784
chr15	52937139	52938518	52937828	ENSG00000259612.1	-	processed_pseudogene	KNOWN	EEF1A1P22	1	1	-0.485666
chr15	53116365	53129698	53123031	ENSG00000259237.1	+	lincRNA	KNOWN	RP11-209E8.1	1	3	-0.542923
chr15	53431960	53432027	53431993	ENSG00000278568.1	+	miRNA	NOVEL	AC066614.1	1	1	-0.489556
chr15	53513741	53762878	53638309	ENSG00000166415.14	-	protein_coding	KNOWN	WDR72	8	20	-0.513697
chr15	53651977	53652123	53652050	ENSG00000252066.1	+	snRNA	KNOWN	RNU2-53P	1	1	-0.900629
chr15	53764204	53764310	53764257	ENSG00000206641.1	+	snRNA	KNOWN	RNU6-449P	1	1	-0.541581
chr15	53837271	53837560	53837415	ENSG00000259301.2	-	processed_pseudogene	KNOWN	RP11-643A5.1	1	1	-0.572405
chr15	53910769	53914712	53912740	ENSG00000280362.1	+	TEC	KNOWN	RP11-643A5.3	1	1	-0.727436
chr15	53947624	53976908	53962266	ENSG00000259669.5	-	lincRNA	KNOWN	RP11-643A5.2	3	6	-0.643170
chr15	54012904	54633414	54323159	ENSG00000137766.16	+	protein_coding	KNOWN	UNC13C	5	32	-0.555733
chr15	54048588	54050876	54049732	ENSG00000259619.2	-	processed_pseudogene	KNOWN	RP11-390M11.1	1	1	-0.447028
chr15	54320731	54321565	54321148	ENSG00000259550.2	-	processed_pseudogene	KNOWN	HNRNPA1P74	1	1	-0.588128
chr15	55056747	55092173	55074460	ENSG00000260937.5	+	lincRNA	KNOWN	RP11-548M13.1	2	2	-0.602654
chr15	55171972	55178175	55175073	ENSG00000279145.1	-	TEC	KNOWN	RP11-547D13.1	1	2	-0.108827
chr15	55180806	55197067	55188936	ENSG00000137876.9	-	protein_coding	KNOWN	RSL24D1	6	6	-0.105274
chr15	55202966	55319113	55261039	ENSG00000069974.15	-	protein_coding	KNOWN	RAB27A	12	8	-0.047931
chr15	55288849	55289346	55289097	ENSG00000276533.1	-	sense_intronic	KNOWN	RP11-139H15.5	1	1	0.044163
chr15	55317184	55319161	55318172	ENSG00000225973.3	-	protein_coding	KNOWN	PIGBOS1	3	2	0.152428
chr15	55318960	55355648	55337304	ENSG00000069943.9	+	protein_coding	KNOWN	PIGB	12	12	0.024985
chr15	55340032	55408510	55374271	ENSG00000260916.5	-	protein_coding	KNOWN	CCPG1	13	10	-0.064588
chr15	55343141	55343575	55343358	ENSG00000274765.1	-	sense_intronic	KNOWN	RP11-139H15.7	1	1	0.038125
chr15	55346347	55346752	55346549	ENSG00000277548.1	-	sense_intronic	KNOWN	RP11-139H15.6	1	1	0.038125
chr15	55355248	55498360	55426804	ENSG00000261771.5	-	processed_transcript	KNOWN	DYX1C1-CCPG1	2	16	-0.074337
chr15	55372921	55373032	55372976	ENSG00000207964.2	-	miRNA	KNOWN	MIR628	1	1	0.265323
chr15	55408548	55418764	55413656	ENSG00000261652.2	+	protein_coding	KNOWN	C15orf65	2	2	-0.207185
chr15	55410525	55508234	55459379	ENSG00000256061.7	-	protein_coding	KNOWN	DYX1C1	7	10	-0.064375
chr15	55442635	55443357	55442996	ENSG00000260036.1	-	processed_pseudogene	KNOWN	RP11-178D12.2	1	1	-0.028302
chr15	55538890	55588947	55563918	ENSG00000171016.11	-	protein_coding	KNOWN	PYGO1	2	3	-0.339766
chr15	55611546	55743090	55677318	ENSG00000166450.12	-	protein_coding	KNOWN	PRTG	6	20	-0.448555
chr15	55680385	55681463	55680924	ENSG00000259180.1	+	antisense	KNOWN	RP11-420M1.2	1	2	-0.637742
chr15	55746639	55746767	55746703	ENSG00000259369.1	+	processed_pseudogene	KNOWN	RP11-291H24.1	1	1	-0.187468
chr15	55826922	55993746	55910334	ENSG00000069869.15	-	protein_coding	KNOWN	NEDD4	12	29	-0.069199
chr15	56005715	56007176	56006445	ENSG00000230183.4	-	processed_pseudogene	KNOWN	CNOT6LP1	1	1	0.213298
chr15	56029684	56029981	56029832	ENSG00000239703.3	-	misc_RNA	KNOWN	RN7SL568P	1	1	0.028216
chr15	56071421	56071639	56071530	ENSG00000261333.2	+	processed_pseudogene	KNOWN	CD24P2	1	1	-0.140893
chr15	56087280	56243266	56165273	ENSG00000181827.14	-	protein_coding	KNOWN	RFX7	3	9	-0.111367
chr15	56192353	56193262	56192807	ENSG00000261072.2	-	processed_pseudogene	KNOWN	RP11-5N19.3	1	1	-0.112990
chr15	56244009	56445997	56345003	ENSG00000151575.14	+	protein_coding	KNOWN	TEX9	9	13	-0.340731
chr15	56248787	56249127	56248957	ENSG00000275417.1	+	sense_intronic	KNOWN	RP11-844G16.3	1	1	-0.298242
chr15	56274530	56274636	56274583	ENSG00000199784.1	-	snRNA	KNOWN	RNU6-1287P	1	1	-0.162429
chr15	56323193	56323719	56323456	ENSG00000261174.2	+	processed_pseudogene	KNOWN	RP11-844G16.1	1	1	-0.062894
chr15	56394321	56396785	56395553	ENSG00000259941.1	-	lincRNA	KNOWN	RP11-48G14.2	1	1	-0.284572
chr15	56408483	56410186	56409334	ENSG00000261823.1	-	lincRNA	KNOWN	RP11-48G14.1	1	2	-0.325947
chr15	56421544	56465137	56443340	ENSG00000138587.5	-	protein_coding	KNOWN	MNS1	3	10	-0.485740
chr15	56447120	56447697	56447408	ENSG00000277245.1	+	antisense	KNOWN	RP11-48G14.3	1	1	-0.439621
chr15	56542952	56629592	56586272	ENSG00000260392.5	-	sense_overlapping	KNOWN	RP11-1129I3.1	2	10	-0.365785
chr15	56630181	56918571	56774376	ENSG00000137871.19	-	protein_coding	KNOWN	ZNF280D	17	24	-0.250091
chr15	56634038	56634167	56634102	ENSG00000276696.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.576802
chr15	56729932	56730611	56730271	ENSG00000274667.1	-	sense_intronic	KNOWN	RP11-31H5.3	1	1	-0.036883
chr15	56795382	56795522	56795452	ENSG00000279683.1	+	TEC	KNOWN	RP11-31H5.2	1	1	0.083059
chr15	56846340	56846605	56846472	ENSG00000225625.4	+	processed_pseudogene	KNOWN	RP11-31H5.1	1	1	0.100981
chr15	56887107	56888219	56887663	ENSG00000276524.1	+	lincRNA	KNOWN	RP11-323F24.3	1	2	-0.441227
chr15	56908312	56908635	56908473	ENSG00000275343.1	-	sense_intronic	KNOWN	RP11-323F24.4	1	1	0.020290
chr15	56918623	57299281	57108952	ENSG00000140262.17	+	protein_coding	KNOWN	TCF12	28	21	-0.138397
chr15	56966325	56966397	56966361	ENSG00000222586.1	-	miRNA	NOVEL	AC010999.1	1	1	-0.149016
chr15	57246960	57247893	57247426	ENSG00000260689.2	-	processed_pseudogene	KNOWN	HNRNPA3P11	1	1	-0.319822
chr15	57278570	57278673	57278621	ENSG00000239035.1	-	snoRNA	NOVEL	snoU13	1	1	-0.008702
chr15	57300365	57307769	57304067	ENSG00000247982.6	+	lincRNA	KNOWN	LINC00926	4	3	-0.072128
chr15	57319138	57323908	57321523	ENSG00000260172.1	+	lincRNA	KNOWN	LINC01413	1	4	0.326856
chr15	57325472	57326447	57325959	ENSG00000260870.1	-	processed_pseudogene	KNOWN	RP11-358M11.4	1	2	0.326856
chr15	57375967	57550727	57463347	ENSG00000128849.10	+	protein_coding	KNOWN	CGNL1	3	19	0.058819
chr15	57405074	57405175	57405124	ENSG00000252984.1	-	snRNA	KNOWN	RNU6-844P	1	1	-0.235439
chr15	57477484	57478329	57477906	ENSG00000261489.1	-	lincRNA	KNOWN	CTD-2515H24.3	1	2	0.128891
chr15	57527187	57529009	57528098	ENSG00000261265.1	-	lincRNA	KNOWN	CTD-2515H24.4	1	2	0.209229
chr15	57553955	57555680	57554817	ENSG00000276772.1	+	lincRNA	KNOWN	CTD-2515H24.2	1	1	0.583468
chr15	57555951	57556379	57556165	ENSG00000240874.1	-	processed_pseudogene	KNOWN	CTD-2515H24.1	1	1	0.583468
chr15	57591908	57714745	57653326	ENSG00000137878.16	+	protein_coding	KNOWN	GCOM1	14	17	-0.165070
chr15	57591941	57685364	57638652	ENSG00000263155.5	+	protein_coding	KNOWN	MYZAP	4	13	-0.161889
chr15	57706629	57782762	57744695	ENSG00000255529.7	+	protein_coding	KNOWN	POLR2M	8	7	-0.089252
chr15	57720295	57720928	57720611	ENSG00000261219.1	+	lincRNA	KNOWN	RP11-344A16.2	1	1	-0.100653
chr15	57953424	58497866	58225645	ENSG00000128918.14	-	protein_coding	KNOWN	ALDH1A2	25	14	-0.024640
chr15	57979716	57980646	57980181	ENSG00000259477.1	-	processed_pseudogene	KNOWN	RP11-86K22.1	1	1	-0.222117
chr15	57990217	57990636	57990426	ENSG00000274719.1	-	sense_intronic	KNOWN	RP11-86K22.2	1	1	-0.269107
chr15	58065225	58071043	58068134	ENSG00000259285.1	+	antisense	KNOWN	CTD-2330J20.2	1	3	-0.523709
chr15	58138169	58185911	58162040	ENSG00000103569.9	+	protein_coding	KNOWN	AQP9	4	7	-0.357243
chr15	58150275	58150563	58150419	ENSG00000259651.2	+	processed_pseudogene	KNOWN	CTD-2330J20.1	1	1	-0.335690
chr15	58150635	58150962	58150798	ENSG00000259626.2	+	processed_pseudogene	KNOWN	MTND3P12	1	1	-0.335690
chr15	58151033	58152513	58151773	ENSG00000259600.2	+	processed_pseudogene	KNOWN	RP11-925D8.3	1	1	-0.335690
chr15	58152606	58154407	58153506	ENSG00000259379.1	+	processed_pseudogene	KNOWN	MTND5P32	1	1	-0.335690
chr15	58154960	58156061	58155510	ENSG00000259671.1	+	processed_pseudogene	KNOWN	MTCYBP23	1	1	-0.335690
chr15	58200606	58201018	58200812	ENSG00000240934.2	+	processed_pseudogene	KNOWN	RP11-925D8.1	1	1	0.145103
chr15	58410569	58569843	58490206	ENSG00000166035.10	+	protein_coding	KNOWN	LIPC	7	11	0.370779
chr15	58434890	58498735	58466812	ENSG00000259293.1	-	antisense	KNOWN	RP11-355N15.1	1	3	0.406813
chr15	58454327	58454982	58454654	ENSG00000277229.1	+	sense_intronic	KNOWN	RP11-355N15.3	1	1	0.402332
chr15	58456188	58456348	58456268	ENSG00000277790.1	+	sense_intronic	KNOWN	RP11-355N15.2	1	1	0.402332
chr15	58521311	58523371	58522341	ENSG00000259476.1	+	sense_intronic	KNOWN	RP11-50C13.2	1	2	0.223236
chr15	58587507	58591676	58589591	ENSG00000259250.1	+	antisense	KNOWN	RP11-50C13.1	1	2	0.075139
chr15	58588807	58749978	58669392	ENSG00000137845.14	-	protein_coding	KNOWN	ADAM10	17	16	0.011224
chr15	58672296	58672933	58672614	ENSG00000270986.1	+	processed_pseudogene	KNOWN	RP11-123C21.2	1	1	-0.214111
chr15	58686411	58686617	58686514	ENSG00000182625.3	+	processed_pseudogene	KNOWN	RP11-123C21.1	1	1	-0.214111
chr15	58691106	58693125	58692115	ENSG00000282100.1	-	processed_pseudogene	KNOWN	HSP90AB4P	1	2	0.040766
chr15	58703852	58704154	58704003	ENSG00000199730.1	-	misc_RNA	KNOWN	RN7SKP95	1	1	0.040766
chr15	58732188	58733149	58732668	ENSG00000278513.1	+	unprocessed_pseudogene	KNOWN	RP11-123C21.3	1	2	0.108386
chr15	58755625	58756247	58755936	ENSG00000259173.2	-	processed_pseudogene	KNOWN	RP11-30K9.7	1	2	0.403936
chr15	58760466	58760681	58760573	ENSG00000200318.2	-	snoRNA	NOVEL	U3	1	1	0.403936
chr15	58768072	58770974	58769523	ENSG00000245975.2	-	lincRNA	KNOWN	RP11-30K9.6	1	2	0.273836
chr15	58771192	58861900	58816546	ENSG00000128923.10	+	protein_coding	KNOWN	FAM63B	5	9	0.148943
chr15	58815272	58817728	58816500	ENSG00000259402.1	+	sense_intronic	KNOWN	RP11-30K9.4	1	2	0.303098
chr15	58856831	58865063	58860947	ENSG00000259353.1	-	antisense	KNOWN	RP11-30K9.5	1	2	-0.103024
chr15	58865006	58865303	58865154	ENSG00000259738.1	+	processed_pseudogene	KNOWN	ZNF444P1	1	1	-0.103024
chr15	58865175	59097419	58981297	ENSG00000157450.15	+	protein_coding	KNOWN	RNF111	12	14	0.057236
chr15	58869659	58870134	58869896	ENSG00000242747.1	+	processed_pseudogene	KNOWN	RP11-30K9.1	1	1	0.034471
chr15	58879045	58933653	58906349	ENSG00000137776.16	-	protein_coding	KNOWN	SLTM	26	21	0.119296
chr15	58889967	58894082	58892024	ENSG00000225798.1	+	antisense	KNOWN	AC025918.2	1	2	0.051503
chr15	58892507	58892590	58892548	ENSG00000278439.1	+	miRNA	NOVEL	AC025918.1	1	1	0.048923
chr15	58967046	58967808	58967427	ENSG00000259393.2	-	processed_pseudogene	KNOWN	RP11-313H3.1	1	1	0.170943
chr15	59049399	59050385	59049892	ENSG00000241640.2	-	processed_pseudogene	KNOWN	RP11-59H7.1	1	2	-0.229693
chr15	59105078	59125045	59115061	ENSG00000157456.7	+	protein_coding	KNOWN	CCNB2	5	9	-0.143398
chr15	59115547	59116089	59115818	ENSG00000277144.1	-	lincRNA	KNOWN	RP11-59H7.4	1	1	-0.182868
chr15	59121034	59133250	59127142	ENSG00000259732.1	+	sense_overlapping	KNOWN	RP11-59H7.3	1	2	-0.133977
chr15	59132434	59372900	59252667	ENSG00000157483.8	-	protein_coding	KNOWN	MYO1E	10	28	0.228132
chr15	59171183	59171262	59171222	ENSG00000253030.1	-	miRNA	KNOWN	MIR2116	1	1	0.383758
chr15	59206823	59208515	59207669	ENSG00000171989.5	+	protein_coding	KNOWN	LDHAL6B	1	1	0.296923
chr15	59212648	59212788	59212718	ENSG00000200070.1	-	snRNA	KNOWN	RNU4-80P	1	1	0.071719
chr15	59266720	59271162	59268941	ENSG00000259771.1	-	sense_intronic	KNOWN	RP11-429D19.1	1	2	-0.042272
chr15	59341314	59341417	59341365	ENSG00000199512.1	-	snRNA	KNOWN	RNU6-212P	1	1	0.282323
chr15	59348648	59359889	59354268	ENSG00000259735.1	-	sense_intronic	KNOWN	RP11-356M20.3	1	2	0.427005
chr15	59372693	59523549	59448121	ENSG00000157470.11	+	protein_coding	KNOWN	FAM81A	15	9	0.114423
chr15	59401221	59402004	59401612	ENSG00000259750.1	-	processed_pseudogene	KNOWN	RP11-356M20.2	1	1	0.329275
chr15	59406963	59408154	59407558	ENSG00000259674.1	-	processed_pseudogene	KNOWN	RP11-356M20.1	1	2	0.329275
chr15	59408905	59409015	59408960	ENSG00000200252.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.329275
chr15	59525422	59525881	59525651	ENSG00000243780.1	-	processed_pseudogene	KNOWN	RP11-112N19.1	1	1	-0.032815
chr15	59552615	59553093	59552854	ENSG00000240238.1	-	processed_pseudogene	KNOWN	RP11-112N19.2	1	1	0.397284
chr15	59574103	59574222	59574162	ENSG00000201704.1	-	rRNA	KNOWN	RNA5SP396	1	1	-0.125426
chr15	59594875	59640239	59617557	ENSG00000140297.12	+	protein_coding	KNOWN	GCNT3	10	6	-0.072169
chr15	59638062	59657541	59647801	ENSG00000140307.10	-	protein_coding	KNOWN	GTF2A2	10	6	-0.068254
chr15	59644298	59672302	59658300	ENSG00000227161.1	-	sense_overlapping	KNOWN	AC092755.4	1	2	0.023526
chr15	59659146	59689534	59674340	ENSG00000140299.11	-	protein_coding	KNOWN	BNIP2	13	10	-0.027074
chr15	59676757	59677321	59677039	ENSG00000259657.1	+	processed_pseudogene	KNOWN	PIGHP1	1	1	-0.093223
chr15	59688517	59689418	59688967	ENSG00000259238.1	+	antisense	KNOWN	RP11-361D15.2	1	2	-0.093223
chr15	59768352	59769146	59768749	ENSG00000234797.5	+	processed_pseudogene	KNOWN	RPS3AP6	1	1	-0.123737
chr15	59871511	59873495	59872503	ENSG00000259601.2	-	processed_pseudogene	KNOWN	RP11-568G20.2	1	1	-0.167652
chr15	59964942	59966084	59965513	ENSG00000259573.1	+	processed_pseudogene	KNOWN	NMNAT1P5	1	2	-0.473288
chr15	60004222	60061730	60032976	ENSG00000171956.6	+	protein_coding	KNOWN	FOXB1	3	4	-0.250130
chr15	60053204	60054092	60053648	ENSG00000259558.1	-	processed_pseudogene	KNOWN	MESTP2	1	1	-0.308546
chr15	60073554	60118320	60095937	ENSG00000259223.2	-	lincRNA	KNOWN	RP11-82L7.4	1	3	-0.201927
chr15	60347134	60402883	60375008	ENSG00000182718.16	-	protein_coding	KNOWN	ANXA2	38	14	0.584560
chr15	60390371	60390682	60390526	ENSG00000240163.1	+	processed_pseudogene	KNOWN	RP11-745A24.1	1	1	0.730893
chr15	60404463	60404960	60404711	ENSG00000242667.1	+	processed_pseudogene	KNOWN	RP11-745A24.2	1	1	0.730893
chr15	60409234	60409420	60409327	ENSG00000273721.1	-	unprocessed_pseudogene	KNOWN	RP11-745A24.3	1	1	0.730893
chr15	60419609	60479160	60449384	ENSG00000128915.11	-	protein_coding	KNOWN	ICE2	17	16	-0.051443
chr15	60479178	60630637	60554907	ENSG00000245534.6	+	antisense	KNOWN	RORA-AS1	6	6	-0.263238
chr15	60488284	61229319	60858801	ENSG00000069667.15	-	protein_coding	KNOWN	RORA	14	12	-0.107855
chr15	60529973	60545159	60537566	ENSG00000259274.1	+	antisense	KNOWN	CTD-2501E16.2	1	2	-0.264428
chr15	60558080	60558401	60558240	ENSG00000259513.1	+	transcribed_processed_pseudogene	KNOWN	CYCSP38	1	1	-0.159927
chr15	60593027	60593460	60593243	ENSG00000273958.1	+	lincRNA	KNOWN	RP11-219B17.3	1	1	-0.472961
chr15	60677109	60677272	60677190	ENSG00000277413.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.269465
chr15	60681569	60686888	60684228	ENSG00000259482.1	+	antisense	KNOWN	RORA-AS2	2	3	-0.269465
chr15	60736769	60736886	60736827	ENSG00000212625.1	+	rRNA	KNOWN	RNA5SP397	1	1	-0.100653
chr15	60763906	60765625	60764765	ENSG00000259591.1	+	antisense	KNOWN	RP11-554D20.1	2	2	0.075313
chr15	60847757	60849068	60848412	ENSG00000273792.1	-	sense_intronic	KNOWN	RP11-554D20.2	1	1	0.030263
chr15	61181249	61195938	61188593	ENSG00000259481.1	+	antisense	KNOWN	RP11-39M21.1	1	4	-0.204198
chr15	61211913	61214231	61213072	ENSG00000259575.1	+	antisense	KNOWN	RP11-39M21.2	1	2	-0.182515
chr15	61239906	61240331	61240118	ENSG00000276473.1	+	lincRNA	KNOWN	CTD-2026J24.1	1	1	0.083628
chr15	61298791	61635449	61467120	ENSG00000259616.2	-	lincRNA	KNOWN	RP11-507B12.2	1	5	-0.334882
chr15	61598514	61605241	61601877	ENSG00000259530.1	+	lincRNA	KNOWN	RP11-259A24.1	1	2	-0.229936
chr15	61639349	61715171	61677260	ENSG00000259675.1	-	lincRNA	KNOWN	RP11-507B12.1	2	2	-0.376182
chr15	61674767	61675212	61674989	ENSG00000271195.1	+	processed_pseudogene	KNOWN	RP11-162I7.2	1	1	-0.497146
chr15	61729850	61731389	61730619	ENSG00000259284.1	+	lincRNA	KNOWN	RP11-162I7.1	1	2	-0.420709
chr15	61743941	61744019	61743980	ENSG00000266349.1	+	miRNA	NOVEL	AC018618.1	1	1	-0.425543
chr15	61834752	61852152	61843452	ENSG00000259564.1	+	antisense	KNOWN	RP11-16B9.1	1	3	0.031532
chr15	61852389	62060473	61956431	ENSG00000129003.15	-	protein_coding	KNOWN	VPS13C	10	85	-0.337960
chr15	62045225	62045319	62045272	ENSG00000273653.1	-	miRNA	NOVEL	AC104590.1	1	1	-0.692840
chr15	62060503	62062434	62061468	ENSG00000259251.2	+	antisense	KNOWN	RP11-643M14.1	2	2	-0.171043
chr15	62066977	62070917	62068947	ENSG00000198535.5	+	protein_coding	KNOWN	C2CD4A	1	2	-0.097533
chr15	62082450	62083305	62082877	ENSG00000259466.1	-	processed_pseudogene	KNOWN	NPM1P47	1	1	0.144459
chr15	62163535	62165283	62164409	ENSG00000205502.3	-	protein_coding	KNOWN	C2CD4B	1	2	-0.188116
chr15	62196145	62203318	62199731	ENSG00000259697.1	-	lincRNA	KNOWN	RP11-299H22.1	1	4	-0.251963
chr15	62227896	62253235	62240565	ENSG00000166104.14	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-299H22.3	4	23	0.100184
chr15	62230384	62231895	62231139	ENSG00000259878.1	-	lincRNA	KNOWN	RP11-1O10.1	1	4	0.050651
chr15	62243366	62243448	62243407	ENSG00000221141.1	-	miRNA	NOVEL	AC126323.1	1	1	0.050651
chr15	62244330	62244595	62244462	ENSG00000276713.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.050651
chr15	62246284	62246349	62246316	ENSG00000277779.1	-	miRNA	NOVEL	AC126323.2	1	1	0.050651
chr15	62253730	62270680	62262205	ENSG00000260062.3	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P11	3	18	0.470619
chr15	62255686	62256421	62256053	ENSG00000260375.1	-	unprocessed_pseudogene	KNOWN	RP11-299H22.4	1	3	0.501006
chr15	62274163	62278365	62276264	ENSG00000261296.1	+	lincRNA	KNOWN	RP11-299H22.6	2	3	-0.255322
chr15	62284190	62285006	62284598	ENSG00000260957.1	+	lincRNA	KNOWN	RP11-299H22.7	1	2	-0.255322
chr15	62304658	62304734	62304696	ENSG00000277919.1	-	miRNA	KNOWN	MIR8067	1	1	-0.186309
chr15	62343029	62343138	62343083	ENSG00000275451.1	+	miRNA	KNOWN	MIR6085	1	1	-0.073067
chr15	62362029	62362331	62362180	ENSG00000259557.2	-	processed_pseudogene	KNOWN	HMGN1P26	1	1	0.277942
chr15	62387327	62388875	62388101	ENSG00000274340.1	-	lincRNA	KNOWN	RP11-435J9.2	1	1	-0.016785
chr15	62390526	62844631	62617578	ENSG00000171914.14	+	protein_coding	KNOWN	TLN2	11	58	0.301406
chr15	62637172	62645291	62641231	ENSG00000259458.1	-	antisense	KNOWN	MGC15885	2	3	0.317759
chr15	62682916	62690448	62686682	ENSG00000259756.1	-	antisense	KNOWN	RP11-625H11.2	1	4	0.309449
chr15	62786807	62786894	62786850	ENSG00000265317.1	+	miRNA	NOVEL	AC103740.1	1	1	0.226921
chr15	62823957	62824041	62823999	ENSG00000211137.1	+	miRNA	KNOWN	MIR190A	1	1	0.294235
chr15	62827675	62884034	62855854	ENSG00000259370.2	-	antisense	KNOWN	RP11-1069G10.1	4	4	0.572407
chr15	62895812	62899543	62897677	ENSG00000259727.1	+	lincRNA	KNOWN	RP11-1069G10.2	1	2	0.720511
chr15	62953173	62954124	62953648	ENSG00000259394.2	+	processed_pseudogene	KNOWN	RP11-244F12.1	1	1	0.553896
chr15	63042632	63071915	63057273	ENSG00000140416.19	+	protein_coding	KNOWN	TPM1	33	10	0.920297
chr15	63046034	63049387	63047710	ENSG00000259498.1	-	antisense	KNOWN	RP11-244F12.3	2	2	0.690034
chr15	63070025	63071911	63070968	ENSG00000259627.1	-	antisense	KNOWN	RP11-244F12.2	1	2	0.849065
chr15	63098870	63110403	63104636	ENSG00000259672.1	+	lincRNA	KNOWN	RP11-69G7.1	1	4	0.710245
chr15	63121800	63142061	63131930	ENSG00000103642.11	+	protein_coding	KNOWN	LACTB	4	6	0.322850
chr15	63125872	63158021	63141946	ENSG00000185088.13	-	protein_coding	KNOWN	RPS27L	8	5	0.266644
chr15	63189469	63267782	63228625	ENSG00000166128.12	+	protein_coding	KNOWN	RAB8B	5	9	0.434696
chr15	63276018	63309126	63292572	ENSG00000138613.13	+	protein_coding	KNOWN	APH1B	10	7	0.347666
chr15	63321378	63382161	63351769	ENSG00000074410.13	-	protein_coding	KNOWN	CA12	6	11	0.610522
chr15	63390136	63438320	63414228	ENSG00000259459.5	+	lincRNA	KNOWN	RP11-321G12.1	2	7	0.460470
chr15	63456294	63469351	63462822	ENSG00000259268.1	-	lincRNA	KNOWN	AC007950.1	1	3	0.610123
chr15	63500737	63503083	63501910	ENSG00000276651.1	-	lincRNA	KNOWN	AC007950.2	1	1	0.468555
chr15	63504511	63594640	63549575	ENSG00000140455.16	+	protein_coding	KNOWN	USP3	21	16	0.243967
chr15	63544247	63601589	63572918	ENSG00000259248.5	-	antisense	KNOWN	USP3-AS1	10	4	0.208881
chr15	63597353	63602428	63599890	ENSG00000197361.6	+	protein_coding	KNOWN	FBXL22	3	3	0.356298
chr15	63608618	63833942	63721280	ENSG00000103657.13	-	protein_coding	KNOWN	HERC1	15	78	0.078093
chr15	63675146	63713758	63694452	ENSG00000259589.2	+	antisense	KNOWN	RP11-317G6.1	1	4	0.130818
chr15	63870930	63871019	63870974	ENSG00000199156.1	-	miRNA	KNOWN	MIR422A	1	1	0.305860
chr15	63890030	63890317	63890173	ENSG00000275785.1	+	unprocessed_pseudogene	KNOWN	RP11-111E14.2	1	1	0.476042
chr15	63907036	64072033	63989534	ENSG00000035664.11	-	protein_coding	KNOWN	DAPK2	13	12	0.495818
chr15	63928274	63935953	63932113	ENSG00000259351.1	+	antisense	KNOWN	RP11-111E14.1	1	4	0.593189
chr15	64072559	64094018	64083288	ENSG00000166797.10	-	protein_coding	KNOWN	FAM96A	6	6	0.275434
chr15	64094123	64146090	64120106	ENSG00000028528.14	+	protein_coding	KNOWN	SNX1	14	15	0.326744
chr15	64111458	64111569	64111513	ENSG00000201071.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.198301
chr15	64151715	64157481	64154598	ENSG00000157734.13	+	protein_coding	KNOWN	SNX22	7	8	0.730592
chr15	64155812	64163205	64159508	ENSG00000166794.4	-	protein_coding	KNOWN	PPIB	3	5	0.730592
chr15	64165517	64356259	64260888	ENSG00000169118.16	-	protein_coding	KNOWN	CSNK1G1	19	14	0.263373
chr15	64181180	64381440	64281310	ENSG00000259316.8	-	protein_coding	KNOWN	CTD-2116N17.1	14	13	0.222654
chr15	64342539	64342698	64342618	ENSG00000252774.1	+	snoRNA	NOVEL	SNORA48	1	1	0.055280
chr15	64364311	64387687	64375999	ENSG00000166803.10	-	protein_coding	KNOWN	KIAA0101	9	5	0.125125
chr15	64387748	64455303	64421525	ENSG00000103671.9	+	protein_coding	KNOWN	TRIP4	12	13	0.258815
chr15	64445130	64445243	64445186	ENSG00000206781.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.291301
chr15	64460742	64686068	64573405	ENSG00000180357.9	+	protein_coding	KNOWN	ZNF609	4	9	0.287400
chr15	64470253	64471364	64470808	ENSG00000259682.1	+	sense_intronic	KNOWN	RP11-702L15.4	1	2	0.421299
chr15	64528667	64529671	64529169	ENSG00000248415.1	-	processed_pseudogene	KNOWN	GAPDHP61	1	1	0.433996
chr15	64592979	64593326	64593152	ENSG00000243403.1	+	processed_pseudogene	KNOWN	RP11-330L19.1	1	1	0.004529
chr15	64631109	64631914	64631511	ENSG00000239465.1	-	processed_pseudogene	KNOWN	RP11-330L19.2	1	2	0.213982
chr15	64652888	64652989	64652938	ENSG00000207223.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.051350
chr15	64671263	64671369	64671316	ENSG00000207162.1	+	snRNA	KNOWN	RNU6-549P	1	1	0.461515
chr15	64687573	64703281	64695427	ENSG00000180304.14	-	protein_coding	KNOWN	OAZ2	9	6	0.595567
chr15	64695041	64695594	64695317	ENSG00000265967.1	+	antisense	KNOWN	AC100830.4	1	1	0.620052
chr15	64696622	64696861	64696741	ENSG00000264937.1	+	antisense	KNOWN	AC100830.5	1	1	0.620052
chr15	64701248	64719602	64710425	ENSG00000259635.1	+	antisense	KNOWN	AC100830.3	1	2	0.552140
chr15	64739892	64775587	64757739	ENSG00000166831.8	-	protein_coding	KNOWN	RBPMS2	2	8	0.541365
chr15	64762387	64762515	64762451	ENSG00000221033.1	-	miRNA	KNOWN	MIR1272	1	1	0.529913
chr15	64815632	64825668	64820650	ENSG00000140451.12	-	protein_coding	KNOWN	PIF1	9	13	0.916312
chr15	64841883	64930920	64886401	ENSG00000249240.2	+	protein_coding	KNOWN	AC069368.3	2	7	0.827880
chr15	64841883	64868007	64854945	ENSG00000241839.9	+	protein_coding	KNOWN	PLEKHO2	2	6	0.963303
chr15	64911902	64958700	64935301	ENSG00000166839.16	+	protein_coding	KNOWN	ANKDD1A	10	15	0.504945
chr15	64943240	64943672	64943456	ENSG00000275332.1	-	antisense	KNOWN	CTD-2017F17.1	1	1	0.339513
chr15	64950916	64951435	64951175	ENSG00000274383.1	-	antisense	KNOWN	CTD-2017F17.2	1	1	0.271541
chr15	64963021	64990310	64976665	ENSG00000090487.10	-	protein_coding	KNOWN	SPG21	14	9	0.317689
chr15	65001512	65029639	65015575	ENSG00000103707.9	-	protein_coding	KNOWN	MTFMT	7	10	0.149165
chr15	65026088	65026676	65026382	ENSG00000270218.1	+	processed_pseudogene	KNOWN	RP11-325L12.5	1	1	0.091992
chr15	65045370	65053396	65049383	ENSG00000186198.3	+	protein_coding	KNOWN	SLC51B	1	4	0.487420
chr15	65049188	65049802	65049495	ENSG00000277351.1	-	antisense	KNOWN	RP11-325L12.6	1	1	0.404701
chr15	65053337	65076690	65065013	ENSG00000103710.10	-	protein_coding	KNOWN	RASL12	3	5	0.555869
chr15	65076816	65078192	65077504	ENSG00000234438.3	+	protein_coding	KNOWN	KBTBD13	1	1	0.445629
chr15	65077894	65078008	65077951	ENSG00000281328.1	-	miRNA	NOVEL	AC013553.1	1	1	0.445629
chr15	65083042	65083663	65083352	ENSG00000278737.1	-	lincRNA	KNOWN	RP11-325L12.7	1	1	0.445629
chr15	65092770	65115197	65103983	ENSG00000246922.8	-	protein_coding	KNOWN	UBAP1L	4	6	0.921299
chr15	65105534	65105800	65105667	ENSG00000259258.1	+	processed_pseudogene	KNOWN	RP11-325L12.3	1	1	1.126638
chr15	65117379	65133836	65125607	ENSG00000090470.14	-	protein_coding	KNOWN	PDCD7	3	5	0.317313
chr15	65148219	65185342	65166780	ENSG00000166855.9	-	protein_coding	KNOWN	CLPX	6	14	0.265351
chr15	65194758	65211488	65203123	ENSG00000138615.5	-	protein_coding	KNOWN	CILP	1	9	0.537082
chr15	65226472	65226697	65226584	ENSG00000279268.1	-	TEC	KNOWN	RP11-628M2.1	1	1	0.320616
chr15	65229861	65229967	65229914	ENSG00000201709.1	+	snRNA	KNOWN	RNU6-686P	1	1	0.320616
chr15	65234460	65300618	65267539	ENSG00000138617.14	-	protein_coding	KNOWN	PARP16	5	6	0.325617
chr15	65285461	65285591	65285526	ENSG00000206903.1	-	snoRNA	NOVEL	SNORA24	1	1	0.290321
chr15	65296051	65296166	65296108	ENSG00000199568.1	+	snRNA	KNOWN	RNU5A-1	1	1	0.462360
chr15	65301922	65302311	65302116	ENSG00000259346.2	+	processed_pseudogene	KNOWN	RP11-349G13.2	1	1	0.462360
chr15	65304677	65304792	65304734	ENSG00000200156.1	+	snRNA	KNOWN	RNU5B-1	1	1	0.462360
chr15	65327127	65378040	65352583	ENSG00000174498.13	-	protein_coding	KNOWN	IGDCC3	5	14	0.586316
chr15	65381464	65423072	65402268	ENSG00000103742.11	-	protein_coding	KNOWN	IGDCC4	6	20	0.564617
chr15	65442463	65517704	65480083	ENSG00000074603.18	-	protein_coding	KNOWN	DPP8	16	21	0.300970
chr15	65458574	65459534	65459054	ENSG00000270690.1	+	processed_pseudogene	KNOWN	RP11-349G13.3	1	2	-0.012978
chr15	65475318	65475614	65475466	ENSG00000259232.2	-	processed_pseudogene	KNOWN	RP11-349G13.1	1	1	0.430161
chr15	65502741	65502836	65502788	ENSG00000252217.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.412127
chr15	65530418	65578352	65554385	ENSG00000074696.12	+	protein_coding	KNOWN	HACD3	12	13	0.267059
chr15	65553081	65553187	65553134	ENSG00000207449.1	-	snRNA	KNOWN	RNU6-19P	1	1	0.291832
chr15	65578753	65611289	65595021	ENSG00000138614.14	-	protein_coding	KNOWN	VWA9	17	12	0.000092
chr15	65611366	65660995	65636180	ENSG00000074621.13	+	protein_coding	KNOWN	SLC24A1	12	12	0.290861
chr15	65655620	65656085	65655852	ENSG00000275638.1	-	antisense	KNOWN	RP11-16E23.5	1	1	0.206324
chr15	65658046	65792293	65725169	ENSG00000174485.15	-	protein_coding	KNOWN	DENND4A	9	33	-0.068558
chr15	65696833	65696936	65696884	ENSG00000238311.1	-	snoRNA	NOVEL	snoU13	1	1	-0.184526
chr15	65719246	65719332	65719289	ENSG00000264737.1	-	miRNA	KNOWN	MIR4511	1	1	-0.120417
chr15	65726054	65891991	65809022	ENSG00000103769.9	+	protein_coding	KNOWN	RAB11A	9	5	0.075545
chr15	65766460	65767398	65766929	ENSG00000261544.1	-	sense_intronic	KNOWN	RP11-16E23.3	1	2	0.032286
chr15	65771176	65772139	65771657	ENSG00000259924.1	-	processed_pseudogene	KNOWN	RP11-16E23.4	1	1	0.018825
chr15	65816302	65817481	65816891	ENSG00000249271.2	-	processed_pseudogene	KNOWN	HNRNPA1P44	1	2	0.214476
chr15	65877849	65877983	65877916	ENSG00000281318.1	+	miRNA	NOVEL	AC084854.1	1	1	0.046188
chr15	65895079	66253747	66074413	ENSG00000157890.17	-	protein_coding	KNOWN	MEGF11	15	25	0.183494
chr15	66040233	66040332	66040282	ENSG00000263512.1	+	miRNA	KNOWN	MIR4311	1	1	0.173188
chr15	66278498	66293357	66285927	ENSG00000261318.1	-	antisense	KNOWN	RP11-653J6.1	1	2	0.202662
chr15	66293217	66333898	66313557	ENSG00000166938.12	+	protein_coding	KNOWN	DIS3L	14	17	0.147087
chr15	66314914	66331703	66323308	ENSG00000260773.1	-	antisense	KNOWN	RP11-352G18.2	1	2	0.153035
chr15	66336206	66386746	66361476	ENSG00000075131.9	-	protein_coding	KNOWN	TIPIN	6	8	0.264316
chr15	66347207	66347342	66347274	ENSG00000252712.1	-	scaRNA	KNOWN	SCARNA14	1	1	0.066901
chr15	66348276	66348375	66348325	ENSG00000223271.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.066901
chr15	66379337	66379915	66379626	ENSG00000240821.1	-	processed_pseudogene	KNOWN	RPL9P25	1	1	0.332306
chr15	66386817	66492312	66439564	ENSG00000169032.9	+	protein_coding	KNOWN	MAP2K1	3	11	0.289746
chr15	66414933	66415198	66415065	ENSG00000261102.2	-	processed_pseudogene	KNOWN	ATP5J2P6	1	1	0.257670
chr15	66446455	66446777	66446616	ENSG00000243404.2	-	processed_pseudogene	KNOWN	RPL35AP32	1	1	0.527640
chr15	66488658	66492109	66490383	ENSG00000261351.2	-	antisense	KNOWN	CTD-3185P2.1	1	2	0.369016
chr15	66490135	66497813	66493974	ENSG00000174446.12	-	protein_coding	KNOWN	SNAPC5	8	4	0.469415
chr15	66496958	66497034	66496996	ENSG00000266589.1	-	miRNA	KNOWN	MIR4512	1	1	0.469415
chr15	66498015	66524532	66511273	ENSG00000174444.14	-	protein_coding	KNOWN	RPL4	17	11	0.170378
chr15	66501250	66501318	66501284	ENSG00000199574.1	-	snoRNA	KNOWN	SNORD18C	1	1	0.469415
chr15	66502019	66502089	66502054	ENSG00000280554.1	-	snoRNA	NOVEL	snoU18	1	1	0.469415
chr15	66502020	66502091	66502055	ENSG00000202529.1	-	snoRNA	KNOWN	SNORD18B	1	1	0.469415
chr15	66502812	66502910	66502861	ENSG00000199673.1	-	snoRNA	KNOWN	SNORD16	1	1	0.469415
chr15	66503243	66503314	66503278	ENSG00000200623.1	-	snoRNA	KNOWN	SNORD18A	1	1	0.469415
chr15	66504959	66550128	66527543	ENSG00000174442.11	+	protein_coding	KNOWN	ZWILCH	14	19	0.049713
chr15	66547179	66565979	66556579	ENSG00000188501.11	-	protein_coding	KNOWN	LCTL	5	13	0.245520
chr15	66582190	66685794	66633992	ENSG00000259471.1	+	lincRNA	KNOWN	LINC01169	1	5	0.568433
chr15	66702228	66782848	66742538	ENSG00000137834.14	+	protein_coding	KNOWN	SMAD6	5	5	0.716755
chr15	66740445	66741151	66740798	ENSG00000274995.1	+	sense_intronic	KNOWN	RP11-321F6.2	1	1	0.628045
chr15	66808404	66810560	66809482	ENSG00000270490.1	+	processed_pseudogene	KNOWN	RP11-622C24.1	1	1	0.522289
chr15	66860303	66867023	66863663	ENSG00000277152.1	+	lincRNA	KNOWN	RP11-622C24.2	1	1	0.812838
chr15	66919811	66931755	66925783	ENSG00000259437.1	+	lincRNA	KNOWN	RP11-798K3.4	1	2	0.222902
chr15	66931537	66956518	66944027	ENSG00000259289.2	-	lincRNA	KNOWN	RP11-798K3.3	1	3	0.549326
chr15	66984108	67059253	67021680	ENSG00000259347.5	-	lincRNA	KNOWN	RP11-798K3.2	3	5	0.338811
chr15	67000814	67001085	67000949	ENSG00000259246.4	-	processed_pseudogene	KNOWN	HMGN2P47	1	1	0.238540
chr15	67063763	67195195	67129479	ENSG00000166949.15	+	protein_coding	KNOWN	SMAD3	15	9	0.575568
chr15	67142734	67146939	67144836	ENSG00000259202.1	-	antisense	KNOWN	RP11-342M21.2	1	3	0.720023
chr15	67201033	67255195	67228114	ENSG00000103591.12	-	protein_coding	KNOWN	AAGAB	7	10	0.241372
chr15	67232446	67232837	67232641	ENSG00000242634.1	+	processed_pseudogene	KNOWN	RPS24P16	1	1	0.157087
chr15	67254800	67502260	67378530	ENSG00000103599.19	+	protein_coding	KNOWN	IQCH	14	21	-0.011824
chr15	67403619	67521844	67462731	ENSG00000259673.5	-	lincRNA	KNOWN	IQCH-AS1	5	6	0.143052
chr15	67521068	67530143	67525605	ENSG00000189227.5	+	protein_coding	KNOWN	C15orf61	4	2	0.045422
chr15	67541072	67542604	67541838	ENSG00000270964.1	-	lincRNA	KNOWN	RP11-502I4.3	1	1	0.139926
chr15	67542709	67807123	67674916	ENSG00000137764.19	+	protein_coding	KNOWN	MAP2K5	12	22	0.018668
chr15	67627852	67629135	67628493	ENSG00000259512.3	+	processed_pseudogene	KNOWN	HNRNPA1P5	1	2	0.303047
chr15	67819704	67834561	67827132	ENSG00000188779.10	+	protein_coding	KNOWN	SKOR1	4	15	0.665346
chr15	67832725	67873866	67853295	ENSG00000259410.5	+	processed_transcript	KNOWN	RP11-34F13.3	2	3	0.378695
chr15	67834310	67838879	67836594	ENSG00000245719.1	-	lincRNA	KNOWN	RP11-34F13.2	1	3	0.671416
chr15	67839939	67840045	67839992	ENSG00000206625.1	-	snRNA	KNOWN	RNU6-1	1	1	0.671416
chr15	67974391	67974625	67974508	ENSG00000261702.2	-	processed_pseudogene	KNOWN	RP11-282M16.1	1	1	0.132181
chr15	67985059	67986288	67985673	ENSG00000260109.1	+	unprocessed_pseudogene	KNOWN	RP11-883G10.1	1	3	0.132181
chr15	68054179	68198603	68126391	ENSG00000033800.13	+	protein_coding	KNOWN	PIAS1	8	15	0.027231
chr15	68190705	68206110	68198407	ENSG00000129007.14	-	protein_coding	KNOWN	CALML4	8	5	0.377192
chr15	68193801	68229718	68211759	ENSG00000260007.1	-	protein_coding	KNOWN	RP11-315D16.2	1	3	0.583548
chr15	68206992	68257211	68232101	ENSG00000128973.11	-	protein_coding	KNOWN	CLN6	9	7	0.549547
chr15	68229672	68229789	68229730	ENSG00000264779.1	+	miRNA	NOVEL	AC107871.1	1	1	0.753057
chr15	68254549	68254939	68254744	ENSG00000260602.2	+	processed_pseudogene	KNOWN	HMGN2P40	1	1	0.124413
chr15	68267792	68277994	68272893	ENSG00000260657.2	-	lincRNA	KNOWN	RP11-315D16.4	2	3	0.235088
chr15	68277803	68295865	68286834	ENSG00000169018.5	+	protein_coding	KNOWN	FEM1B	4	2	0.229619
chr15	68296533	68432162	68364347	ENSG00000137809.16	-	protein_coding	KNOWN	ITGA11	7	30	0.484557
chr15	68578969	68727806	68653387	ENSG00000103647.12	+	protein_coding	KNOWN	CORO2B	4	12	0.517287
chr15	68749501	68750691	68750096	ENSG00000271232.1	+	processed_pseudogene	KNOWN	CARSP1	1	2	0.127502
chr15	68778535	68820897	68799716	ENSG00000140350.15	-	protein_coding	KNOWN	ANP32A	11	7	0.501906
chr15	68801850	68801925	68801887	ENSG00000265195.1	-	miRNA	KNOWN	MIR4312	1	1	0.601005
chr15	68818221	68946811	68882516	ENSG00000258484.3	+	protein_coding	KNOWN	SPESP1	3	2	0.012234
chr15	68833830	68834749	68834289	ENSG00000259286.3	+	processed_pseudogene	KNOWN	RP11-696L21.2	1	1	0.144143
chr15	68930504	69028889	68979696	ENSG00000137808.12	+	processed_transcript	KNOWN	RP11-809H16.2	1	4	-0.050669
chr15	68930525	69062743	68996634	ENSG00000255346.9	+	protein_coding	KNOWN	NOX5	9	17	0.029894
chr15	69022230	69024176	69023203	ENSG00000273851.1	+	transcribed_processed_pseudogene	KNOWN	RP11-809H16.3	1	1	0.195332
chr15	69037549	69043565	69040557	ENSG00000259265.1	-	antisense	KNOWN	RP11-809H16.4	1	2	0.156122
chr15	69072926	69095820	69084373	ENSG00000212766.9	+	lincRNA	KNOWN	EWSAT1	8	5	0.144833
chr15	69080879	69099987	69090433	ENSG00000259222.2	+	lincRNA	KNOWN	RP11-809H16.5	1	5	0.131057
chr15	69103820	69103945	69103882	ENSG00000281169.1	+	miRNA	NOVEL	AC027088.1	1	1	0.106565
chr15	69160584	69272217	69216400	ENSG00000138604.9	+	protein_coding	KNOWN	GLCE	4	5	-0.107665
chr15	69160651	69160724	69160687	ENSG00000266374.1	+	miRNA	NOVEL	AC026512.1	1	1	-0.014923
chr15	69247109	69247210	69247159	ENSG00000265047.3	+	miRNA	NOVEL	AC026992.1	1	1	0.091992
chr15	69250525	69250795	69250660	ENSG00000241774.3	-	misc_RNA	KNOWN	RN7SL438P	1	1	-0.204990
chr15	69278328	69298763	69288545	ENSG00000261634.3	-	antisense	KNOWN	RP11-352D13.6	3	4	0.219330
chr15	69278675	69295322	69286998	ENSG00000259504.2	+	lincRNA	KNOWN	RP11-352D13.5	2	4	0.157939
chr15	69298947	69407780	69353363	ENSG00000137819.13	+	protein_coding	KNOWN	PAQR5	6	9	0.390375
chr15	69325293	69325420	69325356	ENSG00000221376.1	-	snoRNA	NOVEL	SNORA77	1	1	0.331375
chr15	69367585	69367681	69367633	ENSG00000252972.1	+	rRNA	KNOWN	RNA5SP398	1	1	0.393161
chr15	69391192	69392149	69391670	ENSG00000259645.1	+	sense_intronic	KNOWN	RP11-253M7.6	1	2	0.711306
chr15	69396904	69415029	69405966	ENSG00000259426.5	-	antisense	KNOWN	RP11-253M7.1	3	3	0.510076
chr15	69406441	69406552	69406496	ENSG00000207395.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.711306
chr15	69414246	69448427	69431336	ENSG00000137807.13	+	protein_coding	KNOWN	KIF23	13	23	-0.105572
chr15	69434466	69435120	69434793	ENSG00000259191.2	-	processed_pseudogene	KNOWN	RP11-253M7.3	1	1	-0.184020
chr15	69452784	69456194	69454489	ENSG00000137818.11	+	protein_coding	KNOWN	RPLP1	5	4	0.349324
chr15	69457941	69458149	69458045	ENSG00000207119.2	-	snoRNA	NOVEL	U3	1	1	0.349324
chr15	69458522	69461806	69460164	ENSG00000259215.1	-	lincRNA	KNOWN	RP11-253M7.4	1	2	0.349324
chr15	69463026	69571440	69517233	ENSG00000245750.7	+	lincRNA	KNOWN	DRAIC	8	6	0.230286
chr15	69564724	69565790	69565257	ENSG00000259457.1	-	lincRNA	KNOWN	RP11-279F6.2	1	2	0.379973
chr15	69592129	69695750	69643939	ENSG00000259641.5	+	lincRNA	KNOWN	PCAT29	4	5	0.082652
chr15	69730740	69730822	69730781	ENSG00000238870.1	-	miRNA	NOVEL	AC009677.1	1	1	0.013280
chr15	69803316	69804046	69803681	ENSG00000259496.2	-	processed_pseudogene	KNOWN	RP11-19J5.1	1	1	0.177299
chr15	69820756	69822856	69821806	ENSG00000259309.1	-	lincRNA	KNOWN	RP11-19J5.2	1	3	0.297461
chr15	69835234	69843120	69839177	ENSG00000259703.5	+	lincRNA	KNOWN	LINC00593	2	5	0.191959
chr15	70047790	70098176	70072983	ENSG00000140332.15	-	protein_coding	KNOWN	TLE3	26	20	0.412099
chr15	70079372	70079468	70079420	ENSG00000207965.1	-	miRNA	KNOWN	MIR629	1	1	0.427740
chr15	70193236	70193341	70193288	ENSG00000200216.2	+	snRNA	KNOWN	RNU6-745P	1	1	0.312190
chr15	70195638	70198509	70197073	ENSG00000259252.1	-	lincRNA	KNOWN	AC011648.1	1	3	0.312190
chr15	70321576	70326742	70324159	ENSG00000259503.1	+	lincRNA	KNOWN	RP11-543G18.1	1	2	0.211662
chr15	70503907	70505928	70504917	ENSG00000259473.1	-	lincRNA	KNOWN	RP11-96C21.1	1	2	0.603373
chr15	70570958	70586606	70578782	ENSG00000280639.1	-	lincRNA	KNOWN	RP11-96C21.2	1	2	0.313316
chr15	70602124	70602516	70602320	ENSG00000259227.2	+	processed_pseudogene	KNOWN	RP11-64K10.1	1	1	0.546107
chr15	70615547	70616567	70616057	ENSG00000281264.1	+	lincRNA	KNOWN	SALRNA3	1	1	0.434384
chr15	70635249	70637314	70636281	ENSG00000280515.1	+	lincRNA	KNOWN	SALRNA2	1	1	0.458263
chr15	70654554	70763593	70709073	ENSG00000137831.14	-	protein_coding	KNOWN	UACA	14	19	-0.106369
chr15	70748932	70754177	70751554	ENSG00000259532.1	+	lincRNA	KNOWN	RP11-138H8.2	1	2	0.049486
chr15	70758269	70758856	70758562	ENSG00000274297.1	-	sense_intronic	KNOWN	RP11-138H8.8	1	1	0.083222
chr15	70768011	70778868	70773439	ENSG00000259624.1	-	antisense	KNOWN	RP11-138H8.3	1	2	0.411212
chr15	70791013	70791486	70791249	ENSG00000259452.2	+	processed_pseudogene	KNOWN	RP11-138H8.4	1	1	0.247910
chr15	70796597	70802688	70799642	ENSG00000235420.7	-	transcribed_processed_pseudogene	KNOWN	RPL29P30	3	4	0.247910
chr15	70829130	70854159	70841644	ENSG00000166173.10	-	protein_coding	KNOWN	LARP6	5	3	0.282909
chr15	70848883	70849770	70849326	ENSG00000259744.1	-	sense_intronic	KNOWN	RP11-138H8.6	1	2	0.261086
chr15	70853239	71053657	70953448	ENSG00000137821.11	+	protein_coding	KNOWN	LRRC49	29	18	-0.044582
chr15	70858714	70860162	70859438	ENSG00000259470.2	+	processed_pseudogene	KNOWN	KRT8P9	1	1	0.369101
chr15	70881342	70892785	70887063	ENSG00000129028.8	-	protein_coding	KNOWN	THAP10	2	3	0.027985
chr15	71063101	71063989	71063545	ENSG00000242276.2	-	processed_pseudogene	KNOWN	RPL5P3	1	1	0.117832
chr15	71096952	71783383	71440167	ENSG00000187720.14	+	protein_coding	KNOWN	THSD4	7	18	0.241077
chr15	71110244	71115494	71112869	ENSG00000225362.8	-	protein_coding	KNOWN	CT62	4	4	0.154276
chr15	71147650	71189042	71168346	ENSG00000259964.6	-	antisense	KNOWN	THSD4-AS1	5	5	0.013148
chr15	71164770	71165415	71165092	ENSG00000259781.1	-	processed_pseudogene	KNOWN	RP11-673C5.1	1	1	0.114360
chr15	71341158	71341712	71341435	ENSG00000212664.5	-	processed_pseudogene	KNOWN	RP11-592N21.1	1	1	0.298954
chr15	71342324	71348471	71345397	ENSG00000260586.1	+	sense_intronic	KNOWN	RP11-592N21.2	1	3	0.298954
chr15	71547280	71549832	71548556	ENSG00000278408.1	-	antisense	KNOWN	RP11-1123I8.1	1	3	0.301220
chr15	71772610	71772689	71772649	ENSG00000274096.1	+	miRNA	NOVEL	AC104938.1	1	1	0.146148
chr15	71792638	71818259	71805448	ENSG00000278570.4	+	protein_coding	KNOWN	NR2E3	4	10	0.557919
chr15	71818396	71823384	71820890	ENSG00000260037.5	+	antisense	KNOWN	CTD-2524L6.3	3	5	0.674139
chr15	71822289	72118577	71970433	ENSG00000066933.15	-	protein_coding	KNOWN	MYO9A	21	42	0.018506
chr15	71858570	71858686	71858628	ENSG00000200873.1	+	rRNA	KNOWN	RNA5SP399	1	1	-0.061020
chr15	71972206	72040265	72006235	ENSG00000261632.1	+	antisense	KNOWN	RP11-390D11.1	1	5	-0.060591
chr15	72041194	72041653	72041423	ENSG00000260576.1	-	processed_pseudogene	KNOWN	EIF5A2P1	1	1	-0.228143
chr15	72045183	72045367	72045275	ENSG00000222094.1	+	snRNA	KNOWN	RNU2-65P	1	1	-0.228143
chr15	72051251	72051329	72051290	ENSG00000223253.1	+	miRNA	NOVEL	AC022872.1	1	1	0.223987
chr15	72114258	72143688	72128973	ENSG00000166192.14	+	protein_coding	KNOWN	SENP8	5	3	0.173063
chr15	72134641	72135436	72135038	ENSG00000243568.2	+	processed_pseudogene	KNOWN	RP11-2I17.1	1	1	0.006092
chr15	72140504	72155459	72147981	ENSG00000260173.1	-	antisense	KNOWN	RP11-2I17.4	1	2	0.067098
chr15	72159807	72197785	72178796	ENSG00000175318.11	-	protein_coding	KNOWN	GRAMD2	13	12	0.457953
chr15	72199029	72231822	72215425	ENSG00000067225.17	-	protein_coding	KNOWN	PKM	25	12	0.534059
chr15	72241181	72272999	72257090	ENSG00000137817.16	-	protein_coding	KNOWN	PARP6	23	24	0.603307
chr15	72266746	72319946	72293346	ENSG00000273025.1	-	protein_coding	KNOWN	RP11-106M3.5	1	15	0.490855
chr15	72278867	72351794	72315330	ENSG00000261460.1	+	antisense	KNOWN	RP11-106M3.3	1	3	0.398870
chr15	72284727	72375981	72330354	ENSG00000260729.1	-	protein_coding	KNOWN	RP11-106M3.2	1	16	0.409319
chr15	72284727	72320129	72302428	ENSG00000140488.15	-	protein_coding	KNOWN	CELF6	5	13	0.572409
chr15	72340919	72376476	72358697	ENSG00000213614.9	-	protein_coding	KNOWN	HEXA	16	14	0.314234
chr15	72376113	72378788	72377450	ENSG00000260339.1	+	antisense	KNOWN	HEXA-AS1	1	1	0.231849
chr15	72379215	72379710	72379462	ENSG00000243007.1	-	processed_pseudogene	KNOWN	RPL12P35	1	1	0.231849
chr15	72398273	72408029	72403151	ENSG00000187806.7	+	protein_coding	KNOWN	TMEM202	3	5	0.249533
chr15	72407778	72475168	72441473	ENSG00000261423.1	-	lincRNA	KNOWN	RP11-1007O24.3	2	4	-0.029261
chr15	72450657	72451474	72451065	ENSG00000271072.1	+	processed_pseudogene	KNOWN	PHBP20	1	1	0.025266
chr15	72465128	72466262	72465695	ENSG00000261187.1	-	lincRNA	KNOWN	RP11-1007O24.2	1	1	0.025266
chr15	72474326	72602985	72538655	ENSG00000166233.12	+	protein_coding	KNOWN	ARIH1	10	14	0.139178
chr15	72587217	72587313	72587265	ENSG00000207690.1	+	miRNA	KNOWN	MIR630	1	1	0.265323
chr15	72589691	72591845	72590768	ENSG00000260534.1	+	sense_overlapping	KNOWN	RP11-1006G14.4	1	1	0.224358
chr15	72604399	72605008	72604703	ENSG00000278313.1	-	unprocessed_pseudogene	KNOWN	RP11-1006G14.5	1	2	0.217523
chr15	72605183	72612326	72608754	ENSG00000260144.1	+	unprocessed_pseudogene	KNOWN	RP11-361M10.3	1	11	0.261938
chr15	72608481	72636919	72622700	ENSG00000259783.5	-	lincRNA	KNOWN	RP11-1006G14.2	2	4	0.341639
chr15	72615810	72618250	72617030	ENSG00000260672.1	+	lincRNA	KNOWN	RP11-1006G14.1	1	1	0.353859
chr15	72638821	72640125	72639473	ENSG00000259909.1	+	unprocessed_pseudogene	KNOWN	RP11-1006G14.3	1	5	0.333546
chr15	72654738	72666394	72660566	ENSG00000215186.6	+	protein_coding	KNOWN	GOLGA6B	2	18	0.358637
chr15	72664577	72664799	72664688	ENSG00000274350.1	+	misc_RNA	KNOWN	RN7SL853P	1	1	0.358637
chr15	72675783	72686149	72680966	ENSG00000175202.3	-	protein_coding	KNOWN	HIGD2B	1	3	0.295351
chr15	72682266	72682904	72682585	ENSG00000261281.1	-	transcribed_processed_pseudogene	KNOWN	RP11-361M10.4	1	2	0.295351
chr15	72686179	72738476	72712327	ENSG00000140463.13	+	protein_coding	KNOWN	BBS4	18	17	0.023810
chr15	72751369	72785846	72768607	ENSG00000159322.17	-	protein_coding	KNOWN	ADPGK	14	7	0.092215
chr15	72782835	72798199	72790517	ENSG00000260898.5	+	antisense	KNOWN	ADPGK-AS1	2	3	0.067975
chr15	72899399	72900260	72899829	ENSG00000259259.1	-	processed_pseudogene	KNOWN	NPM1P42	1	1	-0.152812
chr15	73051710	73305206	73178458	ENSG00000067141.16	+	protein_coding	KNOWN	NEO1	11	30	-0.254886
chr15	73143236	73143518	73143377	ENSG00000259691.2	-	processed_pseudogene	KNOWN	FKBP1AP2	1	1	-0.401048
chr15	73161779	73162928	73162353	ENSG00000259440.2	-	processed_pseudogene	KNOWN	NPM1P43	1	2	-0.492971
chr15	73255334	73256109	73255721	ENSG00000259528.1	-	antisense	KNOWN	RP11-272D12.2	1	2	-0.264152
chr15	73319859	73369264	73344561	ENSG00000138622.3	-	protein_coding	KNOWN	HCN4	1	8	0.335326
chr15	73335260	73342387	73338823	ENSG00000259650.1	+	antisense	KNOWN	RP11-272D12.1	2	4	0.369899
chr15	73443158	73560014	73501586	ENSG00000183324.10	+	protein_coding	KNOWN	REC114	2	6	-0.148657
chr15	73483196	73483943	73483569	ENSG00000259186.1	-	processed_pseudogene	KNOWN	MRPS15P1	1	1	-0.271756
chr15	73560014	73634134	73597074	ENSG00000156642.16	-	protein_coding	KNOWN	NPTN	10	9	0.238118
chr15	73567012	73569294	73568153	ENSG00000281183.1	-	sense_intronic	KNOWN	NPTN-IT1	1	1	-0.018332
chr15	73683966	73714518	73699242	ENSG00000103855.17	+	protein_coding	KNOWN	CD276	19	10	0.639503
chr15	73730048	73731711	73730879	ENSG00000276807.1	-	lincRNA	KNOWN	RP11-8P11.4	1	1	0.315316
chr15	73735431	73752747	73744089	ENSG00000205363.5	-	protein_coding	KNOWN	C15orf59	4	3	0.406608
chr15	73752317	73770613	73761465	ENSG00000260469.2	+	lincRNA	KNOWN	C15orf59-AS1	2	3	0.878201
chr15	73870950	73873366	73872158	ENSG00000260624.1	-	antisense	KNOWN	RP11-24D15.1	2	3	0.517125
chr15	73873608	73889214	73881411	ENSG00000167139.8	+	protein_coding	KNOWN	TBC1D21	3	11	0.517125
chr15	73891409	73891487	73891448	ENSG00000222064.1	+	miRNA	NOVEL	AC108137.1	1	1	0.576292
chr15	73908071	73928248	73918159	ENSG00000261801.5	-	antisense	KNOWN	LOXL1-AS1	13	4	0.397737
chr15	73925989	73952137	73939063	ENSG00000129038.15	+	protein_coding	KNOWN	LOXL1	5	8	0.767233
chr15	73978923	73994622	73986772	ENSG00000067221.13	-	protein_coding	KNOWN	STOML1	13	8	0.626247
chr15	73994673	74047812	74021242	ENSG00000140464.19	+	protein_coding	KNOWN	PML	22	9	0.747413
chr15	74062780	74063785	74063282	ENSG00000260096.1	+	unprocessed_pseudogene	KNOWN	DNM1P33	1	2	0.752017
chr15	74069857	74082550	74076203	ENSG00000159289.6	-	protein_coding	KNOWN	GOLGA6A	4	18	0.699335
chr15	74072454	74072676	74072565	ENSG00000278604.1	-	misc_RNA	KNOWN	RN7SL429P	1	1	0.698739
chr15	74097106	74098414	74097760	ENSG00000214702.6	-	unprocessed_pseudogene	KNOWN	RP11-247C2.1	1	5	0.337262
chr15	74100311	74138540	74119425	ENSG00000167178.15	+	protein_coding	KNOWN	ISLR2	12	4	0.405536
chr15	74115396	74115469	74115432	ENSG00000274013.1	-	miRNA	NOVEL	AC010931.1	1	1	0.217523
chr15	74125915	74129278	74127596	ENSG00000248540.2	-	lincRNA	KNOWN	RP11-247C2.2	2	2	0.217523
chr15	74152800	74179226	74166013	ENSG00000261543.1	-	antisense	KNOWN	RP11-665J16.1	1	3	0.354805
chr15	74162340	74162620	74162480	ENSG00000278348.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.206812
chr15	74173671	74176872	74175271	ENSG00000129009.12	+	protein_coding	KNOWN	ISLR	4	2	0.630661
chr15	74179466	74212267	74195866	ENSG00000137868.18	-	protein_coding	KNOWN	STRA6	22	19	0.676849
chr15	74202705	74221557	74212131	ENSG00000259264.5	+	antisense	KNOWN	RP11-60L3.1	4	5	0.850300
chr15	74236289	74336472	74286380	ENSG00000140481.13	+	protein_coding	KNOWN	CCDC33	7	19	0.745494
chr15	74299503	74304527	74302015	ENSG00000280309.1	+	TEC	KNOWN	RP11-60L3.3	1	1	0.575416
chr15	74303005	74304343	74303674	ENSG00000261384.1	+	sense_intronic	KNOWN	RP11-60L3.2	1	2	0.575416
chr15	74311516	74319688	74315602	ENSG00000277749.1	-	antisense	KNOWN	RP11-60L3.6	1	2	0.816757
chr15	74337759	74367740	74352749	ENSG00000140459.17	-	protein_coding	KNOWN	CYP11A1	10	9	0.653624
chr15	74350768	74364620	74357694	ENSG00000260266.1	+	transcribed_processed_pseudogene	KNOWN	CTD-2311M21.2	3	4	0.618922
chr15	74365435	74371211	74368323	ENSG00000261821.2	+	antisense	KNOWN	CTD-2311M21.3	1	3	0.653033
chr15	74374678	74375511	74375094	ENSG00000274937.1	+	lincRNA	KNOWN	CTD-2311M21.4	1	1	0.781485
chr15	74379083	74390535	74384809	ENSG00000277718.1	+	lincRNA	KNOWN	CTD-2311M21.5	1	3	0.804095
chr15	74409289	74434467	74421878	ENSG00000138623.9	-	protein_coding	KNOWN	SEMA7A	5	14	1.274982
chr15	74411357	74411432	74411394	ENSG00000277391.1	-	miRNA	KNOWN	MIR6881	1	1	1.298992
chr15	74445977	74461182	74453579	ENSG00000138629.15	-	protein_coding	KNOWN	UBL7	9	12	0.917603
chr15	74461265	74481302	74471283	ENSG00000247240.7	+	antisense	KNOWN	UBL7-AS1	5	5	0.638989
chr15	74478070	74490286	74484178	ENSG00000260103.2	-	transcribed_processed_pseudogene	KNOWN	RP11-10O17.1	2	2	0.497916
chr15	74489602	74516959	74503280	ENSG00000261775.1	+	lincRNA	KNOWN	RP11-10O17.3	1	4	0.685800
chr15	74490959	74491028	74490993	ENSG00000212279.2	-	snoRNA	NOVEL	SNORD77	1	1	0.676954
chr15	74541177	74598131	74569654	ENSG00000179361.17	+	protein_coding	KNOWN	ARID3B	6	9	0.453848
chr15	74598500	74645414	74621957	ENSG00000179335.18	+	protein_coding	KNOWN	CLK3	27	13	0.901837
chr15	74598919	74599397	74599158	ENSG00000275527.1	-	lincRNA	KNOWN	CTD-3154N5.2	1	1	0.511895
chr15	74613194	74615596	74614395	ENSG00000260919.1	-	antisense	KNOWN	CTD-3154N5.1	1	2	1.095928
chr15	74630558	74696292	74663425	ENSG00000179151.11	-	protein_coding	KNOWN	EDC3	18	10	0.558290
chr15	74719542	74725610	74722576	ENSG00000140465.13	-	protein_coding	KNOWN	CYP1A1	10	8	0.174454
chr15	74748844	74756202	74752523	ENSG00000140505.6	+	protein_coding	KNOWN	CYP1A2	1	7	0.689618
chr15	74782057	74803198	74792627	ENSG00000103653.16	+	protein_coding	KNOWN	CSK	14	15	1.126241
chr15	74788672	74788757	74788714	ENSG00000264386.1	-	miRNA	KNOWN	MIR4513	1	1	1.112750
chr15	74812716	74825758	74819237	ENSG00000140506.16	+	protein_coding	KNOWN	LMAN1L	10	14	0.846879
chr15	74816223	74831795	74824009	ENSG00000261606.5	+	processed_transcript	KNOWN	RP11-414J4.2	2	14	0.870381
chr15	74826547	74831802	74829174	ENSG00000213578.5	+	protein_coding	KNOWN	CPLX3	1	3	0.916794
chr15	74836116	74843346	74839731	ENSG00000140474.12	-	protein_coding	KNOWN	ULK3	23	16	1.050651
chr15	74840642	74840707	74840674	ENSG00000275411.1	-	miRNA	KNOWN	MIR6882	1	1	1.050651
chr15	74843730	74873365	74858547	ENSG00000140497.16	-	protein_coding	KNOWN	SCAMP2	12	9	1.053788
chr15	74890005	74902219	74896112	ENSG00000178802.17	+	protein_coding	KNOWN	MPI	24	8	0.724506
chr15	74899987	74907121	74903554	ENSG00000178761.14	-	protein_coding	KNOWN	FAM219B	19	7	0.724506
chr15	74919791	74938168	74928979	ENSG00000178741.11	-	protein_coding	KNOWN	COX5A	6	5	0.705872
chr15	74954416	74957464	74955940	ENSG00000178718.6	-	protein_coding	KNOWN	RPP25	1	1	1.071814
chr15	74957219	75021496	74989357	ENSG00000198794.11	+	protein_coding	KNOWN	SCAMP5	18	8	0.766637
chr15	74976240	74976573	74976406	ENSG00000261813.2	-	processed_pseudogene	KNOWN	RP11-151H2.3	1	1	0.607450
chr15	74983274	74983376	74983325	ENSG00000199580.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.607450
chr15	75012418	75012484	75012451	ENSG00000273798.1	+	miRNA	NOVEL	AC015720.1	1	1	0.793147
chr15	75022980	75023256	75023118	ENSG00000260483.2	+	processed_pseudogene	KNOWN	RP11-151H2.1	1	1	0.793147
chr15	75023555	75117462	75070508	ENSG00000138621.11	+	protein_coding	KNOWN	PPCDC	11	6	0.641460
chr15	75114261	75114868	75114564	ENSG00000260152.2	+	processed_pseudogene	KNOWN	RP11-69H7.4	1	1	0.395773
chr15	75120265	75120562	75120413	ENSG00000203411.3	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.395773
chr15	75121536	75121666	75121601	ENSG00000252722.1	-	scaRNA	NOVEL	SCARNA20	1	1	0.395773
chr15	75186651	75186968	75186809	ENSG00000240366.1	-	processed_pseudogene	KNOWN	RPL36AP45	1	1	0.830760
chr15	75195643	75212169	75203906	ENSG00000167173.18	+	protein_coding	KNOWN	C15orf39	7	4	0.816890
chr15	75211301	75212167	75211734	ENSG00000261779.1	-	antisense	KNOWN	RP11-69H7.3	1	2	1.087640
chr15	75225871	75225971	75225921	ENSG00000264950.1	+	miRNA	NOVEL	AC113208.1	1	1	1.087640
chr15	75226753	75233951	75230352	ENSG00000260660.1	-	lincRNA	KNOWN	RP11-69H7.2	2	5	0.977440
chr15	75249232	75249407	75249319	ENSG00000260104.1	-	unprocessed_pseudogene	KNOWN	RP11-817O13.1	1	1	0.886927
chr15	75251743	75252934	75252338	ENSG00000261205.2	-	processed_pseudogene	KNOWN	NIFKP4	1	1	0.499416
chr15	75258558	75295530	75277044	ENSG00000140478.14	+	protein_coding	KNOWN	GOLGA6D	2	18	0.561843
chr15	75258599	75270199	75264399	ENSG00000167195.7	+	protein_coding	KNOWN	GOLGA6C	1	18	0.501136
chr15	75268430	75268652	75268541	ENSG00000277295.1	+	misc_RNA	KNOWN	RN7SL489P	1	1	0.499416
chr15	75292706	75292928	75292817	ENSG00000275992.1	+	misc_RNA	KNOWN	RN7SL327P	1	1	0.556081
chr15	75299953	75302965	75301459	ENSG00000260357.1	-	transcribed_unprocessed_pseudogene	KNOWN	DNM1P34	2	2	0.556081
chr15	75321397	75322693	75322045	ENSG00000259790.1	-	transcribed_processed_pseudogene	KNOWN	ANP32BP1	2	1	0.390171
chr15	75335891	75343224	75339557	ENSG00000140365.15	+	protein_coding	KNOWN	COMMD4	25	9	0.718623
chr15	75346744	75347161	75346952	ENSG00000275645.1	-	antisense	KNOWN	RP11-817O13.9	1	1	0.718623
chr15	75346955	75357114	75352034	ENSG00000140398.13	+	protein_coding	KNOWN	NEIL1	24	11	1.019969
chr15	75353611	75353685	75353648	ENSG00000207636.1	-	miRNA	KNOWN	MIR631	1	1	1.148894
chr15	75355207	75368630	75361918	ENSG00000140400.14	-	protein_coding	KNOWN	MAN2C1	45	26	1.148894
chr15	75368155	75369584	75368869	ENSG00000260274.1	+	lincRNA	KNOWN	RP11-817O13.8	1	1	1.148894
chr15	75369379	75455842	75412610	ENSG00000169375.15	-	protein_coding	KNOWN	SIN3A	15	21	0.618681
chr15	75388267	75388828	75388547	ENSG00000241890.1	+	processed_pseudogene	KNOWN	RPL13P4	1	1	0.954910
chr15	75415249	75416020	75415634	ENSG00000261714.2	+	processed_pseudogene	KNOWN	CTD-2562G15.2	1	2	0.454562
chr15	75452964	75453947	75453455	ENSG00000276744.1	-	sense_intronic	KNOWN	CTD-2562G15.3	1	1	0.789583
chr15	75463251	75579289	75521270	ENSG00000169410.9	-	protein_coding	KNOWN	PTPN9	6	14	0.569529
chr15	75480661	75480836	75480748	ENSG00000260165.1	+	unprocessed_pseudogene	KNOWN	CTD-2323K18.3	1	1	0.602823
chr15	75512770	75513040	75512905	ENSG00000259931.2	-	processed_pseudogene	KNOWN	CTD-2323K18.2	1	1	0.689078
chr15	75527150	75601205	75564177	ENSG00000260269.5	-	processed_transcript	KNOWN	CTD-2323K18.1	4	4	0.592144
chr15	75540933	75541205	75541069	ENSG00000281061.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.491163
chr15	75598083	75626469	75612276	ENSG00000169371.13	-	protein_coding	KNOWN	SNUPN	11	10	0.642751
chr15	75624793	75625690	75625241	ENSG00000260235.1	+	antisense	KNOWN	CTD-2026K11.3	1	2	0.572474
chr15	75636139	75639239	75637689	ENSG00000260206.1	+	antisense	KNOWN	CTD-2026K11.2	1	3	0.574933
chr15	75639085	75648706	75643895	ENSG00000177971.8	-	protein_coding	KNOWN	IMP3	3	3	0.574933
chr15	75639760	75640976	75640368	ENSG00000275454.1	+	antisense	KNOWN	CTD-2026K11.4	1	1	0.574933
chr15	75645020	75645442	75645231	ENSG00000274515.1	+	antisense	KNOWN	CTD-2026K11.5	1	1	0.574933
chr15	75647906	75662301	75655103	ENSG00000173548.8	+	protein_coding	KNOWN	SNX33	2	3	0.879885
chr15	75674322	75712848	75693585	ENSG00000173546.7	-	protein_coding	KNOWN	CSPG4	1	10	1.096764
chr15	75676227	75677162	75676694	ENSG00000260892.1	+	antisense	KNOWN	CTD-2026K11.1	1	2	1.213510
chr15	75678548	75680752	75679650	ENSG00000203392.3	+	antisense	KNOWN	CTD-2026K11.6	1	1	1.213510
chr15	75723977	75727688	75725832	ENSG00000182950.2	+	protein_coding	KNOWN	ODF3L1	1	4	0.958990
chr15	75727670	75738623	75733146	ENSG00000246877.1	-	antisense	KNOWN	DNM1P35	1	3	0.868887
chr15	75737820	75763321	75750570	ENSG00000260288.3	+	processed_transcript	KNOWN	RP11-24M17.4	3	4	0.606465
chr15	75746769	75747263	75747016	ENSG00000260815.3	+	processed_pseudogene	KNOWN	RP11-24M17.3	1	1	0.844554
chr15	75759501	75762405	75760953	ENSG00000261043.3	-	lincRNA	KNOWN	RP11-24M17.6	1	1	0.388803
chr15	75762215	75762315	75762265	ENSG00000274496.1	-	miRNA	KNOWN	MIR4313	1	1	0.388803
chr15	75775553	75786898	75781225	ENSG00000187812.12	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-24M17.5	2	18	0.684567
chr15	75785134	75785354	75785244	ENSG00000241807.3	+	misc_RNA	KNOWN	RN7SL319P	1	1	0.684567
chr15	75791470	75792683	75792076	ENSG00000261820.1	-	unprocessed_pseudogene	KNOWN	DNM1P49	1	2	0.368257
chr15	75843285	75901078	75872181	ENSG00000140367.11	+	protein_coding	KNOWN	UBE2Q2	8	13	0.247399
chr15	75895040	75895302	75895171	ENSG00000266308.2	+	misc_RNA	KNOWN	RN7SL510P	1	1	0.010564
chr15	75903859	75942510	75923184	ENSG00000167196.13	+	protein_coding	KNOWN	FBXO22	9	7	0.032528
chr15	75935969	76059795	75997882	ENSG00000169752.16	-	protein_coding	KNOWN	NRG4	16	12	-0.121033
chr15	75950464	75951144	75950804	ENSG00000260685.1	-	processed_pseudogene	KNOWN	RP11-326L17.1	1	1	-0.136540
chr15	76059837	76229121	76144479	ENSG00000169758.12	+	protein_coding	KNOWN	TMEM266	5	11	0.330413
chr15	76174891	76181486	76178188	ENSG00000259422.1	-	antisense	KNOWN	RP11-593F23.1	1	3	0.658642
chr15	76215355	76311472	76263413	ENSG00000140374.15	-	protein_coding	KNOWN	ETFA	20	12	0.146339
chr15	76230048	76230390	76230219	ENSG00000196274.5	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.265330
chr15	76258986	76261690	76260338	ENSG00000259581.3	-	processed_pseudogene	KNOWN	TYRO3P	1	1	0.205202
chr15	76336724	76342476	76339600	ENSG00000159556.9	+	protein_coding	KNOWN	ISL2	3	6	0.253273
chr15	76339609	76342063	76340836	ENSG00000259514.1	-	antisense	KNOWN	RP11-685G9.2	1	3	0.253273
chr15	76343642	76344365	76344003	ENSG00000270036.1	+	lincRNA	KNOWN	RP11-685G9.4	1	1	0.253273
chr15	76347904	76905444	76626674	ENSG00000140386.12	-	protein_coding	KNOWN	SCAPER	23	32	-0.146095
chr15	76472099	76472365	76472232	ENSG00000261232.2	+	processed_pseudogene	KNOWN	RP11-331H13.1	1	1	0.151698
chr15	76586647	76586691	76586669	ENSG00000266449.1	+	miRNA	KNOWN	MIR3713	1	1	-0.158704
chr15	76736641	76736980	76736810	ENSG00000201510.1	+	misc_RNA	KNOWN	RN7SKP217	1	1	-0.093223
chr15	76931619	76954392	76943005	ENSG00000117906.13	+	protein_coding	KNOWN	RCN2	6	8	-0.041660
chr15	76976915	76977210	76977062	ENSG00000243365.3	-	misc_RNA	KNOWN	RN7SL278P	1	1	0.155495
chr15	76979245	76980451	76979848	ENSG00000259565.2	-	processed_pseudogene	KNOWN	KRT8P23	1	1	0.155495
chr15	76993359	77037332	77015345	ENSG00000140368.12	+	protein_coding	KNOWN	PSTPIP1	18	16	0.714558
chr15	77041404	77083984	77062694	ENSG00000140391.14	-	protein_coding	KNOWN	TSPAN3	10	7	0.261160
chr15	77043680	77045160	77044420	ENSG00000259652.1	+	lincRNA	KNOWN	RP11-797A18.3	1	2	0.996644
chr15	77056895	77057021	77056958	ENSG00000280730.1	+	miRNA	NOVEL	AC090181.1	1	1	0.001537
chr15	77063397	77064910	77064153	ENSG00000278991.1	-	TEC	KNOWN	RP11-797A18.5	1	1	0.001537
chr15	77067654	77068325	77067989	ENSG00000269951.1	-	sense_intronic	KNOWN	RP11-797A18.6	1	1	0.001537
chr15	77100656	77420144	77260400	ENSG00000173517.10	-	protein_coding	KNOWN	PEAK1	12	7	0.033784
chr15	77204578	77205100	77204839	ENSG00000259722.2	+	processed_pseudogene	KNOWN	RP11-94P14.1	1	2	0.286903
chr15	77278465	77278774	77278619	ENSG00000230459.3	+	processed_pseudogene	KNOWN	RP11-741G21.1	1	1	-0.041760
chr15	77420412	77485607	77453009	ENSG00000140382.14	+	protein_coding	KNOWN	HMG20A	12	11	0.103970
chr15	77484275	77485606	77484940	ENSG00000279033.1	-	TEC	KNOWN	RP11-500C12.1	1	1	-0.015537
chr15	77525540	77534110	77529825	ENSG00000259362.2	+	lincRNA	KNOWN	RP11-307C19.1	1	2	0.595622
chr15	77568970	77608888	77588929	ENSG00000259420.5	+	lincRNA	KNOWN	RP11-307C19.2	2	4	0.449618
chr15	77613027	77820900	77716963	ENSG00000169783.12	-	protein_coding	KNOWN	LINGO1	14	6	0.464564
chr15	77641764	77652288	77647026	ENSG00000259666.2	+	antisense	KNOWN	LINGO1-AS1	3	3	0.375913
chr15	77660052	77668074	77664063	ENSG00000259281.1	+	antisense	KNOWN	LINGO1-AS2	1	3	0.397551
chr15	77784610	77785070	77784840	ENSG00000280359.1	-	TEC	KNOWN	CTD-2071N1.2	1	1	0.382829
chr15	77787193	77788674	77787933	ENSG00000259213.1	+	antisense	KNOWN	CTD-2071N1.1	2	2	0.382829
chr15	77894684	77904674	77899679	ENSG00000260139.6	+	transcribed_unprocessed_pseudogene	KNOWN	CSPG4P13	2	7	0.447902
chr15	77914217	77926846	77920531	ENSG00000260776.5	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-114H24.2	4	18	0.551423
chr15	77916522	77922019	77919270	ENSG00000261244.1	+	lincRNA	KNOWN	RP11-114H24.7	1	2	0.551423
chr15	77916718	77916982	77916850	ENSG00000242066.3	-	misc_RNA	KNOWN	RN7SL214P	1	1	0.551423
chr15	77941442	77944582	77943012	ENSG00000214646.8	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-114H24.4	2	5	0.005337
chr15	77954075	77963654	77958864	ENSG00000261403.1	-	lincRNA	KNOWN	RP11-114H24.3	1	2	0.314384
chr15	77976042	77993057	77984549	ENSG00000261143.1	+	transcribed_unprocessed_pseudogene	KNOWN	ADAMTS7P3	2	15	0.458284
chr15	77984036	78077724	78030880	ENSG00000167202.11	-	protein_coding	KNOWN	TBC1D2B	12	13	0.476065
chr15	77993405	77995289	77994347	ENSG00000259792.1	+	antisense	KNOWN	RP11-114H24.6	1	3	0.825868
chr15	78038531	78038595	78038563	ENSG00000221476.1	+	miRNA	KNOWN	MIR1827	1	1	0.444565
chr15	78077808	78104909	78091358	ENSG00000183476.12	+	protein_coding	KNOWN	SH2D7	2	6	0.243790
chr15	78091172	78091297	78091234	ENSG00000199633.1	-	snoRNA	NOVEL	SNORA63	1	1	0.209687
chr15	78104606	78131544	78118075	ENSG00000136425.12	-	protein_coding	KNOWN	CIB2	9	6	0.334579
chr15	78131498	78171949	78151723	ENSG00000166411.13	+	protein_coding	KNOWN	IDH3A	24	12	0.433573
chr15	78141243	78143173	78142208	ENSG00000260988.1	+	lincRNA	KNOWN	RP11-285A1.1	1	1	0.571838
chr15	78167468	78245688	78206578	ENSG00000103740.9	-	protein_coding	KNOWN	ACSBG1	14	14	0.308143
chr15	78250502	78264156	78257329	ENSG00000259708.1	-	antisense	KNOWN	RP11-762H8.3	2	3	0.198344
chr15	78264086	78282196	78273141	ENSG00000140403.12	+	protein_coding	KNOWN	DNAJA4	12	8	0.268667
chr15	78277835	78299794	78288814	ENSG00000140395.8	-	protein_coding	KNOWN	WDR61	16	11	0.091416
chr15	78280950	78282190	78281570	ENSG00000272418.1	-	sense_intronic	KNOWN	RP11-762H8.4	1	2	0.302759
chr15	78290527	78291221	78290874	ENSG00000259562.2	-	transcribed_processed_pseudogene	KNOWN	RP11-762H8.2	1	1	-0.171043
chr15	78293286	78296049	78294667	ENSG00000259322.1	+	antisense	KNOWN	RP11-762H8.1	1	2	-0.171043
chr15	78299701	78299924	78299812	ENSG00000277482.1	+	antisense	KNOWN	RP11-762H8.5	1	1	-0.171043
chr15	78328352	78328461	78328406	ENSG00000281816.1	+	miRNA	NOVEL	AC090607.1	1	1	0.400402
chr15	78339208	78341757	78340482	ENSG00000279694.1	-	TEC	KNOWN	RP11-5O23.2	1	1	0.419919
chr15	78340324	78348230	78344277	ENSG00000166426.7	+	protein_coding	KNOWN	CRABP1	3	4	0.419919
chr15	78382573	78383155	78382864	ENSG00000259413.2	+	processed_pseudogene	KNOWN	RP11-5O23.1	1	1	0.292904
chr15	78437431	78501456	78469443	ENSG00000136381.12	+	protein_coding	KNOWN	IREB2	10	22	0.028661
chr15	78480057	78481820	78480938	ENSG00000259474.1	-	antisense	KNOWN	RP11-650L12.1	1	2	-0.325676
chr15	78507564	78537372	78522468	ENSG00000188266.13	+	protein_coding	KNOWN	HYKK	6	5	0.121420
chr15	78537681	78538946	78538313	ENSG00000279373.1	+	TEC	KNOWN	RP11-650L12.4	1	1	-0.008075
chr15	78540405	78552419	78546412	ENSG00000041357.15	+	protein_coding	KNOWN	PSMA4	21	9	-0.004249
chr15	78565520	78595269	78580394	ENSG00000169684.13	+	protein_coding	KNOWN	CHRNA5	4	6	-0.174826
chr15	78589123	78591276	78590199	ENSG00000261762.1	-	antisense	KNOWN	RP11-650L12.2	1	1	-0.317430
chr15	78593052	78621295	78607173	ENSG00000080644.15	-	protein_coding	KNOWN	CHRNA3	8	8	-0.246195
chr15	78599892	78600013	78599952	ENSG00000279421.1	-	TEC	KNOWN	RP11-335K5.3	1	1	-0.433470
chr15	78624119	78727754	78675936	ENSG00000117971.11	-	protein_coding	KNOWN	CHRNB4	6	12	0.098444
chr15	78625895	78628193	78627044	ENSG00000259555.1	+	antisense	KNOWN	RP11-335K5.2	1	2	0.034767
chr15	78660644	78735495	78698069	ENSG00000261303.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-160C18.2	5	12	0.082322
chr15	78661047	78661576	78661311	ENSG00000213307.4	-	processed_pseudogene	KNOWN	RPL18P11	1	1	0.068276
chr15	78749833	78750107	78749970	ENSG00000273512.1	-	unprocessed_pseudogene	KNOWN	RP11-160C18.5	1	1	0.312778
chr15	78752107	78753373	78752740	ENSG00000238166.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-160C18.4	2	2	0.538972
chr15	78759203	78811431	78785317	ENSG00000136378.14	-	protein_coding	KNOWN	ADAMTS7	5	24	0.568265
chr15	78810487	78898133	78854310	ENSG00000185787.14	+	protein_coding	KNOWN	MORF4L1	23	13	0.183713
chr15	78863247	78863729	78863488	ENSG00000243711.1	-	processed_pseudogene	KNOWN	RPL21P116	1	1	0.252456
chr15	78898840	78898936	78898888	ENSG00000252061.1	-	snRNA	KNOWN	RNU6-415P	1	1	-0.001118
chr15	78906127	78906809	78906468	ENSG00000279235.1	+	TEC	KNOWN	RP11-16K12.2	1	1	-0.001118
chr15	78921058	78949574	78935316	ENSG00000103811.15	-	protein_coding	KNOWN	CTSH	18	13	0.562898
chr15	78959947	79090773	79025360	ENSG00000058335.15	-	protein_coding	KNOWN	RASGRF1	9	28	0.218542
chr15	78978889	78985926	78982407	ENSG00000177699.4	+	antisense	KNOWN	RP11-16K12.1	1	2	0.279195
chr15	79114293	79114359	79114326	ENSG00000239022.1	+	miRNA	NOVEL	AC069082.1	1	1	-0.007544
chr15	79191707	79283945	79237826	ENSG00000259234.5	-	lincRNA	KNOWN	ANKRD34C-AS1	8	4	-0.181460
chr15	79209788	79209871	79209829	ENSG00000207695.1	+	miRNA	KNOWN	MIR184	1	1	0.070187
chr15	79236332	79237206	79236769	ENSG00000259419.2	+	processed_pseudogene	KNOWN	HNRNPCP3	1	1	-0.236957
chr15	79293285	79298235	79295760	ENSG00000235711.4	+	protein_coding	KNOWN	ANKRD34C	1	1	-0.500130
chr15	79311062	79427432	79369247	ENSG00000166557.12	+	protein_coding	KNOWN	TMED3	5	4	-0.029105
chr15	79338730	79338814	79338772	ENSG00000266543.1	+	miRNA	NOVEL	AC027811.1	1	1	-0.171043
chr15	79432516	79472290	79452403	ENSG00000169330.8	+	protein_coding	KNOWN	KIAA1024	2	4	0.021499
chr15	79559256	79560304	79559780	ENSG00000259493.2	-	processed_pseudogene	KNOWN	RP11-621H8.2	1	1	-0.465226
chr15	79668342	79668816	79668579	ENSG00000259208.2	-	processed_pseudogene	KNOWN	RP11-621H8.1	1	1	-0.108148
chr15	79743311	79743468	79743389	ENSG00000260674.2	+	processed_pseudogene	KNOWN	RP11-591L14.2	1	1	-0.116250
chr15	79751689	79752049	79751869	ENSG00000213527.5	-	processed_pseudogene	KNOWN	RP11-591L14.1	1	1	-0.007018
chr15	79758549	79758762	79758655	ENSG00000259229.2	-	processed_pseudogene	KNOWN	RP11-38G5.3	1	1	-0.007018
chr15	79817349	79817450	79817399	ENSG00000252995.1	-	snRNA	KNOWN	RNU6-667P	1	1	-0.203136
chr15	79832466	79833554	79833010	ENSG00000259548.1	-	lincRNA	KNOWN	RP11-38G5.2	1	2	-0.046244
chr15	79833585	79897379	79865482	ENSG00000136371.10	-	protein_coding	KNOWN	MTHFS	4	4	0.002185
chr15	79843547	79844304	79843925	ENSG00000261229.6	-	lincRNA	KNOWN	RP11-38G5.4	1	1	-0.046244
chr15	79845150	79923754	79884452	ENSG00000259332.3	-	protein_coding	KNOWN	ST20-MTHFS	3	4	-0.026782
chr15	79875920	79878179	79877049	ENSG00000279394.1	-	TEC	KNOWN	RP11-81A1.4	1	1	0.002557
chr15	79898840	79923702	79911271	ENSG00000180953.11	-	protein_coding	KNOWN	ST20	3	3	-0.120482
chr15	79920195	79922455	79921325	ENSG00000278600.1	-	sense_intronic	KNOWN	RP11-81A1.6	1	1	-0.349135
chr15	79922771	79926993	79924882	ENSG00000259642.2	+	antisense	KNOWN	ST20-AS1	2	1	-0.349135
chr15	79944498	79945578	79945038	ENSG00000259770.2	+	processed_pseudogene	KNOWN	RP11-81A1.3	1	1	0.230968
chr15	79960889	79971446	79966167	ENSG00000140379.7	-	protein_coding	KNOWN	BCL2A1	2	3	0.128654
chr15	79984151	79985724	79984937	ENSG00000271364.1	+	processed_pseudogene	KNOWN	RP11-81A1.8	1	3	-0.080993
chr15	79989905	79990606	79990255	ENSG00000279719.1	+	TEC	KNOWN	RP11-81A1.7	2	2	-0.054179
chr15	80014157	80015707	80014932	ENSG00000279705.1	+	TEC	KNOWN	RP11-758M2.1	1	1	0.041366
chr15	80057425	80057684	80057554	ENSG00000275460.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.091992
chr15	80059568	80138393	80098980	ENSG00000086666.18	+	protein_coding	KNOWN	ZFAND6	24	7	-0.054962
chr15	80152490	80186946	80169718	ENSG00000103876.11	+	protein_coding	KNOWN	FAH	13	15	0.323127
chr15	80165923	80166980	80166451	ENSG00000259967.1	+	lincRNA	KNOWN	RP11-2E17.2	1	2	0.206856
chr15	80195484	80252213	80223848	ENSG00000259417.2	-	lincRNA	KNOWN	LINC01314	1	3	0.114367
chr15	80263068	80341805	80302436	ENSG00000259361.5	-	lincRNA	KNOWN	LINC00927	4	3	0.010961
chr15	80344853	80403575	80374214	ENSG00000259495.2	-	lincRNA	KNOWN	RP11-210M15.2	2	3	-0.149565
chr15	80404350	80597937	80501143	ENSG00000172379.18	+	protein_coding	KNOWN	ARNT2	10	20	0.253665
chr15	80433795	80445152	80439473	ENSG00000258010.3	-	antisense	KNOWN	RP11-210M15.1	1	3	-0.056872
chr15	80554609	80562944	80558776	ENSG00000259175.1	-	antisense	KNOWN	RP11-379K22.2	1	3	0.129081
chr15	80580029	80580566	80580297	ENSG00000270919.1	-	antisense	KNOWN	RP11-379K22.3	1	1	0.479508
chr15	80581103	80581239	80581171	ENSG00000266542.1	+	miRNA	KNOWN	MIR5572	1	1	0.479508
chr15	80663772	80663878	80663825	ENSG00000222139.1	+	snRNA	KNOWN	RNU6-380P	1	1	0.124413
chr15	80679684	80755621	80717652	ENSG00000136379.11	+	protein_coding	KNOWN	ABHD17C	5	4	0.094438
chr15	80693216	80693707	80693461	ENSG00000271983.1	-	lincRNA	KNOWN	RP11-28H5.2	1	1	-0.028302
chr15	80779343	80951776	80865559	ENSG00000103888.15	+	protein_coding	KNOWN	CEMIP	7	30	0.349253
chr15	80841978	80842073	80842025	ENSG00000208003.1	-	miRNA	KNOWN	MIR549A	1	1	0.227556
chr15	80896190	80948867	80922528	ENSG00000259546.1	-	antisense	KNOWN	RP11-351M8.2	1	4	0.351045
chr15	80896191	80909777	80902984	ENSG00000259649.4	-	antisense	KNOWN	RP11-351M8.1	3	4	0.292016
chr15	80946289	80989878	80968083	ENSG00000117899.10	-	protein_coding	KNOWN	MESDC2	7	5	0.345952
chr15	80990804	80993258	80992031	ENSG00000260619.1	-	lincRNA	KNOWN	RP11-775C24.3	1	1	0.269185
chr15	80997417	80997473	80997445	ENSG00000265855.1	-	miRNA	KNOWN	MIR4514	1	1	0.269185
chr15	80999593	80999981	80999787	ENSG00000277782.1	-	lincRNA	KNOWN	RP11-775C24.5	1	1	0.269185
chr15	81000944	81005788	81003366	ENSG00000140406.3	+	protein_coding	KNOWN	MESDC1	1	1	0.269185
chr15	81007033	81149175	81078104	ENSG00000156206.13	+	protein_coding	KNOWN	CFAP161	3	7	0.041282
chr15	81060953	81063488	81062220	ENSG00000279834.1	+	TEC	KNOWN	RP11-775C24.4	1	1	0.322289
chr15	81117635	81118340	81117987	ENSG00000259461.1	-	processed_pseudogene	KNOWN	ANP32BP3	1	1	-0.047733
chr15	81159575	81314058	81236816	ENSG00000172349.16	+	protein_coding	KNOWN	IL16	14	20	0.074512
chr15	81303215	81309391	81306303	ENSG00000271725.1	-	3prime_overlapping_ncrna	KNOWN	RP11-761I4.4	1	2	0.223552
chr15	81309053	81324183	81316618	ENSG00000172345.13	-	protein_coding	KNOWN	STARD5	6	6	0.414540
chr15	81324377	81362037	81343207	ENSG00000259343.5	+	antisense	KNOWN	TMC3-AS1	4	5	0.270505
chr15	81331217	81374213	81352715	ENSG00000188869.12	-	protein_coding	KNOWN	TMC3	3	22	0.177687
chr15	81335577	81336119	81335848	ENSG00000273920.1	+	antisense	KNOWN	RP11-761I4.5	1	1	0.351079
chr15	81392759	81393384	81393071	ENSG00000278029.1	+	lincRNA	KNOWN	CTD-2240J17.2	1	1	0.061131
chr15	81393625	81394082	81393853	ENSG00000278448.1	+	lincRNA	KNOWN	CTD-2240J17.3	1	1	0.061131
chr15	81403026	81403570	81403298	ENSG00000275995.1	+	lincRNA	KNOWN	CTD-2240J17.4	1	1	0.061131
chr15	81410517	81419127	81414822	ENSG00000259372.2	+	lincRNA	KNOWN	CTD-2240J17.1	2	2	-0.153419
chr15	81427448	81755217	81591332	ENSG00000259543.1	+	lincRNA	KNOWN	CTD-2034I4.1	1	4	-0.404776
chr15	81554003	81696780	81625391	ENSG00000259594.5	+	lincRNA	KNOWN	CTD-2034I4.2	2	5	-0.332128
chr15	81633887	81642190	81638038	ENSG00000259610.1	-	lincRNA	KNOWN	RP11-499F3.1	1	2	-0.272772
chr15	81660482	81871125	81765803	ENSG00000259692.5	-	lincRNA	KNOWN	RP11-499F3.2	2	3	-0.319652
chr15	81953303	81995666	81974484	ENSG00000259445.1	-	lincRNA	KNOWN	RP11-276M12.1	1	3	0.132665
chr15	82010212	82010607	82010409	ENSG00000259622.1	-	processed_pseudogene	KNOWN	RP11-597K23.1	1	1	-0.364724
chr15	82041778	82046141	82043959	ENSG00000183496.5	-	protein_coding	KNOWN	MEX3B	2	2	-0.102656
chr15	82044294	82044376	82044335	ENSG00000222521.1	+	miRNA	NOVEL	AC026956.1	1	1	-0.102656
chr15	82088594	82097694	82093144	ENSG00000259518.1	+	lincRNA	KNOWN	LINC01583	3	6	0.126397
chr15	82130230	82262763	82196496	ENSG00000140598.13	-	protein_coding	KNOWN	EFTUD1	10	20	0.021020
chr15	82174224	82174385	82174304	ENSG00000212170.1	-	snRNA	KNOWN	RNU1-77P	1	1	-0.039605
chr15	82262810	82284930	82273870	ENSG00000188659.9	+	protein_coding	KNOWN	SAXO2	8	4	-0.101756
chr15	82298553	82334609	82316581	ENSG00000274376.4	+	transcribed_unprocessed_pseudogene	KNOWN	ADAMTS7P1	3	20	0.423698
chr15	82339998	82349475	82344736	ENSG00000278662.4	-	protein_coding	KNOWN	GOLGA6L10	4	11	0.527788
chr15	82355142	82420075	82387608	ENSG00000259429.5	+	transcribed_unprocessed_pseudogene	KNOWN	UBE2Q2P2	4	8	0.244103
chr15	82372196	82372912	82372554	ENSG00000237550.5	-	transcribed_processed_pseudogene	KNOWN	RPL9P9	2	2	0.179939
chr15	82418651	82434235	82426443	ENSG00000278202.1	+	processed_transcript	KNOWN	RP11-152F13.8	1	7	0.165197
chr15	82430018	82439153	82434585	ENSG00000197978.9	+	protein_coding	KNOWN	GOLGA6L9	3	9	0.206249
chr15	82445719	82454837	82450278	ENSG00000275695.1	+	transcribed_unprocessed_pseudogene	KNOWN	UBE2Q2P6	2	3	0.561116
chr15	82459472	82477258	82468365	ENSG00000276710.4	+	transcribed_unprocessed_pseudogene	KNOWN	CSPG4P10	2	12	0.806732
chr15	82472203	82472426	82472314	ENSG00000278603.1	+	unprocessed_pseudogene	KNOWN	RP13-608F4.5	1	1	0.707651
chr15	82472993	82513950	82493471	ENSG00000255769.7	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P10	6	8	0.309786
chr15	82477123	82477206	82477164	ENSG00000221095.1	-	miRNA	NOVEL	AC245033.1	1	1	0.707651
chr15	82519590	82526412	82523001	ENSG00000277741.4	+	transcribed_unprocessed_pseudogene	KNOWN	GOLGA6L17P	2	7	0.317284
chr15	82531653	82534139	82532896	ENSG00000259637.1	-	unprocessed_pseudogene	KNOWN	DNM1P38	1	3	0.203783
chr15	82536753	82540564	82538658	ENSG00000182774.10	-	protein_coding	KNOWN	RPS17	10	6	0.203783
chr15	82540032	82555932	82547982	ENSG00000260836.1	-	protein_coding	KNOWN	RP11-152F13.10	1	8	0.257236
chr15	82540870	82562374	82551622	ENSG00000278013.1	+	lincRNA	KNOWN	RP11-379H8.1	1	3	0.286220
chr15	82543201	82648861	82596031	ENSG00000214575.9	-	protein_coding	KNOWN	CPEB1	18	13	0.014077
chr15	82647770	82692820	82670295	ENSG00000259462.2	+	antisense	KNOWN	CPEB1-AS1	2	4	0.232507
chr15	82659281	82709914	82684597	ENSG00000103723.12	-	protein_coding	KNOWN	AP3B2	15	27	0.257076
chr15	82691723	82692358	82692040	ENSG00000259707.1	-	processed_pseudogene	KNOWN	RP11-752G15.4	1	1	0.199572
chr15	82710471	82714026	82712248	ENSG00000228141.6	-	lincRNA	KNOWN	AC105339.1	3	4	0.202491
chr15	82725873	82738904	82732388	ENSG00000259315.1	-	transcribed_processed_pseudogene	KNOWN	ACTG1P17	3	2	0.083154
chr15	82726550	82726633	82726591	ENSG00000266697.1	-	miRNA	NOVEL	AC105339.2	1	1	0.202491
chr15	82738386	82739122	82738754	ENSG00000279758.1	+	TEC	KNOWN	RP11-752G15.10	1	1	0.027861
chr15	82744223	82750289	82747256	ENSG00000259442.1	+	antisense	KNOWN	RP11-752G15.8	1	2	0.034045
chr15	82750564	82757206	82753885	ENSG00000250988.7	+	antisense	KNOWN	SNHG21	5	5	0.157209
chr15	82752884	82757208	82755046	ENSG00000252690.3	+	processed_transcript	KNOWN	SCARNA15	1	1	0.157209
chr15	82755362	82806070	82780716	ENSG00000186628.12	-	protein_coding	KNOWN	FSD2	3	13	0.041073
chr15	82755945	82756071	82756008	ENSG00000277864.1	+	scaRNA	KNOWN	SCARNA15	1	1	0.157209
chr15	82756006	82756069	82756037	ENSG00000280933.1	+	miRNA	NOVEL	AC105339.3	1	1	0.157209
chr15	82809628	82836108	82822868	ENSG00000156232.7	+	protein_coding	KNOWN	WHAMM	2	10	0.010265
chr15	82836946	82986153	82911549	ENSG00000103942.12	-	protein_coding	KNOWN	HOMER2	10	9	0.089382
chr15	82847870	82847998	82847934	ENSG00000280753.1	-	miRNA	NOVEL	AC044907.1	1	1	-0.116595
chr15	82925884	83103443	83014663	ENSG00000259805.1	+	antisense	KNOWN	RP11-382A20.5	1	2	0.079777
chr15	82986207	82991057	82988632	ENSG00000169612.3	+	protein_coding	KNOWN	FAM103A1	1	4	0.304879
chr15	82988441	83011641	83000041	ENSG00000169609.13	-	protein_coding	KNOWN	C15orf40	12	5	0.135818
chr15	83012661	83061845	83037253	ENSG00000260608.1	+	antisense	KNOWN	RP11-382A20.7	1	2	0.044068
chr15	83016422	83067354	83041888	ENSG00000064726.9	-	protein_coding	KNOWN	BTBD1	5	8	0.036659
chr15	83020115	83020802	83020458	ENSG00000273747.1	+	antisense	KNOWN	RP11-90B9.3	1	1	-0.008037
chr15	83022236	83024336	83023286	ENSG00000259767.1	-	sense_intronic	KNOWN	RP11-90B9.2	1	2	-0.008037
chr15	83022571	83090782	83056676	ENSG00000260351.1	+	antisense	KNOWN	RP11-382A20.6	1	2	0.053492
chr15	83044368	83044771	83044569	ENSG00000259308.3	+	processed_pseudogene	KNOWN	RP11-382A20.1	1	1	0.150885
chr15	83067335	83067415	83067375	ENSG00000263643.1	+	miRNA	KNOWN	MIR4515	1	1	-0.060011
chr15	83107407	83144854	83126130	ENSG00000136404.15	+	protein_coding	KNOWN	TM6SF1	8	10	0.123929
chr15	83112738	83208018	83160378	ENSG00000166503.8	-	protein_coding	KNOWN	RP11-382A20.3	6	7	0.057523
chr15	83113617	83114566	83114091	ENSG00000260579.1	-	antisense	KNOWN	RP11-382A20.2	1	2	0.191002
chr15	83179182	83439445	83309313	ENSG00000259986.1	+	antisense	KNOWN	RP11-382A20.4	3	4	-0.085654
chr15	83255903	83284716	83270309	ENSG00000169594.12	-	protein_coding	KNOWN	BNC1	3	7	-0.033517
chr15	83447228	83618743	83532985	ENSG00000140600.16	+	protein_coding	KNOWN	SH3GL3	6	12	-0.203577
chr15	83616186	83616258	83616222	ENSG00000223180.1	+	miRNA	NOVEL	AC087738.1	1	1	-0.200790
chr15	83654086	84039842	83846964	ENSG00000156218.12	+	protein_coding	KNOWN	ADAMTSL3	8	30	-0.339293
chr15	83717427	83717522	83717474	ENSG00000212374.1	+	snRNA	KNOWN	RNU6-401P	1	1	-0.469887
chr15	83739784	83740199	83739991	ENSG00000261665.2	+	transcribed_processed_pseudogene	KNOWN	TUBAP4	1	1	-0.434756
chr15	83824863	83824953	83824908	ENSG00000200444.1	-	snRNA	KNOWN	RNU6-1339P	1	1	-0.340533
chr15	83962176	83962583	83962379	ENSG00000274128.1	+	sense_intronic	KNOWN	RP11-342A23.2	1	1	-0.333099
chr15	84053113	84080097	84066605	ENSG00000259609.1	-	unprocessed_pseudogene	KNOWN	RP11-342A23.1	1	2	-0.262867
chr15	84080168	84126604	84103386	ENSG00000259404.5	+	transcribed_unprocessed_pseudogene	KNOWN	EFTUD1P1	4	14	-0.385366
chr15	84166547	84169896	84168221	ENSG00000280038.1	-	TEC	KNOWN	DNM1P41	1	1	0.153067
chr15	84171178	84173194	84172186	ENSG00000259694.1	-	lincRNA	KNOWN	RP13-262C2.3	1	2	0.083580
chr15	84172490	84182234	84177362	ENSG00000259511.1	+	protein_coding	KNOWN	UBE2Q2L	1	3	0.083580
chr15	84186752	84197384	84192068	ENSG00000259726.1	+	unprocessed_pseudogene	KNOWN	CSPG4P11	1	7	0.427706
chr15	84199311	84230136	84214723	ENSG00000225151.10	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P7	10	7	0.578953
chr15	84204516	84204599	84204557	ENSG00000221008.1	-	miRNA	NOVEL	AC136698.1	1	1	0.579009
chr15	84205454	84205700	84205577	ENSG00000278422.1	-	misc_RNA	KNOWN	RN7SL331P	1	1	0.579009
chr15	84235773	84245368	84240570	ENSG00000184206.11	+	protein_coding	KNOWN	GOLGA6L4	5	11	0.083580
chr15	84255913	84256014	84255963	ENSG00000259633.1	+	unprocessed_pseudogene	KNOWN	UBE2Q2P8	1	1	0.271161
chr15	84389729	84395903	84392816	ENSG00000259683.1	+	unprocessed_pseudogene	KNOWN	RP11-182J1.14	1	9	0.373513
chr15	84394072	84394336	84394204	ENSG00000244056.3	+	misc_RNA	KNOWN	RN7SL417P	1	1	0.381498
chr15	84394512	84395514	84395013	ENSG00000259570.1	+	unprocessed_pseudogene	KNOWN	RP11-671M22.4	1	4	0.381498
chr15	84395179	84395262	84395220	ENSG00000221247.1	+	miRNA	NOVEL	AC243562.1	1	1	0.381498
chr15	84398316	84411701	84405008	ENSG00000235370.6	-	transcribed_unprocessed_pseudogene	KNOWN	DNM1P51	2	3	0.388209
chr15	84401807	84408005	84404906	ENSG00000272887.1	-	transcribed_unprocessed_pseudogene	KNOWN	CSPG4P5	1	3	0.381498
chr15	84412773	84421837	84417305	ENSG00000259538.1	-	transcribed_unprocessed_pseudogene	KNOWN	UBE2Q2P11	1	2	0.434273
chr15	84422618	84425882	84424250	ENSG00000259774.1	+	lincRNA	KNOWN	RP11-182J1.13	1	4	0.434273
chr15	84467901	84468147	84468024	ENSG00000278785.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.166760
chr15	84468965	84469048	84469006	ENSG00000273531.1	+	miRNA	NOVEL	AC243562.2	1	1	0.166760
chr15	84491480	84500599	84496039	ENSG00000197627.3	-	unprocessed_pseudogene	KNOWN	UBE2Q2P12	1	2	0.502338
chr15	84500378	84502381	84501379	ENSG00000259551.1	+	lincRNA	KNOWN	RP11-182J1.10	1	2	0.502338
chr15	84505463	84505495	84505479	ENSG00000259302.1	+	unprocessed_pseudogene	KNOWN	RP11-182J1.11	1	1	0.502338
chr15	84507885	84516814	84512349	ENSG00000230373.8	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA6L5P	3	9	0.467726
chr15	84513241	84526949	84520095	ENSG00000259244.1	-	processed_transcript	KNOWN	RP11-182J1.12	1	5	0.456989
chr15	84526781	84571216	84548998	ENSG00000189136.8	-	transcribed_unprocessed_pseudogene	KNOWN	UBE2Q2P1	7	10	0.035897
chr15	84570649	84580175	84575412	ENSG00000259728.5	+	transcribed_unprocessed_pseudogene	KNOWN	LINC00933	5	3	0.253743
chr15	84599434	84606463	84602948	ENSG00000275120.1	-	antisense	KNOWN	RP11-182J1.17	1	3	0.542244
chr15	84600986	84627796	84614391	ENSG00000176371.13	+	protein_coding	KNOWN	ZSCAN2	15	4	0.498945
chr15	84611689	84614969	84613329	ENSG00000256278.1	-	antisense	KNOWN	RP11-182J1.5	1	2	0.477017
chr15	84622015	84623237	84622626	ENSG00000276278.1	-	antisense	KNOWN	RP11-182J1.3	1	1	0.477017
chr15	84631451	84647478	84639464	ENSG00000176700.19	+	transcribed_unprocessed_pseudogene	KNOWN	SCAND2P	9	5	0.711568
chr15	84631898	84633987	84632942	ENSG00000254414.1	-	antisense	KNOWN	RP11-182J1.1	1	2	0.711568
chr15	84633874	84634635	84634254	ENSG00000254779.4	+	transcribed_processed_pseudogene	KNOWN	EGLN1P1	1	1	0.711568
chr15	84639281	84654343	84646812	ENSG00000177082.12	-	protein_coding	KNOWN	WDR73	21	8	0.744934
chr15	84642487	84642763	84642625	ENSG00000277578.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.711568
chr15	84655129	84658563	84656846	ENSG00000197696.9	-	protein_coding	KNOWN	NMB	2	3	0.827259
chr15	84669538	84716716	84693127	ENSG00000140612.13	-	protein_coding	KNOWN	SEC11A	10	7	0.445928
chr15	84685884	84686946	84686415	ENSG00000259654.1	+	antisense	KNOWN	RP11-245C17.2	1	2	0.617819
chr15	84748635	84806432	84777533	ENSG00000166716.9	+	protein_coding	KNOWN	ZNF592	4	11	0.372280
chr15	84753122	84754502	84753812	ENSG00000259415.1	+	sense_intronic	KNOWN	RP11-7M10.2	1	2	0.415733
chr15	84816680	84873482	84845081	ENSG00000136383.6	+	protein_coding	KNOWN	ALPK3	2	14	0.341535
chr15	84852498	84852615	84852556	ENSG00000200991.1	-	snoRNA	NOVEL	SNORA25	1	1	0.224186
chr15	84884654	84945796	84915225	ENSG00000156222.11	+	protein_coding	KNOWN	SLC28A1	4	19	0.591417
chr15	84938416	84938522	84938469	ENSG00000207037.1	-	snRNA	KNOWN	RNU6-339P	1	1	0.434725
chr15	84939617	84939723	84939670	ENSG00000212388.1	-	snRNA	KNOWN	RNU6-796P	1	1	0.434725
chr15	84940504	84941133	84940818	ENSG00000271044.1	-	processed_pseudogene	KNOWN	RP11-255M6.1	1	1	0.434725
chr15	84980440	85139145	85059792	ENSG00000073417.14	+	protein_coding	KNOWN	PDE8A	16	23	0.172198
chr15	85178628	85178806	85178717	ENSG00000259270.1	-	processed_pseudogene	KNOWN	RP11-561C5.1	1	1	0.142115
chr15	85181210	85182083	85181646	ENSG00000259449.1	-	processed_pseudogene	KNOWN	NIFKP8	1	1	0.142115
chr15	85191438	85213905	85202671	ENSG00000259295.6	+	transcribed_unprocessed_pseudogene	KNOWN	CSPG4P12	2	8	0.512900
chr15	85205440	85234795	85220117	ENSG00000229212.7	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-561C5.4	5	6	0.504259
chr15	85209115	85209198	85209156	ENSG00000221266.1	-	miRNA	NOVEL	AC044860.1	1	1	0.493888
chr15	85210053	85210299	85210176	ENSG00000277582.1	-	misc_RNA	KNOWN	RN7SL428P	1	1	0.603245
chr15	85240472	85247170	85243821	ENSG00000188388.10	+	unprocessed_pseudogene	KNOWN	GOLGA6L3	1	9	0.101330
chr15	85255369	85330334	85292851	ENSG00000218052.5	-	transcribed_unprocessed_pseudogene	KNOWN	ADAMTS7P4	6	13	0.454674
chr15	85272527	85272974	85272750	ENSG00000259317.1	+	unprocessed_pseudogene	KNOWN	RP11-561C5.7	1	2	0.652292
chr15	85380571	85749358	85564964	ENSG00000170776.19	+	protein_coding	KNOWN	AKAP13	24	37	0.056301
chr15	85380596	85380662	85380629	ENSG00000276648.1	+	miRNA	KNOWN	MIR7706	1	1	-0.032860
chr15	85389823	85389884	85389853	ENSG00000251891.1	-	snRNA	KNOWN	RNU7-79P	1	1	-0.032860
chr15	85415228	85415633	85415430	ENSG00000259630.2	+	transcribed_processed_pseudogene	KNOWN	CTD-2262B20.1	1	1	0.091992
chr15	85579046	85580178	85579612	ENSG00000259375.1	-	antisense	KNOWN	RP11-815J21.2	1	2	0.299505
chr15	85619623	85670948	85645285	ENSG00000259367.1	-	antisense	KNOWN	RP11-815J21.4	1	2	-0.009739
chr15	85621264	85627689	85624476	ENSG00000259276.1	-	antisense	KNOWN	RP11-815J21.3	1	3	0.115839
chr15	85651522	85651628	85651575	ENSG00000202081.1	-	snRNA	KNOWN	RNU6-1280P	1	1	0.135319
chr15	85701109	85702771	85701940	ENSG00000259453.1	+	sense_intronic	KNOWN	RP11-815J21.1	1	2	-0.185542
chr15	85726115	85727227	85726671	ENSG00000259544.1	-	antisense	KNOWN	RP11-158M2.2	1	2	0.099985
chr15	85744109	85750281	85747195	ENSG00000259407.1	-	antisense	KNOWN	RP11-158M2.3	1	3	0.201596
chr15	85750336	85752901	85751618	ENSG00000259762.1	-	antisense	KNOWN	RP11-158M2.4	1	2	0.524951
chr15	85754941	85756237	85755589	ENSG00000259416.2	-	antisense	KNOWN	RP11-158M2.5	1	3	0.524951
chr15	85759323	85795030	85777176	ENSG00000183655.12	-	protein_coding	KNOWN	KLHL25	3	3	0.634415
chr15	85770496	85770578	85770537	ENSG00000221634.1	-	miRNA	KNOWN	MIR1276	1	1	0.733761
chr15	85770990	85771163	85771076	ENSG00000259195.1	+	processed_pseudogene	KNOWN	RP11-158M2.6	1	1	0.733761
chr15	85821855	85821957	85821906	ENSG00000252931.1	+	snRNA	KNOWN	RNU6-231P	1	1	-0.171043
chr15	85825635	85825730	85825682	ENSG00000264406.1	+	miRNA	KNOWN	MIR548AP	1	1	-0.171043
chr15	85958717	85958971	85958844	ENSG00000259608.1	-	processed_pseudogene	KNOWN	RP11-23A22.1	1	1	-0.197515
chr15	86078743	86079792	86079267	ENSG00000260758.1	-	lincRNA	KNOWN	RP11-553E24.3	1	2	-0.195811
chr15	86083345	86116717	86100031	ENSG00000260477.6	-	lincRNA	KNOWN	LINC01584	4	6	-0.177193
chr15	86138269	86138379	86138324	ENSG00000252964.1	-	rRNA	KNOWN	RNA5SP400	1	1	-0.149766
chr15	86139838	86140240	86140039	ENSG00000261077.1	-	processed_pseudogene	KNOWN	RP11-553E24.1	1	1	-0.149766
chr15	86141996	87029052	86585524	ENSG00000166748.12	+	protein_coding	KNOWN	AGBL1	4	24	-0.329944
chr15	86173198	86173270	86173234	ENSG00000200206.1	-	snoRNA	NOVEL	SNORD74	1	1	-0.169336
chr15	86295649	86317173	86306411	ENSG00000260125.1	-	antisense	KNOWN	AGBL1-AS1	3	4	-0.376733
chr15	86630266	86631136	86630701	ENSG00000259734.1	-	antisense	KNOWN	RP11-182L7.1	1	2	-0.178097
chr15	86914443	86916155	86915299	ENSG00000273540.1	+	sense_intronic	KNOWN	RP11-133L19.3	1	1	-0.195171
chr15	86931559	86931652	86931605	ENSG00000281239.1	-	miRNA	NOVEL	AC016987.1	1	1	-0.199348
chr15	86932880	86946331	86939605	ENSG00000259636.1	+	sense_intronic	KNOWN	RP11-133L19.2	1	3	-0.199348
chr15	86938797	86988426	86963611	ENSG00000259620.1	-	antisense	KNOWN	RP11-133L19.1	1	3	-0.354201
chr15	87042054	87047161	87044607	ENSG00000259761.1	+	lincRNA	KNOWN	RP11-138H10.2	1	2	-0.244057
chr15	87432058	87703852	87567955	ENSG00000259560.1	-	lincRNA	KNOWN	RP11-648K4.2	1	6	-0.233257
chr15	87474183	87474289	87474236	ENSG00000207150.1	-	snRNA	KNOWN	RNU6-185P	1	1	-0.625278
chr15	87576929	87579866	87578397	ENSG00000259527.2	+	lincRNA	KNOWN	LINC00052	1	3	-0.141207
chr15	87859751	88256768	88058259	ENSG00000140538.16	-	protein_coding	KNOWN	NTRK3	21	20	-0.042916
chr15	88143935	88144165	88144050	ENSG00000259183.1	-	processed_pseudogene	KNOWN	MED28P6	1	1	-0.054327
chr15	88252730	88271066	88261898	ENSG00000260305.1	+	lincRNA	KNOWN	NTRK3-AS1	1	4	0.317831
chr15	88459476	88467419	88463447	ENSG00000259494.1	-	protein_coding	KNOWN	MRPL46	5	4	0.099769
chr15	88459717	88512529	88486123	ENSG00000173867.8	-	processed_transcript	KNOWN	RP11-97O12.7	2	4	0.229601
chr15	88467453	88480773	88474113	ENSG00000181991.15	+	protein_coding	KNOWN	MRPS11	11	6	0.170317
chr15	88477871	88478387	88478129	ENSG00000279945.1	-	TEC	KNOWN	RP11-97O12.5	1	1	0.186988
chr15	88501944	88505787	88503865	ENSG00000271997.1	-	sense_intronic	KNOWN	RP11-97O12.6	1	1	0.363294
chr15	88511559	88546675	88529117	ENSG00000140543.13	-	protein_coding	KNOWN	DET1	7	7	0.187373
chr15	88568287	88568562	88568424	ENSG00000259569.2	+	processed_pseudogene	KNOWN	RP11-97O12.3	1	1	0.007779
chr15	88585566	88605110	88595338	ENSG00000249487.6	-	lincRNA	KNOWN	LINC01586	3	3	-0.143078
chr15	88608101	88608211	88608156	ENSG00000221630.2	+	miRNA	KNOWN	MIR1179	1	1	-0.163847
chr15	88611825	88611934	88611879	ENSG00000207703.1	+	miRNA	KNOWN	MIR7-2	1	1	0.037025
chr15	88621296	88632282	88626789	ENSG00000181026.14	+	protein_coding	KNOWN	AEN	6	4	0.181143
chr15	88636153	88656483	88646318	ENSG00000172183.14	+	protein_coding	KNOWN	ISG20	11	4	0.692833
chr15	88797413	88798734	88798073	ENSG00000259676.1	-	lincRNA	KNOWN	RP11-343B18.2	1	2	0.380822
chr15	88803443	88875354	88839398	ENSG00000157766.15	+	protein_coding	KNOWN	ACAN	9	18	0.741513
chr15	88877288	88895626	88886457	ENSG00000140511.11	-	protein_coding	KNOWN	HAPLN3	5	6	0.695886
chr15	88898683	88913411	88906047	ENSG00000140545.14	-	protein_coding	KNOWN	MFGE8	17	9	0.932947
chr15	88952683	88953460	88953071	ENSG00000259350.2	+	processed_pseudogene	KNOWN	RP11-63A23.2	1	2	0.355026
chr15	88960070	88961046	88960558	ENSG00000259489.2	+	processed_pseudogene	KNOWN	KRT18P47	1	1	0.355026
chr15	88972401	88972452	88972426	ENSG00000265866.1	-	miRNA	NOVEL	AC067805.1	1	1	0.423401
chr15	88989519	88990245	88989882	ENSG00000261549.2	-	processed_pseudogene	KNOWN	RP11-320A16.1	1	1	0.474837
chr15	89037977	89038286	89038131	ENSG00000260275.1	-	processed_pseudogene	KNOWN	RP11-326A19.2	1	1	0.313348
chr15	89041223	89082819	89062021	ENSG00000260123.1	+	lincRNA	KNOWN	RP11-326A19.4	1	4	0.411890
chr15	89087078	89088267	89087672	ENSG00000261407.1	-	antisense	KNOWN	RP11-326A19.3	2	2	0.670776
chr15	89087459	89202360	89144909	ENSG00000140526.16	+	protein_coding	KNOWN	ABHD2	11	15	0.386279
chr15	89120779	89120840	89120809	ENSG00000239151.1	+	snRNA	KNOWN	RNU7-195P	1	1	0.450292
chr15	89135547	89136495	89136021	ENSG00000259699.2	-	processed_pseudogene	KNOWN	HMGB1P8	1	1	0.077985
chr15	89201091	89201768	89201429	ENSG00000259948.2	-	processed_pseudogene	KNOWN	RP11-326A19.5	1	1	0.529524
chr15	89209869	89221751	89215810	ENSG00000140522.11	-	protein_coding	KNOWN	RLBP1	4	9	0.654510
chr15	89243949	89317261	89280605	ENSG00000140525.17	+	protein_coding	KNOWN	FANCI	17	38	0.357369
chr15	89316305	89334861	89325583	ENSG00000140521.11	-	protein_coding	KNOWN	POLG	13	24	0.594386
chr15	89326739	89326810	89326774	ENSG00000275101.1	-	miRNA	KNOWN	MIR6766	1	1	0.492079
chr15	89335053	89336161	89335607	ENSG00000261441.1	+	antisense	KNOWN	RP11-217B1.2	2	2	0.882538
chr15	89358841	89360377	89359609	ENSG00000279708.1	+	TEC	KNOWN	CTD-2335A18.2	1	1	0.694844
chr15	89361579	89398487	89380033	ENSG00000255571.6	+	lincRNA	KNOWN	MIR9-3HG	12	7	0.700580
chr15	89368017	89368106	89368061	ENSG00000207819.1	+	miRNA	KNOWN	MIR9-3	1	1	0.694844
chr15	89471398	89496613	89484005	ENSG00000140519.12	-	protein_coding	KNOWN	RHCG	6	11	0.666870
chr15	89505277	89524034	89514655	ENSG00000259218.5	-	lincRNA	KNOWN	LINC00928	4	4	0.465465
chr15	89508961	89510416	89509688	ENSG00000261478.1	+	lincRNA	KNOWN	RP11-429B14.4	1	1	0.627341
chr15	89518523	89591956	89555239	ENSG00000259713.1	+	sense_overlapping	KNOWN	RP11-429B14.1	1	2	0.360521
chr15	89575482	89631056	89603269	ENSG00000140534.13	+	protein_coding	KNOWN	TICRR	3	22	0.377468
chr15	89579765	89582297	89581031	ENSG00000259615.1	-	antisense	KNOWN	RP11-429B14.3	1	2	0.371566
chr15	89608789	89655451	89632120	ENSG00000166813.14	-	protein_coding	KNOWN	KIF7	3	19	0.582983
chr15	89664365	89679427	89671896	ENSG00000166819.11	-	protein_coding	KNOWN	PLIN1	4	9	0.944065
chr15	89677764	89690783	89684273	ENSG00000166821.8	-	protein_coding	KNOWN	PEX11A	5	3	0.880407
chr15	89687937	89688243	89688090	ENSG00000241362.2	-	processed_pseudogene	KNOWN	RPL36AP43	1	1	0.905579
chr15	89690797	89743638	89717217	ENSG00000140527.14	+	protein_coding	KNOWN	WDR93	5	17	0.281517
chr15	89704665	89705415	89705040	ENSG00000259561.1	+	sense_intronic	KNOWN	RP11-300G22.2	1	2	0.487577
chr15	89714232	89714338	89714285	ENSG00000206590.1	+	snRNA	KNOWN	RNU6-132P	1	1	0.022729
chr15	89748661	89751310	89749985	ENSG00000166823.5	-	protein_coding	KNOWN	MESP1	2	2	0.594393
chr15	89752296	89753493	89752894	ENSG00000259441.2	+	processed_pseudogene	KNOWN	MRPL15P1	1	2	0.822495
chr15	89760591	89778754	89769672	ENSG00000188095.4	+	protein_coding	KNOWN	MESP2	3	3	0.761152
chr15	89784889	89815401	89800145	ENSG00000166825.13	-	protein_coding	KNOWN	ANPEP	9	21	1.029453
chr15	89830599	89894638	89862618	ENSG00000157823.16	-	protein_coding	KNOWN	AP3S2	16	7	0.717327
chr15	89834308	89912882	89873595	ENSG00000250021.7	-	protein_coding	KNOWN	C15orf38-AP3S2	4	10	0.629925
chr15	89850637	89850721	89850679	ENSG00000264966.1	-	miRNA	KNOWN	MIR5094	1	1	0.730104
chr15	89876540	89877285	89876912	ENSG00000259677.1	+	processed_pseudogene	KNOWN	RP11-493E3.1	1	1	0.510821
chr15	89883931	89884030	89883980	ENSG00000264796.1	-	miRNA	KNOWN	MIR5009	1	1	0.510821
chr15	89886485	89886591	89886538	ENSG00000212420.1	-	snRNA	KNOWN	RNU6-1111P	1	1	0.510821
chr15	89895006	89912956	89903981	ENSG00000242498.7	-	protein_coding	KNOWN	ARPIN	3	6	0.400990
chr15	89897576	89897637	89897606	ENSG00000252645.1	+	snRNA	KNOWN	RNU7-111P	1	1	0.355026
chr15	89936492	89937005	89936748	ENSG00000259273.1	+	processed_pseudogene	KNOWN	RP11-493E3.2	1	1	0.376969
chr15	89950760	89951345	89951052	ENSG00000280377.1	+	TEC	KNOWN	RP11-493E3.3	1	1	0.567629
chr15	90001392	90082206	90041799	ENSG00000140548.9	+	protein_coding	KNOWN	ZNF710	5	5	0.738295
chr15	90006755	90006841	90006798	ENSG00000265871.1	+	miRNA	KNOWN	MIR3174	1	1	0.211952
chr15	90024955	90026003	90025479	ENSG00000273691.1	+	sense_intronic	KNOWN	RP11-617F23.2	1	1	0.715271
chr15	90074512	90082207	90078359	ENSG00000259291.2	-	antisense	KNOWN	RP11-617F23.1	2	2	0.915114
chr15	90076424	90076486	90076455	ENSG00000276376.1	+	snRNA	NOVEL	U7	1	1	0.915114
chr15	90083045	90102504	90092774	ENSG00000182054.9	-	protein_coding	KNOWN	IDH2	4	11	0.728522
chr15	90102649	90133445	90118047	ENSG00000259685.2	+	lincRNA	KNOWN	CTD-2315E11.1	1	4	0.644108
chr15	90160604	90229679	90195141	ENSG00000185033.14	+	protein_coding	KNOWN	SEMA4B	20	15	0.689805
chr15	90166233	90166526	90166379	ENSG00000240470.3	+	misc_RNA	KNOWN	RN7SL346P	1	1	0.582176
chr15	90206572	90206967	90206769	ENSG00000225193.5	+	transcribed_processed_pseudogene	KNOWN	RPS12P26	1	1	0.731816
chr15	90229975	90234047	90232011	ENSG00000185043.10	-	protein_coding	KNOWN	CIB1	2	7	0.985370
chr15	90233808	90245811	90239809	ENSG00000183208.12	+	protein_coding	KNOWN	GDPGP1	5	5	0.987403
chr15	90249530	90265482	90257506	ENSG00000213471.8	+	unitary_pseudogene	KNOWN	TTLL13P	5	15	0.713995
chr15	90249556	90272208	90260882	ENSG00000261147.1	+	protein_coding	KNOWN	RP11-697E2.6	1	13	0.693238
chr15	90265659	90278141	90271900	ENSG00000182768.8	+	protein_coding	KNOWN	NGRN	3	3	0.585422
chr15	90266317	90314499	90290408	ENSG00000275674.1	+	protein_coding	KNOWN	RP11-697E2.12	1	4	0.474617
chr15	90275129	90275716	90275422	ENSG00000228998.4	+	transcribed_processed_pseudogene	KNOWN	RP11-697E2.7	1	1	0.521303
chr15	90281848	90282031	90281939	ENSG00000270322.1	-	unprocessed_pseudogene	KNOWN	RP11-697E2.10	1	1	0.521303
chr15	90281858	90282270	90282064	ENSG00000275345.1	+	lincRNA	KNOWN	RP11-697E2.11	1	1	0.521303
chr15	90284376	90285580	90284978	ENSG00000271396.1	-	processed_pseudogene	KNOWN	RP11-697E2.9	1	2	0.521303
chr15	90291962	90295683	90293822	ENSG00000214433.4	+	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P8	1	6	0.415606
chr15	90293939	90294207	90294073	ENSG00000275803.1	+	misc_RNA	KNOWN	RN7SL736P	1	1	0.415606
chr15	90294059	90294142	90294100	ENSG00000280965.1	+	miRNA	NOVEL	AC091167.2	1	1	0.415606
chr15	90295041	90295123	90295082	ENSG00000221309.1	+	miRNA	NOVEL	AC091167.1	1	1	0.415606
chr15	90347587	90349437	90348512	ENSG00000279980.1	+	TEC	KNOWN	GABARAPL3	1	1	0.451779
chr15	90348844	90349197	90349020	ENSG00000238244.3	-	processed_pseudogene	KNOWN	GABARAPL3	1	1	0.451779
chr15	90352245	90369146	90360695	ENSG00000196391.10	+	protein_coding	KNOWN	ZNF774	5	5	0.376360
chr15	90385814	90386063	90385938	ENSG00000259262.1	+	processed_pseudogene	KNOWN	NDUFA3P4	1	1	0.349643
chr15	90388218	90502243	90445230	ENSG00000140575.12	+	protein_coding	KNOWN	IQGAP1	18	39	0.346414
chr15	90393490	90397881	90395685	ENSG00000259177.1	-	antisense	KNOWN	RP11-154B12.3	1	2	0.441227
chr15	90529925	90645345	90587635	ENSG00000140577.15	+	protein_coding	KNOWN	CRTC3	14	15	0.506565
chr15	90595840	90596447	90596143	ENSG00000259212.1	-	antisense	KNOWN	CTD-3065B20.2	1	2	0.457863
chr15	90604225	90614558	90609391	ENSG00000259314.1	-	antisense	KNOWN	CTD-3065B20.3	1	3	0.481470
chr15	90620007	90717141	90668574	ENSG00000259736.1	-	antisense	KNOWN	CRTC3-AS1	2	4	0.519404
chr15	90634725	90635033	90634879	ENSG00000259746.1	+	processed_pseudogene	KNOWN	HSPE1P3	1	1	0.464718
chr15	90650631	90651103	90650867	ENSG00000278370.1	+	lincRNA	KNOWN	RP11-387D10.4	1	1	0.521676
chr15	90660234	90664967	90662600	ENSG00000245479.2	+	sense_overlapping	KNOWN	LINC01585	2	3	0.521676
chr15	90717327	90816165	90766746	ENSG00000197299.10	+	protein_coding	KNOWN	BLM	10	22	0.149775
chr15	90755243	90755312	90755277	ENSG00000200677.1	-	snoRNA	NOVEL	SNORD18	1	1	0.135061
chr15	90839724	90841378	90840551	ENSG00000259704.1	+	sense_overlapping	KNOWN	CTD-3094K11.1	1	2	0.807351
chr15	90855935	90856207	90856071	ENSG00000241869.3	-	misc_RNA	KNOWN	RN7SL363P	1	1	0.771242
chr15	90868592	90883458	90876025	ENSG00000140564.10	+	protein_coding	KNOWN	FURIN	7	16	0.545931
chr15	90883695	90895776	90889735	ENSG00000182511.11	+	protein_coding	KNOWN	FES	17	19	0.754790
chr15	90902218	90922584	90912401	ENSG00000196547.14	+	protein_coding	KNOWN	MAN2A2	30	23	1.069626
chr15	90920218	90921186	90920702	ENSG00000259661.1	-	antisense	KNOWN	AC068831.15	1	2	1.107477
chr15	90929964	90932569	90931266	ENSG00000184508.10	-	protein_coding	KNOWN	HDDC3	6	4	0.440284
chr15	90930180	90954093	90942136	ENSG00000140553.16	+	protein_coding	KNOWN	UNC45A	15	23	0.486944
chr15	90932586	90935130	90933858	ENSG00000224441.1	-	antisense	KNOWN	AC068831.3	2	2	0.431198
chr15	90952239	90955225	90953732	ENSG00000258384.1	-	antisense	KNOWN	AC068831.6	1	2	0.756808
chr15	90954870	90963125	90958997	ENSG00000166965.12	+	protein_coding	KNOWN	RCCD1	9	9	0.756808
chr15	90966038	90995629	90980833	ENSG00000198901.13	-	protein_coding	KNOWN	PRC1	19	15	0.505546
chr15	90966345	90988624	90977484	ENSG00000258725.1	+	antisense	KNOWN	PRC1-AS1	2	4	0.527601
chr15	90977208	90977305	90977256	ENSG00000200142.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.482633
chr15	90998416	91022603	91010509	ENSG00000184056.14	-	protein_coding	KNOWN	VPS33B	8	23	0.455191
chr15	91022619	91036611	91029615	ENSG00000214432.9	+	antisense	KNOWN	AC068831.10	4	5	0.415410
chr15	91022766	91023200	91022983	ENSG00000278514.1	+	lincRNA	KNOWN	AC068831.16	1	1	0.496567
chr15	91029888	91029996	91029942	ENSG00000258542.1	+	transcribed_processed_pseudogene	KNOWN	AC068831.11	1	1	0.496567
chr15	91031246	91031691	91031468	ENSG00000275929.1	-	unprocessed_pseudogene	KNOWN	AC068831.17	1	2	0.324826
chr15	91031712	91032435	91032073	ENSG00000258665.1	-	unprocessed_pseudogene	KNOWN	AC068831.12	1	3	0.324826
chr15	91099950	91301309	91200629	ENSG00000185518.11	+	protein_coding	KNOWN	SV2B	6	15	-0.146995
chr15	91408708	91605211	91506959	ENSG00000258551.5	+	lincRNA	KNOWN	CRAT37	2	4	-0.300206
chr15	91532891	91535095	91533993	ENSG00000258954.1	+	lincRNA	KNOWN	RP11-692C24.1	1	2	-0.347992
chr15	91643017	91649114	91646065	ENSG00000258765.1	-	lincRNA	KNOWN	RP11-692C24.2	1	3	-0.335429
chr15	91676771	91677060	91676915	ENSG00000258540.1	+	processed_pseudogene	KNOWN	RP11-692C24.3	1	1	-0.151122
chr15	91742841	91743955	91743398	ENSG00000259057.1	-	processed_pseudogene	KNOWN	CTD-2343P13.1	1	1	-0.075953
chr15	91853695	92172435	92013065	ENSG00000176463.13	+	protein_coding	KNOWN	SLCO3A1	13	11	0.092345
chr15	92148752	92331037	92239894	ENSG00000260661.1	-	antisense	KNOWN	RP11-152L20.3	1	4	-0.245839
chr15	92162798	92172436	92167617	ENSG00000258761.1	-	antisense	KNOWN	RP11-24J19.1	1	2	0.063280
chr15	92281484	92282084	92281784	ENSG00000258726.1	+	processed_pseudogene	KNOWN	DUXAP6	1	1	-0.451748
chr15	92285841	92286678	92286259	ENSG00000258925.2	+	processed_pseudogene	KNOWN	NPM1P5	1	1	-0.451748
chr15	92393828	92468728	92431278	ENSG00000140557.11	+	protein_coding	KNOWN	ST8SIA2	4	6	0.144343
chr15	92417547	92417689	92417618	ENSG00000239197.1	+	snoRNA	NOVEL	snoU109	1	1	0.410263
chr15	92420860	92422735	92421797	ENSG00000258739.1	+	transcribed_processed_pseudogene	KNOWN	ENO1P2	1	2	0.410263
chr15	92470233	92471546	92470889	ENSG00000259170.1	-	lincRNA	KNOWN	RP11-763K15.1	1	2	-0.068862
chr15	92471654	92501117	92486385	ENSG00000183643.4	+	lincRNA	KNOWN	C15orf32	2	3	-0.078888
chr15	92567818	92572042	92569930	ENSG00000258647.5	-	lincRNA	KNOWN	LINC00930	2	4	-0.375447
chr15	92580829	92600545	92590687	ENSG00000258676.4	+	processed_transcript	KNOWN	RP11-386M24.3	2	3	-0.029991
chr15	92592574	92596462	92594518	ENSG00000260337.3	-	processed_transcript	KNOWN	RP11-386M24.6	2	2	0.020201
chr15	92602910	92620015	92611462	ENSG00000271763.1	+	antisense	KNOWN	RP11-386M24.9	1	2	0.176132
chr15	92617443	92809884	92713663	ENSG00000185442.12	-	protein_coding	KNOWN	FAM174B	12	4	0.032789
chr15	92627073	92627414	92627243	ENSG00000259064.2	+	processed_pseudogene	KNOWN	RP11-386M24.5	1	1	0.286495
chr15	92634305	92634665	92634485	ENSG00000275965.1	+	antisense	KNOWN	RP11-386M24.10	1	1	0.039250
chr15	92699040	92724277	92711658	ENSG00000272298.1	-	processed_transcript	KNOWN	RP11-386M24.8	1	2	0.079027
chr15	92711808	92712110	92711959	ENSG00000253954.3	+	processed_pseudogene	KNOWN	HMGN1P38	1	1	0.049928
chr15	92715710	92734195	92724952	ENSG00000258741.3	-	transcribed_processed_pseudogene	KNOWN	RP11-386M24.4	2	3	-0.035307
chr15	92719393	92719740	92719566	ENSG00000240484.1	+	processed_pseudogene	KNOWN	RP11-386M24.1	1	1	0.049928
chr15	92762757	92763750	92763253	ENSG00000258562.2	+	processed_pseudogene	KNOWN	CTD-2313J17.3	1	2	-0.255932
chr15	92779757	92781492	92780624	ENSG00000260361.1	-	sense_intronic	KNOWN	CTD-2313J17.5	1	1	-0.008172
chr15	92795647	92796439	92796043	ENSG00000258527.1	+	processed_pseudogene	KNOWN	ASB9P1	1	1	0.091992
chr15	92805770	92808567	92807168	ENSG00000258922.1	-	sense_intronic	KNOWN	CTD-2313J17.1	1	2	0.091992
chr15	92808451	92809057	92808754	ENSG00000274215.1	+	lincRNA	KNOWN	CTD-2313J17.6	1	1	0.091992
chr15	92819598	92819992	92819795	ENSG00000275175.1	+	lincRNA	KNOWN	CTD-2313J17.7	1	1	0.272564
chr15	92882707	92899701	92891204	ENSG00000272888.5	+	processed_transcript	KNOWN	LINC01578	9	6	0.279812
chr15	92883413	92949230	92916321	ENSG00000279765.3	+	protein_coding	KNOWN	RP11-437B10.1	2	12	0.240503
chr15	92900189	93028005	92964097	ENSG00000173575.18	+	protein_coding	KNOWN	CHD2	20	39	0.197157
chr15	92904399	92904475	92904437	ENSG00000264173.1	+	miRNA	KNOWN	MIR3175	1	1	0.195828
chr15	93035273	93089204	93062238	ENSG00000182175.13	-	protein_coding	KNOWN	RGMA	12	5	0.280795
chr15	93065586	93066606	93066096	ENSG00000258611.2	-	transcribed_processed_pseudogene	KNOWN	RP11-368J22.2	1	1	0.342535
chr15	93206066	93208048	93207057	ENSG00000280076.1	+	TEC	KNOWN	RP11-326A13.2	1	1	0.251058
chr15	93257198	93260475	93258836	ENSG00000258888.1	+	lincRNA	KNOWN	RP11-326A13.1	1	2	0.154388
chr15	93286235	93286323	93286279	ENSG00000212063.1	-	miRNA	NOVEL	AC112693.1	1	1	0.149873
chr15	93301416	93301647	93301531	ENSG00000258971.1	-	processed_pseudogene	KNOWN	RP11-326A13.3	1	1	-0.359388
chr15	93312557	93569483	93441020	ENSG00000257060.6	+	lincRNA	KNOWN	RP11-266O8.1	5	4	-0.219366
chr15	93416850	93422576	93419713	ENSG00000258909.1	-	lincRNA	KNOWN	RP11-164C12.2	1	2	-0.188116
chr15	93430659	93431217	93430938	ENSG00000258787.1	-	processed_pseudogene	KNOWN	RP11-164C12.1	1	1	-0.126780
chr15	93589867	93760799	93675333	ENSG00000258631.2	+	lincRNA	KNOWN	RP11-739G5.1	1	4	-0.347330
chr15	93718542	94070820	93894681	ENSG00000258754.7	-	lincRNA	KNOWN	LINC01579	9	7	-0.306730
chr15	93825058	93825159	93825108	ENSG00000258627.1	-	transcribed_processed_pseudogene	KNOWN	RP11-76E17.1	1	1	-0.197515
chr15	93837611	93852981	93845296	ENSG00000259123.1	-	lincRNA	KNOWN	RP11-76E17.2	1	2	-0.297879
chr15	93863109	93878356	93870732	ENSG00000258476.5	+	lincRNA	KNOWN	RP11-76E17.3	3	5	-0.390832
chr15	93882082	93886743	93884412	ENSG00000258831.1	+	lincRNA	KNOWN	RP11-76E17.4	1	3	-0.401340
chr15	93896912	93897027	93896969	ENSG00000222409.1	-	miRNA	NOVEL	AC103996.1	1	1	-0.169133
chr15	93900701	93984150	93942425	ENSG00000258785.5	+	lincRNA	KNOWN	LINC01580	2	4	-0.335279
chr15	93905405	94107938	94006671	ENSG00000259724.1	-	lincRNA	KNOWN	LINC01581	2	9	-0.294445
chr15	94033658	94034177	94033917	ENSG00000258895.1	+	processed_pseudogene	KNOWN	CTD-2643K12.1	1	1	-0.289437
chr15	94081098	94081191	94081144	ENSG00000212022.1	-	miRNA	NOVEL	AC080032.1	1	1	-0.415350
chr15	94168349	94168751	94168550	ENSG00000258570.1	+	processed_pseudogene	KNOWN	RP11-452K20.1	1	1	-0.628854
chr15	94231538	94483952	94357745	ENSG00000140563.14	+	protein_coding	KNOWN	MCTP2	9	24	-0.316080
chr15	94273496	94274005	94273750	ENSG00000258632.2	+	processed_pseudogene	KNOWN	RP11-354B3.1	1	2	-0.309213
chr15	94600014	94600821	94600417	ENSG00000259331.1	+	lincRNA	KNOWN	RP11-57P19.1	1	2	-0.248084
chr15	94841059	95169864	95005461	ENSG00000277654.4	+	lincRNA	KNOWN	RP11-255M2.3	7	6	-0.370428
chr15	94855474	94856914	94856194	ENSG00000260521.2	+	processed_pseudogene	KNOWN	CTD-2576F9.1	1	1	-0.349135
chr15	94855586	94857011	94856298	ENSG00000270017.1	-	lincRNA	KNOWN	CTD-2576F9.2	1	2	-0.349135
chr15	95034384	95035737	95035060	ENSG00000258433.1	-	lincRNA	KNOWN	RP11-255M2.1	1	2	0.023973
chr15	95080095	95132859	95106477	ENSG00000258773.1	-	lincRNA	KNOWN	RP11-255M2.2	1	3	-0.218365
chr15	95209099	95327129	95268114	ENSG00000248441.6	-	lincRNA	KNOWN	LINC01197	5	5	-0.107157
chr15	95225326	95225864	95225595	ENSG00000273923.1	-	lincRNA	KNOWN	CTD-2536I1.3	1	1	-0.127885
chr15	95280753	95284249	95282501	ENSG00000280304.1	-	TEC	KNOWN	CTD-2536I1.2	1	1	-0.032188
chr15	95433095	95507847	95470471	ENSG00000259134.5	+	lincRNA	KNOWN	LINC00924	2	7	-0.228067
chr15	95463592	95493770	95478681	ENSG00000258489.3	-	lincRNA	KNOWN	RP11-398J10.2	1	4	-0.206130
chr15	95638346	95825451	95731898	ENSG00000275016.4	+	lincRNA	KNOWN	RP11-61O11.1	5	4	-0.197099
chr15	95745804	95745994	95745899	ENSG00000222076.1	+	snRNA	KNOWN	RNU2-3P	1	1	-0.547126
chr15	95990582	96300990	96145786	ENSG00000275443.1	+	lincRNA	KNOWN	RP11-759A24.3	1	4	-0.039696
chr15	96028089	96046930	96037509	ENSG00000259348.1	-	lincRNA	KNOWN	RP11-4G2.1	1	2	-0.185406
chr15	96049275	96064426	96056850	ENSG00000259702.1	-	lincRNA	KNOWN	RP11-236L14.1	1	2	0.203136
chr15	96080713	96084584	96082648	ENSG00000273771.1	-	lincRNA	KNOWN	RP11-236L14.2	1	2	-0.188116
chr15	96110040	96327361	96218700	ENSG00000247809.7	-	antisense	KNOWN	NR2F2-AS1	15	7	0.039747
chr15	96112628	96116051	96114339	ENSG00000280048.1	-	TEC	KNOWN	RP11-327J17.7	1	1	0.125741
chr15	96139472	96140452	96139962	ENSG00000277135.1	-	lincRNA	KNOWN	RP11-327J17.9	1	1	-0.150466
chr15	96171581	96174339	96172960	ENSG00000259359.1	+	lincRNA	KNOWN	RP11-327J17.2	2	3	0.057226
chr15	96230897	96231145	96231021	ENSG00000278146.1	+	lincRNA	KNOWN	RP11-327J17.8	1	1	0.126968
chr15	96235785	96236703	96236244	ENSG00000259763.1	+	lincRNA	KNOWN	RP11-327J17.1	1	2	0.126968
chr15	96285068	96289265	96287166	ENSG00000279645.1	-	TEC	KNOWN	RP11-759A24.1	1	1	0.126140
chr15	96294935	96298023	96296479	ENSG00000280291.1	-	TEC	KNOWN	RP11-759A24.2	1	1	0.525292
chr15	96325938	96340263	96333100	ENSG00000185551.12	+	protein_coding	KNOWN	NR2F2	5	3	0.322050
chr15	96333261	96333307	96333284	ENSG00000222651.1	+	miRNA	KNOWN	MIR1469	1	1	0.469796
chr15	96342953	96345651	96344302	ENSG00000275322.1	+	lincRNA	KNOWN	RP11-262A16.1	1	2	0.469796
chr15	96354237	96403803	96379020	ENSG00000259275.2	+	lincRNA	KNOWN	RP11-522B15.3	2	2	0.259173
chr15	96388214	96389056	96388635	ENSG00000259614.2	-	processed_pseudogene	KNOWN	RP11-522B15.6	1	1	0.307720
chr15	96393146	96405189	96399167	ENSG00000259542.5	-	lincRNA	KNOWN	RP11-522B15.4	4	3	-0.183243
chr15	96438570	96444266	96441418	ENSG00000259312.1	+	lincRNA	KNOWN	RP11-522B15.5	1	2	-0.320747
chr15	96441566	96442313	96441939	ENSG00000250825.1	-	processed_pseudogene	KNOWN	PGAM1P12	1	1	-0.320747
chr15	96448154	96448493	96448323	ENSG00000242295.1	+	processed_pseudogene	KNOWN	RP11-522B15.1	1	1	-0.320747
chr15	96448842	96449749	96449295	ENSG00000259534.1	+	lincRNA	KNOWN	RP11-522B15.7	1	2	-0.320747
chr15	96486582	96486891	96486736	ENSG00000222617.1	+	misc_RNA	KNOWN	RN7SKP254	1	1	-0.626988
chr15	96496180	96496462	96496321	ENSG00000274079.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.325620
chr15	96551381	96551517	96551449	ENSG00000259340.2	+	processed_pseudogene	KNOWN	CTD-2027G2.1	1	1	-0.333099
chr15	96756987	96758596	96757791	ENSG00000214424.5	+	processed_pseudogene	KNOWN	FAM149B1P1	1	1	-0.352572
chr15	96772005	96783312	96777658	ENSG00000259282.5	-	antisense	KNOWN	SPATA8-AS1	2	4	-0.135609
chr15	96783389	96785615	96784502	ENSG00000185594.4	+	protein_coding	KNOWN	SPATA8	4	3	-0.135609
chr15	96842069	96842384	96842226	ENSG00000223120.1	+	misc_RNA	KNOWN	RN7SKP181	1	1	-0.196578
chr15	97091262	97091352	97091307	ENSG00000215948.1	-	miRNA	NOVEL	AC055873.1	1	1	-0.119984
chr15	97272177	97319288	97295732	ENSG00000259403.1	-	lincRNA	KNOWN	RP11-315L6.1	1	3	-0.626418
chr15	97295881	97432094	97363987	ENSG00000259485.1	+	lincRNA	KNOWN	CTD-2147F2.1	2	3	-0.550948
chr15	97353497	97353815	97353656	ENSG00000242863.3	+	misc_RNA	KNOWN	RN7SL677P	1	1	-0.484655
chr15	97370371	97521811	97446091	ENSG00000259664.2	-	lincRNA	KNOWN	CTD-2147F2.2	1	5	-0.610736
chr15	97472126	97472252	97472189	ENSG00000251729.1	-	rRNA	KNOWN	RNA5SP401	1	1	-0.725144
chr15	97533738	97541476	97537607	ENSG00000279091.1	-	TEC	KNOWN	RP11-461F11.2	1	1	-0.497006
chr15	97540597	97560702	97550649	ENSG00000259582.3	-	lincRNA	KNOWN	RP11-461F11.3	2	4	-0.506953
chr15	97572185	97874550	97723367	ENSG00000251209.7	-	lincRNA	KNOWN	LINC00923	8	6	-0.468646
chr15	97876289	97878386	97877337	ENSG00000259870.1	+	lincRNA	KNOWN	RP11-753A21.2	1	1	0.110254
chr15	97895114	97895200	97895157	ENSG00000215983.2	-	miRNA	NOVEL	AC024651.1	1	1	-0.309525
chr15	97960698	97973838	97967268	ENSG00000140450.8	+	protein_coding	KNOWN	ARRDC4	1	8	-0.061118
chr15	97982509	97991142	97986825	ENSG00000259478.2	-	lincRNA	KNOWN	RP11-753A21.1	1	4	-0.128874
chr15	98003081	98021777	98012429	ENSG00000258483.2	+	lincRNA	KNOWN	AC144835.1	1	5	0.098491
chr15	98046667	98293177	98169922	ENSG00000259199.1	-	lincRNA	KNOWN	CTD-2544M6.1	1	4	-0.067536
chr15	98074667	98074763	98074715	ENSG00000222361.1	-	snRNA	KNOWN	RNU6-1186P	1	1	0.042239
chr15	98085627	98103712	98094669	ENSG00000259611.1	-	lincRNA	KNOWN	LINC01582	2	2	-0.067755
chr15	98118171	98118320	98118245	ENSG00000259266.1	+	processed_pseudogene	KNOWN	RP11-183E24.1	1	1	0.279807
chr15	98122563	98131607	98127085	ENSG00000259320.1	-	lincRNA	KNOWN	RP11-183E24.2	1	2	0.326577
chr15	98282075	98285907	98283991	ENSG00000259041.1	+	lincRNA	KNOWN	RP11-167B3.1	1	3	-0.242744
chr15	98319687	98320237	98319962	ENSG00000274312.1	-	lincRNA	KNOWN	RP11-167B3.2	1	1	-0.193629
chr15	98324273	98327494	98325883	ENSG00000277987.1	-	lincRNA	KNOWN	RP11-167B3.3	1	2	-0.193629
chr15	98437162	98514382	98475772	ENSG00000185087.11	-	protein_coding	KNOWN	FAM169B	2	7	-0.172641
chr15	98466840	98467412	98467126	ENSG00000259507.1	+	processed_pseudogene	KNOWN	RP11-719C20.1	1	1	-0.169636
chr15	98646951	98647371	98647161	ENSG00000259424.1	-	antisense	KNOWN	RP11-35O15.1	1	2	-0.343103
chr15	98648971	98964530	98806750	ENSG00000140443.13	+	protein_coding	KNOWN	IGF1R	17	21	0.291469
chr15	98660210	98660668	98660439	ENSG00000278022.1	+	sense_intronic	KNOWN	RP11-35O15.2	1	1	0.151289
chr15	98784426	98784502	98784464	ENSG00000264480.1	+	miRNA	KNOWN	MIR4714	1	1	0.084724
chr15	98880659	98893535	98887097	ENSG00000259621.1	-	antisense	KNOWN	RP11-654A16.1	1	2	0.177188
chr15	98954149	99105824	99029986	ENSG00000259475.1	-	antisense	KNOWN	RP11-654A16.3	1	4	0.259943
chr15	98968230	99007795	98988012	ENSG00000183571.9	-	protein_coding	KNOWN	PGPEP1L	2	5	0.150166
chr15	99028538	99031053	99029795	ENSG00000278090.1	+	lincRNA	KNOWN	RP11-6O2.2	1	1	0.371584
chr15	99098217	99135593	99116905	ENSG00000182253.14	+	protein_coding	KNOWN	SYNM	4	5	0.266299
chr15	99128832	99131806	99130319	ENSG00000261054.1	-	antisense	KNOWN	RP11-6O2.4	1	2	0.318274
chr15	99136323	99251223	99193773	ENSG00000103852.12	-	protein_coding	KNOWN	TTC23	19	14	0.174665
chr15	99139317	99145370	99142343	ENSG00000261616.1	+	antisense	KNOWN	RP11-6O2.3	1	2	0.334193
chr15	99157231	99161140	99159185	ENSG00000259921.1	-	sense_intronic	KNOWN	AC022819.3	1	1	0.208637
chr15	99251362	99390729	99321045	ENSG00000168904.14	+	protein_coding	KNOWN	LRRC28	22	10	-0.194614
chr15	99257539	99257670	99257604	ENSG00000264771.1	+	miRNA	NOVEL	AC022819.1	1	1	-0.004224
chr15	99257632	99260015	99258823	ENSG00000259706.1	+	processed_pseudogene	KNOWN	HSP90B2P	1	1	-0.004224
chr15	99284625	99285576	99285100	ENSG00000259228.1	-	processed_pseudogene	KNOWN	HNRNPA1P62	1	1	-0.048016
chr15	99319095	99319623	99319359	ENSG00000281635.1	-	protein_coding	KNOWN	AC022819.2	1	3	-0.336542
chr15	99337857	99338481	99338169	ENSG00000259257.1	+	processed_pseudogene	KNOWN	RP11-616M17.1	1	1	-0.056710
chr15	99395179	99396593	99395886	ENSG00000259590.1	-	lincRNA	KNOWN	RP11-20G13.3	1	2	-0.040763
chr15	99396613	99401315	99398964	ENSG00000259760.1	-	antisense	KNOWN	RP11-20G13.2	1	2	-0.040763
chr15	99416584	99417204	99416894	ENSG00000274294.1	+	lincRNA	KNOWN	RP11-20G13.5	1	1	0.432616
chr15	99427009	99431028	99429018	ENSG00000259341.1	-	lincRNA	KNOWN	RP11-20G13.1	1	2	0.433156
chr15	99497812	99498375	99498093	ENSG00000279846.1	-	TEC	KNOWN	RP11-20G13.4	1	1	0.428355
chr15	99551382	99552117	99551749	ENSG00000241562.2	-	processed_pseudogene	KNOWN	RPL7P5	1	1	0.328528
chr15	99565417	99716466	99640941	ENSG00000068305.17	+	protein_coding	KNOWN	MEF2A	13	12	-0.096642
chr15	99681786	99681877	99681831	ENSG00000201724.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.234369
chr15	99715697	99733561	99724629	ENSG00000183060.15	-	protein_coding	KNOWN	LYSMD4	11	6	0.156927
chr15	99751719	99751805	99751762	ENSG00000221691.1	+	miRNA	NOVEL	AC090825.2	1	1	-0.132882
chr15	99790156	99806927	99798541	ENSG00000182397.14	-	transcribed_unprocessed_pseudogene	KNOWN	DNM1P46	5	5	0.110370
chr15	99791127	99792847	99791987	ENSG00000259655.1	+	unprocessed_pseudogene	KNOWN	CTD-2054N24.1	1	4	0.110370
chr15	99791209	99791410	99791309	ENSG00000241588.3	+	misc_RNA	KNOWN	RN7SL484P	1	1	0.110370
chr15	99792297	99792379	99792338	ENSG00000221511.1	+	miRNA	NOVEL	AC090825.1	1	1	0.110370
chr15	99807023	99877148	99842085	ENSG00000259363.5	+	lincRNA	KNOWN	CTD-2054N24.2	4	4	-0.326225
chr15	99970215	99974010	99972112	ENSG00000254744.3	+	antisense	KNOWN	CTD-3076O17.1	1	3	0.265640
chr15	99971589	100342005	100156797	ENSG00000140470.13	-	protein_coding	KNOWN	ADAMTS17	9	22	-0.027272
chr15	99976481	99980774	99978627	ENSG00000259219.1	+	antisense	KNOWN	CTD-3076O17.2	1	2	0.265640
chr15	100074081	100074190	100074135	ENSG00000252957.1	-	rRNA	KNOWN	RNA5SP402	1	1	-0.384107
chr15	100126106	100129743	100127924	ENSG00000259356.1	+	antisense	KNOWN	RP11-90E5.1	1	2	-0.019901
chr15	100344457	100349655	100347056	ENSG00000189419.6	-	lincRNA	KNOWN	SPATA41	2	2	-0.362574
chr15	100372939	100437914	100405426	ENSG00000259430.1	+	antisense	KNOWN	CERS3-AS1	2	4	-0.307413
chr15	100400395	100544995	100472695	ENSG00000154227.13	-	protein_coding	KNOWN	CERS3	8	14	-0.313610
chr15	100547765	100550153	100548959	ENSG00000270127.2	-	lincRNA	KNOWN	RP11-526I2.5	1	1	-0.026997
chr15	100551820	100551922	100551871	ENSG00000251819.1	-	snRNA	KNOWN	RNU6-322P	1	1	-0.068944
chr15	100553529	100558954	100556241	ENSG00000259205.2	-	processed_pseudogene	KNOWN	PRKXP1	1	2	-0.068944
chr15	100558677	100559798	100559237	ENSG00000259540.1	+	antisense	KNOWN	RP11-526I2.1	2	3	-0.068944
chr15	100559369	100603230	100581299	ENSG00000140471.16	-	protein_coding	KNOWN	LINS1	14	7	-0.154087
chr15	100560686	100560792	100560739	ENSG00000200095.1	-	snRNA	KNOWN	RNU6-181P	1	1	-0.068944
chr15	100602534	100651705	100627119	ENSG00000183475.12	+	protein_coding	KNOWN	ASB7	4	6	0.035075
chr15	100638363	100638457	100638410	ENSG00000212306.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.083003
chr15	100645434	100646655	100646044	ENSG00000259381.2	-	processed_pseudogene	KNOWN	RP11-192M23.1	1	1	0.083003
chr15	100716249	100828497	100772373	ENSG00000259579.1	+	lincRNA	KNOWN	RP11-66B24.5	1	3	0.249019
chr15	100783470	100785235	100784352	ENSG00000279588.1	-	protein_coding	KNOWN	AC087762.1	1	1	0.668687
chr15	100846604	100846767	100846685	ENSG00000259586.1	-	processed_pseudogene	KNOWN	RP11-66B24.3	1	1	0.091992
chr15	100849561	100861756	100855658	ENSG00000232386.9	+	lincRNA	KNOWN	RP11-66B24.2	5	4	0.233055
chr15	100849831	100865457	100857644	ENSG00000272808.3	+	processed_transcript	KNOWN	RP11-66B24.7	1	5	0.236737
chr15	100861843	100874369	100868106	ENSG00000259604.5	+	lincRNA	KNOWN	RP11-66B24.1	3	4	0.285786
chr15	100861924	100885329	100873626	ENSG00000272639.1	+	processed_transcript	KNOWN	RP11-66B24.8	1	3	0.327442
chr15	100877714	100916626	100897170	ENSG00000184254.16	+	protein_coding	KNOWN	ALDH1A3	7	13	0.399130
chr15	100888472	100889106	100888789	ENSG00000278456.1	-	antisense	KNOWN	RP11-66B24.9	1	1	0.374392
chr15	100892859	100919283	100906071	ENSG00000259583.2	-	antisense	KNOWN	RP11-66B24.4	3	3	0.369181
chr15	100919215	101078254	100998734	ENSG00000154237.12	+	protein_coding	KNOWN	LRRK1	11	34	0.348152
chr15	101043716	101049456	101046586	ENSG00000259376.1	-	antisense	KNOWN	RP11-505E24.3	1	2	0.425548
chr15	101050732	101086066	101068399	ENSG00000259755.1	-	antisense	KNOWN	RP11-505E24.2	1	3	0.455450
chr15	101116603	101117546	101117074	ENSG00000259365.1	+	lincRNA	KNOWN	RP11-424I19.1	1	2	0.407768
chr15	101168530	101170821	101169675	ENSG00000259182.5	+	lincRNA	KNOWN	RP11-424I19.2	2	2	0.544186
chr15	101175723	101251932	101213827	ENSG00000131873.5	-	protein_coding	KNOWN	CHSY1	6	3	0.332251
chr15	101270817	101277500	101274158	ENSG00000131871.14	-	protein_coding	KNOWN	VIMP	8	7	0.455428
chr15	101281510	101295282	101288396	ENSG00000131876.16	-	protein_coding	KNOWN	SNRPA1	16	10	0.360058
chr15	101295419	101305737	101300578	ENSG00000259172.1	+	antisense	KNOWN	RP11-299G20.2	1	2	0.206812
chr15	101297142	101525202	101411172	ENSG00000140479.16	-	protein_coding	KNOWN	PCSK6	21	22	0.123861
chr15	101299656	101301648	101300652	ENSG00000279970.1	-	TEC	KNOWN	RP11-299G20.5	1	1	0.206812
chr15	101334437	101337428	101335932	ENSG00000259764.1	+	antisense	KNOWN	PCSK6-AS1	1	3	0.349928
chr15	101495052	101495567	101495309	ENSG00000274139.1	-	sense_intronic	KNOWN	RP11-14C10.3	1	1	0.122049
chr15	101522597	101524739	101523668	ENSG00000277210.3	-	lincRNA	KNOWN	RP11-14C10.6	1	1	-0.255932
chr15	101527581	101528349	101527965	ENSG00000282793.1	-	lincRNA	KNOWN	RP11-14C10.4	1	2	-0.255932
chr15	101562536	101562974	101562755	ENSG00000259464.2	+	processed_pseudogene	KNOWN	SNRPCP18	1	1	0.158081
chr15	101580893	101581556	101581224	ENSG00000259695.2	-	processed_pseudogene	KNOWN	RP11-14C10.2	1	1	-0.009410
chr15	101613676	101614339	101614007	ENSG00000273585.1	-	lincRNA	KNOWN	RP11-14C10.5	1	2	0.439342
chr15	101621444	101652391	101636917	ENSG00000184277.12	-	protein_coding	KNOWN	TM2D3	16	6	0.072559
chr15	101648206	101648312	101648259	ENSG00000252614.1	-	snRNA	KNOWN	RNU6-807P	1	1	-0.102920
chr15	101653598	101724604	101689101	ENSG00000185418.15	-	protein_coding	KNOWN	TARSL2	7	20	0.150979
chr15	101737099	101745710	101741404	ENSG00000259658.3	-	lincRNA	KNOWN	RP11-89K11.1	2	3	-0.022080
chr15	101751032	101794302	101772667	ENSG00000259660.2	+	transcribed_unprocessed_pseudogene	KNOWN	DNM1P47	3	4	0.424725
chr15	101771758	101781989	101776873	ENSG00000259236.1	-	unprocessed_pseudogene	KNOWN	GOLGA8VP	1	15	0.521595
chr15	101772300	101772381	101772340	ENSG00000277814.1	-	miRNA	NOVEL	AC107977.2	1	1	0.521595
chr15	101773238	101773513	101773375	ENSG00000240927.3	-	misc_RNA	KNOWN	RN7SL209P	1	1	0.521595
chr15	101775463	101775531	101775497	ENSG00000274913.1	-	miRNA	NOVEL	AC107977.1	1	1	0.521595
chr15	101805699	101806686	101806192	ENSG00000184140.5	+	protein_coding	KNOWN	OR4F6	1	1	-0.024201
chr15	101805720	101819147	101812433	ENSG00000182854.6	+	protein_coding	KNOWN	OR4F15	2	3	0.146322
chr15	101828741	101829679	101829210	ENSG00000232459.1	+	unprocessed_pseudogene	KNOWN	OR4F14P	1	1	0.226085
chr15	101842119	101850324	101846221	ENSG00000214344.4	+	transcribed_unprocessed_pseudogene	KNOWN	OR4F13P	2	5	-0.280675
chr15	101875964	101876901	101876432	ENSG00000257109.3	+	unprocessed_pseudogene	KNOWN	OR4F28P	1	1	-0.021219
chr15	101887354	101887767	101887560	ENSG00000259454.1	-	processed_pseudogene	KNOWN	WBP1LP5	1	1	-0.021219
chr15	101903154	101903204	101903179	ENSG00000259646.1	+	unprocessed_pseudogene	KNOWN	AC140725.7	1	1	0.057640
chr15	101922042	101923095	101922568	ENSG00000177693.3	-	protein_coding	KNOWN	OR4F4	1	1	-0.265560
chr15	101926805	101927707	101927256	ENSG00000183909.5	-	unprocessed_pseudogene	KNOWN	OR4G2P	1	1	-0.265560
chr15	101937591	101938470	101938030	ENSG00000275771.1	-	processed_pseudogene	KNOWN	AC140725.8	1	1	-0.136114
chr15	101954885	101956412	101955648	ENSG00000248893.3	+	lincRNA	KNOWN	FAM138E	2	3	0.214953
chr15	101959848	101961408	101960628	ENSG00000259553.3	-	lincRNA	KNOWN	AC140725.4	2	3	0.214953
chr15	101960459	101960596	101960527	ENSG00000275690.1	-	miRNA	KNOWN	MIR1302-10	1	1	0.214953
chr15	101961603	101976543	101969073	ENSG00000185596.16	+	transcribed_unprocessed_pseudogene	KNOWN	WASH3P	7	10	0.432867
chr15	101973524	101973591	101973557	ENSG00000275449.1	+	miRNA	KNOWN	MIR6859-3	1	1	0.712453
chr15	101976558	101979093	101977825	ENSG00000248472.8	-	transcribed_unprocessed_pseudogene	KNOWN	DDX11L9	3	5	0.712453
chr15_KI270727v1_random	20741	22392	21566	ENSG00000278673.1	-	pseudogene	NOVEL	AC136352.6	1	2	NA
chr15_KI270727v1_random	34890	34996	34943	ENSG00000277890.1	+	snRNA	NOVEL	U6	1	1	NA
chr15_KI270727v1_random	51711	51792	51751	ENSG00000273646.1	-	miRNA	NOVEL	AC136352.1	1	1	NA
chr15_KI270727v1_random	100123	101141	100632	ENSG00000277666.1	-	protein_coding	NOVEL	AC136352.5	1	3	NA
chr15_KI270727v1_random	133581	133655	133618	ENSG00000276579.1	+	miRNA	NOVEL	AC136352.2	1	1	NA
chr15_KI270727v1_random	136160	167571	151865	ENSG00000276760.4	-	protein_coding	KNOWN	AC136352.4	2	11	NA
chr15_KI270727v1_random	156089	156195	156142	ENSG00000277927.1	-	snRNA	NOVEL	U6	1	1	NA
chr15_KI270727v1_random	241093	241174	241133	ENSG00000273766.1	+	miRNA	KNOWN	hsa-mir-5701-1	1	1	NA
chr15_KI270727v1_random	372322	373405	372863	ENSG00000275249.1	+	protein_coding	NOVEL	AC171558.2	1	1	NA
chr15_KI270727v1_random	386278	387620	386949	ENSG00000274792.1	+	protein_coding	NOVEL	AC171558.1	1	1	NA
chr15_KI270727v1_random	417283	418206	417744	ENSG00000276872.1	+	pseudogene	NOVEL	AC171558.3	1	2	NA
chr16	11555	14090	12822	ENSG00000233614.6	+	transcribed_unprocessed_pseudogene	KNOWN	DDX11L10	2	5	1.077917
chr16	14381	18068	16224	ENSG00000234769.7	-	unprocessed_pseudogene	KNOWN	WASH4P	1	9	1.077917
chr16	17052	17119	17085	ENSG00000278739.1	-	miRNA	KNOWN	MIR6859-4	1	1	1.077917
chr16	17514	35195	26354	ENSG00000260803.1	-	processed_transcript	KNOWN	Z84812.4	1	4	0.982457
chr16	22910	25123	24016	ENSG00000231439.4	+	lincRNA	KNOWN	WASIR2	1	2	1.077917
chr16	29336	38321	33828	ENSG00000226942.2	-	unprocessed_pseudogene	KNOWN	IL9RP3	1	9	0.777054
chr16	46407	53628	50017	ENSG00000161980.5	-	protein_coding	KNOWN	POLR3K	2	3	0.883050
chr16	47735	48007	47871	ENSG00000281807.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.753085
chr16	53010	57669	55339	ENSG00000161981.10	+	protein_coding	KNOWN	SNRNP25	7	6	1.011690
chr16	58059	76355	67207	ENSG00000007384.15	-	protein_coding	KNOWN	RHBDF1	11	18	1.090417
chr16	74683	74961	74822	ENSG00000278995.1	+	TEC	KNOWN	Z69720.3	1	1	1.238310
chr16	77007	85853	81430	ENSG00000103152.11	+	protein_coding	KNOWN	MPG	5	5	1.238310
chr16	84271	138860	111565	ENSG00000103148.15	-	protein_coding	KNOWN	NPRL3	14	15	1.143484
chr16	90631	91102	90866	ENSG00000269482.1	+	antisense	KNOWN	Z69720.2	1	1	1.129467
chr16	125737	127219	126478	ENSG00000228779.1	+	antisense	KNOWN	Z69666.2	1	2	1.079501
chr16	152687	154503	153595	ENSG00000130656.4	+	protein_coding	KNOWN	HBZ	1	3	0.947118
chr16	153892	166768	160330	ENSG00000206177.6	+	protein_coding	KNOWN	HBM	3	3	0.947118
chr16	163122	165156	164139	ENSG00000206178.2	+	unprocessed_pseudogene	KNOWN	HBZP1	1	3	0.947118
chr16	168679	169334	169006	ENSG00000225323.1	+	unprocessed_pseudogene	KNOWN	Z84721.4	1	3	0.947118
chr16	172847	173710	173278	ENSG00000188536.12	+	protein_coding	KNOWN	HBA2	4	3	1.264977
chr16	176680	177522	177101	ENSG00000206172.8	+	protein_coding	KNOWN	HBA1	4	3	1.264977
chr16	178554	178656	178605	ENSG00000207243.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.264977
chr16	180453	181181	180817	ENSG00000086506.2	+	protein_coding	KNOWN	HBQ1	1	3	1.264977
chr16	185748	186294	186021	ENSG00000268836.1	-	lincRNA	KNOWN	LA16c-OS12.2	1	1	1.264977
chr16	188969	229463	209216	ENSG00000007392.16	-	protein_coding	KNOWN	LUC7L	21	11	1.077692
chr16	231134	231472	231303	ENSG00000206168.1	+	processed_pseudogene	KNOWN	Z69890.1	1	1	0.903230
chr16	234546	268971	251758	ENSG00000167930.15	+	protein_coding	KNOWN	FAM234A	16	14	0.915896
chr16	249547	269943	259745	ENSG00000269881.1	+	protein_coding	KNOWN	AC004754.3	1	13	0.925704
chr16	268301	275980	272140	ENSG00000076344.15	-	protein_coding	KNOWN	RGS11	8	17	1.254148
chr16	268727	283010	275868	ENSG00000242173.8	+	protein_coding	KNOWN	ARHGDIG	7	6	1.309753
chr16	283152	287215	285183	ENSG00000185615.15	+	protein_coding	KNOWN	PDIA2	7	11	1.347249
chr16	287440	352673	320056	ENSG00000103126.14	-	protein_coding	KNOWN	AXIN1	5	11	1.108744
chr16	367384	370527	368955	ENSG00000086504.15	-	protein_coding	KNOWN	MRPL28	10	6	1.387335
chr16	370773	387113	378943	ENSG00000129925.10	-	protein_coding	KNOWN	TMEM8A	8	13	1.755536
chr16	382097	392960	387528	ENSG00000236829.9	+	transcribed_processed_pseudogene	KNOWN	Z97634.3	3	3	1.703852
chr16	396725	410367	403546	ENSG00000103202.12	+	protein_coding	KNOWN	NME4	12	11	1.559853
chr16	401826	412487	407156	ENSG00000242612.6	+	protein_coding	KNOWN	DECR2	17	11	1.513410
chr16	424243	424543	424393	ENSG00000276984.1	-	lincRNA	KNOWN	LA16c-359F1.1	1	1	1.340905
chr16	425619	523011	474315	ENSG00000090565.15	+	protein_coding	KNOWN	RAB11FIP3	11	15	1.146895
chr16	439297	439397	439347	ENSG00000201034.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.968059
chr16	451404	453461	452432	ENSG00000230428.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP1-196A12.1	1	3	1.020439
chr16	525155	527407	526281	ENSG00000277142.1	-	lincRNA	KNOWN	LINC00235	1	1	1.112226
chr16	527717	554636	541176	ENSG00000103326.10	+	protein_coding	KNOWN	CAPN15	7	14	1.484105
chr16	535316	535368	535342	ENSG00000266124.1	+	miRNA	KNOWN	MIR5587	1	1	1.463739
chr16	543277	543366	543321	ENSG00000266235.1	+	miRNA	KNOWN	MIR3176	1	1	1.463739
chr16	547185	553847	550516	ENSG00000261691.1	-	antisense	KNOWN	LA16c-366D1.3	1	2	1.631948
chr16	560422	565528	562975	ENSG00000161992.5	+	protein_coding	KNOWN	PRR35	1	3	1.754957
chr16	566995	584136	575565	ENSG00000007541.15	+	protein_coding	KNOWN	PIGQ	17	12	1.614380
chr16	566996	569495	568245	ENSG00000257108.1	+	protein_coding	KNOWN	NHLRC4	2	2	1.754957
chr16	568837	576257	572547	ENSG00000282907.1	+	processed_transcript	KNOWN	LA16c-407A10.3	2	4	1.611201
chr16	589357	629272	609314	ENSG00000197562.9	+	protein_coding	KNOWN	RAB40C	12	7	1.325542
chr16	629239	634116	631677	ENSG00000127578.6	+	protein_coding	KNOWN	WFIKKN1	2	2	1.657193
chr16	634427	636366	635396	ENSG00000130731.15	-	protein_coding	KNOWN	C16orf13	14	6	1.729422
chr16	636817	648474	642645	ENSG00000172366.19	+	protein_coding	KNOWN	FAM195A	11	6	1.729422
chr16	643262	768865	706063	ENSG00000102854.14	+	protein_coding	KNOWN	MSLN	9	18	1.572995
chr16	648473	649200	648836	ENSG00000228201.1	-	antisense	KNOWN	AL022341.3	1	2	1.729422
chr16	649311	667833	658572	ENSG00000161996.17	+	protein_coding	KNOWN	WDR90	26	41	1.846215
chr16	654611	656194	655402	ENSG00000262528.2	-	antisense	KNOWN	LA16c-349E10.1	1	2	1.850721
chr16	668086	674174	671130	ENSG00000140983.13	+	protein_coding	KNOWN	RHOT2	27	19	1.464421
chr16	675666	678268	676967	ENSG00000103269.13	+	protein_coding	KNOWN	RHBDL1	4	8	1.287417
chr16	678504	679777	679140	ENSG00000260394.2	-	antisense	KNOWN	LA16c-313D11.9	2	4	1.287417
chr16	678645	679061	678853	ENSG00000279441.1	+	TEC	KNOWN	LA16c-313D11.13	1	1	1.287417
chr16	680224	682870	681547	ENSG00000103266.10	+	protein_coding	KNOWN	STUB1	11	7	1.287417
chr16	681671	684528	683099	ENSG00000161999.11	-	protein_coding	KNOWN	JMJD8	16	9	1.287417
chr16	684622	690444	687533	ENSG00000127580.15	-	protein_coding	KNOWN	WDR24	3	13	1.329300
chr16	689001	692554	690777	ENSG00000261659.2	+	processed_transcript	KNOWN	LA16c-313D11.12	2	2	1.681466
chr16	692498	705829	699163	ENSG00000127585.11	-	protein_coding	KNOWN	FBXL16	5	7	1.835384
chr16	707650	709067	708358	ENSG00000279255.1	+	TEC	KNOWN	LA16c-380A1.2	1	1	1.835384
chr16	710746	711277	711011	ENSG00000259840.1	-	lincRNA	KNOWN	LA16c-380A1.1	1	2	1.400893
chr16	715115	719655	717385	ENSG00000103260.8	+	protein_coding	KNOWN	METRN	6	4	1.400893
chr16	720581	722601	721591	ENSG00000103254.9	+	protein_coding	KNOWN	FAM173A	8	5	1.400893
chr16	722582	726954	724768	ENSG00000162004.16	-	protein_coding	KNOWN	CCDC78	16	14	1.400893
chr16	726936	735525	731230	ENSG00000103253.17	+	protein_coding	KNOWN	HAGHL	19	8	1.531006
chr16	729753	741329	735541	ENSG00000103245.13	-	protein_coding	KNOWN	NARFL	21	11	1.598828
chr16	769119	769443	769281	ENSG00000279136.1	-	TEC	KNOWN	LA16c-335H7.2	1	1	1.397800
chr16	769428	783370	776399	ENSG00000162006.9	-	protein_coding	KNOWN	MSLNL	3	15	1.448512
chr16	770183	770277	770230	ENSG00000207579.1	+	miRNA	KNOWN	MIR662	1	1	1.450678
chr16	784974	788397	786685	ENSG00000007376.7	-	protein_coding	KNOWN	RPUSD1	10	6	1.450678
chr16	788046	800737	794391	ENSG00000127586.16	+	protein_coding	KNOWN	CHTF18	20	24	1.394160
chr16	798041	800733	799387	ENSG00000127588.4	-	protein_coding	KNOWN	GNG13	1	3	1.383881
chr16	805443	813861	809652	ENSG00000167945.1	+	protein_coding	KNOWN	PRR25	1	3	1.359231
chr16	848525	849065	848795	ENSG00000275438.1	-	lincRNA	KNOWN	LA16c-360A4.1	1	1	1.050651
chr16	853634	981318	917476	ENSG00000103227.18	-	protein_coding	KNOWN	LMF1	17	12	1.101547
chr16	883780	885090	884435	ENSG00000260022.1	+	antisense	KNOWN	LA16c-306A4.1	1	2	1.082211
chr16	898967	905224	902095	ENSG00000260316.2	-	sense_intronic	KNOWN	LA16c-306A4.2	1	3	1.226921
chr16	921033	934495	927764	ENSG00000260439.1	+	antisense	KNOWN	LMF1-AS1	2	3	1.119655
chr16	968375	969012	968693	ENSG00000276931.1	-	sense_intronic	KNOWN	RP11-161M6.6	1	1	0.865586
chr16	975761	981596	978678	ENSG00000260807.6	-	lincRNA	KNOWN	RP11-161M6.2	8	4	1.180477
chr16	981808	986979	984393	ENSG00000005513.9	+	protein_coding	KNOWN	SOX8	2	3	1.180477
chr16	991151	1000926	996038	ENSG00000260496.3	-	lincRNA	KNOWN	RP11-161M6.3	2	8	1.330262
chr16	1064093	1078731	1071412	ENSG00000261713.6	-	processed_transcript	KNOWN	SSTR5-AS1	5	4	1.292792
chr16	1065240	1066502	1065871	ENSG00000261720.1	+	lincRNA	KNOWN	RP11-161M6.5	1	2	1.391259
chr16	1078781	1080142	1079461	ENSG00000162009.8	+	protein_coding	KNOWN	SSTR5	1	1	1.226192
chr16	1090005	1096244	1093124	ENSG00000184471.7	-	protein_coding	KNOWN	C1QTNF8	2	8	1.299317
chr16	1103280	1105461	1104370	ENSG00000260702.2	-	unprocessed_pseudogene	KNOWN	LA16c-349E11.1	1	3	1.299317
chr16	1111627	1113399	1112513	ENSG00000260532.1	+	lincRNA	KNOWN	LA16c-381G6.1	1	1	1.333367
chr16	1148224	1148754	1148489	ENSG00000273551.1	-	lincRNA	KNOWN	RP11-616M22.11	1	1	1.324877
chr16	1153241	1221771	1187506	ENSG00000196557.10	+	protein_coding	KNOWN	CACNA1H	9	35	1.284656
chr16	1156976	1157974	1157475	ENSG00000260403.1	-	antisense	KNOWN	RP11-616M22.1	1	2	1.397095
chr16	1159548	1160176	1159862	ENSG00000259910.1	-	antisense	KNOWN	RP11-616M22.2	1	2	1.397095
chr16	1206560	1207124	1206842	ENSG00000261294.1	-	antisense	KNOWN	RP11-616M22.3	1	2	1.433549
chr16	1221651	1225257	1223454	ENSG00000116176.6	-	protein_coding	KNOWN	TPSG1	2	6	1.130127
chr16	1223639	1224143	1223891	ENSG00000277010.1	+	antisense	KNOWN	RP11-616M22.12	1	1	1.130127
chr16	1227272	1230184	1228728	ENSG00000197253.13	-	protein_coding	KNOWN	TPSB2	3	8	1.129187
chr16	1240696	1242554	1241625	ENSG00000172236.16	+	protein_coding	KNOWN	TPSAB1	4	6	1.115324
chr16	1256059	1258998	1257528	ENSG00000095917.13	+	protein_coding	KNOWN	TPSD1	2	6	1.155070
chr16	1257339	1258074	1257706	ENSG00000260182.1	+	sense_intronic	KNOWN	RP11-616M22.5	1	2	1.155070
chr16	1260952	1263845	1262398	ENSG00000196364.9	-	transcribed_unprocessed_pseudogene	KNOWN	PRSS29P	2	4	1.155070
chr16	1273751	1276522	1275136	ENSG00000261564.1	-	unprocessed_pseudogene	KNOWN	RP11-616M22.10	1	3	1.205450
chr16	1280161	1280544	1280352	ENSG00000260991.2	-	unprocessed_pseudogene	KNOWN	RP11-616M22.9	1	2	1.205450
chr16	1286351	1288837	1287594	ENSG00000260284.1	-	unprocessed_pseudogene	KNOWN	TPSP2	1	4	1.205450
chr16	1294551	1299166	1296858	ENSG00000260710.1	-	lincRNA	KNOWN	RP11-616M22.7	1	3	1.632216
chr16	1305547	1309413	1307480	ENSG00000274751.1	-	antisense	KNOWN	LA16c-358B7.4	1	1	1.632216
chr16	1308880	1327018	1317949	ENSG00000103275.18	+	protein_coding	KNOWN	UBE2I	19	8	1.356477
chr16	1317891	1322845	1320368	ENSG00000261505.1	-	antisense	KNOWN	LA16c-358B7.3	2	2	1.338347
chr16	1329078	1329777	1329427	ENSG00000219274.1	+	processed_pseudogene	KNOWN	RPS20P2	1	2	1.338347
chr16	1333601	1349441	1341521	ENSG00000007516.13	+	protein_coding	KNOWN	BAIAP3	16	34	1.214476
chr16	1349240	1351911	1350575	ENSG00000007520.3	-	protein_coding	KNOWN	TSR3	2	6	1.375853
chr16	1351923	1364113	1358018	ENSG00000090581.9	+	protein_coding	KNOWN	GNPTG	9	11	1.439915
chr16	1358900	1361405	1360152	ENSG00000260425.1	-	antisense	KNOWN	LA16c-316G12.2	1	2	1.439915
chr16	1363205	1414751	1388978	ENSG00000059145.18	-	protein_coding	KNOWN	UNKL	17	15	1.375282
chr16	1379289	1379423	1379356	ENSG00000265529.1	-	miRNA	NOVEL	AL031721.1	1	1	1.543555
chr16	1408834	1412248	1410541	ENSG00000260132.1	+	antisense	KNOWN	LA16c-312E8.2	1	2	1.245509
chr16	1419744	1420800	1420272	ENSG00000174109.4	-	protein_coding	KNOWN	C16orf91	2	2	1.263007
chr16	1434383	1444556	1439469	ENSG00000197599.12	-	protein_coding	KNOWN	CCDC154	4	17	1.577419
chr16	1437154	1439315	1438234	ENSG00000279930.1	+	TEC	KNOWN	LA16c-312E8.4	1	1	1.577419
chr16	1444934	1475580	1460257	ENSG00000103249.17	-	protein_coding	KNOWN	CLCN7	14	25	1.502533
chr16	1445343	1446519	1445931	ENSG00000261641.2	+	antisense	KNOWN	LA16c-390E6.5	1	2	1.577419
chr16	1451760	1452653	1452206	ENSG00000260051.1	+	antisense	KNOWN	LA16c-390E6.4	1	2	1.520282
chr16	1467673	1472684	1470178	ENSG00000261430.1	-	sense_intronic	KNOWN	LA16c-390E6.3	1	2	1.440276
chr16	1477830	1478583	1478206	ENSG00000219027.2	+	processed_pseudogene	KNOWN	RPS3AP2	1	1	1.370968
chr16	1485886	1488981	1487433	ENSG00000251692.7	-	protein_coding	KNOWN	PTX4	3	3	1.370968
chr16	1493344	1510457	1501900	ENSG00000100726.14	+	protein_coding	KNOWN	TELO2	8	21	1.316399
chr16	1510427	1612110	1561268	ENSG00000187535.13	-	protein_coding	KNOWN	IFT140	11	31	1.273703
chr16	1512979	1514675	1513827	ENSG00000260646.1	+	lincRNA	KNOWN	LA16c-385E7.1	1	2	1.389672
chr16	1528688	1555580	1542134	ENSG00000131634.13	+	protein_coding	KNOWN	TMEM204	2	4	1.453725
chr16	1530715	1533301	1532008	ENSG00000280062.1	+	TEC	KNOWN	LA16c-380F5.1	1	1	1.498532
chr16	1553655	1554130	1553892	ENSG00000280231.1	-	TEC	KNOWN	LA16c-380F5.3	1	1	1.308200
chr16	1576716	1578371	1577543	ENSG00000280327.1	-	TEC	KNOWN	LA16c-313F4.1	1	1	1.096085
chr16	1579242	1580308	1579775	ENSG00000260954.1	-	sense_intronic	KNOWN	LA16c-425C2.1	1	2	1.096085
chr16	1580527	1610328	1595427	ENSG00000260989.1	+	antisense	KNOWN	LA16c-395F10.2	1	3	1.109072
chr16	1612325	1677908	1645116	ENSG00000007545.15	+	protein_coding	KNOWN	CRAMP1	8	21	1.117793
chr16	1625628	1626160	1625894	ENSG00000226890.1	-	antisense	KNOWN	LA16c-395F10.1	1	2	0.892054
chr16	1632259	1686715	1659487	ENSG00000261732.1	+	protein_coding	KNOWN	LA16c-431H6.6	1	23	1.224162
chr16	1678256	1702280	1690268	ENSG00000206053.12	+	protein_coding	KNOWN	HN1L	14	6	1.226720
chr16	1688355	1690536	1689445	ENSG00000278987.1	+	TEC	KNOWN	LA16c-431H6.7	1	1	1.292845
chr16	1706183	1770317	1738250	ENSG00000138834.12	+	protein_coding	KNOWN	MAPK8IP3	16	32	1.399415
chr16	1707252	1707973	1707612	ENSG00000275092.1	+	sense_intronic	KNOWN	LA16c-329F2.2	1	1	1.104740
chr16	1713527	1714208	1713867	ENSG00000261399.1	-	antisense	KNOWN	LA16c-329F2.1	1	2	1.267215
chr16	1734985	1735066	1735025	ENSG00000265820.1	+	miRNA	KNOWN	MIR3177	1	1	1.403325
chr16	1751559	1752262	1751910	ENSG00000261207.1	-	antisense	KNOWN	LA16c-361A3.3	1	2	1.580491
chr16	1770286	1771730	1771008	ENSG00000103024.7	-	protein_coding	KNOWN	NME3	11	5	1.615554
chr16	1771890	1773155	1772522	ENSG00000074071.13	-	protein_coding	KNOWN	MRPS34	4	9	1.615554
chr16	1773207	1781708	1777457	ENSG00000197774.12	+	protein_coding	KNOWN	EME2	6	8	1.615554
chr16	1776712	1793700	1785206	ENSG00000162032.15	-	protein_coding	KNOWN	SPSB3	12	7	1.574098
chr16	1782901	1789191	1786046	ENSG00000095906.16	+	protein_coding	KNOWN	NUBP2	16	8	1.615554
chr16	1790413	1794971	1792692	ENSG00000099769.5	-	protein_coding	KNOWN	IGFALS	3	2	1.425265
chr16	1795620	1827194	1811407	ENSG00000063854.12	-	protein_coding	KNOWN	HAGH	12	10	1.342263
chr16	1826941	1840207	1833574	ENSG00000180185.11	+	protein_coding	KNOWN	FAHD1	4	3	1.284808
chr16	1833983	1884294	1859138	ENSG00000162039.14	-	protein_coding	KNOWN	MEIOB	7	14	1.047653
chr16	1841020	1843547	1842283	ENSG00000260541.1	-	sense_overlapping	KNOWN	LA16c-429E7.1	1	2	1.288389
chr16	1878285	1884233	1881259	ENSG00000281219.2	-	lincRNA	KNOWN	LINC00254	2	4	0.893913
chr16	1889114	1890434	1889774	ENSG00000259947.1	+	lincRNA	KNOWN	XX-DJ76P10__A.2	1	2	0.888576
chr16	1911463	1918440	1914951	ENSG00000162040.6	-	protein_coding	KNOWN	HS3ST6	1	2	0.969309
chr16	1938210	1943326	1940768	ENSG00000198736.11	-	protein_coding	KNOWN	MSRB1	6	5	1.226477
chr16	1943974	1957606	1950790	ENSG00000140986.7	-	protein_coding	KNOWN	RPL3L	3	10	1.168129
chr16	1959508	1961975	1960741	ENSG00000140990.14	+	protein_coding	KNOWN	NDUFB10	5	4	1.121915
chr16	1962052	1964860	1963456	ENSG00000140988.15	-	protein_coding	KNOWN	RPS2	17	7	1.121915
chr16	1962334	1962466	1962400	ENSG00000206811.1	-	snoRNA	KNOWN	SNORA10	1	1	1.121915
chr16	1962973	1963106	1963039	ENSG00000207405.1	-	snoRNA	KNOWN	SNORA64	1	1	1.121915
chr16	1963745	1964095	1963920	ENSG00000255513.1	-	transcribed_processed_pseudogene	KNOWN	AC005363.9	1	1	1.121915
chr16	1964959	1965509	1965234	ENSG00000255198.4	+	lincRNA	KNOWN	SNHG9	2	2	1.121915
chr16	1965184	1965310	1965247	ENSG00000273587.1	+	snoRNA	KNOWN	SNORA78	1	1	1.121915
chr16	1966823	1968975	1967899	ENSG00000179580.9	+	protein_coding	KNOWN	RNF151	3	4	1.121915
chr16	1971655	1971896	1971775	ENSG00000277602.1	-	lincRNA	KNOWN	AC005363.11	1	1	1.360149
chr16	1972037	1982933	1977485	ENSG00000183751.14	+	protein_coding	KNOWN	TBL3	8	26	1.360149
chr16	1978917	1984192	1981554	ENSG00000196408.11	-	protein_coding	KNOWN	NOXO1	7	8	1.360149
chr16	1984207	1987749	1985978	ENSG00000127554.12	+	protein_coding	KNOWN	GFER	5	3	1.360149
chr16	1984877	1990357	1987617	ENSG00000261790.1	-	lincRNA	KNOWN	AC005606.14	2	2	1.366681
chr16	1989660	1994275	1991967	ENSG00000127561.14	+	protein_coding	KNOWN	SYNGR3	6	4	1.452798
chr16	1997654	1998374	1998014	ENSG00000260107.1	+	lincRNA	KNOWN	AC005606.15	1	2	1.460143
chr16	1997654	2009823	2003738	ENSG00000167962.12	-	protein_coding	KNOWN	ZNF598	10	14	1.460143
chr16	2009926	2020755	2015340	ENSG00000183971.5	+	protein_coding	KNOWN	NPW	3	3	1.136455
chr16	2013181	2013476	2013328	ENSG00000265386.2	+	misc_RNA	KNOWN	RN7SL219P	1	1	1.134258
chr16	2025356	2039026	2032191	ENSG00000065054.13	+	protein_coding	KNOWN	SLC9A3R2	9	7	1.507432
chr16	2039815	2047866	2043840	ENSG00000065057.7	-	protein_coding	KNOWN	NTHL1	10	7	1.699372
chr16	2047465	2088720	2068092	ENSG00000103197.16	+	protein_coding	KNOWN	TSC2	26	42	1.544658
chr16	2088710	2135898	2112304	ENSG00000008710.17	-	protein_coding	KNOWN	PKD1	40	46	1.638162
chr16	2090195	2090284	2090239	ENSG00000221656.1	-	miRNA	KNOWN	MIR1225	1	1	1.721154
chr16	2091436	2095433	2093434	ENSG00000259933.6	+	sense_overlapping	KNOWN	RP11-304L19.1	2	4	1.721154
chr16	2094830	2097026	2095928	ENSG00000261123.1	-	sense_intronic	KNOWN	RP11-304L19.3	1	2	1.721154
chr16	2102257	2102316	2102286	ENSG00000276783.1	-	miRNA	NOVEL	AC009065.3	1	1	1.721154
chr16	2106669	2106753	2106711	ENSG00000273879.1	-	miRNA	KNOWN	MIR6511B1	1	1	1.721154
chr16	2112335	2113342	2112838	ENSG00000261240.1	+	antisense	KNOWN	RP11-304L19.4	1	2	1.577419
chr16	2119207	2120248	2119727	ENSG00000260447.1	+	antisense	KNOWN	RP11-304L19.2	1	2	1.577419
chr16	2131851	2131950	2131900	ENSG00000200059.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.563134
chr16	2133119	2133204	2133161	ENSG00000265867.1	+	miRNA	KNOWN	MIR4516	1	1	1.563134
chr16	2135977	2136129	2136053	ENSG00000264397.1	-	miRNA	KNOWN	MIR3180-5	1	1	1.563134
chr16	2140803	2154165	2147484	ENSG00000167964.12	+	protein_coding	KNOWN	RAB26	8	10	1.531190
chr16	2154797	2155358	2155077	ENSG00000260260.1	-	lincRNA	KNOWN	SNHG19	1	2	1.460678
chr16	2155023	2155105	2155064	ENSG00000206630.1	-	snoRNA	KNOWN	SNORD60	1	1	1.460678
chr16	2155025	2155104	2155064	ENSG00000281010.1	-	snoRNA	NOVEL	snoR1	1	1	1.460678
chr16	2155698	2178129	2166913	ENSG00000131653.12	+	protein_coding	KNOWN	TRAF7	7	21	1.589592
chr16	2177180	2196525	2186852	ENSG00000167971.15	-	protein_coding	KNOWN	CASKIN1	3	20	1.771710
chr16	2204248	2209416	2206832	ENSG00000167965.17	+	protein_coding	KNOWN	MLST8	35	9	1.684009
chr16	2205030	2205136	2205083	ENSG00000252958.1	-	miRNA	NOVEL	AC009065.2	1	1	1.684009
chr16	2209253	2211950	2210601	ENSG00000182685.7	-	protein_coding	KNOWN	BRICD5	4	6	1.516180
chr16	2211997	2212863	2212430	ENSG00000261532.1	+	lincRNA	KNOWN	RP11-304L19.8	1	2	1.452007
chr16	2211997	2214807	2213402	ENSG00000184207.8	-	protein_coding	KNOWN	PGP	2	2	1.452007
chr16	2223566	2235742	2229654	ENSG00000167967.15	+	protein_coding	KNOWN	E4F1	9	14	1.609488
chr16	2235689	2236913	2236301	ENSG00000259780.3	-	lincRNA	KNOWN	RP11-304L19.12	1	1	1.785889
chr16	2235816	2238711	2237263	ENSG00000167968.12	+	protein_coding	KNOWN	DNASE1L2	6	8	1.785889
chr16	2239395	2252300	2245847	ENSG00000167969.12	-	protein_coding	KNOWN	ECI1	7	7	1.703345
chr16	2240487	2241818	2241152	ENSG00000261663.1	+	antisense	KNOWN	RP11-304L19.11	1	2	1.785889
chr16	2253116	2268412	2260764	ENSG00000205937.11	-	protein_coding	KNOWN	RNPS1	26	9	1.322946
chr16	2253737	2262342	2258039	ENSG00000279473.1	+	protein_coding	KNOWN	AC009065.4	1	3	1.322946
chr16	2267787	2267880	2267833	ENSG00000207715.1	-	miRNA	NOVEL	AC009065.1	1	1	1.322946
chr16	2268155	2273418	2270786	ENSG00000260778.3	+	lincRNA	KNOWN	RP11-304L19.13	3	3	1.257060
chr16	2270713	2270772	2270742	ENSG00000266643.1	+	miRNA	KNOWN	MIR3677	1	1	1.221525
chr16	2271737	2271846	2271791	ENSG00000274753.1	+	miRNA	KNOWN	MIR940	1	1	1.221525
chr16	2274620	2274691	2274655	ENSG00000264004.1	+	miRNA	KNOWN	MIR4717	1	1	1.221525
chr16	2275881	2340746	2308313	ENSG00000167972.13	-	protein_coding	KNOWN	ABCA3	6	33	1.097391
chr16	2332313	2332732	2332522	ENSG00000243445.1	-	processed_pseudogene	KNOWN	RP11-715J22.1	1	1	0.728244
chr16	2339150	2426699	2382924	ENSG00000238098.8	+	unitary_pseudogene	KNOWN	ABCA17P	6	18	0.734857
chr16	2429394	2458854	2444124	ENSG00000162063.12	+	protein_coding	KNOWN	CCNF	5	17	1.133879
chr16	2452581	2452977	2452779	ENSG00000260095.1	-	antisense	KNOWN	RP11-715J22.3	1	1	1.197485
chr16	2456252	2459979	2458115	ENSG00000260874.5	-	lincRNA	KNOWN	RP11-715J22.4	2	5	1.197485
chr16	2460080	2464963	2462521	ENSG00000162062.14	+	protein_coding	KNOWN	C16orf59	13	10	1.197485
chr16	2463967	2464038	2464002	ENSG00000274805.1	+	miRNA	KNOWN	MIR6768	1	1	1.197485
chr16	2464950	2468213	2466581	ENSG00000259895.1	-	antisense	KNOWN	RP11-715J22.2	1	1	1.197485
chr16	2471499	2474145	2472822	ENSG00000162068.1	+	protein_coding	KNOWN	NTN3	1	6	1.479596
chr16	2475118	2505734	2490426	ENSG00000162065.11	+	protein_coding	KNOWN	TBC1D24	8	8	1.389090
chr16	2476558	2482173	2479365	ENSG00000260293.2	+	sense_intronic	KNOWN	RP11-715J22.6	1	1	1.479596
chr16	2496032	2520218	2508125	ENSG00000260272.1	+	protein_coding	KNOWN	RP11-20I23.1	1	3	1.392208
chr16	2513870	2520218	2517044	ENSG00000185883.11	+	protein_coding	KNOWN	ATP6V0C	4	3	1.513456
chr16	2513965	2527955	2520960	ENSG00000259784.1	+	protein_coding	KNOWN	RP11-20I23.3	1	4	1.513456
chr16	2516658	2517999	2517328	ENSG00000279520.1	+	TEC	KNOWN	RP11-20I23.2	1	1	1.513456
chr16	2520357	2531422	2525889	ENSG00000162066.14	+	protein_coding	KNOWN	AMDHD2	18	11	1.506042
chr16	2530035	2531417	2530726	ENSG00000205923.3	-	protein_coding	KNOWN	CEMP1	2	2	1.455804
chr16	2531922	2532005	2531963	ENSG00000266232.1	-	miRNA	KNOWN	MIR3178	1	1	1.455804
chr16	2537964	2603188	2570576	ENSG00000140992.18	+	protein_coding	KNOWN	PDPK1	17	14	1.145378
chr16	2554060	2556060	2555060	ENSG00000261613.2	-	antisense	KNOWN	RP11-20I23.13	1	1	1.023097
chr16	2554975	2556105	2555540	ENSG00000261288.1	+	sense_intronic	KNOWN	RP11-20I23.11	1	2	1.023097
chr16	2561471	2565096	2563283	ENSG00000269937.1	-	antisense	KNOWN	RP11-20I23.8	1	1	1.023097
chr16	2569043	2571936	2570489	ENSG00000261140.1	-	antisense	KNOWN	RP11-20I23.6	1	2	1.041151
chr16	2571570	2572353	2571961	ENSG00000260436.1	-	antisense	KNOWN	RP11-20I23.7	1	2	1.050061
chr16	2575628	2577373	2576500	ENSG00000279568.1	-	TEC	KNOWN	RP11-20I23.5	1	1	1.050061
chr16	2578395	2579963	2579179	ENSG00000280402.1	+	TEC	KNOWN	RP11-20I23.10	1	1	1.050061
chr16	2592514	2594563	2593538	ENSG00000279162.1	+	TEC	KNOWN	CTD-3126B10.2	1	1	1.192080
chr16	2597881	2599718	2598799	ENSG00000261093.1	-	antisense	KNOWN	CTD-3126B10.1	1	1	1.192080
chr16	2603350	2630494	2616922	ENSG00000215154.6	+	transcribed_unprocessed_pseudogene	KNOWN	AC141586.5	3	4	1.192875
chr16	2616121	2643296	2629708	ENSG00000205918.9	-	transcribed_unprocessed_pseudogene	KNOWN	PDPK2P	3	9	1.146990
chr16	2620222	2621794	2621008	ENSG00000279057.1	-	TEC	KNOWN	CTD-3126B10.5	1	1	1.195529
chr16	2644084	2645214	2644649	ENSG00000260176.1	-	lincRNA	KNOWN	CTD-3126B10.4	1	2	1.096331
chr16	2660349	2673444	2666896	ENSG00000260565.6	-	processed_transcript	KNOWN	CTD-2270P14.1	8	4	0.957104
chr16	2682475	2709030	2695752	ENSG00000167977.8	+	protein_coding	KNOWN	KCTD5	5	6	1.015975
chr16	2683106	2684764	2683935	ENSG00000279901.1	+	TEC	KNOWN	CTD-2270P14.2	1	1	0.871527
chr16	2712418	2720551	2716484	ENSG00000172382.9	-	protein_coding	KNOWN	PRSS27	5	6	1.366999
chr16	2713019	2713100	2713059	ENSG00000222055.1	+	miRNA	NOVEL	AC092117.1	1	1	1.366999
chr16	2737076	2752600	2744838	ENSG00000205913.6	-	antisense	KNOWN	SRRM2-AS1	5	6	1.237153
chr16	2752329	2772538	2762433	ENSG00000167978.16	+	protein_coding	KNOWN	SRRM2	31	15	1.255724
chr16	2769872	2769949	2769910	ENSG00000265864.1	+	miRNA	NOVEL	AC092117.2	1	1	1.261917
chr16	2771414	2777297	2774355	ENSG00000103363.14	-	protein_coding	KNOWN	TCEB2	5	5	1.212622
chr16	2777319	2780568	2778943	ENSG00000276791.1	+	lincRNA	KNOWN	CTD-2270P14.5	1	1	1.212622
chr16	2783953	2787948	2785950	ENSG00000103355.12	-	protein_coding	KNOWN	PRSS33	5	7	1.212622
chr16	2796408	2796532	2796470	ENSG00000221719.1	-	snoRNA	NOVEL	SNORA3	1	1	0.964987
chr16	2798485	2805132	2801808	ENSG00000215148.7	+	transcribed_unprocessed_pseudogene	KNOWN	PRSS41	2	5	0.964987
chr16	2817180	2826304	2821742	ENSG00000007038.10	+	protein_coding	KNOWN	PRSS21	10	6	0.886131
chr16	2822659	2822993	2822826	ENSG00000262154.1	-	processed_pseudogene	KNOWN	EIF1P4	1	1	0.886131
chr16	2830169	2839585	2834877	ENSG00000162078.11	+	protein_coding	KNOWN	ZG16B	6	4	0.904789
chr16	2839568	2842744	2841156	ENSG00000172460.14	-	unitary_pseudogene	KNOWN	PRSS30P	6	5	0.904789
chr16	2852727	2858170	2855448	ENSG00000005001.9	-	protein_coding	KNOWN	PRSS22	8	6	1.015371
chr16	2857898	2859726	2858812	ENSG00000263325.1	+	antisense	KNOWN	LA16c-325D7.1	1	3	1.015371
chr16	2866348	2867618	2866983	ENSG00000263280.1	-	lincRNA	KNOWN	LA16c-325D7.2	1	2	1.015371
chr16	2883186	2899382	2891284	ENSG00000162076.12	+	protein_coding	KNOWN	FLYWCH2	5	4	1.141260
chr16	2911937	2951208	2931572	ENSG00000059122.16	+	protein_coding	KNOWN	FLYWCH1	14	10	1.154006
chr16	2922662	2923202	2922932	ENSG00000262959.2	-	processed_pseudogene	KNOWN	RPL23AP86	1	1	1.110370
chr16	2939714	2954276	2946995	ENSG00000262482.1	-	antisense	KNOWN	LA16c-321D4.2	1	3	1.235347
chr16	2963944	2968383	2966163	ENSG00000131650.13	+	protein_coding	KNOWN	KREMEN2	6	9	1.367172
chr16	2968024	2980539	2974281	ENSG00000127564.16	-	protein_coding	KNOWN	PKMYT1	20	10	1.249123
chr16	2969245	2973489	2971367	ENSG00000162073.13	+	protein_coding	KNOWN	PAQR4	5	3	1.251906
chr16	2981175	2981591	2981383	ENSG00000274367.1	-	lincRNA	KNOWN	LA16c-380H5.6	1	1	1.227003
chr16	2988256	3002016	2995136	ENSG00000270168.2	+	protein_coding	KNOWN	LA16c-380H5.3	1	35	1.311808
chr16	2988961	2994509	2991735	ENSG00000262152.6	+	processed_transcript	KNOWN	LA16c-380H5.1	3	8	1.305940
chr16	3003431	3005101	3004266	ENSG00000262362.1	-	sense_overlapping	KNOWN	LA16c-380H5.2	1	2	1.324108
chr16	3006120	3007388	3006754	ENSG00000272079.2	+	lincRNA	KNOWN	LA16c-380H5.5	1	1	1.324108
chr16	3012456	3014505	3013480	ENSG00000213937.3	+	protein_coding	KNOWN	CLDN9	1	1	1.482782
chr16	3014712	3020071	3017391	ENSG00000184697.6	-	protein_coding	KNOWN	CLDN6	3	3	1.482782
chr16	3018445	3022383	3020414	ENSG00000006327.13	+	protein_coding	KNOWN	TNFRSF12A	7	4	1.482782
chr16	3022620	3024286	3023453	ENSG00000103145.10	-	protein_coding	KNOWN	HCFC1R1	9	5	1.482782
chr16	3024027	3027755	3025891	ENSG00000131652.13	+	protein_coding	KNOWN	THOC6	10	14	1.482782
chr16	3027682	3036926	3032304	ENSG00000162069.14	-	protein_coding	KNOWN	CCDC64B	5	10	1.702519
chr16	3032481	3039133	3035807	ENSG00000205890.3	+	antisense	KNOWN	RP11-473M20.5	1	8	1.776018
chr16	3046681	3060726	3053703	ENSG00000008516.16	+	protein_coding	KNOWN	MMP25	4	10	1.508360
chr16	3051096	3059370	3055233	ENSG00000261971.6	-	antisense	KNOWN	MMP25-AS1	9	4	1.425570
chr16	3065297	3082192	3073744	ENSG00000008517.16	+	protein_coding	KNOWN	IL32	35	8	1.128229
chr16	3069523	3069651	3069587	ENSG00000252561.1	+	snRNA	KNOWN	RNU1-125P	1	1	1.425570
chr16	3076911	3087100	3082005	ENSG00000262370.5	-	lincRNA	KNOWN	RP11-473M20.9	3	5	1.013565
chr16	3086143	3086300	3086221	ENSG00000200204.1	+	snRNA	KNOWN	RNU1-22P	1	1	1.013565
chr16	3088890	3099317	3094103	ENSG00000130182.7	-	protein_coding	KNOWN	ZSCAN10	10	6	0.904655
chr16	3106764	3109576	3108170	ENSG00000263011.1	+	sense_overlapping	KNOWN	RP11-473M20.11	1	3	0.891693
chr16	3110460	3134882	3122671	ENSG00000263072.6	-	antisense	KNOWN	ZNF213-AS1	12	7	1.184267
chr16	3112560	3120517	3116538	ENSG00000122386.10	+	protein_coding	KNOWN	ZNF205	6	7	1.192792
chr16	3129777	3142805	3136291	ENSG00000085644.13	+	protein_coding	KNOWN	ZNF213	9	7	1.150881
chr16	3144219	3149963	3147091	ENSG00000228146.7	+	transcribed_unprocessed_pseudogene	KNOWN	CASP16P	4	10	1.150155
chr16	3156736	3157483	3157109	ENSG00000261889.1	-	lincRNA	KNOWN	RP11-473M20.16	1	1	1.242633
chr16	3181233	3184018	3182625	ENSG00000262521.1	-	lincRNA	KNOWN	AJ003147.8	1	2	0.949387
chr16	3188212	3224779	3206495	ENSG00000262668.1	+	antisense	KNOWN	AJ003147.9	1	4	0.854497
chr16	3204247	3205188	3204717	ENSG00000168124.2	+	protein_coding	KNOWN	OR1F1	1	1	1.078053
chr16	3215611	3216543	3216077	ENSG00000203581.7	+	unprocessed_pseudogene	KNOWN	OR1F2P	1	1	0.540513
chr16	3222325	3236221	3229273	ENSG00000010539.11	-	protein_coding	KNOWN	ZNF200	10	5	0.493693
chr16	3242028	3256627	3249327	ENSG00000103313.11	-	protein_coding	KNOWN	MEFV	15	11	0.568650
chr16	3263743	3267567	3265655	ENSG00000281005.1	+	lincRNA	KNOWN	LINC00921	2	3	0.728244
chr16	3263800	3301401	3282600	ENSG00000006194.9	+	protein_coding	KNOWN	ZNF263	8	6	0.756007
chr16	3273609	3275807	3274708	ENSG00000279330.1	+	TEC	KNOWN	AJ003147.11	1	1	0.725864
chr16	3292879	3293403	3293141	ENSG00000279031.1	+	TEC	KNOWN	LA16c-360H6.1	1	1	0.823974
chr16	3298832	3305729	3302280	ENSG00000140993.10	-	protein_coding	KNOWN	TIGD7	8	3	0.823974
chr16	3305406	3318852	3312129	ENSG00000162086.14	+	protein_coding	KNOWN	ZNF75A	10	6	0.723352
chr16	3307573	3308393	3307983	ENSG00000262899.1	-	antisense	KNOWN	LA16c-360H6.3	1	1	0.823974
chr16	3308609	3308816	3308712	ENSG00000262554.1	+	transcribed_processed_pseudogene	KNOWN	LA16c-360H6.2	1	1	0.823974
chr16	3323192	3323925	3323558	ENSG00000262316.1	-	processed_pseudogene	KNOWN	RP11-433P17.1	1	1	0.671149
chr16	3355889	3357294	3356591	ENSG00000168158.3	+	protein_coding	KNOWN	OR2C1	1	1	0.418694
chr16	3365099	3479550	3422324	ENSG00000262621.4	+	protein_coding	KNOWN	LA16c-306E5.2	3	5	0.531584
chr16	3367719	3369246	3368482	ENSG00000262118.1	-	processed_pseudogene	KNOWN	MTCO1P28	1	1	0.418694
chr16	3369957	3370906	3370431	ENSG00000263177.1	-	processed_pseudogene	KNOWN	MTND1P8	1	1	0.361627
chr16	3370979	3372740	3371859	ENSG00000232196.3	-	protein_coding	KNOWN	MTRNR2L4	1	1	0.358984
chr16	3382081	3401065	3391573	ENSG00000140987.19	-	protein_coding	KNOWN	ZSCAN32	15	7	0.508342
chr16	3401235	3409370	3405302	ENSG00000103343.12	+	protein_coding	KNOWN	ZNF174	5	4	0.615211
chr16	3432422	3443542	3437982	ENSG00000167981.5	-	protein_coding	KNOWN	ZNF597	1	4	0.329789
chr16	3443611	3486963	3465287	ENSG00000122390.17	+	protein_coding	KNOWN	NAA60	37	8	0.725446
chr16	3458071	3515564	3486817	ENSG00000263212.2	+	processed_transcript	KNOWN	LA16c-306E5.3	1	5	0.908762
chr16	3485381	3485469	3485425	ENSG00000273776.1	-	miRNA	KNOWN	MIR6126	1	1	0.836995
chr16	3493484	3495480	3494482	ENSG00000215131.10	-	protein_coding	KNOWN	C16orf90	2	3	1.102408
chr16	3496201	3496768	3496484	ENSG00000240311.1	+	processed_pseudogene	KNOWN	LA16c-306E5.1	1	1	1.102408
chr16	3500924	3539048	3519986	ENSG00000103351.12	+	protein_coding	KNOWN	CLUAP1	12	13	0.819710
chr16	3533429	3534258	3533843	ENSG00000278942.1	-	TEC	KNOWN	LA16c-390H2.1	1	1	0.589491
chr16	3539033	3577400	3558216	ENSG00000167984.16	-	protein_coding	KNOWN	NLRC3	6	21	0.899643
chr16	3542739	3545785	3544262	ENSG00000262312.2	+	antisense	KNOWN	LA16c-390H2.4	2	2	0.589491
chr16	3581181	3583266	3582223	ENSG00000261938.1	+	lincRNA	KNOWN	RP11-461A8.1	1	2	1.097063
chr16	3581181	3611598	3596389	ENSG00000188827.10	-	protein_coding	KNOWN	SLX4	3	15	0.882318
chr16	3611728	3680143	3645935	ENSG00000213918.10	+	protein_coding	KNOWN	DNASE1	14	12	0.779542
chr16	3650636	3651703	3651169	ENSG00000263235.1	-	sense_overlapping	KNOWN	RP11-461A8.4	1	1	1.026104
chr16	3651639	3717597	3684618	ENSG00000126602.10	-	protein_coding	KNOWN	TRAP1	17	18	0.954200
chr16	3686998	3687380	3687189	ENSG00000276754.1	+	antisense	KNOWN	RP11-461A8.5	1	1	0.900460
chr16	3725054	3880726	3802890	ENSG00000005339.13	-	protein_coding	KNOWN	CREBBP	13	31	0.713137
chr16	3840528	3841010	3840769	ENSG00000262516.1	+	processed_pseudogene	KNOWN	RP11-95J11.1	1	1	0.864363
chr16	3931217	3946305	3938761	ENSG00000262888.1	-	sense_overlapping	KNOWN	RP11-462G12.2	1	3	0.834604
chr16	3947609	3950444	3949026	ENSG00000262185.1	-	sense_overlapping	KNOWN	RP11-462G12.1	1	2	0.817805
chr16	3953387	4116185	4034786	ENSG00000162104.9	-	protein_coding	KNOWN	ADCY9	7	11	0.694528
chr16	4032012	4032936	4032474	ENSG00000263159.1	+	antisense	KNOWN	RP11-462G12.4	1	2	0.802485
chr16	4130555	4130820	4130687	ENSG00000262471.1	+	processed_pseudogene	KNOWN	RP11-95P2.4	1	1	0.640781
chr16	4180117	4183515	4181816	ENSG00000263105.1	-	lincRNA	KNOWN	RP11-95P2.3	1	2	0.791759
chr16	4189374	4242080	4215727	ENSG00000185739.13	-	protein_coding	KNOWN	SRL	3	7	0.920099
chr16	4245825	4253789	4249807	ENSG00000262468.5	-	lincRNA	KNOWN	LINC01569	3	4	1.090352
chr16	4257186	4273075	4265130	ENSG00000090447.11	-	protein_coding	KNOWN	TFAP4	7	7	1.065383
chr16	4314761	4339597	4327179	ENSG00000126603.8	+	protein_coding	KNOWN	GLIS2	2	8	1.302105
chr16	4324667	4328340	4326503	ENSG00000262686.1	-	lincRNA	KNOWN	GLIS2-AS1	1	4	1.031329
chr16	4331549	4355607	4343578	ENSG00000217930.7	-	protein_coding	KNOWN	PAM16	15	6	1.632891
chr16	4335870	4337818	4336844	ENSG00000262712.1	-	sense_intronic	KNOWN	RP11-295D4.1	1	1	1.731996
chr16	4340251	4420494	4380372	ENSG00000103426.12	-	protein_coding	KNOWN	CORO7-PAM16	3	33	1.245821
chr16	4346694	4348648	4347671	ENSG00000280063.1	-	TEC	KNOWN	RP11-295D4.3	1	1	1.731996
chr16	4354542	4425705	4390123	ENSG00000262246.5	-	protein_coding	KNOWN	CORO7	33	29	1.162077
chr16	4371848	4383528	4377688	ENSG00000168140.4	+	protein_coding	KNOWN	VASN	1	2	1.188500
chr16	4425805	4456775	4441290	ENSG00000103423.13	+	protein_coding	KNOWN	DNAJA3	14	12	0.868239
chr16	4426902	4427380	4427141	ENSG00000277170.1	+	sense_intronic	KNOWN	RP11-295D4.4	1	1	1.064856
chr16	4430522	4431103	4430812	ENSG00000277440.1	+	sense_intronic	KNOWN	RP11-295D4.5	1	1	0.814726
chr16	4433202	4433387	4433294	ENSG00000275515.1	-	processed_pseudogene	KNOWN	RP11-295D4.7	1	1	0.814726
chr16	4461680	4495763	4478721	ENSG00000153406.13	-	protein_coding	KNOWN	NMRAL1	18	6	0.896290
chr16	4474690	4510347	4492518	ENSG00000103415.11	+	protein_coding	KNOWN	HMOX2	18	8	0.775180
chr16	4510675	4538828	4524751	ENSG00000089486.16	-	protein_coding	KNOWN	CDIP1	14	6	0.909127
chr16	4532216	4533670	4532943	ENSG00000278434.1	-	sense_intronic	KNOWN	RP11-709D24.8	1	1	0.674434
chr16	4556490	4600714	4578602	ENSG00000205832.7	+	protein_coding	KNOWN	C16orf96	1	16	0.860606
chr16	4560001	4561662	4560831	ENSG00000261789.1	-	antisense	KNOWN	RP11-709D24.5	1	1	0.782183
chr16	4562814	4563128	4562971	ENSG00000261612.1	-	processed_pseudogene	KNOWN	SUB1P3	1	1	0.782183
chr16	4608883	4615027	4611955	ENSG00000153443.12	-	protein_coding	KNOWN	UBALD1	9	3	1.244346
chr16	4616493	4690974	4653733	ENSG00000102858.12	+	protein_coding	KNOWN	MGRN1	18	18	1.088946
chr16	4633591	4633881	4633736	ENSG00000263955.2	-	misc_RNA	KNOWN	RN7SL850P	1	1	1.016540
chr16	4634329	4640623	4637476	ENSG00000261442.1	-	antisense	KNOWN	RP11-709D24.6	1	2	1.016540
chr16	4658851	4659151	4659001	ENSG00000278700.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.884947
chr16	4671318	4671390	4671354	ENSG00000276641.1	+	miRNA	KNOWN	MIR6769A	1	1	1.250895
chr16	4693694	4695859	4694776	ENSG00000168101.14	+	protein_coding	KNOWN	NUDT16L1	5	3	1.161116
chr16	4696510	4734378	4715444	ENSG00000168096.14	-	protein_coding	KNOWN	ANKS3	30	18	0.892038
chr16	4730115	4752565	4741340	ENSG00000266994.1	-	processed_transcript	KNOWN	RP11-127I20.7	1	5	0.911033
chr16	4734272	4749396	4741834	ENSG00000166246.13	+	protein_coding	KNOWN	C16orf71	5	10	0.925342
chr16	4748239	4767624	4757931	ENSG00000103199.13	-	protein_coding	KNOWN	ZNF500	8	7	0.811519
chr16	4756338	4756633	4756485	ENSG00000276096.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.800153
chr16	4777669	4788521	4783095	ENSG00000140623.13	-	protein_coding	KNOWN	SEPT12	8	10	1.114784
chr16	4788397	4796491	4792444	ENSG00000267795.5	+	protein_coding	KNOWN	SMIM22	11	6	1.008665
chr16	4795265	4796532	4795898	ENSG00000267077.1	-	antisense	KNOWN	RP11-127I20.5	1	2	0.982478
chr16	4796968	4802950	4799959	ENSG00000067836.12	-	protein_coding	KNOWN	ROGDI	16	11	0.982478
chr16	4803203	4847342	4825272	ENSG00000140632.16	-	protein_coding	KNOWN	GLYR1	13	18	0.715364
chr16	4839244	4840334	4839789	ENSG00000275056.1	-	sense_intronic	KNOWN	RP11-127I20.8	1	1	0.560231
chr16	4846665	4882360	4864512	ENSG00000118900.14	+	protein_coding	KNOWN	UBN1	9	18	0.808923
chr16	4882507	4960741	4921624	ENSG00000118898.15	-	protein_coding	KNOWN	PPL	6	22	0.961995
chr16	4951773	4951891	4951832	ENSG00000281522.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.907567
chr16	4958317	5019158	4988737	ENSG00000103184.11	+	protein_coding	KNOWN	SEC14L5	2	16	0.775450
chr16	5010909	5043999	5027454	ENSG00000267072.2	+	lincRNA	KNOWN	RP11-165E7.1	2	2	0.649419
chr16	5024844	5034141	5029492	ENSG00000103174.11	-	protein_coding	KNOWN	NAGPA	17	11	0.646348
chr16	5033960	5087379	5060669	ENSG00000033011.11	+	protein_coding	KNOWN	ALG1	8	14	0.593119
chr16	5044122	5066110	5055116	ENSG00000153446.15	-	protein_coding	KNOWN	C16orf89	6	9	0.575558
chr16	5078168	5078605	5078386	ENSG00000260882.1	-	processed_pseudogene	KNOWN	RP11-10K17.3	1	1	0.632100
chr16	5084304	5097808	5091056	ENSG00000118894.14	-	protein_coding	KNOWN	EEF2KMT	9	8	0.869407
chr16	5098739	5142595	5120667	ENSG00000267070.1	+	lincRNA	KNOWN	RP11-10K17.6	1	4	0.386848
chr16	5110793	5148685	5129739	ENSG00000273963.1	-	unprocessed_pseudogene	KNOWN	ENPP7P14	1	3	0.192564
chr16	5207088	5207439	5207263	ENSG00000260431.2	+	processed_pseudogene	KNOWN	RP11-382N13.6	1	1	0.244801
chr16	5215394	5220594	5217994	ENSG00000261811.1	-	lincRNA	KNOWN	RP11-382N13.2	1	3	0.484309
chr16	5239802	6776014	6007908	ENSG00000279877.1	+	processed_transcript	KNOWN	RP11-420N3.3	1	7	0.050335
chr16	5239815	5600151	5419983	ENSG00000260411.4	+	lincRNA	KNOWN	RP11-420N3.2	1	3	0.235438
chr16	5260686	5261043	5260864	ENSG00000260817.2	-	processed_pseudogene	KNOWN	RP11-382N13.4	1	1	0.382248
chr16	5263223	5263371	5263297	ENSG00000221809.1	-	miRNA	NOVEL	AC074051.1	1	1	0.382248
chr16	5270174	5270954	5270564	ENSG00000242278.1	+	processed_pseudogene	KNOWN	RP11-382N13.1	1	1	0.055832
chr16	5289200	5289409	5289304	ENSG00000267182.1	-	processed_pseudogene	KNOWN	SNRPCP20	1	1	0.055832
chr16	5365797	5366688	5366242	ENSG00000261007.2	+	processed_pseudogene	KNOWN	RP11-382N13.3	1	1	0.270698
chr16	5369821	5369915	5369868	ENSG00000275398.1	-	miRNA	NOVEL	AC074051.2	1	1	0.270698
chr16	5601169	5616196	5608682	ENSG00000260338.1	-	antisense	KNOWN	LINC01570	2	3	0.259787
chr16	5632467	5632566	5632516	ENSG00000273648.1	+	miRNA	KNOWN	MIR8065	1	1	-0.009546
chr16	5760687	5760788	5760737	ENSG00000221257.1	-	miRNA	NOVEL	AC012175.1	1	1	-0.043236
chr16	5838131	5838661	5838396	ENSG00000270440.1	-	processed_pseudogene	KNOWN	RP11-19H6.1	1	1	0.076885
chr16	6019094	7713338	6866216	ENSG00000078328.19	+	protein_coding	KNOWN	RBFOX1	21	17	-0.027437
chr16	6037210	6038977	6038093	ENSG00000280000.1	+	TEC	KNOWN	RP11-509E10.3	1	1	0.228728
chr16	6056975	6092954	6074964	ENSG00000257180.1	+	sense_intronic	KNOWN	RP11-509E10.1	1	4	-0.056335
chr16	6573767	6577359	6575563	ENSG00000260835.1	+	sense_intronic	KNOWN	RP11-468I15.1	1	2	0.017567
chr16	6703883	6705558	6704720	ENSG00000278975.1	+	TEC	KNOWN	RP11-185J20.1	1	1	-0.208762
chr16	6721786	6721960	6721873	ENSG00000259963.1	+	processed_pseudogene	KNOWN	RP11-185J20.2	1	1	0.057016
chr16	6748908	6748969	6748938	ENSG00000252080.1	+	snRNA	KNOWN	RNU7-99P	1	1	-0.076827
chr16	6873899	6874005	6873952	ENSG00000200869.1	+	snRNA	KNOWN	RNU6-457P	1	1	0.137506
chr16	7004007	7004112	7004059	ENSG00000212189.1	-	snRNA	KNOWN	RNU6-328P	1	1	-0.157368
chr16	7126293	7126639	7126466	ENSG00000240419.1	-	processed_pseudogene	KNOWN	RP11-545E8.1	1	1	-0.200189
chr16	7614230	7614992	7614611	ENSG00000261198.1	-	antisense	KNOWN	RP11-26O3.1	1	2	-0.131841
chr16	7726841	7726951	7726896	ENSG00000252138.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.013718
chr16	7888489	7894395	7891442	ENSG00000260289.1	-	lincRNA	KNOWN	CTD-2535I10.1	1	2	-0.145022
chr16	7899338	7899431	7899384	ENSG00000222109.1	-	miRNA	NOVEL	AC093515.1	1	1	-0.137209
chr16	8276263	8295700	8285981	ENSG00000260003.1	-	lincRNA	KNOWN	RP11-279O17.2	1	5	-0.104984
chr16	8298492	8299772	8299132	ENSG00000261319.1	+	lincRNA	KNOWN	RP11-279O17.1	1	1	-0.148367
chr16	8309539	8309657	8309598	ENSG00000264844.1	-	miRNA	NOVEL	AC018767.1	1	1	-0.148367
chr16	8309962	8357860	8333911	ENSG00000260058.1	+	lincRNA	KNOWN	RP11-279O17.3	1	4	0.067674
chr16	8369864	8376276	8373070	ENSG00000259819.1	+	lincRNA	KNOWN	RP11-568A19.1	1	3	0.125472
chr16	8508069	8508585	8508327	ENSG00000260379.1	+	processed_pseudogene	KNOWN	RP11-483K5.2	1	2	0.269779
chr16	8526549	8532013	8529281	ENSG00000261066.1	-	lincRNA	KNOWN	RP11-483K5.3	1	2	0.107951
chr16	8537605	8590193	8563899	ENSG00000232258.6	-	protein_coding	KNOWN	TMEM114	5	4	0.268345
chr16	8621683	8649654	8635668	ENSG00000067365.14	+	protein_coding	KNOWN	METTL22	18	12	0.406409
chr16	8666762	8667271	8667016	ENSG00000279357.1	+	TEC	KNOWN	RP11-475D10.4	1	1	0.334193
chr16	8674565	8784575	8729570	ENSG00000183044.11	+	protein_coding	KNOWN	ABAT	16	16	0.361423
chr16	8683254	8683551	8683402	ENSG00000243954.3	+	misc_RNA	KNOWN	RN7SL743P	1	1	0.615211
chr16	8683461	8683543	8683502	ENSG00000281170.1	+	miRNA	NOVEL	AC007224.1	1	1	0.615211
chr16	8705456	8705517	8705486	ENSG00000238417.1	-	snRNA	KNOWN	RNU7-63P	1	1	0.405746
chr16	8731416	8731559	8731487	ENSG00000260764.1	-	processed_pseudogene	KNOWN	RP11-475D10.5	1	1	0.138039
chr16	8780384	8797648	8789016	ENSG00000184857.7	-	protein_coding	KNOWN	TMEM186	2	3	0.540686
chr16	8788823	8849331	8819077	ENSG00000140650.11	+	protein_coding	KNOWN	PMM2	18	8	0.669516
chr16	8847650	8848724	8848187	ENSG00000260350.1	-	antisense	KNOWN	RP11-152P23.2	1	2	0.713912
chr16	8848105	8860456	8854280	ENSG00000260276.2	+	antisense	KNOWN	RP11-77H9.2	2	5	0.707118
chr16	8852942	8869012	8860977	ENSG00000153048.10	-	protein_coding	KNOWN	CARHSP1	20	5	0.705888
chr16	8853312	8854347	8853829	ENSG00000259939.1	+	antisense	KNOWN	RP11-77H9.5	1	2	0.705888
chr16	8869251	8870032	8869641	ENSG00000261481.1	+	antisense	KNOWN	RP11-77H9.6	1	2	0.717387
chr16	8892094	8964514	8928304	ENSG00000187555.14	-	protein_coding	KNOWN	USP7	21	32	0.600662
chr16	8962706	8966990	8964848	ENSG00000260979.1	+	lincRNA	KNOWN	RP11-77H9.8	1	2	0.643492
chr16	9068554	9072412	9070483	ENSG00000261392.1	+	lincRNA	KNOWN	RP11-473I1.6	1	3	0.558261
chr16	9091648	9121640	9106644	ENSG00000182831.11	+	protein_coding	KNOWN	C16orf72	2	4	0.509566
chr16	9104848	9113181	9109014	ENSG00000263244.2	+	3prime_overlapping_ncrna	KNOWN	RP11-473I1.9	1	1	0.512009
chr16	9105834	9107174	9106504	ENSG00000260349.1	-	antisense	KNOWN	RP11-473I1.5	1	2	0.660504
chr16	9156402	9156881	9156641	ENSG00000220793.5	-	processed_pseudogene	KNOWN	RPL21P119	1	1	0.433500
chr16	9355588	9408093	9381840	ENSG00000261617.1	+	lincRNA	KNOWN	RP11-243A14.1	1	3	0.123355
chr16	9441294	9444985	9443139	ENSG00000261397.1	-	lincRNA	KNOWN	LINC01177	1	4	-0.266056
chr16	9446010	9455505	9450757	ENSG00000261075.1	-	lincRNA	KNOWN	LINC01195	1	5	-0.180650
chr16	9466655	9517564	9492109	ENSG00000260071.1	+	lincRNA	KNOWN	RP11-418I22.2	1	6	-0.182830
chr16	9542045	9614894	9578469	ENSG00000283003.1	+	lincRNA	KNOWN	RP11-418I22.3	1	5	0.110018
chr16	9564390	9564497	9564443	ENSG00000200468.1	-	rRNA	KNOWN	RNA5SP403	1	1	0.352307
chr16	9600097	9600228	9600162	ENSG00000252927.1	+	rRNA	KNOWN	RNA5SP404	1	1	0.059570
chr16	9666885	9676843	9671864	ENSG00000260362.1	-	lincRNA	KNOWN	RP11-297M9.1	1	2	-0.108986
chr16	9753404	10182754	9968079	ENSG00000183454.14	-	protein_coding	KNOWN	GRIN2A	11	14	-0.033676
chr16	9955461	9955563	9955512	ENSG00000275533.1	-	miRNA	NOVEL	AC026423.1	1	1	0.148854
chr16	10033684	10037297	10035490	ENSG00000261810.1	+	antisense	KNOWN	RP11-895K13.2	1	2	0.389960
chr16	10111382	10112885	10112133	ENSG00000261647.1	+	processed_pseudogene	KNOWN	IMPDH1P11	1	1	0.275438
chr16	10221775	10222073	10221924	ENSG00000266439.2	-	misc_RNA	KNOWN	RN7SL493P	1	1	0.252456
chr16	10326434	10483638	10405036	ENSG00000166669.13	+	protein_coding	KNOWN	ATF7IP2	18	12	-0.056863
chr16	10351440	10352752	10352096	ENSG00000260756.1	-	lincRNA	KNOWN	RP11-609N14.1	1	1	0.376445
chr16	10445309	10449747	10447528	ENSG00000279662.1	-	TEC	KNOWN	RP11-609N14.4	1	1	-0.049736
chr16	10496272	10496374	10496323	ENSG00000199482.1	+	snRNA	KNOWN	RNU6-633P	1	1	0.070405
chr16	10514842	10528202	10521522	ENSG00000260468.1	-	lincRNA	KNOWN	LINC01290	1	2	0.159896
chr16	10528422	10580698	10554560	ENSG00000213853.9	-	protein_coding	KNOWN	EMP2	3	5	0.568669
chr16	10529440	10532082	10530761	ENSG00000256013.1	+	antisense	KNOWN	RP11-27M24.1	1	2	0.382948
chr16	10576499	10578183	10577341	ENSG00000260310.1	-	sense_intronic	KNOWN	RP11-27M24.2	1	2	0.555124
chr16	10627501	10694945	10661223	ENSG00000153060.7	-	protein_coding	KNOWN	TEKT5	3	7	0.399224
chr16	10691273	10692973	10692123	ENSG00000263279.1	+	antisense	KNOWN	RP11-109M19.1	1	2	0.363538
chr16	10718633	10719762	10719197	ENSG00000263241.1	-	unprocessed_pseudogene	KNOWN	RP11-109M19.4	1	1	-0.044427
chr16	10719833	10720015	10719924	ENSG00000262107.1	+	unprocessed_pseudogene	KNOWN	RP11-109M19.5	1	1	-0.044427
chr16	10720015	10721464	10720739	ENSG00000261904.1	-	unprocessed_pseudogene	KNOWN	MTND5P33	1	1	-0.044427
chr16	10721698	10723068	10722383	ENSG00000262322.1	-	unprocessed_pseudogene	KNOWN	MTND4P34	1	1	-0.044427
chr16	10723065	10723355	10723210	ENSG00000262259.1	-	unprocessed_pseudogene	KNOWN	MTND4LP24	1	1	-0.044427
chr16	10723424	10723766	10723595	ENSG00000263196.1	-	unprocessed_pseudogene	KNOWN	MTND3P13	1	1	-0.044427
chr16	10723836	10724617	10724226	ENSG00000262158.1	-	unprocessed_pseudogene	KNOWN	CTD-2318B16.2	1	1	-0.044427
chr16	10724620	10725296	10724958	ENSG00000262381.1	-	unprocessed_pseudogene	KNOWN	CTD-2318B16.1	1	1	-0.044427
chr16	10743786	10769351	10756568	ENSG00000103274.10	+	protein_coding	KNOWN	NUBP1	8	11	0.617608
chr16	10760919	10818794	10789856	ENSG00000166676.14	-	protein_coding	KNOWN	TVP23A	11	9	0.389490
chr16	10840384	10841544	10840964	ENSG00000262488.1	-	processed_pseudogene	KNOWN	RP11-876N24.1	1	1	0.550656
chr16	10864914	10888752	10876833	ENSG00000262151.1	-	antisense	KNOWN	RP11-876N24.2	2	2	0.370912
chr16	10877198	10932281	10904739	ENSG00000179583.17	+	protein_coding	KNOWN	CIITA	14	20	0.384849
chr16	10928891	10942460	10935675	ENSG00000182108.9	-	protein_coding	KNOWN	DEXI	3	3	0.652657
chr16	10933903	10936280	10935091	ENSG00000280153.1	+	TEC	KNOWN	RP11-876N24.3	1	1	0.659252
chr16	10934258	10934887	10934572	ENSG00000275673.1	-	sense_intronic	KNOWN	RP11-876N24.7	1	1	0.659252
chr16	10938886	10940044	10939465	ENSG00000263013.1	-	sense_intronic	KNOWN	RP11-876N24.5	1	1	0.659252
chr16	10940719	10943021	10941870	ENSG00000262222.1	+	antisense	KNOWN	RP11-876N24.4	1	2	0.659252
chr16	10944488	11182189	11063338	ENSG00000038532.14	+	protein_coding	KNOWN	CLEC16A	12	24	0.624332
chr16	11027024	11027763	11027393	ENSG00000229917.2	+	processed_pseudogene	KNOWN	RPL7P46	1	1	0.363951
chr16	11056556	11057034	11056795	ENSG00000274038.1	+	sense_intronic	KNOWN	RP11-66H6.4	1	1	0.563541
chr16	11066496	11071102	11068799	ENSG00000262020.1	-	antisense	KNOWN	RP11-66H6.3	1	3	0.582421
chr16	11196177	11224969	11210573	ENSG00000263033.2	+	lincRNA	KNOWN	RP11-396B14.2	1	3	0.808578
chr16	11242653	11243552	11243102	ENSG00000263179.1	+	processed_pseudogene	KNOWN	HNRNPCP4	1	1	0.748690
chr16	11249619	11351762	11300690	ENSG00000175643.8	+	protein_coding	KNOWN	RMI2	5	5	0.731290
chr16	11254405	11256179	11255292	ENSG00000185338.4	-	protein_coding	KNOWN	SOCS1	1	2	0.834496
chr16	11267748	11269533	11268640	ENSG00000178279.3	-	protein_coding	KNOWN	TNP2	2	2	0.834496
chr16	11273218	11273641	11273429	ENSG00000178257.3	-	protein_coding	KNOWN	PRM3	1	1	0.807819
chr16	11274113	11274236	11274174	ENSG00000212228.1	-	snoRNA	NOVEL	SNORA48	1	1	0.807819
chr16	11275639	11276480	11276059	ENSG00000122304.10	-	protein_coding	KNOWN	PRM2	2	2	0.807819
chr16	11280836	11281350	11281093	ENSG00000175646.3	-	protein_coding	KNOWN	PRM1	1	2	0.807819
chr16	11306440	11306527	11306483	ENSG00000221801.1	-	miRNA	KNOWN	MIR548H2	1	1	0.399273
chr16	11315067	11315178	11315122	ENSG00000199668.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.894185
chr16	11341809	11345211	11343510	ENSG00000263080.1	-	antisense	KNOWN	RP11-485G7.5	2	2	0.726995
chr16	11345483	11345560	11345521	ENSG00000280717.1	-	protein_coding	KNOWN	AC009121.2	1	1	0.726995
chr16	11348143	11349321	11348732	ENSG00000262703.1	-	antisense	KNOWN	RP11-485G7.6	1	2	0.726995
chr16	11348727	11348796	11348761	ENSG00000238774.1	+	miRNA	NOVEL	AC009121.1	1	1	0.726995
chr16	11359845	11523588	11441716	ENSG00000188897.8	-	protein_coding	KNOWN	CTD-3088G3.8	8	65	0.687848
chr16	11380859	11381118	11380988	ENSG00000262636.1	-	processed_pseudogene	KNOWN	CTD-3088G3.4	1	1	0.610777
chr16	11465260	11473174	11469217	ENSG00000262999.1	+	antisense	KNOWN	CTD-3088G3.6	1	3	0.734437
chr16	11547722	11636381	11592051	ENSG00000189067.12	-	protein_coding	KNOWN	LITAF	21	5	0.665802
chr16	11668414	11679159	11673786	ENSG00000184602.5	+	protein_coding	KNOWN	SNN	1	2	0.934203
chr16	11679080	11742878	11710979	ENSG00000153066.12	-	protein_coding	KNOWN	TXNDC11	9	13	0.512083
chr16	11741910	11744506	11743208	ENSG00000262420.3	+	antisense	KNOWN	RP11-490O6.2	1	1	0.261050
chr16	11750586	11797267	11773926	ENSG00000122299.11	-	protein_coding	KNOWN	ZC3H7A	17	23	0.607708
chr16	11753666	11753948	11753807	ENSG00000274505.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.732096
chr16	11797468	11798275	11797871	ENSG00000277369.1	+	lincRNA	KNOWN	RP11-486I11.2	1	1	0.754957
chr16	11819829	11828845	11824337	ENSG00000262117.5	-	lincRNA	KNOWN	BCAR4	7	4	0.798945
chr16	11833850	11851585	11842717	ENSG00000171490.12	-	protein_coding	KNOWN	RSL1D1	12	9	0.855498
chr16	11851649	11895611	11873630	ENSG00000263307.1	+	antisense	KNOWN	RP11-166B2.8	1	2	0.637259
chr16	11868128	11916082	11892105	ENSG00000103342.12	-	protein_coding	KNOWN	GSPT1	10	15	0.561374
chr16	11881075	11882569	11881822	ENSG00000261560.1	-	sense_intronic	KNOWN	RP11-166B2.3	1	1	0.580093
chr16	11903923	11904137	11904030	ENSG00000260318.1	-	processed_pseudogene	KNOWN	COX6CP1	1	1	0.519853
chr16	11908208	11908916	11908562	ENSG00000261216.1	+	antisense	KNOWN	RP11-166B2.5	1	2	0.519853
chr16	11915661	11915738	11915699	ENSG00000266163.1	-	miRNA	NOVEL	AC007216.1	1	1	0.582797
chr16	11926199	11926307	11926253	ENSG00000277458.1	+	unprocessed_pseudogene	KNOWN	RP11-166B2.9	1	1	0.582797
chr16	11927373	11976643	11952008	ENSG00000234719.8	-	protein_coding	KNOWN	RP11-166B2.1	7	8	0.678468
chr16	11965107	11968068	11966587	ENSG00000048462.10	+	protein_coding	KNOWN	TNFRSF17	3	4	0.737327
chr16	11968508	11968743	11968625	ENSG00000260224.1	-	processed_pseudogene	KNOWN	UBL5P4	1	1	0.737327
chr16	11976737	12574289	12275513	ENSG00000048471.13	+	protein_coding	KNOWN	SNX29	8	21	0.502786
chr16	11976851	11977850	11977350	ENSG00000260488.1	-	antisense	KNOWN	RP11-166B2.7	1	2	0.550656
chr16	12081237	12081902	12081569	ENSG00000241641.1	+	processed_pseudogene	KNOWN	RPS23P6	1	2	0.435136
chr16	12086746	12090302	12088524	ENSG00000175604.2	-	antisense	KNOWN	RP11-276H1.3	1	2	0.440795
chr16	12093627	12095307	12094467	ENSG00000261293.1	-	antisense	KNOWN	RP11-276H1.2	1	2	0.501554
chr16	12297197	12297323	12297260	ENSG00000238685.1	-	snoRNA	NOVEL	ACA64	1	1	0.315399
chr16	12366982	12372582	12369782	ENSG00000261394.1	-	antisense	KNOWN	RP11-165M1.3	1	2	0.427524
chr16	12372812	12373899	12373355	ENSG00000260723.1	+	sense_intronic	KNOWN	RP11-165M1.2	2	2	0.336879
chr16	12374355	12376032	12375193	ENSG00000278979.1	+	TEC	KNOWN	RP11-165M1.1	1	1	0.336879
chr16	12545482	12546684	12546083	ENSG00000260601.1	+	sense_intronic	KNOWN	RP11-552C15.1	1	2	0.365853
chr16	12556353	12557694	12557023	ENSG00000259876.1	-	antisense	KNOWN	CTD-3037G24.4	1	2	0.492530
chr16	12560756	12611044	12585900	ENSG00000259899.1	-	antisense	KNOWN	CTD-3037G24.3	1	2	0.392008
chr16	12614451	12614852	12614651	ENSG00000274834.1	+	lincRNA	KNOWN	CTD-3037G24.5	1	1	0.264459
chr16	12659799	12804017	12731908	ENSG00000103381.11	-	protein_coding	KNOWN	CPPED1	4	4	0.310960
chr16	12720321	12720371	12720346	ENSG00000264733.1	+	miRNA	KNOWN	MIR4718	1	1	0.407347
chr16	12745873	12757835	12751854	ENSG00000260378.1	+	antisense	KNOWN	CTD-2583P5.1	1	5	0.345170
chr16	12759282	12761162	12760222	ENSG00000261158.1	+	antisense	KNOWN	CTD-2583P5.3	1	2	0.299587
chr16	12842487	12842610	12842548	ENSG00000199474.1	-	snoRNA	NOVEL	SNORA27	1	1	0.137795
chr16	12881170	12881493	12881331	ENSG00000241932.1	+	processed_pseudogene	KNOWN	RP11-14K2.1	1	1	-0.012165
chr16	12901620	13240413	13071016	ENSG00000237515.7	+	protein_coding	KNOWN	SHISA9	4	5	0.024441
chr16	13043472	13043576	13043524	ENSG00000263984.1	+	miRNA	NOVEL	AC092380.1	1	1	0.160705
chr16	13197606	13204907	13201256	ENSG00000262116.1	-	antisense	KNOWN	AC009134.1	1	3	-0.087642
chr16	13246316	13562918	13404617	ENSG00000262801.5	+	lincRNA	KNOWN	U91319.1	2	5	-0.028055
chr16	13331368	13332583	13331975	ENSG00000262011.1	-	antisense	KNOWN	AC003009.1	1	2	0.200633
chr16	13458326	13458698	13458512	ENSG00000262235.2	+	processed_pseudogene	KNOWN	TMF1P1	1	1	-0.147079
chr16	13730137	13779760	13754948	ENSG00000262267.5	-	lincRNA	KNOWN	U95743.1	2	5	0.024001
chr16	13920157	13952345	13936251	ENSG00000175595.14	+	protein_coding	KNOWN	ERCC4	8	11	0.333944
chr16	13922332	13922679	13922505	ENSG00000242307.1	-	processed_pseudogene	KNOWN	RPS26P52	1	1	0.417310
chr16	13930677	13935635	13933156	ENSG00000262732.1	-	antisense	KNOWN	CTD-2135D7.2	2	2	0.291832
chr16	13953155	13954825	13953990	ENSG00000263234.1	+	lincRNA	KNOWN	CTD-2135D7.3	1	2	0.343217
chr16	14009280	14016016	14012648	ENSG00000262097.1	-	lincRNA	KNOWN	CTD-2135D7.5	2	3	0.521962
chr16	14018880	14021077	14019978	ENSG00000261856.1	-	lincRNA	KNOWN	CTD-2135D7.4	1	3	0.532120
chr16	14071321	14266773	14169047	ENSG00000186260.16	+	protein_coding	KNOWN	MKL2	13	17	0.135628
chr16	14150833	14153235	14152034	ENSG00000276564.1	+	lincRNA	KNOWN	CTA-276F8.1	1	1	-0.026886
chr16	14191820	14200277	14196048	ENSG00000262529.1	-	antisense	KNOWN	CTA-276F8.2	1	3	-0.138306
chr16	14200357	14200979	14200668	ENSG00000262470.2	+	processed_pseudogene	KNOWN	TVP23CP2	1	1	-0.138306
chr16	14275508	14275600	14275554	ENSG00000201075.2	+	misc_RNA	NOVEL	Y_RNA	1	1	0.374027
chr16	14301389	14326744	14314066	ENSG00000262454.2	+	lincRNA	KNOWN	MIR193BHG	5	4	0.797949
chr16	14303967	14304049	14304008	ENSG00000207639.1	+	miRNA	KNOWN	MIR193B	1	1	0.473671
chr16	14309270	14309380	14309325	ENSG00000199130.2	+	miRNA	KNOWN	MIR365A	1	1	0.473671
chr16	14363109	14370266	14366687	ENSG00000260009.1	-	lincRNA	KNOWN	RP11-65J21.1	1	2	0.798625
chr16	14408039	14418872	14413455	ENSG00000263257.1	-	lincRNA	KNOWN	RP11-65J21.4	1	3	0.634926
chr16	14435701	14632728	14534214	ENSG00000140694.16	-	protein_coding	KNOWN	PARN	15	24	0.443484
chr16	14601823	14602094	14601958	ENSG00000242430.3	-	misc_RNA	KNOWN	RN7SL694P	1	1	0.127971
chr16	14632815	14669236	14651025	ENSG00000103429.10	+	protein_coding	KNOWN	BFAR	12	8	0.619842
chr16	14643788	14643849	14643818	ENSG00000238964.1	+	snRNA	KNOWN	RNU7-125P	1	1	0.542830
chr16	14672545	14694669	14683607	ENSG00000069764.9	-	protein_coding	KNOWN	PLA2G10	2	5	0.585744
chr16	14695567	14707055	14701311	ENSG00000261523.1	-	antisense	KNOWN	RP11-82O18.2	1	3	0.527811
chr16	14708944	14765448	14737196	ENSG00000224712.11	+	protein_coding	KNOWN	NPIPA3	5	10	0.620247
chr16	14727282	14733347	14730314	ENSG00000254609.1	-	unprocessed_pseudogene	KNOWN	RP11-719K4.3	1	3	0.681578
chr16	14734685	14746177	14740431	ENSG00000261695.1	-	antisense	KNOWN	RP11-719K4.6	1	3	0.625115
chr16	14748066	14765413	14756739	ENSG00000254852.8	+	protein_coding	KNOWN	NPIPA2	3	8	0.470211
chr16	14750813	14952060	14851436	ENSG00000183426.15	+	protein_coding	KNOWN	NPIPA1	9	28	0.797894
chr16	14766402	14770075	14768238	ENSG00000255037.1	-	unprocessed_pseudogene	KNOWN	RP11-680G24.1	1	2	0.454632
chr16	14820792	14824702	14822747	ENSG00000255277.3	-	transcribed_unprocessed_pseudogene	KNOWN	ABCC6P2	2	5	0.418136
chr16	14833681	14896160	14864920	ENSG00000103512.14	+	protein_coding	KNOWN	NOMO1	8	32	0.819209
chr16	14862380	14862749	14862564	ENSG00000270734.1	-	processed_pseudogene	KNOWN	RP11-719K4.7	1	1	0.849878
chr16	14901499	14902174	14901836	ENSG00000257264.3	+	lincRNA	KNOWN	MIR3179-1	1	1	0.910926
chr16	14901508	14901591	14901549	ENSG00000274301.1	+	miRNA	KNOWN	MIR3179-1	1	1	0.910926
chr16	14907717	14907781	14907749	ENSG00000263918.1	+	miRNA	KNOWN	MIR3670-1	1	1	0.910926
chr16	14909887	14911345	14910616	ENSG00000258354.1	-	lincRNA	KNOWN	MIR3180-1	1	1	1.327239
chr16	14911220	14911313	14911266	ENSG00000265537.1	+	miRNA	KNOWN	MIR3180-1	1	1	1.361880
chr16	14911551	14935708	14923629	ENSG00000183458.13	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-958N24.1	2	31	1.364751
chr16	14915457	14915556	14915506	ENSG00000207425.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.361880
chr16	14925937	14926003	14925970	ENSG00000275259.1	+	miRNA	KNOWN	MIR6511A1	1	1	1.361880
chr16	14930820	14930879	14930849	ENSG00000278265.1	+	miRNA	KNOWN	MIR6770-1	1	1	1.374027
chr16	14953012	14953120	14953066	ENSG00000273804.1	-	unprocessed_pseudogene	KNOWN	RP11-680G24.7	1	1	0.802485
chr16	14974591	15139339	15056965	ENSG00000179889.18	+	protein_coding	KNOWN	PDXDC1	18	23	0.884602
chr16	14988259	14990160	14989209	ENSG00000261819.1	-	processed_pseudogene	KNOWN	RP11-680G24.4	1	1	0.643220
chr16	15010321	15010397	15010359	ENSG00000238728.1	-	miRNA	KNOWN	MIR1972-1	1	1	0.853986
chr16	15015828	15016390	15016109	ENSG00000275910.1	-	antisense	KNOWN	RP11-680G24.6	1	1	0.853986
chr16	15037853	15056079	15046966	ENSG00000157045.8	-	protein_coding	KNOWN	NTAN1	12	10	0.856119
chr16	15060022	15094317	15077169	ENSG00000085721.12	-	protein_coding	KNOWN	RRN3	6	19	0.906593
chr16	15094411	15109197	15101804	ENSG00000260735.1	+	antisense	KNOWN	RP11-72I8.1	1	4	1.021373
chr16	15104312	15123498	15113905	ENSG00000188599.17	-	transcribed_unprocessed_pseudogene	KNOWN	NPIPP1	3	9	0.948740
chr16	15104723	15131601	15118162	ENSG00000270580.5	-	processed_transcript	KNOWN	PKD1P6	2	18	0.958565
chr16	15125242	15154564	15139903	ENSG00000250251.6	-	transcribed_unprocessed_pseudogene	KNOWN	PKD1P6	6	24	1.193998
chr16	15130078	15130137	15130107	ENSG00000277652.1	-	miRNA	NOVEL	AC139256.1	1	1	1.256379
chr16	15134066	15134150	15134108	ENSG00000275105.1	-	miRNA	KNOWN	MIR6511B2	1	1	1.256379
chr16	15150697	15150796	15150746	ENSG00000207294.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.208158
chr16	15154850	15155002	15154926	ENSG00000264115.1	-	miRNA	KNOWN	MIR3180-4	1	1	1.208158
chr16	15154903	15157020	15155961	ENSG00000257391.1	+	lincRNA	KNOWN	MIR3180-4	1	1	1.208158
chr16	15158457	15158521	15158489	ENSG00000264182.1	-	miRNA	NOVEL	AC126763.1	1	1	1.208158
chr16	15358978	15362674	15360826	ENSG00000277770.1	+	unprocessed_pseudogene	KNOWN	RP11-72I8.2	1	2	0.486132
chr16	15363624	15381047	15372335	ENSG00000183793.13	-	protein_coding	KNOWN	NPIPA5	3	8	0.679375
chr16	15395754	15413268	15404511	ENSG00000156968.8	+	protein_coding	KNOWN	MPV17L	3	5	0.599229
chr16	15395754	15515348	15455551	ENSG00000261130.5	+	protein_coding	KNOWN	RP11-1021N1.1	3	4	0.688057
chr16	15434295	15625028	15529661	ENSG00000166780.10	+	protein_coding	KNOWN	C16orf45	11	6	0.773175
chr16	15594386	15643166	15618776	ENSG00000166783.19	-	protein_coding	KNOWN	KIAA0430	15	27	0.916495
chr16	15608474	15610563	15609518	ENSG00000257769.1	+	antisense	KNOWN	CTB-193M12.1	1	2	0.938506
chr16	15611030	15611095	15611062	ENSG00000275184.1	-	miRNA	KNOWN	MIR6506	1	1	0.810810
chr16	15643267	15726353	15684810	ENSG00000072864.12	+	protein_coding	KNOWN	NDE1	13	10	0.913190
chr16	15643281	15643390	15643335	ENSG00000272213.2	+	miRNA	KNOWN	MIR484	1	1	0.994924
chr16	15683290	15684570	15683930	ENSG00000262380.1	+	sense_intronic	KNOWN	CTB-193M12.3	1	2	0.754491
chr16	15701237	15702118	15701677	ENSG00000280206.1	+	lincRNA	KNOWN	CTB-193M12.5	1	1	0.811255
chr16	15703135	15857033	15780084	ENSG00000133392.16	-	protein_coding	KNOWN	MYH11	12	44	0.833957
chr16	15726674	15732993	15729833	ENSG00000263335.1	+	antisense	KNOWN	AF001548.5	1	2	0.913873
chr16	15741151	15741791	15741471	ENSG00000263065.1	+	antisense	KNOWN	AF001548.6	1	2	0.799312
chr16	15790975	15792717	15791846	ENSG00000280429.1	-	TEC	KNOWN	AF001548.3	1	1	0.602529
chr16	15865720	15888625	15877172	ENSG00000133393.12	-	protein_coding	KNOWN	FOPNL	9	6	0.560265
chr16	15877163	15877266	15877214	ENSG00000206778.1	-	snRNA	KNOWN	RNU6-213P	1	1	0.511076
chr16	15885029	15886158	15885593	ENSG00000262171.1	+	antisense	KNOWN	CTA-972D3.2	1	2	0.511076
chr16	15931697	15932294	15931995	ENSG00000215003.4	-	processed_pseudogene	KNOWN	RPL15P20	1	1	0.660835
chr16	15949577	16143074	16046325	ENSG00000103222.18	+	protein_coding	KNOWN	ABCC1	8	32	0.966353
chr16	16094192	16095209	16094700	ENSG00000241067.2	-	processed_pseudogene	KNOWN	RPL17P40	1	2	0.805111
chr16	16148928	16223522	16186225	ENSG00000091262.14	-	protein_coding	KNOWN	ABCC6	8	31	0.920533
chr16	16223027	16224261	16223644	ENSG00000262332.1	+	antisense	KNOWN	RP11-517A5.7	1	2	0.846581
chr16	16232495	16294814	16263654	ENSG00000103226.17	+	protein_coding	KNOWN	NOMO3	17	32	0.930730
chr16	16260866	16261235	16261050	ENSG00000263029.1	-	processed_pseudogene	KNOWN	RP11-517A5.6	1	1	1.041008
chr16	16290135	16292242	16291188	ENSG00000262848.1	-	antisense	KNOWN	RP11-517A5.5	1	2	0.896596
chr16	16300159	16300242	16300200	ENSG00000257381.3	+	miRNA	KNOWN	MIR3179-2	1	1	0.896596
chr16	16306370	16306434	16306402	ENSG00000264722.1	+	miRNA	KNOWN	MIR3670-2	1	1	0.896596
chr16	16308542	16310000	16309271	ENSG00000257366.1	-	lincRNA	KNOWN	MIR3180-2	1	1	0.897056
chr16	16309875	16309968	16309921	ENSG00000265373.1	+	miRNA	KNOWN	MIR3180-2	1	1	0.896596
chr16	16310341	16334190	16322265	ENSG00000244257.5	+	unprocessed_pseudogene	KNOWN	PKD1P1	1	32	1.492283
chr16	16314112	16314211	16314161	ENSG00000206706.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.567077
chr16	16317444	16350590	16334017	ENSG00000183889.12	+	protein_coding	KNOWN	AC138969.4	13	25	1.301128
chr16	16324588	16324654	16324621	ENSG00000278221.1	+	miRNA	KNOWN	MIR6511A2	1	1	1.567077
chr16	16329305	16329364	16329334	ENSG00000277698.1	+	miRNA	KNOWN	MIR6770-2	1	1	1.567077
chr16	16351545	16351653	16351599	ENSG00000277920.1	-	unprocessed_pseudogene	KNOWN	RP11-958N24.4	1	1	1.054711
chr16	16356224	16377507	16366865	ENSG00000227827.3	+	unprocessed_pseudogene	KNOWN	RP11-958N24.2	1	31	1.152983
chr16	16368876	16368942	16368909	ENSG00000276311.1	+	miRNA	KNOWN	MIR6511A3	1	1	1.054711
chr16	16372604	16372663	16372633	ENSG00000277330.1	+	miRNA	NOVEL	AC138969.1	1	1	1.333284
chr16	16379055	16393954	16386504	ENSG00000214967.5	+	protein_coding	KNOWN	NPIPA7	2	8	1.142620
chr16	16394912	16398594	16396753	ENSG00000261181.1	-	unprocessed_pseudogene	KNOWN	RP11-467M13.2	1	2	0.615027
chr16	16541217	16541847	16541532	ENSG00000261362.1	-	processed_pseudogene	KNOWN	RP11-467M13.3	1	1	0.091992
chr16	16658227	16664135	16661181	ENSG00000260126.1	+	lincRNA	KNOWN	RP11-14N9.2	1	3	0.142618
chr16	16709402	16709528	16709465	ENSG00000280488.1	-	miRNA	NOVEL	AC092326.1	1	1	-0.279606
chr16	16760905	16762465	16761685	ENSG00000279729.1	+	TEC	KNOWN	RP11-14N9.1	1	1	0.030216
chr16	16952502	16953468	16952985	ENSG00000261748.1	-	processed_pseudogene	KNOWN	RP11-419L9.1	1	1	0.163545
chr16	17082295	17085049	17083672	ENSG00000279490.1	-	TEC	KNOWN	CTD-2576D5.1	1	1	0.138285
chr16	17094351	17094927	17094639	ENSG00000260675.1	-	unprocessed_pseudogene	KNOWN	CTD-2576D5.3	1	2	0.173606
chr16	17096202	17096421	17096311	ENSG00000260405.1	-	processed_pseudogene	KNOWN	CTD-2576D5.2	1	1	0.173606
chr16	17101769	17470881	17286325	ENSG00000103489.11	-	protein_coding	KNOWN	XYLT1	4	12	0.630459
chr16	17134504	17138736	17136620	ENSG00000261448.1	+	antisense	KNOWN	CTD-2576D5.4	1	3	0.518051
chr16	17192863	17194232	17193547	ENSG00000279410.1	-	TEC	KNOWN	RP11-1102P22.3	1	1	0.802996
chr16	17227023	17228000	17227511	ENSG00000279415.1	-	TEC	KNOWN	RP11-1102P22.1	1	1	0.564626
chr16	17249674	17251395	17250534	ENSG00000279620.1	-	TEC	KNOWN	RP11-1102P22.2	1	1	0.633147
chr16	17445825	17446380	17446102	ENSG00000275927.1	-	sense_intronic	KNOWN	RP11-567P19.1	1	1	0.644893
chr16	17540331	17540985	17540658	ENSG00000260945.1	-	lincRNA	KNOWN	RP11-916L7.1	1	2	0.879583
chr16	17825252	17826906	17826079	ENSG00000261555.1	+	lincRNA	KNOWN	CTD-3229J4.1	1	1	-0.093120
chr16	17932720	17933275	17932997	ENSG00000228071.4	+	processed_pseudogene	KNOWN	RPL7P47	1	1	0.011373
chr16	17933189	18151595	18042392	ENSG00000259929.5	-	lincRNA	KNOWN	CTA-481E9.4	2	4	0.180225
chr16	17961597	17962370	17961983	ENSG00000280283.1	+	TEC	KNOWN	CTA-481E9.2	1	1	0.481034
chr16	18002806	18173063	18087934	ENSG00000260242.1	-	lincRNA	KNOWN	CTA-481E9.3	1	2	0.158337
chr16	18170356	18170959	18170657	ENSG00000260933.1	+	processed_pseudogene	KNOWN	RP11-164A6.1	1	1	-0.101888
chr16	18201501	18201956	18201728	ENSG00000278994.1	+	TEC	KNOWN	CTD-2036A2.1	1	1	0.342886
chr16	18263636	18263756	18263696	ENSG00000281558.1	-	miRNA	NOVEL	AC126755.3	1	1	0.469967
chr16	18313294	18316984	18315139	ENSG00000276484.1	+	unprocessed_pseudogene	KNOWN	RP11-1212A22.7	1	2	0.541206
chr16	18317942	18336736	18327339	ENSG00000214940.8	-	protein_coding	KNOWN	NPIPA8	3	10	0.700128
chr16	18334400	18352476	18343438	ENSG00000205746.9	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-1212A22.1	6	31	1.004741
chr16	18339244	18339303	18339273	ENSG00000275085.1	-	miRNA	NOVEL	AC126755.1	1	1	0.984546
chr16	18344013	18344079	18344046	ENSG00000273613.1	-	miRNA	KNOWN	MIR6511A4	1	1	0.984546
chr16	18357026	18357136	18357081	ENSG00000277647.1	+	unprocessed_pseudogene	KNOWN	RP11-1212A22.8	1	1	1.131918
chr16	18358086	18379331	18368708	ENSG00000233024.7	-	protein_coding	KNOWN	RP11-1212A22.4	9	10	1.105896
chr16	18374521	18401940	18388230	ENSG00000254681.6	-	transcribed_unprocessed_pseudogene	KNOWN	PKD1P5	6	32	1.240393
chr16	18379351	18379410	18379380	ENSG00000275391.1	-	miRNA	KNOWN	MIR6770-3	1	1	1.072678
chr16	18383230	18383314	18383272	ENSG00000278675.1	-	miRNA	NOVEL	AC126755.2	1	1	1.072678
chr16	18397937	18398036	18397986	ENSG00000206927.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.457786
chr16	18402146	18403604	18402875	ENSG00000257563.1	+	lincRNA	KNOWN	MIR3180-3	1	1	1.457786
chr16	18402178	18402271	18402224	ENSG00000266291.1	-	miRNA	KNOWN	MIR3180-3	1	1	1.457786
chr16	18405698	18405762	18405730	ENSG00000265776.1	-	miRNA	KNOWN	MIR3670-3	1	1	1.457786
chr16	18411309	18411851	18411580	ENSG00000257527.1	-	lincRNA	KNOWN	MIR3179-3	1	1	1.311499
chr16	18411894	18411977	18411935	ENSG00000266454.1	-	miRNA	KNOWN	MIR3179-3	1	1	1.311499
chr16	18417325	18562211	18489768	ENSG00000185164.14	-	protein_coding	KNOWN	NOMO2	12	32	0.592919
chr16	18488301	18488365	18488333	ENSG00000274025.1	-	miRNA	KNOWN	MIR3670-4	1	1	0.000000
chr16	18494493	18494576	18494534	ENSG00000277014.1	-	miRNA	KNOWN	MIR3179-4	1	1	0.951293
chr16	18533418	18533817	18533617	ENSG00000262974.1	+	processed_pseudogene	KNOWN	RP11-457I16.4	1	1	0.734902
chr16	18570448	18571683	18571065	ENSG00000260550.2	-	lincRNA	KNOWN	RP11-457I16.2	2	2	0.682535
chr16	18571162	18598328	18584745	ENSG00000256340.8	+	transcribed_unprocessed_pseudogene	KNOWN	ABCC6P1	4	11	0.592436
chr16	18649699	18649825	18649762	ENSG00000281585.1	+	miRNA	NOVEL	AC138811.1	1	1	0.037800
chr16	18781295	18790383	18785839	ENSG00000134419.15	-	protein_coding	KNOWN	RPS15A	13	6	0.665908
chr16	18788063	18801519	18794791	ENSG00000260342.2	-	protein_coding	KNOWN	RP11-1035H13.3	1	7	0.616121
chr16	18791667	18801678	18796672	ENSG00000170540.14	-	protein_coding	KNOWN	ARL6IP1	8	6	0.607320
chr16	18803083	18812181	18807632	ENSG00000260017.1	+	antisense	KNOWN	RP11-1035H13.2	1	2	0.577143
chr16	18804853	18926454	18865653	ENSG00000157106.16	-	protein_coding	KNOWN	SMG1	17	63	0.388459
chr16	18926863	18937043	18931953	ENSG00000260352.1	+	antisense	KNOWN	CTD-2288F12.1	1	2	0.447394
chr16	18930196	18930282	18930239	ENSG00000265515.1	-	miRNA	NOVEL	AC092287.1	1	1	0.513234
chr16	18983934	19063942	19023938	ENSG00000170537.12	+	protein_coding	KNOWN	TMC7	5	16	0.567378
chr16	19012157	19012263	19012210	ENSG00000207167.1	+	snRNA	KNOWN	RNU6-1340P	1	1	0.654412
chr16	19062499	19067691	19065095	ENSG00000261465.6	-	antisense	KNOWN	RP11-626G11.5	4	3	0.531691
chr16	19065991	19066694	19066342	ENSG00000261357.1	+	lincRNA	KNOWN	RP11-626G11.1	1	1	0.531691
chr16	19067599	19080095	19073847	ENSG00000167186.10	+	protein_coding	KNOWN	COQ7	11	7	0.353388
chr16	19086856	19098110	19092483	ENSG00000260430.1	+	lincRNA	KNOWN	RP11-626G11.4	1	3	0.301950
chr16	19111035	19111484	19111259	ENSG00000278389.1	-	lincRNA	KNOWN	RP11-626G11.6	1	1	0.676954
chr16	19113932	19121629	19117780	ENSG00000205730.6	+	protein_coding	KNOWN	ITPRIPL2	2	2	0.676954
chr16	19114002	19173578	19143790	ENSG00000261427.6	+	protein_coding	KNOWN	CTD-2349B8.1	2	6	0.722387
chr16	19119976	19121629	19120802	ENSG00000261759.1	-	antisense	KNOWN	RP11-626G11.3	1	2	0.676954
chr16	19167971	19268334	19218152	ENSG00000103528.16	+	protein_coding	KNOWN	SYT17	9	8	0.393607
chr16	19285739	19322145	19303942	ENSG00000261210.5	+	protein_coding	KNOWN	CLEC19A	3	4	0.426157
chr16	19285783	19310947	19298365	ENSG00000188477.12	+	sense_intronic	KNOWN	AC003003.5	2	5	0.390347
chr16	19315164	19316526	19315845	ENSG00000259871.1	+	sense_intronic	KNOWN	CTA-363E6.1	1	1	0.507029
chr16	19343647	19401693	19372670	ENSG00000259925.1	-	lincRNA	KNOWN	CTA-363E6.2	2	5	0.234741
chr16	19392213	19393468	19392840	ENSG00000280265.1	-	TEC	KNOWN	CTA-363E6.3	1	1	0.261011
chr16	19410496	19499113	19454804	ENSG00000103534.16	+	protein_coding	KNOWN	TMC5	11	22	0.261425
chr16	19410729	19411662	19411195	ENSG00000260681.1	-	antisense	KNOWN	CTA-363E6.5	1	2	0.420615
chr16	19476916	19487899	19482407	ENSG00000260592.1	-	antisense	KNOWN	CTA-363E6.6	1	3	0.253630
chr16	19498610	19498747	19498678	ENSG00000222750.1	+	snRNA	KNOWN	RNU4-46P	1	1	0.439915
chr16	19501689	19522145	19511917	ENSG00000006007.11	-	protein_coding	KNOWN	GDE1	5	6	0.404736
chr16	19501689	19502286	19501987	ENSG00000260934.1	+	antisense	KNOWN	CTA-363E6.7	1	2	0.439915
chr16	19503861	19504625	19504243	ENSG00000279747.1	+	TEC	KNOWN	CTA-363E6.8	1	1	0.439915
chr16	19523811	19553408	19538609	ENSG00000103540.16	+	protein_coding	KNOWN	CCP110	11	15	0.262854
chr16	19555240	19706793	19631016	ENSG00000103544.14	+	protein_coding	KNOWN	C16orf62	24	31	0.444817
chr16	19694035	19694428	19694231	ENSG00000276571.1	-	antisense	KNOWN	AC002550.6	1	1	0.649568
chr16	19701934	19718235	19710084	ENSG00000103550.13	-	protein_coding	KNOWN	KNOP1	5	5	0.617066
chr16	19706351	19715383	19710867	ENSG00000261312.1	+	antisense	KNOWN	AC002550.5	1	2	0.611221
chr16	19716456	19858467	19787461	ENSG00000174628.16	+	protein_coding	KNOWN	IQCK	14	10	0.391305
chr16	19761172	19766099	19763635	ENSG00000261195.1	-	antisense	KNOWN	CTD-2380F24.1	3	3	0.415568
chr16	19819504	19819628	19819566	ENSG00000261939.1	-	processed_pseudogene	KNOWN	LARP7P2	1	1	0.429387
chr16	19856691	19886167	19871429	ENSG00000167191.11	-	protein_coding	KNOWN	GPRC5B	11	4	0.169810
chr16	19890501	19890597	19890549	ENSG00000265524.1	+	miRNA	NOVEL	AC134300.1	1	1	0.386897
chr16	20031485	20073917	20052701	ENSG00000180269.7	-	protein_coding	KNOWN	GPR139	2	3	0.072805
chr16	20155648	20158391	20157019	ENSG00000277211.1	+	processed_pseudogene	KNOWN	RP11-204E4.4	1	1	0.204258
chr16	20208925	20209525	20209225	ENSG00000263253.1	+	lincRNA	KNOWN	RP11-204E4.3	1	2	-0.117236
chr16	20238972	20239247	20239109	ENSG00000227624.2	-	processed_pseudogene	KNOWN	SNRPEP3	1	1	-0.178311
chr16	20309572	20327808	20318690	ENSG00000169347.16	-	protein_coding	KNOWN	GP2	11	12	0.303878
chr16	20333052	20356301	20344676	ENSG00000169344.15	-	protein_coding	KNOWN	UMOD	13	12	0.244362
chr16	20359170	20404737	20381953	ENSG00000169340.9	-	protein_coding	KNOWN	PDILT	2	12	0.158084
chr16	20385957	20391164	20388560	ENSG00000263237.1	+	antisense	KNOWN	RP11-429K17.1	1	2	0.111862
chr16	20409534	20441336	20425435	ENSG00000183549.10	+	protein_coding	KNOWN	ACSM5	7	14	0.245422
chr16	20440266	20447000	20443633	ENSG00000262995.1	-	antisense	KNOWN	CTD-2194A8.2	2	4	0.113907
chr16	20451461	20487667	20469564	ENSG00000183747.11	+	protein_coding	KNOWN	ACSM2A	16	15	0.002619
chr16	20487702	20489659	20488680	ENSG00000280306.1	+	TEC	KNOWN	CTD-3076M17.1	1	1	-0.116595
chr16	20536226	20576427	20556326	ENSG00000066813.14	-	protein_coding	KNOWN	ACSM2B	19	15	0.085700
chr16	20580999	20586640	20583819	ENSG00000260201.2	+	lincRNA	KNOWN	RP11-143N13.2	2	3	-0.351310
chr16	20586550	20607107	20596828	ENSG00000260762.1	-	unprocessed_pseudogene	KNOWN	ACSM5P1	1	12	0.122086
chr16	20610243	20797581	20703912	ENSG00000005187.11	+	protein_coding	KNOWN	ACSM3	15	14	-0.138931
chr16	20616409	20616532	20616470	ENSG00000275315.1	-	unprocessed_pseudogene	KNOWN	RP11-143N13.4	1	1	-0.175230
chr16	20618205	20620758	20619481	ENSG00000274730.1	-	unprocessed_pseudogene	KNOWN	RP11-143N13.3	1	2	-0.175230
chr16	20623237	20698890	20661063	ENSG00000166743.9	-	protein_coding	KNOWN	ACSM1	6	14	-0.126360
chr16	20733664	20742084	20737874	ENSG00000066654.12	-	protein_coding	KNOWN	THUMPD1	5	5	-0.062894
chr16	20743663	20766620	20755141	ENSG00000260510.1	-	antisense	KNOWN	AC004381.7	1	3	0.049244
chr16	20780193	20900349	20840271	ENSG00000196678.13	-	protein_coding	KNOWN	ERI2	15	11	0.232767
chr16	20784509	20784615	20784562	ENSG00000200893.1	+	snRNA	KNOWN	RNU6-944P	1	1	-0.157986
chr16	20806429	20849668	20828048	ENSG00000005189.19	+	protein_coding	KNOWN	AC004381.6	19	20	0.088880
chr16	20823443	20823537	20823490	ENSG00000275908.1	+	snRNA	NOVEL	U4atac	1	1	0.028566
chr16	20854925	20900384	20877654	ENSG00000188215.9	-	protein_coding	KNOWN	DCUN1D3	2	3	0.532804
chr16	20899868	20925006	20912437	ENSG00000102897.9	+	protein_coding	KNOWN	LYRM1	11	6	0.696202
chr16	20933111	21159441	21046276	ENSG00000158486.13	-	protein_coding	KNOWN	DNAH3	6	62	0.214681
chr16	21120758	21130108	21125433	ENSG00000263331.1	+	antisense	KNOWN	CTC-508F8.1	1	3	0.237387
chr16	21158377	21180616	21169496	ENSG00000011638.10	+	protein_coding	KNOWN	TMEM159	9	7	0.638579
chr16	21194847	21205977	21200412	ENSG00000262983.1	+	antisense	KNOWN	AF001550.7	1	4	0.509227
chr16	21197450	21214510	21205980	ENSG00000103310.10	-	protein_coding	KNOWN	ZP2	5	20	0.487031
chr16	21233665	21253845	21243755	ENSG00000175311.6	+	protein_coding	KNOWN	ANKS4B	1	2	-0.127843
chr16	21238874	21303083	21270978	ENSG00000103316.10	-	protein_coding	KNOWN	CRYM	10	10	0.068182
chr16	21300849	21318591	21309720	ENSG00000189149.11	+	lincRNA	KNOWN	CRYM-AS1	3	3	0.199208
chr16	21347139	21352138	21349638	ENSG00000257403.2	+	unprocessed_pseudogene	KNOWN	CTD-2547E10.3	1	3	0.112450
chr16	21380173	21386064	21383118	ENSG00000158482.9	+	unprocessed_pseudogene	KNOWN	SNX29P1	1	3	1.013707
chr16	21401089	21401198	21401143	ENSG00000276548.1	+	unprocessed_pseudogene	KNOWN	CTD-2547E10.5	1	1	0.893825
chr16	21402237	21448567	21425402	ENSG00000169246.16	-	protein_coding	KNOWN	NPIPB3	14	9	0.681729
chr16	21444108	21444216	21444162	ENSG00000276555.1	-	miRNA	NOVEL	AC008740.1	1	1	0.547671
chr16	21446683	21520444	21483563	ENSG00000180747.15	-	transcribed_unprocessed_pseudogene	KNOWN	SMG1P3	6	29	0.507002
chr16	21506049	21506135	21506092	ENSG00000265462.1	-	miRNA	KNOWN	MIR3680-1	1	1	0.617083
chr16	21519830	21520365	21520097	ENSG00000258186.2	-	transcribed_processed_pseudogene	KNOWN	SLC7A5P2	1	1	0.953472
chr16	21526824	21531141	21528982	ENSG00000273956.1	-	lincRNA	KNOWN	CTB-31N19.5	1	2	0.864892
chr16	21532945	21550373	21541659	ENSG00000257639.1	-	unprocessed_pseudogene	KNOWN	CTB-31N19.2	1	5	0.622864
chr16	21538487	21538794	21538640	ENSG00000271609.1	+	processed_pseudogene	KNOWN	CTB-31N19.4	1	1	0.618621
chr16	21587627	21587864	21587745	ENSG00000252798.1	+	scaRNA	NOVEL	SCARNA6	1	1	0.456867
chr16	21597218	21657473	21627345	ENSG00000197006.13	+	protein_coding	KNOWN	METTL9	11	6	0.550207
chr16	21626742	21627569	21627155	ENSG00000261596.2	+	sense_intronic	KNOWN	CTB-31N19.3	1	1	0.578616
chr16	21639537	21652660	21646098	ENSG00000140749.8	-	protein_coding	KNOWN	IGSF6	3	6	0.540599
chr16	21642054	21642160	21642107	ENSG00000207248.1	+	snRNA	KNOWN	RNU6-1005P	1	1	0.565244
chr16	21642294	21642400	21642347	ENSG00000207042.1	+	snRNA	KNOWN	RNU6-196P	1	1	0.565244
chr16	21678514	21760729	21719621	ENSG00000155719.16	+	protein_coding	KNOWN	OTOA	7	28	0.194229
chr16	21794095	21795759	21794927	ENSG00000260306.1	-	lincRNA	KNOWN	RP11-645C24.5	1	1	0.114856
chr16	21796106	21820410	21808258	ENSG00000248124.7	-	transcribed_unprocessed_pseudogene	KNOWN	RRN3P1	4	12	0.129031
chr16	21833516	21833621	21833568	ENSG00000276721.1	+	unprocessed_pseudogene	KNOWN	RP11-645C24.6	1	1	0.663779
chr16	21834569	21880827	21857698	ENSG00000185864.16	-	protein_coding	KNOWN	NPIPB4	22	9	0.535453
chr16	21876370	21876478	21876424	ENSG00000275727.1	-	miRNA	NOVEL	AC092375.1	1	1	0.433285
chr16	21879338	21919156	21899247	ENSG00000185710.9	-	transcribed_unprocessed_pseudogene	KNOWN	SMG1P4	6	28	0.316763
chr16	21938865	21945130	21941997	ENSG00000257408.1	+	unprocessed_pseudogene	KNOWN	RP11-645C24.4	1	4	0.426030
chr16	21950218	21951708	21950963	ENSG00000274460.1	-	processed_transcript	KNOWN	CTD-2649C14.2	1	1	0.386658
chr16	21952660	21983660	21968160	ENSG00000140740.10	+	protein_coding	KNOWN	UQCRC2	13	14	0.369096
chr16	21983865	22001110	21992487	ENSG00000155714.13	-	protein_coding	KNOWN	PDZD9	3	5	0.382909
chr16	21998310	21999656	21998983	ENSG00000260395.1	+	processed_pseudogene	KNOWN	CTD-2649C14.1	1	2	0.402840
chr16	22007480	22008062	22007771	ENSG00000275445.1	-	antisense	KNOWN	CTD-2649C14.3	1	1	0.402840
chr16	22007638	22087534	22047586	ENSG00000185716.11	+	protein_coding	KNOWN	C16orf52	7	7	0.304697
chr16	22083256	22092231	22087743	ENSG00000260277.1	-	antisense	KNOWN	RP11-101E7.2	3	3	0.224956
chr16	22092538	22156966	22124752	ENSG00000175267.14	+	protein_coding	KNOWN	VWA3A	8	34	0.206125
chr16	22165583	22191754	22178668	ENSG00000183921.7	+	protein_coding	KNOWN	SDR42E2	1	12	0.406798
chr16	22206282	22288732	22247507	ENSG00000103319.11	+	protein_coding	KNOWN	EEF2K	4	18	0.658374
chr16	22286708	22288738	22287723	ENSG00000261113.1	-	antisense	KNOWN	RP11-141O15.1	3	2	0.750955
chr16	22297375	22335103	22316239	ENSG00000058600.15	+	protein_coding	KNOWN	POLR3E	19	21	0.720817
chr16	22345936	22437165	22391550	ENSG00000140743.7	-	protein_coding	KNOWN	CDR2	7	7	0.491300
chr16	22365121	22369047	22367084	ENSG00000260635.1	+	antisense	KNOWN	RP11-21M24.3	1	3	0.568178
chr16	22374859	22378180	22376519	ENSG00000260790.1	+	antisense	KNOWN	RP11-21M24.2	2	3	0.335263
chr16	22382436	22407428	22394932	ENSG00000230872.1	+	unitary_pseudogene	KNOWN	AC092338.5	1	5	0.309585
chr16	22418672	22437715	22428193	ENSG00000257122.5	-	transcribed_unprocessed_pseudogene	KNOWN	RRN3P3	2	7	0.599896
chr16	22437008	22492220	22464614	ENSG00000237296.9	+	transcribed_unprocessed_pseudogene	KNOWN	SMG1P1	7	29	0.491467
chr16	22479121	22536521	22507821	ENSG00000243716.10	+	protein_coding	KNOWN	NPIPB5	27	23	0.521413
chr16	22494687	22494795	22494741	ENSG00000276305.1	+	miRNA	NOVEL	AC106788.1	1	1	0.550506
chr16	22537478	22537584	22537531	ENSG00000277041.1	-	unprocessed_pseudogene	KNOWN	RP11-368J21.4	1	1	0.781741
chr16	22545698	22576865	22561281	ENSG00000257838.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-368J21.3	2	9	0.467005
chr16	22610531	22612196	22611363	ENSG00000260973.1	-	lincRNA	KNOWN	RP11-105C19.2	1	1	-0.021367
chr16	22612543	22613483	22613013	ENSG00000260905.1	-	lincRNA	KNOWN	RP11-105C19.1	1	2	-0.021367
chr16	22814177	22916338	22865257	ENSG00000122254.6	+	protein_coding	KNOWN	HS3ST2	2	4	-0.056775
chr16	23020337	23023611	23021974	ENSG00000261090.1	+	lincRNA	KNOWN	RP11-20G6.2	1	2	-0.228228
chr16	23061406	23064173	23062789	ENSG00000260566.2	-	3prime_overlapping_ncrna	KNOWN	RP11-20G6.3	1	1	0.069624
chr16	23061406	23149270	23105338	ENSG00000103404.14	-	protein_coding	KNOWN	USP31	3	16	0.265816
chr16	23061767	23062232	23061999	ENSG00000280400.1	+	TEC	KNOWN	RP11-20G6.1	1	1	0.069624
chr16	23182715	23216883	23199799	ENSG00000166828.2	+	protein_coding	KNOWN	SCNN1G	1	13	0.318802
chr16	23194878	23213104	23203991	ENSG00000260741.1	-	antisense	KNOWN	CTC-391G2.1	1	4	0.332174
chr16	23278231	23381299	23329765	ENSG00000168447.10	+	protein_coding	KNOWN	SCNN1B	9	14	0.383075
chr16	23388493	23453180	23420836	ENSG00000168434.12	-	protein_coding	KNOWN	COG7	6	17	0.568890
chr16	23412380	23416680	23414530	ENSG00000280039.1	+	TEC	KNOWN	RN7SKP23	1	1	0.690178
chr16	23441841	23441921	23441881	ENSG00000212593.1	+	snoRNA	NOVEL	SNORA75	1	1	0.372620
chr16	23446446	23447282	23446864	ENSG00000259782.2	-	sense_intronic	KNOWN	CTD-2270L9.2	1	1	0.372620
chr16	23452758	23457606	23455182	ENSG00000260136.5	+	lincRNA	KNOWN	CTD-2270L9.4	3	3	0.664409
chr16	23463542	23521995	23492768	ENSG00000103365.15	-	protein_coding	KNOWN	GGA2	17	17	0.630672
chr16	23500905	23501630	23501267	ENSG00000261528.2	+	processed_pseudogene	KNOWN	AC002400.1	1	1	0.501383
chr16	23522014	23557731	23539872	ENSG00000103356.15	-	protein_coding	KNOWN	EARS2	17	10	0.578036
chr16	23537061	23537556	23537308	ENSG00000260247.1	+	processed_pseudogene	KNOWN	SUB1P4	1	2	0.555559
chr16	23557362	23574389	23565875	ENSG00000103353.15	+	protein_coding	KNOWN	UBFD1	10	7	0.534962
chr16	23568673	23569696	23569184	ENSG00000260751.2	+	sense_intronic	KNOWN	CTD-2196E14.6	1	1	0.516797
chr16	23571854	23572278	23572066	ENSG00000279618.1	-	TEC	KNOWN	CTD-2196E14.7	1	1	0.587251
chr16	23581002	23596356	23588679	ENSG00000004779.9	-	protein_coding	KNOWN	NDUFAB1	5	6	0.569906
chr16	23603160	23641310	23622235	ENSG00000083093.9	-	protein_coding	KNOWN	PALB2	6	13	0.571395
chr16	23605841	23624107	23614974	ENSG00000261723.1	+	antisense	KNOWN	CTD-2196E14.3	1	4	0.641828
chr16	23641392	23677455	23659423	ENSG00000166847.9	+	protein_coding	KNOWN	DCTN5	8	6	0.538890
chr16	23670011	23675499	23672755	ENSG00000260482.3	+	3prime_overlapping_ncrna	KNOWN	CTD-2196E14.9	2	2	0.553399
chr16	23677656	23690367	23684011	ENSG00000166851.14	+	protein_coding	KNOWN	PLK1	9	10	0.560480
chr16	23687049	23687689	23687369	ENSG00000261266.2	-	antisense	KNOWN	CTD-2196E14.5	1	1	0.553399
chr16	23690309	23713500	23701904	ENSG00000134398.13	-	protein_coding	KNOWN	ERN2	8	22	0.709062
chr16	23696665	23697314	23696989	ENSG00000278912.1	-	TEC	KNOWN	CTD-2196E14.8	1	1	0.797970
chr16	23711990	23712793	23712391	ENSG00000261583.1	+	antisense	KNOWN	CTD-2385L22.1	1	2	0.209031
chr16	23753689	23755939	23754814	ENSG00000279756.1	-	TEC	KNOWN	CTD-2385L22.2	1	1	0.392746
chr16	23754627	23758951	23756789	ENSG00000166869.2	+	protein_coding	KNOWN	CHP2	1	7	0.392746
chr16	23836001	24220611	24028306	ENSG00000166501.12	+	protein_coding	KNOWN	PRKCB	10	17	0.066556
chr16	23962951	23963351	23963151	ENSG00000279276.1	+	TEC	KNOWN	CTA-345G4.1	1	1	0.010796
chr16	24098239	24099971	24099105	ENSG00000279202.1	+	TEC	KNOWN	CTA-113A6.1	1	1	-0.157787
chr16	24203116	24203231	24203173	ENSG00000274466.1	+	miRNA	KNOWN	MIR1273H	1	1	-0.102656
chr16	24208105	24208478	24208291	ENSG00000279554.1	+	TEC	KNOWN	CTA-113A6.2	1	1	-0.102656
chr16	24236104	24252863	24244483	ENSG00000260264.1	+	lincRNA	KNOWN	AC004125.3	2	4	0.194256
chr16	24255553	24362801	24309177	ENSG00000006116.3	+	protein_coding	KNOWN	CACNG3	1	4	0.061619
chr16	24333415	24333547	24333481	ENSG00000201541.1	-	snoRNA	NOVEL	SNORA1	1	1	0.083222
chr16	24400056	24400117	24400086	ENSG00000239081.1	-	snRNA	KNOWN	RNU7-24P	1	1	-0.242126
chr16	24438988	24439087	24439037	ENSG00000264465.1	+	miRNA	NOVEL	AC008938.1	1	1	0.149543
chr16	24472798	24495177	24483987	ENSG00000260072.1	-	lincRNA	KNOWN	CTD-2313J23.1	1	2	0.381984
chr16	24537693	24572863	24555278	ENSG00000122257.18	+	protein_coding	KNOWN	RBBP6	13	18	0.207143
chr16	24610266	24640957	24625611	ENSG00000259888.1	+	lincRNA	KNOWN	CTD-2540M10.1	1	2	0.323941
chr16	24661422	24671062	24666242	ENSG00000224310.1	-	lincRNA	KNOWN	LINC01567	1	3	0.537963
chr16	24729695	24827632	24778663	ENSG00000090905.17	+	protein_coding	KNOWN	TNRC6A	17	25	0.371978
chr16	24803451	24819739	24811595	ENSG00000261669.1	-	antisense	KNOWN	CTD-2515A14.1	1	2	0.317613
chr16	24845841	24911628	24878734	ENSG00000158865.12	+	protein_coding	KNOWN	SLC5A11	12	19	0.420394
chr16	24919385	25015666	24967525	ENSG00000140750.16	-	protein_coding	KNOWN	ARHGAP17	20	20	0.576034
chr16	25015978	25021023	25018500	ENSG00000260714.1	+	processed_pseudogene	KNOWN	RP11-266L9.1	1	3	0.498762
chr16	25022528	25022625	25022576	ENSG00000281675.1	-	miRNA	NOVEL	AC133552.1	1	1	0.498762
chr16	25031744	25058109	25044926	ENSG00000262587.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-266L9.4	2	2	0.550684
chr16	25066937	25068943	25067940	ENSG00000262155.1	+	lincRNA	KNOWN	RP11-266L9.5	1	2	0.560988
chr16	25069570	25070109	25069839	ENSG00000271105.1	+	processed_pseudogene	KNOWN	SCML2P2	1	1	0.505304
chr16	25071490	25072727	25072108	ENSG00000263326.1	-	unprocessed_pseudogene	KNOWN	RP11-266L9.6	1	2	0.288134
chr16	25085592	25111555	25098573	ENSG00000260448.5	-	lincRNA	KNOWN	LCMT1-AS1	4	3	0.496287
chr16	25093387	25095255	25094321	ENSG00000262700.1	+	processed_pseudogene	KNOWN	RP11-266L9.3	1	1	0.525222
chr16	25106569	25107102	25106835	ENSG00000275494.1	-	sense_intronic	KNOWN	RP11-266L9.8	1	1	0.525222
chr16	25111729	25178231	25144980	ENSG00000205629.11	+	protein_coding	KNOWN	LCMT1	13	12	0.690647
chr16	25140577	25149032	25144804	ENSG00000260034.1	-	antisense	KNOWN	LCMT1-AS2	2	3	0.580652
chr16	25185253	25185538	25185395	ENSG00000266166.2	-	misc_RNA	KNOWN	RN7SL557P	1	1	0.513456
chr16	25215731	25228940	25222335	ENSG00000103375.10	+	protein_coding	KNOWN	AQP8	2	6	0.123876
chr16	25236001	25257931	25246966	ENSG00000155592.15	-	protein_coding	KNOWN	ZKSCAN2	3	7	0.574547
chr16	25238318	25239287	25238802	ENSG00000259955.1	+	antisense	KNOWN	CTD-2547G23.2	1	2	0.718948
chr16	25257952	25261066	25259509	ENSG00000274925.1	+	lincRNA	KNOWN	CTD-2547G23.4	1	1	0.319714
chr16	25419814	25424169	25421991	ENSG00000261636.1	-	lincRNA	KNOWN	CTA-249B10.1	1	2	-0.489295
chr16	25454339	25454647	25454493	ENSG00000260690.1	-	processed_pseudogene	KNOWN	CYCSP39	1	1	-0.117462
chr16	25692026	26137688	25914857	ENSG00000182601.6	+	protein_coding	KNOWN	HS3ST4	2	2	-0.017664
chr16	25824710	25826330	25825520	ENSG00000260255.1	-	processed_pseudogene	KNOWN	RP11-185O21.1	1	2	-0.287942
chr16	26025237	26025310	26025273	ENSG00000265005.1	+	miRNA	KNOWN	MIR548W	1	1	-0.223870
chr16	26028912	26029025	26028968	ENSG00000199929.1	+	rRNA	KNOWN	RNA5SP405	1	1	-0.223870
chr16	26032539	26032811	26032675	ENSG00000230330.1	-	processed_pseudogene	KNOWN	HMGN2P3	1	1	-0.003165
chr16	26062750	26063097	26062923	ENSG00000237140.2	-	processed_pseudogene	KNOWN	HSPE1P16	1	1	-0.102737
chr16	26302064	26334428	26318246	ENSG00000231876.7	+	lincRNA	KNOWN	AC009158.1	8	3	-0.086953
chr16	26354796	26358355	26356575	ENSG00000228480.1	-	unprocessed_pseudogene	KNOWN	AC130464.1	1	6	-0.084886
chr16	26547024	26547119	26547071	ENSG00000281090.1	-	miRNA	NOVEL	AC008756.1	1	1	-0.116595
chr16	26584755	26594813	26589784	ENSG00000236481.1	-	lincRNA	KNOWN	AC002331.1	1	2	-0.108384
chr16	26721874	26729126	26725500	ENSG00000260580.1	+	lincRNA	KNOWN	RP11-142A12.1	1	2	-0.266639
chr16	26736229	26736317	26736273	ENSG00000264935.1	+	miRNA	NOVEL	AC009035.1	1	1	-0.062731
chr16	27066707	27069165	27067936	ENSG00000234186.2	+	lincRNA	KNOWN	C16orf82	2	1	0.099297
chr16	27066928	27067858	27067393	ENSG00000261482.1	-	antisense	KNOWN	RP11-673P17.2	1	2	0.099297
chr16	27133483	27135179	27134331	ENSG00000261557.1	-	processed_pseudogene	KNOWN	EEF1A1P38	1	2	0.120561
chr16	27158451	27176587	27167519	ENSG00000261045.2	-	lincRNA	KNOWN	RP11-673P17.4	1	4	0.459943
chr16	27203495	27221768	27212631	ENSG00000155666.11	+	protein_coding	KNOWN	KDM8	14	8	0.696432
chr16	27213308	27214993	27214150	ENSG00000259940.2	-	antisense	KNOWN	CTD-3203P2.1	1	1	0.650579
chr16	27224991	27268794	27246892	ENSG00000169189.16	-	protein_coding	KNOWN	NSMCE1	14	10	0.698367
chr16	27268205	27290492	27279348	ENSG00000245888.6	+	antisense	KNOWN	FLJ21408	4	5	0.538819
chr16	27313387	27314101	27313744	ENSG00000274092.1	-	antisense	KNOWN	CTD-3203P2.3	1	1	0.438914
chr16	27313668	27364778	27339223	ENSG00000077238.13	+	protein_coding	KNOWN	IL4R	19	11	0.623381
chr16	27402162	27452042	27427102	ENSG00000103522.15	+	protein_coding	KNOWN	IL21R	5	10	0.489724
chr16	27447669	27453393	27450531	ENSG00000259954.1	-	antisense	KNOWN	IL21R-AS1	1	3	0.568443
chr16	27459555	27549913	27504734	ENSG00000077235.17	-	protein_coding	KNOWN	GTF3C1	13	37	0.759026
chr16	27550133	27780369	27665251	ENSG00000047578.12	+	protein_coding	KNOWN	KIAA0556	10	28	0.610334
chr16	27643199	27644663	27643931	ENSG00000261736.1	+	sense_intronic	KNOWN	AC002551.1	1	2	0.849290
chr16	27661900	27662018	27661959	ENSG00000221528.1	+	miRNA	NOVEL	AC016597.1	1	1	0.595490
chr16	27678940	27718806	27698873	ENSG00000261329.5	-	antisense	KNOWN	CTD-2049O4.1	4	4	0.568886
chr16	27687182	27687522	27687352	ENSG00000273553.1	+	sense_intronic	KNOWN	CTD-2049O4.2	1	1	0.478050
chr16	27722284	27722392	27722338	ENSG00000201371.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.489956
chr16	27787535	28063509	27925522	ENSG00000169181.12	-	protein_coding	KNOWN	GSG1L	5	7	0.510231
chr16	27863251	27863356	27863303	ENSG00000212382.1	+	snRNA	KNOWN	RNU6-159P	1	1	0.423613
chr16	27998295	27998401	27998348	ENSG00000207266.1	-	snRNA	KNOWN	RNU6-1241P	1	1	0.241628
chr16	28097979	28211920	28154949	ENSG00000169180.11	-	protein_coding	KNOWN	XPO6	23	25	0.517636
chr16	28111173	28111647	28111410	ENSG00000260452.1	-	processed_pseudogene	KNOWN	TPRKBP2	1	1	0.537403
chr16	28179091	28179164	28179127	ENSG00000281854.1	+	miRNA	NOVEL	AC136611.1	1	1	0.516490
chr16	28179098	28179223	28179160	ENSG00000200652.1	+	snoRNA	NOVEL	SNORA25	1	1	0.516490
chr16	28183318	28183430	28183374	ENSG00000200138.1	+	misc_RNA	KNOWN	RNY1P10	1	1	0.516490
chr16	28239693	28240668	28240180	ENSG00000250982.2	-	processed_pseudogene	KNOWN	RP11-159J3.1	1	1	0.782564
chr16	28284885	28292064	28288474	ENSG00000246465.1	-	lincRNA	KNOWN	RP11-57A19.2	1	2	0.844993
chr16	28292519	28323849	28308184	ENSG00000188322.4	+	protein_coding	KNOWN	SBK1	1	4	0.826293
chr16	28341437	28341543	28341490	ENSG00000277191.1	+	unprocessed_pseudogene	KNOWN	RP11-57A19.6	1	1	0.686637
chr16	28342555	28363508	28353031	ENSG00000198156.10	-	protein_coding	KNOWN	NPIPB6	2	7	0.694381
chr16	28364700	28365333	28365016	ENSG00000271623.1	+	processed_pseudogene	KNOWN	RP11-435I10.5	1	1	0.698649
chr16	28379579	28403879	28391729	ENSG00000205609.12	-	protein_coding	KNOWN	EIF3CL	2	21	0.923193
chr16	28390982	28391051	28391016	ENSG00000275429.1	-	miRNA	KNOWN	MIR6862-1	1	1	0.913454
chr16	28413703	28415018	28414360	ENSG00000261089.1	+	processed_pseudogene	KNOWN	RP11-435I10.3	1	2	1.175864
chr16	28451644	28455356	28453500	ENSG00000275654.1	+	unprocessed_pseudogene	KNOWN	RP11-435I10.6	1	2	0.881632
chr16	28454141	28454511	28454326	ENSG00000270118.1	-	lincRNA	KNOWN	RP11-57A19.5	1	1	0.881632
chr16	28456372	28471175	28463773	ENSG00000233232.6	-	protein_coding	KNOWN	NPIPB7	2	7	0.859482
chr16	28466653	28492012	28479332	ENSG00000261832.5	-	protein_coding	KNOWN	RP11-435I10.4	1	14	0.680724
chr16	28477279	28495575	28486427	ENSG00000188603.16	-	protein_coding	KNOWN	CLN3	40	17	0.760670
chr16	28494649	28498970	28496809	ENSG00000184730.10	+	protein_coding	KNOWN	APOBR	2	5	1.120751
chr16	28499362	28512051	28505706	ENSG00000197272.2	-	protein_coding	KNOWN	IL27	2	5	1.122612
chr16	28532708	28539174	28535941	ENSG00000176046.8	-	protein_coding	KNOWN	NUPR1	3	4	1.077871
chr16	28548331	28548658	28548494	ENSG00000271495.1	-	processed_pseudogene	KNOWN	RP11-666O2.1	1	1	1.077871
chr16	28553709	28554140	28553924	ENSG00000275441.1	-	antisense	KNOWN	RP11-666O2.2	1	1	1.082773
chr16	28553915	28591790	28572852	ENSG00000176476.8	+	protein_coding	KNOWN	SGF29	7	10	0.843089
chr16	28591943	28597109	28594526	ENSG00000197165.10	-	protein_coding	KNOWN	SULT1A2	5	8	1.004529
chr16	28599241	28601881	28600561	ENSG00000278665.1	-	unprocessed_pseudogene	KNOWN	RP11-666O2.4	1	4	1.004529
chr16	28602340	28604519	28603429	ENSG00000278725.1	+	unprocessed_pseudogene	KNOWN	RP11-666O2.5	1	3	1.004529
chr16	28605196	28623625	28614410	ENSG00000196502.11	-	protein_coding	KNOWN	SULT1A1	11	11	1.124046
chr16	28637654	28658682	28648168	ENSG00000255524.7	+	protein_coding	KNOWN	NPIPB8	2	7	0.635068
chr16	28659696	28740781	28700238	ENSG00000261419.1	-	unprocessed_pseudogene	KNOWN	RP11-57A19.4	1	3	0.934615
chr16	28688558	28735730	28712144	ENSG00000184110.14	+	protein_coding	KNOWN	EIF3C	14	21	1.018547
chr16	28700294	28701540	28700917	ENSG00000259982.1	-	processed_pseudogene	KNOWN	CDC37P1	1	2	1.031527
chr16	28724252	28724321	28724286	ENSG00000278340.1	+	miRNA	KNOWN	MIR6862-2	1	1	0.950294
chr16	28749959	28750595	28750277	ENSG00000270424.1	-	processed_pseudogene	KNOWN	RP11-1348G14.6	1	1	1.098638
chr16	28751787	28772807	28762297	ENSG00000196993.8	+	protein_coding	KNOWN	NPIPB9	2	8	1.050714
chr16	28773824	28777534	28775679	ENSG00000278528.1	-	unprocessed_pseudogene	KNOWN	RP11-1348G14.7	1	2	0.810079
chr16	28802743	28817828	28810285	ENSG00000251417.2	+	lincRNA	KNOWN	RP11-1348G14.4	1	2	0.965951
chr16	28813980	28814673	28814326	ENSG00000240634.1	-	processed_pseudogene	KNOWN	RP11-1348G14.1	1	1	1.109270
chr16	28820570	28822033	28821301	ENSG00000260796.1	-	antisense	KNOWN	RP11-1348G14.5	1	2	1.109270
chr16	28822431	28823969	28823200	ENSG00000275807.1	-	antisense	KNOWN	RP11-1348G14.8	1	1	1.109270
chr16	28823035	28837237	28830136	ENSG00000168488.18	+	protein_coding	KNOWN	ATXN2L	26	24	1.172201
chr16	28830612	28837200	28833906	ENSG00000260570.1	-	antisense	KNOWN	RP11-24N18.1	1	2	1.232750
chr16	28842411	28846408	28844409	ENSG00000178952.8	-	protein_coding	KNOWN	TUFM	4	10	1.232750
chr16	28843919	28844007	28843963	ENSG00000264455.1	-	miRNA	KNOWN	MIR4721	1	1	1.232750
chr16	28846600	28874212	28860406	ENSG00000178188.14	+	protein_coding	KNOWN	SH2B1	16	11	1.200568
chr16	28862166	28863340	28862753	ENSG00000261766.1	-	antisense	KNOWN	RP11-22P6.2	1	2	1.116158
chr16	28878405	28904509	28891457	ENSG00000196296.13	+	protein_coding	KNOWN	ATP2A1	9	23	1.365005
chr16	28878957	28879920	28879438	ENSG00000260442.5	-	antisense	KNOWN	ATP2A1-AS1	2	2	1.575314
chr16	28881480	28881607	28881543	ENSG00000252461.1	-	snoRNA	NOVEL	SNORA43	1	1	1.575314
chr16	28904421	28936526	28920473	ENSG00000177548.12	-	protein_coding	KNOWN	RABEP2	14	13	1.230218
chr16	28931939	28939346	28935642	ENSG00000177455.11	+	protein_coding	KNOWN	CD19	7	16	1.174454
chr16	28950807	28967097	28958952	ENSG00000176953.10	+	protein_coding	KNOWN	NFATC2IP	7	8	1.059674
chr16	28956687	28966883	28961785	ENSG00000260853.1	-	antisense	KNOWN	RP11-264B17.2	2	2	1.059674
chr16	28958583	28958661	28958622	ENSG00000266868.1	+	miRNA	KNOWN	MIR4517	1	1	1.059674
chr16	28973962	28978824	28976393	ENSG00000260367.2	-	antisense	KNOWN	RP11-264B17.4	1	2	1.087448
chr16	28974221	28984548	28979384	ENSG00000169682.17	+	protein_coding	KNOWN	SPNS1	12	13	1.087448
chr16	28974804	28990783	28982793	ENSG00000261067.6	+	processed_transcript	KNOWN	RP11-264B17.3	2	19	1.086380
chr16	28982014	28982130	28982072	ENSG00000281146.1	+	miRNA	NOVEL	AC109460.1	1	1	1.087448
chr16	28984826	28990783	28987804	ENSG00000213658.10	+	protein_coding	KNOWN	LAT	16	13	1.084583
chr16	28989140	28990778	28989959	ENSG00000261552.1	-	antisense	KNOWN	RP11-264B17.5	1	2	1.077096
chr16	29038655	29052726	29045690	ENSG00000196796.5	+	unprocessed_pseudogene	KNOWN	CTB-134H23.2	1	8	0.596752
chr16	29053732	29108108	29080920	ENSG00000260908.1	-	transcribed_unprocessed_pseudogene	KNOWN	CTB-134H23.3	3	3	0.550157
chr16	29074976	29116718	29095847	ENSG00000103472.9	+	transcribed_unprocessed_pseudogene	KNOWN	RRN3P2	3	16	0.487368
chr16	29116127	29217860	29166993	ENSG00000260517.2	+	lincRNA	KNOWN	RP11-426C22.5	3	3	0.786414
chr16	29204633	29205855	29205244	ENSG00000279106.1	+	TEC	KNOWN	RP11-426C22.1	1	1	0.925982
chr16	29217170	29220031	29218600	ENSG00000259807.1	-	lincRNA	KNOWN	RP11-426C22.4	1	2	0.649849
chr16	29225594	29226348	29225971	ENSG00000273582.1	-	lincRNA	KNOWN	RP11-426C22.7	1	2	0.649849
chr16	29262273	29264479	29263376	ENSG00000260953.1	-	lincRNA	KNOWN	RP11-426C22.6	1	2	1.006092
chr16	29272220	29272772	29272496	ENSG00000277999.1	+	lincRNA	KNOWN	RP11-426C22.8	1	1	0.840992
chr16	29291220	29372110	29331665	ENSG00000198106.8	+	lincRNA	KNOWN	RP11-231C14.7	1	11	0.728392
chr16	29312350	29331277	29321813	ENSG00000260413.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-231C14.6	1	5	0.773021
chr16	29350746	29370272	29360509	ENSG00000271699.5	+	transcribed_unprocessed_pseudogene	KNOWN	SNX29P2	4	6	0.741617
chr16	29380242	29380345	29380293	ENSG00000278078.1	+	unprocessed_pseudogene	KNOWN	RP11-231C14.8	1	1	0.954885
chr16	29381354	29404029	29392691	ENSG00000254206.5	-	protein_coding	KNOWN	NPIPB11	2	8	0.850615
chr16	29422851	29422959	29422905	ENSG00000278509.1	-	miRNA	NOVEL	AC025279.1	1	1	0.762424
chr16	29425800	29447026	29436413	ENSG00000254634.4	-	unprocessed_pseudogene	KNOWN	SMG1P6	1	19	0.642418
chr16	29443056	29454964	29449010	ENSG00000183336.8	-	protein_coding	KNOWN	BOLA2	2	6	0.648084
chr16	29443230	29454651	29448940	ENSG00000261740.6	-	protein_coding	KNOWN	RP11-345J4.5	3	6	0.647270
chr16	29449191	29449625	29449408	ENSG00000260335.1	+	unprocessed_pseudogene	KNOWN	RP11-345J4.6	1	2	0.612824
chr16	29454501	29458219	29456360	ENSG00000181625.17	+	protein_coding	KNOWN	SLX1B	5	6	0.697392
chr16	29455105	29464963	29460034	ENSG00000260280.5	+	processed_transcript	KNOWN	SLX1B-SULT1A4	3	10	0.697392
chr16	29459889	29464976	29462432	ENSG00000213648.10	+	protein_coding	KNOWN	SULT1A4	5	8	0.697392
chr16	29464967	29467833	29466400	ENSG00000258150.5	-	protein_coding	KNOWN	RP11-345J4.3	3	5	0.697392
chr16	29467161	29467578	29467369	ENSG00000279228.1	+	TEC	KNOWN	RP11-345J4.4	1	1	0.697392
chr16	29475064	29475355	29475209	ENSG00000257691.2	+	processed_pseudogene	KNOWN	RP11-345J4.1	1	1	0.976515
chr16	29478879	29482591	29480735	ENSG00000257506.1	+	unprocessed_pseudogene	KNOWN	RP11-231C14.5	1	2	0.976515
chr16	29483642	29505999	29494820	ENSG00000169203.16	-	protein_coding	KNOWN	RP11-231C14.4	9	9	0.795235
chr16	29524592	29524700	29524646	ENSG00000276338.1	-	miRNA	NOVEL	AC133555.1	1	1	0.528763
chr16	29527568	29594966	29561267	ENSG00000205534.6	-	unprocessed_pseudogene	KNOWN	SMG1P2	1	29	0.614249
chr16	29595130	29596137	29595633	ENSG00000279583.1	-	TEC	KNOWN	RP11-368N21.5	1	1	0.786903
chr16	29599179	29599265	29599222	ENSG00000266758.1	-	miRNA	KNOWN	MIR3680-2	1	1	0.786903
chr16	29613104	29613640	29613372	ENSG00000260727.1	-	unprocessed_pseudogene	KNOWN	SLC7A5P1	1	1	1.003361
chr16	29618785	29636328	29627556	ENSG00000260133.1	-	unprocessed_pseudogene	KNOWN	CA5AP1	1	5	0.940914
chr16	29624517	29624825	29624671	ENSG00000260514.1	+	processed_pseudogene	KNOWN	RP11-368N21.1	1	1	1.003361
chr16	29662979	29670876	29666927	ENSG00000197471.11	+	protein_coding	KNOWN	SPN	5	3	0.633100
chr16	29663279	29695144	29679211	ENSG00000277669.1	+	protein_coding	KNOWN	AC009133.22	1	3	0.844061
chr16	29679008	29698699	29688853	ENSG00000103485.17	+	protein_coding	KNOWN	QPRT	4	4	0.986268
chr16	29731051	29731404	29731227	ENSG00000222375.1	-	misc_RNA	KNOWN	RN7SKP127	1	1	0.956875
chr16	29742463	29746006	29744234	ENSG00000185905.3	-	protein_coding	KNOWN	C16orf54	1	2	0.956875
chr16	29745247	29748299	29746773	ENSG00000260719.1	+	antisense	KNOWN	AC009133.17	1	2	0.956875
chr16	29778240	29782973	29780606	ENSG00000174992.7	+	protein_coding	KNOWN	ZG16	1	4	0.832409
chr16	29790719	29805385	29798052	ENSG00000079616.12	+	protein_coding	KNOWN	KIF22	10	14	0.974898
chr16	29804430	29804990	29804710	ENSG00000275857.1	-	antisense	KNOWN	AC009133.21	1	1	0.974898
chr16	29806106	29811164	29808635	ENSG00000103495.13	+	protein_coding	KNOWN	MAZ	16	6	1.068080
chr16	29806496	29807732	29807114	ENSG00000259952.1	-	antisense	KNOWN	AC009133.15	1	2	0.974898
chr16	29808636	29821252	29814944	ENSG00000238045.9	-	antisense	KNOWN	AC009133.12	5	4	1.335752
chr16	29808679	29812227	29810453	ENSG00000280607.1	+	processed_transcript	KNOWN	AC009133.24	1	3	1.228946
chr16	29811382	29815892	29813637	ENSG00000167371.16	+	protein_coding	KNOWN	PRRT2	7	4	1.379460
chr16	29812261	29820092	29816176	ENSG00000280893.1	+	protein_coding	KNOWN	AC009133.23	1	6	1.379460
chr16	29815952	29820117	29818034	ENSG00000280789.1	+	protein_coding	KNOWN	PAGR1	1	3	1.379460
chr16	29817239	29830627	29823933	ENSG00000281348.1	+	protein_coding	KNOWN	CTD-2574D22.6	1	3	1.373350
chr16	29820394	29848039	29834216	ENSG00000013364.18	+	protein_coding	KNOWN	MVP	19	15	1.294462
chr16	29858357	29863736	29861046	ENSG00000103502.13	-	protein_coding	KNOWN	CDIPT	10	7	1.124969
chr16	29862760	29863417	29863088	ENSG00000278713.1	+	antisense	KNOWN	CTD-2574D22.7	1	1	1.124969
chr16	29863593	29868053	29865823	ENSG00000214725.7	+	antisense	KNOWN	CDIPT-AS1	2	6	1.124969
chr16	29871159	29899547	29885353	ENSG00000174938.14	-	protein_coding	KNOWN	SEZ6L2	9	18	1.288339
chr16	29900375	29919864	29910119	ENSG00000174939.10	+	protein_coding	KNOWN	ASPHD1	5	5	0.959745
chr16	29905012	29927035	29916023	ENSG00000174943.9	-	protein_coding	KNOWN	KCTD13	9	7	0.883274
chr16	29913144	29915337	29914240	ENSG00000279789.1	-	TEC	KNOWN	CTD-2574D22.3	1	1	0.818508
chr16	29919634	29921905	29920769	ENSG00000260114.2	-	sense_intronic	KNOWN	CTD-2574D22.4	1	1	0.818508
chr16	29926836	29928933	29927884	ENSG00000247735.2	+	antisense	KNOWN	CTD-2574D22.2	1	2	0.818508
chr16	29940885	29973052	29956968	ENSG00000149932.16	+	protein_coding	KNOWN	TMEM219	9	6	0.972605
chr16	29973641	29992261	29982951	ENSG00000149930.17	+	protein_coding	KNOWN	TAOK2	6	19	1.103869
chr16	29992321	29996436	29994378	ENSG00000149929.15	-	protein_coding	KNOWN	HIRIP3	7	7	1.251319
chr16	29995294	30005793	30000543	ENSG00000169592.14	+	protein_coding	KNOWN	INO80E	14	11	1.251319
chr16	30005509	30023270	30014389	ENSG00000149927.17	-	protein_coding	KNOWN	DOC2A	18	12	1.325596
chr16	30023334	30027736	30025535	ENSG00000167194.7	+	protein_coding	KNOWN	C16orf92	4	4	1.350726
chr16	30024427	30052978	30038702	ENSG00000149926.13	-	protein_coding	KNOWN	FAM57B	7	7	1.197639
chr16	30053090	30070457	30061773	ENSG00000149925.16	+	protein_coding	KNOWN	ALDOA	28	16	1.008185
chr16	30064306	30064825	30064565	ENSG00000274904.1	-	antisense	KNOWN	CTD-2515O10.5	1	1	0.999480
chr16	30075978	30085377	30080677	ENSG00000149923.13	+	protein_coding	KNOWN	PPP4C	14	9	1.329571
chr16	30085793	30091887	30088840	ENSG00000149922.10	-	protein_coding	KNOWN	TBX6	5	9	1.344462
chr16	30092314	30096915	30094614	ENSG00000090238.11	-	protein_coding	KNOWN	YPEL3	12	5	1.377636
chr16	30096430	30104116	30100273	ENSG00000250616.2	+	antisense	KNOWN	RP11-455F5.3	1	2	1.377636
chr16	30104810	30113856	30109333	ENSG00000102886.14	-	protein_coding	KNOWN	GDPD3	5	10	1.253977
chr16	30107675	30110541	30109108	ENSG00000261367.1	+	antisense	KNOWN	RP11-455F5.4	1	2	1.322789
chr16	30110895	30111955	30111425	ENSG00000275371.1	+	antisense	KNOWN	RP11-455F5.6	1	1	1.087613
chr16	30114105	30123506	30118805	ENSG00000102882.11	-	protein_coding	KNOWN	MAPK3	15	9	1.087613
chr16	30182827	30189076	30185951	ENSG00000102879.15	+	protein_coding	KNOWN	CORO1A	17	12	0.990352
chr16	30183505	30184957	30184231	ENSG00000261416.1	-	antisense	KNOWN	RP11-455F5.5	3	3	0.990352
chr16	30192934	30194306	30193620	ENSG00000169627.7	-	protein_coding	KNOWN	BOLA2B	4	3	1.129644
chr16	30193887	30197561	30195724	ENSG00000132207.17	+	protein_coding	KNOWN	SLX1A	6	6	1.129644
chr16	30193892	30204310	30199101	ENSG00000213599.10	+	processed_transcript	KNOWN	SLX1A-SULT1A3	6	11	1.129644
chr16	30199228	30204310	30201769	ENSG00000261052.5	+	protein_coding	KNOWN	SULT1A3	10	8	1.129644
chr16	30204316	30209071	30206693	ENSG00000258130.7	-	protein_coding	KNOWN	RP11-347C12.3	5	5	1.129644
chr16	30206510	30206927	30206718	ENSG00000278887.1	+	TEC	KNOWN	RP11-347C12.4	1	1	1.129644
chr16	30214409	30214699	30214554	ENSG00000261444.1	+	unprocessed_pseudogene	KNOWN	RP11-347C12.9	1	2	1.046395
chr16	30218220	30221930	30220075	ENSG00000261203.1	+	unprocessed_pseudogene	KNOWN	RP11-347C12.8	1	2	1.046395
chr16	30222937	30254510	30238723	ENSG00000198064.13	-	protein_coding	KNOWN	RP11-347C12.1	7	8	0.856665
chr16	30264576	30264684	30264630	ENSG00000278557.1	-	miRNA	NOVEL	AC106782.1	1	1	0.412961
chr16	30267553	30335374	30301463	ENSG00000183604.14	-	transcribed_unprocessed_pseudogene	KNOWN	SMG1P5	3	29	0.581022
chr16	30336400	30343336	30339868	ENSG00000273724.1	+	unprocessed_pseudogene	KNOWN	RP11-347C12.12	1	2	0.543929
chr16	30350766	30355361	30353063	ENSG00000169217.8	-	protein_coding	KNOWN	CD2BP2	3	7	1.137928
chr16	30355441	30357104	30356272	ENSG00000260219.2	+	lincRNA	KNOWN	RP11-347C12.10	1	2	1.137928
chr16	30357102	30370264	30363683	ENSG00000169221.13	-	protein_coding	KNOWN	TBC1D10B	7	9	1.140349
chr16	30359825	30360336	30360080	ENSG00000274653.1	+	antisense	KNOWN	RP11-347C12.11	1	1	1.137928
chr16	30370934	30377991	30374462	ENSG00000180209.11	+	protein_coding	KNOWN	MYLPF	5	8	1.258184
chr16	30378106	30400108	30389107	ENSG00000180035.10	+	protein_coding	KNOWN	ZNF48	7	3	1.123775
chr16	30378133	30395991	30387062	ENSG00000180096.11	-	protein_coding	KNOWN	SEPT1	10	12	1.160027
chr16	30379763	30380110	30379936	ENSG00000280137.1	-	TEC	KNOWN	RP11-297C4.6	1	1	1.258184
chr16	30407297	30431108	30419202	ENSG00000179965.11	+	protein_coding	KNOWN	ZNF771	4	3	1.132706
chr16	30419625	30419759	30419692	ENSG00000199787.1	-	snoRNA	NOVEL	SNORA42	1	1	1.160010
chr16	30423619	30430075	30426847	ENSG00000179958.8	-	protein_coding	KNOWN	DCTPP1	5	3	1.158683
chr16	30444381	30446181	30445281	ENSG00000179918.17	-	protein_coding	KNOWN	SEPHS2	1	1	1.047323
chr16	30453997	30454097	30454047	ENSG00000202476.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.970976
chr16	30471587	30471703	30471645	ENSG00000222701.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.002106
chr16	30472658	30523185	30497921	ENSG00000005844.17	+	protein_coding	KNOWN	ITGAL	19	31	0.850531
chr16	30477180	30489353	30483266	ENSG00000261346.1	-	antisense	KNOWN	RP11-297C4.2	1	3	1.002106
chr16	30480588	30481346	30480967	ENSG00000260487.1	-	antisense	KNOWN	RP11-297C4.3	1	2	1.002106
chr16	30483135	30483195	30483165	ENSG00000251706.1	-	snRNA	KNOWN	RNU7-61P	1	1	1.002106
chr16	30498766	30499554	30499160	ENSG00000261332.1	-	antisense	KNOWN	RP11-297C4.1	1	2	0.718060
chr16	30503919	30504001	30503960	ENSG00000266305.1	+	miRNA	KNOWN	MIR4518	1	1	0.718060
chr16	30524001	30526821	30525411	ENSG00000169957.9	-	protein_coding	KNOWN	ZNF768	2	2	0.852120
chr16	30525923	30534852	30530387	ENSG00000261459.1	-	protein_coding	KNOWN	AC002310.11	1	4	1.018857
chr16	30526918	30528294	30527606	ENSG00000278922.1	+	TEC	KNOWN	AC002310.14	1	1	0.852120
chr16	30530367	30535347	30532857	ENSG00000169955.7	-	protein_coding	KNOWN	ZNF747	3	3	1.158898
chr16	30534227	30558279	30546253	ENSG00000260869.1	-	protein_coding	KNOWN	AC002310.13	1	2	1.170708
chr16	30534752	30537144	30535948	ENSG00000235560.3	+	antisense	KNOWN	AC002310.12	2	2	1.158898
chr16	30537202	30538231	30537716	ENSG00000260494.1	-	unprocessed_pseudogene	KNOWN	AC002310.10	1	2	1.158898
chr16	30553764	30558498	30556131	ENSG00000169951.9	-	protein_coding	KNOWN	ZNF764	3	3	1.193204
chr16	30569346	30572734	30571040	ENSG00000229809.8	-	protein_coding	KNOWN	ZNF688	7	3	1.100530
chr16	30572250	30583860	30578055	ENSG00000239791.1	+	antisense	KNOWN	AC002310.7	2	3	1.078403
chr16	30573740	30585771	30579755	ENSG00000197162.9	-	protein_coding	KNOWN	ZNF785	4	4	1.078403
chr16	30585907	30608593	30597250	ENSG00000260167.1	+	antisense	KNOWN	RP11-146F11.5	1	2	0.938539
chr16	30587662	30587920	30587791	ENSG00000261588.1	-	processed_pseudogene	KNOWN	AC002310.17	1	1	1.078403
chr16	30602558	30624012	30613285	ENSG00000156853.11	-	protein_coding	KNOWN	ZNF689	7	5	0.903847
chr16	30615256	30615679	30615467	ENSG00000260678.1	-	transcribed_processed_pseudogene	KNOWN	RP11-146F11.4	1	1	0.901769
chr16	30624285	30624714	30624499	ENSG00000261680.1	-	processed_pseudogene	KNOWN	RP11-146F11.3	1	1	0.901769
chr16	30626976	30627178	30627077	ENSG00000260113.3	+	processed_pseudogene	KNOWN	RP11-146F11.2	1	1	0.901769
chr16	30650717	30656440	30653578	ENSG00000156858.11	+	protein_coding	KNOWN	PRR14	13	12	1.131045
chr16	30658431	30670814	30664622	ENSG00000156860.15	+	protein_coding	KNOWN	FBRS	9	18	1.120623
chr16	30670160	30670297	30670228	ENSG00000280843.1	+	miRNA	NOVEL	AC093249.1	1	1	0.972693
chr16	30675300	30675402	30675351	ENSG00000252074.1	-	snRNA	KNOWN	RNU6-416P	1	1	0.972693
chr16	30697707	30699058	30698382	ENSG00000261840.2	-	antisense	KNOWN	RP11-146F11.1	2	2	1.359472
chr16	30698209	30741409	30719809	ENSG00000080603.16	+	protein_coding	KNOWN	SRCAP	5	34	1.231769
chr16	30701337	30701435	30701386	ENSG00000222287.1	-	snRNA	KNOWN	RNU6-1043P	1	1	1.359472
chr16	30704067	30745169	30724618	ENSG00000282034.1	+	protein_coding	KNOWN	RP11-2C24.9	1	31	1.203094
chr16	30710537	30710665	30710601	ENSG00000206755.1	+	snoRNA	KNOWN	SNORA30	1	1	1.221810
chr16	30740381	30744281	30742331	ENSG00000281991.1	+	protein_coding	KNOWN	TMEM265	1	3	1.117271
chr16	30740667	30751381	30746024	ENSG00000260899.1	+	processed_transcript	KNOWN	RP11-2C24.4	1	5	1.117949
chr16	30748270	30761176	30754723	ENSG00000156873.15	+	protein_coding	KNOWN	PHKG2	11	11	1.121822
chr16	30757423	30762710	30760066	ENSG00000196118.11	-	protein_coding	KNOWN	CCDC189	12	9	1.122526
chr16	30761745	30776307	30769026	ENSG00000103549.21	+	protein_coding	KNOWN	RNF40	12	20	1.245252
chr16	30773532	30776033	30774782	ENSG00000280211.1	-	TEC	KNOWN	RP11-2C24.3	1	1	1.405838
chr16	30778449	30787202	30782825	ENSG00000102870.5	-	protein_coding	KNOWN	ZNF629	1	3	1.405838
chr16	30816030	30816302	30816166	ENSG00000274848.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.155686
chr16	30821068	30822110	30821589	ENSG00000260082.1	-	processed_pseudogene	KNOWN	RP11-2C24.5	1	2	1.155686
chr16	30821338	30821884	30821611	ENSG00000274678.1	+	lincRNA	KNOWN	RP11-2C24.7	1	1	1.155686
chr16	30833626	30894960	30864293	ENSG00000099385.11	-	protein_coding	KNOWN	BCL7C	5	6	1.161273
chr16	30875222	30895220	30885221	ENSG00000260083.1	+	antisense	KNOWN	MIR762HG	3	3	1.306200
chr16	30875266	30875323	30875294	ENSG00000265991.1	-	miRNA	KNOWN	MIR4519	1	1	1.333000
chr16	30875766	30895216	30885491	ENSG00000262721.1	-	sense_overlapping	KNOWN	AC106782.20	1	2	1.305466
chr16	30893903	30893985	30893944	ENSG00000211591.1	+	miRNA	KNOWN	MIR762	1	1	1.230347
chr16	30896607	30903560	30900083	ENSG00000150281.6	+	protein_coding	KNOWN	CTF1	2	3	1.230347
chr16	30904348	30910208	30907278	ENSG00000230447.2	-	unitary_pseudogene	KNOWN	CTF2P	1	3	1.227330
chr16	30919319	30923269	30921294	ENSG00000260852.1	-	antisense	KNOWN	FBXL19-AS1	1	1	1.145763
chr16	30923055	30948783	30935919	ENSG00000099364.16	+	protein_coding	KNOWN	FBXL19	9	11	1.481041
chr16	30948386	30956511	30952448	ENSG00000261487.1	+	processed_transcript	KNOWN	AC135048.13	2	3	1.219673
chr16	30949066	30956461	30952763	ENSG00000175938.6	+	protein_coding	KNOWN	ORAI3	4	3	1.184887
chr16	30956872	30957199	30957035	ENSG00000275263.1	-	lincRNA	KNOWN	RP11-1072A3.4	1	1	1.124232
chr16	30957294	30985116	30971205	ENSG00000099381.16	+	protein_coding	KNOWN	SETD1A	2	19	1.209254
chr16	30984630	30988270	30986450	ENSG00000279196.1	-	TEC	KNOWN	RP11-1072A3.3	1	1	1.280711
chr16	30985207	30989152	30987179	ENSG00000099377.13	+	protein_coding	KNOWN	HSD3B7	4	7	1.280711
chr16	30989256	31010628	30999942	ENSG00000099365.9	-	protein_coding	KNOWN	STX1B	5	10	1.447519
chr16	31032889	31042975	31037932	ENSG00000103496.14	+	protein_coding	KNOWN	STX4	17	12	1.212286
chr16	31043150	31049868	31046509	ENSG00000260911.2	+	lincRNA	KNOWN	RP11-196G11.2	1	2	1.212286
chr16	31056460	31062803	31059631	ENSG00000232748.3	+	lincRNA	KNOWN	RP11-196G11.6	2	2	1.124206
chr16	31060843	31074320	31067581	ENSG00000167394.12	-	protein_coding	KNOWN	ZNF668	10	4	1.287922
chr16	31065495	31069246	31067370	ENSG00000261124.1	+	antisense	KNOWN	AC135050.5	1	2	1.124206
chr16	31074422	31084196	31079309	ENSG00000167395.10	+	protein_coding	KNOWN	ZNF646	4	3	1.634829
chr16	31083425	31089628	31086526	ENSG00000151006.7	-	protein_coding	KNOWN	PRSS53	3	11	1.634829
chr16	31083439	31094956	31089197	ENSG00000255439.6	-	protein_coding	KNOWN	RP11-196G11.1	3	13	1.535729
chr16	31090842	31095980	31093411	ENSG00000167397.14	-	protein_coding	KNOWN	VKORC1	8	4	1.404582
chr16	31093727	31095944	31094835	ENSG00000280160.1	+	TEC	KNOWN	RP11-196G11.3	1	1	1.404582
chr16	31106107	31112791	31109449	ENSG00000103507.13	+	protein_coding	KNOWN	BCKDK	10	13	1.284999
chr16	31109211	31109318	31109264	ENSG00000252809.3	+	miRNA	NOVEL	AC135050.1	1	1	1.404582
chr16	31115754	31131393	31123573	ENSG00000103510.19	+	protein_coding	KNOWN	KAT8	7	12	1.136220
chr16	31118078	31118747	31118412	ENSG00000262766.1	+	sense_intronic	KNOWN	RP11-196G11.4	1	2	1.118303
chr16	31122235	31124064	31123149	ENSG00000278133.1	+	sense_intronic	KNOWN	RP11-196G11.5	2	2	1.118303
chr16	31131433	31135762	31133597	ENSG00000052344.15	-	protein_coding	KNOWN	PRSS8	6	6	1.319312
chr16	31131433	31131877	31131655	ENSG00000261385.1	+	antisense	KNOWN	RP11-388M20.2	1	2	1.319312
chr16	31138925	31150094	31144509	ENSG00000178226.10	-	protein_coding	KNOWN	PRSS36	9	15	1.316497
chr16	31165648	31165927	31165787	ENSG00000263343.1	+	processed_pseudogene	KNOWN	RP11-388M20.7	1	1	0.988415
chr16	31174573	31174822	31174697	ENSG00000262366.1	+	processed_pseudogene	KNOWN	NDUFA3P6	1	1	0.978036
chr16	31180110	31194871	31187490	ENSG00000089280.18	+	protein_coding	KNOWN	FUS	13	15	0.991370
chr16	31182511	31183285	31182898	ENSG00000260304.1	-	antisense	KNOWN	RP11-388M20.6	1	2	0.978036
chr16	31196131	31196963	31196547	ENSG00000260060.1	+	antisense	KNOWN	RP11-388M20.1	1	1	1.018435
chr16	31201485	31203450	31202467	ENSG00000103490.13	-	protein_coding	KNOWN	PYCARD	4	3	1.018435
chr16	31201885	31203452	31202668	ENSG00000261359.2	+	antisense	KNOWN	PYCARD-AS1	1	2	1.018435
chr16	31214021	31231537	31222779	ENSG00000177238.13	+	protein_coding	KNOWN	TRIM72	2	7	0.806259
chr16	31215962	31217359	31216660	ENSG00000169900.7	-	protein_coding	KNOWN	PYDC1	2	2	0.828957
chr16	31259990	31332892	31296441	ENSG00000169896.16	+	protein_coding	KNOWN	ITGAM	8	30	0.287953
chr16	31355134	31382997	31369065	ENSG00000140678.16	+	protein_coding	KNOWN	ITGAX	7	31	0.854364
chr16	31361278	31361695	31361486	ENSG00000261245.2	-	unprocessed_pseudogene	KNOWN	RP11-120K18.3	1	2	0.646581
chr16	31393312	31426505	31409908	ENSG00000156886.11	+	protein_coding	KNOWN	ITGAD	3	30	0.770059
chr16	31402565	31404699	31403632	ENSG00000260757.1	+	sense_overlapping	KNOWN	RP11-120K18.2	1	2	0.744797
chr16	31427731	31428428	31428079	ENSG00000156885.5	-	protein_coding	KNOWN	COX6A2	2	3	0.795599
chr16	31428180	31428646	31428413	ENSG00000277543.1	+	antisense	KNOWN	RP11-452L6.8	1	1	0.795599
chr16	31432593	31443160	31437876	ENSG00000176723.9	-	protein_coding	KNOWN	ZNF843	3	3	0.878588
chr16	31449535	31453493	31451514	ENSG00000261474.1	-	lincRNA	KNOWN	RP11-452L6.1	1	2	1.124773
chr16	31456711	31459736	31458223	ENSG00000260267.1	-	antisense	KNOWN	RP11-452L6.5	1	1	1.157466
chr16	31458080	31467166	31462623	ENSG00000140691.16	+	protein_coding	KNOWN	ARMC5	8	8	1.157466
chr16	31470204	31472108	31471156	ENSG00000280132.1	-	TEC	KNOWN	RP11-452L6.6	1	1	1.415881
chr16	31471585	31477960	31474772	ENSG00000140682.18	+	protein_coding	KNOWN	TGFB1I1	17	11	1.415881
chr16	31483002	31490860	31486931	ENSG00000140675.12	+	protein_coding	KNOWN	SLC5A2	9	14	1.410653
chr16	31487370	31488492	31487931	ENSG00000260740.2	-	antisense	KNOWN	AC026471.6	1	2	1.415881
chr16	31489471	31509309	31499390	ENSG00000140688.16	-	protein_coding	KNOWN	C16orf58	11	14	1.369440
chr16	31508471	31509256	31508863	ENSG00000260625.2	+	antisense	KNOWN	RP11-452L6.7	1	2	1.368170
chr16	31527864	31528803	31528333	ENSG00000169877.9	+	protein_coding	KNOWN	AHSP	3	3	0.809262
chr16	31546698	31547237	31546967	ENSG00000261648.1	-	lincRNA	KNOWN	CTD-2014E2.2	1	1	0.457388
chr16	31546805	31547737	31547271	ENSG00000213547.3	+	unitary_pseudogene	KNOWN	VN1R64P	1	1	0.457388
chr16	31549143	31553567	31551355	ENSG00000261475.2	-	lincRNA	KNOWN	CTD-2014E2.6	1	2	0.227514
chr16	31554105	31554912	31554508	ENSG00000260883.1	+	unitary_pseudogene	KNOWN	VN1R65P	1	1	0.172365
chr16	31563082	31567716	31565399	ENSG00000261741.5	-	transcribed_unprocessed_pseudogene	KNOWN	FRG2KP	2	4	0.172365
chr16	31566360	31567000	31566680	ENSG00000278885.1	-	TEC	KNOWN	CTD-2014E2.7	1	1	0.172365
chr16	31568386	31569475	31568930	ENSG00000261614.1	-	processed_pseudogene	KNOWN	CSDAP1	1	1	0.172365
chr16	31601593	31603531	31602562	ENSG00000260010.1	-	processed_pseudogene	KNOWN	ZNF720P1	1	1	0.030916
chr16	31648307	31649222	31648764	ENSG00000237185.1	+	unprocessed_pseudogene	KNOWN	VN1R66P	1	1	-0.004761
chr16	31680847	31682101	31681474	ENSG00000260631.1	+	processed_pseudogene	KNOWN	RBM22P12	1	1	-0.004471
chr16	31697397	31697607	31697502	ENSG00000260472.1	-	processed_pseudogene	KNOWN	CTD-2358C21.2	1	1	0.449544
chr16	31699676	31700465	31700070	ENSG00000260568.1	-	lincRNA	KNOWN	CTD-2358C21.3	1	3	0.449544
chr16	31700590	31711986	31706288	ENSG00000131797.12	+	transcribed_unprocessed_pseudogene	KNOWN	CLUHP3	7	10	0.508142
chr16	31704728	31705260	31704994	ENSG00000276867.1	+	lincRNA	KNOWN	CTD-2358C21.5	1	1	0.449544
chr16	31709113	31711984	31710548	ENSG00000261731.2	-	antisense	KNOWN	CTD-2358C21.4	1	2	0.681907
chr16	31713229	31794869	31754049	ENSG00000197302.10	+	protein_coding	KNOWN	ZNF720	13	6	0.283324
chr16	31788202	31790993	31789597	ENSG00000259810.2	+	sense_intronic	KNOWN	AC002519.8	1	1	0.252842
chr16	31801585	31802497	31802041	ENSG00000260722.1	-	unitary_pseudogene	KNOWN	VN1R67P	1	1	0.277103
chr16	31802947	31807973	31805460	ENSG00000261457.3	+	transcribed_processed_pseudogene	KNOWN	AC002519.6	3	2	0.277103
chr16	31807926	31808844	31808385	ENSG00000180663.5	-	unitary_pseudogene	KNOWN	VN1R3	1	1	0.277103
chr16	31863633	31864876	31864254	ENSG00000261284.2	+	processed_pseudogene	KNOWN	RBM22P13	1	1	0.340339
chr16	31870887	31871124	31871005	ENSG00000259874.1	-	processed_pseudogene	KNOWN	RP11-170L3.2	1	1	0.637960
chr16	31873758	31917357	31895557	ENSG00000185947.14	+	protein_coding	KNOWN	ZNF267	6	6	0.439108
chr16	31894542	31894983	31894762	ENSG00000259950.1	-	processed_pseudogene	KNOWN	RP11-170L3.4	1	1	0.419566
chr16	31952160	31952473	31952316	ENSG00000261289.2	+	processed_pseudogene	KNOWN	RP11-170L3.5	1	1	0.175650
chr16	31962063	31962381	31962222	ENSG00000197476.3	+	processed_pseudogene	KNOWN	RP11-170L3.7	1	1	0.175650
chr16	31963803	31964079	31963941	ENSG00000260218.1	+	processed_pseudogene	KNOWN	RP11-170L3.6	1	1	0.175650
chr16	31975803	32003728	31989765	ENSG00000260628.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-1166P10.1	4	10	0.476849
chr16	32008438	32084785	32046611	ENSG00000261727.2	-	transcribed_processed_pseudogene	KNOWN	RP11-1166P10.6	2	3	0.067160
chr16	32034853	32035326	32035089	ENSG00000261704.2	+	IG_V_pseudogene	KNOWN	IGHV1OR16-1	1	2	0.186801
chr16	32051825	32052280	32052052	ENSG00000223931.2	+	unprocessed_pseudogene	KNOWN	RP11-1166P10.8	1	2	-0.069342
chr16	32059084	32059372	32059228	ENSG00000260048.2	+	IG_V_pseudogene	KNOWN	IGHV1OR16-3	1	2	-0.069342
chr16	32066065	32066358	32066211	ENSG00000270472.2	+	IG_V_gene	KNOWN	IGHV3OR16-9	2	1	-0.069342
chr16	32103245	32188107	32145676	ENSG00000230267.7	-	transcribed_unprocessed_pseudogene	KNOWN	HERC2P4	7	24	-0.038709
chr16	32116700	32116997	32116848	ENSG00000260584.1	+	processed_pseudogene	KNOWN	RP11-1166P10.7	1	1	0.120115
chr16	32185624	32186311	32185967	ENSG00000279997.1	+	TEC	KNOWN	RP11-56L13.3	1	1	0.125032
chr16	32188333	32193530	32190931	ENSG00000260847.1	+	lincRNA	KNOWN	RP11-17M15.1	1	2	0.022522
chr16	32189262	32189481	32189371	ENSG00000260649.1	+	transcribed_processed_pseudogene	KNOWN	RP11-56L13.4	1	1	0.125032
chr16	32199902	32202822	32201362	ENSG00000260540.2	+	unprocessed_pseudogene	KNOWN	ABHD17AP8	1	3	-0.025845
chr16	32213380	32213503	32213441	ENSG00000260344.2	-	processed_pseudogene	KNOWN	RP11-56L13.6	1	1	0.043082
chr16	32250620	32254422	32252521	ENSG00000260575.1	-	antisense	KNOWN	RP11-56L13.7	1	2	0.239890
chr16	32252719	32255922	32254320	ENSG00000205456.11	+	protein_coding	KNOWN	TP53TG3D	7	4	0.239890
chr16	32262827	32265514	32264170	ENSG00000260402.1	-	lincRNA	KNOWN	RP11-56L13.1	2	2	0.239890
chr16	32278866	32279115	32278990	ENSG00000259822.2	+	processed_pseudogene	KNOWN	RP11-1292F20.1	1	1	0.029708
chr16	32289547	32310555	32300051	ENSG00000261127.2	-	transcribed_processed_pseudogene	KNOWN	RP11-17M15.2	2	4	0.324631
chr16	32356981	32363695	32360338	ENSG00000260516.2	-	unprocessed_pseudogene	KNOWN	RP11-17M15.4	1	3	0.091992
chr16	32379071	32380049	32379560	ENSG00000260327.2	-	processed_pseudogene	KNOWN	ACTR3BP3	1	1	-0.095094
chr16	32388135	32436200	32412167	ENSG00000260866.1	+	unprocessed_pseudogene	KNOWN	RP11-626K17.5	1	9	-0.194491
chr16	32439069	32441159	32440114	ENSG00000260307.2	-	processed_pseudogene	KNOWN	PABPC1P13	1	2	-0.384621
chr16	32454612	32458758	32456685	ENSG00000261541.1	-	lincRNA	KNOWN	RP11-626K17.3	1	1	-0.261645
chr16	32460266	32460362	32460314	ENSG00000260662.2	-	processed_pseudogene	KNOWN	RP11-626K17.2	1	1	-0.261645
chr16	32475051	32478250	32476650	ENSG00000261233.2	-	unprocessed_pseudogene	KNOWN	ABCD1P3	1	4	0.157580
chr16	32600299	32615639	32607969	ENSG00000259966.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-652G5.1	3	7	0.090601
chr16	32618733	32618852	32618792	ENSG00000262187.1	+	unprocessed_pseudogene	KNOWN	RP11-652G5.2	1	1	0.069484
chr16	32635673	32636045	32635859	ENSG00000261111.1	-	processed_pseudogene	KNOWN	RP11-96K14.1	1	1	-0.193716
chr16	32649193	32663956	32656574	ENSG00000261569.5	+	lincRNA	KNOWN	RP11-586K12.11	2	3	-0.083209
chr16	32650195	32650910	32650552	ENSG00000261263.2	-	transcribed_processed_pseudogene	KNOWN	RP11-586K12.13	2	2	-0.076827
chr16	32663925	32666533	32665229	ENSG00000260311.1	+	lincRNA	KNOWN	RP11-586K12.10	2	2	-0.076827
chr16	32673528	32676732	32675130	ENSG00000183632.14	-	protein_coding	KNOWN	TP53TG3	8	4	0.453590
chr16	32675037	32678831	32676934	ENSG00000260974.1	+	antisense	KNOWN	RP11-586K12.8	1	2	0.453590
chr16	32715931	32716056	32715993	ENSG00000261391.1	+	processed_pseudogene	KNOWN	RP11-586K12.7	1	1	-0.186309
chr16	32726615	32729537	32728076	ENSG00000260864.1	-	unprocessed_pseudogene	KNOWN	ABHD17AP7	1	3	-0.186309
chr16	32735909	32741094	32738501	ENSG00000260845.1	-	lincRNA	KNOWN	RP11-586K12.4	1	2	-0.080993
chr16	32739627	32740166	32739896	ENSG00000261108.2	-	processed_pseudogene	KNOWN	RP11-586K12.5	1	2	-0.080993
chr16	32741314	32776196	32758755	ENSG00000260644.6	+	transcribed_unprocessed_pseudogene	KNOWN	HERC2P5	4	24	0.030020
chr16	32781883	32784138	32783010	ENSG00000278950.1	+	TEC	KNOWN	RP11-67H24.3	1	1	0.099448
chr16	32786394	32787379	32786886	ENSG00000279780.1	+	TEC	KNOWN	RP11-586K12.2	1	1	0.099448
chr16	32787962	32788944	32788453	ENSG00000279795.1	+	TEC	KNOWN	RP11-586K12.1	1	1	0.099448
chr16	32809556	32824645	32817100	ENSG00000260158.1	+	lincRNA	KNOWN	RP11-67H24.2	1	4	-0.222509
chr16	32811029	32811251	32811140	ENSG00000261719.1	-	processed_pseudogene	KNOWN	RP11-67H24.1	1	1	-0.210856
chr16	32845964	32846180	32846072	ENSG00000259934.1	-	processed_pseudogene	KNOWN	RP11-989E6.1	1	1	-0.195345
chr16	32847713	32848156	32847934	ENSG00000259303.5	+	IG_V_gene	KNOWN	IGHV2OR16-5	1	2	-0.195345
chr16	32869985	32873128	32871556	ENSG00000260047.2	+	unprocessed_pseudogene	KNOWN	BCAP31P2	1	4	0.599540
chr16	32877469	32885501	32881485	ENSG00000214617.9	-	transcribed_unprocessed_pseudogene	KNOWN	SLC6A10P	3	13	0.601320
chr16	32885194	32888874	32887034	ENSG00000214614.2	+	lincRNA	KNOWN	RP11-989E6.3	3	5	0.601320
chr16	32903442	32903894	32903668	ENSG00000261834.2	+	IG_V_pseudogene	KNOWN	IGHV3OR16-15	1	2	0.403306
chr16	32915074	32915536	32915305	ENSG00000270864.1	+	IG_V_pseudogene	KNOWN	IGHV3OR16-6	1	2	-0.023485
chr16	32916974	32946392	32931683	ENSG00000277304.1	+	unprocessed_pseudogene	KNOWN	RP11-989E6.13	1	15	0.351633
chr16	32931768	32932569	32932168	ENSG00000260610.1	-	processed_pseudogene	KNOWN	RP11-989E6.11	1	1	0.649681
chr16	32951993	33028037	32990015	ENSG00000261259.1	-	transcribed_processed_pseudogene	KNOWN	RP11-19N8.2	2	3	0.159619
chr16	32978461	32978891	32978676	ENSG00000259852.2	+	IG_V_pseudogene	KNOWN	IGHV1OR16-2	1	2	0.195303
chr16	32995048	32995505	32995276	ENSG00000233732.5	+	IG_V_gene	KNOWN	IGHV3OR16-10	1	2	0.014409
chr16	32995537	32996770	32996153	ENSG00000260921.1	+	lincRNA	KNOWN	RP11-989E6.8	1	3	0.014409
chr16	33002333	33002621	33002477	ENSG00000259997.2	+	IG_V_pseudogene	KNOWN	IGHV1OR16-4	1	2	0.014409
chr16	33009175	33009620	33009397	ENSG00000271130.1	+	IG_V_gene	KNOWN	IGHV3OR16-8	1	2	0.014409
chr16	33043609	33095431	33069520	ENSG00000260141.1	-	lincRNA	KNOWN	RP11-19N8.4	2	5	-0.277017
chr16	33059936	33060098	33060017	ENSG00000260900.1	+	processed_pseudogene	KNOWN	RP11-19N8.3	1	1	-0.328263
chr16	33094204	33129090	33111647	ENSG00000261599.5	-	transcribed_unprocessed_pseudogene	KNOWN	HERC2P8	4	18	-0.094305
chr16	33129316	33134499	33131907	ENSG00000261682.1	+	lincRNA	KNOWN	RP11-19N8.7	1	2	0.037237
chr16	33130235	33130442	33130338	ENSG00000259800.1	+	processed_pseudogene	KNOWN	RP11-19N8.6	1	1	0.040766
chr16	33140850	33143797	33142323	ENSG00000261536.2	+	unprocessed_pseudogene	KNOWN	ABHD17AP9	1	3	0.040766
chr16	33154352	33154475	33154413	ENSG00000260414.1	-	processed_pseudogene	KNOWN	RP11-1437A8.2	1	1	0.083059
chr16	33191561	33195354	33193457	ENSG00000260419.1	-	antisense	KNOWN	RP11-1437A8.3	1	2	0.003058
chr16	33193659	33306938	33250298	ENSG00000205457.10	+	protein_coding	KNOWN	TP53TG3C	8	4	-0.009849
chr16	33203773	33206462	33205117	ENSG00000260827.1	-	lincRNA	KNOWN	RP11-1437A8.4	2	2	0.003058
chr16	33206431	33330342	33268386	ENSG00000261507.1	-	lincRNA	KNOWN	RP11-1437A8.6	1	3	0.012470
chr16	33303739	33306935	33305337	ENSG00000275034.2	+	protein_coding	KNOWN	TP53TG3E	2	2	0.083628
chr16	33345182	33345396	33345289	ENSG00000282973.1	+	processed_pseudogene	KNOWN	RP11-1277H1.3	1	1	0.728968
chr16	33360274	33363478	33361876	ENSG00000261509.6	+	protein_coding	KNOWN	TP53TG3B	5	4	0.147948
chr16	33370473	33372915	33371694	ENSG00000261009.1	-	lincRNA	KNOWN	RP11-1437A8.5	2	2	0.185651
chr16	33386105	33386349	33386227	ENSG00000283110.1	+	processed_pseudogene	KNOWN	RP11-1437A8.7	1	1	0.185651
chr16	33459045	33462249	33460647	ENSG00000278848.2	+	protein_coding	KNOWN	TP53TG3F	2	2	0.141235
chr16	33484887	33485131	33485009	ENSG00000282927.1	+	processed_pseudogene	KNOWN	RP11-23E10.7	1	1	0.496834
chr16	33495943	33496093	33496018	ENSG00000262090.1	-	processed_pseudogene	KNOWN	RP11-23E10.5	1	1	0.488728
chr16	33533816	33534976	33534396	ENSG00000260626.1	-	lincRNA	KNOWN	RP11-23E10.3	1	2	0.029347
chr16	33541842	33545812	33543827	ENSG00000261200.1	-	lincRNA	KNOWN	RP11-989E6.10	1	1	0.029347
chr16	33548297	33554408	33551352	ENSG00000261466.2	-	lincRNA	KNOWN	RP11-23E10.2	1	3	0.256026
chr16	33562649	33570935	33566792	ENSG00000261405.2	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-23E10.4	2	5	0.313071
chr16	33577502	33622547	33600024	ENSG00000259882.2	+	unprocessed_pseudogene	KNOWN	RP11-293B20.2	1	11	0.195614
chr16	33687025	33698504	33692764	ENSG00000260518.1	-	transcribed_unprocessed_pseudogene	KNOWN	BMS1P8	3	7	0.173333
chr16	33723356	33763773	33743564	ENSG00000282924.1	-	unprocessed_pseudogene	KNOWN	RP11-104C4.6	1	19	-0.318635
chr16	33769421	33769679	33769550	ENSG00000261580.1	+	processed_pseudogene	KNOWN	ENPP7P13	1	1	-0.268640
chr16	33771035	33771248	33771141	ENSG00000260308.1	+	processed_pseudogene	KNOWN	RP11-104C4.4	1	1	-0.044121
chr16	33802764	33803217	33802990	ENSG00000270467.1	+	IG_V_gene	KNOWN	IGHV3OR16-12	1	2	-0.311504
chr16	33808778	33810767	33809772	ENSG00000261153.2	+	processed_pseudogene	KNOWN	RP11-104C4.2	1	1	-0.195459
chr16	33827214	33827661	33827437	ENSG00000271178.1	+	IG_V_gene	KNOWN	IGHV3OR16-13	1	2	-0.010965
chr16	33844784	33845229	33845006	ENSG00000259680.5	-	protein_coding	KNOWN	RP11-812E19.9	1	2	0.017753
chr16	33848476	33848644	33848560	ENSG00000270924.1	-	unprocessed_pseudogene	KNOWN	RP11-812E19.13	1	1	0.017753
chr16	33851785	33852069	33851927	ENSG00000271691.1	-	unprocessed_pseudogene	KNOWN	RP11-812E19.12	1	2	-0.057386
chr16	33857935	33858864	33858399	ENSG00000260312.1	-	lincRNA	KNOWN	RP11-812E19.7	1	3	-0.057386
chr16	33858896	33859352	33859124	ENSG00000270318.1	-	IG_V_pseudogene	KNOWN	IGHV3OR16-11	1	2	-0.057386
chr16	33875039	33875468	33875253	ENSG00000260525.1	-	unprocessed_pseudogene	KNOWN	RP11-812E19.10	1	2	-0.314778
chr16	33907419	33937167	33922293	ENSG00000260781.1	-	transcribed_unprocessed_pseudogene	KNOWN	ARHGAP23P1	2	15	0.307844
chr16	33938337	33938799	33938568	ENSG00000271620.1	-	IG_V_pseudogene	KNOWN	IGHV3OR16-7	1	2	0.722626
chr16	33948278	33948548	33948413	ENSG00000261607.1	-	unprocessed_pseudogene	KNOWN	RP11-812E19.5	1	1	0.722626
chr16	33949976	33950420	33950198	ENSG00000259842.2	-	unprocessed_pseudogene	KNOWN	IGHV3OR16-16	1	2	0.075448
chr16	33965655	33966091	33965873	ENSG00000270401.1	-	unprocessed_pseudogene	KNOWN	RP11-812E19.14	1	2	0.040091
chr16	33972912	33976346	33974629	ENSG00000205452.4	-	lincRNA	KNOWN	RP11-812E19.3	3	5	0.221424
chr16	33976039	33987630	33981834	ENSG00000198555.7	+	unprocessed_pseudogene	KNOWN	RP11-598D12.4	1	15	0.221424
chr16	33988406	33991551	33989978	ENSG00000261217.2	-	unprocessed_pseudogene	KNOWN	BCAP31P1	1	4	0.436815
chr16	34013394	34013830	34013612	ENSG00000259990.2	-	unprocessed_pseudogene	KNOWN	RP11-598D12.1	1	2	0.397405
chr16	34015260	34015477	34015368	ENSG00000283065.1	+	processed_pseudogene	KNOWN	RP11-598D12.5	1	1	0.397405
chr16	34051140	34051363	34051251	ENSG00000261197.2	+	processed_pseudogene	KNOWN	RP11-598D12.2	1	1	-0.011844
chr16	34120470	34120677	34120573	ENSG00000262561.1	+	processed_pseudogene	KNOWN	CTD-2522B17.8	1	1	0.024878
chr16	34135736	34136792	34136264	ENSG00000261440.1	-	processed_pseudogene	KNOWN	DUX4L45	1	1	-0.073067
chr16	34139189	34139543	34139366	ENSG00000260087.1	+	processed_pseudogene	KNOWN	PCMTD1P2	1	1	-0.073067
chr16	34141256	34142006	34141631	ENSG00000259987.1	-	processed_pseudogene	KNOWN	DUX4L46	1	1	-0.073067
chr16	34142456	34142849	34142652	ENSG00000260207.1	+	processed_pseudogene	KNOWN	DUX4L47	1	1	-0.073067
chr16	34143482	34143554	34143518	ENSG00000265616.1	-	miRNA	NOVEL	AC136932.2	1	1	-0.073067
chr16	34158585	34160036	34159310	ENSG00000256642.1	-	lincRNA	KNOWN	LINC00273	1	1	0.225616
chr16	34159185	34159299	34159242	ENSG00000207986.1	+	miRNA	NOVEL	AC136932.1	1	1	0.225616
chr16	34162959	34163110	34163034	ENSG00000200434.1	+	rRNA	KNOWN	RNA5-8SP2	1	1	0.225616
chr16	34266041	34268649	34267345	ENSG00000279800.2	-	processed_pseudogene	KNOWN	BCLAF1P2	1	1	0.143920
chr16	34941977	34943880	34942928	ENSG00000279165.1	+	TEC	KNOWN	CTD-2144E22.9	1	1	-0.049254
chr16	34978744	34979844	34979294	ENSG00000260854.1	-	lincRNA	KNOWN	CTD-2144E22.8	1	2	0.152874
chr16	35021749	35024229	35022989	ENSG00000179755.3	+	lincRNA	KNOWN	CTD-2144E22.5	1	1	-0.121002
chr16	35022851	35024250	35023550	ENSG00000261566.1	-	lincRNA	KNOWN	CTD-2144E22.6	1	2	-0.121002
chr16	35023339	35023765	35023552	ENSG00000262885.1	+	processed_pseudogene	KNOWN	CTD-2144E22.11	1	1	-0.121002
chr16	35040164	35084313	35062238	ENSG00000216671.6	+	unprocessed_pseudogene	KNOWN	CCNYL3	1	9	0.026443
chr16	35068211	35085060	35076635	ENSG00000278138.2	+	unprocessed_pseudogene	KNOWN	CLUHP11	1	8	0.195122
chr16	35085896	35086119	35086007	ENSG00000261053.1	+	processed_pseudogene	KNOWN	NAMPTP3	1	1	0.219542
chr16	35090501	35104834	35097667	ENSG00000260809.1	+	unprocessed_pseudogene	KNOWN	VPS35P1	1	11	-0.154169
chr16	35118238	35118956	35118597	ENSG00000259979.1	-	processed_pseudogene	KNOWN	VN1R68P	1	1	-0.217336
chr16	35134514	35135075	35134794	ENSG00000260724.1	+	processed_pseudogene	KNOWN	VN1R69P	1	1	-0.215332
chr16	35143722	35144881	35144301	ENSG00000261800.1	+	lincRNA	KNOWN	RP11-244B22.11	1	2	-0.215332
chr16	35148636	35154366	35151501	ENSG00000280180.1	+	TEC	KNOWN	RP11-244B22.10	1	1	0.332018
chr16	35169692	35170241	35169966	ENSG00000261461.1	-	processed_pseudogene	KNOWN	UBE2MP1	1	1	0.202276
chr16	35173316	35174093	35173704	ENSG00000261608.1	+	processed_pseudogene	KNOWN	SLC25A1P4	1	1	-0.179035
chr16	35192687	35195661	35194174	ENSG00000260073.2	-	lincRNA	KNOWN	RP11-488I20.9	1	1	0.502925
chr16	35193335	35193734	35193534	ENSG00000260590.1	+	processed_pseudogene	KNOWN	RP11-244B22.7	1	1	0.502925
chr16	35195779	35197544	35196661	ENSG00000261398.1	+	lincRNA	KNOWN	RP11-244B22.6	1	1	0.502925
chr16	35207903	35208236	35208069	ENSG00000261274.1	-	processed_pseudogene	KNOWN	TP53TG3GP	1	1	0.502925
chr16	35207937	35284146	35246041	ENSG00000260958.2	+	lincRNA	KNOWN	RP11-488I20.8	2	4	-0.072920
chr16	35208506	35208571	35208538	ENSG00000264479.1	+	miRNA	NOVEL	AC023824.1	1	1	0.502925
chr16	35221583	35222048	35221815	ENSG00000260967.1	-	processed_pseudogene	KNOWN	RARRES2P5	1	1	0.135493
chr16	35232412	35235984	35234198	ENSG00000260984.1	-	unprocessed_pseudogene	KNOWN	FGFR3P5	1	2	-0.194312
chr16	35245916	35247534	35246725	ENSG00000259897.2	-	unprocessed_pseudogene	KNOWN	FRG2JP	1	4	-0.194312
chr16	35255192	35255633	35255412	ENSG00000261010.1	-	processed_pseudogene	KNOWN	RARRES2P6	1	1	-0.098339
chr16	35258630	35259629	35259129	ENSG00000261752.1	+	processed_pseudogene	KNOWN	AGGF1P8	1	1	-0.098339
chr16	35335277	35336889	35336083	ENSG00000260846.2	-	unprocessed_pseudogene	KNOWN	FRG2HP	1	4	-0.343656
chr16	35344091	35344559	35344325	ENSG00000261486.1	-	processed_pseudogene	KNOWN	RARRES2P9	1	1	-0.343656
chr16	35347385	35348297	35347841	ENSG00000260427.1	+	processed_pseudogene	KNOWN	AGGF1P9	1	1	-0.343656
chr16	35352482	35353022	35352752	ENSG00000260480.1	+	processed_pseudogene	KNOWN	C2orf69P4	1	1	-0.587608
chr16	35363412	35390584	35376998	ENSG00000259841.6	+	lincRNA	KNOWN	LINC01566	2	9	-0.154643
chr16	35384144	35385086	35384615	ENSG00000260291.1	-	unprocessed_pseudogene	KNOWN	FRG2GP	1	2	-0.007544
chr16	35389203	35390003	35389603	ENSG00000261689.1	-	processed_pseudogene	KNOWN	AGGF1P4	1	1	-0.009049
chr16	35405747	35407349	35406548	ENSG00000260598.1	-	unprocessed_pseudogene	KNOWN	FRG2IP	1	4	-0.308546
chr16	35414279	35414747	35414513	ENSG00000260812.1	-	processed_pseudogene	KNOWN	RARRES2P7	1	1	-0.465786
chr16	35420291	35421209	35420750	ENSG00000260680.1	+	processed_pseudogene	KNOWN	AGGF1P5	1	1	-0.465786
chr16	35425364	35426483	35425923	ENSG00000261299.1	+	processed_pseudogene	KNOWN	C2orf69P3	1	1	-0.465786
chr16	35435303	35436341	35435822	ENSG00000278681.2	-	unprocessed_pseudogene	KNOWN	RP11-80F22.16	1	2	-0.303937
chr16	35446898	35449411	35448154	ENSG00000214581.5	-	transcribed_processed_pseudogene	KNOWN	ZNF971P	2	3	-0.303937
chr16	35477414	35480481	35478947	ENSG00000261711.6	-	transcribed_unprocessed_pseudogene	KNOWN	FRG2DP	3	4	-0.163005
chr16	35485766	35486225	35485995	ENSG00000260153.1	-	processed_pseudogene	KNOWN	RARRES2P10	1	1	-0.163005
chr16	35489237	35490212	35489724	ENSG00000259836.1	+	processed_pseudogene	KNOWN	AGGF1P6	1	1	-0.172330
chr16	35491174	35492395	35491784	ENSG00000261350.1	-	lincRNA	KNOWN	RP11-80F22.14	1	2	-0.205689
chr16	35492324	35493446	35492885	ENSG00000260341.1	+	processed_pseudogene	KNOWN	C2orf69P2	1	1	-0.205689
chr16	35493754	35496457	35495105	ENSG00000261445.1	-	lincRNA	KNOWN	RP11-80F22.4	1	3	-0.205689
chr16	35505093	35506462	35505777	ENSG00000260857.2	-	lincRNA	KNOWN	RP11-80F22.15	1	2	-0.205689
chr16	35506592	35507170	35506881	ENSG00000269622.1	-	transcribed_processed_pseudogene	KNOWN	TP53TG3HP	2	1	-0.205689
chr16	35528367	35529318	35528842	ENSG00000282946.1	-	processed_pseudogene	KNOWN	RP11-80F22.8	1	1	0.008576
chr16	35543279	35543645	35543462	ENSG00000259996.1	-	processed_pseudogene	KNOWN	RARRES2P8	1	1	-0.228097
chr16	35547917	35548829	35548373	ENSG00000260994.1	+	processed_pseudogene	KNOWN	AGGF1P7	1	1	-0.228097
chr16	35552909	35554001	35553455	ENSG00000261046.1	+	processed_pseudogene	KNOWN	C2orf69P1	1	1	0.128288
chr16	35574834	35575494	35575164	ENSG00000260134.1	+	processed_pseudogene	KNOWN	C1QL1P1	1	1	0.334742
chr16	35636687	35645180	35640933	ENSG00000260746.2	-	unprocessed_pseudogene	KNOWN	KIF18BP1	1	14	0.131520
chr16	35640029	35640582	35640305	ENSG00000259791.1	+	lincRNA	KNOWN	RP11-14K3.7	1	1	0.131520
chr16	35722268	35722529	35722398	ENSG00000260522.1	-	processed_pseudogene	KNOWN	RP11-352B15.5	1	1	-0.179921
chr16	35734393	35734504	35734448	ENSG00000251915.1	+	rRNA	KNOWN	RNA5SP406	1	1	0.303496
chr16	35734639	35734748	35734693	ENSG00000222207.1	+	rRNA	KNOWN	RNA5SP407	1	1	0.303496
chr16	35735372	35735471	35735421	ENSG00000251924.1	+	rRNA	KNOWN	RNA5SP408	1	1	0.303496
chr16	35735625	35735733	35735679	ENSG00000252624.1	+	rRNA	KNOWN	RNA5SP409	1	1	0.303496
chr16	35743268	35756515	35749891	ENSG00000261122.6	+	lincRNA	KNOWN	FLJ26245	3	4	0.390824
chr16	35745989	35746094	35746041	ENSG00000252094.1	+	rRNA	KNOWN	RNA5SP410	1	1	0.303496
chr16	35746523	35746636	35746579	ENSG00000276599.1	+	rRNA	KNOWN	RNA5SP411	1	1	0.303496
chr16	35746772	35746894	35746833	ENSG00000277004.1	+	rRNA	KNOWN	RNA5SP412	1	1	0.303496
chr16	35747032	35747140	35747086	ENSG00000252182.1	+	rRNA	KNOWN	RNA5SP413	1	1	0.303496
chr16	35748520	35748655	35748587	ENSG00000274228.1	+	rRNA	KNOWN	RNA5SP414	1	1	0.303496
chr16	35750061	35750175	35750118	ENSG00000253055.1	+	rRNA	KNOWN	RNA5SP415	1	1	0.481034
chr16	35751574	35751684	35751629	ENSG00000252647.1	+	rRNA	KNOWN	RNA5SP416	1	1	0.481034
chr16	35751828	35751935	35751881	ENSG00000252268.1	+	rRNA	KNOWN	RNA5SP417	1	1	0.481034
chr16	35752826	35752942	35752884	ENSG00000251760.1	+	rRNA	KNOWN	RNA5SP418	1	1	0.481034
chr16	35753796	35753930	35753863	ENSG00000251717.1	+	rRNA	KNOWN	RNA5SP419	1	1	0.481034
chr16	35754046	35754182	35754114	ENSG00000252806.1	+	rRNA	KNOWN	RNA5SP420	1	1	0.481034
chr16	35754555	35754688	35754621	ENSG00000252673.1	+	rRNA	KNOWN	RNA5SP421	1	1	0.481034
chr16	35754923	35755033	35754978	ENSG00000252587.1	+	rRNA	KNOWN	RNA5SP422	1	1	0.481034
chr16	35755177	35755285	35755231	ENSG00000252936.1	+	rRNA	KNOWN	RNA5SP423	1	1	0.481034
chr16	35785569	35786887	35786228	ENSG00000260611.1	-	lincRNA	KNOWN	RP11-352B15.2	1	1	-0.289879
chr16	35802869	35803280	35803074	ENSG00000261620.1	-	processed_pseudogene	KNOWN	HMGN2P41	1	1	-0.039652
chr16	35836886	35837732	35837309	ENSG00000261515.1	+	processed_pseudogene	KNOWN	VN1R70P	1	1	-0.472961
chr16	35879036	35879498	35879267	ENSG00000261782.1	-	processed_pseudogene	KNOWN	RP11-43P5.1	1	1	-0.223313
chr16	35903117	35904916	35904016	ENSG00000279666.1	+	TEC	KNOWN	RP11-43P5.3	1	1	-0.504111
chr16	35912120	35912516	35912318	ENSG00000261084.1	+	processed_pseudogene	KNOWN	PPP1R1AP2	1	1	-0.264152
chr16	46469341	46569097	46519219	ENSG00000261239.6	-	transcribed_unprocessed_pseudogene	KNOWN	ANKRD26P1	6	17	-0.336597
chr16	46556089	46556191	46556140	ENSG00000199448.1	-	snRNA	KNOWN	RNU6-845P	1	1	-0.380597
chr16	46571537	46572136	46571836	ENSG00000261356.2	+	processed_pseudogene	KNOWN	RP11-46D6.5	1	1	-0.261645
chr16	46573763	46575094	46574428	ENSG00000260251.1	+	unprocessed_pseudogene	KNOWN	RP11-46D6.4	1	2	-0.261645
chr16	46580554	46621626	46601090	ENSG00000171241.8	-	protein_coding	KNOWN	SHCBP1	7	13	-0.191385
chr16	46622861	46624451	46623656	ENSG00000261512.2	-	lincRNA	KNOWN	RP11-46D6.1	2	2	0.165158
chr16	46626404	46626992	46626698	ENSG00000259856.1	-	processed_pseudogene	KNOWN	RAB43P1	1	1	0.165158
chr16	46649126	46649849	46649487	ENSG00000260909.1	+	unprocessed_pseudogene	KNOWN	RP11-93O14.1	1	2	0.439375
chr16	46656132	46689518	46672825	ENSG00000069329.15	-	protein_coding	KNOWN	VPS35	11	17	0.261152
chr16	46660696	46661591	46661143	ENSG00000261131.1	-	sense_intronic	KNOWN	RP11-93O14.2	1	2	0.084256
chr16	46673443	46673927	46673685	ENSG00000280376.1	-	TEC	KNOWN	RP11-93O14.3	1	1	0.386826
chr16	46689643	46698394	46694018	ENSG00000091651.8	+	protein_coding	KNOWN	ORC6	9	7	0.141906
chr16	46703369	46790407	46746888	ENSG00000140795.12	-	protein_coding	KNOWN	MYLK3	7	13	0.405932
chr16	46789898	46792040	46790969	ENSG00000260782.1	+	processed_pseudogene	KNOWN	RP11-480G7.2	1	2	0.255868
chr16	46796607	46831411	46814009	ENSG00000155330.9	-	protein_coding	KNOWN	C16orf87	4	5	0.164834
chr16	46842632	46844618	46843625	ENSG00000260889.1	-	processed_pseudogene	KNOWN	CKBP1	1	2	0.270530
chr16	46850999	46851254	46851126	ENSG00000261725.1	+	processed_pseudogene	KNOWN	RP11-480G7.3	1	1	0.267310
chr16	46884378	46931297	46907837	ENSG00000166123.13	+	protein_coding	KNOWN	GPT2	5	12	0.587954
chr16	46955362	46973788	46964575	ENSG00000069345.11	-	protein_coding	KNOWN	DNAJA2	4	9	0.058098
chr16	46973989	46978983	46976486	ENSG00000261173.1	+	antisense	KNOWN	RP11-169E6.1	1	2	0.385491
chr16	47004513	47035385	47019949	ENSG00000259821.1	+	lincRNA	KNOWN	RP11-169E6.4	1	3	0.343167
chr16	47013957	47014365	47014161	ENSG00000259983.1	+	transcribed_processed_pseudogene	KNOWN	RP11-169E6.3	1	1	0.441799
chr16	47077703	47143997	47110850	ENSG00000171208.9	-	protein_coding	KNOWN	NETO2	5	9	-0.022768
chr16	47144323	47162747	47153535	ENSG00000260281.5	+	antisense	KNOWN	ITFG1-AS1	2	5	0.072192
chr16	47150132	47150566	47150349	ENSG00000239840.1	-	processed_pseudogene	KNOWN	RPL23AP72	1	1	0.133097
chr16	47154387	47464149	47309268	ENSG00000129636.12	-	protein_coding	KNOWN	ITFG1	12	18	-0.125859
chr16	47196311	47202429	47199370	ENSG00000260744.1	+	antisense	KNOWN	RP11-329J18.3	1	2	-0.029753
chr16	47218026	47218768	47218397	ENSG00000279509.1	+	TEC	KNOWN	RP11-329J18.5	1	1	-0.086345
chr16	47262741	47263500	47263120	ENSG00000260012.1	+	processed_pseudogene	KNOWN	RP11-329J18.4	1	1	-0.165989
chr16	47299447	47317814	47308630	ENSG00000261369.1	+	antisense	KNOWN	RP11-474B12.1	1	3	-0.095046
chr16	47313027	47313121	47313074	ENSG00000222767.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.169471
chr16	47450347	47450461	47450404	ENSG00000212290.1	-	rRNA	KNOWN	RNA5SP424	1	1	-0.400777
chr16	47461123	47701523	47581323	ENSG00000102893.15	+	protein_coding	KNOWN	PHKB	17	32	-0.013261
chr16	47505432	47505543	47505487	ENSG00000222268.1	+	rRNA	KNOWN	RNA5SP425	1	1	-0.142473
chr16	47529190	47529916	47529553	ENSG00000262038.1	+	sense_intronic	KNOWN	RP11-177N22.3	1	2	0.054998
chr16	47561307	47562480	47561893	ENSG00000259866.1	-	processed_pseudogene	KNOWN	RP11-177N22.2	1	1	0.182662
chr16	47565090	47566884	47565987	ENSG00000261336.1	-	processed_pseudogene	KNOWN	EIF4BP5	1	1	0.182662
chr16	47598654	47598996	47598825	ENSG00000259918.1	-	processed_pseudogene	KNOWN	NDUFA5P11	1	1	0.023973
chr16	47724568	47908431	47816499	ENSG00000261231.6	+	lincRNA	KNOWN	RP11-523L20.2	2	6	-0.093773
chr16	47760780	47760921	47760850	ENSG00000260497.1	-	processed_pseudogene	KNOWN	CTB-55P19.1	1	1	-0.523344
chr16	47849314	47887130	47868222	ENSG00000261325.1	-	lincRNA	KNOWN	AC140542.2	1	2	0.028711
chr16	47965672	47971687	47968679	ENSG00000260450.1	+	lincRNA	KNOWN	RP11-523L20.1	1	3	0.046319
chr16	48059671	48059995	48059833	ENSG00000261017.1	-	processed_pseudogene	KNOWN	RP11-3M1.3	1	1	0.091992
chr16	48082973	48156018	48119495	ENSG00000140798.15	-	protein_coding	KNOWN	ABCC12	12	29	0.317283
chr16	48164952	48167238	48166095	ENSG00000261538.1	-	sense_overlapping	KNOWN	RP11-3M1.1	1	3	0.367270
chr16	48166910	48247568	48207239	ENSG00000121270.15	-	protein_coding	KNOWN	ABCC11	9	30	0.121502
chr16	48244296	48363122	48303709	ENSG00000102910.13	+	protein_coding	KNOWN	LONP2	9	15	0.128462
chr16	48334471	48334854	48334662	ENSG00000240793.1	-	processed_pseudogene	KNOWN	UBA52P8	1	1	-0.034838
chr16	48343755	48346058	48344906	ENSG00000280067.1	-	TEC	KNOWN	CTD-2600H12.2	1	1	-0.034838
chr16	48356364	48448402	48402383	ENSG00000196470.11	-	protein_coding	KNOWN	SIAH1	8	7	0.203033
chr16	48421127	48421203	48421165	ENSG00000239138.1	-	miRNA	NOVEL	AC023818.1	1	1	0.336299
chr16	48432927	48433208	48433067	ENSG00000275909.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.430161
chr16	48447904	48448398	48448151	ENSG00000261802.1	-	sense_overlapping	KNOWN	RP11-44I10.6	1	2	0.430161
chr16	48470953	48471133	48471043	ENSG00000260688.1	-	processed_pseudogene	KNOWN	RP11-44I10.5	1	1	0.108294
chr16	48496990	48498601	48497795	ENSG00000260347.1	+	processed_pseudogene	KNOWN	MOCS1P1	1	1	0.426411
chr16	48538726	48620148	48579437	ENSG00000102921.7	-	protein_coding	KNOWN	N4BP1	6	7	0.261421
chr16	48559661	48587403	48573532	ENSG00000261267.1	+	antisense	KNOWN	RP11-44I10.3	1	3	0.192298
chr16	48577524	48578369	48577946	ENSG00000243609.1	-	processed_pseudogene	KNOWN	RPS2P44	1	1	0.141745
chr16	48600176	48600644	48600410	ENSG00000260033.1	+	processed_pseudogene	KNOWN	CTC-527H23.1	1	1	0.146440
chr16	48620319	48622033	48621176	ENSG00000259912.1	+	lincRNA	KNOWN	CTC-527H23.2	1	2	0.257276
chr16	48623436	48744921	48684178	ENSG00000260086.2	+	lincRNA	KNOWN	RP11-42I10.1	3	4	0.045717
chr16	48637143	48638719	48637931	ENSG00000260052.1	+	lincRNA	KNOWN	CTC-527H23.3	1	2	0.518257
chr16	48640473	48641052	48640762	ENSG00000272545.1	+	lincRNA	KNOWN	CTC-527H23.4	1	1	0.518257
chr16	48651331	48651423	48651377	ENSG00000220993.1	+	miRNA	NOVEL	AC007611.1	1	1	-0.247318
chr16	48718083	48719143	48718613	ENSG00000260726.2	+	processed_pseudogene	KNOWN	KLF8P1	1	1	-0.076937
chr16	48731704	48731801	48731752	ENSG00000222170.1	-	snRNA	KNOWN	RNU6-257P	1	1	-0.025502
chr16	48849919	48850015	48849967	ENSG00000260184.1	-	processed_pseudogene	KNOWN	RP11-42I10.3	1	1	-0.335547
chr16	49066567	49066729	49066648	ENSG00000260067.1	-	processed_pseudogene	KNOWN	MTND4LP25	1	1	-0.135242
chr16	49159508	49162023	49160765	ENSG00000261421.1	+	lincRNA	KNOWN	RP11-22D3.1	1	2	-0.335690
chr16	49170552	49171786	49171169	ENSG00000261815.1	+	lincRNA	KNOWN	RP11-22D3.2	1	1	-0.344107
chr16	49277917	49281831	49279874	ENSG00000102924.11	-	protein_coding	KNOWN	CBLN1	3	4	0.091992
chr16	49287430	49290227	49288828	ENSG00000260614.1	+	antisense	KNOWN	RP11-491F9.1	1	3	0.051936
chr16	49294886	49296736	49295811	ENSG00000259957.2	+	lincRNA	KNOWN	RP11-491F9.8	1	1	-0.399397
chr16	49297143	49299762	49298452	ENSG00000280189.1	+	TEC	KNOWN	RP11-491F9.2	1	1	-0.399397
chr16	49336683	49337345	49337014	ENSG00000259839.1	+	lincRNA	KNOWN	RP11-491F9.6	1	2	-0.155021
chr16	49337167	49338993	49338080	ENSG00000260769.1	+	lincRNA	KNOWN	RP11-491F9.5	1	1	-0.155021
chr16	49341663	49350554	49346108	ENSG00000279249.1	+	TEC	KNOWN	RP11-491F9.3	1	1	-0.129585
chr16	49373823	49399431	49386627	ENSG00000166152.3	+	protein_coding	KNOWN	C16orf78	1	5	-0.042827
chr16	49442910	49454078	49448494	ENSG00000262950.1	-	lincRNA	KNOWN	RP11-189E14.5	1	4	0.159712
chr16	49454229	49457269	49455749	ENSG00000263110.1	+	lincRNA	KNOWN	RP11-189E14.3	1	2	0.277405
chr16	49466106	49469875	49467990	ENSG00000261623.1	+	lincRNA	KNOWN	RP11-189E14.4	1	2	0.277405
chr16	49487524	49857919	49672721	ENSG00000102935.11	-	protein_coding	KNOWN	ZNF423	8	9	0.216912
chr16	49517762	49518601	49518181	ENSG00000260089.2	-	processed_pseudogene	KNOWN	ADAM3B	1	1	0.247270
chr16	49679220	49679301	49679260	ENSG00000221134.1	+	miRNA	NOVEL	AC007339.1	1	1	0.385491
chr16	49680190	49680274	49680232	ENSG00000276695.1	+	miRNA	NOVEL	AC007339.2	1	1	0.385491
chr16	49708006	49708243	49708124	ENSG00000260024.1	+	processed_pseudogene	KNOWN	MRPS21P7	1	1	0.314384
chr16	49711273	49711914	49711593	ENSG00000280131.1	+	TEC	KNOWN	CTD-2595P9.2	1	1	-0.084886
chr16	49764454	49764688	49764571	ENSG00000259978.1	+	processed_pseudogene	KNOWN	MRPS21P8	1	1	0.442324
chr16	49816685	49816784	49816734	ENSG00000265708.1	+	miRNA	NOVEL	AC027348.1	1	1	0.334193
chr16	49847018	49847632	49847325	ENSG00000275155.1	-	sense_intronic	KNOWN	CTD-2595P9.4	1	1	0.395384
chr16	49900019	49900524	49900271	ENSG00000279842.1	+	TEC	KNOWN	RP11-305A4.2	1	1	-0.028638
chr16	49920730	49924154	49922442	ENSG00000261751.1	-	lincRNA	KNOWN	RP11-305A4.3	1	2	0.273018
chr16	49935028	49935352	49935190	ENSG00000244551.2	+	processed_pseudogene	KNOWN	RPL34P29	1	1	0.085389
chr16	50024410	50037088	50030749	ENSG00000205423.11	+	protein_coding	KNOWN	CNEP1R1	11	7	0.009754
chr16	50046429	50066224	50056326	ENSG00000259843.2	-	antisense	KNOWN	RP11-429P3.3	1	3	0.216033
chr16	50046496	50047798	50047147	ENSG00000261835.1	+	unprocessed_pseudogene	KNOWN	RP11-429P3.2	1	2	0.012023
chr16	50054143	50054430	50054286	ENSG00000273829.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.260921
chr16	50058150	50059231	50058690	ENSG00000260298.2	-	transcribed_processed_pseudogene	KNOWN	ACTG1P16	1	1	0.260921
chr16	50065941	50106387	50086164	ENSG00000155393.12	+	protein_coding	KNOWN	HEATR3	5	15	0.305010
chr16	50072862	50074986	50073924	ENSG00000279356.1	+	TEC	KNOWN	RP11-429P3.8	1	1	0.322422
chr16	50098264	50098358	50098311	ENSG00000202124.1	+	misc_RNA	KNOWN	RNY4P3	1	1	0.294677
chr16	50100339	50121943	50111141	ENSG00000260381.2	-	antisense	KNOWN	RP11-429P3.5	1	3	0.154955
chr16	50151280	50151577	50151428	ENSG00000260031.1	-	processed_pseudogene	KNOWN	RPL10P14	1	1	0.292131
chr16	50151642	50151731	50151686	ENSG00000252526.1	-	snoRNA	NOVEL	SNORA70	1	1	0.292131
chr16	50152918	50235310	50194114	ENSG00000121274.12	+	protein_coding	KNOWN	PAPD5	4	13	0.345207
chr16	50246137	50318135	50282136	ENSG00000121281.12	+	protein_coding	KNOWN	ADCY7	15	26	0.709532
chr16	50292616	50292675	50292645	ENSG00000274969.1	+	miRNA	KNOWN	MIR6771	1	1	0.864581
chr16	50313487	50368934	50341210	ENSG00000166164.15	-	protein_coding	KNOWN	BRD7	7	17	0.278309
chr16	50368580	50371480	50370030	ENSG00000261393.1	+	antisense	KNOWN	RP11-21B23.1	1	2	0.032023
chr16	50390916	50395133	50393024	ENSG00000261092.1	-	lincRNA	KNOWN	RP11-21B23.2	1	2	0.455462
chr16	50407701	50408513	50408107	ENSG00000260573.1	+	lincRNA	KNOWN	RP11-21B23.3	1	2	0.455462
chr16	50548330	50640739	50594534	ENSG00000140807.5	+	protein_coding	KNOWN	NKD1	3	10	0.290868
chr16	50551824	50553940	50552882	ENSG00000260029.2	-	antisense	KNOWN	RP11-401P9.1	1	2	0.379274
chr16	50555355	50558719	50557037	ENSG00000278909.1	+	TEC	KNOWN	RP11-401P9.7	1	1	0.379274
chr16	50606076	50613684	50609880	ENSG00000205414.1	-	antisense	KNOWN	RP11-401P9.6	1	2	0.292116
chr16	50645809	50649249	50647529	ENSG00000261685.2	+	lincRNA	KNOWN	RP11-401P9.4	1	1	0.349002
chr16	50666211	50671639	50668925	ENSG00000260249.2	+	antisense	KNOWN	RP11-401P9.5	2	3	0.204735
chr16	50666300	50681353	50673826	ENSG00000167208.14	-	protein_coding	KNOWN	SNX20	5	5	0.177049
chr16	50693603	50733077	50713340	ENSG00000167207.11	+	protein_coding	KNOWN	NOD2	10	12	0.247944
chr16	50712844	50713589	50713216	ENSG00000270120.1	+	sense_intronic	KNOWN	RP11-327F22.6	1	1	0.225053
chr16	50735713	50740716	50738214	ENSG00000261644.1	-	antisense	KNOWN	RP11-327F22.2	1	2	-0.152113
chr16	50740910	50742815	50741862	ENSG00000260929.1	-	antisense	KNOWN	RP11-327F22.1	1	2	-0.152113
chr16	50742050	50801935	50771992	ENSG00000083799.17	+	protein_coding	KNOWN	CYLD	16	20	-0.161112
chr16	50742305	50742377	50742341	ENSG00000264947.1	+	miRNA	KNOWN	MIR3181	1	1	-0.152113
chr16	50783859	50803338	50793598	ENSG00000260616.6	-	antisense	KNOWN	RP11-327F22.4	2	3	-0.207834
chr16	50806668	50807629	50807148	ENSG00000261703.1	+	lincRNA	KNOWN	RP11-327F22.5	1	2	-0.157528
chr16	50856614	50879278	50867946	ENSG00000260042.1	-	lincRNA	KNOWN	CTD-2034I21.1	1	2	0.044320
chr16	50869455	50869575	50869515	ENSG00000199771.1	-	rRNA	KNOWN	RNA5SP426	1	1	0.237109
chr16	50880209	50884101	50882155	ENSG00000263082.1	+	lincRNA	KNOWN	CTD-2034I21.2	1	2	-0.233778
chr16	50884209	50901061	50892635	ENSG00000261241.5	+	lincRNA	KNOWN	RP11-883G14.1	2	4	-0.093630
chr16	51017758	51035777	51026767	ENSG00000261637.1	+	lincRNA	KNOWN	RP11-883G14.2	2	3	-0.205060
chr16	51035118	51038764	51036941	ENSG00000260605.1	-	lincRNA	KNOWN	RP11-883G14.3	1	4	-0.113912
chr16	51054728	51056399	51055563	ENSG00000260620.1	-	lincRNA	KNOWN	RP11-883G14.4	1	2	-0.040315
chr16	51107571	51108021	51107796	ENSG00000261282.1	+	processed_pseudogene	KNOWN	SOD1P2	1	1	-0.056710
chr16	51135975	51151367	51143671	ENSG00000103449.11	-	protein_coding	KNOWN	SALL1	5	3	-0.047223
chr16	51149239	51149819	51149529	ENSG00000261238.1	+	antisense	KNOWN	AC009166.5	1	2	-0.079961
chr16	51176066	51178898	51177482	ENSG00000280344.1	+	TEC	KNOWN	AC009166.7	1	1	0.277295
chr16	51244054	51244123	51244088	ENSG00000261047.1	+	processed_pseudogene	KNOWN	AC137527.2	1	1	0.272564
chr16	51277852	51279112	51278482	ENSG00000260818.2	+	processed_pseudogene	KNOWN	UNGP1	1	1	-0.342029
chr16	51354456	51356532	51355494	ENSG00000260850.1	-	lincRNA	KNOWN	RP11-437L7.1	1	2	0.168954
chr16	51645756	51647132	51646444	ENSG00000224578.4	+	transcribed_processed_pseudogene	KNOWN	HNRNPA1P48	2	1	0.058439
chr16	51671236	51671563	51671399	ENSG00000223168.1	-	misc_RNA	KNOWN	RN7SKP142	1	1	-0.084558
chr16	51762519	51773173	51767846	ENSG00000260057.5	+	lincRNA	KNOWN	LINC01571	2	3	-0.163574
chr16	52005487	52078474	52041980	ENSG00000261190.5	-	processed_transcript	KNOWN	C16orf97	6	8	-0.357438
chr16	52078622	52080489	52079555	ENSG00000261470.1	+	antisense	KNOWN	RP11-152O14.4	1	2	-0.726982
chr16	52081568	52082096	52081832	ENSG00000279779.1	-	TEC	KNOWN	RP11-152O14.3	1	1	-0.726982
chr16	52083065	52085109	52084087	ENSG00000260268.5	-	lincRNA	KNOWN	LINC00919	2	3	-0.726982
chr16	52085280	52099067	52092173	ENSG00000261749.2	+	lincRNA	KNOWN	RP11-152O14.1	1	3	-0.293522
chr16	52198012	52227956	52212984	ENSG00000260975.1	-	lincRNA	KNOWN	RP11-142G1.3	1	2	-0.338272
chr16	52238082	52269440	52253761	ENSG00000260478.1	+	lincRNA	KNOWN	RP11-142G1.1	1	5	-0.420294
chr16	52255451	52255549	52255500	ENSG00000221515.1	-	miRNA	NOVEL	AC007333.1	1	1	-0.470741
chr16	52258564	52280638	52269601	ENSG00000260887.2	+	lincRNA	KNOWN	CASC22	2	3	-0.391025
chr16	52436772	52437474	52437123	ENSG00000279427.1	-	TEC	KNOWN	RP11-132F7.2	1	1	0.047598
chr16	52438005	52547802	52492903	ENSG00000103460.16	-	protein_coding	KNOWN	TOX3	5	8	-0.329561
chr16	52552090	52652105	52602097	ENSG00000249231.7	-	lincRNA	KNOWN	CASC16	3	5	-0.095545
chr16	52607349	52613908	52610628	ENSG00000260963.1	+	lincRNA	KNOWN	RP11-297L17.2	3	3	-0.313227
chr16	52607762	52608158	52607960	ENSG00000260393.1	-	lincRNA	KNOWN	RP11-297L17.3	1	2	-0.215742
chr16	52622115	52631088	52626601	ENSG00000261261.2	+	lincRNA	KNOWN	RP11-297L17.4	2	4	-0.317945
chr16	52655307	52656045	52655676	ENSG00000234337.4	+	processed_pseudogene	KNOWN	RP11-297L17.6	1	1	-0.106337
chr16	52934813	52935635	52935224	ENSG00000260326.1	+	processed_pseudogene	KNOWN	PHBP21	1	1	-0.272772
chr16	52942139	52943464	52942801	ENSG00000260258.2	+	transcribed_processed_pseudogene	KNOWN	RP11-467J12.2	2	1	-0.272772
chr16	53010395	53011286	53010840	ENSG00000260939.1	-	processed_pseudogene	KNOWN	RP11-467J12.3	1	1	0.180926
chr16	53035690	53052873	53044281	ENSG00000261550.1	-	antisense	KNOWN	RP11-467J12.4	1	3	0.322482
chr16	53043066	53044216	53043641	ENSG00000277639.1	-	lincRNA	KNOWN	RP11-295M3.4	1	1	0.280601
chr16	53055033	53329150	53192091	ENSG00000177200.15	+	protein_coding	KNOWN	CHD9	22	39	0.176184
chr16	53168522	53169450	53168986	ENSG00000261291.1	+	sense_intronic	KNOWN	RP11-295M3.2	1	2	0.165992
chr16	53207941	53226385	53217163	ENSG00000279018.1	-	protein_coding	KNOWN	AC007906.1	1	4	-0.024632
chr16	53227146	53227694	53227420	ENSG00000280227.1	+	TEC	KNOWN	RP11-454F8.3	1	1	-0.058149
chr16	53298224	53299792	53299008	ENSG00000261056.2	+	transcribed_processed_pseudogene	KNOWN	RP11-454F8.2	1	1	0.100503
chr16	53310797	53311989	53311393	ENSG00000279589.1	+	TEC	KNOWN	RP11-454F8.4	1	1	-0.022829
chr16	53334562	53334664	53334613	ENSG00000238645.1	+	snoRNA	NOVEL	snoU13	1	1	-0.599886
chr16	53337453	53337571	53337512	ENSG00000202193.1	+	rRNA	KNOWN	RNA5SP427	1	1	-0.599886
chr16	53362019	53363678	53362848	ENSG00000259962.1	-	unprocessed_pseudogene	KNOWN	RP11-44F14.4	1	4	0.321238
chr16	53364982	53373083	53369032	ENSG00000260078.3	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-44F14.1	2	6	0.224986
chr16	53373493	53384745	53379119	ENSG00000261804.1	+	lincRNA	KNOWN	RP11-44F14.2	2	3	0.068405
chr16	53386944	53389085	53388014	ENSG00000262714.1	+	lincRNA	KNOWN	RP11-44F14.8	1	1	0.068405
chr16	53389886	53390563	53390224	ENSG00000279741.1	+	TEC	KNOWN	RP11-44F14.9	1	1	-0.174622
chr16	53391089	53392473	53391781	ENSG00000280027.1	+	TEC	KNOWN	RP11-44F14.10	1	1	-0.223313
chr16	53433977	53491649	53462813	ENSG00000103479.14	+	protein_coding	KNOWN	RBL2	9	22	-0.042976
chr16	53443228	53443332	53443280	ENSG00000252569.1	-	snRNA	KNOWN	RNU6-1153P	1	1	0.069624
chr16	53448748	53449590	53449169	ENSG00000259926.1	+	sense_intronic	KNOWN	RP11-44F14.5	1	2	0.069624
chr16	53478957	53481550	53480253	ENSG00000279344.1	-	TEC	KNOWN	RP11-44F14.7	1	1	-0.142020
chr16	53487607	53489943	53488775	ENSG00000279722.1	-	TEC	KNOWN	RP11-44F14.6	1	1	-0.142020
chr16	53491040	53504411	53497725	ENSG00000166971.16	-	protein_coding	KNOWN	AKTIP	14	11	-0.429777
chr16	53597683	53703938	53650810	ENSG00000103494.12	-	protein_coding	KNOWN	RPGRIP1L	12	27	-0.062673
chr16	53628256	53628816	53628536	ENSG00000275191.1	-	sense_intronic	KNOWN	RP11-36I17.2	1	1	0.034111
chr16	53703963	54121941	53912952	ENSG00000140718.18	+	protein_coding	KNOWN	FTO	8	9	0.109885
chr16	53981229	53981912	53981570	ENSG00000261630.1	-	antisense	KNOWN	RP11-357N13.3	1	2	0.100870
chr16	53991012	53994454	53992733	ENSG00000280392.1	+	TEC	KNOWN	RP11-357N13.6	1	1	0.014916
chr16	53998313	53999969	53999141	ENSG00000260194.1	-	antisense	KNOWN	RP11-357N13.2	1	2	0.014916
chr16	54033997	54054583	54044290	ENSG00000261049.2	-	antisense	KNOWN	RP11-357N13.1	1	3	-0.047257
chr16	54039393	54040726	54040059	ENSG00000260936.1	+	sense_intronic	KNOWN	FTO-IT1	1	2	-0.026886
chr16	54114697	54114878	54114787	ENSG00000280454.1	-	pseudogene	NOVEL	AC007347.1	1	2	0.413920
chr16	54152855	54153448	54153151	ENSG00000275147.1	+	lincRNA	KNOWN	RP11-324D17.3	1	1	0.001794
chr16	54239693	54240654	54240173	ENSG00000259759.1	+	lincRNA	KNOWN	RP11-324D17.2	1	2	-0.001621
chr16	54245618	54270746	54258182	ENSG00000259517.2	-	lincRNA	KNOWN	RP11-324D17.1	1	3	0.269310
chr16	54283304	54286763	54285033	ENSG00000177508.11	-	protein_coding	KNOWN	IRX3	3	4	-0.064127
chr16	54290965	54292422	54291693	ENSG00000277559.1	+	lincRNA	KNOWN	RP11-434E6.4	1	1	0.748405
chr16	54366007	54370699	54368353	ENSG00000261803.1	-	lincRNA	KNOWN	RP11-434E6.2	2	2	0.493161
chr16	54847247	54848233	54847740	ENSG00000261171.1	-	lincRNA	KNOWN	RP11-1136G4.1	1	2	-0.097351
chr16	54851640	54852733	54852186	ENSG00000273615.1	-	lincRNA	KNOWN	RP11-1136G4.2	1	1	0.138685
chr16	54918863	54929189	54924026	ENSG00000245694.8	-	lincRNA	KNOWN	CRNDE	10	6	-0.010370
chr16	54930862	54934485	54932673	ENSG00000176842.14	+	protein_coding	KNOWN	IRX5	5	4	0.461226
chr16	54934913	54954665	54944789	ENSG00000259711.1	+	lincRNA	KNOWN	CTD-3032H12.2	1	2	0.417337
chr16	54937786	54938671	54938228	ENSG00000259725.1	-	lincRNA	KNOWN	CTD-3032H12.1	2	2	0.461226
chr16	55007982	55008306	55008144	ENSG00000260147.1	+	processed_pseudogene	KNOWN	MTND5P34	1	1	0.008576
chr16	55259969	55333588	55296778	ENSG00000259283.2	-	antisense	KNOWN	RP11-26L20.3	1	4	-0.065421
chr16	55291379	55291675	55291527	ENSG00000239555.3	-	misc_RNA	KNOWN	RN7SL841P	1	1	-0.265560
chr16	55323760	55330760	55327260	ENSG00000159387.7	+	protein_coding	KNOWN	IRX6	2	6	0.074512
chr16	55332355	55332967	55332661	ENSG00000263207.2	+	lincRNA	KNOWN	RP11-26L20.4	1	1	0.228771
chr16	55352721	55353088	55352904	ENSG00000240760.1	-	processed_pseudogene	KNOWN	RPL31P56	1	1	-0.118687
chr16	55389700	55506691	55448195	ENSG00000087245.12	+	protein_coding	KNOWN	MMP2	8	14	0.110374
chr16	55425574	55426130	55425852	ENSG00000274508.1	-	lincRNA	KNOWN	RP11-212I21.5	1	1	-0.025365
chr16	55426797	55462297	55444547	ENSG00000260135.6	-	lincRNA	KNOWN	RP11-212I21.2	3	6	-0.085611
chr16	55486618	55488777	55487697	ENSG00000279030.1	+	TEC	KNOWN	RP11-212I21.3	1	1	0.477282
chr16	55508998	55586670	55547834	ENSG00000087253.11	+	protein_coding	KNOWN	LPCAT2	9	14	0.085051
chr16	55538200	55542027	55540113	ENSG00000261997.1	+	lincRNA	KNOWN	RP11-212I21.4	1	1	-0.255932
chr16	55566672	55567687	55567179	ENSG00000256812.1	+	protein_coding	KNOWN	CAPNS2	1	1	0.030962
chr16	55655604	55706192	55680898	ENSG00000103546.18	+	protein_coding	KNOWN	SLC6A2	10	15	0.290742
chr16	55704119	55706422	55705270	ENSG00000278928.1	+	TEC	KNOWN	RP11-481F24.3	1	1	0.429027
chr16	55728115	55750111	55739113	ENSG00000260765.2	+	unprocessed_pseudogene	KNOWN	CES1P2	1	11	0.046215
chr16	55760548	55794158	55777353	ENSG00000228695.9	+	transcribed_unprocessed_pseudogene	KNOWN	CES1P1	4	14	0.138477
chr16	55802851	55833337	55818094	ENSG00000198848.12	-	protein_coding	KNOWN	CES1	9	14	0.093254
chr16	55846154	55956031	55901092	ENSG00000159398.15	-	protein_coding	KNOWN	CES5A	9	14	0.038722
chr16	56092987	56191094	56142040	ENSG00000246379.6	-	lincRNA	KNOWN	RP11-461O7.1	4	5	-0.131532
chr16	56108980	56109970	56109475	ENSG00000279523.1	+	TEC	KNOWN	RP11-461O7.2	1	1	0.010796
chr16	56109537	56137000	56123268	ENSG00000260041.5	+	lincRNA	KNOWN	RP11-355E10.1	2	3	-0.107352
chr16	56183726	56186306	56185016	ENSG00000261013.1	-	lincRNA	KNOWN	CTD-2050B12.1	1	2	-0.104597
chr16	56191390	56357444	56274417	ENSG00000087258.13	+	protein_coding	KNOWN	GNAO1	11	9	0.304207
chr16	56192614	56194518	56193566	ENSG00000261439.1	-	antisense	KNOWN	DKFZP434H168	1	1	-0.142473
chr16	56245520	56245623	56245571	ENSG00000265281.1	+	miRNA	KNOWN	MIR3935	1	1	0.492276
chr16	56300616	56302904	56301760	ENSG00000260198.1	+	sense_intronic	KNOWN	RP11-441F2.2	1	2	0.078445
chr16	56306845	56308335	56307590	ENSG00000279764.1	+	TEC	KNOWN	RP11-441F2.4	1	1	0.078445
chr16	56351886	56353524	56352705	ENSG00000272372.1	-	antisense	KNOWN	RP11-441F2.5	1	1	0.699150
chr16	56361452	56425538	56393495	ENSG00000159461.14	-	protein_coding	KNOWN	AMFR	12	14	0.321573
chr16	56409320	56411683	56410501	ENSG00000260621.1	+	antisense	KNOWN	RP11-413H22.2	1	2	0.279601
chr16	56429133	56452199	56440666	ENSG00000167005.13	-	protein_coding	KNOWN	NUDT21	7	7	0.174915
chr16	56451490	56479100	56465295	ENSG00000087263.16	+	protein_coding	KNOWN	OGFOD1	11	13	0.270882
chr16	56465642	56466162	56465902	ENSG00000274031.1	-	antisense	KNOWN	RP11-413H22.3	1	1	0.230968
chr16	56466836	56520283	56493559	ENSG00000125124.11	-	protein_coding	KNOWN	BBS2	21	17	0.308632
chr16	56565049	56568957	56567003	ENSG00000102891.3	+	protein_coding	KNOWN	MT4	1	3	0.426146
chr16	56574401	56574462	56574431	ENSG00000280654.1	+	snRNA	NOVEL	U7	1	1	0.297021
chr16	56589074	56591088	56590081	ENSG00000087250.8	+	protein_coding	KNOWN	MT3	6	4	0.304581
chr16	56608199	56609497	56608848	ENSG00000125148.6	+	protein_coding	KNOWN	MT2A	5	3	0.311002
chr16	56609501	56611375	56610438	ENSG00000260823.1	-	lincRNA	KNOWN	RP11-249C24.10	1	2	0.558728
chr16	56617476	56618818	56618147	ENSG00000260549.1	+	unitary_pseudogene	KNOWN	MT1L	2	3	0.648385
chr16	56625475	56627112	56626293	ENSG00000169715.14	+	protein_coding	KNOWN	MT1E	3	3	0.648385
chr16	56632233	56633986	56633109	ENSG00000205364.3	+	protein_coding	KNOWN	MT1M	2	3	0.545710
chr16	56635739	56637086	56636412	ENSG00000255986.6	+	transcribed_unprocessed_pseudogene	KNOWN	MT1JP	3	3	0.545710
chr16	56638666	56750276	56694471	ENSG00000205362.10	+	protein_coding	KNOWN	MT1A	2	4	0.516296
chr16	56643705	56644786	56644245	ENSG00000205361.8	+	transcribed_unprocessed_pseudogene	KNOWN	MT1DP	2	3	0.545710
chr16	56648248	56649514	56648881	ENSG00000205360.6	+	transcribed_unprocessed_pseudogene	KNOWN	MT1CP	1	3	0.545710
chr16	56648881	56652636	56650758	ENSG00000259923.1	+	processed_transcript	KNOWN	RP11-249C24.11	1	3	0.490322
chr16	56651899	56653204	56652551	ENSG00000169688.10	+	protein_coding	KNOWN	MT1B	2	3	0.466840
chr16	56657694	56660698	56659196	ENSG00000198417.6	+	protein_coding	KNOWN	MT1F	4	3	0.466840
chr16	56666731	56668065	56667398	ENSG00000125144.13	-	protein_coding	KNOWN	MT1G	4	3	0.466840
chr16	56669814	56671129	56670471	ENSG00000205358.3	+	protein_coding	KNOWN	MT1H	2	3	0.707763
chr16	56676132	56677763	56676947	ENSG00000275691.1	+	protein_coding	KNOWN	RP11-249C24.12	1	3	0.747206
chr16	56682424	56684196	56683310	ENSG00000187193.8	+	protein_coding	KNOWN	MT1X	4	3	0.747206
chr16	56682470	56687807	56685138	ENSG00000259827.1	+	processed_transcript	KNOWN	RP11-343H19.2	1	3	0.747206
chr16	56686851	56688052	56687451	ENSG00000261429.2	+	processed_pseudogene	KNOWN	DPPA2P4	1	2	0.747206
chr16	56708772	56729968	56719370	ENSG00000261302.5	-	antisense	KNOWN	RP11-343H19.1	2	3	0.465981
chr16	56730105	56850286	56790195	ENSG00000102900.12	+	protein_coding	KNOWN	NUP93	21	23	0.398201
chr16	56858507	56858616	56858561	ENSG00000207649.2	+	miRNA	KNOWN	MIR138-2	1	1	0.881859
chr16	56864952	56865012	56864982	ENSG00000274182.1	+	miRNA	NOVEL	AC012181.2	1	1	0.881859
chr16	56865207	56915850	56890528	ENSG00000070915.9	+	protein_coding	KNOWN	SLC12A3	6	26	0.937435
chr16	56906534	56906956	56906745	ENSG00000243988.1	+	processed_pseudogene	KNOWN	RPS24P17	1	1	0.867385
chr16	56932048	56944863	56938455	ENSG00000051108.14	+	protein_coding	KNOWN	HERPUD1	19	8	0.817369
chr16	56940278	56941342	56940810	ENSG00000261270.1	+	sense_intronic	KNOWN	RP11-325K4.3	1	2	0.817369
chr16	56941028	56941726	56941377	ENSG00000261114.1	+	sense_intronic	KNOWN	RP11-325K4.2	1	1	0.817369
chr16	56957265	56957361	56957313	ENSG00000263441.1	+	miRNA	NOVEL	AC012181.1	1	1	0.295351
chr16	56961850	56983845	56972847	ENSG00000087237.10	+	protein_coding	KNOWN	CETP	4	16	0.675571
chr16	56989485	57083531	57036508	ENSG00000140853.15	+	protein_coding	KNOWN	NLRC5	29	49	0.876940
chr16	57013071	57014100	57013585	ENSG00000259922.1	-	processed_pseudogene	KNOWN	RP11-322D14.1	1	1	0.729422
chr16	57052505	57058497	57055501	ENSG00000260145.1	-	antisense	KNOWN	RP11-322D14.2	1	2	0.947602
chr16	57091213	57092303	57091758	ENSG00000260148.1	-	antisense	KNOWN	RP11-407G23.1	1	2	0.738128
chr16	57092537	57148367	57120452	ENSG00000140848.16	+	protein_coding	KNOWN	CPNE2	10	17	0.911283
chr16	57140896	57144586	57142741	ENSG00000279019.1	-	TEC	KNOWN	RP11-407G23.2	1	1	1.016704
chr16	57142652	57144936	57143794	ENSG00000279803.1	+	TEC	KNOWN	RP11-407G23.5	1	1	1.016704
chr16	57152466	57186116	57169291	ENSG00000172775.16	-	protein_coding	KNOWN	FAM192A	21	8	0.602155
chr16	57186137	57240475	57213306	ENSG00000159579.13	+	protein_coding	KNOWN	RSPRY1	12	15	0.436068
chr16	57245098	57253635	57249366	ENSG00000102931.7	+	protein_coding	KNOWN	ARL2BP	4	6	0.526882
chr16	57245832	57246396	57246114	ENSG00000276663.1	-	antisense	KNOWN	RP11-407G23.7	1	1	0.401039
chr16	57247350	57248492	57247921	ENSG00000260038.1	+	sense_intronic	KNOWN	RP11-407G23.4	1	2	0.401039
chr16	57248547	57284687	57266617	ENSG00000102934.9	-	protein_coding	KNOWN	PLLP	5	4	0.769113
chr16	57321352	57322117	57321734	ENSG00000260965.1	+	processed_pseudogene	KNOWN	RPL23AP91	1	2	0.779524
chr16	57332379	57332599	57332489	ENSG00000271456.1	-	processed_pseudogene	KNOWN	CTC-661I16.2	1	1	0.386735
chr16	57358772	57366190	57362481	ENSG00000102962.4	+	protein_coding	KNOWN	CCL22	1	3	0.343217
chr16	57372458	57385048	57378753	ENSG00000006210.6	+	protein_coding	KNOWN	CX3CL1	4	3	0.664310
chr16	57404767	57416062	57410414	ENSG00000102970.10	+	protein_coding	KNOWN	CCL17	2	4	0.607350
chr16	57428169	57447528	57437848	ENSG00000005194.14	-	protein_coding	KNOWN	CIAPIN1	15	9	0.691539
chr16	57447425	57461275	57454350	ENSG00000088682.13	+	protein_coding	KNOWN	COQ9	16	9	0.379902
chr16	57461055	57462737	57461896	ENSG00000260345.1	+	processed_transcript	KNOWN	AC009052.12	1	2	0.306649
chr16	57462387	57472010	57467198	ENSG00000102978.12	+	protein_coding	KNOWN	POLR2C	8	9	0.404633
chr16	57471922	57487327	57479624	ENSG00000125170.10	-	protein_coding	KNOWN	DOK4	18	9	0.775518
chr16	57512178	57536599	57524388	ENSG00000135736.5	-	protein_coding	KNOWN	CCDC102A	2	9	0.879145
chr16	57542421	57591681	57567051	ENSG00000159618.15	+	protein_coding	KNOWN	ADGRG5	7	12	0.592565
chr16	57603137	57603697	57603417	ENSG00000260828.1	+	processed_pseudogene	KNOWN	HMGB3P32	1	1	0.084419
chr16	57610652	57665580	57638116	ENSG00000205336.11	+	protein_coding	KNOWN	ADGRG1	77	15	0.760984
chr16	57622034	57631647	57626840	ENSG00000261633.1	-	antisense	KNOWN	RP11-405F3.5	1	4	0.793538
chr16	57668187	57689378	57678782	ENSG00000182885.16	+	protein_coding	KNOWN	ADGRG3	7	12	0.685119
chr16	57681124	57701730	57691427	ENSG00000260467.1	-	antisense	KNOWN	RP11-405F3.4	1	6	0.660974
chr16	57694793	57731805	57713299	ENSG00000159625.14	+	protein_coding	KNOWN	DRC7	10	19	0.538958
chr16	57713782	57714957	57714369	ENSG00000260438.1	+	processed_pseudogene	KNOWN	RP11-405F3.2	1	2	0.435294
chr16	57735730	57757250	57746490	ENSG00000140854.12	+	protein_coding	KNOWN	KATNB1	10	20	0.818042
chr16	57758217	57863053	57810635	ENSG00000140859.15	-	protein_coding	KNOWN	KIFC3	35	21	0.770243
chr16	57759358	57760024	57759691	ENSG00000276166.1	+	antisense	KNOWN	CTD-2600O9.2	1	1	0.863367
chr16	57772289	57772352	57772320	ENSG00000274816.1	-	miRNA	KNOWN	MIR6772	1	1	0.772923
chr16	57798186	57816946	57807566	ENSG00000187185.4	+	lincRNA	KNOWN	CTD-2600O9.1	3	4	0.812324
chr16	57830536	57830642	57830589	ENSG00000206833.1	-	snRNA	KNOWN	RNU6-20P	1	1	0.759416
chr16	57874384	57874530	57874457	ENSG00000265209.1	-	miRNA	NOVEL	AC010543.1	1	1	0.494090
chr16	57882340	57971116	57926728	ENSG00000070729.13	-	protein_coding	KNOWN	CNGB1	9	33	0.503544
chr16	57976435	57988116	57982275	ENSG00000159648.11	+	protein_coding	KNOWN	TEPP	4	8	0.613529
chr16	57994668	58000453	57997560	ENSG00000166188.2	-	protein_coding	KNOWN	ZNF319	2	2	0.858502
chr16	57999546	58021618	58010582	ENSG00000103005.11	+	protein_coding	KNOWN	USB1	16	7	0.713833
chr16	58025566	58046901	58036233	ENSG00000102996.4	+	protein_coding	KNOWN	MMP15	2	10	0.659567
chr16	58083068	58083168	58083118	ENSG00000207173.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.372620
chr16	58092053	58092947	58092500	ENSG00000261151.1	-	processed_pseudogene	KNOWN	RP11-332G1.1	1	1	0.516641
chr16	58113588	58129450	58121519	ENSG00000070761.7	-	protein_coding	KNOWN	CFAP20	7	6	0.253273
chr16	58116885	58119353	58118119	ENSG00000260545.1	+	antisense	KNOWN	CTB-134F13.1	1	2	0.253273
chr16	58129529	58159133	58144331	ENSG00000260927.1	+	antisense	KNOWN	RP11-459F6.3	1	4	0.299823
chr16	58157907	58197920	58177913	ENSG00000070770.8	-	protein_coding	KNOWN	CSNK2A2	6	12	0.171780
chr16	58197112	58217805	58207458	ENSG00000260867.1	+	antisense	KNOWN	RP11-459F6.1	1	2	0.356039
chr16	58199568	58199836	58199702	ENSG00000240863.3	-	misc_RNA	KNOWN	RN7SL645P	1	1	0.324283
chr16	58231157	58283836	58257496	ENSG00000103021.9	+	protein_coding	KNOWN	CCDC113	6	9	0.145003
chr16	58279997	58295047	58287522	ENSG00000103023.11	-	protein_coding	KNOWN	PRSS54	6	7	0.245865
chr16	58295080	58406144	58350612	ENSG00000181938.13	+	protein_coding	KNOWN	GINS3	10	5	-0.027887
chr16	58378052	58378148	58378100	ENSG00000212379.1	-	snRNA	KNOWN	RNU6-269P	1	1	-0.102824
chr16	58382989	58383798	58383393	ENSG00000261078.1	-	antisense	KNOWN	RP11-481J2.1	1	2	-0.102824
chr16	58384442	58384542	58384492	ENSG00000252271.1	-	snRNA	KNOWN	RNU6-1110P	1	1	-0.102824
chr16	58392153	58392807	58392480	ENSG00000276131.1	-	antisense	KNOWN	RP11-481J2.3	1	1	0.053722
chr16	58421326	58462470	58441898	ENSG00000260186.5	+	lincRNA	KNOWN	RP11-481J2.2	3	4	0.254385
chr16	58462846	58513628	58488237	ENSG00000103034.14	+	protein_coding	KNOWN	NDRG4	55	18	0.475835
chr16	58496908	58497014	58496961	ENSG00000200556.1	+	snRNA	KNOWN	RNU6-103P	1	1	0.676954
chr16	58515479	58521181	58518330	ENSG00000103037.11	+	protein_coding	KNOWN	SETD6	13	9	0.922637
chr16	58519951	58629886	58574918	ENSG00000125107.16	-	protein_coding	KNOWN	CNOT1	24	50	0.368392
chr16	58522970	58523842	58523406	ENSG00000276259.1	+	antisense	KNOWN	RP11-481J2.4	1	1	0.922637
chr16	58548499	58548633	58548566	ENSG00000207493.1	-	snoRNA	KNOWN	SNORA46	1	1	0.451662
chr16	58554337	58554935	58554636	ENSG00000279816.1	+	protein_coding	KNOWN	AC010287.1	1	1	0.028266
chr16	58559796	58559929	58559862	ENSG00000206952.3	-	snoRNA	KNOWN	SNORA76A	1	1	0.028266
chr16	58559796	58559931	58559863	ENSG00000281910.1	-	snoRNA	KNOWN	SNORA76A	1	1	0.028266
chr16	58597589	58597945	58597767	ENSG00000260865.1	-	transcribed_processed_pseudogene	KNOWN	CTA-331F8.1	1	1	0.604640
chr16	58665109	58685104	58675106	ENSG00000103042.8	-	protein_coding	KNOWN	SLC38A7	16	12	0.574987
chr16	58705799	58706297	58706048	ENSG00000279889.1	-	TEC	KNOWN	RP11-451N19.3	1	1	0.573398
chr16	58707131	58734357	58720744	ENSG00000125166.12	-	protein_coding	KNOWN	GOT2	7	10	0.288799
chr16	58733912	59108974	58921443	ENSG00000245768.6	+	lincRNA	KNOWN	RP11-410D17.2	3	4	-0.178168
chr16	58744251	58744357	58744304	ENSG00000200424.1	-	snRNA	KNOWN	RNU6-1155P	1	1	0.380668
chr16	58770524	58770820	58770672	ENSG00000244003.3	+	misc_RNA	KNOWN	RN7SL143P	1	1	-0.070859
chr16	58776540	58777563	58777051	ENSG00000260451.1	+	processed_pseudogene	KNOWN	GEMIN8P2	1	2	-0.070859
chr16	58825891	58826368	58826129	ENSG00000242423.2	+	processed_pseudogene	KNOWN	RPL12P36	1	1	-0.080993
chr16	58847807	58880213	58864010	ENSG00000261638.1	-	lincRNA	KNOWN	RP11-700H13.1	2	3	-0.118182
chr16	59004213	59004494	59004353	ENSG00000275808.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.074469
chr16	59088837	59089091	59088964	ENSG00000244043.1	+	processed_pseudogene	KNOWN	RPS27P27	1	1	-0.167767
chr16	59166951	59167152	59167051	ENSG00000261144.1	-	processed_pseudogene	KNOWN	RP11-102D18.1	1	1	-0.053686
chr16	59540126	59540266	59540196	ENSG00000200062.1	+	snRNA	KNOWN	RNU4-58P	1	1	-0.109642
chr16	59655602	59656336	59655969	ENSG00000270222.1	+	processed_pseudogene	KNOWN	DUXAP11	1	2	-0.061088
chr16	59709993	59755026	59732509	ENSG00000260240.4	-	transcribed_processed_pseudogene	KNOWN	APOOP5	3	5	-0.443209
chr16	59855353	60053973	59954663	ENSG00000261807.2	+	lincRNA	KNOWN	RP11-430C1.1	1	4	-0.381976
chr16	60024578	60025141	60024859	ENSG00000261278.1	-	processed_pseudogene	KNOWN	RP11-430C1.2	1	2	-0.103139
chr16	60357214	60357474	60357344	ENSG00000261590.1	+	processed_pseudogene	KNOWN	RP11-457D20.1	1	1	-0.246810
chr16	60358455	60359480	60358967	ENSG00000278499.2	-	protein_coding	KNOWN	RP11-457D20.2	1	1	-0.246810
chr16	60359842	60442245	60401043	ENSG00000261436.5	+	lincRNA	KNOWN	RP11-354I13.2	2	5	-0.428286
chr16	60429648	60429733	60429690	ENSG00000265167.1	-	miRNA	NOVEL	AC009081.1	1	1	-0.339724
chr16	60486819	60523250	60505034	ENSG00000261310.1	-	lincRNA	KNOWN	RP11-354I13.1	1	3	-0.624511
chr16	60654235	60656649	60655442	ENSG00000259844.2	-	processed_pseudogene	KNOWN	GNPATP	1	2	-0.485066
chr16	60769979	60770083	60770031	ENSG00000265127.1	+	miRNA	NOVEL	AC009080.1	1	1	-0.422376
chr16	60925733	60928541	60927137	ENSG00000261178.2	-	unprocessed_pseudogene	KNOWN	RP11-90K18.1	1	3	-0.605445
chr16	61055399	61055964	61055681	ENSG00000224631.4	-	transcribed_processed_pseudogene	KNOWN	RP11-51O6.1	2	1	-0.535199
chr16	61647242	62037035	61842138	ENSG00000150394.13	-	protein_coding	KNOWN	CDH8	14	13	-0.371550
chr16	61691756	61693750	61692753	ENSG00000260600.1	-	sense_intronic	KNOWN	RP11-109D24.1	1	1	-0.479424
chr16	61743154	61743476	61743315	ENSG00000201289.1	-	misc_RNA	KNOWN	RN7SKP76	1	1	-0.785752
chr16	61918321	61940697	61929509	ENSG00000260115.1	+	antisense	KNOWN	CTC-420A11.2	1	4	-0.256054
chr16	62187540	62187646	62187593	ENSG00000207441.1	-	snRNA	KNOWN	RNU6-21P	1	1	-0.615557
chr16	62342420	62342557	62342488	ENSG00000280261.1	+	TEC	KNOWN	RP11-75D3.1	1	1	-0.453442
chr16	62357371	62357746	62357558	ENSG00000237901.1	+	processed_pseudogene	KNOWN	AC009161.1	1	1	-0.535282
chr16	62596372	62598449	62597410	ENSG00000231589.1	+	lincRNA	KNOWN	AC009110.1	1	2	-0.484509
chr16	62720824	62720914	62720869	ENSG00000222299.2	-	miRNA	NOVEL	AC092116.1	1	1	-0.260310
chr16	62808222	62808706	62808464	ENSG00000260332.1	-	processed_pseudogene	KNOWN	RP11-50O21.1	1	1	-0.675347
chr16	62825961	62826048	62826004	ENSG00000223123.1	-	miRNA	NOVEL	AC010546.1	1	1	-0.578303
chr16	63056786	63129654	63093220	ENSG00000261502.3	-	processed_transcript	KNOWN	RP11-96H17.1	2	5	-0.656851
chr16	63066526	63066990	63066758	ENSG00000269986.1	-	sense_intronic	KNOWN	RP11-96H17.3	1	1	-0.756005
chr16	63180610	63181071	63180840	ENSG00000261199.1	-	processed_pseudogene	KNOWN	UBE2FP2	1	1	-0.468309
chr16	63314264	63618046	63466155	ENSG00000260658.5	-	lincRNA	KNOWN	RP11-368L12.1	3	4	-0.527508
chr16	63350763	63351149	63350956	ENSG00000241808.1	-	processed_pseudogene	KNOWN	RPS15AP34	1	1	-0.413536
chr16	63368844	63369456	63369150	ENSG00000261743.1	+	lincRNA	KNOWN	RP11-2K6.2	1	2	-0.413536
chr16	63397707	63397946	63397826	ENSG00000279225.1	+	TEC	KNOWN	RP11-2K6.1	1	1	-0.398147
chr16	63703483	63703665	63703574	ENSG00000259864.1	+	processed_pseudogene	KNOWN	RP11-370P15.1	1	1	-0.172771
chr16	63730277	63754757	63742517	ENSG00000261014.1	+	lincRNA	KNOWN	RP11-370P15.2	1	4	-0.581582
chr16	63935778	63936906	63936342	ENSG00000261653.1	+	lincRNA	KNOWN	RP11-21L1.1	1	1	-0.003165
chr16	64155169	64156574	64155871	ENSG00000260715.1	+	lincRNA	KNOWN	RP11-744D14.2	1	1	0.268870
chr16	64242608	64343909	64293258	ENSG00000261028.1	-	lincRNA	KNOWN	AC012322.1	1	5	-0.119825
chr16	64260570	64261239	64260904	ENSG00000260668.1	-	processed_pseudogene	KNOWN	RP11-744D14.1	1	2	0.046904
chr16	64364781	64600247	64482514	ENSG00000259846.1	+	lincRNA	KNOWN	RP11-467L24.1	1	5	-0.179495
chr16	64735925	64736804	64736364	ENSG00000259859.1	+	lincRNA	KNOWN	RP11-439I14.2	1	2	-0.489295
chr16	64736788	64737280	64737034	ENSG00000260187.1	+	transcribed_processed_pseudogene	KNOWN	RP11-439I14.1	1	1	-0.489295
chr16	64738323	64738564	64738443	ENSG00000260068.1	+	processed_pseudogene	KNOWN	RP11-439I14.3	1	1	-0.489295
chr16	64943753	65126112	65034932	ENSG00000140937.13	-	protein_coding	KNOWN	CDH11	19	14	0.122615
chr16	64981123	64983227	64982175	ENSG00000278893.1	-	TEC	KNOWN	RP11-229O3.1	1	1	0.017138
chr16	65141756	65176713	65159234	ENSG00000259847.1	-	lincRNA	KNOWN	RP11-95H3.1	2	4	0.039909
chr16	65190973	65234914	65212943	ENSG00000260834.1	-	lincRNA	KNOWN	RP11-256I9.2	2	4	0.059302
chr16	65233056	65432820	65332938	ENSG00000260364.1	+	lincRNA	KNOWN	RP11-256I9.3	1	5	0.044526
chr16	65284499	65576300	65430399	ENSG00000261742.5	-	lincRNA	KNOWN	LINC00922	3	10	0.079007
chr16	65580668	65646947	65613807	ENSG00000261818.1	+	lincRNA	KNOWN	RP11-351A20.1	1	3	-0.013908
chr16	65601101	65601698	65601399	ENSG00000260004.1	-	lincRNA	KNOWN	RP11-351A20.2	1	2	-0.056331
chr16	65861112	65863784	65862448	ENSG00000260695.1	-	lincRNA	KNOWN	RP11-513N24.1	1	1	0.091992
chr16	65938189	65938453	65938321	ENSG00000261234.1	-	processed_pseudogene	KNOWN	RP11-356O24.1	1	1	-0.364073
chr16	66301809	66301940	66301874	ENSG00000201999.1	+	rRNA	KNOWN	RNA5SP428	1	1	0.141868
chr16	66366622	66404786	66385704	ENSG00000179776.17	+	protein_coding	KNOWN	CDH5	8	12	0.584861
chr16	66408524	66412135	66410329	ENSG00000246898.1	+	lincRNA	KNOWN	LINC00920	1	2	0.495739
chr16	66427297	66493529	66460413	ENSG00000166546.13	+	protein_coding	KNOWN	BEAN1	11	6	0.658119
chr16	66450998	66451351	66451174	ENSG00000260146.1	-	processed_pseudogene	KNOWN	CTD-2258A20.3	1	1	0.501715
chr16	66469796	66481230	66475513	ENSG00000261656.5	-	antisense	KNOWN	BEAN1-AS1	3	5	0.532016
chr16	66469812	66517312	66493562	ENSG00000260851.6	-	protein_coding	KNOWN	RP11-403P17.5	2	6	0.719505
chr16	66508003	66552544	66530273	ENSG00000166548.15	-	protein_coding	KNOWN	TK2	21	11	0.842915
chr16	66509437	66510048	66509742	ENSG00000260755.1	+	lincRNA	KNOWN	RP11-403P17.3	1	2	0.835227
chr16	66549280	66551189	66550234	ENSG00000261519.3	+	lincRNA	KNOWN	RP11-403P17.4	1	1	0.688095
chr16	66550457	66550567	66550512	ENSG00000275745.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.640428
chr16	66552563	66566251	66559407	ENSG00000217555.12	+	protein_coding	KNOWN	CKLF	8	4	0.640428
chr16	66552587	66579135	66565861	ENSG00000254788.7	+	protein_coding	KNOWN	CKLF-CMTM1	6	4	0.576764
chr16	66565620	66566001	66565810	ENSG00000277978.1	-	antisense	KNOWN	RP11-403P17.6	1	1	0.640428
chr16	66566393	66579137	66572765	ENSG00000089505.17	+	protein_coding	KNOWN	CMTM1	20	5	0.507775
chr16	66579448	66588275	66583861	ENSG00000140932.9	+	protein_coding	KNOWN	CMTM2	4	4	0.455428
chr16	66579983	66580716	66580349	ENSG00000260650.1	-	antisense	KNOWN	RP11-403P17.2	1	2	0.455428
chr16	66603874	66613892	66608883	ENSG00000140931.19	+	protein_coding	KNOWN	CMTM3	15	6	0.533988
chr16	66614750	66696707	66655728	ENSG00000183723.12	-	protein_coding	KNOWN	CMTM4	5	5	0.746571
chr16	66720893	66751798	66736345	ENSG00000135720.12	-	protein_coding	KNOWN	DYNC1LI2	15	13	0.442901
chr16	66720897	66731785	66726341	ENSG00000260465.1	+	antisense	KNOWN	RP11-63M22.2	1	2	0.527576
chr16	66738263	66739326	66738794	ENSG00000260558.1	+	lincRNA	KNOWN	RP11-63M22.1	1	2	0.377035
chr16	66751752	66754740	66753246	ENSG00000246777.1	+	lincRNA	KNOWN	RP11-61A14.4	1	2	0.597031
chr16	66754976	66801620	66778298	ENSG00000249961.9	-	protein_coding	KNOWN	CCDC79	6	19	0.492683
chr16	66802875	66873256	66838065	ENSG00000159593.14	-	protein_coding	KNOWN	NAE1	22	21	0.695709
chr16	66841433	66853448	66847440	ENSG00000258122.1	-	antisense	KNOWN	RP11-61A14.1	1	2	0.602467
chr16	66844379	66854153	66849266	ENSG00000168748.13	+	protein_coding	KNOWN	CA7	3	7	0.664773
chr16	66878589	66895754	66887171	ENSG00000172840.6	+	protein_coding	KNOWN	PDP2	9	5	0.913821
chr16	66908122	66918984	66913553	ENSG00000166589.12	-	protein_coding	KNOWN	CDH16	9	18	1.044078
chr16	66921679	66925644	66923661	ENSG00000166592.11	-	protein_coding	KNOWN	RRAD	5	5	1.023820
chr16	66932055	66934423	66933239	ENSG00000166595.11	-	protein_coding	KNOWN	FAM96B	6	6	1.266490
chr16	66934444	66945096	66939770	ENSG00000172831.11	+	protein_coding	KNOWN	CES2	12	12	1.266490
chr16	66942712	66963256	66952984	ENSG00000265408.1	+	processed_transcript	KNOWN	RP11-361L15.4	1	4	1.064013
chr16	66944660	66945096	66944878	ENSG00000280416.1	-	TEC	KNOWN	RP11-361L15.3	1	1	1.266490
chr16	66961237	66975148	66968192	ENSG00000172828.12	+	protein_coding	KNOWN	CES3	8	13	0.934159
chr16	66988589	67009758	66999173	ENSG00000172824.14	+	protein_coding	KNOWN	CES4A	11	12	0.706540
chr16	67006672	67009481	67008076	ENSG00000280334.1	-	TEC	KNOWN	RP11-361L15.5	1	1	0.692551
chr16	67019519	67019817	67019668	ENSG00000265918.2	+	misc_RNA	KNOWN	RN7SL543P	1	1	1.091992
chr16	67019727	67019811	67019769	ENSG00000281589.1	+	miRNA	NOVEL	AC009084.1	1	1	1.091992
chr16	67029116	67101058	67065087	ENSG00000067955.13	+	protein_coding	KNOWN	CBFB	9	6	0.654175
chr16	67109958	67148539	67129248	ENSG00000125149.11	+	protein_coding	KNOWN	C16orf70	11	17	0.967181
chr16	67148105	67151214	67149659	ENSG00000237172.3	-	protein_coding	KNOWN	B3GNT9	1	2	1.053577
chr16	67154180	67160298	67157239	ENSG00000102871.15	-	protein_coding	KNOWN	TRADD	5	5	1.107589
chr16	67159931	67164570	67162250	ENSG00000135722.8	+	protein_coding	KNOWN	FBXL8	9	4	1.107589
chr16	67163385	67165815	67164600	ENSG00000265690.7	+	protein_coding	KNOWN	RP11-5A19.5	4	5	1.107589
chr16	67164681	67169945	67167313	ENSG00000102878.16	+	protein_coding	KNOWN	HSF4	25	13	1.107589
chr16	67170154	67175735	67172944	ENSG00000140939.14	+	protein_coding	KNOWN	NOL3	13	6	1.390007
chr16	67175602	67184040	67179821	ENSG00000196123.12	-	protein_coding	KNOWN	KIAA0895L	12	8	1.390007
chr16	67184366	67190204	67187285	ENSG00000179044.15	-	protein_coding	KNOWN	EXOC3L1	7	14	1.387752
chr16	67192169	67198918	67195543	ENSG00000205250.8	+	protein_coding	KNOWN	E2F4	13	10	1.325789
chr16	67199111	67204029	67201570	ENSG00000102890.14	+	protein_coding	KNOWN	ELMO3	5	20	1.325789
chr16	67202308	67202418	67202363	ENSG00000207948.2	-	miRNA	KNOWN	MIR328	1	1	1.325789
chr16	67205175	67206849	67206012	ENSG00000280163.1	-	TEC	KNOWN	CTC-277H1.6	1	1	1.325789
chr16	67207139	67227048	67217093	ENSG00000125122.14	-	protein_coding	KNOWN	LRRC29	9	7	1.418452
chr16	67227103	67229278	67228190	ENSG00000168701.18	+	protein_coding	KNOWN	TMEM208	12	6	1.433996
chr16	67229387	67247658	67238522	ENSG00000135723.13	-	protein_coding	KNOWN	FHOD1	10	22	0.973919
chr16	67237683	67272190	67254936	ENSG00000135740.16	+	protein_coding	KNOWN	SLC9A5	9	16	1.242524
chr16	67261108	67263784	67262446	ENSG00000262691.1	+	processed_transcript	KNOWN	CTC-277H1.7	1	1	1.437589
chr16	67277510	67289499	67283504	ENSG00000196155.12	+	protein_coding	KNOWN	PLEKHG4	15	22	1.061434
chr16	67289428	67326763	67308095	ENSG00000168676.10	-	protein_coding	KNOWN	KCTD19	11	16	0.902332
chr16	67321658	67321987	67321822	ENSG00000201201.1	-	misc_RNA	KNOWN	RN7SKP118	1	1	0.794400
chr16	67326798	67385203	67356000	ENSG00000159708.17	+	protein_coding	KNOWN	LRRC36	18	14	0.392131
chr16	67389809	67393535	67391672	ENSG00000159713.10	-	protein_coding	KNOWN	TPPP3	5	5	0.940437
chr16	67390691	67390850	67390770	ENSG00000239194.1	-	snRNA	KNOWN	RNU1-123P	1	1	0.967185
chr16	67394419	67416833	67405626	ENSG00000159714.10	-	protein_coding	KNOWN	ZDHHC1	6	11	0.923724
chr16	67430652	67437553	67434102	ENSG00000176387.6	+	protein_coding	KNOWN	HSD11B2	4	5	1.006971
chr16	67430667	67431464	67431065	ENSG00000261320.1	-	lincRNA	KNOWN	RP11-297D21.2	1	2	1.006971
chr16	67438014	67481237	67459625	ENSG00000159720.11	-	protein_coding	KNOWN	ATP6V0D1	18	9	1.028003
chr16	67481314	67505063	67493188	ENSG00000270049.2	+	antisense	KNOWN	RP11-297D21.4	4	4	0.862644
chr16	67482571	67483813	67483192	ENSG00000159723.4	-	protein_coding	KNOWN	AGRP	1	4	0.910879
chr16	67517862	67528675	67523268	ENSG00000276075.1	-	antisense	KNOWN	CTD-2012K14.8	2	2	1.015540
chr16	67518418	67546788	67532603	ENSG00000039523.17	+	protein_coding	KNOWN	FAM65A	23	23	1.276993
chr16	67538557	67540106	67539331	ENSG00000261396.1	-	antisense	KNOWN	CTD-2012K14.2	1	3	1.457342
chr16	67542123	67542963	67542543	ENSG00000259945.1	-	antisense	KNOWN	CTD-2012K14.3	1	2	1.457342
chr16	67542304	67542572	67542438	ENSG00000260894.1	-	antisense	KNOWN	CTD-2012K14.4	1	2	1.457342
chr16	67549214	67563958	67556586	ENSG00000261386.2	-	lincRNA	KNOWN	CTD-2012K14.6	2	2	1.191926
chr16	67550815	67552935	67551875	ENSG00000280214.1	-	TEC	KNOWN	CTD-2012K14.5	1	1	1.177000
chr16	67561411	67562309	67561860	ENSG00000259804.1	-	antisense	KNOWN	CTD-2012K14.7	1	1	1.177000
chr16	67562407	67639183	67600795	ENSG00000102974.14	+	protein_coding	KNOWN	CTCF	3	12	0.804850
chr16	67614381	67616146	67615263	ENSG00000237718.2	-	antisense	KNOWN	AC009095.4	1	2	0.613628
chr16	67644919	67657569	67651244	ENSG00000159753.13	+	protein_coding	KNOWN	RLTPR	12	38	1.038450
chr16	67657512	67660815	67659163	ENSG00000102977.13	-	protein_coding	KNOWN	ACD	15	12	1.256528
chr16	67660946	67662778	67661862	ENSG00000102981.9	+	protein_coding	KNOWN	PARD6A	4	3	1.256528
chr16	67662945	67667265	67665105	ENSG00000124074.11	-	protein_coding	KNOWN	ENKD1	7	7	1.256528
chr16	67666816	67668758	67667787	ENSG00000159761.14	+	protein_coding	KNOWN	C16orf86	6	4	1.256528
chr16	67674531	67719421	67696976	ENSG00000141098.12	-	protein_coding	KNOWN	GFOD2	7	3	0.874665
chr16	67723066	67806652	67764859	ENSG00000141084.10	-	protein_coding	KNOWN	RANBP10	9	17	0.891104
chr16	67738588	67739922	67739255	ENSG00000270165.1	-	sense_intronic	KNOWN	RP11-167P11.2	1	2	0.985707
chr16	67806765	67832148	67819456	ENSG00000102904.14	+	protein_coding	KNOWN	TSNAXIP1	16	16	1.032046
chr16	67828157	67847811	67837984	ENSG00000102901.12	-	protein_coding	KNOWN	CENPT	35	16	1.087895
chr16	67842082	67844195	67843138	ENSG00000168286.2	+	protein_coding	KNOWN	THAP11	1	1	1.096279
chr16	67846732	67872567	67859649	ENSG00000102898.11	+	protein_coding	KNOWN	NUTF2	8	6	1.027206
chr16	67855955	67856111	67856033	ENSG00000262141.1	-	processed_pseudogene	KNOWN	CTC-479C5.11	1	1	1.003936
chr16	67873023	67884503	67878763	ENSG00000038358.14	+	protein_coding	KNOWN	EDC4	14	29	1.120561
chr16	67877657	67877740	67877698	ENSG00000221526.1	+	miRNA	NOVEL	AC040162.1	1	1	1.120561
chr16	67882461	67886367	67884414	ENSG00000263126.1	+	lincRNA	KNOWN	CTC-479C5.10	1	1	1.120561
chr16	67884805	67888855	67886830	ENSG00000188038.7	+	protein_coding	KNOWN	NRN1L	3	3	1.120561
chr16	67893272	67929678	67911475	ENSG00000159792.9	+	protein_coding	KNOWN	PSKH1	3	3	1.306141
chr16	67927640	67932414	67930027	ENSG00000141086.17	-	protein_coding	KNOWN	CTRL	8	7	1.193108
chr16	67929614	67936017	67932815	ENSG00000261884.2	-	protein_coding	KNOWN	CTC-479C5.12	2	6	1.201947
chr16	67934502	67937087	67935794	ENSG00000205220.11	-	protein_coding	KNOWN	PSMB10	5	8	1.203171
chr16	67939750	67944131	67941940	ENSG00000213398.7	-	protein_coding	KNOWN	LCAT	9	6	1.203171
chr16	67943474	67969601	67956537	ENSG00000124067.16	-	protein_coding	KNOWN	SLC12A4	19	24	1.334886
chr16	67975663	67980829	67978246	ENSG00000141096.4	-	protein_coding	KNOWN	DPEP3	2	10	1.167149
chr16	67987394	68000586	67993990	ENSG00000167261.13	-	protein_coding	KNOWN	DPEP2	9	12	0.908079
chr16	67987746	68079320	68033533	ENSG00000167264.17	+	protein_coding	KNOWN	DUS2	16	17	0.733018
chr16	68002432	68004952	68003692	ENSG00000262962.1	-	unprocessed_pseudogene	KNOWN	KARSP3	1	4	0.844333
chr16	68013436	68015911	68014673	ENSG00000263201.1	-	protein_coding	KNOWN	CTC-479C5.6	1	2	0.668687
chr16	68017710	68017817	68017763	ENSG00000202336.1	-	snRNA	KNOWN	RNU6-359P	1	1	0.668687
chr16	68021274	68023442	68022358	ENSG00000182810.6	-	protein_coding	KNOWN	DDX28	1	1	0.668687
chr16	68055779	68055884	68055831	ENSG00000221789.1	-	miRNA	NOVEL	AC130462.1	1	1	0.584016
chr16	68077340	68122271	68099805	ENSG00000261864.1	+	processed_transcript	KNOWN	RP11-67A1.2	1	3	0.623115
chr16	68084751	68229259	68157005	ENSG00000072736.18	+	protein_coding	KNOWN	NFATC3	22	11	0.518196
chr16	68089449	68089543	68089496	ENSG00000201850.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.986330
chr16	68189287	68189421	68189354	ENSG00000212445.1	+	snoRNA	NOVEL	SNORA48	1	1	0.683438
chr16	68199795	68200981	68200388	ENSG00000262514.1	+	sense_intronic	KNOWN	RP11-96D1.9	1	1	0.704646
chr16	68199841	68200981	68200411	ENSG00000279621.1	-	TEC	KNOWN	RP11-67A1.4	1	1	0.704646
chr16	68209442	68209778	68209610	ENSG00000240435.2	+	processed_pseudogene	KNOWN	RPS12P27	1	1	0.704646
chr16	68212401	68221671	68217036	ENSG00000260891.1	-	antisense	KNOWN	RP11-96D1.5	1	2	0.465450
chr16	68224713	68227734	68226223	ENSG00000263276.1	+	sense_overlapping	KNOWN	RP11-96D1.10	1	1	0.465450
chr16	68225969	68229145	68227557	ENSG00000262160.1	-	antisense	KNOWN	RP11-96D1.11	1	1	0.465450
chr16	68229111	68238102	68233606	ENSG00000103067.11	-	protein_coding	KNOWN	ESRP2	12	15	0.848392
chr16	68233426	68233499	68233462	ENSG00000276151.1	-	miRNA	KNOWN	MIR6773	1	1	0.890358
chr16	68236845	68237667	68237256	ENSG00000261469.1	-	sense_intronic	KNOWN	RP11-96D1.6	1	2	0.890358
chr16	68245304	68261062	68253183	ENSG00000103066.12	+	protein_coding	KNOWN	PLA2G15	12	7	0.828981
chr16	68256162	68260443	68258302	ENSG00000260441.5	-	antisense	KNOWN	RP11-96D1.7	2	3	0.802933
chr16	68264516	68301823	68283169	ENSG00000103064.13	+	protein_coding	KNOWN	SLC7A6	16	12	0.903220
chr16	68284223	68284318	68284270	ENSG00000252026.1	-	snRNA	KNOWN	RNU6-1262P	1	1	1.020733
chr16	68284503	68310951	68297727	ENSG00000103061.11	-	protein_coding	KNOWN	SLC7A6OS	6	6	0.800378
chr16	68290087	68292790	68291438	ENSG00000279649.1	-	TEC	KNOWN	RP11-96D1.8	1	1	0.750955
chr16	68310974	68358563	68334768	ENSG00000132600.16	+	protein_coding	KNOWN	PRMT7	27	19	0.730167
chr16	68316801	68319036	68317918	ENSG00000259797.1	+	sense_intronic	KNOWN	RP11-96D1.3	1	2	0.566530
chr16	68329387	68329529	68329458	ENSG00000222177.1	-	snRNA	KNOWN	RNU4-30P	1	1	0.566530
chr16	68358325	68448688	68403506	ENSG00000103056.11	-	protein_coding	KNOWN	SMPD3	12	9	0.855590
chr16	68367325	68370262	68368793	ENSG00000279693.1	-	TEC	KNOWN	RP11-71L14.3	1	1	1.016433
chr16	68450283	68452318	68451300	ENSG00000274698.1	+	lincRNA	KNOWN	RP11-71L14.4	1	1	0.652292
chr16	68474553	68474664	68474608	ENSG00000199263.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.598952
chr16	68477237	68477570	68477403	ENSG00000241334.2	-	processed_pseudogene	KNOWN	RPL35AP33	1	1	0.598952
chr16	68530090	68576072	68553081	ENSG00000184939.15	+	protein_coding	KNOWN	ZFP90	19	5	0.701821
chr16	68535515	68535658	68535586	ENSG00000201164.1	+	snRNA	KNOWN	RNU4-36P	1	1	1.048599
chr16	68573782	68589512	68581647	ENSG00000260084.1	-	antisense	KNOWN	RP11-615I2.1	1	2	0.091992
chr16	68591382	68594424	68592903	ENSG00000275383.1	+	lincRNA	KNOWN	RP11-615I2.6	1	1	0.440478
chr16	68630223	68630354	68630288	ENSG00000252040.1	-	snoRNA	NOVEL	snoU109	1	1	0.522626
chr16	68630851	68630968	68630909	ENSG00000252640.1	-	snoRNA	NOVEL	snoU109	1	1	0.522626
chr16	68636189	68722616	68679402	ENSG00000062038.13	+	protein_coding	KNOWN	CDH3	10	16	0.674065
chr16	68644248	68646168	68645208	ENSG00000260577.2	-	antisense	KNOWN	RP11-615I2.2	1	2	0.522626
chr16	68651056	68651948	68651502	ENSG00000260860.2	-	processed_pseudogene	KNOWN	RP11-615I2.3	1	1	0.862821
chr16	68686399	68686670	68686534	ENSG00000261395.3	+	transcribed_processed_pseudogene	KNOWN	HSPE1P5	1	1	0.604877
chr16	68737225	68835548	68786386	ENSG00000039068.18	+	protein_coding	KNOWN	CDH1	14	17	0.540634
chr16	68742480	68742588	68742534	ENSG00000200558.1	+	rRNA	KNOWN	RNA5SP429	1	1	0.568430
chr16	68742495	68742551	68742523	ENSG00000281454.1	+	miRNA	NOVEL	AC099314.1	1	1	0.568430
chr16	68814330	68823526	68818928	ENSG00000260798.1	-	antisense	KNOWN	RP11-354M1.2	1	3	0.388609
chr16	68822587	68823070	68822828	ENSG00000260459.2	+	processed_pseudogene	KNOWN	FTLP14	1	1	0.388609
chr16	68843604	69085180	68964392	ENSG00000103047.7	+	protein_coding	KNOWN	TANGO6	10	18	0.405495
chr16	68885576	68885677	68885626	ENSG00000199979.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.376360
chr16	68926894	68926957	68926925	ENSG00000275504.1	-	snRNA	NOVEL	U7	1	1	0.272073
chr16	68927547	68948261	68937904	ENSG00000260999.1	-	lincRNA	KNOWN	RP11-521L9.1	1	2	0.532379
chr16	68933820	68937725	68935772	ENSG00000266801.1	+	sense_intronic	KNOWN	RP11-521L9.2	1	2	0.567330
chr16	69007052	69007155	69007103	ENSG00000202497.1	-	snRNA	KNOWN	RNU6-898P	1	1	0.283687
chr16	69025860	69026643	69026251	ENSG00000271129.1	-	processed_pseudogene	KNOWN	RP11-123C5.5	1	2	0.156122
chr16	69033675	69036042	69034858	ENSG00000244378.1	+	transcribed_processed_pseudogene	KNOWN	RPS2P45	2	1	0.492775
chr16	69105564	69118719	69112141	ENSG00000103044.10	+	protein_coding	KNOWN	HAS3	5	4	0.790070
chr16	69118010	69132584	69125297	ENSG00000168802.12	-	protein_coding	KNOWN	CHTF8	11	5	0.887246
chr16	69131291	69231130	69181210	ENSG00000141076.17	+	protein_coding	KNOWN	CIRH1A	16	17	0.557321
chr16	69175671	69175777	69175724	ENSG00000207083.1	-	snRNA	KNOWN	RNU6-22P	1	1	0.870434
chr16	69187129	69309052	69248090	ENSG00000168807.16	+	protein_coding	KNOWN	SNTB2	6	7	0.405410
chr16	69191123	69191223	69191173	ENSG00000200164.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.488651
chr16	69240549	69241929	69241239	ENSG00000265113.1	+	sense_intronic	KNOWN	RP11-70O5.2	1	2	0.157415
chr16	69299682	69322700	69311191	ENSG00000260914.3	+	protein_coding	KNOWN	RP11-343C2.11	1	10	0.497954
chr16	69311356	69326939	69319147	ENSG00000132612.15	+	protein_coding	KNOWN	VPS4A	4	11	0.570645
chr16	69320140	69339667	69329903	ENSG00000213380.13	-	protein_coding	KNOWN	COG8	6	6	0.731531
chr16	69328621	69330595	69329608	ENSG00000258429.1	-	protein_coding	KNOWN	PDF	1	2	0.668756
chr16	69328644	69334871	69331757	ENSG00000272617.1	-	protein_coding	KNOWN	RP11-343C2.12	1	2	0.824886
chr16	69335091	69356306	69345698	ENSG00000260371.1	-	protein_coding	KNOWN	RP11-343C2.9	1	3	0.869135
chr16	69335276	69351730	69343503	ENSG00000259900.5	-	protein_coding	KNOWN	RP11-343C2.7	2	5	0.886231
chr16	69339430	69343111	69341270	ENSG00000132603.13	+	protein_coding	KNOWN	NIP7	8	5	0.895595
chr16	69343248	69351809	69347528	ENSG00000157315.4	-	protein_coding	KNOWN	TMED6	2	4	0.876777
chr16	69355561	69408571	69382066	ENSG00000132604.10	-	protein_coding	KNOWN	TERF2	12	10	0.676769
chr16	69424525	69466266	69445395	ENSG00000103018.16	+	protein_coding	KNOWN	CYB5B	7	5	0.249219
chr16	69443240	69444290	69443765	ENSG00000261527.1	-	processed_pseudogene	KNOWN	RP11-343C2.10	1	2	0.145859
chr16	69463844	69466264	69465054	ENSG00000260108.1	+	3prime_overlapping_ncrna	KNOWN	RP11-140H17.1	1	1	0.263758
chr16	69565094	69704666	69634880	ENSG00000102908.20	+	protein_coding	KNOWN	NFAT5	12	16	0.244165
chr16	69565808	69565868	69565838	ENSG00000223109.1	-	miRNA	KNOWN	MIR1538	1	1	0.282675
chr16	69632141	69632571	69632356	ENSG00000274093.1	+	sense_intronic	KNOWN	RP11-140H17.2	1	1	-0.256618
chr16	69703065	69704652	69703858	ENSG00000260772.1	+	3prime_overlapping_ncrna	KNOWN	RP11-311C24.1	1	1	0.225743
chr16	69706996	69726951	69716973	ENSG00000181019.12	-	protein_coding	KNOWN	NQO1	7	6	0.366169
chr16	69709874	69710583	69710228	ENSG00000261602.1	+	antisense	KNOWN	CTD-2033A16.1	1	2	0.361901
chr16	69727013	69742563	69734788	ENSG00000262136.1	+	antisense	KNOWN	CTD-2033A16.3	1	2	0.592540
chr16	69741867	69754940	69748403	ENSG00000141101.12	-	protein_coding	KNOWN	NOB1	6	9	0.677440
chr16	69756536	69757937	69757236	ENSG00000260290.2	-	processed_pseudogene	KNOWN	CTD-2033A16.2	1	1	0.738355
chr16	69762306	69941741	69852023	ENSG00000198373.12	+	protein_coding	KNOWN	WWP2	20	24	0.639168
chr16	69785994	69786113	69786053	ENSG00000252443.1	-	snoRNA	NOVEL	SNORA62	1	1	0.586499
chr16	69933073	69933182	69933127	ENSG00000208017.2	+	miRNA	KNOWN	MIR140	1	1	0.810053
chr16	69950705	69964452	69957578	ENSG00000157322.16	+	protein_coding	KNOWN	CLEC18A	11	17	0.990495
chr16	69975238	69975344	69975291	ENSG00000277003.1	+	unprocessed_pseudogene	KNOWN	RP11-419C5.3	1	1	0.731720
chr16	69976297	70065948	70021122	ENSG00000196696.12	-	processed_transcript	KNOWN	PDXDC2P	6	26	0.568042
chr16	69976388	69996188	69986288	ENSG00000226232.8	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-419C5.2	3	7	0.696462
chr16	70010751	70065945	70038348	ENSG00000255185.5	-	transcribed_unprocessed_pseudogene	KNOWN	PDXDC2P	6	15	0.508801
chr16	70030346	70030422	70030384	ENSG00000239118.1	+	miRNA	KNOWN	MIR1972-2	1	1	0.458120
chr16	70052395	70052769	70052582	ENSG00000279533.1	-	protein_coding	KNOWN	AC009022.1	1	1	0.485423
chr16	70079129	70079624	70079376	ENSG00000241183.1	-	processed_pseudogene	KNOWN	RP11-106J23.1	1	1	0.760651
chr16	70113626	70162537	70138081	ENSG00000090857.13	+	protein_coding	KNOWN	PDPR	11	19	0.667817
chr16	70156340	70173448	70164894	ENSG00000247228.2	-	antisense	KNOWN	RP11-296I10.3	2	5	0.782113
chr16	70173322	70187361	70180341	ENSG00000157335.19	+	protein_coding	KNOWN	CLEC18C	13	18	0.788376
chr16	70202354	70202459	70202406	ENSG00000261145.1	+	processed_pseudogene	KNOWN	RP11-296I10.5	1	1	0.835731
chr16	70205400	70205780	70205590	ENSG00000280006.1	-	protein_coding	KNOWN	AC009060.2	1	1	0.835731
chr16	70216895	70217003	70216949	ENSG00000276989.1	-	miRNA	NOVEL	AC009060.1	1	1	0.734670
chr16	70219574	70245616	70232595	ENSG00000261556.8	-	transcribed_unprocessed_pseudogene	KNOWN	SMG1P7	4	17	0.710903
chr16	70224358	70224738	70224548	ENSG00000280252.1	+	protein_coding	KNOWN	AC009060.3	1	1	0.734670
chr16	70246778	70251930	70249354	ENSG00000223496.2	-	protein_coding	KNOWN	EXOSC6	1	1	0.792430
chr16	70252295	70289543	70270919	ENSG00000090861.15	-	protein_coding	KNOWN	AARS	7	21	0.933189
chr16	70276069	70276352	70276210	ENSG00000265648.2	+	misc_RNA	KNOWN	RN7SL279P	1	1	0.913535
chr16	70289663	70335283	70312473	ENSG00000157349.16	+	protein_coding	KNOWN	DDX19B	16	12	0.856836
chr16	70299194	70372582	70335888	ENSG00000260537.2	+	protein_coding	KNOWN	RP11-529K1.3	3	12	0.799375
chr16	70315640	70346747	70331193	ENSG00000261777.5	-	processed_transcript	KNOWN	RP11-529K1.2	2	5	0.675951
chr16	70346829	70373383	70360106	ENSG00000168872.16	+	protein_coding	KNOWN	DDX19A	15	12	0.860784
chr16	70375978	70439237	70407607	ENSG00000157350.12	-	protein_coding	KNOWN	ST3GAL2	6	7	0.850955
chr16	70379457	70399502	70389479	ENSG00000260111.1	+	antisense	KNOWN	RP11-529K1.4	1	2	0.857908
chr16	70444674	70444912	70444793	ENSG00000240043.1	-	processed_pseudogene	KNOWN	RPS27P26	1	1	0.895768
chr16	70445293	70445399	70445346	ENSG00000200153.1	-	snRNA	KNOWN	RNU6-23P	1	1	0.895768
chr16	70454421	70480274	70467347	ENSG00000157353.16	+	protein_coding	KNOWN	FUK	13	24	0.807106
chr16	70480568	70523565	70502066	ENSG00000103051.18	-	protein_coding	KNOWN	COG4	14	20	0.846936
chr16	70523788	70577670	70550729	ENSG00000189091.12	+	protein_coding	KNOWN	SF3B3	15	26	0.635287
chr16	70529509	70529588	70529548	ENSG00000221514.1	+	snoRNA	KNOWN	SNORD111B	1	1	0.682879
chr16	70538005	70538098	70538051	ENSG00000221066.1	+	snoRNA	KNOWN	SNORD111	1	1	0.741607
chr16	70579895	70660682	70620288	ENSG00000157368.10	+	protein_coding	KNOWN	IL34	6	7	0.794534
chr16	70661204	70686066	70673635	ENSG00000132613.14	-	protein_coding	KNOWN	MTSS1L	4	15	1.242463
chr16	70661667	70665836	70663751	ENSG00000279569.1	+	TEC	KNOWN	RP11-394B2.1	1	1	1.032159
chr16	70687439	70801161	70744300	ENSG00000103043.14	-	protein_coding	KNOWN	VAC14	12	19	1.010681
chr16	70713987	70716890	70715438	ENSG00000279412.1	+	TEC	KNOWN	RP11-394B2.5	1	1	0.957215
chr16	70747057	70747926	70747491	ENSG00000260156.1	+	antisense	KNOWN	RP11-394B2.6	1	2	0.905029
chr16	70755098	70773251	70764174	ENSG00000214353.7	+	antisense	KNOWN	VAC14-AS1	2	6	0.862949
chr16	70768356	70768785	70768570	ENSG00000279815.1	+	TEC	KNOWN	RP11-394B2.7	1	1	0.835427
chr16	70768967	70770221	70769594	ENSG00000279122.1	-	TEC	KNOWN	RP11-394B2.3	1	1	0.862625
chr16	70778433	70779145	70778789	ENSG00000279123.1	+	TEC	KNOWN	RP11-424M24.3	1	1	0.989058
chr16	70802083	70802840	70802461	ENSG00000262890.1	-	lincRNA	KNOWN	RP11-424M24.5	1	1	0.633886
chr16	70807378	71230722	71019050	ENSG00000157423.17	-	protein_coding	KNOWN	HYDIN	23	86	-0.011690
chr16	70852698	70852814	70852756	ENSG00000221725.1	+	snRNA	KNOWN	RNU6ATAC25P	1	1	0.243156
chr16	70873184	70873313	70873248	ENSG00000223316.1	-	miRNA	NOVEL	AC027281.1	1	1	-0.113327
chr16	71080866	71093667	71087266	ENSG00000259833.5	+	antisense	KNOWN	RP11-23E19.1	2	4	-0.232094
chr16	71113352	71114000	71113676	ENSG00000259798.1	+	antisense	KNOWN	RP11-23E19.2	1	2	-0.224192
chr16	71281389	71289715	71285552	ENSG00000180917.16	-	protein_coding	KNOWN	CMTR2	9	4	-0.193680
chr16	71301583	71302869	71302226	ENSG00000261260.1	+	lincRNA	KNOWN	CTD-2520I13.1	1	2	-0.161457
chr16	71331189	71331299	71331244	ENSG00000221237.1	+	miRNA	NOVEL	AC106736.1	1	1	-0.277582
chr16	71358713	71390438	71374575	ENSG00000172137.18	+	protein_coding	KNOWN	CALB2	5	11	0.318404
chr16	71410440	71426464	71418452	ENSG00000261348.1	-	lincRNA	KNOWN	RP11-510M2.1	1	3	0.120561
chr16	71420483	71421518	71421000	ENSG00000262120.1	+	unprocessed_pseudogene	KNOWN	RP11-510M2.7	1	2	0.120561
chr16	71430262	71432282	71431272	ENSG00000260734.3	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-510M2.4	2	5	0.141139
chr16	71443055	71443856	71443455	ENSG00000262008.1	-	unprocessed_pseudogene	KNOWN	RP11-510M2.8	1	2	0.141139
chr16	71447597	71463095	71455346	ENSG00000167377.17	-	protein_coding	KNOWN	ZNF23	11	7	0.413928
chr16	71447600	71489311	71468455	ENSG00000261611.5	-	protein_coding	KNOWN	AC010547.9	1	12	0.319032
chr16	71462278	71465941	71464109	ENSG00000247324.2	+	antisense	KNOWN	RP11-510M2.2	2	3	0.463961
chr16	71464555	71565089	71514822	ENSG00000157429.15	-	protein_coding	KNOWN	ZNF19	15	6	0.232509
chr16	71513863	71517849	71515856	ENSG00000260520.1	+	antisense	KNOWN	RP11-510M2.6	1	3	0.049681
chr16	71525233	71538746	71531989	ENSG00000140835.9	+	protein_coding	KNOWN	CHST4	3	3	0.192151
chr16	71539834	71541825	71540829	ENSG00000260015.1	-	sense_intronic	KNOWN	RP11-510M2.5	1	2	0.269779
chr16	71563430	71563528	71563479	ENSG00000252339.1	-	snRNA	KNOWN	RNU6-1061P	1	1	0.158718
chr16	71565660	71577130	71571395	ENSG00000198650.10	-	protein_coding	KNOWN	TAT	4	12	0.071694
chr16	71565789	71578187	71571988	ENSG00000260886.1	+	antisense	KNOWN	TAT-AS1	1	4	0.066274
chr16	71623708	71626816	71625262	ENSG00000260593.1	-	antisense	KNOWN	RP11-432I5.2	1	2	0.511706
chr16	71626161	71642114	71634137	ENSG00000140832.9	+	protein_coding	KNOWN	MARVELD3	6	3	0.530051
chr16	71637835	71724701	71681268	ENSG00000040199.18	-	protein_coding	KNOWN	PHLPP2	7	19	0.249492
chr16	71655027	71664212	71659619	ENSG00000260185.1	+	antisense	KNOWN	RP11-432I5.6	1	2	0.268541
chr16	71666091	71666197	71666144	ENSG00000199301.1	+	snRNA	KNOWN	RNU6-208P	1	1	0.268541
chr16	71698567	71698701	71698634	ENSG00000263666.1	-	snoRNA	KNOWN	SNORA70D	1	1	0.091992
chr16	71723180	71724230	71723705	ENSG00000261513.1	+	antisense	KNOWN	RP11-432I5.8	1	2	0.350453
chr16	71726975	71727992	71727483	ENSG00000260612.1	+	lincRNA	KNOWN	RP11-432I5.4	1	1	0.350453
chr16	71729000	71809201	71769100	ENSG00000166747.12	-	protein_coding	KNOWN	AP1G1	22	26	0.397184
chr16	71758402	71758487	71758444	ENSG00000223224.1	-	snoRNA	KNOWN	SNORD71	1	1	0.260115
chr16	71777603	71777834	71777718	ENSG00000283057.1	-	processed_pseudogene	KNOWN	RP11-417N10.5	1	1	0.517852
chr16	71833787	71835932	71834859	ENSG00000262140.1	+	unprocessed_pseudogene	KNOWN	RP11-417N10.3	1	3	0.576071
chr16	71845991	71885268	71865629	ENSG00000224470.7	+	protein_coding	KNOWN	ATXN1L	3	4	0.361255
chr16	71845996	71931199	71888597	ENSG00000182149.20	+	protein_coding	KNOWN	IST1	27	12	0.421839
chr16	71859680	71860676	71860178	ENSG00000279592.1	+	TEC	KNOWN	RP11-417N10.4	1	1	0.412424
chr16	71859680	71895336	71877508	ENSG00000102984.14	-	protein_coding	KNOWN	ZNF821	21	9	0.341572
chr16	71881553	71882273	71881913	ENSG00000261765.1	-	sense_intronic	KNOWN	RP11-498D10.3	1	2	0.237843
chr16	71929538	71999978	71964758	ENSG00000277481.1	-	protein_coding	KNOWN	PKD1L3	1	30	0.270193
chr16	71978441	71978541	71978491	ENSG00000264079.2	+	miRNA	NOVEL	AC009127.1	1	1	0.070405
chr16	71991151	71991305	71991228	ENSG00000242176.1	-	processed_pseudogene	KNOWN	RPL39P31	1	1	0.211044
chr16	72004239	72004803	72004521	ENSG00000263311.1	-	unprocessed_pseudogene	KNOWN	RP11-498D10.8	1	2	0.211044
chr16	72005037	72006543	72005790	ENSG00000263232.2	-	processed_pseudogene	KNOWN	ATP5A1P3	1	1	0.211044
chr16	72008588	72027664	72018126	ENSG00000102967.11	+	protein_coding	KNOWN	DHODH	9	9	0.260612
chr16	72044289	72094431	72069360	ENSG00000140830.8	-	protein_coding	KNOWN	TXNL4B	6	5	0.187878
chr16	72054592	72061055	72057823	ENSG00000257017.8	+	protein_coding	KNOWN	HP	18	8	0.021219
chr16	72063224	72077246	72070235	ENSG00000261701.6	+	protein_coding	KNOWN	HPR	4	6	0.166728
chr16	72084857	72087443	72086150	ENSG00000260252.1	+	antisense	KNOWN	RP11-384M15.3	1	2	0.302759
chr16	72093562	72112912	72103237	ENSG00000140829.11	+	protein_coding	KNOWN	DHX38	14	27	0.169393
chr16	72112157	72176878	72144517	ENSG00000118557.15	-	protein_coding	KNOWN	PMFBP1	11	22	0.289672
chr16	72224565	72225144	72224854	ENSG00000261673.1	-	lincRNA	KNOWN	RP11-328J14.1	1	2	0.150586
chr16	72278268	72278568	72278418	ENSG00000261774.1	+	processed_pseudogene	KNOWN	RP11-328J14.2	1	1	0.275058
chr16	72283301	72665009	72474155	ENSG00000261008.6	-	lincRNA	KNOWN	LINC01572	6	14	-0.009090
chr16	72425948	72533892	72479920	ENSG00000260664.2	+	lincRNA	KNOWN	AC004158.3	2	2	-0.075777
chr16	72496967	72497341	72497154	ENSG00000280264.1	-	protein_coding	KNOWN	AC004158.1	1	1	-0.092433
chr16	72579542	72579637	72579589	ENSG00000221286.1	-	miRNA	NOVEL	AC092289.1	1	1	-0.006412
chr16	72607780	72607888	72607834	ENSG00000273581.1	+	miRNA	NOVEL	AC092289.2	1	1	0.166954
chr16	72665170	72791624	72728397	ENSG00000259768.5	+	antisense	KNOWN	RP5-991G20.1	1	5	-0.038026
chr16	72673503	72673564	72673533	ENSG00000238731.1	+	snRNA	KNOWN	RNU7-90P	1	1	-0.031240
chr16	72728616	72729894	72729255	ENSG00000261764.1	+	transcribed_processed_pseudogene	KNOWN	KRT18P18	1	1	0.206812
chr16	72772673	72773272	72772972	ENSG00000279206.1	+	lincRNA	KNOWN	RP5-991G20.6	1	1	-0.247032
chr16	72782885	73059698	72921291	ENSG00000140836.14	-	protein_coding	KNOWN	ZFHX3	4	10	0.436721
chr16	72787693	72787773	72787733	ENSG00000265573.1	-	miRNA	NOVEL	AC004943.1	1	1	-0.247032
chr16	72805998	72809872	72807935	ENSG00000259209.3	+	antisense	KNOWN	RP5-991G20.2	3	2	0.595566
chr16	72821933	72821992	72821962	ENSG00000251868.1	-	snRNA	KNOWN	RNU7-71P	1	1	0.193139
chr16	72973374	72973832	72973603	ENSG00000279757.1	-	TEC	KNOWN	CTD-2326C4.1	1	1	0.320810
chr16	72984857	72984954	72984905	ENSG00000221799.1	+	miRNA	NOVEL	AC132068.1	1	1	0.320810
chr16	73005601	73006141	73005871	ENSG00000280092.1	-	TEC	KNOWN	AC002044.3	1	1	0.606565
chr16	73014319	73014476	73014397	ENSG00000272330.1	-	sense_intronic	KNOWN	AC002044.4	1	1	0.507029
chr16	73015047	73016016	73015531	ENSG00000279591.1	-	TEC	KNOWN	AC002044.1	1	1	0.507029
chr16	73060245	73060759	73060502	ENSG00000272250.1	+	lincRNA	KNOWN	RP11-346C20.4	1	1	0.460917
chr16	73060470	73062316	73061393	ENSG00000271009.2	+	lincRNA	KNOWN	RP11-346C20.3	1	1	0.460917
chr16	73092349	73093774	73093061	ENSG00000260880.2	+	lincRNA	KNOWN	HCCAT5	1	3	0.540750
chr16	73126637	73144447	73135542	ENSG00000197445.2	-	lincRNA	KNOWN	C16orf47	1	4	0.238619
chr16	73232055	73233970	73233012	ENSG00000261227.2	+	lincRNA	KNOWN	AC140912.1	2	2	-0.043892
chr16	73293866	73294296	73294081	ENSG00000279120.1	-	TEC	KNOWN	RP11-140I24.2	1	1	0.268541
chr16	73386805	73421393	73404099	ENSG00000258779.6	+	lincRNA	KNOWN	LINC01568	4	3	0.187021
chr16	73483317	73487744	73485530	ENSG00000258582.1	+	lincRNA	KNOWN	RP11-44L9.1	1	3	-0.032099
chr16	73499309	73499763	73499536	ENSG00000260687.1	+	lincRNA	KNOWN	RP11-44L9.2	1	2	0.091992
chr16	73511176	73511654	73511415	ENSG00000259971.1	+	lincRNA	KNOWN	RP11-44L9.3	1	1	-0.224981
chr16	73543941	73558522	73551231	ENSG00000260848.1	+	lincRNA	KNOWN	CTD-2009A10.1	1	4	-0.195739
chr16	73812621	73816054	73814337	ENSG00000259817.1	+	lincRNA	KNOWN	RP11-53L24.1	1	4	0.083480
chr16	74053365	74053965	74053665	ENSG00000279420.1	+	TEC	KNOWN	RP11-42H13.1	1	1	-0.307278
chr16	74054151	74296762	74175456	ENSG00000261404.5	-	lincRNA	KNOWN	AC009120.4	3	4	-0.185840
chr16	74150520	74151299	74150909	ENSG00000279100.1	+	TEC	KNOWN	AC009120.9	1	1	-0.293792
chr16	74220929	74221427	74221178	ENSG00000260471.1	+	processed_pseudogene	KNOWN	AC009120.8	1	1	-0.294477
chr16	74282415	74287519	74284967	ENSG00000261248.1	+	lincRNA	KNOWN	AC009120.10	1	2	0.075690
chr16	74289593	74291052	74290322	ENSG00000275236.1	-	lincRNA	KNOWN	AC009120.11	1	1	0.293804
chr16	74296775	74306288	74301531	ENSG00000103035.10	+	protein_coding	KNOWN	PSMD7	6	8	0.377901
chr16	74305127	74335346	74320236	ENSG00000259972.2	-	processed_transcript	KNOWN	AC009120.6	5	3	0.412381
chr16	74312609	74313390	74312999	ENSG00000239763.2	-	processed_pseudogene	KNOWN	AC009120.3	1	2	0.392651
chr16	74313337	74315634	74314485	ENSG00000260884.1	+	lincRNA	KNOWN	AC009120.5	1	2	0.392651
chr16	74332402	74368240	74350321	ENSG00000214331.8	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-252A24.2	5	15	0.317699
chr16	74367462	74369826	74368644	ENSG00000261079.1	+	lincRNA	KNOWN	RP11-252A24.3	1	1	0.124856
chr16	74377878	74392080	74384979	ENSG00000196436.8	+	protein_coding	KNOWN	NPIPB15	2	7	0.648763
chr16	74393076	74393183	74393129	ENSG00000276822.1	-	unprocessed_pseudogene	KNOWN	RP11-252A24.8	1	1	0.446275
chr16	74408270	74421953	74415111	ENSG00000140839.11	-	protein_coding	KNOWN	CLEC18B	6	13	0.702290
chr16	74422120	74435254	74428687	ENSG00000261170.1	+	antisense	KNOWN	RP11-252A24.5	2	3	0.669511
chr16	74447427	74607144	74527285	ENSG00000090863.11	-	protein_coding	KNOWN	GLG1	14	27	0.353588
chr16	74456541	74456611	74456576	ENSG00000251794.1	+	snRNA	KNOWN	RNU6-237P	1	1	0.490023
chr16	74463888	74463988	74463938	ENSG00000207525.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.490023
chr16	74552251	74552746	74552498	ENSG00000240861.1	+	processed_pseudogene	KNOWN	RP11-572F4.1	1	1	0.151581
chr16	74612596	74613221	74612908	ENSG00000270945.1	-	processed_pseudogene	KNOWN	HSPE1P7	1	2	0.463175
chr16	74621394	74666881	74644137	ENSG00000168411.13	-	protein_coding	KNOWN	RFWD3	12	14	0.473832
chr16	74667506	74668706	74668106	ENSG00000262904.1	+	processed_pseudogene	KNOWN	TMPOP2	1	1	0.272073
chr16	74671855	74700960	74686407	ENSG00000168404.12	-	protein_coding	KNOWN	MLKL	8	11	0.342246
chr16	74712955	74774831	74743893	ENSG00000103089.8	-	protein_coding	KNOWN	FA2H	5	7	0.488634
chr16	74842587	74843883	74843235	ENSG00000261458.1	+	unprocessed_pseudogene	KNOWN	RP11-787D11.1	1	3	-0.099628
chr16	74871367	75000173	74935770	ENSG00000103091.14	-	protein_coding	KNOWN	WDR59	23	26	0.480963
chr16	74999030	75110994	75055012	ENSG00000186187.11	+	protein_coding	KNOWN	ZNRF1	11	6	0.445713
chr16	75108601	75110712	75109656	ENSG00000247033.1	-	antisense	KNOWN	RP11-252E2.1	1	2	0.480572
chr16	75111860	75116771	75114315	ENSG00000166816.13	-	protein_coding	KNOWN	LDHD	4	11	0.682061
chr16	75119558	75144200	75131879	ENSG00000261058.1	+	lincRNA	KNOWN	RP11-252E2.2	1	5	0.497029
chr16	75148492	75172236	75160364	ENSG00000184517.11	+	protein_coding	KNOWN	ZFP1	9	5	0.434503
chr16	75192465	75193247	75192856	ENSG00000213318.4	-	processed_pseudogene	KNOWN	RP11-331F4.1	1	1	0.360188
chr16	75204096	75207185	75205640	ENSG00000168928.12	-	protein_coding	KNOWN	CTRB2	6	7	0.360188
chr16	75219000	75224924	75221962	ENSG00000168925.10	+	protein_coding	KNOWN	CTRB1	2	7	0.513343
chr16	75226074	75228197	75227135	ENSG00000240338.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-331F4.4	4	4	0.513343
chr16	75228187	75268053	75248120	ENSG00000050820.16	-	protein_coding	KNOWN	BCAR1	22	8	1.234980
chr16	75245994	75250077	75248035	ENSG00000280152.1	-	TEC	KNOWN	RP11-331F4.5	1	1	1.287949
chr16	75286712	75286800	75286756	ENSG00000252101.2	-	snRNA	KNOWN	RNU6-758P	1	1	0.746138
chr16	75293698	75433485	75363591	ENSG00000153774.8	-	protein_coding	KNOWN	CFDP1	11	7	0.364416
chr16	75321890	75325048	75323469	ENSG00000259999.1	-	sense_intronic	KNOWN	RP11-252K23.1	1	2	0.476333
chr16	75379818	75381260	75380539	ENSG00000261783.1	-	sense_intronic	KNOWN	RP11-252K23.2	1	2	0.222494
chr16	75409332	75409466	75409399	ENSG00000252122.1	-	snoRNA	NOVEL	SNORA76	1	1	0.558013
chr16	75412684	75464706	75438695	ENSG00000261717.5	-	protein_coding	KNOWN	RP11-77K12.1	3	4	0.195218
chr16	75433836	75436392	75435114	ENSG00000274220.1	+	lincRNA	KNOWN	RP11-77K12.9	1	1	0.173522
chr16	75443054	75465497	75454275	ENSG00000166822.12	-	protein_coding	KNOWN	TMEM170A	7	4	0.256710
chr16	75458252	75460017	75459134	ENSG00000261476.1	-	sense_intronic	KNOWN	RP11-77K12.3	1	2	0.293988
chr16	75472052	75495384	75483718	ENSG00000183196.8	-	protein_coding	KNOWN	CHST6	2	4	0.449752
chr16	75475896	75495407	75485651	ENSG00000203472.3	+	antisense	KNOWN	RP11-77K12.4	1	2	0.451954
chr16	75497948	75498289	75498118	ENSG00000273971.1	-	lincRNA	KNOWN	RP11-77K12.10	1	1	0.486271
chr16	75499788	75516280	75508034	ENSG00000262583.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-77K12.5	2	5	0.484621
chr16	75528532	75545428	75536980	ENSG00000260092.1	-	protein_coding	KNOWN	RP11-77K12.7	1	5	0.454174
chr16	75528535	75535247	75531891	ENSG00000135702.14	-	protein_coding	KNOWN	CHST5	2	4	0.458166
chr16	75536744	75556286	75546515	ENSG00000205084.10	-	protein_coding	KNOWN	TMEM231	10	7	0.307569
chr16	75541399	75608445	75574922	ENSG00000259992.1	-	processed_transcript	KNOWN	RP11-77K12.8	1	8	0.157863
chr16	75556392	75557059	75556725	ENSG00000276408.1	+	lincRNA	KNOWN	RP11-490B18.5	1	1	0.004044
chr16	75566351	75577881	75572116	ENSG00000034713.7	+	protein_coding	KNOWN	GABARAPL2	5	4	0.111139
chr16	75572185	75572685	75572435	ENSG00000276523.1	-	antisense	KNOWN	RP11-490B18.6	1	1	0.160705
chr16	75596981	75623300	75610140	ENSG00000065457.10	-	protein_coding	KNOWN	ADAT1	10	11	0.298795
chr16	75627474	75648643	75638058	ENSG00000065427.14	-	protein_coding	KNOWN	KARS	12	15	0.420593
chr16	75647786	75761872	75704829	ENSG00000166848.5	+	protein_coding	KNOWN	TERF2IP	3	3	-0.071489
chr16	75694434	75700152	75697293	ENSG00000282757.2	-	unprocessed_pseudogene	KNOWN	DUXB	1	4	-0.120312
chr16	75698531	75698816	75698673	ENSG00000240199.3	-	misc_RNA	KNOWN	RN7SL520P	1	1	-0.120312
chr16	75709056	75709815	75709435	ENSG00000261424.1	-	processed_pseudogene	KNOWN	ATP5F1P7	1	1	-0.120312
chr16	75838630	75860867	75849748	ENSG00000261313.1	-	lincRNA	KNOWN	RP11-2C15.1	3	4	-0.340340
chr16	75861048	75861157	75861102	ENSG00000199299.1	-	rRNA	KNOWN	RNA5SP430	1	1	-0.323046
chr16	76107283	76147806	76127544	ENSG00000260223.1	-	lincRNA	KNOWN	RP11-293N14.1	2	4	-0.361730
chr16	76228385	76262365	76245375	ENSG00000260983.1	-	lincRNA	KNOWN	RP11-150D5.2	1	3	-0.071755
chr16	76235055	76235623	76235339	ENSG00000244485.1	-	processed_pseudogene	KNOWN	RPL18P13	1	1	0.137506
chr16	76277278	76559238	76418258	ENSG00000152910.18	+	protein_coding	KNOWN	CNTNAP4	9	24	-0.418601
chr16	76287630	76287739	76287684	ENSG00000252814.1	+	misc_RNA	KNOWN	RN7SKP233	1	1	-0.550246
chr16	76380026	76380159	76380092	ENSG00000264645.1	+	miRNA	NOVEL	AC010528.1	1	1	-0.299330
chr16	76469508	76469595	76469551	ENSG00000252022.1	-	snoRNA	NOVEL	SNORD33	1	1	-0.244604
chr16	76553417	76819624	76686520	ENSG00000261833.2	+	protein_coding	KNOWN	RP11-58C22.1	1	4	-0.462696
chr16	76582556	76583098	76582827	ENSG00000273659.1	+	lincRNA	KNOWN	RP11-58C22.2	1	1	-0.289643
chr16	76634998	76658478	76646738	ENSG00000250514.1	+	lincRNA	KNOWN	RP11-96P7.1	1	4	-0.324221
chr16	76736342	76928169	76832255	ENSG00000259995.1	+	lincRNA	KNOWN	CTD-2336H13.2	1	3	-0.377990
chr16	76868936	76869019	76868977	ENSG00000266426.1	+	miRNA	KNOWN	MIR4719	1	1	-0.386372
chr16	76878274	76878936	76878605	ENSG00000260797.1	-	processed_pseudogene	KNOWN	CTD-2336H13.1	1	1	-0.201739
chr16	77104260	77105297	77104778	ENSG00000279856.1	+	TEC	KNOWN	CTD-2300H10.2	1	1	-0.247318
chr16	77190835	77202405	77196620	ENSG00000103111.14	+	protein_coding	KNOWN	MON1B	10	6	0.033777
chr16	77199397	77213215	77206306	ENSG00000205078.5	+	protein_coding	KNOWN	SYCE1L	3	11	0.061848
chr16	77201474	77249957	77225715	ENSG00000261063.1	-	antisense	KNOWN	RP11-538I12.2	1	2	0.041805
chr16	77220406	77221258	77220832	ENSG00000226348.1	+	unitary_pseudogene	KNOWN	VN2R10P	1	1	0.154388
chr16	77234877	77290934	77262905	ENSG00000260922.1	+	antisense	KNOWN	RP11-538I12.3	1	3	-0.018462
chr16	77247813	77435114	77341463	ENSG00000140873.15	-	protein_coding	KNOWN	ADAMTS18	9	23	-0.112224
chr16	77433382	77444336	77438859	ENSG00000260701.1	+	antisense	KNOWN	RP11-449J10.1	1	2	-0.232011
chr16	77436012	77436100	77436056	ENSG00000216131.2	-	miRNA	NOVEL	AC025284.1	1	1	-0.232011
chr16	77590806	77610681	77600743	ENSG00000261154.1	+	lincRNA	KNOWN	RP11-571O6.1	1	3	-0.072313
chr16	77657174	77660570	77658872	ENSG00000278862.1	+	TEC	KNOWN	RP11-571O6.2	1	1	0.025266
chr16	77722492	77742260	77732376	ENSG00000140876.11	+	protein_coding	KNOWN	NUDT7	7	5	0.009600
chr16	77741468	77743000	77742234	ENSG00000261707.1	-	antisense	KNOWN	RP11-264M12.2	1	2	0.163693
chr16	77788530	77980107	77884318	ENSG00000171724.2	+	protein_coding	KNOWN	VAT1L	2	9	-0.108311
chr16	77800023	77801714	77800868	ENSG00000278926.1	+	TEC	KNOWN	RP11-264M12.4	1	1	-0.125037
chr16	77892422	77892915	77892668	ENSG00000261330.1	+	processed_pseudogene	KNOWN	RP11-281J9.1	1	1	-0.066156
chr16	78014683	78059454	78037068	ENSG00000261540.1	-	antisense	KNOWN	RP11-281J9.2	1	2	-0.084136
chr16	78022515	78066761	78044638	ENSG00000166509.10	+	protein_coding	KNOWN	CLEC3A	3	3	-0.042994
chr16	78048483	78049897	78049190	ENSG00000260731.1	-	processed_pseudogene	KNOWN	KRT8P22	1	1	0.046188
chr16	78055824	78056927	78056375	ENSG00000261776.1	-	processed_pseudogene	KNOWN	RP11-358L22.2	1	1	-0.043986
chr16	78099413	79212667	78656040	ENSG00000186153.16	+	protein_coding	KNOWN	WWOX	18	10	-0.145370
chr16	78123243	78124332	78123787	ENSG00000276007.1	+	sense_intronic	KNOWN	RP11-358L22.3	1	1	0.190958
chr16	78166717	78168514	78167615	ENSG00000279991.1	-	TEC	KNOWN	RP11-190D6.1	1	1	-0.368426
chr16	78237362	78241218	78239290	ENSG00000260969.1	-	antisense	KNOWN	RP11-190D6.2	1	3	-0.593900
chr16	78355529	78355834	78355681	ENSG00000260014.1	+	processed_pseudogene	KNOWN	LSM3P5	1	1	-0.232533
chr16	78495926	78506568	78501247	ENSG00000260733.1	-	antisense	KNOWN	RP11-264L1.4	1	3	-0.210571
chr16	78525189	78526535	78525862	ENSG00000279887.1	-	TEC	KNOWN	RP11-264L1.1	1	1	0.038553
chr16	78534374	78535648	78535011	ENSG00000261837.1	+	sense_intronic	KNOWN	RP11-264L1.3	1	2	-0.169548
chr16	78550739	78553296	78552017	ENSG00000279129.1	-	TEC	KNOWN	RP11-264L1.2	2	1	-0.095635
chr16	78825281	78826006	78825643	ENSG00000243101.1	+	processed_pseudogene	KNOWN	RPS3P7	1	1	-0.534033
chr16	78872739	78873505	78873122	ENSG00000280115.1	+	TEC	KNOWN	RP11-133M8.3	1	1	-0.271756
chr16	78890231	78892302	78891266	ENSG00000280190.1	+	TEC	KNOWN	RP11-319G9.1	1	1	-0.398334
chr16	78895361	78899644	78897502	ENSG00000260816.2	+	sense_intronic	KNOWN	RP11-319G9.3	1	1	-0.398334
chr16	78981722	78981843	78981782	ENSG00000279732.1	-	TEC	KNOWN	RP11-319G9.4	1	1	0.083724
chr16	78994345	79004730	78999537	ENSG00000261537.1	+	sense_intronic	KNOWN	RP11-319G9.5	1	3	0.000493
chr16	79016136	79017429	79016782	ENSG00000280274.1	+	TEC	KNOWN	RP11-556H2.1	1	1	0.083379
chr16	79077376	79078234	79077805	ENSG00000260694.1	-	antisense	KNOWN	RP11-556H2.4	1	2	0.074714
chr16	79090050	79101754	79095902	ENSG00000260479.1	+	sense_intronic	KNOWN	RP11-556H2.3	1	3	0.041951
chr16	79105957	79110882	79108419	ENSG00000260511.1	+	sense_intronic	KNOWN	RP11-556H2.2	1	3	-0.016402
chr16	79202624	79206739	79204681	ENSG00000277954.1	-	antisense	KNOWN	RP11-679B19.1	1	1	-0.006498
chr16	79212711	79229453	79221082	ENSG00000261722.1	-	lincRNA	KNOWN	RP11-679B19.2	1	2	-0.244658
chr16	79264454	79264573	79264513	ENSG00000222244.1	+	rRNA	KNOWN	RNA5SP431	1	1	-0.353568
chr16	79505603	79516293	79510948	ENSG00000261472.1	+	lincRNA	KNOWN	RP11-467I17.1	1	2	0.047017
chr16	79585843	79600714	79593278	ENSG00000178573.6	-	protein_coding	KNOWN	MAF	3	2	-0.138960
chr16	79603572	79604177	79603874	ENSG00000277214.1	+	lincRNA	KNOWN	RP11-70D24.3	1	1	-0.092433
chr16	79605802	79606605	79606203	ENSG00000278058.1	+	lincRNA	KNOWN	RP11-70D24.2	1	1	-0.092433
chr16	79619469	79620110	79619789	ENSG00000275040.1	+	lincRNA	KNOWN	RP11-70D24.4	1	1	-0.024105
chr16	79669655	79669737	79669696	ENSG00000221330.1	-	miRNA	NOVEL	AC009159.1	1	1	-0.013125
chr16	79675685	79677715	79676700	ENSG00000279378.1	-	TEC	KNOWN	RP11-70D24.1	1	1	-0.145952
chr16	79676108	79807922	79742015	ENSG00000260876.5	+	lincRNA	KNOWN	LINC01229	5	6	-0.238262
chr16	79715232	79770563	79742897	ENSG00000261390.5	-	lincRNA	KNOWN	MAFTRR	4	6	-0.153258
chr16	79798050	79827150	79812600	ENSG00000261082.1	-	lincRNA	KNOWN	LINC01228	1	2	-0.343576
chr16	80040662	80045745	80043203	ENSG00000260237.1	+	lincRNA	KNOWN	RP11-148M9.1	1	2	-0.272581
chr16	80065836	80167577	80116706	ENSG00000260706.5	+	lincRNA	KNOWN	RP11-525K10.1	2	4	-0.150107
chr16	80155053	80563135	80359094	ENSG00000259867.5	-	antisense	KNOWN	RP11-525K10.3	6	6	-0.088841
chr16	80179129	80180682	80179905	ENSG00000261376.1	+	lincRNA	KNOWN	RP11-525K10.2	1	2	-0.055907
chr16	80540734	80550760	80545747	ENSG00000168589.14	+	protein_coding	KNOWN	DYNLRB2	6	5	-0.385282
chr16	80547842	80552514	80550178	ENSG00000260183.1	-	antisense	KNOWN	RP11-109P11.1	1	2	-0.207013
chr16	80566794	80572808	80569801	ENSG00000260737.5	-	lincRNA	KNOWN	LINC01227	5	3	0.086434
chr16	80597906	80804329	80701117	ENSG00000166446.14	-	protein_coding	KNOWN	CDYL2	7	8	0.125335
chr16	80627551	80628379	80627965	ENSG00000260064.1	-	sense_intronic	KNOWN	RP11-18F14.4	1	1	0.394555
chr16	80665461	80665563	80665512	ENSG00000265341.1	-	miRNA	NOVEL	AC092332.1	1	1	0.066755
chr16	80736360	80742305	80739332	ENSG00000260594.1	+	antisense	KNOWN	CTD-2055G21.1	1	3	-0.035388
chr16	80828735	80892595	80860665	ENSG00000260896.5	-	lincRNA	KNOWN	PRCAT47	4	4	-0.254951
chr16	80966448	81020270	80993359	ENSG00000103121.8	-	protein_coding	KNOWN	CMC2	24	7	0.013366
chr16	80982319	80984094	80983206	ENSG00000278985.1	-	TEC	KNOWN	RP11-303E16.9	1	1	0.046668
chr16	81006498	81033114	81019806	ENSG00000166451.13	+	protein_coding	KNOWN	CENPN	9	11	0.031353
chr16	81016792	81035759	81026275	ENSG00000260213.5	-	antisense	KNOWN	RP11-303E16.3	3	4	0.036508
chr16	81030770	81031485	81031127	ENSG00000261061.1	+	sense_intronic	KNOWN	RP11-303E16.2	1	1	-0.016785
chr16	81035847	81047358	81041602	ENSG00000166454.9	+	protein_coding	KNOWN	ATMIN	6	4	-0.016785
chr16	81053497	81077267	81065382	ENSG00000166455.13	-	protein_coding	KNOWN	C16orf46	4	4	0.090759
chr16	81053665	81087651	81070658	ENSG00000260643.1	-	processed_transcript	KNOWN	RP11-303E16.8	1	4	0.180224
chr16	81055301	81056426	81055863	ENSG00000261141.1	+	antisense	KNOWN	RP11-303E16.5	1	2	-0.037291
chr16	81069854	81076598	81073226	ENSG00000261838.5	+	antisense	KNOWN	RP11-303E16.6	2	2	0.372494
chr16	81077319	81078861	81078090	ENSG00000245059.2	+	lincRNA	KNOWN	RP11-303E16.7	1	2	0.381498
chr16	81081961	81096403	81089182	ENSG00000140905.9	-	protein_coding	KNOWN	GCSH	6	5	0.288089
chr16	81100875	81220370	81160622	ENSG00000166473.16	-	polymorphic_pseudogene	KNOWN	PKD1L2	13	44	0.294109
chr16	81106533	81106639	81106586	ENSG00000252608.1	-	snRNA	KNOWN	RNU6-1191P	1	1	0.170847
chr16	81170740	81181213	81175976	ENSG00000279362.1	-	protein_coding	KNOWN	AC092718.1	1	7	0.338152
chr16	81238448	81291142	81264795	ENSG00000135697.9	+	protein_coding	KNOWN	BCO1	3	11	0.461358
chr16	81261924	81264091	81263007	ENSG00000280182.1	-	TEC	KNOWN	RP11-626G3.1	1	1	0.526012
chr16	81310731	81313423	81312077	ENSG00000260495.1	-	antisense	KNOWN	RP11-55K13.1	1	1	0.204018
chr16	81314952	81390884	81352918	ENSG00000261609.3	+	protein_coding	KNOWN	GAN	2	11	0.231533
chr16	81385018	81385093	81385055	ENSG00000273048.1	+	miRNA	KNOWN	MIR4720	1	1	0.099769
chr16	81385463	81387560	81386511	ENSG00000272923.1	+	lincRNA	KNOWN	RP11-391L3.1	1	2	0.099769
chr16	81445170	81711762	81578466	ENSG00000153815.16	+	protein_coding	KNOWN	CMIP	12	21	0.644079
chr16	81463892	81464859	81464375	ENSG00000279021.1	-	TEC	KNOWN	RP11-391L3.4	1	1	0.757573
chr16	81476023	81476519	81476271	ENSG00000260229.1	-	processed_pseudogene	KNOWN	RP11-391L3.5	1	1	0.550042
chr16	81517824	81520617	81519220	ENSG00000279476.1	+	TEC	KNOWN	RP11-391L3.3	1	1	0.770064
chr16	81533902	81533966	81533934	ENSG00000277255.1	+	miRNA	KNOWN	MIR7854	1	1	0.698649
chr16	81611348	81611408	81611378	ENSG00000275109.1	+	miRNA	KNOWN	MIR6504	1	1	0.556459
chr16	81617038	81617543	81617290	ENSG00000279681.1	-	TEC	KNOWN	RP11-274A11.5	1	1	0.556459
chr16	81618505	81620563	81619534	ENSG00000279294.1	+	TEC	KNOWN	RP11-274A11.3	1	1	0.556459
chr16	81630193	81632038	81631115	ENSG00000279841.1	+	TEC	KNOWN	RP11-274A11.4	1	1	0.688095
chr16	81738248	81767868	81753058	ENSG00000261218.5	+	lincRNA	KNOWN	RP11-960L18.1	7	5	0.480251
chr16	81739097	81962693	81850895	ENSG00000197943.9	+	protein_coding	KNOWN	PLCG2	17	33	0.118315
chr16	81961926	81962243	81962084	ENSG00000260682.3	+	misc_RNA	KNOWN	RN7SKP176	1	1	0.133333
chr16	81987948	81989016	81988482	ENSG00000276519.1	+	lincRNA	KNOWN	RP11-510J16.6	1	2	-0.008702
chr16	81988855	82011488	82000171	ENSG00000184860.9	-	protein_coding	KNOWN	SDR42E1	3	4	-0.083506
chr16	82035004	82098534	82066769	ENSG00000086696.10	+	protein_coding	KNOWN	HSD17B2	6	5	-0.188587
chr16	82044336	82139631	82091983	ENSG00000261235.1	-	antisense	KNOWN	RP11-510J16.5	2	4	-0.138031
chr16	82111053	82111153	82111103	ENSG00000263636.1	+	miRNA	NOVEL	AC138304.1	1	1	-0.028302
chr16	82120638	82121769	82121203	ENSG00000260161.1	-	processed_pseudogene	KNOWN	MTCYBP28	1	1	-0.028302
chr16	82147798	82170226	82159012	ENSG00000135698.9	-	protein_coding	KNOWN	MPHOSPH6	8	7	-0.136567
chr16	82170296	82175803	82173049	ENSG00000261029.1	+	lincRNA	KNOWN	CTD-2588J6.2	1	2	-0.144243
chr16	82192505	82192790	82192647	ENSG00000251888.1	-	misc_RNA	KNOWN	RN7SKP190	1	1	-0.248596
chr16	82347507	82347579	82347543	ENSG00000264502.1	-	miRNA	NOVEL	AC024590.1	1	1	-0.442885
chr16	82434828	82435381	82435104	ENSG00000259873.1	+	processed_pseudogene	KNOWN	RP11-481E4.1	1	1	-0.444061
chr16	82495993	82510919	82503456	ENSG00000261285.5	-	lincRNA	KNOWN	RP11-481E4.2	2	4	-0.055754
chr16	82554049	82575210	82564629	ENSG00000261176.1	-	lincRNA	KNOWN	RP11-2L4.1	1	3	-0.148491
chr16	82626803	83800640	83213721	ENSG00000140945.15	+	protein_coding	KNOWN	CDH13	17	15	-0.071852
chr16	82688931	82689019	82688975	ENSG00000277387.1	+	miRNA	KNOWN	MIR8058	1	1	0.280437
chr16	82727474	82727694	82727584	ENSG00000280044.1	+	TEC	KNOWN	RP11-22H5.1	1	1	-0.067585
chr16	82773319	82829638	82801478	ENSG00000260862.1	+	sense_intronic	KNOWN	RP11-22H5.2	1	3	-0.078165
chr16	82842086	82842200	82842143	ENSG00000221395.1	+	miRNA	NOVEL	AC099506.1	1	1	-0.292672
chr16	82844455	82844757	82844606	ENSG00000263360.2	+	misc_RNA	KNOWN	RN7SL134P	1	1	-0.292672
chr16	82953230	82990298	82971764	ENSG00000260832.1	-	antisense	KNOWN	CTD-3253I12.1	1	3	-0.145340
chr16	83383007	83398170	83390588	ENSG00000261410.1	-	antisense	KNOWN	RP11-543N12.1	2	3	-0.122761
chr16	83508346	83508408	83508377	ENSG00000263785.1	+	miRNA	KNOWN	MIR3182	1	1	-0.164156
chr16	83710179	83717898	83714038	ENSG00000261103.1	-	antisense	KNOWN	RP11-298D21.3	1	3	0.075409
chr16	83721119	83772936	83747027	ENSG00000260788.5	-	antisense	KNOWN	RP11-298D21.1	4	4	-0.001512
chr16	83725676	83726377	83726026	ENSG00000259914.1	-	antisense	KNOWN	RP11-298D21.2	1	1	0.075409
chr16	83789967	83807834	83798900	ENSG00000260228.5	-	antisense	KNOWN	RP11-483P21.2	4	3	-0.038219
chr16	83807843	83819737	83813790	ENSG00000230989.6	+	protein_coding	KNOWN	HSBP1	4	4	0.139607
chr16	83899126	83927026	83913076	ENSG00000103150.5	+	protein_coding	KNOWN	MLYCD	2	5	0.333497
chr16	83908132	83951445	83929788	ENSG00000260300.5	+	protein_coding	KNOWN	RP11-505K9.4	5	6	0.534434
chr16	83929796	83931223	83930509	ENSG00000260932.1	-	antisense	KNOWN	RP11-483P21.6	2	2	0.693397
chr16	83948282	83966332	83957307	ENSG00000140961.12	+	protein_coding	KNOWN	OSGIN1	7	7	0.598617
chr16	83968632	84002776	83985704	ENSG00000103154.9	+	protein_coding	KNOWN	NECAB2	5	13	0.501356
chr16	84009667	84042636	84026151	ENSG00000166558.10	-	protein_coding	KNOWN	SLC38A8	4	10	0.575894
chr16	84039918	84040033	84039975	ENSG00000199350.1	-	rRNA	KNOWN	RNA5SP432	1	1	0.659032
chr16	84053761	84116906	84085333	ENSG00000140943.16	-	protein_coding	KNOWN	MBTPS1	16	23	0.336731
chr16	84085979	84086590	84086284	ENSG00000274677.1	-	sense_intronic	KNOWN	RP11-505K9.5	1	1	0.006262
chr16	84117051	84117571	84117311	ENSG00000260018.1	+	antisense	KNOWN	RP11-505K9.1	1	1	0.686232
chr16	84119293	84121153	84120223	ENSG00000260410.2	+	processed_pseudogene	KNOWN	RP11-505K9.3	1	2	0.686232
chr16	84122146	84145192	84133669	ENSG00000103160.11	-	protein_coding	KNOWN	HSDL1	8	7	0.486354
chr16	84145287	84178767	84162027	ENSG00000154099.17	+	protein_coding	KNOWN	DNAAF1	10	12	0.521972
chr16	84177847	84187070	84182458	ENSG00000103168.16	-	protein_coding	KNOWN	TAF1C	23	15	0.761843
chr16	84191138	84197168	84194153	ENSG00000140955.10	+	protein_coding	KNOWN	ADAD2	9	11	0.886481
chr16	84192558	84197053	84194805	ENSG00000250685.7	-	antisense	KNOWN	RP11-486L19.2	4	5	0.886481
chr16	84218667	84239750	84229208	ENSG00000168418.7	-	protein_coding	KNOWN	KCNG4	2	3	0.612927
chr16	84255270	84261049	84258159	ENSG00000260858.1	-	lincRNA	KNOWN	RP11-558A11.1	1	3	0.476504
chr16	84262815	84262928	84262871	ENSG00000201361.1	-	rRNA	KNOWN	RNA5SP433	1	1	0.476504
chr16	84294646	84329851	84312248	ENSG00000103175.10	+	protein_coding	KNOWN	WFDC1	5	7	0.647852
chr16	84295498	84296985	84296241	ENSG00000260530.1	-	antisense	KNOWN	RP11-558A11.2	1	2	0.653108
chr16	84342464	84343407	84342935	ENSG00000260504.1	-	lincRNA	KNOWN	RP11-558A11.3	1	2	0.260389
chr16	84368527	84464187	84416357	ENSG00000064270.12	+	protein_coding	KNOWN	ATP2C2	15	28	0.519012
chr16	84459259	84467361	84463310	ENSG00000261286.1	-	antisense	KNOWN	RP11-517C16.2	1	3	0.682807
chr16	84476421	84554033	84515227	ENSG00000140950.15	-	protein_coding	KNOWN	TLDC1	9	9	0.619441
chr16	84495599	84497495	84496547	ENSG00000261243.1	+	antisense	KNOWN	RP11-517C16.4	1	2	0.416831
chr16	84565594	84618077	84591835	ENSG00000103187.7	-	protein_coding	KNOWN	COTL1	6	4	0.650968
chr16	84594393	84596826	84595609	ENSG00000261471.1	+	antisense	KNOWN	RP11-61F12.1	1	1	0.662988
chr16	84648525	84667686	84658105	ENSG00000135686.12	+	protein_coding	KNOWN	KLHL36	7	5	0.476970
chr16	84699978	84779922	84739950	ENSG00000103194.15	+	protein_coding	KNOWN	USP10	19	15	0.418066
chr16	84819984	84920768	84870376	ENSG00000103196.11	+	protein_coding	KNOWN	CRISPLD2	11	15	0.813570
chr16	84828263	84829242	84828752	ENSG00000260859.1	+	sense_intronic	KNOWN	RP11-254F19.2	1	2	0.798861
chr16	84852968	84853067	84853017	ENSG00000265249.1	+	miRNA	NOVEL	AC025280.1	1	1	0.755810
chr16	84917377	84919923	84918650	ENSG00000279622.1	-	TEC	KNOWN	RP11-254F19.4	1	1	0.514807
chr16	84928353	84939603	84933978	ENSG00000260340.1	+	lincRNA	KNOWN	RP11-254F19.3	1	3	0.849920
chr16	84974181	85011535	84992858	ENSG00000153786.12	-	protein_coding	KNOWN	ZDHHC7	8	10	0.631225
chr16	85027751	85094230	85060990	ENSG00000135709.12	+	protein_coding	KNOWN	KIAA0513	7	13	0.639118
chr16	85098358	85112508	85105433	ENSG00000153789.12	-	protein_coding	KNOWN	FAM92B	3	9	0.837459
chr16	85137150	85149443	85143296	ENSG00000278214.1	+	lincRNA	KNOWN	RP11-442O1.4	1	3	0.507029
chr16	85142696	85146001	85144348	ENSG00000275088.1	-	lincRNA	KNOWN	RP11-442O1.3	1	1	0.507029
chr16	85160295	85160381	85160338	ENSG00000276331.1	+	miRNA	NOVEL	AC092275.1	1	1	0.485259
chr16	85171276	85185363	85178319	ENSG00000262601.1	+	lincRNA	KNOWN	CTC-786C10.1	1	2	0.783475
chr16	85278820	85279035	85278927	ENSG00000270313.1	-	processed_pseudogene	KNOWN	COX6CP16	1	1	0.853111
chr16	85282958	85285963	85284460	ENSG00000179219.5	+	lincRNA	KNOWN	LINC00311	1	2	0.853111
chr16	85306226	85306325	85306275	ENSG00000266307.1	-	miRNA	KNOWN	MIR5093	1	1	0.564745
chr16	85357463	85359449	85358456	ENSG00000261567.1	+	lincRNA	KNOWN	RP11-680G10.1	1	2	0.846581
chr16	85441423	85441492	85441457	ENSG00000264203.1	-	miRNA	NOVEL	AC092377.1	1	1	0.729973
chr16	85489813	85490831	85490322	ENSG00000278716.1	+	lincRNA	KNOWN	LA16c-352F7.1	1	1	0.857759
chr16	85580009	85583571	85581790	ENSG00000270124.1	-	lincRNA	KNOWN	RP11-118F19.1	1	3	0.915114
chr16	85592266	85595720	85593993	ENSG00000260417.1	+	lincRNA	KNOWN	CTD-2542L18.1	1	1	0.679551
chr16	85611409	85676204	85643806	ENSG00000131149.17	+	protein_coding	KNOWN	GSE1	12	16	0.962095
chr16	85659378	85659675	85659526	ENSG00000263968.2	+	misc_RNA	KNOWN	RN7SL381P	1	1	1.159555
chr16	85676198	85690073	85683135	ENSG00000131153.8	-	protein_coding	KNOWN	GINS2	3	5	0.679061
chr16	85690084	85751129	85720606	ENSG00000154102.10	-	protein_coding	KNOWN	C16orf74	7	5	0.670876
chr16	85697335	85697868	85697601	ENSG00000275393.1	-	sense_intronic	KNOWN	RP11-568J23.8	1	1	0.565593
chr16	85743287	85744225	85743756	ENSG00000269898.1	+	antisense	KNOWN	RP11-568J23.4	1	2	0.806590
chr16	85771758	85799608	85785683	ENSG00000131148.8	-	protein_coding	KNOWN	EMC8	6	5	0.476815
chr16	85781775	85781899	85781837	ENSG00000252311.1	-	snRNA	KNOWN	RNU1-103P	1	1	0.485528
chr16	85784382	85787617	85785999	ENSG00000270184.1	+	antisense	KNOWN	RP11-568J23.5	1	2	0.485528
chr16	85792415	85792933	85792674	ENSG00000270159.1	+	antisense	KNOWN	RP11-568J23.6	1	2	0.460276
chr16	85798633	85807044	85802838	ENSG00000131143.8	+	protein_coding	KNOWN	COX4I1	18	5	0.460276
chr16	85814425	85815062	85814743	ENSG00000270698.1	-	processed_pseudogene	KNOWN	RP11-568J23.7	1	2	0.458120
chr16	85815873	85816536	85816204	ENSG00000214259.3	-	processed_pseudogene	KNOWN	RP11-568J23.1	1	1	0.458120
chr16	85859521	85862012	85860766	ENSG00000279907.1	+	TEC	KNOWN	RP11-568J23.2	1	1	0.452739
chr16	85898803	85922609	85910706	ENSG00000140968.10	+	protein_coding	KNOWN	IRF8	11	9	0.312329
chr16	85918347	85918416	85918381	ENSG00000274134.1	+	miRNA	KNOWN	MIR6774	1	1	0.382893
chr16	85935281	85936223	85935752	ENSG00000268804.1	-	lincRNA	KNOWN	RP11-542M13.3	1	2	0.412251
chr16	85981750	85984723	85983236	ENSG00000269667.1	+	lincRNA	KNOWN	RP11-542M13.2	1	2	0.334126
chr16	86035627	86036419	86036023	ENSG00000279604.1	+	TEC	KNOWN	RP11-542M13.1	1	1	0.823503
chr16	86081409	86089526	86085467	ENSG00000261177.1	-	lincRNA	KNOWN	RP11-805I24.1	1	2	0.663458
chr16	86158206	86158798	86158502	ENSG00000268078.1	-	lincRNA	KNOWN	RP11-805I24.4	1	2	0.050769
chr16	86192793	86198913	86195853	ENSG00000268505.1	-	lincRNA	KNOWN	RP11-805I24.3	1	3	0.202491
chr16	86196181	86199720	86197950	ENSG00000269186.1	+	lincRNA	KNOWN	LINC01082	1	2	0.202491
chr16	86221423	86222729	86222076	ENSG00000270058.1	-	lincRNA	KNOWN	RP11-514D23.3	1	2	0.477282
chr16	86225580	86275745	86250662	ENSG00000268754.1	-	lincRNA	KNOWN	RP11-514D23.2	1	5	0.232062
chr16	86275429	86275523	86275476	ENSG00000199949.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.046188
chr16	86286427	86293389	86289908	ENSG00000268532.1	+	lincRNA	KNOWN	RP11-514D23.1	1	3	0.042470
chr16	86331844	86349683	86340763	ENSG00000168367.9	-	lincRNA	KNOWN	LINC00917	7	7	0.536294
chr16	86347387	86349611	86348499	ENSG00000269826.1	+	lincRNA	KNOWN	RP11-158I3.3	1	3	0.536294
chr16	86434830	86435884	86435357	ENSG00000268473.1	-	processed_pseudogene	KNOWN	RP11-158I3.1	1	2	0.588516
chr16	86474529	86509099	86491814	ENSG00000268388.5	-	lincRNA	KNOWN	FENDRR	7	4	0.482393
chr16	86510527	86515418	86512972	ENSG00000103241.6	+	protein_coding	KNOWN	FOXF1	1	2	0.690629
chr16	86510780	86510877	86510828	ENSG00000277360.1	-	miRNA	NOVEL	AC009108.2	1	1	0.690629
chr16	86520383	86523897	86522140	ENSG00000270020.1	-	lincRNA	KNOWN	RP11-463O9.9	1	1	0.690629
chr16	86525457	86526252	86525854	ENSG00000243697.1	+	processed_pseudogene	KNOWN	RP11-463O9.1	1	1	0.690629
chr16	86530176	86555235	86542705	ENSG00000103248.18	-	protein_coding	KNOWN	MTHFSD	20	9	0.311752
chr16	86555320	86557299	86556309	ENSG00000280278.1	+	TEC	KNOWN	FLJ30679	1	1	0.267969
chr16	86565145	86567761	86566453	ENSG00000260944.1	-	antisense	KNOWN	FOXC2-AS1	1	2	0.267969
chr16	86567251	86569728	86568489	ENSG00000176692.5	+	protein_coding	KNOWN	FOXC2	1	1	0.267969
chr16	86576368	86582160	86579264	ENSG00000176678.5	+	protein_coding	KNOWN	FOXL1	2	2	0.579856
chr16	86595189	86597639	86596414	ENSG00000279142.1	+	TEC	KNOWN	RP11-463O9.2	1	1	0.454562
chr16	86613416	86613498	86613457	ENSG00000275934.1	-	miRNA	NOVEL	AC009108.1	1	1	0.616654
chr16	86636328	86637145	86636736	ENSG00000260387.1	-	lincRNA	KNOWN	RP11-463O9.6	1	2	0.676954
chr16	86646301	86668923	86657612	ENSG00000261161.1	+	lincRNA	KNOWN	RP11-58A18.1	1	3	0.354941
chr16	86698118	86698841	86698479	ENSG00000274478.1	+	lincRNA	KNOWN	RP11-58A18.2	1	1	0.434384
chr16	86720688	86721954	86721321	ENSG00000260026.1	-	lincRNA	KNOWN	CTD-2015G9.1	1	2	0.773572
chr16	86722091	86741059	86731575	ENSG00000261175.5	+	lincRNA	KNOWN	CTD-2015G9.2	2	4	0.541309
chr16	86906175	86906472	86906323	ENSG00000260795.1	-	processed_pseudogene	KNOWN	RP11-107C10.1	1	1	0.560610
chr16	87057784	87063991	87060887	ENSG00000232190.2	+	lincRNA	KNOWN	RP11-134D3.1	1	3	0.797970
chr16	87066705	87069752	87068228	ENSG00000261363.2	+	lincRNA	KNOWN	RP11-134D3.2	1	2	0.797970
chr16	87083562	87317420	87200491	ENSG00000260456.6	-	protein_coding	KNOWN	C16orf95	7	7	0.514983
chr16	87212122	87226430	87219276	ENSG00000261095.1	+	lincRNA	KNOWN	RP11-899L11.1	1	3	0.503125
chr16	87215915	87216452	87216183	ENSG00000261651.1	+	antisense	KNOWN	RP11-899L11.3	1	2	0.503125
chr16	87262759	87292438	87277598	ENSG00000261697.5	-	sense_intronic	KNOWN	RP11-178L8.5	4	5	0.596023
chr16	87268185	87268337	87268261	ENSG00000243705.1	+	processed_pseudogene	KNOWN	RP11-178L8.1	1	1	0.450623
chr16	87296949	87297633	87297291	ENSG00000280419.1	+	TEC	KNOWN	RP11-178L8.6	1	1	0.695102
chr16	87302876	87334273	87318574	ENSG00000131152.4	-	protein_coding	KNOWN	RP11-178L8.4	1	5	0.533690
chr16	87317509	87318043	87317776	ENSG00000270006.2	+	antisense	KNOWN	RP11-178L8.7	1	2	0.368257
chr16	87326987	87327584	87327285	ENSG00000270082.1	+	antisense	KNOWN	RP11-178L8.8	1	2	0.368257
chr16	87326987	87392142	87359564	ENSG00000103264.15	-	protein_coding	KNOWN	FBXO31	8	10	0.642763
chr16	87362536	87367476	87365006	ENSG00000269901.1	+	antisense	KNOWN	RP11-178L8.9	1	2	0.575139
chr16	87383995	87404779	87394387	ENSG00000140941.12	+	protein_coding	KNOWN	MAP1LC3B	9	5	0.624477
chr16	87396704	87400295	87398499	ENSG00000261592.1	-	antisense	KNOWN	RP11-178L8.3	1	2	0.737810
chr16	87406246	87492045	87449145	ENSG00000140948.11	-	protein_coding	KNOWN	ZCCHC14	4	14	0.593415
chr16	87467138	87467654	87467396	ENSG00000276393.1	+	unprocessed_pseudogene	KNOWN	RP11-106D4.3	1	1	0.737327
chr16	87470370	87474370	87472370	ENSG00000276337.1	-	sense_intronic	KNOWN	RP11-106D4.2	1	1	0.353697
chr16	87492555	87515635	87504095	ENSG00000260750.5	+	lincRNA	KNOWN	RP11-482M8.1	3	4	0.618090
chr16	87600526	87602190	87601358	ENSG00000269935.1	-	antisense	KNOWN	RP11-482M8.3	1	1	0.509113
chr16	87601835	87698156	87649995	ENSG00000154118.12	+	protein_coding	KNOWN	JPH3	4	6	0.669996
chr16	87683945	87684477	87684211	ENSG00000277504.1	-	antisense	KNOWN	RP11-278A23.4	1	1	0.514225
chr16	87693537	87696147	87694842	ENSG00000226180.3	-	lincRNA	KNOWN	RP11-278A23.1	1	1	0.825766
chr16	87696485	87765992	87731238	ENSG00000104731.13	-	protein_coding	KNOWN	KLHDC4	27	17	0.784779
chr16	87739771	87747706	87743738	ENSG00000260671.2	-	sense_intronic	KNOWN	RP11-278A23.2	1	3	0.690787
chr16	87773488	87779374	87776431	ENSG00000260498.5	-	lincRNA	KNOWN	RP4-536B24.4	2	3	0.913394
chr16	87780134	87806476	87793305	ENSG00000260177.1	-	lincRNA	KNOWN	RP4-536B24.3	1	2	0.707024
chr16	87830023	87869488	87849755	ENSG00000103257.8	-	protein_coding	KNOWN	SLC7A5	3	10	1.126691
chr16	87834592	87834660	87834626	ENSG00000278598.1	-	miRNA	KNOWN	MIR6775	1	1	1.432221
chr16	87836532	87837663	87837097	ENSG00000260466.1	+	antisense	KNOWN	RP4-536B24.2	1	2	1.432221
chr16	87881546	87936529	87909037	ENSG00000174990.4	-	protein_coding	KNOWN	CA5A	3	7	0.652293
chr16	87892938	87893685	87893311	ENSG00000260603.1	-	sense_intronic	KNOWN	GS1-21A4.1	1	2	0.665983
chr16	87892955	87893735	87893345	ENSG00000270385.1	+	processed_pseudogene	KNOWN	GS1-21A4.2	1	2	0.665983
chr16	87945058	87945202	87945130	ENSG00000260443.1	-	processed_pseudogene	KNOWN	CTD-3057O21.1	1	1	0.651145
chr16	87949244	88118422	88033833	ENSG00000172530.19	+	protein_coding	KNOWN	BANP	28	14	0.819205
chr16	88079161	88087383	88083272	ENSG00000261193.1	-	lincRNA	KNOWN	RP11-863P13.5	1	2	0.953608
chr16	88087387	88087932	88087659	ENSG00000260166.1	+	lincRNA	KNOWN	RP11-863P13.6	1	2	0.953608
chr16	88088041	88100985	88094513	ENSG00000205037.2	-	lincRNA	KNOWN	RP11-863P13.4	2	2	0.905393
chr16	88177289	88178646	88177967	ENSG00000260162.2	+	lincRNA	KNOWN	RP11-863P13.1	1	2	0.599786
chr16	88177298	88178941	88178119	ENSG00000261327.4	-	lincRNA	KNOWN	RP11-863P13.3	2	2	0.599786
chr16	88191486	88193667	88192576	ENSG00000261816.1	-	lincRNA	KNOWN	RP11-863P13.2	1	3	0.784208
chr16	88194281	88195217	88194749	ENSG00000260420.2	+	lincRNA	KNOWN	LA16c-444G7.2	1	3	0.784208
chr16	88234785	88302511	88268648	ENSG00000261273.1	+	lincRNA	KNOWN	LA16c-444G7.1	1	4	0.746396
chr16	88427471	88440757	88434114	ENSG00000225614.2	+	protein_coding	KNOWN	ZNF469	2	2	1.005190
chr16	88453317	88537016	88495166	ENSG00000179588.8	+	protein_coding	KNOWN	ZFPM1	5	10	1.166402
chr16	88468918	88469031	88468974	ENSG00000263456.1	+	miRNA	KNOWN	MIR5189	1	1	1.005903
chr16	88512960	88531053	88522006	ENSG00000261744.1	-	antisense	KNOWN	RP11-21B21.4	1	4	1.226760
chr16	88570381	88631966	88601173	ENSG00000158545.15	+	protein_coding	KNOWN	ZC3H18	12	19	0.807172
chr16	88638591	88640473	88639532	ENSG00000124391.4	+	protein_coding	KNOWN	IL17C	2	3	1.256528
chr16	88643283	88651152	88647217	ENSG00000051523.10	-	protein_coding	KNOWN	CYBA	10	6	1.293992
chr16	88651935	88663161	88657548	ENSG00000167508.10	-	protein_coding	KNOWN	MVD	18	12	1.512210
chr16	88663298	88687186	88675242	ENSG00000260630.6	+	antisense	KNOWN	SNAI3-AS1	6	4	1.324198
chr16	88677682	88686493	88682087	ENSG00000185669.5	-	protein_coding	KNOWN	SNAI3	1	3	1.250895
chr16	88686544	88687053	88686798	ENSG00000280603.1	-	protein_coding	KNOWN	AC138028.1	1	2	1.250895
chr16	88696495	88706421	88701458	ENSG00000158717.10	-	protein_coding	KNOWN	RNF166	11	6	1.130352
chr16	88696501	88698610	88697555	ENSG00000259813.1	+	antisense	KNOWN	RP5-1142A6.5	1	2	1.130352
chr16	88706463	88715386	88710924	ENSG00000174177.12	+	protein_coding	KNOWN	CTU2	10	15	1.379892
chr16	88708956	88710437	88709696	ENSG00000278341.1	-	antisense	KNOWN	RP5-1142A6.10	1	1	1.252595
chr16	88715343	88785211	88750277	ENSG00000103335.19	-	protein_coding	KNOWN	PIEZO1	15	51	1.489431
chr16	88716278	88716337	88716307	ENSG00000265672.1	-	miRNA	KNOWN	MIR4722	1	1	1.543688
chr16	88718615	88720459	88719537	ENSG00000260121.1	+	antisense	KNOWN	RP5-1142A6.9	1	1	1.543688
chr16	88731180	88741425	88736302	ENSG00000224888.4	+	antisense	KNOWN	RP5-1142A6.2	2	3	1.460062
chr16	88741631	88742367	88741999	ENSG00000260617.1	+	antisense	KNOWN	RP5-1142A6.7	1	2	1.460062
chr16	88742767	88745748	88744257	ENSG00000182376.2	+	antisense	KNOWN	RP5-1142A6.8	2	3	1.460062
chr16	88803213	88809258	88806235	ENSG00000167513.8	+	protein_coding	KNOWN	CDT1	3	10	1.455682
chr16	88809339	88811944	88810641	ENSG00000198931.10	-	protein_coding	KNOWN	APRT	11	5	1.283638
chr16	88813734	88856970	88835352	ENSG00000141012.12	-	protein_coding	KNOWN	GALNS	13	15	1.216383
chr16	88827958	88828137	88828047	ENSG00000280675.1	+	protein_coding	KNOWN	AC092384.1	1	2	1.225258
chr16	88856220	88862686	88859453	ENSG00000167515.10	+	protein_coding	KNOWN	TRAPPC2L	15	6	1.021170
chr16	88863333	88866660	88864996	ENSG00000205022.9	-	protein_coding	KNOWN	PABPN1L	3	7	1.021170
chr16	88874858	88977204	88926031	ENSG00000129993.14	-	protein_coding	KNOWN	CBFA2T3	11	12	1.104427
chr16	88881038	88887136	88884087	ENSG00000259881.1	+	antisense	KNOWN	RP11-830F9.5	4	3	1.189688
chr16	88936779	88939651	88938215	ENSG00000261226.1	-	sense_intronic	KNOWN	RP11-830F9.7	2	2	1.096410
chr16	88939789	88951524	88945656	ENSG00000205018.2	+	antisense	KNOWN	RP11-830F9.6	1	2	1.100670
chr16	88984032	88995369	88989700	ENSG00000259989.1	+	lincRNA	KNOWN	CTD-2555A7.1	1	3	1.016421
chr16	89046172	89052965	89049568	ENSG00000256982.1	-	lincRNA	KNOWN	CTD-2555A7.2	1	2	0.965133
chr16	89088375	89155846	89122110	ENSG00000176715.15	+	protein_coding	KNOWN	ACSF3	18	11	0.802813
chr16	89113175	89115279	89114227	ENSG00000261546.1	-	antisense	KNOWN	CTD-2555A7.3	1	1	0.889499
chr16	89159146	89164245	89161695	ENSG00000180422.3	+	lincRNA	KNOWN	LINC00304	3	4	1.015513
chr16	89166383	89169147	89167765	ENSG00000205015.1	+	lincRNA	KNOWN	RP11-46C24.3	1	3	1.015513
chr16	89171767	89195492	89183629	ENSG00000129910.7	+	protein_coding	KNOWN	CDH15	3	14	1.347440
chr16	89195761	89201664	89198712	ENSG00000259803.6	-	protein_coding	KNOWN	SLC22A31	6	10	1.208856
chr16	89215211	89217653	89216432	ENSG00000259877.2	-	antisense	KNOWN	RP11-46C24.7	1	1	0.836581
chr16	89217703	89237071	89227387	ENSG00000170100.13	+	protein_coding	KNOWN	ZNF778	7	7	0.745841
chr16	89226807	89228692	89227749	ENSG00000260659.1	-	antisense	KNOWN	RP11-46C24.6	1	2	0.836581
chr16	89267627	89490561	89379094	ENSG00000167522.14	-	protein_coding	KNOWN	ANKRD11	18	14	0.906623
chr16	89268104	89273044	89270574	ENSG00000268218.1	+	antisense	KNOWN	AC137932.4	1	2	0.959303
chr16	89297508	89298317	89297912	ENSG00000260279.2	+	antisense	KNOWN	AC137932.5	2	2	1.173063
chr16	89321133	89325110	89323121	ENSG00000261253.2	+	antisense	KNOWN	AC137932.6	2	3	0.996308
chr16	89392375	89412564	89402469	ENSG00000261574.1	-	sense_intronic	KNOWN	RP1-168P16.2	1	2	0.824491
chr16	89420075	89422226	89421150	ENSG00000261692.1	-	sense_intronic	KNOWN	RP1-168P16.1	1	2	1.116654
chr16	89443318	89443424	89443371	ENSG00000252887.1	+	snRNA	KNOWN	RNU6-430P	1	1	0.789429
chr16	89458870	89459437	89459153	ENSG00000270832.1	+	processed_pseudogene	KNOWN	RP1-168P16.3	1	1	0.718060
chr16	89490917	89557768	89524342	ENSG00000197912.13	+	protein_coding	KNOWN	SPG7	23	28	1.100375
chr16	89492017	89504460	89498238	ENSG00000261118.1	-	antisense	KNOWN	RP11-104N10.1	2	3	1.117894
chr16	89516797	89522217	89519507	ENSG00000274627.1	+	sense_intronic	KNOWN	RP11-104N10.2	1	1	0.918976
chr16	89560657	89566828	89563742	ENSG00000167526.13	+	protein_coding	KNOWN	RPL13	15	7	1.196522
chr16	89561434	89561517	89561475	ENSG00000200084.1	+	snoRNA	KNOWN	SNORD68	1	1	1.196522
chr16	89575768	89597246	89586507	ENSG00000178773.14	+	protein_coding	KNOWN	CPNE7	9	17	1.478576
chr16	89613308	89638456	89625882	ENSG00000015413.9	+	protein_coding	KNOWN	DPEP1	9	11	1.222404
chr16	89644431	89657845	89651138	ENSG00000131165.14	-	protein_coding	KNOWN	CHMP1A	10	7	1.223893
chr16	89657802	89671272	89664537	ENSG00000167523.13	+	protein_coding	KNOWN	SPATA33	10	3	1.255624
chr16	89680737	89696364	89688550	ENSG00000185324.21	+	protein_coding	KNOWN	CDK10	22	13	1.130621
chr16	89682620	89686569	89684594	ENSG00000260259.1	-	lincRNA	KNOWN	RP11-368I7.4	1	3	1.063233
chr16	89684642	89685304	89684973	ENSG00000275734.1	+	antisense	KNOWN	RP11-368I7.6	1	1	1.063233
chr16	89696343	89701705	89699024	ENSG00000158792.15	-	protein_coding	KNOWN	SPATA2L	3	4	1.228680
chr16	89707134	89720986	89714060	ENSG00000075399.12	-	protein_coding	KNOWN	VPS9D1	8	17	1.475454
chr16	89711856	89718165	89715010	ENSG00000261373.1	+	antisense	KNOWN	VPS9D1-AS1	2	4	1.539804
chr16	89720400	89740903	89730651	ENSG00000158805.11	+	protein_coding	KNOWN	ZNF276	12	11	1.471797
chr16	89737549	89816657	89777103	ENSG00000187741.14	-	protein_coding	KNOWN	FANCA	32	43	1.051613
chr16	89818179	89871319	89844749	ENSG00000204991.10	+	protein_coding	KNOWN	SPIRE2	10	15	1.098012
chr16	89873586	89911384	89892485	ENSG00000141002.18	+	protein_coding	KNOWN	TCF25	25	19	1.425522
chr16	89906157	89918233	89912195	ENSG00000267048.1	+	processed_transcript	KNOWN	RP11-566K11.7	1	3	1.325624
chr16	89912119	89920977	89916548	ENSG00000258839.2	+	protein_coding	KNOWN	MC1R	3	4	1.293199
chr16	89919165	89936092	89927628	ENSG00000198211.8	+	protein_coding	KNOWN	RP11-566K11.2	1	5	1.319532
chr16	89919827	89922662	89921244	ENSG00000259006.1	-	antisense	KNOWN	RP11-566K11.4	1	2	1.293199
chr16	89921392	89938761	89930076	ENSG00000258947.6	+	protein_coding	KNOWN	TUBB3	15	5	1.330103
chr16	89947925	89968060	89957992	ENSG00000140995.16	+	protein_coding	KNOWN	DEF8	29	14	0.980538
chr16	89969791	89972534	89971162	ENSG00000177946.5	-	protein_coding	KNOWN	CENPBD1	2	2	0.989333
chr16	89969791	89972544	89971167	ENSG00000261317.1	+	antisense	KNOWN	RP11-566K11.5	1	2	0.989349
chr16	89972586	90002161	89987373	ENSG00000223959.8	+	unitary_pseudogene	KNOWN	AFG3L1P	17	17	1.034114
chr16	90004865	90020128	90012496	ENSG00000003249.13	-	protein_coding	KNOWN	DBNDD1	7	5	1.153593
chr16	90019629	90044975	90032302	ENSG00000141013.14	+	protein_coding	KNOWN	GAS8	21	11	0.900286
chr16	90028908	90029367	90029137	ENSG00000221819.5	-	antisense	KNOWN	GAS8-AS1	2	1	1.184816
chr16	90039761	90047773	90043767	ENSG00000222019.7	-	transcribed_unprocessed_pseudogene	KNOWN	URAHP	5	5	0.703266
chr16	90056566	90092072	90074319	ENSG00000126856.13	-	protein_coding	KNOWN	PRDM7	5	10	0.541904
chr16	90093154	90096354	90094754	ENSG00000261812.6	+	transcribed_unprocessed_pseudogene	KNOWN	TUBB8P7	4	4	0.393782
chr16	90102271	90186204	90144237	ENSG00000260528.3	+	lincRNA	KNOWN	FAM157C	5	9	0.252097
chr16	90105095	90106316	90105705	ENSG00000260507.1	-	lincRNA	KNOWN	RP11-356C4.3	1	2	0.393782
chr16	90110574	90168225	90139399	ENSG00000261172.1	-	lincRNA	KNOWN	RP11-356C4.5	2	3	0.152582
chr16	90144592	90144695	90144643	ENSG00000222359.1	+	snRNA	KNOWN	RNU6-355P	1	1	0.201616
chr16	90174062	90175865	90174963	ENSG00000277349.1	-	unprocessed_pseudogene	KNOWN	RP11-356C4.6	1	1	0.552966
chr16	90185997	90222678	90204337	ENSG00000260923.5	+	lincRNA	KNOWN	AC137934.1	6	4	-0.134392
chr16_KI270728v1_random	17234	19833	18533	ENSG00000274175.1	+	protein_coding	KNOWN	AC133551.1	1	2	NA
chr16_KI270728v1_random	137798	139135	138466	ENSG00000273843.1	+	processed_pseudogene	NOVEL	AC009091.1	1	1	NA
chr16_KI270728v1_random	933862	936467	935164	ENSG00000275869.1	-	protein_coding	KNOWN	AC136612.1	1	2	NA
chr16_KI270728v1_random	1109945	1110235	1110090	ENSG00000278510.1	+	processed_pseudogene	NOVEL	AC007908.1	1	1	NA
chr16_KI270728v1_random	1139577	1147868	1143722	ENSG00000273554.4	-	protein_coding	NOVEL	AC136616.1	2	15	NA
chr16_KI270728v1_random	1157687	1240349	1199018	ENSG00000278782.1	+	protein_coding	NOVEL	AC136616.3	1	3	NA
chr16_KI270728v1_random	1167457	1257196	1212326	ENSG00000277761.1	+	protein_coding	NOVEL	AC136616.2	2	4	NA
chr16_KI270728v1_random	1270984	1271271	1271127	ENSG00000277836.1	+	protein_coding	NOVEL	AC141272.1	1	1	NA
chr17	64099	76866	70482	ENSG00000280279.1	-	lincRNA	KNOWN	RP11-1228E12.1	1	5	0.173903
chr17	88641	118578	103609	ENSG00000280136.2	-	lincRNA	KNOWN	RP11-1228E12.2	1	8	0.259946
chr17	90796	90899	90847	ENSG00000277613.1	-	snRNA	NOVEL	U6	1	1	0.251190
chr17	137526	139067	138296	ENSG00000268320.3	+	protein_coding	KNOWN	SCGB1C2	1	3	0.533590
chr17	142789	181636	162212	ENSG00000272636.3	-	protein_coding	KNOWN	DOC2B	3	9	0.728536
chr17	155168	155255	155211	ENSG00000273288.1	-	miRNA	NOVEL	AC108004.1	1	1	0.861935
chr17	183824	191587	187705	ENSG00000273172.1	-	lincRNA	KNOWN	AC108004.2	1	3	0.597318
chr17	212389	386254	299321	ENSG00000181031.15	-	protein_coding	KNOWN	RPH3AL	22	10	0.516872
chr17	321392	322453	321922	ENSG00000262920.5	+	antisense	KNOWN	RP11-1260E13.1	2	2	0.738760
chr17	331205	333488	332346	ENSG00000262061.5	+	processed_transcript	KNOWN	RP11-1260E13.4	5	3	0.334193
chr17	352638	357581	355109	ENSG00000262294.1	+	antisense	KNOWN	RP11-1260E13.2	1	2	0.580182
chr17	354737	356882	355809	ENSG00000262558.1	+	antisense	KNOWN	RP11-1260E13.3	1	2	0.580182
chr17	404468	414023	409245	ENSG00000241525.4	-	antisense	KNOWN	AC108004.3	3	3	0.581395
chr17	410327	431062	420694	ENSG00000187624.8	+	protein_coding	KNOWN	C17orf97	5	5	0.527935
chr17	439978	445939	442958	ENSG00000183688.4	-	protein_coding	KNOWN	FAM101B	1	2	0.567629
chr17	503171	511347	507259	ENSG00000263015.1	+	antisense	KNOWN	RP5-1029F21.3	1	3	0.617154
chr17	508668	721717	615192	ENSG00000141252.19	-	protein_coding	KNOWN	VPS53	20	22	0.558295
chr17	523140	540576	531858	ENSG00000263300.1	+	antisense	KNOWN	RP5-1029F21.4	1	2	0.579894
chr17	552566	553417	552991	ENSG00000262905.1	+	antisense	KNOWN	RP5-1029F21.2	1	2	0.489956
chr17	616002	616595	616298	ENSG00000262708.1	+	processed_pseudogene	KNOWN	RP11-411G7.2	1	1	0.445008
chr17	656794	657547	657170	ENSG00000244097.1	-	processed_pseudogene	KNOWN	RPS4XP17	1	1	0.462360
chr17	732412	742972	737692	ENSG00000167695.14	+	protein_coding	KNOWN	FAM57A	7	5	0.768915
chr17	744414	753999	749206	ENSG00000179409.10	-	protein_coding	KNOWN	GEMIN4	7	3	0.759138
chr17	752660	755336	753998	ENSG00000231784.8	+	unitary_pseudogene	KNOWN	DBIL5P	4	2	0.745486
chr17	757097	783390	770243	ENSG00000167699.13	-	protein_coding	KNOWN	GLOD4	19	13	0.634958
chr17	763565	765319	764442	ENSG00000262228.2	-	lincRNA	KNOWN	RP11-676J12.4	2	2	0.745486
chr17	775201	775574	775387	ENSG00000281182.1	-	protein_coding	KNOWN	AC087392.1	1	2	0.528466
chr17	782273	792509	787391	ENSG00000171861.10	+	protein_coding	KNOWN	RNMTL1	4	4	0.612303
chr17	789744	790525	790134	ENSG00000262434.1	-	antisense	KNOWN	RP11-676J12.8	1	2	0.758730
chr17	795306	795794	795550	ENSG00000277491.1	+	lincRNA	KNOWN	RP11-676J12.9	1	1	0.870360
chr17	799313	979770	889541	ENSG00000167693.16	-	protein_coding	KNOWN	NXN	12	8	0.783142
chr17	877902	880093	878997	ENSG00000262133.1	+	antisense	KNOWN	RP11-676J12.6	1	2	0.806465
chr17	909632	911212	910422	ENSG00000262003.1	+	antisense	KNOWN	RP11-676J12.7	1	2	0.777141
chr17	959034	959366	959200	ENSG00000263017.1	+	processed_pseudogene	KNOWN	RP11-356I18.1	1	1	1.017991
chr17	982036	982121	982078	ENSG00000265403.1	+	miRNA	NOVEL	AC015884.1	1	1	0.717247
chr17	997117	1003671	1000394	ENSG00000177370.4	+	protein_coding	KNOWN	TIMM22	1	4	0.665320
chr17	1003518	1229021	1116269	ENSG00000159842.14	-	protein_coding	KNOWN	ABR	36	23	0.981791
chr17	1022476	1022559	1022517	ENSG00000264429.1	-	miRNA	KNOWN	MIR3183	1	1	0.957387
chr17	1101007	1101273	1101140	ENSG00000278794.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.021373
chr17	1155966	1156175	1156070	ENSG00000275997.1	+	processed_pseudogene	KNOWN	RP11-216P6.2	1	1	1.051094
chr17	1181893	1185086	1183489	ENSG00000235361.1	+	antisense	KNOWN	AC016292.1	1	3	0.901515
chr17	1241939	1254000	1247969	ENSG00000262213.1	-	lincRNA	KNOWN	AC144836.1	1	2	0.866242
chr17	1270559	1271460	1271009	ENSG00000205899.3	+	protein_coding	KNOWN	BHLHA9	1	1	1.133214
chr17	1279663	1300987	1290325	ENSG00000184811.3	+	protein_coding	KNOWN	TUSC5	1	3	1.154593
chr17	1344272	1400378	1372325	ENSG00000108953.16	-	protein_coding	KNOWN	YWHAE	13	7	0.880739
chr17	1352070	1352255	1352162	ENSG00000280408.1	+	TEC	KNOWN	RP11-818O24.2	1	1	0.753995
chr17	1420689	1463162	1441925	ENSG00000167193.7	-	protein_coding	KNOWN	CRK	4	3	1.033201
chr17	1424473	1426484	1425478	ENSG00000262777.1	+	antisense	KNOWN	RP11-818O24.3	2	2	0.968333
chr17	1464098	1492812	1478455	ENSG00000197879.14	-	protein_coding	KNOWN	MYO1C	21	32	1.212836
chr17	1494571	1516888	1505729	ENSG00000132376.19	-	protein_coding	KNOWN	INPP5K	20	14	1.379442
chr17	1516931	1518096	1517513	ENSG00000236618.2	+	antisense	KNOWN	PITPNA-AS1	1	2	1.088066
chr17	1517718	1562816	1540267	ENSG00000174238.14	-	protein_coding	KNOWN	PITPNA	11	12	0.946320
chr17	1569267	1628886	1599076	ENSG00000167703.14	-	protein_coding	KNOWN	SLC43A2	12	15	1.087065
chr17	1604374	1604672	1604523	ENSG00000243704.3	-	misc_RNA	KNOWN	RN7SL105P	1	1	1.261917
chr17	1633858	1645747	1639802	ENSG00000074660.15	-	protein_coding	KNOWN	SCARF1	9	11	1.215224
chr17	1646145	1650077	1648111	ENSG00000167705.11	-	protein_coding	KNOWN	RILP	4	8	1.211115
chr17	1650629	1684882	1667755	ENSG00000174231.16	-	protein_coding	KNOWN	PRPF8	16	43	1.011863
chr17	1684726	1685151	1684938	ENSG00000277597.1	+	antisense	KNOWN	RP11-961A15.3	1	1	1.016773
chr17	1702790	1710438	1706614	ENSG00000185561.9	-	protein_coding	KNOWN	TLCD2	1	4	1.201632
chr17	1711493	1717174	1714333	ENSG00000186594.12	-	lincRNA	KNOWN	MIR22HG	19	4	1.388766
chr17	1713895	1714005	1713950	ENSG00000275595.1	-	miRNA	KNOWN	MIR22	1	1	1.388766
chr17	1716523	1738599	1727561	ENSG00000167716.18	+	protein_coding	KNOWN	WDR81	14	11	1.373014
chr17	1725748	1738585	1732166	ENSG00000262791.1	-	antisense	KNOWN	RP11-961A15.1	1	2	1.361722
chr17	1742836	1755268	1749052	ENSG00000167711.13	+	protein_coding	KNOWN	SERPINF2	5	10	1.260535
chr17	1761959	1777574	1769766	ENSG00000132386.10	+	protein_coding	KNOWN	SERPINF1	12	8	1.108459
chr17	1779485	1830634	1805059	ENSG00000186532.11	-	protein_coding	KNOWN	SMYD4	7	11	0.865494
chr17	1829702	1900082	1864892	ENSG00000132383.11	+	protein_coding	KNOWN	RPA1	7	17	0.850878
chr17	1829841	1829923	1829882	ENSG00000265504.1	-	miRNA	NOVEL	AC130689.1	1	1	0.703721
chr17	1858039	1858446	1858242	ENSG00000108958.4	-	processed_pseudogene	KNOWN	AC016292.3	1	1	0.839412
chr17	1934677	2025345	1980011	ENSG00000185924.6	-	protein_coding	KNOWN	RTN4RL1	1	2	1.009795
chr17	1995614	2003671	1999642	ENSG00000262445.3	+	antisense	KNOWN	CTD-2545H1.2	1	3	1.179455
chr17	2017716	2020706	2019211	ENSG00000228133.2	+	antisense	KNOWN	AC099684.1	2	2	0.772002
chr17	2019952	2023664	2021808	ENSG00000262869.1	-	sense_intronic	KNOWN	CTD-2545H1.1	1	2	0.772002
chr17	2030110	2043430	2036770	ENSG00000108963.17	+	protein_coding	KNOWN	DPH1	17	13	1.259778
chr17	2041936	2043430	2042683	ENSG00000262664.2	+	protein_coding	KNOWN	OVCA2	1	2	1.259778
chr17	2042900	2043425	2043162	ENSG00000262533.1	-	antisense	KNOWN	RP11-667K14.4	1	2	1.259778
chr17	2043475	2044968	2044221	ENSG00000263050.1	-	lincRNA	KNOWN	RP11-667K14.3	1	2	1.259778
chr17	2049908	2050008	2049958	ENSG00000267200.1	-	miRNA	KNOWN	MIR132	1	1	1.272849
chr17	2050271	2050380	2050325	ENSG00000267195.1	-	miRNA	KNOWN	MIR212	1	1	1.405014
chr17	2054154	2063241	2058697	ENSG00000177374.12	+	protein_coding	KNOWN	HIC1	7	3	1.405014
chr17	2059839	2303771	2181805	ENSG00000070366.13	-	protein_coding	KNOWN	SMG6	20	19	0.860715
chr17	2072823	2072956	2072889	ENSG00000280333.1	+	TEC	KNOWN	RP11-667K14.14	1	1	1.079355
chr17	2089681	2101560	2095620	ENSG00000262810.1	+	antisense	KNOWN	RP11-667K14.5	1	2	1.322049
chr17	2101542	2101667	2101604	ENSG00000279040.1	+	TEC	KNOWN	RP11-667K14.13	1	1	1.328725
chr17	2117626	2117772	2117699	ENSG00000279562.1	+	TEC	KNOWN	RP11-667K14.10	1	1	0.861258
chr17	2122342	2122508	2122425	ENSG00000279340.1	-	TEC	KNOWN	RP11-667K14.9	1	1	0.861258
chr17	2127430	2127904	2127667	ENSG00000262402.1	-	processed_pseudogene	KNOWN	RP11-667K14.8	1	1	0.861258
chr17	2199762	2200039	2199900	ENSG00000265777.2	+	misc_RNA	KNOWN	RN7SL624P	1	1	0.824296
chr17	2213697	2214414	2214055	ENSG00000236838.2	+	antisense	KNOWN	AC090617.1	1	2	0.702045
chr17	2215482	2216015	2215748	ENSG00000236457.1	-	sense_intronic	KNOWN	AC130689.5	1	2	0.702045
chr17	2232680	2233610	2233145	ENSG00000225084.1	+	antisense	KNOWN	AL450226.2	1	2	0.739513
chr17	2235713	2236086	2235899	ENSG00000278941.1	-	TEC	KNOWN	SMG6-IT1	1	1	0.739513
chr17	2255719	2256157	2255938	ENSG00000280242.1	+	TEC	KNOWN	RP5-1037N22.2	1	1	0.864581
chr17	2303383	2325260	2314321	ENSG00000167720.12	+	protein_coding	KNOWN	SRR	8	8	0.691168
chr17	2306761	2307715	2307238	ENSG00000262333.1	+	processed_pseudogene	KNOWN	HNRNPA1P16	1	1	0.538454
chr17	2322503	2337507	2330005	ENSG00000167721.10	-	protein_coding	KNOWN	TSR1	5	15	0.895935
chr17	2329016	2329237	2329126	ENSG00000275084.3	-	snoRNA	KNOWN	SNORD91B	2	1	0.757373
chr17	2330180	2330370	2330275	ENSG00000212163.5	-	snoRNA	KNOWN	SNORD91A	2	1	1.034276
chr17	2337498	2381058	2359278	ENSG00000141258.12	+	protein_coding	KNOWN	SGSM2	14	24	1.058172
chr17	2366589	2366791	2366690	ENSG00000274758.1	-	antisense	KNOWN	RP1-59D14.10	1	1	0.917551
chr17	2375061	2379306	2377183	ENSG00000263345.1	-	antisense	KNOWN	RP1-59D14.5	2	4	1.339495
chr17	2384060	2401118	2392589	ENSG00000070444.14	-	protein_coding	KNOWN	MNT	9	6	1.360101
chr17	2384847	2386664	2385755	ENSG00000262456.1	+	antisense	KNOWN	RP1-59D14.1	1	2	1.339495
chr17	2405562	2511891	2458726	ENSG00000127804.12	-	protein_coding	KNOWN	METTL16	10	10	0.785464
chr17	2424179	2424412	2424295	ENSG00000279872.1	-	TEC	KNOWN	RP1-59D14.9	1	1	1.254049
chr17	2460183	2460294	2460238	ENSG00000280280.1	-	TEC	KNOWN	RP1-59D14.8	1	1	0.600279
chr17	2557753	2558094	2557923	ENSG00000243049.3	-	misc_RNA	KNOWN	RN7SL33P	1	1	0.369526
chr17	2586330	2587866	2587098	ENSG00000262953.1	-	processed_pseudogene	KNOWN	EIF4A1P9	1	2	0.495991
chr17	2593210	2685615	2639412	ENSG00000007168.12	+	protein_coding	KNOWN	PAFAH1B1	13	11	0.474132
chr17	2613284	2613944	2613614	ENSG00000262480.2	-	processed_pseudogene	KNOWN	SAMD11P1	1	1	0.531277
chr17	2639297	2642418	2640857	ENSG00000279432.1	+	TEC	KNOWN	RP11-135N5.3	1	1	0.565555
chr17	2680958	2681236	2681097	ENSG00000239884.3	+	misc_RNA	KNOWN	RN7SL608P	1	1	0.424136
chr17	2683305	2685088	2684196	ENSG00000272770.1	-	antisense	KNOWN	RP11-74E22.5	1	2	0.424136
chr17	2688473	2688960	2688716	ENSG00000272911.1	+	lincRNA	KNOWN	RP11-74E22.6	1	2	0.424136
chr17	2689386	2712663	2701024	ENSG00000132361.16	-	protein_coding	KNOWN	CLUH	14	26	1.053773
chr17	2692861	2692919	2692890	ENSG00000273606.1	-	miRNA	KNOWN	MIR6776	1	1	1.059041
chr17	2712309	2712833	2712571	ENSG00000262050.1	+	antisense	KNOWN	RP11-74E22.3	1	2	1.159106
chr17	2720801	2723947	2722374	ENSG00000277200.1	-	lincRNA	KNOWN	RP11-74E22.8	1	1	1.159106
chr17	2724420	2749420	2736920	ENSG00000261963.2	-	unprocessed_pseudogene	KNOWN	RP11-74E22.4	1	4	1.040680
chr17	2748078	2748182	2748130	ENSG00000221200.1	-	miRNA	KNOWN	MIR1253	1	1	1.006660
chr17	2748078	2748182	2748130	ENSG00000272920.1	+	lincRNA	KNOWN	hsa-mir-1253	1	1	1.006660
chr17	2777056	3037739	2907397	ENSG00000132359.13	+	protein_coding	KNOWN	RAP1GAP2	8	26	0.708438
chr17	2962248	2965895	2964071	ENSG00000262884.1	-	antisense	KNOWN	CTD-3060P21.1	1	3	0.747876
chr17	3062669	3063607	3063138	ENSG00000262628.1	-	protein_coding	KNOWN	OR1D5	1	1	0.386826
chr17	3092058	3092996	3092527	ENSG00000184166.1	-	protein_coding	KNOWN	OR1D2	1	1	-0.390401
chr17	3116423	3117366	3116894	ENSG00000142163.7	+	unprocessed_pseudogene	KNOWN	OR1E3	1	1	0.099811
chr17	3126584	3127581	3127082	ENSG00000183024.3	-	protein_coding	KNOWN	OR1G1	1	1	0.099811
chr17	3134969	3177031	3156000	ENSG00000261848.5	-	lincRNA	KNOWN	CTD-2309O5.3	2	4	0.095222
chr17	3153889	3154882	3154385	ENSG00000262085.2	-	unprocessed_pseudogene	KNOWN	OR1P1	1	1	0.083864
chr17	3197519	3198448	3197983	ENSG00000172150.4	+	protein_coding	KNOWN	OR1A2	1	1	-0.089074
chr17	3215621	3216550	3216085	ENSG00000172146.1	+	protein_coding	KNOWN	OR1A1	1	1	-0.162054
chr17	3240676	3241614	3241145	ENSG00000255095.1	+	transcribed_unprocessed_pseudogene	KNOWN	OR1D4	2	1	-0.261645
chr17	3265611	3266541	3266076	ENSG00000262106.1	+	unprocessed_pseudogene	KNOWN	OR1D3P	1	1	0.260921
chr17	3277899	3278974	3278436	ENSG00000221882.2	-	protein_coding	KNOWN	OR3A2	1	1	-0.097486
chr17	3278775	3386339	3332557	ENSG00000262670.5	-	sense_overlapping	KNOWN	RP11-64J4.2	3	5	0.023165
chr17	3291635	3292600	3292117	ENSG00000180090.4	-	protein_coding	KNOWN	OR3A1	2	1	0.049928
chr17	3309986	3311446	3310716	ENSG00000279517.1	+	TEC	KNOWN	RP11-64J4.7	1	1	-0.012564
chr17	3310312	3311189	3310750	ENSG00000180068.8	+	transcribed_unprocessed_pseudogene	KNOWN	OR3A4P	1	1	-0.013125
chr17	3311193	3311892	3311542	ENSG00000272546.1	+	transcribed_unprocessed_pseudogene	KNOWN	OR3A5P	1	1	-0.013125
chr17	3377527	3377602	3377564	ENSG00000267129.1	-	unprocessed_pseudogene	KNOWN	OR1AC1P	1	1	0.365640
chr17	3385930	3386833	3386381	ENSG00000180042.4	+	unprocessed_pseudogene	KNOWN	OR1R1P	1	1	0.365640
chr17	3397104	3398410	3397757	ENSG00000180016.2	-	protein_coding	KNOWN	OR1E1	1	1	-0.005856
chr17	3420568	3421533	3421050	ENSG00000159961.1	+	protein_coding	KNOWN	OR3A3	1	1	-0.066156
chr17	3432870	3433841	3433355	ENSG00000127780.3	-	protein_coding	KNOWN	OR1E2	1	1	0.038221
chr17	3439923	3441844	3440883	ENSG00000280268.1	-	TEC	KNOWN	RP11-147K16.3	1	1	0.038221
chr17	3440019	3513852	3476935	ENSG00000141255.12	-	protein_coding	KNOWN	SPATA22	14	9	0.114478
chr17	3472374	3503419	3487896	ENSG00000108381.10	+	protein_coding	KNOWN	ASPA	4	7	0.315274
chr17	3510502	3557995	3534248	ENSG00000167723.14	-	protein_coding	KNOWN	TRPV3	11	20	0.590717
chr17	3565444	3609411	3587427	ENSG00000196689.11	-	protein_coding	KNOWN	TRPV1	9	17	0.796281
chr17	3577955	3578853	3578404	ENSG00000263338.1	-	sense_intronic	KNOWN	RP11-235E17.3	1	2	0.562883
chr17	3585149	3636249	3610699	ENSG00000262304.2	-	protein_coding	KNOWN	RP11-235E17.2	1	14	0.772353
chr17	3601761	3602272	3602016	ENSG00000261916.1	-	sense_intronic	KNOWN	RP11-235E17.4	1	1	1.014237
chr17	3608262	3636322	3622292	ENSG00000197417.7	-	protein_coding	KNOWN	SHPK	1	7	0.650708
chr17	3619256	3619913	3619584	ENSG00000262248.1	-	processed_pseudogene	KNOWN	RP11-235E17.5	1	2	0.631574
chr17	3636468	3661542	3649005	ENSG00000040531.14	+	protein_coding	KNOWN	CTNS	10	13	0.912377
chr17	3655621	3658092	3656856	ENSG00000262903.1	-	antisense	KNOWN	RP11-235E17.6	1	3	1.265230
chr17	3662896	3668682	3665789	ENSG00000213977.7	-	protein_coding	KNOWN	TAX1BP3	2	4	1.265230
chr17	3663063	3696194	3679628	ENSG00000257950.3	-	protein_coding	KNOWN	P2RX5-TAX1BP3	1	15	1.234730
chr17	3665220	3665702	3665461	ENSG00000240898.1	+	processed_pseudogene	KNOWN	RP11-48B14.1	1	1	1.265230
chr17	3668815	3669668	3669241	ENSG00000127774.6	+	protein_coding	KNOWN	EMC6	2	2	1.265230
chr17	3672199	3696404	3684301	ENSG00000083454.21	-	protein_coding	KNOWN	P2RX5	11	12	1.223103
chr17	3714628	3801243	3757935	ENSG00000083457.11	-	protein_coding	KNOWN	ITGAE	9	31	0.844469
chr17	3721628	3722488	3722058	ENSG00000262692.1	+	antisense	KNOWN	CTD-3195I5.3	1	2	0.584590
chr17	3723903	3726699	3725301	ENSG00000177602.5	+	protein_coding	KNOWN	GSG2	1	1	0.584590
chr17	3729361	3730493	3729927	ENSG00000262358.1	+	antisense	KNOWN	CTD-3195I5.4	1	2	0.672767
chr17	3802165	3846251	3824208	ENSG00000074356.16	-	protein_coding	KNOWN	NCBP3	7	13	0.702077
chr17	3860315	3894891	3877603	ENSG00000004660.14	-	protein_coding	KNOWN	CAMKK1	4	16	1.217975
chr17	3896592	3916500	3906546	ENSG00000108405.3	-	protein_coding	KNOWN	P2RX1	4	12	1.011912
chr17	3923870	3964464	3944167	ENSG00000074370.17	-	protein_coding	KNOWN	ATP2A3	15	23	1.014250
chr17	3977103	3981899	3979501	ENSG00000263312.1	+	lincRNA	KNOWN	RP11-459C13.1	1	2	0.868924
chr17	4004445	4143020	4073732	ENSG00000074755.14	-	protein_coding	KNOWN	ZZEF1	11	55	0.731412
chr17	4056756	4056876	4056816	ENSG00000252456.1	-	rRNA	KNOWN	RNA5SP434	1	1	0.620771
chr17	4143168	4187310	4165239	ENSG00000167740.9	+	protein_coding	KNOWN	CYB5D2	5	4	0.952943
chr17	4163907	4263977	4213942	ENSG00000185722.16	-	protein_coding	KNOWN	ANKFY1	13	25	0.716036
chr17	4163910	4164713	4164311	ENSG00000263165.1	+	antisense	KNOWN	RP11-810M2.2	1	2	1.041527
chr17	4186326	4186424	4186375	ENSG00000251812.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.884080
chr17	4222091	4223828	4222959	ENSG00000263219.1	+	processed_pseudogene	KNOWN	RYKP1	1	1	0.710902
chr17	4267691	4268430	4268060	ENSG00000274363.1	+	lincRNA	KNOWN	RP11-104O19.4	1	1	0.578690
chr17	4269259	4366628	4317943	ENSG00000132388.12	-	protein_coding	KNOWN	UBE2G1	6	7	0.599011
chr17	4301372	4302698	4302035	ENSG00000261868.1	+	processed_pseudogene	KNOWN	MFSD1P1	1	1	0.511076
chr17	4364164	4364453	4364308	ENSG00000263882.2	-	misc_RNA	KNOWN	RN7SL774P	1	1	0.673723
chr17	4433688	4488208	4460948	ENSG00000182557.7	+	protein_coding	KNOWN	SPNS3	6	12	0.921518
chr17	4481966	4486353	4484159	ENSG00000262823.1	-	antisense	KNOWN	RP13-580F15.2	3	2	0.895501
chr17	4497394	4499674	4498534	ENSG00000229782.1	-	antisense	KNOWN	AC118754.4	1	2	1.110254
chr17	4498838	4539035	4518936	ENSG00000183018.8	+	protein_coding	KNOWN	SPNS2	8	13	0.979283
chr17	4538897	4555631	4547264	ENSG00000132382.14	-	protein_coding	KNOWN	MYBBP1A	13	27	1.144421
chr17	4556927	4560818	4558872	ENSG00000167741.10	-	protein_coding	KNOWN	GGT6	6	4	1.423080
chr17	4565752	4571760	4568756	ENSG00000262921.1	+	lincRNA	KNOWN	RP11-141J13.3	1	2	1.237108
chr17	4572206	4572515	4572360	ENSG00000262519.1	+	processed_pseudogene	KNOWN	TXNP4	1	1	0.788600
chr17	4583999	4608319	4596159	ENSG00000188176.11	+	protein_coding	KNOWN	SMTNL2	4	8	0.992991
chr17	4610449	4617650	4614049	ENSG00000261863.1	+	lincRNA	KNOWN	RP11-141J13.5	1	2	0.825477
chr17	4619749	4619852	4619800	ENSG00000222429.1	-	snRNA	KNOWN	RNU6-955P	1	1	0.825477
chr17	4630902	4642294	4636598	ENSG00000161905.12	-	protein_coding	KNOWN	ALOX15	7	15	0.925775
chr17	4669774	4704337	4687055	ENSG00000141456.14	-	protein_coding	KNOWN	PELP1	15	19	0.776637
chr17	4673830	4696831	4685330	ENSG00000235085.3	+	antisense	KNOWN	AC091153.4	2	3	0.796580
chr17	4704230	4705529	4704879	ENSG00000244184.1	+	antisense	KNOWN	RP11-314A20.2	1	2	0.674265
chr17	4704816	4705217	4705016	ENSG00000213939.4	-	processed_pseudogene	KNOWN	RP11-314A20.1	1	1	0.674265
chr17	4710489	4721499	4715994	ENSG00000141480.17	+	protein_coding	KNOWN	ARRB2	20	15	1.292379
chr17	4731428	4733610	4732519	ENSG00000161920.9	+	protein_coding	KNOWN	MED11	3	3	0.749988
chr17	4731756	4732371	4732063	ENSG00000261898.2	-	antisense	KNOWN	RP11-314A20.5	1	2	0.749988
chr17	4733526	4739922	4736724	ENSG00000161921.14	-	protein_coding	KNOWN	CXCL16	5	6	0.749988
chr17	4740015	4746119	4743067	ENSG00000141497.13	+	protein_coding	KNOWN	ZMYND15	6	14	0.749988
chr17	4771884	4783213	4777548	ENSG00000142484.6	+	protein_coding	KNOWN	TM4SF5	2	5	0.873812
chr17	4785285	4786433	4785859	ENSG00000182853.11	-	protein_coding	KNOWN	VMO1	4	3	0.873812
chr17	4787057	4789162	4788109	ENSG00000280254.1	+	TEC	KNOWN	RP11-81A22.4	1	1	0.873812
chr17	4788959	4790390	4789674	ENSG00000182327.7	+	protein_coding	KNOWN	GLTPD2	1	4	0.869113
chr17	4796144	4798503	4797323	ENSG00000142507.9	+	protein_coding	KNOWN	PSMB6	5	6	0.856614
chr17	4801159	4807013	4804086	ENSG00000262165.1	-	lincRNA	KNOWN	RP11-81A22.5	1	2	0.856614
chr17	4807096	4823434	4815265	ENSG00000129219.13	+	protein_coding	KNOWN	PLD2	15	25	1.194376
chr17	4833388	4898061	4865724	ENSG00000141503.15	+	protein_coding	KNOWN	MINK1	13	32	1.061212
chr17	4856757	4857374	4857065	ENSG00000230201.5	-	processed_pseudogene	KNOWN	ATP6V0CP1	1	1	1.024508
chr17	4882975	4883316	4883145	ENSG00000264113.2	+	misc_RNA	KNOWN	RN7SL784P	1	1	1.041846
chr17	4897774	4903074	4900424	ENSG00000108556.7	-	protein_coding	KNOWN	CHRNE	3	12	1.412057
chr17	4899418	4902932	4901175	ENSG00000205710.3	+	protein_coding	KNOWN	C17orf107	2	3	1.412057
chr17	4932297	4935030	4933663	ENSG00000185245.7	+	protein_coding	KNOWN	GP1BA	2	3	1.211731
chr17	4937130	4940251	4938690	ENSG00000108528.13	-	protein_coding	KNOWN	SLC25A11	5	8	1.211731
chr17	4940008	4945222	4942615	ENSG00000108523.15	+	protein_coding	KNOWN	RNF167	16	11	1.211731
chr17	4945652	4949061	4947356	ENSG00000108518.7	-	protein_coding	KNOWN	PFN1	3	3	1.211731
chr17	4948092	4957131	4952611	ENSG00000108515.17	+	protein_coding	KNOWN	ENO3	17	12	1.314004
chr17	4959226	4967872	4963549	ENSG00000091640.7	-	protein_coding	KNOWN	SPAG7	8	7	1.341351
chr17	4967992	4987652	4977822	ENSG00000108509.20	-	protein_coding	KNOWN	CAMTA2	16	23	1.379740
chr17	4967995	4968822	4968408	ENSG00000262429.1	+	antisense	KNOWN	RP5-1050D4.3	1	2	1.341351
chr17	4969702	4969771	4969736	ENSG00000274300.1	-	miRNA	KNOWN	MIR6864	1	1	1.341351
chr17	4970086	4970150	4970118	ENSG00000278517.1	-	miRNA	KNOWN	MIR6865	1	1	1.384104
chr17	4972851	4974681	4973766	ENSG00000234203.1	+	antisense	KNOWN	RP5-1050D4.2	1	2	1.384104
chr17	4986466	4987324	4986895	ENSG00000262678.1	+	antisense	KNOWN	RP5-1050D4.4	1	2	1.384104
chr17	4987706	4988446	4988076	ENSG00000262227.1	+	antisense	KNOWN	RP5-1050D4.5	1	2	1.384104
chr17	4988130	4997610	4992870	ENSG00000196388.8	-	protein_coding	KNOWN	INCA1	4	8	1.263405
chr17	4997948	5028401	5013174	ENSG00000129250.11	+	protein_coding	KNOWN	KIF1C	4	23	1.396129
chr17	5019214	5020093	5019653	ENSG00000227495.1	-	antisense	KNOWN	AC109333.10	1	2	1.502457
chr17	5032600	5052009	5042304	ENSG00000132517.14	-	protein_coding	KNOWN	SLC52A1	5	5	1.314794
chr17	5060356	5062123	5061239	ENSG00000262495.1	+	processed_pseudogene	KNOWN	RP11-46I8.1	1	4	1.341832
chr17	5075678	5078113	5076895	ENSG00000262693.1	-	antisense	KNOWN	RP11-46I8.3	1	2	0.956713
chr17	5078248	5096374	5087311	ENSG00000180787.5	+	protein_coding	KNOWN	ZFP3	1	2	0.916042
chr17	5105541	5123116	5114328	ENSG00000167840.13	-	protein_coding	KNOWN	ZNF232	8	5	0.864564
chr17	5111468	5115004	5113236	ENSG00000234327.7	+	processed_transcript	KNOWN	AC012146.7	4	3	0.872547
chr17	5116438	5175034	5145736	ENSG00000129204.16	+	protein_coding	KNOWN	USP6	6	38	0.754442
chr17	5126740	5127010	5126875	ENSG00000262855.1	-	processed_pseudogene	KNOWN	RP11-46I8.4	1	1	0.872547
chr17	5179536	5191883	5185709	ENSG00000180626.9	-	protein_coding	KNOWN	ZNF594	3	2	0.778638
chr17	5192084	5248069	5220076	ENSG00000261879.5	+	antisense	KNOWN	RP11-333E1.1	3	8	0.942903
chr17	5208961	5234860	5221910	ENSG00000161929.14	-	protein_coding	KNOWN	SCIMP	4	5	0.879065
chr17	5240508	5241543	5241025	ENSG00000263164.1	-	lincRNA	KNOWN	RP11-333E1.2	1	3	1.109914
chr17	5282265	5385812	5334038	ENSG00000029725.16	+	protein_coding	KNOWN	RABEP1	7	18	0.602120
chr17	5360963	5420160	5390561	ENSG00000108559.11	-	protein_coding	KNOWN	NUP88	13	17	0.671027
chr17	5364315	5371626	5367970	ENSG00000263220.1	-	antisense	KNOWN	RP11-420A6.2	1	2	0.711816
chr17	5419641	5432876	5426258	ENSG00000129197.14	+	protein_coding	KNOWN	RPAIN	17	7	0.669500
chr17	5425139	5432876	5429007	ENSG00000263272.1	-	antisense	KNOWN	CTC-524C5.2	1	2	0.685341
chr17	5432777	5448830	5440803	ENSG00000108561.8	-	protein_coding	KNOWN	C1QBP	7	6	0.749760
chr17	5440912	5469060	5454986	ENSG00000005100.12	-	protein_coding	KNOWN	DHX33	5	12	0.727979
chr17	5469092	5470360	5469726	ENSG00000262099.1	+	lincRNA	KNOWN	CTC-524C5.5	1	3	0.734300
chr17	5471251	5486811	5479031	ENSG00000072849.10	-	protein_coding	KNOWN	DERL2	13	7	0.776269
chr17	5486285	5490814	5488549	ENSG00000167842.15	+	protein_coding	KNOWN	MIS12	6	4	0.762486
chr17	5499427	5619424	5559425	ENSG00000091592.15	-	protein_coding	KNOWN	NLRP1	17	18	0.611013
chr17	5512040	5512537	5512288	ENSG00000282980.1	-	processed_pseudogene	KNOWN	RP11-807C20.2	1	1	0.754523
chr17	5514209	5514270	5514239	ENSG00000280489.1	-	snRNA	NOVEL	U7	1	1	0.754523
chr17	5730289	5731085	5730687	ENSG00000262961.1	+	processed_pseudogene	KNOWN	CTB-162E12.1	1	1	-0.096275
chr17	5772234	6124427	5948330	ENSG00000179314.13	+	protein_coding	KNOWN	WSCD1	13	10	0.238368
chr17	6189361	6190541	6189951	ENSG00000262231.1	-	processed_transcript	KNOWN	RP11-960B9.2	2	3	0.153316
chr17	6207163	6207269	6207216	ENSG00000206618.1	+	snRNA	KNOWN	RNU6-1264P	1	1	0.126549
chr17	6296644	6296746	6296695	ENSG00000276283.1	-	miRNA	NOVEL	AC005668.1	1	1	0.290119
chr17	6322413	6323228	6322820	ENSG00000262609.1	-	processed_pseudogene	KNOWN	BTF3P14	1	2	-0.022910
chr17	6393693	6435199	6414446	ENSG00000129221.14	-	protein_coding	KNOWN	AIPL1	12	7	0.399570
chr17	6417685	6418264	6417974	ENSG00000262818.1	+	processed_pseudogene	KNOWN	RP11-636N17.1	1	2	0.245537
chr17	6444415	6451469	6447942	ENSG00000129195.15	+	protein_coding	KNOWN	FAM64A	9	7	0.827258
chr17	6451264	6556494	6503879	ENSG00000091622.15	-	protein_coding	KNOWN	PITPNM3	5	20	0.817224
chr17	6521131	6521412	6521271	ENSG00000274860.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.676954
chr17	6578148	6640927	6609537	ENSG00000198920.9	-	protein_coding	KNOWN	KIAA0753	11	19	0.598063
chr17	6600944	6601051	6600997	ENSG00000200914.1	-	rRNA	KNOWN	RNA5SP435	1	1	0.434384
chr17	6636780	6640316	6638548	ENSG00000282936.1	-	protein_coding	KNOWN	CTC-281F24.5	1	1	0.508916
chr17	6640758	6644541	6642649	ENSG00000129235.10	+	protein_coding	KNOWN	TXNDC17	10	4	0.508916
chr17	6643315	6651634	6647474	ENSG00000108590.10	-	protein_coding	KNOWN	MED31	4	4	0.547145
chr17	6651718	6693202	6672460	ENSG00000256806.4	+	lincRNA	KNOWN	C17orf100	4	2	0.766434
chr17	6651914	6652270	6652092	ENSG00000279257.1	+	protein_coding	KNOWN	C17orf100	1	1	0.703427
chr17	6653464	6655009	6654236	ENSG00000261996.1	-	lincRNA	KNOWN	CTC-281F24.1	1	2	0.703427
chr17	6655440	6655509	6655474	ENSG00000264468.1	-	miRNA	KNOWN	MIR4520-1	1	1	0.703427
chr17	6657034	6693577	6675305	ENSG00000274114.2	+	transcribed_unprocessed_pseudogene	KNOWN	CTC-281F24.3	7	7	0.773872
chr17	6684713	6713567	6699140	ENSG00000141485.16	-	protein_coding	KNOWN	SLC13A5	12	12	0.643758
chr17	6749685	6749978	6749831	ENSG00000262990.1	-	processed_pseudogene	KNOWN	CTC-281F24.2	1	1	0.356369
chr17	6749718	6750188	6749953	ENSG00000244283.1	+	processed_pseudogene	KNOWN	RPL23AP73	1	1	0.451181
chr17	6755447	6775647	6765547	ENSG00000132530.16	+	protein_coding	KNOWN	XAF1	19	7	0.527975
chr17	6772831	6776116	6774473	ENSG00000279296.1	-	TEC	KNOWN	RP11-609D21.3	1	1	0.362639
chr17	6776223	6797101	6786662	ENSG00000177294.6	+	protein_coding	KNOWN	FBXO39	3	4	0.366336
chr17	6789133	6831761	6810447	ENSG00000167858.12	-	protein_coding	KNOWN	TEKT1	5	8	0.368908
chr17	6853861	6954107	6903984	ENSG00000262943.7	+	transcribed_unprocessed_pseudogene	KNOWN	ALOX12P2	12	14	0.360236
chr17	6876635	7012349	6944492	ENSG00000215067.9	-	antisense	KNOWN	ALOX12-AS1	9	5	0.460467
chr17	6927472	6928191	6927831	ENSG00000262503.1	-	processed_pseudogene	KNOWN	RP11-530N7.2	1	1	0.763155
chr17	6954098	6978960	6966529	ENSG00000263316.1	-	antisense	KNOWN	RP11-530N7.3	1	5	0.284971
chr17	6985494	7019414	7002454	ENSG00000267047.1	-	antisense	KNOWN	RP11-589P10.7	1	4	0.792194
chr17	6994642	6995189	6994915	ENSG00000262089.1	-	lincRNA	KNOWN	RP11-589P10.5	1	2	0.755943
chr17	6996065	7010736	7003400	ENSG00000108839.11	+	protein_coding	KNOWN	ALOX12	3	14	0.770352
chr17	7012417	7014532	7013474	ENSG00000219200.11	+	protein_coding	KNOWN	RNASEK	10	4	1.042779
chr17	7012635	7017520	7015077	ENSG00000161939.18	+	protein_coding	KNOWN	RNASEK-C17orf49	4	8	1.042779
chr17	7014495	7017525	7016010	ENSG00000258315.5	+	protein_coding	KNOWN	C17orf49	9	6	1.042779
chr17	7015818	7019659	7017738	ENSG00000267532.3	-	antisense	KNOWN	MIR497HG	2	3	1.042779
chr17	7017615	7017701	7017658	ENSG00000275739.1	-	miRNA	KNOWN	MIR195	1	1	1.042779
chr17	7017911	7018022	7017966	ENSG00000273895.1	-	miRNA	KNOWN	MIR497	1	1	1.042779
chr17	7023020	7030290	7026655	ENSG00000161940.10	+	protein_coding	KNOWN	BCL6B	6	9	1.038152
chr17	7036075	7040121	7038098	ENSG00000174327.6	+	protein_coding	KNOWN	SLC16A13	2	4	0.927181
chr17	7041630	7043923	7042776	ENSG00000174326.11	-	protein_coding	KNOWN	SLC16A11	4	5	0.927181
chr17	7058934	7059204	7059069	ENSG00000262067.1	+	processed_pseudogene	KNOWN	CTD-2545G14.2	1	1	1.020290
chr17	7074537	7080307	7077422	ENSG00000132514.13	-	protein_coding	KNOWN	CLEC10A	6	9	0.830605
chr17	7101322	7115700	7108511	ENSG00000161944.16	-	protein_coding	KNOWN	ASGR2	6	9	0.582970
chr17	7140930	7141592	7141261	ENSG00000213876.4	+	processed_pseudogene	KNOWN	RPL7AP64	1	1	0.565309
chr17	7173431	7179564	7176497	ENSG00000141505.11	-	protein_coding	KNOWN	ASGR1	9	9	0.924264
chr17	7189890	7219702	7204796	ENSG00000132535.18	-	protein_coding	KNOWN	DLG4	10	22	1.250966
chr17	7192295	7192448	7192371	ENSG00000279812.1	-	TEC	KNOWN	CTD-2545G14.4	1	1	1.091992
chr17	7217125	7225273	7221199	ENSG00000072778.19	+	protein_coding	KNOWN	ACADVL	39	21	1.582317
chr17	7223273	7223384	7223328	ENSG00000199053.2	-	miRNA	KNOWN	MIR324	1	1	1.582317
chr17	7225341	7234545	7229943	ENSG00000004975.11	-	protein_coding	KNOWN	DVL2	15	15	1.520164
chr17	7235028	7239722	7237375	ENSG00000040633.12	-	protein_coding	KNOWN	PHF23	13	6	1.456480
chr17	7240014	7242770	7241392	ENSG00000170296.9	-	protein_coding	KNOWN	GABARAP	6	4	1.456480
chr17	7240427	7244635	7242531	ENSG00000262526.2	-	protein_coding	KNOWN	CTD-2545G14.7	1	4	1.456480
chr17	7242200	7243814	7243007	ENSG00000279641.1	+	TEC	KNOWN	CTD-2545G14.6	1	1	1.456480
chr17	7243591	7252491	7248041	ENSG00000175826.11	-	protein_coding	KNOWN	CTDNEP1	12	9	1.456846
chr17	7246829	7262089	7254459	ENSG00000262302.1	-	protein_coding	KNOWN	RP1-4G17.5	1	4	1.457515
chr17	7251416	7259940	7255678	ENSG00000170291.14	+	protein_coding	KNOWN	ELP5	15	9	1.457786
chr17	7251969	7252099	7252034	ENSG00000281419.1	-	miRNA	NOVEL	AC003688.1	1	1	1.457786
chr17	7259903	7263983	7261943	ENSG00000181885.18	-	protein_coding	KNOWN	CLDN7	8	5	1.457786
chr17	7266055	7266166	7266110	ENSG00000202251.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.457786
chr17	7281667	7288257	7284962	ENSG00000181856.14	+	protein_coding	KNOWN	SLC2A4	5	11	1.073009
chr17	7282947	7284071	7283509	ENSG00000263342.1	-	antisense	KNOWN	RP1-4G17.2	1	2	1.073009
chr17	7288252	7294615	7291433	ENSG00000006047.12	-	protein_coding	KNOWN	YBX2	7	9	1.232764
chr17	7306999	7312463	7309731	ENSG00000132507.17	+	protein_coding	KNOWN	EIF5A	11	7	1.323961
chr17	7311324	7315564	7313444	ENSG00000132522.15	-	protein_coding	KNOWN	GPS2	16	11	1.361382
chr17	7312661	7319174	7315917	ENSG00000261915.6	-	protein_coding	KNOWN	RP11-542C16.2	2	19	1.361382
chr17	7315628	7329393	7322510	ENSG00000215041.9	-	protein_coding	KNOWN	NEURL4	14	29	1.361382
chr17	7330452	7335413	7332932	ENSG00000224647.2	+	unitary_pseudogene	KNOWN	AC026954.6	1	7	1.277103
chr17	7336529	7351478	7344003	ENSG00000072818.11	+	protein_coding	KNOWN	ACAP1	12	22	1.321415
chr17	7351889	7354944	7353416	ENSG00000213859.4	+	protein_coding	KNOWN	KCTD11	2	1	1.724987
chr17	7352687	7354944	7353815	ENSG00000263171.1	-	antisense	KNOWN	RP11-542C16.1	1	2	1.724987
chr17	7355123	7357219	7356171	ENSG00000182896.12	+	protein_coding	KNOWN	TMEM95	3	7	1.724987
chr17	7378793	7379060	7378926	ENSG00000281080.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.949387
chr17	7380534	7389774	7385154	ENSG00000174292.12	+	protein_coding	KNOWN	TNK1	8	14	0.949387
chr17	7389727	7394843	7392285	ENSG00000187838.16	-	protein_coding	KNOWN	TMEM256-PLSCR3	14	9	1.311990
chr17	7389734	7404097	7396915	ENSG00000262481.5	-	protein_coding	KNOWN	TMEM256-PLSCR3	4	11	1.325285
chr17	7402975	7404137	7403556	ENSG00000205544.3	-	protein_coding	KNOWN	TMEM256	3	4	1.332351
chr17	7404874	7419860	7412367	ENSG00000169992.9	+	protein_coding	KNOWN	NLGN2	4	8	1.551160
chr17	7420103	7444081	7432092	ENSG00000262880.1	+	processed_transcript	KNOWN	RP11-104H15.7	1	6	1.521828
chr17	7420360	7421632	7420996	ENSG00000181323.7	+	protein_coding	KNOWN	SPEM1	1	3	1.664881
chr17	7425615	7427568	7426591	ENSG00000184560.7	+	protein_coding	KNOWN	C17orf74	2	3	1.664881
chr17	7435443	7437679	7436561	ENSG00000181284.2	+	protein_coding	KNOWN	TMEM102	2	3	1.421299
chr17	7436557	7437523	7437040	ENSG00000262624.1	-	antisense	KNOWN	RP11-104H15.9	1	2	1.421299
chr17	7438273	7444937	7441605	ENSG00000161958.10	+	protein_coding	KNOWN	FGF11	6	5	1.421299
chr17	7439159	7443327	7441243	ENSG00000263301.1	-	antisense	KNOWN	RP11-104H15.8	1	2	1.421299
chr17	7439506	7445966	7442736	ENSG00000272884.1	+	processed_transcript	KNOWN	RP11-104H15.10	1	3	1.421299
chr17	7445061	7457707	7451384	ENSG00000170175.10	+	protein_coding	KNOWN	CHRNB1	8	11	1.223208
chr17	7459366	7484263	7471814	ENSG00000174282.11	-	protein_coding	KNOWN	ZBTB4	2	4	1.179216
chr17	7481332	7483496	7482414	ENSG00000259224.2	+	protein_coding	KNOWN	SLC35G6	1	2	1.241022
chr17	7484366	7514618	7499492	ENSG00000181222.14	+	protein_coding	KNOWN	POLR2A	10	30	1.213880
chr17	7537096	7537196	7537146	ENSG00000201489.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.115375
chr17	7548891	7557890	7553390	ENSG00000239697.10	+	protein_coding	KNOWN	TNFSF12	4	8	1.236645
chr17	7549099	7561601	7555350	ENSG00000248871.1	+	protein_coding	KNOWN	TNFSF12-TNFSF13	1	11	1.243717
chr17	7557820	7558245	7558032	ENSG00000276384.1	-	antisense	KNOWN	RP11-186B7.7	1	1	1.253673
chr17	7558292	7561608	7559950	ENSG00000161955.16	+	protein_coding	KNOWN	TNFSF13	9	7	1.253673
chr17	7561875	7571969	7566922	ENSG00000161956.12	+	protein_coding	KNOWN	SENP3	10	12	1.275986
chr17	7563287	7578715	7571001	ENSG00000277957.1	+	protein_coding	KNOWN	SENP3-EIF4A1	1	21	1.318264
chr17	7572706	7579005	7575855	ENSG00000161960.14	+	protein_coding	KNOWN	EIF4A1	37	11	1.368004
chr17	7572826	7582024	7577425	ENSG00000264772.6	+	processed_transcript	KNOWN	RP11-186B7.4	1	12	1.368004
chr17	7574713	7574847	7574780	ENSG00000209582.1	+	snoRNA	KNOWN	SNORA48	1	1	1.368004
chr17	7576811	7576952	7576881	ENSG00000238917.1	+	snoRNA	KNOWN	SNORD10	1	1	1.368004
chr17	7577955	7578091	7578023	ENSG00000277985.1	+	snoRNA	KNOWN	SNORA67	1	1	1.368004
chr17	7579467	7582113	7580790	ENSG00000129226.13	+	protein_coding	KNOWN	CD68	4	6	1.368004
chr17	7581964	7584072	7583018	ENSG00000233223.2	-	antisense	KNOWN	AC113189.5	4	2	1.368004
chr17	7583529	7592789	7588159	ENSG00000129255.14	+	protein_coding	KNOWN	MPDU1	30	9	1.405523
chr17	7588178	7590170	7589174	ENSG00000129194.7	-	protein_coding	KNOWN	SOX15	3	3	1.378694
chr17	7591230	7614871	7603050	ENSG00000129245.11	-	protein_coding	KNOWN	FXR2	7	17	1.404815
chr17	7613946	7633383	7623664	ENSG00000129214.14	+	protein_coding	KNOWN	SHBG	21	8	1.056559
chr17	7626234	7627876	7627055	ENSG00000141504.11	-	protein_coding	KNOWN	SAT2	14	6	1.066901
chr17	7646627	7657768	7652197	ENSG00000129244.8	+	protein_coding	KNOWN	ATP1B2	3	7	1.279509
chr17	7661779	7687550	7674664	ENSG00000141510.16	-	protein_coding	KNOWN	TP53	28	12	1.163082
chr17	7685260	7686371	7685815	ENSG00000262251.1	-	sense_intronic	KNOWN	RP11-199F11.2	1	1	1.053259
chr17	7686071	7703502	7694786	ENSG00000141499.16	+	protein_coding	KNOWN	WRAP53	10	11	1.290346
chr17	7705202	7711378	7708290	ENSG00000108947.4	+	protein_coding	KNOWN	EFNB3	1	5	1.328029
chr17	7717354	7833744	7775549	ENSG00000183914.14	+	protein_coding	KNOWN	DNAH2	6	86	0.946843
chr17	7754320	7754976	7754648	ENSG00000240480.1	+	transcribed_processed_pseudogene	KNOWN	RPL29P2	2	1	1.091992
chr17	7839904	7854796	7847350	ENSG00000132510.10	+	protein_coding	KNOWN	KDM6B	6	23	1.363701
chr17	7855065	7856099	7855582	ENSG00000167874.6	+	protein_coding	KNOWN	TMEM88	2	2	1.774252
chr17	7856685	7885238	7870961	ENSG00000183011.13	-	protein_coding	KNOWN	NAA38	7	5	1.046704
chr17	7857746	7862282	7860014	ENSG00000182224.11	+	protein_coding	KNOWN	CYB5D1	6	4	1.774252
chr17	7858943	7866083	7862513	ENSG00000280046.1	+	TEC	KNOWN	RP11-1099M24.6	1	1	1.774252
chr17	7884806	7912760	7898783	ENSG00000170004.16	+	protein_coding	KNOWN	CHD3	17	40	1.013292
chr17	7906122	7906260	7906191	ENSG00000252835.1	+	scaRNA	KNOWN	SCARNA21	1	1	1.130466
chr17	7913324	7915953	7914638	ENSG00000179859.7	-	antisense	KNOWN	AC025335.1	1	2	1.297217
chr17	7920952	7921254	7921103	ENSG00000281523.1	+	protein_coding	KNOWN	AC104581.1	1	2	1.297217
chr17	7921859	7929803	7925831	ENSG00000170049.9	-	protein_coding	KNOWN	KCNAB3	6	15	1.297217
chr17	7925931	7930622	7928276	ENSG00000262730.1	-	protein_coding	KNOWN	RP11-1099M24.7	1	6	1.273387
chr17	7930345	7932123	7931234	ENSG00000170043.11	-	protein_coding	KNOWN	TRAPPC1	7	5	1.117788
chr17	7932101	7949918	7941009	ENSG00000170037.13	+	protein_coding	KNOWN	CNTROB	15	19	1.117788
chr17	7954868	7955622	7955245	ENSG00000262492.1	+	processed_pseudogene	KNOWN	RP11-1099M24.8	1	2	0.979751
chr17	8002594	8020339	8011466	ENSG00000132518.6	+	protein_coding	KNOWN	GUCY2D	2	20	1.013134
chr17	8013327	8016378	8014852	ENSG00000279174.1	-	TEC	KNOWN	RP11-1099M24.9	1	1	1.143831
chr17	8039017	8049134	8044075	ENSG00000179593.15	+	protein_coding	KNOWN	ALOX15B	5	14	0.968760
chr17	8056225	8057621	8056923	ENSG00000263427.1	-	lincRNA	KNOWN	RP11-599B13.3	1	2	0.785330
chr17	8063936	8072533	8068234	ENSG00000275011.1	+	unprocessed_pseudogene	KNOWN	RP11-599B13.9	1	9	0.967583
chr17	8072636	8087703	8080169	ENSG00000179477.9	-	protein_coding	KNOWN	ALOX12B	4	15	1.403652
chr17	8079482	8081565	8080523	ENSG00000214999.3	+	antisense	KNOWN	AC129492.6	1	2	1.403652
chr17	8088056	8088147	8088101	ENSG00000264005.1	+	miRNA	KNOWN	MIR4314	1	1	1.403652
chr17	8095900	8119047	8107473	ENSG00000179148.9	-	protein_coding	KNOWN	ALOXE3	4	16	0.869624
chr17	8120590	8124092	8122341	ENSG00000179111.8	-	protein_coding	KNOWN	HES7	3	5	0.988898
chr17	8140472	8156506	8148489	ENSG00000179094.13	-	protein_coding	KNOWN	PER1	19	23	1.092695
chr17	8144994	8145071	8145032	ENSG00000278027.1	-	miRNA	KNOWN	MIR6883	1	1	0.868320
chr17	8150816	8162975	8156895	ENSG00000263620.1	-	protein_coding	KNOWN	RP11-599B13.6	1	5	1.421206
chr17	8159149	8163546	8161347	ENSG00000220205.8	-	protein_coding	KNOWN	VAMP2	4	5	1.421206
chr17	8173237	8176399	8174818	ENSG00000179029.14	-	protein_coding	KNOWN	TMEM107	9	5	1.023279
chr17	8173454	8173587	8173520	ENSG00000200463.1	-	snoRNA	KNOWN	SNORD118	1	1	1.023279
chr17	8176812	8182812	8179812	ENSG00000266824.1	+	lincRNA	KNOWN	RP11-599B13.7	1	3	1.023279
chr17	8188333	8190907	8189620	ENSG00000196544.7	-	protein_coding	KNOWN	BORCS6	1	1	1.075569
chr17	8188933	8189688	8189310	ENSG00000279152.1	+	protein_coding	KNOWN	AC129492.1	1	1	1.023279
chr17	8199123	8199437	8199280	ENSG00000271002.1	-	processed_pseudogene	KNOWN	RP11-599B13.8	1	1	1.171512
chr17	8204733	8210600	8207666	ENSG00000178999.12	-	protein_coding	KNOWN	AURKB	14	9	1.151066
chr17	8220642	8224043	8222342	ENSG00000178977.3	-	lincRNA	KNOWN	LINC00324	1	3	0.971915
chr17	8224821	8248044	8236432	ENSG00000178971.13	-	protein_coding	KNOWN	CTC1	13	23	1.383870
chr17	8247618	8270491	8259054	ENSG00000178921.13	+	protein_coding	KNOWN	PFAS	12	28	1.042925
chr17	8277763	8278436	8278099	ENSG00000269947.1	+	lincRNA	KNOWN	RP11-849F2.9	1	1	1.141980
chr17	8287763	8295343	8291553	ENSG00000125434.10	-	protein_coding	KNOWN	SLC25A35	7	8	0.779294
chr17	8288497	8290092	8289294	ENSG00000108961.13	+	protein_coding	KNOWN	RANGRF	6	5	1.111985
chr17	8296505	8297216	8296860	ENSG00000271029.1	-	processed_pseudogene	KNOWN	RP11-849F2.10	1	2	0.627542
chr17	8310241	8322516	8316378	ENSG00000198844.10	+	protein_coding	KNOWN	ARHGEF15	8	16	0.976111
chr17	8318088	8318712	8318400	ENSG00000226871.1	-	antisense	KNOWN	AC135178.7	1	2	0.976111
chr17	8329583	8329719	8329651	ENSG00000212206.1	+	snoRNA	NOVEL	SNORA69	1	1	0.976111
chr17	8337697	8338758	8338227	ENSG00000266279.1	+	lincRNA	KNOWN	RP11-849F2.4	1	2	0.937106
chr17	8339864	8346046	8342955	ENSG00000184650.9	+	protein_coding	KNOWN	ODF4	2	3	0.937106
chr17	8365563	8381328	8373445	ENSG00000265749.5	+	antisense	KNOWN	RP11-849F2.5	4	3	0.795169
chr17	8368637	8376711	8372674	ENSG00000184619.3	-	protein_coding	KNOWN	KRBA2	2	2	0.766169
chr17	8368638	8383187	8375912	ENSG00000263809.1	-	protein_coding	KNOWN	RP11-849F2.7	1	6	0.746831
chr17	8377520	8383213	8380366	ENSG00000161970.12	-	protein_coding	KNOWN	RPL26	13	4	0.722758
chr17	8390704	8397826	8394265	ENSG00000189051.5	-	protein_coding	KNOWN	RNF222	2	3	0.900693
chr17	8413131	8490411	8451771	ENSG00000166579.15	+	protein_coding	KNOWN	NDEL1	19	10	0.558356
chr17	8474205	8630761	8552483	ENSG00000133026.12	-	protein_coding	KNOWN	MYH10	11	43	0.413924
chr17	8511125	8511188	8511156	ENSG00000252363.1	+	snRNA	KNOWN	RNU7-43P	1	1	0.449544
chr17	8560471	8560962	8560716	ENSG00000270606.1	+	processed_pseudogene	KNOWN	RP11-713H12.2	1	1	0.413920
chr17	8561230	8561576	8561403	ENSG00000244604.1	+	processed_pseudogene	KNOWN	RP11-713H12.1	1	1	0.413920
chr17	8729934	8745219	8737576	ENSG00000161973.10	-	protein_coding	KNOWN	CCDC42	3	7	0.374416
chr17	8753106	8758559	8755832	ENSG00000183318.11	-	protein_coding	KNOWN	SPDYE4	3	6	0.436173
chr17	8797162	8799349	8798255	ENSG00000185156.5	-	protein_coding	KNOWN	MFSD6L	1	1	0.421614
chr17	8802723	8867677	8835200	ENSG00000276231.4	-	protein_coding	KNOWN	PIK3R6	4	20	0.147226
chr17	8878911	8965712	8922311	ENSG00000141506.13	-	protein_coding	KNOWN	PIK3R5	20	19	0.089756
chr17	8965896	8967070	8966483	ENSG00000266389.1	+	lincRNA	KNOWN	CTB-41I6.1	1	2	0.233348
chr17	8967523	8976995	8972259	ENSG00000265975.1	+	lincRNA	KNOWN	CTB-41I6.2	1	2	0.192838
chr17	9021542	9244000	9132771	ENSG00000065320.8	+	protein_coding	KNOWN	NTN1	2	7	0.235851
chr17	9171068	9179118	9175093	ENSG00000262966.2	-	antisense	KNOWN	RP11-85B7.2	1	4	0.494090
chr17	9244666	9244897	9244781	ENSG00000273816.1	-	lincRNA	KNOWN	RP11-85B7.5	1	1	0.698171
chr17	9250471	9576591	9413531	ENSG00000170310.14	-	protein_coding	KNOWN	STX8	12	8	0.282226
chr17	9283174	9305651	9294412	ENSG00000263708.2	+	antisense	KNOWN	RP11-85B7.4	1	2	0.187371
chr17	9452197	9470014	9461105	ENSG00000225751.2	+	antisense	KNOWN	AC087501.1	1	5	0.229715
chr17	9464742	9467422	9466082	ENSG00000262815.1	+	antisense	KNOWN	RP11-565F19.4	1	2	0.229495
chr17	9547298	9548541	9547919	ENSG00000263051.1	+	antisense	KNOWN	RP11-565F19.3	1	2	0.167719
chr17	9553323	9555696	9554509	ENSG00000271851.1	-	sense_intronic	KNOWN	RP11-565F19.2	1	1	0.245615
chr17	9576627	9643459	9610043	ENSG00000166596.14	+	protein_coding	KNOWN	CFAP52	10	15	0.159887
chr17	9589902	9590482	9590192	ENSG00000241654.1	-	processed_pseudogene	KNOWN	RPL19P18	1	1	-0.010373
chr17	9638768	9645325	9642046	ENSG00000265349.1	-	antisense	KNOWN	RP11-55L4.2	1	2	0.049681
chr17	9644698	9729691	9687194	ENSG00000154914.16	+	protein_coding	KNOWN	USP43	6	15	0.170236
chr17	9647020	9647660	9647340	ENSG00000262296.1	-	antisense	KNOWN	RP11-55L4.1	1	2	0.049681
chr17	9764188	9805073	9784630	ENSG00000282882.1	+	lincRNA	KNOWN	RP11-477N12.6	1	4	0.125693
chr17	9771434	9791297	9781365	ENSG00000184544.11	-	protein_coding	KNOWN	DHRS7C	3	6	0.174992
chr17	9791227	9808855	9800041	ENSG00000278944.1	-	processed_transcript	KNOWN	RP11-477N12.4	1	3	0.144733
chr17	9802386	9822071	9812228	ENSG00000214978.7	-	protein_coding	KNOWN	GSG1L2	1	5	0.309814
chr17	9805443	9811047	9808245	ENSG00000283025.1	+	antisense	KNOWN	RP11-477N12.5	1	3	0.195073
chr17	9822206	9892102	9857154	ENSG00000065325.12	+	protein_coding	KNOWN	GLP2R	4	13	0.162733
chr17	9852748	9853306	9853027	ENSG00000265593.1	-	processed_pseudogene	KNOWN	NPM1P45	1	1	0.032491
chr17	9896320	9905621	9900970	ENSG00000109047.7	-	protein_coding	KNOWN	RCVRN	2	3	0.132634
chr17	9910609	10198551	10054580	ENSG00000007237.18	-	protein_coding	KNOWN	GAS7	19	15	0.448562
chr17	10005113	10005260	10005186	ENSG00000280845.1	+	sRNA	NOVEL	Clostridiales-1	1	1	0.521805
chr17	10070890	10071004	10070947	ENSG00000221486.1	+	miRNA	NOVEL	AC000003.1	1	1	0.499761
chr17	10258762	10259232	10258997	ENSG00000242692.1	+	processed_pseudogene	KNOWN	RPS27AP1	1	1	0.062845
chr17	10291820	10317926	10304873	ENSG00000273388.1	+	antisense	KNOWN	RP11-401O9.4	1	2	0.145239
chr17	10298084	10373130	10335607	ENSG00000006788.12	-	protein_coding	KNOWN	MYH13	3	41	0.265065
chr17	10320392	10341458	10330925	ENSG00000264067.1	+	antisense	KNOWN	RP11-401O9.3	1	3	0.405247
chr17	10383132	10537862	10460497	ENSG00000272736.5	+	antisense	KNOWN	RP11-799N11.1	2	4	-0.146073
chr17	10383144	10623886	10503515	ENSG00000272975.1	+	antisense	KNOWN	MYHAS	1	11	-0.060116
chr17	10390322	10421950	10406136	ENSG00000133020.4	-	protein_coding	KNOWN	MYH8	1	40	-0.251281
chr17	10443290	10469559	10456424	ENSG00000264424.1	-	protein_coding	KNOWN	MYH4	1	40	-0.232940
chr17	10492307	10518543	10505425	ENSG00000109061.9	-	protein_coding	KNOWN	MYH1	1	40	-0.043797
chr17	10521148	10549957	10535552	ENSG00000125414.18	-	protein_coding	KNOWN	MYH2	6	40	-0.039052
chr17	10579040	10623036	10601038	ENSG00000214970.8	+	antisense	KNOWN	CTC-297N7.7	4	5	0.126034
chr17	10628526	10657309	10642917	ENSG00000109063.14	-	protein_coding	KNOWN	MYH3	5	41	0.304778
chr17	10658542	10659082	10658812	ENSG00000261433.1	-	lincRNA	KNOWN	CTC-297N7.1	1	1	0.476656
chr17	10672474	10698375	10685424	ENSG00000133028.10	-	protein_coding	KNOWN	SCO1	5	6	0.433976
chr17	10680734	10683988	10682361	ENSG00000263388.1	+	antisense	KNOWN	CTC-297N7.10	1	2	0.524002
chr17	10697594	10711233	10704413	ENSG00000170222.11	+	protein_coding	KNOWN	ADPRM	4	4	0.246927
chr17	10699015	10730316	10714665	ENSG00000187824.8	-	protein_coding	KNOWN	TMEM220	6	6	0.258016
chr17	10716002	10716511	10716256	ENSG00000264176.1	-	transcribed_processed_pseudogene	KNOWN	MAGOH2P	2	1	0.260115
chr17	10729777	10815164	10772470	ENSG00000263400.6	+	antisense	KNOWN	TMEM220-AS1	7	5	0.259476
chr17	10741267	10769016	10755141	ENSG00000264016.2	-	lincRNA	KNOWN	CTC-297N7.9	2	2	0.560997
chr17	10745553	10746543	10746048	ENSG00000240813.2	-	processed_pseudogene	KNOWN	RP11-963H4.2	1	2	0.555299
chr17	10792059	10794985	10793522	ENSG00000266114.1	+	lincRNA	KNOWN	RP11-963H4.5	1	3	0.021219
chr17	10794913	10804099	10799506	ENSG00000263429.3	-	lincRNA	KNOWN	LINC00675	2	2	0.021219
chr17	10821901	10822243	10822072	ENSG00000279542.1	-	TEC	KNOWN	RP11-963H4.6	1	1	0.175650
chr17	10822475	10838445	10830460	ENSG00000233670.6	-	protein_coding	KNOWN	PIRT	1	2	0.238235
chr17	10849541	10880895	10865218	ENSG00000263508.5	+	lincRNA	KNOWN	RP11-963H4.3	2	2	0.191558
chr17	10857899	10858004	10857951	ENSG00000207242.1	-	snRNA	KNOWN	RNU6-1065P	1	1	0.336530
chr17	10860535	10861462	10860998	ENSG00000244753.2	-	processed_pseudogene	KNOWN	RPL15P21	1	2	0.336530
chr17	10995707	10995773	10995740	ENSG00000281891.1	-	miRNA	NOVEL	AC005284.2	1	1	0.123527
chr17	11053788	11053935	11053861	ENSG00000221701.1	+	miRNA	NOVEL	AC005284.1	1	1	-0.171043
chr17	11157455	11157747	11157601	ENSG00000243346.3	+	misc_RNA	KNOWN	RN7SL601P	1	1	-0.205689
chr17	11241263	11564063	11402663	ENSG00000188803.14	+	protein_coding	KNOWN	SHISA6	4	6	-0.007929
chr17	11267305	11267379	11267342	ENSG00000253002.1	-	miRNA	NOVEL	AC005725.1	1	1	0.268541
chr17	11288205	11290811	11289508	ENSG00000264727.1	+	lincRNA	KNOWN	RP11-680C21.1	1	1	0.008427
chr17	11598431	11969748	11784089	ENSG00000007174.17	+	protein_coding	KNOWN	DNAH9	15	69	-0.056552
chr17	11741376	11741464	11741420	ENSG00000263623.1	-	miRNA	NOVEL	AC005701.1	1	1	-0.245043
chr17	11874932	11875828	11875380	ENSG00000263684.1	-	antisense	KNOWN	RP11-628O18.1	1	2	-0.332324
chr17	11953889	11977594	11965741	ENSG00000266368.1	-	antisense	KNOWN	RP11-1096G20.5	1	2	-0.028233
chr17	11977439	11997510	11987474	ENSG00000154957.13	-	protein_coding	KNOWN	ZNF18	7	9	-0.012862
chr17	11998353	12021508	12009930	ENSG00000241185.2	-	transcribed_processed_pseudogene	KNOWN	RPL21P122	3	4	0.136568
chr17	12020824	12143830	12082327	ENSG00000065559.14	+	protein_coding	KNOWN	MAP2K4	15	12	-0.063238
chr17	12036496	12036637	12036566	ENSG00000252707.1	-	snRNA	KNOWN	RNU11-2P	1	1	0.026403
chr17	12081899	12081996	12081947	ENSG00000266297.1	+	miRNA	KNOWN	MIR744	1	1	-0.145337
chr17	12115547	12115885	12115716	ENSG00000263648.1	+	processed_pseudogene	KNOWN	RP11-471L13.3	1	1	-0.305156
chr17	12201600	12215267	12208433	ENSG00000265400.1	+	lincRNA	KNOWN	RP11-471L13.2	1	4	0.087119
chr17	12549782	12642854	12596318	ENSG00000179136.6	+	lincRNA	KNOWN	LINC00670	3	4	0.161884
chr17	12665890	12768949	12717419	ENSG00000141052.17	+	protein_coding	KNOWN	MYOCD	5	14	0.135478
chr17	12671862	12706135	12688998	ENSG00000227274.1	-	antisense	KNOWN	AC005358.3	1	3	0.102080
chr17	12760140	12790242	12775191	ENSG00000265489.1	-	antisense	KNOWN	RP11-1090M7.1	1	2	0.222706
chr17	12789539	12991643	12890591	ENSG00000006740.16	+	protein_coding	KNOWN	ARHGAP44	12	22	-0.083901
chr17	12917268	12917342	12917305	ENSG00000265503.1	-	miRNA	KNOWN	MIR1269B	1	1	0.101707
chr17	12973033	12973834	12973433	ENSG00000280168.1	-	TEC	KNOWN	RP11-1090M7.3	1	1	0.061131
chr17	12982613	12983002	12982807	ENSG00000277621.1	-	antisense	KNOWN	RP11-597M12.2	1	1	0.061131
chr17	12990149	12990610	12990379	ENSG00000263707.1	-	antisense	KNOWN	RP11-597M12.1	1	2	0.494956
chr17	12992391	13018187	13005289	ENSG00000006744.18	-	protein_coding	KNOWN	ELAC2	21	24	0.404838
chr17	13095908	13100928	13098418	ENSG00000273098.1	+	lincRNA	KNOWN	RP11-488L1.1	1	2	0.298992
chr17	13299184	13306760	13302972	ENSG00000234634.1	-	lincRNA	KNOWN	AC003664.1	1	5	-0.350319
chr17	13495689	13601927	13548808	ENSG00000153976.2	-	protein_coding	KNOWN	HS3ST3A1	2	2	0.296683
chr17	13500254	13500328	13500291	ENSG00000266115.1	-	miRNA	NOVEL	AC005375.1	1	1	0.273512
chr17	13543529	13543646	13543587	ENSG00000221698.1	-	miRNA	KNOWN	MIR548H3	1	1	0.115075
chr17	13756478	14069495	13912986	ENSG00000236088.9	-	processed_transcript	KNOWN	COX10-AS1	7	5	0.085873
chr17	13909231	13911212	13910221	ENSG00000265494.1	+	lincRNA	KNOWN	RP11-131K5.2	1	1	0.047765
chr17	13932720	13940594	13936657	ENSG00000233852.1	-	lincRNA	KNOWN	AC005304.1	1	3	0.204258
chr17	13957748	13966952	13962350	ENSG00000266744.1	-	lincRNA	KNOWN	RP11-131K5.1	1	3	-0.387618
chr17	14024514	14025488	14025001	ENSG00000141028.6	+	unprocessed_pseudogene	KNOWN	CDRT15P1	1	3	0.123019
chr17	14069496	14208677	14139086	ENSG00000006695.10	+	protein_coding	KNOWN	COX10	4	7	-0.044608
chr17	14177131	14177310	14177220	ENSG00000252305.1	+	snoRNA	NOVEL	SNORA74	1	1	0.298992
chr17	14210488	14217922	14214205	ENSG00000231595.1	+	lincRNA	KNOWN	AC005224.2	1	3	0.407194
chr17	14235673	14236862	14236267	ENSG00000223510.6	-	protein_coding	KNOWN	CDRT15	2	3	0.403700
chr17	14295512	14297600	14296556	ENSG00000262786.1	-	lincRNA	KNOWN	RP11-214O1.1	1	2	-0.046288
chr17	14301083	14349404	14325243	ENSG00000125430.8	+	protein_coding	KNOWN	HS3ST3B1	2	3	0.180670
chr17	14303854	14305505	14304679	ENSG00000266709.1	+	lincRNA	KNOWN	RP11-214O1.2	1	1	-0.046288
chr17	14327335	14329474	14328404	ENSG00000266378.1	+	lincRNA	KNOWN	RP11-214O1.3	1	1	0.495570
chr17	14374139	14421026	14397582	ENSG00000230647.1	+	lincRNA	KNOWN	AC022816.2	1	5	-0.236133
chr17	14705076	14705534	14705305	ENSG00000230897.1	-	processed_pseudogene	KNOWN	RPS18P12	1	1	-0.080324
chr17	14725729	14729686	14727707	ENSG00000226130.1	+	lincRNA	KNOWN	AC013248.2	1	2	-0.221425
chr17	14767583	14780203	14773893	ENSG00000205325.1	-	lincRNA	KNOWN	AC005863.1	1	2	-0.068903
chr17	14834638	14900554	14867596	ENSG00000238212.2	+	lincRNA	KNOWN	AC005863.2	1	4	-0.083170
chr17	14947741	14948198	14947969	ENSG00000226156.1	-	processed_pseudogene	KNOWN	RPL23AP76	1	1	-0.068473
chr17	15014805	15052276	15033540	ENSG00000232058.1	+	lincRNA	KNOWN	AC005772.2	1	2	0.031367
chr17	15030975	15031957	15031466	ENSG00000259944.1	+	lincRNA	KNOWN	CDRT7	1	3	-0.144243
chr17	15105237	15106187	15105712	ENSG00000265163.1	-	lincRNA	KNOWN	CDRT8	1	2	-0.161127
chr17	15229777	15265326	15247551	ENSG00000109099.13	-	protein_coding	KNOWN	PMP22	9	6	0.282539
chr17	15251627	15251696	15251661	ENSG00000265110.1	-	miRNA	KNOWN	MIR4731	1	1	0.629258
chr17	15260513	15261841	15261177	ENSG00000279660.1	+	TEC	KNOWN	RP11-849N15.3	1	1	0.629258
chr17	15261015	15265707	15263361	ENSG00000265445.1	+	antisense	KNOWN	RP11-849N15.1	1	2	0.629258
chr17	15267461	15272290	15269875	ENSG00000230971.1	-	lincRNA	KNOWN	AC005703.3	1	2	0.612058
chr17	15276562	15279477	15278019	ENSG00000237377.2	-	lincRNA	KNOWN	AC005703.2	1	3	0.593003
chr17	15303811	15341641	15322726	ENSG00000125409.12	-	protein_coding	KNOWN	TEKT3	10	9	0.194241
chr17	15311345	15311451	15311398	ENSG00000200437.1	+	snRNA	KNOWN	RNU6-799P	1	1	0.366999
chr17	15365323	15365877	15365600	ENSG00000279567.1	+	TEC	KNOWN	RP11-849N15.5	1	1	0.208637
chr17	15379864	15417878	15398871	ENSG00000266667.1	-	lincRNA	KNOWN	RP11-849N15.4	1	4	0.223678
chr17	15408384	15408688	15408536	ENSG00000239888.3	+	misc_RNA	KNOWN	RN7SL792P	1	1	0.229495
chr17	15436015	15503608	15469811	ENSG00000239704.10	-	protein_coding	KNOWN	CDRT4	4	4	0.442072
chr17	15436021	15563561	15499791	ENSG00000259024.6	-	protein_coding	KNOWN	TVP23C-CDRT4	4	7	0.388934
chr17	15443639	15444191	15443915	ENSG00000234324.1	+	processed_pseudogene	KNOWN	RPL9P2	1	1	0.404968
chr17	15502264	15563595	15532929	ENSG00000175106.16	-	protein_coding	KNOWN	TVP23C	10	7	0.330102
chr17	15506866	15507354	15507110	ENSG00000223878.1	+	processed_pseudogene	KNOWN	AC005517.3	1	1	0.382148
chr17	15530773	15531089	15530931	ENSG00000266538.1	-	lincRNA	KNOWN	RP11-385D13.3	1	1	0.203885
chr17	15565483	15619704	15592593	ENSG00000241322.8	-	protein_coding	KNOWN	CDRT1	9	12	0.236977
chr17	15571491	15651653	15611572	ENSG00000251537.4	-	protein_coding	KNOWN	RP11-385D13.1	1	17	0.301437
chr17	15574019	15574198	15574108	ENSG00000252129.1	+	snoRNA	NOVEL	SNORA74	1	1	0.260115
chr17	15588852	15589084	15588968	ENSG00000223544.1	+	unprocessed_pseudogene	KNOWN	AC005838.2	1	1	0.260115
chr17	15627960	15684311	15656135	ENSG00000221926.11	-	protein_coding	KNOWN	TRIM16	25	11	0.376449
chr17	15651590	15654489	15653039	ENSG00000266261.1	+	antisense	KNOWN	RP11-640I15.1	1	2	0.566235
chr17	15675476	15675643	15675559	ENSG00000108452.1	+	unprocessed_pseudogene	KNOWN	ZNF29P	1	1	0.120420
chr17	15699577	15720787	15710182	ENSG00000187607.15	+	protein_coding	KNOWN	ZNF286A	21	6	0.360262
chr17	15699692	15744783	15722237	ENSG00000255104.7	+	protein_coding	KNOWN	TBC1D26	5	17	0.371116
chr17	15704232	15704900	15704566	ENSG00000233966.1	-	processed_pseudogene	KNOWN	UBE2SP1	1	1	0.645793
chr17	15732247	15749192	15740719	ENSG00000214946.13	+	protein_coding	KNOWN	TBC1D26	12	16	0.567465
chr17	15735023	15749192	15742107	ENSG00000233002.2	-	antisense	KNOWN	AC005324.6	3	4	0.567465
chr17	15748703	15749315	15749009	ENSG00000267227.1	-	processed_pseudogene	KNOWN	RP11-640I15.2	1	1	0.567465
chr17	15761614	15763769	15762691	ENSG00000233193.1	-	lincRNA	KNOWN	AC005324.7	1	2	0.249273
chr17	15764703	15765664	15765183	ENSG00000227255.1	+	unprocessed_pseudogene	KNOWN	CDRT15P2	1	3	0.249273
chr17	15768717	15771426	15770071	ENSG00000235430.1	-	processed_pseudogene	KNOWN	ZSWIM5P1	1	2	0.324495
chr17	15782341	15782455	15782398	ENSG00000251829.1	+	rRNA	KNOWN	RNA5SP436	1	1	0.392073
chr17	15783288	15784307	15783797	ENSG00000227018.1	+	processed_pseudogene	KNOWN	IL6STP1	1	1	0.392073
chr17	15786618	15787575	15787096	ENSG00000179277.9	+	processed_pseudogene	KNOWN	MEIS3P1	1	1	0.392073
chr17	15787787	15788205	15787996	ENSG00000265519.1	-	lincRNA	KNOWN	CTD-3157E16.1	1	2	0.392073
chr17	15789016	15789705	15789360	ENSG00000276855.1	+	lincRNA	KNOWN	CTD-3157E16.2	1	1	0.392073
chr17	15792862	15793045	15792953	ENSG00000233090.1	+	unprocessed_pseudogene	KNOWN	AC015922.7	1	1	0.221275
chr17	15806241	15817742	15811991	ENSG00000237057.2	-	lincRNA	KNOWN	AC015922.6	1	3	0.299962
chr17	15829369	15864153	15846761	ENSG00000227790.6	+	transcribed_unprocessed_pseudogene	KNOWN	AC015922.5	2	8	0.286223
chr17	15944917	15975746	15960331	ENSG00000170425.3	+	protein_coding	KNOWN	ADORA2B	2	2	0.610186
chr17	15976560	15999717	15988138	ENSG00000214941.7	-	protein_coding	KNOWN	ZSWIM7	18	8	0.422107
chr17	15999380	16045015	16022197	ENSG00000011295.15	+	protein_coding	KNOWN	TTC19	10	10	0.427804
chr17	16023323	16023653	16023488	ENSG00000275413.1	-	antisense	KNOWN	CTC-529I10.1	1	1	0.369101
chr17	16029157	16218185	16123671	ENSG00000141027.20	-	protein_coding	KNOWN	NCOR1	27	46	0.316910
chr17	16040472	16041273	16040872	ENSG00000227782.2	+	antisense	KNOWN	CTC-529I10.2	1	1	0.425729
chr17	16044621	16044961	16044791	ENSG00000243686.2	+	processed_pseudogene	KNOWN	RPLP1P11	1	1	0.425729
chr17	16084042	16084381	16084211	ENSG00000233979.1	+	processed_pseudogene	KNOWN	AC002553.4	1	1	0.091992
chr17	16098704	16098807	16098755	ENSG00000252383.1	+	snRNA	KNOWN	RNU6-314P	1	1	0.523331
chr17	16137768	16137872	16137820	ENSG00000199674.1	-	snRNA	KNOWN	RNU6-862P	1	1	0.121436
chr17	16191832	16192151	16191991	ENSG00000239221.3	+	misc_RNA	KNOWN	RN7SL442P	1	1	0.195085
chr17	16217191	16351797	16284494	ENSG00000108474.16	+	protein_coding	KNOWN	PIGL	17	7	0.529158
chr17	16282014	16282088	16282051	ENSG00000221355.1	+	miRNA	KNOWN	MIR1288	1	1	0.613628
chr17	16342534	16353656	16348095	ENSG00000166582.9	-	protein_coding	KNOWN	CENPV	7	5	0.376484
chr17	16380798	16382745	16381771	ENSG00000170315.13	+	protein_coding	KNOWN	UBB	9	3	0.349790
chr17	16382152	16382669	16382410	ENSG00000265401.1	-	antisense	KNOWN	RP11-138I1.4	1	2	0.349790
chr17	16391434	16391882	16391658	ENSG00000265095.1	+	processed_pseudogene	KNOWN	FTLP12	1	1	0.534836
chr17	16414524	16416689	16415606	ENSG00000264739.1	-	antisense	KNOWN	RP11-138I1.2	1	1	0.725453
chr17	16415542	16437003	16426272	ENSG00000187688.14	+	protein_coding	KNOWN	TRPV2	9	15	0.741379
chr17	16427474	16428719	16428096	ENSG00000239203.1	+	processed_transcript	KNOWN	AC093484.4	1	2	0.725453
chr17	16438822	16478678	16458750	ENSG00000175061.17	+	processed_transcript	KNOWN	LRRC75A-AS1	30	7	0.800445
chr17	16439505	16439576	16439540	ENSG00000277108.1	+	snoRNA	KNOWN	SNORD49B	1	1	0.774252
chr17	16440036	16440106	16440071	ENSG00000277370.1	+	snoRNA	KNOWN	SNORD49A	1	1	0.774252
chr17	16440479	16440952	16440715	ENSG00000266651.1	-	lincRNA	KNOWN	RP11-138I1.3	1	2	0.774252
chr17	16441226	16441298	16441262	ENSG00000277512.1	+	snoRNA	KNOWN	SNORD65	1	1	0.774252
chr17	16441577	16492153	16466865	ENSG00000181350.11	-	protein_coding	KNOWN	LRRC75A	3	4	0.776290
chr17	16551387	16569206	16560296	ENSG00000141040.14	-	protein_coding	KNOWN	ZNF287	6	6	0.189967
chr17	16557985	16559269	16558627	ENSG00000266803.1	-	sense_intronic	KNOWN	RP1-77H15.1	1	2	0.189967
chr17	16616848	16617881	16617364	ENSG00000235554.1	-	processed_pseudogene	KNOWN	AC005822.1	1	1	0.222886
chr17	16620737	16653856	16637296	ENSG00000197566.9	-	protein_coding	KNOWN	ZNF624	5	6	0.120142
chr17	16653904	16654787	16654345	ENSG00000264765.1	+	lincRNA	KNOWN	RP11-92B11.4	1	2	0.019388
chr17	16666107	16667118	16666612	ENSG00000264359.1	-	processed_pseudogene	KNOWN	NEK4P2	1	1	0.019388
chr17	16683438	16684227	16683832	ENSG00000231458.2	+	processed_pseudogene	KNOWN	RNASEH1P2	1	1	0.057226
chr17	16689537	16777881	16733709	ENSG00000170160.16	+	protein_coding	KNOWN	CCDC144A	12	18	-0.015135
chr17	16690261	16804453	16747357	ENSG00000266302.5	+	protein_coding	KNOWN	RP11-219A15.1	2	26	0.046738
chr17	16691798	16691907	16691852	ENSG00000252446.1	+	snRNA	KNOWN	RNU6-405P	1	1	-0.169500
chr17	16710059	16710361	16710210	ENSG00000276088.1	+	misc_RNA	KNOWN	RN7SL620P	1	1	-0.068085
chr17	16745636	16746761	16746198	ENSG00000226478.3	-	processed_pseudogene	KNOWN	UPF3AP1	1	1	-0.109642
chr17	16786489	16804455	16795472	ENSG00000188933.14	+	transcribed_unprocessed_pseudogene	KNOWN	USP32P1	11	9	0.187717
chr17	16787235	16788141	16787688	ENSG00000266129.1	-	processed_pseudogene	KNOWN	SRP68P1	1	2	0.381498
chr17	16788057	16816540	16802298	ENSG00000272815.1	+	processed_transcript	KNOWN	RP11-219A15.4	1	11	0.209102
chr17	16788248	16789234	16788741	ENSG00000264673.1	-	antisense	KNOWN	RP11-92B11.3	1	2	0.381498
chr17	16788901	16789407	16789154	ENSG00000266486.1	+	processed_pseudogene	KNOWN	FAM106CP	1	1	0.381498
chr17	16804627	16805707	16805167	ENSG00000264729.1	+	lincRNA	KNOWN	RP11-219A15.2	1	2	0.140666
chr17	16812447	16812651	16812549	ENSG00000264892.1	+	processed_pseudogene	KNOWN	NOS2P4	1	1	0.367172
chr17	16817983	16822579	16820281	ENSG00000226145.7	-	transcribed_unprocessed_pseudogene	KNOWN	KRT16P6	4	8	0.367172
chr17	16829999	16832830	16831414	ENSG00000227300.12	-	transcribed_unprocessed_pseudogene	KNOWN	KRT16P2	2	8	0.868217
chr17	16840743	16845883	16843313	ENSG00000131885.16	-	transcribed_unprocessed_pseudogene	KNOWN	KRT17P1	5	7	0.868217
chr17	16847635	16852777	16850206	ENSG00000205312.8	-	transcribed_unprocessed_pseudogene	KNOWN	KRT17P4	6	7	0.950133
chr17	16853935	16854309	16854122	ENSG00000229749.1	+	processed_pseudogene	KNOWN	COTL1P1	1	1	1.019842
chr17	16861146	16864223	16862684	ENSG00000283033.1	+	lincRNA	KNOWN	RP11-219A15.5	1	1	1.019842
chr17	16893198	16893429	16893313	ENSG00000265853.1	-	processed_pseudogene	KNOWN	RP1-48J14.1	1	1	0.617083
chr17	16922915	16934839	16928877	ENSG00000128438.10	-	transcribed_unprocessed_pseudogene	KNOWN	TBC1D27	3	14	0.540447
chr17	16929816	16972118	16950967	ENSG00000240505.8	-	protein_coding	KNOWN	TNFRSF13B	7	10	0.583801
chr17	16975999	16981353	16978676	ENSG00000230709.1	-	lincRNA	KNOWN	AC104024.1	1	3	0.144699
chr17	16988329	16990177	16989253	ENSG00000230969.2	+	lincRNA	KNOWN	AC104024.2	1	3	0.203119
chr17	17011914	17014990	17013452	ENSG00000260328.1	-	lincRNA	KNOWN	RP11-416I2.1	1	1	0.944435
chr17	17042545	17217679	17130112	ENSG00000133030.19	+	protein_coding	KNOWN	MPRIP	20	24	0.813629
chr17	17076038	17077752	17076895	ENSG00000225442.2	-	antisense	KNOWN	MPRIP-AS1	1	2	0.716024
chr17	17167946	17185554	17176750	ENSG00000263624.1	-	antisense	KNOWN	RP11-45M22.3	1	2	0.803922
chr17	17170083	17170189	17170136	ENSG00000206859.1	+	snRNA	KNOWN	RNU6-767P	1	1	0.781970
chr17	17178414	17178749	17178581	ENSG00000243370.3	+	misc_RNA	KNOWN	RN7SL775P	1	1	0.781970
chr17	17181504	17183257	17182380	ENSG00000278864.1	+	TEC	KNOWN	RP11-45M22.2	1	1	0.781970
chr17	17200995	17206315	17203655	ENSG00000179598.5	-	protein_coding	KNOWN	PLD6	1	2	0.804415
chr17	17202649	17237185	17219917	ENSG00000264187.1	-	protein_coding	KNOWN	RP11-45M22.4	1	12	0.987270
chr17	17212212	17237188	17224700	ENSG00000154803.12	-	protein_coding	KNOWN	FLCN	10	14	1.034006
chr17	17235433	17236118	17235775	ENSG00000266498.1	-	lincRNA	KNOWN	RP11-45M22.5	1	1	0.952189
chr17	17242010	17242886	17242448	ENSG00000226359.1	+	processed_pseudogene	KNOWN	ACTG1P24	1	1	0.952189
chr17	17242564	17242647	17242605	ENSG00000265109.1	+	miRNA	NOVEL	AC055811.1	1	1	0.952189
chr17	17246820	17281293	17264056	ENSG00000141030.12	-	protein_coding	KNOWN	COPS3	18	12	0.492012
chr17	17303335	17347663	17325499	ENSG00000205309.13	+	protein_coding	KNOWN	NT5M	7	6	0.606205
chr17	17383377	17384012	17383694	ENSG00000215030.5	-	processed_pseudogene	KNOWN	RPL13P12	1	1	0.499535
chr17	17422681	17423704	17423192	ENSG00000227158.1	+	processed_pseudogene	KNOWN	AC073621.2	1	1	0.604285
chr17	17456427	17457259	17456843	ENSG00000230865.1	+	processed_pseudogene	KNOWN	TSEN15P1	1	2	0.610317
chr17	17460444	17460522	17460483	ENSG00000201741.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.610317
chr17	17476986	17493226	17485106	ENSG00000141026.5	+	protein_coding	KNOWN	MED9	5	3	0.357137
chr17	17494437	17496395	17495416	ENSG00000108551.4	-	protein_coding	KNOWN	RASD1	2	2	0.830525
chr17	17505563	17591708	17548635	ENSG00000133027.17	-	protein_coding	KNOWN	PEMT	13	8	0.854634
chr17	17507351	17508308	17507829	ENSG00000265511.1	+	antisense	KNOWN	RP11-524F11.1	1	2	0.830525
chr17	17578631	17578739	17578685	ENSG00000206730.1	+	snRNA	KNOWN	RNU6-468P	1	1	0.846879
chr17	17591428	17610485	17600956	ENSG00000264666.1	+	antisense	KNOWN	RP11-524F11.2	1	2	0.609821
chr17	17616043	17617745	17616894	ENSG00000279200.1	+	TEC	KNOWN	RP11-524F11.3	1	1	0.914283
chr17	17674026	17677688	17675857	ENSG00000223979.2	-	lincRNA	KNOWN	SMCR2	1	4	0.517476
chr17	17675366	17675522	17675444	ENSG00000273948.1	+	misc_RNA	NOVEL	SMCR2_1	1	1	0.517476
chr17	17676211	17676371	17676291	ENSG00000274836.1	+	misc_RNA	NOVEL	SMCR2_2	1	1	0.517476
chr17	17681473	17811453	17746463	ENSG00000108557.17	+	protein_coding	KNOWN	RAI1	6	6	0.948248
chr17	17759154	17770821	17764987	ENSG00000237328.1	-	antisense	KNOWN	RAI1-AS1	1	3	0.939856
chr17	17776686	17779529	17778107	ENSG00000226746.2	-	antisense	KNOWN	SMCR5	1	1	0.825818
chr17	17777781	17779094	17778437	ENSG00000264167.1	+	sense_intronic	KNOWN	RP1-253P7.1	1	2	0.825818
chr17	17810399	17837002	17823700	ENSG00000072310.16	-	protein_coding	KNOWN	SREBF1	23	20	1.162822
chr17	17813480	17813545	17813512	ENSG00000274111.1	-	miRNA	KNOWN	MIR6777	1	1	1.203023
chr17	17813836	17813931	17813883	ENSG00000207839.1	-	miRNA	KNOWN	MIR33B	1	1	1.203023
chr17	17843511	17972422	17907966	ENSG00000175662.17	-	protein_coding	KNOWN	TOM1L2	14	15	0.858167
chr17	17858227	17860041	17859134	ENSG00000197815.4	+	antisense	KNOWN	RP1-253P7.4	1	1	1.340458
chr17	17972813	18016889	17994851	ENSG00000171962.17	+	protein_coding	KNOWN	DRC3	18	14	0.669578
chr17	17977409	18039209	18008309	ENSG00000171953.15	-	protein_coding	KNOWN	ATPAF2	13	8	0.628439
chr17	17981192	17981572	17981382	ENSG00000230273.1	-	processed_pseudogene	KNOWN	AC087163.3	1	1	0.733154
chr17	18001101	18001195	18001148	ENSG00000281749.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.645146
chr17	18010643	18011822	18011232	ENSG00000232344.2	+	processed_pseudogene	KNOWN	AC087163.2	1	2	0.581917
chr17	18026072	18026771	18026421	ENSG00000280198.1	-	TEC	KNOWN	RP11-384M20.1	1	1	0.581917
chr17	18039292	18068404	18053848	ENSG00000141034.9	+	protein_coding	KNOWN	GID4	5	6	0.668629
chr17	18087886	18107971	18097928	ENSG00000108591.9	+	protein_coding	KNOWN	DRG2	21	13	0.859983
chr17	18107334	18110463	18108898	ENSG00000279428.1	-	TEC	KNOWN	RP11-258F1.2	1	1	0.900679
chr17	18108706	18179802	18144254	ENSG00000091536.16	+	protein_coding	KNOWN	MYO15A	17	66	0.962907
chr17	18172625	18184753	18178689	ENSG00000266677.1	-	antisense	KNOWN	RP11-258F1.1	2	3	0.874574
chr17	18183078	18209954	18196516	ENSG00000091542.8	+	protein_coding	KNOWN	ALKBH5	3	4	0.863022
chr17	18225587	18244875	18235231	ENSG00000131899.10	+	protein_coding	KNOWN	LLGL1	3	24	1.177093
chr17	18244836	18258916	18251876	ENSG00000177731.15	-	protein_coding	KNOWN	FLII	30	30	1.476936
chr17	18260534	18266552	18263543	ENSG00000177427.12	+	protein_coding	KNOWN	MIEF2	9	4	1.596881
chr17	18268080	18268828	18268454	ENSG00000260647.1	+	antisense	KNOWN	RP1-178F10.1	1	1	1.596881
chr17	18271428	18315007	18293217	ENSG00000177302.14	-	protein_coding	KNOWN	TOP3A	20	19	1.067051
chr17	18311904	18312651	18312277	ENSG00000228000.1	+	processed_pseudogene	KNOWN	RPL7AP65	1	1	0.682061
chr17	18312760	18313533	18313146	ENSG00000237382.2	+	processed_pseudogene	KNOWN	RPL21P121	1	2	0.682061
chr17	18315310	18328055	18321682	ENSG00000176994.10	+	protein_coding	KNOWN	SMCR8	1	2	0.682061
chr17	18327860	18363563	18345711	ENSG00000176974.17	-	protein_coding	KNOWN	SHMT1	11	12	0.931128
chr17	18340814	18340886	18340850	ENSG00000275820.1	-	miRNA	KNOWN	MIR6778	1	1	0.989693
chr17	18377662	18389647	18383654	ENSG00000214860.4	+	protein_coding	KNOWN	EVPLL	2	11	0.880488
chr17	18379855	18388984	18384419	ENSG00000264177.1	-	antisense	KNOWN	RP1-37N7.1	1	2	0.880488
chr17	18388871	18389459	18389165	ENSG00000267441.1	+	processed_pseudogene	KNOWN	RP1-37N7.5	1	1	0.880488
chr17	18390153	18390323	18390238	ENSG00000275206.1	-	unprocessed_pseudogene	KNOWN	RP1-37N7.7	1	1	0.827397
chr17	18393480	18400961	18397220	ENSG00000204471.3	+	unprocessed_pseudogene	KNOWN	TBC1D3P4	1	12	0.827397
chr17	18411159	18414380	18412769	ENSG00000220161.4	+	lincRNA	KNOWN	FLJ35934	1	2	0.335035
chr17	18415728	18425097	18420412	ENSG00000205266.9	+	transcribed_unprocessed_pseudogene	KNOWN	KRT17P5	6	8	0.335035
chr17	18418195	18418306	18418250	ENSG00000266162.1	-	processed_pseudogene	KNOWN	YWHAEP2	1	1	0.335035
chr17	18424321	18425097	18424709	ENSG00000279999.1	+	processed_transcript	KNOWN	AL353997.3	1	2	0.335035
chr17	18426861	18431848	18429354	ENSG00000186831.11	+	transcribed_unprocessed_pseudogene	KNOWN	KRT17P2	4	8	0.486014
chr17	18432051	18442895	18437473	ENSG00000214856.11	+	transcribed_unprocessed_pseudogene	KNOWN	KRT16P1	6	8	0.742246
chr17	18450244	18475920	18463082	ENSG00000229526.2	+	transcribed_processed_pseudogene	KNOWN	KRT16P4	2	2	0.431909
chr17	18452955	18453062	18453008	ENSG00000227919.1	+	unprocessed_pseudogene	KNOWN	AL353997.11	1	1	0.438245
chr17	18453574	18453739	18453656	ENSG00000267492.1	-	processed_pseudogene	KNOWN	RP1-37N7.6	1	1	0.438245
chr17	18460391	18463055	18461723	ENSG00000230662.1	+	processed_pseudogene	KNOWN	TNPO1P2	1	1	0.438245
chr17	18476737	18494945	18485841	ENSG00000171916.16	+	protein_coding	KNOWN	LGALS9C	15	11	0.553084
chr17	18497572	18501034	18499303	ENSG00000167494.8	-	unprocessed_pseudogene	KNOWN	NOS2P2	1	3	0.934680
chr17	18511221	18551705	18531463	ENSG00000273018.5	-	processed_transcript	KNOWN	CTD-2303H24.2	16	10	0.312722
chr17	18511262	18525930	18518596	ENSG00000233327.10	-	transcribed_unprocessed_pseudogene	KNOWN	USP32P2	8	5	0.428473
chr17	18524566	18526846	18525706	ENSG00000213077.5	-	protein_coding	KNOWN	FAM106A	1	1	0.428473
chr17	18527557	18528461	18528009	ENSG00000227689.1	+	processed_pseudogene	KNOWN	SRP68P2	1	2	0.428473
chr17	18537800	18625617	18581708	ENSG00000154874.14	-	transcribed_unprocessed_pseudogene	KNOWN	CCDC144B	9	17	0.188543
chr17	18572752	18572961	18572856	ENSG00000227077.3	+	processed_pseudogene	KNOWN	AC107983.4	1	1	0.182845
chr17	18605054	18605356	18605205	ENSG00000276532.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.211952
chr17	18635006	18661950	18648478	ENSG00000189375.10	-	protein_coding	KNOWN	TBC1D28	10	10	0.529731
chr17	18638019	18638370	18638194	ENSG00000262262.1	-	transcribed_processed_pseudogene	KNOWN	RP11-815I9.3	1	1	0.453700
chr17	18650195	18651542	18650868	ENSG00000174977.8	+	processed_pseudogene	KNOWN	AC026271.5	1	1	0.625115
chr17	18658429	18682262	18670345	ENSG00000249459.8	-	protein_coding	KNOWN	ZNF286B	7	5	0.386825
chr17	18667629	18669461	18668545	ENSG00000264885.1	-	sense_intronic	KNOWN	RP11-815I9.4	1	1	0.625115
chr17	18670946	18672873	18671909	ENSG00000240445.3	-	processed_pseudogene	KNOWN	FOXO3B	1	1	0.162002
chr17	18677261	18677757	18677509	ENSG00000224126.2	+	processed_pseudogene	KNOWN	UBE2SP2	1	1	0.162002
chr17	18697998	18736118	18717058	ENSG00000108448.20	+	protein_coding	KNOWN	TRIM16L	14	10	0.467651
chr17	18704640	18704769	18704704	ENSG00000265693.1	+	transcribed_processed_pseudogene	KNOWN	RP11-815I9.5	1	1	0.377987
chr17	18744024	18779349	18761686	ENSG00000171931.12	+	protein_coding	KNOWN	FBXW10	5	14	0.390010
chr17	18780995	18806714	18793854	ENSG00000171928.13	+	protein_coding	KNOWN	TVP23B	10	7	0.452624
chr17	18809956	18810940	18810448	ENSG00000265478.2	+	lincRNA	KNOWN	CTD-2145A24.5	1	1	0.306922
chr17	18835707	18842364	18839035	ENSG00000250111.3	+	unprocessed_pseudogene	KNOWN	AC107982.4	1	4	-0.072819
chr17	18840085	18931287	18885686	ENSG00000141127.14	+	protein_coding	KNOWN	PRPSAP2	29	12	0.499914
chr17	18840618	18840920	18840769	ENSG00000274747.1	+	misc_RNA	KNOWN	RN7SL627P	1	1	-0.072819
chr17	18859354	18861466	18860410	ENSG00000264273.1	-	antisense	KNOWN	CTD-2145A24.4	1	2	0.524307
chr17	18908279	18908865	18908572	ENSG00000235672.1	+	transcribed_processed_pseudogene	KNOWN	AC090286.2	1	1	0.388124
chr17	18943999	18944073	18944036	ENSG00000212618.1	+	snoRNA	NOVEL	snoMBII-202	1	1	0.434725
chr17	18950345	19022595	18986470	ENSG00000154025.15	+	protein_coding	KNOWN	SLC5A10	6	15	0.798374
chr17	18951625	18954149	18952887	ENSG00000196893.3	-	antisense	KNOWN	AC090286.4	1	2	0.535827
chr17	18968789	19004804	18986796	ENSG00000188522.14	-	protein_coding	KNOWN	FAM83G	4	6	0.893759
chr17	18986148	18986334	18986241	ENSG00000263045.1	-	processed_pseudogene	KNOWN	RP11-28B23.1	1	1	0.940899
chr17	19020673	19047637	19034155	ENSG00000154016.13	-	protein_coding	KNOWN	GRAP	5	6	0.873830
chr17	19030857	19033529	19032193	ENSG00000279825.1	+	TEC	KNOWN	CTC-457L16.1	1	1	0.867952
chr17	19061912	19062669	19062290	ENSG00000265185.5	+	snoRNA	KNOWN	SNORD3B-1	3	1	0.799438
chr17	19063346	19064136	19063741	ENSG00000262074.6	-	snoRNA	KNOWN	SNORD3B-2	3	1	0.799438
chr17	19077775	19087878	19082826	ENSG00000230197.6	+	lincRNA	KNOWN	RP11-160E2.17	3	3	0.754575
chr17	19082437	19084834	19083635	ENSG00000265746.1	+	processed_pseudogene	KNOWN	KYNUP2	1	4	0.754575
chr17	19091069	19091825	19091447	ENSG00000263394.1	-	lincRNA	KNOWN	RP11-160E2.19	1	1	0.608567
chr17	19092974	19096837	19094905	ENSG00000228157.4	+	processed_transcript	KNOWN	AC007952.5	3	3	0.608567
chr17	19112000	19112636	19112318	ENSG00000262202.4	-	lincRNA	KNOWN	RP11-160E2.6	1	1	0.550098
chr17	19112419	19112636	19112527	ENSG00000277947.1	-	snoRNA	KNOWN	SNORD3D	1	1	0.550098
chr17	19112420	19112636	19112528	ENSG00000281000.1	-	snoRNA	KNOWN	SNORD3D	1	1	0.550098
chr17	19127469	19159176	19143322	ENSG00000189152.10	+	protein_coding	KNOWN	GRAPL	5	4	0.889847
chr17	19141017	19143689	19142353	ENSG00000262319.1	-	antisense	KNOWN	CTC-457L16.2	1	1	0.876603
chr17	19150279	19151286	19150782	ENSG00000266664.1	+	sense_intronic	KNOWN	RP11-160E2.21	1	2	1.012375
chr17	19155727	19159111	19157419	ENSG00000197665.7	-	antisense	KNOWN	AC007952.6	2	3	1.012375
chr17	19160789	19162274	19161531	ENSG00000262292.2	+	lincRNA	KNOWN	RP11-160E2.11	1	1	1.012375
chr17	19164209	19174436	19169322	ENSG00000266311.6	-	lincRNA	KNOWN	AC007952.4	2	3	0.976558
chr17	19166896	19169668	19168282	ENSG00000261987.2	-	unprocessed_pseudogene	KNOWN	KYNUP1	1	5	1.012375
chr17	19188016	19188714	19188365	ENSG00000263934.4	+	snoRNA	KNOWN	SNORD3A	3	1	0.929819
chr17	19189665	19190245	19189955	ENSG00000264940.4	-	snoRNA	KNOWN	SNORD3C	3	1	0.955576
chr17	19203825	19214045	19208935	ENSG00000236022.6	+	lincRNA	KNOWN	RP11-160E2.16	3	3	0.902523
chr17	19208584	19211359	19209971	ENSG00000263206.1	+	transcribed_unprocessed_pseudogene	KNOWN	KYNUP3	1	5	0.881578
chr17	19215615	19336715	19276165	ENSG00000072134.15	+	protein_coding	KNOWN	EPN2	27	11	0.692925
chr17	19219143	19222527	19220835	ENSG00000281856.1	+	lincRNA	KNOWN	RP11-744A16.4	2	3	0.768203
chr17	19296596	19306261	19301428	ENSG00000235397.1	-	antisense	KNOWN	EPN2-AS1	1	3	0.743327
chr17	19334308	19336127	19335217	ENSG00000265263.1	-	antisense	KNOWN	RP11-135L13.4	1	2	0.843805
chr17	19337554	19378182	19357868	ENSG00000108641.14	-	protein_coding	KNOWN	B9D1	15	7	0.925884
chr17	19344506	19344574	19344540	ENSG00000221540.1	-	miRNA	KNOWN	MIR1180	1	1	0.843805
chr17	19377721	19383544	19380632	ENSG00000166484.19	+	protein_coding	KNOWN	MAPK7	18	7	1.011690
chr17	19383442	19387240	19385341	ENSG00000166482.11	-	protein_coding	KNOWN	MFAP4	5	6	1.011690
chr17	19411125	19417276	19414200	ENSG00000128482.15	+	protein_coding	KNOWN	RNF112	5	14	0.865988
chr17	19411786	19413118	19412452	ENSG00000265126.1	-	antisense	KNOWN	CTB-187M2.2	1	2	0.865988
chr17	19417804	19492991	19455397	ENSG00000235979.8	-	lincRNA	KNOWN	AC004448.5	11	4	0.703103
chr17	19419035	19424357	19421696	ENSG00000227078.1	+	lincRNA	KNOWN	AC004448.2	1	2	0.865988
chr17	19445970	19446852	19446411	ENSG00000189343.7	-	processed_pseudogene	KNOWN	RPS2P46	1	1	0.697713
chr17	19457080	19458399	19457739	ENSG00000231477.2	+	lincRNA	KNOWN	CTB-187M2.1	1	2	0.996945
chr17	19495385	19579034	19537209	ENSG00000142494.13	+	protein_coding	KNOWN	SLC47A1	14	19	0.429906
chr17	19496943	19497528	19497235	ENSG00000228331.2	+	processed_pseudogene	KNOWN	RPL17P43	1	1	0.274322
chr17	19557211	19557911	19557561	ENSG00000266079.4	+	snoRNA	KNOWN	SNORA59B	2	1	0.430040
chr17	19560111	19597922	19579016	ENSG00000262769.1	-	antisense	KNOWN	RP11-1113L8.1	1	4	0.361668
chr17	19579943	19596058	19588000	ENSG00000228983.8	+	transcribed_unprocessed_pseudogene	KNOWN	SLC47A1P1	3	7	0.347740
chr17	19582116	19582275	19582195	ENSG00000263107.1	-	processed_pseudogene	KNOWN	RP11-1113L8.2	1	1	0.305822
chr17	19600860	19601345	19601102	ENSG00000266179.2	+	processed_pseudogene	KNOWN	RP11-1113L8.6	1	2	0.417310
chr17	19601840	19602256	19602048	ENSG00000271900.1	+	processed_pseudogene	KNOWN	RP11-1113L8.7	1	2	0.417310
chr17	19602259	19603208	19602733	ENSG00000227225.1	+	unprocessed_pseudogene	KNOWN	MTND1P14	1	1	0.417310
chr17	19603274	19603345	19603309	ENSG00000242752.3	-	unprocessed_pseudogene	KNOWN	NMTRQ-TTG12-1	1	1	0.417310
chr17	19603797	19605048	19604422	ENSG00000228725.3	+	unprocessed_pseudogene	KNOWN	MTND2P12	1	1	0.417310
chr17	19605264	19605328	19605296	ENSG00000276510.1	+	miRNA	NOVEL	AC025627.1	1	1	0.417310
chr17	19605454	19605933	19605693	ENSG00000224254.2	+	unprocessed_pseudogene	KNOWN	MTCO1P39	1	1	0.417310
chr17	19615789	19633825	19624807	ENSG00000231625.4	+	transcribed_unprocessed_pseudogene	KNOWN	CTD-2104P17.1	2	5	0.154560
chr17	19648136	19677598	19662867	ENSG00000072210.18	+	protein_coding	KNOWN	ALDH3A2	26	12	0.349360
chr17	19649373	19649935	19649654	ENSG00000264932.3	-	antisense	KNOWN	CTD-2104P17.2	1	1	-0.028638
chr17	19649494	19649587	19649540	ENSG00000275982.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.028638
chr17	19662000	19662090	19662045	ENSG00000252349.1	+	snoRNA	NOVEL	SNORA31	1	1	0.427927
chr17	19678288	19718979	19698633	ENSG00000180638.17	-	protein_coding	KNOWN	SLC47A2	10	18	0.322653
chr17	19719059	19722428	19720743	ENSG00000262681.2	+	lincRNA	KNOWN	RP11-311F12.1	1	1	0.712243
chr17	19737682	19738542	19738112	ENSG00000264785.1	+	antisense	KNOWN	RP11-311F12.2	1	2	0.660466
chr17	19737984	19748943	19743463	ENSG00000108602.17	-	protein_coding	KNOWN	ALDH3A1	17	11	0.660466
chr17	19755244	19756207	19755725	ENSG00000230607.3	+	processed_pseudogene	KNOWN	AC005722.4	1	1	0.711849
chr17	19770829	19867936	19819382	ENSG00000083290.19	-	protein_coding	KNOWN	ULK2	11	28	0.239465
chr17	19840126	19840515	19840320	ENSG00000231096.1	+	processed_pseudogene	KNOWN	AC015726.1	1	1	0.342800
chr17	19855747	19856164	19855955	ENSG00000279251.1	+	TEC	KNOWN	RP11-78O7.1	1	1	0.134303
chr17	19868568	19868689	19868628	ENSG00000276406.1	+	lincRNA	KNOWN	RP11-78O7.3	1	1	0.134303
chr17	19896590	19897287	19896938	ENSG00000270091.1	-	lincRNA	KNOWN	RP11-78O7.2	2	2	0.556156
chr17	19904302	19978343	19941322	ENSG00000108599.14	-	protein_coding	KNOWN	AKAP10	11	15	0.296389
chr17	19929372	19929737	19929554	ENSG00000266126.1	-	sense_intronic	KNOWN	RP11-209D14.4	1	1	0.401161
chr17	20008051	20009234	20008642	ENSG00000261033.1	-	antisense	KNOWN	RP11-209D14.2	1	1	0.270840
chr17	20009344	20319026	20164185	ENSG00000128487.16	+	protein_coding	KNOWN	SPECC1	23	15	0.208677
chr17	20056287	20056630	20056458	ENSG00000225681.2	+	transcribed_processed_pseudogene	KNOWN	AC005730.2	1	1	0.203885
chr17	20111824	20112990	20112407	ENSG00000225014.1	+	transcribed_processed_pseudogene	KNOWN	KCTD9P1	1	1	-0.024732
chr17	20126388	20126488	20126438	ENSG00000212186.1	-	snRNA	KNOWN	RNU6-258P	1	1	-0.024732
chr17	20185082	20322973	20254027	ENSG00000263494.1	+	lincRNA	KNOWN	AC004702.2	1	2	0.292608
chr17	20290257	20290358	20290307	ENSG00000252971.1	+	snRNA	KNOWN	RNU6-1057P	1	1	0.513129
chr17	20321164	20403557	20362360	ENSG00000154898.15	+	transcribed_processed_pseudogene	KNOWN	CCDC144CP	3	19	0.071979
chr17	20323001	20323110	20323055	ENSG00000276577.1	+	snRNA	KNOWN	RNU6-467P	1	1	0.318907
chr17	20323058	20323337	20323197	ENSG00000266839.3	+	sense_intronic	KNOWN	RP11-121A13.3	1	1	0.318907
chr17	20340743	20341045	20340894	ENSG00000278701.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.010857
chr17	20375369	20376840	20376104	ENSG00000214832.5	-	transcribed_processed_pseudogene	KNOWN	UPF3AP2	2	2	-0.034272
chr17	20415547	20431008	20423277	ENSG00000189423.11	+	transcribed_unprocessed_pseudogene	KNOWN	USP32P3	3	5	0.201239
chr17	20415792	20416697	20416244	ENSG00000237911.2	-	unprocessed_pseudogene	KNOWN	SRP68P3	1	2	0.221503
chr17	20433206	20434285	20433745	ENSG00000265556.1	+	lincRNA	KNOWN	RP11-434D2.2	1	2	-0.089001
chr17	20436337	20447249	20441793	ENSG00000230528.7	+	transcribed_unprocessed_pseudogene	KNOWN	NOS2P3	2	6	-0.089001
chr17	20449395	20467539	20458467	ENSG00000170298.15	-	protein_coding	KNOWN	LGALS9B	6	11	0.699445
chr17	20481330	20483991	20482660	ENSG00000229586.2	-	processed_pseudogene	KNOWN	TNPO1P3	1	1	0.480121
chr17	20491323	20491443	20491383	ENSG00000263976.1	-	processed_pseudogene	KNOWN	YWHAEP3	1	1	0.263603
chr17	20493634	20494155	20493894	ENSG00000230088.1	-	processed_pseudogene	KNOWN	KRT16P5	1	1	0.263603
chr17	20501513	20512357	20506935	ENSG00000214822.8	-	transcribed_unprocessed_pseudogene	KNOWN	KRT16P3	4	8	0.326460
chr17	20507413	20508931	20508172	ENSG00000266925.1	-	lincRNA	KNOWN	RP11-434D2.7	1	1	0.263603
chr17	20512560	20517479	20515019	ENSG00000231645.2	-	transcribed_unprocessed_pseudogene	KNOWN	KRT17P6	2	8	0.552672
chr17	20519312	20528687	20523999	ENSG00000205215.8	-	transcribed_unprocessed_pseudogene	KNOWN	KRT17P7	4	8	0.552672
chr17	20526102	20526210	20526156	ENSG00000266042.1	+	processed_pseudogene	KNOWN	AC015818.6	1	1	0.552672
chr17	20530042	20530881	20530461	ENSG00000260907.1	-	lincRNA	KNOWN	AC008088.4	1	1	0.370708
chr17	20532248	20532881	20532564	ENSG00000265916.1	-	processed_pseudogene	KNOWN	RP11-434D2.9	1	1	0.370708
chr17	20542974	20544123	20543548	ENSG00000264981.1	-	unprocessed_pseudogene	KNOWN	RP11-434D2.10	1	3	0.370708
chr17	20543481	20550963	20547222	ENSG00000235203.2	-	unprocessed_pseudogene	KNOWN	TBC1D3P3	1	12	0.413290
chr17	20545371	20549952	20547661	ENSG00000267075.1	+	lincRNA	KNOWN	RP11-434D2.3	1	1	0.370708
chr17	20554137	20554380	20554258	ENSG00000230339.2	+	processed_pseudogene	KNOWN	RP11-434D2.8	1	1	0.701202
chr17	20554971	20559410	20557190	ENSG00000263946.1	-	transcribed_processed_pseudogene	KNOWN	RP11-434D2.11	2	3	0.701202
chr17	20564538	20564889	20564713	ENSG00000235323.2	+	processed_pseudogene	KNOWN	COTL1P2	1	1	0.701202
chr17	20576667	20578748	20577707	ENSG00000264422.1	-	lincRNA	KNOWN	RP11-434D2.12	1	2	0.308484
chr17	20579724	20580911	20580317	ENSG00000214819.1	+	protein_coding	KNOWN	CDRT15L2	1	2	0.308484
chr17	20583758	20591180	20587469	ENSG00000231258.2	-	unprocessed_pseudogene	KNOWN	ZSWIM5P2	1	3	0.313693
chr17	20589293	20590367	20589830	ENSG00000188013.6	+	processed_pseudogene	KNOWN	MEIS3P2	1	1	0.319701
chr17	20595531	20595708	20595619	ENSG00000232889.2	+	processed_pseudogene	KNOWN	AC087499.4	1	1	0.341220
chr17	20609462	20609610	20609536	ENSG00000226096.1	-	processed_pseudogene	KNOWN	AC087499.9	1	1	0.341220
chr17	20612667	20614008	20613337	ENSG00000235546.2	+	processed_pseudogene	KNOWN	AC087499.5	1	1	0.145290
chr17	20612912	20633234	20623073	ENSG00000227685.1	-	lincRNA	KNOWN	AC087499.10	1	4	0.139288
chr17	20633034	20633259	20633146	ENSG00000266364.1	-	transcribed_processed_pseudogene	KNOWN	RP11-218E15.1	1	1	0.107589
chr17	20647287	20681799	20664543	ENSG00000236504.2	+	unprocessed_pseudogene	KNOWN	AC087499.7	1	6	-0.021244
chr17	20710425	20710533	20710479	ENSG00000264874.1	-	processed_pseudogene	KNOWN	AC087499.8	1	1	-0.053439
chr17	20716481	20737127	20726804	ENSG00000226521.7	+	transcribed_unprocessed_pseudogene	KNOWN	AC126365.1	2	11	-0.137242
chr17	20743333	20754501	20748917	ENSG00000187870.7	-	unprocessed_pseudogene	KNOWN	RNFT1P3	1	8	-0.228157
chr17	20771058	20771427	20771242	ENSG00000218454.2	-	processed_pseudogene	KNOWN	HNRNPA1P19	1	1	-0.159880
chr17	20775642	20776905	20776273	ENSG00000213671.3	+	processed_pseudogene	KNOWN	OLA1P2	1	1	-0.159880
chr17	20784645	20785725	20785185	ENSG00000226549.3	+	processed_pseudogene	KNOWN	SCDP1	1	1	-0.159880
chr17	20788071	20789584	20788827	ENSG00000264215.1	+	lincRNA	KNOWN	RP11-283C24.1	1	1	-0.159880
chr17	20789217	20789595	20789406	ENSG00000264662.1	-	processed_pseudogene	KNOWN	RP11-283C24.2	1	1	-0.159880
chr17	20814620	20844257	20829438	ENSG00000226981.2	+	unprocessed_pseudogene	KNOWN	ABHD17AP6	1	4	-0.060701
chr17	20836447	20896140	20866293	ENSG00000205212.3	-	protein_coding	KNOWN	CCDC144NL	3	5	-0.202039
chr17	20855946	20857317	20856631	ENSG00000266369.1	+	antisense	KNOWN	RP11-344E13.4	1	1	-0.275465
chr17	20868433	21002276	20935354	ENSG00000233098.8	+	antisense	KNOWN	CCDC144NL-AS1	19	7	0.093962
chr17	20894532	20894638	20894585	ENSG00000252483.1	-	snRNA	KNOWN	RNU6-1178P	1	1	-0.101649
chr17	20901939	20902680	20902309	ENSG00000265790.1	-	processed_pseudogene	KNOWN	RNASEH1P1	1	1	-0.101649
chr17	20938023	20938344	20938183	ENSG00000265099.1	-	processed_pseudogene	KNOWN	RP11-344E13.1	1	1	0.091992
chr17	20956682	20958404	20957543	ENSG00000244456.2	+	transcribed_unprocessed_pseudogene	KNOWN	AC090774.2	1	2	0.144188
chr17	20963722	20980238	20971980	ENSG00000264660.2	+	antisense	KNOWN	RP11-381P6.1	1	2	0.183419
chr17	20981489	20981654	20981571	ENSG00000266009.1	+	transcribed_processed_pseudogene	KNOWN	RP11-746M1.2	1	1	0.207469
chr17	20983902	20984046	20983974	ENSG00000263729.1	+	processed_pseudogene	KNOWN	RP11-746M1.8	1	1	0.207469
chr17	20999593	21043760	21021676	ENSG00000124422.11	-	protein_coding	KNOWN	USP22	11	13	0.544061
chr17	20999747	21000323	21000035	ENSG00000263986.1	+	antisense	KNOWN	RP11-746M1.1	1	2	0.521243
chr17	21075556	21090615	21083085	ENSG00000236819.1	+	lincRNA	KNOWN	LINC01563	1	2	0.474199
chr17	21123364	21193265	21158314	ENSG00000109016.17	+	protein_coding	KNOWN	DHRS7B	10	7	0.290602
chr17	21176259	21176347	21176303	ENSG00000278176.1	-	miRNA	NOVEL	AC087393.1	1	1	0.689359
chr17	21197280	21214624	21205952	ENSG00000178307.9	-	protein_coding	KNOWN	TMEM11	6	4	0.482121
chr17	21214331	21230035	21222183	ENSG00000235530.6	+	antisense	KNOWN	AC087294.2	2	3	0.521873
chr17	21229334	21229628	21229481	ENSG00000263815.2	-	misc_RNA	KNOWN	RN7SL426P	1	1	0.521903
chr17	21238870	21253410	21246140	ENSG00000274180.1	-	protein_coding	KNOWN	NATD1	1	3	0.540667
chr17	21259968	21260501	21260234	ENSG00000266563.1	-	unprocessed_pseudogene	KNOWN	EIF1P5	1	2	0.644533
chr17	21284672	21315240	21299956	ENSG00000034152.18	+	protein_coding	KNOWN	MAP2K3	15	14	0.931566
chr17	21376197	21419872	21398034	ENSG00000184185.9	+	protein_coding	KNOWN	KCNJ12	2	3	0.783165
chr17	21444833	21445439	21445136	ENSG00000265881.1	-	processed_pseudogene	KNOWN	PDLIM1P2	1	1	0.421090
chr17	21456513	21460215	21458364	ENSG00000265043.1	-	lincRNA	KNOWN	RP11-728E14.3	1	1	0.360879
chr17	21457434	21458989	21458211	ENSG00000264023.1	+	lincRNA	KNOWN	RP11-728E14.2	1	2	0.360879
chr17	21504558	21505059	21504808	ENSG00000244582.2	+	processed_pseudogene	KNOWN	RPL21P120	1	1	0.159106
chr17	21519514	21521269	21520391	ENSG00000265265.1	+	lincRNA	KNOWN	RP11-822E23.7	1	2	0.384774
chr17	21524790	21574458	21549624	ENSG00000212719.10	-	protein_coding	KNOWN	C17orf51	5	3	0.340490
chr17	21532477	21574517	21553497	ENSG00000272780.5	-	processed_transcript	KNOWN	RP11-822E23.8	2	4	0.332123
chr17	21532974	21542786	21537880	ENSG00000266466.1	+	antisense	KNOWN	RP11-822E23.2	1	3	0.374926
chr17	21552509	21552711	21552610	ENSG00000266673.1	+	processed_pseudogene	KNOWN	RP11-822E23.3	1	1	0.429687
chr17	21566569	21574517	21570543	ENSG00000266050.2	-	transcribed_processed_pseudogene	KNOWN	RP11-822E23.6	2	3	0.034357
chr17	21573770	21574073	21573921	ENSG00000264245.1	+	processed_pseudogene	KNOWN	RP11-822E23.4	1	1	-0.265771
chr17	21577818	21577905	21577861	ENSG00000216100.2	+	miRNA	NOVEL	AC233702.1	1	1	-0.265771
chr17	21592794	21594180	21593487	ENSG00000263375.1	+	processed_pseudogene	KNOWN	RP11-822E23.5	1	1	0.054024
chr17	21614487	21641536	21628011	ENSG00000260157.3	+	transcribed_unprocessed_pseudogene	KNOWN	CH17-53B9.2	2	3	-0.318898
chr17	21655843	21657633	21656738	ENSG00000264617.1	-	unprocessed_pseudogene	KNOWN	AC144838.3	1	2	0.057640
chr17	21678086	21678418	21678252	ENSG00000274748.1	+	unprocessed_pseudogene	KNOWN	CH17-53B9.4	1	1	-0.010787
chr17	21692523	21704612	21698567	ENSG00000260458.3	+	protein_coding	KNOWN	KCNJ18	1	3	0.469722
chr17	22056587	22056755	22056671	ENSG00000265233.1	-	processed_pseudogene	KNOWN	AC144838.2	1	1	0.059108
chr17	22061961	22070538	22066249	ENSG00000265019.1	-	unprocessed_pseudogene	KNOWN	NCOR1P2	1	2	0.027580
chr17	22202995	22205154	22204074	ENSG00000263563.5	+	transcribed_unprocessed_pseudogene	KNOWN	UBBP4	2	2	-0.265269
chr17	22221221	22221605	22221413	ENSG00000263725.1	+	processed_pseudogene	KNOWN	FTLP13	1	1	0.043357
chr17	22234328	22266362	22250345	ENSG00000263609.1	-	lincRNA	KNOWN	RP11-1109M24.16	3	8	-0.243970
chr17	22266425	22288133	22277279	ENSG00000264956.1	+	lincRNA	KNOWN	RP11-1109M24.5	2	3	0.037696
chr17	22277867	22279289	22278578	ENSG00000266691.1	-	processed_pseudogene	KNOWN	RP11-1109M24.15	1	1	0.151231
chr17	22295293	22295380	22295336	ENSG00000222770.1	-	miRNA	NOVEL	AC138761.1	1	1	-0.134284
chr17	22298691	22299893	22299292	ENSG00000178130.9	+	lincRNA	KNOWN	FAM27L	2	2	-0.134284
chr17	22299134	22299467	22299300	ENSG00000264811.1	-	processed_pseudogene	KNOWN	RP11-1109M24.14	1	1	-0.134284
chr17	22301333	22301657	22301495	ENSG00000265567.1	-	processed_pseudogene	KNOWN	RP11-1109M24.13	1	1	-0.134284
chr17	22305671	22306013	22305842	ENSG00000264562.1	-	processed_pseudogene	KNOWN	RP11-1109M24.12	1	1	-0.134284
chr17	22331597	22332410	22332003	ENSG00000266806.1	+	unprocessed_pseudogene	KNOWN	RP11-744K17.3	1	2	0.058633
chr17	22406019	22413744	22409881	ENSG00000276399.1	+	lincRNA	KNOWN	FLJ36000	1	2	0.629052
chr17	22411893	22412229	22412061	ENSG00000266746.1	-	processed_pseudogene	KNOWN	RP11-1109M24.7	1	1	0.490910
chr17	22420022	22424731	22422376	ENSG00000261020.1	+	lincRNA	KNOWN	RP11-744K17.1	1	1	0.490910
chr17	22435390	22439033	22437211	ENSG00000266885.2	+	transcribed_processed_pseudogene	KNOWN	RP11-744K17.8	2	1	0.032403
chr17	22519617	22520709	22520163	ENSG00000266529.1	+	unprocessed_pseudogene	KNOWN	MTCYBP13	1	1	-0.067732
chr17	22523111	22524663	22523887	ENSG00000256618.2	+	protein_coding	KNOWN	MTRNR2L1	1	1	-0.067732
chr17	22524563	22525330	22524946	ENSG00000243655.2	-	antisense	KNOWN	RP11-846F4.12	1	2	-0.067732
chr17	22524738	22525696	22525217	ENSG00000264168.1	+	transcribed_processed_pseudogene	KNOWN	MTND1P15	2	1	-0.067732
chr17	22525899	22526937	22526418	ENSG00000263914.1	+	unprocessed_pseudogene	KNOWN	MTND2P13	1	1	-0.067732
chr17	22527150	22527213	22527181	ENSG00000273754.1	+	miRNA	NOVEL	AC132825.1	1	1	-0.067732
chr17	22527324	22529570	22528447	ENSG00000240103.2	+	unprocessed_pseudogene	KNOWN	RP11-846F4.6	1	1	-0.067732
chr17	22528853	22528921	22528887	ENSG00000241225.2	-	unprocessed_pseudogene	KNOWN	NMTRS-TGA3-1	1	1	-0.067732
chr17	22529934	22530609	22530271	ENSG00000263483.1	+	unprocessed_pseudogene	KNOWN	MTATP6P3	1	1	0.157813
chr17	22530612	22531392	22531002	ENSG00000264316.1	+	unprocessed_pseudogene	KNOWN	MTCO3P13	1	1	0.181847
chr17	22567423	22568713	22568068	ENSG00000275480.1	-	unprocessed_pseudogene	KNOWN	RP11-846F4.14	1	2	-0.439455
chr17	22606388	22606703	22606545	ENSG00000264930.1	+	processed_pseudogene	KNOWN	RP11-846F4.10	1	1	-0.462110
chr17	22676695	22692618	22684656	ENSG00000264262.1	-	lincRNA	KNOWN	RP11-285M22.3	1	2	-0.520319
chr17	22692834	22693613	22693223	ENSG00000265114.1	+	lincRNA	KNOWN	RP11-285M22.1	1	2	0.004529
chr17	22693325	22694831	22694078	ENSG00000264431.1	-	processed_pseudogene	KNOWN	RP11-285M22.2	1	1	0.004529
chr17	22704415	22705685	22705050	ENSG00000264970.1	+	processed_pseudogene	KNOWN	RP11-846F4.11	1	1	0.004529
chr17	26981694	26982090	26981892	ENSG00000263433.1	+	processed_pseudogene	KNOWN	RP11-260A9.1	1	1	-0.761261
chr17	26989189	26999941	26994565	ENSG00000264734.1	-	lincRNA	KNOWN	RP11-260A9.6	2	3	-0.170072
chr17	27002661	27003259	27002960	ENSG00000264172.1	-	processed_pseudogene	KNOWN	PDLIM1P3	1	1	-0.121906
chr17	27019527	27047934	27033730	ENSG00000266736.1	-	unprocessed_pseudogene	KNOWN	GTF2IP6	1	5	-0.026303
chr17	27057399	27058221	27057810	ENSG00000264837.1	+	processed_pseudogene	KNOWN	VN1R71P	1	1	-0.080993
chr17	27082690	27084036	27083363	ENSG00000265646.2	-	processed_pseudogene	KNOWN	TUFMP1	1	1	-0.055907
chr17	27237859	27241661	27239760	ENSG00000265246.1	-	lincRNA	KNOWN	RP11-663N22.1	1	2	0.155318
chr17	27255416	27255516	27255466	ENSG00000277627.2	+	miRNA	NOVEL	AC026254.1	1	1	0.435691
chr17	27274107	27274477	27274292	ENSG00000239223.3	+	processed_pseudogene	KNOWN	RPL34P31	1	1	0.218904
chr17	27280482	27280912	27280697	ENSG00000213664.4	+	processed_pseudogene	KNOWN	RPS16P8	1	1	0.218904
chr17	27281094	27281415	27281254	ENSG00000265453.1	+	processed_pseudogene	KNOWN	RP11-173M1.3	1	1	0.218904
chr17	27293910	27293996	27293953	ENSG00000263583.1	-	miRNA	KNOWN	MIR4522	1	1	0.658807
chr17	27294076	27315926	27305001	ENSG00000109046.14	+	protein_coding	KNOWN	WSB1	17	9	0.507349
chr17	27333256	27348491	27340873	ENSG00000266313.1	+	lincRNA	KNOWN	RP11-173M1.4	1	3	0.473346
chr17	27351858	27352584	27352221	ENSG00000265683.1	-	processed_pseudogene	KNOWN	RP11-173M1.5	1	1	0.479474
chr17	27411438	27412806	27412122	ENSG00000266356.1	-	unprocessed_pseudogene	KNOWN	RP11-578C11.2	1	3	0.389672
chr17	27417690	27431623	27424656	ENSG00000266433.6	+	transcribed_unprocessed_pseudogene	KNOWN	TBC1D3P5	3	13	0.414065
chr17	27456714	27626438	27541576	ENSG00000141068.13	+	protein_coding	KNOWN	KSR1	19	22	0.498686
chr17	27465112	27465541	27465326	ENSG00000265801.1	+	sense_intronic	KNOWN	RP11-720N19.2	1	1	0.491348
chr17	27526386	27527223	27526804	ENSG00000263368.1	-	processed_pseudogene	KNOWN	RP11-720N19.1	1	1	0.394752
chr17	27612588	27613251	27612919	ENSG00000266853.1	-	processed_pseudogene	KNOWN	ITM2BP1	1	1	0.266895
chr17	27623364	27640777	27632070	ENSG00000266728.5	+	protein_coding	KNOWN	AC015688.3	2	3	0.327771
chr17	27625484	27626438	27625961	ENSG00000266872.1	-	antisense	KNOWN	RP11-19P22.8	1	2	0.266895
chr17	27629798	27649560	27639679	ENSG00000168961.16	+	protein_coding	KNOWN	LGALS9	16	11	0.364246
chr17	27651334	27665712	27658523	ENSG00000264216.1	-	transcribed_unprocessed_pseudogene	KNOWN	NOS2P1	1	14	0.713480
chr17	27661549	27663658	27662603	ENSG00000265788.1	-	lincRNA	KNOWN	RP11-19P22.5	1	1	0.713480
chr17	27666749	27672803	27669776	ENSG00000265041.1	-	unprocessed_pseudogene	KNOWN	RP11-19P22.7	1	9	0.591079
chr17	27675894	27675997	27675945	ENSG00000266771.1	-	processed_pseudogene	KNOWN	RP11-19P22.10	1	1	0.449209
chr17	27677805	27678087	27677946	ENSG00000264240.1	-	processed_pseudogene	KNOWN	RP11-19P22.6	1	1	0.449209
chr17	27682476	27682737	27682606	ENSG00000264689.1	+	processed_pseudogene	KNOWN	RP11-19P22.2	1	1	0.449209
chr17	27683946	27684144	27684045	ENSG00000263604.1	-	processed_pseudogene	KNOWN	RP11-19P22.3	1	1	0.449209
chr17	27707178	27707250	27707214	ENSG00000265833.1	+	processed_pseudogene	KNOWN	RP1-66C13.1	1	1	-0.051974
chr17	27708111	27708138	27708124	ENSG00000266416.1	+	processed_pseudogene	KNOWN	RP1-66C13.2	1	1	-0.051974
chr17	27746132	27754954	27750543	ENSG00000266786.1	+	unprocessed_pseudogene	KNOWN	LGALS9DP	1	8	0.405407
chr17	27756766	27800499	27778632	ENSG00000007171.16	-	protein_coding	KNOWN	NOS2	2	27	0.537098
chr17	27798806	27893365	27846085	ENSG00000266202.1	-	protein_coding	KNOWN	RP1-66C13.4	1	5	0.269643
chr17	27874645	27881237	27877941	ENSG00000266527.1	+	antisense	KNOWN	RP11-138P22.1	1	2	0.221072
chr17	27878314	27894752	27886533	ENSG00000232859.9	-	protein_coding	KNOWN	LYRM9	7	5	0.217921
chr17	27929548	27974223	27951885	ENSG00000260019.1	-	lincRNA	KNOWN	RP11-218F4.1	1	4	0.439483
chr17	28018770	28018907	28018838	ENSG00000251818.1	+	scaRNA	NOVEL	SCARNA20	1	1	0.321918
chr17	28021668	28022265	28021966	ENSG00000266190.1	-	unprocessed_pseudogene	KNOWN	RP11-218F4.2	1	2	0.321918
chr17	28022330	28022464	28022397	ENSG00000202389.1	-	snoRNA	NOVEL	SNORA70	1	1	0.321918
chr17	28041737	28196381	28119059	ENSG00000087095.12	+	protein_coding	KNOWN	NLK	6	12	0.220171
chr17	28061967	28062068	28062017	ENSG00000252283.1	+	misc_RNA	NOVEL	Vault	1	1	0.216843
chr17	28116239	28116406	28116322	ENSG00000240873.1	-	processed_pseudogene	KNOWN	RPS29P22	1	1	0.275058
chr17	28219285	28220005	28219645	ENSG00000267644.1	+	lincRNA	KNOWN	CTD-2008P7.10	1	1	0.349488
chr17	28226563	28228065	28227314	ENSG00000237575.4	+	transcribed_unprocessed_pseudogene	KNOWN	PYY2	2	2	0.349488
chr17	28232590	28235281	28233935	ENSG00000267259.1	-	lincRNA	KNOWN	CTD-2008P7.9	1	1	0.658692
chr17	28246454	28248006	28247230	ENSG00000266830.1	-	lincRNA	KNOWN	CTD-2008P7.8	1	1	0.658692
chr17	28247444	28248289	28247866	ENSG00000265060.1	+	transcribed_unprocessed_pseudogene	KNOWN	PPY2P	2	2	0.658692
chr17	28256375	28256669	28256522	ENSG00000263788.1	-	processed_pseudogene	KNOWN	CTD-2008P7.7	1	1	0.806237
chr17	28256438	28265551	28260994	ENSG00000264486.1	+	lincRNA	KNOWN	CTD-2008P7.3	1	2	0.806237
chr17	28263634	28266369	28265001	ENSG00000260777.1	-	lincRNA	KNOWN	CTD-2008P7.1	1	1	0.806237
chr17	28269203	28272365	28270784	ENSG00000266306.1	-	unprocessed_pseudogene	KNOWN	CTD-2008P7.6	1	3	0.556272
chr17	28274657	28275716	28275186	ENSG00000264029.1	-	unprocessed_pseudogene	KNOWN	CTD-2008P7.5	1	2	0.472175
chr17	28275986	28317783	28296884	ENSG00000265480.5	-	transcribed_unprocessed_pseudogene	KNOWN	KRT18P55	3	4	0.413739
chr17	28276463	28276553	28276508	ENSG00000207844.1	-	miRNA	NOVEL	AC061975.1	1	1	0.472175
chr17	28319095	28328685	28323890	ENSG00000109084.13	+	protein_coding	KNOWN	TMEM97	5	4	0.637592
chr17	28328325	28335489	28331907	ENSG00000109083.13	-	protein_coding	KNOWN	IFT20	16	6	0.686984
chr17	28335602	28347009	28341305	ENSG00000109079.9	+	protein_coding	KNOWN	TNFAIP1	6	7	0.702045
chr17	28347177	28357522	28352349	ENSG00000004142.11	-	protein_coding	KNOWN	POLDIP2	2	11	1.004188
chr17	28357581	28363683	28360632	ENSG00000244045.10	+	protein_coding	KNOWN	TMEM199	9	7	1.117527
chr17	28357647	28381697	28369672	ENSG00000258924.4	+	processed_transcript	KNOWN	CTB-96E2.3	1	6	1.107269
chr17	28360654	28360734	28360694	ENSG00000264302.1	+	miRNA	KNOWN	MIR4723	1	1	1.117527
chr17	28361601	28362859	28362230	ENSG00000265618.1	-	antisense	KNOWN	CTB-96E2.7	1	2	1.117527
chr17	28364268	28365244	28364756	ENSG00000274529.4	-	protein_coding	KNOWN	SEBOX	2	4	1.117527
chr17	28364288	28368012	28366150	ENSG00000273171.1	-	protein_coding	KNOWN	CTB-96E2.2	1	4	1.117527
chr17	28364356	28404049	28384202	ENSG00000004139.13	+	protein_coding	KNOWN	SARM1	8	11	1.005897
chr17	28367276	28373091	28370183	ENSG00000109072.13	-	protein_coding	KNOWN	VTN	3	8	1.106313
chr17	28373256	28373562	28373409	ENSG00000277450.1	+	sense_intronic	KNOWN	CTB-96E2.10	1	1	1.096438
chr17	28373673	28374301	28373987	ENSG00000279532.1	-	TEC	KNOWN	CTB-96E2.6	1	1	1.096438
chr17	28394756	28407197	28400976	ENSG00000076351.12	-	protein_coding	KNOWN	SLC46A1	9	5	0.832178
chr17	28405240	28406796	28406018	ENSG00000265254.1	+	antisense	KNOWN	CTD-2350C19.2	1	2	0.832178
chr17	28416922	28417492	28417207	ENSG00000265541.1	+	unprocessed_pseudogene	KNOWN	H3F3BP2	1	2	0.800652
chr17	28444063	28445563	28444813	ENSG00000263870.1	-	unprocessed_pseudogene	KNOWN	CTD-2350C19.5	1	3	0.210255
chr17	28455752	28614197	28534974	ENSG00000258472.8	-	protein_coding	KNOWN	RP11-192H23.4	4	8	0.920010
chr17	28467822	28468406	28468114	ENSG00000263266.2	+	processed_pseudogene	KNOWN	RPS7P1	1	1	0.387448
chr17	28473293	28497781	28485537	ENSG00000007216.14	+	protein_coding	KNOWN	SLC13A2	7	14	0.742740
chr17	28506243	28538896	28522569	ENSG00000109101.7	+	protein_coding	KNOWN	FOXN1	3	9	1.081773
chr17	28546707	28552668	28549687	ENSG00000109103.11	-	protein_coding	KNOWN	UNC119	8	5	1.207078
chr17	28553383	28571872	28562627	ENSG00000087111.20	-	protein_coding	KNOWN	PIGS	15	12	1.009193
chr17	28573115	28577264	28575189	ENSG00000109107.13	-	protein_coding	KNOWN	ALDOC	9	10	1.010418
chr17	28573117	28574243	28573680	ENSG00000265168.1	+	antisense	KNOWN	RP11-192H23.5	1	2	1.010418
chr17	28577565	28599279	28588422	ENSG00000076382.16	-	protein_coding	KNOWN	SPAG5	16	24	0.933548
chr17	28598790	28617377	28608083	ENSG00000227543.4	+	processed_transcript	KNOWN	SPAG5-AS1	5	3	0.833057
chr17	28601827	28602284	28602055	ENSG00000264608.1	-	sense_intronic	KNOWN	RP11-192H23.8	1	1	0.830551
chr17	28607963	28609730	28608846	ENSG00000265287.2	+	antisense	KNOWN	RP11-192H23.6	1	2	0.830551
chr17	28607964	28614200	28611082	ENSG00000167524.14	-	protein_coding	KNOWN	SGK494	12	12	0.834803
chr17	28614440	28645454	28629947	ENSG00000007202.14	-	protein_coding	KNOWN	KIAA0100	16	39	0.890825
chr17	28633206	28635950	28634578	ENSG00000264044.1	+	antisense	KNOWN	RP11-192H23.7	2	3	0.945150
chr17	28648356	28662189	28655272	ENSG00000132581.9	-	protein_coding	KNOWN	SDF2	10	4	0.983996
chr17	28655557	28655983	28655770	ENSG00000240494.2	+	processed_pseudogene	KNOWN	RPS12P28	1	1	0.989232
chr17	28662091	28702684	28682387	ENSG00000109111.14	+	protein_coding	KNOWN	SUPT6H	12	38	0.966903
chr17	28670054	28672804	28671429	ENSG00000265205.1	-	antisense	KNOWN	AC010761.13	1	2	0.983793
chr17	28703197	28711854	28707525	ENSG00000167525.13	-	protein_coding	KNOWN	PROCA1	10	5	1.108086
chr17	28714281	28718429	28716355	ENSG00000109113.17	-	protein_coding	KNOWN	RAB34	23	11	1.774471
chr17	28719393	28724359	28721876	ENSG00000198242.13	+	protein_coding	KNOWN	RPL23A	9	6	1.774471
chr17	28720550	28720616	28720583	ENSG00000238423.1	+	snoRNA	KNOWN	SNORD42B	1	1	1.774471
chr17	28721487	28722877	28722182	ENSG00000264577.1	-	antisense	KNOWN	AC010761.8	1	2	1.774471
chr17	28722582	28722653	28722617	ENSG00000238578.1	+	snoRNA	KNOWN	SNORD4A	1	1	1.774471
chr17	28723429	28723492	28723460	ENSG00000238649.1	+	snoRNA	KNOWN	SNORD42A	1	1	1.774471
chr17	28723682	28723753	28723717	ENSG00000238597.1	+	snoRNA	KNOWN	SNORD4B	1	1	1.774471
chr17	28724348	28727935	28726141	ENSG00000160606.10	-	protein_coding	KNOWN	TLCD1	4	4	1.774471
chr17	28725897	28743455	28734676	ENSG00000160602.13	+	protein_coding	KNOWN	NEK8	8	15	1.088695
chr17	28727258	28727739	28727498	ENSG00000267729.1	+	antisense	KNOWN	AC010761.14	1	2	1.774471
chr17	28732963	28743102	28738032	ENSG00000265073.1	-	antisense	KNOWN	AC010761.6	2	2	0.879639
chr17	28743984	28750958	28747471	ENSG00000076604.14	+	protein_coding	KNOWN	TRAF4	17	8	0.911160
chr17	28745569	28747652	28746610	ENSG00000265474.1	-	antisense	KNOWN	AC010761.9	1	2	0.879639
chr17	28749731	28750079	28749905	ENSG00000265840.1	-	antisense	KNOWN	AC010761.10	1	2	0.932335
chr17	28755978	28855232	28805605	ENSG00000173065.13	-	protein_coding	KNOWN	FAM222B	15	5	0.771336
chr17	28802444	28802822	28802633	ENSG00000243053.2	+	processed_pseudogene	KNOWN	RPL31P58	1	1	0.628659
chr17	28834722	28834822	28834772	ENSG00000238516.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.673848
chr17	28848860	28849592	28849226	ENSG00000264138.1	+	unprocessed_pseudogene	KNOWN	RP11-20B24.3	1	2	0.673848
chr17	28854938	28861067	28858002	ENSG00000132591.11	+	protein_coding	KNOWN	ERAL1	8	10	0.663755
chr17	28861072	28861966	28861519	ENSG00000264066.4	-	lincRNA	KNOWN	RP11-20B24.2	1	1	0.663755
chr17	28861369	28861440	28861404	ENSG00000273915.1	-	miRNA	KNOWN	MIR451A	1	1	0.663755
chr17	28861514	28861624	28861569	ENSG00000277441.1	-	miRNA	KNOWN	MIR144	1	1	0.663755
chr17	28861655	28861730	28861692	ENSG00000278521.1	-	miRNA	KNOWN	MIR4732	1	1	0.663755
chr17	28879335	28897679	28888507	ENSG00000132589.15	-	protein_coding	KNOWN	FLOT2	12	13	0.975646
chr17	28892469	28893342	28892905	ENSG00000264304.1	+	antisense	KNOWN	RP11-20B24.7	1	2	1.201839
chr17	28897738	28899402	28898570	ENSG00000266642.2	+	antisense	KNOWN	RP11-20B24.4	2	3	1.201839
chr17	28897781	28903071	28900426	ENSG00000167536.13	-	protein_coding	KNOWN	DHRS13	5	5	1.201839
chr17	28905250	28951771	28928510	ENSG00000109118.13	-	protein_coding	KNOWN	PHF12	17	15	0.800266
chr17	28926275	28944749	28935512	ENSG00000265845.2	+	antisense	KNOWN	RP11-20B24.5	3	2	0.653966
chr17	28944796	28945394	28945095	ENSG00000265908.1	+	antisense	KNOWN	RP11-20B24.6	1	1	0.590111
chr17	28950513	29057220	29003866	ENSG00000179761.11	+	protein_coding	KNOWN	PIPOX	10	11	0.916313
chr17	28954901	29006440	28980670	ENSG00000063015.19	-	protein_coding	KNOWN	SEZ6	10	18	1.057331
chr17	29009799	29011009	29010404	ENSG00000263613.1	-	antisense	KNOWN	RP11-321A17.5	1	3	0.868604
chr17	29012865	29016512	29014688	ENSG00000238007.1	+	sense_intronic	KNOWN	AC024619.2	2	2	0.821903
chr17	29021325	29021640	29021482	ENSG00000263781.3	-	processed_pseudogene	KNOWN	RP11-321A17.3	1	1	0.821903
chr17	29071124	29071594	29071359	ENSG00000276995.1	-	lincRNA	KNOWN	RP11-321A17.6	1	1	0.863005
chr17	29073517	29180412	29126964	ENSG00000196535.14	-	protein_coding	KNOWN	MYO18A	24	42	1.132046
chr17	29073521	29078857	29076189	ENSG00000221995.5	-	protein_coding	KNOWN	TIAF1	1	1	0.863005
chr17	29140483	29155489	29147986	ENSG00000263709.1	+	antisense	KNOWN	RP11-321A17.4	1	2	1.216297
chr17	29197071	29197785	29197428	ENSG00000264050.1	-	processed_pseudogene	KNOWN	RP11-22N12.2	1	1	0.385351
chr17	29203426	29204474	29203950	ENSG00000178082.6	-	processed_pseudogene	KNOWN	TWF1P1	1	1	0.385351
chr17	29246863	29254494	29250678	ENSG00000108255.7	+	protein_coding	KNOWN	CRYBA1	2	6	0.565121
chr17	29255836	29294118	29274977	ENSG00000108256.8	-	protein_coding	KNOWN	NUFIP2	2	4	0.298454
chr17	29301154	29301228	29301191	ENSG00000277347.1	+	miRNA	NOVEL	AC005412.1	1	1	0.156843
chr17	29340482	29340822	29340652	ENSG00000239256.1	-	processed_pseudogene	KNOWN	RPL35AP35	1	1	0.278405
chr17	29352069	29404105	29378087	ENSG00000266111.2	+	lincRNA	KNOWN	RP11-296K13.4	1	2	0.464048
chr17	29369717	29390777	29380247	ENSG00000264808.1	-	antisense	KNOWN	RP11-802D6.1	1	2	0.668429
chr17	29388560	29388683	29388621	ENSG00000222363.1	+	snRNA	KNOWN	RNU4-34P	1	1	0.679976
chr17	29390464	29551904	29471184	ENSG00000160551.9	+	protein_coding	KNOWN	TAOK1	6	20	0.498560
chr17	29390662	29390730	29390696	ENSG00000263719.1	+	miRNA	KNOWN	MIR4523	1	1	0.560469
chr17	29424762	29424867	29424814	ENSG00000253064.1	-	snRNA	KNOWN	RNU6-711P	1	1	0.705983
chr17	29445300	29445400	29445350	ENSG00000202205.1	-	snRNA	KNOWN	RNU6-1034P	1	1	0.690438
chr17	29560547	29707090	29633818	ENSG00000264031.1	+	antisense	KNOWN	ABHD15-AS1	1	2	0.689654
chr17	29560547	29567137	29563842	ENSG00000168792.4	-	protein_coding	KNOWN	ABHD15	1	2	0.205521
chr17	29566052	29573157	29569604	ENSG00000167543.15	+	protein_coding	KNOWN	TP53I13	12	7	0.607356
chr17	29569580	29570519	29570049	ENSG00000264290.1	+	sense_intronic	KNOWN	RP11-68I3.4	1	2	0.706175
chr17	29573469	29594054	29583761	ENSG00000108262.15	-	protein_coding	KNOWN	GIT1	15	21	1.139160
chr17	29589769	29614761	29602265	ENSG00000198720.12	+	protein_coding	KNOWN	ANKRD13B	9	16	1.156855
chr17	29591703	29592241	29591972	ENSG00000264647.1	-	antisense	KNOWN	RP11-68I3.7	1	2	1.259719
chr17	29614756	29622907	29618831	ENSG00000167549.18	-	protein_coding	KNOWN	CORO6	12	11	0.727117
chr17	29621617	29622254	29621935	ENSG00000264007.1	-	sense_intronic	KNOWN	RP11-68I3.10	1	1	0.727117
chr17	29625938	29930276	29778107	ENSG00000141298.17	-	protein_coding	KNOWN	SSH2	12	16	0.318802
chr17	29639627	29640825	29640226	ENSG00000263370.1	+	antisense	KNOWN	RP11-68I3.5	1	2	0.907759
chr17	29641611	29641702	29641656	ENSG00000222858.1	-	snRNA	KNOWN	RNU6-920P	1	1	0.907759
chr17	29644796	29645847	29645321	ENSG00000265625.1	-	sense_intronic	KNOWN	RP11-68I3.11	1	1	0.907759
chr17	29716279	29716685	29716482	ENSG00000240531.1	-	transcribed_processed_pseudogene	KNOWN	RPL21P123	1	1	-0.043360
chr17	29761103	29787836	29774469	ENSG00000263657.1	+	antisense	KNOWN	RP11-82O19.1	1	3	0.365812
chr17	29775747	29776701	29776224	ENSG00000265713.1	-	transcribed_processed_pseudogene	KNOWN	RP11-82O19.2	1	1	0.392116
chr17	29777619	29777744	29777681	ENSG00000252657.1	+	snoRNA	NOVEL	SNORA70	1	1	0.392116
chr17	29855759	29856332	29856045	ENSG00000240074.1	+	processed_pseudogene	KNOWN	RPL9P30	1	1	0.325306
chr17	29863402	29866092	29864747	ENSG00000263477.1	+	antisense	KNOWN	RP11-338L22.2	1	2	0.325306
chr17	29883006	29883109	29883057	ENSG00000239129.1	+	snoRNA	NOVEL	snoU13	1	1	0.198301
chr17	29929200	30108452	30018826	ENSG00000176927.14	+	protein_coding	KNOWN	EFCAB5	12	23	0.156836
chr17	29972514	29973027	29972770	ENSG00000264435.1	+	transcribed_processed_pseudogene	KNOWN	RP11-338L22.3	1	1	0.175515
chr17	30012033	30012118	30012075	ENSG00000264715.1	+	miRNA	NOVEL	AC104996.1	1	1	0.006600
chr17	30059052	30059147	30059099	ENSG00000207011.1	-	misc_RNA	KNOWN	RNY4P13	1	1	0.199572
chr17	30059054	30059147	30059100	ENSG00000267482.1	-	unprocessed_pseudogene	KNOWN	RNY4P13	1	1	0.199572
chr17	30059339	30065677	30062508	ENSG00000265289.1	-	antisense	KNOWN	AC104984.4	1	2	0.199572
chr17	30068632	30069631	30069131	ENSG00000266876.1	+	transcribed_processed_pseudogene	KNOWN	RP11-1148O4.1	1	1	0.199572
chr17	30090366	30117497	30103931	ENSG00000265394.1	-	antisense	KNOWN	RP11-1148O4.2	1	2	0.323803
chr17	30115521	30186475	30150998	ENSG00000126653.15	+	protein_coding	KNOWN	NSRP1	17	8	0.111901
chr17	30117079	30117172	30117125	ENSG00000199071.2	+	miRNA	KNOWN	MIR423	1	1	0.210869
chr17	30117079	30117172	30117125	ENSG00000266919.1	-	sense_intronic	KNOWN	MIR3184	1	1	0.210869
chr17	30122429	30126118	30124273	ENSG00000265739.1	-	antisense	KNOWN	RP11-354P11.3	1	2	0.210869
chr17	30144062	30144790	30144426	ENSG00000266987.1	-	antisense	KNOWN	RP11-354P11.8	1	2	0.240694
chr17	30194319	30236002	30215160	ENSG00000108576.9	-	protein_coding	KNOWN	SLC6A4	5	15	0.365476
chr17	30204318	30206468	30205393	ENSG00000264125.1	+	antisense	KNOWN	RP11-354P11.4	1	2	0.180801
chr17	30238741	30252237	30245489	ENSG00000266120.1	+	antisense	KNOWN	RP11-354P11.2	1	2	0.263900
chr17	30246757	30246820	30246788	ENSG00000252112.1	-	snoRNA	NOVEL	SNORD63	1	1	0.264459
chr17	30248195	30292056	30270125	ENSG00000108578.14	-	protein_coding	KNOWN	BLMH	13	12	0.135073
chr17	30288071	30288177	30288124	ENSG00000222679.1	-	snRNA	KNOWN	RNU6-1267P	1	1	-0.026653
chr17	30316333	30334059	30325196	ENSG00000182271.12	-	protein_coding	KNOWN	TMIGD1	2	7	0.138806
chr17	30344503	30344604	30344553	ENSG00000207132.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.267563
chr17	30360463	30360566	30360514	ENSG00000201255.1	+	snRNA	KNOWN	RNU6-990P	1	1	0.258502
chr17	30378905	30469989	30424447	ENSG00000108582.11	+	protein_coding	KNOWN	CPD	10	21	0.189403
chr17	30477362	30527592	30502477	ENSG00000108587.14	+	protein_coding	KNOWN	GOSR1	14	10	0.310576
chr17	30529688	30542416	30536052	ENSG00000264958.2	+	unprocessed_pseudogene	KNOWN	ALOX12P1	1	9	0.473181
chr17	30550493	30551189	30550841	ENSG00000263860.1	-	lincRNA	KNOWN	RP11-218M11.3	1	2	0.738813
chr17	30551193	30551802	30551497	ENSG00000279431.1	+	TEC	KNOWN	RP11-218M11.7	1	1	0.738813
chr17	30553697	30558962	30556329	ENSG00000264242.2	+	unprocessed_pseudogene	KNOWN	RP11-271K11.1	1	7	0.738813
chr17	30557112	30563493	30560302	ENSG00000266733.5	+	protein_coding	KNOWN	TBC1D29	4	6	0.738813
chr17	30557732	30558502	30558117	ENSG00000266775.1	-	antisense	KNOWN	RP11-218M11.6	1	1	0.738813
chr17	30564057	30565576	30564816	ENSG00000259928.1	-	lincRNA	KNOWN	RP11-218M11.1	1	1	0.738813
chr17	30567700	30571748	30569724	ENSG00000231870.4	-	unprocessed_pseudogene	KNOWN	KRT17P3	1	7	0.670345
chr17	30573471	30577000	30575235	ENSG00000231421.7	-	processed_transcript	KNOWN	AC006050.2	3	3	0.580346
chr17	30576464	30672789	30624626	ENSG00000214719.11	+	processed_transcript	KNOWN	AC005562.1	5	9	0.489801
chr17	30600796	30615980	30608388	ENSG00000248121.8	+	transcribed_unprocessed_pseudogene	KNOWN	SMURF2P1	2	5	0.337977
chr17	30617680	30617790	30617735	ENSG00000273609.1	-	unprocessed_pseudogene	KNOWN	RP11-271K11.6	1	1	0.154053
chr17	30624413	30625494	30624953	ENSG00000264943.1	+	processed_pseudogene	KNOWN	SH3GL1P2	1	1	0.154053
chr17	30629680	30637466	30633573	ENSG00000250462.8	+	transcribed_unprocessed_pseudogene	KNOWN	LRRC37BP1	3	5	0.787905
chr17	30702504	30702775	30702639	ENSG00000241631.3	-	misc_RNA	KNOWN	RN7SL316P	1	1	0.516958
chr17	30702506	30702586	30702546	ENSG00000281673.1	-	miRNA	NOVEL	AC005562.2	1	1	0.516958
chr17	30709299	30790908	30750103	ENSG00000264538.6	+	transcribed_unprocessed_pseudogene	KNOWN	SUZ12P1	7	9	0.681601
chr17	30724982	30725181	30725081	ENSG00000279337.1	-	TEC	KNOWN	CTD-2349P21.7	1	1	0.954488
chr17	30726305	30727564	30726934	ENSG00000265443.1	-	lincRNA	KNOWN	CTD-2349P21.6	1	2	0.954488
chr17	30729469	30731202	30730335	ENSG00000263603.1	+	lincRNA	KNOWN	CTD-2349P21.5	2	2	0.970415
chr17	30738182	30740275	30739228	ENSG00000280069.1	+	TEC	KNOWN	CTD-2349P21.3	1	1	0.977432
chr17	30769388	30824776	30797082	ENSG00000176390.11	-	protein_coding	KNOWN	CRLF3	6	8	0.330799
chr17	30781493	30782221	30781857	ENSG00000265791.1	-	sense_intronic	KNOWN	CTD-2349P21.10	1	2	0.317995
chr17	30792372	30792833	30792602	ENSG00000266490.1	+	lincRNA	KNOWN	CTD-2349P21.9	1	1	0.243110
chr17	30803654	30804077	30803865	ENSG00000276250.1	+	antisense	KNOWN	CTD-2349P21.12	1	1	0.243110
chr17	30830901	30831318	30831109	ENSG00000242439.1	+	processed_pseudogene	KNOWN	CTD-2349P21.1	1	1	0.479015
chr17	30831970	30895869	30863919	ENSG00000176208.8	+	protein_coding	KNOWN	ATAD5	3	23	0.261315
chr17	30834325	30863028	30848676	ENSG00000265334.1	-	antisense	KNOWN	CTD-2349P21.11	1	2	0.407258
chr17	30861843	30861938	30861890	ENSG00000212190.1	+	snRNA	KNOWN	RNU6-298P	1	1	0.320933
chr17	30863921	30864940	30864430	ENSG00000263531.1	-	antisense	KNOWN	RP13-753N3.1	1	2	0.320933
chr17	30897336	30906820	30902078	ENSG00000172171.10	-	protein_coding	KNOWN	TEFM	5	4	-0.033539
chr17	30899110	30899651	30899380	ENSG00000275185.1	+	antisense	KNOWN	RP13-753N3.3	1	1	-0.033539
chr17	30906344	30959322	30932833	ENSG00000184060.10	+	protein_coding	KNOWN	ADAP2	11	11	0.591749
chr17	30956280	30956961	30956620	ENSG00000230113.1	-	antisense	KNOWN	AC091177.1	1	2	0.808983
chr17	30959564	30959850	30959707	ENSG00000266274.2	+	misc_RNA	KNOWN	RN7SL138P	1	1	0.808983
chr17	30964935	30965500	30965217	ENSG00000265743.1	-	lincRNA	KNOWN	RP11-848P1.3	1	2	0.808983
chr17	30968785	30999911	30984348	ENSG00000181481.13	+	protein_coding	KNOWN	RNF135	7	6	0.516945
chr17	30971652	30973312	30972482	ENSG00000264456.1	+	sense_intronic	KNOWN	RP11-848P1.2	1	1	0.573398
chr17	30975387	30975954	30975670	ENSG00000264743.2	+	processed_pseudogene	KNOWN	DPRXP4	1	1	0.573398
chr17	30978610	30980250	30979430	ENSG00000266340.1	-	antisense	KNOWN	RP11-848P1.4	1	2	0.573398
chr17	31008154	31008319	31008236	ENSG00000264148.1	-	processed_pseudogene	KNOWN	RP11-848P1.7	1	1	0.367270
chr17	31008497	31093127	31050812	ENSG00000266865.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-848P1.9	6	7	0.315215
chr17	31038575	31059121	31048848	ENSG00000265798.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-271K11.5	3	6	0.249680
chr17	31090787	31095450	31093118	ENSG00000264107.1	-	antisense	KNOWN	RP11-848P1.5	1	3	0.438723
chr17	31094350	31094425	31094387	ENSG00000265444.1	-	miRNA	KNOWN	MIR4733	1	1	0.438723
chr17	31094927	31382116	31238521	ENSG00000196712.16	+	protein_coding	KNOWN	NF1	23	58	0.174360
chr17	31133182	31138518	31135850	ENSG00000266371.1	+	sense_intronic	KNOWN	RP11-142O6.1	1	2	0.152113
chr17	31272013	31297539	31284776	ENSG00000126861.4	-	protein_coding	KNOWN	OMG	4	3	0.186173
chr17	31303766	31314112	31308939	ENSG00000185862.6	-	protein_coding	KNOWN	EVI2B	2	3	-0.066341
chr17	31305213	31318831	31312022	ENSG00000265118.5	-	protein_coding	KNOWN	CTD-2370N5.3	4	5	-0.034730
chr17	31317560	31321884	31319722	ENSG00000126860.11	-	protein_coding	KNOWN	EVI2A	3	3	0.009530
chr17	31345521	31346187	31345854	ENSG00000263535.1	+	processed_pseudogene	KNOWN	AK4P1	1	1	0.198907
chr17	31391624	31538217	31464920	ENSG00000131242.15	+	protein_coding	KNOWN	RAB11FIP4	11	15	0.642105
chr17	31427203	31427296	31427249	ENSG00000276244.1	+	miRNA	NOVEL	AC135724.1	1	1	0.716893
chr17	31465543	31465832	31465687	ENSG00000239595.3	+	misc_RNA	KNOWN	RN7SL79P	1	1	0.676954
chr17	31518432	31518729	31518580	ENSG00000264862.2	+	misc_RNA	KNOWN	RN7SL45P	1	1	0.703921
chr17	31533171	31533938	31533554	ENSG00000278977.1	-	TEC	KNOWN	RP1-41C23.2	1	1	0.659938
chr17	31534883	31534971	31534927	ENSG00000266459.1	+	miRNA	KNOWN	MIR4724	1	1	0.659938
chr17	31559996	31560083	31560039	ENSG00000207614.1	+	miRNA	KNOWN	MIR193A	1	1	0.590171
chr17	31560132	31560573	31560352	ENSG00000278546.1	+	lincRNA	KNOWN	RP1-41C23.4	1	1	0.590171
chr17	31563768	31563894	31563831	ENSG00000221038.1	-	snRNA	KNOWN	RNU6ATAC7P	1	1	0.590171
chr17	31571142	31575659	31573400	ENSG00000228768.1	+	lincRNA	KNOWN	AC003101.1	1	3	0.758254
chr17	31575269	31575358	31575313	ENSG00000265976.1	+	miRNA	KNOWN	MIR4725	1	1	0.758254
chr17	31575411	31575521	31575466	ENSG00000199187.1	+	miRNA	KNOWN	MIR365B	1	1	0.758254
chr17	31583162	31637543	31610352	ENSG00000266877.1	+	lincRNA	KNOWN	RP1-41C23.1	1	4	0.558193
chr17	31709568	31709859	31709713	ENSG00000266448.1	+	processed_pseudogene	KNOWN	RP11-805L22.1	1	1	0.557334
chr17	31713753	31713853	31713803	ENSG00000202026.1	+	snRNA	KNOWN	RNU6-1134P	1	1	0.237190
chr17	31759795	31761385	31760590	ENSG00000265863.1	+	processed_pseudogene	KNOWN	RP11-805L22.2	1	1	0.620686
chr17	31762440	31769048	31765744	ENSG00000263567.1	+	lincRNA	KNOWN	RP11-805L22.3	1	2	0.620686
chr17	31830731	31831750	31831240	ENSG00000265046.1	+	lincRNA	KNOWN	CTC-542B22.1	1	2	0.595054
chr17	31851864	31859337	31855600	ENSG00000172301.10	-	protein_coding	KNOWN	COPRS	5	5	0.691812
chr17	31860899	31901765	31881332	ENSG00000108651.9	-	protein_coding	KNOWN	UTP6	9	19	0.427801
chr17	31873926	31886666	31880296	ENSG00000263990.1	+	lincRNA	KNOWN	CTC-542B22.2	1	2	0.266388
chr17	31937018	32001045	31969031	ENSG00000178691.10	+	protein_coding	KNOWN	SUZ12	4	16	0.496970
chr17	31963805	31963933	31963869	ENSG00000253058.1	-	rRNA	KNOWN	RNA5SP437	1	1	0.493854
chr17	32003110	32006688	32004899	ENSG00000264300.1	-	transcribed_processed_pseudogene	KNOWN	RP11-640N20.1	2	2	0.499798
chr17	32007872	32053504	32030688	ENSG00000185158.12	+	protein_coding	KNOWN	LRRC37B	20	15	0.312447
chr17	32024469	32024583	32024526	ENSG00000264497.1	-	processed_pseudogene	KNOWN	RP11-640N20.5	1	1	0.334969
chr17	32039974	32042828	32041401	ENSG00000266777.1	+	transcribed_processed_pseudogene	KNOWN	SH3GL1P1	3	1	0.233766
chr17	32051030	32053208	32052119	ENSG00000278867.1	+	TEC	KNOWN	RP11-640N20.4	1	1	0.519204
chr17	32083179	32097065	32090122	ENSG00000264164.1	+	transcribed_processed_pseudogene	KNOWN	RP11-640N20.6	2	3	0.646977
chr17	32088160	32094933	32091546	ENSG00000266379.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-640N20.8	2	4	0.598895
chr17	32106330	32114125	32110227	ENSG00000263369.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-640N20.9	2	3	0.386375
chr17	32111562	32112590	32112076	ENSG00000265574.1	-	processed_pseudogene	KNOWN	WDR45BP1	1	1	0.250254
chr17	32127595	32128454	32128024	ENSG00000277511.1	+	lincRNA	KNOWN	CTD-2095E4.5	1	1	0.250254
chr17	32135729	32135814	32135771	ENSG00000263985.1	-	miRNA	NOVEL	AC116407.1	1	1	0.402332
chr17	32141226	32143135	32142180	ENSG00000214708.4	-	antisense	KNOWN	AC090616.2	1	2	0.402332
chr17	32142454	32253374	32197914	ENSG00000126858.16	+	protein_coding	KNOWN	RHOT1	17	21	0.460150
chr17	32150433	32151504	32150968	ENSG00000265293.2	-	processed_pseudogene	KNOWN	ARGFXP2	1	2	0.792432
chr17	32159311	32160371	32159841	ENSG00000280033.1	+	TEC	KNOWN	CTD-2095E4.3	1	1	0.792432
chr17	32178946	32180074	32179510	ENSG00000280020.1	-	TEC	KNOWN	CTD-2095E4.4	2	1	0.434273
chr17	32227890	32228108	32227999	ENSG00000266282.1	-	processed_pseudogene	KNOWN	UBL5P2	1	1	0.483822
chr17	32266176	32324661	32295418	ENSG00000141314.12	+	protein_coding	KNOWN	RHBDL3	6	9	0.654024
chr17	32280387	32280953	32280670	ENSG00000263674.1	-	antisense	KNOWN	RP11-443G13.2	1	2	0.662484
chr17	32324431	32360700	32342565	ENSG00000265794.5	+	processed_transcript	KNOWN	RP11-227G15.3	2	5	0.730920
chr17	32324565	32350023	32337294	ENSG00000108666.9	-	protein_coding	KNOWN	C17orf75	13	10	0.698406
chr17	32328441	32329395	32328918	ENSG00000265139.1	+	lincRNA	KNOWN	RP11-227G15.2	1	2	0.512835
chr17	32343774	32344124	32343949	ENSG00000263749.1	-	processed_pseudogene	KNOWN	OOSP1P2	1	1	0.748690
chr17	32350109	32350202	32350155	ENSG00000207928.1	+	miRNA	KNOWN	MIR632	1	1	0.811183
chr17	32350117	32381886	32366001	ENSG00000010244.16	+	protein_coding	KNOWN	ZNF207	17	14	0.644839
chr17	32408013	32408309	32408161	ENSG00000274341.1	+	lincRNA	KNOWN	RP11-227G15.10	1	1	0.556395
chr17	32410159	32410746	32410452	ENSG00000278668.1	+	lincRNA	KNOWN	RP11-227G15.11	1	1	0.367626
chr17	32411217	32412420	32411818	ENSG00000266385.1	+	lincRNA	KNOWN	RP11-227G15.8	1	2	0.367626
chr17	32423971	32446038	32435004	ENSG00000279762.3	-	antisense	KNOWN	RP11-227G15.12	2	3	0.225882
chr17	32430967	32432841	32431904	ENSG00000264083.1	+	lincRNA	KNOWN	RP11-227G15.9	1	2	0.172610
chr17	32434939	32435028	32434983	ENSG00000264373.1	-	processed_pseudogene	KNOWN	RP11-227G15.6	1	1	0.172610
chr17	32444261	32483318	32463789	ENSG00000108671.9	+	protein_coding	KNOWN	PSMD11	11	14	0.362264
chr17	32463374	32463482	32463428	ENSG00000202100.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.483501
chr17	32486619	32491256	32488937	ENSG00000176749.8	+	protein_coding	KNOWN	CDK5R1	3	3	0.338327
chr17	32492522	32877177	32684849	ENSG00000176658.16	-	protein_coding	KNOWN	MYO1D	16	24	0.139960
chr17	32495536	32499333	32497434	ENSG00000266718.1	+	antisense	KNOWN	RP11-466A19.1	1	2	0.543788
chr17	32504567	32505644	32505105	ENSG00000280245.1	-	TEC	KNOWN	RP11-466A19.4	1	1	0.543788
chr17	32509954	32523424	32516689	ENSG00000265222.1	-	sense_intronic	KNOWN	RP11-466A19.8	1	2	0.487482
chr17	32512869	32519350	32516109	ENSG00000263717.1	-	sense_intronic	KNOWN	RP11-466A19.6	1	2	0.487293
chr17	32518322	32518934	32518628	ENSG00000279781.1	-	TEC	KNOWN	RP11-466A19.7	1	1	0.487293
chr17	32518953	32531492	32525222	ENSG00000266599.1	+	antisense	KNOWN	RP11-466A19.3	1	2	0.498481
chr17	32529008	32530049	32529528	ENSG00000265337.1	-	sense_intronic	KNOWN	RP11-466A19.5	1	2	0.491806
chr17	32627739	32686484	32657111	ENSG00000264458.1	+	antisense	KNOWN	RP11-220C2.1	1	3	0.146673
chr17	32830219	32830329	32830274	ENSG00000201178.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.375785
chr17	32876759	32878637	32877698	ENSG00000226377.1	+	antisense	KNOWN	AC084809.2	1	3	0.425118
chr17	32905662	32906584	32906123	ENSG00000236377.1	+	lincRNA	KNOWN	AC084809.3	1	2	0.032182
chr17	32927910	32945106	32936508	ENSG00000006042.11	+	protein_coding	KNOWN	TMEM98	9	9	0.280053
chr17	32970376	32997877	32984126	ENSG00000141316.12	+	protein_coding	KNOWN	SPACA3	5	6	0.079031
chr17	33013087	34174964	33594025	ENSG00000108684.14	-	protein_coding	KNOWN	ASIC2	5	10	0.028547
chr17	33052107	33052867	33052487	ENSG00000264598.1	-	sense_intronic	KNOWN	RP1-29G21.1	1	2	0.049969
chr17	33099969	33100319	33100144	ENSG00000280349.1	-	TEC	KNOWN	RP11-40A13.2	1	1	-0.044213
chr17	33111858	33131743	33121800	ENSG00000266535.1	+	antisense	KNOWN	RP11-40A13.1	1	3	0.290183
chr17	33529787	33533760	33531773	ENSG00000265544.1	-	sense_intronic	KNOWN	AA06	1	3	0.091601
chr17	33534110	33541339	33537724	ENSG00000265697.1	+	antisense	KNOWN	RP11-31I22.4	1	2	0.084937
chr17	33565764	33624122	33594943	ENSG00000265125.5	+	antisense	KNOWN	RP11-31I22.3	3	4	-0.011048
chr17	33627027	33635057	33631042	ENSG00000265115.1	+	antisense	KNOWN	RP11-31I22.2	1	2	0.035775
chr17	33680577	33680883	33680730	ENSG00000264643.1	+	lincRNA	KNOWN	RP11-118G23.2	1	1	0.233238
chr17	33688803	33689174	33688988	ENSG00000265689.1	+	lincRNA	KNOWN	RP11-118G23.1	1	1	0.233238
chr17	33874318	33874458	33874388	ENSG00000221699.1	-	miRNA	NOVEL	AC024610.1	1	1	-0.085201
chr17	33931132	33936206	33933669	ENSG00000265356.1	-	sense_intronic	KNOWN	RP11-17M24.1	1	3	0.033693
chr17	33976531	33980851	33978691	ENSG00000263435.1	+	antisense	KNOWN	RP11-17M24.2	1	2	0.205054
chr17	34000789	34006772	34003780	ENSG00000279674.1	-	TEC	KNOWN	RP11-1086I4.2	1	1	-0.257158
chr17	34036681	34039872	34038276	ENSG00000226049.3	-	processed_pseudogene	KNOWN	TLK2P1	1	1	-0.091720
chr17	34069317	34071251	34070284	ENSG00000279668.1	-	TEC	KNOWN	CTC-304I17.1	1	1	-0.158937
chr17	34080882	34082224	34081553	ENSG00000263485.1	-	sense_intronic	KNOWN	CTC-304I17.4	1	2	-0.214255
chr17	34118347	34118882	34118614	ENSG00000265775.1	-	sense_intronic	KNOWN	CTC-304I17.3	1	1	-0.110501
chr17	34120056	34120167	34120111	ENSG00000252370.1	-	rRNA	KNOWN	RNA5SP438	1	1	-0.110501
chr17	34142947	34147047	34144997	ENSG00000264791.1	+	antisense	KNOWN	CTC-304I17.2	1	2	0.062697
chr17	34161737	34164251	34162994	ENSG00000263571.1	+	lincRNA	KNOWN	CTC-304I17.5	1	2	-0.044070
chr17	34169372	34195937	34182654	ENSG00000261156.6	-	lincRNA	KNOWN	RP11-215E13.1	3	6	0.134143
chr17	34174220	34174332	34174276	ENSG00000263383.2	+	miRNA	NOVEL	AC005549.1	1	1	0.154728
chr17	34176538	34178166	34177352	ENSG00000264990.1	+	lincRNA	KNOWN	RP11-215E13.2	1	1	0.154728
chr17	34183084	34183135	34183109	ENSG00000265501.1	-	miRNA	NOVEL	AC005549.2	1	1	0.154728
chr17	34255218	34257203	34256210	ENSG00000108691.9	+	protein_coding	KNOWN	CCL2	4	3	0.507029
chr17	34270221	34272242	34271231	ENSG00000108688.11	+	protein_coding	KNOWN	CCL7	3	3	-0.116761
chr17	34285668	34288334	34287001	ENSG00000172156.3	+	protein_coding	KNOWN	CCL11	1	3	-0.116761
chr17	34319036	34321402	34320219	ENSG00000108700.4	+	protein_coding	KNOWN	CCL8	1	3	0.042523
chr17	34331862	34332228	34332045	ENSG00000265614.1	-	processed_pseudogene	KNOWN	RP11-521P1.1	1	1	-0.231898
chr17	34356452	34358610	34357531	ENSG00000181374.7	+	protein_coding	KNOWN	CCL13	2	3	-0.302287
chr17	34360328	34363231	34361779	ENSG00000108702.3	-	protein_coding	KNOWN	CCL1	1	3	-0.302287
chr17	34479312	34479957	34479634	ENSG00000225582.1	+	lincRNA	KNOWN	AC011193.1	2	2	0.032010
chr17	34574123	34579369	34576746	ENSG00000197322.3	-	lincRNA	KNOWN	C17orf102	1	2	0.017644
chr17	34580749	34639318	34610033	ENSG00000181291.6	+	protein_coding	KNOWN	TMEM132E	3	10	0.346668
chr17	34614409	34614809	34614609	ENSG00000278860.1	+	TEC	KNOWN	RP11-28A22.2	1	1	0.540007
chr17	34725509	34726170	34725839	ENSG00000264174.1	-	lincRNA	KNOWN	RP11-212E8.1	1	1	-0.079620
chr17	34837871	34859046	34848458	ENSG00000264622.1	-	lincRNA	KNOWN	RP11-642M2.1	1	2	0.177250
chr17	34927859	34981078	34954468	ENSG00000132141.13	-	protein_coding	KNOWN	CCT6B	5	14	-0.103462
chr17	34961530	34963775	34962652	ENSG00000198783.5	+	protein_coding	KNOWN	ZNF830	2	2	0.144143
chr17	34980494	35009743	34995118	ENSG00000005156.11	+	protein_coding	KNOWN	LIG3	16	20	0.377742
chr17	35005990	35089319	35047654	ENSG00000092871.16	-	protein_coding	KNOWN	RFFL	12	8	0.340902
chr17	35011349	35121493	35066421	ENSG00000267618.5	-	protein_coding	KNOWN	RAD51L3-RFFL	3	9	0.304240
chr17	35018660	35018991	35018825	ENSG00000273687.1	+	antisense	KNOWN	RP5-837J1.6	1	1	0.519002
chr17	35073831	35074374	35074102	ENSG00000267457.1	-	lincRNA	KNOWN	RP5-837J1.4	1	1	0.491163
chr17	35076737	35077007	35076872	ENSG00000243423.1	+	processed_pseudogene	KNOWN	RP5-837J1.1	1	1	0.491163
chr17	35092208	35121522	35106865	ENSG00000185379.20	-	protein_coding	KNOWN	RAD51D	23	11	0.243132
chr17	35097560	35097657	35097608	ENSG00000252328.1	-	misc_RNA	NOVEL	Vault	1	1	0.216250
chr17	35121579	35130732	35126155	ENSG00000073598.5	+	protein_coding	KNOWN	FNDC8	1	4	0.303738
chr17	35128753	35142315	35135534	ENSG00000073536.17	-	protein_coding	KNOWN	NLE1	7	13	0.501236
chr17	35147817	35189345	35168581	ENSG00000141161.11	+	protein_coding	KNOWN	UNC45B	3	20	0.329563
chr17	35164243	35167012	35165627	ENSG00000267782.1	-	antisense	KNOWN	RP11-799D4.3	1	2	0.191039
chr17	35188522	35191343	35189932	ENSG00000266981.1	+	processed_transcript	KNOWN	RP11-799D4.2	1	2	0.388586
chr17	35190961	35191702	35191331	ENSG00000267744.1	+	transcribed_processed_pseudogene	KNOWN	RP11-799D4.1	1	1	0.320066
chr17	35192520	35194523	35193521	ENSG00000164729.7	-	protein_coding	KNOWN	SLC35G3	1	1	0.320066
chr17	35231450	35242963	35237206	ENSG00000266947.1	-	antisense	KNOWN	RP11-799D4.4	2	2	-0.088043
chr17	35243036	35273655	35258345	ENSG00000166750.9	+	protein_coding	KNOWN	SLFN5	3	5	0.353235
chr17	35313502	35324900	35319201	ENSG00000267364.1	+	lincRNA	KNOWN	RP11-47L3.1	2	4	0.214198
chr17	35344231	35344564	35344397	ENSG00000267271.1	+	processed_pseudogene	KNOWN	RP11-686D22.2	1	1	-0.461944
chr17	35350305	35373701	35362003	ENSG00000172716.16	-	protein_coding	KNOWN	SLFN11	13	7	0.184375
chr17	35377416	35377678	35377547	ENSG00000267315.1	-	processed_pseudogene	KNOWN	RP11-686D22.6	1	1	-0.088043
chr17	35400878	35403006	35401942	ENSG00000267711.1	-	lincRNA	KNOWN	RP11-686D22.5	1	2	0.002724
chr17	35403837	35404373	35404105	ENSG00000267547.1	-	lincRNA	KNOWN	RP11-686D22.4	1	1	0.002724
chr17	35406684	35409768	35408226	ENSG00000267745.1	-	processed_transcript	KNOWN	RP11-686D22.8	1	2	0.002724
chr17	35406948	35407818	35407383	ENSG00000267648.1	-	transcribed_processed_pseudogene	KNOWN	RP11-686D22.3	1	1	0.002724
chr17	35409602	35410228	35409915	ENSG00000267102.1	-	transcribed_processed_pseudogene	KNOWN	RP11-686D22.7	1	1	0.060449
chr17	35411060	35433283	35422171	ENSG00000172123.12	-	protein_coding	KNOWN	SLFN12	8	6	0.165021
chr17	35435096	35448837	35441966	ENSG00000154760.13	-	protein_coding	KNOWN	SLFN13	11	7	0.190958
chr17	35459481	35460550	35460015	ENSG00000267312.1	-	processed_pseudogene	KNOWN	RP11-1094M14.7	1	1	0.116514
chr17	35464249	35537861	35501055	ENSG00000205045.8	-	protein_coding	KNOWN	SLFN12L	5	5	0.164573
chr17	35470069	35470628	35470348	ENSG00000267554.1	-	processed_pseudogene	KNOWN	RP11-686D22.10	1	1	0.083059
chr17	35477994	35478444	35478219	ENSG00000267349.1	+	antisense	KNOWN	RP11-686D22.9	1	1	0.083059
chr17	35490009	35491238	35490623	ENSG00000267046.1	+	processed_pseudogene	KNOWN	E2F3P1	1	1	0.288684
chr17	35498218	35499175	35498696	ENSG00000267369.1	+	processed_pseudogene	KNOWN	RP11-1094M14.8	1	1	0.288684
chr17	35499690	35510270	35504980	ENSG00000267074.1	-	sense_intronic	KNOWN	RP11-1094M14.5	1	3	0.283846
chr17	35514766	35515186	35514976	ENSG00000255987.1	-	processed_pseudogene	KNOWN	TOMM20P2	1	1	0.099811
chr17	35540039	35540797	35540418	ENSG00000267035.1	-	lincRNA	KNOWN	RP11-1094M14.10	1	2	0.256111
chr17	35548125	35558098	35553111	ENSG00000236320.3	-	protein_coding	KNOWN	SLFN14	1	4	0.199800
chr17	35553205	35554767	35553986	ENSG00000267359.1	+	antisense	KNOWN	RP11-1094M14.12	1	2	0.186770
chr17	35561539	35562077	35561808	ENSG00000267625.1	-	lincRNA	KNOWN	RP11-1094M14.14	1	2	0.186770
chr17	35566517	35566672	35566594	ENSG00000242660.1	+	processed_pseudogene	KNOWN	RP11-1094M14.1	1	1	0.186770
chr17	35568120	35574792	35571456	ENSG00000267321.1	+	lincRNA	KNOWN	RP11-1094M14.11	1	2	0.342607
chr17	35573657	35573753	35573705	ENSG00000207297.1	+	snoRNA	KNOWN	SNORD7	1	1	0.403700
chr17	35574795	35578863	35576829	ENSG00000108733.9	-	protein_coding	KNOWN	PEX12	4	3	0.403700
chr17	35578046	35726409	35652227	ENSG00000006125.16	+	protein_coding	KNOWN	AP2B1	22	22	0.277304
chr17	35596904	35597128	35597016	ENSG00000267592.1	-	processed_pseudogene	KNOWN	CTC-507E2.2	1	1	0.463551
chr17	35713791	35864615	35789203	ENSG00000270647.5	+	protein_coding	KNOWN	TAF15	15	19	0.586789
chr17	35731649	35743521	35737585	ENSG00000270885.1	+	protein_coding	KNOWN	RASL10B	2	4	0.622507
chr17	35744511	35752878	35748694	ENSG00000270765.5	-	protein_coding	KNOWN	GAS2L2	3	7	0.676452
chr17	35756249	35795707	35775978	ENSG00000271447.5	-	protein_coding	KNOWN	MMP28	7	9	0.801544
chr17	35757199	35758325	35757762	ENSG00000271392.1	-	sense_intronic	KNOWN	RP1-161P9.5	1	2	0.779282
chr17	35760897	35765079	35762988	ENSG00000270806.1	+	protein_coding	KNOWN	C17orf50	3	3	0.779282
chr17	35808489	35808897	35808693	ENSG00000270829.1	-	lincRNA	KNOWN	AC015849.12	1	1	0.333000
chr17	35816717	35830293	35823505	ENSG00000270871.1	-	antisense	KNOWN	AC015849.19	1	2	0.589215
chr17	35818399	35823713	35821056	ENSG00000270894.1	+	sense_overlapping	KNOWN	AC015849.13	1	2	0.591094
chr17	35854946	35868891	35861918	ENSG00000270379.5	-	protein_coding	KNOWN	HEATR9	8	16	0.697213
chr17	35861093	35861566	35861329	ENSG00000271268.1	-	processed_pseudogene	KNOWN	AC015849.14	1	1	0.697213
chr17	35868967	35885863	35877415	ENSG00000270240.2	+	antisense	KNOWN	AC015849.2	2	5	0.302415
chr17	35871491	35880793	35876142	ENSG00000271503.5	-	protein_coding	KNOWN	CCL5	3	4	0.276732
chr17	35889558	35889804	35889681	ENSG00000271394.1	+	misc_RNA	NOVEL	7SK	1	1	0.276732
chr17	35893707	35911023	35902365	ENSG00000270977.1	-	lincRNA	KNOWN	AC015849.16	2	2	0.439539
chr17	35912635	35918010	35915322	ENSG00000271013.1	-	processed_pseudogene	KNOWN	LRRC37A9P	1	1	0.200516
chr17	35918066	35930773	35924419	ENSG00000278023.4	-	protein_coding	KNOWN	RDM1	14	7	0.182239
chr17	35934518	35943699	35939108	ENSG00000275722.4	-	protein_coding	KNOWN	LYZL6	3	5	-0.099540
chr17	35963488	35965472	35964480	ENSG00000273736.1	-	transcribed_unprocessed_pseudogene	KNOWN	CTB-186H2.2	2	2	-0.418203
chr17	35976493	35981496	35978994	ENSG00000275152.4	-	protein_coding	KNOWN	CCL16	3	5	-0.064127
chr17	35983291	35987004	35985147	ENSG00000276409.4	-	protein_coding	KNOWN	CCL14	4	4	-0.064127
chr17	35983656	36001621	35992638	ENSG00000275688.4	-	protein_coding	KNOWN	CCL15-CCL14	2	8	0.080288
chr17	35983656	35990270	35986963	ENSG00000275431.1	+	antisense	KNOWN	CTB-186H2.3	2	2	-0.054980
chr17	35996440	36002038	35999239	ENSG00000275718.1	-	protein_coding	KNOWN	CCL15	2	4	0.159106
chr17	36001419	36011618	36006518	ENSG00000275944.1	+	antisense	KNOWN	RP11-104J23.1	2	2	0.122912
chr17	36012504	36012891	36012697	ENSG00000278690.1	+	lincRNA	KNOWN	RP11-104J23.2	1	1	-0.068899
chr17	36013056	36017968	36015512	ENSG00000274736.4	-	protein_coding	KNOWN	CCL23	3	4	-0.068899
chr17	36064280	36072032	36068156	ENSG00000275385.1	+	protein_coding	KNOWN	CCL18	2	3	-0.068761
chr17	36072866	36090134	36081500	ENSG00000277089.4	+	antisense	KNOWN	AC069363.1	4	5	-0.278675
chr17	36088256	36090169	36089212	ENSG00000277632.1	-	protein_coding	KNOWN	CCL3	3	3	-0.242413
chr17	36103590	36105621	36104605	ENSG00000275302.1	+	protein_coding	KNOWN	CCL4	3	3	0.165241
chr17	36110150	36110447	36110298	ENSG00000276014.1	+	misc_RNA	KNOWN	RN7SL301P	1	1	0.076562
chr17	36116177	36177510	36146843	ENSG00000276241.1	+	antisense	KNOWN	CTB-91J4.1	2	3	0.009083
chr17	36161607	36162926	36162266	ENSG00000282738.1	+	unprocessed_pseudogene	KNOWN	RP11-428O23.1	1	2	-0.219210
chr17	36165624	36264527	36215075	ENSG00000274808.4	-	protein_coding	KNOWN	TBC1D3B	5	14	0.149656
chr17	36183235	36196471	36189853	ENSG00000274767.1	+	antisense	KNOWN	AC131056.3	3	3	0.406236
chr17	36194869	36196758	36195813	ENSG00000276085.1	-	protein_coding	KNOWN	CCL3L3	3	3	0.264631
chr17	36210924	36212878	36211901	ENSG00000276070.4	+	protein_coding	KNOWN	CCL4L2	10	3	-0.030691
chr17	36225246	36226807	36226026	ENSG00000278097.1	-	lincRNA	KNOWN	AC131056.5	1	2	-0.030691
chr17	36234447	36234554	36234500	ENSG00000276755.1	-	unprocessed_pseudogene	KNOWN	RP11-893G17.4	1	1	-0.063426
chr17	36241701	36241806	36241753	ENSG00000278395.1	+	unprocessed_pseudogene	KNOWN	AC131056.6	1	1	-0.063426
chr17	36253456	36264553	36259004	ENSG00000274933.5	-	protein_coding	KNOWN	TBC1D3I	3	14	0.104323
chr17	36274191	36320547	36297369	ENSG00000261499.2	+	unprocessed_pseudogene	KNOWN	CH17-260O16.1	1	11	-0.002953
chr17	36285312	36285413	36285362	ENSG00000265889.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.322373
chr17	36323884	36334759	36329321	ENSG00000260287.4	+	protein_coding	KNOWN	TBC1D3G	1	14	0.057492
chr17	36377531	36388423	36382977	ENSG00000274226.5	-	protein_coding	KNOWN	TBC1D3H	1	14	0.199733
chr17	36404826	36404932	36404879	ENSG00000277029.1	-	snRNA	KNOWN	RNU6-1192P	1	1	0.485984
chr17	36428618	36439566	36434092	ENSG00000275954.5	-	protein_coding	KNOWN	TBC1D3F	1	14	0.614266
chr17	36450146	36457535	36453840	ENSG00000274658.1	-	unprocessed_pseudogene	KNOWN	TBC1D3J	1	11	0.272113
chr17	36486629	36499310	36492969	ENSG00000273611.4	+	protein_coding	KNOWN	ZNHIT3	12	5	0.431001
chr17	36491199	36491322	36491260	ENSG00000274164.1	-	rRNA	KNOWN	RNA5SP439	1	1	0.548506
chr17	36495633	36543435	36519534	ENSG00000278259.4	-	protein_coding	KNOWN	MYO19	27	27	0.627473
chr17	36535020	36539310	36537165	ENSG00000277161.1	+	protein_coding	KNOWN	PIGW	3	2	0.534350
chr17	36544888	36589848	36567368	ENSG00000278311.4	+	protein_coding	KNOWN	GGNBP2	9	14	0.407560
chr17	36574462	36575325	36574893	ENSG00000274756.1	-	processed_pseudogene	KNOWN	CTB-75G16.1	1	1	0.417478
chr17	36591798	36600806	36596302	ENSG00000278535.4	+	protein_coding	KNOWN	DHRS11	8	7	0.403453
chr17	36601572	36608971	36605271	ENSG00000278619.4	+	protein_coding	KNOWN	MRM1	2	5	0.403453
chr17	36634069	36634698	36634383	ENSG00000275720.1	+	lincRNA	KNOWN	CTB-75G16.3	1	1	0.473671
chr17	36684754	36685129	36684941	ENSG00000276508.1	+	lincRNA	KNOWN	CTD-3194G12.1	1	1	0.384928
chr17	36722583	36726340	36724461	ENSG00000275613.1	+	lincRNA	KNOWN	CTD-3194G12.2	1	3	0.193530
chr17	36861674	36936661	36899167	ENSG00000277268.1	-	antisense	KNOWN	RP11-445F12.1	4	4	0.299394
chr17	36936785	36944612	36940698	ENSG00000273706.4	+	protein_coding	KNOWN	LHX1	5	5	0.532564
chr17	36940049	36943456	36941752	ENSG00000276707.1	-	antisense	KNOWN	RP11-445F12.2	1	2	0.532564
chr17	36948875	37056871	37002873	ENSG00000275700.4	+	protein_coding	KNOWN	AATF	9	12	0.141275
chr17	36980167	36980422	36980294	ENSG00000277911.1	+	sense_intronic	KNOWN	RP11-333J10.2	1	1	-0.151934
chr17	36998598	37000034	36999316	ENSG00000277589.1	+	sense_intronic	KNOWN	RP11-333J10.3	1	2	0.125741
chr17	37033745	37033813	37033779	ENSG00000276326.1	+	miRNA	KNOWN	MIR2909	1	1	0.296531
chr17	37034668	37043252	37038960	ENSG00000277579.1	+	sense_intronic	KNOWN	CTC-268N12.3	1	2	0.296531
chr17	37045462	37052775	37049118	ENSG00000278638.1	-	antisense	KNOWN	CTC-268N12.2	1	3	0.397310
chr17	37084988	37406818	37245903	ENSG00000278540.4	-	protein_coding	KNOWN	ACACA	23	56	0.252974
chr17	37140611	37141424	37141017	ENSG00000274308.1	-	processed_pseudogene	KNOWN	RP11-19G24.1	1	1	0.145290
chr17	37143607	37144463	37144035	ENSG00000275029.1	-	transcribed_processed_pseudogene	KNOWN	HMGB1P24	2	1	0.145290
chr17	37162616	37163139	37162877	ENSG00000276810.1	+	processed_pseudogene	KNOWN	RP11-19G24.2	1	1	0.343176
chr17	37314341	37314439	37314390	ENSG00000278660.1	+	miRNA	NOVEL	AC243654.1	1	1	0.375490
chr17	37375986	37392708	37384347	ENSG00000278505.4	+	protein_coding	KNOWN	C17orf78	2	7	0.600878
chr17	37386886	37387926	37387406	ENSG00000276054.1	+	sense_intronic	KNOWN	RP11-378E13.3	1	2	0.641765
chr17	37406874	37479730	37443302	ENSG00000276234.4	+	protein_coding	KNOWN	TADA2A	16	17	0.417820
chr17	37407936	37408594	37408265	ENSG00000273965.1	-	antisense	KNOWN	RP11-378E13.4	1	2	0.389378
chr17	37454171	37454931	37454551	ENSG00000275839.1	+	processed_pseudogene	KNOWN	CTC-421K24.1	1	2	0.347249
chr17	37489831	37513501	37501666	ENSG00000276023.4	+	protein_coding	KNOWN	DUSP14	3	3	0.687628
chr17	37514797	37609496	37562146	ENSG00000275066.4	-	protein_coding	KNOWN	SYNRG	16	22	0.359061
chr17	37609739	37613841	37611790	ENSG00000277688.1	+	antisense	KNOWN	RP11-697E22.1	1	2	0.200241
chr17	37609739	37643464	37626601	ENSG00000278053.4	-	protein_coding	KNOWN	DDX52	8	16	0.296726
chr17	37614931	37615039	37614985	ENSG00000274620.1	-	miRNA	KNOWN	MIR378J	1	1	0.211291
chr17	37642947	37684252	37663599	ENSG00000277501.1	+	antisense	KNOWN	RP11-697E22.2	2	2	0.274370
chr17	37649133	37650894	37650013	ENSG00000274244.1	+	lincRNA	KNOWN	RP11-697E22.3	1	2	0.290690
chr17	37686432	37745247	37715839	ENSG00000275410.4	-	protein_coding	KNOWN	HNF1B	7	9	0.425386
chr17	37798894	37802788	37800841	ENSG00000275173.1	-	lincRNA	KNOWN	AC091199.1	1	3	0.076310
chr17	37828305	37884743	37856524	ENSG00000276715.4	-	transcribed_unprocessed_pseudogene	KNOWN	YWHAEP7	3	7	0.197180
chr17	37907957	37908063	37908010	ENSG00000277341.1	+	snRNA	KNOWN	RNU6-489P	1	1	0.056013
chr17	37924415	37935365	37929890	ENSG00000273513.1	+	protein_coding	KNOWN	TBC1D3K	1	14	0.347590
chr17	37940704	37940790	37940747	ENSG00000277488.1	-	rRNA	NOVEL	5S_rRNA	1	1	0.695333
chr17	37977972	38068651	38023311	ENSG00000274512.4	-	protein_coding	KNOWN	TBC1D3L	3	14	0.141275
chr17	37978470	38068592	38023531	ENSG00000278299.4	-	protein_coding	KNOWN	TBC1D3C	2	14	0.141932
chr17	38003976	38139051	38071513	ENSG00000274419.5	+	protein_coding	KNOWN	TBC1D3D	2	14	0.144390
chr17	38005561	38138862	38072211	ENSG00000278599.4	+	protein_coding	KNOWN	TBC1D3E	2	14	0.142489
chr17	38078262	38124770	38101516	ENSG00000274615.1	+	unprocessed_pseudogene	KNOWN	CH17-258A22.4	1	11	0.090237
chr17	38089399	38089500	38089449	ENSG00000275006.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.341164
chr17	38144201	38144287	38144244	ENSG00000274663.1	-	rRNA	NOVEL	5S_rRNA	1	1	0.479224
chr17	38181659	38192541	38187100	ENSG00000274611.3	-	protein_coding	KNOWN	TBC1D3	1	14	0.087677
chr17	38195740	38257152	38226446	ENSG00000274487.1	-	unprocessed_pseudogene	KNOWN	CH17-431G21.1	1	12	0.038438
chr17	38231043	38231144	38231093	ENSG00000274284.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.057582
chr17	38297023	38323218	38310120	ENSG00000278845.4	+	protein_coding	KNOWN	MRPL45	2	8	0.464617
chr17	38325530	38343847	38334688	ENSG00000277399.4	-	protein_coding	KNOWN	GPR179	4	11	0.962111
chr17	38352228	38405593	38378910	ENSG00000274211.4	+	protein_coding	KNOWN	SOCS7	4	10	0.644932
chr17	38419280	38512392	38465836	ENSG00000275832.4	+	protein_coding	KNOWN	ARHGAP23	12	25	1.219466
chr17	38450394	38452444	38451419	ENSG00000276170.4	-	processed_transcript	KNOWN	AC124789.1	6	4	1.334450
chr17	38530016	38605930	38567973	ENSG00000277363.4	-	protein_coding	KNOWN	SRCIN1	9	20	1.096226
chr17	38601049	38602701	38601875	ENSG00000274996.1	+	antisense	KNOWN	CTB-58E17.2	1	2	0.944093
chr17	38671703	38675421	38673562	ENSG00000273604.1	-	protein_coding	KNOWN	C17orf96	1	1	0.875180
chr17	38702262	38702331	38702296	ENSG00000275238.1	-	miRNA	KNOWN	MIR4734	1	1	1.023279
chr17	38702452	38704747	38703599	ENSG00000277969.1	+	lincRNA	KNOWN	CTB-58E17.1	1	1	1.023279
chr17	38703480	38706261	38704870	ENSG00000275532.1	-	antisense	KNOWN	CTB-58E17.3	1	2	1.023279
chr17	38705542	38729803	38717672	ENSG00000275023.4	+	protein_coding	KNOWN	MLLT6	11	20	1.273929
chr17	38715328	38720272	38717800	ENSG00000275665.1	-	antisense	KNOWN	CTB-58E17.9	1	5	1.330339
chr17	38719691	38719748	38719719	ENSG00000273627.1	+	miRNA	KNOWN	MIR4726	1	1	1.330339
chr17	38727833	38728198	38728015	ENSG00000279119.1	-	protein_coding	KNOWN	AC006449.2	1	1	1.330339
chr17	38730235	38735044	38732639	ENSG00000277972.1	+	protein_coding	KNOWN	CISD3	3	4	1.400482
chr17	38731802	38731920	38731861	ENSG00000276036.1	-	rRNA	KNOWN	RNA5SP440	1	1	1.400482
chr17	38733897	38749817	38741857	ENSG00000277258.4	-	protein_coding	KNOWN	PCGF2	7	12	1.400482
chr17	38749360	38751457	38750408	ENSG00000277182.1	+	antisense	KNOWN	CTB-58E17.5	1	1	1.298960
chr17	38752736	38764231	38758483	ENSG00000277791.4	+	protein_coding	KNOWN	PSMB3	6	6	1.254466
chr17	38755279	38755400	38755339	ENSG00000274607.1	-	snRNA	KNOWN	RNU6-866P	1	1	1.254466
chr17	38765689	38800126	38782907	ENSG00000276293.4	-	protein_coding	KNOWN	PIP4K2B	4	10	0.902124
chr17	38800434	38825481	38812957	ENSG00000273559.4	-	protein_coding	KNOWN	CWC25	7	11	0.837656
chr17	38825838	38825892	38825865	ENSG00000274054.1	+	miRNA	KNOWN	MIR4727	1	1	0.908029
chr17	38835088	38841455	38838271	ENSG00000275489.1	-	protein_coding	KNOWN	C17orf98	1	3	1.020099
chr17	38847865	38853843	38850854	ENSG00000125691.12	-	protein_coding	KNOWN	RPL23	11	6	0.965360
chr17	38851524	38851659	38851591	ENSG00000252699.1	-	snoRNA	NOVEL	SNORA21	1	1	0.934971
chr17	38852863	38852994	38852928	ENSG00000199293.1	-	snoRNA	KNOWN	SNORA21	1	1	0.934971
chr17	38855314	38855670	38855492	ENSG00000244086.1	+	processed_pseudogene	KNOWN	RPS20P35	1	1	0.934971
chr17	38869859	38921770	38895814	ENSG00000002834.17	+	protein_coding	KNOWN	LASP1	9	8	1.044146
chr17	38903704	38904600	38904152	ENSG00000263466.1	-	antisense	KNOWN	RP1-56K13.2	1	2	0.996067
chr17	38914979	38915042	38915010	ENSG00000277057.1	+	miRNA	KNOWN	MIR6779	1	1	0.964935
chr17	38918801	38921769	38920285	ENSG00000265784.1	-	antisense	KNOWN	RP1-56K13.3	1	2	0.964935
chr17	38925168	38928057	38926612	ENSG00000263874.1	+	lincRNA	KNOWN	LINC00672	1	2	0.964935
chr17	38936432	38967402	38951917	ENSG00000204952.2	-	protein_coding	KNOWN	FBXO47	1	11	0.455573
chr17	38996323	38996624	38996473	ENSG00000265428.1	-	processed_pseudogene	KNOWN	RP1-56K13.6	1	1	0.742153
chr17	39003248	39013032	39008140	ENSG00000266588.1	-	lincRNA	KNOWN	RP1-56K13.5	2	3	0.681714
chr17	39023394	39026742	39025068	ENSG00000277426.1	+	unprocessed_pseudogene	KNOWN	CTD-2206N4.5	1	2	0.547186
chr17	39026715	39027110	39026912	ENSG00000266013.1	-	lincRNA	KNOWN	CTD-2206N4.2	1	2	0.547186
chr17	39027277	39053205	39040241	ENSG00000214553.9	+	transcribed_unprocessed_pseudogene	KNOWN	LRRC37A11P	2	12	0.427289
chr17	39033926	39034042	39033984	ENSG00000266048.1	-	processed_pseudogene	KNOWN	CTD-2206N4.1	1	1	0.337569
chr17	39047468	39047576	39047522	ENSG00000277021.1	+	miRNA	NOVEL	AC091178.2	1	1	0.337569
chr17	39057019	39113190	39085104	ENSG00000263818.5	+	transcribed_processed_pseudogene	KNOWN	CTD-2206N4.4	4	5	0.834744
chr17	39063303	39154394	39108848	ENSG00000161381.13	-	protein_coding	KNOWN	PLXDC1	20	15	0.770412
chr17	39081065	39081187	39081126	ENSG00000222494.1	+	miRNA	NOVEL	AC091178.1	1	1	0.898195
chr17	39156894	39167484	39162189	ENSG00000141748.12	-	protein_coding	KNOWN	ARL5C	5	6	0.796915
chr17	39165073	39167849	39166461	ENSG00000280177.1	+	TEC	KNOWN	RP5-906A24.1	1	1	0.796915
chr17	39173290	39177503	39175396	ENSG00000266101.1	+	antisense	KNOWN	RP5-906A24.2	1	2	1.155002
chr17	39173456	39197703	39185579	ENSG00000067191.15	-	protein_coding	KNOWN	CACNB1	12	14	1.147465
chr17	39200283	39204727	39202505	ENSG00000108298.9	+	protein_coding	KNOWN	RPL19	8	6	1.131281
chr17	39210536	39225872	39218204	ENSG00000141750.6	-	protein_coding	KNOWN	STAC2	2	11	0.979965
chr17	39238466	39250818	39244642	ENSG00000265460.6	+	transcribed_processed_pseudogene	KNOWN	RP11-690G19.4	2	11	1.085207
chr17	39252644	39402523	39327583	ENSG00000108306.11	-	protein_coding	KNOWN	FBXL20	5	16	0.521344
chr17	39297405	39297489	39297447	ENSG00000265904.1	-	miRNA	NOVEL	AC005288.1	1	1	0.513572
chr17	39401793	39406233	39404013	ENSG00000266469.1	+	antisense	KNOWN	CTB-131K11.1	1	2	0.450252
chr17	39404285	39451286	39427785	ENSG00000125686.11	-	protein_coding	KNOWN	MED1	5	18	0.660002
chr17	39461511	39564907	39513209	ENSG00000167258.13	+	protein_coding	KNOWN	CDK12	10	14	0.625953
chr17	39482486	39482590	39482538	ENSG00000223091.1	-	snRNA	KNOWN	RNU6-981P	1	1	0.792432
chr17	39546104	39546244	39546174	ENSG00000222777.1	-	snRNA	KNOWN	RNU6-233P	1	1	0.604198
chr17	39566915	39567559	39567237	ENSG00000273576.1	+	lincRNA	KNOWN	RP11-390P24.1	1	1	0.614833
chr17	39603536	39609777	39606656	ENSG00000171532.4	-	protein_coding	KNOWN	NEUROD2	2	2	0.623087
chr17	39619613	39622513	39621063	ENSG00000214546.3	+	lincRNA	KNOWN	AC087491.2	1	4	0.928139
chr17	39626740	39636626	39631683	ENSG00000131771.13	+	protein_coding	KNOWN	PPP1R1B	10	8	0.951894
chr17	39637065	39663484	39650274	ENSG00000131748.15	+	protein_coding	KNOWN	STARD3	29	15	0.930216
chr17	39664187	39666555	39665371	ENSG00000173991.5	+	protein_coding	KNOWN	TCAP	2	3	0.898220
chr17	39667981	39670475	39669228	ENSG00000141744.3	+	protein_coding	KNOWN	PNMT	3	3	0.949399
chr17	39671122	39696797	39683959	ENSG00000161395.12	-	protein_coding	KNOWN	PGAP3	12	10	1.080020
chr17	39687914	39730426	39709170	ENSG00000141736.13	+	protein_coding	KNOWN	ERBB2	22	31	1.152315
chr17	39726495	39726561	39726528	ENSG00000265178.1	+	miRNA	KNOWN	MIR4728	1	1	1.463248
chr17	39728496	39730787	39729641	ENSG00000141741.11	-	protein_coding	KNOWN	MIEN1	6	4	1.351252
chr17	39737927	39747291	39742609	ENSG00000141738.13	+	protein_coding	KNOWN	GRB7	14	15	1.137634
chr17	39757715	39864188	39810951	ENSG00000161405.16	-	protein_coding	KNOWN	IKZF3	17	9	0.442013
chr17	39835037	39836080	39835558	ENSG00000264663.1	-	processed_pseudogene	KNOWN	KRT8P34	1	1	0.390073
chr17	39839369	39839524	39839446	ENSG00000226117.1	-	processed_pseudogene	KNOWN	AC079199.2	1	1	0.390073
chr17	39868164	39877896	39873030	ENSG00000186075.12	+	protein_coding	KNOWN	ZPBP2	4	8	0.412064
chr17	39904595	39919854	39912224	ENSG00000073605.18	-	protein_coding	KNOWN	GSDMB	15	11	0.594284
chr17	39921041	39927601	39924321	ENSG00000172057.9	-	protein_coding	KNOWN	ORMDL3	8	6	0.786366
chr17	39927742	39939601	39933671	ENSG00000264968.1	+	lincRNA	KNOWN	RP11-387H17.4	3	5	1.044793
chr17	39941474	39944747	39943110	ENSG00000204913.5	+	protein_coding	KNOWN	LRRC3C	1	2	1.105538
chr17	39962973	39977766	39970369	ENSG00000167914.10	+	protein_coding	KNOWN	GSDMA	2	12	1.117521
chr17	39980797	39997960	39989378	ENSG00000108344.14	+	protein_coding	KNOWN	PSMD3	5	13	1.031573
chr17	40012226	40014705	40013465	ENSG00000265799.1	-	lincRNA	KNOWN	RP11-387H17.6	2	3	0.825712
chr17	40015361	40017813	40016587	ENSG00000108342.12	+	protein_coding	KNOWN	CSF3	9	5	0.825712
chr17	40019097	40061215	40040156	ENSG00000008838.17	-	protein_coding	KNOWN	MED24	34	26	0.881629
chr17	40026332	40026409	40026370	ENSG00000275267.1	-	miRNA	KNOWN	MIR6884	1	1	0.825712
chr17	40027542	40027645	40027593	ENSG00000238793.1	-	snoRNA	KNOWN	SNORD124	1	1	0.825712
chr17	40058290	40093867	40076078	ENSG00000126351.12	+	protein_coding	KNOWN	THRA	10	10	1.014603
chr17	40092787	40100725	40096756	ENSG00000126368.5	-	protein_coding	KNOWN	NR1D1	1	8	1.295275
chr17	40113215	40115442	40114328	ENSG00000279199.1	-	TEC	KNOWN	RP11-749I16.3	1	1	1.061979
chr17	40122298	40136916	40129607	ENSG00000188895.11	+	protein_coding	KNOWN	MSL1	11	10	1.089102
chr17	40140318	40172183	40156250	ENSG00000108349.14	+	protein_coding	KNOWN	CASC3	10	14	0.981894
chr17	40150136	40150222	40150179	ENSG00000221555.1	+	miRNA	NOVEL	AC068669.1	1	1	0.915114
chr17	40177010	40195656	40186333	ENSG00000108352.11	+	protein_coding	KNOWN	RAPGEFL1	12	15	1.043045
chr17	40193597	40193663	40193630	ENSG00000274621.1	+	miRNA	KNOWN	MIR6867	1	1	1.177811
chr17	40219304	40284136	40251720	ENSG00000171475.13	+	protein_coding	KNOWN	WIPF2	10	8	0.763890
chr17	40287633	40304657	40296145	ENSG00000094804.9	+	protein_coding	KNOWN	CDC6	5	12	0.739115
chr17	40309192	40357643	40333417	ENSG00000131759.17	+	protein_coding	KNOWN	RARA	10	9	1.062784
chr17	40340867	40343136	40342001	ENSG00000265666.1	-	antisense	KNOWN	RARA-AS1	1	3	1.307969
chr17	40348049	40350539	40349294	ENSG00000278918.1	-	TEC	KNOWN	CTD-2267D19.1	1	1	1.271329
chr17	40360655	40364693	40362674	ENSG00000266208.1	+	antisense	KNOWN	CTD-2267D19.3	1	2	1.139017
chr17	40362931	40363815	40363373	ENSG00000183153.6	-	protein_coding	KNOWN	GJD3	1	1	1.139017
chr17	40367952	40368438	40368195	ENSG00000264655.1	+	processed_pseudogene	KNOWN	CTD-2267D19.4	1	1	1.139017
chr17	40374089	40374176	40374132	ENSG00000252618.1	+	rRNA	KNOWN	RNA5SP441	1	1	0.921006
chr17	40380666	40381838	40381252	ENSG00000278346.1	-	processed_pseudogene	KNOWN	CTD-2267D19.7	1	2	0.921006
chr17	40388516	40417950	40403233	ENSG00000131747.14	-	protein_coding	KNOWN	TOP2A	5	35	0.537430
chr17	40391232	40391338	40391285	ENSG00000222881.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.638986
chr17	40439467	40439917	40439692	ENSG00000240125.1	-	processed_pseudogene	KNOWN	RPL23AP75	1	1	0.633562
chr17	40443461	40457731	40450596	ENSG00000141753.6	+	protein_coding	KNOWN	IGFBP4	1	4	0.955493
chr17	40473554	40475289	40474421	ENSG00000279806.1	-	TEC	KNOWN	RP11-58O9.2	1	1	0.780048
chr17	40475828	40501597	40488712	ENSG00000131746.12	-	protein_coding	KNOWN	TNS4	4	13	0.930152
chr17	40517026	40527002	40522014	ENSG00000266088.5	+	lincRNA	KNOWN	RP5-1028K7.2	2	4	1.063977
chr17	40553769	40565472	40559620	ENSG00000126353.3	-	protein_coding	KNOWN	CCR7	3	3	0.685915
chr17	40597113	40598585	40597849	ENSG00000279775.1	-	TEC	KNOWN	RP5-1028K7.1	1	1	0.423613
chr17	40624962	40648508	40636735	ENSG00000073584.18	-	protein_coding	KNOWN	SMARCE1	19	11	0.414871
chr17	40628797	40665141	40646969	ENSG00000264058.1	-	protein_coding	KNOWN	RP5-1028K7.3	1	13	0.284300
chr17	40648300	40649718	40649009	ENSG00000278834.1	+	antisense	KNOWN	RP11-458J1.1	1	1	0.345748
chr17	40654665	40665181	40659923	ENSG00000213424.8	-	protein_coding	KNOWN	KRT222	4	6	0.172610
chr17	40665624	40665723	40665673	ENSG00000271876.1	+	miRNA	NOVEL	AC073508.1	1	1	0.172610
chr17	40687038	40689360	40688199	ENSG00000224244.1	-	unprocessed_pseudogene	KNOWN	AC090283.3	1	5	0.084087
chr17	40697991	40703750	40700870	ENSG00000167916.4	-	protein_coding	KNOWN	KRT24	1	8	0.091992
chr17	40717235	40721932	40719583	ENSG00000229028.2	-	transcribed_unprocessed_pseudogene	KNOWN	KRT223P	2	6	0.254612
chr17	40748021	40755332	40751676	ENSG00000204897.6	-	protein_coding	KNOWN	KRT25	1	8	0.093345
chr17	40766238	40772162	40769200	ENSG00000186393.5	-	protein_coding	KNOWN	KRT26	1	8	0.090374
chr17	40776808	40782534	40779671	ENSG00000171446.6	-	protein_coding	KNOWN	KRT27	2	8	0.168749
chr17	40792203	40799959	40796081	ENSG00000173908.8	-	protein_coding	KNOWN	KRT28	1	8	0.286720
chr17	40803744	40809296	40806520	ENSG00000264488.1	+	lincRNA	KNOWN	RP11-605F20.1	1	3	0.286720
chr17	40818117	40822595	40820356	ENSG00000186395.6	-	protein_coding	KNOWN	KRT10	1	8	0.274052
chr17	40819106	40836274	40827690	ENSG00000167920.8	+	protein_coding	KNOWN	TMEM99	4	3	0.164613
chr17	40850800	40863282	40857041	ENSG00000265359.1	+	antisense	KNOWN	RP5-1110E20.1	1	2	0.238584
chr17	40861303	40867210	40864256	ENSG00000187242.4	-	protein_coding	KNOWN	KRT12	1	8	0.238584
chr17	40875941	40885227	40880584	ENSG00000171431.3	-	protein_coding	KNOWN	KRT20	2	8	0.109914
chr17	40921430	40975926	40948678	ENSG00000234477.1	+	antisense	KNOWN	AC004231.2	1	4	0.419789
chr17	40922696	40937634	40930165	ENSG00000108244.16	-	protein_coding	KNOWN	KRT23	9	9	0.460570
chr17	40958417	40966892	40962654	ENSG00000196859.7	-	protein_coding	KNOWN	KRT39	3	8	0.408600
chr17	40977716	40987135	40982425	ENSG00000204889.10	-	protein_coding	KNOWN	KRT40	3	9	0.559915
chr17	40993430	40994133	40993781	ENSG00000212899.2	-	protein_coding	KNOWN	KRTAP3-3	1	1	0.005483
chr17	40999193	40999894	40999543	ENSG00000212900.2	-	protein_coding	KNOWN	KRTAP3-2	1	1	0.005483
chr17	41004481	41004760	41004620	ENSG00000226776.1	-	unprocessed_pseudogene	KNOWN	KRTAP3-4P	1	1	0.005483
chr17	41008521	41019324	41013922	ENSG00000212901.3	-	protein_coding	KNOWN	KRTAP3-1	2	3	0.344279
chr17	41026026	41027202	41026614	ENSG00000221852.4	-	protein_coding	KNOWN	KRTAP1-5	1	1	0.397978
chr17	41029697	41030104	41029900	ENSG00000204887.4	-	protein_coding	KNOWN	KRTAP1-4	1	1	0.371718
chr17	41033884	41034855	41034369	ENSG00000221880.3	-	protein_coding	KNOWN	KRTAP1-3	1	1	0.296191
chr17	41040559	41041461	41041010	ENSG00000188581.8	-	protein_coding	KNOWN	KRTAP1-1	1	1	0.296191
chr17	41046541	41047316	41046928	ENSG00000212725.3	-	protein_coding	KNOWN	KRTAP2-1	2	2	0.296191
chr17	41054498	41055230	41054864	ENSG00000214518.3	-	protein_coding	KNOWN	KRTAP2-2	2	2	0.400745
chr17	41059240	41060114	41059677	ENSG00000212724.3	-	protein_coding	KNOWN	KRTAP2-3	1	1	0.400745
chr17	41065116	41065879	41065497	ENSG00000213417.3	-	protein_coding	KNOWN	KRTAP2-4	1	1	0.400745
chr17	41071946	41072341	41072143	ENSG00000237230.1	+	unprocessed_pseudogene	KNOWN	KRTAP2-5P	1	1	0.238310
chr17	41084150	41106067	41095108	ENSG00000240871.4	+	protein_coding	KNOWN	KRTAP4-7	3	2	0.205857
chr17	41096981	41098141	41097561	ENSG00000204880.7	-	protein_coding	KNOWN	KRTAP4-8	2	3	0.194043
chr17	41101502	41102209	41101855	ENSG00000241241.1	-	protein_coding	KNOWN	KRTAP4-16P	1	1	0.194043
chr17	41105332	41106488	41105910	ENSG00000212722.7	+	protein_coding	KNOWN	KRTAP4-9	2	3	0.194043
chr17	41117181	41118360	41117770	ENSG00000212721.3	-	protein_coding	KNOWN	KRTAP4-11	1	1	0.335917
chr17	41123091	41124167	41123629	ENSG00000213416.3	-	protein_coding	KNOWN	KRTAP4-12	1	1	0.335917
chr17	41139433	41140487	41139960	ENSG00000198090.3	-	protein_coding	KNOWN	KRTAP4-6	1	1	0.258184
chr17	41148924	41149802	41149363	ENSG00000198271.4	-	protein_coding	KNOWN	KRTAP4-5	1	1	0.258184
chr17	41159651	41160731	41160191	ENSG00000171396.11	-	protein_coding	KNOWN	KRTAP4-4	1	1	0.169994
chr17	41167231	41168194	41167712	ENSG00000196156.4	-	protein_coding	KNOWN	KRTAP4-3	1	1	0.169994
chr17	41177446	41178208	41177827	ENSG00000244537.2	-	protein_coding	KNOWN	KRTAP4-2	1	1	0.202416
chr17	41184102	41185342	41184722	ENSG00000198443.6	-	protein_coding	KNOWN	KRTAP4-1	2	2	0.202416
chr17	41186944	41187136	41187040	ENSG00000251439.1	-	unprocessed_pseudogene	KNOWN	AC006070.12	1	1	0.202416
chr17	41189887	41190639	41190263	ENSG00000240542.4	+	protein_coding	KNOWN	KRTAP9-1	4	3	0.175184
chr17	41212706	41213237	41212971	ENSG00000248807.1	+	unprocessed_pseudogene	KNOWN	KRTAP9-12P	1	1	0.171162
chr17	41226648	41227652	41227150	ENSG00000239886.5	+	protein_coding	KNOWN	KRTAP9-2	1	1	0.171162
chr17	41226653	41256364	41241508	ENSG00000198083.8	+	protein_coding	KNOWN	KRTAP9-9	2	3	0.262009
chr17	41232463	41233454	41232958	ENSG00000204873.4	+	protein_coding	KNOWN	KRTAP9-3	1	1	0.302759
chr17	41232475	41239004	41235739	ENSG00000187272.5	+	protein_coding	KNOWN	KRTAP9-8	2	2	0.302759
chr17	41249687	41250653	41250170	ENSG00000241595.2	+	protein_coding	KNOWN	KRTAP9-4	1	1	0.220815
chr17	41265339	41266641	41265990	ENSG00000212659.1	+	protein_coding	KNOWN	KRTAP9-6	1	1	0.181722
chr17	41271311	41271835	41271573	ENSG00000229351.1	+	unprocessed_pseudogene	KNOWN	KRTAP9-11P	1	1	0.125415
chr17	41275659	41276697	41276178	ENSG00000180386.7	+	protein_coding	KNOWN	KRTAP9-7	1	1	0.125415
chr17	41280604	41280810	41280707	ENSG00000237183.1	+	unprocessed_pseudogene	KNOWN	KRTAP9-10P	1	1	0.125415
chr17	41301826	41302851	41302338	ENSG00000212658.1	-	protein_coding	KNOWN	KRTAP29-1	1	1	0.200141
chr17	41307700	41309253	41308476	ENSG00000212657.1	-	protein_coding	KNOWN	KRTAP16-1	1	1	0.200141
chr17	41314917	41315695	41315306	ENSG00000186860.4	-	protein_coding	KNOWN	KRTAP17-1	1	1	0.545710
chr17	41323427	41329545	41326486	ENSG00000233014.1	+	unprocessed_pseudogene	KNOWN	TBC1D3P7	1	8	0.545710
chr17	41334632	41335733	41335182	ENSG00000108516.5	+	unprocessed_pseudogene	KNOWN	AC003958.6	1	2	0.852416
chr17	41346092	41350812	41348452	ENSG00000006059.3	-	protein_coding	KNOWN	KRT33A	1	7	0.739236
chr17	41363494	41369800	41366647	ENSG00000131738.10	-	protein_coding	KNOWN	KRT33B	1	7	0.195332
chr17	41377650	41382403	41380026	ENSG00000131737.5	-	protein_coding	KNOWN	KRT34	1	7	0.350628
chr17	41393724	41397592	41395658	ENSG00000094796.4	-	protein_coding	KNOWN	KRT31	1	7	0.804552
chr17	41402416	41425049	41413732	ENSG00000234859.5	+	antisense	KNOWN	AC003958.2	2	4	0.840664
chr17	41406512	41411775	41409143	ENSG00000225438.1	-	unprocessed_pseudogene	KNOWN	KRT41P	1	7	0.822878
chr17	41420753	41424523	41422638	ENSG00000108417.3	-	protein_coding	KNOWN	KRT37	1	7	0.858859
chr17	41436446	41440921	41438683	ENSG00000171360.3	-	protein_coding	KNOWN	KRT38	1	7	0.646405
chr17	41448183	41454055	41451119	ENSG00000236473.1	-	unprocessed_pseudogene	KNOWN	KRT43P	1	7	0.771405
chr17	41459811	41467429	41463620	ENSG00000108759.3	-	protein_coding	KNOWN	KRT32	1	7	0.827371
chr17	41467956	41468146	41468051	ENSG00000223125.1	+	snRNA	KNOWN	RNU2-32P	1	1	0.827371
chr17	41476689	41481140	41478914	ENSG00000197079.8	-	protein_coding	KNOWN	KRT35	2	8	0.604512
chr17	41486136	41492546	41489341	ENSG00000126337.13	-	protein_coding	KNOWN	KRT36	2	8	0.628794
chr17	41500981	41505705	41503343	ENSG00000171401.14	-	protein_coding	KNOWN	KRT13	9	8	0.665621
chr17	41500983	41502409	41501696	ENSG00000229732.1	+	antisense	KNOWN	AC019349.5	1	2	0.665621
chr17	41513743	41522529	41518136	ENSG00000171346.13	-	protein_coding	KNOWN	KRT15	9	10	0.679369
chr17	41517164	41517217	41517190	ENSG00000276252.1	-	miRNA	KNOWN	MIR6510	1	1	0.679369
chr17	41523617	41528308	41525962	ENSG00000171345.13	-	protein_coding	KNOWN	KRT19	7	6	0.679369
chr17	41549606	41554495	41552050	ENSG00000226629.1	-	lincRNA	KNOWN	LINC00974	1	3	0.893569
chr17	41565841	41572058	41568949	ENSG00000171403.9	-	protein_coding	KNOWN	KRT9	2	9	0.842826
chr17	41582279	41586921	41584600	ENSG00000186847.5	-	protein_coding	KNOWN	KRT14	3	8	0.758568
chr17	41609778	41615899	41612838	ENSG00000186832.8	-	protein_coding	KNOWN	KRT16	4	8	0.713501
chr17	41619437	41624842	41622139	ENSG00000128422.15	-	protein_coding	KNOWN	KRT17	7	10	0.710718
chr17	41626327	41640199	41633263	ENSG00000214514.7	-	transcribed_unprocessed_pseudogene	KNOWN	KRT42P	6	11	0.780015
chr17	41665566	41668031	41666798	ENSG00000278954.1	+	TEC	KNOWN	RP13-415G19.2	1	1	0.810221
chr17	41688885	41692668	41690776	ENSG00000173812.10	+	protein_coding	KNOWN	EIF1	7	5	0.847990
chr17	41712326	41715969	41714147	ENSG00000184502.3	+	protein_coding	KNOWN	GAST	1	3	0.925531
chr17	41717742	41734644	41726193	ENSG00000173805.15	-	protein_coding	KNOWN	HAP1	7	12	1.000194
chr17	41718154	41718260	41718207	ENSG00000201920.1	+	rRNA	KNOWN	RNA5SP442	1	1	0.925531
chr17	41730127	41730405	41730266	ENSG00000239542.3	-	misc_RNA	KNOWN	RN7SL399P	1	1	1.197211
chr17	41754604	41786931	41770767	ENSG00000173801.16	-	protein_coding	KNOWN	JUP	12	15	1.063709
chr17	41801947	41812604	41807275	ENSG00000141696.12	-	protein_coding	KNOWN	P3H4	8	9	1.306241
chr17	41812680	41823217	41817948	ENSG00000141756.18	+	protein_coding	KNOWN	FKBP10	9	10	1.370968
chr17	41825181	41836263	41830722	ENSG00000141698.16	-	protein_coding	KNOWN	NT5C3B	16	9	1.195578
chr17	41835685	41848384	41842034	ENSG00000161594.6	+	protein_coding	KNOWN	KLHL10	4	5	1.060676
chr17	41848518	41851447	41849982	ENSG00000259623.1	-	sense_overlapping	KNOWN	RP11-156E6.1	1	1	0.869480
chr17	41853545	41865431	41859488	ENSG00000178502.5	-	protein_coding	KNOWN	KLHL11	1	2	0.673927
chr17	41866908	41930542	41898725	ENSG00000131473.16	-	protein_coding	KNOWN	ACLY	10	29	0.960049
chr17	41867581	41867736	41867658	ENSG00000274630.1	+	antisense	KNOWN	RP11-229E13.4	1	1	0.673927
chr17	41930635	41965651	41948143	ENSG00000204815.8	+	protein_coding	KNOWN	TTC25	5	13	0.927100
chr17	41966741	41977731	41972236	ENSG00000173786.16	+	protein_coding	KNOWN	CNP	12	4	1.021741
chr17	41976433	42021376	41998904	ENSG00000168259.14	-	protein_coding	KNOWN	DNAJC7	23	14	0.873649
chr17	42011382	42025644	42018513	ENSG00000168256.17	+	protein_coding	KNOWN	NKIRAS2	14	5	0.848388
chr17	42025576	42065365	42045470	ENSG00000187595.14	-	protein_coding	KNOWN	ZNF385C	5	8	1.108111
chr17	42038232	42038734	42038483	ENSG00000270010.1	-	sense_intronic	KNOWN	CTD-2132N18.4	1	1	1.164892
chr17	42040713	42043117	42041915	ENSG00000267221.1	-	sense_intronic	KNOWN	CTD-2132N18.2	1	2	1.164892
chr17	42101404	42112733	42107068	ENSG00000108771.12	-	protein_coding	KNOWN	DHX58	8	14	1.109714
chr17	42113108	42121358	42117233	ENSG00000108773.10	-	protein_coding	KNOWN	KAT2A	5	18	1.222839
chr17	42119674	42154916	42137295	ENSG00000267261.5	-	protein_coding	KNOWN	CTD-2132N18.3	3	8	1.096671
chr17	42121431	42123352	42122391	ENSG00000260325.1	+	protein_coding	KNOWN	HSPB9	1	1	1.222839
chr17	42124976	42155044	42140010	ENSG00000108774.14	-	protein_coding	KNOWN	RAB5C	9	7	1.073448
chr17	42154600	42155972	42155286	ENSG00000267658.1	+	lincRNA	KNOWN	RP11-358B23.1	1	3	0.867560
chr17	42156891	42181278	42169084	ENSG00000089558.8	-	protein_coding	KNOWN	KCNH4	2	17	0.924069
chr17	42184060	42185452	42184756	ENSG00000161610.1	-	protein_coding	KNOWN	HCRT	1	2	0.989742
chr17	42188799	42194532	42191665	ENSG00000167925.15	-	protein_coding	KNOWN	GHDC	12	10	0.911948
chr17	42199168	42276707	42237937	ENSG00000173757.9	-	protein_coding	KNOWN	STAT5B	7	19	0.721610
chr17	42233832	42235469	42234650	ENSG00000280295.1	+	TEC	KNOWN	RP11-358B23.6	1	1	0.731816
chr17	42268587	42269807	42269197	ENSG00000267758.1	+	antisense	KNOWN	RP11-358B23.5	1	2	0.659467
chr17	42270517	42272683	42271600	ENSG00000236194.3	-	sense_intronic	KNOWN	AC003104.1	1	2	0.605657
chr17	42272069	42275571	42273820	ENSG00000278829.1	-	sense_intronic	KNOWN	RP11-358B23.7	1	2	0.605657
chr17	42287547	42311943	42299745	ENSG00000126561.16	+	protein_coding	KNOWN	STAT5A	12	20	0.905425
chr17	42313324	42388568	42350946	ENSG00000168610.14	-	protein_coding	KNOWN	STAT3	14	24	0.748472
chr17	42399009	42399091	42399050	ENSG00000221020.1	+	miRNA	NOVEL	AC107993.1	1	1	0.758136
chr17	42402452	42423517	42412984	ENSG00000177469.12	-	protein_coding	KNOWN	PTRF	1	2	1.021119
chr17	42440198	42440259	42440228	ENSG00000238704.1	-	snRNA	KNOWN	RNU7-97P	1	1	1.134636
chr17	42458844	42522611	42490727	ENSG00000033627.14	+	protein_coding	KNOWN	ATP6V0A1	25	22	0.774588
chr17	42494773	42494830	42494801	ENSG00000264314.1	+	miRNA	KNOWN	MIR548AT	1	1	0.786056
chr17	42495867	42496550	42496208	ENSG00000267222.1	+	sense_intronic	KNOWN	RP11-194N12.2	1	1	0.786056
chr17	42509784	42511519	42510651	ENSG00000267632.1	+	sense_intronic	KNOWN	RP11-400F19.18	1	1	0.847424
chr17	42514188	42514307	42514247	ENSG00000265611.1	+	miRNA	KNOWN	MIR5010	1	1	0.856104
chr17	42533532	42534009	42533770	ENSG00000267185.1	+	processed_pseudogene	KNOWN	PTP4A2P1	1	1	0.901561
chr17	42536172	42544449	42540310	ENSG00000108784.9	+	protein_coding	KNOWN	NAGLU	5	6	0.901561
chr17	42536510	42562062	42549286	ENSG00000266929.1	+	processed_transcript	KNOWN	RP11-400F19.8	1	5	0.956337
chr17	42546764	42548706	42547735	ENSG00000108785.7	+	unprocessed_pseudogene	KNOWN	HSD17B1P1	1	6	0.901561
chr17	42549214	42555213	42552213	ENSG00000108786.10	+	protein_coding	KNOWN	HSD17B1	5	6	1.002406
chr17	42552436	42554748	42553592	ENSG00000266962.2	-	antisense	KNOWN	RP11-400F19.6	1	1	1.017589
chr17	42561467	42566277	42563872	ENSG00000068120.14	+	protein_coding	KNOWN	COASY	14	11	1.017589
chr17	42567068	42573239	42570153	ENSG00000108788.11	+	protein_coding	KNOWN	MLX	11	8	1.168922
chr17	42572315	42577831	42575073	ENSG00000131470.14	-	protein_coding	KNOWN	PSMC3IP	9	9	1.305822
chr17	42579513	42610623	42595068	ENSG00000141699.10	-	protein_coding	KNOWN	FAM134C	12	9	1.027966
chr17	42598643	42599177	42598910	ENSG00000280183.1	+	TEC	KNOWN	RP11-400F19.12	1	1	0.880016
chr17	42609676	42615234	42612455	ENSG00000131462.7	+	protein_coding	KNOWN	TUBG1	5	11	1.087884
chr17	42647834	42648143	42647988	ENSG00000267189.1	+	processed_pseudogene	KNOWN	ATP5LP7	1	1	1.051350
chr17	42648178	42648738	42648458	ENSG00000267132.1	+	processed_pseudogene	KNOWN	HMGB3P27	1	1	1.051350
chr17	42659305	42667006	42663155	ENSG00000037042.8	+	protein_coding	KNOWN	TUBG2	3	11	1.233348
chr17	42667914	42676994	42672454	ENSG00000068137.14	-	protein_coding	KNOWN	PLEKHH3	9	13	1.300636
chr17	42678889	42683917	42681403	ENSG00000184451.5	-	protein_coding	KNOWN	CCR10	3	2	1.320692
chr17	42679963	42682020	42680991	ENSG00000267042.1	+	antisense	KNOWN	CTD-3193K9.4	1	3	1.320692
chr17	42682613	42699814	42691213	ENSG00000108797.11	+	protein_coding	KNOWN	CNTNAP1	4	24	1.247305
chr17	42683187	42699466	42691326	ENSG00000267765.1	-	antisense	KNOWN	CTD-3193K9.3	1	2	1.245898
chr17	42700275	42745049	42722662	ENSG00000108799.12	-	protein_coding	KNOWN	EZH1	24	21	1.015985
chr17	42708084	42708151	42708117	ENSG00000275273.1	-	miRNA	KNOWN	MIR6780A	1	1	1.192080
chr17	42714299	42714643	42714471	ENSG00000239671.1	+	processed_pseudogene	KNOWN	CTD-3193K9.1	1	1	1.027036
chr17	42751289	42751717	42751503	ENSG00000273650.1	-	lincRNA	KNOWN	CTD-3193K9.11	1	1	0.582437
chr17	42753530	42753799	42753664	ENSG00000214578.5	-	processed_pseudogene	KNOWN	HMGN2P15	1	1	0.582437
chr17	42753914	42761257	42757585	ENSG00000197291.8	-	lincRNA	KNOWN	RAMP2-AS1	5	5	0.582437
chr17	42758447	42763041	42760744	ENSG00000131477.10	+	protein_coding	KNOWN	RAMP2	6	4	0.582437
chr17	42773436	42779599	42776517	ENSG00000131475.6	+	protein_coding	KNOWN	VPS25	6	6	1.315856
chr17	42780678	42796936	42788807	ENSG00000126562.16	+	protein_coding	KNOWN	WNK4	6	19	1.244292
chr17	42795147	42798704	42796925	ENSG00000183978.7	-	protein_coding	KNOWN	COA3	2	3	1.148135
chr17	42798792	42811587	42805189	ENSG00000176563.9	+	protein_coding	KNOWN	CNTD1	7	7	1.100819
chr17	42810134	42833350	42821742	ENSG00000126581.12	-	protein_coding	KNOWN	BECN1	22	12	0.791596
chr17	42823880	42823943	42823911	ENSG00000278447.1	-	miRNA	KNOWN	MIR6781	1	1	0.766896
chr17	42824385	42843758	42834071	ENSG00000131467.10	+	protein_coding	KNOWN	PSME3	17	13	0.888432
chr17	42844600	42850707	42847653	ENSG00000131480.8	+	protein_coding	KNOWN	AOC2	2	4	0.973833
chr17	42851184	42858130	42854657	ENSG00000131471.6	+	protein_coding	KNOWN	AOC3	7	4	1.246928
chr17	42865922	42874369	42870145	ENSG00000260105.6	+	transcribed_unprocessed_pseudogene	KNOWN	AOC4P	6	4	0.932856
chr17	42874670	42898704	42886687	ENSG00000213373.7	-	lincRNA	KNOWN	LINC00671	3	6	0.703774
chr17	42891338	42891435	42891386	ENSG00000252039.1	-	snRNA	KNOWN	RNU6-287P	1	1	0.816357
chr17	42900797	42913369	42907083	ENSG00000131482.9	+	protein_coding	KNOWN	G6PC	4	5	0.868950
chr17	42940575	42940702	42940638	ENSG00000212149.1	-	snoRNA	NOVEL	SNORA40	1	1	0.495889
chr17	42950526	42964498	42957512	ENSG00000266967.6	-	protein_coding	KNOWN	AARSD1	19	12	0.723124
chr17	42950526	42980528	42965527	ENSG00000108825.17	-	protein_coding	KNOWN	PTGES3L-AARSD1	7	18	0.814243
chr17	42968088	42980433	42974260	ENSG00000267060.5	-	protein_coding	KNOWN	PTGES3L	6	7	0.942571
chr17	42980565	42993690	42987127	ENSG00000198863.7	+	protein_coding	KNOWN	RUNDC1	3	5	0.909271
chr17	42993098	42993781	42993439	ENSG00000281079.1	-	protein_coding	KNOWN	AC055866.1	1	2	0.721429
chr17	42998273	43002959	43000616	ENSG00000131469.12	+	protein_coding	KNOWN	RPL27	8	5	0.721429
chr17	43006725	43014456	43010590	ENSG00000068079.7	+	protein_coding	KNOWN	IFI35	8	7	0.776035
chr17	43014605	43025123	43019864	ENSG00000108828.15	-	protein_coding	KNOWN	VAT1	9	6	0.816148
chr17	43025241	43032036	43028638	ENSG00000108830.9	+	protein_coding	KNOWN	RND2	2	5	0.868429
chr17	43044295	43170245	43107270	ENSG00000012048.20	-	protein_coding	KNOWN	BRCA1	30	24	0.700512
chr17	43079302	43079780	43079541	ENSG00000240828.1	+	processed_pseudogene	KNOWN	RPL21P4	1	1	0.654783
chr17	43125610	43153671	43139640	ENSG00000198496.10	+	transcribed_unprocessed_pseudogene	KNOWN	NBR2	4	8	0.766018
chr17	43144956	43145255	43145105	ENSG00000267681.1	+	transcribed_processed_pseudogene	KNOWN	CTD-3199J23.6	1	1	0.827164
chr17	43148368	43171037	43159702	ENSG00000267002.2	-	lincRNA	KNOWN	RP11-242D8.1	4	4	0.711294
chr17	43168170	43168249	43168209	ENSG00000267595.1	-	unprocessed_pseudogene	KNOWN	RP11-242D8.2	1	1	0.702340
chr17	43169880	43170077	43169978	ENSG00000267340.1	-	processed_pseudogene	KNOWN	RP11-242D8.3	1	1	0.702110
chr17	43170481	43211689	43191085	ENSG00000188554.13	+	protein_coding	KNOWN	NBR1	8	21	0.695856
chr17	43211835	43220041	43215938	ENSG00000184988.8	+	protein_coding	KNOWN	TMEM106A	8	10	0.668780
chr17	43216941	43305976	43261458	ENSG00000236383.7	-	processed_transcript	KNOWN	LINC00854	15	6	0.919654
chr17	43233787	43233977	43233882	ENSG00000274585.1	-	snRNA	KNOWN	RNU2-1	1	1	0.820079
chr17	43239921	43240111	43240016	ENSG00000275616.1	-	snRNA	NOVEL	U2	1	1	0.820079
chr17	43241180	43241370	43241275	ENSG00000273709.1	-	snRNA	NOVEL	U2	1	1	0.820079
chr17	43245674	43245864	43245769	ENSG00000274432.1	-	snRNA	NOVEL	U2	1	1	0.820079
chr17	43251829	43252019	43251924	ENSG00000278048.1	-	snRNA	NOVEL	U2	1	1	1.035676
chr17	43266633	43266823	43266728	ENSG00000276596.1	-	snRNA	NOVEL	U2	1	1	1.035676
chr17	43271369	43271559	43271464	ENSG00000277903.1	-	snRNA	NOVEL	U2	1	1	1.078427
chr17	43273101	43273292	43273196	ENSG00000278774.1	-	snRNA	NOVEL	U2	1	1	1.078427
chr17	43277978	43278168	43278073	ENSG00000274862.1	-	snRNA	NOVEL	U2	1	1	1.078427
chr17	43284139	43284329	43284234	ENSG00000274062.1	-	snRNA	NOVEL	U2	1	1	1.078427
chr17	43290291	43290481	43290386	ENSG00000274452.1	-	snRNA	NOVEL	U2	1	1	0.905352
chr17	43296425	43296615	43296520	ENSG00000275219.1	-	snRNA	NOVEL	U2	1	1	0.905352
chr17	43300041	43300231	43300136	ENSG00000278591.1	-	snRNA	NOVEL	U2	1	1	0.905352
chr17	43360041	43361361	43360701	ENSG00000279602.1	-	TEC	KNOWN	CTD-3014M21.1	1	1	0.739513
chr17	43369845	43389199	43379522	ENSG00000188825.13	-	lincRNA	KNOWN	LINC00910	6	6	0.700475
chr17	43387226	43387417	43387321	ENSG00000277084.1	-	snRNA	KNOWN	RNU2-4P	1	1	0.700162
chr17	43395993	43396091	43396042	ENSG00000252882.1	-	snRNA	KNOWN	RNU6-1137P	1	1	0.929197
chr17	43398959	43401137	43400048	ENSG00000175906.4	+	protein_coding	KNOWN	ARL4D	1	2	0.929197
chr17	43412427	43412530	43412478	ENSG00000251763.1	+	snRNA	KNOWN	RNU6-470P	1	1	0.883955
chr17	43444707	43451200	43447953	ENSG00000267151.3	+	lincRNA	KNOWN	MIR2117HG	1	2	0.591111
chr17	43444806	43444885	43444845	ENSG00000278547.1	+	miRNA	KNOWN	MIR2117	1	1	0.611560
chr17	43445507	43445613	43445560	ENSG00000252279.1	+	snRNA	KNOWN	RNU6-406P	1	1	0.611560
chr17	43473585	43473690	43473637	ENSG00000252729.1	+	snRNA	KNOWN	RNU6-971P	1	1	0.896668
chr17	43476198	43476665	43476431	ENSG00000237888.1	+	processed_pseudogene	KNOWN	AC087650.1	1	1	0.896668
chr17	43483865	43544463	43514164	ENSG00000067596.10	+	protein_coding	KNOWN	DHX8	7	23	0.799980
chr17	43527844	43579620	43553732	ENSG00000175832.12	-	protein_coding	KNOWN	ETV4	11	13	0.829857
chr17	43544785	43610338	43577561	ENSG00000267747.1	+	antisense	KNOWN	RP11-392O1.4	1	3	0.689106
chr17	43607436	43607723	43607579	ENSG00000278109.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.469359
chr17	43640388	43661954	43651171	ENSG00000005102.12	-	protein_coding	KNOWN	MEOX1	4	4	0.632251
chr17	43680273	43705884	43693078	ENSG00000267440.1	+	lincRNA	KNOWN	CTC-501O10.1	1	2	0.863802
chr17	43718314	43720436	43719375	ENSG00000267253.1	-	processed_pseudogene	KNOWN	RP11-209M4.1	1	1	0.460276
chr17	43753731	43758788	43756259	ENSG00000167941.2	-	protein_coding	KNOWN	SOST	1	2	0.679418
chr17	43766121	43778988	43772554	ENSG00000108861.8	-	protein_coding	KNOWN	DUSP3	5	4	0.769140
chr17	43780435	43787612	43784023	ENSG00000231256.7	+	protein_coding	KNOWN	C17orf105	2	6	0.807848
chr17	43782804	43784682	43783743	ENSG00000267604.1	-	antisense	KNOWN	RP5-905N1.2	1	3	0.807848
chr17	43800799	43833170	43816984	ENSG00000161647.18	-	protein_coding	KNOWN	MPP3	9	20	0.707424
chr17	43847148	43863629	43855388	ENSG00000161649.12	+	protein_coding	KNOWN	CD300LG	7	7	0.727780
chr17	43875357	43909711	43892534	ENSG00000108852.14	-	protein_coding	KNOWN	MPP2	21	14	0.940767
chr17	43914433	43923001	43918717	ENSG00000282199.1	-	processed_transcript	KNOWN	RP11-527L4.5	2	4	0.891354
chr17	43917194	43917985	43917589	ENSG00000267496.4	+	lincRNA	KNOWN	FAM215A	2	1	0.891354
chr17	43922775	43927388	43925081	ENSG00000267166.5	-	unprocessed_pseudogene	KNOWN	RP11-527L4.9	1	5	0.891354
chr17	43927563	43932622	43930092	ENSG00000267420.1	+	lincRNA	KNOWN	RP11-527L4.6	1	3	0.876399
chr17	43938363	43938959	43938661	ENSG00000261514.1	+	lincRNA	KNOWN	RP11-527L4.2	1	2	0.862510
chr17	43940804	43942468	43941636	ENSG00000108849.7	-	protein_coding	KNOWN	PPY	6	4	0.862510
chr17	43952738	44004469	43978603	ENSG00000131096.10	-	protein_coding	KNOWN	PYY	2	7	0.702624
chr17	44004546	44009063	44006804	ENSG00000161653.10	+	protein_coding	KNOWN	NAGS	3	7	0.822385
chr17	44011188	44023946	44017567	ENSG00000091947.9	-	protein_coding	KNOWN	TMEM101	8	5	0.882273
chr17	44025020	44025223	44025121	ENSG00000221044.2	-	snoRNA	NOVEL	U3	1	1	0.882273
chr17	44034635	44067619	44051127	ENSG00000161654.9	-	protein_coding	KNOWN	LSM12	4	6	0.931560
chr17	44070735	44076344	44073539	ENSG00000141349.8	+	protein_coding	KNOWN	G6PC3	8	7	1.380561
chr17	44076746	44123702	44100224	ENSG00000108840.15	-	protein_coding	KNOWN	HDAC5	12	27	1.281359
chr17	44115912	44120595	44118253	ENSG00000267638.1	+	antisense	KNOWN	RP11-546M21.6	1	3	1.300494
chr17	44123539	44123649	44123594	ENSG00000274433.1	-	miRNA	NOVEL	AC023855.1	1	1	1.300494
chr17	44135883	44135989	44135936	ENSG00000212446.1	-	snRNA	KNOWN	RNU6-131P	1	1	1.036978
chr17	44141906	44162476	44152191	ENSG00000125319.14	+	protein_coding	KNOWN	C17orf53	5	10	1.078267
chr17	44170447	44179083	44174765	ENSG00000161664.6	+	protein_coding	KNOWN	ASB16	3	5	0.963984
chr17	44175973	44186717	44181345	ENSG00000267080.5	-	antisense	KNOWN	ASB16-AS1	5	4	0.963984
chr17	44186970	44191731	44189350	ENSG00000168591.15	+	protein_coding	KNOWN	TMUB2	15	6	0.955255
chr17	44191805	44200113	44195959	ENSG00000087152.15	-	protein_coding	KNOWN	ATXN7L3	12	13	0.939989
chr17	44198882	44216565	44207723	ENSG00000267394.1	+	antisense	KNOWN	CTB-175E5.7	1	2	1.151878
chr17	44205033	44221626	44213329	ENSG00000108312.14	-	protein_coding	KNOWN	UBTF	14	21	1.339848
chr17	44207771	44207839	44207805	ENSG00000275107.1	-	miRNA	KNOWN	MIR6782	1	1	0.939989
chr17	44221401	44223710	44222555	ENSG00000260793.2	+	antisense	KNOWN	RP5-882C2.2	2	2	1.510632
chr17	44228760	44230228	44229494	ENSG00000267691.1	-	processed_pseudogene	KNOWN	SHC1P2	1	1	1.444565
chr17	44248385	44268141	44258263	ENSG00000004939.13	-	protein_coding	KNOWN	SLC4A1	6	20	1.083684
chr17	44290856	44291151	44291003	ENSG00000239702.3	-	misc_RNA	KNOWN	RN7SL507P	1	1	0.655421
chr17	44299574	44315315	44307444	ENSG00000267750.5	-	antisense	KNOWN	RUNDC3A-AS1	2	5	0.804458
chr17	44303965	44304203	44304084	ENSG00000221496.2	+	snoRNA	NOVEL	U3	1	1	0.655421
chr17	44307088	44307172	44307130	ENSG00000252628.2	+	snRNA	KNOWN	RNU6-453P	1	1	0.655421
chr17	44308413	44318671	44313542	ENSG00000108309.12	+	protein_coding	KNOWN	RUNDC3A	8	11	1.028499
chr17	44319625	44324870	44322247	ENSG00000013306.15	-	protein_coding	KNOWN	SLC25A39	17	12	1.096730
chr17	44328613	44331462	44330037	ENSG00000267211.1	+	lincRNA	KNOWN	RP5-1067M6.3	1	2	1.267996
chr17	44345086	44353102	44349094	ENSG00000030582.16	+	protein_coding	KNOWN	GRN	21	13	1.282537
chr17	44353215	44363875	44358545	ENSG00000161682.14	-	protein_coding	KNOWN	FAM171A2	4	8	1.048664
chr17	44365014	44365751	44365382	ENSG00000267634.1	-	processed_pseudogene	KNOWN	RPL7L1P5	1	1	1.048664
chr17	44372180	44389505	44380842	ENSG00000005961.17	-	protein_coding	KNOWN	ITGA2B	10	30	0.949973
chr17	44395284	44503430	44449357	ENSG00000186566.12	-	protein_coding	KNOWN	GPATCH8	11	10	0.511114
chr17	44409059	44409358	44409208	ENSG00000240589.3	-	misc_RNA	KNOWN	RN7SL258P	1	1	0.600139
chr17	44486153	44486815	44486484	ENSG00000283045.1	-	sense_intronic	KNOWN	RP11-764D10.2	1	1	0.526793
chr17	44557459	44559570	44558514	ENSG00000180340.6	+	protein_coding	KNOWN	FZD2	1	1	0.794896
chr17	44596346	44597344	44596845	ENSG00000271222.1	+	processed_pseudogene	KNOWN	RP11-1072C15.7	1	2	0.793080
chr17	44645411	44645587	44645499	ENSG00000267384.3	+	processed_pseudogene	KNOWN	SMCO4P1	1	1	0.631065
chr17	44646364	44650349	44648356	ENSG00000266979.1	-	lincRNA	KNOWN	LINC01180	1	3	0.635399
chr17	44656404	44690308	44673356	ENSG00000180336.17	+	protein_coding	KNOWN	C17orf104	7	11	0.456698
chr17	44673069	44689779	44681424	ENSG00000180329.13	-	protein_coding	KNOWN	CCDC43	5	5	0.305166
chr17	44673689	44676257	44674973	ENSG00000267160.1	-	antisense	KNOWN	RP11-1072C15.4	1	1	0.305166
chr17	44689858	44693340	44691599	ENSG00000279879.1	+	TEC	KNOWN	RP11-1072C15.6	1	1	0.417228
chr17	44708608	44752264	44730436	ENSG00000161692.17	+	protein_coding	KNOWN	DBF4B	10	15	0.628453
chr17	44718861	44719130	44718995	ENSG00000264251.2	-	misc_RNA	KNOWN	RN7SL819P	1	1	0.667852
chr17	44719760	44720597	44720178	ENSG00000240305.1	-	processed_pseudogene	KNOWN	RP11-1072C15.1	1	1	0.667852
chr17	44759031	44781846	44770438	ENSG00000073670.13	+	protein_coding	KNOWN	ADAM11	5	27	0.977553
chr17	44793199	44794474	44793836	ENSG00000267505.1	+	lincRNA	KNOWN	CTC-296K1.3	1	2	0.892054
chr17	44794747	44797783	44796265	ENSG00000267405.1	-	lincRNA	KNOWN	CTC-296K1.4	1	2	0.892054
chr17	44798448	44830816	44814632	ENSG00000182963.9	-	protein_coding	KNOWN	GJC1	9	3	0.751770
chr17	44846353	44850480	44848416	ENSG00000131097.6	+	protein_coding	KNOWN	HIGD1B	5	4	0.823813
chr17	44849943	44899662	44874802	ENSG00000108883.12	-	protein_coding	KNOWN	EFTUD2	26	28	0.746589
chr17	44883986	44884274	44884130	ENSG00000264540.2	+	misc_RNA	KNOWN	RN7SL405P	1	1	0.842239
chr17	44899142	44905390	44902266	ENSG00000167131.16	+	protein_coding	KNOWN	CCDC103	5	4	0.370418
chr17	44899712	44905390	44902551	ENSG00000214447.4	+	protein_coding	KNOWN	FAM187A	2	4	0.370418
chr17	44903161	44904546	44903853	ENSG00000224911.1	-	antisense	KNOWN	AC015936.3	1	2	0.370418
chr17	44905008	44916937	44910972	ENSG00000131095.11	-	protein_coding	KNOWN	GFAP	23	9	0.737482
chr17	44924709	44947711	44936210	ENSG00000186185.13	-	protein_coding	KNOWN	KIF18B	4	16	1.205556
chr17	44934618	44934681	44934649	ENSG00000278223.1	-	miRNA	KNOWN	MIR6783	1	1	1.266490
chr17	44947912	44948939	44948425	ENSG00000267334.1	+	lincRNA	KNOWN	CTD-2534I21.8	1	1	1.266490
chr17	44959693	44968071	44963882	ENSG00000131094.3	-	protein_coding	KNOWN	C1QL1	1	2	0.714709
chr17	44982514	44982772	44982643	ENSG00000267788.1	+	lincRNA	KNOWN	CTD-2534I21.9	1	1	1.139298
chr17	45023340	45061109	45042224	ENSG00000172992.11	-	protein_coding	KNOWN	DCAKD	8	5	0.908271
chr17	45051610	45109016	45080313	ENSG00000136448.11	+	protein_coding	KNOWN	NMT1	13	13	0.746961
chr17	45071442	45071543	45071492	ENSG00000200888.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.586998
chr17	45108967	45133354	45121160	ENSG00000161714.11	-	protein_coding	KNOWN	PLCD3	12	15	1.148019
chr17	45114367	45114433	45114400	ENSG00000277249.1	-	miRNA	KNOWN	MIR6784	1	1	1.207469
chr17	45132600	45144181	45138390	ENSG00000181513.14	+	protein_coding	KNOWN	ACBD4	16	12	0.890158
chr17	45146730	45148470	45147600	ENSG00000276728.1	-	lincRNA	KNOWN	AC142472.6	1	1	0.890158
chr17	45148502	45152101	45150301	ENSG00000186834.3	+	protein_coding	KNOWN	HEXIM1	1	1	0.993282
chr17	45150400	45161510	45155955	ENSG00000224505.2	-	antisense	KNOWN	AC002117.1	2	2	1.066725
chr17	45160700	45170040	45165370	ENSG00000168517.10	+	protein_coding	KNOWN	HEXIM2	8	4	1.065761
chr17	45168800	45171584	45170192	ENSG00000267288.2	-	antisense	KNOWN	RP13-890H12.2	2	2	0.941737
chr17	45190931	45222222	45206576	ENSG00000267121.5	-	antisense	KNOWN	CTD-2020K17.1	5	3	0.765120
chr17	45221444	45247320	45234382	ENSG00000184922.13	+	protein_coding	KNOWN	FMNL1	12	27	0.823339
chr17	45238028	45241734	45239881	ENSG00000233175.2	-	antisense	KNOWN	CTD-2020K17.3	2	2	0.907041
chr17	45245186	45248836	45247011	ENSG00000233483.2	-	antisense	KNOWN	CTD-2020K17.4	3	4	0.907041
chr17	45247925	45268630	45258277	ENSG00000267278.5	+	antisense	KNOWN	MAP3K14-AS1	10	5	0.872765
chr17	45254393	45262112	45258252	ENSG00000184361.12	-	protein_coding	KNOWN	SPATA32	3	7	0.868949
chr17	45263121	45317040	45290080	ENSG00000006062.13	-	protein_coding	KNOWN	MAP3K14	5	16	0.901613
chr17	45327366	45327497	45327431	ENSG00000199953.1	-	rRNA	KNOWN	RNA5SP443	1	1	0.663149
chr17	45371402	45372057	45371729	ENSG00000267446.1	-	lincRNA	KNOWN	CTB-39G8.2	1	2	0.797048
chr17	45393902	45434421	45414161	ENSG00000159314.11	-	protein_coding	KNOWN	ARHGAP27	19	17	1.022983
chr17	45396932	45397477	45397204	ENSG00000267344.1	+	antisense	KNOWN	CTB-39G8.3	1	2	0.929439
chr17	45416813	45416906	45416859	ENSG00000264038.1	-	miRNA	NOVEL	AC091132.2	1	1	1.134741
chr17	45435900	45490749	45463324	ENSG00000225190.8	-	protein_coding	KNOWN	PLEKHM1	18	12	0.656642
chr17	45452844	45464065	45458454	ENSG00000236234.1	+	antisense	KNOWN	AC091132.1	1	4	0.611663
chr17	45506741	45550335	45528538	ENSG00000214425.6	-	transcribed_unprocessed_pseudogene	KNOWN	LRRC37A4P	2	12	0.409055
chr17	45526466	45526746	45526606	ENSG00000278770.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.527059
chr17	45531577	45533838	45532707	ENSG00000266918.1	+	lincRNA	KNOWN	RP11-798G7.8	1	1	0.239745
chr17	45533963	45534710	45534336	ENSG00000131484.4	+	antisense	KNOWN	RP11-798G7.5	1	2	0.239745
chr17	45545804	45563230	45554517	ENSG00000267198.1	+	lincRNA	KNOWN	RP11-798G7.6	5	2	0.320230
chr17	45549781	45558738	45554259	ENSG00000267246.1	-	processed_transcript	KNOWN	RP11-798G7.7	1	4	0.343168
chr17	45553710	45559070	45556390	ENSG00000266504.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-798G7.4	1	4	0.345748
chr17	45585871	45586929	45586400	ENSG00000264070.1	+	processed_pseudogene	KNOWN	DND1P1	1	1	0.277547
chr17	45592621	45593369	45592995	ENSG00000280022.1	+	TEC	KNOWN	RP11-707O23.1	1	1	0.425893
chr17	45600869	45602340	45601604	ENSG00000263503.1	-	processed_pseudogene	KNOWN	RP11-707O23.5	1	1	0.425893
chr17	45608571	45608918	45608744	ENSG00000204652.6	+	processed_pseudogene	KNOWN	RPS26P8	1	1	0.425893
chr17	45620328	45655156	45637742	ENSG00000204650.13	+	processed_transcript	KNOWN	CRHR1-IT1	13	5	0.481209
chr17	45620344	45835826	45728085	ENSG00000263715.7	+	protein_coding	KNOWN	CRHR1	2	15	0.511839
chr17	45633049	45636444	45634746	ENSG00000282774.1	+	transcribed_unitary_pseudogene	KNOWN	AC126544.4	1	2	0.343531
chr17	45637110	45637206	45637158	ENSG00000273917.1	+	miRNA	NOVEL	AC126544.1	1	1	0.343531
chr17	45731703	45732977	45732340	ENSG00000265547.1	-	lincRNA	KNOWN	RP11-293E1.2	1	2	0.215727
chr17	45733353	45734669	45734011	ENSG00000265964.1	-	lincRNA	KNOWN	RP11-293E1.1	1	2	0.215727
chr17	45784280	45835828	45810054	ENSG00000120088.14	+	protein_coding	KNOWN	CRHR1	14	14	0.676547
chr17	45799390	45895630	45847510	ENSG00000264589.2	-	antisense	KNOWN	MAPT-AS1	4	7	0.547123
chr17	45844835	45847072	45845953	ENSG00000185294.6	+	protein_coding	KNOWN	SPPL2C	1	1	0.727228
chr17	45894382	46028334	45961358	ENSG00000186868.15	+	protein_coding	KNOWN	MAPT	18	15	0.506226
chr17	45895783	45898798	45897290	ENSG00000279685.2	+	sense_intronic	KNOWN	MAPT-IT1	1	1	0.494538
chr17	45907670	45910779	45909224	ENSG00000262881.1	-	antisense	KNOWN	RP11-669E14.4	1	2	0.455040
chr17	45931806	45932083	45931944	ENSG00000274883.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.379274
chr17	45999250	45999694	45999472	ENSG00000256762.1	+	protein_coding	KNOWN	STH	1	1	0.786647
chr17	46029916	46225374	46127645	ENSG00000120071.12	-	protein_coding	KNOWN	KANSL1	17	16	0.323493
chr17	46035313	46035770	46035541	ENSG00000262372.1	+	antisense	KNOWN	RP11-669E14.6	1	2	0.466840
chr17	46172089	46172239	46172164	ENSG00000280985.1	-	miRNA	NOVEL	AC217773.1	1	1	0.254097
chr17	46193576	46196723	46195149	ENSG00000214401.4	+	antisense	KNOWN	KANSL1-AS1	3	2	0.356448
chr17	46215070	46215171	46215120	ENSG00000238723.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.445629
chr17	46243606	46245044	46244325	ENSG00000262500.1	+	processed_pseudogene	KNOWN	RP11-259G18.2	1	1	0.289931
chr17	46259551	46260606	46260078	ENSG00000262539.1	-	processed_pseudogene	KNOWN	RP11-259G18.3	1	1	0.444873
chr17	46267037	46268694	46267865	ENSG00000261575.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-259G18.1	2	2	0.444873
chr17	46274784	46361797	46318290	ENSG00000228696.8	-	protein_coding	KNOWN	ARL17B	8	5	0.387787
chr17	46292733	46337794	46315263	ENSG00000176681.14	+	protein_coding	KNOWN	LRRC37A	3	14	0.406334
chr17	46319679	46319959	46319819	ENSG00000265411.1	+	misc_RNA	KNOWN	RN7SL656P	1	1	0.288215
chr17	46372855	46487141	46429998	ENSG00000260075.1	+	unprocessed_pseudogene	KNOWN	NSFP1	1	13	0.190555
chr17	46503946	46509339	46506642	ENSG00000266497.1	+	unprocessed_pseudogene	KNOWN	RP11-995C19.2	1	4	0.534302
chr17	46511511	46555650	46533580	ENSG00000238083.7	+	protein_coding	KNOWN	LRRC37A2	3	15	0.355070
chr17	46516702	46579722	46548212	ENSG00000185829.15	-	protein_coding	KNOWN	ARL17A	7	5	0.343372
chr17	46537534	46537814	46537674	ENSG00000265315.1	+	misc_RNA	KNOWN	RN7SL199P	1	1	0.205948
chr17	46537734	46537813	46537773	ENSG00000280583.1	+	miRNA	NOVEL	AC138645.1	1	1	0.205948
chr17	46558830	46562795	46560812	ENSG00000232300.1	-	lincRNA	KNOWN	FAM215B	1	2	0.491163
chr17	46590669	46757464	46674066	ENSG00000073969.18	+	protein_coding	KNOWN	NSF	8	21	0.229070
chr17	46721582	46722167	46721874	ENSG00000213326.4	-	processed_pseudogene	KNOWN	RPS7P11	1	1	0.467283
chr17	46762506	46833154	46797830	ENSG00000108379.9	-	protein_coding	KNOWN	WNT3	4	5	0.676506
chr17	46833201	46886730	46859965	ENSG00000158955.10	+	protein_coding	KNOWN	WNT9B	3	5	0.698351
chr17	46909742	46911512	46910627	ENSG00000262031.1	-	lincRNA	KNOWN	RP11-63A1.2	1	2	0.429347
chr17	46916770	46923034	46919902	ENSG00000261886.1	-	lincRNA	KNOWN	RP11-63A1.1	1	3	0.396846
chr17	46921124	46921249	46921186	ENSG00000210709.1	+	snRNA	KNOWN	RNU6ATAC3P	1	1	0.396846
chr17	46923117	46967019	46945068	ENSG00000108433.15	+	protein_coding	KNOWN	GOSR2	10	7	0.527570
chr17	46923133	47047154	46985143	ENSG00000262633.1	+	protein_coding	KNOWN	RP11-156P1.2	1	10	0.448081
chr17	46939155	46939860	46939507	ENSG00000280158.1	-	TEC	KNOWN	RP11-63A1.4	1	1	0.377987
chr17	46973017	46973100	46973058	ENSG00000264999.1	+	miRNA	KNOWN	MIR5089	1	1	0.599878
chr17	46978156	46979248	46978702	ENSG00000179673.4	-	protein_coding	KNOWN	RPRML	1	1	0.599878
chr17	46978481	47054569	47016525	ENSG00000263142.5	+	transcribed_unprocessed_pseudogene	KNOWN	LRRC37A17P	2	9	0.371502
chr17	46984045	47100323	47042184	ENSG00000262879.5	-	processed_transcript	KNOWN	RP11-156P1.3	11	6	0.374797
chr17	47041825	47042105	47041965	ENSG00000277198.1	+	misc_RNA	KNOWN	RN7SL270P	1	1	0.265323
chr17	47042025	47042104	47042064	ENSG00000281864.1	+	miRNA	NOVEL	AC068152.1	1	1	0.265323
chr17	47117703	47189422	47153562	ENSG00000004897.11	-	protein_coding	KNOWN	CDC27	19	19	0.313452
chr17	47118502	47118591	47118546	ENSG00000221016.1	+	miRNA	NOVEL	AC002558.1	1	1	0.680796
chr17	47159191	47159993	47159592	ENSG00000239291.1	-	processed_pseudogene	KNOWN	RP5-867C24.1	1	1	0.058439
chr17	47161075	47162064	47161569	ENSG00000262265.1	-	sense_intronic	KNOWN	RP5-867C24.4	1	2	0.058439
chr17	47169826	47171049	47170437	ENSG00000261872.1	+	antisense	KNOWN	RP5-867C24.5	1	2	0.272870
chr17	47200446	47223679	47212062	ENSG00000198336.9	+	protein_coding	KNOWN	MYL4	10	8	0.407523
chr17	47253846	47311816	47282831	ENSG00000259207.7	+	protein_coding	KNOWN	ITGB3	3	15	0.592727
chr17	47253897	47344292	47299094	ENSG00000259753.1	+	protein_coding	KNOWN	RP11-290H9.2	1	18	0.526915
chr17	47259358	47259420	47259389	ENSG00000238419.1	-	snRNA	KNOWN	RNU7-186P	1	1	0.615554
chr17	47279526	47280047	47279786	ENSG00000276790.1	-	antisense	KNOWN	RP11-290H9.5	1	1	0.560667
chr17	47303460	47323613	47313536	ENSG00000263293.2	-	antisense	KNOWN	THCAT158	2	3	0.619234
chr17	47323290	47441312	47382301	ENSG00000178852.15	+	protein_coding	KNOWN	EFCAB13	13	25	0.155549
chr17	47409322	47423526	47416424	ENSG00000253347.1	-	antisense	KNOWN	CTD-2026D20.2	1	2	-0.060160
chr17	47450568	47492492	47471530	ENSG00000228782.7	-	transcribed_unprocessed_pseudogene	KNOWN	CTD-2026D20.3	4	7	0.380999
chr17	47522942	47623276	47573109	ENSG00000141279.15	+	protein_coding	KNOWN	NPEPPS	25	24	0.385407
chr17	47557413	47557514	47557463	ENSG00000206734.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.488651
chr17	47603860	47649420	47626640	ENSG00000263766.5	-	antisense	KNOWN	RP11-580I16.2	4	4	0.533725
chr17	47649476	47685505	47667490	ENSG00000108424.9	+	protein_coding	KNOWN	KPNB1	14	22	0.581137
chr17	47682417	47682683	47682550	ENSG00000264558.1	-	antisense	KNOWN	RP11-138C9.1	1	1	0.558458
chr17	47694081	47712050	47703065	ENSG00000198933.9	+	protein_coding	KNOWN	TBKBP1	4	9	0.938371
chr17	47733244	47746119	47739681	ENSG00000073861.2	+	protein_coding	KNOWN	TBX21	2	6	0.979292
chr17	47807372	47821834	47814603	ENSG00000006025.11	-	protein_coding	KNOWN	OSBPL7	11	24	0.916102
chr17	47823272	47831534	47827403	ENSG00000159111.12	-	protein_coding	KNOWN	MRPL10	7	6	1.028136
chr17	47831627	47837713	47834670	ENSG00000141294.9	+	protein_coding	KNOWN	LRRC46	5	8	1.091992
chr17	47837692	47841333	47839512	ENSG00000141295.13	-	protein_coding	KNOWN	SCRN2	13	8	1.091992
chr17	47844908	47855874	47850391	ENSG00000189120.4	-	protein_coding	KNOWN	SP6	2	2	1.069844
chr17	47863342	47865190	47864266	ENSG00000264243.1	+	lincRNA	KNOWN	RP11-6N17.1	1	2	1.050651
chr17	47879472	47882398	47880935	ENSG00000266821.1	-	lincRNA	KNOWN	RP11-6N17.2	1	1	0.766005
chr17	47891255	47895812	47893533	ENSG00000264920.1	-	processed_transcript	KNOWN	RP11-6N17.4	3	3	0.866311
chr17	47896150	47928957	47912553	ENSG00000167182.12	+	protein_coding	KNOWN	SP2	2	7	0.858683
chr17	47897330	47941410	47919370	ENSG00000234494.7	-	antisense	KNOWN	SP2-AS1	4	4	0.773819
chr17	47929682	47933106	47931394	ENSG00000266601.1	-	antisense	KNOWN	RP11-6N17.3	1	3	0.561869
chr17	47941506	47948288	47944897	ENSG00000108439.9	+	protein_coding	KNOWN	PNPO	8	7	0.532154
chr17	47945424	47974438	47959931	ENSG00000263798.1	+	processed_transcript	KNOWN	RP11-6N17.9	1	8	0.721210
chr17	47946802	47948275	47947538	ENSG00000264019.1	-	antisense	KNOWN	RP11-6N17.6	2	2	0.532154
chr17	47951967	47957878	47954922	ENSG00000167183.2	-	protein_coding	KNOWN	PRR15L	1	2	0.785745
chr17	47967810	47981774	47974792	ENSG00000108465.14	+	protein_coding	KNOWN	CDK5RAP3	37	14	0.650445
chr17	47980398	47996196	47988297	ENSG00000264701.1	-	antisense	KNOWN	RP11-6N17.10	1	2	0.794473
chr17	48026167	48038030	48032098	ENSG00000005243.9	-	protein_coding	KNOWN	COPZ2	10	9	0.898909
chr17	48037154	48037262	48037208	ENSG00000207947.2	-	miRNA	KNOWN	MIR152	1	1	1.029061
chr17	48045141	48048073	48046607	ENSG00000263412.1	-	processed_transcript	KNOWN	RP5-890E16.2	2	2	1.029061
chr17	48048329	48061487	48054908	ENSG00000082641.15	+	protein_coding	KNOWN	NFE2L1	23	6	0.847601
chr17	48048365	48048430	48048397	ENSG00000273862.1	+	miRNA	NOVEL	AC004477.1	1	1	1.029061
chr17	48060383	48060669	48060526	ENSG00000266341.1	-	antisense	KNOWN	RP5-890E16.4	1	2	0.821222
chr17	48066704	48067293	48066998	ENSG00000278765.1	-	lincRNA	KNOWN	RP5-890E16.5	1	1	0.821222
chr17	48070052	48101521	48085786	ENSG00000108468.14	-	protein_coding	KNOWN	CBX1	6	6	0.751873
chr17	48088678	48088784	48088731	ENSG00000206954.1	-	snRNA	KNOWN	RNU6-1201P	1	1	0.718533
chr17	48103357	48123074	48113215	ENSG00000002919.14	+	protein_coding	KNOWN	SNX11	13	8	0.731368
chr17	48133440	48430275	48281857	ENSG00000141293.15	-	protein_coding	KNOWN	SKAP1	8	14	0.060047
chr17	48156427	48156511	48156469	ENSG00000221739.1	-	miRNA	KNOWN	MIR1203	1	1	0.623843
chr17	48185938	48204529	48195233	ENSG00000263787.1	+	antisense	KNOWN	RP11-456D7.1	1	3	0.205554
chr17	48196680	48196786	48196733	ENSG00000207306.1	-	snRNA	KNOWN	RNU6-1152P	1	1	0.243995
chr17	48294335	48308762	48301548	ENSG00000235300.4	+	antisense	KNOWN	THRA1/BTR	4	4	-0.421417
chr17	48377262	48380370	48378816	ENSG00000266222.1	-	sense_intronic	KNOWN	RP11-433M22.1	1	2	0.173063
chr17	48382370	48382586	48382478	ENSG00000280959.1	-	snoRNA	NOVEL	ACEA_U3	1	1	0.173063
chr17	48382371	48382586	48382478	ENSG00000200538.2	-	snoRNA	NOVEL	U3	1	1	0.173063
chr17	48460370	48466040	48463205	ENSG00000264451.1	+	lincRNA	KNOWN	RP11-433M22.2	1	2	0.259449
chr17	48479097	48479198	48479147	ENSG00000206805.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.350851
chr17	48528526	48530997	48529761	ENSG00000120094.6	-	protein_coding	KNOWN	HOXB1	2	2	0.280240
chr17	48540894	48544989	48542941	ENSG00000173917.10	-	protein_coding	KNOWN	HOXB2	3	2	0.375785
chr17	48543551	48551250	48547400	ENSG00000230148.8	+	antisense	KNOWN	HOXB-AS1	4	7	0.360480
chr17	48548870	48604912	48576891	ENSG00000120093.11	-	protein_coding	KNOWN	HOXB3	13	6	0.399575
chr17	48549630	48606414	48578022	ENSG00000233101.10	+	antisense	KNOWN	HOXB-AS3	15	4	0.403037
chr17	48557262	48560333	48558797	ENSG00000239552.2	+	antisense	KNOWN	HOXB-AS2	1	2	0.281594
chr17	48575513	48580111	48577812	ENSG00000182742.5	-	protein_coding	KNOWN	HOXB4	1	2	0.430272
chr17	48579630	48582259	48580944	ENSG00000257178.3	-	sense_intronic	KNOWN	RP11-357H14.16	1	1	0.430272
chr17	48579838	48579947	48579892	ENSG00000274592.1	-	miRNA	KNOWN	MIR10A	1	1	0.430272
chr17	48591257	48593961	48592609	ENSG00000120075.5	-	protein_coding	KNOWN	HOXB5	1	2	0.518434
chr17	48595751	48604992	48600371	ENSG00000108511.9	-	protein_coding	KNOWN	HOXB6	4	4	0.518434
chr17	48607227	48633572	48620399	ENSG00000260027.4	-	protein_coding	KNOWN	HOXB7	3	2	0.559299
chr17	48611377	48614939	48613158	ENSG00000120068.6	-	protein_coding	KNOWN	HOXB8	3	2	0.569812
chr17	48621159	48626356	48623757	ENSG00000170689.9	-	protein_coding	KNOWN	HOXB9	1	2	0.569812
chr17	48628675	48634932	48631803	ENSG00000242207.1	+	antisense	KNOWN	HOXB-AS4	2	2	0.540123
chr17	48632490	48632559	48632524	ENSG00000210741.1	-	miRNA	KNOWN	MIR196A1	1	1	0.532154
chr17	48635923	48647023	48641473	ENSG00000272763.1	-	lincRNA	KNOWN	RP11-357H14.17	3	3	0.532154
chr17	48646923	48707346	48677134	ENSG00000244649.4	+	lincRNA	KNOWN	CTD-2377D24.6	6	6	0.417649
chr17	48690481	48690624	48690552	ENSG00000244559.1	-	processed_pseudogene	KNOWN	CTD-2377D24.2	1	1	0.137554
chr17	48691116	48691694	48691405	ENSG00000242067.1	-	processed_pseudogene	KNOWN	RPL9P28	1	1	0.137554
chr17	48713730	48713959	48713844	ENSG00000241788.2	+	processed_pseudogene	KNOWN	COX6B1P2	1	1	0.483183
chr17	48721719	48722522	48722120	ENSG00000159182.4	-	protein_coding	KNOWN	PRAC1	1	2	0.483183
chr17	48723168	48724758	48723963	ENSG00000229637.3	+	protein_coding	KNOWN	PRAC2	2	2	0.483183
chr17	48723188	48723314	48723251	ENSG00000273750.1	+	misc_RNA	NOVEL	HOXB13-AS1_1	1	1	0.483183
chr17	48723692	48723772	48723732	ENSG00000277542.1	+	misc_RNA	NOVEL	HOXB13-AS1_2	1	1	0.483183
chr17	48724408	48724475	48724441	ENSG00000263602.1	-	miRNA	KNOWN	MIR3185	1	1	0.483183
chr17	48724763	48729178	48726970	ENSG00000159184.7	-	protein_coding	KNOWN	HOXB13	1	2	0.483183
chr17	48733091	48733888	48733489	ENSG00000242407.1	+	lincRNA	KNOWN	CTD-2377D24.4	1	2	0.581474
chr17	48762235	48817214	48789724	ENSG00000170703.15	-	protein_coding	KNOWN	TTLL6	9	16	0.545904
chr17	48765554	48765847	48765700	ENSG00000244514.3	-	misc_RNA	KNOWN	RN7SL125P	1	1	0.789848
chr17	48830988	48866522	48848755	ENSG00000136436.14	+	protein_coding	KNOWN	CALCOCO2	28	14	0.609456
chr17	48874860	48908983	48891921	ENSG00000248278.1	-	transcribed_processed_pseudogene	KNOWN	SUMO2P17	2	4	0.661627
chr17	48880840	48880967	48880903	ENSG00000212565.1	+	snoRNA	NOVEL	SNORA68	1	1	0.446949
chr17	48881122	48881316	48881219	ENSG00000248895.1	+	processed_pseudogene	KNOWN	RP11-463M16.5	1	1	0.446949
chr17	48892765	48895871	48894318	ENSG00000159199.13	+	protein_coding	KNOWN	ATP5G1	10	5	0.832825
chr17	48899131	48899748	48899439	ENSG00000270781.1	+	processed_pseudogene	KNOWN	RP11-501C14.9	1	2	0.832825
chr17	48908369	48929056	48918712	ENSG00000159202.17	+	protein_coding	KNOWN	UBE2Z	8	7	0.825665
chr17	48929316	48945117	48937216	ENSG00000159210.9	-	protein_coding	KNOWN	SNF8	17	9	0.827219
chr17	48931791	48937100	48934445	ENSG00000230532.1	+	antisense	KNOWN	AC091133.1	1	3	0.827317
chr17	48949361	48949520	48949440	ENSG00000200903.1	-	snRNA	KNOWN	RNU1-42P	1	1	0.827317
chr17	48956650	48956753	48956701	ENSG00000238804.1	-	snoRNA	NOVEL	snoU13	1	1	1.120115
chr17	48958554	48968596	48963575	ENSG00000159224.4	-	protein_coding	KNOWN	GIP	1	6	1.120115
chr17	48995266	48997492	48996379	ENSG00000250838.1	-	antisense	KNOWN	RP11-501C14.5	1	3	0.647610
chr17	48997412	49055650	49026531	ENSG00000159217.9	+	protein_coding	KNOWN	IGF2BP1	6	15	0.834869
chr17	49004731	49013725	49009228	ENSG00000251461.3	-	antisense	KNOWN	RP11-501C14.6	1	4	0.726736
chr17	49017793	49018061	49017927	ENSG00000255851.2	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.838608
chr17	49036352	49036455	49036403	ENSG00000252636.1	+	snRNA	KNOWN	RNU6-826P	1	1	0.951619
chr17	49037122	49037429	49037275	ENSG00000251550.1	+	processed_pseudogene	KNOWN	RP11-501C14.7	1	1	0.951619
chr17	49049540	49049624	49049582	ENSG00000264552.1	+	miRNA	NOVEL	AC105030.1	1	1	0.951619
chr17	49085511	49086702	49086106	ENSG00000248883.2	+	unprocessed_pseudogene	KNOWN	B4GALNT2P1	1	2	0.597416
chr17	49132460	49176840	49154650	ENSG00000167080.8	+	protein_coding	KNOWN	B4GALNT2	3	11	0.647885
chr17	49148339	49149111	49148725	ENSG00000240995.2	-	processed_pseudogene	KNOWN	RP11-708H21.1	1	2	0.365493
chr17	49202791	49210574	49206682	ENSG00000167083.6	-	protein_coding	KNOWN	GNGT2	6	4	0.597869
chr17	49210227	49223225	49216726	ENSG00000108798.8	+	protein_coding	KNOWN	ABI3	4	8	0.975739
chr17	49223362	49230766	49227064	ENSG00000173868.11	-	protein_coding	KNOWN	PHOSPHO1	7	4	0.974778
chr17	49248239	49258662	49253450	ENSG00000177369.8	+	processed_transcript	KNOWN	FLJ40194	3	4	0.922774
chr17	49288346	49288454	49288400	ENSG00000273500.1	-	miRNA	KNOWN	MIR6129	1	1	0.898016
chr17	49289206	49362473	49325839	ENSG00000198740.8	-	protein_coding	KNOWN	ZNF652	4	8	0.505506
chr17	49325840	49325901	49325870	ENSG00000281414.1	-	snRNA	NOVEL	U7	1	1	0.315498
chr17	49361165	49369998	49365581	ENSG00000248714.6	+	lincRNA	KNOWN	RP11-1079K10.3	3	3	0.689233
chr17	49370740	49476988	49423864	ENSG00000262039.1	+	antisense	KNOWN	RP11-81K2.1	1	3	0.849870
chr17	49375380	49380094	49377737	ENSG00000250948.1	+	antisense	KNOWN	RP11-1079K10.2	1	2	0.735135
chr17	49400429	49400800	49400614	ENSG00000186244.7	-	processed_pseudogene	KNOWN	RP11-1079K10.1	1	1	0.660080
chr17	49404049	49414905	49409477	ENSG00000167085.11	-	protein_coding	KNOWN	PHB	15	8	0.756594
chr17	49404081	49405197	49404639	ENSG00000250186.3	+	antisense	KNOWN	RP11-1079K10.4	1	2	0.660080
chr17	49408209	49408427	49408318	ENSG00000281126.1	+	protein_coding	KNOWN	AC091180.1	1	2	0.660080
chr17	49416744	49416850	49416797	ENSG00000207127.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.873646
chr17	49424269	49424922	49424595	ENSG00000229944.3	-	processed_pseudogene	KNOWN	EIF4EP2	1	1	0.873646
chr17	49457861	49461749	49459805	ENSG00000249497.1	-	lincRNA	KNOWN	RP11-1079K10.5	1	3	1.109374
chr17	49494223	49497800	49496011	ENSG00000279036.1	-	TEC	KNOWN	RP11-81K2.2	1	1	0.864186
chr17	49495293	49515017	49505155	ENSG00000064300.8	+	protein_coding	KNOWN	NGFR	3	6	0.904587
chr17	49505657	49574064	49539860	ENSG00000249906.1	-	antisense	KNOWN	RP5-1029K10.2	1	3	0.927191
chr17	49510817	49510900	49510858	ENSG00000277478.1	+	miRNA	KNOWN	MIR6165	1	1	1.022989
chr17	49544847	49577962	49561404	ENSG00000250310.1	-	antisense	KNOWN	RP5-1029K10.4	1	2	0.883166
chr17	49561002	49561085	49561043	ENSG00000252789.1	-	miRNA	NOVEL	AC006487.1	1	1	0.802485
chr17	49575858	49583827	49579842	ENSG00000182575.7	+	protein_coding	KNOWN	NXPH3	3	3	1.045299
chr17	49598884	49678234	49638559	ENSG00000121067.17	-	protein_coding	KNOWN	SPOP	22	11	0.556344
chr17	49700943	49709014	49704978	ENSG00000121073.13	-	protein_coding	KNOWN	SLC35B1	19	9	0.801990
chr17	49708334	49720060	49714197	ENSG00000250751.1	+	antisense	KNOWN	RP11-613C6.2	1	2	0.999075
chr17	49710332	49789180	49749756	ENSG00000121104.7	-	protein_coding	KNOWN	FAM117A	12	8	0.793556
chr17	49788555	49835030	49811792	ENSG00000136504.11	+	protein_coding	KNOWN	KAT7	18	15	0.762206
chr17	49795343	49795669	49795506	ENSG00000235183.3	+	processed_pseudogene	KNOWN	RP11-613C6.4	1	1	0.811015
chr17	49834239	49836454	49835346	ENSG00000262837.1	+	lincRNA	KNOWN	RP11-304F15.7	1	2	0.880909
chr17	49838309	49848017	49843163	ENSG00000176358.15	-	protein_coding	KNOWN	TAC4	8	5	0.880909
chr17	49845910	49848837	49847373	ENSG00000204584.1	+	antisense	KNOWN	RP11-304F15.3	1	3	0.880909
chr17	49887598	49900893	49894245	ENSG00000248954.1	+	lincRNA	KNOWN	RP11-304F15.4	1	5	1.176545
chr17	49914403	49932918	49923660	ENSG00000254039.1	+	lincRNA	KNOWN	RP11-304F15.6	1	3	1.033574
chr17	49939122	49939819	49939470	ENSG00000249176.1	+	processed_pseudogene	KNOWN	RP11-304F15.5	1	1	1.141460
chr17	49966075	49966176	49966125	ENSG00000199492.1	-	snRNA	KNOWN	RNU6-1313P	1	1	0.980346
chr17	49968970	49974959	49971964	ENSG00000108813.10	+	protein_coding	KNOWN	DLX4	6	4	1.118166
chr17	49990005	49995224	49992614	ENSG00000064195.7	-	protein_coding	KNOWN	DLX3	2	3	1.184841
chr17	49996889	50016844	50006866	ENSG00000248172.1	+	lincRNA	KNOWN	RP11-1094H24.3	1	2	1.042911
chr17	50023661	50023794	50023727	ENSG00000281242.1	+	sRNA	NOVEL	Clostridiales-1	1	1	0.771076
chr17	50024129	50024285	50024207	ENSG00000280736.1	-	sRNA	NOVEL	Clostridiales-1	1	1	0.771076
chr17	50024408	50024572	50024490	ENSG00000281631.1	-	sRNA	NOVEL	Clostridiales-1	1	1	0.771076
chr17	50050349	50055739	50053044	ENSG00000246640.1	-	lincRNA	KNOWN	RP11-1094H24.4	1	3	1.204366
chr17	50055968	50090481	50073224	ENSG00000005884.17	+	protein_coding	KNOWN	ITGA3	16	26	1.461593
chr17	50094065	50094647	50094356	ENSG00000276851.1	+	lincRNA	KNOWN	RP5-875H18.9	1	1	1.596784
chr17	50094737	50112152	50103444	ENSG00000005882.11	+	protein_coding	KNOWN	PDK2	16	12	1.600685
chr17	50098460	50098899	50098679	ENSG00000275025.1	-	antisense	KNOWN	RP5-875H18.10	1	1	1.596784
chr17	50100704	50101920	50101312	ENSG00000250282.1	-	antisense	KNOWN	RP5-875H18.4	1	2	1.596784
chr17	50110040	50129882	50119961	ENSG00000167100.14	-	protein_coding	KNOWN	SAMD14	10	11	1.628336
chr17	50133735	50150630	50142182	ENSG00000108819.10	-	protein_coding	KNOWN	PPP1R9B	2	10	1.498184
chr17	50135586	50146176	50140881	ENSG00000236472.1	+	antisense	KNOWN	AC002401.1	1	4	1.495991
chr17	50158333	50161276	50159804	ENSG00000253730.1	-	antisense	KNOWN	RP11-893F2.13	1	2	1.554699
chr17	50163523	50165316	50164419	ENSG00000261959.1	-	antisense	KNOWN	RP11-893F2.14	1	1	1.554699
chr17	50164214	50175931	50170072	ENSG00000108823.15	+	protein_coding	KNOWN	SGCA	11	10	1.679366
chr17	50171428	50181178	50176303	ENSG00000188662.6	-	unitary_pseudogene	KNOWN	HILS1	2	2	1.800943
chr17	50183289	50201632	50192460	ENSG00000108821.13	-	protein_coding	KNOWN	COL1A1	13	51	2.105909
chr17	50208972	50214459	50211715	ENSG00000249406.1	+	lincRNA	KNOWN	RP11-893F2.5	1	5	1.898128
chr17	50212933	50215357	50214145	ENSG00000263176.1	-	lincRNA	KNOWN	RP11-893F2.15	1	3	1.809776
chr17	50214694	50215420	50215057	ENSG00000251085.1	+	lincRNA	KNOWN	RP11-893F2.6	1	3	1.809776
chr17	50235845	50236129	50235987	ENSG00000249838.1	+	processed_pseudogene	KNOWN	SUMO2P7	1	1	1.120888
chr17	50271406	50281485	50276445	ENSG00000167105.7	+	protein_coding	KNOWN	TMEM92	3	6	1.885707
chr17	50281577	50287855	50284716	ENSG00000251179.1	-	antisense	KNOWN	TMEM92-AS1	1	4	1.885707
chr17	50325345	50325442	50325393	ENSG00000274668.1	+	miRNA	NOVEL	AC015909.1	1	1	1.286720
chr17	50346092	50363138	50354615	ENSG00000015532.9	+	protein_coding	KNOWN	XYLT2	7	11	1.297174
chr17	50362967	50365232	50364099	ENSG00000279792.1	-	TEC	KNOWN	RP11-893F2.18	1	1	1.387448
chr17	50367857	50373214	50370535	ENSG00000108826.15	-	protein_coding	KNOWN	MRPL27	7	5	1.167558
chr17	50373220	50381483	50377351	ENSG00000154920.14	+	protein_coding	KNOWN	EME1	10	9	1.021056
chr17	50375059	50397553	50386306	ENSG00000108829.9	-	protein_coding	KNOWN	LRRC59	3	7	1.061490
chr17	50386145	50386246	50386195	ENSG00000206824.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.021056
chr17	50396438	50397888	50397163	ENSG00000253102.1	+	antisense	KNOWN	RP1-117B12.4	1	2	1.141460
chr17	50426158	50474845	50450501	ENSG00000167107.12	+	protein_coding	KNOWN	ACSF2	25	17	1.011335
chr17	50450179	50450725	50450452	ENSG00000262759.1	-	processed_pseudogene	KNOWN	MRPS21P9	1	2	0.911682
chr17	50464496	50468966	50466731	ENSG00000136457.9	-	protein_coding	KNOWN	CHAD	3	4	0.911682
chr17	50475819	50478391	50477105	ENSG00000275897.1	+	lincRNA	KNOWN	RP11-94C24.13	1	1	1.040391
chr17	50478800	50485975	50482387	ENSG00000136444.9	+	protein_coding	KNOWN	RSAD1	8	9	1.040391
chr17	50503412	50508328	50505870	ENSG00000249451.1	-	lincRNA	KNOWN	RP11-94C24.6	1	2	1.115375
chr17	50508384	50531501	50519942	ENSG00000136449.13	+	protein_coding	KNOWN	MYCBPAP	14	21	0.974365
chr17	50532543	50543750	50538146	ENSG00000049283.17	+	protein_coding	KNOWN	EPN3	18	10	0.918660
chr17	50537294	50538754	50538024	ENSG00000250286.1	-	processed_transcript	KNOWN	RP11-94C24.8	2	3	0.918660
chr17	50543058	50555852	50549455	ENSG00000006282.20	+	protein_coding	KNOWN	SPATA20	28	18	1.110206
chr17	50556207	50562108	50559157	ENSG00000250107.1	-	antisense	KNOWN	CACNA1G-AS1	3	2	1.337358
chr17	50561068	50627474	50594271	ENSG00000006283.17	+	protein_coding	KNOWN	CACNA1G	34	38	1.264856
chr17	50563203	50563783	50563493	ENSG00000250976.1	-	antisense	KNOWN	RP11-94C24.11	1	2	1.337358
chr17	50627032	50631940	50629486	ENSG00000251239.1	-	antisense	KNOWN	CTB-22K21.2	1	2	1.209319
chr17	50634777	50692252	50663514	ENSG00000108846.15	+	protein_coding	KNOWN	ABCC3	18	31	1.271366
chr17	50693190	50707924	50700557	ENSG00000154945.6	-	protein_coding	KNOWN	ANKRD40	3	5	1.220778
chr17	50693448	50695449	50694448	ENSG00000262967.1	+	antisense	KNOWN	RP11-294J22.6	1	2	1.220778
chr17	50696644	50696760	50696702	ENSG00000201340.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.220778
chr17	50719544	50756213	50737878	ENSG00000108848.15	+	protein_coding	KNOWN	LUC7L3	23	11	0.598662
chr17	50722074	50724224	50723149	ENSG00000278963.1	+	TEC	KNOWN	RP11-294J22.7	1	1	1.017991
chr17	50761029	50767557	50764293	ENSG00000167117.8	-	processed_transcript	KNOWN	LINC00483	5	4	0.594492
chr17	50768650	50768730	50768690	ENSG00000278672.1	+	miRNA	KNOWN	MIR8059	1	1	0.594492
chr17	50797366	50797651	50797508	ENSG00000248702.1	-	processed_pseudogene	KNOWN	RP11-294J22.5	1	1	0.893705
chr17	50834650	50842348	50838499	ENSG00000173714.7	+	protein_coding	KNOWN	WFIKKN2	2	2	0.754174
chr17	50840057	50841626	50840841	ENSG00000261976.2	-	antisense	KNOWN	RP11-506D12.5	1	2	0.754174
chr17	50847950	50849270	50848610	ENSG00000243521.2	+	processed_pseudogene	KNOWN	RPL5P33	1	2	0.754174
chr17	50862223	50867978	50865100	ENSG00000141232.4	-	protein_coding	KNOWN	TOB1	3	3	0.795460
chr17	50866679	50909737	50888208	ENSG00000229980.4	+	processed_transcript	KNOWN	TOB1-AS1	4	5	0.594607
chr17	50909637	50910232	50909934	ENSG00000262006.1	-	lincRNA	KNOWN	RP11-700H6.4	1	2	0.652045
chr17	50934989	50944713	50939851	ENSG00000247011.2	-	lincRNA	KNOWN	RP11-700H6.1	1	2	0.786903
chr17	50944104	50948750	50946427	ENSG00000251665.1	+	lincRNA	KNOWN	RP11-700H6.2	2	2	0.786903
chr17	50962174	51120865	51041519	ENSG00000008294.20	-	protein_coding	KNOWN	SPAG9	22	30	0.458272
chr17	51042524	51085471	51063997	ENSG00000249870.1	+	antisense	KNOWN	RP11-481C4.1	1	3	0.357157
chr17	51153536	51162428	51157982	ENSG00000239672.7	+	protein_coding	KNOWN	NME1	10	6	0.492530
chr17	51153590	51171744	51162667	ENSG00000011052.21	+	protein_coding	KNOWN	NME1-NME2	3	9	0.485465
chr17	51165435	51171747	51168591	ENSG00000243678.11	+	protein_coding	KNOWN	NME2	9	5	0.472176
chr17	51177425	51260163	51218794	ENSG00000011258.15	-	protein_coding	KNOWN	MBTD1	7	17	0.226116
chr17	51183191	51186403	51184797	ENSG00000279089.1	-	TEC	KNOWN	RP11-481C4.2	1	1	0.419033
chr17	51249579	51251748	51250663	ENSG00000264895.1	-	sense_intronic	KNOWN	RP11-421E14.2	1	1	0.344560
chr17	51260528	51297936	51279232	ENSG00000011260.13	+	protein_coding	KNOWN	UTP18	7	14	0.023779
chr17	51312609	51335165	51323887	ENSG00000249383.1	-	lincRNA	KNOWN	RP11-1018N14.1	1	6	-0.062485
chr17	51332679	51334090	51333384	ENSG00000249982.1	+	lincRNA	KNOWN	RP11-1018N14.3	1	2	0.202045
chr17	51335261	51336240	51335750	ENSG00000249658.1	+	lincRNA	KNOWN	RP11-1018N14.4	1	2	0.202045
chr17	51336715	51342571	51339643	ENSG00000225860.2	+	lincRNA	KNOWN	RP11-1018N14.2	1	3	0.202045
chr17	51435427	51445802	51440614	ENSG00000267452.1	+	lincRNA	KNOWN	RP11-1018N14.5	2	3	0.091992
chr17	51502488	51503233	51502860	ENSG00000187504.6	-	processed_pseudogene	KNOWN	RPL7P48	1	1	-0.072128
chr17	51630313	52160017	51895165	ENSG00000154975.13	-	protein_coding	KNOWN	CA10	9	10	-0.197701
chr17	51761260	51763397	51762328	ENSG00000279743.1	-	TEC	KNOWN	CTB-43I4.1	1	1	0.001018
chr17	51831646	51831733	51831689	ENSG00000280846.1	+	miRNA	NOVEL	AC004108.1	1	1	-0.101578
chr17	52390515	52535701	52463108	ENSG00000263317.1	+	lincRNA	KNOWN	RP11-429O1.1	1	4	-0.293727
chr17	52862121	52899588	52880854	ENSG00000226364.1	+	lincRNA	KNOWN	AC102948.2	1	3	-0.531776
chr17	52985520	52987652	52986586	ENSG00000227011.3	+	lincRNA	KNOWN	C17orf112	1	4	-0.229936
chr17	53105734	53106358	53106046	ENSG00000262902.1	+	processed_pseudogene	KNOWN	MTCO1P40	1	1	-0.257016
chr17	53106069	53106157	53106113	ENSG00000276078.1	-	miRNA	NOVEL	AC091154.1	1	1	-0.257016
chr17	53353427	53354134	53353780	ENSG00000263252.1	-	processed_pseudogene	KNOWN	RP11-146P2.1	1	1	-0.106422
chr17	53434131	53435829	53434980	ENSG00000262271.1	+	processed_pseudogene	KNOWN	CTD-2535P7.1	1	3	-0.402773
chr17	53438556	53439721	53439138	ENSG00000262518.1	+	processed_pseudogene	KNOWN	CTD-2535P7.2	1	2	-0.402773
chr17	53537514	53537604	53537559	ENSG00000221534.2	+	miRNA	NOVEL	AC090079.1	1	1	-0.444509
chr17	53681630	53682111	53681870	ENSG00000262384.1	-	processed_pseudogene	KNOWN	RP11-312B18.1	1	1	-0.013361
chr17	53756989	53757870	53757429	ENSG00000233380.1	-	processed_pseudogene	KNOWN	RPS2P48	1	1	-0.450158
chr17	53822901	53825213	53824057	ENSG00000141200.7	+	protein_coding	KNOWN	KIF2B	1	1	-0.522983
chr17	53952936	53955324	53954130	ENSG00000263189.1	+	processed_pseudogene	KNOWN	RP11-618P13.1	1	1	-0.402773
chr17	54477796	54478168	54477982	ENSG00000261965.1	+	processed_pseudogene	KNOWN	ISCA1P3	1	1	-0.302287
chr17	54702936	54703430	54703183	ENSG00000263199.1	+	processed_pseudogene	KNOWN	RP11-372K20.1	1	1	-0.650357
chr17	54754165	54754649	54754407	ENSG00000263125.1	-	processed_pseudogene	KNOWN	ARL2BPP8	1	1	-0.179035
chr17	54770949	54771277	54771113	ENSG00000251809.1	+	misc_RNA	KNOWN	RN7SKP14	1	1	-0.289879
chr17	54899387	54961956	54930671	ENSG00000141198.13	+	protein_coding	KNOWN	TOM1L1	23	16	0.181484
chr17	54951902	54968785	54960343	ENSG00000166260.10	-	protein_coding	KNOWN	COX11	9	5	0.573644
chr17	54956760	54958426	54957593	ENSG00000279059.1	-	TEC	KNOWN	RP11-257O5.2	1	1	0.573644
chr17	54964474	54964679	54964576	ENSG00000275710.1	+	antisense	KNOWN	RP11-257O5.4	1	1	0.573644
chr17	54968727	55173632	55071179	ENSG00000166263.13	+	protein_coding	KNOWN	STXBP4	8	18	-0.297568
chr17	55265012	55325065	55295038	ENSG00000108924.13	+	protein_coding	KNOWN	HLF	11	4	-0.063991
chr17	55271504	55273653	55272578	ENSG00000263096.1	-	antisense	KNOWN	RP11-515O17.2	1	2	-0.129181
chr17	55325757	55327791	55326774	ENSG00000262079.1	-	lincRNA	KNOWN	RP11-515O17.3	1	2	0.024878
chr17	55392613	55421992	55407302	ENSG00000108960.7	-	protein_coding	KNOWN	MMD	3	7	-0.059180
chr17	55454046	55458450	55456248	ENSG00000262395.1	-	lincRNA	KNOWN	RP11-515E23.2	1	2	0.084256
chr17	55468066	55510938	55489502	ENSG00000261873.1	-	lincRNA	KNOWN	RP11-515E23.1	1	4	0.033565
chr17	55526964	55561577	55544270	ENSG00000236319.2	-	transcribed_processed_pseudogene	KNOWN	CTD-2033D24.2	2	4	-0.203144
chr17	55550931	55551649	55551290	ENSG00000262135.1	-	processed_pseudogene	KNOWN	GARSP1	1	1	0.003455
chr17	55551810	55551920	55551865	ENSG00000200107.1	+	snRNA	KNOWN	RNU6-1249P	1	1	0.003455
chr17	55719627	55732121	55725874	ENSG00000166292.11	-	protein_coding	KNOWN	TMEM100	6	4	-0.080240
chr17	55750979	55842830	55796904	ENSG00000141179.13	+	protein_coding	KNOWN	PCTP	8	6	0.007698
chr17	55842677	55872939	55857808	ENSG00000262052.1	-	lincRNA	KNOWN	RP11-763E3.1	1	3	-0.205475
chr17	56054787	56054886	56054836	ENSG00000264277.1	+	miRNA	NOVEL	AC011073.1	1	1	-0.115700
chr17	56110958	56511659	56311308	ENSG00000153930.10	+	protein_coding	KNOWN	ANKFN1	8	20	0.033688
chr17	56236720	56236810	56236765	ENSG00000274924.1	+	miRNA	NOVEL	AC006925.1	1	1	0.071382
chr17	56368063	56368215	56368139	ENSG00000261882.1	+	processed_pseudogene	KNOWN	RP11-502F1.2	1	1	-0.221899
chr17	56471142	56473647	56472394	ENSG00000279606.1	+	TEC	KNOWN	RP11-502F1.1	1	1	-0.126188
chr17	56573040	56573195	56573117	ENSG00000243058.1	+	processed_pseudogene	KNOWN	RPL39P33	1	1	-0.108148
chr17	56593699	56595590	56594644	ENSG00000183691.4	+	protein_coding	KNOWN	NOG	1	1	0.253355
chr17	56791913	56838773	56815343	ENSG00000214226.8	-	protein_coding	KNOWN	C17orf67	3	8	0.246026
chr17	56834099	56869567	56851833	ENSG00000153933.9	+	protein_coding	KNOWN	DGKE	6	12	-0.079151
chr17	56871170	56871276	56871223	ENSG00000212469.1	+	snRNA	KNOWN	RNU6-1158P	1	1	-0.194889
chr17	56884639	56884819	56884729	ENSG00000262408.1	-	processed_pseudogene	KNOWN	RP11-670E13.3	1	1	-0.194889
chr17	56887909	56914038	56900973	ENSG00000121060.14	-	protein_coding	KNOWN	TRIM25	9	10	0.503986
chr17	56888880	56891841	56890360	ENSG00000262112.1	+	antisense	KNOWN	RP11-670E13.5	1	2	0.294108
chr17	56891270	56891355	56891312	ENSG00000265238.1	-	miRNA	KNOWN	MIR3614	1	1	0.591170
chr17	56914186	56914533	56914359	ENSG00000274213.1	+	lincRNA	KNOWN	RP11-670E13.6	1	1	0.433911
chr17	56938187	56961054	56949620	ENSG00000121058.4	-	protein_coding	KNOWN	COIL	2	7	0.235776
chr17	56939932	56941275	56940603	ENSG00000262298.1	+	antisense	KNOWN	RP5-1107A17.3	1	2	0.133097
chr17	56951664	56952404	56952034	ENSG00000262623.1	+	processed_pseudogene	KNOWN	RP5-1107A17.2	1	2	0.345485
chr17	56978105	57006768	56992436	ENSG00000121064.12	+	protein_coding	KNOWN	SCPEP1	16	13	0.167472
chr17	56982749	56985104	56983926	ENSG00000263120.1	+	sense_intronic	KNOWN	RP5-1107A17.4	1	1	-0.008120
chr17	57045478	57046797	57046137	ENSG00000261192.1	+	transcribed_processed_pseudogene	KNOWN	RNF126P1	2	1	-0.038510
chr17	57078298	57085024	57081661	ENSG00000263004.1	-	lincRNA	KNOWN	RP11-166P13.3	2	3	-0.004761
chr17	57085092	57121349	57103220	ENSG00000121057.12	+	protein_coding	KNOWN	AKAP1	19	12	0.392188
chr17	57092145	57096425	57094285	ENSG00000263089.1	-	antisense	KNOWN	RP11-166P13.4	1	1	0.300100
chr17	57255851	57684685	57470268	ENSG00000153944.10	+	protein_coding	KNOWN	MSI2	19	14	0.443469
chr17	57277920	57280017	57278968	ENSG00000279555.1	+	TEC	KNOWN	RP11-426D19.1	1	1	0.311109
chr17	57448218	57450291	57449254	ENSG00000279281.1	+	TEC	KNOWN	RP11-226M10.3	1	1	0.494374
chr17	57488508	57488598	57488553	ENSG00000278285.1	-	miRNA	NOVEL	AC015883.1	1	1	0.941907
chr17	57522248	57523597	57522922	ENSG00000266100.1	-	antisense	KNOWN	RP11-118E18.2	1	3	0.393260
chr17	57531769	57532355	57532062	ENSG00000280028.1	+	TEC	KNOWN	RP11-118E18.1	1	1	0.552896
chr17	57600856	57608412	57604634	ENSG00000263499.1	-	antisense	KNOWN	RP11-118E18.4	1	3	0.618538
chr17	57618108	57618393	57618250	ENSG00000242889.3	+	misc_RNA	KNOWN	RN7SL449P	1	1	0.285529
chr17	57685529	57685592	57685560	ENSG00000238447.1	-	snRNA	KNOWN	RNU7-134P	1	1	0.509043
chr17	57744481	57745312	57744896	ENSG00000166329.2	-	protein_coding	KNOWN	CCDC182	1	1	0.567330
chr17	57771946	57834749	57803347	ENSG00000265542.5	-	lincRNA	KNOWN	RP11-60A24.3	2	3	0.248374
chr17	57789449	57789732	57789590	ENSG00000222976.1	+	misc_RNA	KNOWN	RN7SKP94	1	1	0.573755
chr17	57834781	57850056	57842418	ENSG00000181610.12	-	protein_coding	KNOWN	MRPS23	4	5	0.333597
chr17	57861243	57955323	57908283	ENSG00000180891.12	-	protein_coding	KNOWN	CUEDC1	13	11	0.799804
chr17	57912333	57922581	57917457	ENSG00000264914.1	+	antisense	KNOWN	RP11-343K8.3	2	2	0.666462
chr17	57955965	57956143	57956054	ENSG00000278642.1	+	lincRNA	KNOWN	RP11-159D12.11	1	1	0.781291
chr17	57971547	57988259	57979903	ENSG00000136451.8	-	protein_coding	KNOWN	VEZF1	4	6	0.458263
chr17	57988180	57988760	57988470	ENSG00000280233.1	+	TEC	KNOWN	RP11-159D12.3	1	1	0.458263
chr17	57989038	58005253	57997145	ENSG00000266086.1	-	protein_coding	KNOWN	RP11-159D12.5	1	3	0.548908
chr17	57989039	57994850	57991944	ENSG00000264112.1	-	lincRNA	KNOWN	RP11-159D12.2	3	2	0.538701
chr17	58003360	58007346	58005353	ENSG00000136450.12	-	protein_coding	KNOWN	SRSF1	9	5	0.554619
chr17	58006674	58008187	58007430	ENSG00000279069.1	+	TEC	KNOWN	RP11-159D12.6	1	1	0.554619
chr17	58076891	58083204	58080047	ENSG00000266290.1	-	lincRNA	KNOWN	RP11-159D12.10	1	3	0.317652
chr17	58083415	58095536	58089475	ENSG00000264364.2	+	protein_coding	KNOWN	DYNLL2	1	3	0.414990
chr17	58095672	58101479	58098575	ENSG00000279207.1	+	TEC	KNOWN	RP11-159D12.8	1	1	0.530734
chr17	58155133	58156156	58155644	ENSG00000141194.5	+	protein_coding	KNOWN	OR4D1	1	1	0.041068
chr17	58157028	58157800	58157414	ENSG00000229590.3	+	processed_pseudogene	KNOWN	MSX2P1	1	1	0.041068
chr17	58169656	58170579	58170117	ENSG00000255713.1	+	protein_coding	KNOWN	OR4D2	1	1	-0.166404
chr17	58192737	58205174	58198955	ENSG00000121053.5	+	protein_coding	KNOWN	EPX	1	13	0.453700
chr17	58202352	58203003	58202677	ENSG00000278627.1	-	antisense	KNOWN	RP11-506H21.5	1	1	0.453700
chr17	58205437	58219605	58212521	ENSG00000011143.16	-	protein_coding	KNOWN	MKS1	13	18	0.374315
chr17	58218548	58268518	58243533	ENSG00000167419.10	+	protein_coding	KNOWN	LPO	11	13	0.291132
chr17	58269856	58280935	58275395	ENSG00000005381.7	-	protein_coding	KNOWN	MPO	5	12	0.410457
chr17	58301228	58328760	58314994	ENSG00000005379.15	-	protein_coding	KNOWN	BZRAP1	11	32	0.556403
chr17	58325450	58415766	58370608	ENSG00000265148.5	+	antisense	KNOWN	BZRAP1-AS1	11	5	0.145641
chr17	58330884	58332508	58331696	ENSG00000265206.3	-	antisense	KNOWN	RP5-1171I10.5	1	1	0.710718
chr17	58331215	58331325	58331270	ENSG00000273667.1	-	miRNA	KNOWN	MIR142	1	1	0.710718
chr17	58335976	58336022	58335999	ENSG00000264399.1	-	miRNA	KNOWN	MIR4736	1	1	0.710718
chr17	58345175	58353093	58349134	ENSG00000213246.6	-	protein_coding	KNOWN	SUPT4H1	7	6	0.484309
chr17	58352500	58417595	58385047	ENSG00000108375.12	-	protein_coding	KNOWN	RNF43	8	10	-0.083865
chr17	58420167	58488384	58454275	ENSG00000176160.9	-	protein_coding	KNOWN	HSF5	2	7	-0.184947
chr17	58456124	58456214	58456169	ENSG00000266051.1	-	miRNA	NOVEL	AC023992.1	1	1	-0.084165
chr17	58476138	58476950	58476544	ENSG00000266648.1	-	processed_pseudogene	KNOWN	SETP3	1	1	-0.287422
chr17	58489529	58517905	58503717	ENSG00000108389.9	-	protein_coding	KNOWN	MTMR4	10	19	0.133279
chr17	58519837	58556977	58538407	ENSG00000264672.5	+	antisense	KNOWN	SEPT4-AS1	3	5	0.444113
chr17	58520250	58540818	58530534	ENSG00000108387.14	-	protein_coding	KNOWN	SEPT4	29	13	0.514017
chr17	58541587	58544368	58542977	ENSG00000181013.3	-	protein_coding	KNOWN	C17orf47	1	2	0.566811
chr17	58556678	58692055	58624366	ENSG00000121101.15	-	protein_coding	KNOWN	TEX14	6	33	0.124347
chr17	58631641	58631836	58631738	ENSG00000212195.2	-	snoRNA	NOVEL	U3	1	1	0.189688
chr17	58660580	58661599	58661089	ENSG00000266826.1	-	processed_pseudogene	KNOWN	CTD-2200P10.1	1	1	0.337644
chr17	58666537	58666697	58666617	ENSG00000199426.1	-	snRNA	KNOWN	RNU1-108P	1	1	0.337644
chr17	58675286	58675462	58675374	ENSG00000266561.2	+	processed_pseudogene	KNOWN	CTD-2200P10.3	1	1	0.210869
chr17	58677574	58677737	58677655	ENSG00000206917.1	-	snRNA	KNOWN	RNU1-52P	1	1	0.210869
chr17	58679527	58679690	58679608	ENSG00000200997.1	-	snRNA	KNOWN	RNU1-85P	1	1	0.210869
chr17	58692573	58735611	58714092	ENSG00000108384.14	+	protein_coding	KNOWN	RAD51C	18	9	0.133985
chr17	58747055	58747340	58747197	ENSG00000274198.1	+	lincRNA	KNOWN	RP11-579A4.1	1	1	0.057016
chr17	58755869	58985176	58870522	ENSG00000175175.5	+	protein_coding	KNOWN	PPM1E	1	7	-0.100817
chr17	58785323	58785608	58785465	ENSG00000276601.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.208875
chr17	58835899	58835994	58835946	ENSG00000251865.1	+	snRNA	KNOWN	RNU6-518P	1	1	-0.055854
chr17	58897776	58899692	58898734	ENSG00000241462.1	+	processed_pseudogene	KNOWN	RP11-579O24.1	1	2	0.020290
chr17	58951185	58951513	58951349	ENSG00000275680.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.186940
chr17	58965952	58966727	58966339	ENSG00000263938.1	+	sense_intronic	KNOWN	RP11-579O24.3	1	1	0.186940
chr17	58982638	59106921	59044779	ENSG00000108395.13	-	protein_coding	KNOWN	TRIM37	14	25	0.093138
chr17	58988868	58988954	58988911	ENSG00000216168.1	-	miRNA	NOVEL	AC100832.1	1	1	0.091992
chr17	59059226	59059493	59059359	ENSG00000263558.2	+	misc_RNA	KNOWN	RN7SL716P	1	1	0.175408
chr17	59106598	59118267	59112432	ENSG00000224738.1	+	antisense	KNOWN	AC099850.1	1	2	0.304701
chr17	59109951	59155269	59132610	ENSG00000182628.12	-	protein_coding	KNOWN	SKA2	10	5	0.411354
chr17	59129276	59129458	59129367	ENSG00000252212.1	-	snRNA	KNOWN	RNU2-58P	1	1	0.382334
chr17	59137758	59137872	59137815	ENSG00000211514.1	-	miRNA	KNOWN	MIR454	1	1	0.452492
chr17	59151136	59151221	59151178	ENSG00000207996.1	-	miRNA	KNOWN	MIR301A	1	1	0.368053
chr17	59155499	59204705	59180102	ENSG00000068489.12	+	protein_coding	KNOWN	PRR11	9	11	0.372858
chr17	59174983	59181787	59178385	ENSG00000266537.1	-	unprocessed_pseudogene	KNOWN	SPDYE22P	1	5	0.415647
chr17	59197566	59215226	59206396	ENSG00000265303.1	+	protein_coding	KNOWN	CTD-2510F5.6	1	3	0.283559
chr17	59202677	59203829	59203253	ENSG00000265415.1	-	antisense	KNOWN	CTD-2510F5.4	1	2	0.319402
chr17	59209400	59215247	59212323	ENSG00000167447.12	+	protein_coding	KNOWN	SMG8	6	5	0.210707
chr17	59220467	59275967	59248217	ENSG00000153982.10	+	protein_coding	KNOWN	GDPD1	7	10	0.310860
chr17	59260748	59260846	59260797	ENSG00000207235.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.174928
chr17	59281130	59281343	59281236	ENSG00000271063.1	+	processed_pseudogene	KNOWN	SNRPGP17	1	1	0.247270
chr17	59331689	59401729	59366709	ENSG00000175155.8	+	protein_coding	KNOWN	YPEL2	5	5	0.321616
chr17	59362665	59363278	59362971	ENSG00000278863.1	+	TEC	KNOWN	RP11-567L7.3	1	1	0.355026
chr17	59366083	59366154	59366118	ENSG00000263857.1	+	miRNA	KNOWN	MIR4729	1	1	0.355026
chr17	59400488	59403303	59401895	ENSG00000266002.1	-	antisense	KNOWN	RP11-567L7.5	1	2	0.203885
chr17	59430869	59526946	59478907	ENSG00000265313.5	-	lincRNA	KNOWN	LINC01476	2	3	0.300745
chr17	59537359	59537499	59537429	ENSG00000200889.1	-	snRNA	KNOWN	RNU4-13P	1	1	0.202175
chr17	59565525	59608345	59586935	ENSG00000108406.9	+	protein_coding	KNOWN	DHX40	10	18	0.266872
chr17	59618553	59619714	59619133	ENSG00000273702.1	-	lincRNA	KNOWN	RP11-758H9.2	1	1	-0.019040
chr17	59619689	59696956	59658322	ENSG00000141367.11	+	protein_coding	KNOWN	CLTC	15	32	0.170441
chr17	59674636	59707626	59691131	ENSG00000141378.14	-	protein_coding	KNOWN	PTRH2	5	3	0.258699
chr17	59707192	59842255	59774723	ENSG00000062716.10	+	protein_coding	KNOWN	VMP1	17	12	0.446327
chr17	59784813	59785035	59784924	ENSG00000267637.1	+	sense_intronic	KNOWN	RP11-619I22.1	1	1	0.302759
chr17	59841266	59841337	59841301	ENSG00000199004.1	+	miRNA	KNOWN	MIR21	1	1	0.595566
chr17	59847438	59847544	59847491	ENSG00000201524.1	-	snRNA	KNOWN	RNU6-450P	1	1	0.595566
chr17	59859482	59892945	59876213	ENSG00000108423.14	-	protein_coding	KNOWN	TUBD1	16	9	0.678641
chr17	59885015	59885552	59885283	ENSG00000270264.1	+	processed_pseudogene	KNOWN	NDUFB8P2	1	1	0.444152
chr17	59893046	59950564	59921805	ENSG00000108443.13	+	protein_coding	KNOWN	RPS6KB1	12	16	0.520254
chr17	59912197	59912366	59912281	ENSG00000241913.1	+	processed_pseudogene	KNOWN	RP5-1073F15.1	1	1	0.479549
chr17	59940908	59973101	59957004	ENSG00000267318.1	+	protein_coding	KNOWN	RP11-178C3.1	1	4	0.124493
chr17	59952240	59964761	59958500	ENSG00000189050.14	-	protein_coding	KNOWN	RNFT1	10	9	-0.084039
chr17	59962363	60018975	59990669	ENSG00000267104.2	-	lincRNA	KNOWN	TBC1D3P1-DHX40P1	1	14	0.160645
chr17	59964832	59996972	59980902	ENSG00000267302.5	+	lincRNA	KNOWN	RP11-178C3.2	2	4	0.054192
chr17	59976009	60002384	59989196	ENSG00000266992.1	-	unprocessed_pseudogene	KNOWN	DHX40P1	1	11	0.118314
chr17	60008437	60017498	60012967	ENSG00000238283.3	-	unprocessed_pseudogene	KNOWN	TBC1D3P1	1	13	0.478038
chr17	60021072	60022436	60021754	ENSG00000275860.1	+	unprocessed_pseudogene	KNOWN	RP11-178C3.7	1	2	0.533261
chr17	60025859	60030746	60028302	ENSG00000274378.1	+	unprocessed_pseudogene	KNOWN	RP11-178C3.8	1	2	0.550678
chr17	60042361	60042442	60042401	ENSG00000263422.1	-	miRNA	NOVEL	AC005702.1	1	1	0.647207
chr17	60042546	60042627	60042586	ENSG00000266701.1	-	miRNA	NOVEL	AC005702.4	1	1	0.647207
chr17	60042694	60042772	60042733	ENSG00000265638.1	-	miRNA	NOVEL	AC005702.3	1	1	0.647207
chr17	60042805	60042882	60042843	ENSG00000263820.1	-	miRNA	NOVEL	AC005702.2	1	1	0.647207
chr17	60043025	60043105	60043065	ENSG00000264049.1	-	miRNA	KNOWN	MIR4737	1	1	0.647207
chr17	60043194	60078931	60061062	ENSG00000068097.14	-	protein_coding	KNOWN	HEATR6	12	20	0.458734
chr17	60063004	60064782	60063893	ENSG00000267526.1	-	processed_pseudogene	KNOWN	RP11-178C3.6	1	2	0.481319
chr17	60079309	60088695	60084002	ENSG00000267416.1	+	lincRNA	KNOWN	CTD-2319I12.2	1	2	0.264571
chr17	60083566	60091885	60087725	ENSG00000261040.6	-	processed_transcript	KNOWN	WFDC21P	8	5	0.334120
chr17	60101759	60102919	60102339	ENSG00000280852.2	-	transcribed_processed_pseudogene	KNOWN	CTD-2319I12.10	2	1	0.571344
chr17	60113793	60120687	60117240	ENSG00000267295.1	-	unprocessed_pseudogene	KNOWN	CTD-2319I12.3	1	3	0.158081
chr17	60124110	60125474	60124792	ENSG00000277532.1	-	unprocessed_pseudogene	KNOWN	CTD-2319I12.9	1	2	0.158081
chr17	60126535	60135644	60131089	ENSG00000267248.1	-	processed_transcript	KNOWN	CTD-2319I12.4	2	4	0.336279
chr17	60135762	60140081	60137921	ENSG00000267095.1	-	lincRNA	KNOWN	CTD-2319I12.5	1	2	0.445629
chr17	60149936	60170899	60160417	ENSG00000167434.9	+	protein_coding	KNOWN	CA4	6	8	0.831561
chr17	60173322	60173822	60173572	ENSG00000266960.1	+	unprocessed_pseudogene	KNOWN	FAM106DP	1	1	0.481319
chr17	60175423	60175669	60175546	ENSG00000281662.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.481319
chr17	60179094	60422470	60300782	ENSG00000170832.12	-	protein_coding	KNOWN	USP32	15	34	0.256635
chr17	60231516	60231646	60231581	ENSG00000252577.1	-	scaRNA	KNOWN	SCARNA20	1	1	0.266021
chr17	60245288	60245647	60245467	ENSG00000241157.1	-	processed_pseudogene	KNOWN	RP11-3K24.1	1	1	0.266021
chr17	60256720	60258411	60257565	ENSG00000275562.1	+	unprocessed_pseudogene	KNOWN	RP11-3K24.3	1	4	0.036649
chr17	60296500	60296638	60296569	ENSG00000280588.1	+	miRNA	NOVEL	AC104763.1	1	1	-0.054557
chr17	60315834	60316215	60316024	ENSG00000271626.1	+	processed_pseudogene	KNOWN	RP11-3K24.2	1	1	0.172774
chr17	60392429	60431421	60411925	ENSG00000141371.12	+	protein_coding	KNOWN	C17orf64	4	6	0.368193
chr17	60433678	60435996	60434837	ENSG00000213228.5	-	transcribed_processed_pseudogene	KNOWN	RPL12P38	2	1	0.526223
chr17	60443149	60526219	60484684	ENSG00000062725.9	-	protein_coding	KNOWN	APPBP2	6	13	0.323897
chr17	60513190	60513550	60513370	ENSG00000270553.1	+	processed_pseudogene	KNOWN	RP11-15E18.5	1	1	0.266243
chr17	60526293	60550798	60538545	ENSG00000259349.1	+	antisense	KNOWN	RP11-15E18.1	2	5	0.196564
chr17	60562010	60562161	60562085	ENSG00000267678.1	-	processed_pseudogene	KNOWN	RP11-15E18.3	1	1	0.071032
chr17	60564547	60586623	60575585	ENSG00000267772.1	+	lincRNA	KNOWN	RP11-15E18.4	1	4	0.289379
chr17	60564740	60565671	60565205	ENSG00000266943.1	-	processed_pseudogene	KNOWN	RPSAP66	1	2	0.071032
chr17	60600183	60666280	60633231	ENSG00000170836.11	+	protein_coding	KNOWN	PPM1D	4	7	0.451911
chr17	60659523	60660839	60660181	ENSG00000281267.1	-	protein_coding	KNOWN	AC110602.1	1	5	0.550531
chr17	60662333	60662437	60662385	ENSG00000200013.1	-	snRNA	KNOWN	RNU6-623P	1	1	0.550531
chr17	60677453	61392838	61035145	ENSG00000141376.20	+	protein_coding	KNOWN	BCAS3	35	26	0.089899
chr17	60696313	60696605	60696459	ENSG00000239932.3	+	misc_RNA	KNOWN	RN7SL606P	1	1	0.425118
chr17	60727165	60727482	60727323	ENSG00000224011.1	-	processed_pseudogene	KNOWN	AC111155.1	1	1	0.204018
chr17	60748940	60749046	60748993	ENSG00000252534.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.142473
chr17	60810165	60811462	60810813	ENSG00000267083.1	+	processed_pseudogene	KNOWN	KRT18P61	1	1	0.068013
chr17	60810957	60811052	60811004	ENSG00000211515.1	+	miRNA	NOVEL	AC079005.1	1	1	0.068013
chr17	60851382	60851745	60851563	ENSG00000254114.1	+	processed_pseudogene	KNOWN	HMGN1P28	1	1	0.091992
chr17	60899891	60900185	60900038	ENSG00000264322.2	+	misc_RNA	KNOWN	RN7SL448P	1	1	0.138685
chr17	61034636	61070122	61052379	ENSG00000267207.1	-	antisense	KNOWN	RP11-264B14.1	1	3	0.083594
chr17	61069856	61070356	61070106	ENSG00000267449.1	-	antisense	KNOWN	RP11-264B14.2	1	2	0.020172
chr17	61069871	61070341	61070106	ENSG00000227694.1	+	processed_pseudogene	KNOWN	RPL23AP74	1	1	0.015137
chr17	61130704	61135964	61133334	ENSG00000267667.1	-	antisense	KNOWN	RP11-136H19.1	1	2	0.277207
chr17	61354763	61355155	61354959	ENSG00000273982.1	-	antisense	KNOWN	RP11-332H18.7	1	1	0.427740
chr17	61361668	61400243	61380955	ENSG00000267131.1	-	antisense	KNOWN	RP11-332H18.5	1	4	0.573048
chr17	61382785	61384680	61383732	ENSG00000266934.1	+	sense_intronic	KNOWN	RP11-332H18.3	2	3	0.438723
chr17	61393456	61411555	61402505	ENSG00000267280.5	-	antisense	KNOWN	TBX2-AS1	6	3	0.946395
chr17	61399896	61409466	61404681	ENSG00000121068.13	+	protein_coding	KNOWN	TBX2	4	7	0.953472
chr17	61411751	61413280	61412515	ENSG00000187013.4	+	lincRNA	KNOWN	C17orf82	1	1	0.871150
chr17	61452404	61485110	61468757	ENSG00000121075.9	+	protein_coding	KNOWN	TBX4	7	9	0.536134
chr17	61460224	61463384	61461804	ENSG00000267137.1	-	antisense	KNOWN	RP11-15K2.2	1	2	0.426656
chr17	61485684	61485801	61485742	ENSG00000278751.1	-	miRNA	NOVEL	AC005901.1	1	1	0.663608
chr17	61590426	61591202	61590814	ENSG00000253506.2	-	protein_coding	KNOWN	NACA2	1	1	0.152655
chr17	61681266	61863521	61772393	ENSG00000136492.8	-	protein_coding	KNOWN	BRIP1	6	20	0.029337
chr17	61865367	61928016	61896691	ENSG00000108506.11	-	protein_coding	KNOWN	INTS2	7	25	0.203227
chr17	61874084	61874182	61874133	ENSG00000202361.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.116938
chr17	61942605	62065282	62003943	ENSG00000108510.9	-	protein_coding	KNOWN	MED13	6	30	0.160883
chr17	62003700	62007518	62005609	ENSG00000279133.1	-	TEC	KNOWN	RP11-342K2.1	1	1	-0.268410
chr17	62005737	62006016	62005876	ENSG00000242398.3	-	misc_RNA	KNOWN	RN7SL800P	1	1	-0.268410
chr17	62015857	62015937	62015897	ENSG00000221302.1	-	miRNA	NOVEL	AC018628.1	1	1	0.108866
chr17	62036833	62036945	62036889	ENSG00000200842.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.365985
chr17	62122320	62122421	62122370	ENSG00000207123.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.014409
chr17	62136972	62140639	62138805	ENSG00000266066.1	-	processed_pseudogene	KNOWN	POLRMTP1	1	1	0.458419
chr17	62231470	62247153	62239311	ENSG00000266365.1	-	unprocessed_pseudogene	KNOWN	RP11-51L5.3	1	9	0.083677
chr17	62260634	62261936	62261285	ENSG00000266647.1	+	unprocessed_pseudogene	KNOWN	RP11-51L5.4	1	2	0.314384
chr17	62264705	62275655	62270180	ENSG00000188755.9	-	transcribed_unprocessed_pseudogene	KNOWN	TBC1D3P2	3	14	0.332213
chr17	62272487	62282915	62277701	ENSG00000270033.1	-	protein_coding	KNOWN	RP11-51L5.7	1	4	0.348900
chr17	62282387	62297026	62289706	ENSG00000263887.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-51L5.5	2	11	0.058965
chr17	62319884	62320189	62320036	ENSG00000242123.1	+	processed_pseudogene	KNOWN	RP11-51L5.1	1	1	-0.123737
chr17	62370218	62416476	62393347	ENSG00000172421.7	+	protein_coding	KNOWN	EFCAB3	4	12	-0.088943
chr17	62381668	62382015	62381841	ENSG00000239809.1	+	processed_pseudogene	KNOWN	RP11-51L5.2	1	1	-0.163265
chr17	62383104	62383166	62383135	ENSG00000251981.1	+	snRNA	KNOWN	RNU7-52P	1	1	-0.163265
chr17	62397397	62398142	62397769	ENSG00000239527.1	+	processed_pseudogene	KNOWN	RPS23P7	1	2	-0.031640
chr17	62423867	62450822	62437344	ENSG00000087995.15	+	protein_coding	KNOWN	METTL2A	4	9	0.219928
chr17	62458658	62615481	62537069	ENSG00000146872.17	+	protein_coding	KNOWN	TLK2	18	23	0.430927
chr17	62516321	62516767	62516544	ENSG00000239246.3	-	processed_pseudogene	KNOWN	RP11-464D20.2	1	1	0.145859
chr17	62549726	62552121	62550923	ENSG00000264546.1	+	sense_intronic	KNOWN	RP11-464D20.6	1	2	0.568016
chr17	62626031	62626453	62626242	ENSG00000277463.1	+	lincRNA	KNOWN	CTD-3035K23.6	1	1	0.555741
chr17	62626437	62627590	62627013	ENSG00000274565.1	-	antisense	KNOWN	CTD-3035K23.7	1	1	0.555741
chr17	62627401	62693597	62660499	ENSG00000011028.13	+	protein_coding	KNOWN	MRC2	7	30	0.889061
chr17	62661621	62661725	62661673	ENSG00000207382.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.812214
chr17	62679403	62681354	62680378	ENSG00000279713.1	-	TEC	KNOWN	CTD-3035K23.3	1	1	0.891173
chr17	62683905	62684010	62683957	ENSG00000199697.1	+	snRNA	KNOWN	RNU6-446P	1	1	0.891173
chr17	62699244	62737922	62718583	ENSG00000265702.1	+	antisense	KNOWN	RP11-156L14.1	4	3	0.774585
chr17	62701314	62808344	62754829	ENSG00000173838.11	-	protein_coding	KNOWN	MARCH10	10	12	0.511311
chr17	62808500	62836371	62822435	ENSG00000265000.1	+	lincRNA	KNOWN	RP11-453A12.1	1	2	0.404192
chr17	62841101	62841645	62841373	ENSG00000264907.1	+	processed_pseudogene	KNOWN	PRELID3BP3	1	1	0.327620
chr17	62935402	62966810	62951106	ENSG00000263931.1	-	lincRNA	KNOWN	RP11-180P8.1	1	3	0.443061
chr17	62944215	62944312	62944263	ENSG00000207552.1	+	miRNA	KNOWN	MIR633	1	1	0.422140
chr17	62950831	62951188	62951009	ENSG00000265262.1	-	transcribed_processed_pseudogene	KNOWN	TRMT112P3	1	1	0.461226
chr17	62966817	62968549	62967683	ENSG00000266411.1	-	lincRNA	KNOWN	RP11-180P8.3	1	2	0.461226
chr17	62978494	62978841	62978667	ENSG00000270324.1	-	processed_pseudogene	KNOWN	RP11-180P8.4	1	1	0.146440
chr17	63004672	63005152	63004912	ENSG00000272164.1	-	processed_pseudogene	KNOWN	RP11-180P8.5	1	1	0.160887
chr17	63009556	63427699	63218627	ENSG00000170921.14	+	protein_coding	KNOWN	TANC2	11	26	0.223404
chr17	63088162	63089197	63088679	ENSG00000272383.1	-	processed_pseudogene	KNOWN	RP11-556O9.4	1	1	0.307969
chr17	63117019	63130947	63123983	ENSG00000264513.1	-	antisense	KNOWN	RP11-556O9.2	1	4	0.063312
chr17	63182166	63182817	63182491	ENSG00000264529.1	+	transcribed_processed_pseudogene	KNOWN	RP11-556O9.3	1	1	0.349324
chr17	63193930	63339053	63266491	ENSG00000233635.2	-	antisense	KNOWN	AC037445.1	2	4	0.183198
chr17	63281928	63282064	63281996	ENSG00000281576.1	+	miRNA	NOVEL	AC015923.2	1	1	0.237291
chr17	63305262	63313521	63309391	ENSG00000263501.1	-	antisense	KNOWN	RP11-269G24.2	1	2	0.134795
chr17	63331984	63332539	63332261	ENSG00000271919.1	-	transcribed_processed_pseudogene	KNOWN	RP11-269G24.8	1	1	0.141460
chr17	63362009	63362093	63362051	ENSG00000278282.1	-	miRNA	NOVEL	AC005828.1	1	1	0.526012
chr17	63381231	63414312	63397771	ENSG00000226797.1	-	antisense	KNOWN	AC015923.1	1	3	0.295621
chr17	63391191	63431089	63411140	ENSG00000263644.1	-	antisense	KNOWN	RP11-269G24.3	1	2	0.417951
chr17	63393355	63393586	63393470	ENSG00000271749.1	+	unprocessed_pseudogene	KNOWN	RP11-269G24.7	1	1	0.230890
chr17	63430468	63432211	63431339	ENSG00000265282.1	-	lincRNA	KNOWN	RP11-269G24.4	1	2	0.802933
chr17	63432304	63446378	63439341	ENSG00000008283.15	-	protein_coding	KNOWN	CYB561	21	6	0.802933
chr17	63454993	63455817	63455405	ENSG00000265971.1	+	lincRNA	KNOWN	RP11-269G24.6	1	2	0.931527
chr17	63471604	63472093	63471848	ENSG00000228979.4	+	processed_pseudogene	KNOWN	CTD-2501B8.5	1	1	0.590654
chr17	63477061	63498380	63487720	ENSG00000159640.15	+	protein_coding	KNOWN	ACE	22	25	0.688706
chr17	63484823	63521848	63503335	ENSG00000264813.6	+	protein_coding	KNOWN	CTD-2501B8.1	1	31	0.725430
chr17	63507056	63519806	63513431	ENSG00000224353.2	+	transcribed_unprocessed_pseudogene	KNOWN	ACE3P	1	13	0.648337
chr17	63523334	63548977	63536155	ENSG00000173826.14	+	protein_coding	KNOWN	KCNH6	6	15	0.764770
chr17	63550461	63594266	63572363	ENSG00000136485.14	+	protein_coding	KNOWN	DCAF7	6	8	0.674921
chr17	63573242	63573345	63573293	ENSG00000200560.1	-	snRNA	KNOWN	RNU6-288P	1	1	0.619403
chr17	63600872	63608365	63604618	ENSG00000136463.7	+	protein_coding	KNOWN	TACO1	2	5	0.518617
chr17	63610772	63611184	63610978	ENSG00000270587.1	-	processed_pseudogene	KNOWN	RP11-51F16.9	1	1	0.676954
chr17	63622415	63696303	63659359	ENSG00000198909.7	+	protein_coding	KNOWN	MAP3K3	11	18	0.568918
chr17	63636601	63637113	63636857	ENSG00000263883.1	+	transcribed_processed_pseudogene	KNOWN	EEF1DP7	1	1	0.619781
chr17	63695902	63701172	63698537	ENSG00000136490.8	-	protein_coding	KNOWN	LIMD2	12	6	0.786647
chr17	63700847	63702670	63701758	ENSG00000279369.1	+	TEC	KNOWN	RP11-51F16.1	1	1	0.786647
chr17	63702832	63741970	63722401	ENSG00000266173.5	-	protein_coding	KNOWN	STRADA	24	13	0.665273
chr17	63702845	63752097	63727471	ENSG00000125695.12	-	protein_coding	KNOWN	RP11-51F16.8	1	12	0.604477
chr17	63745250	63776351	63760800	ENSG00000108588.13	-	protein_coding	KNOWN	CCDC47	7	14	0.333374
chr17	63773603	63819317	63796460	ENSG00000198231.12	+	protein_coding	KNOWN	DDX42	19	19	0.545192
chr17	63819433	63830012	63824722	ENSG00000108592.16	-	protein_coding	KNOWN	FTSJ3	16	21	0.699183
chr17	63827152	63832026	63829589	ENSG00000087191.12	+	protein_coding	KNOWN	PSMC5	21	13	0.831714
chr17	63832081	63843065	63837573	ENSG00000108604.15	-	protein_coding	KNOWN	SMARCD2	12	14	1.018411
chr17	63849292	63864379	63856835	ENSG00000240280.6	+	unitary_pseudogene	KNOWN	TCAM1P	7	7	1.098126
chr17	63872012	63881863	63876937	ENSG00000213218.9	-	protein_coding	KNOWN	CSH2	8	5	0.651419
chr17	63880215	63881935	63881075	ENSG00000136487.17	-	protein_coding	KNOWN	GH2	5	5	0.651419
chr17	63885851	63886051	63885951	ENSG00000259533.1	+	unprocessed_pseudogene	KNOWN	RP11-630H24.3	1	1	0.651419
chr17	63894909	63896661	63895785	ENSG00000136488.14	-	protein_coding	KNOWN	CSH1	6	5	0.533309
chr17	63900643	63900879	63900761	ENSG00000259333.1	+	unprocessed_pseudogene	KNOWN	RP11-630H24.4	1	1	0.533309
chr17	63909597	63918838	63914217	ENSG00000204414.11	-	protein_coding	KNOWN	CSHL1	11	5	0.977033
chr17	63917200	63918838	63918019	ENSG00000259384.6	-	protein_coding	KNOWN	GH1	6	5	0.997214
chr17	63928740	63932354	63930547	ENSG00000007312.12	-	protein_coding	KNOWN	CD79B	6	6	0.739515
chr17	63938554	63972918	63955736	ENSG00000007314.11	-	protein_coding	KNOWN	SCN4A	4	24	0.853573
chr17	63972920	63989422	63981171	ENSG00000263489.1	-	lincRNA	KNOWN	CTC-264K15.6	1	3	0.808566
chr17	63996071	63999899	63997985	ENSG00000264954.1	-	lincRNA	KNOWN	PRR29-AS1	2	3	0.828957
chr17	63998351	64004304	64001327	ENSG00000224383.7	+	protein_coding	KNOWN	PRR29	10	6	0.828957
chr17	64002594	64020634	64011614	ENSG00000108622.10	-	protein_coding	KNOWN	ICAM2	16	6	0.704629
chr17	64039142	64130819	64084980	ENSG00000178607.15	-	protein_coding	KNOWN	ERN1	8	22	0.497376
chr17	64145970	64146476	64146223	ENSG00000266402.3	+	lincRNA	KNOWN	SNHG25	2	2	0.723124
chr17	64146083	64146152	64146117	ENSG00000199753.1	+	snoRNA	KNOWN	SNORD104	1	1	0.723124
chr17	64146337	64146471	64146404	ENSG00000281311.1	+	snoRNA	NOVEL	SNORA50	1	1	0.723124
chr17	64146339	64146471	64146405	ENSG00000277887.1	+	snoRNA	KNOWN	SNORA76C	1	1	0.723124
chr17	64147227	64263301	64205264	ENSG00000136478.7	-	protein_coding	KNOWN	TEX2	10	14	0.538949
chr17	64308316	64308690	64308503	ENSG00000256358.1	-	processed_pseudogene	KNOWN	RPL31P57	1	1	0.400677
chr17	64319415	64413776	64366595	ENSG00000261371.5	-	protein_coding	KNOWN	PECAM1	9	16	0.514641
chr17	64390158	64390263	64390210	ENSG00000239823.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.507029
chr17	64425069	64425170	64425119	ENSG00000265031.1	-	miRNA	KNOWN	MIR1273E	1	1	0.177299
chr17	64449037	64468643	64458840	ENSG00000271605.5	+	protein_coding	KNOWN	MILR1	7	10	0.442147
chr17	64462550	64462647	64462598	ENSG00000266804.1	-	miRNA	NOVEL	AC234063.1	1	1	0.442639
chr17	64477785	64497036	64487410	ENSG00000256525.6	-	protein_coding	KNOWN	POLG2	10	8	0.379506
chr17	64491523	64491789	64491656	ENSG00000256826.1	+	processed_pseudogene	KNOWN	AC138744.2	1	1	0.343176
chr17	64499616	64508199	64503907	ENSG00000108654.11	-	protein_coding	KNOWN	DDX5	35	13	0.343176
chr17	64500773	64500839	64500806	ENSG00000265695.1	-	miRNA	KNOWN	MIR3064	1	1	0.343176
chr17	64501214	64501313	64501263	ENSG00000266241.1	-	miRNA	KNOWN	MIR5047	1	1	0.343176
chr17	64506588	64542461	64524524	ENSG00000258890.6	+	protein_coding	KNOWN	CEP95	19	21	0.409370
chr17	64542295	64662068	64602181	ENSG00000108854.15	-	protein_coding	KNOWN	SMURF2	7	19	0.397281
chr17	64572829	64573081	64572955	ENSG00000271779.1	+	processed_pseudogene	KNOWN	RP11-87N3.6	1	1	0.304986
chr17	64662278	64662378	64662328	ENSG00000274483.1	-	miRNA	NOVEL	AC132812.1	1	1	0.560469
chr17	64747264	64747492	64747378	ENSG00000270714.1	-	processed_pseudogene	KNOWN	MINOS1P2	1	1	0.519853
chr17	64749663	64781707	64765685	ENSG00000215769.8	-	processed_transcript	KNOWN	RP13-104F24.2	2	12	0.537534
chr17	64749918	64758603	64754260	ENSG00000266820.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP13-104F24.1	1	6	0.401551
chr17	64750420	64751311	64750865	ENSG00000265298.1	+	unprocessed_pseudogene	KNOWN	RP13-104F24.3	1	1	0.400437
chr17	64761912	64762710	64762311	ENSG00000263647.1	-	unprocessed_pseudogene	KNOWN	RP11-927P21.5	1	2	0.400437
chr17	64778842	64778937	64778889	ENSG00000265982.1	-	unprocessed_pseudogene	KNOWN	RP11-927P21.4	1	1	0.772235
chr17	64779259	64837154	64808206	ENSG00000214176.9	-	transcribed_unprocessed_pseudogene	KNOWN	PLEKHM1P	6	18	0.864471
chr17	64780759	64780824	64780791	ENSG00000278581.1	+	miRNA	KNOWN	MIR6080	1	1	0.772235
chr17	64825765	64825819	64825792	ENSG00000252242.1	-	snRNA	KNOWN	RNU7-115P	1	1	0.854663
chr17	64847386	64847728	64847557	ENSG00000272400.1	+	unprocessed_pseudogene	KNOWN	RP11-927P21.7	1	1	0.717143
chr17	64854312	64919480	64886896	ENSG00000176809.10	-	protein_coding	KNOWN	LRRC37A3	12	14	0.308629
chr17	64871504	64871784	64871644	ENSG00000264840.1	-	misc_RNA	KNOWN	RN7SL404P	1	1	0.200633
chr17	64881091	64881181	64881136	ENSG00000272134.1	+	processed_pseudogene	KNOWN	RP11-927P21.8	1	1	0.200633
chr17	64892728	64892845	64892786	ENSG00000272220.1	+	transcribed_processed_pseudogene	KNOWN	RP11-927P21.9	1	1	0.137554
chr17	64892729	64910180	64901454	ENSG00000265218.1	+	antisense	KNOWN	RP11-927P21.1	3	2	0.137976
chr17	64899766	64900716	64900241	ENSG00000266644.1	+	antisense	KNOWN	RP11-927P21.2	1	2	0.137554
chr17	64905883	64906018	64905950	ENSG00000271974.1	-	transcribed_processed_pseudogene	KNOWN	RP11-927P21.12	1	1	0.137554
chr17	64927634	64934203	64930918	ENSG00000264057.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-583F2.1	3	4	0.466107
chr17	64936485	64940229	64938357	ENSG00000266155.2	-	unprocessed_pseudogene	KNOWN	RP11-927P21.6	1	2	0.628045
chr17	64940602	64954177	64947389	ENSG00000280299.1	+	processed_transcript	KNOWN	RP11-583F2.7	1	2	0.377646
chr17	64940606	64940717	64940661	ENSG00000272346.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-927P21.11	1	1	0.628045
chr17	64943262	64951054	64947158	ENSG00000265912.1	+	lincRNA	KNOWN	RP11-583F2.2	1	2	0.517889
chr17	64951498	64951609	64951553	ENSG00000272006.1	-	processed_pseudogene	KNOWN	RP11-583F2.6	1	1	-0.185542
chr17	64953683	64956546	64955114	ENSG00000232457.4	+	transcribed_unprocessed_pseudogene	KNOWN	SLC16A6P1	1	2	-0.185542
chr17	64966550	64975576	64971063	ENSG00000214174.8	-	transcribed_unprocessed_pseudogene	KNOWN	AMZ2P1	3	5	0.063504
chr17	65010715	65056839	65033777	ENSG00000120063.9	-	protein_coding	KNOWN	GNA13	2	4	0.105460
chr17	65051909	65053308	65052608	ENSG00000266598.1	+	antisense	KNOWN	RP11-583F2.5	1	2	0.356587
chr17	65100812	65111058	65105935	ENSG00000263470.1	+	lincRNA	KNOWN	RP11-160O5.1	1	3	0.285214
chr17	65137431	65227703	65182567	ENSG00000108370.15	+	protein_coding	KNOWN	RGS9	8	19	0.418390
chr17	65185319	65185482	65185400	ENSG00000265883.1	-	processed_pseudogene	KNOWN	RP11-169I9.2	1	1	0.544199
chr17	65457541	65458408	65457974	ENSG00000263520.1	+	lincRNA	KNOWN	CRAT40	1	3	-0.082404
chr17	65528563	65561647	65545105	ENSG00000168646.12	-	protein_coding	KNOWN	AXIN2	9	11	0.201260
chr17	65538102	65641033	65589567	ENSG00000266076.1	-	protein_coding	KNOWN	CTD-2535L24.2	1	7	0.228111
chr17	65635538	66192084	65913811	ENSG00000154240.16	-	protein_coding	KNOWN	CEP112	20	27	-0.220387
chr17	65644308	65644617	65644462	ENSG00000271587.1	+	processed_pseudogene	KNOWN	GS1-531I17.3	1	1	0.142916
chr17	65654914	65655395	65655154	ENSG00000270870.1	+	processed_pseudogene	KNOWN	GS1-531I17.2	1	1	0.139820
chr17	66197693	66198238	66197965	ENSG00000266707.1	+	processed_pseudogene	KNOWN	PSMD7P1	1	1	-0.110052
chr17	66212033	66256525	66234279	ENSG00000091583.10	-	protein_coding	KNOWN	APOH	4	8	0.082774
chr17	66267743	66267848	66267795	ENSG00000252653.1	+	rRNA	KNOWN	RNA5SP444	1	1	0.182757
chr17	66302636	66810743	66556689	ENSG00000154229.11	+	protein_coding	KNOWN	PRKCA	5	17	0.249644
chr17	66364029	66364320	66364174	ENSG00000244044.3	+	misc_RNA	KNOWN	RN7SL735P	1	1	0.393161
chr17	66398069	66416854	66407461	ENSG00000264630.5	-	antisense	KNOWN	PRKCA-AS1	3	3	0.229239
chr17	66638271	66638374	66638322	ENSG00000252685.1	+	snRNA	KNOWN	RNU6-928P	1	1	0.159807
chr17	66639269	66639383	66639326	ENSG00000251698.1	+	rRNA	KNOWN	RNA5SP445	1	1	0.159807
chr17	66676372	66677404	66676888	ENSG00000229330.2	+	sense_intronic	KNOWN	AC006947.1	1	3	0.091992
chr17	66787072	66787168	66787120	ENSG00000207943.1	+	miRNA	KNOWN	MIR634	1	1	0.159807
chr17	66835117	66885486	66860301	ENSG00000075429.8	+	protein_coding	KNOWN	CACNG5	2	6	0.177451
chr17	66895491	66895572	66895531	ENSG00000251764.1	+	rRNA	KNOWN	RNA5SP446	1	1	0.326856
chr17	66964910	67033398	66999154	ENSG00000075461.5	+	protein_coding	KNOWN	CACNG4	1	4	0.342076
chr17	67019934	67021743	67020838	ENSG00000264491.1	-	antisense	KNOWN	RP11-349A8.3	1	2	0.172535
chr17	67032409	67033290	67032849	ENSG00000265664.1	-	antisense	KNOWN	RP11-74H8.1	1	2	0.389152
chr17	67044590	67056797	67050693	ENSG00000108878.4	+	protein_coding	KNOWN	CACNG1	1	4	0.446723
chr17	67070438	67245989	67158213	ENSG00000198265.11	-	protein_coding	KNOWN	HELZ	12	33	0.099487
chr17	67224303	67225541	67224922	ENSG00000264421.1	+	antisense	KNOWN	RP11-401F2.4	1	2	0.381498
chr17	67224728	67225041	67224884	ENSG00000213180.4	+	processed_pseudogene	KNOWN	RPL36AP48	1	1	0.381498
chr17	67244837	67245806	67245321	ENSG00000266473.1	+	antisense	KNOWN	RP11-401F2.3	1	2	0.474712
chr17	67268110	67268228	67268169	ENSG00000200619.1	+	rRNA	KNOWN	RNA5SP447	1	1	0.118144
chr17	67271469	67271607	67271538	ENSG00000207410.1	+	snoRNA	NOVEL	SNORA8	1	1	0.462707
chr17	67276118	67276351	67276234	ENSG00000264093.1	-	processed_pseudogene	KNOWN	RP11-401F2.2	1	1	0.462707
chr17	67337916	67366627	67352271	ENSG00000197170.9	-	protein_coding	KNOWN	PSMD12	8	13	0.359138
chr17	67377281	67697261	67537271	ENSG00000154217.14	+	protein_coding	KNOWN	PITPNC1	7	10	0.278177
chr17	67408774	67408881	67408827	ENSG00000201547.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.268242
chr17	67457023	67457290	67457156	ENSG00000244610.3	-	misc_RNA	KNOWN	RN7SL756P	1	1	0.269910
chr17	67471489	67471585	67471537	ENSG00000207688.2	+	miRNA	KNOWN	MIR548AA2	1	1	0.309223
chr17	67524481	67525422	67524951	ENSG00000264754.1	+	sense_intronic	KNOWN	CTD-2653B5.1	1	2	0.245615
chr17	67611277	67613822	67612549	ENSG00000279917.1	+	TEC	KNOWN	RP11-360N9.2	1	1	-0.116250
chr17	67637774	67638973	67638373	ENSG00000279361.1	+	TEC	KNOWN	RP11-360N9.3	1	1	0.479549
chr17	67717833	67744531	67731182	ENSG00000130935.9	+	protein_coding	KNOWN	NOL11	11	18	0.184011
chr17	67720543	67720618	67720580	ENSG00000277123.1	+	miRNA	NOVEL	AC006534.3	1	1	0.107178
chr17	67740669	67740799	67740734	ENSG00000200394.1	+	snoRNA	KNOWN	SNORA38B	1	1	0.248334
chr17	67774591	67777324	67775957	ENSG00000266858.1	-	unprocessed_pseudogene	KNOWN	RPSAP67	1	4	0.519163
chr17	67784753	67785293	67785023	ENSG00000213179.4	+	processed_pseudogene	KNOWN	RPL17P41	1	1	0.519163
chr17	67813582	67813654	67813618	ENSG00000222548.2	+	miRNA	NOVEL	AC006534.1	1	1	0.166846
chr17	67825524	67984378	67904951	ENSG00000171634.16	+	protein_coding	KNOWN	BPTF	18	30	0.209406
chr17	67843945	67844014	67843979	ENSG00000265086.1	+	miRNA	NOVEL	AC006534.2	1	1	0.243110
chr17	67950885	67951746	67951315	ENSG00000266717.1	-	antisense	KNOWN	RP11-855A2.3	1	2	0.370592
chr17	67955314	67957291	67956302	ENSG00000279573.1	+	TEC	KNOWN	RP11-855A2.1	1	1	0.370592
chr17	67973934	67976072	67975003	ENSG00000279880.1	+	TEC	KNOWN	RP11-855A2.2	1	1	0.425416
chr17	67977698	67977972	67977835	ENSG00000265052.2	+	misc_RNA	KNOWN	RN7SL622P	1	1	0.425416
chr17	67991101	67993649	67992375	ENSG00000186665.8	-	protein_coding	KNOWN	C17orf58	3	3	0.777356
chr17	67993880	67996431	67995155	ENSG00000266176.1	-	lincRNA	KNOWN	RP11-855A2.5	1	2	0.777356
chr17	68035519	68046842	68041180	ENSG00000182481.8	+	protein_coding	KNOWN	KPNA2	7	11	0.451662
chr17	68095068	68095757	68095412	ENSG00000266117.1	+	processed_pseudogene	KNOWN	FBXO36P1	1	2	0.646960
chr17	68096046	68101474	68098760	ENSG00000265055.1	-	lincRNA	KNOWN	AC145343.2	2	3	0.646960
chr17	68101538	68101639	68101588	ENSG00000278219.1	+	miRNA	NOVEL	AC145343.1	1	1	0.646960
chr17	68101908	68115518	68108713	ENSG00000237854.3	+	transcribed_unprocessed_pseudogene	KNOWN	LINC00674	2	3	0.365558
chr17	68125777	68152468	68139122	ENSG00000267023.5	-	transcribed_unprocessed_pseudogene	KNOWN	LRRC37A16P	3	15	0.156571
chr17	68126666	68129586	68128126	ENSG00000278730.1	+	lincRNA	KNOWN	RP11-147L13.11	1	1	-0.046985
chr17	68131462	68131907	68131684	ENSG00000274561.1	+	lincRNA	KNOWN	RP11-147L13.12	1	1	0.202739
chr17	68133201	68135935	68134568	ENSG00000277476.1	+	lincRNA	KNOWN	RP11-147L13.13	1	1	0.202739
chr17	68134675	68135604	68135139	ENSG00000267352.1	-	processed_pseudogene	KNOWN	SH3GL1P3	1	1	0.202739
chr17	68152776	68159043	68155909	ENSG00000267708.1	-	unprocessed_pseudogene	KNOWN	RP11-147L13.7	1	6	0.130672
chr17	68188547	68189165	68188856	ENSG00000278740.1	+	lincRNA	KNOWN	RP11-147L13.14	1	1	0.393373
chr17	68189884	68192802	68191343	ENSG00000267731.1	+	lincRNA	KNOWN	RP11-147L13.8	1	1	0.528948
chr17	68198921	68199596	68199258	ENSG00000267472.1	+	processed_pseudogene	KNOWN	LOC440461	1	1	0.534510
chr17	68205489	68207493	68206491	ENSG00000274712.1	+	lincRNA	KNOWN	RP11-147L13.15	1	1	0.534510
chr17	68246629	68247938	68247283	ENSG00000265100.1	-	antisense	KNOWN	RP11-147L13.2	1	1	0.448685
chr17	68247574	68257164	68252369	ENSG00000196704.11	+	protein_coding	KNOWN	AMZ2	19	8	0.206687
chr17	68259182	68422731	68340956	ENSG00000141337.12	+	protein_coding	KNOWN	ARSG	9	12	0.313439
chr17	68267026	68291267	68279146	ENSG00000108932.11	-	protein_coding	KNOWN	SLC16A6	5	7	0.181297
chr17	68413623	68524949	68469286	ENSG00000267009.6	+	processed_transcript	KNOWN	RP11-120M18.2	4	6	0.343146
chr17	68420948	68457513	68439230	ENSG00000070540.12	-	protein_coding	KNOWN	WIPI1	11	13	0.470069
chr17	68424451	68424548	68424499	ENSG00000207561.1	-	miRNA	KNOWN	MIR635	1	1	0.164748
chr17	68511780	68551319	68531549	ENSG00000108946.14	+	protein_coding	KNOWN	PRKAR1A	21	12	0.052632
chr17	68535113	68601389	68568251	ENSG00000108950.11	-	protein_coding	KNOWN	FAM20A	7	12	0.135554
chr17	68557516	68582577	68570046	ENSG00000267461.1	+	lincRNA	KNOWN	RP11-120M18.5	1	3	0.203461
chr17	68591796	68763882	68677839	ENSG00000267659.5	+	lincRNA	KNOWN	LINC01482	4	5	0.096125
chr17	68766473	68766559	68766516	ENSG00000263690.1	-	miRNA	NOVEL	AC011591.1	1	1	-0.162822
chr17	68793549	68797822	68795685	ENSG00000267250.1	-	lincRNA	KNOWN	RP11-118B18.2	1	2	0.054517
chr17	68867292	68955392	68911342	ENSG00000141338.13	-	protein_coding	KNOWN	ABCA8	15	40	-0.295457
chr17	68944531	69042784	68993657	ENSG00000231749.3	+	antisense	KNOWN	ABCA9-AS1	7	8	-0.302055
chr17	68974488	69061064	69017776	ENSG00000154258.16	-	protein_coding	KNOWN	ABCA9	8	39	-0.268006
chr17	69078702	69141888	69110295	ENSG00000154262.12	-	protein_coding	KNOWN	ABCA6	7	39	-0.363257
chr17	69094289	69095499	69094894	ENSG00000267361.1	-	processed_pseudogene	KNOWN	LOC100421166	1	1	-0.449381
chr17	69099542	69099656	69099599	ENSG00000265331.1	+	miRNA	KNOWN	MIR4524B	1	1	-0.449381
chr17	69147214	69244846	69196030	ENSG00000154263.17	-	protein_coding	KNOWN	ABCA10	12	41	-0.320852
chr17	69232963	69235012	69233987	ENSG00000278873.1	-	TEC	KNOWN	PRO1804	1	1	-0.196439
chr17	69244311	69327244	69285777	ENSG00000154265.15	-	protein_coding	KNOWN	ABCA5	14	39	-0.390340
chr17	69318733	69318961	69318847	ENSG00000267203.1	+	processed_pseudogene	KNOWN	SNRPGP4	1	1	-0.243192
chr17	69355133	69355218	69355175	ENSG00000252352.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.215676
chr17	69414698	69543331	69479014	ENSG00000108984.13	+	protein_coding	KNOWN	MAP2K6	9	12	-0.049711
chr17	69433084	69435533	69434308	ENSG00000278972.1	+	TEC	KNOWN	CTD-3022L24.1	1	1	0.083724
chr17	69477139	69501755	69489447	ENSG00000267653.1	-	lincRNA	KNOWN	RP1-193H18.3	1	3	-0.045847
chr17	69551358	69553861	69552609	ENSG00000267194.1	+	lincRNA	KNOWN	RP1-193H18.2	1	1	0.109914
chr17	69577251	69903000	69740125	ENSG00000227517.6	+	lincRNA	KNOWN	LINC01483	5	6	-0.014662
chr17	69707193	69707373	69707283	ENSG00000267184.1	-	processed_pseudogene	KNOWN	RP1-200G19.1	1	1	-0.252920
chr17	69948861	69948947	69948904	ENSG00000252100.2	-	miRNA	NOVEL	AC002539.2	1	1	-0.167875
chr17	69961707	69983538	69972622	ENSG00000237560.5	+	lincRNA	KNOWN	LINC01497	2	5	-0.258857
chr17	69985986	69986094	69986040	ENSG00000199801.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.253144
chr17	70017324	70128859	70073091	ENSG00000230258.6	-	antisense	KNOWN	AC002539.1	2	7	-0.197175
chr17	70051277	70068095	70059686	ENSG00000267603.1	+	lincRNA	KNOWN	LINC01028	2	3	-0.186868
chr17	70053429	70135608	70094518	ENSG00000153822.13	+	protein_coding	KNOWN	KCNJ16	11	6	-0.223359
chr17	70166961	70169402	70168181	ENSG00000267365.1	-	antisense	KNOWN	KCNJ2-AS1	1	1	-0.215437
chr17	70168673	70180048	70174360	ENSG00000123700.4	+	protein_coding	KNOWN	KCNJ2	2	2	-0.010502
chr17	70241324	70241761	70241542	ENSG00000267170.1	+	processed_pseudogene	KNOWN	CALM2P1	1	1	-0.584601
chr17	70312831	70368916	70340873	ENSG00000267109.1	-	lincRNA	KNOWN	CTD-2378E21.1	1	3	-0.414257
chr17	70628917	70629265	70629091	ENSG00000267471.1	-	processed_pseudogene	KNOWN	RP11-1058G23.1	1	1	-0.421348
chr17	70778604	70779230	70778917	ENSG00000271239.1	-	lincRNA	KNOWN	RP11-238F2.1	1	1	-0.350952
chr17	71011997	71013587	71012792	ENSG00000271101.1	+	processed_pseudogene	KNOWN	RP11-1003J3.1	1	2	-0.096865
chr17	71097775	71202177	71149976	ENSG00000260785.1	-	lincRNA	KNOWN	CASC17	1	4	-0.272012
chr17	71298156	71298218	71298187	ENSG00000238759.1	-	snRNA	KNOWN	RNU7-155P	1	1	-0.219367
chr17	71596338	71597279	71596808	ENSG00000225818.1	+	lincRNA	KNOWN	AC118653.2	2	2	-0.440356
chr17	71620978	71621436	71621207	ENSG00000228118.3	+	processed_pseudogene	KNOWN	MYL6P5	1	1	-0.634990
chr17	72021851	72034092	72027971	ENSG00000228639.6	-	lincRNA	KNOWN	AC005152.3	2	3	-0.243726
chr17	72030291	72041297	72035794	ENSG00000256124.5	+	lincRNA	KNOWN	LINC01152	3	3	-0.394939
chr17	72034107	72237203	72135655	ENSG00000234899.9	-	processed_transcript	KNOWN	SOX9-AS1	19	7	-0.056741
chr17	72072333	72093481	72082907	ENSG00000226101.1	+	lincRNA	KNOWN	AC007461.2	1	6	-0.147644
chr17	72121020	72126420	72123720	ENSG00000125398.5	+	protein_coding	KNOWN	SOX9	1	3	0.161254
chr17	72323123	72640472	72481797	ENSG00000227036.6	-	lincRNA	KNOWN	LINC00511	17	5	0.336161
chr17	72342940	72355136	72349038	ENSG00000264026.1	+	lincRNA	KNOWN	RP11-1124B17.1	1	4	0.322110
chr17	72425939	72428852	72427395	ENSG00000263680.2	+	lincRNA	KNOWN	RP11-57A1.1	1	2	0.384928
chr17	72627231	72627624	72627427	ENSG00000243514.2	+	processed_pseudogene	KNOWN	RPL32P33	1	1	0.364451
chr17	72642731	72644490	72643610	ENSG00000263893.2	+	lincRNA	KNOWN	CTD-3010D24.3	1	2	0.539451
chr17	72645949	73092712	72869330	ENSG00000133195.11	-	protein_coding	KNOWN	SLC39A11	17	10	0.384005
chr17	72663823	72664152	72663987	ENSG00000200783.1	-	misc_RNA	KNOWN	RN7SKP180	1	1	0.423401
chr17	72714383	72714471	72714427	ENSG00000222545.1	-	miRNA	NOVEL	AC080037.1	1	1	0.549981
chr17	72818836	72818972	72818904	ENSG00000252274.1	-	scaRNA	NOVEL	SCARNA24	1	1	0.386826
chr17	72839039	72839718	72839378	ENSG00000264196.1	+	antisense	KNOWN	RP11-171G2.1	1	2	0.141868
chr17	73067870	73068288	73068079	ENSG00000266501.1	-	processed_pseudogene	KNOWN	RP11-766H1.1	1	1	0.441141
chr17	73163035	73163359	73163197	ENSG00000265469.1	-	processed_pseudogene	KNOWN	POLR3KP2	1	1	0.270329
chr17	73164977	73196593	73180785	ENSG00000264860.1	+	processed_transcript	KNOWN	RP11-143K11.5	1	3	0.349188
chr17	73165012	73176633	73170822	ENSG00000180616.8	+	protein_coding	KNOWN	SSTR2	2	3	0.307161
chr17	73192632	73208507	73200569	ENSG00000166685.11	+	protein_coding	KNOWN	COG1	10	16	0.452739
chr17	73202968	73203431	73203199	ENSG00000277728.1	-	antisense	KNOWN	RP11-143K11.7	1	1	0.452739
chr17	73207353	73236753	73222053	ENSG00000133193.12	-	protein_coding	KNOWN	FAM104A	7	4	0.598478
chr17	73232233	73248947	73240590	ENSG00000141219.15	+	protein_coding	KNOWN	C17orf80	9	6	0.599992
chr17	73243093	73244706	73243899	ENSG00000265010.1	+	sense_intronic	KNOWN	RP11-661C3.2	1	2	0.599992
chr17	73248449	73262352	73255400	ENSG00000187959.9	-	protein_coding	KNOWN	CPSF4L	2	7	0.353458
chr17	73283624	73312175	73297899	ENSG00000179604.9	-	protein_coding	KNOWN	CDC42EP4	9	3	0.696494
chr17	73334384	73644089	73489236	ENSG00000069188.16	-	protein_coding	KNOWN	SDK2	5	45	0.362984
chr17	73513685	73518770	73516227	ENSG00000264985.1	+	antisense	KNOWN	RP11-449L23.2	1	2	0.290321
chr17	73519846	73521407	73520626	ENSG00000265780.1	+	antisense	KNOWN	RP11-449L23.3	1	1	0.290321
chr17	73641026	73643106	73642066	ENSG00000264750.1	+	antisense	KNOWN	RP11-277J6.2	1	2	0.349324
chr17	73662568	73663848	73663208	ENSG00000265935.1	-	lincRNA	KNOWN	RP11-277J6.3	1	2	0.254097
chr17	73737854	73756557	73747205	ENSG00000263574.1	+	lincRNA	KNOWN	CTD-2532D12.4	1	6	0.255003
chr17	73750330	73828520	73789425	ENSG00000177338.13	-	lincRNA	KNOWN	LINC00469	3	4	0.164713
chr17	73786802	73800793	73793797	ENSG00000234721.2	+	lincRNA	KNOWN	AC125421.1	2	7	0.218846
chr17	73831572	73836019	73833795	ENSG00000265927.1	-	lincRNA	KNOWN	CTD-2532D12.5	2	3	0.171559
chr17	73894749	73911878	73903313	ENSG00000266765.1	-	lincRNA	KNOWN	CTD-2582D11.1	1	2	0.110317
chr17	74043452	74154212	74098832	ENSG00000266357.5	-	lincRNA	KNOWN	RP11-101O21.1	2	5	0.162526
chr17	74203582	74210655	74207118	ENSG00000172809.12	+	protein_coding	KNOWN	RPL38	8	5	0.516347
chr17	74209980	74213342	74211661	ENSG00000246731.2	-	antisense	KNOWN	MGC16275	3	2	0.568869
chr17	74213514	74262020	74237767	ENSG00000141540.10	+	protein_coding	KNOWN	TTYH2	9	14	0.350774
chr17	74256896	74262020	74259458	ENSG00000264272.1	-	antisense	KNOWN	CTD-2514K5.4	1	2	0.384301
chr17	74274247	74314884	74294565	ENSG00000171595.13	+	protein_coding	KNOWN	DNAI2	6	14	0.331024
chr17	74307210	74309790	74308500	ENSG00000266106.1	-	antisense	KNOWN	RP11-647F2.2	1	2	0.408019
chr17	74326210	74355820	74341015	ENSG00000196169.14	+	protein_coding	KNOWN	KIF19	6	20	0.553810
chr17	74356416	74361946	74359181	ENSG00000204347.3	-	protein_coding	KNOWN	BTBD17	1	3	0.761843
chr17	74367407	74372622	74370014	ENSG00000257008.6	+	protein_coding	KNOWN	GPR142	3	4	0.530972
chr17	74417594	74417704	74417649	ENSG00000200021.1	-	rRNA	KNOWN	RNA5SP448	1	1	0.248961
chr17	74424851	74451653	74438252	ENSG00000170412.16	+	protein_coding	KNOWN	GPRC5C	11	5	0.224694
chr17	74466416	74484796	74475606	ENSG00000167851.13	+	protein_coding	KNOWN	CD300A	6	8	0.511984
chr17	74521174	74531474	74526324	ENSG00000178789.8	-	protein_coding	KNOWN	CD300LB	2	4	-0.039476
chr17	74541108	74546143	74543625	ENSG00000167850.3	-	protein_coding	KNOWN	CD300C	1	4	0.011618
chr17	74549399	74552737	74551068	ENSG00000236770.1	-	unprocessed_pseudogene	KNOWN	AC079325.5	1	4	0.245470
chr17	74560716	74567343	74564029	ENSG00000231027.1	-	unprocessed_pseudogene	KNOWN	AC079325.6	1	4	0.296716
chr17	74579365	74592283	74585824	ENSG00000204345.1	-	protein_coding	KNOWN	CD300LD	1	4	0.233761
chr17	74584679	74594209	74589444	ENSG00000182352.8	+	antisense	KNOWN	C17orf77	3	3	0.162750
chr17	74599840	74607229	74603534	ENSG00000261222.2	+	lincRNA	KNOWN	CTD-2006K23.1	3	2	0.013136
chr17	74609887	74623738	74616812	ENSG00000186407.6	-	protein_coding	KNOWN	CD300E	2	4	0.326047
chr17	74670578	74747335	74708956	ENSG00000172794.19	+	protein_coding	KNOWN	RAB37	16	10	0.156862
chr17	74672712	74677600	74675156	ENSG00000264659.1	-	antisense	KNOWN	CTD-2006K23.2	1	2	0.023097
chr17	74694311	74712978	74703644	ENSG00000186074.18	-	protein_coding	KNOWN	CD300LF	10	8	0.208075
chr17	74747319	74748912	74748115	ENSG00000266036.1	-	antisense	KNOWN	RP11-452I5.2	1	2	0.303801
chr17	74748613	74748699	74748656	ENSG00000264624.1	+	miRNA	KNOWN	MIR3615	1	1	0.303801
chr17	74748652	74769353	74759002	ENSG00000109062.9	+	protein_coding	KNOWN	SLC9A3R1	5	6	0.739725
chr17	74770547	74776367	74773457	ENSG00000109065.11	-	protein_coding	KNOWN	NAT9	29	7	1.146758
chr17	74776483	74839779	74808131	ENSG00000109066.13	+	protein_coding	KNOWN	TMEM104	7	10	0.867103
chr17	74842023	74861504	74851763	ENSG00000161509.13	-	protein_coding	KNOWN	GRIN2C	5	13	1.137618
chr17	74862497	74873031	74867764	ENSG00000161513.11	-	protein_coding	KNOWN	FDXR	20	13	1.151980
chr17	74877299	74893781	74885540	ENSG00000172782.11	-	protein_coding	KNOWN	FADS6	5	7	0.870413
chr17	74916084	74923256	74919670	ENSG00000182040.8	-	protein_coding	KNOWN	USH1G	2	3	0.813132
chr17	74924275	74933912	74929093	ENSG00000183034.12	+	protein_coding	KNOWN	OTOP2	3	7	0.992434
chr17	74935426	74936187	74935806	ENSG00000281273.1	-	protein_coding	KNOWN	AC087651.1	1	3	1.254721
chr17	74935719	74949992	74942855	ENSG00000182938.4	+	protein_coding	KNOWN	OTOP3	2	7	1.254721
chr17	74950743	74973166	74961954	ENSG00000167861.15	-	protein_coding	KNOWN	HID1	14	19	0.822381
chr17	74970704	74975728	74973216	ENSG00000263586.1	+	antisense	KNOWN	HID1-AS1	1	3	0.704331
chr17	74987632	75005800	74996716	ENSG00000109089.7	+	protein_coding	KNOWN	CDR2L	1	5	1.097261
chr17	75012670	75021261	75016965	ENSG00000167862.9	+	protein_coding	KNOWN	ICT1	4	6	1.004840
chr17	75031097	75031186	75031141	ENSG00000252545.1	+	snRNA	KNOWN	RNU6-362P	1	1	0.901953
chr17	75032575	75065889	75049232	ENSG00000180901.10	+	protein_coding	KNOWN	KCTD2	9	8	0.970437
chr17	75038085	75038357	75038221	ENSG00000281674.1	+	protein_coding	KNOWN	AC087651.2	1	3	0.901953
chr17	75038863	75046985	75042924	ENSG00000167863.11	-	protein_coding	KNOWN	ATP5H	5	6	0.901953
chr17	75041740	75042015	75041877	ENSG00000239607.3	+	misc_RNA	KNOWN	RN7SL573P	1	1	0.901953
chr17	75060491	75060620	75060555	ENSG00000270993.1	-	processed_pseudogene	KNOWN	RP11-1112G13.3	1	1	1.045532
chr17	75074306	75079549	75076927	ENSG00000232724.1	+	unitary_pseudogene	KNOWN	TRIM80P	1	4	0.840229
chr17	75087727	75106162	75096944	ENSG00000170190.15	+	protein_coding	KNOWN	SLC16A5	10	7	1.114974
chr17	75089862	75089974	75089918	ENSG00000206713.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.840229
chr17	75109952	75130265	75120108	ENSG00000125449.6	+	protein_coding	KNOWN	ARMC7	5	3	1.033698
chr17	75130225	75131795	75131010	ENSG00000125458.6	-	protein_coding	KNOWN	NT5C	14	5	0.775518
chr17	75130883	75133043	75131963	ENSG00000279035.1	+	TEC	KNOWN	RP11-649A18.3	1	1	0.775518
chr17	75135248	75168281	75151764	ENSG00000189159.15	-	protein_coding	KNOWN	HN1	12	6	0.781948
chr17	75138416	75141350	75139883	ENSG00000265800.1	-	sense_intronic	KNOWN	RP11-649A18.5	1	2	0.775518
chr17	75145261	75146546	75145903	ENSG00000263786.1	-	sense_intronic	KNOWN	RP11-649A18.4	1	2	0.775518
chr17	75145670	75145762	75145716	ENSG00000252042.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.775518
chr17	75165586	75182983	75174284	ENSG00000188612.11	-	protein_coding	KNOWN	SUMO2	3	4	0.625799
chr17	75205659	75235758	75220708	ENSG00000125450.10	+	protein_coding	KNOWN	NUP85	25	19	0.828805
chr17	75236599	75262363	75249481	ENSG00000125447.16	-	protein_coding	KNOWN	GGA3	23	18	0.952236
chr17	75261674	75266373	75264023	ENSG00000125445.10	+	protein_coding	KNOWN	MRPS7	7	5	0.896140
chr17	75266228	75271227	75268727	ENSG00000125457.13	-	protein_coding	KNOWN	MIF4GD	14	7	1.035991
chr17	75271369	75273895	75272632	ENSG00000263843.1	+	antisense	KNOWN	RP11-649A18.12	2	2	1.465450
chr17	75272981	75289510	75281245	ENSG00000125454.11	-	protein_coding	KNOWN	SLC25A19	15	9	1.465450
chr17	75318076	75405709	75361892	ENSG00000177885.13	-	protein_coding	KNOWN	GRB2	11	6	0.652574
chr17	75338827	75339147	75338987	ENSG00000228007.1	+	processed_pseudogene	KNOWN	AC011933.2	1	1	0.665031
chr17	75344405	75373662	75359033	ENSG00000265987.1	+	antisense	KNOWN	RP11-16C1.3	1	2	0.698594
chr17	75370947	75373736	75372341	ENSG00000264853.1	-	sense_intronic	KNOWN	RP11-16C1.2	1	1	0.463961
chr17	75394123	75394963	75394543	ENSG00000265342.1	+	antisense	KNOWN	RP11-16C1.1	1	2	0.625569
chr17	75406069	75406162	75406115	ENSG00000264511.1	+	miRNA	KNOWN	MIR3678	1	1	0.625569
chr17	75409086	75409188	75409137	ENSG00000223217.1	-	snRNA	KNOWN	RNU6-938P	1	1	0.625569
chr17	75431990	75432087	75432038	ENSG00000202332.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.827095
chr17	75441159	75500090	75470624	ENSG00000177728.14	+	protein_coding	KNOWN	TMEM94	33	32	1.009782
chr17	75496645	75496756	75496700	ENSG00000265636.1	+	miRNA	NOVEL	AC100787.1	1	1	1.323939
chr17	75498548	75498628	75498588	ENSG00000276372.1	+	miRNA	KNOWN	MIR6785	1	1	1.323939
chr17	75500261	75515583	75507922	ENSG00000177303.9	-	protein_coding	KNOWN	CASKIN2	7	20	1.345204
chr17	75516060	75524739	75520399	ENSG00000182173.12	+	protein_coding	KNOWN	TSEN54	11	11	1.382288
chr17	75525080	75575208	75550144	ENSG00000073350.13	+	protein_coding	KNOWN	LLGL2	22	26	1.195117
chr17	75588058	75626501	75607279	ENSG00000266714.6	+	protein_coding	KNOWN	MYO15B	36	63	1.106999
chr17	75626845	75667189	75647017	ENSG00000108469.14	-	protein_coding	KNOWN	RECQL5	19	20	1.228297
chr17	75633434	75641404	75637419	ENSG00000204323.5	+	protein_coding	KNOWN	SMIM5	3	3	1.399814
chr17	75646243	75647977	75647110	ENSG00000259120.2	+	protein_coding	KNOWN	SMIM6	2	3	1.399814
chr17	75667116	75708062	75687589	ENSG00000161526.14	+	protein_coding	KNOWN	SAP30BP	26	12	1.031558
chr17	75679474	75679967	75679720	ENSG00000264829.1	-	antisense	KNOWN	RP11-474I11.8	1	2	0.998882
chr17	75683543	75684799	75684171	ENSG00000264270.1	-	antisense	KNOWN	RP11-474I11.7	2	2	0.998882
chr17	75721328	75757818	75739573	ENSG00000132470.13	+	protein_coding	KNOWN	ITGB4	13	40	1.390351
chr17	75751594	75765711	75758652	ENSG00000108479.11	-	protein_coding	KNOWN	GALK1	9	9	1.413920
chr17	75776434	75785893	75781163	ENSG00000132475.8	-	protein_coding	KNOWN	H3F3B	13	4	1.227151
chr17	75784521	75784607	75784564	ENSG00000263565.1	-	miRNA	KNOWN	MIR4738	1	1	1.227151
chr17	75784771	75825799	75805285	ENSG00000132478.9	+	protein_coding	KNOWN	UNK	8	16	1.000376
chr17	75818815	75820055	75819435	ENSG00000266980.1	-	antisense	KNOWN	RP11-552F3.4	1	2	1.014916
chr17	75827225	75844717	75835971	ENSG00000092929.11	-	protein_coding	KNOWN	UNC13D	17	33	1.381624
chr17	75845699	75856507	75851103	ENSG00000132471.11	-	protein_coding	KNOWN	WBP2	19	9	1.286445
chr17	75874161	75878575	75876368	ENSG00000132481.6	-	protein_coding	KNOWN	TRIM47	7	6	1.276416
chr17	75876372	75879546	75877959	ENSG00000267801.1	+	antisense	KNOWN	RP11-552F3.9	1	1	1.276416
chr17	75880335	75897003	75888669	ENSG00000141569.10	-	protein_coding	KNOWN	TRIM65	6	6	1.233261
chr17	75897060	75900148	75898604	ENSG00000267342.1	+	antisense	KNOWN	RP11-552F3.10	1	3	1.173716
chr17	75898643	75905413	75902028	ENSG00000204316.12	-	protein_coding	KNOWN	MRPL38	17	9	1.173716
chr17	75898645	75930129	75914387	ENSG00000267426.5	-	protein_coding	KNOWN	RP11-552F3.12	3	32	1.230496
chr17	75909574	75941140	75925357	ENSG00000188878.17	-	protein_coding	KNOWN	FBF1	11	29	1.233703
chr17	75910723	75938149	75924436	ENSG00000281844.1	-	protein_coding	KNOWN	FBF1	1	28	1.239352
chr17	75941507	75979363	75960435	ENSG00000161533.11	-	protein_coding	KNOWN	ACOX1	13	15	0.909036
chr17	75943832	75945142	75944487	ENSG00000267615.1	+	antisense	KNOWN	RP11-552F3.13	1	2	1.183332
chr17	75979220	76000586	75989903	ENSG00000257949.6	+	protein_coding	KNOWN	TEN1	5	4	0.779501
chr17	75979231	76005999	75992615	ENSG00000261408.5	+	protein_coding	KNOWN	TEN1-CDK3	3	10	0.774982
chr17	76000906	76005999	76003452	ENSG00000250506.6	+	protein_coding	KNOWN	CDK3	3	7	0.757202
chr17	76004502	76027452	76015977	ENSG00000167880.7	-	protein_coding	KNOWN	EVPL	5	22	1.232288
chr17	76038775	76072653	76055714	ENSG00000167881.14	-	protein_coding	KNOWN	SRP68	13	16	0.885218
chr17	76071961	76083666	76077813	ENSG00000186919.12	+	protein_coding	KNOWN	ZACN	6	9	0.949387
chr17	76074794	76077541	76076167	ENSG00000182687.3	+	protein_coding	KNOWN	GALR2	1	2	0.949387
chr17	76081017	76121576	76101296	ENSG00000182473.21	-	protein_coding	KNOWN	EXOC7	21	20	1.119374
chr17	76090308	76091669	76090988	ENSG00000279382.1	+	TEC	KNOWN	RP11-449J21.3	1	1	1.385723
chr17	76098019	76098076	76098047	ENSG00000275360.1	-	miRNA	KNOWN	MIR6868	1	1	1.385723
chr17	76136333	76141299	76138816	ENSG00000129654.7	-	protein_coding	KNOWN	FOXJ1	1	3	1.259778
chr17	76140556	76154650	76147603	ENSG00000267128.1	+	antisense	KNOWN	RP11-449J21.5	5	8	1.125437
chr17	76142453	76240373	76191413	ENSG00000141576.14	-	protein_coding	KNOWN	RNF157	9	19	0.668589
chr17	76202644	76202796	76202720	ENSG00000267376.1	-	processed_pseudogene	KNOWN	ATP5LP6	1	1	0.581797
chr17	76225751	76226806	76226278	ENSG00000228218.1	-	processed_pseudogene	KNOWN	ATF4P3	1	1	0.499416
chr17	76265202	76271299	76268250	ENSG00000185262.8	+	protein_coding	KNOWN	UBALD2	3	3	0.996214
chr17	76274049	76307680	76290864	ENSG00000129646.13	-	protein_coding	KNOWN	QRICH2	4	19	1.004722
chr17	76309486	76384521	76347003	ENSG00000161542.16	-	protein_coding	KNOWN	PRPSAP1	12	10	0.836239
chr17	76319376	76319473	76319424	ENSG00000251779.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.796749
chr17	76337316	76337422	76337369	ENSG00000207169.1	+	snRNA	KNOWN	RNU6-24P	1	1	0.651717
chr17	76345761	76346081	76345921	ENSG00000267518.1	+	processed_pseudogene	KNOWN	RP11-794C22.2	1	1	0.651717
chr17	76376584	76387860	76382222	ENSG00000176170.13	+	protein_coding	KNOWN	SPHK1	10	8	0.881664
chr17	76389451	76453206	76421328	ENSG00000175931.12	-	protein_coding	KNOWN	UBE2O	6	18	0.947647
chr17	76430417	76431124	76430770	ENSG00000242931.1	-	processed_pseudogene	KNOWN	RPL7P49	1	1	0.644164
chr17	76453351	76470117	76461734	ENSG00000129673.9	+	protein_coding	KNOWN	AANAT	4	7	1.007251
chr17	76470891	76501790	76486340	ENSG00000129667.12	-	protein_coding	KNOWN	RHBDF2	18	19	1.122792
chr17	76527356	76551175	76539265	ENSG00000161544.9	-	protein_coding	KNOWN	CYGB	5	4	1.006362
chr17	76527586	76553578	76540582	ENSG00000214140.10	+	protein_coding	KNOWN	PRCD	13	7	0.989414
chr17	76545668	76557683	76551675	ENSG00000267546.2	-	antisense	KNOWN	RP11-666A8.8	4	3	0.892473
chr17	76549951	76550826	76550388	ENSG00000267543.1	+	sense_intronic	KNOWN	RP11-666A8.7	1	2	0.829855
chr17	76551352	76551750	76551551	ENSG00000272386.1	+	sense_intronic	KNOWN	RP11-666A8.12	1	1	0.818615
chr17	76557766	76565348	76561557	ENSG00000163597.14	+	processed_transcript	KNOWN	SNHG16	8	5	0.818615
chr17	76558791	76558868	76558829	ENSG00000274091.1	+	snoRNA	KNOWN	SNORD1C	1	1	0.818615
chr17	76561109	76561192	76561150	ENSG00000199961.1	+	snoRNA	KNOWN	SNORD1B	1	1	0.818615
chr17	76561634	76561705	76561669	ENSG00000278261.1	+	snoRNA	KNOWN	SNORD1A	1	1	0.818615
chr17	76563710	76586956	76575333	ENSG00000070731.9	-	protein_coding	KNOWN	ST6GALNAC2	10	9	1.003906
chr17	76569792	76571240	76570516	ENSG00000267078.1	+	antisense	KNOWN	RP11-666A8.9	1	1	1.036314
chr17	76595584	76595772	76595678	ENSG00000267084.1	-	processed_pseudogene	KNOWN	RP11-666A8.11	1	1	0.639960
chr17	76624761	76643838	76634299	ENSG00000070526.14	-	protein_coding	KNOWN	ST6GALNAC1	11	10	0.431722
chr17	76656320	76656422	76656371	ENSG00000199735.1	+	snRNA	KNOWN	RNU6-227P	1	1	0.589111
chr17	76671942	76673658	76672800	ENSG00000261335.1	+	antisense	KNOWN	RP11-318A15.2	1	1	0.662824
chr17	76672551	76711016	76691783	ENSG00000182534.13	-	protein_coding	KNOWN	MXRA7	7	5	0.780284
chr17	76703632	76703727	76703679	ENSG00000212418.1	-	misc_RNA	KNOWN	RNY4P36	1	1	0.892536
chr17	76709760	76710045	76709902	ENSG00000277382.1	+	antisense	KNOWN	RP11-318A15.8	1	1	0.843375
chr17	76712832	76726799	76719815	ENSG00000070495.14	-	protein_coding	KNOWN	JMJD6	8	8	0.587949
chr17	76721216	76721396	76721306	ENSG00000274051.1	-	misc_RNA	NOVEL	uc_338	1	1	0.587949
chr17	76726830	76733936	76730383	ENSG00000181038.13	+	protein_coding	KNOWN	METTL23	15	6	0.696038
chr17	76732978	76738522	76735750	ENSG00000267168.1	+	protein_coding	KNOWN	RP11-318A15.7	1	2	0.783042
chr17	76734115	76737374	76735744	ENSG00000161547.14	-	protein_coding	KNOWN	SRSF2	11	5	0.783042
chr17	76735865	76781449	76758657	ENSG00000092931.11	+	protein_coding	KNOWN	MFSD11	20	15	0.623638
chr17	76736450	76736548	76736499	ENSG00000207556.1	-	miRNA	KNOWN	MIR636	1	1	0.783042
chr17	76752912	76753015	76752963	ENSG00000200257.1	+	snRNA	KNOWN	RNU6-97P	1	1	0.623222
chr17	76799044	76807102	76803073	ENSG00000267065.2	+	lincRNA	KNOWN	CTD-2246P4.1	1	3	0.486851
chr17	76850176	76861836	76856006	ENSG00000267535.1	+	lincRNA	KNOWN	LINC00868	3	3	0.549981
chr17	76868456	76950393	76909424	ENSG00000167889.12	+	protein_coding	KNOWN	MGAT5B	9	18	0.621374
chr17	76950317	76969156	76959736	ENSG00000267568.6	-	processed_transcript	KNOWN	RP11-87G24.3	3	3	0.422637
chr17	76957023	76958222	76957622	ENSG00000267521.1	-	lincRNA	KNOWN	RP11-87G24.6	1	2	0.422637
chr17	76966285	76969530	76967907	ENSG00000280122.1	-	TEC	KNOWN	RP11-87G24.2	1	1	0.422637
chr17	77014880	77015138	77015009	ENSG00000276202.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.336096
chr17	77086716	77094990	77090853	ENSG00000234912.9	+	processed_transcript	KNOWN	SNHG20	5	4	0.602749
chr17	77086716	77217101	77151908	ENSG00000129657.14	+	protein_coding	KNOWN	SEC14L1	28	20	0.598111
chr17	77089307	77089493	77089400	ENSG00000275143.1	+	scaRNA	KNOWN	SCARNA16	1	1	0.448423
chr17	77089417	77089497	77089457	ENSG00000281678.1	+	miRNA	KNOWN	MIR6516	1	1	0.448423
chr17	77152561	77152674	77152617	ENSG00000222808.1	-	snRNA	KNOWN	RNU4-47P	1	1	0.547671
chr17	77198950	77199543	77199246	ENSG00000262870.1	-	processed_pseudogene	KNOWN	CYCSP40	1	2	0.511368
chr17	77257737	77281897	77269817	ENSG00000263718.2	-	lincRNA	KNOWN	RP11-285E9.6	3	3	0.716234
chr17	77264180	77264776	77264478	ENSG00000265121.1	-	lincRNA	KNOWN	RP11-285E9.5	1	1	0.716234
chr17	77280569	77500596	77390582	ENSG00000184640.17	+	protein_coding	KNOWN	SEPT9	47	12	0.867109
chr17	77373818	77377236	77375527	ENSG00000266998.1	-	antisense	KNOWN	RP11-936I5.1	1	1	1.087076
chr17	77396984	77397054	77397019	ENSG00000264060.1	-	miRNA	KNOWN	MIR4316	1	1	0.976515
chr17	77442109	77442213	77442161	ENSG00000200651.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.096132
chr17	77444704	77447167	77445935	ENSG00000279801.1	+	TEC	KNOWN	RP11-75C10.6	1	1	1.096132
chr17	77469068	77471045	77470056	ENSG00000267263.1	+	sense_intronic	KNOWN	RP11-75C10.7	1	2	0.748259
chr17	77469162	77472770	77470966	ENSG00000267016.1	-	antisense	KNOWN	RP11-75C10.9	1	3	0.719667
chr17	77526998	77536592	77531795	ENSG00000267665.1	+	lincRNA	KNOWN	RP11-13K12.2	4	4	0.349220
chr17	77546940	77563243	77555091	ENSG00000267506.5	+	lincRNA	KNOWN	RP11-13K12.1	3	3	0.508893
chr17	77563368	77568695	77566031	ENSG00000267466.1	-	lincRNA	KNOWN	RP11-13K12.5	1	2	0.558458
chr17	77571418	77572516	77571967	ENSG00000279572.1	+	TEC	KNOWN	RP11-13K12.6	1	1	0.386322
chr17	77722872	77728559	77725715	ENSG00000267790.1	-	lincRNA	KNOWN	RP11-316M20.1	1	2	-0.077933
chr17	77777090	77777464	77777277	ENSG00000278938.1	-	protein_coding	KNOWN	AC104981.1	1	1	0.571838
chr17	77879027	77884087	77881557	ENSG00000204283.3	-	lincRNA	KNOWN	FLJ45079	1	2	0.306117
chr17	77920098	77920258	77920178	ENSG00000238898.1	+	snRNA	KNOWN	RNU1-80P	1	1	0.353577
chr17	78004168	78108835	78056501	ENSG00000078687.16	+	protein_coding	KNOWN	TNRC6C	10	23	0.190501
chr17	78008421	78008855	78008638	ENSG00000279600.1	+	TEC	KNOWN	RP11-637C24.5	1	1	0.053311
chr17	78066258	78066761	78066509	ENSG00000267463.1	-	processed_pseudogene	KNOWN	UBE2V2P2	1	1	0.267563
chr17	78066947	78067053	78067000	ENSG00000238658.1	+	snRNA	KNOWN	RNU6-625P	1	1	0.267563
chr17	78107398	78111799	78109598	ENSG00000204282.4	-	processed_transcript	KNOWN	TNRC6C-AS1	2	2	0.388632
chr17	78110458	78132407	78121432	ENSG00000141524.15	-	protein_coding	KNOWN	TMC6	24	20	0.684438
chr17	78130770	78142968	78136869	ENSG00000167895.14	+	protein_coding	KNOWN	TMC8	9	16	0.986565
chr17	78146353	78166177	78156265	ENSG00000187997.11	+	protein_coding	KNOWN	C17orf99	6	5	0.899584
chr17	78157403	78159135	78158269	ENSG00000267679.1	+	processed_pseudogene	KNOWN	EIF5AP2	1	3	0.879981
chr17	78168558	78173527	78171042	ENSG00000108639.7	+	protein_coding	KNOWN	SYNGR2	9	5	0.789598
chr17	78174075	78187233	78180654	ENSG00000167900.11	-	protein_coding	KNOWN	TK1	6	8	0.752682
chr17	78187317	78207701	78197509	ENSG00000183077.15	+	protein_coding	KNOWN	AFMID	15	11	0.589836
chr17	78211618	78211908	78211763	ENSG00000267624.1	-	processed_pseudogene	KNOWN	RP11-219G17.6	1	1	0.837419
chr17	78214186	78225636	78219911	ENSG00000089685.14	+	protein_coding	KNOWN	BIRC5	11	5	0.837419
chr17	78231310	78240987	78236148	ENSG00000204278.12	+	protein_coding	KNOWN	TMEM235	6	6	0.503125
chr17	78248493	78254416	78251454	ENSG00000267676.1	-	unitary_pseudogene	KNOWN	THA1P	1	7	0.759705
chr17	78250346	78250932	78250639	ENSG00000279886.1	-	TEC	KNOWN	RP11-219G17.8	1	1	0.847188
chr17	78261349	78278492	78269920	ENSG00000204277.1	-	lincRNA	KNOWN	RP11-219G17.4	1	7	0.923627
chr17	78315729	78347798	78331763	ENSG00000267737.1	+	lincRNA	KNOWN	AC061992.2	2	3	0.744026
chr17	78356778	78360077	78358427	ENSG00000184557.4	-	protein_coding	KNOWN	SOCS3	2	2	0.920426
chr17	78360453	78373911	78367182	ENSG00000266970.1	+	lincRNA	KNOWN	RP11-806H10.4	2	5	0.900110
chr17	78370852	78371135	78370993	ENSG00000243870.3	-	misc_RNA	KNOWN	RN7SL236P	1	1	0.850534
chr17	78378640	78425114	78401877	ENSG00000087157.18	+	protein_coding	KNOWN	PGS1	15	10	0.758241
chr17	78398304	78398403	78398353	ENSG00000281727.1	+	miRNA	NOVEL	AC061992.1	1	1	0.771170
chr17	78399935	78400063	78399999	ENSG00000200063.1	+	snoRNA	NOVEL	SNORA30	1	1	0.771170
chr17	78423697	78577394	78500545	ENSG00000187775.16	-	protein_coding	KNOWN	DNAH17	11	81	0.804284
chr17	78484882	78503056	78493969	ENSG00000267432.5	+	processed_transcript	KNOWN	DNAH17-AS1	3	6	0.920395
chr17	78522247	78522828	78522537	ENSG00000267770.1	+	processed_pseudogene	KNOWN	RP11-559N14.6	1	1	0.683186
chr17	78532813	78533055	78532934	ENSG00000243426.3	-	misc_RNA	KNOWN	RN7SL454P	1	1	0.505099
chr17	78617389	78632057	78624723	ENSG00000267123.5	-	lincRNA	KNOWN	CTD-2357A8.3	3	5	0.695017
chr17	78674048	78782297	78728172	ENSG00000108669.16	-	protein_coding	KNOWN	CYTH1	17	14	0.497875
chr17	78691266	78691979	78691622	ENSG00000279570.1	-	TEC	KNOWN	CTD-2357A8.2	1	1	0.403078
chr17	78696694	78696797	78696745	ENSG00000252391.1	-	snRNA	KNOWN	RNU6-638P	1	1	0.403078
chr17	78787381	78841441	78814411	ENSG00000055483.19	-	protein_coding	KNOWN	USP36	24	21	0.646453
chr17	78845953	78846868	78846410	ENSG00000267355.2	-	processed_pseudogene	KNOWN	RPL9P29	1	2	0.586998
chr17	78852977	78925387	78889182	ENSG00000035862.12	-	protein_coding	KNOWN	TIMP2	5	5	1.004008
chr17	78855478	78855844	78855661	ENSG00000267601.1	+	antisense	KNOWN	RP11-323N12.5	1	1	1.039524
chr17	78870910	78903217	78887063	ENSG00000178404.9	-	protein_coding	KNOWN	CEP295NL	5	5	0.977367
chr17	78897264	78900152	78898708	ENSG00000279339.1	+	TEC	KNOWN	CTD-2373H9.3	1	1	1.035776
chr17	78903263	78905024	78904143	ENSG00000267491.1	+	antisense	KNOWN	CTD-2373H9.5	1	2	1.035776
chr17	78971238	78980109	78975673	ENSG00000108679.12	-	protein_coding	KNOWN	LGALS3BP	19	6	0.728445
chr17	78991717	79009867	79000792	ENSG00000171302.16	-	protein_coding	KNOWN	CANT1	16	6	0.867286
chr17	79019209	79027655	79023432	ENSG00000265096.1	-	antisense	KNOWN	C1QTNF1-AS1	2	3	0.388974
chr17	79022814	79049788	79036301	ENSG00000173918.14	+	protein_coding	KNOWN	C1QTNF1	12	5	0.499730
chr17	79074939	79088599	79081769	ENSG00000167280.16	+	protein_coding	KNOWN	ENGASE	10	14	0.543501
chr17	79089345	79516148	79302746	ENSG00000167281.18	-	protein_coding	KNOWN	RBFOX3	12	15	0.576743
chr17	79132722	79136402	79134562	ENSG00000266711.1	+	antisense	KNOWN	RP11-398J5.1	1	3	0.739513
chr17	79401970	79402032	79402001	ENSG00000278460.1	-	miRNA	NOVEL	AC020689.1	1	1	0.602026
chr17	79598032	79603921	79600976	ENSG00000263278.2	-	sense_intronic	KNOWN	CH17-351M24.1	2	2	0.469297
chr17	79707176	79707249	79707212	ENSG00000266665.1	-	miRNA	KNOWN	MIR4739	1	1	0.736511
chr17	79707266	79712317	79709791	ENSG00000267719.1	+	lincRNA	KNOWN	HP09025	1	2	0.751382
chr17	79730919	79742222	79736570	ENSG00000182156.9	+	protein_coding	KNOWN	ENPP7	2	6	0.836021
chr17	79778132	79787983	79783057	ENSG00000173894.10	+	protein_coding	KNOWN	CBX2	3	5	0.577419
chr17	79792132	79801683	79796907	ENSG00000141570.10	-	protein_coding	KNOWN	CBX8	4	5	0.682229
chr17	79800598	79802529	79801563	ENSG00000262768.2	+	antisense	KNOWN	RP11-353N14.1	1	2	0.682229
chr17	79823452	79827704	79825578	ENSG00000262772.1	+	lincRNA	KNOWN	RP11-353N14.2	1	3	1.002106
chr17	79833156	79839429	79836292	ENSG00000141582.14	-	protein_coding	KNOWN	CBX4	4	5	1.157926
chr17	79848058	79850110	79849084	ENSG00000262343.1	-	lincRNA	KNOWN	RP11-353N14.3	1	2	1.133406
chr17	79915252	79926725	79920988	ENSG00000262585.1	-	lincRNA	KNOWN	RP11-353N14.5	1	6	0.791184
chr17	79919357	79925462	79922409	ENSG00000262188.1	+	lincRNA	KNOWN	RP11-353N14.4	2	2	0.791184
chr17	79932343	80035848	79984095	ENSG00000167291.15	-	protein_coding	KNOWN	TBC1D16	9	12	0.871842
chr17	79952663	79952992	79952827	ENSG00000275516.1	+	antisense	KNOWN	RP11-353N14.7	1	1	0.891294
chr17	79991944	79992841	79992392	ENSG00000262172.1	-	sense_intronic	KNOWN	CTD-2529O21.1	1	2	0.947869
chr17	80023894	80026107	80025000	ENSG00000261978.1	+	antisense	KNOWN	CTD-2529O21.2	2	2	1.063977
chr17	80036632	80100613	80068622	ENSG00000141519.14	+	protein_coding	KNOWN	CCDC40	16	20	0.779785
chr17	80101556	80119879	80110717	ENSG00000171298.12	+	protein_coding	KNOWN	GAA	9	21	1.098035
chr17	80135214	80147183	80141198	ENSG00000141543.9	-	protein_coding	KNOWN	EIF4A3	8	12	0.741711
chr17	80147250	80148596	80147923	ENSG00000279259.1	+	TEC	KNOWN	RP11-334C17.3	1	1	0.741711
chr17	80149627	80149798	80149712	ENSG00000275479.1	+	lincRNA	KNOWN	RP11-334C17.6	1	1	0.741711
chr17	80169992	80209331	80189661	ENSG00000141527.16	+	protein_coding	KNOWN	CARD14	14	23	0.955512
chr17	80200673	80205949	80203311	ENSG00000262580.5	-	antisense	KNOWN	RP11-334C17.5	5	6	1.251988
chr17	80206716	80220923	80213819	ENSG00000181523.12	-	protein_coding	KNOWN	SGSH	17	8	1.139252
chr17	80219699	80253500	80236599	ENSG00000181045.14	+	protein_coding	KNOWN	SLC26A11	17	18	1.124432
chr17	80260866	80398786	80329826	ENSG00000173821.19	+	protein_coding	KNOWN	RNF213	20	69	0.926126
chr17	80315651	80316633	80316142	ENSG00000262979.1	+	sense_intronic	KNOWN	CTD-2047H16.2	1	2	1.082406
chr17	80333841	80334366	80334103	ENSG00000276863.1	-	antisense	KNOWN	CTD-2047H16.5	1	1	0.616947
chr17	80339898	80342058	80340978	ENSG00000280248.1	+	TEC	KNOWN	CTD-2047H16.3	1	1	0.616947
chr17	80351828	80415168	80383498	ENSG00000263069.5	-	antisense	KNOWN	CTD-2047H16.4	4	2	0.987785
chr17	80415165	80438086	80426625	ENSG00000173818.16	+	protein_coding	KNOWN	ENDOV	30	10	0.936335
chr17	80419418	80419493	80419455	ENSG00000264961.1	+	miRNA	KNOWN	MIR4730	1	1	0.790611
chr17	80453735	80454729	80454232	ENSG00000260369.2	-	lincRNA	KNOWN	CTD-2526A2.2	1	1	0.948401
chr17	80463451	80465593	80464522	ENSG00000279273.1	-	TEC	KNOWN	CTD-2526A2.4	1	1	0.948401
chr17	80467148	80477843	80472495	ENSG00000171246.5	-	protein_coding	KNOWN	NPTX1	4	5	1.032088
chr17	80515215	80515389	80515302	ENSG00000262000.1	+	processed_pseudogene	KNOWN	CTD-2526A2.5	1	1	0.806465
chr17	80515657	80515812	80515734	ENSG00000271340.1	+	processed_pseudogene	KNOWN	CTD-2526A2.6	1	1	0.806465
chr17	80542203	80542605	80542404	ENSG00000213128.3	+	processed_pseudogene	KNOWN	RPL32P31	1	1	0.647511
chr17	80544819	80966371	80755595	ENSG00000141564.13	+	protein_coding	KNOWN	RPTOR	11	34	0.744158
chr17	80602549	80602926	80602737	ENSG00000232083.3	-	processed_pseudogene	KNOWN	RPL31P7	1	1	0.505068
chr17	80801640	80805632	80803636	ENSG00000262833.1	-	antisense	KNOWN	RP11-28G8.1	1	4	0.437883
chr17	80940418	80942033	80941225	ENSG00000262313.1	-	antisense	KNOWN	CTD-2561B21.4	1	3	0.616972
chr17	80960766	80961713	80961239	ENSG00000262662.1	-	antisense	KNOWN	CTD-2561B21.3	1	2	1.169501
chr17	80966239	80971213	80968726	ENSG00000261924.1	-	antisense	KNOWN	CTD-2561B21.5	2	2	1.149587
chr17	80976454	80976948	80976701	ENSG00000240270.1	+	processed_pseudogene	KNOWN	RPL12P37	1	1	1.087911
chr17	80991598	81009517	81000557	ENSG00000176108.9	+	protein_coding	KNOWN	CHMP6	4	8	1.413920
chr17	80999509	81000130	80999819	ENSG00000263218.2	-	antisense	KNOWN	CTD-2561B21.7	2	2	1.413920
chr17	81003335	81005132	81004233	ENSG00000280351.2	+	TEC	KNOWN	CTD-2561B21.8	1	1	1.413920
chr17	81017969	81020011	81018990	ENSG00000262873.1	-	lincRNA	KNOWN	CTD-2561B21.11	2	3	0.867476
chr17	81023545	81025503	81024524	ENSG00000262098.1	-	lincRNA	KNOWN	CTD-2561B21.10	1	2	0.867476
chr17	81029130	81034881	81032005	ENSG00000226137.5	-	lincRNA	KNOWN	BAIAP2-AS1	2	2	0.979509
chr17	81035122	81117432	81076277	ENSG00000175866.15	+	protein_coding	KNOWN	BAIAP2	30	16	1.140791
chr17	81117295	81166077	81141686	ENSG00000181409.11	-	protein_coding	KNOWN	AATK	10	16	1.326427
chr17	81125276	81125373	81125324	ENSG00000207736.1	-	miRNA	KNOWN	MIR657	1	1	1.339004
chr17	81125870	81125978	81125924	ENSG00000211563.3	-	miRNA	NOVEL	AC115099.1	1	1	1.339004
chr17	81133196	81133308	81133252	ENSG00000221025.1	-	miRNA	KNOWN	MIR1250	1	1	1.448295
chr17	81135771	81136256	81136013	ENSG00000263167.1	+	antisense	KNOWN	RP11-149I9.2	1	2	1.448295
chr17	81165507	81183164	81174335	ENSG00000225180.6	+	antisense	KNOWN	AATK-AS1	2	6	1.188331
chr17	81189593	81222999	81206296	ENSG00000141577.13	-	protein_coding	KNOWN	CEP131	8	26	1.274058
chr17	81197393	81200288	81198840	ENSG00000262115.1	+	antisense	KNOWN	RP11-455O6.2	1	2	1.535747
chr17	81228277	81239091	81233684	ENSG00000167302.9	-	protein_coding	KNOWN	ENTHD2	12	12	1.387921
chr17	81228707	81233983	81231345	ENSG00000260005.6	+	antisense	KNOWN	AC027601.1	2	4	1.335558
chr17	81239239	81241281	81240260	ENSG00000224877.3	+	protein_coding	KNOWN	C17orf89	6	3	1.485277
chr17	81245000	81295547	81270273	ENSG00000157637.12	-	protein_coding	KNOWN	SLC38A10	11	16	1.335265
chr17	81251194	81251803	81251498	ENSG00000276101.1	+	antisense	KNOWN	RP11-455O6.8	1	1	1.415647
chr17	81262920	81265401	81264160	ENSG00000279187.1	+	TEC	KNOWN	RP11-455O6.5	1	1	1.415647
chr17	81303771	81309248	81306509	ENSG00000185168.5	-	lincRNA	KNOWN	LINC00482	2	4	1.232854
chr17	81311270	81330674	81320972	ENSG00000185332.6	-	protein_coding	KNOWN	TMEM105	5	3	1.264979
chr17	81339183	81339691	81339437	ENSG00000275542.1	-	lincRNA	KNOWN	RP11-455O6.9	1	1	1.376259
chr17	81345476	81345966	81345721	ENSG00000275966.1	-	lincRNA	KNOWN	RP11-1055B8.9	1	1	1.376259
chr17	81362272	81374214	81368243	ENSG00000263154.1	+	lincRNA	KNOWN	RP11-1055B8.2	1	3	1.209187
chr17	81376001	81385360	81380680	ENSG00000262223.6	-	lincRNA	KNOWN	RP11-1055B8.3	6	5	1.280064
chr17	81387415	81387766	81387590	ENSG00000274833.1	+	lincRNA	KNOWN	RP11-1055B8.10	1	1	1.280064
chr17	81388126	81390256	81389191	ENSG00000262877.4	-	lincRNA	KNOWN	RP11-1055B8.4	2	2	1.286495
chr17	81395475	81466332	81430903	ENSG00000266074.8	+	protein_coding	KNOWN	BAHCC1	8	29	1.417654
chr17	81395609	81397144	81396376	ENSG00000279692.1	-	TEC	KNOWN	RP11-1055B8.1	1	1	1.333367
chr17	81400716	81400778	81400747	ENSG00000266392.1	-	miRNA	KNOWN	MIR4740	1	1	1.333367
chr17	81451104	81451188	81451146	ENSG00000266189.1	-	miRNA	KNOWN	MIR3186	1	1	1.509660
chr17	81461013	81461937	81461475	ENSG00000263271.1	-	antisense	KNOWN	RP11-1055B8.8	1	2	1.509660
chr17	81480523	81481570	81481046	ENSG00000278200.1	-	lincRNA	KNOWN	RP13-766D20.4	1	1	1.301663
chr17	81509971	81523847	81516909	ENSG00000184009.9	-	protein_coding	KNOWN	ACTG1	16	7	1.858262
chr17	81511026	81511109	81511067	ENSG00000266077.1	-	miRNA	NOVEL	AC139149.1	1	1	1.859629
chr17	81513063	81513184	81513123	ENSG00000229947.1	+	unitary_pseudogene	KNOWN	RP13-766D20.1	1	1	1.859629
chr17	81514047	81527776	81520911	ENSG00000229848.1	+	antisense	KNOWN	RP13-766D20.2	2	2	1.859629
chr17	81528396	81537130	81532763	ENSG00000186765.11	+	protein_coding	KNOWN	FSCN2	3	5	1.453724
chr17	81539885	81553961	81546923	ENSG00000185504.16	-	protein_coding	KNOWN	FAAP100	7	9	1.397266
chr17	81556887	81648465	81602676	ENSG00000182446.13	-	protein_coding	KNOWN	NPLOC4	21	17	1.217843
chr17	81573490	81573602	81573546	ENSG00000207021.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.389515
chr17	81637171	81648749	81642960	ENSG00000182612.10	+	protein_coding	KNOWN	TSPAN10	5	4	1.344379
chr17	81650459	81663112	81656785	ENSG00000185527.11	-	protein_coding	KNOWN	PDE6G	6	4	1.628424
chr17	81665036	81666635	81665835	ENSG00000204237.4	-	protein_coding	KNOWN	OXLD1	7	2	1.628424
chr17	81666364	81673904	81670134	ENSG00000185298.12	+	protein_coding	KNOWN	CCDC137	6	7	1.525587
chr17	81676001	81676086	81676043	ENSG00000263853.1	+	miRNA	NOVEL	AC139530.1	1	1	1.429861
chr17	81681174	81683924	81682549	ENSG00000214087.8	-	protein_coding	KNOWN	ARL16	15	5	1.429861
chr17	81683326	81703138	81693232	ENSG00000185359.12	+	protein_coding	KNOWN	HGS	17	22	1.398524
chr17	81693757	81693869	81693813	ENSG00000277784.1	+	miRNA	KNOWN	MIR6786	1	1	1.382609
chr17	81697025	81697714	81697369	ENSG00000275902.1	-	antisense	KNOWN	RP13-1032I1.11	1	1	1.382609
chr17	81701324	81703300	81702312	ENSG00000262049.1	-	antisense	KNOWN	RP13-1032I1.7	1	1	1.382609
chr17	81703357	81707526	81705441	ENSG00000262814.6	+	protein_coding	KNOWN	MRPL12	2	7	1.382609
chr17	81703371	81720539	81711955	ENSG00000262660.1	+	protein_coding	KNOWN	RP13-1032I1.10	1	15	1.473733
chr17	81712236	81721016	81716626	ENSG00000183048.11	+	protein_coding	KNOWN	SLC25A10	8	12	1.531035
chr17	81718849	81719095	81718972	ENSG00000281517.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.531035
chr17	81804132	81814013	81809072	ENSG00000215644.9	+	protein_coding	KNOWN	GCGR	6	14	1.248694
chr17	81822361	81833302	81827831	ENSG00000225663.7	-	protein_coding	KNOWN	FAM195B	12	7	1.382045
chr17	81833492	81835050	81834271	ENSG00000182676.4	-	protein_coding	KNOWN	PPP1R27	3	3	1.680621
chr17	81843159	81860694	81851926	ENSG00000185624.14	-	protein_coding	KNOWN	P4HB	24	11	1.416959
chr17	81843165	81843958	81843561	ENSG00000262831.1	+	antisense	KNOWN	RP11-498C9.2	1	2	1.680621
chr17	81862778	81863102	81862940	ENSG00000278876.1	+	TEC	KNOWN	RP11-498C9.4	1	1	1.248334
chr17	81867721	81868552	81868136	ENSG00000262413.1	+	antisense	KNOWN	RP11-498C9.3	2	2	1.248334
chr17	81867721	81871406	81869563	ENSG00000141522.11	-	protein_coding	KNOWN	ARHGDIA	17	7	1.308651
chr17	81878425	81881106	81879765	ENSG00000263731.1	-	lincRNA	KNOWN	RP11-498C9.15	1	1	1.406307
chr17	81878667	81879557	81879112	ENSG00000263859.1	+	lincRNA	KNOWN	RP11-498C9.16	1	2	1.406307
chr17	81887844	81891586	81889715	ENSG00000183684.7	-	protein_coding	KNOWN	ALYREF	4	6	1.385935
chr17	81890790	81900991	81895890	ENSG00000141552.17	+	protein_coding	KNOWN	ANAPC11	23	5	1.358272
chr17	81900745	81902905	81901825	ENSG00000183979.7	+	protein_coding	KNOWN	NPB	2	2	1.358272
chr17	81900965	81911464	81906214	ENSG00000185813.10	-	protein_coding	KNOWN	PCYT2	18	14	1.382666
chr17	81911939	81921323	81916631	ENSG00000187531.13	-	protein_coding	KNOWN	SIRT7	21	10	1.533092
chr17	81918270	81927714	81922992	ENSG00000197063.10	-	protein_coding	KNOWN	MAFG	3	4	1.533092
chr17	81922899	81924511	81923705	ENSG00000264769.1	+	antisense	KNOWN	RP11-498C9.12	1	3	1.533092
chr17	81927829	81930753	81929291	ENSG00000265688.1	+	antisense	KNOWN	MAFG-AS1	2	3	1.604841
chr17	81932384	81942412	81937398	ENSG00000183010.16	-	protein_coding	KNOWN	PYCR1	17	8	1.811332
chr17	81932398	81933058	81932728	ENSG00000263585.1	+	antisense	KNOWN	RP11-498C9.13	1	2	1.811332
chr17	81939645	81947233	81943439	ENSG00000185105.4	-	protein_coding	KNOWN	MYADML2	2	3	1.811332
chr17	81941869	81947601	81944735	ENSG00000235296.1	+	antisense	KNOWN	AC137723.5	1	2	1.811332
chr17	81952507	81961840	81957173	ENSG00000185269.11	-	protein_coding	KNOWN	NOTUM	4	11	1.435351
chr17	81965632	81966589	81966110	ENSG00000264735.1	-	lincRNA	KNOWN	RP11-498C9.17	1	1	1.435351
chr17	81976807	82017406	81997106	ENSG00000169696.15	+	protein_coding	KNOWN	ASPSCR1	21	17	1.495286
chr17	82018702	82024107	82021404	ENSG00000169689.14	-	protein_coding	KNOWN	STRA13	11	5	1.625970
chr17	82023302	82031151	82027226	ENSG00000169683.7	+	protein_coding	KNOWN	LRRC45	6	17	1.630803
chr17	82024633	82024692	82024662	ENSG00000275682.1	+	miRNA	NOVEL	AC137723.1	1	1	1.625970
chr17	82031624	82034204	82032914	ENSG00000169750.8	+	protein_coding	KNOWN	RAC3	4	6	1.658898
chr17	82035136	82037732	82036434	ENSG00000169738.7	-	protein_coding	KNOWN	DCXR	21	8	1.658898
chr17	82035403	82035800	82035601	ENSG00000279372.1	-	TEC	KNOWN	RP11-1182P23.5	1	1	1.658898
chr17	82037905	82039380	82038642	ENSG00000264569.1	+	antisense	KNOWN	RP13-650J16.1	2	2	1.658898
chr17	82047902	82051831	82049866	ENSG00000169733.11	-	protein_coding	KNOWN	RFNG	12	8	1.595638
chr17	82050691	82057470	82054080	ENSG00000169727.12	+	protein_coding	KNOWN	GPS1	28	14	1.523227
chr17	82057506	82065887	82061696	ENSG00000169718.17	-	protein_coding	KNOWN	DUS1L	16	14	1.523227
chr17	82078333	82098332	82088332	ENSG00000169710.7	-	protein_coding	KNOWN	FASN	7	43	1.559862
chr17	82101460	82212830	82157145	ENSG00000176155.18	-	protein_coding	KNOWN	CCDC57	19	18	1.198275
chr17	82153430	82154815	82154122	ENSG00000265678.1	+	antisense	KNOWN	RP11-1376P16.2	1	2	1.376649
chr17	82160056	82160452	82160254	ENSG00000266654.1	+	antisense	KNOWN	RP11-1376P16.1	1	2	1.376649
chr17	82214227	82217352	82215789	ENSG00000264548.1	+	antisense	KNOWN	RP13-516M14.2	1	2	1.282935
chr17	82228397	82261129	82244763	ENSG00000141526.14	+	protein_coding	KNOWN	SLC16A3	22	5	1.504033
chr17	82236668	82236728	82236698	ENSG00000275505.1	+	miRNA	KNOWN	MIR6787	1	1	1.559915
chr17	82239023	82273731	82256377	ENSG00000141551.14	-	protein_coding	KNOWN	CSNK1D	26	10	1.438801
chr17	82244770	82245591	82245180	ENSG00000275888.1	+	antisense	KNOWN	RP13-516M14.10	1	2	1.559915
chr17	82249067	82251844	82250455	ENSG00000280407.2	+	TEC	KNOWN	RP13-516M14.8	2	2	1.477216
chr17	82290046	82292814	82291430	ENSG00000265692.1	-	lincRNA	KNOWN	RP13-516M14.4	1	2	1.258729
chr17	82293716	82294910	82294313	ENSG00000260563.3	+	lincRNA	KNOWN	RP13-516M14.1	1	1	1.258729
chr17	82314868	82317602	82316235	ENSG00000173762.7	-	protein_coding	KNOWN	CD7	7	4	1.424412
chr17	82321024	82334074	82327549	ENSG00000141574.7	-	protein_coding	KNOWN	SECTM1	8	5	1.362482
chr17	82359247	82363776	82361511	ENSG00000182459.4	+	protein_coding	KNOWN	TEX19	1	2	1.192156
chr17	82362349	82363196	82362772	ENSG00000278964.1	-	TEC	KNOWN	RP13-20L14.2	1	1	1.192156
chr17	82374230	82375586	82374908	ENSG00000181408.3	+	protein_coding	KNOWN	UTS2R	1	1	1.013989
chr17	82381110	82382690	82381900	ENSG00000260011.2	-	lincRNA	KNOWN	RP13-20L14.1	1	2	1.013989
chr17	82389223	82418637	82403930	ENSG00000181396.12	-	protein_coding	KNOWN	OGFOD3	12	10	1.052053
chr17	82400703	82401382	82401042	ENSG00000264812.1	-	sense_intronic	KNOWN	RP13-20L14.4	1	1	1.106738
chr17	82417226	82417321	82417273	ENSG00000201239.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.928856
chr17	82418318	82442645	82430481	ENSG00000169660.15	+	protein_coding	KNOWN	HEXDC	15	13	1.025659
chr17	82425498	82427310	82426404	ENSG00000279066.1	+	sense_intronic	KNOWN	HEXDC-IT1	1	1	0.928856
chr17	82442589	82450829	82446709	ENSG00000178927.16	-	protein_coding	KNOWN	C17orf62	41	8	1.127834
chr17	82454273	82458521	82456397	ENSG00000265458.1	-	antisense	KNOWN	RP13-20L14.6	2	3	1.241739
chr17	82458180	82490537	82474358	ENSG00000141562.17	+	protein_coding	KNOWN	NARF	27	13	1.000807
chr17	82462601	82464255	82463428	ENSG00000279744.1	+	TEC	KNOWN	RP13-20L14.10	1	1	1.241739
chr17	82476597	82477924	82477260	ENSG00000266445.1	-	antisense	KNOWN	RP13-991F5.2	1	2	0.857036
chr17	82482098	82483388	82482743	ENSG00000266236.1	+	sense_intronic	KNOWN	NARF-IT1	1	2	0.857036
chr17	82519713	82644662	82582187	ENSG00000141568.19	+	protein_coding	KNOWN	FOXK2	13	19	0.895464
chr17	82576616	82577391	82577003	ENSG00000265136.1	-	processed_pseudogene	KNOWN	RP13-638C3.6	1	2	0.863051
chr17	82578023	82578616	82578319	ENSG00000262652.1	+	sense_intronic	KNOWN	RP13-638C3.2	1	1	0.863051
chr17	82587313	82588411	82587862	ENSG00000262147.1	-	antisense	KNOWN	RP13-638C3.3	1	2	0.863051
chr17	82602989	82604178	82603583	ENSG00000261845.2	-	antisense	KNOWN	RP13-638C3.4	1	1	1.035748
chr17	82614562	82648553	82631557	ENSG00000141580.15	-	protein_coding	KNOWN	WDR45B	10	10	0.867085
chr17	82648849	82650657	82649753	ENSG00000279613.1	+	TEC	KNOWN	RP13-638C3.5	1	1	0.960125
chr17	82654973	82698728	82676850	ENSG00000141542.10	-	protein_coding	KNOWN	RAB40B	11	7	0.921798
chr17	82668233	82668307	82668270	ENSG00000266107.1	-	miRNA	KNOWN	MIR4525	1	1	0.945914
chr17	82713908	82716255	82715081	ENSG00000263063.1	-	lincRNA	KNOWN	RP11-388C12.1	1	2	0.984351
chr17	82716683	82730328	82723505	ENSG00000141560.14	+	protein_coding	KNOWN	FN3KRP	9	7	0.987589
chr17	82718516	82718640	82718578	ENSG00000280575.1	-	protein_coding	KNOWN	AC024361.1	1	2	0.984351
chr17	82729164	82734143	82731653	ENSG00000263321.1	-	lincRNA	KNOWN	RP11-388C12.5	1	2	1.096136
chr17	82735575	82751197	82743386	ENSG00000167363.13	+	protein_coding	KNOWN	FN3K	5	6	1.090581
chr17	82745068	82745709	82745388	ENSG00000262410.1	+	sense_intronic	KNOWN	RP11-388C12.8	1	1	1.118660
chr17	82752064	82945922	82848993	ENSG00000141556.20	+	protein_coding	KNOWN	TBCD	26	40	0.771619
chr17	82777954	82778039	82777996	ENSG00000264383.1	-	miRNA	NOVEL	AC068014.1	1	1	0.565923
chr17	82778477	82778574	82778525	ENSG00000265461.1	-	miRNA	NOVEL	AC068014.2	1	1	0.565923
chr17	82795486	82796095	82795790	ENSG00000263098.1	-	antisense	KNOWN	RP11-567O16.1	1	2	0.563689
chr17	82829435	82840578	82835006	ENSG00000141579.6	-	protein_coding	KNOWN	ZNF750	2	3	0.437557
chr17	82918282	82918785	82918533	ENSG00000262663.1	+	lincRNA	KNOWN	RP11-497H17.1	1	1	0.871683
chr17	82942155	83051810	82996982	ENSG00000175711.8	-	protein_coding	KNOWN	B3GNTL1	11	13	0.627514
chr17	82978525	82981738	82980131	ENSG00000262339.5	+	antisense	KNOWN	RP11-1197K16.2	4	3	0.985077
chr17	83079691	83095119	83087405	ENSG00000176845.12	+	protein_coding	KNOWN	METRNL	5	4	1.202951
chr17	83098377	83098987	83098682	ENSG00000274370.1	+	lincRNA	KNOWN	AC144831.3	1	1	1.182938
chr17	83104255	83106910	83105582	ENSG00000261888.1	+	lincRNA	KNOWN	AC144831.1	1	1	1.182938
chr17	83132647	83136150	83134398	ENSG00000279143.1	-	TEC	KNOWN	AC139099.7	1	1	0.571518
chr17	83144131	83177607	83160869	ENSG00000262898.1	+	lincRNA	KNOWN	AC139099.4	1	3	0.416232
chr17	83211996	83221190	83216593	ENSG00000262952.1	+	lincRNA	KNOWN	AC139099.6	2	3	0.802485
chr17	83220527	83227721	83224124	ENSG00000262094.1	-	lincRNA	KNOWN	AC139099.5	4	2	0.802485
chr17	83226897	83240804	83233850	ENSG00000232938.2	+	transcribed_processed_pseudogene	KNOWN	RPL23AP87	2	4	0.392032
chr17_GL000205v2_random	9151	9226	9188	ENSG00000275890.1	+	miRNA	NOVEL	AC011841.4	1	1	NA
chr17_GL000205v2_random	9864	9946	9905	ENSG00000275879.1	+	miRNA	NOVEL	AC011841.3	1	1	NA
chr17_GL000205v2_random	22467	22549	22508	ENSG00000276356.1	+	miRNA	NOVEL	AC011841.6	1	1	NA
chr17_GL000205v2_random	29936	30018	29977	ENSG00000276245.1	+	miRNA	NOVEL	AC011841.5	1	1	NA
chr17_GL000205v2_random	35491	35573	35532	ENSG00000274990.1	+	miRNA	NOVEL	AC011841.2	1	1	NA
chr17_GL000205v2_random	38272	38354	38313	ENSG00000277993.1	+	miRNA	NOVEL	AC011841.7	1	1	NA
chr17_GL000205v2_random	93050	93150	93100	ENSG00000276932.1	-	misc_RNA	NOVEL	Y_RNA	1	1	NA
chr17_GL000205v2_random	99351	104855	102103	ENSG00000273496.1	-	protein_coding	NOVEL	AC011841.1	1	4	NA
chr18	11103	15928	13515	ENSG00000262352.1	+	lincRNA	KNOWN	AP005530.1	2	3	0.433029
chr18	14195	16898	15546	ENSG00000263305.1	-	lincRNA	KNOWN	AP005530.2	2	2	0.433029
chr18	45034	46047	45540	ENSG00000262181.2	+	unprocessed_pseudogene	KNOWN	FAM166AP6	1	4	-0.303493
chr18	47390	49557	48473	ENSG00000173213.9	-	transcribed_unprocessed_pseudogene	KNOWN	TUBB8P12	2	4	-0.303493
chr18	49815	73545	61680	ENSG00000282965.1	-	lincRNA	KNOWN	RP11-683L23.7	2	3	0.106434
chr18	80140	88570	84355	ENSG00000262081.2	-	unprocessed_pseudogene	KNOWN	IL9RP4	1	8	-0.152546
chr18	94202	94330	94266	ENSG00000274446.1	-	processed_pseudogene	KNOWN	RP11-683L23.6	1	1	0.330649
chr18	109065	122219	115642	ENSG00000263006.6	+	transcribed_unprocessed_pseudogene	KNOWN	ROCK1P1	3	5	0.035125
chr18	112256	112339	112297	ENSG00000277521.1	-	miRNA	KNOWN	MIR8078	1	1	0.012538
chr18	158383	214629	186506	ENSG00000101557.14	+	protein_coding	KNOWN	USP14	9	16	-0.133448
chr18	214520	268050	241285	ENSG00000079134.11	-	protein_coding	KNOWN	THOC1	21	21	-0.252881
chr18	268148	270278	269213	ENSG00000263884.1	+	lincRNA	KNOWN	RP11-705O1.8	1	1	-0.434771
chr18	316737	319165	317951	ENSG00000264514.1	+	lincRNA	KNOWN	RP11-720L2.4	1	2	0.239890
chr18	316740	500722	408731	ENSG00000158270.11	-	protein_coding	KNOWN	COLEC12	3	10	0.128879
chr18	423744	424416	424080	ENSG00000265477.1	-	sense_intronic	KNOWN	RP11-720L2.2	1	2	0.131738
chr18	508568	515294	511931	ENSG00000264265.1	-	lincRNA	KNOWN	RP11-14P20.1	1	3	0.200348
chr18	580357	582114	581235	ENSG00000177143.4	+	protein_coding	KNOWN	CETN1	1	1	0.426109
chr18	586517	586850	586683	ENSG00000222174.1	-	misc_RNA	KNOWN	RN7SKP146	1	1	0.426109
chr18	596988	650334	623661	ENSG00000079101.16	+	protein_coding	KNOWN	CLUL1	13	11	-0.124009
chr18	603166	603258	603212	ENSG00000239158.1	-	miRNA	NOVEL	AP001178.1	1	1	-0.190816
chr18	641320	658340	649830	ENSG00000176912.3	-	processed_transcript	KNOWN	TYMSOS	2	2	0.054496
chr18	650229	652843	651536	ENSG00000266456.1	+	antisense	KNOWN	RP11-806L2.2	1	2	0.155417
chr18	653985	657259	655622	ENSG00000263727.1	-	sense_intronic	KNOWN	RP11-806L2.5	1	2	0.155417
chr18	657604	673578	665591	ENSG00000176890.15	+	protein_coding	KNOWN	TYMS	6	7	0.182749
chr18	670324	712676	691500	ENSG00000132199.18	-	protein_coding	KNOWN	ENOSF1	22	16	0.371873
chr18	706523	707648	707085	ENSG00000265490.1	+	antisense	KNOWN	RP11-806L2.6	1	2	0.466116
chr18	721588	812546	767067	ENSG00000176105.13	-	protein_coding	KNOWN	YES1	5	12	0.062570
chr18	735746	737459	736602	ENSG00000266171.1	+	antisense	KNOWN	RP11-769O8.1	1	1	-0.021390
chr18	738058	739662	738860	ENSG00000264635.1	-	sense_intronic	KNOWN	RP11-769O8.3	1	1	-0.021390
chr18	738058	739444	738751	ENSG00000264339.1	+	antisense	KNOWN	RP11-769O8.2	1	2	-0.021390
chr18	797989	798135	798062	ENSG00000206687.1	-	snRNA	KNOWN	RNU1-109P	1	1	0.208805
chr18	813274	813756	813515	ENSG00000273355.1	+	lincRNA	KNOWN	RP11-672L10.6	1	1	0.183332
chr18	832238	832469	832353	ENSG00000266575.1	+	processed_pseudogene	KNOWN	BOLA2P1	1	1	-0.069000
chr18	856526	857045	856785	ENSG00000264179.1	+	processed_pseudogene	KNOWN	RP11-672L10.5	1	1	0.391552
chr18	894435	907680	901057	ENSG00000265671.1	-	antisense	KNOWN	RP11-672L10.3	1	2	0.003455
chr18	902766	906667	904716	ENSG00000265179.6	-	processed_transcript	KNOWN	RP11-672L10.2	4	3	0.003455
chr18	904943	912172	908557	ENSG00000141433.12	+	protein_coding	KNOWN	ADCYAP1	4	5	-0.115848
chr18	926083	927993	927038	ENSG00000259837.1	-	lincRNA	KNOWN	RP11-672L10.1	1	2	-0.393435
chr18	962592	976883	969737	ENSG00000272461.1	-	lincRNA	KNOWN	RP11-689C9.1	1	3	-0.328723
chr18	976589	1174823	1075706	ENSG00000263551.5	+	lincRNA	KNOWN	RP11-78F17.1	5	5	-0.338357
chr18	1159198	1160404	1159801	ENSG00000263505.1	-	processed_pseudogene	KNOWN	RP11-78F17.3	1	2	-0.214897
chr18	1176790	1177012	1176901	ENSG00000266251.1	-	processed_pseudogene	KNOWN	COX6CP3	1	1	-0.484655
chr18	1254383	1408344	1331363	ENSG00000132204.13	-	lincRNA	KNOWN	LINC00470	11	7	-0.427028
chr18	1323794	1324085	1323939	ENSG00000199197.1	-	misc_RNA	KNOWN	RN7SKP72	1	1	-0.501849
chr18	1357651	1357942	1357796	ENSG00000263396.1	+	processed_pseudogene	KNOWN	RP11-288C17.3	1	1	-0.502557
chr18	1362445	1363873	1363159	ENSG00000265417.1	-	processed_pseudogene	KNOWN	RP11-288C17.1	1	2	-0.502557
chr18	1509183	1647097	1578140	ENSG00000266602.1	+	lincRNA	KNOWN	RP11-476K15.1	1	4	-0.560249
chr18	1655177	1779955	1717566	ENSG00000266450.1	+	lincRNA	KNOWN	CTD-2015H3.2	1	3	-0.660356
chr18	1780329	1782064	1781196	ENSG00000264080.1	+	lincRNA	KNOWN	CTD-2015H3.1	1	3	-0.488991
chr18	1883524	2240847	2062185	ENSG00000263745.5	-	lincRNA	KNOWN	RP11-161I6.2	4	6	-0.440586
chr18	1927727	1929094	1928410	ENSG00000264189.1	-	processed_pseudogene	KNOWN	CTD-2533G20.1	1	2	-0.571725
chr18	2537525	2571509	2554517	ENSG00000101574.14	-	protein_coding	KNOWN	METTL4	7	9	-0.227081
chr18	2555358	2555492	2555425	ENSG00000238575.1	+	snoRNA	NOVEL	snoU109	1	1	-0.400122
chr18	2561172	2562220	2561696	ENSG00000266783.1	-	sense_intronic	KNOWN	RP11-715F3.2	1	1	-0.400122
chr18	2568392	2569122	2568757	ENSG00000264150.1	+	processed_pseudogene	KNOWN	RP11-715F3.1	1	2	-0.400122
chr18	2571511	2616635	2594073	ENSG00000080986.12	+	protein_coding	KNOWN	NDC80	5	17	-0.018352
chr18	2593674	2594913	2594293	ENSG00000235422.1	-	processed_pseudogene	KNOWN	KATNBL1P3	1	2	0.007928
chr18	2621090	2621201	2621145	ENSG00000202224.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.139334
chr18	2649761	2649867	2649814	ENSG00000200875.1	-	snRNA	KNOWN	RNU6-340P	1	1	0.234792
chr18	2652170	2655395	2653782	ENSG00000266405.3	-	transcribed_processed_pseudogene	KNOWN	CBX3P2	2	2	0.171281
chr18	2655738	2805017	2730377	ENSG00000101596.14	+	protein_coding	KNOWN	SMCHD1	13	48	-0.048461
chr18	2688564	2833065	2760814	ENSG00000266049.1	-	antisense	KNOWN	RP11-703M24.5	2	4	-0.051219
chr18	2778941	2779057	2778999	ENSG00000207034.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.013618
chr18	2847030	2915993	2881511	ENSG00000132205.10	+	protein_coding	KNOWN	EMILIN2	3	8	0.295484
chr18	2916994	3013315	2965154	ENSG00000101577.9	-	protein_coding	KNOWN	LPIN2	4	20	0.296886
chr18	2920966	2921685	2921325	ENSG00000272625.1	+	antisense	KNOWN	RP11-737O24.5	1	1	0.558560
chr18	2945550	2946890	2946220	ENSG00000263606.1	-	transcribed_processed_pseudogene	KNOWN	RP11-737O24.3	2	1	0.434725
chr18	2948238	2960756	2954497	ENSG00000265907.1	+	antisense	KNOWN	RP11-737O24.2	2	4	0.168224
chr18	2967018	2985410	2976214	ENSG00000266397.1	+	antisense	KNOWN	RP11-737O24.1	1	4	0.239660
chr18	2990652	2991078	2990865	ENSG00000264186.1	+	processed_pseudogene	KNOWN	SNRPCP4	1	1	0.194242
chr18	3025069	3025387	3025228	ENSG00000277447.1	-	processed_pseudogene	KNOWN	RP11-193E15.4	1	1	0.308415
chr18	3025434	3025566	3025500	ENSG00000252258.1	-	snoRNA	NOVEL	SNORA70	1	1	0.308415
chr18	3066807	3220108	3143457	ENSG00000101605.12	-	protein_coding	KNOWN	MYOM1	7	38	-0.018054
chr18	3093568	3093629	3093598	ENSG00000252353.1	+	snRNA	KNOWN	RNU7-25P	1	1	0.033440
chr18	3190397	3247277	3218837	ENSG00000265399.1	+	antisense	KNOWN	RP13-270P17.2	1	5	0.048068
chr18	3246401	3247086	3246743	ENSG00000272688.1	-	lincRNA	KNOWN	RP13-270P17.3	1	1	0.247270
chr18	3247481	3256236	3251858	ENSG00000101608.12	+	protein_coding	KNOWN	MYL12A	12	5	0.250662
chr18	3255436	3261850	3258643	ENSG00000264235.5	-	antisense	KNOWN	RP13-270P17.1	2	3	0.252032
chr18	3261909	3278284	3270096	ENSG00000118680.12	+	protein_coding	KNOWN	MYL12B	4	4	0.167187
chr18	3284145	3327292	3305718	ENSG00000266578.1	+	lincRNA	KNOWN	RP11-838N2.5	1	2	-0.004315
chr18	3347776	3350559	3349167	ENSG00000259256.1	-	lincRNA	KNOWN	RP11-838N2.3	1	3	-0.135417
chr18	3377916	3378247	3378081	ENSG00000240364.1	-	processed_pseudogene	KNOWN	RPL31P59	1	1	0.091992
chr18	3394889	3395312	3395100	ENSG00000265243.1	+	IG_C_pseudogene	KNOWN	IGLJCOR18	1	1	0.189289
chr18	3406342	3406818	3406580	ENSG00000243720.1	-	processed_pseudogene	KNOWN	RPL21P127	1	1	0.189289
chr18	3411608	3459978	3435793	ENSG00000177426.20	+	protein_coding	KNOWN	TGIF1	23	4	0.185052
chr18	3415145	3415580	3415362	ENSG00000263460.1	+	transcribed_processed_pseudogene	KNOWN	BOD1P1	1	1	0.162002
chr18	3466250	3478978	3472614	ENSG00000266835.5	+	lincRNA	KNOWN	GAPLINC	4	4	0.290352
chr18	3496032	4455335	3975683	ENSG00000170579.14	-	protein_coding	KNOWN	DLGAP1	22	13	-0.232210
chr18	3571215	3571511	3571363	ENSG00000241223.3	-	misc_RNA	KNOWN	RN7SL39P	1	1	0.011072
chr18	3580169	3580754	3580461	ENSG00000266373.1	+	processed_pseudogene	KNOWN	RP11-710M11.1	1	1	0.011072
chr18	3593732	3598352	3596042	ENSG00000177337.7	+	antisense	KNOWN	DLGAP1-AS1	6	3	0.790822
chr18	3603000	3608336	3605668	ENSG00000262001.1	+	antisense	KNOWN	DLGAP1-AS2	2	2	0.790822
chr18	3653410	3656282	3654846	ENSG00000266401.1	+	antisense	KNOWN	RP11-874J12.4	1	3	-0.032815
chr18	3770017	3771430	3770723	ENSG00000266513.1	-	sense_intronic	KNOWN	RP11-874J12.3	1	2	-0.003933
chr18	3878180	3897069	3887624	ENSG00000263724.1	+	antisense	KNOWN	DLGAP1-AS3	2	3	-0.071691
chr18	3885353	3885432	3885392	ENSG00000275518.1	+	miRNA	KNOWN	MIR6718	1	1	-0.158816
chr18	3894699	3894805	3894752	ENSG00000207278.1	-	snRNA	KNOWN	RNU6-831P	1	1	0.073958
chr18	3962353	4013943	3988148	ENSG00000263878.1	+	antisense	KNOWN	DLGAP1-AS4	1	5	0.002239
chr18	3977649	3978615	3978132	ENSG00000250933.1	-	processed_pseudogene	KNOWN	GAPDHP66	1	1	0.170418
chr18	4264602	4295405	4280003	ENSG00000261520.5	+	antisense	KNOWN	DLGAP1-AS5	4	3	-0.517788
chr18	4430945	4431152	4431048	ENSG00000264246.1	+	processed_pseudogene	KNOWN	RP11-138C24.2	1	1	-0.647417
chr18	4459230	4459458	4459344	ENSG00000265545.1	+	processed_pseudogene	KNOWN	RP11-183C12.1	1	1	-0.606500
chr18	4775054	5004537	4889795	ENSG00000266268.5	-	lincRNA	KNOWN	RP11-172F10.1	2	5	-0.480792
chr18	4988092	4988169	4988130	ENSG00000222463.1	-	miRNA	NOVEL	AP005138.1	1	1	-0.653435
chr18	5002759	5003254	5003006	ENSG00000264775.1	-	processed_pseudogene	KNOWN	PPIAP14	1	1	-0.361726
chr18	5081182	5095815	5088498	ENSG00000265514.1	+	lincRNA	KNOWN	RP11-92G19.2	2	2	-0.167530
chr18	5132749	5133229	5132989	ENSG00000215368.5	-	processed_pseudogene	KNOWN	BOD1P2	1	1	-0.726982
chr18	5145285	5197503	5171394	ENSG00000231824.3	-	protein_coding	KNOWN	C18orf42	2	2	-0.577019
chr18	5159332	5171026	5165179	ENSG00000266153.1	+	lincRNA	KNOWN	RP11-190I17.2	1	3	-0.625031
chr18	5232876	5238526	5235701	ENSG00000265091.5	-	lincRNA	KNOWN	RP11-835E18.5	2	3	-0.630899
chr18	5236724	5238598	5237661	ENSG00000264575.1	-	lincRNA	KNOWN	LINC00526	1	1	-0.630899
chr18	5237826	5246508	5242167	ENSG00000263753.6	+	lincRNA	KNOWN	LINC00667	6	3	-0.630899
chr18	5240255	5241167	5240711	ENSG00000265188.1	-	processed_pseudogene	KNOWN	RP11-835E18.4	1	1	-0.630899
chr18	5289019	5297053	5293036	ENSG00000198081.10	-	protein_coding	KNOWN	ZBTB14	8	4	-0.360885
chr18	5310396	5317664	5314030	ENSG00000264254.1	+	lincRNA	KNOWN	CTD-3096M3.1	1	2	-0.393435
chr18	5381641	5385330	5383485	ENSG00000266288.1	-	lincRNA	KNOWN	CTD-3096M3.2	1	2	-0.224192
chr18	5392381	5630700	5511540	ENSG00000082397.16	-	protein_coding	KNOWN	EPB41L3	35	23	-0.356266
chr18	5463627	5480975	5472301	ENSG00000265316.1	+	antisense	KNOWN	RP11-286N3.1	1	4	-0.238362
chr18	5567130	5570942	5569036	ENSG00000264000.1	+	antisense	KNOWN	RP11-286N3.2	1	3	-0.156848
chr18	5661945	5662050	5661997	ENSG00000252432.1	-	miRNA	NOVEL	AP001032.1	1	1	-0.375614
chr18	5748819	5876328	5812573	ENSG00000261738.6	+	lincRNA	KNOWN	MIR3976HG	3	5	-0.305739
chr18	5840695	5840833	5840764	ENSG00000272380.1	+	miRNA	KNOWN	MIR3976	1	1	-0.523667
chr18	5882072	5895955	5889013	ENSG00000206432.4	-	protein_coding	KNOWN	TMEM200C	2	3	-0.167507
chr18	5887487	5909122	5898304	ENSG00000264449.5	+	antisense	KNOWN	RP11-945C19.4	3	3	0.003021
chr18	5954706	6415237	6184971	ENSG00000154655.14	-	protein_coding	KNOWN	L3MBTL4	9	20	-0.373603
chr18	5956101	5960785	5958443	ENSG00000265487.1	+	antisense	KNOWN	RP11-793A3.1	1	2	-0.330699
chr18	6017723	6017839	6017781	ENSG00000200637.1	-	snRNA	KNOWN	RNU5F-3P	1	1	-0.147474
chr18	6025091	6082455	6053773	ENSG00000266846.1	+	antisense	KNOWN	RP11-793A3.2	1	4	-0.383452
chr18	6256747	6260934	6258840	ENSG00000264707.1	+	lincRNA	KNOWN	L3MBTL4-AS1	1	3	-0.421536
chr18	6394847	6398020	6396433	ENSG00000279885.1	-	TEC	KNOWN	RP11-637N19.1	1	1	-0.249565
chr18	6454962	6455068	6455015	ENSG00000199272.1	+	snRNA	KNOWN	RNU6-349P	1	1	-0.482846
chr18	6462144	6463015	6462579	ENSG00000235552.4	-	transcribed_processed_pseudogene	KNOWN	RPL6P27	2	2	-0.482846
chr18	6493420	6495668	6494544	ENSG00000266065.1	+	lincRNA	KNOWN	CTD-2124B20.2	1	2	-0.337692
chr18	6511416	6590653	6551034	ENSG00000265944.1	+	lincRNA	KNOWN	LINC01387	1	6	-0.379351
chr18	6557822	6558654	6558238	ENSG00000265174.1	+	sense_intronic	KNOWN	CTD-2124B20.3	1	2	-0.356061
chr18	6601540	6601836	6601688	ENSG00000243591.3	+	misc_RNA	KNOWN	RN7SL282P	1	1	-0.351615
chr18	6641971	6642478	6642224	ENSG00000261627.1	-	lincRNA	KNOWN	RP11-91I8.1	1	1	-0.348581
chr18	6727053	6728981	6728017	ENSG00000279479.1	+	TEC	KNOWN	RP11-91I8.2	1	1	-0.166160
chr18	6728821	6729862	6729341	ENSG00000266441.1	-	antisense	KNOWN	RP11-91I8.3	1	2	-0.166160
chr18	6729718	6915716	6822717	ENSG00000088756.12	+	protein_coding	KNOWN	ARHGAP28	15	18	-0.339048
chr18	6873399	6875024	6874211	ENSG00000263797.1	-	antisense	KNOWN	RP11-146G7.2	1	2	-0.344960
chr18	6919496	6929966	6924731	ENSG00000265933.5	-	lincRNA	KNOWN	LINC00668	8	7	-0.472622
chr18	6926944	6928210	6927577	ENSG00000264127.1	+	processed_pseudogene	KNOWN	SCML2P1	1	2	-0.472622
chr18	6936912	6937020	6936966	ENSG00000251897.1	-	snRNA	KNOWN	RNU6-916P	1	1	-0.186473
chr18	6941744	7117814	7029779	ENSG00000101680.13	-	protein_coding	KNOWN	LAMA1	8	63	-0.193273
chr18	6954677	6957419	6956048	ENSG00000265069.1	+	antisense	KNOWN	RP11-781P6.1	1	2	0.147335
chr18	7076817	7080123	7078470	ENSG00000264475.1	+	antisense	KNOWN	RP11-76K13.3	1	3	-0.344107
chr18	7134931	7135819	7135375	ENSG00000263716.1	+	processed_pseudogene	KNOWN	SLC25A51P2	1	1	-0.315814
chr18	7231125	7232047	7231586	ENSG00000206422.2	+	protein_coding	KNOWN	LRRC30	1	1	-0.239214
chr18	7301020	7301153	7301086	ENSG00000212626.1	-	snoRNA	NOVEL	SNORA48	1	1	-0.278191
chr18	7566782	8406861	7986821	ENSG00000173482.16	+	protein_coding	KNOWN	PTPRM	15	33	-0.056354
chr18	7738111	7738225	7738168	ENSG00000221631.1	-	miRNA	NOVEL	AP000897.1	1	1	0.037884
chr18	7741310	7754831	7748070	ENSG00000266767.1	-	antisense	KNOWN	RP11-678G15.2	2	4	0.008944
chr18	7814118	7815730	7814924	ENSG00000264596.1	+	sense_intronic	KNOWN	RP11-678G15.1	1	1	-0.096770
chr18	7840937	7841060	7840998	ENSG00000263827.1	+	miRNA	NOVEL	AP005118.1	1	1	-0.231750
chr18	7995570	7995785	7995677	ENSG00000199856.2	+	snoRNA	NOVEL	U3	1	1	-0.028302
chr18	8154558	8155070	8154814	ENSG00000273368.1	+	sense_intronic	KNOWN	RP11-376P6.3	1	1	-0.243943
chr18	8227103	8227185	8227144	ENSG00000212067.1	-	miRNA	NOVEL	AP005227.1	1	1	-0.127789
chr18	8360820	8367034	8363927	ENSG00000266149.1	-	antisense	KNOWN	RP11-789C17.3	1	4	0.147948
chr18	8402847	8405161	8404004	ENSG00000265413.1	+	sense_intronic	KNOWN	RP11-789C17.1	1	1	0.076562
chr18	8406761	8406953	8406857	ENSG00000263970.1	-	antisense	KNOWN	RP11-789C17.5	1	1	0.076562
chr18	8412129	8414304	8413216	ENSG00000266613.1	+	processed_pseudogene	KNOWN	RFWD2P1	1	1	-0.252967
chr18	8471831	8472128	8471979	ENSG00000242985.3	+	misc_RNA	KNOWN	RN7SL50P	1	1	0.206391
chr18	8486997	8513849	8500423	ENSG00000229442.2	+	unitary_pseudogene	KNOWN	THEMIS3P	1	3	-0.074405
chr18	8545635	8546817	8546226	ENSG00000225212.4	+	processed_pseudogene	KNOWN	AKR1B1P6	1	2	-0.166160
chr18	8609445	8639381	8624413	ENSG00000206418.3	+	protein_coding	KNOWN	RAB12	2	6	0.075426
chr18	8635179	8636347	8635763	ENSG00000266708.1	-	antisense	KNOWN	RP11-661O13.1	1	2	0.083530
chr18	8688022	8688410	8688216	ENSG00000263935.1	-	processed_pseudogene	KNOWN	TOMM20P3	1	1	0.275438
chr18	8695856	8707621	8701738	ENSG00000265962.1	-	antisense	KNOWN	GACAT2	1	2	0.266388
chr18	8705661	8832778	8769219	ENSG00000168502.17	+	protein_coding	KNOWN	MTCL1	16	17	0.488188
chr18	8720034	8720132	8720083	ENSG00000252319.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.470503
chr18	8801656	8802305	8801980	ENSG00000272788.1	+	sense_intronic	KNOWN	RP11-674N23.4	1	1	0.538913
chr18	9020029	9020764	9020396	ENSG00000242058.2	+	processed_pseudogene	KNOWN	RPS4XP19	1	1	0.374027
chr18	9102630	9134345	9118487	ENSG00000178127.12	+	protein_coding	KNOWN	NDUFV2	9	9	-0.023910
chr18	9102736	9254346	9178541	ENSG00000265257.5	+	processed_transcript	KNOWN	RP11-21J18.1	2	9	-0.098749
chr18	9112404	9115877	9114140	ENSG00000263847.1	-	antisense	KNOWN	RP11-143J12.3	1	2	-0.075118
chr18	9121265	9136645	9128955	ENSG00000266053.2	-	antisense	KNOWN	NDUFV2-AS1	3	4	0.022843
chr18	9136228	9285985	9211106	ENSG00000101745.15	+	protein_coding	KNOWN	ANKRD12	10	13	-0.115883
chr18	9249649	9249746	9249697	ENSG00000200883.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.054272
chr18	9250110	9250211	9250160	ENSG00000207092.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.284729
chr18	9259388	9260390	9259889	ENSG00000273284.1	+	sense_intronic	KNOWN	RP11-888D10.4	1	1	-0.284729
chr18	9315194	9334441	9324817	ENSG00000264964.1	-	lincRNA	KNOWN	RP11-888D10.3	1	3	0.082501
chr18	9334767	9402420	9368593	ENSG00000128791.11	+	protein_coding	KNOWN	TWSG1	3	7	0.150118
chr18	9473421	9474006	9473713	ENSG00000273335.1	-	lincRNA	KNOWN	RP11-61L19.2	1	1	0.382384
chr18	9475009	9538116	9506562	ENSG00000017797.11	+	protein_coding	KNOWN	RALBP1	5	10	0.174949
chr18	9506242	9509726	9507984	ENSG00000266805.1	+	sense_intronic	KNOWN	RP11-61L19.1	1	1	0.163693
chr18	9518119	9518260	9518189	ENSG00000251994.1	-	snRNA	KNOWN	RNU2-27P	1	1	-0.048489
chr18	9519449	9520199	9519824	ENSG00000273352.1	+	sense_intronic	KNOWN	RP11-61L19.3	1	1	-0.048489
chr18	9546791	9615240	9581015	ENSG00000154845.15	-	protein_coding	KNOWN	PPP4R1	29	20	0.036759
chr18	9587386	9590182	9588784	ENSG00000266541.1	+	antisense	KNOWN	RP11-881L2.1	1	2	-0.269008
chr18	9615264	9619363	9617313	ENSG00000263627.1	+	lincRNA	KNOWN	PPP4R1-AS1	1	3	0.264173
chr18	9617964	9618072	9618018	ENSG00000212572.1	-	snRNA	KNOWN	RNU6-903P	1	1	0.264173
chr18	9678248	9679493	9678870	ENSG00000264644.1	-	processed_pseudogene	KNOWN	KRT18P8	1	1	0.077119
chr18	9708165	9862551	9785358	ENSG00000168461.12	+	protein_coding	KNOWN	RAB31	12	7	0.329589
chr18	9734882	9735602	9735242	ENSG00000266891.1	-	processed_pseudogene	KNOWN	RP11-692N5.2	1	2	0.300435
chr18	9785108	9787805	9786456	ENSG00000266127.1	+	processed_pseudogene	KNOWN	ZNF415P1	1	2	0.338152
chr18	9830330	9830627	9830478	ENSG00000242651.3	-	misc_RNA	KNOWN	RN7SL862P	1	1	0.277024
chr18	9844717	9844846	9844781	ENSG00000252680.1	-	rRNA	KNOWN	RNA5SP449	1	1	0.277024
chr18	9880580	9880886	9880733	ENSG00000265564.1	-	processed_pseudogene	KNOWN	PIGPP4	1	1	0.294932
chr18	9885726	9889275	9887500	ENSG00000168454.11	+	protein_coding	KNOWN	TXNDC2	6	4	0.294932
chr18	9912316	9912849	9912582	ENSG00000272799.1	-	lincRNA	KNOWN	RP11-474N24.6	1	1	0.280437
chr18	9914002	9960021	9937011	ENSG00000101558.13	+	protein_coding	KNOWN	VAPA	9	7	0.106689
chr18	9923920	9924021	9923970	ENSG00000223138.1	+	rRNA	KNOWN	RNA5SP450	1	1	0.280437
chr18	10005100	10005197	10005148	ENSG00000263630.1	-	miRNA	NOVEL	AP005271.1	1	1	0.053518
chr18	10125340	10144406	10134873	ENSG00000265554.1	+	lincRNA	KNOWN	RP11-419J16.1	1	2	0.388944
chr18	10323132	10372380	10347756	ENSG00000264876.1	-	lincRNA	KNOWN	RP11-138E9.2	1	6	0.252530
chr18	10375103	10378114	10376608	ENSG00000266102.1	+	lincRNA	KNOWN	RP11-243E13.2	1	2	0.112076
chr18	10405133	10414515	10409824	ENSG00000260913.1	-	lincRNA	KNOWN	LINC01254	2	3	0.031934
chr18	10454628	10489948	10472288	ENSG00000154856.12	+	protein_coding	KNOWN	APCDD1	6	5	0.200505
chr18	10525905	10552761	10539333	ENSG00000134265.12	+	protein_coding	KNOWN	NAPG	7	12	-0.043031
chr18	10594590	10604798	10599694	ENSG00000265728.1	+	lincRNA	KNOWN	RP11-883A18.3	1	5	-0.030492
chr18	10612304	10626353	10619328	ENSG00000266604.1	-	lincRNA	KNOWN	RP11-856M7.6	2	3	-0.045512
chr18	10622123	10622267	10622195	ENSG00000264503.1	-	processed_pseudogene	KNOWN	RP11-856M7.7	1	1	-0.045512
chr18	10623876	10624305	10624090	ENSG00000264311.1	-	processed_pseudogene	KNOWN	CCDC58P1	1	1	-0.045512
chr18	10627646	10628846	10628246	ENSG00000264072.1	-	lincRNA	KNOWN	RP11-856M7.4	1	2	-0.045512
chr18	10632238	10632396	10632317	ENSG00000266470.1	+	unprocessed_pseudogene	KNOWN	RP11-856M7.8	1	1	-0.365690
chr18	10636670	10637399	10637034	ENSG00000265038.1	+	processed_pseudogene	KNOWN	PMM2P1	1	1	-0.365690
chr18	10661933	10666887	10664410	ENSG00000260779.1	+	antisense	KNOWN	RP11-856M7.1	1	3	-0.248084
chr18	10666483	11148762	10907622	ENSG00000154864.11	-	protein_coding	KNOWN	PIEZO2	14	54	-0.231725
chr18	10704297	10709599	10706948	ENSG00000264843.1	+	antisense	KNOWN	RP11-856M7.2	1	3	-0.521399
chr18	10724619	10728539	10726579	ENSG00000264714.1	+	transcribed_processed_pseudogene	KNOWN	RP11-21G15.1	2	2	-0.228097
chr18	10759584	10759649	10759616	ENSG00000274838.1	-	miRNA	KNOWN	MIR6788	1	1	-0.145047
chr18	10893617	10908783	10901200	ENSG00000263952.5	+	antisense	KNOWN	RP11-513M1.1	2	2	-0.308249
chr18	11326270	11328832	11327551	ENSG00000263682.1	+	unprocessed_pseudogene	KNOWN	RP11-93H10.1	1	3	-0.045512
chr18	11366913	11378409	11372661	ENSG00000267051.1	-	lincRNA	KNOWN	RP11-128P17.2	1	3	-0.195221
chr18	11390033	11390729	11390381	ENSG00000273119.1	-	lincRNA	KNOWN	RP11-128P17.4	1	1	-0.049481
chr18	11447756	11489369	11468562	ENSG00000267564.1	-	lincRNA	KNOWN	RP11-128P17.3	1	2	-0.249662
chr18	11454478	11465996	11460237	ENSG00000267425.1	+	lincRNA	KNOWN	RP11-128P17.1	1	4	-0.326073
chr18	11488570	11506983	11497776	ENSG00000267252.5	+	lincRNA	KNOWN	LINC01255	6	5	-0.023147
chr18	11552366	11552847	11552606	ENSG00000267371.1	+	processed_pseudogene	KNOWN	RP11-712C7.2	1	1	-0.369456
chr18	11609596	11610612	11610104	ENSG00000236396.6	+	processed_pseudogene	KNOWN	SLC35G4	1	1	-0.142615
chr18	11618208	11618315	11618261	ENSG00000267794.1	+	processed_pseudogene	KNOWN	RP11-677O4.5	1	1	-0.126009
chr18	11619509	11639699	11629604	ENSG00000257513.7	-	transcribed_unprocessed_pseudogene	KNOWN	NPIPB1P	2	8	0.082816
chr18	11620717	11621158	11620937	ENSG00000267143.1	-	lincRNA	KNOWN	RP11-677O4.6	1	2	-0.126009
chr18	11644336	11644824	11644580	ENSG00000267773.1	+	processed_pseudogene	KNOWN	RP11-677O4.4	1	1	0.308648
chr18	11666456	11670165	11668310	ENSG00000260759.1	-	lincRNA	KNOWN	RP11-677O4.2	1	1	0.062690
chr18	11688956	11885685	11787320	ENSG00000141404.15	+	protein_coding	KNOWN	GNAL	10	13	-0.119898
chr18	11745626	11747581	11746603	ENSG00000267333.1	+	processed_pseudogene	KNOWN	ASNSP6	1	2	-0.143753
chr18	11810406	11811484	11810945	ENSG00000267455.1	-	antisense	KNOWN	RP11-78A19.2	1	2	-0.136277
chr18	11851396	11854449	11852922	ENSG00000255112.2	+	protein_coding	KNOWN	CHMP1B	2	2	-0.008120
chr18	11851414	11852751	11852082	ENSG00000267165.1	-	antisense	KNOWN	RP11-78A19.3	1	2	-0.008120
chr18	11857155	11857554	11857354	ENSG00000272703.1	-	antisense	KNOWN	RP11-78A19.4	1	1	-0.008120
chr18	11882622	11909223	11895922	ENSG00000154889.16	-	protein_coding	KNOWN	MPPE1	30	13	0.260076
chr18	11908712	11909223	11908967	ENSG00000273141.1	+	antisense	KNOWN	RP11-820I16.4	1	1	0.246569
chr18	11910634	11914344	11912489	ENSG00000267079.1	-	lincRNA	KNOWN	RP11-820I16.1	1	2	-0.037291
chr18	11928838	11929476	11929157	ENSG00000267661.1	+	processed_pseudogene	KNOWN	RP11-820I16.2	1	2	-0.037291
chr18	11981025	12030883	12005954	ENSG00000141401.11	+	protein_coding	KNOWN	IMPA2	12	8	0.326441
chr18	11993988	11994938	11994463	ENSG00000266955.1	-	antisense	KNOWN	RP11-820I16.3	1	2	0.565923
chr18	12031178	12032181	12031679	ENSG00000267480.1	-	antisense	KNOWN	RP11-703I16.1	1	2	0.256379
chr18	12040101	12040300	12040200	ENSG00000266995.1	-	processed_pseudogene	KNOWN	RP11-703I16.3	1	1	0.256379
chr18	12050309	12050672	12050490	ENSG00000267292.1	-	processed_pseudogene	KNOWN	RP11-703I16.2	1	1	0.130881
chr18	12056676	12057822	12057249	ENSG00000212712.2	-	processed_pseudogene	KNOWN	AP002414.1	1	1	0.130881
chr18	12067173	12068417	12067795	ENSG00000267533.1	-	processed_pseudogene	KNOWN	RP11-815J4.7	1	2	0.130881
chr18	12073232	12076654	12074943	ENSG00000256616.3	-	transcribed_processed_pseudogene	KNOWN	RP11-815J4.6	2	1	0.049928
chr18	12081540	12085267	12083403	ENSG00000267722.1	+	lincRNA	KNOWN	RP11-815J4.1	1	3	0.049928
chr18	12091674	12093141	12092407	ENSG00000267478.1	-	processed_pseudogene	KNOWN	RP11-815J4.5	1	1	0.452582
chr18	12093853	12129749	12111801	ENSG00000181626.11	+	protein_coding	KNOWN	ANKRD62	2	14	-0.117963
chr18	12098427	12098532	12098479	ENSG00000200827.1	+	snRNA	KNOWN	RNU6-324P	1	1	0.452582
chr18	12101997	12102470	12102233	ENSG00000267162.1	-	processed_pseudogene	KNOWN	SDHDP1	1	1	0.452582
chr18	12192203	12192934	12192568	ENSG00000267116.1	-	processed_pseudogene	KNOWN	RP11-64C12.7	1	1	-0.231705
chr18	12199345	12200089	12199717	ENSG00000279285.1	+	TEC	KNOWN	RP11-64C12.5	1	1	-0.231705
chr18	12200779	12201979	12201379	ENSG00000267643.1	+	lincRNA	KNOWN	RP11-64C12.4	1	2	-0.231705
chr18	12201982	12223539	12212760	ENSG00000267733.5	+	transcribed_processed_pseudogene	KNOWN	RP11-64C12.3	5	4	-0.254132
chr18	12211378	12211807	12211592	ENSG00000267076.1	+	processed_pseudogene	KNOWN	CCDC58P3	1	1	-0.267411
chr18	12230411	12231573	12230992	ENSG00000267247.1	-	lincRNA	KNOWN	RP11-64C12.6	1	2	-0.088129
chr18	12246589	12247055	12246822	ENSG00000267663.1	+	processed_pseudogene	KNOWN	RP11-64C12.9	1	1	-0.088129
chr18	12254319	12277595	12265957	ENSG00000176194.17	+	protein_coding	KNOWN	CIDEA	4	6	0.017081
chr18	12279427	12282739	12281083	ENSG00000280302.1	+	TEC	KNOWN	RP11-64C12.1	1	1	0.108202
chr18	12288308	12291488	12289898	ENSG00000267069.1	+	lincRNA	KNOWN	RP11-64C12.8	1	2	0.211492
chr18	12304091	12304194	12304142	ENSG00000199702.1	-	snRNA	KNOWN	RNU6-170P	1	1	0.328795
chr18	12307669	12344320	12325994	ENSG00000176014.12	+	protein_coding	KNOWN	TUBB6	14	5	0.265688
chr18	12328944	12377314	12353129	ENSG00000141385.9	-	protein_coding	KNOWN	AFG3L2	4	17	0.188745
chr18	12400412	12400473	12400442	ENSG00000251937.1	+	snRNA	KNOWN	RNU7-129P	1	1	0.382288
chr18	12407896	12432238	12420067	ENSG00000141391.13	+	protein_coding	KNOWN	PRELID3A	9	7	0.202127
chr18	12432897	12437635	12435266	ENSG00000267108.1	+	lincRNA	KNOWN	RP11-861E21.1	1	2	0.728716
chr18	12438890	12448205	12443547	ENSG00000267199.1	+	antisense	KNOWN	RP11-861E21.2	3	3	0.728716
chr18	12446512	12658134	12552323	ENSG00000134278.14	-	protein_coding	KNOWN	SPIRE1	14	17	0.227081
chr18	12450447	12451042	12450744	ENSG00000267515.1	+	processed_pseudogene	KNOWN	RP11-861E21.3	1	1	0.487221
chr18	12658043	12725740	12691891	ENSG00000128789.20	+	protein_coding	KNOWN	PSMG2	10	7	0.182443
chr18	12661833	12702777	12682305	ENSG00000101624.10	-	protein_coding	KNOWN	CEP76	12	13	0.241817
chr18	12670426	12671145	12670785	ENSG00000267249.1	-	sense_intronic	KNOWN	RP11-973H7.3	1	1	0.231999
chr18	12738965	12750068	12744516	ENSG00000266961.1	-	lincRNA	KNOWN	RP11-973H7.5	1	2	0.396468
chr18	12739490	12749421	12744455	ENSG00000267654.1	-	lincRNA	KNOWN	RP11-973H7.4	1	2	0.396846
chr18	12760717	12760818	12760767	ENSG00000201466.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.336096
chr18	12774651	12775923	12775287	ENSG00000260302.1	-	lincRNA	KNOWN	RP11-973H7.1	1	1	0.318763
chr18	12785478	12929643	12857560	ENSG00000175354.18	-	protein_coding	KNOWN	PTPN2	15	11	0.084423
chr18	12911186	12912023	12911604	ENSG00000267570.1	+	processed_pseudogene	KNOWN	STK25P1	1	1	0.199476
chr18	12912844	12913906	12913375	ENSG00000267336.1	+	processed_pseudogene	KNOWN	EIF4A2P1	1	1	0.199476
chr18	12947133	12987536	12967334	ENSG00000085415.15	+	protein_coding	KNOWN	SEH1L	10	9	0.312569
chr18	12984694	12991173	12987933	ENSG00000266969.1	-	antisense	KNOWN	RP11-773H22.4	1	3	0.226809
chr18	12991362	13125052	13058207	ENSG00000101639.18	+	protein_coding	KNOWN	CEP192	15	45	0.044033
chr18	13139780	13140489	13140134	ENSG00000267656.1	-	processed_pseudogene	KNOWN	RP11-807E13.3	1	1	0.112951
chr18	13151637	13152689	13152163	ENSG00000267032.1	-	processed_pseudogene	KNOWN	RP11-807E13.2	1	1	-0.139334
chr18	13183402	13185617	13184509	ENSG00000267286.1	-	lincRNA	KNOWN	RP11-794M8.2	1	2	-0.218937
chr18	13195652	13195703	13195677	ENSG00000278652.1	-	miRNA	NOVEL	AP001198.1	1	1	-0.228143
chr18	13203774	13216367	13210070	ENSG00000267239.1	-	antisense	KNOWN	RP11-794M8.1	2	2	-0.061979
chr18	13217498	13652755	13435126	ENSG00000168675.18	+	protein_coding	KNOWN	LDLRAD4	19	6	-0.041600
chr18	13234945	13236470	13235707	ENSG00000267177.1	-	antisense	KNOWN	RP11-756J15.3	1	2	0.084338
chr18	13239543	13242076	13240809	ENSG00000279020.1	+	TEC	KNOWN	C18orf15	1	1	0.084338
chr18	13279415	13280110	13279762	ENSG00000279275.1	-	TEC	KNOWN	RP11-756J15.2	1	1	0.266596
chr18	13362203	13366243	13364223	ENSG00000267393.1	-	antisense	KNOWN	RP11-691H4.3	1	2	-0.174288
chr18	13419421	13427480	13423450	ENSG00000267690.1	-	antisense	KNOWN	LDLRAD4-AS1	1	4	-0.212402
chr18	13459947	13460026	13459986	ENSG00000266146.1	+	miRNA	KNOWN	MIR5190	1	1	0.123186
chr18	13461020	13470823	13465921	ENSG00000267694.1	-	antisense	KNOWN	RP11-691H4.4	1	4	0.107571
chr18	13471012	13472709	13471860	ENSG00000267529.3	-	processed_transcript	KNOWN	RP11-53B2.1	2	2	-0.062585
chr18	13486462	13490676	13488569	ENSG00000267702.1	+	sense_intronic	KNOWN	RP11-53B2.2	1	1	-0.076471
chr18	13500641	13501289	13500965	ENSG00000267366.1	-	antisense	KNOWN	RP11-53B2.5	1	2	-0.149016
chr18	13514520	13522888	13518704	ENSG00000267136.1	-	antisense	KNOWN	RP11-53B2.3	1	2	-0.030865
chr18	13526078	13526688	13526383	ENSG00000272746.1	+	sense_intronic	KNOWN	RP11-53B2.6	1	1	-0.030865
chr18	13561399	13565035	13563217	ENSG00000267503.1	-	antisense	KNOWN	RP11-53B2.4	1	3	0.122526
chr18	13611114	13611200	13611157	ENSG00000263527.1	+	miRNA	KNOWN	MIR4526	1	1	-0.186473
chr18	13644815	13645685	13645250	ENSG00000266954.1	-	antisense	KNOWN	RP11-701H16.4	1	2	0.091992
chr18	13663347	13726663	13695005	ENSG00000177150.12	-	protein_coding	KNOWN	FAM210A	7	5	0.012838
chr18	13710249	13710484	13710366	ENSG00000279962.1	-	TEC	KNOWN	RP11-720L3.1	1	1	-0.187582
chr18	13715102	13715368	13715235	ENSG00000242707.3	-	misc_RNA	KNOWN	RN7SL362P	1	1	-0.187582
chr18	13726660	13764558	13745609	ENSG00000101654.17	+	protein_coding	KNOWN	RNMT	10	12	-0.158668
chr18	13823915	13823986	13823950	ENSG00000211528.2	-	miRNA	NOVEL	AP001525.1	1	1	-0.427876
chr18	13824155	13826743	13825449	ENSG00000176136.5	+	protein_coding	KNOWN	MC5R	2	2	-0.427876
chr18	13882044	13915707	13898875	ENSG00000185231.4	-	protein_coding	KNOWN	MC2R	2	2	-0.360749
chr18	13919603	13919923	13919763	ENSG00000243779.1	-	processed_pseudogene	KNOWN	RP11-681N23.1	1	1	-0.628724
chr18	14010054	14010917	14010485	ENSG00000279352.1	+	TEC	KNOWN	RP11-411B10.7	2	1	-0.391941
chr18	14053951	14054761	14054356	ENSG00000270469.1	+	processed_pseudogene	KNOWN	RP11-411B10.8	1	1	-0.447167
chr18	14057457	14132490	14094973	ENSG00000175322.11	-	protein_coding	KNOWN	ZNF519	13	6	-0.321593
chr18	14074912	14075741	14075326	ENSG00000267756.1	-	unprocessed_pseudogene	KNOWN	RP11-411B10.4	1	1	-0.145337
chr18	14089935	14091019	14090477	ENSG00000267150.1	+	antisense	KNOWN	RP11-411B10.2	1	1	-0.339979
chr18	14104542	14105226	14104884	ENSG00000267356.1	+	antisense	KNOWN	RP11-411B10.3	1	2	-0.352192
chr18	14118594	14118702	14118648	ENSG00000252234.1	-	miRNA	NOVEL	AC006557.1	1	1	-0.412481
chr18	14137710	14139272	14138491	ENSG00000267704.1	+	processed_pseudogene	KNOWN	FRG2LP	1	1	-0.129087
chr18	14143596	14151139	14147367	ENSG00000267324.1	-	processed_pseudogene	KNOWN	RP11-411B10.5	1	11	-0.104085
chr18	14153001	14157342	14155171	ENSG00000175319.3	-	processed_pseudogene	KNOWN	NF1P5	1	4	0.036344
chr18	14179097	14234797	14206947	ENSG00000186481.15	+	transcribed_unprocessed_pseudogene	KNOWN	ANKRD20A5P	8	16	-0.385938
chr18	14190700	14190806	14190753	ENSG00000212329.1	+	snRNA	KNOWN	RNU6-316P	1	1	-0.580204
chr18	14222008	14222331	14222169	ENSG00000266145.1	+	processed_pseudogene	KNOWN	RHOT1P1	1	1	-0.453832
chr18	14244625	14252140	14248382	ENSG00000264222.1	+	lincRNA	KNOWN	RP11-757O6.1	1	5	-0.488909
chr18	14253548	14254075	14253811	ENSG00000274214.1	+	processed_pseudogene	KNOWN	RP11-757O6.6	1	1	-0.487165
chr18	14337423	14342525	14339974	ENSG00000265787.1	+	lincRNA	KNOWN	CYP4F35P	2	4	-0.229936
chr18	14346214	14346923	14346568	ENSG00000277743.1	-	processed_pseudogene	KNOWN	RP11-757O6.7	1	1	-0.229936
chr18	14361434	14361943	14361688	ENSG00000265437.1	-	processed_pseudogene	KNOWN	RP11-757O6.4	1	1	-0.406814
chr18	14377546	14378757	14378151	ENSG00000187589.8	-	processed_pseudogene	KNOWN	TERF1P2	1	1	-0.130401
chr18	14391913	14393909	14392911	ENSG00000265296.1	-	processed_pseudogene	KNOWN	FEM1AP2	1	1	-0.344525
chr18	14430629	14430714	14430671	ENSG00000274057.1	-	miRNA	NOVEL	AP006261.1	1	1	-0.243799
chr18	14450216	14450883	14450549	ENSG00000266605.1	-	processed_pseudogene	KNOWN	LONRF2P1	1	1	0.005056
chr18	14477955	14499278	14488616	ENSG00000265766.2	-	lincRNA	KNOWN	CXADRP3	2	4	-0.255162
chr18	14485806	14487501	14486653	ENSG00000266242.1	+	processed_pseudogene	KNOWN	GRAMD4P7	1	2	-0.288151
chr18	14507339	14543585	14525462	ENSG00000183206.16	-	protein_coding	KNOWN	POTEC	5	13	-0.426463
chr18	14531676	14531782	14531729	ENSG00000200132.1	-	snRNA	KNOWN	RNU6-1021P	1	1	-0.438523
chr18	14570844	14571788	14571316	ENSG00000265340.1	+	unprocessed_pseudogene	KNOWN	OR4K7P	1	1	-1.048186
chr18	14613137	14614184	14613660	ENSG00000266693.1	+	unprocessed_pseudogene	KNOWN	OR4K8P	1	1	-0.553092
chr18	14629832	14632806	14631319	ENSG00000264570.1	-	processed_pseudogene	KNOWN	SNX19P3	1	1	-0.211712
chr18	14680604	14681106	14680855	ENSG00000273732.1	-	unprocessed_pseudogene	KNOWN	VN1R74P	1	1	-0.669848
chr18	14695422	14706597	14701009	ENSG00000276318.1	+	unprocessed_pseudogene	KNOWN	GTF2IP8	1	5	-0.390609
chr18	14728272	14852738	14790505	ENSG00000180777.13	+	protein_coding	KNOWN	ANKRD30B	4	36	-0.542088
chr18	14759188	14759294	14759241	ENSG00000200645.1	+	snRNA	KNOWN	RNU6-1210P	1	1	-0.549215
chr18	14771249	14771327	14771288	ENSG00000265481.1	+	miRNA	NOVEL	AP006564.1	1	1	-0.488552
chr18	14816151	14825249	14820700	ENSG00000265737.1	-	antisense	KNOWN	RP11-1157N2__B.2	1	2	-0.550456
chr18	14830166	14830242	14830204	ENSG00000265499.1	+	miRNA	KNOWN	MIR3156-2	1	1	-0.479915
chr18	14877611	14884052	14880831	ENSG00000265786.1	+	lincRNA	KNOWN	RP11-527H14.6	1	4	-0.173742
chr18	14888709	14890086	14889397	ENSG00000264061.1	-	unprocessed_pseudogene	KNOWN	FGF7P1	1	2	-0.198839
chr18	14903580	14915628	14909604	ENSG00000263618.5	+	lincRNA	KNOWN	RP11-527H14.4	3	3	-0.372791
chr18	14946267	14973770	14960018	ENSG00000266554.1	+	lincRNA	KNOWN	LINC01443	2	4	0.006668
chr18	14969001	14970468	14969734	ENSG00000264301.1	-	lincRNA	KNOWN	LINC01444	2	2	0.066508
chr18	14978739	14979839	14979289	ENSG00000263821.1	+	lincRNA	KNOWN	RP11-527H14.1	1	1	0.326003
chr18	14990707	14993235	14991971	ENSG00000279042.1	-	TEC	KNOWN	RP11-805F19.3	1	1	-0.089615
chr18	15003975	15006352	15005163	ENSG00000266522.1	-	unprocessed_pseudogene	KNOWN	RP11-805F19.4	1	4	-0.089615
chr18	15057125	15066579	15061852	ENSG00000278923.1	-	protein_coding	KNOWN	AP005242.1	1	2	-0.699691
chr18	15075445	15122767	15099106	ENSG00000263635.1	+	lincRNA	KNOWN	RP11-805F19.2	1	3	-0.816605
chr18	15159724	15164467	15162095	ENSG00000264880.1	-	lincRNA	KNOWN	RP11-805F19.1	1	2	-0.952402
chr18	15196999	15197775	15197387	ENSG00000265015.1	-	transcribed_processed_pseudogene	KNOWN	RP11-454P7.3	2	2	-0.598904
chr18	15247429	15247997	15247713	ENSG00000265631.1	-	processed_pseudogene	KNOWN	BNIP3P3	1	1	-0.252454
chr18	15254418	15271744	15263081	ENSG00000266818.1	+	unprocessed_pseudogene	KNOWN	RP11-454P7.1	1	3	-0.534608
chr18	15307663	15330282	15318972	ENSG00000215512.9	-	transcribed_unprocessed_pseudogene	KNOWN	AP005901.1	3	8	-0.579534
chr18	15320840	15320944	15320892	ENSG00000222087.1	-	snRNA	KNOWN	RNU6-721P	1	1	-0.587830
chr18	20946906	21111851	21029378	ENSG00000067900.7	-	protein_coding	KNOWN	ROCK1	7	34	-0.087215
chr18	21062383	21062473	21062428	ENSG00000216205.1	-	miRNA	NOVEL	AC036178.1	1	1	-0.060960
chr18	21119182	21119661	21119421	ENSG00000244527.1	-	processed_pseudogene	KNOWN	RP11-254G11.1	1	1	0.143217
chr18	21120404	21120506	21120455	ENSG00000251886.1	-	snRNA	KNOWN	RNU6-120P	1	1	0.143217
chr18	21182503	21183499	21183001	ENSG00000263748.1	-	processed_pseudogene	KNOWN	EXOGP1	1	1	-0.088580
chr18	21240675	21241371	21241023	ENSG00000265984.1	-	lincRNA	KNOWN	RP11-699A5.2	1	2	0.004044
chr18	21242242	21525417	21383829	ENSG00000141449.14	+	protein_coding	KNOWN	GREB1L	11	33	0.087695
chr18	21316878	21317795	21317336	ENSG00000265948.1	+	sense_intronic	KNOWN	RP11-296E23.2	1	2	0.059014
chr18	21380286	21451017	21415651	ENSG00000265751.1	-	antisense	KNOWN	RP11-296E23.1	1	4	0.071364
chr18	21450653	21450756	21450704	ENSG00000221139.1	-	snoRNA	NOVEL	SNORD23	1	1	0.175893
chr18	21529281	21600884	21565082	ENSG00000141446.10	-	protein_coding	KNOWN	ESCO1	4	13	0.154003
chr18	21612267	21633524	21622895	ENSG00000167088.10	+	protein_coding	KNOWN	SNRPD1	4	4	0.218242
chr18	21650897	21704805	21677851	ENSG00000158201.9	-	protein_coding	KNOWN	ABHD3	10	9	0.080994
chr18	21661787	21662395	21662091	ENSG00000264188.1	-	sense_intronic	KNOWN	RP11-13N13.5	1	2	-0.036523
chr18	21673628	21682561	21678094	ENSG00000265656.1	+	antisense	KNOWN	RP11-13N13.6	1	2	0.289224
chr18	21683510	21683597	21683553	ENSG00000221493.1	+	miRNA	KNOWN	MIR320C1	1	1	0.289224
chr18	21704957	21870957	21787957	ENSG00000101752.11	+	protein_coding	KNOWN	MIB1	4	21	-0.103749
chr18	21711950	21712119	21712034	ENSG00000252677.1	-	snoRNA	NOVEL	SNORA81	1	1	0.291929
chr18	21712017	21712119	21712068	ENSG00000281568.1	-	miRNA	NOVEL	AC106037.1	1	1	0.291929
chr18	21724119	21724229	21724174	ENSG00000200750.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.291929
chr18	21776878	21776977	21776927	ENSG00000264183.1	+	miRNA	NOVEL	AC091038.1	1	1	-0.149826
chr18	21793883	21794159	21794021	ENSG00000242971.3	+	misc_RNA	KNOWN	RN7SL233P	1	1	0.266490
chr18	21817624	21817828	21817726	ENSG00000199977.1	+	snoRNA	NOVEL	SNORA73	1	1	-0.325928
chr18	21825487	21831410	21828448	ENSG00000265142.6	-	antisense	KNOWN	MIR133A1HG	3	3	-0.381710
chr18	21825698	21825785	21825741	ENSG00000276792.1	-	miRNA	KNOWN	MIR133A1	1	1	-0.325928
chr18	21828996	21829106	21829051	ENSG00000278753.1	-	miRNA	KNOWN	MIR1-2	1	1	-0.325928
chr18	21854640	21854987	21854813	ENSG00000243303.1	-	processed_pseudogene	KNOWN	RP11-268I9.1	1	1	-0.435023
chr18	21871446	21893996	21882721	ENSG00000264149.1	-	lincRNA	KNOWN	RP11-268I9.3	1	2	-0.346366
chr18	21879801	21879904	21879852	ENSG00000252325.1	+	snRNA	KNOWN	RNU6-1038P	1	1	-0.393435
chr18	21914369	21914660	21914514	ENSG00000264289.1	-	processed_pseudogene	KNOWN	RP11-268I9.4	1	1	0.017138
chr18	21928985	21929094	21929039	ENSG00000222520.1	-	rRNA	KNOWN	RNA5SP451	1	1	0.017138
chr18	21981121	22051159	22016140	ENSG00000265758.1	+	lincRNA	KNOWN	RP11-595B24.1	3	4	0.149083
chr18	21999569	21999651	21999610	ENSG00000265568.1	+	miRNA	NOVEL	AC091043.1	1	1	0.240090
chr18	22088060	22098780	22093420	ENSG00000263588.1	+	lincRNA	KNOWN	RP11-595B24.2	1	2	0.070145
chr18	22130603	22130729	22130666	ENSG00000221363.1	-	snRNA	KNOWN	RNU6ATAC20P	1	1	-0.143896
chr18	22166898	22168968	22167933	ENSG00000266010.1	-	lincRNA	KNOWN	GATA6-AS1	4	4	0.206064
chr18	22169443	22202528	22185985	ENSG00000141448.8	+	protein_coding	KNOWN	GATA6	2	7	0.259418
chr18	22175465	22176662	22176063	ENSG00000264012.1	-	antisense	KNOWN	RP11-627G18.2	1	2	0.355026
chr18	22180112	22180218	22180165	ENSG00000201852.1	-	snRNA	KNOWN	RNU6-702P	1	1	0.355026
chr18	22200619	22205229	22202924	ENSG00000266283.1	-	antisense	KNOWN	RP11-627G18.1	1	2	0.109167
chr18	22213778	22228029	22220903	ENSG00000264825.1	+	lincRNA	KNOWN	RP11-627G18.4	1	2	-0.134436
chr18	22347846	22348252	22348049	ENSG00000273348.1	-	lincRNA	KNOWN	RP11-535A5.1	1	1	0.439375
chr18	22413601	22417915	22415758	ENSG00000212710.4	-	protein_coding	KNOWN	CTAGE1	2	1	0.223589
chr18	22418829	22419294	22419061	ENSG00000270855.1	-	processed_pseudogene	KNOWN	RP11-863N1.4	1	1	0.223589
chr18	22586465	22587227	22586846	ENSG00000239490.1	+	processed_pseudogene	KNOWN	RPS4XP18	1	1	0.109065
chr18	22647582	22647688	22647635	ENSG00000206827.1	+	snRNA	KNOWN	RNU6-1032P	1	1	0.128288
chr18	22699481	22933764	22816622	ENSG00000265943.1	-	antisense	KNOWN	RP11-739L10.1	1	4	-0.179668
chr18	22723491	22907721	22815606	ENSG00000266850.1	-	antisense	KNOWN	RP11-370A5.1	4	4	-0.224840
chr18	22798261	23026488	22912374	ENSG00000101773.16	+	protein_coding	KNOWN	RBBP8	16	19	-0.225371
chr18	22882825	22883357	22883091	ENSG00000273232.1	-	sense_intronic	KNOWN	RP11-370A5.2	1	1	-0.236631
chr18	22900486	22900995	22900740	ENSG00000265939.1	-	processed_pseudogene	KNOWN	UBE2CP2	1	1	-0.457924
chr18	22933349	22933438	22933393	ENSG00000264817.1	+	miRNA	KNOWN	MIR4741	1	1	-0.141498
chr18	23004564	23004862	23004713	ENSG00000242182.3	+	misc_RNA	KNOWN	RN7SL745P	1	1	0.003455
chr18	23024596	23024703	23024649	ENSG00000223023.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.283976
chr18	23134564	23260467	23197515	ENSG00000134508.12	+	protein_coding	KNOWN	CABLES1	10	10	0.506702
chr18	23136435	23136512	23136473	ENSG00000222999.1	-	miRNA	NOVEL	AC105247.1	1	1	0.280601
chr18	23197144	23437961	23317552	ENSG00000134490.13	-	protein_coding	KNOWN	TMEM241	17	16	0.376185
chr18	23257164	23260354	23258759	ENSG00000266495.1	-	antisense	KNOWN	RP11-17J14.2	1	2	0.621850
chr18	23452823	23486603	23469713	ENSG00000101782.14	+	protein_coding	KNOWN	RIOK3	11	13	0.189946
chr18	23456371	23456467	23456419	ENSG00000199357.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.284637
chr18	23485000	23485197	23485098	ENSG00000283084.1	+	processed_pseudogene	KNOWN	RP11-639E23.1	1	1	0.091992
chr18	23503470	23531807	23517638	ENSG00000141452.9	+	protein_coding	KNOWN	C18orf8	14	20	0.447149
chr18	23506184	23586898	23546541	ENSG00000141458.12	-	protein_coding	KNOWN	NPC1	14	25	0.310545
chr18	23582016	23582121	23582068	ENSG00000199366.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.239549
chr18	23598926	23662885	23630905	ENSG00000154065.16	-	protein_coding	KNOWN	ANKRD29	8	10	0.325791
chr18	23672253	23672748	23672500	ENSG00000267752.1	-	processed_pseudogene	KNOWN	RPS10P27	1	1	0.166760
chr18	23689443	23955066	23822254	ENSG00000053747.15	+	protein_coding	KNOWN	LAMA3	14	75	0.170401
chr18	23709825	23710287	23710056	ENSG00000267301.1	-	processed_pseudogene	KNOWN	RPL23AP77	1	1	0.111398
chr18	23894115	23894206	23894160	ENSG00000221389.1	-	miRNA	NOVEL	AC010754.1	1	1	-0.068899
chr18	23957754	23982556	23970155	ENSG00000265752.2	-	lincRNA	KNOWN	RP11-403A21.1	1	2	0.271994
chr18	23992773	24135610	24064191	ENSG00000168234.12	+	protein_coding	KNOWN	TTC39C	10	14	0.189767
chr18	23994213	24015339	24004776	ENSG00000264745.1	-	antisense	KNOWN	TTC39C-AS1	1	6	0.398842
chr18	24076794	24099320	24088057	ENSG00000265204.1	-	antisense	KNOWN	RP11-403A21.3	1	2	0.032426
chr18	24113637	24121003	24117320	ENSG00000264924.1	-	antisense	KNOWN	RP11-799B12.2	1	2	0.243235
chr18	24124170	24124285	24124227	ENSG00000206863.1	-	snRNA	KNOWN	RNU5A-6P	1	1	0.243235
chr18	24135468	24135829	24135648	ENSG00000279332.1	-	TEC	KNOWN	RP11-799B12.1	1	1	0.191002
chr18	24138956	24161603	24150279	ENSG00000154040.20	+	protein_coding	KNOWN	CABYR	19	6	0.174659
chr18	24159509	24162211	24160860	ENSG00000265750.1	-	lincRNA	KNOWN	RP11-799B12.4	1	3	0.159106
chr18	24162044	24397880	24279962	ENSG00000141447.16	-	protein_coding	KNOWN	OSBPL1A	16	28	-0.056550
chr18	24170505	24170623	24170564	ENSG00000199874.1	-	rRNA	KNOWN	RNA5SP452	1	1	0.133812
chr18	24179038	24179295	24179166	ENSG00000273524.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.133812
chr18	24218300	24218404	24218352	ENSG00000206766.1	+	snRNA	KNOWN	RNU6-435P	1	1	-0.166320
chr18	24321686	24321735	24321710	ENSG00000212051.1	+	miRNA	KNOWN	MIR320C2	1	1	-0.312157
chr18	24364787	24367984	24366385	ENSG00000264365.1	+	antisense	KNOWN	RP11-621L6.2	1	2	0.128750
chr18	24402153	24402714	24402433	ENSG00000273321.1	+	lincRNA	KNOWN	RP11-621L6.3	1	1	0.019641
chr18	24426616	24453535	24440075	ENSG00000154059.9	+	protein_coding	KNOWN	IMPACT	6	11	-0.063867
chr18	24429505	24429609	24429557	ENSG00000199636.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.253144
chr18	24435364	24439638	24437501	ENSG00000265094.1	+	sense_intronic	KNOWN	RP11-178F10.1	1	2	-0.029753
chr18	24460629	24479957	24470293	ENSG00000134489.6	+	protein_coding	KNOWN	HRH4	2	3	-0.157880
chr18	24489375	24491080	24490227	ENSG00000264695.1	+	lincRNA	KNOWN	RP11-178F10.2	1	2	-0.081566
chr18	24516883	24518006	24517444	ENSG00000266489.1	-	lincRNA	KNOWN	RP11-178F10.3	1	2	-0.148323
chr18	24522273	24522919	24522596	ENSG00000266181.1	-	processed_pseudogene	KNOWN	EIF4A3P1	1	1	-0.148323
chr18	24628182	24662198	24645190	ENSG00000265485.5	+	lincRNA	KNOWN	RP11-449D8.1	2	3	-0.221482
chr18	24673163	24674348	24673755	ENSG00000263553.1	+	lincRNA	KNOWN	RP11-449D8.2	1	2	-0.172603
chr18	24685772	24686351	24686061	ENSG00000266520.1	-	processed_pseudogene	KNOWN	RAC1P1	1	1	-0.172603
chr18	24689914	24690161	24690037	ENSG00000266809.1	-	processed_pseudogene	KNOWN	RP11-449D8.3	1	1	-0.459546
chr18	24725781	24929076	24827428	ENSG00000266573.5	+	lincRNA	KNOWN	RP11-449D8.5	3	4	-0.287530
chr18	24933487	24987682	24960584	ENSG00000264345.1	-	lincRNA	KNOWN	RP11-958F21.1	2	2	-0.287875
chr18	25016434	25017204	25016819	ENSG00000229248.1	-	processed_pseudogene	KNOWN	WBP2P1	1	1	-0.244190
chr18	25055600	25056760	25056180	ENSG00000265552.1	+	lincRNA	KNOWN	RP11-958F21.3	1	2	-0.174083
chr18	25061926	25352190	25207058	ENSG00000198795.10	-	protein_coding	KNOWN	ZNF521	14	9	-0.386381
chr18	25200976	25202837	25201906	ENSG00000279439.1	-	TEC	KNOWN	CTD-2576N18.1	1	1	-0.438523
chr18	25302126	25302960	25302543	ENSG00000264434.2	+	antisense	KNOWN	CTD-2006O16.2	1	2	-0.269408
chr18	25818234	25818532	25818383	ENSG00000242216.3	-	misc_RNA	KNOWN	RN7SL97P	1	1	-0.102920
chr18	25953216	25953468	25953342	ENSG00000264193.1	-	processed_pseudogene	KNOWN	RP11-737G21.1	1	1	-0.249045
chr18	26016253	26091217	26053735	ENSG00000141380.13	-	protein_coding	KNOWN	SS18	26	11	-0.321991
chr18	26098839	26099226	26099032	ENSG00000243925.1	+	processed_pseudogene	KNOWN	RPS24P18	1	1	-0.387405
chr18	26133852	26193355	26163603	ENSG00000154611.14	+	protein_coding	KNOWN	PSMA8	5	8	-0.471013
chr18	26170726	26171284	26171005	ENSG00000188985.6	-	processed_pseudogene	KNOWN	DHFRP1	1	1	-0.657358
chr18	26204869	26205904	26205386	ENSG00000266227.1	+	processed_pseudogene	KNOWN	NPM1P2	1	3	-0.393435
chr18	26225936	26391685	26308810	ENSG00000141384.11	+	protein_coding	KNOWN	TAF4B	4	17	-0.294387
chr18	26255698	26256355	26256026	ENSG00000263829.1	-	processed_pseudogene	KNOWN	FAM60BP	1	1	-0.242427
chr18	26266009	26267409	26266709	ENSG00000266237.1	+	sense_intronic	KNOWN	RP11-25D3.1	1	2	-0.242427
chr18	26348347	26349004	26348675	ENSG00000264911.1	+	processed_pseudogene	KNOWN	RP11-107K17.2	1	1	-0.539513
chr18	26366301	26366406	26366353	ENSG00000207160.1	-	snRNA	KNOWN	RNU6-1289P	1	1	-0.264152
chr18	26422995	26426101	26424548	ENSG00000263862.1	+	lincRNA	KNOWN	LINC01543	1	3	0.208715
chr18	26454910	26657401	26556155	ENSG00000134504.12	-	protein_coding	KNOWN	KCTD1	11	6	-0.039583
chr18	26542971	26545791	26544381	ENSG00000277534.1	-	sense_intronic	KNOWN	RP11-9E17.1	1	1	0.114018
chr18	26565723	26575626	26570674	ENSG00000275805.1	-	sense_intronic	KNOWN	RP11-349H17.2	1	2	-0.133620
chr18	26586714	26586798	26586756	ENSG00000252846.1	-	miRNA	NOVEL	AC090206.1	1	1	-0.100653
chr18	26591467	26591535	26591501	ENSG00000276221.1	-	miRNA	KNOWN	MIR8057	1	1	-0.249517
chr18	26599408	26600338	26599873	ENSG00000263846.1	+	processed_pseudogene	KNOWN	CIAPIN1P	1	1	-0.249517
chr18	26655742	27190698	26923220	ENSG00000260372.6	+	antisense	KNOWN	AQP4-AS1	8	8	-0.376240
chr18	26687621	26703638	26695629	ENSG00000265369.3	-	lincRNA	KNOWN	PCAT18	1	2	-0.247196
chr18	26688111	26689668	26688889	ENSG00000263677.1	+	lincRNA	KNOWN	RP11-17A19.2	1	2	-0.532141
chr18	26689316	26689529	26689422	ENSG00000275900.1	-	snoRNA	NOVEL	U3	1	1	-0.532141
chr18	26822813	26823979	26823396	ENSG00000263382.1	-	lincRNA	KNOWN	RP11-552O4.1	1	2	-0.482401
chr18	26831520	26832432	26831976	ENSG00000266184.1	-	processed_pseudogene	KNOWN	RP11-552O4.2	1	1	-0.440229
chr18	26852038	26865818	26858928	ENSG00000171885.13	-	protein_coding	KNOWN	AQP4	8	5	-0.203898
chr18	26906481	27185317	27045899	ENSG00000154080.12	-	protein_coding	KNOWN	CHST9	4	6	-0.437030
chr18	26952201	26952558	26952379	ENSG00000266549.1	-	processed_pseudogene	KNOWN	RP11-526I8.2	1	1	-0.384107
chr18	27225742	27247188	27236465	ENSG00000265374.1	+	lincRNA	KNOWN	RP11-57J16.1	1	5	-0.123638
chr18	27336379	27595164	27465771	ENSG00000264151.5	-	lincRNA	KNOWN	RP11-739N10.1	5	5	-0.555079
chr18	27343252	27346110	27344681	ENSG00000264790.1	+	lincRNA	KNOWN	RP11-26N15.2	1	3	-0.411899
chr18	27355406	27355764	27355585	ENSG00000244329.1	-	processed_pseudogene	KNOWN	UBA52P9	1	1	-0.616545
chr18	27397952	27401904	27399928	ENSG00000263611.1	+	lincRNA	KNOWN	RP11-612A1.1	1	2	-0.786446
chr18	27418884	27420435	27419659	ENSG00000265097.1	-	processed_pseudogene	KNOWN	RBM22P1	1	2	-0.407241
chr18	27452514	27453657	27453085	ENSG00000263405.1	-	processed_pseudogene	KNOWN	PA2G4P3	1	1	-0.431043
chr18	27452623	27452712	27452667	ENSG00000280492.1	-	miRNA	NOVEL	AC068408.1	1	1	-0.431043
chr18	27950966	28177446	28064206	ENSG00000170558.8	-	protein_coding	KNOWN	CDH2	5	16	0.007802
chr18	27954519	27963687	27959103	ENSG00000227279.1	+	antisense	KNOWN	AC015933.2	1	3	0.175650
chr18	28146233	28146703	28146468	ENSG00000274578.1	-	sense_intronic	KNOWN	RP11-430E17.1	1	1	0.223236
chr18	28651732	28653208	28652470	ENSG00000266296.1	+	processed_pseudogene	KNOWN	ARIH2P1	1	1	-0.138492
chr18	28785068	28789260	28787164	ENSG00000265994.1	+	lincRNA	KNOWN	RP11-510D21.1	1	2	-0.411246
chr18	28824652	28824826	28824739	ENSG00000271238.1	-	processed_pseudogene	KNOWN	RP11-510D21.2	1	1	-0.668542
chr18	29048620	29048719	29048669	ENSG00000251719.1	+	snRNA	KNOWN	RNU6-408P	1	1	-0.844583
chr18	29095575	29095679	29095627	ENSG00000265730.1	-	miRNA	NOVEL	AC090349.1	1	1	-0.329648
chr18	29196441	29196527	29196484	ENSG00000212085.3	+	miRNA	NOVEL	AC105245.1	1	1	-0.262673
chr18	29256817	29257060	29256938	ENSG00000266479.1	-	processed_pseudogene	KNOWN	CTD-2515C13.1	1	1	-0.566089
chr18	29278509	29361963	29320236	ENSG00000265980.1	-	lincRNA	KNOWN	CTD-2515C13.2	1	3	-0.372236
chr18	29483328	29483423	29483375	ENSG00000221731.1	+	miRNA	NOVEL	AC091321.1	1	1	-0.717786
chr18	29518259	29548241	29533250	ENSG00000264587.5	+	lincRNA	KNOWN	RP11-784B15.1	2	7	-0.527704
chr18	29928555	29928708	29928631	ENSG00000274900.1	+	miRNA	NOVEL	AC013660.1	1	1	-0.526918
chr18	30713275	30714286	30713780	ENSG00000266196.1	+	lincRNA	KNOWN	RP11-675P14.1	1	2	-0.582767
chr18	30780006	30780424	30780215	ENSG00000279734.1	+	TEC	KNOWN	RP11-675P14.2	1	1	-0.663904
chr18	30954820	30980917	30967868	ENSG00000265670.1	-	lincRNA	KNOWN	RP11-25I11.1	1	3	-0.348254
chr18	30984106	30984215	30984160	ENSG00000251702.1	+	snRNA	KNOWN	RNU6-857P	1	1	-0.234659
chr18	30990008	31042815	31016411	ENSG00000134762.16	-	protein_coding	KNOWN	DSC3	3	17	-0.596955
chr18	31058840	31102415	31080627	ENSG00000134755.14	-	protein_coding	KNOWN	DSC2	2	17	-0.396344
chr18	31101588	31162789	31132188	ENSG00000265888.1	+	antisense	KNOWN	DSCAS	1	4	-0.499751
chr18	31129236	31162856	31146046	ENSG00000134765.9	-	protein_coding	KNOWN	DSC1	2	17	-0.534084
chr18	31131456	31132494	31131975	ENSG00000263698.1	+	antisense	KNOWN	RP11-408H20.3	1	1	-0.633833
chr18	31318089	31357029	31337559	ENSG00000134760.5	+	protein_coding	KNOWN	DSG1	2	15	-0.602282
chr18	31343368	31426988	31385178	ENSG00000266729.5	-	antisense	KNOWN	DSG1-AS1	4	4	-0.489407
chr18	31345362	31345467	31345414	ENSG00000207019.1	-	snRNA	KNOWN	RNU6-167P	1	1	-0.891134
chr18	31376777	31414912	31395844	ENSG00000175065.11	+	protein_coding	KNOWN	DSG4	2	16	-0.451643
chr18	31382317	31382430	31382373	ENSG00000207240.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.597408
chr18	31447795	31478702	31463248	ENSG00000134757.4	+	protein_coding	KNOWN	DSG3	1	16	-0.551877
chr18	31496645	31497195	31496920	ENSG00000266521.1	-	lincRNA	KNOWN	RP11-650P15.1	1	2	-0.255932
chr18	31498043	31549008	31523525	ENSG00000046604.12	+	protein_coding	KNOWN	DSG2	2	15	-0.555617
chr18	31542146	31556911	31549528	ENSG00000264859.5	-	antisense	KNOWN	DSG2-AS1	2	6	-0.487713
chr18	31591726	31599021	31595373	ENSG00000118271.9	+	protein_coding	KNOWN	TTR	5	8	-0.100653
chr18	31622247	31685836	31654041	ENSG00000118276.11	-	protein_coding	KNOWN	B4GALT6	5	9	-0.604695
chr18	31685655	31686823	31686239	ENSG00000259985.1	+	antisense	KNOWN	RP11-549B18.1	1	1	-1.003489
chr18	31718893	31719208	31719050	ENSG00000200472.1	+	misc_RNA	KNOWN	RN7SKP44	1	1	-0.261645
chr18	31724198	31726956	31725577	ENSG00000265158.1	+	transcribed_processed_pseudogene	KNOWN	LRRC37A7P	2	2	-0.261645
chr18	31726043	31726397	31726220	ENSG00000263772.1	-	processed_pseudogene	KNOWN	RP11-549B18.3	1	1	-0.261645
chr18	31759562	31760880	31760221	ENSG00000141437.8	-	protein_coding	KNOWN	SLC25A52	1	1	-0.046392
chr18	31829173	31953136	31891154	ENSG00000153339.13	-	protein_coding	KNOWN	TRAPPC8	13	30	-0.187182
chr18	31844388	31845178	31844783	ENSG00000263924.1	+	antisense	KNOWN	RP11-210K20.2	1	2	-0.201999
chr18	31883288	31883728	31883508	ENSG00000276486.1	+	processed_pseudogene	KNOWN	RP11-210K20.6	1	1	-0.155936
chr18	31895745	31896410	31896077	ENSG00000276282.1	-	sense_intronic	KNOWN	RP11-210K20.5	1	1	-0.149016
chr18	31937533	31937639	31937586	ENSG00000222320.1	+	snRNA	KNOWN	RNU6-1050P	1	1	-0.189294
chr18	31942575	31944156	31943365	ENSG00000263823.1	+	antisense	KNOWN	RP11-326K13.4	1	1	-0.189294
chr18	31962178	31963618	31962898	ENSG00000265273.1	+	processed_pseudogene	KNOWN	PGDP1	1	1	0.020290
chr18	31966960	31967545	31967252	ENSG00000266105.1	+	processed_pseudogene	KNOWN	RP11-326K13.2	1	1	0.020290
chr18	31982899	31986087	31984493	ENSG00000280380.1	+	TEC	KNOWN	RP11-326K13.3	1	1	-0.070280
chr18	32018372	32073213	32045792	ENSG00000101695.8	+	protein_coding	KNOWN	RNF125	5	6	-0.280000
chr18	32018829	32111779	32065304	ENSG00000263917.1	+	processed_transcript	KNOWN	RP11-53I6.2	1	5	-0.202683
chr18	32031035	32031359	32031197	ENSG00000274275.1	+	sense_intronic	KNOWN	RP11-326K13.5	1	1	-0.137490
chr18	32060905	32060989	32060947	ENSG00000265063.1	-	miRNA	NOVEL	AC009831.1	1	1	-0.352192
chr18	32075885	32076272	32076078	ENSG00000214917.3	-	processed_pseudogene	KNOWN	RP11-53I6.1	1	1	-0.245449
chr18	32091295	32092119	32091707	ENSG00000265008.1	-	antisense	KNOWN	RP11-53I6.3	1	2	0.047044
chr18	32091855	32131561	32111708	ENSG00000134758.13	+	protein_coding	KNOWN	RNF138	9	8	-0.125201
chr18	32122400	32124478	32123439	ENSG00000263393.1	-	antisense	KNOWN	RP11-53I6.4	1	2	-0.276547
chr18	32124877	32470484	32297680	ENSG00000141441.15	-	protein_coding	KNOWN	GAREM	4	6	-0.423125
chr18	32176050	32176168	32176109	ENSG00000199373.1	-	rRNA	KNOWN	RNA5SP453	1	1	-0.551864
chr18	32185069	32220404	32202736	ENSG00000141434.11	+	protein_coding	KNOWN	MEP1B	4	15	-0.410982
chr18	32196026	32196966	32196496	ENSG00000265279.1	-	processed_pseudogene	KNOWN	CLUHP6	1	1	-0.480371
chr18	32245946	32249032	32247489	ENSG00000263904.1	-	sense_intronic	KNOWN	RP11-344B2.3	1	2	-0.525986
chr18	32263135	32263234	32263184	ENSG00000222395.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.520583
chr18	32287437	32290340	32288888	ENSG00000264982.1	+	antisense	KNOWN	RP11-344B2.2	1	2	-0.504387
chr18	32412182	32413236	32412709	ENSG00000262477.1	+	lincRNA	NOVEL	AC021224.1	1	2	-0.251310
chr18	32412214	32413176	32412695	ENSG00000215492.6	-	processed_pseudogene	KNOWN	HNRNPA1P7	1	1	-0.251310
chr18	32511663	32514634	32513148	ENSG00000260389.1	+	transcribed_processed_pseudogene	KNOWN	WBP11P1	2	1	-0.403419
chr18	32526142	32526222	32526182	ENSG00000221621.1	+	miRNA	NOVEL	AC009835.1	1	1	-0.403419
chr18	32581528	32582828	32582178	ENSG00000263688.1	+	lincRNA	KNOWN	RP11-386P4.1	1	2	-0.345072
chr18	32672671	32773062	32722866	ENSG00000197705.9	-	protein_coding	KNOWN	KLHL14	3	9	-0.345294
chr18	32769795	32774413	32772104	ENSG00000228835.1	+	antisense	KNOWN	AC012123.1	1	4	-0.447864
chr18	32779039	32779286	32779162	ENSG00000243355.1	+	processed_pseudogene	KNOWN	RP11-57G22.1	1	1	-0.454290
chr18	32833454	32938316	32885885	ENSG00000263765.5	+	antisense	KNOWN	RP11-746B8.1	5	4	-0.471845
chr18	32937402	33441101	33189251	ENSG00000166960.16	-	protein_coding	KNOWN	CCDC178	13	23	-0.596254
chr18	32954075	32957998	32956036	ENSG00000263450.1	+	antisense	KNOWN	RP11-680N20.1	1	4	-0.763618
chr18	33552123	33578187	33565155	ENSG00000267642.1	-	lincRNA	KNOWN	RP11-258B16.1	1	2	-0.808342
chr18	33578615	33751192	33664903	ENSG00000141431.9	+	protein_coding	KNOWN	ASXL3	15	14	-0.588685
chr18	33851100	34224952	34038026	ENSG00000101746.15	-	protein_coding	KNOWN	NOL4	14	11	-0.621282
chr18	34001698	34001799	34001748	ENSG00000199204.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.431570
chr18	34221007	34221603	34221305	ENSG00000280406.1	-	TEC	KNOWN	RP11-379L18.2	1	1	-0.509090
chr18	34222965	34224761	34223863	ENSG00000267746.1	+	antisense	KNOWN	RP11-379L18.1	1	2	-0.509090
chr18	34225930	34226429	34226179	ENSG00000278052.1	+	lincRNA	KNOWN	RP11-379L18.3	1	1	-0.509090
chr18	34493290	34891844	34692567	ENSG00000134769.21	+	protein_coding	KNOWN	DTNA	35	22	-0.441146
chr18	34573987	34574523	34574255	ENSG00000267585.1	-	processed_pseudogene	KNOWN	RP11-115P21.1	1	1	-0.727927
chr18	34737795	34767663	34752729	ENSG00000268873.1	-	antisense	KNOWN	RP11-138H11.1	1	5	-0.406566
chr18	34819946	34820031	34819988	ENSG00000221409.1	-	miRNA	NOVEL	AC068506.1	1	1	-0.217693
chr18	34892013	34902885	34897449	ENSG00000278464.1	-	lincRNA	KNOWN	RP11-96A15.1	3	2	-0.344525
chr18	34976928	35143470	35060199	ENSG00000166974.12	+	protein_coding	KNOWN	MAPRE2	13	8	-0.204253
chr18	35082009	35082242	35082125	ENSG00000280096.1	+	TEC	KNOWN	RP11-294N21.2	1	1	-0.206920
chr18	35144942	35145417	35145179	ENSG00000274400.1	+	lincRNA	KNOWN	RP11-294N21.3	1	1	0.054124
chr18	35241030	35267133	35254081	ENSG00000186812.12	+	protein_coding	KNOWN	ZNF397	12	6	0.056337
chr18	35251058	35290245	35270651	ENSG00000186814.12	-	protein_coding	KNOWN	ZSCAN30	11	5	0.221741
chr18	35257040	35257512	35257276	ENSG00000279989.1	+	TEC	KNOWN	RP11-158H5.2	1	1	0.287912
chr18	35268218	35270238	35269228	ENSG00000274184.1	+	lincRNA	KNOWN	RP11-158H5.8	1	1	0.273060
chr18	35280867	35290201	35285534	ENSG00000268573.1	-	lincRNA	KNOWN	RP11-158H5.7	1	2	0.157846
chr18	35290282	35310766	35300524	ENSG00000257267.2	+	unitary_pseudogene	KNOWN	ZNF271P	2	3	-0.053468
chr18	35317396	35317848	35317622	ENSG00000274918.1	+	lincRNA	KNOWN	RP11-54G14.1	1	1	-0.215332
chr18	35332212	35345482	35338847	ENSG00000172466.15	-	protein_coding	KNOWN	ZNF24	6	4	-0.027918
chr18	35366697	35377337	35372017	ENSG00000186496.10	-	protein_coding	KNOWN	ZNF396	6	5	-0.009612
chr18	35383354	35384025	35383689	ENSG00000239683.1	-	processed_pseudogene	KNOWN	RP11-322E11.1	1	1	-0.142020
chr18	35403996	35406528	35405262	ENSG00000275512.1	-	lincRNA	KNOWN	RP11-322E11.2	1	1	-0.418424
chr18	35443869	35467088	35455478	ENSG00000267583.5	-	lincRNA	KNOWN	RP11-322E11.5	3	3	-0.013300
chr18	35443871	35497940	35470905	ENSG00000267140.1	-	protein_coding	KNOWN	RP11-322E11.6	1	3	0.101288
chr18	35452230	35497991	35475110	ENSG00000153391.15	-	protein_coding	KNOWN	INO80C	12	7	0.134454
chr18	35466938	35466991	35466964	ENSG00000277489.1	-	miRNA	NOVEL	AC007998.1	1	1	0.023686
chr18	35483431	35483667	35483549	ENSG00000279074.1	-	TEC	KNOWN	RP11-322E11.3	1	1	0.163545
chr18	35581117	35711834	35646475	ENSG00000141429.13	+	protein_coding	KNOWN	GALNT1	6	12	-0.151610
chr18	35595901	35597599	35596750	ENSG00000266965.1	+	sense_intronic	KNOWN	RP11-712P20.2	1	1	-0.079961
chr18	35716370	35717978	35717174	ENSG00000267397.1	+	lincRNA	KNOWN	RP11-873E20.1	1	1	-0.151737
chr18	35841759	35842617	35842188	ENSG00000267797.1	+	processed_pseudogene	KNOWN	NRBF2P1	1	1	-0.172711
chr18	35904818	35904926	35904872	ENSG00000207797.1	-	miRNA	KNOWN	MIR187	1	1	-0.098530
chr18	35934088	35934142	35934115	ENSG00000265641.1	-	miRNA	KNOWN	MIR3929	1	1	-0.415350
chr18	35951803	35966118	35958960	ENSG00000267627.5	-	lincRNA	KNOWN	RP11-905K4.1	2	3	-0.250533
chr18	35972083	35979286	35975684	ENSG00000141428.16	+	protein_coding	KNOWN	C18orf21	8	5	-0.175230
chr18	35972151	35973916	35973033	ENSG00000278986.1	+	TEC	KNOWN	RP11-723J4.3	1	1	-0.175230
chr18	35984387	36067576	36025981	ENSG00000141425.17	-	protein_coding	KNOWN	RPRD1A	11	9	-0.025497
chr18	36108532	36129385	36118958	ENSG00000141424.12	-	protein_coding	KNOWN	SLC39A6	4	10	0.120537
chr18	36129444	36180556	36155000	ENSG00000134759.13	+	protein_coding	KNOWN	ELP2	28	23	0.338982
chr18	36179996	36187448	36183722	ENSG00000260552.1	-	antisense	KNOWN	RP11-49I11.1	1	2	0.404460
chr18	36187519	36272157	36229838	ENSG00000075643.5	+	protein_coding	KNOWN	MOCOS	2	15	0.249011
chr18	36189824	36190272	36190048	ENSG00000274849.1	+	sense_intronic	KNOWN	RP11-49I11.4	1	1	0.441546
chr18	36273574	36274599	36274086	ENSG00000267404.1	+	processed_pseudogene	KNOWN	RP11-49I11.2	1	1	-0.374326
chr18	36278735	36279119	36278927	ENSG00000267456.2	-	processed_pseudogene	KNOWN	RP11-49I11.3	1	1	-0.374326
chr18	36297714	36780055	36538884	ENSG00000134775.15	+	protein_coding	KNOWN	FHOD3	9	29	0.269784
chr18	36777647	36829216	36803431	ENSG00000134779.14	-	protein_coding	KNOWN	TPGS2	21	7	0.193822
chr18	36829106	37232172	37030639	ENSG00000150477.14	+	protein_coding	KNOWN	KIAA1328	12	11	-0.383083
chr18	36901946	36923814	36912880	ENSG00000267039.1	-	antisense	KNOWN	RP11-58G13.1	1	4	-0.458647
chr18	37234119	37236242	37235180	ENSG00000267651.1	-	lincRNA	KNOWN	RP11-95O2.1	1	1	-0.158552
chr18	37243047	37566037	37404542	ENSG00000101489.19	-	protein_coding	KNOWN	CELF4	23	13	0.321578
chr18	37243776	37247506	37245641	ENSG00000267707.2	+	antisense	KNOWN	RP11-95O2.5	1	2	-0.158552
chr18	37273706	37276572	37275139	ENSG00000267202.5	+	antisense	KNOWN	RP11-797E24.3	2	5	0.319714
chr18	37305295	37306333	37305814	ENSG00000279678.1	-	TEC	KNOWN	RP11-797E24.1	1	1	0.382148
chr18	37473330	37473977	37473653	ENSG00000279543.1	-	TEC	KNOWN	RP11-1147P1.1	1	1	0.638626
chr18	37657135	37657215	37657175	ENSG00000266530.1	+	miRNA	KNOWN	MIR4318	1	1	-0.365481
chr18	37672689	37673176	37672932	ENSG00000243516.1	+	processed_pseudogene	KNOWN	RPL12P40	1	1	-0.072639
chr18	38655209	38687998	38671603	ENSG00000268566.5	-	lincRNA	KNOWN	RP11-687D19.1	3	4	-0.585119
chr18	39016047	39016344	39016195	ENSG00000222704.1	-	misc_RNA	KNOWN	RN7SKP182	1	1	-0.488469
chr18	39034007	39034110	39034058	ENSG00000253038.1	+	snRNA	KNOWN	RNU6-706P	1	1	-0.453977
chr18	39206924	39800318	39503621	ENSG00000267374.1	-	lincRNA	KNOWN	RP11-244M2.1	2	4	-0.415153
chr18	39334872	39335672	39335272	ENSG00000175886.10	-	processed_pseudogene	KNOWN	RPL7AP66	1	1	-0.306558
chr18	39676721	39676779	39676750	ENSG00000266148.1	+	miRNA	KNOWN	MIR5583-2	1	1	-0.274994
chr18	39678520	39678622	39678571	ENSG00000212354.1	-	snRNA	KNOWN	RNU6-1242P	1	1	-0.274994
chr18	39841174	39924840	39883007	ENSG00000267413.1	-	lincRNA	KNOWN	RP11-636O21.1	1	5	-0.371789
chr18	40062903	40066471	40064687	ENSG00000279034.1	-	TEC	KNOWN	RP11-5A1.1	1	1	-0.201999
chr18	40066286	40099233	40082759	ENSG00000261715.1	+	lincRNA	KNOWN	LINC01477	1	4	-0.533543
chr18	40143926	40144504	40144215	ENSG00000267664.1	-	processed_pseudogene	KNOWN	RPL17P45	1	2	-0.620521
chr18	41465783	41632185	41548984	ENSG00000267313.7	-	lincRNA	KNOWN	KC6	9	6	-0.351602
chr18	41789162	41789395	41789278	ENSG00000267652.1	-	processed_pseudogene	KNOWN	RP11-188I24.1	1	1	-0.068473
chr18	41819053	41819421	41819237	ENSG00000225253.1	+	processed_pseudogene	KNOWN	AC011225.1	1	1	-0.217492
chr18	41955206	42087830	42021518	ENSG00000078142.11	+	protein_coding	KNOWN	PIK3C3	16	25	-0.352641
chr18	42052705	42053030	42052867	ENSG00000276174.1	+	sense_intronic	KNOWN	RP11-687E1.2	1	1	-0.368643
chr18	42089312	42089752	42089532	ENSG00000267088.1	+	processed_pseudogene	KNOWN	RP11-115N12.1	1	1	-0.289098
chr18	42159283	42691422	42425352	ENSG00000267586.6	+	lincRNA	KNOWN	LINC00907	11	10	-0.399537
chr18	42270589	42270715	42270652	ENSG00000253040.1	+	rRNA	KNOWN	RNA5SP454	1	1	-0.338643
chr18	42743227	43115691	42929459	ENSG00000152214.12	-	protein_coding	KNOWN	RIT2	4	6	-0.550054
chr18	43267878	43277650	43272764	ENSG00000132872.11	-	protein_coding	KNOWN	SYT4	8	4	-0.393294
chr18	43499173	43499836	43499504	ENSG00000278933.1	+	TEC	KNOWN	RP11-789C7.1	1	1	-0.397664
chr18	43832159	43832265	43832212	ENSG00000202250.1	-	snRNA	KNOWN	RNU6-443P	1	1	-0.497006
chr18	44039471	44040140	44039805	ENSG00000267716.1	+	processed_pseudogene	KNOWN	AC083760.1	1	1	-0.422581
chr18	44071583	44071701	44071642	ENSG00000202060.1	+	rRNA	KNOWN	RNA5SP455	1	1	-0.081775
chr18	44320800	44322257	44321528	ENSG00000267573.1	-	processed_pseudogene	KNOWN	KRT8P5	1	1	-0.397212
chr18	44323436	44531697	44427566	ENSG00000267337.1	-	lincRNA	KNOWN	LINC01478	2	5	-0.369319
chr18	44522366	44523074	44522720	ENSG00000277899.1	+	processed_pseudogene	KNOWN	MLECP1	1	1	-0.414469
chr18	44676927	44679717	44678322	ENSG00000267414.1	-	lincRNA	KNOWN	RP11-456K23.1	1	2	-0.235439
chr18	44680173	45068510	44874341	ENSG00000152217.16	+	protein_coding	KNOWN	SETBP1	3	6	-0.043402
chr18	44732575	44733315	44732945	ENSG00000280365.1	+	TEC	KNOWN	RP11-9H20.2	1	1	0.027861
chr18	44970082	44970166	44970124	ENSG00000265957.1	-	miRNA	KNOWN	MIR4319	1	1	-0.253783
chr18	44986109	44989203	44987656	ENSG00000279319.1	+	TEC	KNOWN	RP11-693M3.1	1	1	-0.253783
chr18	45130565	45181347	45155956	ENSG00000267101.5	-	antisense	KNOWN	RP11-846C15.2	2	4	-0.172106
chr18	45212995	45683686	45448340	ENSG00000132874.13	+	protein_coding	KNOWN	SLC14A2	4	21	0.004642
chr18	45423764	45483218	45453491	ENSG00000267097.1	-	antisense	KNOWN	SLC14A2-AS1	4	6	-0.116952
chr18	45483345	45529855	45506600	ENSG00000266988.5	+	sense_intronic	KNOWN	RP11-749H17.1	4	4	-0.301093
chr18	45507202	45550183	45528692	ENSG00000267354.1	+	sense_intronic	KNOWN	RP11-749H17.2	1	4	0.010717
chr18	45646153	45647937	45647045	ENSG00000266968.2	+	sense_intronic	KNOWN	RP11-116O18.1	1	1	0.412325
chr18	45669367	45747215	45708291	ENSG00000267193.5	-	antisense	KNOWN	RP11-116O18.3	2	4	0.263188
chr18	45724127	45752520	45738323	ENSG00000141469.16	+	protein_coding	KNOWN	SLC14A1	21	11	0.165668
chr18	45788530	45788670	45788600	ENSG00000267558.2	+	processed_pseudogene	KNOWN	RP11-618K16.4	1	1	0.292689
chr18	45825512	45844080	45834796	ENSG00000197046.11	+	protein_coding	KNOWN	SIGLEC15	5	6	0.470932
chr18	45847609	45967274	45907441	ENSG00000152223.12	-	protein_coding	KNOWN	EPG5	10	44	0.258368
chr18	45983536	46072272	46027904	ENSG00000152229.18	-	protein_coding	KNOWN	PSTPIP2	6	15	0.156435
chr18	45989653	45989945	45989799	ENSG00000222179.1	-	misc_RNA	KNOWN	RN7SKP26	1	1	0.240090
chr18	46028306	46029829	46029067	ENSG00000267293.1	+	processed_pseudogene	KNOWN	RP11-8H2.1	1	1	0.216798
chr18	46077004	46077099	46077051	ENSG00000252034.1	-	misc_RNA	KNOWN	RNY4P37	1	1	0.601005
chr18	46080248	46104334	46092291	ENSG00000152234.15	-	protein_coding	KNOWN	ATP5A1	20	13	0.423449
chr18	46104332	46128333	46116332	ENSG00000152240.12	+	protein_coding	KNOWN	HAUS1	12	10	0.093813
chr18	46121615	46121721	46121668	ENSG00000251939.1	-	snRNA	KNOWN	RNU6-1278P	1	1	0.029256
chr18	46173553	46266991	46220272	ENSG00000152242.10	+	protein_coding	KNOWN	C18orf25	6	5	0.021107
chr18	46326809	46463140	46394974	ENSG00000141622.13	+	protein_coding	KNOWN	RNF165	8	8	0.093272
chr18	46385707	46387083	46386395	ENSG00000279829.1	+	TEC	KNOWN	RP11-63I8.1	1	1	-0.123946
chr18	46476972	46657033	46567002	ENSG00000167210.16	-	protein_coding	KNOWN	LOXHD1	12	40	-0.015408
chr18	46667821	46759257	46713539	ENSG00000101638.13	-	protein_coding	KNOWN	ST8SIA5	9	9	0.117755
chr18	46706446	46706558	46706502	ENSG00000274794.1	-	miRNA	NOVEL	AC090311.1	1	1	0.069272
chr18	46722975	46723223	46723099	ENSG00000240983.1	+	processed_pseudogene	KNOWN	RP11-742D12.1	1	1	0.193022
chr18	46756487	46764408	46760447	ENSG00000270112.3	+	processed_transcript	KNOWN	RP11-742D12.2	3	2	-0.365591
chr18	46786699	46789297	46787998	ENSG00000274776.1	-	lincRNA	KNOWN	RP11-687F6.5	1	1	-0.305344
chr18	46803224	46920160	46861692	ENSG00000078043.15	-	protein_coding	KNOWN	PIAS2	16	14	-0.210513
chr18	46852632	46853882	46853257	ENSG00000267587.1	-	processed_pseudogene	KNOWN	RP11-687F6.4	1	3	-0.314825
chr18	46915021	46915623	46915322	ENSG00000279354.1	-	TEC	KNOWN	RP11-776B3.1	1	1	-0.090385
chr18	46917492	47102243	47009867	ENSG00000167216.16	+	protein_coding	KNOWN	KATNAL2	8	16	-0.035363
chr18	46962768	46964408	46963588	ENSG00000274744.1	-	protein_coding	KNOWN	TCEB3CL2	1	1	-0.294425
chr18	46968695	47029842	46999268	ENSG00000275553.2	-	protein_coding	KNOWN	TCEB3CL	2	2	0.016605
chr18	47022287	47023927	47023107	ENSG00000278674.1	-	protein_coding	KNOWN	RP11-49K24.9	1	1	0.000000
chr18	47028202	47030078	47029140	ENSG00000183791.4	-	protein_coding	KNOWN	TCEB3C	1	1	0.001032
chr18	47032572	47035621	47034096	ENSG00000206181.5	-	protein_coding	KNOWN	TCEB3B	2	3	0.024497
chr18	47076117	47076594	47076355	ENSG00000280212.1	+	TEC	KNOWN	RP11-49K24.3	1	1	-0.141068
chr18	47077361	47091280	47084320	ENSG00000266957.1	-	antisense	KNOWN	RP11-49K24.4	1	2	-0.122799
chr18	47105946	47108062	47107004	ENSG00000267724.1	+	antisense	KNOWN	RP11-49K24.8	1	1	0.057435
chr18	47107403	47150520	47128961	ENSG00000167220.11	-	protein_coding	KNOWN	HDHD2	13	7	-0.159808
chr18	47134656	47176281	47155468	ENSG00000267228.6	-	protein_coding	KNOWN	RP11-49K24.6	3	6	-0.191858
chr18	47137018	47137290	47137154	ENSG00000267800.1	+	processed_pseudogene	KNOWN	RP11-49K24.5	1	1	-0.145047
chr18	47152998	47176374	47164686	ENSG00000134049.4	-	protein_coding	KNOWN	IER3IP1	1	3	-0.221997
chr18	47212089	47249183	47230636	ENSG00000215474.6	-	protein_coding	KNOWN	SKOR2	3	7	-0.419602
chr18	47234442	47234548	47234495	ENSG00000201825.1	-	snRNA	KNOWN	RNU6-1131P	1	1	-0.009292
chr18	47285725	47594550	47440137	ENSG00000267761.3	+	lincRNA	KNOWN	CTD-2130O13.1	3	4	-0.144375
chr18	47380496	47380565	47380530	ENSG00000266582.1	+	miRNA	KNOWN	MIR4527	1	1	-0.172655
chr18	47501172	47558383	47529777	ENSG00000261307.1	+	lincRNA	KNOWN	RP11-157P23.2	1	4	-0.166920
chr18	47501172	47503106	47502139	ENSG00000279367.1	+	TEC	KNOWN	RP11-157P23.1	1	1	-0.099586
chr18	47630112	47630848	47630480	ENSG00000267156.1	+	processed_pseudogene	KNOWN	TPMTP1	1	1	-0.141068
chr18	47703175	47703745	47703460	ENSG00000267187.1	+	processed_pseudogene	KNOWN	RP11-767C4.1	1	1	-0.047866
chr18	47808957	47931146	47870051	ENSG00000175387.15	-	protein_coding	KNOWN	SMAD2	12	11	-0.014859
chr18	47853233	47853457	47853345	ENSG00000267541.1	-	processed_pseudogene	KNOWN	MTCO2P2	1	1	-0.137287
chr18	47866839	47867367	47867103	ENSG00000279707.1	+	TEC	KNOWN	RP11-380M21.1	1	1	-0.137287
chr18	47878295	47882444	47880369	ENSG00000269365.2	+	antisense	KNOWN	RP11-380M21.4	1	2	-0.184133
chr18	47912207	47912504	47912355	ENSG00000279366.1	-	TEC	KNOWN	RP11-380M21.3	1	1	-0.042101
chr18	48026673	48410752	48218712	ENSG00000184828.9	-	protein_coding	KNOWN	ZBTB7C	28	9	0.015402
chr18	48147634	48150864	48149249	ENSG00000278891.1	-	TEC	KNOWN	RP11-246E12.2	1	2	0.199733
chr18	48169784	48169890	48169837	ENSG00000206944.1	-	snRNA	KNOWN	RNU6-708P	1	1	-0.110398
chr18	48252301	48252837	48252569	ENSG00000280197.1	+	TEC	KNOWN	C18orf12	1	1	-0.505249
chr18	48475487	48475600	48475543	ENSG00000200872.1	-	rRNA	KNOWN	RNA5SP456	1	1	0.177568
chr18	48478282	48478491	48478386	ENSG00000277907.1	-	processed_pseudogene	KNOWN	RP11-23B5.2	1	1	0.177568
chr18	48478561	48479228	48478894	ENSG00000266984.1	+	processed_pseudogene	KNOWN	POLR3GP2	1	1	0.177568
chr18	48539046	48863217	48701131	ENSG00000134030.13	+	protein_coding	KNOWN	CTIF	11	13	0.430234
chr18	48564795	48568342	48566568	ENSG00000278983.1	+	TEC	KNOWN	RP11-426J5.3	1	1	0.247270
chr18	48661840	48662635	48662237	ENSG00000279629.1	-	TEC	KNOWN	RP11-426J5.1	1	1	0.251300
chr18	48670582	48670693	48670637	ENSG00000266276.2	+	miRNA	NOVEL	AC048380.1	1	1	0.402840
chr18	48673575	48688419	48680997	ENSG00000267762.1	-	antisense	KNOWN	RP11-426J5.2	1	3	0.402840
chr18	48755693	48756318	48756005	ENSG00000279250.1	+	TEC	KNOWN	RP11-46D1.2	1	1	0.264261
chr18	48826051	48834770	48830410	ENSG00000267764.1	-	antisense	KNOWN	RP11-484L8.1	1	2	0.456322
chr18	48919853	48950711	48935282	ENSG00000101665.8	-	protein_coding	KNOWN	SMAD7	8	4	0.537281
chr18	48962951	48963941	48963446	ENSG00000266905.1	-	lincRNA	KNOWN	RP11-1058N17.1	1	2	0.515067
chr18	49013106	49013819	49013462	ENSG00000280335.1	+	TEC	KNOWN	RP11-15F12.6	1	1	0.663608
chr18	49023703	49048474	49036088	ENSG00000264269.1	+	antisense	KNOWN	RP11-15F12.1	1	5	0.471550
chr18	49041474	49461347	49251410	ENSG00000141627.13	-	protein_coding	KNOWN	DYM	20	17	-0.014162
chr18	49049687	49049768	49049727	ENSG00000263849.1	-	miRNA	KNOWN	MIR4744	1	1	0.406100
chr18	49066100	49066174	49066137	ENSG00000276157.1	-	miRNA	NOVEL	AC016866.1	1	1	0.338303
chr18	49116301	49126479	49121390	ENSG00000265128.1	+	antisense	KNOWN	RP11-15F12.3	1	2	-0.278191
chr18	49205912	49208781	49207346	ENSG00000266696.1	+	antisense	KNOWN	RP11-30L3.2	1	3	-0.006862
chr18	49431744	49447420	49439582	ENSG00000263895.1	-	sense_intronic	KNOWN	RP11-110H1.9	1	2	0.143831
chr18	49469803	49470223	49470013	ENSG00000264971.1	+	processed_pseudogene	KNOWN	PRR13P4	1	1	0.193325
chr18	49477250	49487252	49482251	ENSG00000177576.11	-	protein_coding	KNOWN	C18orf32	3	3	0.445102
chr18	49481681	49492479	49487080	ENSG00000215472.10	-	protein_coding	KNOWN	RPL17-C18orf32	3	8	0.413244
chr18	49484536	49486149	49485342	ENSG00000263916.1	-	sense_intronic	KNOWN	RP11-110H1.4	1	2	0.445102
chr18	49487339	49491878	49489608	ENSG00000265496.3	+	antisense	KNOWN	MIR1539	1	2	0.387680
chr18	49487373	49487422	49487397	ENSG00000278544.1	+	miRNA	KNOWN	MIR1539	1	1	0.445102
chr18	49488453	49492523	49490488	ENSG00000265681.7	-	protein_coding	KNOWN	RPL17	24	8	0.359081
chr18	49489245	49489308	49489276	ENSG00000202093.1	-	snoRNA	KNOWN	SNORD58C	1	1	0.445102
chr18	49491283	49491347	49491315	ENSG00000206602.1	-	snoRNA	KNOWN	SNORD58A	1	1	0.306391
chr18	49491664	49491729	49491696	ENSG00000271982.1	-	snoRNA	KNOWN	SNORD58B	1	1	0.306391
chr18	49495147	49496896	49496021	ENSG00000265182.1	-	processed_pseudogene	KNOWN	SRP72P1	1	1	0.306391
chr18	49499390	49501860	49500625	ENSG00000264464.1	+	lincRNA	KNOWN	RP11-110H1.8	1	2	0.306391
chr18	49560699	49599182	49579940	ENSG00000101670.11	+	protein_coding	KNOWN	LIPG	7	10	0.352210
chr18	49650350	49651160	49650755	ENSG00000267444.1	+	processed_pseudogene	KNOWN	SMUG1P1	1	1	0.260115
chr18	49739823	49742063	49740943	ENSG00000267674.1	-	lincRNA	KNOWN	RP11-813F20.2	1	2	-0.010819
chr18	49782167	49813960	49798063	ENSG00000167315.17	-	protein_coding	KNOWN	ACAA2	7	10	-0.154580
chr18	49795793	49837623	49816708	ENSG00000266997.2	-	protein_coding	KNOWN	RP11-886H22.1	1	7	-0.092490
chr18	49814023	49851059	49832541	ENSG00000267322.2	+	antisense	KNOWN	SNHG22	3	4	-0.116145
chr18	49814133	49814276	49814204	ENSG00000251992.1	+	scaRNA	KNOWN	SCARNA17	1	1	0.117987
chr18	49814361	49814443	49814402	ENSG00000252139.1	+	scaRNA	NOVEL	SCARNA18	1	1	0.117987
chr18	49822813	50195093	50008953	ENSG00000167306.18	-	protein_coding	KNOWN	MYO5B	8	40	0.001714
chr18	49871555	49871666	49871610	ENSG00000201668.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.032860
chr18	49946266	49946389	49946327	ENSG00000200527.1	-	rRNA	KNOWN	RNA5SP457	1	1	-0.131730
chr18	49969721	49970957	49970339	ENSG00000267196.1	-	sense_intronic	KNOWN	RP11-813F20.4	1	2	-0.030357
chr18	50063795	50064440	50064117	ENSG00000267511.1	+	processed_pseudogene	KNOWN	ADAD1P2	1	1	-0.112208
chr18	50098742	50099162	50098952	ENSG00000267591.1	+	processed_pseudogene	KNOWN	RP11-689E3.2	1	1	0.056147
chr18	50206998	50207278	50207138	ENSG00000240663.3	-	misc_RNA	KNOWN	RN7SL310P	1	1	-0.127974
chr18	50227193	50266522	50246857	ENSG00000172361.5	-	protein_coding	KNOWN	CFAP53	1	8	-0.126635
chr18	50256036	50256461	50256248	ENSG00000277310.1	-	sense_intronic	KNOWN	RP11-699C17.1	1	1	-0.085201
chr18	50266882	50281774	50274328	ENSG00000141644.17	-	protein_coding	KNOWN	MBD1	27	18	0.269239
chr18	50282343	50288304	50285323	ENSG00000154832.14	-	protein_coding	KNOWN	CXXC1	17	15	0.363064
chr18	50302190	50313595	50307892	ENSG00000267695.1	+	lincRNA	KNOWN	RP11-1030E3.1	1	2	0.151963
chr18	50318420	50319024	50318722	ENSG00000274930.1	+	processed_pseudogene	KNOWN	RP11-1030E3.2	1	1	-0.049481
chr18	50319002	50319120	50319061	ENSG00000251997.1	+	rRNA	KNOWN	RNA5SP458	1	1	-0.049481
chr18	50374995	50394173	50384584	ENSG00000154839.9	+	protein_coding	KNOWN	SKA1	5	7	-0.113323
chr18	50457887	50458795	50458341	ENSG00000239780.1	+	processed_pseudogene	KNOWN	RPLP0P11	1	1	-0.228187
chr18	50560078	50731824	50645951	ENSG00000141639.11	+	protein_coding	KNOWN	MAPK4	6	6	-0.118817
chr18	50669510	50670215	50669862	ENSG00000267713.1	+	transcribed_processed_pseudogene	KNOWN	RP11-10I6.2	1	2	0.137993
chr18	50795120	50825402	50810261	ENSG00000134042.12	-	protein_coding	KNOWN	MRO	11	9	-0.106909
chr18	50814392	50815730	50815061	ENSG00000267233.1	+	processed_pseudogene	KNOWN	HNRNPA3P16	1	2	0.053311
chr18	50823577	50824120	50823848	ENSG00000239689.1	+	processed_pseudogene	KNOWN	RPL17P46	1	1	0.053311
chr18	50879049	50954257	50916653	ENSG00000082212.11	+	protein_coding	KNOWN	ME2	5	16	-0.030973
chr18	50959267	50959379	50959323	ENSG00000200752.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.065248
chr18	50967991	50988121	50978056	ENSG00000141642.8	+	protein_coding	KNOWN	ELAC1	4	4	-0.231673
chr18	50968019	51058144	51013081	ENSG00000267699.2	+	protein_coding	KNOWN	RP11-729L2.2	2	9	-0.018832
chr18	51028394	51085045	51056719	ENSG00000141646.13	+	protein_coding	KNOWN	SMAD4	17	12	-0.270604
chr18	51158282	51159383	51158832	ENSG00000267717.1	-	processed_pseudogene	KNOWN	SRSF10P1	1	2	-0.085926
chr18	51174550	51218304	51196427	ENSG00000176624.10	-	protein_coding	KNOWN	MEX3C	4	3	-0.070625
chr18	51283733	51283896	51283814	ENSG00000207154.1	-	snRNA	KNOWN	RNU1-46P	1	1	-0.017633
chr18	51346249	51643939	51495094	ENSG00000227115.7	+	lincRNA	KNOWN	RP11-267C16.1	8	8	-0.336849
chr18	51421063	51421674	51421368	ENSG00000266201.1	-	processed_pseudogene	KNOWN	SS18L2P2	1	2	-0.317399
chr18	51433437	51434783	51434110	ENSG00000266003.1	+	processed_pseudogene	KNOWN	RP11-267C16.2	1	1	-0.436828
chr18	51612639	51613110	51612874	ENSG00000265402.1	-	processed_pseudogene	KNOWN	RSL24D1P9	1	1	-0.415350
chr18	51687525	51688209	51687867	ENSG00000265712.1	-	processed_pseudogene	KNOWN	RP11-440L16.1	1	1	-0.300850
chr18	51845007	51845628	51845317	ENSG00000215457.5	-	processed_pseudogene	KNOWN	RPS8P3	1	1	-0.514032
chr18	52336361	52339025	52337693	ENSG00000266335.1	-	lincRNA	KNOWN	RP11-25O3.1	1	2	-0.534550
chr18	52340172	53535903	52938037	ENSG00000187323.11	+	protein_coding	KNOWN	DCC	18	29	-0.510093
chr18	52409042	52409257	52409149	ENSG00000280098.1	+	protein_coding	KNOWN	AC011155.1	1	1	-0.319986
chr18	52419189	52419644	52419416	ENSG00000273762.1	-	unprocessed_pseudogene	KNOWN	VN1R76P	1	1	-0.457695
chr18	52937294	52937403	52937348	ENSG00000221291.1	+	miRNA	NOVEL	AC090660.1	1	1	-0.818371
chr18	53237101	53237190	53237145	ENSG00000263872.1	+	miRNA	KNOWN	MIR4528	1	1	-0.544318
chr18	53480835	53568283	53524559	ENSG00000264263.1	-	antisense	KNOWN	RP11-671P2.1	1	3	-0.602198
chr18	53568447	53597851	53583149	ENSG00000263438.5	+	lincRNA	KNOWN	RP11-202D1.3	3	6	-0.396945
chr18	53579623	53581059	53580341	ENSG00000260433.1	-	lincRNA	KNOWN	RP11-202D1.2	1	2	-0.402368
chr18	53605254	53605725	53605489	ENSG00000242945.2	-	processed_pseudogene	KNOWN	RPL29P32	1	1	-0.299199
chr18	54086586	54086656	54086621	ENSG00000221058.1	-	miRNA	NOVEL	AC090666.1	1	1	-0.443218
chr18	54142133	54142577	54142355	ENSG00000264296.1	+	processed_pseudogene	KNOWN	RP11-116K4.1	1	1	0.038125
chr18	54151601	54224788	54188194	ENSG00000134046.11	-	protein_coding	KNOWN	MBD2	5	7	-0.029960
chr18	54222284	54222412	54222348	ENSG00000207233.1	-	snoRNA	KNOWN	SNORA37	1	1	-0.019369
chr18	54268346	54270028	54269187	ENSG00000277324.1	-	antisense	KNOWN	RP11-850A17.1	1	1	0.076208
chr18	54269404	54321266	54295335	ENSG00000101751.10	+	protein_coding	KNOWN	POLI	16	10	-0.236752
chr18	54324358	54357964	54341161	ENSG00000174448.8	-	protein_coding	KNOWN	STARD6	4	9	-0.402113
chr18	54357917	54385218	54371567	ENSG00000166845.13	+	protein_coding	KNOWN	C18orf54	6	9	-0.259536
chr18	54406889	54407114	54407001	ENSG00000264350.1	-	processed_pseudogene	KNOWN	SNRPGP2	1	1	-0.145403
chr18	54525434	54525563	54525498	ENSG00000264564.1	+	processed_pseudogene	KNOWN	RP11-61D1.2	1	1	-0.509181
chr18	54566997	54567303	54567150	ENSG00000267428.1	+	processed_pseudogene	KNOWN	RP11-289E15.1	1	1	-0.417957
chr18	54587757	54599493	54593625	ENSG00000178690.2	+	protein_coding	KNOWN	DYNAP	2	3	-0.615760
chr18	54717860	54895516	54806688	ENSG00000041353.9	+	protein_coding	KNOWN	RAB27B	4	6	-0.273620
chr18	54744750	54745581	54745165	ENSG00000267524.1	+	processed_pseudogene	KNOWN	RPSAP57	1	1	-0.106692
chr18	54879457	54880809	54880133	ENSG00000267311.1	+	lincRNA	KNOWN	RP11-99A1.2	1	2	-0.193917
chr18	54885866	54898083	54891974	ENSG00000267112.1	-	antisense	KNOWN	RP11-839G9.1	1	4	-0.270208
chr18	54901509	54959508	54930508	ENSG00000166510.13	-	protein_coding	KNOWN	CCDC68	6	12	-0.102149
chr18	54954403	54954732	54954567	ENSG00000267647.1	+	processed_pseudogene	KNOWN	MAP1LC3P	1	1	-0.027155
chr18	55001296	55001398	55001347	ENSG00000264804.1	-	miRNA	NOVEL	AC098848.1	1	1	-0.120417
chr18	55105904	55124306	55115105	ENSG00000267013.5	-	lincRNA	KNOWN	CTD-2171N6.1	2	3	-0.017623
chr18	55146546	55146645	55146595	ENSG00000252437.1	-	rRNA	KNOWN	RNA5SP459	1	1	-0.233584
chr18	55222331	55664787	55443559	ENSG00000196628.13	-	protein_coding	KNOWN	TCF4	75	21	-0.028225
chr18	55452533	55482940	55467736	ENSG00000267028.1	+	antisense	KNOWN	TCF4-AS1	1	2	0.053760
chr18	55479221	55479298	55479259	ENSG00000264571.1	+	miRNA	KNOWN	MIR4529	1	1	0.118792
chr18	55492175	55496392	55494283	ENSG00000267402.1	+	antisense	KNOWN	TCF4-AS2	1	2	-0.103139
chr18	55635833	55636310	55636071	ENSG00000242320.2	+	processed_pseudogene	KNOWN	RPL21P126	1	1	-0.219367
chr18	55721063	55788761	55754912	ENSG00000267284.1	+	lincRNA	KNOWN	RP11-397A16.1	3	5	-0.088785
chr18	55776727	55781721	55779224	ENSG00000267325.1	-	lincRNA	KNOWN	LINC01415	2	2	0.091992
chr18	55817167	55819759	55818463	ENSG00000267172.1	+	lincRNA	KNOWN	RP11-397A16.3	1	1	-0.522457
chr18	55881688	55920199	55900943	ENSG00000260930.1	-	lincRNA	KNOWN	LINC01416	1	4	-0.086636
chr18	55893038	56023522	55958280	ENSG00000267327.1	+	lincRNA	KNOWN	CTD-2008L17.1	2	3	-0.134917
chr18	56003613	56191262	56097437	ENSG00000206129.3	-	lincRNA	KNOWN	CTD-2008L17.2	2	9	-0.010656
chr18	56042135	56096319	56069227	ENSG00000267057.5	+	lincRNA	KNOWN	RP11-456O19.2	6	4	-0.012676
chr18	56061109	56063078	56062093	ENSG00000267399.1	-	lincRNA	KNOWN	RP11-456O19.5	1	2	0.054998
chr18	56079394	56079594	56079494	ENSG00000201816.1	-	snoRNA	NOVEL	SNORA73	1	1	-0.122859
chr18	56083356	56137536	56110446	ENSG00000267712.5	-	lincRNA	KNOWN	LINC01539	6	9	0.081932
chr18	56138612	56143221	56140916	ENSG00000267732.1	+	lincRNA	KNOWN	RP11-456O19.3	1	2	-0.059172
chr18	56597208	56651600	56624404	ENSG00000091164.12	-	protein_coding	KNOWN	TXNL1	11	10	-0.207922
chr18	56651343	57036606	56843974	ENSG00000091157.13	+	protein_coding	KNOWN	WDR7	13	28	-0.320676
chr18	56753226	56753326	56753276	ENSG00000206865.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.114459
chr18	56872668	56873970	56873319	ENSG00000267146.1	-	antisense	KNOWN	RP11-383D22.1	1	2	-0.599886
chr18	56957270	56957469	56957369	ENSG00000212539.2	+	snoRNA	NOVEL	U3	1	1	-0.617822
chr18	57027832	57038845	57033338	ENSG00000267225.1	+	sense_overlapping	KNOWN	WDR7-OT1	1	3	-0.111763
chr18	57054559	57072119	57063339	ENSG00000258609.2	-	lincRNA	KNOWN	LINC-ROR	1	4	0.240538
chr18	57136322	57146998	57141660	ENSG00000267789.1	-	lincRNA	KNOWN	CTD-2526M8.3	1	3	-0.203136
chr18	57147062	57150300	57148681	ENSG00000228075.4	+	protein_coding	KNOWN	BOD1L2	1	1	-0.204279
chr18	57169615	57171194	57170404	ENSG00000267726.1	-	lincRNA	KNOWN	CTD-2526M8.2	1	2	-0.300415
chr18	57284602	57284708	57284655	ENSG00000202240.1	-	snRNA	KNOWN	RNU6-737P	1	1	-0.262016
chr18	57350813	57371731	57361272	ENSG00000177511.5	+	protein_coding	KNOWN	ST8SIA3	3	4	-0.135859
chr18	57427133	57432112	57429622	ENSG00000277837.1	+	lincRNA	KNOWN	RP11-714M23.2	1	1	-0.315368
chr18	57435685	57491297	57463491	ENSG00000119547.5	+	protein_coding	KNOWN	ONECUT2	2	3	-0.032641
chr18	57435821	57435880	57435850	ENSG00000266636.1	+	miRNA	NOVEL	AC090340.1	1	1	-0.029999
chr18	57548283	57586772	57567527	ENSG00000066926.10	-	protein_coding	KNOWN	FECH	10	11	-0.025086
chr18	57588611	57589091	57588851	ENSG00000278703.1	-	lincRNA	KNOWN	RP11-706P11.2	1	1	-0.107042
chr18	57600656	57622213	57611434	ENSG00000134440.11	-	protein_coding	KNOWN	NARS	12	14	0.124976
chr18	57630302	57669296	57649799	ENSG00000267040.6	+	antisense	KNOWN	RP11-35G9.3	3	3	0.259243
chr18	57639455	57738044	57688749	ENSG00000267787.5	+	antisense	KNOWN	RP11-35G9.5	2	6	0.339134
chr18	57646426	57803101	57724763	ENSG00000081923.10	-	protein_coding	KNOWN	ATP8B1	6	28	0.267662
chr18	57755394	57755500	57755447	ENSG00000202159.1	+	snRNA	KNOWN	RNU6-742P	1	1	0.033098
chr18	57838476	57838966	57838721	ENSG00000231544.3	+	processed_pseudogene	KNOWN	RSL24D1P11	1	1	0.005835
chr18	57961231	57964434	57962832	ENSG00000267209.5	-	lincRNA	KNOWN	RP11-693L9.2	3	3	-0.193208
chr18	58016784	58016884	58016834	ENSG00000265200.1	-	miRNA	NOVEL	AC090324.1	1	1	-0.035622
chr18	58018794	58019061	58018927	ENSG00000235028.3	-	processed_pseudogene	KNOWN	HMGN1P30	1	1	-0.035622
chr18	58044367	58401540	58222953	ENSG00000049759.16	+	protein_coding	KNOWN	NEDD4L	37	31	0.107742
chr18	58189834	58195696	58192765	ENSG00000267743.5	-	antisense	KNOWN	RP11-718I15.1	2	3	0.208324
chr18	58371566	58372666	58372116	ENSG00000267504.1	+	sense_intronic	KNOWN	RP11-845C23.2	1	1	0.098718
chr18	58398663	58400082	58399372	ENSG00000267396.1	-	antisense	KNOWN	RP11-845C23.3	1	2	-0.101649
chr18	58416765	58417628	58417196	ENSG00000267675.1	+	lincRNA	KNOWN	RP11-1151B14.2	1	2	0.343531
chr18	58446275	58453766	58450020	ENSG00000267391.2	+	lincRNA	KNOWN	RP11-1151B14.3	1	2	0.275513
chr18	58451068	58451176	58451122	ENSG00000207778.2	+	miRNA	KNOWN	MIR122	1	1	0.185566
chr18	58476191	58477484	58476837	ENSG00000276403.1	+	lincRNA	KNOWN	RP11-1151B14.1	1	1	0.172365
chr18	58481247	58628957	58555102	ENSG00000198796.6	-	protein_coding	KNOWN	ALPK2	6	13	0.266327
chr18	58511598	58512310	58511954	ENSG00000274354.1	-	sense_intronic	KNOWN	RP11-1151B14.5	1	1	0.209124
chr18	58535415	58538552	58536983	ENSG00000267257.1	+	antisense	KNOWN	RP11-1151B14.4	1	2	0.277684
chr18	58557070	58566677	58561873	ENSG00000267579.1	+	antisense	KNOWN	RP11-126O1.2	1	2	0.326457
chr18	58600631	58600698	58600664	ENSG00000252284.1	+	snoRNA	NOVEL	SNORD28	1	1	0.340736
chr18	58631259	58632120	58631689	ENSG00000239659.2	+	processed_pseudogene	KNOWN	RPL9P31	1	2	0.179455
chr18	58659858	58660524	58660191	ENSG00000275418.1	+	lincRNA	KNOWN	RP11-126O1.6	1	2	0.165158
chr18	58670009	58671877	58670943	ENSG00000267226.2	-	antisense	KNOWN	RP11-126O1.5	1	2	0.375785
chr18	58671386	58754477	58712931	ENSG00000172175.12	+	protein_coding	KNOWN	MALT1	5	17	0.200387
chr18	58672613	58752730	58712671	ENSG00000267476.1	-	antisense	KNOWN	RP11-126O1.4	2	4	0.192245
chr18	58690356	58692153	58691254	ENSG00000266946.1	+	processed_pseudogene	KNOWN	MRPL37P1	1	2	0.281470
chr18	58752179	58753898	58753038	ENSG00000267705.1	-	lincRNA	KNOWN	RP11-108P20.3	1	2	0.450623
chr18	58754859	58757842	58756350	ENSG00000267501.1	-	lincRNA	KNOWN	RP11-108P20.2	1	2	0.450623
chr18	58805268	58805374	58805321	ENSG00000201598.1	+	snRNA	KNOWN	RNU6-219P	1	1	0.452809
chr18	58813880	58834364	58824122	ENSG00000267593.1	+	lincRNA	KNOWN	RP11-108P20.4	1	3	0.158616
chr18	58818883	58819016	58818949	ENSG00000199713.1	-	snoRNA	NOVEL	U8	1	1	0.099371
chr18	58862600	58986480	58924540	ENSG00000074657.13	+	protein_coding	KNOWN	ZNF532	26	11	0.270303
chr18	58926197	58926296	58926246	ENSG00000251870.1	-	snRNA	KNOWN	RNU2-69P	1	1	0.305395
chr18	58996734	59069338	59033036	ENSG00000224367.6	+	unitary_pseudogene	KNOWN	OACYLP	4	18	0.379819
chr18	59081924	59084981	59083452	ENSG00000267215.1	+	lincRNA	KNOWN	RP11-685A21.1	2	3	0.438723
chr18	59139477	59158836	59149156	ENSG00000166562.8	+	protein_coding	KNOWN	SEC11C	8	6	-0.001949
chr18	59220168	59230774	59225471	ENSG00000134443.9	+	protein_coding	KNOWN	GRP	5	3	-0.263229
chr18	59267035	59274086	59270560	ENSG00000134438.9	-	protein_coding	KNOWN	RAX	4	3	0.008373
chr18	59275156	59318649	59296902	ENSG00000166569.8	-	protein_coding	KNOWN	CPLX4	2	3	0.056849
chr18	59327823	59359962	59343892	ENSG00000074695.5	-	protein_coding	KNOWN	LMAN1	5	13	-0.101045
chr18	59360700	59386749	59373724	ENSG00000267677.1	+	lincRNA	KNOWN	RP11-27G24.1	1	2	-0.040561
chr18	59430940	59697380	59564160	ENSG00000183287.13	-	protein_coding	KNOWN	CCBE1	4	11	0.220747
chr18	59459072	59465682	59462377	ENSG00000267000.1	+	antisense	KNOWN	RP11-27G24.3	1	5	-0.024105
chr18	59563709	59568615	59566162	ENSG00000267061.1	+	antisense	KNOWN	RP11-760L24.1	1	3	0.069272
chr18	59685820	59688400	59687110	ENSG00000267269.1	+	antisense	KNOWN	RP11-2N1.1	1	2	0.446769
chr18	59696459	59698111	59697285	ENSG00000267774.2	+	antisense	KNOWN	RP11-2N1.2	1	2	0.276114
chr18	59700523	59700946	59700734	ENSG00000273664.1	+	lincRNA	KNOWN	RP11-2N1.3	1	1	0.276114
chr18	59749677	59749757	59749717	ENSG00000221471.1	+	miRNA	NOVEL	AC098847.1	1	1	0.437320
chr18	59761558	59761905	59761731	ENSG00000224161.3	+	processed_pseudogene	KNOWN	RPS26P54	1	1	-0.297714
chr18	59778572	59778989	59778780	ENSG00000267486.1	+	processed_pseudogene	KNOWN	GLUD1P4	1	1	0.295084
chr18	59821040	59825261	59823150	ENSG00000267669.1	+	transcribed_processed_pseudogene	KNOWN	RP11-824M15.3	2	2	0.003554
chr18	59899948	59904306	59902127	ENSG00000141682.11	+	protein_coding	KNOWN	PMAIP1	3	3	-0.093875
chr18	59929226	59930330	59929778	ENSG00000267066.1	+	processed_pseudogene	KNOWN	RP11-866E20.1	1	3	0.047998
chr18	59969438	59971396	59970417	ENSG00000267497.1	+	processed_pseudogene	KNOWN	NFE2L3P1	1	1	-0.107601
chr18	59972914	59973207	59973060	ENSG00000239398.3	+	misc_RNA	KNOWN	RN7SL342P	1	1	-0.087987
chr18	60009994	60011143	60010568	ENSG00000256704.3	-	processed_pseudogene	KNOWN	SDCCAG3P1	1	1	-0.332261
chr18	60010281	60014258	60012269	ENSG00000267462.1	+	lincRNA	KNOWN	RP11-866E20.3	1	3	-0.331409
chr18	60016778	60017441	60017109	ENSG00000267742.1	-	processed_pseudogene	KNOWN	FAM60CP	1	1	-0.331409
chr18	60018625	60018731	60018678	ENSG00000252555.1	+	snRNA	KNOWN	RNU6-567P	1	1	-0.331409
chr18	60125033	60161195	60143114	ENSG00000267686.1	+	lincRNA	KNOWN	RP11-795H16.3	1	3	-0.726122
chr18	60149576	60150365	60149970	ENSG00000242060.1	+	processed_pseudogene	KNOWN	RPS3AP49	1	1	-0.757739
chr18	60163567	60163707	60163637	ENSG00000202468.1	+	snRNA	KNOWN	RNU4-17P	1	1	-0.866188
chr18	60196555	60198172	60197363	ENSG00000267620.1	+	processed_pseudogene	KNOWN	RP11-795H16.2	1	1	-0.178097
chr18	60294151	60301118	60297634	ENSG00000267401.1	+	lincRNA	KNOWN	RP11-396N11.1	1	3	-0.939035
chr18	60371110	60372775	60371942	ENSG00000166603.4	-	protein_coding	KNOWN	MC4R	1	1	-0.626237
chr18	60495868	60496336	60496102	ENSG00000267400.1	-	processed_pseudogene	KNOWN	RP11-325K19.3	1	2	-0.517693
chr18	60519841	60520165	60520003	ENSG00000266915.1	+	processed_pseudogene	KNOWN	MRPS5P4	1	1	-0.573024
chr18	60525616	60526156	60525886	ENSG00000267687.1	-	processed_pseudogene	KNOWN	RP11-325K19.6	1	1	-0.573024
chr18	60555143	60555224	60555183	ENSG00000253011.1	+	miRNA	NOVEL	AC010928.1	1	1	-0.252273
chr18	60611773	60654623	60633198	ENSG00000267382.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-325K19.2	2	12	-0.644983
chr18	60630167	60902726	60766446	ENSG00000267098.1	-	lincRNA	KNOWN	RP11-325K19.1	1	8	-0.585696
chr18	60663115	60664369	60663742	ENSG00000267153.1	+	processed_pseudogene	KNOWN	CTBP2P3	1	1	-0.400712
chr18	60794613	60794916	60794764	ENSG00000267513.3	-	processed_pseudogene	KNOWN	RP11-622J9.1	1	1	-0.366299
chr18	61333582	61555773	61444677	ENSG00000101542.9	+	protein_coding	KNOWN	CDH20	4	12	-0.449253
chr18	61391595	61391703	61391649	ENSG00000206769.1	+	snRNA	KNOWN	RNU6-116P	1	1	-0.402773
chr18	61404858	61405205	61405031	ENSG00000243256.1	-	processed_pseudogene	KNOWN	RPL30P14	1	1	-0.402773
chr18	61571342	61579456	61575399	ENSG00000267316.5	-	lincRNA	KNOWN	RP11-879F14.3	2	5	-0.249045
chr18	61585746	61606916	61596331	ENSG00000267279.1	-	lincRNA	KNOWN	RP11-879F14.2	2	5	0.111942
chr18	61592375	61748832	61670603	ENSG00000267175.5	-	lincRNA	KNOWN	RP11-879F14.1	3	4	-0.005968
chr18	61681653	61682695	61682174	ENSG00000267038.1	+	lincRNA	KNOWN	RP11-1096D5.2	1	2	-0.308249
chr18	61748176	61756646	61752411	ENSG00000260440.2	+	lincRNA	KNOWN	LINC01544	1	4	0.065210
chr18	61808063	61894247	61851155	ENSG00000176641.10	-	protein_coding	KNOWN	RNF152	5	4	0.030886
chr18	61957273	61958014	61957643	ENSG00000267597.1	-	processed_pseudogene	KNOWN	RPIAP1	1	1	0.408965
chr18	62043567	62187118	62115342	ENSG00000197563.9	-	protein_coding	KNOWN	PIGN	20	31	-0.244627
chr18	62187258	62307829	62247543	ENSG00000134444.13	+	protein_coding	KNOWN	KIAA1468	12	30	-0.381449
chr18	62245810	62247412	62246611	ENSG00000266900.1	+	sense_intronic	KNOWN	RP11-173A16.2	1	1	-0.899395
chr18	62300036	62300998	62300517	ENSG00000267560.1	-	antisense	KNOWN	RP11-173A16.1	1	2	-0.031240
chr18	62325287	62391292	62358289	ENSG00000141655.15	+	protein_coding	KNOWN	TNFRSF11A	6	10	0.001364
chr18	62330812	62330913	62330862	ENSG00000199867.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.226789
chr18	62372894	62378130	62375512	ENSG00000267341.1	-	antisense	KNOWN	RP11-640A1.3	1	3	-0.155021
chr18	62415678	62416227	62415952	ENSG00000241088.2	+	processed_pseudogene	KNOWN	RPL17P44	1	1	-0.042494
chr18	62418318	62418576	62418447	ENSG00000267487.1	+	processed_pseudogene	KNOWN	RP11-640A1.4	1	1	-0.042494
chr18	62442028	62443126	62442577	ENSG00000266920.1	+	processed_pseudogene	KNOWN	ACTBP9	1	1	-0.148323
chr18	62523007	62587709	62555358	ENSG00000141664.9	+	protein_coding	KNOWN	ZCCHC2	11	15	-0.144681
chr18	62525919	62526325	62526122	ENSG00000278017.1	-	antisense	KNOWN	RP11-120K19.4	1	1	-0.261645
chr18	62551203	62552505	62551854	ENSG00000279236.1	+	TEC	KNOWN	RP11-120K19.3	1	1	-0.094104
chr18	62650308	62650601	62650454	ENSG00000243549.3	-	misc_RNA	KNOWN	RN7SL705P	1	1	-0.360076
chr18	62715450	62980433	62847941	ENSG00000081913.13	+	protein_coding	KNOWN	PHLPP1	7	17	-0.106572
chr18	62731226	62731332	62731279	ENSG00000206746.1	-	snRNA	KNOWN	RNU6-142P	1	1	0.073730
chr18	63123346	63320128	63221737	ENSG00000171791.12	-	protein_coding	KNOWN	BCL2	4	3	-0.100923
chr18	63151114	63151320	63151217	ENSG00000267766.1	-	sense_intronic	KNOWN	RP11-299P2.1	1	1	-0.120229
chr18	63207622	63208168	63207895	ENSG00000283125.1	+	antisense	KNOWN	RP11-299P2.2	1	1	-0.261645
chr18	63327726	63367510	63347618	ENSG00000119537.15	-	protein_coding	KNOWN	KDSR	12	10	0.190384
chr18	63367328	63381629	63374478	ENSG00000267390.1	+	antisense	KNOWN	RP11-635N19.1	1	2	0.279208
chr18	63389190	63422483	63405836	ENSG00000119541.9	-	protein_coding	KNOWN	VPS4B	7	11	-0.166742
chr18	63415317	63416469	63415893	ENSG00000267430.1	-	processed_pseudogene	KNOWN	RP11-635N19.2	1	1	-0.211077
chr18	63476761	63505085	63490923	ENSG00000206075.13	+	protein_coding	KNOWN	SERPINB5	6	7	0.004009
chr18	63485601	63486018	63485809	ENSG00000269989.1	+	sense_intronic	KNOWN	RP11-635N19.3	1	1	-0.145337
chr18	63496989	63497400	63497194	ENSG00000214318.3	+	processed_pseudogene	KNOWN	ATP5G1P6	1	1	0.135061
chr18	63556160	63567011	63561585	ENSG00000166634.6	+	protein_coding	KNOWN	SERPINB12	2	7	-0.126188
chr18	63586989	63604639	63595814	ENSG00000197641.11	+	protein_coding	KNOWN	SERPINB13	6	9	-0.110842
chr18	63637259	63644298	63640778	ENSG00000206073.10	-	protein_coding	KNOWN	SERPINB4	4	8	-0.164107
chr18	63637719	63661963	63649841	ENSG00000057149.14	-	protein_coding	KNOWN	SERPINB3	3	8	-0.219937
chr18	63647579	63726432	63687005	ENSG00000206072.12	+	protein_coding	KNOWN	SERPINB11	9	10	-0.061095
chr18	63752935	63805376	63779155	ENSG00000166396.12	+	protein_coding	KNOWN	SERPINB7	7	8	-0.047333
chr18	63871692	63903890	63887791	ENSG00000197632.8	+	protein_coding	KNOWN	SERPINB2	6	9	0.128658
chr18	63897174	63936111	63916642	ENSG00000242550.5	+	protein_coding	KNOWN	SERPINB10	4	8	-0.017227
chr18	63949301	63981774	63965537	ENSG00000221887.5	+	protein_coding	KNOWN	HMSD	4	6	0.071252
chr18	63969925	64005667	63987796	ENSG00000166401.13	+	protein_coding	KNOWN	SERPINB8	8	7	0.152620
chr18	64072158	64072653	64072405	ENSG00000237314.2	+	processed_pseudogene	KNOWN	RPL12P39	1	1	-0.650210
chr18	64080009	64149030	64114519	ENSG00000179676.6	-	lincRNA	KNOWN	LINC00305	3	4	-0.588158
chr18	64104091	64423601	64263846	ENSG00000267134.1	+	lincRNA	KNOWN	RP11-146N18.1	1	10	-0.502366
chr18	64147209	64159299	64153254	ENSG00000236392.2	+	lincRNA	KNOWN	AC100848.1	2	3	-0.657635
chr18	64213082	64260055	64236568	ENSG00000266952.1	-	lincRNA	KNOWN	LINC01538	1	3	-0.546874
chr18	64677796	64677993	64677894	ENSG00000275448.1	-	processed_pseudogene	KNOWN	RP11-762J3.1	1	1	-0.710971
chr18	64682136	64682203	64682169	ENSG00000280718.1	-	miRNA	NOVEL	AC027506.1	1	1	-0.710971
chr18	65105873	65125710	65115791	ENSG00000263863.1	-	lincRNA	KNOWN	AC007948.1	1	2	-0.853179
chr18	65186159	65187018	65186588	ENSG00000264131.1	+	lincRNA	KNOWN	AC007631.1	1	2	-0.340968
chr18	65424013	65447512	65435762	ENSG00000264232.1	+	lincRNA	KNOWN	RP11-453M23.1	1	3	-0.772368
chr18	65606090	65652053	65629071	ENSG00000265217.1	+	lincRNA	KNOWN	RP11-775G23.1	1	4	-0.508424
chr18	65750252	65890341	65820296	ENSG00000081138.13	+	protein_coding	KNOWN	CDH7	4	12	-0.543739
chr18	65865262	65866397	65865829	ENSG00000263720.1	+	sense_intronic	KNOWN	RP11-389J22.1	1	2	-0.609667
chr18	65917782	65920942	65919362	ENSG00000263622.1	-	lincRNA	KNOWN	RP11-389J22.3	1	2	-0.749746
chr18	66068750	66069647	66069198	ENSG00000264685.1	-	processed_pseudogene	KNOWN	PRPF19P1	1	1	-0.846608
chr18	66501083	66604138	66552610	ENSG00000071991.8	-	protein_coding	KNOWN	CDH19	5	12	-0.816241
chr18	66653409	66653501	66653455	ENSG00000221536.1	-	miRNA	NOVEL	AC091643.1	1	1	-0.759486
chr18	66946116	66946222	66946169	ENSG00000238680.1	+	snRNA	KNOWN	RNU6-1037P	1	1	-0.848769
chr18	67081584	67081686	67081635	ENSG00000263354.1	+	miRNA	KNOWN	MIR5011	1	1	-0.663470
chr18	67137611	67137751	67137681	ENSG00000264054.1	-	processed_pseudogene	KNOWN	RPL31P9	1	1	-0.308546
chr18	67296282	67296382	67296332	ENSG00000281905.1	+	miRNA	NOVEL	AC091042.1	1	1	-0.325676
chr18	67375133	67375305	67375219	ENSG00000265936.1	+	processed_pseudogene	KNOWN	RP11-563H6.1	1	1	-0.196439
chr18	67481791	67484966	67483378	ENSG00000260578.1	-	lincRNA	KNOWN	CTD-2541J13.1	1	1	-0.423773
chr18	67506582	67516980	67511781	ENSG00000171451.13	-	protein_coding	KNOWN	DSEL	1	2	-0.111969
chr18	67506589	67514030	67510309	ENSG00000263424.1	+	antisense	KNOWN	CTD-2541J13.2	2	2	-0.212180
chr18	67516546	67899619	67708082	ENSG00000265533.1	+	lincRNA	KNOWN	RP11-638L3.1	1	5	-0.274458
chr18	67602692	67603022	67602857	ENSG00000264040.1	-	processed_pseudogene	KNOWN	RP11-29O13.1	1	1	-0.103139
chr18	67672221	67676078	67674149	ENSG00000263594.1	-	lincRNA	KNOWN	RP11-28O3.2	1	3	0.082714
chr18	67707929	67708246	67708087	ENSG00000265472.1	-	processed_pseudogene	KNOWN	RP11-28O3.1	1	1	-0.117462
chr18	67788268	67791035	67789651	ENSG00000264104.1	-	processed_pseudogene	KNOWN	RP11-638L3.4	1	2	-0.482370
chr18	67808505	67814822	67811663	ENSG00000265555.1	-	lincRNA	KNOWN	RP11-638L3.3	1	2	-0.337971
chr18	67830671	67831967	67831319	ENSG00000265240.1	-	processed_pseudogene	KNOWN	RP11-638L3.2	1	1	-0.187531
chr18	67940949	67956426	67948687	ENSG00000264634.1	+	lincRNA	KNOWN	RP11-659F24.1	1	3	-0.374076
chr18	68102116	68114377	68108246	ENSG00000264869.1	+	lincRNA	KNOWN	RP11-526H11.1	1	4	-0.157261
chr18	68258339	68264827	68261583	ENSG00000264699.1	-	lincRNA	KNOWN	RP11-421N8.2	1	5	-0.164348
chr18	68277802	68278243	68278022	ENSG00000260747.1	-	processed_pseudogene	KNOWN	RP11-421N8.1	1	1	-0.200985
chr18	68427030	68436918	68431974	ENSG00000265425.1	+	lincRNA	KNOWN	RP11-128D14.1	1	4	-0.115524
chr18	68455951	68456877	68456414	ENSG00000263355.1	+	processed_pseudogene	KNOWN	AKR1B10P2	1	1	-0.086978
chr18	68527970	68528123	68528046	ENSG00000264697.1	+	processed_pseudogene	KNOWN	RP11-585K6.2	1	1	-0.134779
chr18	68673688	68715298	68694493	ENSG00000166479.9	-	protein_coding	KNOWN	TMX3	14	16	-0.282021
chr18	68715209	69055189	68885199	ENSG00000150636.15	+	protein_coding	KNOWN	CCDC102B	13	8	-0.624844
chr18	68721082	68721560	68721321	ENSG00000276092.1	+	sense_intronic	KNOWN	RP11-734B5.2	1	1	-0.175781
chr18	68753179	68754583	68753881	ENSG00000263637.1	-	antisense	KNOWN	RP11-106E15.1	1	2	-0.453004
chr18	68858934	68859040	68858987	ENSG00000207072.1	+	snRNA	KNOWN	RNU6-39P	1	1	-0.773079
chr18	68866517	68867028	68866772	ENSG00000264444.1	+	processed_pseudogene	KNOWN	SDHCP1	1	1	-0.773079
chr18	68899781	68902255	68901018	ENSG00000264472.4	-	antisense	KNOWN	RP11-861L17.3	2	2	-1.202751
chr18	68908048	68908599	68908323	ENSG00000273584.1	+	sense_intronic	KNOWN	RP11-861L17.4	1	1	-1.202751
chr18	68992718	68993375	68993046	ENSG00000264236.1	-	processed_pseudogene	KNOWN	RP11-861L17.2	1	1	-0.269274
chr18	69212277	69214350	69213313	ENSG00000264705.1	+	lincRNA	KNOWN	RP11-674P19.2	1	1	-0.665438
chr18	69398726	69399249	69398987	ENSG00000278532.1	-	lincRNA	KNOWN	RP11-17E3.1	1	1	-0.422581
chr18	69401055	69849087	69625071	ENSG00000206052.10	+	protein_coding	KNOWN	DOK6	5	8	-0.495773
chr18	69469517	69471736	69470626	ENSG00000264845.2	+	transcribed_processed_pseudogene	KNOWN	RP11-465I4.3	2	2	-0.465640
chr18	69483627	69618694	69551160	ENSG00000265643.1	-	antisense	KNOWN	RP11-465I4.2	1	3	-0.511100
chr18	69659837	69663413	69661625	ENSG00000279221.1	+	TEC	KNOWN	RP11-543H23.1	1	1	-0.395057
chr18	69704978	69724975	69714976	ENSG00000266840.1	-	antisense	KNOWN	RP11-543H23.2	1	3	-0.499271
chr18	69831158	69961803	69896480	ENSG00000150637.8	-	protein_coding	KNOWN	CD226	8	7	-0.250103
chr18	70003793	70205945	70104869	ENSG00000176225.12	-	protein_coding	KNOWN	RTTN	11	49	-0.177530
chr18	70288901	70330200	70309550	ENSG00000170677.5	+	protein_coding	KNOWN	SOCS6	3	2	0.188862
chr18	70335439	70352459	70343949	ENSG00000266258.1	+	lincRNA	KNOWN	RP11-41O4.1	2	4	0.072479
chr18	70335929	70337310	70336619	ENSG00000266304.1	-	lincRNA	KNOWN	RP11-484N16.1	1	2	0.074918
chr18	70380140	70384591	70382365	ENSG00000266278.1	-	lincRNA	KNOWN	RP11-41O4.2	1	3	0.280437
chr18	70412055	70412391	70412223	ENSG00000265698.1	+	processed_pseudogene	KNOWN	LARP7P3	1	1	0.676954
chr18	70430231	70431125	70430678	ENSG00000214255.5	+	processed_pseudogene	KNOWN	RPS2P6	1	1	-0.128057
chr18	70489630	70491205	70490417	ENSG00000278971.1	+	TEC	KNOWN	RP11-644A7.2	1	1	-0.294035
chr18	70512727	70513008	70512867	ENSG00000239748.3	+	misc_RNA	KNOWN	RN7SL795P	1	1	-0.255932
chr18	70630534	70650744	70640639	ENSG00000263417.4	-	lincRNA	KNOWN	GTSCR1	1	3	-0.321005
chr18	71000477	71011490	71005983	ENSG00000265781.1	-	lincRNA	KNOWN	RP11-384E22.1	1	3	-0.257209
chr18	71028770	71033056	71030913	ENSG00000265639.1	+	processed_pseudogene	KNOWN	RP11-529J17.1	1	2	-0.430072
chr18	71216704	71237102	71226903	ENSG00000265484.1	-	lincRNA	KNOWN	RP11-47G4.2	1	4	-0.508197
chr18	71225704	71226721	71226212	ENSG00000263733.1	+	processed_pseudogene	KNOWN	RP11-47G4.1	1	1	-0.561086
chr18	71519962	71578956	71549459	ENSG00000260676.5	-	lincRNA	KNOWN	LINC01541	2	7	-0.664697
chr18	71588537	71588884	71588710	ENSG00000264388.1	+	processed_pseudogene	KNOWN	RP11-752P2.1	1	1	-0.507185
chr18	71665148	71665525	71665336	ENSG00000265946.1	+	processed_pseudogene	KNOWN	RP11-752P2.2	1	1	-0.567779
chr18	71732615	71788128	71760371	ENSG00000265352.1	-	lincRNA	KNOWN	RP11-723G8.2	3	5	-0.689865
chr18	71837039	71870788	71853913	ENSG00000260457.2	+	lincRNA	KNOWN	RP11-723G8.1	1	2	-0.564177
chr18	71890409	71944577	71917493	ENSG00000265995.1	-	lincRNA	KNOWN	RP11-736G13.1	1	3	-0.504005
chr18	71932493	71932796	71932644	ENSG00000271313.1	+	processed_pseudogene	KNOWN	RP11-736G13.2	1	1	-0.558559
chr18	72536680	72638521	72587600	ENSG00000141668.9	-	protein_coding	KNOWN	CBLN2	9	5	-0.373084
chr18	72618267	72619222	72618744	ENSG00000264315.1	+	processed_pseudogene	KNOWN	HNRNPA1P11	1	1	-0.243799
chr18	72742314	72868146	72805230	ENSG00000166342.18	-	protein_coding	KNOWN	NETO1	7	11	-0.581356
chr18	72743756	72745961	72744858	ENSG00000265579.1	-	sense_intronic	KNOWN	RP11-713C5.1	1	1	-0.422581
chr18	72751952	72752051	72752001	ENSG00000252598.1	+	rRNA	KNOWN	RNA5SP460	1	1	-1.022179
chr18	72853321	72853382	72853351	ENSG00000263750.1	-	miRNA	KNOWN	MIR548AV	1	1	-0.507692
chr18	72868388	72881399	72874893	ENSG00000263958.1	+	lincRNA	KNOWN	RP11-676J15.1	2	3	-0.107517
chr18	73151241	73264480	73207860	ENSG00000263711.5	-	processed_transcript	KNOWN	RP11-169F17.1	6	10	-0.339467
chr18	73324941	73349878	73337409	ENSG00000261780.2	+	processed_transcript	KNOWN	CTD-2354A18.1	3	3	-0.543994
chr18	73711329	73715490	73713409	ENSG00000265380.1	-	lincRNA	KNOWN	RP11-126K15.1	1	3	-0.030264
chr18	73744935	73745232	73745083	ENSG00000241866.3	+	misc_RNA	KNOWN	RN7SL401P	1	1	-0.345886
chr18	73914405	74034161	73974283	ENSG00000263655.1	-	lincRNA	KNOWN	RP11-25L3.3	1	3	-0.113292
chr18	73921939	73922631	73922285	ENSG00000278902.1	-	TEC	KNOWN	RP11-25L3.1	1	1	-0.292926
chr18	74073353	74147865	74110609	ENSG00000141665.11	-	protein_coding	KNOWN	FBXO15	13	10	-0.248785
chr18	74148511	74160530	74154520	ENSG00000075336.11	+	protein_coding	KNOWN	TIMM21	6	6	0.020153
chr18	74211391	74240555	74225973	ENSG00000260569.2	-	lincRNA	KNOWN	RP11-669I1.1	2	2	0.030506
chr18	74227506	74227803	74227654	ENSG00000243856.3	+	misc_RNA	KNOWN	RN7SL551P	1	1	-0.074367
chr18	74250847	74292016	74271431	ENSG00000166347.18	-	protein_coding	KNOWN	CYB5A	7	6	-0.005211
chr18	74315813	74359187	74337500	ENSG00000206043.6	+	protein_coding	KNOWN	C18orf63	1	14	-0.303971
chr18	74389884	74390297	74390090	ENSG00000235297.3	-	processed_pseudogene	KNOWN	FAUP1	1	1	0.089211
chr18	74409415	74413209	74411312	ENSG00000259779.1	+	lincRNA	KNOWN	RP11-231E4.2	2	2	0.039379
chr18	74434099	74457944	74446021	ENSG00000187773.8	-	protein_coding	KNOWN	FAM69C	2	4	-0.029965
chr18	74495816	74523454	74509635	ENSG00000133313.14	+	protein_coding	KNOWN	CNDP2	29	12	0.145879
chr18	74504766	74505248	74505007	ENSG00000276934.1	+	sense_intronic	KNOWN	RP11-231E4.5	1	1	0.139298
chr18	74534440	74587212	74560826	ENSG00000150656.14	+	protein_coding	KNOWN	CNDP1	7	12	0.229412
chr18	74561381	74562100	74561740	ENSG00000264340.1	-	antisense	KNOWN	RP11-231E4.3	1	2	0.293290
chr18	74591774	74598508	74595141	ENSG00000264247.1	-	lincRNA	KNOWN	LINC00909	4	2	-0.067486
chr18	74597870	75065671	74831770	ENSG00000215421.9	+	protein_coding	KNOWN	ZNF407	8	8	-0.229847
chr18	74821126	74821220	74821173	ENSG00000252330.2	+	miRNA	NOVEL	AC023380.1	1	1	-0.279518
chr18	75070197	75071091	75070644	ENSG00000278607.1	-	lincRNA	KNOWN	RP11-405M12.3	1	3	0.294571
chr18	75073543	75074205	75073874	ENSG00000273669.1	+	lincRNA	KNOWN	RP11-405M12.4	1	1	0.294571
chr18	75103587	75106260	75104923	ENSG00000278911.1	-	TEC	KNOWN	RP11-405M12.2	1	1	-0.122452
chr18	75195108	75209348	75202228	ENSG00000180011.6	-	protein_coding	KNOWN	ZADH2	4	2	0.004529
chr18	75210755	75289950	75250352	ENSG00000179981.9	+	protein_coding	KNOWN	TSHZ1	5	3	0.221844
chr18	75387056	75387596	75387326	ENSG00000276993.1	+	lincRNA	KNOWN	RP11-321M21.4	1	1	-0.010578
chr18	75407012	75419040	75413026	ENSG00000264116.4	+	antisense	KNOWN	RP11-321M21.3	2	5	0.057195
chr18	75409476	75427703	75418589	ENSG00000206026.7	-	protein_coding	KNOWN	SMIM21	3	3	0.047026
chr18	75432703	75436957	75434830	ENSG00000266774.1	-	lincRNA	KNOWN	RP11-321M21.1	1	2	-0.195905
chr18	75696079	75712385	75704232	ENSG00000261194.1	-	lincRNA	KNOWN	RP11-704C2.1	1	2	-0.129374
chr18	75753580	75753665	75753622	ENSG00000277497.1	-	miRNA	NOVEL	AC090338.1	1	1	-0.523185
chr18	75844925	75868252	75856588	ENSG00000266460.1	-	lincRNA	KNOWN	RP11-173L6.1	1	2	-0.319014
chr18	75927836	75928004	75927920	ENSG00000275827.1	+	processed_pseudogene	KNOWN	RP11-1O2.2	1	1	-0.233494
chr18	76008118	76015861	76011989	ENSG00000264108.1	-	lincRNA	KNOWN	RP11-357H3.1	1	2	-0.295852
chr18	76122998	76145255	76134126	ENSG00000263547.1	+	processed_transcript	KNOWN	RP11-1O2.1	2	6	-0.064184
chr18	76173304	76177738	76175521	ENSG00000266743.1	-	lincRNA	KNOWN	RP11-94B19.6	1	2	-0.213353
chr18	76209510	76215702	76212606	ENSG00000264260.1	+	lincRNA	KNOWN	RP11-94B19.1	1	4	-0.138407
chr18	76227990	76233387	76230688	ENSG00000264595.1	-	lincRNA	KNOWN	RP11-94B19.5	1	3	-0.179107
chr18	76247725	76251388	76249556	ENSG00000266014.1	+	lincRNA	KNOWN	RP11-94B19.2	1	2	-0.447001
chr18	76254292	76255214	76254753	ENSG00000265717.1	-	lincRNA	KNOWN	RP11-94B19.7	1	2	-0.795533
chr18	76256891	76258337	76257614	ENSG00000264212.1	+	lincRNA	KNOWN	RP11-94B19.3	1	2	-0.795533
chr18	76259166	76260114	76259640	ENSG00000266614.1	+	lincRNA	KNOWN	RP11-94B19.4	1	2	-0.795533
chr18	76358190	76495190	76426690	ENSG00000101493.10	-	protein_coding	KNOWN	ZNF516	5	7	0.234397
chr18	76372717	76378275	76375496	ENSG00000263982.1	+	antisense	KNOWN	RP11-504I13.3	1	2	0.076562
chr18	76385642	76389406	76387524	ENSG00000280205.1	-	TEC	KNOWN	RP11-504I13.2	1	1	0.076562
chr18	76491652	76493918	76492785	ENSG00000265778.2	+	antisense	KNOWN	RP11-17M16.2	2	2	0.225258
chr18	76495521	76498088	76496804	ENSG00000275763.3	+	lincRNA	KNOWN	C18orf65	1	2	0.225258
chr18	76528655	76610968	76569811	ENSG00000263812.5	+	lincRNA	KNOWN	LINC00908	6	3	0.227035
chr18	76615212	76625940	76620576	ENSG00000266256.1	+	lincRNA	KNOWN	LINC00683	2	2	0.003554
chr18	76623006	76639011	76631008	ENSG00000266312.1	-	lincRNA	KNOWN	RP11-111H3.3	1	5	-0.155089
chr18	76690029	76693636	76691832	ENSG00000276397.1	+	lincRNA	KNOWN	AC034110.1	2	2	-0.049481
chr18	76703444	76704254	76703849	ENSG00000265934.1	-	processed_pseudogene	KNOWN	ARL2BPP1	1	2	-0.049481
chr18	76751305	76751841	76751573	ENSG00000265836.1	+	processed_pseudogene	KNOWN	CCND3P2	1	1	-0.045512
chr18	76759685	76759866	76759775	ENSG00000265626.1	-	processed_pseudogene	KNOWN	AC139085.2	1	1	-0.045512
chr18	76794732	76822295	76808513	ENSG00000264278.1	-	lincRNA	KNOWN	RP11-162A12.2	1	3	0.055493
chr18	76800664	76800774	76800719	ENSG00000252097.1	-	snRNA	KNOWN	RNU6-346P	1	1	0.156481
chr18	76805151	76805736	76805443	ENSG00000278107.1	-	lincRNA	KNOWN	RP11-162A12.4	1	1	0.156481
chr18	76822607	76970727	76896667	ENSG00000130856.15	+	protein_coding	KNOWN	ZNF236	7	32	0.080830
chr18	76834429	76834888	76834658	ENSG00000244229.1	-	processed_pseudogene	KNOWN	RPL26P35	1	1	0.201403
chr18	76840838	76841102	76840970	ENSG00000275355.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.201403
chr18	76884935	76888724	76886829	ENSG00000265261.1	-	processed_pseudogene	KNOWN	RP11-162A12.3	1	4	0.214388
chr18	76974690	76984162	76979426	ENSG00000266844.1	+	antisense	KNOWN	RP11-862L9.3	6	3	0.215623
chr18	76978827	77133683	77056255	ENSG00000197971.14	-	protein_coding	KNOWN	MBP	48	9	0.058653
chr18	77002849	77006846	77004847	ENSG00000279811.1	-	TEC	KNOWN	RP11-862L9.2	1	1	0.202045
chr18	77093086	77093446	77093266	ENSG00000275178.1	+	antisense	KNOWN	RP11-4B16.3	1	1	-0.015454
chr18	77108284	77110537	77109410	ENSG00000279433.1	-	TEC	KNOWN	RP11-4B16.1	1	1	0.057515
chr18	77112602	77115726	77114164	ENSG00000278330.1	+	antisense	KNOWN	RP11-4B16.4	2	2	0.290119
chr18	77180106	77235430	77207768	ENSG00000265844.1	+	lincRNA	KNOWN	RP11-751H17.1	1	5	-0.103652
chr18	77250549	77277896	77264222	ENSG00000166573.5	+	protein_coding	KNOWN	GALR1	2	3	-0.168985
chr18	77421619	77560763	77491191	ENSG00000264015.1	+	lincRNA	KNOWN	RP11-176N18.2	1	3	-0.307422
chr18	77431563	77431689	77431626	ENSG00000199392.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.441227
chr18	77435253	77437242	77436247	ENSG00000264736.1	-	processed_pseudogene	KNOWN	BDP1P	1	1	-0.441227
chr18	77622552	77624515	77623533	ENSG00000264693.1	+	lincRNA	KNOWN	RP11-63N3.1	1	2	-0.002224
chr18	77632928	77633360	77633144	ENSG00000271702.1	-	processed_pseudogene	KNOWN	RP11-63N3.2	1	2	-0.238981
chr18	77863464	77863567	77863515	ENSG00000252260.1	-	rRNA	KNOWN	RNA5SP461	1	1	-0.151934
chr18	77971294	77993722	77982508	ENSG00000265843.2	-	lincRNA	KNOWN	LINC01029	4	4	0.002006
chr18	77983020	77986610	77984815	ENSG00000264334.1	-	lincRNA	KNOWN	RP11-671C19.2	1	2	0.044943
chr18	78036739	78036845	78036792	ENSG00000199728.1	+	snRNA	KNOWN	RNU6-655P	1	1	-0.285765
chr18	78137223	78140887	78139055	ENSG00000266213.1	+	lincRNA	KNOWN	RP11-100K18.1	1	2	-0.042145
chr18	78480549	78484867	78482708	ENSG00000265644.1	+	lincRNA	KNOWN	RP11-451L19.1	1	3	-0.450705
chr18	78505165	78506410	78505787	ENSG00000265378.1	+	lincRNA	KNOWN	RP11-123I22.1	1	2	0.119871
chr18	78544095	78544188	78544141	ENSG00000201723.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.224616
chr18	78795612	78796672	78796142	ENSG00000266273.1	-	lincRNA	KNOWN	RP11-715C4.1	1	2	0.283612
chr18	78908629	78918993	78913811	ENSG00000266586.1	-	lincRNA	KNOWN	CTD-2382H12.2	1	2	0.018332
chr18	78925064	78927441	78926252	ENSG00000265101.1	-	lincRNA	KNOWN	CTD-2382H12.1	1	2	0.024176
chr18	78976555	78979074	78977814	ENSG00000263146.2	-	lincRNA	KNOWN	RP11-849I19.1	4	2	0.468961
chr18	78980275	79002677	78991476	ENSG00000256463.8	+	protein_coding	KNOWN	SALL3	6	5	0.089817
chr18	79069285	79378283	79223784	ENSG00000166377.19	+	protein_coding	KNOWN	ATP9B	26	30	-0.056900
chr18	79085134	79086435	79085784	ENSG00000279416.1	+	TEC	KNOWN	RP11-849I19.2	1	1	0.037249
chr18	79117207	79117920	79117563	ENSG00000267655.1	+	sense_intronic	KNOWN	CTD-2286N8.2	1	1	-0.124820
chr18	79144752	79146918	79145835	ENSG00000279474.1	+	TEC	KNOWN	CTD-2286N8.1	1	1	-0.331220
chr18	79253577	79254856	79254216	ENSG00000267628.1	-	antisense	KNOWN	RP11-1136J12.1	1	2	-0.289879
chr18	79340258	79343972	79342115	ENSG00000267015.1	-	antisense	KNOWN	RP11-800A18.4	1	2	0.132444
chr18	79352458	79354567	79353512	ENSG00000279077.1	+	TEC	KNOWN	RP11-800A18.3	1	1	0.236038
chr18	79395856	79529325	79462590	ENSG00000131196.17	+	protein_coding	KNOWN	NFATC1	18	10	0.461487
chr18	79420836	79422780	79421808	ENSG00000279637.1	+	TEC	KNOWN	RP11-196B3.1	1	1	0.548057
chr18	79470120	79470940	79470530	ENSG00000275186.1	-	antisense	KNOWN	RP11-196B3.3	1	2	0.435197
chr18	79496058	79498348	79497203	ENSG00000279981.1	+	TEC	KNOWN	RP11-196B3.2	1	1	0.342164
chr18	79515798	79516057	79515927	ENSG00000279397.1	-	TEC	KNOWN	RP11-196B3.4	1	1	0.472472
chr18	79576460	79589010	79582735	ENSG00000267287.1	+	processed_transcript	KNOWN	RP11-567M16.1	2	4	0.436751
chr18	79610747	79612303	79611525	ENSG00000267409.1	+	lincRNA	KNOWN	RP11-567M16.2	1	2	0.191147
chr18	79638928	79679745	79659336	ENSG00000178412.4	-	lincRNA	KNOWN	RP11-567M16.3	1	5	0.131092
chr18	79677287	79679358	79678322	ENSG00000274828.1	-	lincRNA	KNOWN	RP11-567M16.6	1	1	-0.019040
chr18	79679801	79756623	79718212	ENSG00000060069.16	+	protein_coding	KNOWN	CTDP1	8	13	0.381875
chr18	79702721	79703651	79703186	ENSG00000266901.1	-	antisense	KNOWN	RP11-567M16.5	1	2	0.327805
chr18	79787121	79791432	79789276	ENSG00000266924.1	+	lincRNA	KNOWN	RP11-154H12.2	1	2	0.414982
chr18	79792726	79816529	79804627	ENSG00000267780.2	+	lincRNA	KNOWN	RP11-154H12.3	1	2	0.392182
chr18	79863668	79900184	79881926	ENSG00000178342.4	+	protein_coding	KNOWN	KCNG2	2	2	0.303897
chr18	79900555	79900903	79900729	ENSG00000278075.1	-	lincRNA	KNOWN	RP11-248M19.1	1	1	0.240272
chr18	79902420	79951664	79927042	ENSG00000122490.18	-	protein_coding	KNOWN	PQLC1	14	6	0.246025
chr18	79964561	79970822	79967691	ENSG00000226742.3	+	protein_coding	KNOWN	HSBP1L1	5	4	0.617045
chr18	79970811	80033949	80002380	ENSG00000141759.14	-	protein_coding	KNOWN	TXNL4A	12	5	0.352846
chr18	80034346	80097088	80065717	ENSG00000267127.6	+	protein_coding	KNOWN	RP11-795F19.5	6	6	0.176705
chr18	80034358	80046397	80040377	ENSG00000101546.12	+	protein_coding	KNOWN	RBFA	5	7	0.126100
chr18	80046900	80095482	80071191	ENSG00000261126.7	+	lincRNA	KNOWN	RP11-795F19.1	4	5	0.193724
chr18	80077707	80078259	80077983	ENSG00000266909.1	+	processed_pseudogene	KNOWN	SLC25A6P4	1	1	0.192021
chr18	80109031	80147523	80128277	ENSG00000101544.8	+	protein_coding	KNOWN	ADNP2	5	4	0.190614
chr18	80147924	80178432	80163178	ENSG00000267270.5	+	antisense	KNOWN	PARD6G-AS1	5	3	0.212965
chr18	80157232	80247546	80202389	ENSG00000178184.15	-	protein_coding	KNOWN	PARD6G	3	3	0.108497
chr18	80161752	80162413	80162082	ENSG00000278000.1	+	sense_intronic	KNOWN	AC139100.4	1	1	0.120420
chr18	80183680	80202992	80193336	ENSG00000267251.2	+	antisense	KNOWN	AC139100.3	2	5	0.267481
chr19	60951	71626	66288	ENSG00000282458.1	-	transcribed_processed_pseudogene	KNOWN	WASH5P	10	3	0.115504
chr19	68403	69178	68790	ENSG00000282542.1	+	TEC	KNOWN	AC008993.2	1	1	0.000000
chr19	69167	69972	69569	ENSG00000282798.1	+	TEC	KNOWN	LLNLR-222A1.1	1	1	0.000000
chr19	71778	72718	72248	ENSG00000282807.1	+	lincRNA	KNOWN	AC008993.3	1	2	0.757837
chr19	71973	72110	72041	ENSG00000275604.1	+	miRNA	KNOWN	MIR1302-11	1	1	0.757837
chr19	76163	77686	76924	ENSG00000282591.1	-	lincRNA	KNOWN	FAM138F	2	3	0.757837
chr19	94062	94974	94518	ENSG00000282137.1	+	unprocessed_pseudogene	KNOWN	OR4G3P	1	1	-0.126543
chr19	104535	105471	105003	ENSG00000267310.1	+	unprocessed_pseudogene	KNOWN	OR4G1P	1	1	-0.126543
chr19	107461	111696	109578	ENSG00000176695.6	+	protein_coding	KNOWN	OR4F17	3	2	-0.203580
chr19	145485	145812	145648	ENSG00000267792.1	+	processed_pseudogene	KNOWN	WBP1LP11	1	1	-0.381462
chr19	156279	157215	156747	ENSG00000266971.1	-	unprocessed_pseudogene	KNOWN	OR4F8P	1	1	0.002724
chr19	176896	177913	177404	ENSG00000282535.1	+	lincRNA	KNOWN	AC092192.1	1	1	-0.201999
chr19	186373	195696	191034	ENSG00000281379.2	-	transcribed_unprocessed_pseudogene	KNOWN	SEPT14P19	3	2	-0.134216
chr19	193239	195595	194417	ENSG00000282059.1	+	processed_pseudogene	KNOWN	CICP19	1	1	-0.091074
chr19	197310	198066	197688	ENSG00000282416.1	-	processed_pseudogene	KNOWN	LLNLF-173C4.2	1	1	-0.091074
chr19	197961	200775	199368	ENSG00000282051.1	+	transcribed_processed_pseudogene	KNOWN	LLNLF-173C4.1	2	2	-0.091074
chr19	198264	239440	218852	ENSG00000282508.1	-	processed_transcript	KNOWN	LINC01002	37	6	0.177931
chr19	200499	201174	200836	ENSG00000282339.1	-	transcribed_processed_pseudogene	KNOWN	LLNLF-176F2.1	1	1	-0.091074
chr19	223158	223261	223209	ENSG00000222329.1	-	snRNA	KNOWN	RNU6-1076P	1	1	0.335721
chr19	248551	251571	250061	ENSG00000282393.1	-	lincRNA	KNOWN	CTD-3113P16.11	1	1	0.133246
chr19	281040	291504	286272	ENSG00000141934.9	-	protein_coding	KNOWN	PLPP2	8	6	0.454107
chr19	301444	344807	323125	ENSG00000105556.10	-	protein_coding	KNOWN	MIER2	6	14	0.980649
chr19	305573	306467	306020	ENSG00000267124.2	+	antisense	KNOWN	CTD-3113P16.5	1	2	0.996067
chr19	361747	376670	369208	ENSG00000105549.10	-	protein_coding	KNOWN	THEG	4	8	0.758650
chr19	397589	399173	398381	ENSG00000267443.2	+	lincRNA	KNOWN	AC010641.1	1	2	0.846013
chr19	405438	409170	407304	ENSG00000183186.7	-	protein_coding	KNOWN	C2CD4C	1	2	0.846013
chr19	416583	460996	438789	ENSG00000129946.10	-	protein_coding	KNOWN	SHC2	6	13	1.002286
chr19	453134	453245	453189	ENSG00000252539.1	+	rRNA	KNOWN	RNA5SP462	1	1	1.135787
chr19	463346	474983	469164	ENSG00000181781.9	-	protein_coding	KNOWN	ODF3L2	3	4	0.974149
chr19	489176	505342	497259	ENSG00000099866.14	+	protein_coding	KNOWN	MADCAM1	10	8	1.147301
chr19	490046	507833	498939	ENSG00000266933.2	-	antisense	KNOWN	AC005775.2	1	3	1.168163
chr19	507497	519654	513575	ENSG00000141933.9	+	protein_coding	KNOWN	TPGS1	2	2	1.438389
chr19	531712	542092	536902	ENSG00000099804.8	+	protein_coding	KNOWN	CDC34	7	5	1.314384
chr19	544034	549924	546979	ENSG00000197540.7	+	protein_coding	KNOWN	GZMM	2	5	1.314384
chr19	567210	572228	569719	ENSG00000267751.5	-	antisense	KNOWN	AC009005.2	4	3	1.302052
chr19	571277	583493	577385	ENSG00000172270.18	+	protein_coding	KNOWN	BSG	16	9	1.123701
chr19	589893	617159	603526	ENSG00000099822.2	+	protein_coding	KNOWN	HCN2	1	8	1.380111
chr19	590430	591300	590865	ENSG00000267036.2	-	processed_pseudogene	KNOWN	AC005559.3	1	1	1.346063
chr19	617224	633604	625414	ENSG00000099821.13	-	protein_coding	KNOWN	POLRMT	8	21	1.471373
chr19	637105	637537	637321	ENSG00000261204.1	-	lincRNA	KNOWN	AC004449.6	1	1	1.444294
chr19	639879	644371	642125	ENSG00000070388.11	+	protein_coding	KNOWN	FGF22	3	3	1.444294
chr19	647526	663277	655401	ENSG00000070423.17	-	protein_coding	KNOWN	RNF126	7	9	1.418689
chr19	663482	669500	666491	ENSG00000267666.2	+	lincRNA	KNOWN	AC004156.3	1	2	1.413920
chr19	676365	683399	679882	ENSG00000070404.9	+	protein_coding	KNOWN	FSTL3	7	5	1.290676
chr19	685546	695498	690522	ENSG00000185198.11	-	protein_coding	KNOWN	PRSS57	2	5	1.347304
chr19	690353	691172	690762	ENSG00000213726.5	+	processed_pseudogene	KNOWN	RPS2P52	1	1	1.393161
chr19	708939	748329	728634	ENSG00000099864.17	+	protein_coding	KNOWN	PALM	11	9	1.448470
chr19	751126	764318	757722	ENSG00000099812.8	+	protein_coding	KNOWN	MISP	2	5	1.513743
chr19	781002	781862	781432	ENSG00000272473.1	-	lincRNA	KNOWN	AC006273.4	1	1	1.398022
chr19	782755	785080	783917	ENSG00000267530.2	+	lincRNA	KNOWN	AC006273.5	2	2	1.398022
chr19	797075	812327	804701	ENSG00000011304.17	+	protein_coding	KNOWN	PTBP1	21	15	1.527316
chr19	804940	805001	804970	ENSG00000265767.1	+	miRNA	KNOWN	MIR4745	1	1	1.552380
chr19	812488	821977	817232	ENSG00000129951.18	-	protein_coding	KNOWN	PLPPR3	4	8	1.388174
chr19	813584	813653	813618	ENSG00000263414.1	+	miRNA	KNOWN	MIR3187	1	1	1.388174
chr19	825097	832018	828557	ENSG00000172232.9	+	protein_coding	KNOWN	AZU1	2	5	1.369521
chr19	840960	848175	844567	ENSG00000196415.9	+	protein_coding	KNOWN	PRTN3	2	5	1.324232
chr19	851014	856247	853630	ENSG00000197561.6	+	protein_coding	KNOWN	ELANE	2	6	1.473082
chr19	859643	863630	861636	ENSG00000197766.7	+	protein_coding	KNOWN	CFD	2	5	1.473082
chr19	867630	893218	880424	ENSG00000175221.14	-	protein_coding	KNOWN	MED16	15	16	1.590594
chr19	893484	893590	893537	ENSG00000207507.1	+	snRNA	KNOWN	RNU6-9	1	1	1.711636
chr19	896503	913245	904874	ENSG00000198858.9	-	protein_coding	KNOWN	R3HDM4	8	8	1.716662
chr19	917287	921015	919151	ENSG00000116014.9	+	protein_coding	KNOWN	KISS1R	3	5	1.737561
chr19	925781	975934	950857	ENSG00000116017.10	+	protein_coding	KNOWN	ARID3A	7	9	1.453476
chr19	928259	928817	928538	ENSG00000267159.2	-	antisense	KNOWN	AC005391.2	1	2	1.737561
chr19	956485	958149	957317	ENSG00000275162.1	+	sense_intronic	KNOWN	LLNLR-260G6.1	1	2	1.449777
chr19	984271	998438	991354	ENSG00000065268.10	+	protein_coding	KNOWN	WDR18	11	10	1.348686
chr19	999796	1002757	1001276	ENSG00000266990.1	-	antisense	KNOWN	LLNLR-284B4.2	1	3	1.315664
chr19	1000419	1009732	1005075	ENSG00000116032.5	+	protein_coding	KNOWN	GRIN3B	2	9	1.315664
chr19	1009648	1021179	1015413	ENSG00000182087.12	-	protein_coding	KNOWN	TMEM259	12	11	1.865104
chr19	1010221	1010907	1010564	ENSG00000274177.1	+	antisense	KNOWN	LLNLR-284B4.1	1	2	1.882354
chr19	1021522	1021628	1021575	ENSG00000207357.1	+	snRNA	KNOWN	RNU6-2	1	1	1.882354
chr19	1026581	1039068	1032824	ENSG00000064666.14	+	protein_coding	KNOWN	CNN2	12	7	1.760537
chr19	1038727	1039064	1038895	ENSG00000279753.1	-	TEC	KNOWN	AC011558.5	1	1	1.714625
chr19	1040101	1065572	1052836	ENSG00000064687.12	+	protein_coding	KNOWN	ABCA7	19	47	1.779747
chr19	1065923	1086628	1076275	ENSG00000180448.10	+	protein_coding	KNOWN	HMHA1	16	23	1.472824
chr19	1086579	1095380	1090979	ENSG00000099817.11	-	protein_coding	KNOWN	POLR2E	14	9	1.534551
chr19	1103926	1106791	1105358	ENSG00000167468.16	+	protein_coding	KNOWN	GPX4	13	8	1.628045
chr19	1107636	1174283	1140959	ENSG00000064932.15	-	protein_coding	KNOWN	SBNO2	10	32	1.641447
chr19	1177558	1228435	1202996	ENSG00000118046.14	+	protein_coding	KNOWN	STK11	9	13	1.507551
chr19	1203209	1203842	1203525	ENSG00000267736.2	+	transcribed_processed_pseudogene	KNOWN	HMGB2P1	1	1	1.482685
chr19	1228287	1238027	1233157	ENSG00000099625.12	-	protein_coding	KNOWN	CBARP	5	10	1.715267
chr19	1238179	1239522	1238850	ENSG00000267778.1	+	lincRNA	KNOWN	AC004221.2	1	3	1.745581
chr19	1241746	1244826	1243286	ENSG00000099624.7	+	protein_coding	KNOWN	ATP5D	9	5	1.745581
chr19	1248553	1259140	1253846	ENSG00000167470.12	+	protein_coding	KNOWN	MIDN	6	8	1.790736
chr19	1259384	1274880	1267132	ENSG00000099622.13	+	protein_coding	KNOWN	CIRBP	46	9	1.794847
chr19	1267814	1270241	1269027	ENSG00000267493.3	-	antisense	KNOWN	CIRBP-AS1	1	2	1.796919
chr19	1275438	1279249	1277343	ENSG00000228300.13	+	protein_coding	KNOWN	C19orf24	5	3	1.788253
chr19	1285893	1378431	1332162	ENSG00000160953.14	+	protein_coding	KNOWN	MUM1	17	14	1.419643
chr19	1286154	1300237	1293195	ENSG00000099617.3	+	protein_coding	KNOWN	EFNA2	1	4	1.608619
chr19	1307401	1307719	1307560	ENSG00000240846.2	-	processed_pseudogene	KNOWN	RPS15P9	1	1	1.541155
chr19	1321225	1322846	1322035	ENSG00000267372.2	+	lincRNA	KNOWN	AC005330.2	1	2	1.224442
chr19	1372238	1374364	1373301	ENSG00000279488.1	-	TEC	KNOWN	AC004623.3	1	1	1.355026
chr19	1376773	1377520	1377146	ENSG00000267755.1	-	antisense	KNOWN	AC004623.2	2	2	1.355026
chr19	1383527	1395589	1389558	ENSG00000115286.19	+	protein_coding	KNOWN	NDUFS7	20	10	1.465493
chr19	1386804	1389651	1388227	ENSG00000280486.1	-	antisense	KNOWN	LLNLR-307A6.1	1	3	1.355026
chr19	1392170	1396467	1394318	ENSG00000248015.6	-	antisense	KNOWN	AC005329.7	3	3	1.593390
chr19	1397084	1401570	1399327	ENSG00000130005.11	-	protein_coding	KNOWN	GAMT	3	6	1.593390
chr19	1407569	1435687	1421628	ENSG00000071626.16	+	protein_coding	KNOWN	DAZAP1	11	13	1.428253
chr19	1438358	1440494	1439426	ENSG00000115268.9	+	protein_coding	KNOWN	RPS15	13	5	1.511895
chr19	1440839	1441938	1441388	ENSG00000268798.1	+	lincRNA	KNOWN	CTB-25B13.5	1	1	1.511895
chr19	1446302	1473244	1459773	ENSG00000115266.11	+	protein_coding	KNOWN	APC2	8	15	1.513492
chr19	1457670	1458580	1458125	ENSG00000267317.2	-	antisense	KNOWN	CTB-25B13.12	1	1	1.464410
chr19	1461143	1479556	1470349	ENSG00000119559.15	-	protein_coding	KNOWN	C19orf25	13	4	1.647841
chr19	1481428	1490752	1486090	ENSG00000115257.15	-	protein_coding	KNOWN	PCSK4	13	15	1.766355
chr19	1490747	1497927	1494337	ENSG00000115255.10	+	protein_coding	KNOWN	REEP6	4	5	1.180586
chr19	1505018	1513604	1509311	ENSG00000185761.10	-	protein_coding	KNOWN	ADAMTSL5	11	12	1.267746
chr19	1508375	1508963	1508669	ENSG00000267092.2	+	antisense	KNOWN	CTB-25B13.9	1	2	1.180586
chr19	1524074	1535456	1529765	ENSG00000185988.11	+	protein_coding	KNOWN	PLK5	4	14	1.424389
chr19	1553981	1554032	1554006	ENSG00000266399.1	-	miRNA	NOVEL	AC027307.2	1	1	1.228597
chr19	1554669	1568058	1561363	ENSG00000181588.16	-	protein_coding	KNOWN	MEX3D	2	3	1.228597
chr19	1556605	1556686	1556645	ENSG00000222720.1	+	miRNA	NOVEL	AC027307.1	1	1	1.228597
chr19	1570575	1570860	1570717	ENSG00000239367.2	-	misc_RNA	KNOWN	RN7SL477P	1	1	1.458314
chr19	1573596	1592801	1583198	ENSG00000071655.17	-	protein_coding	KNOWN	MBD3	11	7	1.448706
chr19	1576939	1577086	1577012	ENSG00000279009.1	+	TEC	KNOWN	AC005943.6	1	1	1.458314
chr19	1578339	1605445	1591892	ENSG00000267059.2	-	protein_coding	KNOWN	AC005943.2	1	7	1.420788
chr19	1597172	1605490	1601331	ENSG00000127540.11	-	protein_coding	KNOWN	UQCR11	5	4	1.392460
chr19	1609290	1652605	1630947	ENSG00000071564.14	-	protein_coding	KNOWN	TCF3	20	20	1.373869
chr19	1616492	1616595	1616543	ENSG00000252933.1	-	snRNA	KNOWN	RNU6-1223P	1	1	1.427061
chr19	1724115	1724395	1724255	ENSG00000275642.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.952189
chr19	1748056	1748745	1748400	ENSG00000267073.1	+	lincRNA	KNOWN	AC005256.1	2	2	1.273486
chr19	1752373	1780988	1766680	ENSG00000205922.4	+	protein_coding	KNOWN	ONECUT3	1	2	1.248369
chr19	1782075	1812276	1797175	ENSG00000130270.16	-	protein_coding	KNOWN	ATP8B3	8	29	1.186479
chr19	1815246	1848463	1831854	ENSG00000079313.11	-	protein_coding	KNOWN	REXO1	7	16	1.201236
chr19	1815249	1815873	1815561	ENSG00000267007.1	+	antisense	KNOWN	CTB-31O20.3	1	2	1.047044
chr19	1816159	1816238	1816198	ENSG00000223244.1	-	miRNA	KNOWN	MIR1909	1	1	1.047044
chr19	1822089	1824542	1823315	ENSG00000267244.5	+	processed_transcript	KNOWN	CTB-31O20.4	4	3	1.047044
chr19	1852382	1853622	1853002	ENSG00000267125.2	+	antisense	KNOWN	CTB-31O20.6	1	2	1.290158
chr19	1852399	1863568	1857983	ENSG00000129911.8	-	protein_coding	KNOWN	KLF16	4	3	1.290158
chr19	1860250	1862019	1861134	ENSG00000267141.1	+	antisense	KNOWN	CTB-31O20.8	1	3	1.290158
chr19	1874871	1876169	1875520	ENSG00000261526.2	-	lincRNA	KNOWN	CTB-31O20.2	1	1	1.524165
chr19	1875016	1875992	1875504	ENSG00000267232.1	+	lincRNA	KNOWN	CTB-31O20.9	1	2	1.524165
chr19	1876810	1885547	1881178	ENSG00000129968.15	-	protein_coding	KNOWN	ABHD17A	6	6	1.524165
chr19	1905214	1926013	1915613	ENSG00000227500.9	+	protein_coding	KNOWN	SCAMP4	13	7	1.403410
chr19	1905378	1913447	1909412	ENSG00000213638.5	+	protein_coding	KNOWN	ADAT3	2	2	1.323614
chr19	1941149	1981338	1961243	ENSG00000133275.15	+	protein_coding	KNOWN	CSNK1G2	11	12	1.401508
chr19	1952531	1954586	1953558	ENSG00000180846.8	-	antisense	KNOWN	CSNK1G2-AS1	2	4	1.648862
chr19	1985438	2034881	2010159	ENSG00000133243.8	-	protein_coding	KNOWN	BTBD2	11	9	1.365019
chr19	1989401	1990370	1989885	ENSG00000267283.1	+	processed_transcript	KNOWN	AC005306.3	2	2	1.298339
chr19	2002580	2003581	2003080	ENSG00000279653.1	-	TEC	KNOWN	LLNLR-304A6.1	1	1	1.336530
chr19	2013728	2014656	2014192	ENSG00000275468.1	-	processed_pseudogene	KNOWN	LLNLR-304A6.2	1	1	1.418421
chr19	2030853	2031051	2030952	ENSG00000267180.1	-	transcribed_processed_pseudogene	KNOWN	AC007136.1	1	1	1.347386
chr19	2037465	2051244	2044354	ENSG00000099875.14	-	protein_coding	KNOWN	MKNK2	13	14	1.361610
chr19	2071038	2096673	2083855	ENSG00000172081.13	-	protein_coding	KNOWN	MOB3A	9	5	1.274776
chr19	2096429	2099593	2098011	ENSG00000099840.13	+	protein_coding	KNOWN	IZUMO4	13	10	1.387448
chr19	2100988	2164465	2132726	ENSG00000065000.15	-	protein_coding	KNOWN	AP3D1	12	32	1.453017
chr19	2164149	2232578	2198363	ENSG00000104885.17	+	protein_coding	KNOWN	DOT1L	9	28	1.497316
chr19	2212029	2215565	2213797	ENSG00000267122.1	-	antisense	KNOWN	AC004490.1	1	2	1.515047
chr19	2230084	2237704	2233894	ENSG00000104886.9	-	protein_coding	KNOWN	PLEKHJ1	13	7	1.529397
chr19	2234062	2234149	2234105	ENSG00000221411.1	-	miRNA	KNOWN	MIR1227	1	1	1.529397
chr19	2235829	2235926	2235877	ENSG00000276587.1	-	miRNA	KNOWN	MIR6789	1	1	1.529397
chr19	2236504	2248679	2242591	ENSG00000104897.9	+	protein_coding	KNOWN	SF3A2	7	9	1.529397
chr19	2249309	2252073	2250691	ENSG00000104899.5	+	protein_coding	KNOWN	AMH	3	5	1.543261
chr19	2250639	2250718	2250678	ENSG00000267021.1	+	miRNA	KNOWN	MIR4321	1	1	1.547874
chr19	2252252	2269759	2261005	ENSG00000167476.10	-	protein_coding	KNOWN	JSRP1	3	7	1.547874
chr19	2269509	2273490	2271499	ENSG00000104904.12	+	protein_coding	KNOWN	OAZ1	11	6	1.445650
chr19	2269525	2341172	2305348	ENSG00000273734.1	+	protein_coding	KNOWN	LLfos-48D6.2	1	8	1.368513
chr19	2274622	2282176	2278399	ENSG00000188305.5	-	protein_coding	KNOWN	C19orf35	1	4	1.431302
chr19	2289784	2292024	2290904	ENSG00000220008.3	-	protein_coding	KNOWN	LINGO3	1	1	1.290952
chr19	2321517	2328620	2325068	ENSG00000130332.14	-	protein_coding	KNOWN	LSM7	7	4	1.336958
chr19	2328615	2354806	2341710	ENSG00000005206.16	+	protein_coding	KNOWN	SPPL2B	14	15	1.450400
chr19	2389771	2426239	2408005	ENSG00000178297.12	+	protein_coding	KNOWN	TMPRSS9	5	17	1.054606
chr19	2425624	2427894	2426759	ENSG00000099800.7	-	protein_coding	KNOWN	TIMM13	2	3	1.031024
chr19	2427638	2456996	2442317	ENSG00000176619.10	-	protein_coding	KNOWN	LMNB2	6	12	1.369892
chr19	2434914	2435000	2434957	ENSG00000274304.1	-	miRNA	KNOWN	MIR7108	1	1	1.427783
chr19	2458935	2462185	2460560	ENSG00000267201.1	-	lincRNA	KNOWN	AC005624.2	1	2	1.318763
chr19	2476122	2478259	2477190	ENSG00000099860.8	+	protein_coding	KNOWN	GADD45B	7	4	1.494363
chr19	2503047	2503141	2503094	ENSG00000252962.1	-	snRNA	KNOWN	RNU6-993P	1	1	1.132256
chr19	2511219	2702709	2606964	ENSG00000176533.12	-	protein_coding	KNOWN	GNG7	2	6	1.067027
chr19	2538112	2538754	2538433	ENSG00000105694.3	+	processed_pseudogene	KNOWN	TCEB1P28	1	2	1.087269
chr19	2595019	2595291	2595155	ENSG00000263974.2	-	misc_RNA	KNOWN	RN7SL121P	1	1	0.825477
chr19	2610155	2611862	2611008	ENSG00000267412.1	-	sense_intronic	KNOWN	CTC-265F19.2	1	1	1.122094
chr19	2630715	2630793	2630754	ENSG00000277904.1	+	miRNA	KNOWN	MIR7850	1	1	1.310490
chr19	2631954	2632849	2632401	ENSG00000267214.1	+	antisense	KNOWN	CTC-265F19.3	1	2	1.310490
chr19	2641838	2643853	2642845	ENSG00000267749.1	-	sense_intronic	KNOWN	CTC-265F19.1	1	1	1.310490
chr19	2700689	2701266	2700977	ENSG00000276097.1	-	sense_intronic	KNOWN	AC006538.8	1	1	1.220978
chr19	2714567	2721418	2717992	ENSG00000176490.4	-	protein_coding	KNOWN	DIRAS1	3	3	1.232965
chr19	2717769	2740048	2728908	ENSG00000267001.1	-	protein_coding	KNOWN	AC006538.4	1	3	1.187884
chr19	2727743	2729327	2728535	ENSG00000261342.1	-	sense_intronic	KNOWN	AC006538.1	1	1	1.232965
chr19	2732204	2740152	2736178	ENSG00000141873.10	-	protein_coding	KNOWN	SLC39A3	6	4	1.133019
chr19	2754714	2783371	2769042	ENSG00000104969.9	-	protein_coding	KNOWN	SGTA	5	12	1.226970
chr19	2785460	2815807	2800633	ENSG00000172009.14	+	protein_coding	KNOWN	THOP1	14	13	1.040787
chr19	2819874	2835773	2827823	ENSG00000172006.11	+	protein_coding	KNOWN	ZNF554	4	6	1.179476
chr19	2841435	2860484	2850959	ENSG00000186300.11	+	protein_coding	KNOWN	ZNF555	3	4	0.700471
chr19	2847227	2858716	2852971	ENSG00000267063.1	-	antisense	KNOWN	AC006130.3	1	2	0.614177
chr19	2867335	2883445	2875390	ENSG00000172000.7	+	protein_coding	KNOWN	ZNF556	3	4	0.752274
chr19	2872345	2872430	2872387	ENSG00000263997.1	-	miRNA	NOVEL	AC006130.1	1	1	0.799438
chr19	2874950	2875592	2875271	ENSG00000267398.1	-	processed_pseudogene	KNOWN	AC006130.4	1	2	0.799438
chr19	2896625	2897222	2896923	ENSG00000266938.1	-	processed_pseudogene	KNOWN	AC119403.1	1	1	0.608954
chr19	2900898	2918476	2909687	ENSG00000171970.12	+	protein_coding	KNOWN	ZNF57	5	7	0.675235
chr19	2915146	2926807	2920976	ENSG00000253392.2	-	antisense	KNOWN	AC006277.2	1	3	0.746395
chr19	2933218	2944971	2939094	ENSG00000175691.8	-	protein_coding	KNOWN	ZNF77	2	4	0.774252
chr19	2949035	2950644	2949839	ENSG00000279452.1	+	TEC	KNOWN	AC006277.3	1	1	0.930860
chr19	2977446	2995184	2986315	ENSG00000104953.18	+	protein_coding	KNOWN	TLE6	11	17	0.969018
chr19	2997638	3047635	3022636	ENSG00000065717.14	-	protein_coding	KNOWN	TLE2	22	20	1.089276
chr19	3052910	3063107	3058008	ENSG00000104964.14	-	protein_coding	KNOWN	AES	12	7	1.151289
chr19	3052910	3053724	3053317	ENSG00000267469.1	+	antisense	KNOWN	AC005944.2	1	2	1.151289
chr19	3094410	3124004	3109207	ENSG00000088256.8	+	protein_coding	KNOWN	GNA11	7	7	1.242560
chr19	3118665	3119304	3118984	ENSG00000267139.1	-	antisense	KNOWN	AC005262.3	1	2	1.267563
chr19	3121116	3122128	3121622	ENSG00000267688.1	-	antisense	KNOWN	AC005262.2	1	3	1.267563
chr19	3130717	3131398	3131057	ENSG00000266944.1	+	processed_pseudogene	KNOWN	AC005262.4	1	2	1.096924
chr19	3136193	3163769	3149981	ENSG00000060558.3	+	protein_coding	KNOWN	GNA15	3	7	1.044594
chr19	3141576	3155175	3148375	ENSG00000267551.3	-	antisense	KNOWN	AC005264.2	1	4	1.057037
chr19	3172346	3180332	3176339	ENSG00000125910.5	+	protein_coding	KNOWN	S1PR4	2	2	1.281026
chr19	3185563	3209575	3197569	ENSG00000125912.10	+	protein_coding	KNOWN	NCLN	8	15	1.287884
chr19	3224703	3297076	3260889	ENSG00000161082.12	+	protein_coding	KNOWN	CELF5	8	13	0.962096
chr19	3296765	3303003	3299884	ENSG00000267448.5	-	antisense	KNOWN	AC010649.1	3	2	0.913535
chr19	3355554	3355955	3355754	ENSG00000280103.1	-	TEC	KNOWN	AC007792.1	1	1	0.808199
chr19	3359563	3469217	3414390	ENSG00000141905.17	+	protein_coding	KNOWN	NFIC	10	11	1.226511
chr19	3371395	3371602	3371498	ENSG00000279599.1	+	TEC	KNOWN	AC005514.2	1	1	1.257692
chr19	3473986	3480542	3477264	ENSG00000095932.6	-	protein_coding	KNOWN	SMIM24	4	4	1.487920
chr19	3490821	3500940	3495880	ENSG00000129932.7	-	protein_coding	KNOWN	DOHH	5	5	1.110026
chr19	3506273	3538330	3522301	ENSG00000105325.13	+	protein_coding	KNOWN	FZR1	8	14	1.265910
chr19	3521248	3521320	3521284	ENSG00000252408.1	-	snoRNA	NOVEL	SNORD38	1	1	1.237042
chr19	3538261	3574290	3556275	ENSG00000161091.12	-	protein_coding	KNOWN	MFSD12	15	11	1.446615
chr19	3539154	3544030	3541592	ENSG00000183397.5	+	protein_coding	KNOWN	C19orf71	1	4	1.404931
chr19	3544199	3557569	3550884	ENSG00000267436.1	+	antisense	KNOWN	AC005786.7	1	2	1.423711
chr19	3558015	3558486	3558250	ENSG00000267231.1	+	lincRNA	KNOWN	AC005786.5	1	2	1.438100
chr19	3567278	3567959	3567618	ENSG00000279590.1	-	TEC	KNOWN	AC005786.6	1	1	1.438100
chr19	3568120	3568273	3568196	ENSG00000266959.1	-	processed_pseudogene	KNOWN	AC005786.3	1	1	1.438100
chr19	3572777	3579088	3575932	ENSG00000064961.18	+	protein_coding	KNOWN	HMG20B	16	10	1.600333
chr19	3585553	3593541	3589547	ENSG00000179855.5	+	protein_coding	KNOWN	GIPC3	1	6	1.378746
chr19	3594506	3606840	3600673	ENSG00000006638.11	-	protein_coding	KNOWN	TBXA2R	4	4	1.100605
chr19	3607247	3613930	3610588	ENSG00000226800.5	+	antisense	KNOWN	CACTIN-AS1	1	4	1.321203
chr19	3610641	3626815	3618728	ENSG00000105298.13	-	protein_coding	KNOWN	CACTIN	10	12	1.475639
chr19	3630183	3700479	3665331	ENSG00000186111.8	-	protein_coding	KNOWN	PIP5K1C	6	18	1.475382
chr19	3672582	3674295	3673438	ENSG00000267304.1	+	antisense	KNOWN	AC004637.1	1	3	1.587949
chr19	3708109	3750813	3729461	ENSG00000105289.14	+	protein_coding	KNOWN	TJP3	9	21	1.149789
chr19	3750819	3761699	3756259	ENSG00000011132.11	-	protein_coding	KNOWN	APBA3	8	11	1.234767
chr19	3753840	3756517	3755178	ENSG00000267205.1	+	antisense	KNOWN	AC005954.4	1	3	1.234767
chr19	3754620	3756659	3755639	ENSG00000267138.1	-	sense_intronic	KNOWN	AC005954.3	1	2	1.234767
chr19	3762664	3768575	3765619	ENSG00000183617.4	+	protein_coding	KNOWN	MRPL54	2	3	1.234767
chr19	3769089	3772221	3770655	ENSG00000173976.15	-	protein_coding	KNOWN	RAX2	2	3	1.282781
chr19	3775996	3776182	3776089	ENSG00000267148.1	-	unprocessed_pseudogene	KNOWN	AC005777.3	1	1	1.302445
chr19	3777970	3802129	3790049	ENSG00000007264.13	-	protein_coding	KNOWN	MATK	16	17	1.228543
chr19	3804024	3869032	3836528	ENSG00000105278.10	-	protein_coding	KNOWN	ZFR2	9	19	1.265378
chr19	3870991	3872107	3871549	ENSG00000266989.1	+	processed_pseudogene	KNOWN	FTLP5	1	3	0.901769
chr19	3879864	3928079	3903971	ENSG00000167654.17	+	protein_coding	KNOWN	ATCAY	6	14	1.268471
chr19	3920245	3920506	3920375	ENSG00000266627.2	-	misc_RNA	KNOWN	RN7SL202P	1	1	1.573861
chr19	3933103	3942416	3937759	ENSG00000077009.13	+	protein_coding	KNOWN	NMRK2	5	8	1.204692
chr19	3958453	3971123	3964788	ENSG00000167657.11	-	protein_coding	KNOWN	DAPK3	7	9	1.417237
chr19	3961414	3961512	3961463	ENSG00000207733.1	-	miRNA	KNOWN	MIR637	1	1	1.398022
chr19	3976056	3985469	3980762	ENSG00000167658.15	-	protein_coding	KNOWN	EEF2	7	15	1.614617
chr19	3982507	3982572	3982539	ENSG00000206775.1	-	snoRNA	KNOWN	SNORD37	1	1	1.614617
chr19	4007646	4039386	4023516	ENSG00000105229.6	+	protein_coding	KNOWN	PIAS4	6	11	1.472707
chr19	4044364	4066945	4055654	ENSG00000178951.8	-	protein_coding	KNOWN	ZBTB7A	2	3	1.393393
chr19	4061615	4062749	4062182	ENSG00000268670.1	-	sense_intronic	KNOWN	CTD-2622I13.3	1	2	1.378296
chr19	4090321	4124129	4107225	ENSG00000126934.13	-	protein_coding	KNOWN	MAP2K2	11	12	1.438421
chr19	4127492	4127732	4127612	ENSG00000278007.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.404072
chr19	4153601	4173054	4163327	ENSG00000060566.13	+	protein_coding	KNOWN	CREB3L3	5	10	0.962001
chr19	4174109	4182604	4178356	ENSG00000077463.14	-	protein_coding	KNOWN	SIRT6	15	8	1.131762
chr19	4183354	4224814	4204084	ENSG00000089847.12	+	protein_coding	KNOWN	ANKRD24	6	22	1.238418
chr19	4229498	4237531	4233514	ENSG00000105246.5	+	protein_coding	KNOWN	EBI3	2	5	0.975307
chr19	4246339	4247358	4246848	ENSG00000280247.1	-	TEC	KNOWN	AC005578.3	1	1	0.958725
chr19	4247079	4269090	4258084	ENSG00000105248.15	+	protein_coding	KNOWN	CCDC94	2	8	1.006873
chr19	4278601	4290724	4284662	ENSG00000105251.10	+	protein_coding	KNOWN	SHD	5	6	1.009255
chr19	4292232	4302431	4297331	ENSG00000167664.8	-	protein_coding	KNOWN	TMIGD2	4	5	1.043082
chr19	4304600	4323843	4314221	ENSG00000105255.10	+	protein_coding	KNOWN	FSD1	10	13	1.190673
chr19	4324043	4342786	4333414	ENSG00000178078.11	-	protein_coding	KNOWN	STAP2	10	15	1.022780
chr19	4339577	4343491	4341534	ENSG00000269425.1	+	antisense	KNOWN	AC007292.7	1	2	0.917767
chr19	4343527	4360086	4351806	ENSG00000008382.15	+	protein_coding	KNOWN	MPND	8	13	1.093793
chr19	4347244	4354057	4350650	ENSG00000269807.1	-	antisense	KNOWN	AC007292.4	1	2	1.089883
chr19	4347780	4349061	4348420	ENSG00000267938.1	-	unprocessed_pseudogene	KNOWN	EIF1P6	1	4	0.917767
chr19	4356637	4358448	4357542	ENSG00000269318.1	-	antisense	KNOWN	AC007292.3	1	1	1.206734
chr19	4360370	4400547	4380458	ENSG00000141985.9	-	protein_coding	KNOWN	SH3GL1	6	10	1.336303
chr19	4363789	4364640	4364214	ENSG00000267980.1	+	antisense	KNOWN	AC007292.6	1	2	1.206734
chr19	4385004	4385113	4385058	ENSG00000276751.1	+	miRNA	NOVEL	AC011498.1	1	1	1.428456
chr19	4402662	4445018	4423840	ENSG00000167670.15	+	protein_coding	KNOWN	CHAF1A	7	15	0.983741
chr19	4429689	4430934	4430311	ENSG00000267255.1	-	antisense	KNOWN	CTB-50L17.5	1	2	0.998489
chr19	4444999	4457822	4451410	ENSG00000167671.11	-	protein_coding	KNOWN	UBXN6	10	11	1.257175
chr19	4445978	4446048	4446013	ENSG00000266437.1	+	miRNA	KNOWN	MIR4746	1	1	1.057844
chr19	4447304	4448217	4447760	ENSG00000267030.1	+	antisense	KNOWN	CTB-50L17.7	1	2	1.057844
chr19	4448810	4450836	4449823	ENSG00000280239.1	+	TEC	KNOWN	CTB-50L17.8	1	1	1.192827
chr19	4454014	4455286	4454650	ENSG00000267769.1	+	antisense	KNOWN	CTB-50L17.9	1	2	1.384576
chr19	4457962	4471493	4464727	ENSG00000267011.5	-	lincRNA	KNOWN	CTB-50L17.16	3	2	1.349441
chr19	4472287	4502211	4487249	ENSG00000167674.14	+	protein_coding	KNOWN	CTB-50L17.10	10	16	1.084277
chr19	4502180	4518465	4510322	ENSG00000167676.4	-	protein_coding	KNOWN	PLIN4	2	8	1.370471
chr19	4522531	4535224	4528877	ENSG00000214456.8	-	protein_coding	KNOWN	PLIN5	6	8	1.335843
chr19	4528427	4540067	4534247	ENSG00000267385.1	-	protein_coding	KNOWN	CTB-50L17.14	1	4	1.033056
chr19	4536409	4540474	4538441	ENSG00000171236.9	-	protein_coding	KNOWN	LRG1	2	3	0.942848
chr19	4542593	4559808	4551200	ENSG00000167680.15	-	protein_coding	KNOWN	SEMA6B	3	17	1.077003
chr19	4621194	4622307	4621750	ENSG00000267408.1	+	unprocessed_pseudogene	KNOWN	CTB-50L17.2	1	3	1.037544
chr19	4639518	4655568	4647543	ENSG00000185361.8	+	protein_coding	KNOWN	TNFAIP8L1	3	2	1.131388
chr19	4641374	4670370	4655872	ENSG00000074842.7	-	protein_coding	KNOWN	MYDGF	4	6	1.116527
chr19	4652171	4652283	4652227	ENSG00000280849.1	-	miRNA	NOVEL	AC005339.1	1	1	1.105127
chr19	4654964	4655524	4655244	ENSG00000268565.1	-	antisense	KNOWN	AC005339.2	1	2	1.105127
chr19	4675224	4724673	4699948	ENSG00000142002.16	-	protein_coding	KNOWN	DPP9	25	23	1.196248
chr19	4679282	4685948	4682615	ENSG00000205790.1	+	antisense	KNOWN	DPP9-AS1	1	3	1.061186
chr19	4726291	4726379	4726335	ENSG00000266209.1	-	miRNA	NOVEL	AC005783.1	1	1	1.639480
chr19	4769140	4772533	4770836	ENSG00000176840.11	+	lincRNA	KNOWN	MIR7-3HG	10	6	0.966498
chr19	4770670	4770779	4770724	ENSG00000207630.1	+	miRNA	KNOWN	MIR7-3	1	1	0.962432
chr19	4785120	4791207	4788163	ENSG00000268536.1	-	lincRNA	KNOWN	AC005523.3	1	2	0.957562
chr19	4791681	4801273	4796477	ENSG00000141965.4	+	protein_coding	KNOWN	FEM1A	1	1	0.937892
chr19	4791745	4795559	4793652	ENSG00000269604.1	-	antisense	KNOWN	AC005523.2	2	2	0.937892
chr19	4815932	4831704	4823818	ENSG00000127666.9	-	protein_coding	KNOWN	TICAM1	2	7	1.118311
chr19	4838332	4838907	4838619	ENSG00000267484.1	+	antisense	KNOWN	CTC-518P12.6	1	2	0.892319
chr19	4838341	4867768	4853054	ENSG00000105355.8	-	protein_coding	KNOWN	PLIN3	7	8	0.923392
chr19	4876712	4876798	4876755	ENSG00000264899.1	+	miRNA	NOVEL	AC027319.2	1	1	1.010564
chr19	4889203	4889298	4889250	ENSG00000221535.1	-	miRNA	NOVEL	AC027319.1	1	1	1.010564
chr19	4890437	4902867	4896652	ENSG00000205784.2	-	protein_coding	KNOWN	ARRDC5	1	3	0.693002
chr19	4903080	4962154	4932617	ENSG00000276043.4	+	protein_coding	KNOWN	UHRF1	7	17	0.804448
chr19	4920332	4920442	4920387	ENSG00000273632.1	+	miRNA	NOVEL	AC027319.3	1	1	0.699946
chr19	4932687	4932740	4932713	ENSG00000263409.1	+	miRNA	KNOWN	MIR4747	1	1	0.869599
chr19	4969113	5153595	5061354	ENSG00000127663.14	+	protein_coding	KNOWN	KDM4B	12	24	1.084425
chr19	5158495	5340803	5249649	ENSG00000105426.14	-	protein_coding	KNOWN	PTPRS	12	38	1.037599
chr19	5178119	5178464	5178291	ENSG00000267550.1	+	antisense	KNOWN	CTC-482H14.5	1	1	0.858035
chr19	5277734	5278133	5277933	ENSG00000239524.2	+	processed_pseudogene	KNOWN	RPL32P34	1	1	1.135787
chr19	5294247	5294696	5294471	ENSG00000274447.1	+	antisense	KNOWN	LLNLR-304G9.1	1	1	1.091992
chr19	5455431	5456856	5456143	ENSG00000105428.5	+	protein_coding	KNOWN	ZNRF4	1	1	0.939989
chr19	5558167	5568034	5563100	ENSG00000223573.6	-	lincRNA	KNOWN	TINCR	3	3	0.665727
chr19	5576660	5576938	5576799	ENSG00000233270.1	-	processed_pseudogene	KNOWN	SNRPEP4	1	1	0.962278
chr19	5586999	5624046	5605522	ENSG00000130254.11	-	protein_coding	KNOWN	SAFB2	11	21	0.941160
chr19	5623035	5668478	5645756	ENSG00000160633.12	+	protein_coding	KNOWN	SAFB	14	21	1.095778
chr19	5674947	5691876	5683411	ENSG00000130255.12	+	protein_coding	KNOWN	RPL36	8	6	1.194079
chr19	5678421	5680896	5679658	ENSG00000174917.8	-	protein_coding	KNOWN	C19orf70	6	4	1.164343
chr19	5680604	5688523	5684563	ENSG00000167733.13	+	protein_coding	KNOWN	HSD11B1L	23	10	1.164343
chr19	5691834	5720572	5706203	ENSG00000196365.11	-	protein_coding	KNOWN	LONP1	15	19	1.355914
chr19	5720677	5778734	5749705	ENSG00000174898.15	+	protein_coding	KNOWN	CATSPERD	3	22	1.006154
chr19	5782960	5784765	5783862	ENSG00000212123.3	-	protein_coding	KNOWN	PRR22	2	3	1.122154
chr19	5784005	5785619	5784812	ENSG00000267157.1	-	protein_coding	KNOWN	CTB-54O9.9	1	3	1.122154
chr19	5784832	5791238	5788035	ENSG00000141994.15	-	protein_coding	KNOWN	DUS3L	15	13	1.150903
chr19	5822925	5823024	5822974	ENSG00000263995.1	+	miRNA	NOVEL	AC011499.1	1	1	1.050306
chr19	5823802	5828324	5826063	ENSG00000171119.2	+	protein_coding	KNOWN	NRTN	1	2	1.050306
chr19	5830610	5839731	5835170	ENSG00000156413.13	-	protein_coding	KNOWN	FUT6	12	4	1.315767
chr19	5842888	5851474	5847181	ENSG00000171124.12	-	protein_coding	KNOWN	FUT3	10	4	1.234112
chr19	5847467	5858239	5852853	ENSG00000267709.1	+	antisense	KNOWN	AC024592.9	1	4	0.952177
chr19	5865826	5870540	5868183	ENSG00000130383.7	-	protein_coding	KNOWN	FUT5	2	2	0.885101
chr19	5866171	5903787	5884979	ENSG00000267740.5	-	protein_coding	KNOWN	AC024592.12	3	5	1.137858
chr19	5891276	5904006	5897641	ENSG00000174886.12	-	protein_coding	KNOWN	NDUFA11	6	5	1.087504
chr19	5899895	5901511	5900703	ENSG00000266941.1	+	antisense	KNOWN	AC104532.3	2	2	1.087504
chr19	5904841	5914707	5909774	ENSG00000267314.1	+	protein_coding	KNOWN	AC104532.2	1	4	1.217210
chr19	5904858	5910853	5907855	ENSG00000187650.3	+	protein_coding	KNOWN	VMAC	1	2	1.126224
chr19	5911578	5913899	5912738	ENSG00000267571.1	-	antisense	KNOWN	AC104532.4	1	2	1.359314
chr19	5911707	5916208	5913957	ENSG00000105519.13	+	protein_coding	KNOWN	CAPS	6	6	1.359314
chr19	5914407	5915322	5914864	ENSG00000283027.1	+	protein_coding	KNOWN	CAPS	1	4	1.359314
chr19	5916139	5978142	5947140	ENSG00000031823.14	-	protein_coding	KNOWN	RANBP3	30	17	1.063897
chr19	5978403	6020363	5999383	ENSG00000266983.1	+	antisense	KNOWN	CTC-232P5.1	1	4	0.990798
chr19	5993164	6199572	6096368	ENSG00000087903.12	-	protein_coding	KNOWN	RFX2	24	18	0.876024
chr19	6067953	6077119	6072536	ENSG00000267262.1	+	antisense	KNOWN	CTC-232P5.3	1	2	0.834498
chr19	6072823	6073527	6073175	ENSG00000267589.1	+	processed_pseudogene	KNOWN	CTC-232P5.4	1	2	0.906125
chr19	6109322	6125797	6117559	ENSG00000267299.1	+	antisense	KNOWN	CTB-66B24.1	1	2	0.793983
chr19	6135247	6193094	6164170	ENSG00000130377.13	+	protein_coding	KNOWN	ACSBG2	13	15	0.880794
chr19	6176256	6176442	6176349	ENSG00000267415.1	-	transcribed_processed_pseudogene	KNOWN	CTC-503J8.2	1	1	0.717926
chr19	6210379	6279948	6245163	ENSG00000130382.8	-	protein_coding	KNOWN	MLLT1	3	12	1.142557
chr19	6259157	6259799	6259478	ENSG00000267563.1	+	antisense	KNOWN	CTC-503J8.4	1	2	0.903044
chr19	6263068	6263469	6263268	ENSG00000280394.1	-	TEC	KNOWN	CTC-503J8.8	1	1	0.903044
chr19	6306142	6333629	6319885	ENSG00000167769.4	-	protein_coding	KNOWN	ACER1	1	6	0.790536
chr19	6343761	6362149	6352955	ENSG00000269802.1	-	antisense	KNOWN	CTB-180A7.3	1	4	0.802374
chr19	6361452	6368908	6365180	ENSG00000125656.8	+	protein_coding	KNOWN	CLPP	6	6	0.816812
chr19	6372433	6375251	6373842	ENSG00000125652.7	+	protein_coding	KNOWN	ALKBH7	3	4	1.033282
chr19	6375148	6379058	6377103	ENSG00000125650.4	-	protein_coding	KNOWN	PSPN	2	2	1.033282
chr19	6379569	6393981	6386775	ENSG00000125651.13	-	protein_coding	KNOWN	GTF2F1	6	13	1.112950
chr19	6386762	6390400	6388581	ENSG00000269444.1	-	sense_overlapping	KNOWN	CTB-180A7.6	1	2	1.065065
chr19	6389638	6389703	6389670	ENSG00000274390.1	-	miRNA	KNOWN	MIR6885	1	1	1.033282
chr19	6392921	6392983	6392952	ENSG00000273758.1	-	miRNA	KNOWN	MIR6790	1	1	1.321623
chr19	6393809	6412404	6403106	ENSG00000214347.6	+	lincRNA	KNOWN	CTB-180A7.8	2	3	1.258132
chr19	6413348	6424794	6419071	ENSG00000088247.15	-	protein_coding	KNOWN	KHSRP	13	21	0.830726
chr19	6416410	6416511	6416460	ENSG00000266722.1	-	miRNA	KNOWN	MIR3940	1	1	0.830726
chr19	6426037	6433779	6429908	ENSG00000181240.13	-	protein_coding	KNOWN	SLC25A41	3	8	0.778250
chr19	6436079	6465203	6450641	ENSG00000125648.14	-	protein_coding	KNOWN	SLC25A23	13	13	0.973801
chr19	6463777	6467221	6465499	ENSG00000130545.15	+	protein_coding	KNOWN	CRB3	4	5	1.203194
chr19	6467207	6482557	6474882	ENSG00000205744.9	-	protein_coding	KNOWN	DENND1C	14	23	1.285252
chr19	6469465	6470152	6469808	ENSG00000275234.1	+	antisense	KNOWN	CTD-2396E7.11	1	1	1.225532
chr19	6494319	6502848	6498583	ENSG00000104833.10	-	protein_coding	KNOWN	TUBB4A	14	5	0.581030
chr19	6494320	6494805	6494562	ENSG00000268203.1	+	antisense	KNOWN	CTD-2396E7.9	1	2	0.581030
chr19	6494320	6495025	6494672	ENSG00000268191.1	+	antisense	KNOWN	CTD-2396E7.10	1	2	0.581030
chr19	6530999	6535928	6533463	ENSG00000125657.4	+	protein_coding	KNOWN	TNFSF9	1	3	0.807783
chr19	6552358	6554494	6553426	ENSG00000268742.1	-	processed_pseudogene	KNOWN	CTD-2396E7.7	1	3	0.463248
chr19	6562123	6563848	6562985	ENSG00000269546.1	-	processed_pseudogene	KNOWN	CLIC4P2	1	3	0.463248
chr19	6572956	6573057	6573006	ENSG00000199223.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.292689
chr19	6583183	6604103	6593643	ENSG00000125726.10	-	protein_coding	KNOWN	CD70	3	4	0.667942
chr19	6593329	6594055	6593692	ENSG00000268785.1	+	processed_pseudogene	KNOWN	RPL7P50	1	1	0.849290
chr19	6661253	6670588	6665920	ENSG00000125735.10	-	protein_coding	KNOWN	TNFSF14	2	5	0.420310
chr19	6677704	6730562	6704133	ENSG00000125730.16	-	protein_coding	KNOWN	C3	18	41	0.854686
chr19	6716386	6717742	6717064	ENSG00000276980.1	-	sense_intronic	KNOWN	CTD-3128G10.7	1	1	1.208968
chr19	6729914	6737603	6733758	ENSG00000125734.13	-	protein_coding	KNOWN	GPR108	17	18	1.193609
chr19	6736712	6736778	6736745	ENSG00000277714.1	-	miRNA	KNOWN	MIR6791	1	1	1.193437
chr19	6737925	6751526	6744725	ENSG00000125733.17	+	protein_coding	KNOWN	TRIP10	13	15	1.183020
chr19	6748293	6751467	6749880	ENSG00000269680.1	-	antisense	KNOWN	CTD-3128G10.6	1	2	1.150526
chr19	6752160	6767588	6759874	ENSG00000125731.12	-	protein_coding	KNOWN	SH2D3A	8	10	1.100657
chr19	6772714	6857366	6815040	ENSG00000141968.7	+	protein_coding	KNOWN	VAV1	10	27	0.643024
chr19	6887566	6940459	6914012	ENSG00000174837.14	+	protein_coding	KNOWN	ADGRE1	8	21	0.172218
chr19	6894994	6896832	6895913	ENSG00000280091.1	-	TEC	KNOWN	CTC-312O10.3	1	1	0.227344
chr19	6898299	6898686	6898492	ENSG00000269385.1	+	unprocessed_pseudogene	KNOWN	CTC-312O10.2	1	2	0.227344
chr19	6928345	6928629	6928487	ENSG00000276568.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.126757
chr19	6952500	6990846	6971673	ENSG00000268758.5	-	transcribed_unprocessed_pseudogene	KNOWN	ADGRE4P	2	16	0.185534
chr19	6953211	6954904	6954057	ENSG00000268845.1	+	antisense	KNOWN	RP11-1137G4.3	1	2	0.509498
chr19	7005012	7006074	7005543	ENSG00000269761.1	-	processed_pseudogene	KNOWN	RP11-1137G4.4	1	1	0.199974
chr19	7018971	7021432	7020201	ENSG00000196589.5	-	lincRNA	KNOWN	CTB-25J19.1	2	3	0.659032
chr19	7030577	7033011	7031794	ENSG00000237247.5	+	protein_coding	KNOWN	MBD3L5	2	3	0.436951
chr19	7037748	7040179	7038963	ENSG00000205718.8	-	protein_coding	KNOWN	MBD3L4	2	3	0.436951
chr19	7049321	7051735	7050528	ENSG00000230522.4	+	protein_coding	KNOWN	MBD3L2	2	3	0.178656
chr19	7056209	7058640	7057424	ENSG00000182315.8	-	protein_coding	KNOWN	MBD3L3	2	3	0.077778
chr19	7069444	7087968	7078706	ENSG00000130544.11	+	protein_coding	KNOWN	ZNF557	2	8	0.614771
chr19	7112255	7294034	7203144	ENSG00000171105.13	-	protein_coding	KNOWN	INSR	7	22	0.692926
chr19	7160420	7160495	7160457	ENSG00000266483.1	-	miRNA	NOVEL	AC010311.1	1	1	0.562883
chr19	7348943	7383385	7366164	ENSG00000263264.1	+	protein_coding	KNOWN	CTB-133G6.1	1	10	0.821067
chr19	7382834	7472477	7427655	ENSG00000268861.6	+	protein_coding	KNOWN	CTD-2207O23.3	1	22	0.811075
chr19	7390522	7395039	7392780	ENSG00000267852.1	-	antisense	KNOWN	CTB-133G6.2	1	3	0.742543
chr19	7395113	7472477	7433795	ENSG00000104880.17	+	protein_coding	KNOWN	ARHGEF18	5	21	0.807323
chr19	7476875	7497449	7487162	ENSG00000104883.7	-	protein_coding	KNOWN	PEX11G	4	7	1.020777
chr19	7492976	7508450	7500713	ENSG00000198723.10	+	protein_coding	KNOWN	C19orf45	7	9	0.936922
chr19	7507052	7519622	7513337	ENSG00000267952.1	+	protein_coding	KNOWN	CTD-2207O23.12	2	3	1.061894
chr19	7515292	7521026	7518159	ENSG00000198816.5	+	protein_coding	KNOWN	ZNF358	3	2	1.100166
chr19	7519916	7520460	7520188	ENSG00000269371.1	-	antisense	KNOWN	CTD-2207O23.11	1	2	1.100166
chr19	7522626	7534009	7528317	ENSG00000090674.15	+	protein_coding	KNOWN	MCOLN1	10	14	1.125269
chr19	7533595	7540059	7536827	ENSG00000268614.1	+	protein_coding	KNOWN	CTD-2207O23.10	1	10	1.171426
chr19	7534004	7561764	7547884	ENSG00000032444.15	+	protein_coding	KNOWN	PNPLA6	24	35	1.230791
chr19	7595902	7618304	7607103	ENSG00000076826.9	+	protein_coding	KNOWN	CAMSAP3	4	19	0.958439
chr19	7617439	7617505	7617472	ENSG00000273657.1	+	miRNA	KNOWN	MIR6792	1	1	1.096858
chr19	7619525	7629565	7624545	ENSG00000076924.11	-	protein_coding	KNOWN	XAB2	4	19	1.096858
chr19	7629737	7631956	7630846	ENSG00000229833.9	+	protein_coding	KNOWN	PET100	7	5	1.161753
chr19	7629796	7643048	7636422	ENSG00000268400.5	+	protein_coding	KNOWN	CTD-3214H19.4	3	10	1.169314
chr19	7631611	7633748	7632679	ENSG00000174788.9	-	protein_coding	KNOWN	PCP2	2	4	1.170441
chr19	7633766	7636990	7635378	ENSG00000268204.1	-	antisense	KNOWN	CTD-3214H19.6	1	2	1.170441
chr19	7636881	7647873	7642377	ENSG00000076944.14	+	protein_coding	KNOWN	STXBP2	23	20	1.170441
chr19	7665717	7666476	7666096	ENSG00000269228.1	+	processed_pseudogene	KNOWN	CTD-3214H19.12	1	2	0.922067
chr19	7669044	7670454	7669749	ENSG00000104918.7	+	protein_coding	KNOWN	RETN	3	4	0.957087
chr19	7676628	7679826	7678227	ENSG00000183019.7	+	protein_coding	KNOWN	MCEMP1	3	7	1.030591
chr19	7678501	7682854	7680677	ENSG00000269711.1	+	protein_coding	KNOWN	CTD-3214H19.16	1	3	1.030591
chr19	7680843	7687703	7684273	ENSG00000181029.8	+	protein_coding	KNOWN	TRAPPC5	4	2	1.030591
chr19	7688758	7702146	7695452	ENSG00000104921.14	-	protein_coding	KNOWN	FCER2	7	11	0.891284
chr19	7728957	7733906	7731431	ENSG00000182566.12	-	protein_coding	KNOWN	CLEC4G	4	10	0.742599
chr19	7739994	7747564	7743779	ENSG00000090659.17	-	protein_coding	KNOWN	CD209	11	7	0.721520
chr19	7750684	7751161	7750922	ENSG00000242636.1	+	processed_pseudogene	KNOWN	RPL21P129	1	1	0.688636
chr19	7763149	7769605	7766377	ENSG00000104938.16	+	protein_coding	KNOWN	CLEC4M	14	9	0.688636
chr19	7787549	7790621	7789085	ENSG00000268297.1	+	unprocessed_pseudogene	KNOWN	CLEC4GP1	1	9	0.647602
chr19	7813615	7814425	7814020	ENSG00000269763.1	-	processed_pseudogene	KNOWN	EXOSC3P2	1	2	0.798261
chr19	7830233	7864976	7847604	ENSG00000142459.8	+	protein_coding	KNOWN	EVI5L	7	19	1.004620
chr19	7868719	7874379	7871549	ENSG00000183248.11	-	protein_coding	KNOWN	PRR36	2	6	1.298194
chr19	7870561	7871296	7870928	ENSG00000268120.1	+	lincRNA	KNOWN	CTD-3193O13.11	1	2	1.339919
chr19	7879445	7880120	7879782	ENSG00000269153.1	-	processed_pseudogene	KNOWN	LYPLA2P2	1	1	1.339919
chr19	7886977	7887096	7887036	ENSG00000199900.1	-	rRNA	KNOWN	RNA5SP463	1	1	1.339919
chr19	7888505	7902021	7895263	ENSG00000171017.10	+	protein_coding	KNOWN	LRRC8E	6	4	1.420032
chr19	7898804	7903542	7901173	ENSG00000214248.2	-	antisense	KNOWN	CTD-3193O13.12	1	1	1.429988
chr19	7903843	7914478	7909160	ENSG00000076984.17	+	protein_coding	KNOWN	MAP2K7	8	12	1.594102
chr19	7912648	7913518	7913083	ENSG00000268149.1	-	antisense	KNOWN	CTD-3193O13.13	1	2	1.819663
chr19	7916145	7919097	7917621	ENSG00000260001.6	+	protein_coding	KNOWN	TGFBR3L	3	6	1.819663
chr19	7918652	7919157	7918904	ENSG00000260500.1	-	antisense	KNOWN	CTD-3193O13.1	1	1	1.819663
chr19	7920316	7923250	7921783	ENSG00000104976.11	+	protein_coding	KNOWN	SNAPC2	6	5	1.819663
chr19	7924485	7926166	7925325	ENSG00000178531.5	-	protein_coding	KNOWN	CTXN1	1	2	1.819663
chr19	7926001	7926810	7926405	ENSG00000269139.2	+	processed_transcript	KNOWN	CTD-3193O13.8	2	2	1.819663
chr19	7926718	7943920	7935319	ENSG00000104980.7	-	protein_coding	KNOWN	TIMM44	12	13	1.468057
chr19	7958579	8445041	8201810	ENSG00000066044.13	-	protein_coding	KNOWN	ELAVL1	6	8	0.888541
chr19	7959123	7960012	7959567	ENSG00000269813.1	+	antisense	KNOWN	CTD-3193O13.14	1	2	1.260779
chr19	8008729	8016025	8012377	ENSG00000267939.1	+	lincRNA	KNOWN	CTD-2325M2.1	1	2	0.827778
chr19	8052767	8062650	8057708	ENSG00000131142.13	+	protein_coding	KNOWN	CCL25	4	6	1.023279
chr19	8065402	8149846	8107624	ENSG00000142449.12	-	protein_coding	KNOWN	FBN3	8	64	0.747751
chr19	8173272	8175567	8174419	ENSG00000269651.1	+	unprocessed_pseudogene	KNOWN	CTD-3020H12.3	1	4	0.636575
chr19	8206736	8262421	8234578	ENSG00000090661.11	+	protein_coding	KNOWN	CERS4	16	13	0.835764
chr19	8222153	8239648	8230900	ENSG00000271717.1	-	antisense	KNOWN	CTD-3020H12.4	1	2	0.814169
chr19	8302127	8308356	8305241	ENSG00000167775.10	-	protein_coding	KNOWN	CD320	6	5	1.073613
chr19	8308283	8321379	8314831	ENSG00000167774.2	-	protein_coding	KNOWN	CTD-2550O8.5	1	5	1.196258
chr19	8308768	8321396	8315082	ENSG00000267855.5	-	protein_coding	KNOWN	NDUFA7	6	6	1.200993
chr19	8321158	8323340	8322249	ENSG00000233927.4	+	protein_coding	KNOWN	RPS28	4	4	1.214752
chr19	8322584	8343262	8332923	ENSG00000186994.11	-	protein_coding	KNOWN	KANK3	5	11	1.166157
chr19	8346010	8346096	8346053	ENSG00000265364.1	-	miRNA	NOVEL	AC010323.1	1	1	1.138989
chr19	8346517	8347687	8347102	ENSG00000268884.1	+	processed_pseudogene	KNOWN	CTD-2550O8.7	1	3	1.138989
chr19	8363289	8374373	8368831	ENSG00000167772.11	+	protein_coding	KNOWN	ANGPTL4	11	8	0.971146
chr19	8374373	8390685	8382529	ENSG00000269386.5	-	antisense	KNOWN	RAB11B-AS1	3	3	1.107199
chr19	8389290	8389380	8389335	ENSG00000265390.1	-	miRNA	KNOWN	MIR4999	1	1	1.120189
chr19	8389981	8404434	8397207	ENSG00000185236.11	+	protein_coding	KNOWN	RAB11B	5	5	0.811699
chr19	8413270	8439017	8426143	ENSG00000099785.10	+	protein_coding	KNOWN	MARCH2	8	5	0.896464
chr19	8423355	8427827	8425591	ENSG00000268931.1	-	antisense	KNOWN	RP11-886P16.6	1	2	0.839605
chr19	8444570	8445597	8445083	ENSG00000279827.1	-	TEC	KNOWN	RP11-886P16.10	1	1	1.001942
chr19	8444767	8489114	8466940	ENSG00000099783.11	+	protein_coding	KNOWN	HNRNPM	17	17	0.799829
chr19	8490056	8503112	8496584	ENSG00000133246.11	-	protein_coding	KNOWN	PRAM1	4	10	1.096204
chr19	8509678	8514164	8511921	ENSG00000133250.13	-	protein_coding	KNOWN	ZNF414	9	8	1.261302
chr19	8520790	8577577	8549183	ENSG00000142347.16	-	protein_coding	KNOWN	MYO1F	22	29	1.010576
chr19	8549506	8550139	8549822	ENSG00000268618.1	+	antisense	KNOWN	AC092316.1	1	2	1.049138
chr19	8575079	8576170	8575624	ENSG00000279396.1	-	TEC	KNOWN	AC130469.1	1	1	0.932869
chr19	8580242	8610735	8595488	ENSG00000142303.13	-	protein_coding	KNOWN	ADAMTS10	14	26	1.161134
chr19	8581160	8582715	8581937	ENSG00000267986.1	+	antisense	KNOWN	AC130469.2	1	2	0.932869
chr19	8630671	8638649	8634660	ENSG00000268480.1	+	lincRNA	KNOWN	CTD-2586B10.1	1	4	0.797636
chr19	8676844	8677068	8676956	ENSG00000261866.1	+	processed_pseudogene	KNOWN	AC092566.1	1	1	0.334969
chr19	8695721	8696321	8696021	ENSG00000279426.1	-	TEC	KNOWN	AC093230.2	1	1	0.487920
chr19	8697397	8698822	8698109	ENSG00000181786.4	-	protein_coding	KNOWN	ACTL9	2	1	0.487920
chr19	8728735	8729204	8728969	ENSG00000269244.1	-	processed_pseudogene	KNOWN	RPL23AP78	1	1	0.242017
chr19	8730954	8732009	8731481	ENSG00000181733.2	+	protein_coding	KNOWN	OR2Z1	1	1	0.186035
chr19	8778665	8778861	8778763	ENSG00000268922.1	-	processed_pseudogene	KNOWN	CTD-2557P19.4	1	1	0.314384
chr19	8806170	8832328	8819249	ENSG00000167785.8	-	protein_coding	KNOWN	ZNF558	7	10	0.124212
chr19	8821501	8824110	8822805	ENSG00000269300.1	+	antisense	KNOWN	CTD-2529P6.3	1	2	0.056013
chr19	8832398	8843340	8837869	ENSG00000170948.3	+	protein_coding	KNOWN	MBD3L1	2	3	0.499416
chr19	8833065	8833541	8833303	ENSG00000269400.1	+	sense_intronic	KNOWN	CTD-2529P6.4	1	1	0.499416
chr19	8848844	8981342	8915093	ENSG00000181143.15	-	protein_coding	KNOWN	MUC16	5	84	0.313449
chr19	9019344	9019984	9019664	ENSG00000267332.1	+	processed_pseudogene	KNOWN	BOLA3P2	1	2	0.531166
chr19	9083112	9083398	9083255	ENSG00000267154.1	-	unprocessed_pseudogene	KNOWN	OR1M4P	1	1	0.267079
chr19	9093179	9094213	9093696	ENSG00000170929.5	+	protein_coding	KNOWN	OR1M1	1	1	0.473241
chr19	9102269	9103306	9102787	ENSG00000170923.2	-	protein_coding	KNOWN	OR7G2	1	1	0.473241
chr19	9114828	9115763	9115295	ENSG00000161807.3	-	protein_coding	KNOWN	OR7G1	1	1	0.384774
chr19	9122160	9122492	9122326	ENSG00000275787.1	-	unprocessed_pseudogene	KNOWN	OR7G15P	1	1	0.384774
chr19	9126012	9126950	9126481	ENSG00000170920.2	-	protein_coding	KNOWN	OR7G3	1	1	0.384774
chr19	9140380	9163424	9151902	ENSG00000130803.14	+	protein_coding	KNOWN	ZNF317	6	7	0.386710
chr19	9182369	9183048	9182708	ENSG00000267418.1	-	processed_pseudogene	KNOWN	TCEB1P29	1	2	0.399501
chr19	9185594	9188817	9187205	ENSG00000188000.3	+	protein_coding	KNOWN	OR7D2	1	1	0.399501
chr19	9191286	9192170	9191728	ENSG00000267775.1	+	unprocessed_pseudogene	KNOWN	OR7E16P	1	1	-0.038207
chr19	9204308	9205217	9204762	ENSG00000187847.3	+	unprocessed_pseudogene	KNOWN	OR7E25P	1	1	-0.038207
chr19	9213850	9214871	9214360	ENSG00000174667.3	-	protein_coding	KNOWN	OR7D4	1	1	0.219482
chr19	9235144	9236076	9235610	ENSG00000188314.3	+	unprocessed_pseudogene	KNOWN	OR7D1P	1	1	-0.074018
chr19	9250930	9252479	9251704	ENSG00000237521.2	+	protein_coding	KNOWN	OR7E24	1	1	-0.103139
chr19	9261015	9261716	9261365	ENSG00000180926.6	-	unprocessed_pseudogene	KNOWN	OR7E18P	1	1	-0.103139
chr19	9265440	9266283	9265861	ENSG00000225980.3	-	transcribed_unprocessed_pseudogene	KNOWN	OR7E19P	2	1	-0.103139
chr19	9278448	9279369	9278908	ENSG00000226480.1	-	unprocessed_pseudogene	KNOWN	OR7H1P	1	1	0.138285
chr19	9291515	9294482	9292998	ENSG00000267510.1	+	antisense	KNOWN	CTC-325H20.4	1	2	0.044686
chr19	9294275	9309838	9302056	ENSG00000196110.7	-	protein_coding	KNOWN	ZNF699	3	6	0.044686
chr19	9323772	9351162	9337467	ENSG00000188321.13	+	protein_coding	KNOWN	ZNF559	14	7	0.440348
chr19	9324174	9382617	9353395	ENSG00000270011.6	+	protein_coding	KNOWN	ZNF559-ZNF177	18	12	0.322594
chr19	9348106	9348703	9348404	ENSG00000270614.1	-	processed_pseudogene	KNOWN	CTC-325H20.7	1	1	0.367270
chr19	9363020	9382617	9372818	ENSG00000188629.11	+	protein_coding	KNOWN	ZNF177	4	9	0.187426
chr19	9383581	9407055	9395318	ENSG00000283108.1	-	processed_transcript	KNOWN	CTC-325H20.8	2	3	0.357122
chr19	9412598	9435578	9424088	ENSG00000174652.17	-	protein_coding	KNOWN	ZNF266	7	11	0.441262
chr19	9466507	9498607	9482557	ENSG00000198028.3	-	protein_coding	KNOWN	ZNF560	2	10	0.094228
chr19	9498678	9510079	9504378	ENSG00000267273.1	+	lincRNA	KNOWN	CTC-543D15.3	1	2	0.240604
chr19	9518150	9519341	9518745	ENSG00000260112.1	+	processed_pseudogene	KNOWN	CTC-543D15.1	1	1	0.253273
chr19	9523224	9538627	9530925	ENSG00000130818.10	-	protein_coding	KNOWN	ZNF426	4	8	0.421741
chr19	9538733	9539734	9539233	ENSG00000278611.1	+	lincRNA	KNOWN	CTC-543D15.8	2	2	0.554027
chr19	9560353	9584533	9572443	ENSG00000197961.11	-	protein_coding	KNOWN	ZNF121	3	6	0.141442
chr19	9604680	9621399	9613039	ENSG00000171469.10	-	protein_coding	KNOWN	ZNF561	21	7	0.749014
chr19	9615561	9616905	9616233	ENSG00000279471.1	-	protein_coding	KNOWN	AC008759.1	1	2	0.813589
chr19	9621291	9645896	9633593	ENSG00000267106.5	+	processed_transcript	KNOWN	ZNF561-AS1	9	5	0.596226
chr19	9641808	9675086	9658447	ENSG00000171466.9	-	protein_coding	KNOWN	ZNF562	8	6	0.599535
chr19	9683294	9684073	9683683	ENSG00000239830.1	-	processed_pseudogene	KNOWN	RPS4XP22	1	1	0.567330
chr19	9689924	9700817	9695370	ENSG00000224689.7	-	protein_coding	KNOWN	ZNF812	5	6	-0.014474
chr19	9721903	9722410	9722156	ENSG00000277587.1	+	lincRNA	KNOWN	CTD-3116E22.8	1	1	-0.081201
chr19	9724008	9725086	9724547	ENSG00000267490.1	-	unprocessed_pseudogene	KNOWN	CTD-3116E22.6	1	2	-0.081201
chr19	9730853	9731943	9731398	ENSG00000267612.1	+	lincRNA	KNOWN	CTD-3116E22.7	1	2	0.229495
chr19	9751993	9793180	9772586	ENSG00000196605.7	-	protein_coding	KNOWN	ZNF846	12	8	0.230200
chr19	9756152	9756863	9756507	ENSG00000267370.1	-	unprocessed_pseudogene	KNOWN	CTD-2623N2.3	1	1	0.288531
chr19	9774497	9774960	9774728	ENSG00000267741.1	+	processed_pseudogene	KNOWN	UBE2L4	1	1	0.135713
chr19	9776009	9776095	9776052	ENSG00000265379.1	+	miRNA	NOVEL	AC008752.1	1	1	0.135713
chr19	9793621	9802301	9797961	ENSG00000266950.1	+	lincRNA	KNOWN	CTD-2623N2.5	1	2	0.494090
chr19	9810267	9827816	9819041	ENSG00000127452.8	-	protein_coding	KNOWN	FBXL12	13	4	0.930073
chr19	9819954	9820094	9820024	ENSG00000200237.1	+	snoRNA	NOVEL	SNORA70	1	1	0.930073
chr19	9820141	9820455	9820298	ENSG00000267119.1	+	processed_pseudogene	KNOWN	RPL10P15	1	1	0.930073
chr19	9827892	9830115	9829003	ENSG00000198258.10	+	protein_coding	KNOWN	UBL5	8	5	0.935751
chr19	9834079	9835013	9834546	ENSG00000267289.1	-	lincRNA	KNOWN	CTD-2623N2.11	1	2	1.038880
chr19	9835257	9849682	9842469	ENSG00000127445.13	+	protein_coding	KNOWN	PIN1	11	6	1.038880
chr19	9853718	9936552	9895135	ENSG00000105088.8	-	protein_coding	KNOWN	OLFM2	5	6	1.045662
chr19	9959561	10010471	9985016	ENSG00000080573.6	-	protein_coding	KNOWN	COL5A3	2	67	0.873864
chr19	9995997	9997163	9996580	ENSG00000267650.1	+	antisense	KNOWN	CTD-2553C6.1	1	1	0.863367
chr19	10013249	10022279	10017764	ENSG00000080511.3	+	protein_coding	KNOWN	RDH8	3	6	1.021400
chr19	10037803	10074135	10055969	ENSG00000167798.16	+	transcribed_unprocessed_pseudogene	KNOWN	C3P1	2	37	0.800940
chr19	10038354	10038413	10038383	ENSG00000266204.1	+	miRNA	KNOWN	MIR5589	1	1	0.902450
chr19	10086122	10093252	10089687	ENSG00000130813.17	+	protein_coding	KNOWN	C19orf66	11	9	1.103128
chr19	10089032	10090377	10089704	ENSG00000267387.1	-	antisense	KNOWN	CTD-2240E14.4	1	1	1.030929
chr19	10092338	10102796	10097567	ENSG00000130812.10	-	protein_coding	KNOWN	ANGPTL6	4	6	1.327208
chr19	10106223	10114780	10110501	ENSG00000243207.6	+	protein_coding	KNOWN	PPAN-P2RY11	2	13	1.313076
chr19	10106289	10111634	10108961	ENSG00000130810.19	+	protein_coding	KNOWN	PPAN	8	12	1.319471
chr19	10107651	10107735	10107693	ENSG00000209645.1	+	snoRNA	KNOWN	SNORD105	1	1	1.327208
chr19	10109757	10109835	10109796	ENSG00000238531.1	+	snoRNA	KNOWN	SNORD105B	1	1	1.327208
chr19	10111538	10115372	10113455	ENSG00000244165.1	+	protein_coding	KNOWN	P2RY11	2	2	1.301915
chr19	10115017	10119918	10117467	ENSG00000130811.11	-	protein_coding	KNOWN	EIF3G	15	11	1.301915
chr19	10123043	10123134	10123088	ENSG00000257110.2	+	miRNA	NOVEL	AC020931.1	1	1	1.301915
chr19	10133345	10231286	10182315	ENSG00000130816.14	-	protein_coding	KNOWN	DNMT1	29	41	1.084487
chr19	10221435	10231272	10226353	ENSG00000267534.2	-	protein_coding	KNOWN	S1PR2	1	2	1.086953
chr19	10230413	10230485	10230449	ENSG00000264266.1	+	miRNA	KNOWN	MIR4322	1	1	1.143339
chr19	10251901	10260045	10255973	ENSG00000105364.13	+	protein_coding	KNOWN	MRPL4	11	10	1.114641
chr19	10252268	10285108	10268688	ENSG00000266978.1	-	antisense	KNOWN	CTD-2369P2.5	1	3	1.152340
chr19	10259109	10260045	10259577	ENSG00000267105.1	-	antisense	KNOWN	CTD-2369P2.4	1	2	1.114641
chr19	10270835	10286615	10278725	ENSG00000090339.8	+	protein_coding	KNOWN	ICAM1	5	7	1.196581
chr19	10285801	10289019	10287410	ENSG00000267607.1	-	antisense	KNOWN	CTD-2369P2.8	1	1	1.196581
chr19	10286967	10288522	10287744	ENSG00000105371.8	+	protein_coding	KNOWN	ICAM4	3	3	1.196581
chr19	10289981	10296778	10293379	ENSG00000105376.4	+	protein_coding	KNOWN	ICAM5	5	11	1.400778
chr19	10304803	10309880	10307341	ENSG00000220201.7	-	protein_coding	KNOWN	ZGLP1	3	6	1.401320
chr19	10305427	10316009	10310718	ENSG00000167807.15	-	protein_coding	KNOWN	CTD-2369P2.10	2	11	1.257157
chr19	10310045	10316015	10313030	ENSG00000267673.6	-	protein_coding	KNOWN	FDX1L	7	5	1.147487
chr19	10315471	10320678	10318074	ENSG00000267303.1	-	protein_coding	KNOWN	CTD-2369P2.12	1	8	1.147487
chr19	10316212	10333640	10324926	ENSG00000161847.13	-	protein_coding	KNOWN	RAVER1	8	13	1.193266
chr19	10333436	10336248	10334842	ENSG00000274425.1	+	antisense	KNOWN	AC114271.2	1	1	1.366614
chr19	10333776	10339823	10336799	ENSG00000076662.9	-	protein_coding	KNOWN	ICAM3	10	7	1.366614
chr19	10350529	10380676	10365602	ENSG00000105397.13	-	protein_coding	KNOWN	TYK2	21	25	1.138170
chr19	10391134	10420121	10405627	ENSG00000105401.6	-	protein_coding	KNOWN	CDC37	10	8	1.356024
chr19	10403458	10403538	10403498	ENSG00000221566.1	-	miRNA	KNOWN	MIR1181	1	1	1.391232
chr19	10416773	10469631	10443202	ENSG00000065989.15	+	protein_coding	KNOWN	PDE4A	9	17	1.184929
chr19	10486120	10503741	10494930	ENSG00000079999.13	-	protein_coding	KNOWN	KEAP1	10	6	1.066217
chr19	10490339	10491000	10490669	ENSG00000267197.1	-	sense_intronic	KNOWN	CTC-429L19.3	1	2	1.066901
chr19	10512742	10517931	10515336	ENSG00000180739.13	-	protein_coding	KNOWN	S1PR5	4	2	1.197883
chr19	10543895	10553418	10548656	ENSG00000130734.9	+	protein_coding	KNOWN	ATG4D	12	10	1.075545
chr19	10551033	10551092	10551062	ENSG00000238364.1	-	snRNA	KNOWN	RNU7-140P	1	1	1.311558
chr19	10552122	10552204	10552163	ENSG00000221410.1	+	miRNA	KNOWN	MIR1238	1	1	1.311558
chr19	10553078	10566037	10559557	ENSG00000129347.19	-	protein_coding	KNOWN	KRI1	15	19	1.311558
chr19	10566462	10569059	10567760	ENSG00000129355.6	-	protein_coding	KNOWN	CDKN2D	2	3	1.311558
chr19	10572671	10587315	10579993	ENSG00000129354.11	-	protein_coding	KNOWN	AP1M2	10	12	1.219104
chr19	10598001	10598965	10598483	ENSG00000271010.1	-	processed_pseudogene	KNOWN	CTC-539A10.7	1	1	0.954939
chr19	10602457	10644559	10623508	ENSG00000129353.14	+	protein_coding	KNOWN	SLC44A2	15	22	1.137405
chr19	10651862	10653844	10652853	ENSG00000267100.1	-	lincRNA	KNOWN	ILF3-AS1	1	1	1.443755
chr19	10654261	10692417	10673339	ENSG00000129351.17	+	protein_coding	KNOWN	ILF3	24	20	1.275263
chr19	10701430	10713437	10707433	ENSG00000213339.8	+	protein_coding	KNOWN	QTRT1	12	10	1.332899
chr19	10718079	10833488	10775783	ENSG00000079805.16	+	protein_coding	KNOWN	DNM2	22	21	1.136189
chr19	10718404	10718503	10718453	ENSG00000207972.1	+	miRNA	KNOWN	MIR638	1	1	1.324877
chr19	10780254	10780335	10780294	ENSG00000265879.1	+	miRNA	KNOWN	MIR4748	1	1	1.112340
chr19	10817426	10817496	10817461	ENSG00000207752.1	-	miRNA	KNOWN	MIR199A1	1	1	1.134034
chr19	10828973	10829035	10829004	ENSG00000275640.1	+	miRNA	KNOWN	MIR6793	1	1	1.134034
chr19	10832438	10836318	10834378	ENSG00000099203.6	-	protein_coding	KNOWN	TMED1	7	4	1.146099
chr19	10836575	10869790	10853182	ENSG00000214212.8	+	protein_coding	KNOWN	C19orf38	3	8	1.102398
chr19	10841839	10842250	10842044	ENSG00000267544.1	+	processed_pseudogene	KNOWN	AC007229.3	1	1	1.146099
chr19	10871513	10923070	10897291	ENSG00000142453.11	+	protein_coding	KNOWN	CARM1	10	16	1.206338
chr19	10922185	10928681	10925433	ENSG00000130733.10	-	protein_coding	KNOWN	YIPF2	12	10	0.905980
chr19	10928733	10933535	10931134	ENSG00000142444.6	+	protein_coding	KNOWN	C19orf52	3	2	1.030229
chr19	10961001	11065395	11013198	ENSG00000127616.17	+	protein_coding	KNOWN	SMARCA4	19	37	1.007378
chr19	11010917	11016011	11013464	ENSG00000266936.1	-	antisense	KNOWN	CTC-215O4.4	1	2	0.910879
chr19	11011708	11012006	11011857	ENSG00000276757.1	+	misc_RNA	KNOWN	RN7SL192P	1	1	0.910879
chr19	11033727	11033912	11033819	ENSG00000278643.1	+	misc_RNA	NOVEL	uc_338	1	1	0.958725
chr19	11089362	11133816	11111589	ENSG00000130164.11	+	protein_coding	KNOWN	LDLR	14	18	0.997487
chr19	11113474	11113534	11113504	ENSG00000273892.1	+	miRNA	KNOWN	MIR6886	1	1	1.032913
chr19	11131520	11155808	11143664	ENSG00000161888.11	-	protein_coding	KNOWN	SPC24	7	6	1.397408
chr19	11164267	11197791	11181029	ENSG00000197256.10	-	protein_coding	KNOWN	KANK2	13	13	1.240998
chr19	11199295	11262481	11230888	ENSG00000130158.13	-	protein_coding	KNOWN	DOCK6	16	48	1.231899
chr19	11203628	11216168	11209898	ENSG00000267082.1	+	antisense	KNOWN	CTC-510F12.2	1	3	1.281144
chr19	11208195	11208702	11208448	ENSG00000279807.1	+	TEC	KNOWN	CTC-510F12.3	1	1	1.157926
chr19	11221083	11221573	11221328	ENSG00000273733.1	+	antisense	KNOWN	CTC-510F12.7	1	1	1.408396
chr19	11237450	11241943	11239696	ENSG00000130173.13	+	protein_coding	KNOWN	C19orf80	4	6	1.234436
chr19	11296139	11326996	11311567	ENSG00000130167.13	+	protein_coding	KNOWN	TSPAN16	6	7	0.994455
chr19	11300777	11324441	11312609	ENSG00000267174.5	-	3prime_overlapping_ncrna	KNOWN	CTC-510F12.4	2	3	1.012868
chr19	11322046	11346270	11334158	ENSG00000105514.7	-	protein_coding	KNOWN	RAB3D	2	5	0.852427
chr19	11322156	11324195	11323175	ENSG00000267576.1	+	sense_intronic	KNOWN	CTC-510F12.6	1	2	1.133544
chr19	11342776	11346518	11344647	ENSG00000105518.13	-	protein_coding	KNOWN	TMEM205	16	4	0.715022
chr19	11344684	11354944	11349814	ENSG00000183401.11	+	protein_coding	KNOWN	CCDC159	20	13	0.973796
chr19	11355386	11365698	11360542	ENSG00000105520.10	+	protein_coding	KNOWN	PLPPR2	8	10	1.251933
chr19	11368123	11374935	11371529	ENSG00000267277.1	-	antisense	KNOWN	CTD-2342J14.6	1	3	1.117203
chr19	11374685	11376951	11375818	ENSG00000173928.2	+	protein_coding	KNOWN	SWSAP1	1	2	1.065997
chr19	11377205	11384342	11380773	ENSG00000187266.13	-	protein_coding	KNOWN	EPOR	8	9	1.065997
chr19	11384341	11419342	11401841	ENSG00000205517.12	-	protein_coding	KNOWN	RGL3	17	20	0.901906
chr19	11408772	11408880	11408826	ENSG00000202357.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.784258
chr19	11420604	11435782	11428193	ENSG00000198003.11	-	protein_coding	KNOWN	CCDC151	5	14	1.084243
chr19	11435288	11450968	11443128	ENSG00000130175.9	+	protein_coding	KNOWN	PRKCSH	20	19	1.119379
chr19	11451326	11481046	11466186	ENSG00000196361.9	-	protein_coding	KNOWN	ELAVL3	4	7	1.000616
chr19	11466240	11505698	11485969	ENSG00000267477.1	-	protein_coding	KNOWN	CTC-398G3.6	1	5	1.128416
chr19	11483427	11505923	11494675	ENSG00000161914.9	-	protein_coding	KNOWN	ZNF653	7	9	1.155324
chr19	11495544	11495622	11495583	ENSG00000274713.1	-	miRNA	KNOWN	MIR7974	1	1	1.160298
chr19	11505916	11529174	11517545	ENSG00000130159.13	-	protein_coding	KNOWN	ECSIT	14	8	1.083720
chr19	11516047	11516330	11516188	ENSG00000244080.3	-	misc_RNA	KNOWN	RN7SL833P	1	1	1.067414
chr19	11521968	11522498	11522233	ENSG00000213304.3	+	processed_pseudogene	KNOWN	CTC-398G3.1	1	1	1.067414
chr19	11523436	11523831	11523633	ENSG00000213303.3	+	processed_pseudogene	KNOWN	CTC-398G3.2	1	1	1.067414
chr19	11538717	11550323	11544520	ENSG00000130176.7	+	protein_coding	KNOWN	CNN1	10	8	0.940914
chr19	11551147	11559236	11555191	ENSG00000130165.10	-	protein_coding	KNOWN	ELOF1	9	5	1.147845
chr19	11559374	11619135	11589254	ENSG00000198551.9	+	protein_coding	KNOWN	ZNF627	6	5	0.781251
chr19	11574660	11579008	11576834	ENSG00000102575.10	-	protein_coding	KNOWN	ACP5	12	7	0.721077
chr19	11585246	11587135	11586190	ENSG00000249840.2	+	unprocessed_pseudogene	KNOWN	GAPDHP76	1	4	0.721077
chr19	11639776	11686569	11663172	ENSG00000197332.8	+	lincRNA	KNOWN	CTC-499B15.5	1	10	0.694844
chr19	11648364	11652877	11650620	ENSG00000267500.1	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF887P	1	3	0.711143
chr19	11666069	11667030	11666549	ENSG00000214223.4	-	processed_pseudogene	KNOWN	HNRNPA1P10	1	1	0.754410
chr19	11680944	11686259	11683601	ENSG00000267343.2	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF833P	2	3	0.659881
chr19	11721265	11739009	11730137	ENSG00000197933.12	-	protein_coding	KNOWN	ZNF823	4	4	0.464877
chr19	11725961	11730783	11728372	ENSG00000266922.1	-	sense_intronic	KNOWN	CTC-499B15.6	1	2	0.282562
chr19	11756533	11759933	11758233	ENSG00000220949.2	-	unprocessed_pseudogene	KNOWN	CTC-499B15.1	1	4	0.231849
chr19	11767000	11784078	11775539	ENSG00000197044.10	+	protein_coding	KNOWN	ZNF441	3	5	0.425574
chr19	11796084	11798598	11797341	ENSG00000267646.1	-	antisense	KNOWN	CTC-499B15.7	1	1	0.471925
chr19	11797667	11809622	11803644	ENSG00000177599.12	+	protein_coding	KNOWN	ZNF491	4	3	0.471925
chr19	11814284	11835201	11824742	ENSG00000171295.12	+	protein_coding	KNOWN	ZNF440	6	5	0.546099
chr19	11841241	11842439	11841840	ENSG00000267089.1	-	lincRNA	KNOWN	CTC-499B15.8	1	2	0.537792
chr19	11848726	11883750	11866238	ENSG00000171291.8	+	protein_coding	KNOWN	ZNF439	5	4	0.469129
chr19	11856032	11858302	11857167	ENSG00000278897.1	+	TEC	KNOWN	AC020951.1	1	1	0.476135
chr19	11887784	11914329	11901056	ENSG00000198429.9	+	protein_coding	KNOWN	ZNF69	3	5	0.295002
chr19	11925068	11950773	11937920	ENSG00000196757.7	+	protein_coding	KNOWN	ZNF700	3	4	0.672694
chr19	11925075	11979290	11952182	ENSG00000267179.1	+	protein_coding	KNOWN	CTD-2006C1.13	4	5	0.651838
chr19	11939959	11953381	11946670	ENSG00000267274.1	+	sense_overlapping	KNOWN	CTD-2006C1.12	1	2	0.677721
chr19	11965037	11980381	11972709	ENSG00000197054.11	+	protein_coding	KNOWN	ZNF763	5	4	0.694079
chr19	11987617	12046275	12016946	ENSG00000219665.8	+	processed_transcript	KNOWN	CTD-2006C1.2	9	4	0.443002
chr19	11996809	11996916	11996862	ENSG00000252060.1	+	rRNA	KNOWN	RNA5SP464	1	1	0.550656
chr19	12014732	12035741	12025236	ENSG00000197647.11	-	protein_coding	KNOWN	ZNF433	10	6	0.313797
chr19	12017888	12052967	12035427	ENSG00000257355.1	-	protein_coding	KNOWN	CTD-2006C1.10	1	5	0.443127
chr19	12027913	12028021	12027967	ENSG00000212497.1	-	rRNA	KNOWN	RNA5SP465	1	1	0.236382
chr19	12043805	12052939	12048372	ENSG00000257446.3	-	protein_coding	KNOWN	ZNF878	1	4	0.600617
chr19	12064699	12081565	12073132	ENSG00000223547.9	+	protein_coding	KNOWN	ZNF844	3	4	0.597347
chr19	12070164	12070271	12070217	ENSG00000252546.1	+	rRNA	KNOWN	RNA5SP466	1	1	0.517661
chr19	12088245	12088346	12088295	ENSG00000199444.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.517661
chr19	12092263	12137235	12114749	ENSG00000214189.8	+	protein_coding	KNOWN	ZNF788	7	4	0.451013
chr19	12092843	12140407	12116625	ENSG00000132010.15	-	protein_coding	KNOWN	ZNF20	8	5	0.470297
chr19	12096424	12096915	12096669	ENSG00000237273.1	+	processed_pseudogene	KNOWN	RSL24D1P8	1	1	0.498617
chr19	12106497	12106614	12106555	ENSG00000212576.1	+	rRNA	KNOWN	RNA5SP467	1	1	0.498617
chr19	12132117	12156731	12144424	ENSG00000213297.8	-	protein_coding	KNOWN	ZNF625-ZNF20	2	8	0.622534
chr19	12141806	12143322	12142564	ENSG00000242615.1	-	transcribed_processed_pseudogene	KNOWN	CTC-359D24.3	2	1	0.748888
chr19	12142090	12156729	12149409	ENSG00000257591.5	-	protein_coding	KNOWN	ZNF625	3	4	0.536499
chr19	12163064	12189881	12176472	ENSG00000196646.11	+	protein_coding	KNOWN	ZNF136	6	5	0.383921
chr19	12195015	12237767	12216391	ENSG00000234773.6	+	lincRNA	KNOWN	CTD-2666L21.1	4	3	0.342377
chr19	12224686	12294887	12259786	ENSG00000197857.13	-	protein_coding	KNOWN	ZNF44	8	12	0.489687
chr19	12260126	12260537	12260331	ENSG00000213293.4	+	processed_pseudogene	KNOWN	CTD-2666L21.3	1	1	0.326457
chr19	12284337	12285185	12284761	ENSG00000234750.1	+	processed_pseudogene	KNOWN	CTD-2666L21.2	1	1	0.502703
chr19	12317477	12333720	12325598	ENSG00000188868.13	-	protein_coding	KNOWN	ZNF563	4	5	0.441981
chr19	12345949	12365905	12355927	ENSG00000198342.9	-	protein_coding	KNOWN	ZNF442	5	6	0.198510
chr19	12373609	12373731	12373670	ENSG00000231361.1	+	processed_pseudogene	KNOWN	CTD-3105H18.5	1	1	0.569812
chr19	12379189	12401274	12390231	ENSG00000268744.1	-	protein_coding	KNOWN	CTD-3105H18.14	1	4	0.370279
chr19	12379746	12383687	12381716	ENSG00000248406.1	-	transcribed_unprocessed_pseudogene	KNOWN	CTD-3105H18.4	1	3	0.569812
chr19	12390016	12401271	12395643	ENSG00000196466.10	-	protein_coding	KNOWN	ZNF799	4	5	0.178975
chr19	12391949	12441082	12416515	ENSG00000268870.1	-	protein_coding	KNOWN	CTD-3105H18.16	1	4	0.373044
chr19	12429707	12441112	12435409	ENSG00000180855.15	-	protein_coding	KNOWN	ZNF443	2	4	0.235623
chr19	12433103	12484816	12458959	ENSG00000269755.1	-	protein_coding	KNOWN	CTD-3105H18.18	1	5	0.327790
chr19	12450935	12460705	12455820	ENSG00000234848.1	+	antisense	KNOWN	CTD-3105H18.7	1	3	0.382288
chr19	12461184	12513854	12487519	ENSG00000242852.6	-	protein_coding	KNOWN	ZNF709	3	4	0.422739
chr19	12461559	12551474	12506516	ENSG00000196826.7	-	protein_coding	KNOWN	CTD-2192J16.17	1	4	0.474504
chr19	12502675	12504106	12503390	ENSG00000236483.1	+	unprocessed_pseudogene	KNOWN	CTD-3105H18.8	1	3	0.415606
chr19	12504665	12504890	12504777	ENSG00000232579.1	+	unprocessed_pseudogene	KNOWN	MTCO1P27	1	1	0.415606
chr19	12504905	12505976	12505440	ENSG00000230321.1	+	unprocessed_pseudogene	KNOWN	CTD-3105H18.9	1	2	0.415606
chr19	12506249	12508030	12507139	ENSG00000234003.1	+	unprocessed_pseudogene	KNOWN	CTD-3105H18.11	1	4	0.415606
chr19	12508129	12508263	12508196	ENSG00000235686.1	+	processed_pseudogene	KNOWN	PPIAP20	1	1	0.415606
chr19	12525370	12551542	12538456	ENSG00000249709.7	-	protein_coding	KNOWN	ZNF564	5	5	0.426303
chr19	12525720	12580975	12553347	ENSG00000269693.1	-	protein_coding	KNOWN	CTD-2192J16.20	1	4	0.678386
chr19	12529768	12532973	12531370	ENSG00000269560.1	-	sense_intronic	KNOWN	CTD-2192J16.21	1	2	0.341060
chr19	12552597	12553644	12553120	ENSG00000230310.1	+	lincRNA	KNOWN	CTD-2192J16.11	1	2	0.832472
chr19	12559571	12561105	12560338	ENSG00000213290.4	+	processed_pseudogene	KNOWN	PGK1P2	1	2	0.832472
chr19	12577961	12640098	12609029	ENSG00000188033.9	-	protein_coding	KNOWN	ZNF490	4	6	0.924194
chr19	12610918	12633840	12622379	ENSG00000173875.13	+	protein_coding	KNOWN	ZNF791	6	5	0.917261
chr19	12643275	12643919	12643597	ENSG00000178464.6	-	processed_pseudogene	KNOWN	CTD-2192J16.15	1	1	1.026897
chr19	12643831	12648397	12646114	ENSG00000269242.1	-	protein_coding	KNOWN	CTD-2192J16.22	1	5	1.026897
chr19	12646511	12666742	12656626	ENSG00000104774.12	-	protein_coding	KNOWN	MAN2B1	17	24	1.033633
chr19	12664828	12669397	12667112	ENSG00000269590.1	-	protein_coding	KNOWN	CTD-2192J16.24	1	5	1.035036
chr19	12666800	12675832	12671316	ENSG00000123154.11	+	protein_coding	KNOWN	WDR83	11	11	1.133509
chr19	12668071	12671356	12669713	ENSG00000105583.9	-	protein_coding	KNOWN	WDR83OS	4	4	1.098023
chr19	12675717	12681902	12678809	ENSG00000095059.15	-	protein_coding	KNOWN	DHPS	23	11	1.187514
chr19	12682693	12687279	12684986	ENSG00000268945.1	-	lincRNA	KNOWN	CTD-2192J16.26	1	2	1.187514
chr19	12688053	12696643	12692348	ENSG00000132004.12	-	protein_coding	KNOWN	FBXW9	3	10	1.186772
chr19	12688922	12689238	12689080	ENSG00000267791.1	+	antisense	KNOWN	CTD-2659N19.2	1	2	1.187514
chr19	12699194	12724011	12711602	ENSG00000105576.15	-	protein_coding	KNOWN	TNPO2	18	26	1.084205
chr19	12706449	12706518	12706483	ENSG00000209702.1	-	snoRNA	KNOWN	SNORD41	1	1	1.186555
chr19	12725517	12725886	12725701	ENSG00000267004.1	-	lincRNA	KNOWN	CTD-2659N19.4	1	2	1.005280
chr19	12730640	12734775	12732707	ENSG00000123144.10	-	protein_coding	KNOWN	C19orf43	5	3	1.189767
chr19	12737139	12748323	12742731	ENSG00000198356.11	+	protein_coding	KNOWN	ASNA1	5	8	1.189767
chr19	12751702	12758458	12755080	ENSG00000039987.6	+	protein_coding	KNOWN	BEST2	4	10	1.223015
chr19	12763003	12872740	12817871	ENSG00000095066.11	-	protein_coding	KNOWN	HOOK2	24	23	1.127079
chr19	12768058	12768189	12768123	ENSG00000281408.1	+	miRNA	NOVEL	AC018761.1	1	1	1.223015
chr19	12781157	12781444	12781300	ENSG00000280783.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.061618
chr19	12784539	12785101	12784820	ENSG00000267212.1	-	lincRNA	KNOWN	CTD-2659N19.9	1	2	1.061618
chr19	12787128	12787192	12787160	ENSG00000263800.1	+	miRNA	KNOWN	MIR5684	1	1	1.061618
chr19	12791496	12793315	12792405	ENSG00000171223.5	+	protein_coding	KNOWN	JUNB	1	1	1.390903
chr19	12796820	12801859	12799339	ENSG00000167815.11	-	protein_coding	KNOWN	PRDX2	6	6	1.390903
chr19	12796823	12801849	12799336	ENSG00000267062.1	+	antisense	KNOWN	CTD-2659N19.10	1	2	1.390903
chr19	12806580	12813638	12810109	ENSG00000104889.4	+	protein_coding	KNOWN	RNASEH2A	4	8	1.247776
chr19	12825478	12835428	12830453	ENSG00000132026.13	-	protein_coding	KNOWN	RTBDN	13	7	1.067122
chr19	12825711	12832983	12829347	ENSG00000267424.1	+	antisense	KNOWN	CTD-2265O21.3	1	3	1.078572
chr19	12833951	12874951	12854451	ENSG00000105613.9	+	protein_coding	KNOWN	MAST1	9	26	1.046242
chr19	12852260	12852327	12852293	ENSG00000276181.1	+	miRNA	KNOWN	MIR6794	1	1	0.966461
chr19	12872661	12872730	12872695	ENSG00000265759.1	-	miRNA	NOVEL	AC020934.1	1	1	1.425416
chr19	12875211	12881468	12878339	ENSG00000105612.8	-	protein_coding	KNOWN	DNASE2	4	6	1.425416
chr19	12880969	12884088	12882528	ENSG00000267735.1	+	antisense	KNOWN	CTD-2265O21.7	1	2	1.425416
chr19	12884423	12887181	12885802	ENSG00000105610.4	-	protein_coding	KNOWN	KLF1	1	3	1.425416
chr19	12891026	12914207	12902616	ENSG00000105607.12	+	protein_coding	KNOWN	GCDH	16	12	1.405757
chr19	12894133	12894880	12894506	ENSG00000240616.1	+	processed_pseudogene	KNOWN	RPS6P25	1	1	1.509718
chr19	12898786	12919276	12909031	ENSG00000161860.7	-	protein_coding	KNOWN	SYCE2	3	6	1.250423
chr19	12920320	12920404	12920362	ENSG00000266721.1	+	miRNA	KNOWN	MIR5695	1	1	0.937017
chr19	12922479	12934037	12928258	ENSG00000179115.10	-	protein_coding	KNOWN	FARSA	10	14	1.007493
chr19	12930522	12933296	12931909	ENSG00000266975.1	+	antisense	KNOWN	FARSA-AS1	1	3	1.138740
chr19	12938578	12944489	12941533	ENSG00000179218.13	+	protein_coding	KNOWN	CALR	7	9	1.138740
chr19	12940484	12940540	12940512	ENSG00000274417.1	+	miRNA	KNOWN	MIR6515	1	1	1.138740
chr19	12944118	12944487	12944302	ENSG00000267458.1	-	antisense	KNOWN	CTC-425F1.4	1	2	1.138740
chr19	12945855	12953642	12949748	ENSG00000179262.9	+	protein_coding	KNOWN	RAD23A	10	9	1.251683
chr19	12953119	12957236	12955177	ENSG00000179271.2	-	protein_coding	KNOWN	GADD45GIP1	1	2	1.380159
chr19	12958855	12958947	12958901	ENSG00000280662.1	+	miRNA	NOVEL	AC092069.1	1	1	1.380159
chr19	12965159	12974762	12969960	ENSG00000179284.5	+	protein_coding	KNOWN	DAND5	2	4	1.222476
chr19	12995608	13098796	13047202	ENSG00000008441.16	+	protein_coding	KNOWN	NFIX	14	11	1.239455
chr19	13013662	13014511	13014086	ENSG00000267417.1	-	antisense	KNOWN	CTC-239J10.1	1	2	1.358385
chr19	13069792	13071374	13070583	ENSG00000267610.2	-	antisense	KNOWN	AC007787.2	1	1	1.319035
chr19	13081966	13082564	13082265	ENSG00000279044.1	+	TEC	KNOWN	AC007787.3	1	1	1.321126
chr19	13099033	13103161	13101097	ENSG00000104903.4	-	protein_coding	KNOWN	LYL1	3	4	1.272564
chr19	13104902	13117567	13111234	ENSG00000104907.12	-	protein_coding	KNOWN	TRMT1	23	18	1.139912
chr19	13118103	13141141	13129622	ENSG00000160877.5	+	protein_coding	KNOWN	NACC1	3	6	1.172678
chr19	13131571	13132410	13131990	ENSG00000266897.1	+	lincRNA	KNOWN	AC005546.2	1	2	1.303047
chr19	13139617	13141147	13140382	ENSG00000267512.1	-	antisense	KNOWN	CTC-250I14.3	1	2	1.303047
chr19	13144058	13150383	13147220	ENSG00000104915.14	-	protein_coding	KNOWN	STX10	11	8	1.313316
chr19	13150415	13154908	13152661	ENSG00000160888.6	+	protein_coding	KNOWN	IER2	3	2	1.472197
chr19	13153071	13154193	13153632	ENSG00000267598.1	-	antisense	KNOWN	CTC-250I14.6	2	2	1.472197
chr19	13157959	13158788	13158373	ENSG00000213253.5	-	processed_pseudogene	KNOWN	RPL12P42	1	2	1.472197
chr19	13206442	13623990	13415216	ENSG00000141837.18	-	protein_coding	KNOWN	CACNA1A	14	48	0.618837
chr19	13375929	13376013	13375971	ENSG00000252177.1	-	miRNA	NOVEL	AC005513.1	1	1	0.371146
chr19	13731760	13763296	13747528	ENSG00000104957.13	+	protein_coding	KNOWN	CCDC130	12	11	1.000744
chr19	13764532	13774282	13769407	ENSG00000037757.13	+	protein_coding	KNOWN	MRI1	6	6	1.101232
chr19	13772118	13774118	13773118	ENSG00000267633.1	-	antisense	KNOWN	CTB-5E10.3	3	2	1.193353
chr19	13774168	13778462	13776315	ENSG00000104979.8	+	protein_coding	KNOWN	C19orf53	6	4	1.193353
chr19	13780070	13790158	13785114	ENSG00000280221.1	-	protein_coding	KNOWN	AC008686.1	1	7	1.192045
chr19	13795460	13832230	13813845	ENSG00000132003.9	+	protein_coding	KNOWN	ZSWIM4	3	13	1.109221
chr19	13796574	13796933	13796753	ENSG00000267582.1	-	antisense	KNOWN	CTD-3252C9.2	1	1	1.110370
chr19	13815062	13815319	13815190	ENSG00000266770.2	-	misc_RNA	KNOWN	RN7SL619P	1	1	1.096699
chr19	13834516	13836289	13835402	ENSG00000267519.3	-	lincRNA	KNOWN	CTD-3252C9.4	1	1	1.213982
chr19	13836287	13836359	13836323	ENSG00000276797.1	-	miRNA	KNOWN	MIR24-2	1	1	1.213982
chr19	13836440	13836517	13836478	ENSG00000207808.1	-	miRNA	KNOWN	MIR27A	1	1	1.213982
chr19	13836587	13836659	13836623	ENSG00000207980.1	-	miRNA	KNOWN	MIR23A	1	1	1.213982
chr19	13862063	13880757	13871410	ENSG00000187556.7	+	protein_coding	KNOWN	NANOS3	4	3	1.078511
chr19	13874699	13874808	13874753	ENSG00000207613.1	+	miRNA	KNOWN	MIR181C	1	1	1.065025
chr19	13874875	13875011	13874943	ENSG00000207585.1	+	miRNA	KNOWN	MIR181D	1	1	1.065025
chr19	13882348	13906452	13894400	ENSG00000132016.11	-	protein_coding	KNOWN	C19orf57	8	8	0.970116
chr19	13906201	13930879	13918540	ENSG00000132024.17	+	protein_coding	KNOWN	CC2D1A	9	29	1.183117
chr19	13931187	13953392	13942289	ENSG00000132000.11	-	protein_coding	KNOWN	PODNL1	13	8	1.328025
chr19	13952492	13961449	13956970	ENSG00000132017.10	+	protein_coding	KNOWN	DCAF15	6	13	1.270795
chr19	13961538	14007039	13984288	ENSG00000132005.8	-	protein_coding	KNOWN	RFX1	7	21	1.340892
chr19	14006422	14006773	14006597	ENSG00000275091.1	+	antisense	KNOWN	CTB-55O6.13	1	1	1.489427
chr19	14028148	14031042	14029595	ENSG00000171136.6	+	protein_coding	KNOWN	RLN3	2	3	0.972229
chr19	14030855	14031557	14031206	ENSG00000267670.1	-	antisense	KNOWN	CTB-55O6.4	1	2	0.908029
chr19	14031748	14053216	14042482	ENSG00000104998.3	+	protein_coding	KNOWN	IL27RA	1	14	0.970134
chr19	14053365	14059159	14056262	ENSG00000187867.8	-	protein_coding	KNOWN	PALM3	3	6	1.322476
chr19	14070342	14071237	14070789	ENSG00000228887.3	+	processed_pseudogene	KNOWN	EEF1DP1	1	1	1.271161
chr19	14072536	14075062	14073799	ENSG00000141854.7	+	protein_coding	KNOWN	CTB-55O6.8	4	4	1.271161
chr19	14073361	14073479	14073420	ENSG00000277805.1	+	miRNA	KNOWN	MIR1199	1	1	1.271161
chr19	14081619	14085875	14083747	ENSG00000188032.9	-	protein_coding	KNOWN	C19orf67	3	6	1.271161
chr19	14087840	14091036	14089438	ENSG00000141858.11	-	protein_coding	KNOWN	SAMD1	3	5	1.201508
chr19	14091688	14118084	14104886	ENSG00000072062.13	-	protein_coding	KNOWN	PRKACA	10	10	1.154867
chr19	14119106	14119537	14119321	ENSG00000267783.1	+	antisense	KNOWN	CTB-55O6.10	1	2	1.377664
chr19	14119509	14136956	14128232	ENSG00000105011.8	-	protein_coding	KNOWN	ASF1B	5	4	1.161119
chr19	14137179	14171267	14154223	ENSG00000267169.1	+	antisense	KNOWN	CTB-55O6.12	3	3	0.865754
chr19	14147743	14206187	14176965	ENSG00000072071.16	-	protein_coding	KNOWN	ADGRL1	8	24	0.902138
chr19	14163039	14163183	14163111	ENSG00000281044.1	+	miRNA	NOVEL	AC022098.2	1	1	0.880046
chr19	14163314	14163429	14163371	ENSG00000280483.1	+	miRNA	NOVEL	AC022098.1	1	1	0.880046
chr19	14213052	14213323	14213187	ENSG00000240803.3	+	misc_RNA	KNOWN	RN7SL231P	1	1	1.091992
chr19	14213241	14213321	14213281	ENSG00000280955.1	+	miRNA	NOVEL	AC011509.1	1	1	1.091992
chr19	14254189	14293205	14273697	ENSG00000267723.1	-	lincRNA	KNOWN	CTD-2189E23.1	1	5	0.808563
chr19	14267807	14269377	14268592	ENSG00000267406.1	-	lincRNA	KNOWN	CTD-2189E23.2	1	2	0.844899
chr19	14305458	14370196	14337827	ENSG00000266913.1	-	lincRNA	KNOWN	CTC-548K16.2	2	4	0.827579
chr19	14333743	14343916	14338829	ENSG00000267147.2	+	lincRNA	KNOWN	CTC-548K16.1	1	2	0.584590
chr19	14380501	14408725	14394613	ENSG00000123146.19	+	protein_coding	KNOWN	ADGRE5	16	20	0.926887
chr19	14402717	14408723	14405720	ENSG00000267379.1	-	antisense	KNOWN	CTC-548K16.5	1	2	0.916625
chr19	14408819	14419383	14414101	ENSG00000123136.14	-	protein_coding	KNOWN	DDX39A	21	11	1.125724
chr19	14433053	14471867	14452460	ENSG00000123143.12	+	protein_coding	KNOWN	PKN1	15	22	0.838536
chr19	14458401	14459366	14458883	ENSG00000267474.1	+	sense_intronic	KNOWN	CTC-548K16.6	1	2	0.781652
chr19	14472466	14475362	14473914	ENSG00000160951.3	-	protein_coding	KNOWN	PTGER1	1	3	1.165770
chr19	14477760	14496149	14486954	ENSG00000123159.15	-	protein_coding	KNOWN	GIPC1	13	9	1.141096
chr19	14489388	14489609	14489498	ENSG00000224543.4	+	processed_pseudogene	KNOWN	SNRPGP15	1	1	1.165770
chr19	14514770	14529770	14522270	ENSG00000132002.7	-	protein_coding	KNOWN	DNAJB1	11	4	1.036594
chr19	14517085	14565980	14541532	ENSG00000099797.11	+	protein_coding	KNOWN	TECR	25	14	0.947498
chr19	14529543	14529640	14529591	ENSG00000207707.1	+	miRNA	KNOWN	MIR639	1	1	1.036594
chr19	14566078	14572062	14569070	ENSG00000099795.6	-	protein_coding	KNOWN	NDUFB7	2	3	0.863636
chr19	14583084	14611157	14597120	ENSG00000187912.11	+	protein_coding	KNOWN	CLEC17A	4	14	0.574402
chr19	14584095	14584395	14584245	ENSG00000243488.3	+	misc_RNA	KNOWN	RN7SL337P	1	1	1.043737
chr19	14588357	14588656	14588506	ENSG00000243066.3	+	misc_RNA	KNOWN	RN7SL842P	1	1	1.043737
chr19	14619117	14690027	14654572	ENSG00000131355.14	-	protein_coding	KNOWN	ADGRE3	5	16	0.268456
chr19	14621634	14622242	14621938	ENSG00000269378.1	-	processed_pseudogene	KNOWN	ITGB1P1	1	1	0.410600
chr19	14628599	14628801	14628700	ENSG00000275432.1	+	processed_pseudogene	KNOWN	CTD-3093B17.2	1	1	0.410600
chr19	14689801	14733746	14711773	ENSG00000160961.11	+	protein_coding	KNOWN	ZNF333	10	12	0.497162
chr19	14732393	14778541	14755467	ENSG00000127507.17	-	protein_coding	KNOWN	ADGRE2	13	21	0.237510
chr19	14792318	14792533	14792425	ENSG00000256210.3	+	processed_pseudogene	KNOWN	AC005255.3	1	1	0.131305
chr19	14792490	14835376	14813933	ENSG00000188269.8	-	protein_coding	KNOWN	OR7A5	5	4	0.069924
chr19	14799146	14800211	14799678	ENSG00000127530.2	-	protein_coding	KNOWN	OR7C1	1	1	0.131305
chr19	14840948	14841877	14841412	ENSG00000127515.1	-	protein_coding	KNOWN	OR7A10	1	1	-0.121839
chr19	14852032	14852944	14852488	ENSG00000269552.1	-	unprocessed_pseudogene	KNOWN	AC005255.5	1	1	0.238310
chr19	14863786	14864715	14864250	ENSG00000172148.2	-	unprocessed_pseudogene	KNOWN	AC005255.6	1	1	0.238310
chr19	14880426	14881452	14880939	ENSG00000185385.3	-	protein_coding	KNOWN	OR7A17	1	1	0.044426
chr19	14886839	14887115	14886977	ENSG00000269678.1	-	unprocessed_pseudogene	KNOWN	OR7A18P	1	1	0.044426
chr19	14891895	14892804	14892349	ENSG00000268834.1	-	unprocessed_pseudogene	KNOWN	OR7A1P	1	1	-0.065837
chr19	14903232	14904138	14903685	ENSG00000269787.2	-	unprocessed_pseudogene	KNOWN	OR7A3P	1	1	-0.065837
chr19	14916428	14917380	14916904	ENSG00000198367.3	+	unprocessed_pseudogene	KNOWN	OR7A11P	1	1	0.187340
chr19	14927058	14928024	14927541	ENSG00000176923.4	+	unprocessed_pseudogene	KNOWN	OR7A15P	1	2	0.187340
chr19	14941489	14942448	14941968	ENSG00000127529.7	+	protein_coding	KNOWN	OR7C2	1	1	0.000651
chr19	14950034	15022990	14986512	ENSG00000105143.12	-	protein_coding	KNOWN	SLC1A6	11	9	0.323292
chr19	15010744	15023269	15017006	ENSG00000160994.3	+	protein_coding	KNOWN	CCDC105	1	7	0.174028
chr19	15049384	15058293	15053838	ENSG00000105141.5	+	protein_coding	KNOWN	CASP14	2	7	0.515227
chr19	15052930	15053074	15053002	ENSG00000223201.1	+	miRNA	NOVEL	AC004699.1	1	1	0.526223
chr19	15086980	15088221	15087600	ENSG00000094661.2	+	protein_coding	KNOWN	OR1I1	1	1	0.381498
chr19	15107403	15114988	15111195	ENSG00000105137.12	+	protein_coding	KNOWN	SYDE1	5	8	0.849426
chr19	15114984	15125785	15120384	ENSG00000105135.15	-	protein_coding	KNOWN	ILVBL	14	16	0.986238
chr19	15124160	15126174	15125167	ENSG00000268564.1	+	antisense	KNOWN	AC003956.1	1	3	0.986238
chr19	15141132	15142038	15141585	ENSG00000267961.1	-	unprocessed_pseudogene	KNOWN	OR10B1P	1	1	0.948256
chr19	15145215	15145318	15145266	ENSG00000252661.1	+	snRNA	KNOWN	RNU6-782P	1	1	0.948256
chr19	15159038	15200981	15180009	ENSG00000074181.8	-	protein_coding	KNOWN	NOTCH3	6	33	0.833227
chr19	15179283	15179350	15179316	ENSG00000275711.1	-	miRNA	KNOWN	MIR6795	1	1	0.909400
chr19	15221015	15222297	15221656	ENSG00000269635.1	-	lincRNA	KNOWN	AC004257.1	1	2	0.943234
chr19	15226919	15233435	15230177	ENSG00000105131.7	-	protein_coding	KNOWN	EPHX3	4	9	1.078978
chr19	15235519	15332545	15284032	ENSG00000141867.17	-	protein_coding	KNOWN	BRD4	12	20	1.113699
chr19	15338948	15339237	15339092	ENSG00000270802.2	+	processed_pseudogene	KNOWN	AC005776.1	1	1	0.942168
chr19	15346068	15348417	15347242	ENSG00000273218.1	-	lincRNA	KNOWN	LLNLR-246C6.1	1	2	0.942168
chr19	15353385	15379798	15366591	ENSG00000105127.8	-	protein_coding	KNOWN	AKAP8	5	14	1.059162
chr19	15379076	15381194	15380135	ENSG00000268189.2	+	processed_transcript	KNOWN	AC005785.2	2	2	1.178292
chr19	15380048	15419141	15399594	ENSG00000011243.17	-	protein_coding	KNOWN	AKAP8L	20	16	0.931127
chr19	15383202	15383832	15383517	ENSG00000279203.1	-	TEC	KNOWN	AC005785.5	1	1	1.178292
chr19	15398696	15400356	15399526	ENSG00000279716.1	+	TEC	KNOWN	AC006128.2	1	1	0.958441
chr19	15419980	15449951	15434965	ENSG00000011451.17	-	protein_coding	KNOWN	WIZ	8	9	0.977717
chr19	15449548	15449608	15449578	ENSG00000269782.1	+	miRNA	KNOWN	MIR1470	1	1	1.166216
chr19	15451624	15464571	15458097	ENSG00000105122.12	-	protein_coding	KNOWN	RASAL3	7	18	1.101037
chr19	15468645	15498956	15483800	ENSG00000161031.12	-	protein_coding	KNOWN	PGLYRP2	4	5	0.648283
chr19	15508493	15552317	15530405	ENSG00000171954.12	+	protein_coding	KNOWN	CYP4F22	2	14	0.748910
chr19	15515342	15516836	15516089	ENSG00000269765.2	-	unprocessed_pseudogene	KNOWN	CTB-187L3.1	1	3	0.796536
chr19	15564074	15584709	15574391	ENSG00000269516.6	+	transcribed_unprocessed_pseudogene	KNOWN	CYP4F23P	2	12	0.520720
chr19	15611623	15611909	15611766	ENSG00000267135.2	-	processed_pseudogene	KNOWN	AD000091.3	1	1	0.611770
chr19	15611657	15612122	15611889	ENSG00000225067.4	+	processed_pseudogene	KNOWN	RPL23AP2	1	1	0.611770
chr19	15613247	15614553	15613900	ENSG00000266951.2	-	lincRNA	KNOWN	AD000091.2	1	2	0.611770
chr19	15615218	15630638	15622928	ENSG00000186526.12	+	protein_coding	KNOWN	CYP4F8	12	13	0.599311
chr19	15615617	15662825	15639221	ENSG00000186529.14	+	protein_coding	KNOWN	CYP4F3	10	13	0.423447
chr19	15664106	15669826	15666966	ENSG00000267241.2	+	unprocessed_pseudogene	KNOWN	CYP4F10P	1	6	0.387448
chr19	15672757	15697174	15684965	ENSG00000186204.14	+	protein_coding	KNOWN	CYP4F12	17	13	0.583068
chr19	15728020	15729060	15728540	ENSG00000171942.4	+	protein_coding	KNOWN	OR10H2	1	1	0.123527
chr19	15741393	15742343	15741868	ENSG00000171936.1	+	protein_coding	KNOWN	OR10H3	1	1	0.460379
chr19	15760241	15779909	15770075	ENSG00000267594.5	-	unprocessed_pseudogene	KNOWN	CYP4F24P	1	11	0.083331
chr19	15760375	15770828	15765601	ENSG00000268673.3	+	lincRNA	KNOWN	LLNLR-249E10.1	1	2	-0.257108
chr19	15793951	15795082	15794516	ENSG00000172519.8	+	protein_coding	KNOWN	OR10H5	1	1	0.331745
chr19	15807003	15808126	15807564	ENSG00000186723.3	-	protein_coding	KNOWN	OR10H1	1	1	0.331745
chr19	15821796	15823797	15822796	ENSG00000267235.2	-	unprocessed_pseudogene	KNOWN	ZNF861P	1	2	0.338504
chr19	15827045	15835853	15831449	ENSG00000267308.1	-	lincRNA	KNOWN	AC004510.3	2	2	0.368104
chr19	15828961	15836320	15832640	ENSG00000214049.6	+	processed_transcript	KNOWN	UCA1	3	3	0.376759
chr19	15834730	15834804	15834767	ENSG00000273782.1	+	misc_RNA	NOVEL	UCA1	1	1	0.383041
chr19	15851993	15864904	15858448	ENSG00000267453.6	-	lincRNA	KNOWN	AC004791.2	2	3	0.336614
chr19	15871667	15871852	15871759	ENSG00000273330.1	-	unprocessed_pseudogene	KNOWN	CYP4F36P	1	1	0.436437
chr19	15878023	15898120	15888071	ENSG00000186115.12	-	protein_coding	KNOWN	CYP4F2	8	13	0.422957
chr19	15902300	15903238	15902769	ENSG00000267218.2	-	processed_pseudogene	KNOWN	AC005336.5	1	1	0.403078
chr19	15904556	15907234	15905895	ENSG00000279717.1	+	TEC	KNOWN	LLNLF-158E9.1	1	1	0.403078
chr19	15910582	15911824	15911203	ENSG00000267056.2	-	processed_pseudogene	KNOWN	AC005336.4	1	1	-0.067364
chr19	15912367	15934867	15923617	ENSG00000171903.16	-	protein_coding	KNOWN	CYP4F11	5	13	0.037034
chr19	15949008	15949958	15949483	ENSG00000176231.1	+	protein_coding	KNOWN	OR10H4	1	1	0.415168
chr19	15979835	15999020	15989427	ENSG00000267392.3	-	unprocessed_pseudogene	KNOWN	CYP4F9P	1	12	0.364401
chr19	16015287	16027462	16021374	ENSG00000205396.11	+	processed_transcript	KNOWN	LINC00661	7	9	0.547836
chr19	16019719	16020290	16020004	ENSG00000280412.1	+	TEC	KNOWN	AC114273.3	1	1	0.547836
chr19	16031307	16042116	16036711	ENSG00000167459.16	+	processed_transcript	KNOWN	LINC00905	7	5	0.897029
chr19	16034776	16036537	16035656	ENSG00000267609.2	-	processed_pseudogene	KNOWN	SNX33P1	1	1	0.897029
chr19	16037009	16038455	16037732	ENSG00000277766.1	-	unprocessed_pseudogene	KNOWN	LLNLF-136C3.1	1	3	0.897029
chr19	16051929	16052689	16052309	ENSG00000267450.1	+	processed_pseudogene	KNOWN	OR1AB1P	1	1	0.621850
chr19	16065737	16066312	16066024	ENSG00000267517.1	+	lincRNA	KNOWN	CTD-2231E14.4	1	3	0.621850
chr19	16067021	16103005	16085013	ENSG00000167460.14	+	protein_coding	KNOWN	TPM4	16	9	1.055595
chr19	16074293	16077395	16075844	ENSG00000279198.1	-	TEC	KNOWN	CTD-2231E14.2	1	1	0.997664
chr19	16103761	16104254	16104007	ENSG00000267373.1	-	lincRNA	KNOWN	CTD-2231E14.5	1	2	1.243995
chr19	16111629	16134234	16122931	ENSG00000167461.11	+	protein_coding	KNOWN	RAB8A	7	8	0.888908
chr19	16123661	16139892	16131776	ENSG00000269243.1	-	antisense	KNOWN	CTD-2231E14.8	2	2	0.834936
chr19	16134028	16158575	16146301	ENSG00000196684.12	+	protein_coding	KNOWN	HSH2D	8	8	0.754604
chr19	16161368	16173525	16167446	ENSG00000141977.9	-	protein_coding	KNOWN	CIB3	4	6	0.713789
chr19	16185380	16192046	16188713	ENSG00000105058.11	+	protein_coding	KNOWN	FAM32A	5	5	0.831612
chr19	16186276	16189458	16187867	ENSG00000267033.1	-	antisense	KNOWN	CTD-2562J15.4	1	2	0.752505
chr19	16187313	16187566	16187439	ENSG00000275901.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.752505
chr19	16197578	16245907	16221742	ENSG00000072958.8	+	protein_coding	KNOWN	AP1M1	15	13	0.940906
chr19	16283359	16324514	16303936	ENSG00000267275.1	-	antisense	KNOWN	CTD-2562J15.6	2	3	0.926498
chr19	16324817	16327874	16326345	ENSG00000127528.5	+	protein_coding	KNOWN	KLF2	2	3	0.983545
chr19	16352462	16353182	16352822	ENSG00000277825.1	-	lincRNA	KNOWN	CTD-2013N17.7	1	1	0.862169
chr19	16355239	16472085	16413662	ENSG00000127527.13	-	protein_coding	KNOWN	EPS15L1	16	24	1.012295
chr19	16356329	16358327	16357328	ENSG00000280332.1	-	TEC	KNOWN	CTD-2013N17.6	1	1	0.862169
chr19	16412684	16413576	16413130	ENSG00000240418.1	+	processed_pseudogene	KNOWN	CTD-2013N17.1	1	1	0.970001
chr19	16440946	16443584	16442265	ENSG00000267703.1	+	antisense	KNOWN	CTD-2013N17.4	1	2	0.948026
chr19	16479057	16496192	16487624	ENSG00000269058.5	-	protein_coding	KNOWN	CALR3	3	9	0.812823
chr19	16479067	16628204	16553635	ENSG00000141979.4	-	protein_coding	KNOWN	CTD-3222D19.2	1	12	0.964783
chr19	16496311	16521352	16508831	ENSG00000105072.8	+	protein_coding	KNOWN	C19orf44	8	9	0.927753
chr19	16517889	16542530	16530209	ENSG00000085872.14	-	protein_coding	KNOWN	CHERP	7	17	1.168997
chr19	16539688	16539984	16539836	ENSG00000240106.2	-	misc_RNA	KNOWN	RN7SL146P	1	1	1.333396
chr19	16542746	16544814	16543780	ENSG00000269399.2	+	lincRNA	KNOWN	CTD-3222D19.12	1	1	1.333396
chr19	16549831	16572382	16561106	ENSG00000127526.13	-	protein_coding	KNOWN	SLC35E1	11	6	0.840864
chr19	16551773	16552328	16552050	ENSG00000268309.1	+	antisense	KNOWN	CTD-3222D19.11	1	2	0.799015
chr19	16565551	16566330	16565940	ENSG00000269085.1	+	antisense	KNOWN	CTD-3222D19.10	1	2	0.799015
chr19	16572624	16575340	16573982	ENSG00000279529.1	+	antisense	KNOWN	CTD-3222D19.8	1	1	1.157368
chr19	16574907	16629062	16601984	ENSG00000105085.10	-	protein_coding	KNOWN	MED26	7	4	0.927075
chr19	16577642	16660115	16618878	ENSG00000268790.5	-	protein_coding	KNOWN	CTC-429P9.4	7	8	0.972577
chr19	16586905	16589409	16588157	ENSG00000279748.1	+	TEC	KNOWN	CTD-3222D19.9	1	1	1.157368
chr19	16586905	16587985	16587445	ENSG00000269578.1	-	sense_intronic	KNOWN	CTD-3222D19.5	1	1	1.157368
chr19	16610374	16612203	16611288	ENSG00000279977.1	-	TEC	KNOWN	CTD-3222D19.4	1	1	0.631725
chr19	16610411	16636531	16623471	ENSG00000268087.1	+	lincRNA	KNOWN	CTC-429P9.2	1	2	0.774069
chr19	16630743	16643942	16637342	ENSG00000269427.1	+	antisense	KNOWN	CTC-429P9.1	2	2	1.200926
chr19	16630751	16660442	16645596	ENSG00000214046.8	-	protein_coding	KNOWN	SMIM7	21	6	1.076173
chr19	16633797	16635269	16634533	ENSG00000269044.2	-	sense_intronic	KNOWN	CTC-429P9.3	1	1	1.200926
chr19	16639967	16640668	16640317	ENSG00000267904.1	-	sense_intronic	KNOWN	CTC-429P9.5	1	2	1.200926
chr19	16661127	16690029	16675578	ENSG00000072954.6	+	protein_coding	KNOWN	TMEM38A	3	6	0.681615
chr19	16712317	16712434	16712375	ENSG00000269419.1	+	processed_pseudogene	KNOWN	CTD-2538G9.3	1	1	0.591346
chr19	16719976	16817963	16768969	ENSG00000188039.13	+	protein_coding	KNOWN	NWD1	6	21	0.631683
chr19	16801426	16801714	16801570	ENSG00000269799.1	+	sense_intronic	KNOWN	CTD-2538G9.6	1	2	0.582467
chr19	16829400	16880353	16854876	ENSG00000127511.9	+	protein_coding	KNOWN	SIN3B	12	20	0.910649
chr19	16844025	16846473	16845249	ENSG00000268743.1	+	sense_intronic	KNOWN	CTD-2538G9.5	1	2	0.700509
chr19	16888860	16892606	16890733	ENSG00000127533.3	+	protein_coding	KNOWN	F2RL3	2	2	1.014478
chr19	16892947	17026815	16959881	ENSG00000160111.12	-	protein_coding	KNOWN	CPAMD8	20	42	0.636447
chr19	16907462	16907723	16907592	ENSG00000264250.2	+	misc_RNA	KNOWN	RN7SL835P	1	1	0.931527
chr19	16910490	16910784	16910637	ENSG00000263595.2	-	misc_RNA	KNOWN	RN7SL823P	1	1	0.765181
chr19	16910496	16910579	16910537	ENSG00000280536.1	-	miRNA	NOVEL	AC008737.1	1	1	0.765181
chr19	17009189	17013460	17011324	ENSG00000268985.1	+	antisense	KNOWN	CTD-2528A14.1	1	2	0.641985
chr19	17049729	17075625	17062677	ENSG00000131351.14	-	protein_coding	KNOWN	HAUS8	8	11	0.806259
chr19	17051994	17055087	17053540	ENSG00000268289.1	+	antisense	KNOWN	CTD-2528A14.3	1	2	0.845636
chr19	17075781	17214537	17145159	ENSG00000099331.13	+	protein_coding	KNOWN	MYO9B	19	40	1.093527
chr19	17095418	17099307	17097362	ENSG00000269066.1	-	antisense	KNOWN	CTD-2528A14.5	1	2	1.125050
chr19	17152588	17168051	17160319	ENSG00000268056.5	-	antisense	KNOWN	CTD-3032J10.2	2	4	1.077394
chr19	17177511	17178476	17177993	ENSG00000269836.1	-	antisense	KNOWN	CTD-3032J10.4	1	2	1.161926
chr19	17207138	17208010	17207574	ENSG00000269480.1	-	antisense	KNOWN	CTD-3032J10.3	1	2	1.159499
chr19	17215346	17219829	17217587	ENSG00000053501.12	+	protein_coding	KNOWN	USE1	10	8	1.306586
chr19	17226204	17229219	17227711	ENSG00000099330.8	+	protein_coding	KNOWN	OCEL1	15	6	1.306586
chr19	17231883	17245940	17238911	ENSG00000160113.5	-	protein_coding	KNOWN	NR2F6	2	4	1.255817
chr19	17235940	17255448	17245694	ENSG00000269095.1	-	protein_coding	KNOWN	AC010646.3	1	5	1.249187
chr19	17249176	17282786	17265981	ENSG00000130307.11	-	protein_coding	KNOWN	USHBP1	10	14	1.117552
chr19	17267350	17281249	17274299	ENSG00000105393.15	+	protein_coding	KNOWN	BABAM1	18	9	0.987183
chr19	17267418	17282966	17275192	ENSG00000269307.1	+	protein_coding	KNOWN	CTD-2278I10.6	1	10	0.979743
chr19	17281645	17287646	17284645	ENSG00000160117.14	+	protein_coding	KNOWN	ANKLE1	9	9	0.929517
chr19	17292131	17310236	17301183	ENSG00000127220.5	-	protein_coding	KNOWN	ABHD8	3	5	1.019931
chr19	17292609	17306843	17299726	ENSG00000130312.6	+	protein_coding	KNOWN	MRPL34	6	4	1.014513
chr19	17296196	17296695	17296445	ENSG00000269815.1	-	sense_intronic	KNOWN	CTD-2278I10.4	1	1	1.014513
chr19	17309518	17323301	17316409	ENSG00000130311.10	+	protein_coding	KNOWN	DDA1	5	6	1.413935
chr19	17323223	17334829	17329026	ENSG00000074855.10	-	protein_coding	KNOWN	ANO8	4	18	1.328640
chr19	17334920	17342735	17338827	ENSG00000130299.16	+	protein_coding	KNOWN	GTPBP3	28	9	1.188717
chr19	17351448	17377350	17364399	ENSG00000130300.8	-	protein_coding	KNOWN	PLVAP	3	6	1.126407
chr19	17360932	17362753	17361842	ENSG00000269350.1	+	antisense	KNOWN	CTD-2278I10.1	1	2	1.215374
chr19	17391429	17392284	17391856	ENSG00000269720.1	-	lincRNA	KNOWN	CTD-2521M24.5	1	1	0.658576
chr19	17402939	17405648	17404293	ENSG00000130303.12	-	protein_coding	KNOWN	BST2	3	5	0.658576
chr19	17405694	17418904	17412299	ENSG00000282851.1	+	lincRNA	KNOWN	BISPR	13	5	0.947267
chr19	17405722	17433724	17419723	ENSG00000141971.12	+	protein_coding	KNOWN	MVB12A	14	10	1.008178
chr19	17414257	17422324	17418290	ENSG00000269481.1	-	antisense	KNOWN	CTD-2521M24.6	1	2	1.086830
chr19	17417031	17418288	17417659	ENSG00000254503.1	-	processed_pseudogene	KNOWN	CTD-2521M24.4	1	1	1.086830
chr19	17419305	17419774	17419539	ENSG00000269053.1	-	antisense	KNOWN	CTD-2521M24.8	1	1	1.086830
chr19	17435509	17448567	17442038	ENSG00000188051.6	-	protein_coding	KNOWN	TMEM221	2	3	0.987294
chr19	17436611	17460804	17448707	ENSG00000269035.1	-	protein_coding	KNOWN	CTD-2521M24.10	1	4	0.916578
chr19	17452211	17452969	17452590	ENSG00000269736.1	-	lincRNA	KNOWN	CTD-2521M24.11	1	1	0.828957
chr19	17455425	17460954	17458189	ENSG00000171773.2	-	protein_coding	KNOWN	NXNL1	1	2	0.828957
chr19	17457257	17457357	17457307	ENSG00000222805.1	+	miRNA	NOVEL	AC010319.1	1	1	0.828957
chr19	17468769	17506168	17487468	ENSG00000130304.16	+	protein_coding	KNOWN	SLC27A1	9	13	1.237654
chr19	17488990	17511889	17500439	ENSG00000269439.5	-	lincRNA	KNOWN	CTD-3131K8.2	4	3	1.203332
chr19	17511629	17521288	17516458	ENSG00000130313.6	+	protein_coding	KNOWN	PGLS	6	6	0.882273
chr19	17518330	17520565	17519447	ENSG00000269161.1	-	antisense	KNOWN	CTD-3131K8.3	1	2	0.882273
chr19	17523301	17553839	17538570	ENSG00000167483.17	+	protein_coding	KNOWN	FAM129C	12	16	0.954122
chr19	17555594	17583162	17569378	ENSG00000130309.10	+	protein_coding	KNOWN	COLGALT1	6	12	1.204127
chr19	17589595	17590071	17589833	ENSG00000243771.1	-	processed_pseudogene	KNOWN	CTD-3131K8.1	1	1	1.196127
chr19	17601328	17688365	17644846	ENSG00000130477.14	-	protein_coding	KNOWN	UNC13A	8	45	0.981220
chr19	17613722	17614430	17614076	ENSG00000269752.1	+	antisense	KNOWN	CTD-3149D2.3	1	2	1.000069
chr19	17622447	17623338	17622892	ENSG00000279300.1	+	TEC	KNOWN	CTD-3149D2.2	1	1	1.000069
chr19	17719242	17734516	17726879	ENSG00000130479.10	+	protein_coding	KNOWN	MAP1S	21	7	0.850544
chr19	17727840	17734513	17731176	ENSG00000268112.1	-	antisense	KNOWN	CTD-3149D2.4	1	3	0.967017
chr19	17747718	17788568	17768143	ENSG00000130475.14	+	protein_coding	KNOWN	FCHO1	36	29	0.786138
chr19	17794828	17813082	17803955	ENSG00000179913.10	+	protein_coding	KNOWN	B3GNT3	4	3	0.986871
chr19	17816512	17821574	17819043	ENSG00000248099.3	-	protein_coding	KNOWN	INSL3	3	3	0.890577
chr19	17824780	17848071	17836425	ENSG00000105639.18	-	protein_coding	KNOWN	JAK3	7	24	1.091943
chr19	17859876	17864153	17862014	ENSG00000105640.12	+	protein_coding	KNOWN	RPL18A	7	6	0.881365
chr19	17862588	17862720	17862654	ENSG00000207166.1	+	snoRNA	KNOWN	SNORA68	1	1	0.881365
chr19	17871273	17871705	17871489	ENSG00000279617.1	-	TEC	KNOWN	AC005796.2	1	1	1.182594
chr19	17871973	17895174	17883573	ENSG00000105641.3	+	protein_coding	KNOWN	SLC5A5	2	15	1.097343
chr19	17933016	17943991	17938503	ENSG00000007080.10	+	protein_coding	KNOWN	CCDC124	4	5	1.021831
chr19	17951293	18000080	17975686	ENSG00000105642.15	+	protein_coding	KNOWN	KCNN1	4	11	1.225620
chr19	17972025	17972117	17972071	ENSG00000252591.1	+	rRNA	KNOWN	RNA5SP468	1	1	1.213982
chr19	18001132	18014102	18007617	ENSG00000105643.9	+	protein_coding	KNOWN	ARRDC2	9	8	1.168187
chr19	18009440	18009881	18009660	ENSG00000279172.1	-	TEC	KNOWN	CTB-52I2.7	1	1	1.209732
chr19	18022403	18032099	18027251	ENSG00000273654.1	+	transcribed_processed_pseudogene	KNOWN	CTB-52I2.4	2	2	1.066810
chr19	18040355	18041083	18040719	ENSG00000268623.2	+	processed_pseudogene	KNOWN	CTB-52I2.3	1	1	1.024878
chr19	18048637	18049090	18048863	ENSG00000243455.3	+	processed_pseudogene	KNOWN	RPS18P13	1	1	1.024878
chr19	18058995	18098944	18078969	ENSG00000096996.15	-	protein_coding	KNOWN	IL12RB1	7	18	0.858202
chr19	18097793	18151692	18124742	ENSG00000099308.10	+	protein_coding	KNOWN	MAST3	5	27	1.143317
chr19	18144522	18151691	18148106	ENSG00000269145.2	-	antisense	KNOWN	AC007192.6	1	2	1.175888
chr19	18153118	18170540	18161829	ENSG00000105647.14	+	protein_coding	KNOWN	PIK3R2	8	16	1.385015
chr19	18153158	18178117	18165637	ENSG00000268173.1	+	protein_coding	KNOWN	AC007192.4	1	25	1.320140
chr19	18173162	18178117	18175639	ENSG00000216490.3	+	protein_coding	KNOWN	IFI30	3	7	1.171350
chr19	18193182	18196948	18195065	ENSG00000254858.9	+	protein_coding	KNOWN	MPV17L2	4	5	0.838235
chr19	18196784	18204074	18200429	ENSG00000105649.9	-	protein_coding	KNOWN	RAB3A	4	5	0.838235
chr19	18204730	18220480	18212605	ENSG00000268650.3	+	antisense	KNOWN	AC068499.10	3	6	1.106039
chr19	18207961	18255419	18231690	ENSG00000105650.21	-	protein_coding	KNOWN	PDE4C	17	19	1.086569
chr19	18257097	18274509	18265803	ENSG00000130518.16	-	protein_coding	KNOWN	KIAA1683	9	5	1.231343
chr19	18279760	18281622	18280691	ENSG00000130522.5	-	protein_coding	KNOWN	JUND	2	2	1.314384
chr19	18282077	18282161	18282119	ENSG00000267959.3	+	miRNA	KNOWN	MIR3188	1	1	1.314384
chr19	18285343	18285495	18285419	ENSG00000241464.3	-	processed_pseudogene	KNOWN	RPL39P38	1	1	1.314384
chr19	18306230	18323274	18314752	ENSG00000130520.10	-	protein_coding	KNOWN	LSM4	6	6	1.342871
chr19	18333276	18333573	18333424	ENSG00000239821.3	+	misc_RNA	KNOWN	RN7SL513P	1	1	1.227579
chr19	18340587	18369950	18355268	ENSG00000130517.13	+	protein_coding	KNOWN	PGPEP1	9	6	1.055327
chr19	18374731	18389176	18381953	ENSG00000130513.6	+	protein_coding	KNOWN	GDF15	5	3	0.971137
chr19	18386562	18386634	18386598	ENSG00000264175.1	+	miRNA	KNOWN	MIR3189	1	1	0.971137
chr19	18391144	18397617	18394380	ENSG00000175489.9	-	protein_coding	KNOWN	LRRC25	2	3	1.079643
chr19	18418864	18434562	18426713	ENSG00000130511.15	+	protein_coding	KNOWN	SSBP4	15	18	1.547828
chr19	18434388	18438301	18436344	ENSG00000105655.18	-	protein_coding	KNOWN	ISYNA1	14	11	1.661847
chr19	18441419	18443597	18442508	ENSG00000268199.2	+	antisense	KNOWN	CTD-3137H5.1	1	2	1.661847
chr19	18442663	18522127	18482395	ENSG00000105656.12	-	protein_coding	KNOWN	ELL	6	13	1.220821
chr19	18448275	18448805	18448540	ENSG00000280121.1	-	TEC	KNOWN	CTD-3137H5.4	1	1	1.661847
chr19	18448275	18448802	18448538	ENSG00000279262.1	+	TEC	KNOWN	CTD-3137H5.5	1	1	1.661847
chr19	18531613	18532632	18532122	ENSG00000268938.2	+	antisense	KNOWN	AC005387.3	1	2	1.071113
chr19	18531751	18544077	18537914	ENSG00000105701.15	-	protein_coding	KNOWN	FKBP8	14	9	1.071113
chr19	18532908	18536188	18534548	ENSG00000269191.1	+	antisense	KNOWN	AC005387.2	1	2	1.071113
chr19	18557762	18569387	18563574	ENSG00000105700.10	+	protein_coding	KNOWN	KXD1	17	6	0.945322
chr19	18557775	18561560	18559667	ENSG00000268030.1	-	antisense	KNOWN	AC005253.2	1	2	0.945322
chr19	18568506	18569375	18568940	ENSG00000268983.1	-	antisense	KNOWN	AC005253.4	1	2	0.945322
chr19	18571730	18577550	18574640	ENSG00000221983.7	+	protein_coding	KNOWN	UBA52	14	6	1.223636
chr19	18572220	18607741	18589980	ENSG00000006016.10	-	protein_coding	KNOWN	CRLF1	5	9	1.168784
chr19	18588685	18592336	18590510	ENSG00000006015.17	+	protein_coding	KNOWN	C19orf60	8	5	1.153342
chr19	18607430	18621039	18614234	ENSG00000105696.8	+	protein_coding	KNOWN	TMEM59L	5	9	1.188023
chr19	18631646	18631908	18631777	ENSG00000263490.2	-	misc_RNA	KNOWN	RN7SL155P	1	1	0.717462
chr19	18636965	18671714	18654339	ENSG00000167487.11	+	protein_coding	KNOWN	KLHL26	6	4	0.990116
chr19	18683677	18782333	18733005	ENSG00000105662.15	+	protein_coding	KNOWN	CRTC1	4	15	1.243550
chr19	18782773	18791314	18787043	ENSG00000105664.10	-	protein_coding	KNOWN	COMP	4	19	1.545134
chr19	18831938	18868236	18850087	ENSG00000005007.12	+	protein_coding	KNOWN	UPF1	13	24	1.379590
chr19	18868545	18896096	18882320	ENSG00000130283.8	-	protein_coding	KNOWN	GDF1	1	8	1.557691
chr19	18868545	18896727	18882636	ENSG00000223802.7	-	protein_coding	KNOWN	CERS1	5	8	1.546786
chr19	18881680	18883376	18882528	ENSG00000269694.1	+	antisense	KNOWN	AC005197.2	1	2	1.712287
chr19	18899514	18919397	18909455	ENSG00000105669.12	-	protein_coding	KNOWN	COPE	12	13	1.162930
chr19	18907013	18934397	18920705	ENSG00000268193.5	-	protein_coding	KNOWN	AC002985.3	2	7	1.221278
chr19	18919675	18928633	18924154	ENSG00000105671.11	+	protein_coding	KNOWN	DDX49	14	14	1.265919
chr19	18929201	18941261	18935231	ENSG00000051128.18	-	protein_coding	KNOWN	HOMER3	12	10	1.130179
chr19	18940322	18946831	18943576	ENSG00000269019.1	+	antisense	KNOWN	AC005932.1	1	3	1.120561
chr19	18957957	18958258	18958107	ENSG00000241172.3	-	misc_RNA	KNOWN	RN7SL70P	1	1	1.274195
chr19	18990888	19034023	19012455	ENSG00000064607.16	-	protein_coding	KNOWN	SUGP2	15	13	1.098207
chr19	19033575	19060311	19046943	ENSG00000105676.13	+	protein_coding	KNOWN	ARMC6	20	9	0.978140
chr19	19063999	19112888	19088443	ENSG00000181035.13	+	protein_coding	KNOWN	SLC25A42	6	8	0.987506
chr19	19119169	19138513	19128841	ENSG00000064545.14	-	protein_coding	KNOWN	TMEM161A	15	12	1.083257
chr19	19145567	19192158	19168862	ENSG00000064489.22	-	protein_coding	KNOWN	BORCS8-MEF2B	8	13	1.203968
chr19	19145568	19170289	19157928	ENSG00000213999.15	-	protein_coding	KNOWN	MEF2B	4	9	1.144295
chr19	19176903	19192591	19184747	ENSG00000254901.7	-	protein_coding	KNOWN	BORCS8	9	6	1.274267
chr19	19192229	19201869	19197049	ENSG00000064490.13	+	protein_coding	KNOWN	RFXANK	15	10	1.309897
chr19	19201416	19203424	19202420	ENSG00000184162.14	-	protein_coding	KNOWN	NR2C2AP	7	6	1.309897
chr19	19211973	19252233	19232103	ENSG00000130287.13	+	protein_coding	KNOWN	NCAN	4	15	1.055365
chr19	19232855	19232947	19232901	ENSG00000252973.1	+	snRNA	KNOWN	RNU6-1028P	1	1	1.002050
chr19	19254748	19273369	19264058	ENSG00000267629.3	-	processed_transcript	KNOWN	AC138430.4	1	12	0.879155
chr19	19255638	19256141	19255889	ENSG00000280282.1	+	TEC	KNOWN	LLNLR-259H9.1	1	1	0.823796
chr19	19255641	19262796	19259218	ENSG00000187664.8	-	protein_coding	KNOWN	HAPLN4	2	5	0.823796
chr19	19264364	19273391	19268877	ENSG00000213996.12	-	protein_coding	KNOWN	TM6SF2	5	10	0.938737
chr19	19276018	19320844	19298431	ENSG00000105705.15	-	protein_coding	KNOWN	SUGP1	15	14	1.019341
chr19	19320681	19358755	19339718	ENSG00000129933.20	+	protein_coding	KNOWN	MAU2	16	19	1.194204
chr19	19385826	19508931	19447378	ENSG00000167491.17	+	protein_coding	KNOWN	GATAD2A	13	14	1.010886
chr19	19401979	19402603	19402291	ENSG00000267234.1	-	antisense	KNOWN	CTB-184G21.3	1	2	1.000743
chr19	19435063	19435158	19435110	ENSG00000207821.1	+	miRNA	KNOWN	MIR640	1	1	0.950572
chr19	19512418	19515685	19514051	ENSG00000178093.13	-	protein_coding	KNOWN	TSSK6	3	2	1.119299
chr19	19515736	19529054	19522395	ENSG00000186010.18	+	protein_coding	KNOWN	NDUFA13	7	5	1.119299
chr19	19516227	19536076	19526151	ENSG00000258674.5	+	protein_coding	KNOWN	CTC-260F20.3	2	8	1.128660
chr19	19528861	19537581	19533221	ENSG00000250067.11	+	protein_coding	KNOWN	YJEFN3	3	7	1.145883
chr19	19538248	19546659	19542453	ENSG00000160161.9	+	protein_coding	KNOWN	CILP2	3	8	1.149873
chr19	19561707	19618916	19590311	ENSG00000105717.13	-	protein_coding	KNOWN	PBX4	5	8	0.838437
chr19	19588091	19588415	19588253	ENSG00000267178.3	-	processed_pseudogene	KNOWN	PHF5CP	1	1	0.582978
chr19	19606350	19608660	19607505	ENSG00000259242.2	+	antisense	KNOWN	AC002306.1	1	2	0.907567
chr19	19623668	19628930	19626299	ENSG00000064547.13	-	protein_coding	KNOWN	LPAR2	9	6	0.668591
chr19	19629476	19643667	19636571	ENSG00000089639.10	-	protein_coding	KNOWN	GMIP	8	21	1.329728
chr19	19645198	19663693	19654445	ENSG00000105726.16	-	protein_coding	KNOWN	ATP13A1	15	26	1.103645
chr19	19668796	19683509	19676152	ENSG00000181896.11	+	protein_coding	KNOWN	ZNF101	8	5	0.759678
chr19	19699203	19699409	19699306	ENSG00000271283.1	-	processed_pseudogene	KNOWN	CTC-412M14.6	1	1	0.185101
chr19	19708965	19710465	19709715	ENSG00000270402.1	+	processed_pseudogene	KNOWN	CTC-412M14.5	1	2	0.191300
chr19	19710471	19733097	19721784	ENSG00000105708.8	-	protein_coding	KNOWN	ZNF14	1	4	0.281500
chr19	19740884	19750127	19745505	ENSG00000275540.1	+	unprocessed_pseudogene	KNOWN	CTC-559E9.12	1	13	0.767059
chr19	19750618	19752544	19751581	ENSG00000271499.1	+	processed_pseudogene	KNOWN	CTC-559E9.9	1	1	1.029835
chr19	19757366	19776423	19766894	ENSG00000266904.5	-	lincRNA	KNOWN	CTC-559E9.1	7	4	0.810535
chr19	19761038	19821716	19791377	ENSG00000267581.1	-	lincRNA	KNOWN	CTC-559E9.4	1	3	0.493103
chr19	19768731	19768989	19768860	ENSG00000267693.1	+	processed_pseudogene	KNOWN	CTC-559E9.2	1	1	1.029835
chr19	19776602	19836073	19806337	ENSG00000267419.2	+	transcribed_unprocessed_pseudogene	KNOWN	CTC-559E9.6	4	5	0.364307
chr19	19785839	19821751	19803795	ENSG00000081665.13	-	protein_coding	KNOWN	ZNF506	12	6	0.409075
chr19	19788755	19790531	19789643	ENSG00000267481.1	-	sense_intronic	KNOWN	CTC-559E9.5	1	2	0.430559
chr19	19856975	19857527	19857251	ENSG00000270325.1	+	processed_pseudogene	KNOWN	BNIP3P9	1	1	-0.272772
chr19	19865886	19894674	19880280	ENSG00000256771.2	+	protein_coding	KNOWN	ZNF253	4	4	0.171626
chr19	19870723	19871299	19871011	ENSG00000270270.1	-	processed_pseudogene	KNOWN	BNIP3P10	1	1	0.262833
chr19	19891159	19891241	19891200	ENSG00000265339.1	+	miRNA	NOVEL	AC011477.1	1	1	0.172410
chr19	19892433	19895847	19894140	ENSG00000267565.1	-	antisense	KNOWN	CTC-559E9.8	1	2	0.172410
chr19	19900913	19935575	19918244	ENSG00000184635.13	+	protein_coding	KNOWN	ZNF93	7	5	0.299644
chr19	19900968	19963464	19932216	ENSG00000267268.1	+	lincRNA	KNOWN	AC007204.2	1	4	0.258423
chr19	19908268	19909146	19908707	ENSG00000273791.1	-	unprocessed_pseudogene	KNOWN	CTC-559E9.13	1	2	0.172410
chr19	19978190	19979610	19978900	ENSG00000274800.1	-	unprocessed_pseudogene	KNOWN	AC007204.3	1	3	0.026104
chr19	19997058	20039506	20018282	ENSG00000197124.11	-	protein_coding	KNOWN	ZNF682	13	6	0.159291
chr19	20027027	20027117	20027072	ENSG00000264441.1	-	miRNA	NOVEL	AC006539.1	1	1	-0.067486
chr19	20033444	20034332	20033888	ENSG00000268070.1	+	processed_pseudogene	KNOWN	AC006539.3	1	2	0.459501
chr19	20056466	20056594	20056530	ENSG00000274033.1	-	unprocessed_pseudogene	KNOWN	AC006539.6	1	1	0.362294
chr19	20062755	20063320	20063037	ENSG00000269154.1	+	processed_pseudogene	KNOWN	BNIP3P13	1	1	0.362294
chr19	20077994	20127076	20102535	ENSG00000213988.9	+	protein_coding	KNOWN	ZNF90	7	6	0.074021
chr19	20079818	20080539	20080178	ENSG00000240673.1	-	processed_pseudogene	KNOWN	AC006539.2	1	2	0.279415
chr19	20087013	20087576	20087294	ENSG00000274612.1	-	processed_pseudogene	KNOWN	CTC-260E6.12	1	1	0.279415
chr19	20125044	20125484	20125264	ENSG00000224864.4	+	transcribed_processed_pseudogene	KNOWN	CTC-260E6.2	1	1	-0.155530
chr19	20125377	20321305	20223341	ENSG00000267383.6	-	antisense	KNOWN	CTC-260E6.6	6	5	0.097063
chr19	20131894	20151908	20141901	ENSG00000267220.1	-	transcribed_unprocessed_pseudogene	KNOWN	CTC-260E6.9	1	3	-0.056651
chr19	20136933	20137233	20137083	ENSG00000270716.1	+	processed_pseudogene	KNOWN	BNIP3P15	1	1	-0.086978
chr19	20167228	20200490	20183859	ENSG00000256229.7	+	protein_coding	KNOWN	ZNF486	2	4	0.289931
chr19	20175013	20177063	20176038	ENSG00000267641.1	-	processed_pseudogene	KNOWN	BNIP3P16	1	2	0.426109
chr19	20206844	20206954	20206899	ENSG00000267771.1	-	unprocessed_pseudogene	KNOWN	CTC-260E6.7	1	1	0.045895
chr19	20207192	20209789	20208490	ENSG00000279039.1	-	TEC	KNOWN	CTC-260E6.3	1	1	0.045895
chr19	20220597	20222186	20221391	ENSG00000280079.1	-	TEC	KNOWN	CTC-260E6.4	1	1	0.179455
chr19	20221869	20222463	20222166	ENSG00000271524.1	+	processed_pseudogene	KNOWN	BNIP3P17	1	1	0.179455
chr19	20249052	20250295	20249673	ENSG00000268620.1	+	unprocessed_pseudogene	KNOWN	AC078899.4	1	2	0.307936
chr19	20257720	20259418	20258569	ENSG00000213985.4	+	processed_pseudogene	KNOWN	AC078899.1	1	2	0.225515
chr19	20267817	20268391	20268104	ENSG00000269055.1	+	processed_pseudogene	KNOWN	BNIP3P18	1	1	0.225515
chr19	20295089	20303794	20299441	ENSG00000269274.1	+	unprocessed_pseudogene	KNOWN	AC078899.3	1	3	-0.241432
chr19	20302590	20302672	20302631	ENSG00000266609.1	+	miRNA	NOVEL	AC078899.2	1	1	-0.241432
chr19	20323992	20324568	20324280	ENSG00000271638.1	-	processed_pseudogene	KNOWN	BNIP3P19	1	1	-0.188686
chr19	20330121	20331517	20330819	ENSG00000276294.1	+	unprocessed_pseudogene	KNOWN	CTC-575C13.3	1	2	-0.150579
chr19	20340269	20424969	20382619	ENSG00000231205.11	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF826P	7	4	-0.039672
chr19	20351502	20352079	20351790	ENSG00000271704.1	+	processed_pseudogene	KNOWN	BNIP3P20	1	1	0.004529
chr19	20389658	20390689	20390173	ENSG00000268461.2	+	unprocessed_pseudogene	KNOWN	CTC-575C13.4	1	2	-0.137999
chr19	20399272	20399354	20399313	ENSG00000238517.1	-	miRNA	KNOWN	MIR1270	1	1	-0.251661
chr19	20416514	20417069	20416791	ENSG00000268174.1	+	processed_pseudogene	KNOWN	BNIP3P22	1	1	0.080676
chr19	20432552	20528615	20480583	ENSG00000269043.1	+	lincRNA	KNOWN	CTC-513N18.6	1	4	-0.182056
chr19	20443215	20443725	20443470	ENSG00000268335.1	-	processed_pseudogene	KNOWN	BNIP3P23	1	1	-0.158816
chr19	20535825	20565809	20550817	ENSG00000237440.8	-	protein_coding	KNOWN	ZNF737	5	5	-0.020414
chr19	20553792	20661583	20607687	ENSG00000269110.1	-	lincRNA	KNOWN	CTC-513N18.7	1	5	-0.057924
chr19	20583084	20583647	20583365	ENSG00000268272.1	-	unprocessed_pseudogene	KNOWN	VN1R78P	1	1	-0.038856
chr19	20611559	20615389	20613474	ENSG00000268560.1	+	lincRNA	KNOWN	CTD-2332E11.2	1	2	0.036649
chr19	20620061	20661596	20640828	ENSG00000188171.15	-	protein_coding	KNOWN	ZNF626	4	5	-0.030628
chr19	20674923	20696533	20685728	ENSG00000280171.1	+	unprocessed_pseudogene	KNOWN	CTD-2542C24.14	1	4	-0.094945
chr19	20691336	20697615	20694475	ENSG00000269779.1	+	unprocessed_pseudogene	KNOWN	CTD-2542C24.2	1	2	-0.242798
chr19	20746923	20755250	20751086	ENSG00000268416.1	-	lincRNA	KNOWN	CTD-2626G11.2	1	1	-0.032319
chr19	20758440	20758952	20758696	ENSG00000269885.1	+	unprocessed_pseudogene	KNOWN	VN1R79P	1	1	0.009099
chr19	20776304	20807322	20791813	ENSG00000160229.11	+	protein_coding	KNOWN	ZNF66	3	4	0.131517
chr19	20784596	20785152	20784874	ENSG00000269040.1	-	processed_pseudogene	KNOWN	BNIP3P24	1	1	0.091992
chr19	20805511	20805594	20805552	ENSG00000266156.1	+	miRNA	NOVEL	AC010329.1	1	1	0.162765
chr19	20838515	20847417	20842966	ENSG00000269373.1	-	unprocessed_pseudogene	KNOWN	CTD-2542C24.3	1	3	-0.237316
chr19	20923222	20950697	20936959	ENSG00000105750.14	+	protein_coding	KNOWN	ZNF85	14	5	0.262462
chr19	20926777	20928714	20927745	ENSG00000279404.1	-	TEC	KNOWN	CTD-2542C24.5	1	1	0.200698
chr19	20961057	20965140	20963098	ENSG00000269012.2	+	unprocessed_pseudogene	KNOWN	KRT18P40	1	3	-0.403966
chr19	20972262	20983210	20977736	ENSG00000268326.1	+	lincRNA	KNOWN	CTD-2542C24.8	1	2	0.059751
chr19	21020620	21060050	21040335	ENSG00000118620.12	+	protein_coding	KNOWN	ZNF430	6	5	0.219196
chr19	21025915	21026041	21025978	ENSG00000271598.1	-	processed_pseudogene	KNOWN	CTD-2542C24.9	1	1	0.465145
chr19	21056003	21056080	21056041	ENSG00000265650.1	+	miRNA	NOVEL	AC012627.1	1	1	-0.005705
chr19	21063924	21064261	21064092	ENSG00000268598.1	+	unprocessed_pseudogene	KNOWN	VN1R80P	1	1	-0.005705
chr19	21082159	21125270	21103714	ENSG00000160352.15	+	protein_coding	KNOWN	ZNF714	10	7	0.157455
chr19	21113128	21113236	21113182	ENSG00000201035.1	-	rRNA	KNOWN	RNA5SP469	1	1	0.067608
chr19	21123817	21124188	21124002	ENSG00000268357.1	+	unprocessed_pseudogene	KNOWN	VN1R81P	1	1	0.067608
chr19	21142024	21196053	21169038	ENSG00000196705.8	+	protein_coding	KNOWN	ZNF431	7	6	0.318315
chr19	21149648	21150438	21150043	ENSG00000240522.1	-	processed_pseudogene	KNOWN	RPL7AP10	1	1	0.273142
chr19	21188598	21188953	21188775	ENSG00000268995.1	+	unprocessed_pseudogene	KNOWN	VN1R82P	1	1	0.425822
chr19	21221500	21329425	21275462	ENSG00000182141.9	-	protein_coding	KNOWN	ZNF708	5	16	0.246597
chr19	21221645	21222746	21222195	ENSG00000268892.1	-	unprocessed_pseudogene	KNOWN	CTD-3233P19.8	1	1	0.371609
chr19	21225098	21245241	21235169	ENSG00000269839.1	-	unprocessed_pseudogene	KNOWN	CTD-3233P19.7	1	3	0.172022
chr19	21233335	21233652	21233493	ENSG00000242291.1	+	processed_pseudogene	KNOWN	RPL36AP51	1	1	0.107846
chr19	21276023	21276332	21276177	ENSG00000268747.1	-	processed_pseudogene	KNOWN	CTD-3030D20.1	1	1	0.429433
chr19	21289554	21289998	21289776	ENSG00000268521.1	-	unprocessed_pseudogene	KNOWN	VN1R83P	1	1	0.429433
chr19	21318161	21318719	21318440	ENSG00000268322.1	+	processed_pseudogene	KNOWN	BNIP3P25	1	1	0.211573
chr19	21358930	21379302	21369116	ENSG00000172687.13	+	protein_coding	KNOWN	ZNF738	5	5	0.171807
chr19	21381220	21381921	21381570	ENSG00000268731.1	-	processed_pseudogene	KNOWN	CTD-2561J22.1	1	2	0.110139
chr19	21382865	21387177	21385021	ENSG00000213976.4	+	unprocessed_pseudogene	KNOWN	CTD-2561J22.2	1	3	0.110139
chr19	21397119	21427573	21412346	ENSG00000196268.11	+	protein_coding	KNOWN	ZNF493	9	5	0.015784
chr19	21405159	21491266	21448212	ENSG00000269237.1	+	protein_coding	KNOWN	CTD-2561J22.3	1	5	0.015229
chr19	21444241	21463908	21454074	ENSG00000268119.5	-	processed_transcript	KNOWN	CTD-2561J22.5	6	5	0.022263
chr19	21483374	21503238	21493306	ENSG00000268658.5	+	lincRNA	KNOWN	LINC00664	3	14	0.364512
chr19	21496682	21556270	21526476	ENSG00000197013.9	+	protein_coding	KNOWN	ZNF429	9	11	0.174253
chr19	21521343	21521896	21521619	ENSG00000268705.1	-	processed_pseudogene	KNOWN	BNIP3P26	1	1	0.322422
chr19	21554640	21569237	21561938	ENSG00000268081.1	-	antisense	KNOWN	RP11-678G14.2	1	2	0.091992
chr19	21570822	21587322	21579072	ENSG00000268555.1	-	lincRNA	KNOWN	RP11-678G14.3	1	2	0.177568
chr19	21587432	21594628	21591030	ENSG00000268240.1	-	lincRNA	KNOWN	RP11-678G14.4	2	2	0.096252
chr19	21592727	21593041	21592884	ENSG00000274503.1	+	unprocessed_pseudogene	KNOWN	RP11-678G14.6	1	1	0.051158
chr19	21634833	21635175	21635004	ENSG00000271182.1	-	processed_pseudogene	KNOWN	RP11-678G14.5	1	1	0.204886
chr19	21637974	21656300	21647137	ENSG00000268278.1	+	unprocessed_pseudogene	KNOWN	RP11-420K14.1	1	3	-0.076075
chr19	21677550	21678221	21677885	ENSG00000268433.1	-	processed_pseudogene	KNOWN	RP11-420K14.2	1	1	-0.143753
chr19	21709522	21710191	21709856	ENSG00000268535.1	+	processed_pseudogene	KNOWN	RP11-420K14.3	1	1	0.179044
chr19	21719801	21720035	21719918	ENSG00000268117.1	-	unprocessed_pseudogene	KNOWN	VN1R84P	1	1	-0.030865
chr19	21722766	21767628	21745197	ENSG00000197020.10	-	protein_coding	KNOWN	ZNF100	6	8	-0.014199
chr19	21750747	21753438	21752092	ENSG00000269845.1	+	transcribed_processed_pseudogene	KNOWN	RP11-420K14.6	2	1	0.069853
chr19	21753011	21753083	21753047	ENSG00000265084.1	+	miRNA	NOVEL	AC092364.1	1	1	0.069853
chr19	21768772	21793860	21781316	ENSG00000268184.1	-	lincRNA	KNOWN	RP11-420K14.8	2	2	0.075066
chr19	21800480	21801266	21800873	ENSG00000269136.1	+	processed_pseudogene	KNOWN	BRI3BPP1	1	1	0.368053
chr19	21804949	21852125	21828537	ENSG00000198521.11	-	protein_coding	KNOWN	ZNF43	12	7	0.078509
chr19	21826513	21827279	21826896	ENSG00000268438.1	+	processed_pseudogene	KNOWN	BNIP3P27	1	2	-0.242427
chr19	21932958	22010949	21971953	ENSG00000160321.14	-	protein_coding	KNOWN	ZNF208	7	7	-0.254941
chr19	21940820	21941533	21941176	ENSG00000269615.1	+	processed_pseudogene	KNOWN	AC003973.1	1	1	0.008223
chr19	21965708	21968529	21967118	ENSG00000279377.1	-	TEC	KNOWN	AC003973.3	1	1	-0.316351
chr19	21997648	21998840	21998244	ENSG00000271095.1	+	processed_pseudogene	KNOWN	BNIP3P28	1	1	-0.098339
chr19	22017959	22036315	22027137	ENSG00000269504.1	-	lincRNA	KNOWN	AC003973.4	1	9	0.056868
chr19	22043500	22050005	22046752	ENSG00000269199.1	-	lincRNA	KNOWN	AC003973.5	1	4	0.251980
chr19	22052452	22091480	22071966	ENSG00000197134.11	+	protein_coding	KNOWN	ZNF257	7	5	-0.084943
chr19	22065828	22066398	22066113	ENSG00000269742.1	-	processed_pseudogene	KNOWN	BNIP3P29	1	1	0.195614
chr19	22128627	22130318	22129472	ENSG00000269505.2	-	processed_pseudogene	KNOWN	ZNF92P2	1	3	0.138762
chr19	22130325	22130489	22130407	ENSG00000268116.1	+	processed_pseudogene	KNOWN	RP11-157B13.1	1	1	-0.016785
chr19	22137931	22138981	22138456	ENSG00000268140.1	+	processed_pseudogene	KNOWN	PCGF7P	1	1	-0.016785
chr19	22140532	22141117	22140824	ENSG00000269575.1	+	processed_pseudogene	KNOWN	RP11-157B13.3	1	1	-0.016785
chr19	22174766	22175191	22174978	ENSG00000269345.1	-	unprocessed_pseudogene	KNOWN	VN1R85P	1	1	-0.485317
chr19	22179091	22196951	22188021	ENSG00000196109.6	-	protein_coding	KNOWN	ZNF676	1	3	-0.362297
chr19	22203128	22204003	22203565	ENSG00000268079.1	+	processed_pseudogene	KNOWN	BNIP3P30	1	2	-0.169274
chr19	22215634	22215661	22215647	ENSG00000282732.1	-	unprocessed_pseudogene	KNOWN	RP11-157B13.10	1	1	0.083909
chr19	22243254	22245347	22244300	ENSG00000267872.1	-	lincRNA	KNOWN	RP11-157B13.7	1	1	-0.215437
chr19	22259693	22261335	22260514	ENSG00000268597.1	+	lincRNA	KNOWN	RP11-157B13.8	1	2	0.220148
chr19	22286408	22317176	22301792	ENSG00000196350.8	+	protein_coding	KNOWN	ZNF729	1	4	-0.148130
chr19	22298977	22299868	22299422	ENSG00000270191.1	-	processed_pseudogene	KNOWN	BNIP3P31	1	2	-0.048016
chr19	22362589	22362825	22362707	ENSG00000268685.1	+	processed_pseudogene	KNOWN	CTB-31C7.3	1	1	0.225258
chr19	22368599	22368952	22368775	ENSG00000236312.3	-	processed_pseudogene	KNOWN	RPL34P34	1	1	0.225258
chr19	22391019	22532485	22461752	ENSG00000197360.9	-	protein_coding	KNOWN	ZNF98	5	4	-0.070131
chr19	22422513	22426045	22424279	ENSG00000269796.1	+	lincRNA	KNOWN	AC011516.1	1	2	-0.131730
chr19	22447934	22448777	22448355	ENSG00000268830.1	-	processed_pseudogene	KNOWN	BNIP3P32	1	2	0.068276
chr19	22455988	22456459	22456223	ENSG00000270947.1	+	lincRNA	KNOWN	AC025811.3	1	1	-0.116250
chr19	22457329	22458212	22457770	ENSG00000268717.1	-	processed_pseudogene	KNOWN	BNIP3P33	1	2	-0.116250
chr19	22463922	22473036	22468479	ENSG00000269138.1	+	unprocessed_pseudogene	KNOWN	ZNF209P	1	3	-0.195458
chr19	22501699	22501948	22501823	ENSG00000270317.1	-	processed_pseudogene	KNOWN	AC004004.2	1	1	-0.074980
chr19	22520995	22527949	22524472	ENSG00000260599.1	-	sense_intronic	KNOWN	CTC-457E21.1	1	5	0.313316
chr19	22532626	22533494	22533060	ENSG00000269364.1	+	lincRNA	KNOWN	LINC01233	3	3	0.057435
chr19	22555261	22555367	22555314	ENSG00000207397.1	+	snRNA	KNOWN	RNU6-1179P	1	1	0.206163
chr19	22595479	22596163	22595821	ENSG00000271149.1	-	unprocessed_pseudogene	KNOWN	CTC-457E21.10	1	3	0.030916
chr19	22596257	22603550	22599903	ENSG00000269332.5	+	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P9	3	14	0.030916
chr19	22601485	22601707	22601596	ENSG00000240713.3	+	misc_RNA	KNOWN	RN7SL860P	1	1	0.030916
chr19	22602706	22602788	22602747	ENSG00000221790.1	+	miRNA	NOVEL	AC011467.1	1	1	0.030916
chr19	22603269	22608501	22605885	ENSG00000268823.2	+	processed_transcript	KNOWN	CTC-457E21.6	1	4	0.030916
chr19	22605739	22608211	22606975	ENSG00000269025.2	+	transcribed_processed_pseudogene	KNOWN	CTC-457E21.5	2	2	0.030916
chr19	22609606	22610601	22610103	ENSG00000269316.1	+	processed_pseudogene	KNOWN	CTC-457E21.4	1	1	0.224222
chr19	22615557	22623971	22619764	ENSG00000268038.1	-	lincRNA	KNOWN	AC011516.2	1	2	0.350417
chr19	22620483	22620724	22620603	ENSG00000268589.1	+	unprocessed_pseudogene	KNOWN	CTC-457E21.7	1	1	0.350417
chr19	22634324	22667670	22650997	ENSG00000229676.2	+	protein_coding	KNOWN	ZNF492	1	4	0.055207
chr19	22665552	22716991	22691271	ENSG00000268981.5	-	antisense	KNOWN	CTC-457E21.9	2	4	-0.120833
chr19	22685167	22686732	22685949	ENSG00000198153.8	+	unprocessed_pseudogene	KNOWN	ZNF849P	1	1	-0.351310
chr19	22699352	22699685	22699518	ENSG00000241282.1	+	processed_pseudogene	KNOWN	RPL34P33	1	1	-0.050027
chr19	22708834	22709314	22709074	ENSG00000270475.1	-	processed_pseudogene	KNOWN	CTC-451A6.5	1	1	-0.050027
chr19	22742924	22743410	22743167	ENSG00000268789.1	-	unprocessed_pseudogene	KNOWN	VN1R87P	1	1	0.156762
chr19	22752183	22784107	22768145	ENSG00000213973.8	-	protein_coding	KNOWN	ZNF99	2	8	-0.142874
chr19	22770375	22770622	22770498	ENSG00000279966.2	+	unprocessed_pseudogene	KNOWN	CTB-159G17.4	1	1	0.013989
chr19	22770937	22771191	22771064	ENSG00000270518.2	+	unprocessed_pseudogene	KNOWN	CTB-159G17.3	1	1	0.013989
chr19	22773853	22774424	22774138	ENSG00000269509.1	+	processed_pseudogene	KNOWN	BNIP3P34	1	1	0.013989
chr19	22832201	22859422	22845811	ENSG00000268696.1	+	unprocessed_pseudogene	KNOWN	ZNF723P	1	5	-0.200749
chr19	22840432	22840921	22840676	ENSG00000271655.1	-	processed_pseudogene	KNOWN	BNIP3P35	1	1	-0.157237
chr19	22861303	22861594	22861448	ENSG00000268541.1	+	unprocessed_pseudogene	KNOWN	VN1R88P	1	1	-0.282935
chr19	22907086	22914289	22910687	ENSG00000268296.1	-	lincRNA	KNOWN	CTD-2579N5.3	1	3	-0.220012
chr19	22925377	22925547	22925462	ENSG00000269458.1	+	unprocessed_pseudogene	KNOWN	CTD-2579N5.4	1	1	-0.300326
chr19	22975468	23003176	22989322	ENSG00000269067.1	-	protein_coding	KNOWN	ZNF728	2	4	-0.239019
chr19	22994968	22995847	22995407	ENSG00000271661.1	+	processed_pseudogene	KNOWN	BNIP3P36	1	2	-0.130401
chr19	23015075	23023697	23019386	ENSG00000261558.1	-	lincRNA	KNOWN	CTD-2291D10.2	1	4	0.204886
chr19	23046958	23061752	23054355	ENSG00000261615.6	-	lincRNA	KNOWN	CTD-2291D10.1	2	8	0.319078
chr19	23068473	23071476	23069974	ENSG00000269543.5	-	lincRNA	KNOWN	CTD-2291D10.3	2	4	0.380400
chr19	23075201	23100361	23087781	ENSG00000267886.1	+	lincRNA	KNOWN	CTD-2291D10.4	2	4	0.390020
chr19	23075210	23147219	23111214	ENSG00000183850.13	+	protein_coding	KNOWN	ZNF730	3	4	0.201634
chr19	23123188	23124088	23123638	ENSG00000270479.1	-	processed_pseudogene	KNOWN	BNIP3P37	1	1	0.199520
chr19	23125665	23128543	23127104	ENSG00000268105.1	+	processed_pseudogene	KNOWN	RP11-369G6.2	1	2	0.199520
chr19	23126569	23127792	23127180	ENSG00000267920.1	-	processed_pseudogene	KNOWN	SNX6P1	1	1	0.199520
chr19	23204010	23204556	23204283	ENSG00000269471.1	+	processed_pseudogene	KNOWN	RP11-15H20.2	1	1	0.021602
chr19	23221599	23250390	23235994	ENSG00000196081.9	-	protein_coding	KNOWN	ZNF724P	3	5	0.196342
chr19	23236308	23236851	23236579	ENSG00000268469.1	+	processed_pseudogene	KNOWN	BNIP3P38	1	1	0.232169
chr19	23255053	23257939	23256496	ENSG00000269837.1	-	transcribed_processed_pseudogene	KNOWN	IPO5P1	2	1	0.605570
chr19	23257255	23274232	23265743	ENSG00000269107.1	-	lincRNA	KNOWN	RP11-15H20.7	1	3	0.549083
chr19	23259906	23274251	23267078	ENSG00000213971.7	-	processed_transcript	KNOWN	RP11-15H20.6	11	5	0.538419
chr19	23288620	23289345	23288982	ENSG00000268794.1	+	unprocessed_pseudogene	KNOWN	VN1R90P	1	1	0.379022
chr19	23290849	23291017	23290933	ENSG00000268148.1	+	unprocessed_pseudogene	KNOWN	VN1R91P	1	1	-0.002957
chr19	23304991	23395560	23350275	ENSG00000167232.13	-	protein_coding	KNOWN	ZNF91	12	4	0.089073
chr19	23323968	23329101	23326534	ENSG00000267934.1	+	antisense	KNOWN	CTB-176F20.3	1	1	0.132826
chr19	23380317	23380876	23380596	ENSG00000269431.1	+	processed_pseudogene	KNOWN	BNIP3P8	1	1	0.109586
chr19	23384530	23385293	23384911	ENSG00000268992.1	+	processed_pseudogene	KNOWN	CDC42EP3P1	1	1	0.109586
chr19	23399233	23416075	23407654	ENSG00000269416.5	-	lincRNA	KNOWN	LINC01224	9	8	0.347607
chr19	23444262	23445189	23444725	ENSG00000268908.1	+	unprocessed_pseudogene	KNOWN	VN1R92P	1	1	0.282675
chr19	23479762	23480468	23480115	ENSG00000275201.1	-	unprocessed_pseudogene	KNOWN	LLNLF-18A12.1	1	2	0.436208
chr19	23492428	23512656	23502542	ENSG00000268100.1	-	unprocessed_pseudogene	KNOWN	ZNF725P	1	4	-0.004012
chr19	23525631	23687220	23606425	ENSG00000197372.9	-	protein_coding	KNOWN	ZNF675	9	5	0.226352
chr19	23596122	23598159	23597140	ENSG00000268455.1	+	unprocessed_pseudogene	KNOWN	RP11-359H18.2	1	2	0.149873
chr19	23597341	23597592	23597466	ENSG00000240231.1	+	processed_pseudogene	KNOWN	RPS27P29	1	1	0.149873
chr19	23602567	23603106	23602836	ENSG00000269320.1	+	unprocessed_pseudogene	KNOWN	VN1R93P	1	1	0.149873
chr19	23739195	23758891	23749043	ENSG00000196172.9	-	protein_coding	KNOWN	ZNF681	3	4	-0.124139
chr19	23762944	23833314	23798129	ENSG00000233836.7	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-255H23.2	4	4	0.155672
chr19	23798924	23799477	23799200	ENSG00000269662.1	-	processed_pseudogene	KNOWN	BNIP3P39	1	1	0.255491
chr19	23817599	23874701	23846150	ENSG00000267924.1	-	lincRNA	KNOWN	RP11-255H23.4	1	4	-0.008466
chr19	23827162	23828049	23827605	ENSG00000225178.5	+	processed_pseudogene	KNOWN	RPSAP58	1	1	-0.129035
chr19	23842549	23843230	23842889	ENSG00000277493.1	+	unprocessed_pseudogene	KNOWN	RP11-255H23.5	1	2	-0.020274
chr19	23914876	23945159	23930017	ENSG00000213967.10	+	protein_coding	KNOWN	ZNF726	6	7	0.054739
chr19	23919081	23957930	23938505	ENSG00000269289.5	-	antisense	KNOWN	CTB-92J24.3	2	3	0.032065
chr19	23927788	23929287	23928537	ENSG00000269397.1	+	sense_intronic	KNOWN	CTB-92J24.2	1	1	0.044943
chr19	23935220	23936173	23935696	ENSG00000269421.1	+	unprocessed_pseudogene	KNOWN	ZNF92P3	1	1	0.064511
chr19	24004358	24004507	24004432	ENSG00000201966.1	-	rRNA	KNOWN	RNA5-8SP4	1	1	0.043551
chr19	24033405	24129961	24081683	ENSG00000213096.9	+	protein_coding	KNOWN	ZNF254	9	6	0.317705
chr19	24033445	24066909	24050177	ENSG00000268362.5	+	lincRNA	KNOWN	CTD-2017D11.1	2	7	0.459226
chr19	24078481	24080669	24079575	ENSG00000279425.1	+	TEC	KNOWN	CTD-2017D11.2	1	1	0.408727
chr19	24098425	24098980	24098702	ENSG00000268058.1	-	processed_pseudogene	KNOWN	BNIP3P40	1	1	0.303911
chr19	24146701	24147081	24146891	ENSG00000276030.1	+	lincRNA	KNOWN	CTD-2027I19.3	1	1	-0.003933
chr19	24162370	24163425	24162897	ENSG00000268442.1	-	processed_pseudogene	KNOWN	CTD-2027I19.2	1	1	0.001018
chr19	27638483	27646483	27642483	ENSG00000267696.6	-	lincRNA	KNOWN	ERVK-28	3	2	-0.225198
chr19	27639300	27639665	27639482	ENSG00000279882.1	-	TEC	KNOWN	CTB-151G24.2	1	1	-0.225198
chr19	27684580	27793940	27739260	ENSG00000261824.6	-	lincRNA	KNOWN	LINC00662	9	4	0.212490
chr19	27757184	27760849	27759016	ENSG00000261770.1	-	lincRNA	KNOWN	CTC-459F4.1	1	1	0.356369
chr19	27793463	27918863	27856163	ENSG00000267575.6	+	lincRNA	KNOWN	CTC-459F4.3	12	4	0.066281
chr19	27793488	27984984	27889236	ENSG00000272635.1	+	processed_transcript	KNOWN	LLNLF-65H9.1	1	6	0.023550
chr19	27802838	27803472	27803155	ENSG00000281468.1	+	sense_intronic	KNOWN	CTC-459F4.9	1	1	0.100166
chr19	27803538	27804060	27803799	ENSG00000267264.1	+	processed_pseudogene	KNOWN	CTC-459F4.6	1	1	0.100166
chr19	27805423	27806205	27805814	ENSG00000267323.1	-	processed_pseudogene	KNOWN	SLC25A1P5	1	1	0.100166
chr19	27849730	27889222	27869476	ENSG00000266977.1	-	lincRNA	KNOWN	CTC-459F4.5	1	2	0.048897
chr19	27892495	27898927	27895711	ENSG00000267389.2	-	unprocessed_pseudogene	KNOWN	CTC-459F4.7	1	8	0.308310
chr19	27902595	27984743	27943669	ENSG00000267623.3	+	transcribed_unprocessed_pseudogene	KNOWN	AC022153.1	2	10	0.033585
chr19	27908356	27908554	27908455	ENSG00000267768.1	-	processed_pseudogene	KNOWN	CTC-459F4.8	1	1	0.308310
chr19	27918943	27929370	27924156	ENSG00000267630.1	+	transcribed_unprocessed_pseudogene	KNOWN	AC005758.1	1	5	0.476851
chr19	27983032	27983332	27983182	ENSG00000266906.1	-	processed_pseudogene	KNOWN	AC005357.1	1	1	-0.202456
chr19	28065267	28125430	28095348	ENSG00000267509.5	+	lincRNA	KNOWN	CTD-2043I16.1	2	4	-0.040110
chr19	28294093	28313500	28303796	ENSG00000266928.1	-	lincRNA	KNOWN	CTB-70G10.1	1	3	0.227089
chr19	28316705	28386204	28351454	ENSG00000267320.5	-	lincRNA	KNOWN	AC005780.1	3	6	-0.048961
chr19	28394851	28396428	28395639	ENSG00000267238.1	-	lincRNA	KNOWN	AC093074.1	1	2	0.223903
chr19	28418483	28429490	28423986	ENSG00000260725.1	-	lincRNA	KNOWN	AC005307.1	1	2	0.028566
chr19	28435388	28727777	28581582	ENSG00000267243.5	-	lincRNA	KNOWN	AC005307.3	7	10	0.038766
chr19	28491864	28632728	28562296	ENSG00000266893.1	-	lincRNA	KNOWN	AC005616.1	1	2	0.080077
chr19	28509238	28518728	28513983	ENSG00000267423.1	+	lincRNA	KNOWN	AC005616.2	1	2	0.107033
chr19	28602379	28648303	28625341	ENSG00000267537.1	-	lincRNA	KNOWN	AC005394.1	1	2	0.043725
chr19	28606688	28615229	28610958	ENSG00000266976.1	+	lincRNA	KNOWN	AC079466.1	1	4	0.047507
chr19	28790812	28792871	28791841	ENSG00000267799.1	-	processed_pseudogene	KNOWN	MAN1A2P1	1	2	-0.180629
chr19	28869796	28879170	28874483	ENSG00000267617.1	+	lincRNA	KNOWN	AC007795.1	1	3	0.014271
chr19	28883430	28953245	28918337	ENSG00000267528.1	+	lincRNA	KNOWN	AC011524.1	1	3	0.415243
chr19	28892931	28895949	28894440	ENSG00000267683.1	+	lincRNA	KNOWN	AC008991.1	1	2	0.443253
chr19	28949437	28950200	28949818	ENSG00000267027.1	-	lincRNA	KNOWN	AC011524.2	1	2	0.495398
chr19	28960506	28964943	28962724	ENSG00000267240.1	-	lincRNA	KNOWN	AC011524.3	1	3	0.596861
chr19	28965131	28970874	28968002	ENSG00000267339.5	+	lincRNA	KNOWN	LINC00906	6	4	0.512594
chr19	29001670	29001775	29001722	ENSG00000252272.1	+	rRNA	KNOWN	RNA5SP470	1	1	0.445629
chr19	29002555	29013955	29008255	ENSG00000267014.5	+	lincRNA	KNOWN	LINC01532	3	5	0.481841
chr19	29205321	29213541	29209431	ENSG00000169021.5	-	protein_coding	KNOWN	UQCRFS1	1	2	0.177626
chr19	29213235	29215815	29214525	ENSG00000267498.1	+	lincRNA	KNOWN	CTB-32O4.2	2	3	0.222494
chr19	29220864	29221666	29221265	ENSG00000276251.1	+	lincRNA	KNOWN	CTB-32O4.3	1	1	0.222494
chr19	29222542	29223137	29222839	ENSG00000276631.1	+	lincRNA	KNOWN	CTB-32O4.4	1	1	0.222494
chr19	29233090	29233385	29233237	ENSG00000241604.3	-	misc_RNA	KNOWN	RN7SL340P	1	1	0.373086
chr19	29287011	29525752	29406381	ENSG00000264515.5	-	processed_transcript	KNOWN	CTC-525D6.1	2	10	0.194869
chr19	29448038	29448380	29448209	ENSG00000267574.1	+	lincRNA	KNOWN	CTC-525D6.5	1	2	0.571682
chr19	29489775	29526948	29508361	ENSG00000266248.1	-	antisense	KNOWN	CTC-525D6.2	1	2	0.364958
chr19	29506966	29509041	29508003	ENSG00000279387.1	-	TEC	KNOWN	CTC-525D6.3	1	1	0.229495
chr19	29526499	29564479	29545489	ENSG00000187135.7	+	protein_coding	KNOWN	VSTM2B	1	5	0.457962
chr19	29604017	29617237	29610627	ENSG00000105171.9	+	protein_coding	KNOWN	POP4	13	7	0.120920
chr19	29665056	29675457	29670256	ENSG00000166289.5	+	protein_coding	KNOWN	PLEKHF1	4	2	0.754540
chr19	29698886	29715789	29707337	ENSG00000131943.17	-	protein_coding	KNOWN	C19orf12	9	4	0.814915
chr19	29811898	29824308	29818103	ENSG00000105173.13	+	protein_coding	KNOWN	CCNE1	7	12	0.419286
chr19	29846709	29846801	29846755	ENSG00000274103.1	+	miRNA	NOVEL	AC008798.1	1	1	0.446341
chr19	29901696	29901869	29901782	ENSG00000267433.1	-	unprocessed_pseudogene	KNOWN	CTD-2057D4.2	1	1	0.440478
chr19	29915862	29917830	29916846	ENSG00000278895.1	+	TEC	KNOWN	CTC-448F2.7	1	1	0.179455
chr19	29921182	29921653	29921417	ENSG00000267258.1	+	processed_pseudogene	KNOWN	CTC-448F2.3	1	1	0.179455
chr19	29923644	30016608	29970126	ENSG00000105176.17	+	protein_coding	KNOWN	URI1	13	11	0.071520
chr19	29956369	29956988	29956678	ENSG00000242100.2	-	processed_pseudogene	KNOWN	RPL9P32	1	1	0.185706
chr19	30028741	30029916	30029328	ENSG00000267006.1	-	lincRNA	KNOWN	CTC-448F2.4	1	1	-0.278846
chr19	30037285	30037411	30037348	ENSG00000267692.1	+	processed_pseudogene	KNOWN	TAF9P3	1	1	0.101515
chr19	30037423	30038156	30037789	ENSG00000266910.1	+	processed_pseudogene	KNOWN	CTC-448F2.6	1	1	0.101515
chr19	30219666	30228715	30224190	ENSG00000267223.1	-	antisense	KNOWN	AC005597.1	1	2	0.266866
chr19	30228290	30713538	30470914	ENSG00000198597.8	+	protein_coding	KNOWN	ZNF536	5	6	0.198301
chr19	30553956	30558058	30556007	ENSG00000280061.1	+	TEC	KNOWN	CTD-2001J20.1	1	1	0.084297
chr19	30665274	30668647	30666960	ENSG00000267760.1	-	lincRNA	KNOWN	CTC-565M22.1	1	2	0.281916
chr19	30850975	30872507	30861741	ENSG00000267081.1	+	lincRNA	KNOWN	CTC-400I9.2	1	2	0.182076
chr19	30907199	30909155	30908177	ENSG00000261316.1	+	lincRNA	KNOWN	CTC-400I9.1	1	2	0.154388
chr19	30946582	30957192	30951887	ENSG00000267378.1	+	lincRNA	KNOWN	CTC-400I9.3	1	2	0.107084
chr19	31167516	31207663	31187589	ENSG00000267777.1	+	lincRNA	KNOWN	CTC-439O9.3	1	5	0.069624
chr19	31274945	31349547	31312246	ENSG00000121297.6	-	protein_coding	KNOWN	TSHZ3	3	2	0.544483
chr19	31348881	31417794	31383337	ENSG00000267662.1	+	antisense	KNOWN	AC007796.1	1	4	0.502929
chr19	31364297	31366098	31365197	ENSG00000278875.1	+	TEC	KNOWN	CTC-439O9.1	1	1	0.689078
chr19	31421997	31427302	31424649	ENSG00000267636.1	+	lincRNA	KNOWN	AC008992.1	1	2	0.386322
chr19	31465653	31466431	31466042	ENSG00000267599.1	+	lincRNA	KNOWN	CTD-2050I18.2	1	2	0.018411
chr19	31542039	31554797	31548418	ENSG00000267407.1	+	lincRNA	KNOWN	CTD-2050I18.1	1	3	0.188224
chr19	31588040	31595720	31591880	ENSG00000261400.1	-	lincRNA	KNOWN	AC011525.2	1	2	0.345790
chr19	31588196	31593781	31590988	ENSG00000267465.6	+	lincRNA	KNOWN	AC011525.4	3	4	0.318607
chr19	31655356	31655461	31655408	ENSG00000252780.1	-	rRNA	KNOWN	RNA5SP471	1	1	0.284637
chr19	31787148	31787255	31787201	ENSG00000201894.1	-	snRNA	KNOWN	RNU6-967P	1	1	-0.110316
chr19	31886704	31908284	31897494	ENSG00000267012.1	-	lincRNA	KNOWN	CTC-360P9.1	1	3	0.011930
chr19	31922884	31945398	31934141	ENSG00000267094.1	-	lincRNA	KNOWN	CTC-360P9.5	1	7	-0.164640
chr19	31926573	31926688	31926630	ENSG00000221504.1	+	miRNA	NOVEL	AC011456.1	1	1	-0.359388
chr19	31965642	31966969	31966305	ENSG00000267684.1	-	lincRNA	KNOWN	CTC-360P9.2	1	2	0.164343
chr19	31967099	32025791	31996445	ENSG00000267489.2	-	lincRNA	KNOWN	CTC-360P9.4	2	3	0.149347
chr19	32025862	32056865	32041363	ENSG00000267779.5	+	lincRNA	KNOWN	LINC01533	5	5	0.123485
chr19	32102088	32105916	32104002	ENSG00000267204.1	-	lincRNA	KNOWN	AC011518.1	1	4	0.275789
chr19	32103583	32106537	32105060	ENSG00000267133.1	+	lincRNA	KNOWN	AC011518.2	3	2	0.275789
chr19	32243965	32244083	32244024	ENSG00000200738.1	-	rRNA	KNOWN	RNA5SP472	1	1	0.231598
chr19	32345594	32387667	32366630	ENSG00000168813.16	+	protein_coding	KNOWN	ZNF507	5	8	0.221947
chr19	32377282	32377367	32377324	ENSG00000263960.1	-	miRNA	NOVEL	AC007773.1	1	1	0.227556
chr19	32390050	32405560	32397805	ENSG00000267213.4	-	antisense	KNOWN	AC007773.2	1	3	0.537551
chr19	32405543	32485895	32445719	ENSG00000178904.18	+	protein_coding	KNOWN	DPY19L3	12	20	0.225291
chr19	32500856	32500941	32500898	ENSG00000263780.1	-	miRNA	NOVEL	AC005621.1	1	1	0.070187
chr19	32581068	32587452	32584260	ENSG00000105185.11	+	protein_coding	KNOWN	PDCD5	8	6	0.378463
chr19	32597007	32676597	32636802	ENSG00000105186.14	-	protein_coding	KNOWN	ANKRD27	10	29	0.603459
chr19	32608337	32608469	32608403	ENSG00000201388.1	-	snoRNA	NOVEL	SNORA68	1	1	0.148854
chr19	32636078	32636475	32636276	ENSG00000242325.1	+	processed_pseudogene	KNOWN	RPS12P31	1	1	0.804710
chr19	32655016	32655308	32655162	ENSG00000242436.3	-	misc_RNA	KNOWN	RN7SL789P	1	1	0.704969
chr19	32666298	32673210	32669754	ENSG00000267557.1	+	antisense	KNOWN	CTC-379B2.4	1	2	0.699123
chr19	32675407	32678300	32676853	ENSG00000186326.3	+	protein_coding	KNOWN	RGS9BP	1	1	0.692384
chr19	32687089	32691750	32689419	ENSG00000267475.1	-	lincRNA	KNOWN	CTD-2538C1.2	1	2	0.644334
chr19	32691961	32713796	32702878	ENSG00000213965.3	+	protein_coding	KNOWN	NUDT19	1	3	0.527609
chr19	32718298	32719595	32718946	ENSG00000267567.1	-	lincRNA	KNOWN	CTD-2538C1.3	1	2	0.352452
chr19	32719753	32829580	32774666	ENSG00000173809.15	+	protein_coding	KNOWN	TDRD12	3	28	0.325916
chr19	32824142	32824505	32824323	ENSG00000267245.1	-	processed_pseudogene	KNOWN	CTD-2085J24.5	1	1	0.566672
chr19	32830509	32869766	32850137	ENSG00000021488.12	-	protein_coding	KNOWN	SLC7A9	6	13	0.280703
chr19	32831295	32833168	32832231	ENSG00000267555.1	+	antisense	KNOWN	CTD-2085J24.3	1	2	0.193687
chr19	32862800	32863092	32862946	ENSG00000201967.1	-	misc_RNA	KNOWN	RN7SKP22	1	1	0.366499
chr19	32875925	32971991	32923958	ENSG00000121289.17	-	protein_coding	KNOWN	CEP89	9	19	0.408710
chr19	32963499	32963865	32963682	ENSG00000239988.1	+	processed_pseudogene	KNOWN	RPL31P60	1	1	0.408465
chr19	32972209	32978222	32975215	ENSG00000131944.9	+	protein_coding	KNOWN	FAAP24	6	5	0.343531
chr19	32978593	33064888	33021740	ENSG00000131941.7	-	protein_coding	KNOWN	RHPN2	7	15	0.541394
chr19	33051515	33051701	33051608	ENSG00000267611.1	+	processed_pseudogene	KNOWN	CTC-461H2.2	1	1	0.531615
chr19	33067175	33067433	33067304	ENSG00000267725.1	+	processed_pseudogene	KNOWN	CTC-461H2.3	1	1	0.531615
chr19	33080880	33130542	33105711	ENSG00000076650.6	+	protein_coding	KNOWN	GPATCH1	4	20	0.669970
chr19	33090303	33090416	33090359	ENSG00000281685.1	-	miRNA	NOVEL	AC008521.1	1	1	0.676954
chr19	33132090	33175795	33153942	ENSG00000166359.10	+	protein_coding	KNOWN	WDR88	3	12	0.757805
chr19	33177603	33208867	33193235	ENSG00000130881.13	+	protein_coding	KNOWN	LRP3	4	7	0.712928
chr19	33178056	33178651	33178353	ENSG00000267054.1	+	sense_intronic	KNOWN	CTD-2540B15.10	1	2	0.807015
chr19	33207129	33207639	33207384	ENSG00000273420.1	+	3prime_overlapping_ncrna	KNOWN	CTD-2540B15.13	1	1	0.651114
chr19	33208664	33225850	33217257	ENSG00000130876.11	-	protein_coding	KNOWN	SLC7A10	5	11	0.724366
chr19	33217817	33221170	33219493	ENSG00000267714.1	+	antisense	KNOWN	CTD-2540B15.6	1	4	0.730535
chr19	33283978	33285739	33284858	ENSG00000270212.1	-	lincRNA	KNOWN	CTD-2540B15.12	1	2	0.882273
chr19	33299934	33302564	33301249	ENSG00000245848.2	-	protein_coding	KNOWN	CEBPA	1	1	0.666794
chr19	33299934	33301168	33300551	ENSG00000267580.1	+	antisense	KNOWN	CTD-2540B15.11	1	2	0.666794
chr19	33301279	33301940	33301609	ENSG00000267727.1	+	antisense	KNOWN	CTD-2540B15.7	1	2	0.666794
chr19	33302857	33305054	33303955	ENSG00000267296.2	+	antisense	KNOWN	CEBPA-AS1	1	1	0.666794
chr19	33305036	33309387	33307211	ENSG00000267130.1	+	lincRNA	KNOWN	CTD-2540B15.9	1	2	0.666794
chr19	33340686	33341984	33341335	ENSG00000243864.1	+	processed_pseudogene	KNOWN	RPS3AP50	1	2	0.248111
chr19	33360497	33361448	33360972	ENSG00000266899.2	-	processed_pseudogene	KNOWN	AKR1B1P7	1	1	0.099409
chr19	33373330	33382686	33378008	ENSG00000153879.8	+	protein_coding	KNOWN	CEBPG	2	2	0.189603
chr19	33386950	33521794	33454372	ENSG00000124299.13	-	protein_coding	KNOWN	PEPD	13	15	0.620244
chr19	33555568	33557470	33556519	ENSG00000266985.1	+	lincRNA	KNOWN	CTD-2329C7.2	1	2	0.334013
chr19	33589206	33589688	33589447	ENSG00000232429.3	-	processed_pseudogene	KNOWN	RPL21P131	1	1	0.068659
chr19	33621955	33773509	33697732	ENSG00000124302.12	+	protein_coding	KNOWN	CHST8	5	5	0.429094
chr19	33795933	33815763	33805848	ENSG00000153885.14	+	protein_coding	KNOWN	KCTD15	12	8	0.753851
chr19	33906352	33908391	33907371	ENSG00000277013.1	+	lincRNA	KNOWN	CTC-526N19.1	1	1	0.220148
chr19	33927364	33927625	33927494	ENSG00000240626.3	-	misc_RNA	KNOWN	RN7SL150P	1	1	0.060965
chr19	34021659	34021895	34021777	ENSG00000239253.1	+	processed_pseudogene	KNOWN	RPS4XP23	1	1	-0.172554
chr19	34022656	34023427	34023041	ENSG00000249987.1	-	processed_pseudogene	KNOWN	RPS4XP20	1	1	-0.172554
chr19	34092561	34093310	34092935	ENSG00000186008.7	-	processed_pseudogene	KNOWN	RPS4XP21	1	1	0.339919
chr19	34126973	34127423	34127198	ENSG00000270849.1	+	processed_pseudogene	KNOWN	CHCHD2P3	1	1	0.171281
chr19	34172504	34229515	34201009	ENSG00000257103.8	+	protein_coding	KNOWN	LSM14A	8	11	0.477579
chr19	34254537	34355586	34305061	ENSG00000166398.12	+	protein_coding	KNOWN	KIAA0355	7	14	0.638968
chr19	34296277	34296592	34296434	ENSG00000257074.3	-	processed_pseudogene	KNOWN	RPL29P33	1	1	0.533881
chr19	34348356	34359412	34353884	ENSG00000267219.1	-	antisense	KNOWN	AC010504.2	1	3	0.729949
chr19	34359480	34402156	34380818	ENSG00000105220.14	+	protein_coding	KNOWN	GPI	17	19	0.850762
chr19	34396315	34409364	34402839	ENSG00000266953.6	+	protein_coding	KNOWN	RP11-618P17.4	2	5	1.020831
chr19	34404384	34426168	34415276	ENSG00000126249.7	+	protein_coding	KNOWN	PDCD2L	5	7	0.948447
chr19	34421988	34422311	34422149	ENSG00000264317.2	-	misc_RNA	KNOWN	RN7SL154P	1	1	0.923310
chr19	34426112	34428273	34427192	ENSG00000267024.1	-	antisense	KNOWN	CTD-2588C8.8	1	2	0.923310
chr19	34428352	34471251	34449801	ENSG00000126261.12	+	protein_coding	KNOWN	UBA2	10	17	0.514044
chr19	34481638	34512304	34496971	ENSG00000142279.12	+	protein_coding	KNOWN	WTIP	2	8	1.078324
chr19	34533427	34534084	34533755	ENSG00000239210.2	-	processed_pseudogene	KNOWN	RPS26P55	1	2	0.144459
chr19	34542462	34545395	34543928	ENSG00000248830.1	-	unprocessed_pseudogene	KNOWN	ZNF807	1	3	0.144459
chr19	34576733	34577701	34577217	ENSG00000268751.1	-	lincRNA	KNOWN	SCGB1B2P	2	3	0.078053
chr19	34593329	34675699	34634514	ENSG00000205209.7	-	protein_coding	KNOWN	SCGB2B2	3	4	0.221018
chr19	34634844	34635717	34635280	ENSG00000271049.1	+	processed_pseudogene	KNOWN	CTD-2553L13.7	1	1	0.145290
chr19	34637696	34637781	34637738	ENSG00000252230.1	-	snoRNA	NOVEL	SNORD111	1	1	0.145290
chr19	34638122	34640689	34639405	ENSG00000268683.1	-	sense_intronic	KNOWN	CTD-2553L13.4	1	2	0.145290
chr19	34645380	34646838	34646109	ENSG00000279971.1	+	TEC	KNOWN	CTD-2553L13.5	1	1	0.145290
chr19	34645662	34646070	34645866	ENSG00000269811.2	+	processed_pseudogene	KNOWN	SCGB2B3P	1	1	0.145290
chr19	34675717	34677581	34676649	ENSG00000279329.1	-	TEC	KNOWN	CTD-2553L13.9	1	1	0.399814
chr19	34677639	34686397	34682018	ENSG00000089335.20	+	protein_coding	KNOWN	ZNF302	15	7	0.399814
chr19	34733298	34733837	34733567	ENSG00000274104.1	-	lincRNA	KNOWN	CTD-2553L13.10	1	1	0.237843
chr19	34734155	34745378	34739766	ENSG00000197841.14	+	protein_coding	KNOWN	ZNF181	7	6	0.237843
chr19	34758076	34773229	34765652	ENSG00000153896.17	-	protein_coding	KNOWN	ZNF599	4	4	0.242653
chr19	34779412	34780021	34779716	ENSG00000270281.1	-	processed_pseudogene	KNOWN	CTC-523E23.10	1	1	0.277405
chr19	34788582	34832869	34810725	ENSG00000267767.2	-	lincRNA	KNOWN	CTC-523E23.4	2	6	0.367348
chr19	34811589	34814345	34812967	ENSG00000261754.2	-	lincRNA	KNOWN	CTC-523E23.1	1	1	0.635134
chr19	34825414	34825996	34825705	ENSG00000271666.1	+	processed_pseudogene	KNOWN	CTC-523E23.9	1	1	0.635134
chr19	34837889	34855304	34846596	ENSG00000269086.2	+	lincRNA	KNOWN	CTC-523E23.5	2	6	-0.014794
chr19	34849278	34860576	34854927	ENSG00000271109.1	-	lincRNA	KNOWN	CTC-523E23.11	2	3	0.262136
chr19	34866352	34866919	34866635	ENSG00000270624.1	+	processed_pseudogene	KNOWN	LOC401913	1	1	0.290119
chr19	34892029	34898943	34895486	ENSG00000271649.1	-	lincRNA	KNOWN	LINC00904	1	3	0.114476
chr19	34902202	34904195	34903198	ENSG00000270544.1	-	lincRNA	KNOWN	CTC-523E23.14	1	3	0.114476
chr19	34904392	34905057	34904724	ENSG00000271171.1	-	lincRNA	KNOWN	CTC-523E23.15	1	2	0.114476
chr19	34905315	34908188	34906751	ENSG00000269037.1	+	lincRNA	KNOWN	CTC-523E23.6	1	2	0.114476
chr19	34923299	34926812	34925055	ENSG00000270876.1	-	lincRNA	KNOWN	ZNF30-AS1	1	2	0.210828
chr19	34926903	34945170	34936036	ENSG00000168661.14	+	protein_coding	KNOWN	ZNF30	6	6	0.633270
chr19	34949038	34951205	34950121	ENSG00000280106.1	-	TEC	KNOWN	CTC-523E23.3	1	1	0.455285
chr19	34956354	34964049	34960201	ENSG00000180884.9	-	protein_coding	KNOWN	ZNF792	2	4	0.244762
chr19	34994784	35026471	35010627	ENSG00000089351.14	+	protein_coding	KNOWN	GRAMD1A	14	20	0.971637
chr19	34998233	35000170	34999201	ENSG00000269303.1	-	antisense	KNOWN	CTD-2527I21.7	1	3	0.798546
chr19	35014961	35025335	35020148	ENSG00000271032.1	-	antisense	KNOWN	CTD-2527I21.14	1	2	1.131520
chr19	35030684	35040448	35035566	ENSG00000105711.10	+	protein_coding	KNOWN	SCN1B	5	6	0.979047
chr19	35036334	35037060	35036697	ENSG00000267874.1	+	sense_intronic	KNOWN	CTD-2527I21.9	1	2	0.979047
chr19	35040506	35066571	35053538	ENSG00000105707.13	+	protein_coding	KNOWN	HPN	9	14	0.973631
chr19	35059059	35106304	35082681	ENSG00000227392.1	-	antisense	KNOWN	HPN-AS1	1	4	0.935357
chr19	35105969	35107318	35106643	ENSG00000179066.7	+	lincRNA	KNOWN	CTD-2527I21.15	2	1	0.903919
chr19	35115879	35124324	35120101	ENSG00000089356.16	+	protein_coding	KNOWN	FXYD3	14	10	0.742658
chr19	35122700	35122764	35122732	ENSG00000278663.1	+	miRNA	KNOWN	MIR6887	1	1	0.742658
chr19	35124513	35142451	35133482	ENSG00000153902.13	-	protein_coding	KNOWN	LGI4	9	10	0.842495
chr19	35137645	35139580	35138612	ENSG00000279619.1	-	TEC	KNOWN	CTD-2527I21.5	1	1	0.886481
chr19	35138808	35143109	35140958	ENSG00000266964.5	+	protein_coding	KNOWN	FXYD1	11	8	0.886481
chr19	35138824	35151336	35145080	ENSG00000221857.7	+	processed_transcript	KNOWN	CTD-2527I21.4	2	11	0.893012
chr19	35143250	35154301	35148775	ENSG00000221946.7	+	protein_coding	KNOWN	FXYD7	4	6	0.910275
chr19	35154730	35169883	35162306	ENSG00000089327.14	+	protein_coding	KNOWN	FXYD5	13	10	0.947602
chr19	35224800	35228729	35226764	ENSG00000177558.3	-	protein_coding	KNOWN	FAM187B	1	2	0.821578
chr19	35232291	35233003	35232647	ENSG00000262497.1	-	unprocessed_pseudogene	KNOWN	FAM187B2P	1	1	0.600139
chr19	35248330	35267964	35258147	ENSG00000105699.16	+	protein_coding	KNOWN	LSR	14	10	0.486676
chr19	35251440	35253639	35252539	ENSG00000271366.1	-	antisense	KNOWN	AC002128.5	1	2	0.476135
chr19	35262846	35264804	35263825	ENSG00000268947.1	+	sense_intronic	KNOWN	AD000684.2	1	2	0.476135
chr19	35268978	35279821	35274399	ENSG00000105698.15	+	protein_coding	KNOWN	USF2	16	10	1.046196
chr19	35280716	35285143	35282929	ENSG00000105697.7	+	protein_coding	KNOWN	HAMP	3	4	1.105454
chr19	35292125	35313804	35302964	ENSG00000105695.14	+	protein_coding	KNOWN	MAG	8	12	0.737156
chr19	35319261	35347355	35333308	ENSG00000012124.14	+	protein_coding	KNOWN	CD22	35	14	0.788383
chr19	35330843	35331920	35331381	ENSG00000269553.1	+	sense_intronic	KNOWN	U62631.5	1	2	0.758136
chr19	35345513	35345627	35345570	ENSG00000263397.1	+	miRNA	KNOWN	MIR5196	1	1	0.758136
chr19	35351552	35353862	35352707	ENSG00000126266.3	+	protein_coding	KNOWN	FFAR1	1	1	0.726039
chr19	35358460	35360485	35359472	ENSG00000185897.6	+	protein_coding	KNOWN	FFAR3	2	2	0.726039
chr19	35370929	35372962	35371945	ENSG00000126251.6	+	protein_coding	KNOWN	GPR42	2	2	0.682668
chr19	35382172	35384052	35383112	ENSG00000268222.1	+	processed_pseudogene	KNOWN	EEF1A1P7	1	2	0.682668
chr19	35399511	35419385	35409448	ENSG00000205786.8	+	lincRNA	KNOWN	LINC01531	7	7	0.338638
chr19	35414881	35415149	35415015	ENSG00000264400.2	-	misc_RNA	KNOWN	RN7SL491P	1	1	0.404376
chr19	35424062	35424652	35424357	ENSG00000233214.1	-	lincRNA	KNOWN	AC002511.2	1	2	0.404376
chr19	35432957	35434642	35433799	ENSG00000232680.2	-	lincRNA	KNOWN	AC002511.3	1	4	0.477282
chr19	35443907	35451767	35447837	ENSG00000126262.4	+	protein_coding	KNOWN	FFAR2	3	2	0.486408
chr19	35487324	35495558	35491441	ENSG00000188508.10	-	protein_coding	KNOWN	KRTDAP	3	6	0.647820
chr19	35497220	35513658	35505439	ENSG00000161249.20	-	protein_coding	KNOWN	DMKN	68	18	0.802683
chr19	35523367	35528351	35525859	ENSG00000189001.10	-	protein_coding	KNOWN	SBSN	3	5	0.912859
chr19	35533412	35545316	35539364	ENSG00000105679.8	+	protein_coding	KNOWN	GAPDHS	3	11	1.137002
chr19	35540738	35546029	35543383	ENSG00000236144.6	-	antisense	KNOWN	TMEM147-AS1	5	4	1.137002
chr19	35545595	35547526	35546560	ENSG00000105677.11	+	protein_coding	KNOWN	TMEM147	9	7	1.137002
chr19	35550043	35563658	35556850	ENSG00000105675.8	-	protein_coding	KNOWN	ATP4A	4	22	1.032403
chr19	35553831	35553895	35553863	ENSG00000278423.1	-	miRNA	NOVEL	AC002389.1	1	1	1.032403
chr19	35597907	35601501	35599704	ENSG00000224910.1	+	lincRNA	KNOWN	AC002115.5	1	3	0.480764
chr19	35608285	35612666	35610475	ENSG00000267626.1	-	lincRNA	KNOWN	AC002115.9	1	2	0.628186
chr19	35612744	35625349	35619046	ENSG00000249115.8	+	protein_coding	KNOWN	HAUS5	9	19	0.722930
chr19	35629030	35637686	35633358	ENSG00000126254.11	+	protein_coding	KNOWN	RBM42	7	10	1.182710
chr19	35641745	35644871	35643308	ENSG00000105672.14	+	protein_coding	KNOWN	ETV2	8	10	1.240669
chr19	35648223	35658861	35653542	ENSG00000126267.8	+	protein_coding	KNOWN	COX6B1	4	4	1.232208
chr19	35666516	35678483	35672499	ENSG00000105668.7	+	protein_coding	KNOWN	UPK1A	4	9	0.869944
chr19	35667948	35673291	35670619	ENSG00000226510.1	-	antisense	KNOWN	UPK1A-AS1	1	2	0.917150
chr19	35683778	35684201	35683989	ENSG00000267190.1	-	processed_pseudogene	KNOWN	AC002314.4	1	1	0.721918
chr19	35704527	35717038	35710782	ENSG00000011590.13	+	protein_coding	KNOWN	ZBTB32	6	7	1.166803
chr19	35718019	35738878	35728448	ENSG00000272333.5	+	protein_coding	KNOWN	KMT2B	5	37	1.396190
chr19	35738801	35742453	35740627	ENSG00000126246.9	-	protein_coding	KNOWN	IGFLR1	11	5	1.496588
chr19	35739252	35745432	35742342	ENSG00000267120.3	-	protein_coding	KNOWN	AD000671.6	1	11	1.496588
chr19	35742464	35745445	35743954	ENSG00000161265.14	-	protein_coding	KNOWN	U2AF1L4	21	8	1.496588
chr19	35745114	35747519	35746316	ENSG00000205155.7	+	protein_coding	KNOWN	PSENEN	3	4	1.496588
chr19	35745678	35754519	35750098	ENSG00000188223.9	+	protein_coding	KNOWN	AC002398.9	1	11	1.408496
chr19	35747057	35753415	35750236	ENSG00000267439.1	-	antisense	KNOWN	AC002398.11	2	2	1.404013
chr19	35748361	35754519	35751440	ENSG00000267796.7	+	protein_coding	KNOWN	LIN37	9	9	1.370115
chr19	35754566	35755490	35755028	ENSG00000267328.1	+	antisense	KNOWN	AC002398.12	1	2	1.324283
chr19	35754568	35758079	35756323	ENSG00000004776.11	-	protein_coding	KNOWN	HSPB6	3	4	1.324283
chr19	35758143	35771028	35764585	ENSG00000167595.14	+	protein_coding	KNOWN	PROSER3	16	11	1.336219
chr19	35769144	35771028	35770086	ENSG00000267049.1	-	antisense	KNOWN	AC002398.13	1	2	1.405913
chr19	35774532	35788822	35781677	ENSG00000004777.18	+	protein_coding	KNOWN	ARHGAP33	13	21	1.473740
chr19	35788876	35797885	35793380	ENSG00000225872.2	-	lincRNA	KNOWN	LINC01529	3	8	1.288321
chr19	35799988	35813299	35806643	ENSG00000250799.9	-	protein_coding	KNOWN	PRODH2	6	11	1.188669
chr19	35825964	35869287	35847625	ENSG00000161270.19	-	protein_coding	KNOWN	NPHS1	5	29	0.910466
chr19	35855861	35867109	35861485	ENSG00000126259.19	+	protein_coding	KNOWN	KIRREL2	5	16	1.100120
chr19	35867899	35879791	35873845	ENSG00000105290.11	+	protein_coding	KNOWN	APLP1	11	17	1.024399
chr19	35881890	35882153	35882021	ENSG00000243968.2	+	misc_RNA	KNOWN	RN7SL402P	1	1	1.008160
chr19	35887653	35902303	35894978	ENSG00000167604.13	-	protein_coding	KNOWN	NFKBID	10	12	1.052903
chr19	35901561	35903855	35902708	ENSG00000280194.1	-	TEC	KNOWN	AD000864.6	1	1	1.061434
chr19	35902480	35904377	35903428	ENSG00000126264.9	+	protein_coding	KNOWN	HCST	2	4	1.061434
chr19	35904401	35908295	35906348	ENSG00000011600.11	-	protein_coding	KNOWN	TYROBP	9	5	1.061434
chr19	35935358	35945767	35940562	ENSG00000126243.8	+	protein_coding	KNOWN	LRFN3	4	4	0.854492
chr19	35947115	35959192	35953153	ENSG00000267786.1	+	lincRNA	KNOWN	AF038458.3	1	4	0.921517
chr19	35957121	35957382	35957251	ENSG00000267113.1	-	processed_pseudogene	KNOWN	AF038458.4	1	1	0.942544
chr19	35960512	35964063	35962287	ENSG00000267388.1	+	lincRNA	KNOWN	AF038458.5	1	2	0.942544
chr19	35995199	35996315	35995757	ENSG00000205138.3	+	protein_coding	KNOWN	SDHAF1	1	1	0.991880
chr19	36003307	36008793	36006050	ENSG00000181392.14	-	protein_coding	KNOWN	SYNE4	7	8	0.991880
chr19	36008638	36014235	36011436	ENSG00000248101.2	-	processed_transcript	KNOWN	AC002116.8	1	7	1.218283
chr19	36009120	36014239	36011679	ENSG00000239382.10	-	protein_coding	KNOWN	ALKBH6	19	8	1.239658
chr19	36014508	36045972	36030240	ENSG00000267698.1	+	antisense	KNOWN	AC002116.7	1	4	1.220294
chr19	36014660	36033343	36024001	ENSG00000105270.14	-	protein_coding	KNOWN	CLIP3	6	14	1.266087
chr19	36034985	36054762	36044873	ENSG00000161277.10	-	protein_coding	KNOWN	THAP8	4	4	1.045239
chr19	36054881	36105106	36079993	ENSG00000075702.16	+	protein_coding	KNOWN	WDR62	7	32	0.880875
chr19	36070239	36071070	36070654	ENSG00000280023.1	+	TEC	KNOWN	LLNLR-276H7.1	1	1	0.801212
chr19	36111151	36113711	36112431	ENSG00000105261.7	+	protein_coding	KNOWN	OVOL3	2	4	1.250140
chr19	36113710	36115346	36114528	ENSG00000105258.8	-	protein_coding	KNOWN	POLR2I	7	6	1.250140
chr19	36114289	36125947	36120118	ENSG00000105254.11	+	protein_coding	KNOWN	TBCB	14	6	1.250140
chr19	36114362	36115146	36114754	ENSG00000279504.1	+	TEC	KNOWN	AD001527.4	1	1	1.250140
chr19	36139575	36150353	36144964	ENSG00000126247.10	+	protein_coding	KNOWN	CAPNS1	17	11	1.078284
chr19	36144081	36148348	36146214	ENSG00000270760.1	-	antisense	KNOWN	AD001527.7	1	2	1.068224
chr19	36150922	36152869	36151895	ENSG00000161281.10	-	protein_coding	KNOWN	COX7A1	4	4	1.374505
chr19	36173406	36173853	36173629	ENSG00000267005.1	-	processed_pseudogene	KNOWN	AC002984.2	1	1	0.842272
chr19	36182060	36246257	36214158	ENSG00000196357.11	-	protein_coding	KNOWN	ZNF565	7	6	0.723303
chr19	36203347	36203459	36203403	ENSG00000200179.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.759055
chr19	36214602	36238774	36226688	ENSG00000167635.11	+	protein_coding	KNOWN	ZNF146	5	4	0.714411
chr19	36304580	36312668	36308624	ENSG00000267053.6	+	lincRNA	KNOWN	CTD-3162L10.1	6	3	0.866537
chr19	36313067	36331718	36322392	ENSG00000232677.6	-	lincRNA	KNOWN	LINC00665	8	6	0.764377
chr19	36334453	36379199	36356826	ENSG00000142065.13	-	protein_coding	KNOWN	ZFP14	2	5	0.450156
chr19	36378028	36378832	36378430	ENSG00000266973.1	+	antisense	KNOWN	CTD-3162L10.3	1	2	0.458935
chr19	36379351	36380912	36380131	ENSG00000267363.1	-	lincRNA	KNOWN	CTD-3162L10.4	1	2	0.458935
chr19	36383120	36418656	36400888	ENSG00000181007.8	-	protein_coding	KNOWN	ZFP82	3	5	0.210788
chr19	36421536	36422534	36422035	ENSG00000267142.1	+	processed_pseudogene	KNOWN	CTD-3162L10.5	1	1	0.288057
chr19	36445119	36489902	36467510	ENSG00000186017.14	-	protein_coding	KNOWN	ZNF566	11	5	0.187733
chr19	36489649	36491040	36490344	ENSG00000267309.1	+	antisense	KNOWN	CTD-2630F21.1	1	1	0.322573
chr19	36496916	36498159	36497537	ENSG00000267091.1	-	processed_pseudogene	KNOWN	CTBP2P7	1	1	0.389378
chr19	36510695	36528660	36519677	ENSG00000254004.6	-	protein_coding	KNOWN	ZNF260	5	4	0.376135
chr19	36528318	36535235	36531776	ENSG00000228629.2	+	antisense	KNOWN	AC092295.4	1	3	0.481624
chr19	36534774	36605276	36570025	ENSG00000186020.12	-	protein_coding	KNOWN	ZNF529	9	6	0.470261
chr19	36573070	36594708	36583889	ENSG00000233527.8	+	antisense	KNOWN	ZNF529-AS1	4	5	0.524106
chr19	36604817	36634113	36619465	ENSG00000161298.16	+	protein_coding	KNOWN	ZNF382	9	5	0.260609
chr19	36637192	36666853	36652022	ENSG00000197808.11	-	protein_coding	KNOWN	ZNF461	14	6	0.439164
chr19	36668102	36669404	36668753	ENSG00000276071.1	+	lincRNA	KNOWN	CTD-3234P18.6	1	1	0.636877
chr19	36685440	36687449	36686444	ENSG00000225975.6	-	lincRNA	KNOWN	LINC01534	3	4	0.689391
chr19	36687612	36727701	36707656	ENSG00000189042.13	+	protein_coding	KNOWN	ZNF567	7	6	0.311248
chr19	36714383	36772825	36743604	ENSG00000267041.5	-	protein_coding	KNOWN	ZNF850	3	5	0.363860
chr19	36773153	36777078	36775115	ENSG00000267260.1	+	lincRNA	KNOWN	CTD-2162K18.4	2	2	0.723347
chr19	36773712	36775908	36774810	ENSG00000267353.1	-	lincRNA	KNOWN	CTD-2162K18.3	1	1	0.723347
chr19	36797518	36828115	36812816	ENSG00000267254.5	+	antisense	KNOWN	ZNF790-AS1	4	4	0.274157
chr19	36817428	36850787	36834107	ENSG00000197863.8	-	protein_coding	KNOWN	ZNF790	8	5	0.313968
chr19	36850361	36913029	36881695	ENSG00000251247.9	+	protein_coding	KNOWN	ZNF345	15	5	0.299968
chr19	36858227	36858329	36858278	ENSG00000206669.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.817132
chr19	36888124	36916291	36902207	ENSG00000185869.13	-	protein_coding	KNOWN	ZNF829	4	7	0.001735
chr19	36901742	36902117	36901929	ENSG00000243297.2	+	processed_pseudogene	KNOWN	RPL31P61	1	1	-0.086546
chr19	36916329	36998700	36957514	ENSG00000198453.12	+	protein_coding	KNOWN	ZNF568	16	10	0.078737
chr19	37007857	37130314	37069085	ENSG00000197050.10	+	protein_coding	KNOWN	ZNF420	9	6	0.319338
chr19	37024886	37025254	37025070	ENSG00000275547.1	-	unprocessed_pseudogene	KNOWN	CTD-2293H3.3	1	1	0.454562
chr19	37075113	37078605	37076859	ENSG00000267345.1	-	antisense	KNOWN	CTD-2293H3.2	1	2	0.460636
chr19	37091341	37092564	37091952	ENSG00000267672.1	+	sense_intronic	KNOWN	CTD-2293H3.1	1	1	0.368405
chr19	37093019	37210512	37151765	ENSG00000267360.6	-	protein_coding	KNOWN	CTC-454I21.3	3	5	0.215647
chr19	37106734	37172741	37139737	ENSG00000196967.10	-	protein_coding	KNOWN	ZNF585A	6	10	0.153905
chr19	37128679	37141640	37135159	ENSG00000267437.1	-	antisense	KNOWN	CTC-454I21.4	1	3	-0.033191
chr19	37181579	37218153	37199866	ENSG00000245680.9	-	protein_coding	KNOWN	ZNF585B	9	6	0.381230
chr19	37217926	37248738	37233332	ENSG00000188283.11	+	protein_coding	KNOWN	ZNF383	8	8	0.400442
chr19	37251912	37265535	37258723	ENSG00000226686.7	+	lincRNA	KNOWN	LINC01535	6	8	0.256379
chr19	37265939	37271518	37268728	ENSG00000267605.5	-	lincRNA	KNOWN	CTD-3220F14.1	5	4	0.427927
chr19	37312837	37369365	37341101	ENSG00000181666.17	+	protein_coding	KNOWN	HKR1	27	9	0.598769
chr19	37314868	37315620	37315244	ENSG00000276846.1	-	antisense	KNOWN	CTD-3220F14.3	1	1	0.676954
chr19	37337236	37337743	37337489	ENSG00000267682.1	+	sense_intronic	KNOWN	CTD-3220F14.2	1	2	0.641330
chr19	37371061	37393066	37382063	ENSG00000189164.14	+	protein_coding	KNOWN	ZNF527	7	7	0.623607
chr19	37401404	37403846	37402625	ENSG00000279936.1	-	TEC	KNOWN	CTD-2086O20.1	1	1	0.068659
chr19	37411155	37469275	37440215	ENSG00000196437.10	-	protein_coding	KNOWN	ZNF569	8	9	0.105607
chr19	37467585	37488652	37478118	ENSG00000171827.10	+	protein_coding	KNOWN	ZNF570	7	6	0.571058
chr19	37497159	37507046	37502102	ENSG00000266916.5	-	antisense	KNOWN	ZNF793-AS1	5	3	0.117678
chr19	37503906	37504465	37504185	ENSG00000267115.1	-	lincRNA	KNOWN	CTD-3064H18.2	1	1	0.117678
chr19	37506939	37548762	37527850	ENSG00000188227.12	+	protein_coding	KNOWN	ZNF793	10	8	0.331364
chr19	37545470	37549171	37547320	ENSG00000180458.2	-	antisense	KNOWN	CTD-3064H18.4	1	2	0.253273
chr19	37548914	37587348	37568131	ENSG00000267470.5	+	antisense	KNOWN	ZNF571-AS1	12	6	0.173729
chr19	37551406	37614097	37582751	ENSG00000171817.16	+	protein_coding	KNOWN	ZNF540	10	6	0.159411
chr19	37554782	37594790	37574786	ENSG00000180479.13	-	protein_coding	KNOWN	ZNF571	6	5	0.139862
chr19	37613749	37692337	37653043	ENSG00000120784.15	-	protein_coding	KNOWN	ZFP30	12	7	0.218659
chr19	37667751	37692322	37680036	ENSG00000196381.10	-	protein_coding	KNOWN	ZNF781	4	5	0.254834
chr19	37689865	37719188	37704526	ENSG00000267552.6	-	protein_coding	KNOWN	CTD-2528L19.4	3	7	0.278538
chr19	37693280	37693564	37693422	ENSG00000267319.1	-	processed_pseudogene	KNOWN	CTD-2528L19.3	1	1	0.406502
chr19	37696363	37719790	37708076	ENSG00000198182.12	-	protein_coding	KNOWN	ZNF607	5	6	0.236963
chr19	37728586	37730643	37729614	ENSG00000267152.1	-	lincRNA	KNOWN	CTD-2528L19.6	1	2	0.107309
chr19	37735833	37817300	37776566	ENSG00000189144.13	-	protein_coding	KNOWN	ZNF573	19	8	0.251055
chr19	37779686	37792865	37786275	ENSG00000267422.1	+	transcribed_processed_pseudogene	KNOWN	CTD-2554C21.1	2	2	0.249948
chr19	37817359	37826638	37821998	ENSG00000267640.5	+	lincRNA	KNOWN	CTD-2554C21.2	5	5	0.115839
chr19	37823722	37855215	37839468	ENSG00000225868.6	-	lincRNA	KNOWN	AC016582.2	4	6	0.171483
chr19	37829551	37832160	37830855	ENSG00000229481.2	+	lincRNA	KNOWN	CTD-2554C21.3	1	1	0.188497
chr19	37884823	37906677	37895750	ENSG00000171804.9	-	protein_coding	KNOWN	WDR87	4	7	0.632917
chr19	37907228	38208372	38057800	ENSG00000105738.10	+	protein_coding	KNOWN	SIPA1L3	12	22	0.908415
chr19	37963853	37964790	37964321	ENSG00000268051.1	+	sense_intronic	KNOWN	CTC-244M17.1	1	2	0.674072
chr19	38053878	38053965	38053921	ENSG00000221258.1	-	miRNA	NOVEL	AC011465.1	1	1	0.802962
chr19	38108500	38109533	38109016	ENSG00000268764.1	-	antisense	KNOWN	CTC-450M9.1	1	2	0.963005
chr19	38184376	38186265	38185320	ENSG00000269653.1	+	sense_intronic	KNOWN	CTB-102L5.7	1	1	0.828957
chr19	38199836	38200934	38200385	ENSG00000268499.1	+	sense_intronic	KNOWN	CTB-102L5.8	1	2	0.990940
chr19	38200234	38200532	38200383	ENSG00000275132.1	+	misc_RNA	KNOWN	RN7SL663P	1	1	0.990940
chr19	38211006	38229714	38220360	ENSG00000011332.19	-	protein_coding	KNOWN	DPF1	17	12	1.001346
chr19	38244035	38292614	38268324	ENSG00000167642.12	+	protein_coding	KNOWN	SPINT2	11	7	1.027995
chr19	38251237	38256591	38253914	ENSG00000167641.10	-	protein_coding	KNOWN	PPP1R14A	5	4	1.059674
chr19	38289151	38304910	38297030	ENSG00000267748.4	+	protein_coding	KNOWN	CTB-102L5.4	2	6	0.768071
chr19	38294544	38294636	38294590	ENSG00000200209.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.752200
chr19	38304161	38305009	38304585	ENSG00000167644.11	+	protein_coding	KNOWN	C19orf33	4	4	0.752200
chr19	38305104	38317273	38311188	ENSG00000167645.16	-	protein_coding	KNOWN	YIF1B	16	9	1.002901
chr19	38319844	38332076	38325960	ENSG00000099337.4	+	protein_coding	KNOWN	KCNK6	2	3	1.144176
chr19	38335775	38370943	38353359	ENSG00000099338.22	+	protein_coding	KNOWN	CATSPERG	16	29	0.978947
chr19	38361795	38362484	38362139	ENSG00000266963.1	-	antisense	KNOWN	AC005625.1	1	2	0.961205
chr19	38374536	38383824	38379180	ENSG00000099341.11	+	protein_coding	KNOWN	PSMD8	10	7	0.886182
chr19	38384265	38388082	38386173	ENSG00000179168.14	-	protein_coding	KNOWN	GGN	5	5	0.886182
chr19	38385522	38386759	38386140	ENSG00000267090.1	+	antisense	KNOWN	AC005789.9	1	2	0.886182
chr19	38388421	38399587	38394004	ENSG00000188766.12	+	protein_coding	KNOWN	SPRED3	7	6	1.070392
chr19	38403135	38409088	38406111	ENSG00000130244.12	+	protein_coding	KNOWN	FAM98C	10	8	1.100709
chr19	38409051	38426305	38417678	ENSG00000171777.15	-	protein_coding	KNOWN	RASGRP4	20	18	0.986786
chr19	38433699	38587564	38510631	ENSG00000196218.11	+	protein_coding	KNOWN	RYR1	11	107	0.850053
chr19	38526954	38528555	38527754	ENSG00000269445.1	-	antisense	KNOWN	AC067969.1	1	3	0.923676
chr19	38535517	38537128	38536322	ENSG00000268055.1	-	antisense	KNOWN	AC067969.2	1	2	1.036850
chr19	38535953	38536046	38535999	ENSG00000280910.1	-	miRNA	NOVEL	AC067969.3	1	1	1.036850
chr19	38587641	38618882	38603261	ENSG00000104814.12	-	protein_coding	KNOWN	MAP4K1	15	32	0.849269
chr19	38596346	38601694	38599020	ENSG00000267291.1	+	antisense	KNOWN	CTB-186G2.1	1	3	0.818973
chr19	38619082	38636955	38628018	ENSG00000178982.9	+	protein_coding	KNOWN	EIF3K	14	8	0.981198
chr19	38647649	38731583	38689616	ENSG00000130402.11	+	protein_coding	KNOWN	ACTN4	11	21	1.124201
chr19	38683873	38693606	38688739	ENSG00000267375.1	-	antisense	KNOWN	CTB-186G2.4	1	2	1.132588
chr19	38730187	38769904	38750045	ENSG00000182472.8	-	protein_coding	KNOWN	CAPN12	12	21	1.283751
chr19	38738284	38739863	38739073	ENSG00000267892.1	+	antisense	KNOWN	CTD-2540F13.2	1	1	1.467599
chr19	38770971	38773492	38772231	ENSG00000205076.4	-	protein_coding	KNOWN	LGALS7	2	4	0.964074
chr19	38789211	38791749	38790480	ENSG00000178934.4	+	protein_coding	KNOWN	LGALS7B	2	4	0.976835
chr19	38797002	38797109	38797055	ENSG00000207296.1	-	snRNA	KNOWN	RNU6-140P	1	1	0.982581
chr19	38801671	38813364	38807517	ENSG00000171747.8	-	protein_coding	KNOWN	LGALS4	9	10	0.989113
chr19	38815422	38832005	38823713	ENSG00000104823.8	-	protein_coding	KNOWN	ECH1	17	10	1.004637
chr19	38817471	38840178	38828824	ENSG00000268083.5	-	protein_coding	KNOWN	AC104534.3	2	8	1.002897
chr19	38820166	38823223	38821694	ENSG00000268756.1	+	antisense	KNOWN	AC104534.2	1	2	1.005280
chr19	38836388	38852347	38844367	ENSG00000104824.16	-	protein_coding	KNOWN	HNRNPL	14	14	1.010222
chr19	38844729	38845499	38845114	ENSG00000269688.1	-	sense_intronic	KNOWN	AC008982.2	1	2	0.999963
chr19	38867834	38878279	38873056	ENSG00000187994.13	-	protein_coding	KNOWN	RINL	10	12	1.028304
chr19	38870159	38873763	38871961	ENSG00000269050.1	+	antisense	KNOWN	CTC-360G5.6	1	3	1.017482
chr19	38878555	38899862	38889208	ENSG00000068903.19	-	protein_coding	KNOWN	SIRT2	19	16	1.094821
chr19	38899700	38908893	38904296	ENSG00000104825.16	+	protein_coding	KNOWN	NFKBIB	6	6	1.184558
chr19	38908980	38912158	38910569	ENSG00000262484.1	-	protein_coding	KNOWN	CCER2	2	5	1.188455
chr19	38915266	38930896	38923081	ENSG00000104835.14	-	protein_coding	KNOWN	SARS2	14	17	1.176900
chr19	38915404	38949855	38932629	ENSG00000269547.1	-	protein_coding	KNOWN	CTC-360G5.8	1	20	1.055779
chr19	38930548	38933162	38931855	ENSG00000128626.11	+	protein_coding	KNOWN	MRPS12	4	3	0.956904
chr19	38935297	38938632	38936964	ENSG00000269486.2	-	lincRNA	KNOWN	CTC-360G5.9	1	1	0.956904
chr19	38941401	38975910	38958655	ENSG00000269190.5	-	protein_coding	KNOWN	FBXO17	7	6	0.851480
chr19	38990714	39032785	39011749	ENSG00000161243.8	-	protein_coding	KNOWN	FBXO27	7	7	0.674356
chr19	39030436	39031323	39030879	ENSG00000267992.1	+	antisense	KNOWN	CTB-189B5.3	1	2	0.785713
chr19	39083913	39111493	39097703	ENSG00000183760.10	+	protein_coding	KNOWN	PAPL	4	13	0.844523
chr19	39125770	39182816	39154293	ENSG00000130669.17	+	protein_coding	KNOWN	PAK4	12	11	1.002927
chr19	39134882	39136463	39135672	ENSG00000269172.1	-	antisense	KNOWN	CTC-218B8.3	1	2	0.904132
chr19	39196961	39201884	39199422	ENSG00000188505.4	+	protein_coding	KNOWN	NCCRP1	1	6	0.730655
chr19	39202831	39204266	39203548	ENSG00000179751.6	-	protein_coding	KNOWN	SYCN	1	2	0.730655
chr19	39236433	39237293	39236863	ENSG00000268510.1	-	unprocessed_pseudogene	KNOWN	IFNL3P1	1	3	0.942245
chr19	39243553	39245129	39244341	ENSG00000197110.8	-	protein_coding	KNOWN	IFNL3	2	6	0.942245
chr19	39246314	39248856	39247585	ENSG00000272395.6	-	polymorphic_pseudogene	KNOWN	IFNL4	5	6	0.942245
chr19	39254916	39255269	39255092	ENSG00000213926.3	-	processed_pseudogene	KNOWN	MSRB1P1	1	1	0.687150
chr19	39264382	39265817	39265099	ENSG00000272311.1	+	unprocessed_pseudogene	KNOWN	IFNL4P1	1	5	0.687150
chr19	39268514	39270092	39269303	ENSG00000183709.7	+	protein_coding	KNOWN	IFNL2	1	6	0.695209
chr19	39296325	39298673	39297499	ENSG00000182393.2	+	protein_coding	KNOWN	IFNL1	1	5	0.558458
chr19	39306568	39315336	39310952	ENSG00000128011.4	-	protein_coding	KNOWN	LRFN1	1	2	0.686640
chr19	39314651	39320858	39317754	ENSG00000268262.1	-	sense_overlapping	KNOWN	CTC-246B18.8	1	4	0.769044
chr19	39328353	39342372	39335362	ENSG00000130755.12	-	protein_coding	KNOWN	GMFG	12	7	0.944934
chr19	39341773	39341945	39341859	ENSG00000269246.1	-	lincRNA	KNOWN	CTC-246B18.10	1	1	0.968333
chr19	39342396	39385710	39364053	ENSG00000179134.14	+	protein_coding	KNOWN	SAMD4B	15	16	0.880477
chr19	39369153	39369448	39369300	ENSG00000241983.3	+	misc_RNA	KNOWN	RN7SL566P	1	1	0.665291
chr19	39385852	39391195	39388523	ENSG00000006712.14	-	protein_coding	KNOWN	PAF1	8	14	1.163239
chr19	39391303	39400637	39395970	ENSG00000063322.13	+	protein_coding	KNOWN	MED29	7	4	1.341283
chr19	39406813	39409412	39408112	ENSG00000128016.5	+	protein_coding	KNOWN	ZFP36	4	2	1.341283
chr19	39409623	39409678	39409650	ENSG00000266559.1	-	miRNA	KNOWN	MIR4530	1	1	1.341283
chr19	39412585	39428415	39420500	ENSG00000090924.14	+	protein_coding	KNOWN	PLEKHG2	16	20	1.410068
chr19	39433207	39435948	39434577	ENSG00000105193.8	-	protein_coding	KNOWN	RPS16	8	5	1.295174
chr19	39436156	39476670	39456413	ENSG00000196235.13	+	protein_coding	KNOWN	SUPT5H	20	31	1.221660
chr19	39480412	39493785	39487098	ENSG00000105197.10	+	protein_coding	KNOWN	TIMM50	20	11	0.998460
chr19	39498895	39508481	39503688	ENSG00000090932.10	+	protein_coding	KNOWN	DLL3	5	9	1.100981
chr19	39515113	39520686	39517899	ENSG00000186838.13	+	protein_coding	KNOWN	SELV	5	7	0.901953
chr19	39530990	39532854	39531922	ENSG00000176401.5	-	protein_coding	KNOWN	EID2B	2	2	0.589856
chr19	39532412	39534422	39533417	ENSG00000269792.1	+	antisense	KNOWN	CTB-60E11.9	1	3	0.589856
chr19	39534463	39535021	39534742	ENSG00000269584.1	+	processed_pseudogene	KNOWN	TDGF1P7	1	1	0.589856
chr19	39538250	39540230	39539240	ENSG00000176396.9	-	protein_coding	KNOWN	EID2	1	1	0.589856
chr19	39553034	39555356	39554195	ENSG00000269588.1	+	unprocessed_pseudogene	KNOWN	CTB-60E11.11	1	2	0.530113
chr19	39584042	39586489	39585265	ENSG00000269188.1	+	unprocessed_pseudogene	KNOWN	CTB-60E11.12	1	3	-0.041532
chr19	39588955	39589125	39589040	ENSG00000244253.1	+	processed_pseudogene	KNOWN	RPS29P24	1	1	-0.041532
chr19	39590981	39591151	39591066	ENSG00000243581.1	+	processed_pseudogene	KNOWN	RPS29P25	1	1	0.266388
chr19	39597832	39598002	39597917	ENSG00000239320.1	+	processed_pseudogene	KNOWN	RPS29P26	1	1	0.266388
chr19	39602501	39607476	39604988	ENSG00000105198.10	+	protein_coding	KNOWN	LGALS13	4	5	0.266388
chr19	39631300	39631446	39631373	ENSG00000269519.1	-	processed_pseudogene	KNOWN	AC005176.1	1	1	0.156441
chr19	39638685	39642401	39640543	ENSG00000268153.5	+	transcribed_unprocessed_pseudogene	KNOWN	AC005176.2	3	4	0.156441
chr19	39644502	39644612	39644557	ENSG00000268243.1	+	processed_pseudogene	KNOWN	AC005176.3	1	1	0.156441
chr19	39655894	39660647	39658270	ENSG00000249861.3	+	protein_coding	KNOWN	LGALS16	2	4	0.084458
chr19	39679374	39686373	39682873	ENSG00000226025.9	+	transcribed_unprocessed_pseudogene	KNOWN	LGALS17A	5	8	0.285673
chr19	39685244	39694577	39689910	ENSG00000269460.1	+	lincRNA	KNOWN	AC093063.3	1	2	0.204085
chr19	39693925	39696258	39695091	ENSG00000268088.1	+	transcribed_unprocessed_pseudogene	KNOWN	AC093063.2	1	3	0.119342
chr19	39697904	39698073	39697988	ENSG00000240320.1	+	processed_pseudogene	KNOWN	AC006133.3	1	1	0.119342
chr19	39704306	39709444	39706875	ENSG00000006659.12	+	protein_coding	KNOWN	LGALS14	3	5	0.119342
chr19	39726030	39726775	39726402	ENSG00000278813.1	-	unprocessed_pseudogene	KNOWN	AC006133.7	1	2	0.357582
chr19	39731250	39738028	39734639	ENSG00000105205.6	-	protein_coding	KNOWN	CLC	1	4	0.478460
chr19	39776595	39786135	39781365	ENSG00000213921.6	+	protein_coding	KNOWN	LEUTX	1	3	0.211662
chr19	39812972	39813555	39813263	ENSG00000276445.1	-	lincRNA	KNOWN	LLNLR-268E12.1	1	1	0.265057
chr19	39825350	39834201	39829775	ENSG00000105204.13	-	protein_coding	KNOWN	DYRK1B	8	12	0.570374
chr19	39829716	39829802	39829759	ENSG00000277759.1	-	miRNA	KNOWN	MIR6719	1	1	0.265057
chr19	39834458	39846414	39840436	ENSG00000105202.7	-	protein_coding	KNOWN	FBL	12	9	0.908171
chr19	39863323	39934626	39898974	ENSG00000275395.4	-	protein_coding	KNOWN	FCGBP	3	28	0.679662
chr19	39943239	39943680	39943459	ENSG00000187534.6	-	processed_pseudogene	KNOWN	PRR13P5	1	1	0.735135
chr19	39971005	39981441	39976223	ENSG00000013275.7	+	protein_coding	KNOWN	PSMC4	6	11	0.793707
chr19	39984134	40021041	40002587	ENSG00000187187.13	+	protein_coding	KNOWN	ZNF546	9	7	0.306234
chr19	39991944	39992039	39991991	ENSG00000221233.2	-	miRNA	NOVEL	AC007842.1	1	1	0.328059
chr19	40023384	40025502	40024443	ENSG00000269069.1	-	processed_pseudogene	KNOWN	CTC-471F3.5	1	2	0.007779
chr19	40028260	40056209	40042234	ENSG00000128000.15	-	protein_coding	KNOWN	ZNF780B	7	6	0.322059
chr19	40048757	40090925	40069841	ENSG00000269749.1	-	processed_transcript	KNOWN	AC005614.5	1	7	0.157139
chr19	40069152	40090938	40080045	ENSG00000197782.14	-	protein_coding	KNOWN	ZNF780A	11	9	0.206089
chr19	40090754	40094406	40092580	ENSG00000269296.1	+	antisense	KNOWN	AC005614.3	1	1	0.350453
chr19	40121311	40122168	40121739	ENSG00000230086.1	-	unitary_pseudogene	KNOWN	VN1R96P	1	1	0.670931
chr19	40191744	40215575	40203659	ENSG00000130758.7	+	protein_coding	KNOWN	MAP3K10	8	10	0.867428
chr19	40204112	40204199	40204155	ENSG00000221051.1	+	miRNA	NOVEL	AC118344.1	1	1	0.832749
chr19	40216058	40218399	40217228	ENSG00000174521.7	-	protein_coding	KNOWN	TTC9B	2	3	0.980960
chr19	40222208	40226690	40224449	ENSG00000105219.8	-	protein_coding	KNOWN	CNTD2	5	5	0.980960
chr19	40230317	40285536	40257926	ENSG00000105221.16	-	protein_coding	KNOWN	AKT2	42	14	1.050792
chr19	40273489	40275479	40274484	ENSG00000205041.1	-	sense_intronic	KNOWN	CTC-425O23.2	1	2	0.968003
chr19	40282543	40282641	40282592	ENSG00000207631.1	-	miRNA	KNOWN	MIR641	1	1	0.968003
chr19	40299478	40299584	40299531	ENSG00000206674.1	-	snRNA	KNOWN	RNU6-945P	1	1	0.900566
chr19	40319536	40348527	40334031	ENSG00000160392.13	-	protein_coding	KNOWN	C19orf47	9	9	1.050221
chr19	40339059	40339164	40339111	ENSG00000207281.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.087008
chr19	40342329	40342441	40342385	ENSG00000206925.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.087008
chr19	40348456	40380439	40364447	ENSG00000105223.19	+	protein_coding	KNOWN	PLD3	24	13	1.162203
chr19	40355842	40360606	40358224	ENSG00000279759.1	+	TEC	KNOWN	CTC-425O23.5	1	1	1.193530
chr19	40369846	40369907	40369876	ENSG00000275652.1	+	miRNA	KNOWN	MIR6796	1	1	1.193530
chr19	40379271	40390187	40384729	ENSG00000160396.8	-	protein_coding	KNOWN	HIPK4	1	4	1.113899
chr19	40393768	40413366	40403567	ENSG00000105227.14	-	protein_coding	KNOWN	PRX	3	7	1.147930
chr19	40421592	40426025	40423808	ENSG00000197019.4	-	protein_coding	KNOWN	SERTAD1	1	2	1.147845
chr19	40426115	40426702	40426408	ENSG00000277453.1	+	lincRNA	KNOWN	CTC-492K19.7	1	1	1.147845
chr19	40440844	40444705	40442774	ENSG00000167565.12	-	protein_coding	KNOWN	SERTAD3	5	3	1.012920
chr19	40443436	40444087	40443761	ENSG00000268366.1	+	antisense	KNOWN	CTC-492K19.4	1	2	1.012920
chr19	40447789	40465840	40456814	ENSG00000090013.9	-	protein_coding	KNOWN	BLVRB	4	5	1.078603
chr19	40450225	40450480	40450352	ENSG00000277510.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.087767
chr19	40466241	40576464	40521352	ENSG00000160460.15	+	protein_coding	KNOWN	SPTBN4	14	37	0.846307
chr19	40576851	40591399	40584125	ENSG00000160410.14	+	protein_coding	KNOWN	SHKBP1	28	18	1.016758
chr19	40592883	40629818	40611350	ENSG00000090006.17	+	protein_coding	KNOWN	LTBP4	39	33	1.099324
chr19	40647563	40647937	40647750	ENSG00000279183.1	+	protein_coding	KNOWN	AC010412.1	1	1	1.375385
chr19	40665905	40690972	40678438	ENSG00000105245.9	-	protein_coding	KNOWN	NUMBL	11	10	1.080374
chr19	40691529	40718207	40704868	ENSG00000123815.11	-	protein_coding	KNOWN	ADCK4	17	15	1.081670
chr19	40708055	40708163	40708109	ENSG00000223284.1	-	snRNA	KNOWN	RNU6-195P	1	1	1.095886
chr19	40717103	40740860	40728981	ENSG00000086544.2	+	protein_coding	KNOWN	ITPKC	2	7	1.107706
chr19	40740856	40751553	40746204	ENSG00000188493.14	-	protein_coding	KNOWN	C19orf54	10	9	1.191461
chr19	40750637	40765389	40758013	ENSG00000077312.8	+	protein_coding	KNOWN	SNRPA	11	6	1.278870
chr19	40771648	40777490	40774569	ENSG00000261857.6	+	protein_coding	KNOWN	MIA	7	5	1.217523
chr19	40771648	40786685	40779166	ENSG00000268975.1	+	protein_coding	KNOWN	MIA-RAB4B	1	9	1.217523
chr19	40778216	40796938	40787577	ENSG00000167578.17	+	protein_coding	KNOWN	RAB4B	8	8	1.186275
chr19	40778242	40808198	40793220	ENSG00000171570.10	+	protein_coding	KNOWN	RAB4B-EGLN2	3	12	1.166303
chr19	40779780	40796943	40788361	ENSG00000282951.1	-	antisense	KNOWN	CTC-490E21.14	1	3	1.183412
chr19	40798996	40808433	40803714	ENSG00000269858.5	+	protein_coding	KNOWN	EGLN2	18	6	1.133214
chr19	40801297	40898282	40849789	ENSG00000268797.1	+	protein_coding	KNOWN	CTC-490E21.12	1	4	0.859341
chr19	40808525	40811390	40809957	ENSG00000233622.1	-	unitary_pseudogene	KNOWN	CYP2T1P	1	8	1.218759
chr19	40818721	40826772	40822746	ENSG00000237118.2	-	unitary_pseudogene	KNOWN	CYP2F2P	1	6	1.309409
chr19	40831221	40837210	40834215	ENSG00000269843.1	-	lincRNA	KNOWN	CTC-490E21.10	1	2	0.930528
chr19	40840159	40842039	40841099	ENSG00000279108.1	+	TEC	KNOWN	CTC-490E21.11	1	1	0.930528
chr19	40843538	40882210	40862874	ENSG00000255974.6	-	protein_coding	KNOWN	CYP2A6	5	10	0.677539
chr19	40875439	40882752	40879095	ENSG00000198077.10	-	protein_coding	KNOWN	CYP2A7	5	9	0.507029
chr19	40890826	40900508	40895667	ENSG00000130612.14	+	transcribed_unprocessed_pseudogene	KNOWN	CYP2G1P	2	6	0.548630
chr19	40908480	40910685	40909582	ENSG00000198251.7	-	unprocessed_pseudogene	KNOWN	CTC-490E21.13	1	4	0.514479
chr19	40924219	40950660	40937439	ENSG00000256612.7	+	transcribed_unprocessed_pseudogene	KNOWN	CYP2B7P	6	9	0.474843
chr19	40946347	40947450	40946898	ENSG00000269353.1	+	sense_intronic	KNOWN	AC092071.1	1	2	0.484693
chr19	40991299	41018398	41004848	ENSG00000197408.8	+	protein_coding	KNOWN	CYP2B6	5	9	0.295156
chr19	41024268	41027720	41025994	ENSG00000213908.4	-	unprocessed_pseudogene	KNOWN	CYP2A7P1	1	5	0.259636
chr19	41050449	41062444	41056446	ENSG00000268101.2	-	unprocessed_pseudogene	KNOWN	CYP2G2P	1	9	0.176654
chr19	41073804	41074107	41073955	ENSG00000271299.1	-	processed_pseudogene	KNOWN	CTD-2356P16.6	1	1	0.292290
chr19	41088472	41096195	41092333	ENSG00000197838.4	+	protein_coding	KNOWN	CYP2A13	1	9	0.389871
chr19	41114432	41128366	41121399	ENSG00000197446.8	+	protein_coding	KNOWN	CYP2F1	6	10	0.493465
chr19	41134722	41137308	41136015	ENSG00000268529.1	+	unprocessed_pseudogene	KNOWN	CYP2T3P	1	7	0.601005
chr19	41169861	41170166	41170013	ENSG00000224476.3	+	processed_pseudogene	KNOWN	RPL36P16	1	1	0.744400
chr19	41190927	41191229	41191078	ENSG00000264423.2	-	misc_RNA	KNOWN	RN7SL718P	1	1	0.923767
chr19	41193049	41207539	41200294	ENSG00000167600.13	+	protein_coding	KNOWN	CYP2S1	6	9	0.923767
chr19	41219203	41261766	41240484	ENSG00000167601.11	+	protein_coding	KNOWN	AXL	5	20	1.166011
chr19	41221426	41222051	41221738	ENSG00000269652.1	-	antisense	KNOWN	CTD-2195B23.3	1	2	1.228531
chr19	41262496	41307598	41285047	ENSG00000105323.16	+	protein_coding	KNOWN	HNRNPUL1	22	15	0.956390
chr19	41286424	41286693	41286558	ENSG00000239868.3	-	misc_RNA	KNOWN	RN7SL34P	1	1	1.132864
chr19	41301587	41353911	41327749	ENSG00000105329.9	-	protein_coding	KNOWN	TGFB1	4	7	1.096823
chr19	41310189	41324883	41317536	ENSG00000142039.3	+	protein_coding	KNOWN	CCDC97	3	5	1.247446
chr19	41350853	41425001	41387927	ENSG00000255730.5	+	protein_coding	KNOWN	CTC-435M10.3	2	10	1.075253
chr19	41350911	41384083	41367497	ENSG00000142046.14	+	protein_coding	KNOWN	TMEM91	14	4	1.113847
chr19	41354421	41364173	41359297	ENSG00000123810.7	-	protein_coding	KNOWN	B9D2	3	5	1.162842
chr19	41373971	41374419	41374195	ENSG00000277744.1	+	sense_intronic	KNOWN	CTC-435M10.12	1	1	1.047445
chr19	41386374	41397479	41391926	ENSG00000077348.8	-	protein_coding	KNOWN	EXOSC5	5	6	1.083394
chr19	41397460	41431345	41414402	ENSG00000248098.10	+	protein_coding	KNOWN	BCKDHA	9	9	1.026662
chr19	41399372	41400365	41399868	ENSG00000268987.1	+	sense_intronic	KNOWN	CTC-435M10.10	1	2	1.100816
chr19	41425359	41428730	41427044	ENSG00000177191.2	-	protein_coding	KNOWN	B3GNT8	3	3	0.966461
chr19	41425359	41426237	41425798	ENSG00000268475.1	+	antisense	KNOWN	CTC-435M10.6	1	2	0.966461
chr19	41431318	41440717	41436017	ENSG00000105341.18	-	protein_coding	KNOWN	ATP5SL	16	6	1.230375
chr19	41442102	41442392	41442247	ENSG00000277136.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.230375
chr19	41443158	41444765	41443961	ENSG00000204978.2	+	protein_coding	KNOWN	ERICH4	1	2	1.230375
chr19	41454169	41500649	41477409	ENSG00000267107.6	-	lincRNA	KNOWN	PCAT19	7	4	0.462546
chr19	41506152	41506898	41506525	ENSG00000268034.1	+	processed_pseudogene	KNOWN	AC005795.1	1	1	0.513343
chr19	41521043	41521989	41521516	ENSG00000269800.1	-	processed_pseudogene	KNOWN	PLEKHA3P1	1	2	0.272564
chr19	41531206	41532174	41531690	ENSG00000268355.1	+	lincRNA	KNOWN	AC006129.1	2	2	0.165241
chr19	41535183	41536904	41536043	ENSG00000270164.1	+	lincRNA	KNOWN	LINC01480	4	3	0.165241
chr19	41545192	41555462	41550327	ENSG00000268027.5	+	lincRNA	KNOWN	AC006129.2	3	7	0.130222
chr19	41549518	41586844	41568181	ENSG00000007129.17	+	protein_coding	KNOWN	CEACAM21	7	8	0.328706
chr19	41551568	41552274	41551921	ENSG00000280014.1	-	TEC	KNOWN	AC006129.3	1	1	0.099409
chr19	41599735	41605984	41602859	ENSG00000239736.2	+	transcribed_unprocessed_pseudogene	KNOWN	CEACAMP3	2	3	0.594492
chr19	41605341	41605671	41605506	ENSG00000269266.1	-	processed_pseudogene	KNOWN	DNAJC19P2	1	2	0.594492
chr19	41618971	41627074	41623022	ENSG00000105352.10	-	protein_coding	KNOWN	CEACAM4	3	7	0.589491
chr19	41638569	41638899	41638734	ENSG00000268997.1	-	processed_pseudogene	KNOWN	DNAJC19P3	1	1	0.241628
chr19	41639659	41640602	41640130	ENSG00000269354.1	-	processed_pseudogene	KNOWN	AC005626.3	1	2	0.241628
chr19	41652676	41652963	41652819	ENSG00000268582.1	+	processed_pseudogene	KNOWN	AC005794.1	1	1	0.629426
chr19	41673307	41706976	41690141	ENSG00000007306.14	-	protein_coding	KNOWN	CEACAM7	4	5	0.291984
chr19	41708585	41729798	41719191	ENSG00000105388.15	+	protein_coding	KNOWN	CEACAM5	10	10	0.722889
chr19	41708612	41761282	41734947	ENSG00000267881.1	+	protein_coding	KNOWN	AC011513.3	2	3	0.357076
chr19	41750977	41772208	41761592	ENSG00000086548.8	+	protein_coding	KNOWN	CEACAM6	2	6	0.340459
chr19	41757898	41786893	41772395	ENSG00000268833.1	-	antisense	KNOWN	AC011513.4	1	2	0.384453
chr19	41796437	41811553	41803995	ENSG00000170956.16	+	protein_coding	KNOWN	CEACAM3	8	8	0.337536
chr19	41829692	41830938	41830315	ENSG00000269119.1	+	processed_pseudogene	KNOWN	HNRNPA1P52	1	2	0.345417
chr19	41833686	41835950	41834818	ENSG00000278239.1	-	lincRNA	KNOWN	AC020956.3	1	1	0.211662
chr19	41837074	41844697	41840885	ENSG00000273111.5	-	protein_coding	KNOWN	LYPD4	3	6	0.211662
chr19	41844743	41852333	41848538	ENSG00000142025.15	+	protein_coding	KNOWN	DMRTC2	8	9	0.386355
chr19	41859918	41872926	41866422	ENSG00000105372.6	+	protein_coding	KNOWN	RPS19	8	6	0.826099
chr19	41869627	41869698	41869662	ENSG00000276926.1	+	miRNA	KNOWN	MIR6797	1	1	0.779750
chr19	41877120	41881372	41879246	ENSG00000105369.9	+	protein_coding	KNOWN	CD79A	3	5	0.985733
chr19	41883161	41930150	41906655	ENSG00000076928.17	+	protein_coding	KNOWN	ARHGEF1	23	30	1.406923
chr19	41908519	41910097	41909308	ENSG00000268041.1	-	transcribed_unprocessed_pseudogene	KNOWN	CTD-2575K13.6	2	4	1.430742
chr19	41956681	41959390	41958035	ENSG00000105404.10	-	protein_coding	KNOWN	RABAC1	10	5	1.322946
chr19	41966582	41997497	41982039	ENSG00000105409.15	-	protein_coding	KNOWN	ATP1A3	9	23	1.032016
chr19	41998321	42069498	42033909	ENSG00000105737.9	-	protein_coding	KNOWN	GRIK5	6	20	0.963553
chr19	42068477	42081565	42075021	ENSG00000105732.11	+	protein_coding	KNOWN	ZNF574	5	4	1.076426
chr19	42086110	42196585	42141347	ENSG00000028277.20	-	protein_coding	KNOWN	POU2F2	19	16	1.099652
chr19	42132555	42137099	42134827	ENSG00000254887.1	+	processed_transcript	KNOWN	CTC-378H22.1	2	3	1.214939
chr19	42133445	42133513	42133479	ENSG00000266226.1	-	miRNA	KNOWN	MIR4323	1	1	1.214939
chr19	42152569	42157523	42155046	ENSG00000259436.1	+	antisense	KNOWN	CTC-378H22.2	1	2	1.203637
chr19	42198598	42220140	42209369	ENSG00000160570.13	-	protein_coding	KNOWN	DEDD2	13	6	1.050972
chr19	42220271	42228201	42224236	ENSG00000167625.10	+	protein_coding	KNOWN	ZNF526	2	3	1.066457
chr19	42230186	42242625	42236405	ENSG00000105723.11	-	protein_coding	KNOWN	GSK3A	4	12	1.105454
chr19	42234583	42255132	42244857	ENSG00000268643.1	-	protein_coding	KNOWN	AC006486.9	1	5	1.197629
chr19	42242775	42244973	42243874	ENSG00000279539.1	+	TEC	KNOWN	AC006486.10	1	1	1.105454
chr19	42247572	42255157	42251364	ENSG00000105722.9	-	protein_coding	KNOWN	ERF	7	4	1.356388
chr19	42268537	42295797	42282167	ENSG00000079432.7	+	protein_coding	KNOWN	CIC	9	21	1.402314
chr19	42297033	42303546	42300289	ENSG00000079462.7	-	protein_coding	KNOWN	PAFAH1B3	8	6	1.520553
chr19	42302098	42310821	42306459	ENSG00000188368.9	+	protein_coding	KNOWN	PRR19	4	3	1.506680
chr19	42313325	42325062	42319193	ENSG00000167619.11	+	protein_coding	KNOWN	TMEM145	5	15	1.373338
chr19	42325609	42378769	42352189	ENSG00000105429.12	+	protein_coding	KNOWN	MEGF8	7	42	1.284515
chr19	42351131	42351205	42351168	ENSG00000277533.1	+	miRNA	KNOWN	MIR8077	1	1	1.242326
chr19	42387019	42390287	42388653	ENSG00000105427.9	-	protein_coding	KNOWN	CNFN	2	5	1.144082
chr19	42397128	42652355	42524741	ENSG00000213904.8	+	antisense	KNOWN	LIPE-AS1	8	5	0.626067
chr19	42401507	42427426	42414466	ENSG00000079435.9	-	protein_coding	KNOWN	LIPE	9	10	0.999764
chr19	42424384	42425071	42424727	ENSG00000268605.1	-	sense_intronic	KNOWN	CTB-50E14.4	1	2	0.911143
chr19	42428288	42443048	42435668	ENSG00000189377.8	-	protein_coding	KNOWN	CXCL17	2	4	0.907982
chr19	42472875	42473009	42472942	ENSG00000253048.1	+	snRNA	KNOWN	RNU4-60P	1	1	0.663149
chr19	42485076	42485714	42485395	ENSG00000269374.1	-	processed_pseudogene	KNOWN	CTB-50E14.5	1	1	0.663149
chr19	42507304	42561234	42534269	ENSG00000079385.21	-	protein_coding	KNOWN	CEACAM1	14	9	0.666417
chr19	42560433	42561750	42561091	ENSG00000230558.2	-	unprocessed_pseudogene	KNOWN	CEACAMP2	1	2	0.540818
chr19	42580241	42740384	42660312	ENSG00000124469.10	-	protein_coding	KNOWN	CEACAM8	3	6	0.429149
chr19	42620212	42633034	42626623	ENSG00000233681.1	-	unprocessed_pseudogene	KNOWN	CEACAMP1	1	5	0.342439
chr19	42654200	42669076	42661638	ENSG00000231561.2	+	unprocessed_pseudogene	KNOWN	CEACAMP5	1	5	0.409474
chr19	42670005	42670816	42670410	ENSG00000243167.1	+	processed_pseudogene	KNOWN	RPS10P28	1	2	0.365276
chr19	42673581	42673680	42673630	ENSG00000277756.1	-	miRNA	NOVEL	AC005204.1	1	1	0.365276
chr19	42721638	42740569	42731103	ENSG00000221826.9	-	protein_coding	KNOWN	PSG3	6	8	0.529857
chr19	42752686	42855691	42804188	ENSG00000124467.18	-	protein_coding	KNOWN	PSG8	9	6	0.485887
chr19	42781206	42786595	42783900	ENSG00000238092.1	-	unprocessed_pseudogene	KNOWN	CEACAMP6	1	3	0.521036
chr19	42821863	42826878	42824370	ENSG00000225877.1	+	lincRNA	KNOWN	AC004603.4	1	4	0.390587
chr19	42839368	42855718	42847543	ENSG00000248257.7	-	transcribed_unprocessed_pseudogene	KNOWN	PSG10P	2	6	0.634133
chr19	42866464	42879822	42873143	ENSG00000231924.9	-	protein_coding	KNOWN	PSG1	11	6	0.721965
chr19	42902079	42919563	42910821	ENSG00000170848.15	-	protein_coding	KNOWN	PSG6	9	6	0.666651
chr19	42906822	43082671	42994746	ENSG00000221878.10	-	protein_coding	KNOWN	PSG7	8	6	0.591050
chr19	42949503	42950387	42949945	ENSG00000227349.1	-	unprocessed_pseudogene	KNOWN	CEACAMP7	1	2	0.731733
chr19	42977463	43171515	43074489	ENSG00000282943.1	+	antisense	KNOWN	CTC-490G23.6	2	3	0.669757
chr19	43007656	43026512	43017084	ENSG00000243130.7	-	protein_coding	KNOWN	PSG11	13	8	0.511232
chr19	43035869	43041248	43038558	ENSG00000236932.2	-	unprocessed_pseudogene	KNOWN	CEACAMP8	1	3	0.543163
chr19	43064211	43083045	43073628	ENSG00000242221.8	-	protein_coding	KNOWN	PSG2	4	6	0.811743
chr19	43096456	43097360	43096908	ENSG00000230529.1	-	unprocessed_pseudogene	KNOWN	CEACAMP9	1	2	0.714625
chr19	43153279	43160862	43157070	ENSG00000227606.2	+	lincRNA	KNOWN	AC005392.13	1	3	0.929610
chr19	43166256	43186536	43176396	ENSG00000204941.13	-	protein_coding	KNOWN	PSG5	11	7	0.373321
chr19	43192702	43207299	43200000	ENSG00000243137.7	-	protein_coding	KNOWN	PSG4	17	6	0.899347
chr19	43211791	43269530	43240660	ENSG00000183668.17	-	protein_coding	KNOWN	PSG9	9	6	0.041941
chr19	43211791	43248646	43230218	ENSG00000241104.5	-	transcribed_processed_pseudogene	KNOWN	CEACAMP10	2	9	0.098959
chr19	43278933	43284318	43281625	ENSG00000236123.1	-	unprocessed_pseudogene	KNOWN	CEACAMP11	1	3	0.704969
chr19	43303171	43304523	43303847	ENSG00000230681.1	-	unprocessed_pseudogene	KNOWN	CEACAMP4	1	2	0.378613
chr19	43329295	43331430	43330362	ENSG00000231412.2	-	lincRNA	KNOWN	CTC-490G23.2	1	2	0.523811
chr19	43353659	43363172	43358415	ENSG00000204936.9	+	protein_coding	KNOWN	CD177	3	9	0.802096
chr19	43360685	43368970	43364827	ENSG00000272396.1	-	antisense	KNOWN	CTC-490G23.4	1	3	0.802096
chr19	43372742	43379123	43375932	ENSG00000204933.3	-	unprocessed_pseudogene	KNOWN	CD177P1	1	6	0.953712
chr19	43401496	43418597	43410046	ENSG00000131126.18	+	protein_coding	KNOWN	TEX101	3	8	0.612968
chr19	43460787	43465660	43463223	ENSG00000124466.8	-	protein_coding	KNOWN	LYPD3	4	5	0.892851
chr19	43474954	43504935	43489944	ENSG00000176531.10	-	protein_coding	KNOWN	PHLDB3	9	16	1.099234
chr19	43506719	43527244	43516981	ENSG00000105755.7	-	protein_coding	KNOWN	ETHE1	6	7	1.063554
chr19	43525497	43536130	43530813	ENSG00000176472.10	+	protein_coding	KNOWN	ZNF575	5	5	0.943272
chr19	43543040	43580473	43561756	ENSG00000073050.11	-	protein_coding	KNOWN	XRCC1	9	17	0.853876
chr19	43553445	43555494	43554469	ENSG00000269177.1	+	antisense	KNOWN	L34079.3	1	2	0.860484
chr19	43554692	43593036	43573864	ENSG00000268361.1	-	protein_coding	KNOWN	L34079.2	1	3	0.860888
chr19	43574638	43575618	43575128	ENSG00000269583.1	+	antisense	KNOWN	L34079.4	1	2	0.827345
chr19	43576800	43583964	43580382	ENSG00000234465.10	+	protein_coding	KNOWN	PINLYP	7	6	0.827345
chr19	43584369	43596135	43590252	ENSG00000167378.8	-	protein_coding	KNOWN	IRGQ	5	3	0.961096
chr19	43596392	43601157	43598774	ENSG00000124444.15	+	protein_coding	KNOWN	ZNF576	7	3	1.083818
chr19	43596617	43614497	43605557	ENSG00000226763.4	+	protein_coding	KNOWN	SRRM5	2	3	1.008361
chr19	43607219	43619874	43613546	ENSG00000131116.11	-	protein_coding	KNOWN	ZNF428	3	4	0.849761
chr19	43622368	43639839	43631103	ENSG00000105767.2	-	protein_coding	KNOWN	CADM4	2	9	0.991002
chr19	43646095	43670547	43658321	ENSG00000011422.11	-	protein_coding	KNOWN	PLAUR	16	7	0.728775
chr19	43660500	43660776	43660638	ENSG00000239948.2	-	misc_RNA	KNOWN	RN7SL368P	1	1	0.635614
chr19	43716010	43720021	43718015	ENSG00000124449.6	+	protein_coding	KNOWN	IRGC	2	2	0.909615
chr19	43727992	43754990	43741491	ENSG00000105771.13	-	protein_coding	KNOWN	SMG9	13	14	0.997107
chr19	43766533	43781257	43773895	ENSG00000104783.11	-	protein_coding	KNOWN	KCNN4	9	10	1.217683
chr19	43794309	43795658	43794983	ENSG00000268601.1	-	lincRNA	KNOWN	AC115522.3	1	2	0.800652
chr19	43795929	43827206	43811567	ENSG00000159871.14	-	protein_coding	KNOWN	LYPD5	8	5	0.661208
chr19	43827292	43852017	43839654	ENSG00000167637.16	+	protein_coding	KNOWN	ZNF283	9	7	0.310205
chr19	43872363	43901385	43886874	ENSG00000176222.8	-	protein_coding	KNOWN	ZNF404	3	4	0.128342
chr19	43891233	43895411	43893322	ENSG00000278917.1	+	TEC	KNOWN	RP11-15A1.4	1	1	0.129467
chr19	43891804	43901805	43896804	ENSG00000267058.1	-	lincRNA	KNOWN	RP11-15A1.3	2	3	0.129467
chr19	43902001	43926545	43914273	ENSG00000267191.1	+	antisense	KNOWN	RP11-15A1.2	1	3	0.099328
chr19	43912629	43935278	43923953	ENSG00000124459.11	-	protein_coding	KNOWN	ZNF45	6	10	0.144129
chr19	43951223	43967709	43959466	ENSG00000159905.14	+	protein_coding	KNOWN	ZNF221	5	6	0.349150
chr19	43967862	43998325	43983093	ENSG00000204920.10	+	protein_coding	KNOWN	ZNF155	9	6	0.308127
chr19	43976815	43977448	43977131	ENSG00000277806.1	+	sense_intronic	KNOWN	RP11-15A1.8	1	1	0.239669
chr19	43978376	43978663	43978519	ENSG00000278492.1	+	sense_intronic	KNOWN	RP11-15A1.9	1	1	0.239669
chr19	43996896	44002836	43999866	ENSG00000266921.1	-	antisense	KNOWN	RP11-15A1.7	2	3	0.462042
chr19	44002948	44013926	44008437	ENSG00000159882.12	+	protein_coding	KNOWN	ZNF230	5	5	0.402771
chr19	44023604	44025262	44024433	ENSG00000267144.1	-	lincRNA	KNOWN	AC067968.3	1	3	0.296350
chr19	44025342	44033112	44029227	ENSG00000159885.13	+	protein_coding	KNOWN	ZNF222	4	5	0.310144
chr19	44025354	44087318	44056336	ENSG00000267022.1	+	protein_coding	KNOWN	AC084219.2	1	11	0.438660
chr19	44051367	44067991	44059679	ENSG00000178386.12	+	protein_coding	KNOWN	ZNF223	5	6	0.603891
chr19	44072144	44089613	44080878	ENSG00000186026.6	+	protein_coding	KNOWN	ZNF284	1	5	0.410600
chr19	44085213	44085303	44085258	ENSG00000253021.1	-	snRNA	KNOWN	RNU6-902P	1	1	0.410600
chr19	44094339	44109886	44102112	ENSG00000267680.5	+	protein_coding	KNOWN	ZNF224	8	6	0.522069
chr19	44105463	44113145	44109304	ENSG00000186019.10	-	antisense	KNOWN	AC084219.4	2	2	0.500951
chr19	44112181	44134816	44123498	ENSG00000256294.7	+	protein_coding	KNOWN	ZNF225	6	6	0.397968
chr19	44141557	44160309	44150933	ENSG00000263002.7	+	protein_coding	KNOWN	ZNF234	4	6	0.235500
chr19	44165073	44178381	44171727	ENSG00000167380.16	+	protein_coding	KNOWN	ZNF226	19	7	0.204452
chr19	44207547	44237268	44222407	ENSG00000131115.15	+	protein_coding	KNOWN	ZNF227	13	6	0.308674
chr19	44228729	44305046	44266887	ENSG00000159917.14	-	protein_coding	KNOWN	ZNF235	7	5	0.233627
chr19	44246478	44248374	44247426	ENSG00000279103.1	-	TEC	KNOWN	CTC-204F22.1	1	1	0.455539
chr19	44259880	44275317	44267598	ENSG00000159915.12	+	protein_coding	KNOWN	ZNF233	5	5	0.100253
chr19	44290081	44290911	44290496	ENSG00000270679.1	+	processed_pseudogene	KNOWN	CTC-512J12.7	1	2	0.267563
chr19	44297104	44297355	44297229	ENSG00000267590.1	+	processed_pseudogene	KNOWN	NDUFA3P1	1	1	0.267563
chr19	44326555	44367217	44346886	ENSG00000062370.16	-	protein_coding	KNOWN	ZNF112	6	5	0.283645
chr19	44329695	44401608	44365651	ENSG00000267173.1	-	protein_coding	KNOWN	CTC-512J12.6	1	5	0.200787
chr19	44382298	44401608	44391953	ENSG00000267508.5	-	protein_coding	KNOWN	ZNF285	6	5	0.116742
chr19	44392439	44448452	44420445	ENSG00000267188.1	-	processed_transcript	KNOWN	CTC-512J12.4	1	6	0.275621
chr19	44417519	44448578	44433048	ENSG00000278318.4	-	protein_coding	KNOWN	ZNF229	5	6	0.349934
chr19	44467641	44473227	44470434	ENSG00000176761.7	+	unprocessed_pseudogene	KNOWN	ZNF285B	1	2	0.203162
chr19	44474428	44500524	44487476	ENSG00000167384.10	-	protein_coding	KNOWN	ZNF180	11	7	0.235721
chr19	44501677	44529788	44515732	ENSG00000273777.4	-	protein_coding	KNOWN	CEACAM20	6	12	0.301634
chr19	44536263	44536613	44536438	ENSG00000267614.1	-	lincRNA	KNOWN	AC138472.6	1	2	0.700413
chr19	44537058	44620821	44578939	ENSG00000230666.5	-	transcribed_unprocessed_pseudogene	KNOWN	CEACAM22P	3	8	0.474835
chr19	44570304	44570564	44570434	ENSG00000224366.1	-	unprocessed_pseudogene	KNOWN	AC138472.4	1	1	0.487577
chr19	44613630	44636781	44625205	ENSG00000216588.8	+	protein_coding	KNOWN	IGSF23	4	6	0.816742
chr19	44632199	44718759	44675479	ENSG00000266903.1	-	antisense	KNOWN	CTB-171A8.1	3	4	0.978276
chr19	44643798	44663583	44653690	ENSG00000073008.14	+	protein_coding	KNOWN	PVR	6	8	1.084182
chr19	44662278	44684359	44673318	ENSG00000186567.12	+	protein_coding	KNOWN	CEACAM19	9	8	0.915646
chr19	44664131	44666158	44665144	ENSG00000279095.1	+	TEC	KNOWN	AC092066.1	1	1	1.091992
chr19	44699151	44710714	44704932	ENSG00000213892.10	+	protein_coding	KNOWN	CEACAM16	2	7	0.965149
chr19	44725984	44726058	44726021	ENSG00000252200.1	-	snoRNA	NOVEL	snoZ6	1	1	0.921006
chr19	44747705	44760044	44753874	ENSG00000069399.12	+	protein_coding	KNOWN	BCL3	9	9	1.372973
chr19	44758657	44758721	44758689	ENSG00000277736.1	+	miRNA	KNOWN	MIR8085	1	1	1.501868
chr19	44764950	44765100	44765025	ENSG00000253027.1	+	snoRNA	NOVEL	SNORA70	1	1	1.501868
chr19	44765148	44765464	44765306	ENSG00000236807.1	+	processed_pseudogene	KNOWN	AC092066.6	1	1	1.501868
chr19	44777869	44800634	44789251	ENSG00000142273.10	+	protein_coding	KNOWN	CBLC	2	11	0.966796
chr19	44809059	44821420	44815239	ENSG00000187244.10	+	protein_coding	KNOWN	BCAM	11	15	1.074707
chr19	44846175	44889228	44867701	ENSG00000130202.9	+	protein_coding	KNOWN	PVRL2	6	9	0.988630
chr19	44882027	44890876	44886451	ENSG00000267282.1	-	antisense	KNOWN	CTB-129P6.4	1	2	0.961256
chr19	44890569	44903689	44897129	ENSG00000130204.12	+	protein_coding	KNOWN	TOMM40	7	10	1.180017
chr19	44905754	44909393	44907573	ENSG00000130203.9	+	protein_coding	KNOWN	APOE	5	4	1.180017
chr19	44909375	44914968	44912171	ENSG00000280087.1	+	TEC	KNOWN	CTB-129P6.7	1	1	1.118351
chr19	44914247	44919349	44916798	ENSG00000130208.9	+	protein_coding	KNOWN	APOC1	9	5	1.110607
chr19	44926804	44931386	44929095	ENSG00000214855.9	+	transcribed_unprocessed_pseudogene	KNOWN	APOC1P1	5	4	1.160244
chr19	44942238	44945496	44943867	ENSG00000267467.3	+	protein_coding	KNOWN	APOC4	2	3	1.274583
chr19	44942238	44949565	44945901	ENSG00000224916.8	+	protein_coding	KNOWN	APOC4-APOC2	3	6	1.274583
chr19	44946035	44949565	44947800	ENSG00000234906.8	+	protein_coding	KNOWN	APOC2	4	4	1.274583
chr19	44950044	44954007	44952025	ENSG00000267114.1	-	lincRNA	KNOWN	CTB-129P6.11	1	3	0.877253
chr19	44954585	44993341	44973963	ENSG00000104853.15	+	protein_coding	KNOWN	CLPTM1	12	14	1.078917
chr19	45001430	45038198	45019814	ENSG00000104856.13	+	protein_coding	KNOWN	RELB	7	12	1.217464
chr19	45039040	45070956	45054998	ENSG00000104859.14	+	protein_coding	KNOWN	CLASRP	16	21	1.051453
chr19	45047458	45047561	45047509	ENSG00000207003.1	+	snRNA	KNOWN	RNU6-611P	1	1	1.297106
chr19	45071500	45076588	45074044	ENSG00000170684.8	-	protein_coding	KNOWN	ZNF296	2	4	1.553504
chr19	45076510	45090391	45083450	ENSG00000267348.2	-	antisense	KNOWN	CTB-179K24.3	2	2	1.537228
chr19	45079195	45091524	45085359	ENSG00000142252.10	+	protein_coding	KNOWN	GEMIN7	5	3	1.482216
chr19	45079288	45305283	45192285	ENSG00000007047.14	+	protein_coding	KNOWN	MARK4	11	18	1.055407
chr19	45091396	45148077	45119736	ENSG00000104866.10	+	protein_coding	KNOWN	PPP1R37	9	13	1.021276
chr19	45128569	45129030	45128799	ENSG00000267346.1	+	processed_pseudogene	KNOWN	EIF5AP3	1	1	0.920225
chr19	45135993	45136977	45136485	ENSG00000267044.1	-	antisense	KNOWN	AC005757.6	1	2	1.178456
chr19	45149750	45160150	45154950	ENSG00000179846.8	-	protein_coding	KNOWN	NKPD1	3	4	1.256188
chr19	45149750	45150605	45150177	ENSG00000267037.1	-	lincRNA	KNOWN	AC005757.7	1	1	1.234902
chr19	45162928	45178237	45170582	ENSG00000007255.10	-	protein_coding	KNOWN	TRAPPC6A	5	6	1.310255
chr19	45178745	45181801	45180273	ENSG00000189114.6	+	protein_coding	KNOWN	BLOC1S3	4	3	1.355026
chr19	45179822	45202444	45191133	ENSG00000267545.1	+	protein_coding	KNOWN	AC005779.2	1	5	1.116544
chr19	45187388	45216933	45202160	ENSG00000266958.1	+	antisense	KNOWN	AC006126.3	1	4	0.968093
chr19	45212621	45234211	45223416	ENSG00000130201.7	-	protein_coding	KNOWN	EXOC3L2	2	10	0.943028
chr19	45238632	45245370	45242001	ENSG00000267045.1	-	lincRNA	KNOWN	AC006126.4	1	2	0.886568
chr19	45306414	45322977	45314695	ENSG00000104879.4	-	protein_coding	KNOWN	CKM	1	8	1.167454
chr19	45332698	45333124	45332911	ENSG00000242675.1	-	processed_pseudogene	KNOWN	RPS16P9	1	1	1.257457
chr19	45333434	45351520	45342477	ENSG00000104892.16	+	protein_coding	KNOWN	KLC3	7	13	1.256743
chr19	45349837	45370918	45360377	ENSG00000104884.14	-	protein_coding	KNOWN	ERCC2	12	23	1.248178
chr19	45377222	45377322	45377272	ENSG00000275943.1	-	miRNA	NOVEL	AC092309.1	1	1	1.229495
chr19	45379634	45406349	45392991	ENSG00000104881.14	-	protein_coding	KNOWN	PPP1R13L	10	13	1.157777
chr19	45406209	45410766	45408487	ENSG00000117877.10	+	protein_coding	KNOWN	CD3EAP	4	3	1.159693
chr19	45407333	45478828	45443080	ENSG00000012061.15	-	protein_coding	KNOWN	ERCC1	17	10	1.178669
chr19	45436654	45436704	45436679	ENSG00000275726.1	+	miRNA	KNOWN	MIR6088	1	1	1.065840
chr19	45467995	45475179	45471587	ENSG00000125740.13	+	protein_coding	KNOWN	FOSB	13	5	1.162892
chr19	45485289	45497061	45491175	ENSG00000125744.11	-	protein_coding	KNOWN	RTN2	14	11	1.299830
chr19	45488777	45502510	45495643	ENSG00000213889.10	+	protein_coding	KNOWN	PPM1N	8	5	1.353733
chr19	45506579	45526983	45516781	ENSG00000125753.13	+	protein_coding	KNOWN	VASP	11	13	1.279891
chr19	45527427	45602212	45564819	ENSG00000125741.4	-	protein_coding	KNOWN	OPA3	3	2	0.981841
chr19	45589764	45602208	45595986	ENSG00000177464.4	-	protein_coding	KNOWN	GPR4	2	2	1.096401
chr19	45606994	45645629	45626311	ENSG00000125746.14	-	protein_coding	KNOWN	EML2	31	22	1.351203
chr19	45638994	45639087	45639040	ENSG00000199066.1	-	miRNA	KNOWN	MIR330	1	1	1.489751
chr19	45641494	45642840	45642167	ENSG00000267757.4	+	processed_transcript	KNOWN	EML2-AS1	3	3	1.489751
chr19	45651510	45651805	45651657	ENSG00000241226.3	+	misc_RNA	KNOWN	RN7SL836P	1	1	1.063178
chr19	45668244	45683724	45675984	ENSG00000010310.8	+	protein_coding	KNOWN	GIPR	8	14	1.104420
chr19	45674928	45675024	45674976	ENSG00000207773.1	+	miRNA	KNOWN	MIR642A	1	1	1.109694
chr19	45687454	45692569	45690011	ENSG00000125743.10	-	protein_coding	KNOWN	SNRPD2	8	4	1.096255
chr19	45692483	45703989	45698236	ENSG00000011478.11	+	protein_coding	KNOWN	QPCTL	4	7	1.082947
chr19	45710629	45730904	45720766	ENSG00000177051.5	-	protein_coding	KNOWN	FBXO46	3	2	0.952047
chr19	45714387	45717381	45715884	ENSG00000279407.1	-	TEC	KNOWN	AC007191.4	1	1	0.944838
chr19	45733251	45764534	45748892	ENSG00000237452.2	+	protein_coding	KNOWN	BHMG1	1	15	1.064389
chr19	45764785	45769226	45767005	ENSG00000177045.7	-	protein_coding	KNOWN	SIX5	4	3	1.016043
chr19	45764785	45769806	45767295	ENSG00000259605.3	+	processed_transcript	KNOWN	AC074212.5	2	2	1.016043
chr19	45767796	45772504	45770150	ENSG00000267395.5	+	antisense	KNOWN	AC074212.6	4	3	1.267865
chr19	45769717	45782552	45776134	ENSG00000104936.17	-	protein_coding	KNOWN	DMPK	20	16	1.478928
chr19	45779437	45785973	45782705	ENSG00000268434.5	-	protein_coding	KNOWN	AC011530.4	4	5	1.489327
chr19	45782947	45792802	45787874	ENSG00000185800.11	-	protein_coding	KNOWN	DMWD	8	5	1.486813
chr19	45795710	45815319	45805514	ENSG00000104941.7	-	protein_coding	KNOWN	RSPH6A	3	6	1.404662
chr19	45815410	45863290	45839350	ENSG00000125755.18	-	protein_coding	KNOWN	SYMPK	18	27	1.174654
chr19	45830164	45831108	45830636	ENSG00000269148.1	+	antisense	KNOWN	AC092301.3	1	2	1.351486
chr19	45863989	45873797	45868893	ENSG00000170608.2	+	protein_coding	KNOWN	FOXA3	2	2	1.054136
chr19	45883607	45886170	45884888	ENSG00000170604.4	-	protein_coding	KNOWN	IRF2BP1	1	1	1.330262
chr19	45890020	45902604	45896312	ENSG00000176182.5	-	protein_coding	KNOWN	MYPOP	1	3	1.344132
chr19	45913214	45914870	45914042	ENSG00000188425.3	-	protein_coding	KNOWN	NANOS2	1	1	1.029708
chr19	45933734	45973546	45953640	ENSG00000104967.6	-	protein_coding	KNOWN	NOVA2	3	4	0.598693
chr19	45938139	45938282	45938210	ENSG00000280818.1	-	miRNA	NOVEL	AC008623.1	1	1	0.574054
chr19	45995461	46021318	46008389	ENSG00000104983.8	+	protein_coding	KNOWN	CCDC61	8	14	0.942193
chr19	46018932	46019049	46018990	ENSG00000211580.1	+	miRNA	KNOWN	MIR769	1	1	1.129747
chr19	46019153	46023065	46021109	ENSG00000008438.4	-	protein_coding	KNOWN	PGLYRP1	1	3	1.129747
chr19	46027654	46030161	46028907	ENSG00000268401.1	+	lincRNA	KNOWN	CTC-344H19.4	2	3	1.110089
chr19	46039748	46077118	46058433	ENSG00000204869.8	-	protein_coding	KNOWN	IGFL4	4	6	0.740567
chr19	46101122	46196218	46148670	ENSG00000267922.1	+	lincRNA	KNOWN	AC007193.6	1	4	0.470407
chr19	46111079	46113863	46112471	ENSG00000268053.1	-	processed_pseudogene	KNOWN	CTC-344H19.6	1	2	0.444663
chr19	46120071	46124674	46122372	ENSG00000188624.2	-	protein_coding	KNOWN	IGFL3	1	4	0.444663
chr19	46136746	46137547	46137146	ENSG00000259339.2	-	processed_pseudogene	KNOWN	TGIF1P1	1	1	0.372100
chr19	46143106	46161299	46152202	ENSG00000204866.8	+	protein_coding	KNOWN	IGFL2	5	5	0.363220
chr19	46163893	46180647	46172270	ENSG00000269729.1	-	lincRNA	KNOWN	AC006262.4	2	5	0.434026
chr19	46189166	46203083	46196124	ENSG00000268621.5	-	lincRNA	KNOWN	AC006262.5	6	3	0.979149
chr19	46196238	46197323	46196780	ENSG00000268879.1	+	unprocessed_pseudogene	KNOWN	IGFL1P1	1	4	1.011072
chr19	46203426	46214837	46209131	ENSG00000268460.1	+	processed_transcript	KNOWN	DKFZp434J0226	3	6	0.848339
chr19	46219423	46219920	46219671	ENSG00000269637.1	+	processed_pseudogene	KNOWN	RPL12P41	1	1	0.627246
chr19	46228964	46230388	46229676	ENSG00000269745.1	-	antisense	KNOWN	AC006262.10	1	2	0.663659
chr19	46229752	46231243	46230497	ENSG00000188293.5	+	protein_coding	KNOWN	IGFL1	1	4	0.738459
chr19	46249394	46250163	46249778	ENSG00000277748.1	-	unprocessed_pseudogene	KNOWN	AC006262.11	1	3	0.705147
chr19	46260420	46260858	46260639	ENSG00000268238.1	-	unprocessed_pseudogene	KNOWN	IGFL1P2	1	2	0.500797
chr19	46297046	46343433	46320239	ENSG00000124440.15	+	protein_coding	KNOWN	HIF3A	19	15	0.825428
chr19	46306470	46306577	46306523	ENSG00000199796.1	-	snRNA	KNOWN	RNU6-924P	1	1	0.729422
chr19	46320197	46340004	46330100	ENSG00000269124.1	-	antisense	KNOWN	AC007193.10	1	2	0.862652
chr19	46346994	46392981	46369987	ENSG00000011485.14	+	protein_coding	KNOWN	PPP5C	15	14	0.773774
chr19	46382492	46383169	46382830	ENSG00000268810.1	-	antisense	KNOWN	AC007193.9	1	2	0.797467
chr19	46390515	46390852	46390683	ENSG00000269151.1	-	antisense	KNOWN	AC007193.8	1	2	1.120006
chr19	46410372	46413584	46411978	ENSG00000169515.5	-	protein_coding	KNOWN	CCDC8	1	1	0.911420
chr19	46424697	46425237	46424967	ENSG00000277531.1	-	lincRNA	KNOWN	LLNLF-187D8.1	1	1	0.911420
chr19	46466491	46471563	46469027	ENSG00000182013.17	-	protein_coding	KNOWN	PNMAL1	3	3	0.783892
chr19	46480796	46601200	46540998	ENSG00000230510.6	-	protein_coding	KNOWN	PPP5D1	5	4	0.751093
chr19	46486906	46496498	46491702	ENSG00000204851.6	-	protein_coding	KNOWN	PNMAL2	2	2	0.933460
chr19	46494508	46496502	46495505	ENSG00000204850.4	+	antisense	KNOWN	CTB-158D10.3	1	1	0.946498
chr19	46533669	46534351	46534010	ENSG00000278797.1	+	unprocessed_pseudogene	KNOWN	LLNLR-276E7.1	1	1	1.040545
chr19	46547056	46600861	46573958	ENSG00000268423.4	-	sense_intronic	KNOWN	AC011551.3	2	5	0.639938
chr19	46558641	46559642	46559141	ENSG00000249210.1	+	processed_pseudogene	KNOWN	GAPDHP38	1	1	0.375785
chr19	46601074	46610793	46605933	ENSG00000160014.16	+	protein_coding	KNOWN	CALM3	13	7	0.649088
chr19	46609277	46610779	46610028	ENSG00000269292.1	-	antisense	KNOWN	CTB-12A17.3	1	2	1.019115
chr19	46620468	46625118	46622793	ENSG00000160013.8	-	protein_coding	KNOWN	PTGIR	6	3	1.425570
chr19	46634076	46634685	46634380	ENSG00000167414.4	-	protein_coding	KNOWN	GNG8	1	2	1.172280
chr19	46636810	46639161	46637985	ENSG00000279161.1	-	TEC	KNOWN	CTB-12A17.2	1	1	1.172280
chr19	46647612	46661138	46654375	ENSG00000197380.10	-	protein_coding	KNOWN	DACT3	3	4	0.834076
chr19	46660364	46677447	46668905	ENSG00000245598.6	+	antisense	KNOWN	DACT3-AS1	3	3	0.896161
chr19	46674275	46717127	46695701	ENSG00000105287.12	-	protein_coding	KNOWN	PRKD2	17	19	1.147542
chr19	46688797	46689068	46688932	ENSG00000243560.3	-	misc_RNA	KNOWN	RN7SL364P	1	1	1.070231
chr19	46709271	46709382	46709326	ENSG00000211513.4	-	miRNA	KNOWN	MIR320E	1	1	1.231267
chr19	46719507	46746994	46733250	ENSG00000090372.14	-	protein_coding	KNOWN	STRN4	24	19	1.046435
chr19	46728603	46732700	46730651	ENSG00000269487.1	+	antisense	KNOWN	CTB-174O21.2	1	3	1.044001
chr19	46736312	46736419	46736365	ENSG00000222614.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.023757
chr19	46746046	46776988	46761517	ENSG00000181027.10	+	protein_coding	KNOWN	FKRP	27	5	1.017678
chr19	46774883	46788594	46781738	ENSG00000105281.12	-	protein_coding	KNOWN	SLC1A5	6	8	1.225716
chr19	46787815	46789043	46788429	ENSG00000275719.1	+	antisense	KNOWN	CTB-147N14.6	2	1	1.225716
chr19	46792971	46793189	46793080	ENSG00000280050.1	-	protein_coding	KNOWN	AC008622.1	1	2	0.949120
chr19	46809583	46810182	46809882	ENSG00000275862.1	+	processed_pseudogene	KNOWN	CTB-147N14.7	1	1	0.989586
chr19	46809585	46810183	46809884	ENSG00000269576.1	+	processed_pseudogene	KNOWN	HNRNPMP2	1	1	0.989875
chr19	46826895	46828440	46827667	ENSG00000269014.1	-	processed_pseudogene	KNOWN	CTB-147N14.4	1	2	1.081575
chr19	46838136	46850992	46844564	ENSG00000042753.11	-	protein_coding	KNOWN	AP2S1	10	5	0.909659
chr19	46918676	47005077	46961876	ENSG00000160007.17	+	protein_coding	KNOWN	ARHGAP35	7	7	0.851960
chr19	46946535	46949156	46947845	ENSG00000279948.1	+	TEC	KNOWN	CTD-2233K9.1	1	1	0.803422
chr19	47019820	47045775	47032797	ENSG00000130751.9	+	protein_coding	KNOWN	NPAS1	8	12	0.867769
chr19	47045907	47048630	47047268	ENSG00000130748.6	-	protein_coding	KNOWN	TMEM160	1	3	0.732911
chr19	47064187	47113752	47088969	ENSG00000130749.9	-	protein_coding	KNOWN	ZC3H4	5	15	1.134154
chr19	47113274	47210636	47161955	ENSG00000142230.11	+	protein_coding	KNOWN	SAE1	11	10	0.915685
chr19	47220822	47232766	47226794	ENSG00000105327.15	-	protein_coding	KNOWN	BBC3	6	4	0.893800
chr19	47226942	47227021	47226981	ENSG00000265134.1	+	miRNA	KNOWN	MIR3190	1	1	0.879583
chr19	47255980	47271953	47263966	ENSG00000105321.12	+	protein_coding	KNOWN	CCDC9	6	12	1.114425
chr19	47274453	47275707	47275080	ENSG00000257704.3	+	protein_coding	KNOWN	INAFM1	1	1	1.241604
chr19	47290023	47322066	47306044	ENSG00000197405.7	+	protein_coding	KNOWN	C5AR1	3	4	1.328237
chr19	47332147	47347327	47339737	ENSG00000134830.5	+	protein_coding	KNOWN	C5AR2	2	2	1.113365
chr19	47349281	47382704	47365992	ENSG00000134815.18	+	protein_coding	KNOWN	DHX34	4	17	1.071153
chr19	47403124	47419523	47411323	ENSG00000105419.17	-	protein_coding	KNOWN	MEIS3	14	13	1.084796
chr19	47428017	47472168	47450092	ENSG00000118160.13	-	protein_coding	KNOWN	SLC8A2	7	10	1.160936
chr19	47475144	47484268	47479706	ENSG00000118162.13	-	protein_coding	KNOWN	KPTN	9	13	1.108768
chr19	47484282	47501597	47492939	ENSG00000268061.5	+	antisense	KNOWN	NAPA-AS1	2	4	1.242971
chr19	47487637	47515240	47501438	ENSG00000105402.7	-	protein_coding	KNOWN	NAPA	22	11	1.242056
chr19	47487638	47489519	47488578	ENSG00000279861.1	-	TEC	KNOWN	RP11-43N16.4	1	1	1.108768
chr19	47520685	47555856	47538270	ENSG00000118156.12	-	protein_coding	KNOWN	ZNF541	5	15	0.927765
chr19	47581023	47581321	47581172	ENSG00000276588.1	+	misc_RNA	KNOWN	RN7SL322P	1	1	0.786579
chr19	47581231	47581313	47581272	ENSG00000281476.1	+	miRNA	NOVEL	AC010331.1	1	1	0.786579
chr19	47607524	47733098	47670311	ENSG00000268746.1	+	lincRNA	KNOWN	CTD-2571L23.8	1	3	1.047814
chr19	47607873	47608454	47608163	ENSG00000277383.1	-	antisense	KNOWN	CTD-3001H11.2	1	1	0.799994
chr19	47608196	47703277	47655736	ENSG00000063169.10	+	protein_coding	KNOWN	GLTSCR1	4	15	1.001313
chr19	47615699	47626395	47621047	ENSG00000269806.1	-	antisense	KNOWN	GLTSCR1-AS1	1	2	1.168954
chr19	47661657	47663895	47662776	ENSG00000278999.1	-	TEC	KNOWN	AC008985.1	1	1	0.798001
chr19	47713343	47743134	47728238	ENSG00000024422.11	+	protein_coding	KNOWN	EHD2	5	6	1.325122
chr19	47745522	47757058	47751290	ENSG00000105373.18	+	protein_coding	KNOWN	GLTSCR2	12	13	1.404083
chr19	47755853	47755962	47755907	ENSG00000221803.1	+	snoRNA	KNOWN	SNORD23	1	1	1.367626
chr19	47757036	47768840	47762938	ENSG00000269656.1	-	antisense	KNOWN	GLTSCR2-AS1	1	3	1.367626
chr19	47778572	47784686	47781629	ENSG00000178980.14	+	protein_coding	KNOWN	SEPW1	16	7	1.218369
chr19	47794467	47794890	47794678	ENSG00000213035.4	-	processed_pseudogene	KNOWN	RPL23AP80	1	1	0.841296
chr19	47794650	47794920	47794785	ENSG00000271150.1	+	processed_pseudogene	KNOWN	CTD-2571L23.9	1	1	0.841296
chr19	47801243	47819051	47810147	ENSG00000178928.8	-	protein_coding	KNOWN	TPRX1	3	4	0.955609
chr19	47819779	47843330	47831554	ENSG00000105392.15	+	protein_coding	KNOWN	CRX	7	5	1.002702
chr19	47860113	47861512	47860812	ENSG00000259009.4	+	unprocessed_pseudogene	KNOWN	TPRX2P	1	2	0.827130
chr19	47863483	47865341	47864412	ENSG00000259108.2	-	lincRNA	KNOWN	LINC01595	2	2	0.827130
chr19	47870466	47886397	47878431	ENSG00000105398.3	-	protein_coding	KNOWN	SULT2A1	1	6	0.507029
chr19	47898733	47898816	47898774	ENSG00000221072.1	-	miRNA	NOVEL	AC124853.1	1	1	0.392571
chr19	47968046	47992170	47980108	ENSG00000188334.3	-	protein_coding	KNOWN	BSPH1	1	6	0.380963
chr19	47994651	48025153	48009902	ENSG00000169393.8	+	protein_coding	KNOWN	ELSPBP1	6	7	0.498627
chr19	48029953	48044053	48037003	ENSG00000105507.2	-	protein_coding	KNOWN	CABP5	2	6	0.290468
chr19	48047843	48110817	48079330	ENSG00000105499.13	-	protein_coding	KNOWN	PLA2G4C	24	17	0.585106
chr19	48051424	48051509	48051466	ENSG00000221595.1	-	miRNA	NOVEL	AC010458.1	1	1	0.666462
chr19	48061371	48064945	48063158	ENSG00000269420.5	+	antisense	KNOWN	PLA2G4C-AS1	3	5	0.666462
chr19	48115445	48170603	48143024	ENSG00000105486.13	-	protein_coding	KNOWN	LIG1	21	28	0.864477
chr19	48118432	48127706	48123069	ENSG00000269534.5	+	antisense	KNOWN	CTC-453G23.5	2	4	1.116158
chr19	48145908	48147413	48146660	ENSG00000269321.1	+	antisense	KNOWN	CTC-453G23.4	1	2	0.958725
chr19	48170692	48197620	48184156	ENSG00000185453.12	+	protein_coding	KNOWN	C19orf68	3	5	0.958806
chr19	48172318	48287608	48229963	ENSG00000178150.8	+	protein_coding	KNOWN	ZNF114	8	6	0.661165
chr19	48180770	48255946	48218358	ENSG00000105483.16	-	protein_coding	KNOWN	CARD8	31	14	0.687706
chr19	48198107	48199720	48198913	ENSG00000280353.1	-	TEC	KNOWN	CTC-453G23.7	1	1	0.993811
chr19	48204083	48213154	48208618	ENSG00000268583.1	+	antisense	KNOWN	CTC-453G23.8	1	3	0.838696
chr19	48255675	48258199	48256937	ENSG00000268001.1	+	antisense	KNOWN	CARD8-AS1	1	2	0.160056
chr19	48262900	48271283	48267091	ENSG00000268186.1	-	lincRNA	KNOWN	CTC-241F20.4	1	3	0.259842
chr19	48296457	48321894	48309175	ENSG00000105479.15	-	protein_coding	KNOWN	CCDC114	6	14	1.075608
chr19	48321509	48330553	48326031	ENSG00000142227.10	+	protein_coding	KNOWN	EMP3	9	6	0.867733
chr19	48332356	48364237	48348296	ENSG00000161558.10	-	protein_coding	KNOWN	TMEM143	13	8	0.993764
chr19	48364395	48376376	48370385	ENSG00000105467.8	+	protein_coding	KNOWN	SYNGR4	4	5	0.964301
chr19	48382570	48391553	48387061	ENSG00000105438.8	-	protein_coding	KNOWN	KDELR1	5	5	1.151261
chr19	48394875	48444931	48419903	ENSG00000105464.3	+	protein_coding	KNOWN	GRIN2D	1	13	1.133338
chr19	48445773	48457022	48451397	ENSG00000105447.12	+	protein_coding	KNOWN	GRWD1	3	7	1.125642
chr19	48455509	48466980	48461244	ENSG00000182324.6	+	protein_coding	KNOWN	KCNJ14	2	3	1.318672
chr19	48465593	48469693	48467643	ENSG00000268530.5	-	antisense	KNOWN	CTC-273B12.5	4	3	1.318672
chr19	48465837	48472431	48469134	ENSG00000268465.1	+	protein_coding	KNOWN	CTC-273B12.7	1	4	1.306706
chr19	48469032	48482314	48475673	ENSG00000105443.13	+	protein_coding	KNOWN	CYTH2	13	12	1.288589
chr19	48485271	48513189	48499230	ENSG00000142235.8	-	protein_coding	KNOWN	LMTK3	2	16	1.221886
chr19	48513207	48513660	48513433	ENSG00000269814.1	-	lincRNA	KNOWN	CTC-273B12.10	1	1	0.930528
chr19	48552075	48599425	48575750	ENSG00000088002.11	+	protein_coding	KNOWN	SULT2B1	4	7	1.180167
chr19	48600810	48614854	48607832	ENSG00000105523.3	-	protein_coding	KNOWN	FAM83E	4	5	1.358841
chr19	48606743	48607714	48607228	ENSG00000177202.2	+	protein_coding	KNOWN	SPACA4	1	1	1.473082
chr19	48615328	48619536	48617432	ENSG00000063177.12	-	protein_coding	KNOWN	RPL18	16	7	1.142618
chr19	48619272	48624132	48621702	ENSG00000268093.1	-	antisense	KNOWN	AC022154.7	3	3	1.142618
chr19	48619291	48630717	48625004	ENSG00000063176.15	+	protein_coding	KNOWN	SPHK2	13	7	1.159559
chr19	48630030	48637438	48633734	ENSG00000105516.10	-	protein_coding	KNOWN	DBP	5	4	1.412212
chr19	48637942	48646312	48642127	ENSG00000063180.8	-	protein_coding	KNOWN	CA11	4	9	1.412212
chr19	48638071	48682245	48660158	ENSG00000232871.8	+	unitary_pseudogene	KNOWN	SEC1P	4	5	1.156839
chr19	48661407	48673081	48667244	ENSG00000142233.11	-	protein_coding	KNOWN	NTN5	3	7	1.024216
chr19	48695971	48705950	48700960	ENSG00000176920.11	+	protein_coding	KNOWN	FUT2	4	3	1.000131
chr19	48712742	48719721	48716231	ENSG00000176909.11	-	protein_coding	KNOWN	MAMSTR	5	10	1.082832
chr19	48720587	48740721	48730654	ENSG00000105538.8	-	protein_coding	KNOWN	RASIP1	5	15	1.047821
chr19	48740852	48746909	48743880	ENSG00000182264.8	-	protein_coding	KNOWN	IZUMO1	6	10	1.017087
chr19	48748011	48755390	48751700	ENSG00000174951.10	-	protein_coding	KNOWN	FUT1	5	4	1.122083
chr19	48755559	48758330	48756944	ENSG00000105550.8	+	protein_coding	KNOWN	FGF21	2	4	1.160801
chr19	48793152	48793258	48793205	ENSG00000206758.1	-	snRNA	KNOWN	RNU6-317P	1	1	0.848721
chr19	48795062	48811029	48803045	ENSG00000105552.14	-	protein_coding	KNOWN	BCAT2	12	12	0.873566
chr19	48813017	48836678	48824847	ENSG00000087076.8	-	protein_coding	KNOWN	HSD17B14	4	9	1.254594
chr19	48837097	48868632	48852864	ENSG00000105559.11	-	protein_coding	KNOWN	PLEKHA4	11	20	1.281211
chr19	48872392	48876057	48874224	ENSG00000087074.7	+	protein_coding	KNOWN	PPP1R15A	2	3	1.399420
chr19	48880965	48898733	48889849	ENSG00000104804.7	-	protein_coding	KNOWN	TULP2	6	13	1.118198
chr19	48900050	48923372	48911711	ENSG00000104805.15	+	protein_coding	KNOWN	NUCB1	12	14	1.022166
chr19	48910930	48918891	48914910	ENSG00000235191.1	-	antisense	KNOWN	NUCB1-AS1	1	2	1.167126
chr19	48926171	48926444	48926307	ENSG00000260366.1	+	sense_overlapping	KNOWN	CTD-2639E6.4	1	1	1.167126
chr19	48933682	48944969	48939325	ENSG00000104808.7	+	protein_coding	KNOWN	DHDH	4	7	1.087742
chr19	48954815	48961798	48958306	ENSG00000087088.19	+	protein_coding	KNOWN	BAX	13	7	1.206734
chr19	48963975	48965158	48964566	ENSG00000267898.1	+	lincRNA	KNOWN	CTD-2639E6.9	2	2	1.206734
chr19	48965301	48966878	48966089	ENSG00000087086.13	+	protein_coding	KNOWN	FTL	2	5	1.206734
chr19	48966694	48966775	48966734	ENSG00000281206.1	-	miRNA	NOVEL	AC026803.1	1	1	1.206734
chr19	48968125	48993310	48980717	ENSG00000104812.14	-	protein_coding	KNOWN	GYS1	7	16	1.558104
chr19	48993448	49015995	49004721	ENSG00000183207.12	+	protein_coding	KNOWN	RUVBL2	12	15	1.209105
chr19	49009906	49009972	49009939	ENSG00000273898.1	+	miRNA	KNOWN	MIR6798	1	1	1.236382
chr19	49015980	49017090	49016535	ENSG00000104826.11	-	protein_coding	KNOWN	LHB	2	4	1.133812
chr19	49018247	49019484	49018865	ENSG00000268655.1	-	lincRNA	KNOWN	CTB-60B18.10	1	3	1.133812
chr19	49022869	49024333	49023601	ENSG00000104827.12	-	protein_coding	KNOWN	CGB	1	3	1.133812
chr19	49022953	49036895	49029924	ENSG00000267335.2	-	protein_coding	KNOWN	CTB-60B18.6	2	3	1.194982
chr19	49025461	49026020	49025740	ENSG00000267019.1	-	unprocessed_pseudogene	KNOWN	NTF6A	1	1	1.133812
chr19	49029726	49030341	49030033	ENSG00000267099.1	+	unprocessed_pseudogene	KNOWN	NTF6G	1	1	1.202585
chr19	49031912	49033238	49032575	ENSG00000104818.14	+	protein_coding	KNOWN	CGB2	2	3	1.257482
chr19	49035610	49036895	49036252	ENSG00000267631.4	-	protein_coding	KNOWN	CGB1	2	3	1.257482
chr19	49038479	49039038	49038758	ENSG00000267685.2	-	unprocessed_pseudogene	KNOWN	NTF6B	1	1	1.257482
chr19	49042174	49042731	49042452	ENSG00000268669.1	+	unprocessed_pseudogene	KNOWN	CTB-60B18.17	1	1	1.257482
chr19	49043884	49045311	49044597	ENSG00000189052.6	+	protein_coding	KNOWN	CGB5	1	3	1.257482
chr19	49047638	49049106	49048372	ENSG00000213030.5	-	protein_coding	KNOWN	CGB8	1	3	1.257482
chr19	49050217	49050846	49050531	ENSG00000269706.1	-	unprocessed_pseudogene	KNOWN	CTB-60B18.15	1	1	1.442302
chr19	49054275	49058860	49056567	ENSG00000196337.10	-	protein_coding	KNOWN	CGB7	5	5	1.442302
chr19	49055793	49065076	49060434	ENSG00000225950.7	-	protein_coding	KNOWN	NTF4	4	7	1.442302
chr19	49060613	49061132	49060872	ENSG00000268108.1	+	antisense	KNOWN	CTB-60B18.12	1	1	1.442302
chr19	49064259	49064856	49064557	ENSG00000268287.1	+	lincRNA	KNOWN	CTB-60B18.18	1	1	1.442302
chr19	49067418	49072941	49070179	ENSG00000104848.1	-	protein_coding	KNOWN	KCNA7	1	2	1.302288
chr19	49081332	49081630	49081481	ENSG00000265675.2	+	misc_RNA	KNOWN	RN7SL708P	1	1	1.179455
chr19	49085419	49108605	49097012	ENSG00000104852.14	+	protein_coding	KNOWN	SNRNP70	10	11	0.887287
chr19	49114324	49118460	49116392	ENSG00000104863.11	+	protein_coding	KNOWN	LIN7B	7	6	1.432221
chr19	49118397	49119140	49118768	ENSG00000221916.3	-	protein_coding	KNOWN	C19orf73	1	1	1.432221
chr19	49119389	49151026	49135207	ENSG00000177380.13	+	protein_coding	KNOWN	PPFIA3	13	30	1.191803
chr19	49151198	49155424	49153311	ENSG00000130528.11	-	protein_coding	KNOWN	HRC	4	6	1.285187
chr19	49157741	49211836	49184788	ENSG00000130529.15	+	protein_coding	KNOWN	TRPM4	14	25	1.203407
chr19	49255472	49256102	49255787	ENSG00000269009.1	-	processed_pseudogene	KNOWN	SLC6A21P	1	3	0.723988
chr19	49266483	49266568	49266525	ENSG00000265023.1	+	miRNA	NOVEL	AC011450.1	1	1	0.723988
chr19	49275119	49275420	49275269	ENSG00000235555.1	+	processed_pseudogene	KNOWN	SUMO1P4	1	1	0.266866
chr19	49289638	49325225	49307431	ENSG00000063127.15	-	protein_coding	KNOWN	SLC6A16	7	12	0.774074
chr19	49308797	49308868	49308832	ENSG00000265407.1	-	miRNA	KNOWN	MIR4324	1	1	0.855100
chr19	49331617	49340303	49335960	ENSG00000197813.5	-	lincRNA	KNOWN	CTC-301O7.4	2	3	0.691905
chr19	49335171	49343335	49339253	ENSG00000104894.11	+	protein_coding	KNOWN	CD37	15	9	0.691905
chr19	49340595	49362457	49351526	ENSG00000074219.13	-	protein_coding	KNOWN	TEAD2	10	13	0.997266
chr19	49356152	49357769	49356960	ENSG00000268157.1	+	antisense	KNOWN	AC010524.4	1	2	1.227769
chr19	49361783	49375116	49368449	ENSG00000104901.6	+	protein_coding	KNOWN	DKKL1	6	5	1.223375
chr19	49368705	49388081	49378393	ENSG00000268686.1	-	antisense	KNOWN	AC010524.2	1	3	1.217085
chr19	49388218	49417994	49403106	ENSG00000161609.9	+	protein_coding	KNOWN	CCDC155	15	20	1.072076
chr19	49422414	49423441	49422927	ENSG00000142538.1	-	protein_coding	KNOWN	PTH2	1	2	0.978863
chr19	49423749	49428818	49426283	ENSG00000261949.5	+	protein_coding	KNOWN	GFY	2	5	0.978863
chr19	49429401	49442360	49435880	ENSG00000104888.9	-	protein_coding	KNOWN	SLC17A7	5	12	1.246548
chr19	49446298	49453497	49449897	ENSG00000104872.10	-	protein_coding	KNOWN	PIH1D1	24	10	1.349939
chr19	49453169	49471048	49462108	ENSG00000161618.9	+	protein_coding	KNOWN	ALDH16A1	8	17	1.446032
chr19	49462752	49486231	49474491	ENSG00000269469.1	+	protein_coding	KNOWN	CTD-3148I10.9	1	6	1.450374
chr19	49474207	49486231	49480219	ENSG00000090554.12	+	protein_coding	KNOWN	FLT3LG	12	9	1.452492
chr19	49474586	49487637	49481111	ENSG00000273189.1	+	processed_transcript	KNOWN	CTD-3148I10.15	1	8	1.452492
chr19	49487554	49492308	49489931	ENSG00000142541.16	+	protein_coding	KNOWN	RPL13A	14	8	1.373227
chr19	49489965	49490048	49490006	ENSG00000201675.1	+	snoRNA	KNOWN	SNORD32A	1	1	1.356146
chr19	49490615	49490699	49490657	ENSG00000199631.1	+	snoRNA	KNOWN	SNORD33	1	1	1.289293
chr19	49490904	49490974	49490939	ENSG00000202503.1	+	snoRNA	KNOWN	SNORD34	1	1	1.289293
chr19	49491175	49491260	49491217	ENSG00000200259.1	+	snoRNA	KNOWN	SNORD35A	1	1	1.289293
chr19	49496365	49499689	49498027	ENSG00000142534.6	+	protein_coding	KNOWN	RPS11	9	5	1.289293
chr19	49497720	49497806	49497763	ENSG00000200530.1	+	snoRNA	KNOWN	SNORD35B	1	1	1.289293
chr19	49500762	49500873	49500817	ENSG00000207782.2	-	miRNA	KNOWN	MIR150	1	1	1.289293
chr19	49502432	49502639	49502535	ENSG00000268681.1	-	processed_pseudogene	KNOWN	COX6CP7	1	1	1.289293
chr19	49506816	49526333	49516574	ENSG00000104870.12	+	protein_coding	KNOWN	FCGRT	18	9	1.353189
chr19	49527618	49546962	49537290	ENSG00000142552.7	+	protein_coding	KNOWN	RCN3	5	7	1.457596
chr19	49555711	49590262	49572986	ENSG00000142546.13	-	protein_coding	KNOWN	NOSIP	16	9	1.063289
chr19	49566672	49566772	49566722	ENSG00000207073.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.152403
chr19	49580646	49591015	49585830	ENSG00000126460.10	+	protein_coding	KNOWN	PRRG2	5	7	1.038163
chr19	49591643	49626439	49609041	ENSG00000126464.13	+	protein_coding	KNOWN	PRR12	3	14	1.378505
chr19	49625994	49626439	49626216	ENSG00000268636.1	-	antisense	KNOWN	CTB-33G10.11	1	2	1.311722
chr19	49635292	49640201	49637746	ENSG00000126458.3	-	protein_coding	KNOWN	RRAS	2	6	1.645476
chr19	49642125	49658642	49650383	ENSG00000126461.14	+	protein_coding	KNOWN	SCAF1	4	11	1.558370
chr19	49659569	49665875	49662722	ENSG00000126456.15	-	protein_coding	KNOWN	IRF3	31	8	1.479015
chr19	49665142	49673916	49669529	ENSG00000126453.9	+	protein_coding	KNOWN	BCL2L12	13	7	1.477870
chr19	49675786	49689029	49682407	ENSG00000126457.21	+	protein_coding	KNOWN	PRMT1	21	11	1.476450
chr19	49682117	49682195	49682156	ENSG00000274306.1	+	miRNA	KNOWN	MIR5088	1	1	1.476450
chr19	49688664	49690575	49689619	ENSG00000224420.3	+	protein_coding	KNOWN	ADM5	1	2	1.438681
chr19	49688853	49690573	49689713	ENSG00000268677.1	-	antisense	KNOWN	CTB-33G10.6	1	2	1.434632
chr19	49690898	49713731	49702314	ENSG00000169169.14	+	protein_coding	KNOWN	CPT1C	24	20	1.353129
chr19	49719498	49720081	49719789	ENSG00000243829.1	-	processed_pseudogene	KNOWN	CTB-33G10.1	1	1	1.363294
chr19	49739753	49763330	49751541	ENSG00000126467.10	-	protein_coding	KNOWN	TSKS	3	11	1.004732
chr19	49764524	49764630	49764577	ENSG00000206599.1	-	snRNA	KNOWN	RNU6-841P	1	1	1.065997
chr19	49766968	49807113	49787040	ENSG00000196961.12	+	protein_coding	KNOWN	AP2A1	8	24	1.140129
chr19	49791866	49791934	49791900	ENSG00000276270.1	+	miRNA	KNOWN	MIR6799	1	1	1.132864
chr19	49806869	49817376	49812122	ENSG00000010361.13	-	protein_coding	KNOWN	FUZ	18	11	1.168280
chr19	49808933	49809738	49809335	ENSG00000269194.1	+	antisense	KNOWN	AC006942.4	1	2	1.132864
chr19	49818279	49838816	49828547	ENSG00000104973.14	+	protein_coding	KNOWN	MED25	15	18	1.196957
chr19	49832018	49832099	49832058	ENSG00000277609.1	+	miRNA	KNOWN	MIR6800	1	1	1.215102
chr19	49838639	49851676	49845157	ENSG00000268006.1	-	antisense	KNOWN	PTOV1-AS1	2	4	1.240926
chr19	49850735	49860744	49855739	ENSG00000104960.15	+	protein_coding	KNOWN	PTOV1	21	13	1.415855
chr19	49852887	49854967	49853927	ENSG00000268047.1	-	antisense	KNOWN	AC018766.6	1	3	1.415855
chr19	49854591	49854651	49854621	ENSG00000265954.1	+	miRNA	KNOWN	MIR4749	1	1	1.415855
chr19	49856970	49859289	49858129	ENSG00000269352.1	-	antisense	KNOWN	PTOV1-AS2	3	5	1.415855
chr19	49859882	49860514	49860198	ENSG00000267896.1	-	antisense	KNOWN	AC018766.4	1	2	1.415855
chr19	49861204	49878351	49869777	ENSG00000039650.9	-	protein_coding	KNOWN	PNKP	23	17	1.482639
chr19	49869033	49878459	49873746	ENSG00000204673.10	-	protein_coding	KNOWN	AKT1S1	9	5	1.538915
chr19	49877425	49888749	49883087	ENSG00000104946.10	+	protein_coding	KNOWN	TBC1D17	9	18	1.552966
chr19	49888175	49888230	49888202	ENSG00000263462.1	+	miRNA	KNOWN	MIR4750	1	1	1.552966
chr19	49889654	49929539	49909596	ENSG00000104951.15	-	protein_coding	KNOWN	IL4I1	8	11	1.540829
chr19	49906825	49929763	49918294	ENSG00000213024.11	-	protein_coding	KNOWN	NUP62	23	4	1.496724
chr19	49909501	49958391	49933946	ENSG00000269179.1	-	protein_coding	KNOWN	CTC-326K19.6	1	3	1.341215
chr19	49928702	49933935	49931318	ENSG00000169136.8	+	protein_coding	KNOWN	ATF5	5	4	1.470473
chr19	49933064	49933137	49933100	ENSG00000265438.1	+	miRNA	KNOWN	MIR4751	1	1	1.467283
chr19	49948985	49961172	49955078	ENSG00000161640.15	-	protein_coding	KNOWN	SIGLEC11	3	11	0.758607
chr19	49949316	49949527	49949421	ENSG00000221125.2	-	snoRNA	NOVEL	U3	1	1	1.467283
chr19	49969673	49975814	49972743	ENSG00000161643.12	+	transcribed_unprocessed_pseudogene	KNOWN	SIGLEC16	2	10	0.809877
chr19	49976467	50025946	50001206	ENSG00000105053.10	-	protein_coding	KNOWN	VRK3	26	15	0.918097
chr19	50019019	50019320	50019169	ENSG00000276729.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.920426
chr19	50025714	50053414	50039564	ENSG00000142528.15	+	protein_coding	KNOWN	ZNF473	9	6	0.706937
chr19	50043196	50051062	50047129	ENSG00000269091.5	-	antisense	KNOWN	CTD-2126E3.3	2	4	0.670614
chr19	50050589	50066793	50058691	ENSG00000204666.3	+	sense_overlapping	KNOWN	FLJ26850	1	3	0.448826
chr19	50058882	50060232	50059557	ENSG00000269540.1	-	processed_pseudogene	KNOWN	CTD-2126E3.5	1	1	0.448826
chr19	50075123	50075902	50075512	ENSG00000267890.1	+	lincRNA	KNOWN	CTD-2126E3.4	1	2	0.550656
chr19	50152548	50163195	50157871	ENSG00000161652.12	-	protein_coding	KNOWN	IZUMO2	4	8	0.705299
chr19	50188186	50310545	50249365	ENSG00000105357.15	+	protein_coding	KNOWN	MYH14	10	43	0.626992
chr19	50258443	50258722	50258582	ENSG00000276002.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.639924
chr19	50310022	50310539	50310280	ENSG00000267815.1	-	antisense	KNOWN	CTB-191K22.5	1	2	0.679496
chr19	50311937	50333515	50322726	ENSG00000131398.13	-	protein_coding	KNOWN	KCNC3	3	5	0.734334
chr19	50329653	50382982	50356317	ENSG00000131408.13	+	protein_coding	KNOWN	NR1H2	13	14	0.979934
chr19	50333796	50344767	50339281	ENSG00000131401.11	-	transcribed_unprocessed_pseudogene	KNOWN	NAPSB	6	9	1.016043
chr19	50358477	50365830	50362153	ENSG00000131400.7	-	protein_coding	KNOWN	NAPSA	7	9	0.728180
chr19	50365880	50369331	50367605	ENSG00000269392.1	-	antisense	KNOWN	CTB-191K22.6	1	2	0.728180
chr19	50384204	50418018	50401111	ENSG00000062822.12	+	protein_coding	KNOWN	POLD1	14	27	1.030872
chr19	50415799	50428409	50422104	ENSG00000142539.9	+	protein_coding	KNOWN	CTD-2545M3.6	1	10	1.237558
chr19	50418938	50431313	50425125	ENSG00000269404.6	+	protein_coding	KNOWN	SPIB	8	6	1.203131
chr19	50432903	50466321	50449612	ENSG00000086967.9	+	protein_coding	KNOWN	MYBPC2	2	28	0.930912
chr19	50466785	50476753	50471769	ENSG00000142530.10	-	protein_coding	KNOWN	FAM71E1	6	5	0.906108
chr19	50471746	50471907	50471826	ENSG00000281744.1	+	sRNA	NOVEL	Clostridiales-1	1	1	0.885541
chr19	50476400	50490870	50483635	ENSG00000161671.16	+	protein_coding	KNOWN	EMC10	8	8	0.909002
chr19	50480119	50483351	50481735	ENSG00000268854.1	-	antisense	KNOWN	CTD-2545M3.2	1	2	0.885541
chr19	50486810	50487638	50487224	ENSG00000268518.1	-	lincRNA	KNOWN	CTD-2545M3.8	1	2	0.885541
chr19	50505998	50511353	50508675	ENSG00000161677.11	-	protein_coding	KNOWN	JOSD2	6	5	1.284495
chr19	50511600	50514690	50513145	ENSG00000204653.9	-	protein_coding	KNOWN	ASPDH	8	7	1.311670
chr19	50516892	50568045	50542468	ENSG00000131409.12	-	protein_coding	KNOWN	LRRC4B	3	3	0.961604
chr19	50555370	50557969	50556669	ENSG00000268231.1	-	sense_intronic	KNOWN	CTD-2560K21.6	1	2	0.922067
chr19	50621307	50668394	50644850	ENSG00000213023.9	-	protein_coding	KNOWN	SYT3	7	11	0.540344
chr19	50649445	50659310	50654377	ENSG00000235034.6	+	protein_coding	KNOWN	C19orf81	3	5	0.491205
chr19	50661827	50719450	50690638	ENSG00000161681.15	-	protein_coding	KNOWN	SHANK1	8	25	0.912205
chr19	50723329	50725718	50724523	ENSG00000105472.12	+	protein_coding	KNOWN	CLEC11A	3	5	1.110488
chr19	50758382	50759192	50758787	ENSG00000269565.1	+	unprocessed_pseudogene	KNOWN	GPR32P1	1	1	0.618851
chr19	50770464	50771732	50771098	ENSG00000142511.4	+	protein_coding	KNOWN	GPR32	1	1	0.821492
chr19	50776141	50786210	50781175	ENSG00000261341.5	-	lincRNA	KNOWN	CTD-2568A17.1	2	4	0.821492
chr19	50790415	50795224	50792819	ENSG00000142513.5	+	protein_coding	KNOWN	ACPT	1	11	0.926805
chr19	50792685	50793584	50793134	ENSG00000268375.1	-	antisense	KNOWN	CTD-2568A17.8	1	2	0.926805
chr19	50797704	50804929	50801316	ENSG00000167747.13	-	protein_coding	KNOWN	C19orf48	14	5	0.926805
chr19	50799032	50799122	50799077	ENSG00000221381.1	-	snoRNA	KNOWN	SNORD88B	1	1	0.926805
chr19	50799442	50799532	50799487	ENSG00000221241.1	-	snoRNA	KNOWN	SNORD88A	1	1	0.926805
chr19	50802328	50802418	50802373	ENSG00000220988.1	-	snoRNA	KNOWN	SNORD88C	1	1	0.926805
chr19	50808874	50818880	50813877	ENSG00000180279.6	+	lincRNA	KNOWN	MGC45922	4	6	0.752515
chr19	50819148	50823787	50821467	ENSG00000167748.10	-	protein_coding	KNOWN	KLK1	4	6	0.730437
chr19	50825289	50837213	50831251	ENSG00000174562.13	-	protein_coding	KNOWN	KLK15	7	6	0.788044
chr19	50830530	50851089	50840809	ENSG00000267968.1	+	antisense	KNOWN	AC011523.2	1	3	0.808566
chr19	50854915	50860764	50857839	ENSG00000142515.14	+	protein_coding	KNOWN	KLK3	16	6	0.503306
chr19	50861568	50880567	50871067	ENSG00000167751.12	+	protein_coding	KNOWN	KLK2	23	5	0.352058
chr19	50882096	50896398	50889247	ENSG00000197588.9	-	transcribed_unprocessed_pseudogene	KNOWN	KLKP1	3	5	0.282559
chr19	50906352	50910738	50908545	ENSG00000167749.11	-	protein_coding	KNOWN	KLK4	8	5	0.377872
chr19	50927079	50927571	50927325	ENSG00000228674.4	-	processed_pseudogene	KNOWN	CTB-147C22.3	1	1	0.536404
chr19	50943303	50953093	50948198	ENSG00000167754.12	-	protein_coding	KNOWN	KLK5	5	7	0.458579
chr19	50950185	50963649	50956917	ENSG00000269495.1	+	antisense	KNOWN	CTB-147C22.8	2	4	0.480557
chr19	50958631	50969673	50964152	ENSG00000167755.13	-	protein_coding	KNOWN	KLK6	8	7	0.480557
chr19	50962197	50962781	50962489	ENSG00000279676.1	-	TEC	KNOWN	CTB-147C22.6	1	1	0.480557
chr19	50968210	51012129	50990169	ENSG00000267879.1	+	antisense	KNOWN	CTB-147C22.9	1	4	0.430959
chr19	50976482	50984099	50980290	ENSG00000169035.11	-	protein_coding	KNOWN	KLK7	6	6	0.396471
chr19	50996007	51002711	50999359	ENSG00000129455.15	-	protein_coding	KNOWN	KLK8	11	7	0.422816
chr19	50996018	51009581	51002799	ENSG00000269741.5	-	protein_coding	KNOWN	CTC-518B2.8	2	7	0.422816
chr19	51003111	51009634	51006372	ENSG00000213022.5	-	protein_coding	KNOWN	KLK9	2	5	0.422816
chr19	51012739	51020175	51016457	ENSG00000129451.11	-	protein_coding	KNOWN	KLK10	6	6	0.789583
chr19	51014374	51014734	51014554	ENSG00000268739.1	+	antisense	KNOWN	CTC-518B2.12	1	2	0.789583
chr19	51022216	51028039	51025127	ENSG00000167757.13	-	protein_coding	KNOWN	KLK11	11	6	0.789583
chr19	51029092	51035230	51032161	ENSG00000186474.15	-	protein_coding	KNOWN	KLK12	7	7	0.691198
chr19	51030076	51034335	51032205	ENSG00000268906.1	+	antisense	KNOWN	CTC-518B2.9	1	2	0.674139
chr19	51043806	51052077	51047941	ENSG00000268390.1	+	lincRNA	KNOWN	CTC-518B2.10	1	2	0.549381
chr19	51056206	51065114	51060660	ENSG00000167759.12	-	protein_coding	KNOWN	KLK13	9	6	0.177568
chr19	51077495	51084245	51080870	ENSG00000129437.9	-	protein_coding	KNOWN	KLK14	2	8	0.639025
chr19	51097606	51108370	51102988	ENSG00000142544.6	-	protein_coding	KNOWN	CTU1	1	3	0.842714
chr19	51119987	51122965	51121476	ENSG00000268581.1	+	unprocessed_pseudogene	KNOWN	SIGLEC18P	1	3	0.803866
chr19	51124908	51136651	51130779	ENSG00000129450.8	+	protein_coding	KNOWN	SIGLEC9	3	7	0.568747
chr19	51137970	51138634	51138302	ENSG00000267990.1	+	unprocessed_pseudogene	KNOWN	CTD-3187F8.15	1	3	0.388803
chr19	51142299	51153526	51147912	ENSG00000168995.13	+	protein_coding	KNOWN	SIGLEC7	6	7	0.453680
chr19	51143826	51144196	51144011	ENSG00000267895.1	+	transcribed_unprocessed_pseudogene	KNOWN	SIGLEC19P	1	1	0.388803
chr19	51152923	51181966	51167444	ENSG00000269072.1	-	antisense	KNOWN	CTD-3187F8.14	1	5	0.490671
chr19	51155288	51155624	51155456	ENSG00000269681.1	-	processed_pseudogene	KNOWN	CTD-3187F8.6	1	1	0.595316
chr19	51167328	51173524	51170426	ENSG00000171101.13	+	transcribed_unprocessed_pseudogene	KNOWN	SIGLEC17P	5	7	0.450831
chr19	51184905	51190809	51187857	ENSG00000268336.1	+	unprocessed_pseudogene	KNOWN	SIGLEC20P	1	7	0.392222
chr19	51194118	51195540	51194829	ENSG00000268652.1	-	processed_pseudogene	KNOWN	CTD-3187F8.7	1	2	0.712144
chr19	51198855	51201449	51200152	ENSG00000269253.1	+	unprocessed_pseudogene	KNOWN	SIGLEC21P	1	3	0.712144
chr19	51206929	51207009	51206969	ENSG00000278617.1	-	miRNA	KNOWN	MIR8074	1	1	0.712144
chr19	51211080	51212088	51211584	ENSG00000268849.5	+	transcribed_unprocessed_pseudogene	KNOWN	SIGLEC22P	2	3	0.385937
chr19	51225064	51243860	51234462	ENSG00000105383.14	+	protein_coding	KNOWN	CD33	7	7	0.394247
chr19	51246348	51269330	51257839	ENSG00000179213.13	+	protein_coding	KNOWN	SIGLECL1	8	6	0.307483
chr19	51251231	51271179	51261205	ENSG00000268595.1	-	antisense	KNOWN	CTD-3187F8.2	1	3	0.291884
chr19	51271266	51281234	51276250	ENSG00000268318.5	+	lincRNA	KNOWN	CTD-3187F8.11	3	4	0.313316
chr19	51280862	51283022	51281942	ENSG00000269021.1	+	transcribed_unprocessed_pseudogene	KNOWN	CTD-3187F8.12	1	4	0.313316
chr19	51311848	51330354	51321101	ENSG00000142549.9	+	protein_coding	KNOWN	IGLON5	1	8	0.567924
chr19	51331536	51342124	51336830	ENSG00000186806.5	-	protein_coding	KNOWN	VSIG10L	2	10	0.825656
chr19	51340695	51344117	51342406	ENSG00000267905.5	+	antisense	KNOWN	CTD-2616J11.16	2	5	0.825656
chr19	51345169	51353293	51349231	ENSG00000267984.1	+	antisense	KNOWN	CTD-2616J11.9	1	2	0.890037
chr19	51345169	51366418	51355793	ENSG00000105379.9	-	protein_coding	KNOWN	ETFB	5	6	0.948347
chr19	51350373	51368099	51359236	ENSG00000269403.1	-	protein_coding	KNOWN	CTD-2616J11.11	1	4	0.984439
chr19	51361712	51365544	51363628	ENSG00000268520.1	-	sense_intronic	KNOWN	CTD-2616J11.10	1	2	0.984439
chr19	51367098	51369003	51368050	ENSG00000160318.6	-	protein_coding	KNOWN	CLDND2	3	5	0.984439
chr19	51371606	51372715	51372160	ENSG00000105374.9	-	protein_coding	KNOWN	NKG7	5	4	1.022989
chr19	51379909	51387960	51383934	ENSG00000105370.7	-	protein_coding	KNOWN	LIM2	2	5	1.022989
chr19	51388289	51390574	51389431	ENSG00000262874.1	-	protein_coding	KNOWN	C19orf84	2	2	0.983877
chr19	51394488	51403650	51399069	ENSG00000268889.1	+	lincRNA	KNOWN	CTD-2616J11.14	1	2	0.867560
chr19	51396755	51403526	51400140	ENSG00000268144.1	-	processed_pseudogene	KNOWN	NIFKP6	1	2	0.867560
chr19	51410021	51417803	51413912	ENSG00000142512.14	-	protein_coding	KNOWN	SIGLEC10	11	11	0.413920
chr19	51414298	51414965	51414631	ENSG00000254760.1	+	antisense	KNOWN	CTD-2616J11.3	1	2	0.413920
chr19	51415724	51417425	51416574	ENSG00000255441.1	+	antisense	KNOWN	CTD-2616J11.2	2	3	0.413920
chr19	51426347	51426668	51426507	ENSG00000268711.1	-	unprocessed_pseudogene	KNOWN	CTD-2616J11.15	1	1	0.413920
chr19	51442379	51442650	51442514	ENSG00000269181.1	+	processed_pseudogene	KNOWN	CTD-3073N11.5	1	1	0.310039
chr19	51450847	51458456	51454651	ENSG00000105366.15	-	protein_coding	KNOWN	SIGLEC8	4	7	0.565923
chr19	51468360	51468636	51468498	ENSG00000268957.1	-	unprocessed_pseudogene	KNOWN	SIGLEC26P	1	1	0.565923
chr19	51478622	51490952	51484787	ENSG00000213822.6	+	protein_coding	KNOWN	CEACAM18	1	6	0.475102
chr19	51491357	51501789	51496573	ENSG00000254521.6	-	protein_coding	KNOWN	SIGLEC12	3	8	0.356176
chr19	51505059	51505362	51505210	ENSG00000268839.1	-	unprocessed_pseudogene	KNOWN	CTD-3073N11.7	1	1	0.356176
chr19	51508573	51509311	51508942	ENSG00000269580.2	+	unprocessed_pseudogene	KNOWN	SIGLEC27P	1	2	0.356176
chr19	51519525	51531856	51525690	ENSG00000105492.15	-	protein_coding	KNOWN	SIGLEC6	9	8	0.469280
chr19	51519731	51520260	51519995	ENSG00000268777.1	+	antisense	KNOWN	CTD-3073N11.9	1	2	0.500688
chr19	51560122	51560590	51560356	ENSG00000269130.1	-	unprocessed_pseudogene	KNOWN	SIGLEC28P	1	2	0.378613
chr19	51563797	51564910	51564353	ENSG00000268267.1	-	unprocessed_pseudogene	KNOWN	SIGLEC29P	1	1	0.378613
chr19	51571298	51592508	51581903	ENSG00000105497.7	+	protein_coding	KNOWN	ZNF175	5	5	0.328968
chr19	51594561	51606150	51600355	ENSG00000269388.1	+	transcribed_processed_pseudogene	KNOWN	AC018755.16	3	3	0.702377
chr19	51599289	51600470	51599879	ENSG00000267808.1	+	lincRNA	KNOWN	AC018755.17	1	1	0.702377
chr19	51611503	51645545	51628524	ENSG00000105501.11	-	protein_coding	KNOWN	SIGLEC5	2	10	0.267563
chr19	51612091	51646889	51629490	ENSG00000268500.5	-	protein_coding	KNOWN	AC018755.18	2	9	0.261901
chr19	51621136	51621701	51621418	ENSG00000244071.1	+	processed_pseudogene	KNOWN	RPL9P33	1	1	0.357652
chr19	51639478	51639931	51639704	ENSG00000273837.1	-	sense_intronic	KNOWN	LLNLR-470E3.1	1	1	0.160379
chr19	51642553	51646801	51644677	ENSG00000254415.3	-	protein_coding	KNOWN	SIGLEC14	2	7	0.160379
chr19	51648862	51649610	51649236	ENSG00000243469.1	+	processed_pseudogene	KNOWN	RPL7P51	1	1	0.160379
chr19	51685363	51693456	51689409	ENSG00000269959.1	-	lincRNA	KNOWN	SPACA6P-AS	1	2	0.594699
chr19	51692612	51692681	51692646	ENSG00000207550.1	+	miRNA	KNOWN	MIR99B	1	1	0.891173
chr19	51692773	51692881	51692827	ENSG00000198972.2	+	miRNA	KNOWN	MIRLET7E	1	1	0.891173
chr19	51693254	51693339	51693296	ENSG00000208008.1	+	miRNA	KNOWN	MIR125A	1	1	0.891173
chr19	51693340	51712387	51702863	ENSG00000182310.12	+	processed_transcript	KNOWN	SPACA6P	13	8	0.914802
chr19	51713112	51723994	51718553	ENSG00000105509.10	-	protein_coding	KNOWN	HAS1	5	5	1.079643
chr19	51745172	51804110	51774641	ENSG00000171051.8	-	protein_coding	KNOWN	FPR1	4	3	0.387950
chr19	51752026	51770526	51761276	ENSG00000171049.8	+	protein_coding	KNOWN	FPR2	6	4	0.239098
chr19	51795163	51826189	51810676	ENSG00000187474.4	+	protein_coding	KNOWN	FPR3	2	2	0.606524
chr19	51839771	51840945	51840358	ENSG00000268316.1	-	lincRNA	KNOWN	AC006272.2	1	2	0.230968
chr19	51839924	51843324	51841624	ENSG00000269483.1	-	lincRNA	KNOWN	AC006272.1	1	3	0.230968
chr19	51855802	51890950	51873376	ENSG00000161551.12	-	protein_coding	KNOWN	ZNF577	17	7	0.136926
chr19	51879872	51948759	51914315	ENSG00000176024.16	+	protein_coding	KNOWN	ZNF613	8	6	0.322053
chr19	51888025	51900463	51894244	ENSG00000268095.1	+	antisense	KNOWN	ZNF649-AS1	1	3	0.235811
chr19	51889224	51905040	51897132	ENSG00000198093.10	-	protein_coding	KNOWN	ZNF649	7	6	0.245991
chr19	51949134	51981367	51965250	ENSG00000269235.1	+	antisense	KNOWN	ZNF350-AS1	2	3	0.102854
chr19	51964343	51986856	51975599	ENSG00000256683.6	-	protein_coding	KNOWN	ZNF350	9	5	0.137231
chr19	51991332	52008230	51999781	ENSG00000197619.13	-	protein_coding	KNOWN	ZNF615	15	7	0.199476
chr19	52012765	52030240	52021502	ENSG00000142556.18	-	protein_coding	KNOWN	ZNF614	4	6	0.197091
chr19	52031379	52095738	52063558	ENSG00000256087.6	-	protein_coding	KNOWN	ZNF432	7	5	0.554055
chr19	52049007	52049754	52049380	ENSG00000275055.1	+	antisense	KNOWN	CTC-471J1.11	1	1	0.528856
chr19	52058490	52063703	52061096	ENSG00000260160.1	-	sense_overlapping	KNOWN	CTC-471J1.2	1	2	0.555703
chr19	52064466	52095765	52080115	ENSG00000197608.11	-	protein_coding	KNOWN	ZNF841	7	6	0.568372
chr19	52110318	52110726	52110522	ENSG00000270248.1	-	processed_pseudogene	KNOWN	CTC-471J1.10	1	1	0.292586
chr19	52113091	52139922	52126506	ENSG00000204611.6	-	protein_coding	KNOWN	ZNF616	5	5	0.376250
chr19	52130548	52171533	52151040	ENSG00000267827.5	-	processed_transcript	KNOWN	CTC-471J1.8	2	5	0.522289
chr19	52142626	52144156	52143391	ENSG00000268458.1	+	lincRNA	KNOWN	CTC-471J1.9	1	2	0.518806
chr19	52143043	52143336	52143189	ENSG00000243680.1	+	processed_pseudogene	KNOWN	RPL37P23	1	1	0.518806
chr19	52153864	52171643	52162753	ENSG00000196267.12	-	protein_coding	KNOWN	ZNF836	6	5	0.529578
chr19	52171158	52177002	52174080	ENSG00000267927.1	+	antisense	KNOWN	CTD-2525I3.2	1	2	0.706702
chr19	52190039	52229533	52209786	ENSG00000105568.17	+	protein_coding	KNOWN	PPP2R1A	12	15	0.757211
chr19	52222020	52222098	52222059	ENSG00000274380.1	+	miRNA	KNOWN	MIR6801	1	1	0.901610
chr19	52222225	52231294	52226759	ENSG00000268015.1	-	antisense	KNOWN	CTD-2525I3.3	3	3	0.857089
chr19	52241765	52242440	52242102	ENSG00000277562.1	-	processed_pseudogene	KNOWN	CTD-2525I3.8	1	1	0.589822
chr19	52259076	52259187	52259131	ENSG00000207265.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.485064
chr19	52269571	52296046	52282808	ENSG00000196214.10	+	protein_coding	KNOWN	ZNF766	9	6	0.456330
chr19	52281797	52281893	52281845	ENSG00000208002.1	+	miRNA	KNOWN	MIR643	1	1	0.394111
chr19	52284780	52297920	52291350	ENSG00000269102.1	-	antisense	KNOWN	CTD-2525I3.5	1	2	0.554441
chr19	52297177	52325922	52311549	ENSG00000198464.13	+	protein_coding	KNOWN	ZNF480	6	6	0.474369
chr19	52300693	52345229	52322961	ENSG00000269535.1	-	antisense	KNOWN	CTD-2525I3.6	1	7	0.405206
chr19	52336245	52367778	52352011	ENSG00000167554.14	+	protein_coding	KNOWN	ZNF610	9	6	0.409102
chr19	52369917	52385795	52377856	ENSG00000221923.8	+	protein_coding	KNOWN	ZNF880	6	5	0.388448
chr19	52388842	52397766	52393304	ENSG00000269834.5	-	processed_transcript	KNOWN	ZNF528-AS1	4	6	0.452735
chr19	52392659	52392755	52392707	ENSG00000277977.1	+	unprocessed_pseudogene	KNOWN	CTD-3018O17.5	1	1	0.462360
chr19	52397849	52418412	52408130	ENSG00000167555.13	+	protein_coding	KNOWN	ZNF528	12	8	0.385576
chr19	52425863	52426202	52426032	ENSG00000269776.1	-	processed_pseudogene	KNOWN	DPPA5P1	1	1	0.274684
chr19	52429187	52452315	52440751	ENSG00000198633.10	+	protein_coding	KNOWN	ZNF534	5	5	0.451085
chr19	52453576	52512154	52482865	ENSG00000258405.9	+	protein_coding	KNOWN	ZNF578	6	6	0.172361
chr19	52473336	52475239	52474287	ENSG00000278543.1	-	unprocessed_pseudogene	KNOWN	CTD-3018O17.6	1	1	-0.003692
chr19	52511282	52512342	52511812	ENSG00000269349.1	-	antisense	KNOWN	CTD-3099C6.5	1	2	0.491739
chr19	52527652	52564464	52546058	ENSG00000198482.10	+	protein_coding	KNOWN	ZNF808	7	5	0.594701
chr19	52555822	52587174	52571498	ENSG00000167562.11	+	protein_coding	KNOWN	ZNF701	6	6	0.740116
chr19	52564076	52564231	52564153	ENSG00000242255.1	+	transcribed_unprocessed_pseudogene	KNOWN	RPL39P34	1	1	0.515491
chr19	52575883	52585561	52580722	ENSG00000268886.1	-	antisense	KNOWN	CTD-3099C6.7	1	2	0.925531
chr19	52588505	52597345	52592925	ENSG00000123870.10	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF137P	2	3	0.521986
chr19	52594060	52690496	52642278	ENSG00000167766.18	-	protein_coding	KNOWN	ZNF83	19	7	0.604224
chr19	52597699	52598887	52598293	ENSG00000268970.1	-	sense_intronic	KNOWN	CTD-3099C6.11	1	2	0.439915
chr19	52650437	52653284	52651860	ENSG00000269825.1	-	sense_intronic	KNOWN	CTD-3099C6.9	1	1	0.637271
chr19	52702813	52735073	52718943	ENSG00000213020.8	-	protein_coding	KNOWN	ZNF611	19	9	0.367359
chr19	52764195	52818004	52791099	ENSG00000189190.8	-	protein_coding	KNOWN	ZNF600	6	12	0.484343
chr19	52797409	52857600	52827504	ENSG00000198538.10	-	protein_coding	KNOWN	ZNF28	8	5	0.535204
chr19	52809824	52810708	52810266	ENSG00000255875.2	+	processed_pseudogene	KNOWN	CTD-2102P23.1	1	1	0.554682
chr19	52838008	52857649	52847828	ENSG00000204604.9	-	protein_coding	KNOWN	ZNF468	7	5	0.553916
chr19	52861807	52862866	52862336	ENSG00000268225.1	-	processed_pseudogene	KNOWN	CTD-2331H12.5	1	1	0.484661
chr19	52863790	52897693	52880741	ENSG00000182986.12	-	protein_coding	KNOWN	ZNF320	14	8	0.357688
chr19	52880663	52962768	52921715	ENSG00000283088.1	-	protein_coding	KNOWN	CTD-2331H12.8	1	8	0.452144
chr19	52915196	52923470	52919333	ENSG00000213793.4	-	lincRNA	KNOWN	ZNF888	1	4	0.195085
chr19	52923382	52924075	52923728	ENSG00000269646.1	+	lincRNA	KNOWN	CTD-2331H12.7	1	2	0.195085
chr19	52927135	52942601	52934868	ENSG00000213801.4	-	transcribed_processed_pseudogene	KNOWN	ZNF321P	2	2	0.574498
chr19	52928475	52962823	52945649	ENSG00000221874.4	-	protein_coding	KNOWN	ZNF816-ZNF321P	1	4	0.594573
chr19	52949379	52962911	52956145	ENSG00000180257.13	-	protein_coding	KNOWN	ZNF816	8	5	0.544461
chr19	52956041	52981654	52968847	ENSG00000269082.1	-	processed_transcript	KNOWN	CTD-2620I22.1	1	4	0.530021
chr19	52968251	53037898	53003074	ENSG00000242779.6	-	transcribed_processed_pseudogene	KNOWN	ZNF702P	12	5	0.375936
chr19	53004040	53005150	53004595	ENSG00000268282.1	+	processed_pseudogene	KNOWN	CTD-2620I22.2	1	1	0.222191
chr19	53007512	53013180	53010346	ENSG00000267943.1	+	lincRNA	KNOWN	CTD-2620I22.3	1	2	0.360516
chr19	53013921	53016122	53015021	ENSG00000269526.1	+	protein_coding	KNOWN	ERVV-1	1	1	0.468663
chr19	53044738	53051076	53047907	ENSG00000268964.1	+	protein_coding	KNOWN	ERVV-2	1	2	0.159271
chr19	53066606	53103436	53085021	ENSG00000170949.17	-	protein_coding	KNOWN	ZNF160	16	7	0.489243
chr19	53107879	53133077	53120478	ENSG00000170954.11	-	protein_coding	KNOWN	ZNF415	26	7	0.297224
chr19	53124072	53159075	53141573	ENSG00000197937.12	-	protein_coding	KNOWN	ZNF347	8	5	0.281759
chr19	53159213	53193386	53176299	ENSG00000197497.10	-	protein_coding	KNOWN	ZNF665	6	5	0.363660
chr19	53162428	53163563	53162995	ENSG00000268842.1	+	antisense	KNOWN	CTD-2245F17.2	1	2	0.485137
chr19	53197111	53211015	53204063	ENSG00000269051.5	+	lincRNA	KNOWN	CTD-2245F17.3	2	5	0.618911
chr19	53212988	53213396	53213192	ENSG00000269001.1	+	processed_pseudogene	KNOWN	ZNF818P	1	1	0.215374
chr19	53223973	53224879	53224426	ENSG00000267809.1	-	processed_pseudogene	KNOWN	NDUFV2P1	1	1	0.215374
chr19	53235381	53254898	53245139	ENSG00000197928.10	-	protein_coding	KNOWN	ZNF677	11	5	0.191281
chr19	53240675	53241913	53241294	ENSG00000269288.1	+	antisense	KNOWN	CTD-2245F17.6	1	2	0.211662
chr19	53258292	53261837	53260064	ENSG00000196131.6	+	protein_coding	KNOWN	VN1R2	2	2	0.130466
chr19	53266676	53267723	53267199	ENSG00000228567.3	-	protein_coding	KNOWN	VN1R4	1	1	0.130466
chr19	53267870	53270932	53269401	ENSG00000269758.1	-	lincRNA	KNOWN	CTD-2245F17.9	1	3	0.164300
chr19	53281559	53284944	53283251	ENSG00000189348.6	+	transcribed_unprocessed_pseudogene	KNOWN	FAM90A27P	2	4	0.241505
chr19	53289601	53291626	53290613	ENSG00000163098.4	-	protein_coding	KNOWN	BIRC8	1	1	0.200261
chr19	53299051	53308644	53303847	ENSG00000269118.1	-	transcribed_unprocessed_pseudogene	KNOWN	FAM90A28P	2	4	0.190172
chr19	53315137	53316043	53315590	ENSG00000174677.4	+	unitary_pseudogene	KNOWN	VN1R6P	1	1	0.208637
chr19	53330675	53392217	53361446	ENSG00000203326.10	+	protein_coding	KNOWN	ZNF525	9	4	0.292869
chr19	53333749	53354869	53344309	ENSG00000213799.10	+	protein_coding	KNOWN	ZNF845	3	5	0.393004
chr19	53386233	53386388	53386310	ENSG00000241069.1	+	transcribed_processed_pseudogene	KNOWN	CTD-3141N22.1	1	1	0.174063
chr19	53389793	53430413	53410103	ENSG00000196417.12	+	protein_coding	KNOWN	ZNF765	8	8	0.323697
chr19	53413190	53413345	53413267	ENSG00000239912.1	+	processed_pseudogene	KNOWN	RPL39P36	1	1	0.390432
chr19	53426019	53426499	53426259	ENSG00000249435.1	-	processed_pseudogene	KNOWN	CTD-2224J9.7	1	1	0.390432
chr19	53431984	53444670	53438327	ENSG00000241015.2	+	transcribed_processed_pseudogene	KNOWN	TPM3P9	2	2	0.596955
chr19	53431993	53458261	53445127	ENSG00000160336.14	+	protein_coding	KNOWN	ZNF761	5	6	0.548969
chr19	53467735	53496255	53481995	ENSG00000198346.10	+	protein_coding	KNOWN	ZNF813	3	5	0.497508
chr19	53479350	53480091	53479720	ENSG00000250731.1	+	processed_pseudogene	KNOWN	TPM3P6	1	1	0.545799
chr19	53495887	53496037	53495962	ENSG00000241434.1	+	transcribed_processed_pseudogene	KNOWN	CTD-2224J9.4	1	1	0.362350
chr19	53503392	53512687	53508039	ENSG00000213777.5	+	transcribed_processed_pseudogene	KNOWN	CTD-2224J9.8	3	3	0.414791
chr19	53512092	53512616	53512354	ENSG00000274892.1	-	unprocessed_pseudogene	KNOWN	CTB-167G5.7	1	1	0.543688
chr19	53520981	53580269	53550625	ENSG00000130844.16	+	protein_coding	KNOWN	ZNF331	22	7	0.709991
chr19	53599628	53608451	53604039	ENSG00000268864.4	-	transcribed_unprocessed_pseudogene	KNOWN	CTB-167G5.6	2	9	0.458589
chr19	53616802	53617254	53617028	ENSG00000269608.1	+	processed_pseudogene	KNOWN	CTB-167G5.3	1	1	0.611152
chr19	53629713	53630041	53629877	ENSG00000242668.3	+	misc_RNA	KNOWN	RN7SL317P	1	1	0.597507
chr19	53632056	53637009	53634532	ENSG00000204595.1	+	protein_coding	KNOWN	DPRX	1	3	0.504590
chr19	53653685	53653791	53653738	ENSG00000200393.1	+	snRNA	KNOWN	RNU6-698P	1	1	0.316865
chr19	53657400	53658462	53657931	ENSG00000270347.1	-	unprocessed_pseudogene	KNOWN	CTC-339O9.2	1	2	0.316865
chr19	53666673	53666770	53666721	ENSG00000207645.1	+	miRNA	KNOWN	MIR512-1	1	1	0.316865
chr19	53669157	53669254	53669205	ENSG00000207644.1	+	miRNA	KNOWN	MIR512-2	1	1	0.316865
chr19	53671968	53672040	53672004	ENSG00000221017.1	+	miRNA	KNOWN	MIR1323	1	1	0.307452
chr19	53674197	53674320	53674258	ENSG00000207869.1	+	miRNA	KNOWN	MIR498	1	1	0.307452
chr19	53675711	53675797	53675754	ENSG00000207599.1	+	miRNA	KNOWN	MIR520E	1	1	0.307452
chr19	53679003	53679085	53679044	ENSG00000207616.1	+	miRNA	KNOWN	MIR515-1	1	1	0.307452
chr19	53679940	53680023	53679981	ENSG00000207810.1	+	miRNA	KNOWN	MIR519E	1	1	0.307452
chr19	53682162	53682260	53682211	ENSG00000280524.1	+	miRNA	KNOWN	MIR520F	1	1	0.307452
chr19	53684995	53685109	53685052	ENSG00000207615.2	+	miRNA	KNOWN	MIR515-2	1	1	0.307452
chr19	53686469	53686555	53686512	ENSG00000207788.1	+	miRNA	KNOWN	MIR519C	1	1	0.307452
chr19	53688481	53688567	53688524	ENSG00000221421.1	+	miRNA	KNOWN	MIR1283-1	1	1	0.307452
chr19	53690881	53690965	53690923	ENSG00000207594.1	+	miRNA	KNOWN	MIR520A	1	1	0.315664
chr19	53694393	53694475	53694434	ENSG00000207580.1	+	miRNA	KNOWN	MIR526B	1	1	0.315664
chr19	53695213	53695293	53695253	ENSG00000207825.1	+	miRNA	KNOWN	MIR519B	1	1	0.315664
chr19	53697533	53697617	53697575	ENSG00000207711.1	+	miRNA	KNOWN	MIR525	1	1	0.315664
chr19	53698371	53698489	53698430	ENSG00000281285.1	+	miRNA	NOVEL	AC011453.4	1	1	0.315664
chr19	53700015	53700101	53700058	ENSG00000207706.1	+	miRNA	KNOWN	MIR518F	1	1	0.315664
chr19	53701227	53701287	53701257	ENSG00000207722.1	+	miRNA	KNOWN	MIR520B	1	1	0.315664
chr19	53702737	53702819	53702778	ENSG00000207862.1	+	miRNA	KNOWN	MIR518B	1	1	0.315664
chr19	53706252	53706336	53706294	ENSG00000207629.1	+	miRNA	KNOWN	MIR526A1	1	1	0.315664
chr19	53707453	53707539	53707496	ENSG00000207738.1	+	miRNA	KNOWN	MIR520C	1	1	0.315664
chr19	53708731	53708848	53708789	ENSG00000280867.1	+	miRNA	KNOWN	MIR518C	1	1	0.315664
chr19	53710988	53711093	53711040	ENSG00000280911.1	+	miRNA	KNOWN	MIR524	1	1	0.091992
chr19	53712268	53712354	53712311	ENSG00000207734.1	+	miRNA	KNOWN	MIR517A	1	1	0.091992
chr19	53713347	53713434	53713390	ENSG00000207981.1	+	miRNA	KNOWN	MIR519D	1	1	0.091992
chr19	53716594	53716680	53716637	ENSG00000207549.1	+	miRNA	KNOWN	MIR521-2	1	1	0.091992
chr19	53719064	53719165	53719114	ENSG00000251843.1	-	snRNA	KNOWN	RNU6-803P	1	1	0.091992
chr19	53720096	53720182	53720139	ENSG00000207735.1	+	miRNA	KNOWN	MIR520D	1	1	0.091992
chr19	53721076	53721142	53721109	ENSG00000207837.1	+	miRNA	KNOWN	MIR517B	1	1	0.091992
chr19	53722166	53722255	53722210	ENSG00000207799.1	+	miRNA	KNOWN	MIR520G	1	1	0.091992
chr19	53725442	53725526	53725484	ENSG00000207925.1	+	miRNA	KNOWN	MIR516B2	1	1	0.091992
chr19	53726922	53726986	53726954	ENSG00000211532.1	+	miRNA	KNOWN	MIR526A2	1	1	0.091992
chr19	53729838	53729925	53729881	ENSG00000207987.1	+	miRNA	KNOWN	MIR518E	1	1	0.091992
chr19	53731006	53731090	53731048	ENSG00000207803.1	+	miRNA	KNOWN	MIR518A1	1	1	0.478541
chr19	53732981	53733083	53733032	ENSG00000252734.1	-	snRNA	KNOWN	RNU6-980P	1	1	0.478541
chr19	53734863	53734981	53734922	ENSG00000281027.1	+	miRNA	NOVEL	AC011453.3	1	1	0.478541
chr19	53736840	53736949	53736894	ENSG00000207946.2	+	miRNA	KNOWN	MIR516B1	1	1	0.478541
chr19	53739333	53739419	53739376	ENSG00000207699.1	+	miRNA	KNOWN	MIR518A2	1	1	0.478541
chr19	53741313	53741407	53741360	ENSG00000207838.1	+	miRNA	KNOWN	MIR517C	1	1	0.478541
chr19	53742512	53742599	53742555	ENSG00000207861.1	+	miRNA	KNOWN	MIR520H	1	1	0.478541
chr19	53745004	53745105	53745054	ENSG00000252025.1	-	snRNA	KNOWN	RNU6-982P	1	1	0.478541
chr19	53748636	53748722	53748679	ENSG00000207634.1	+	miRNA	KNOWN	MIR521-1	1	1	0.478541
chr19	53749851	53749951	53749901	ENSG00000252191.1	-	snRNA	KNOWN	RNU6-751P	1	1	0.478541
chr19	53751197	53751303	53751250	ENSG00000281751.1	+	miRNA	KNOWN	MIR522	1	1	0.371146
chr19	53752397	53752481	53752439	ENSG00000207992.1	+	miRNA	KNOWN	MIR519A1	1	1	0.371146
chr19	53754018	53754102	53754060	ENSG00000207979.1	+	miRNA	KNOWN	MIR527	1	1	0.371146
chr19	53756727	53756836	53756781	ENSG00000207767.2	+	miRNA	KNOWN	MIR516A1	1	1	0.371146
chr19	53757869	53757969	53757919	ENSG00000265569.1	+	miRNA	NOVEL	AC011453.1	1	1	0.371146
chr19	53758232	53758318	53758275	ENSG00000221548.1	+	miRNA	KNOWN	MIR1283-2	1	1	0.371146
chr19	53760087	53760188	53760137	ENSG00000252063.1	-	snRNA	KNOWN	RNU6-1041P	1	1	0.371146
chr19	53761133	53761222	53761177	ENSG00000207620.1	+	miRNA	KNOWN	MIR516A2	1	1	0.371146
chr19	53761961	53764199	53763080	ENSG00000269842.3	+	lincRNA	KNOWN	CTC-339O9.1	1	1	0.371146
chr19	53762335	53762445	53762390	ENSG00000280835.1	+	miRNA	NOVEL	AC011453.2	1	1	0.371146
chr19	53766534	53766632	53766583	ENSG00000252979.1	-	snRNA	KNOWN	RNU6-165P	1	1	0.371146
chr19	53767971	53768553	53768262	ENSG00000237589.1	-	processed_pseudogene	KNOWN	HMGN1P32	1	2	0.371146
chr19	53772506	53773280	53772893	ENSG00000229000.1	-	processed_pseudogene	KNOWN	SEPT7P8	1	1	0.173606
chr19	53775599	53775882	53775740	ENSG00000238150.1	+	processed_pseudogene	KNOWN	AC008753.3	1	1	0.173606
chr19	53787597	53788169	53787883	ENSG00000269877.1	-	lincRNA	KNOWN	CTD-3022G6.1	1	2	0.173606
chr19	53787675	53787741	53787708	ENSG00000199031.1	+	miRNA	KNOWN	MIR371A	1	1	0.173606
chr19	53787890	53787956	53787923	ENSG00000199095.1	+	miRNA	KNOWN	MIR372	1	1	0.173606
chr19	53788705	53788773	53788739	ENSG00000199143.1	+	miRNA	KNOWN	MIR373	1	1	0.173606
chr19	53788782	53789168	53788975	ENSG00000269564.1	+	lincRNA	KNOWN	AC008753.4	1	1	0.173606
chr19	53793603	53824394	53808998	ENSG00000142405.21	-	protein_coding	KNOWN	NLRP12	6	10	0.495531
chr19	53831859	53831926	53831892	ENSG00000274524.1	-	miRNA	NOVEL	AC008753.1	1	1	0.707562
chr19	53854581	53869107	53861844	ENSG00000228323.2	-	antisense	KNOWN	AC008753.6	1	4	0.617248
chr19	53864763	53866140	53865451	ENSG00000232324.1	+	lincRNA	KNOWN	AC008440.10	1	3	0.617248
chr19	53866223	53876437	53871330	ENSG00000179820.15	+	protein_coding	KNOWN	MYADM	9	3	0.954562
chr19	53874626	53876049	53875337	ENSG00000232220.2	-	antisense	KNOWN	AC008440.5	1	2	1.152403
chr19	53879190	53907652	53893421	ENSG00000126583.10	+	protein_coding	KNOWN	PRKCG	4	18	0.996989
chr19	53909335	53943941	53926638	ENSG00000105605.7	+	protein_coding	KNOWN	CACNG7	4	6	0.846203
chr19	53963040	53990215	53976627	ENSG00000142408.2	+	protein_coding	KNOWN	CACNG8	1	4	0.680791
chr19	53982307	53982397	53982352	ENSG00000215998.1	+	miRNA	KNOWN	MIR935	1	1	0.713912
chr19	53992288	54012669	54002478	ENSG00000130433.7	+	protein_coding	KNOWN	CACNG6	3	4	0.823313
chr19	54031412	54031504	54031458	ENSG00000276206.1	+	unprocessed_pseudogene	KNOWN	CTD-3093M3.1	1	1	0.811540
chr19	54040825	54063953	54052389	ENSG00000189068.9	-	protein_coding	KNOWN	VSTM1	6	9	0.647009
chr19	54069895	54081365	54075630	ENSG00000248385.7	-	protein_coding	KNOWN	TARM1	2	5	0.455326
chr19	54094668	54102692	54098680	ENSG00000170909.13	-	protein_coding	KNOWN	OSCAR	11	7	0.629258
chr19	54102728	54109257	54105992	ENSG00000170906.15	+	protein_coding	KNOWN	NDUFA3	14	6	0.629258
chr19	54107013	54115675	54111344	ENSG00000105619.13	-	protein_coding	KNOWN	TFPT	4	6	0.793883
chr19	54115410	54131719	54123564	ENSG00000105618.13	+	protein_coding	KNOWN	PRPF31	9	14	0.919353
chr19	54119511	54125343	54122427	ENSG00000237017.1	-	antisense	KNOWN	AC012314.8	1	4	0.880488
chr19	54137728	54155681	54146704	ENSG00000088038.17	+	protein_coding	KNOWN	CNOT3	10	18	1.212805
chr19	54155161	54159882	54157521	ENSG00000105617.3	-	protein_coding	KNOWN	LENG1	1	4	1.134636
chr19	54160108	54173250	54166679	ENSG00000167608.11	-	protein_coding	KNOWN	TMC4	10	15	1.144548
chr19	54173412	54189882	54181647	ENSG00000125505.16	-	protein_coding	KNOWN	MBOAT7	14	8	1.174703
chr19	54189938	54194536	54192237	ENSG00000170892.10	+	protein_coding	KNOWN	TSEN34	7	6	1.004641
chr19	54199454	54199971	54199712	ENSG00000223660.1	-	lincRNA	KNOWN	AC012314.20	1	2	1.002355
chr19	54200742	54249003	54224872	ENSG00000170889.13	+	protein_coding	KNOWN	RPS9	13	6	0.873140
chr19	54209092	54209418	54209255	ENSG00000224579.1	-	unprocessed_pseudogene	KNOWN	AC012314.19	1	1	1.002355
chr19	54216278	54223506	54219892	ENSG00000204577.11	-	protein_coding	KNOWN	LILRB3	9	14	1.218664
chr19	54224523	54224881	54224702	ENSG00000269524.1	+	lincRNA	KNOWN	CTB-83J4.1	1	1	1.218664
chr19	54229036	54230213	54229624	ENSG00000235081.1	+	processed_pseudogene	KNOWN	AC010492.2	1	2	1.078282
chr19	54236592	54242791	54239691	ENSG00000244482.10	-	protein_coding	KNOWN	LILRA6	4	10	0.446565
chr19	54238904	54281184	54260044	ENSG00000131042.13	-	protein_coding	KNOWN	LILRB2	9	14	0.682241
chr19	54246101	54247322	54246711	ENSG00000249189.1	-	unprocessed_pseudogene	KNOWN	AC010492.4	1	3	0.446565
chr19	54249431	54257301	54253366	ENSG00000105609.16	-	protein_coding	KNOWN	LILRB5	5	13	0.916382
chr19	54263951	54264053	54264002	ENSG00000212314.2	-	snRNA	KNOWN	RNU6-1307P	1	1	0.952928
chr19	54268005	54269045	54268525	ENSG00000240296.1	+	processed_pseudogene	KNOWN	AC010492.5	1	2	0.952928
chr19	54282109	54282180	54282144	ENSG00000264703.1	+	miRNA	KNOWN	MIR4752	1	1	0.432002
chr19	54294049	54294366	54294207	ENSG00000240197.1	-	unprocessed_pseudogene	KNOWN	AC010518.3	1	2	0.565624
chr19	54296194	54296252	54296223	ENSG00000276758.1	-	unprocessed_pseudogene	KNOWN	AC010518.2	1	1	0.565624
chr19	54298105	54298814	54298459	ENSG00000251431.1	-	unprocessed_pseudogene	KNOWN	AC008984.5	1	3	0.565624
chr19	54301758	54306026	54303892	ENSG00000234436.1	-	unprocessed_pseudogene	KNOWN	AC008984.7	1	2	0.565624
chr19	54307070	54313139	54310104	ENSG00000187116.13	-	protein_coding	KNOWN	LILRA5	5	7	0.758229
chr19	54308915	54337168	54323041	ENSG00000275210.1	-	processed_transcript	KNOWN	AC008984.2	1	8	0.904335
chr19	54320204	54321212	54320708	ENSG00000249654.1	-	transcribed_unprocessed_pseudogene	KNOWN	VN1R104P	1	1	0.937892
chr19	54328272	54331434	54329853	ENSG00000250507.1	-	transcribed_unprocessed_pseudogene	KNOWN	AC008984.6	1	5	0.903421
chr19	54333185	54339150	54336167	ENSG00000239961.2	-	protein_coding	KNOWN	LILRA4	3	8	0.861935
chr19	54351384	54370558	54360971	ENSG00000167613.15	-	protein_coding	KNOWN	LAIR1	23	10	0.759178
chr19	54379489	54379960	54379724	ENSG00000237955.1	+	processed_pseudogene	KNOWN	AC008746.10	1	1	0.528091
chr19	54415219	54436900	54426059	ENSG00000167614.13	+	protein_coding	KNOWN	TTYH1	17	15	0.912729
chr19	54430654	54434698	54432676	ENSG00000227407.1	-	antisense	KNOWN	AC008746.3	1	2	1.264053
chr19	54434183	54434665	54434424	ENSG00000268496.1	+	sense_intronic	KNOWN	CTD-2587H19.2	1	1	1.264053
chr19	54438010	54438346	54438178	ENSG00000269873.1	-	lincRNA	KNOWN	CTD-2587H19.3	1	1	1.264053
chr19	54438665	54439544	54439104	ENSG00000267838.2	-	lincRNA	KNOWN	AC008746.12	1	1	1.264053
chr19	54444813	54449045	54446929	ENSG00000226696.5	-	antisense	KNOWN	LENG8-AS1	3	3	1.264053
chr19	54446830	54447047	54446938	ENSG00000235681.1	+	processed_pseudogene	KNOWN	AC008746.5	1	1	1.264053
chr19	54448887	54462037	54455462	ENSG00000167615.16	+	protein_coding	KNOWN	LENG8	9	16	1.143173
chr19	54461796	54463711	54462753	ENSG00000275183.1	-	protein_coding	KNOWN	LENG9	1	1	1.132007
chr19	54465026	54473264	54469145	ENSG00000167617.2	-	protein_coding	KNOWN	CDC42EP5	2	3	1.188294
chr19	54497879	54510687	54504283	ENSG00000167618.9	+	protein_coding	KNOWN	LAIR2	4	5	0.697546
chr19	54521723	54522031	54521877	ENSG00000213016.3	+	unprocessed_pseudogene	KNOWN	AC008746.9	1	1	0.572474
chr19	54532692	54545771	54539231	ENSG00000104970.10	+	protein_coding	KNOWN	KIR3DX1	8	9	0.099297
chr19	54551970	54552256	54552113	ENSG00000235181.1	+	unprocessed_pseudogene	KNOWN	AC009892.2	1	1	0.438723
chr19	54572920	54590287	54581603	ENSG00000239998.5	+	protein_coding	KNOWN	LILRA2	8	9	0.402308
chr19	54573879	54602090	54587984	ENSG00000104974.10	+	protein_coding	KNOWN	LILRA1	6	10	0.449666
chr19	54589441	54590287	54589864	ENSG00000269271.1	+	lincRNA	KNOWN	CTB-83J4.2	1	1	0.439532
chr19	54607870	54608376	54608123	ENSG00000238094.1	+	unprocessed_pseudogene	KNOWN	AC009892.5	1	2	0.515345
chr19	54617158	54637528	54627343	ENSG00000104972.15	+	protein_coding	KNOWN	LILRB1	13	16	0.554305
chr19	54629392	54629463	54629427	ENSG00000264799.1	-	miRNA	NOVEL	AC245036.1	1	1	0.553042
chr19	54635722	54638892	54637307	ENSG00000224730.1	-	antisense	KNOWN	AC009892.10	1	2	0.556459
chr19	54643889	54670359	54657124	ENSG00000186818.12	+	protein_coding	KNOWN	LILRB4	10	14	0.231602
chr19	54644707	54644782	54644744	ENSG00000277520.1	+	miRNA	NOVEL	AC245036.6	1	1	0.556459
chr19	54644793	54644868	54644830	ENSG00000274787.1	+	miRNA	NOVEL	AC245036.3	1	1	0.556459
chr19	54644922	54644997	54644959	ENSG00000276748.1	+	miRNA	NOVEL	AC245036.5	1	1	0.556459
chr19	54645008	54645083	54645045	ENSG00000275694.1	+	miRNA	NOVEL	AC245036.4	1	1	0.556459
chr19	54645180	54645255	54645217	ENSG00000274095.1	+	miRNA	NOVEL	AC245036.2	1	1	0.556459
chr19	54645309	54645383	54645346	ENSG00000277636.1	+	miRNA	KNOWN	MIR8061	1	1	0.556459
chr19	54647944	54648853	54648398	ENSG00000242856.3	+	transcribed_processed_pseudogene	KNOWN	VN1R105P	1	1	0.556459
chr19	54652085	54652230	54652157	ENSG00000237323.1	+	unprocessed_pseudogene	KNOWN	AC009892.9	1	1	0.131162
chr19	54671231	54672591	54671911	ENSG00000225370.1	+	unprocessed_pseudogene	KNOWN	AC011515.2	1	3	0.298021
chr19	54696604	54700905	54698754	ENSG00000186152.6	+	unprocessed_pseudogene	KNOWN	LILRP1	1	7	0.291832
chr19	54703952	54704235	54704093	ENSG00000228790.1	+	unprocessed_pseudogene	KNOWN	AC098784.1	1	1	0.291832
chr19	54707916	54713453	54710684	ENSG00000170858.10	+	transcribed_processed_pseudogene	KNOWN	LILRP2	2	7	0.385308
chr19	54724479	54736536	54730507	ENSG00000242019.1	+	protein_coding	KNOWN	KIR3DL3	1	8	0.411052
chr19	54724496	54798285	54761390	ENSG00000215765.3	+	processed_transcript	KNOWN	CTB-61M7.1	1	6	0.388181
chr19	54738515	54753052	54745783	ENSG00000243772.7	+	protein_coding	KNOWN	KIR2DL3	1	8	0.354715
chr19	54755023	54767371	54761197	ENSG00000242473.1	+	unprocessed_pseudogene	KNOWN	KIR2DP1	1	9	0.240090
chr19	54769811	54784322	54777066	ENSG00000125498.19	+	protein_coding	KNOWN	KIR2DL1	2	9	0.563724
chr19	54786355	54790318	54788336	ENSG00000264257.1	+	transcribed_unprocessed_pseudogene	KNOWN	KIR3DP1	1	3	0.545062
chr19	54803535	54814517	54809026	ENSG00000189013.14	+	protein_coding	KNOWN	KIR2DL4	9	8	0.304177
chr19	54816468	54866993	54841730	ENSG00000167633.17	+	protein_coding	KNOWN	KIR3DL1	4	9	0.408014
chr19	54832676	54848569	54840622	ENSG00000221957.8	+	polymorphic_pseudogene	KNOWN	KIR2DS4	2	8	0.442273
chr19	54850443	54867207	54858825	ENSG00000240403.5	+	protein_coding	KNOWN	KIR3DL2	2	9	0.426656
chr19	54868939	54869045	54868992	ENSG00000199308.1	-	snRNA	KNOWN	RNU6-222P	1	1	0.426656
chr19	54874248	54890472	54882360	ENSG00000186431.18	+	protein_coding	KNOWN	FCAR	13	6	0.143282
chr19	54890673	54891420	54891046	ENSG00000268734.1	+	lincRNA	KNOWN	CTB-61M7.2	1	1	0.622507
chr19	54906150	54916140	54911145	ENSG00000189430.12	+	protein_coding	KNOWN	NCR1	8	8	0.662334
chr19	54923509	54966312	54944910	ENSG00000167634.12	-	protein_coding	KNOWN	NLRP7	9	13	0.685775
chr19	54948864	54948993	54948928	ENSG00000275012.1	+	processed_pseudogene	KNOWN	CTC-550B14.10	1	1	0.705713
chr19	54953130	55001142	54977136	ENSG00000022556.15	+	protein_coding	KNOWN	NLRP2	19	14	0.558539
chr19	54973817	54974417	54974117	ENSG00000243494.1	+	processed_pseudogene	KNOWN	CTC-550B14.1	1	2	0.461830
chr19	55000173	55000440	55000306	ENSG00000280921.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.577419
chr19	55006193	55048086	55027139	ENSG00000267265.5	+	antisense	KNOWN	CTC-550B14.7	3	5	0.593480
chr19	55013705	55038264	55025984	ENSG00000088053.11	-	protein_coding	KNOWN	GP6	5	8	0.536787
chr19	55027593	55053928	55040760	ENSG00000267149.2	-	processed_transcript	KNOWN	CTC-550B14.6	1	6	0.757914
chr19	55039108	55071291	55055199	ENSG00000160439.15	-	protein_coding	KNOWN	RDH13	23	8	0.739550
chr19	55072020	55087923	55079971	ENSG00000131037.14	+	protein_coding	KNOWN	EPS8L1	19	20	0.972620
chr19	55090913	55117559	55104236	ENSG00000125503.12	-	protein_coding	KNOWN	PPP1R12C	9	22	1.361180
chr19	55119250	55120383	55119816	ENSG00000267507.1	-	processed_pseudogene	KNOWN	CTD-2587H24.1	1	3	1.083222
chr19	55123225	55123292	55123258	ENSG00000275863.1	-	miRNA	KNOWN	MIR7975	1	1	1.083222
chr19	55132794	55149354	55141074	ENSG00000105048.16	-	protein_coding	KNOWN	TNNT1	17	14	0.926568
chr19	55151767	55157773	55154770	ENSG00000129991.12	-	protein_coding	KNOWN	TNNI3	9	8	1.279827
chr19	55154757	55160671	55157714	ENSG00000267110.1	-	protein_coding	KNOWN	CTD-2587H24.4	1	9	1.279827
chr19	55158661	55166722	55162691	ENSG00000167646.13	-	protein_coding	KNOWN	DNAAF3	17	12	1.279827
chr19	55158939	55177540	55168239	ENSG00000267577.1	+	antisense	KNOWN	CTD-2587H24.5	1	5	1.200100
chr19	55167171	55167274	55167222	ENSG00000239137.1	+	snoRNA	NOVEL	snoU13	1	1	1.279827
chr19	55171199	55180441	55175820	ENSG00000129990.14	-	protein_coding	KNOWN	SYT5	11	9	1.083168
chr19	55181248	55209506	55195377	ENSG00000080031.9	-	protein_coding	KNOWN	PTPRH	7	20	1.135322
chr19	55216660	55221616	55219138	ENSG00000267649.1	+	lincRNA	KNOWN	CTD-2587H24.10	2	2	1.313019
chr19	55226639	55229264	55227951	ENSG00000180089.5	-	protein_coding	KNOWN	TMEM86B	3	3	1.313019
chr19	55227219	55230279	55228749	ENSG00000276570.1	-	processed_transcript	KNOWN	CTD-2587H24.14	1	1	1.319618
chr19	55229780	55258995	55244387	ENSG00000105063.18	-	protein_coding	KNOWN	PPP6R1	8	24	1.372719
chr19	55230885	55230952	55230918	ENSG00000275519.1	-	miRNA	KNOWN	MIR6804	1	1	1.385137
chr19	55239912	55239976	55239944	ENSG00000278328.1	-	miRNA	KNOWN	MIR6802	1	1	1.385137
chr19	55245186	55245250	55245218	ENSG00000278264.1	-	miRNA	KNOWN	MIR6803	1	1	1.385137
chr19	55262231	55280381	55271306	ENSG00000133265.10	-	protein_coding	KNOWN	HSPBP1	9	9	1.181975
chr19	55282072	55312533	55297302	ENSG00000160469.16	+	protein_coding	KNOWN	BRSK1	8	21	1.278822
chr19	55292997	55293068	55293032	ENSG00000280855.1	-	miRNA	NOVEL	AC020922.1	1	1	1.346357
chr19	55312029	55312495	55312262	ENSG00000268729.1	-	antisense	KNOWN	CTD-2105E13.14	1	2	1.433996
chr19	55312801	55334048	55323424	ENSG00000180061.9	-	protein_coding	KNOWN	TMEM150B	7	8	1.400148
chr19	55338945	55339283	55339114	ENSG00000276831.1	-	lincRNA	KNOWN	CTD-2105E13.16	1	1	1.256379
chr19	55339853	55348120	55343986	ENSG00000133247.13	+	protein_coding	KNOWN	SUV420H2	12	9	1.256379
chr19	55349306	55354814	55352060	ENSG00000160471.12	-	protein_coding	KNOWN	COX6B2	10	8	1.394099
chr19	55352301	55359516	55355908	ENSG00000267706.3	-	protein_coding	KNOWN	CTD-2105E13.6	1	8	1.413920
chr19	55354908	55363260	55359084	ENSG00000180043.11	-	protein_coding	KNOWN	FAM71E2	2	11	1.413920
chr19	55364389	55370463	55367426	ENSG00000095752.6	-	protein_coding	KNOWN	IL11	4	5	1.422478
chr19	55376836	55378244	55377540	ENSG00000160472.4	+	protein_coding	KNOWN	TMEM190	1	5	1.525947
chr19	55377579	55378125	55377852	ENSG00000269275.1	-	antisense	KNOWN	CTD-2105E13.15	1	1	1.525947
chr19	55379245	55384598	55381921	ENSG00000233493.3	-	protein_coding	KNOWN	TMEM238	1	2	1.525947
chr19	55385345	55403250	55394297	ENSG00000108107.12	+	protein_coding	KNOWN	RPL28	11	5	1.351466
chr19	55388181	55388242	55388211	ENSG00000277326.1	+	miRNA	KNOWN	MIR6805	1	1	1.525947
chr19	55399745	55407777	55403761	ENSG00000108106.13	-	protein_coding	KNOWN	UBE2S	4	5	1.290185
chr19	55428740	55442863	55435801	ENSG00000187902.11	-	protein_coding	KNOWN	SHISA7	2	5	0.873119
chr19	55452985	55462343	55457664	ENSG00000063241.7	-	protein_coding	KNOWN	ISOC2	8	6	1.348090
chr19	55467438	55467934	55467686	ENSG00000279063.1	-	TEC	KNOWN	CTD-2537I9.15	1	1	1.348090
chr19	55475983	55476482	55476232	ENSG00000269859.1	-	antisense	KNOWN	CTD-2537I9.16	1	1	1.279619
chr19	55476332	55484487	55480409	ENSG00000197483.9	+	protein_coding	KNOWN	ZNF628	3	3	1.279619
chr19	55485004	55487568	55486286	ENSG00000090971.4	+	protein_coding	KNOWN	NAT14	5	3	1.279619
chr19	55488404	55519098	55503751	ENSG00000179954.14	+	protein_coding	KNOWN	SSC5D	6	14	1.288599
chr19	55529733	55537089	55533411	ENSG00000187550.8	-	protein_coding	KNOWN	SBK2	2	4	1.244947
chr19	55540656	55545543	55543099	ENSG00000231274.5	-	protein_coding	KNOWN	SBK3	2	4	1.251319
chr19	55576770	55580845	55578807	ENSG00000218891.4	-	protein_coding	KNOWN	ZNF579	2	2	1.105289
chr19	55591371	55601970	55596670	ENSG00000179943.7	-	protein_coding	KNOWN	FIZ1	5	3	1.006971
chr19	55600022	55603138	55601580	ENSG00000171443.6	+	protein_coding	KNOWN	ZNF524	3	2	1.006971
chr19	55605405	55617269	55611337	ENSG00000261221.3	+	protein_coding	KNOWN	ZNF865	2	2	0.915706
chr19	55612490	55613097	55612793	ENSG00000276488.1	-	antisense	KNOWN	CTD-2537I9.18	1	1	0.858035
chr19	55620742	55624601	55622671	ENSG00000179922.5	-	protein_coding	KNOWN	ZNF784	2	2	0.858035
chr19	55635016	55643469	55639242	ENSG00000213015.8	+	protein_coding	KNOWN	ZNF580	6	2	0.998306
chr19	55635459	55645622	55640540	ENSG00000171425.9	+	protein_coding	KNOWN	ZNF581	4	2	0.998306
chr19	55641062	55653161	55647111	ENSG00000173581.7	+	protein_coding	KNOWN	CCDC106	9	6	1.118309
chr19	55654146	55674715	55664430	ENSG00000063244.12	+	protein_coding	KNOWN	U2AF2	8	12	1.364720
chr19	55661901	55674715	55668308	ENSG00000267523.1	-	antisense	KNOWN	CTD-2537I9.12	2	2	1.308580
chr19	55670632	55672069	55671350	ENSG00000267096.1	+	sense_intronic	KNOWN	CTD-2537I9.13	1	2	1.052892
chr19	55675226	55709858	55692542	ENSG00000063245.14	+	protein_coding	KNOWN	EPN1	7	11	1.246749
chr19	55684772	55684916	55684844	ENSG00000211571.1	+	miRNA	NOVEL	AC010525.1	1	1	1.052892
chr19	55694118	55694558	55694338	ENSG00000267117.1	-	antisense	KNOWN	AC010525.4	1	1	1.390959
chr19	55705978	55706172	55706075	ENSG00000267689.1	-	processed_pseudogene	KNOWN	AC010525.5	1	1	1.390959
chr19	55707550	55707855	55707702	ENSG00000268593.3	+	processed_pseudogene	KNOWN	CTD-2611O12.6	1	1	1.390959
chr19	55708432	55738402	55723417	ENSG00000185792.9	-	protein_coding	KNOWN	NLRP9	2	9	0.617862
chr19	55737285	55737600	55737442	ENSG00000222524.1	+	misc_RNA	KNOWN	RN7SKP109	1	1	0.259343
chr19	55759014	55763175	55761094	ENSG00000223638.3	+	protein_coding	KNOWN	RFPL4A	1	3	0.415496
chr19	55769141	55773179	55771160	ENSG00000229292.1	+	protein_coding	KNOWN	RFPL4AL1	1	3	0.226677
chr19	55777553	55778900	55778226	ENSG00000255238.1	+	processed_pseudogene	KNOWN	RFPL4AP1	1	2	0.175731
chr19	55785397	55836800	55811098	ENSG00000179873.14	-	protein_coding	KNOWN	NLRP11	6	12	0.244765
chr19	55836578	55881854	55859216	ENSG00000160505.15	+	protein_coding	KNOWN	NLRP4	4	10	0.284965
chr19	55891699	55932336	55912017	ENSG00000173572.11	-	protein_coding	KNOWN	NLRP13	2	12	0.329482
chr19	55947832	55988629	55968230	ENSG00000179709.8	+	protein_coding	KNOWN	NLRP8	2	10	0.090499
chr19	55999726	56061813	56030769	ENSG00000171487.14	+	protein_coding	KNOWN	NLRP5	3	15	0.269310
chr19	56066684	56078801	56072742	ENSG00000267522.1	+	lincRNA	KNOWN	CTD-2621I17.6	1	4	0.430360
chr19	56072367	56072640	56072503	ENSG00000281209.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.507029
chr19	56087366	56121280	56104323	ENSG00000142409.5	-	protein_coding	KNOWN	ZNF787	3	3	0.935987
chr19	56105416	56105510	56105463	ENSG00000223060.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.881859
chr19	56127236	56127466	56127351	ENSG00000279959.1	-	TEC	KNOWN	CTD-2621I17.8	1	1	1.132069
chr19	56132599	56160893	56146746	ENSG00000167685.14	+	protein_coding	KNOWN	ZNF444	12	5	0.950669
chr19	56149817	56150490	56150153	ENSG00000279794.1	+	TEC	KNOWN	CTD-2621I17.3	1	1	1.007076
chr19	56176020	56185775	56180897	ENSG00000197487.8	+	protein_coding	KNOWN	GALP	3	6	0.848498
chr19	56189570	56197920	56193745	ENSG00000197213.9	-	protein_coding	KNOWN	ZSCAN5B	4	5	0.572293
chr19	56202301	56209452	56205876	ENSG00000204532.6	+	protein_coding	KNOWN	ZSCAN5CP	2	5	0.557334
chr19	56217168	56217777	56217472	ENSG00000242411.2	-	processed_pseudogene	KNOWN	CTD-2086L14.1	1	1	0.407679
chr19	56219670	56368383	56294026	ENSG00000131848.9	-	protein_coding	KNOWN	ZSCAN5A	17	7	0.317377
chr19	56244043	56247482	56245762	ENSG00000267908.2	+	unprocessed_pseudogene	KNOWN	ZSCAN5D	1	4	0.253536
chr19	56272769	56310450	56291609	ENSG00000267710.5	+	processed_transcript	KNOWN	AC006116.20	7	9	0.389044
chr19	56311928	56312486	56312207	ENSG00000267298.1	-	sense_intronic	KNOWN	AC006116.19	1	1	0.629842
chr19	56314703	56341287	56327995	ENSG00000267549.5	+	antisense	KNOWN	AC006116.17	3	3	0.417457
chr19	56316524	56316636	56316580	ENSG00000200646.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.629842
chr19	56317177	56318008	56317592	ENSG00000213014.3	-	processed_pseudogene	KNOWN	VN2R17P	1	1	0.629842
chr19	56319790	56322310	56321050	ENSG00000266907.1	-	processed_pseudogene	KNOWN	AC006116.22	1	2	0.629842
chr19	56338288	56338648	56338468	ENSG00000267145.1	-	processed_pseudogene	KNOWN	AC006116.14	1	1	0.129662
chr19	56342432	56343419	56342925	ENSG00000266932.1	-	transcribed_processed_pseudogene	KNOWN	AC006116.13	1	1	0.129662
chr19	56347081	56348183	56347632	ENSG00000267429.1	-	sense_intronic	KNOWN	AC006116.15	1	1	0.129662
chr19	56354493	56368053	56361273	ENSG00000267606.1	-	lincRNA	KNOWN	AC006116.21	3	4	-0.022179
chr19	56368099	56379828	56373963	ENSG00000240225.10	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF542P	12	7	0.073497
chr19	56375846	56393545	56384695	ENSG00000018869.16	-	protein_coding	KNOWN	ZNF582	7	5	0.176347
chr19	56376704	56377284	56376994	ENSG00000267776.1	-	sense_intronic	KNOWN	AC006116.24	1	1	0.091992
chr19	56377037	56377792	56377414	ENSG00000267459.1	-	transcribed_processed_pseudogene	KNOWN	AC006116.27	1	1	0.091992
chr19	56386226	56386690	56386458	ENSG00000267781.1	+	processed_pseudogene	KNOWN	SLC25A36P1	1	1	0.091992
chr19	56387412	56388424	56387918	ENSG00000267192.1	+	antisense	KNOWN	AC006116.12	1	2	0.091992
chr19	56393656	56399172	56396414	ENSG00000267454.5	+	lincRNA	KNOWN	ZNF582-AS1	5	4	0.513028
chr19	56396316	56396401	56396358	ENSG00000266631.1	-	miRNA	NOVEL	AC006116.1	1	1	0.513028
chr19	56397966	56436035	56417000	ENSG00000198440.9	+	protein_coding	KNOWN	ZNF583	8	5	0.475878
chr19	56439325	56478065	56458695	ENSG00000198046.11	-	protein_coding	KNOWN	ZNF667	8	7	0.001092
chr19	56477250	56500666	56488958	ENSG00000166770.10	+	lincRNA	KNOWN	ZNF667-AS1	9	3	0.364301
chr19	56480397	56483977	56482187	ENSG00000279405.1	-	TEC	KNOWN	AC098795.1	1	2	0.387730
chr19	56485923	56494280	56490101	ENSG00000276578.1	-	unprocessed_pseudogene	KNOWN	LLNLR-285B5.1	1	4	0.361384
chr19	56507843	56530221	56519032	ENSG00000196263.7	+	protein_coding	KNOWN	ZNF471	4	5	0.197272
chr19	56535299	56535763	56535531	ENSG00000267224.1	+	lincRNA	KNOWN	AC005498.4	1	1	0.330931
chr19	56536156	56538575	56537365	ENSG00000267421.6	-	lincRNA	KNOWN	AC005498.3	5	3	0.330931
chr19	56538948	56556810	56547879	ENSG00000196867.7	+	protein_coding	KNOWN	ZFP28	5	8	0.245136
chr19	56545566	56567411	56556488	ENSG00000269696.1	-	antisense	KNOWN	AC007228.11	1	2	0.151590
chr19	56547105	56547241	56547173	ENSG00000281545.1	+	miRNA	NOVEL	AC005498.1	1	1	0.330931
chr19	56567511	56588911	56578211	ENSG00000197016.11	+	protein_coding	KNOWN	ZNF470	6	6	0.351457
chr19	56589495	56590281	56589888	ENSG00000268847.1	-	unprocessed_pseudogene	KNOWN	SIGLEC31P	1	2	0.376652
chr19	56595264	56626481	56610872	ENSG00000197951.8	+	protein_coding	KNOWN	ZNF71	3	4	0.184425
chr19	56613810	56613951	56613880	ENSG00000268036.1	+	transcribed_processed_pseudogene	KNOWN	AC007228.8	1	1	0.023928
chr19	56643145	56655766	56649455	ENSG00000268182.5	+	protein_coding	KNOWN	SMIM17	2	4	0.539674
chr19	56661981	56671783	56666882	ENSG00000127903.13	-	protein_coding	KNOWN	ZNF835	2	2	0.481227
chr19	56672268	56684653	56678460	ENSG00000268352.1	+	lincRNA	KNOWN	AC007228.5	1	2	0.680222
chr19	56672574	56673901	56673237	ENSG00000268568.1	-	lincRNA	KNOWN	AC007228.9	1	1	0.680222
chr19	56690686	56799646	56745166	ENSG00000269793.5	+	antisense	KNOWN	ZIM2-AS1	5	4	0.256296
chr19	56719203	56719287	56719245	ENSG00000265070.1	-	miRNA	NOVEL	AC006115.1	1	1	0.346806
chr19	56760933	56761215	56761074	ENSG00000268067.1	+	transcribed_processed_pseudogene	KNOWN	OR5AH1P	1	1	0.256876
chr19	56774552	56840729	56807640	ENSG00000269699.5	-	protein_coding	KNOWN	ZIM2	8	12	-0.022777
chr19	56793048	56793249	56793148	ENSG00000268407.1	-	processed_pseudogene	KNOWN	AC006115.6	1	1	-0.126648
chr19	56810083	56840728	56825405	ENSG00000198300.12	-	protein_coding	KNOWN	PEG3	10	10	0.034044
chr19	56840902	56848556	56844729	ENSG00000268654.1	+	lincRNA	KNOWN	MIMT1	2	2	0.296923
chr19	56840905	56840992	56840948	ENSG00000281440.1	+	sRNA	NOVEL	MIMT1_1	1	1	0.296923
chr19	56848068	56848204	56848136	ENSG00000274777.1	+	misc_RNA	NOVEL	MIMT1_2	1	1	0.296923
chr19	56922018	56922213	56922115	ENSG00000269786.1	+	processed_pseudogene	KNOWN	CTC-258N23.3	1	1	0.209349
chr19	57065334	57066139	57065736	ENSG00000268483.1	+	processed_pseudogene	KNOWN	RPL7AP69	1	1	0.023097
chr19	57111120	57112027	57111573	ENSG00000274219.1	-	unprocessed_pseudogene	KNOWN	CTC-360J11.7	1	1	0.536176
chr19	57119138	57131926	57125532	ENSG00000131864.10	+	protein_coding	KNOWN	USP29	4	4	0.441504
chr19	57134096	57145202	57139649	ENSG00000141946.1	-	protein_coding	KNOWN	ZIM3	1	5	-0.092091
chr19	57150513	57150978	57150745	ENSG00000270293.1	+	processed_pseudogene	KNOWN	CTC-360J11.5	1	1	0.177892
chr19	57151587	57151860	57151723	ENSG00000270790.1	-	processed_pseudogene	KNOWN	CTC-360J11.6	1	1	0.177892
chr19	57154021	57167443	57160732	ENSG00000258873.2	-	protein_coding	KNOWN	DUXA	1	6	0.177892
chr19	57175233	57177921	57176577	ENSG00000268379.1	+	processed_pseudogene	KNOWN	CTC-360J11.4	1	3	0.337971
chr19	57191500	57222846	57207173	ENSG00000083844.10	+	protein_coding	KNOWN	ZNF264	6	5	0.486537
chr19	57230802	57235548	57233175	ENSG00000105146.12	+	protein_coding	KNOWN	AURKC	8	8	0.378749
chr19	57240685	57255135	57247910	ENSG00000204524.6	+	protein_coding	KNOWN	ZNF805	2	4	0.458288
chr19	57261354	57262738	57262046	ENSG00000268713.1	+	lincRNA	KNOWN	CTC-444N24.8	1	1	0.602529
chr19	57267220	57280334	57273777	ENSG00000267871.5	-	antisense	KNOWN	CTC-444N24.6	2	4	0.507333
chr19	57280051	57293569	57286810	ENSG00000197714.8	+	protein_coding	KNOWN	ZNF460	3	3	0.526467
chr19	57293083	57294469	57293776	ENSG00000279541.1	-	TEC	KNOWN	CTC-444N24.7	1	1	0.651114
chr19	57304305	57308562	57306433	ENSG00000268205.1	+	lincRNA	KNOWN	CTC-444N24.11	1	1	0.651114
chr19	57317208	57317562	57317385	ENSG00000268723.1	-	processed_pseudogene	KNOWN	CTC-444N24.9	1	1	0.492530
chr19	57320509	57330776	57325642	ENSG00000178229.7	+	protein_coding	KNOWN	ZNF543	1	4	0.486950
chr19	57350848	57352012	57351430	ENSG00000268678.1	-	antisense	KNOWN	CTC-444N24.13	1	2	0.687843
chr19	57351307	57359898	57355602	ENSG00000131845.14	+	protein_coding	KNOWN	ZNF304	4	4	0.687843
chr19	57363477	57379565	57371521	ENSG00000152433.14	+	protein_coding	KNOWN	ZNF547	4	5	0.643817
chr19	57363511	57365353	57364432	ENSG00000256060.2	+	protein_coding	KNOWN	TRAPPC2P1	2	2	0.687843
chr19	57363566	57398584	57381075	ENSG00000268133.1	+	protein_coding	KNOWN	AC003002.4	1	4	0.583575
chr19	57389850	57402992	57396421	ENSG00000188785.11	+	protein_coding	KNOWN	ZNF548	12	5	0.437053
chr19	57389884	57419994	57404939	ENSG00000269533.5	+	protein_coding	KNOWN	AC003002.6	3	5	0.523301
chr19	57394183	57438457	57416320	ENSG00000268533.1	+	protein_coding	KNOWN	AC004076.7	1	3	0.576994
chr19	57411163	57421939	57416551	ENSG00000186272.12	+	protein_coding	KNOWN	ZNF17	7	4	0.698897
chr19	57435329	57445485	57440407	ENSG00000186230.6	+	protein_coding	KNOWN	ZNF749	4	3	0.554211
chr19	57437970	57477536	57457753	ENSG00000268163.1	-	protein_coding	KNOWN	AC004076.9	3	6	0.476767
chr19	57449689	57453011	57451350	ENSG00000276449.1	+	antisense	KNOWN	AC004076.5	1	1	0.444337
chr19	57454790	57457142	57455966	ENSG00000178201.4	-	protein_coding	KNOWN	VN1R1	1	1	0.433029
chr19	57459912	57460120	57460016	ENSG00000268545.1	+	unprocessed_pseudogene	KNOWN	VN1R107P	1	1	0.433029
chr19	57466663	57477570	57472116	ENSG00000197128.11	-	protein_coding	KNOWN	ZNF772	9	6	0.458156
chr19	57477649	57482996	57480322	ENSG00000268266.1	+	lincRNA	KNOWN	AC003005.2	2	2	0.469227
chr19	57487711	57496097	57491904	ENSG00000105136.19	+	protein_coding	KNOWN	ZNF419	18	5	0.556143
chr19	57487718	57505381	57496549	ENSG00000268107.5	+	protein_coding	KNOWN	AC003005.4	2	4	0.573318
chr19	57499915	57518404	57509159	ENSG00000152439.12	+	protein_coding	KNOWN	ZNF773	6	6	0.564987
chr19	57527325	57557542	57542433	ENSG00000121406.8	+	protein_coding	KNOWN	ZNF549	4	4	0.590968
chr19	57535257	57559863	57547560	ENSG00000251369.8	-	protein_coding	KNOWN	ZNF550	8	6	0.602347
chr19	57571566	57578927	57575246	ENSG00000083817.8	-	protein_coding	KNOWN	ZNF416	1	4	0.738355
chr19	57578456	57593777	57586116	ENSG00000171649.11	+	protein_coding	KNOWN	ZIK1	8	4	0.698137
chr19	57599885	57612722	57606303	ENSG00000183647.10	+	protein_coding	KNOWN	ZNF530	5	4	0.562268
chr19	57614233	57624723	57619478	ENSG00000213762.10	+	protein_coding	KNOWN	ZNF134	5	4	0.514016
chr19	57625032	57626950	57625991	ENSG00000268392.1	+	lincRNA	KNOWN	AC003682.16	1	2	0.514016
chr19	57630395	57642779	57636587	ENSG00000121417.13	+	protein_coding	KNOWN	ZNF211	12	6	0.327737
chr19	57664280	57665039	57664659	ENSG00000269097.1	+	processed_pseudogene	KNOWN	AC003682.17	1	1	0.118223
chr19	57668935	57679152	57674043	ENSG00000180532.10	+	protein_coding	KNOWN	ZSCAN4	2	5	0.242371
chr19	57681969	57717301	57699635	ENSG00000204519.10	+	protein_coding	KNOWN	ZNF551	4	3	0.313757
chr19	57682045	57753575	57717810	ENSG00000269026.2	+	protein_coding	KNOWN	AC003006.7	2	3	0.303813
chr19	57697367	57709194	57703280	ENSG00000179909.15	-	protein_coding	KNOWN	ZNF154	2	5	0.367626
chr19	57719751	57727624	57723687	ENSG00000083814.12	-	protein_coding	KNOWN	ZNF671	7	5	0.228843
chr19	57738465	57738550	57738507	ENSG00000264453.1	+	miRNA	NOVEL	AC003006.1	1	1	0.340339
chr19	57746796	57758159	57752477	ENSG00000152443.12	+	protein_coding	KNOWN	ZNF776	5	3	0.287307
chr19	57769655	57819939	57794797	ENSG00000083828.15	+	protein_coding	KNOWN	ZNF586	6	4	0.710452
chr19	57803841	57814913	57809377	ENSG00000178935.5	-	protein_coding	KNOWN	ZNF552	4	3	0.679876
chr19	57819719	57858941	57839330	ENSG00000268750.6	+	protein_coding	KNOWN	CTD-2583A14.10	6	4	0.712745
chr19	57819741	57846238	57832989	ENSG00000269343.6	+	protein_coding	KNOWN	ZNF587B	3	4	0.687016
chr19	57826461	57826778	57826619	ENSG00000269304.1	-	processed_pseudogene	KNOWN	AC010522.1	1	1	0.728180
chr19	57848731	57889074	57868902	ENSG00000204514.9	-	protein_coding	KNOWN	ZNF814	15	7	0.609141
chr19	57849857	57865112	57857484	ENSG00000198466.11	+	protein_coding	KNOWN	ZNF587	5	3	0.809313
chr19	57867038	57868172	57867605	ENSG00000269867.1	-	sense_intronic	KNOWN	CTD-2583A14.8	1	2	0.810706
chr19	57867885	57868834	57868359	ENSG00000270804.1	+	transcribed_processed_pseudogene	KNOWN	CTD-2583A14.11	2	2	0.810706
chr19	57876765	57916591	57896678	ENSG00000269476.1	-	protein_coding	KNOWN	CTD-2583A14.9	1	6	0.515740
chr19	57900296	57916610	57908453	ENSG00000173480.10	-	protein_coding	KNOWN	ZNF417	7	4	0.555268
chr19	57921884	57935393	57928638	ENSG00000196724.12	-	protein_coding	KNOWN	ZNF418	12	7	0.540778
chr19	57940833	57947675	57944254	ENSG00000152454.3	-	protein_coding	KNOWN	ZNF256	2	3	0.637733
chr19	57953158	57953759	57953458	ENSG00000243234.1	-	processed_pseudogene	KNOWN	CTD-2583A14.1	1	1	0.441066
chr19	57958437	57974534	57966485	ENSG00000177025.3	-	protein_coding	KNOWN	C19orf18	1	6	0.481047
chr19	57977053	58003349	57990201	ENSG00000166704.11	-	protein_coding	KNOWN	ZNF606	9	7	0.445504
chr19	58002061	58011232	58006646	ENSG00000176593.7	+	processed_transcript	KNOWN	CTD-2368P22.1	6	4	0.348031
chr19	58012589	58025926	58019257	ENSG00000235974.1	-	unitary_pseudogene	KNOWN	VN2R19P	1	3	0.578774
chr19	58034032	58054631	58044331	ENSG00000152467.9	+	protein_coding	KNOWN	ZSCAN1	3	6	0.478797
chr19	58044592	58046769	58045680	ENSG00000268660.1	+	processed_pseudogene	KNOWN	LETM1P2	1	1	0.408965
chr19	58049046	58049346	58049196	ENSG00000270837.1	-	processed_pseudogene	KNOWN	HNRNPDLP4	1	1	0.408965
chr19	58059239	58086310	58072774	ENSG00000176293.19	+	protein_coding	KNOWN	ZNF135	6	5	0.551049
chr19	58069970	58070288	58070129	ENSG00000243642.3	+	misc_RNA	KNOWN	RN7SL526P	1	1	0.465413
chr19	58083838	58118427	58101132	ENSG00000121413.12	-	protein_coding	KNOWN	ZSCAN18	17	7	0.446819
chr19	58126252	58155110	58140681	ENSG00000181894.14	-	protein_coding	KNOWN	ZNF329	5	5	0.489562
chr19	58136713	58137054	58136883	ENSG00000268293.1	+	processed_pseudogene	KNOWN	CTD-2623H2.7	1	1	0.516958
chr19	58166166	58167145	58166655	ENSG00000269236.1	+	processed_pseudogene	KNOWN	CTD-2619J13.1	1	1	0.591979
chr19	58183029	58213562	58198295	ENSG00000171606.17	+	protein_coding	KNOWN	ZNF274	14	8	0.574056
chr19	58216180	58216561	58216370	ENSG00000213013.4	+	processed_pseudogene	KNOWN	RPS15AP36	1	1	0.606565
chr19	58224506	58225469	58224987	ENSG00000268866.1	+	processed_pseudogene	KNOWN	AC020915.2	1	1	0.606565
chr19	58228594	58277495	58253044	ENSG00000198131.13	+	protein_coding	KNOWN	ZNF544	20	7	0.772139
chr19	58257270	58278808	58268039	ENSG00000268516.2	-	antisense	KNOWN	CTD-3138B18.5	1	2	0.852288
chr19	58266635	58267685	58267160	ENSG00000268201.1	+	sense_intronic	KNOWN	CTD-3138B18.6	1	2	0.899347
chr19	58278951	58302805	58290878	ENSG00000278129.1	+	protein_coding	KNOWN	ZNF8	1	4	0.800352
chr19	58278966	58315197	58297081	ENSG00000267216.1	+	protein_coding	KNOWN	AC010642.1	1	7	0.805642
chr19	58305319	58315663	58310491	ENSG00000142396.10	+	protein_coding	KNOWN	ERVK3-1	8	4	0.816285
chr19	58310449	58326933	58318691	ENSG00000283103.1	-	antisense	KNOWN	LLNLR-245B6.1	1	5	0.817998
chr19	58310917	58311002	58310959	ENSG00000264333.1	-	miRNA	NOVEL	AC020915.1	1	1	0.817998
chr19	58319277	58320489	58319883	ENSG00000269794.1	+	processed_pseudogene	KNOWN	AC010642.2	1	1	0.817998
chr19	58327019	58342332	58334675	ENSG00000182318.5	+	protein_coding	KNOWN	ZSCAN22	1	3	1.104887
chr19	58334688	58334751	58334719	ENSG00000277588.1	+	miRNA	KNOWN	MIR6806	1	1	1.174207
chr19	58345178	58353499	58349338	ENSG00000121410.11	-	protein_coding	KNOWN	A1BG	5	8	1.191261
chr19	58346854	58362751	58354802	ENSG00000268230.5	-	processed_transcript	KNOWN	CTD-2619J13.8	3	11	1.206731
chr19	58347751	58355183	58351467	ENSG00000268895.5	+	antisense	KNOWN	A1BG-AS1	7	4	1.202488
chr19	58350795	58351720	58351257	ENSG00000279611.1	+	TEC	KNOWN	CTD-2619J13.5	1	1	1.214752
chr19	58354357	58362848	58358602	ENSG00000174586.10	-	protein_coding	KNOWN	ZNF497	3	4	1.214752
chr19	58357999	58359603	58358801	ENSG00000268049.1	+	antisense	KNOWN	CTD-2619J13.9	1	2	1.214752
chr19	58362585	58366591	58364588	ENSG00000269054.1	+	antisense	KNOWN	CTD-2619J13.3	1	3	1.214752
chr19	58363438	58363562	58363500	ENSG00000252211.1	+	rRNA	KNOWN	RNA5SP473	1	1	1.214752
chr19	58367618	58381060	58374339	ENSG00000152475.6	-	protein_coding	KNOWN	ZNF837	2	3	1.140415
chr19	58386400	58394806	58390603	ENSG00000083845.8	+	protein_coding	KNOWN	RPS5	9	7	1.125172
chr19	58386770	58386858	58386814	ENSG00000266640.1	-	miRNA	KNOWN	MIR4754	1	1	1.124413
chr19	58396090	58397079	58396584	ENSG00000269855.2	+	protein_coding	KNOWN	RNF225	1	1	1.125741
chr19	58400221	58400679	58400450	ENSG00000268307.1	+	lincRNA	KNOWN	CTD-2619J13.13	1	1	1.125741
chr19	58401504	58418327	58409915	ENSG00000171574.17	+	protein_coding	KNOWN	ZNF584	9	5	1.104125
chr19	58404238	58408484	58406361	ENSG00000232098.3	-	lincRNA	KNOWN	CTD-2619J13.14	4	2	1.125741
chr19	58418560	58419310	58418935	ENSG00000268543.1	+	TEC	KNOWN	CTD-2619J13.16	1	2	1.082076
chr19	58428632	58431148	58429890	ENSG00000268912.1	-	lincRNA	KNOWN	CTD-2619J13.17	1	1	0.986151
chr19	58432814	58440222	58436518	ENSG00000131849.10	-	protein_coding	KNOWN	ZNF132	2	3	0.872026
chr19	58440448	58445849	58443148	ENSG00000269473.1	+	lincRNA	KNOWN	CTD-2619J13.19	1	1	0.872026
chr19	58451604	58457833	58454718	ENSG00000249471.7	+	protein_coding	KNOWN	ZNF324B	6	5	0.824644
chr19	58467045	58475436	58471240	ENSG00000083812.11	+	protein_coding	KNOWN	ZNF324	4	5	1.075076
chr19	58474017	58481230	58477623	ENSG00000083838.15	+	protein_coding	KNOWN	ZNF446	8	8	1.211139
chr19	58475355	58475763	58475559	ENSG00000269106.1	-	antisense	KNOWN	CTD-2619J13.23	1	1	1.211139
chr19	58479512	58512413	58495962	ENSG00000083807.9	-	protein_coding	KNOWN	SLC27A5	8	10	1.133596
chr19	58483749	58483843	58483796	ENSG00000252334.1	-	snRNA	KNOWN	RNU6-1337P	1	1	1.211139
chr19	58490797	58491075	58490936	ENSG00000265272.2	+	misc_RNA	KNOWN	RN7SL693P	1	1	1.063233
chr19	58500505	58501137	58500821	ENSG00000273901.1	+	antisense	KNOWN	CTD-2619J13.27	1	1	1.063233
chr19	58513530	58538911	58526220	ENSG00000119574.12	-	protein_coding	KNOWN	ZBTB45	5	3	1.244032
chr19	58543299	58543578	58543438	ENSG00000264910.2	-	misc_RNA	KNOWN	RN7SL525P	1	1	0.993344
chr19	58544091	58550722	58547406	ENSG00000130726.11	+	protein_coding	KNOWN	TRIM28	15	17	1.028468
chr19	58550285	58550376	58550330	ENSG00000275924.1	+	miRNA	KNOWN	MIR6807	1	1	1.315480
chr19	58551566	58555124	58553345	ENSG00000130724.8	-	protein_coding	KNOWN	CHMP2A	8	6	1.315480
chr19	58555712	58558960	58557336	ENSG00000130725.7	-	protein_coding	KNOWN	UBE2M	5	7	1.315480
chr19	58559129	58574797	58566963	ENSG00000267858.5	+	antisense	KNOWN	MZF1-AS1	3	6	1.301595
chr19	58561931	58573575	58567753	ENSG00000099326.8	-	protein_coding	KNOWN	MZF1	8	6	1.301555
chr19	58573503	58599801	58586652	ENSG00000213753.10	+	transcribed_processed_pseudogene	KNOWN	CENPBD1P1	8	4	0.969444
chr19	58582024	58582609	58582316	ENSG00000268784.1	+	transcribed_unprocessed_pseudogene	KNOWN	MGC2752	1	1	1.270137
chr19	58586158	58586356	58586257	ENSG00000269032.1	+	transcribed_processed_pseudogene	KNOWN	AC016629.7	1	1	1.270137
chr19	58593896	58599355	58596625	ENSG00000269600.1	-	antisense	KNOWN	AC016629.3	2	3	0.463402
chr1_KI270706v1_random	45986	46062	46024	ENSG00000276560.2	+	miRNA	NOVEL	BX571672.1	1	1	NA
chr1_KI270707v1_random	1649	1731	1690	ENSG00000277905.1	-	miRNA	NOVEL	FP325342.2	1	1	NA
chr1_KI270707v1_random	3928	4011	3969	ENSG00000275028.1	-	miRNA	NOVEL	FP325342.1	1	1	NA
chr1_KI270708v1_random	73355	73437	73396	ENSG00000275983.1	+	miRNA	NOVEL	AL137861.5	1	1	NA
chr1_KI270708v1_random	73549	73629	73589	ENSG00000275032.1	+	miRNA	NOVEL	AL137861.1	1	1	NA
chr1_KI270708v1_random	76499	76581	76540	ENSG00000275913.1	+	miRNA	NOVEL	AL137861.4	1	1	NA
chr1_KI270708v1_random	78349	78432	78390	ENSG00000275357.1	+	miRNA	NOVEL	AL137861.2	1	1	NA
chr1_KI270708v1_random	78589	78672	78630	ENSG00000278225.1	+	miRNA	NOVEL	AL137861.8	1	1	NA
chr1_KI270708v1_random	79929	80010	79969	ENSG00000276585.1	+	miRNA	NOVEL	AL137861.6	1	1	NA
chr1_KI270708v1_random	82519	82601	82560	ENSG00000278286.1	+	miRNA	NOVEL	AL137861.9	1	1	NA
chr1_KI270708v1_random	101274	101357	101315	ENSG00000277432.1	-	miRNA	NOVEL	AL137861.7	1	1	NA
chr1_KI270708v1_random	101524	101607	101565	ENSG00000275435.1	-	miRNA	NOVEL	AL137861.3	1	1	NA
chr1_KI270711v1_random	4612	29626	17119	ENSG00000271254.6	-	protein_coding	NOVEL	AC240274.1	4	21	NA
chr1_KI270713v1_random	21861	22024	21942	ENSG00000275405.1	-	snRNA	NOVEL	U1	1	1	NA
chr1_KI270713v1_random	30437	30580	30508	ENSG00000275987.1	-	snRNA	NOVEL	U1	1	1	NA
chr1_KI270713v1_random	31698	32528	32113	ENSG00000277475.1	-	protein_coding	KNOWN	AC213203.1	1	1	NA
chr1_KI270713v1_random	35407	35916	35661	ENSG00000268674.2	+	protein_coding	KNOWN	FAM231B	1	1	NA
chr1_KI270714v1_random	10309	10381	10345	ENSG00000278033.1	+	miRNA	KNOWN	hsa-mir-3675	1	1	NA
chr2	38814	46870	42842	ENSG00000184731.5	-	protein_coding	KNOWN	FAM110C	3	2	-0.026653
chr2	197569	202605	200087	ENSG00000227061.1	+	antisense	KNOWN	AC079779.7	1	2	-0.085926
chr2	217730	266398	242064	ENSG00000035115.21	-	protein_coding	KNOWN	SH3YL1	29	13	-0.291736
chr2	264140	278283	271211	ENSG00000143727.15	+	protein_coding	KNOWN	ACP1	13	7	-0.188447
chr2	279558	288851	284204	ENSG00000189292.15	-	protein_coding	KNOWN	FAM150B	8	6	0.041366
chr2	286419	301515	293967	ENSG00000228643.1	+	processed_transcript	KNOWN	AC079779.4	2	4	-0.009644
chr2	305111	314367	309739	ENSG00000235779.7	-	lincRNA	KNOWN	AC079779.5	30	5	0.025928
chr2	307683	309424	308553	ENSG00000277997.1	+	lincRNA	KNOWN	RP11-356M6.1	1	2	-0.025502
chr2	317912	342118	330015	ENSG00000233684.2	+	lincRNA	KNOWN	AC079779.6	2	4	-0.098259
chr2	388412	416885	402648	ENSG00000236856.1	+	lincRNA	KNOWN	AC105393.1	1	2	-0.093180
chr2	421057	422303	421680	ENSG00000226277.1	+	lincRNA	KNOWN	AC105393.2	2	2	-0.156396
chr2	490944	492655	491799	ENSG00000223985.1	-	lincRNA	KNOWN	AC093326.1	1	2	-0.153121
chr2	545805	546667	546236	ENSG00000225942.1	+	lincRNA	KNOWN	AC093326.2	1	2	-0.296079
chr2	558204	578145	568174	ENSG00000233633.1	+	lincRNA	KNOWN	AC093326.3	1	5	-0.273977
chr2	667335	677439	672387	ENSG00000151353.14	-	protein_coding	KNOWN	TMEM18	8	6	0.202297
chr2	677186	697371	687278	ENSG00000233296.1	+	antisense	KNOWN	AC092159.2	2	3	0.042315
chr2	687799	688348	688073	ENSG00000280360.1	+	protein_coding	KNOWN	AC092159.1	1	1	0.155070
chr2	692083	693235	692659	ENSG00000233970.1	-	antisense	KNOWN	AC092159.3	1	2	-0.153661
chr2	724966	731224	728095	ENSG00000227713.1	-	lincRNA	KNOWN	AC116609.1	2	2	-0.097809
chr2	739588	740164	739876	ENSG00000272342.1	-	lincRNA	KNOWN	RP13-539J13.1	1	1	0.209485
chr2	741977	749856	745916	ENSG00000231173.1	+	lincRNA	KNOWN	AC116609.3	1	2	0.209485
chr2	742488	747767	745127	ENSG00000223751.1	+	lincRNA	KNOWN	AC116609.2	1	2	0.209485
chr2	779840	868426	824133	ENSG00000237667.5	-	lincRNA	KNOWN	LINC01115	2	4	-0.230474
chr2	900216	905451	902833	ENSG00000228799.5	-	lincRNA	KNOWN	AC113607.2	2	4	-0.176114
chr2	910926	921124	916025	ENSG00000234796.1	-	antisense	KNOWN	AC113607.3	1	2	-0.038207
chr2	949627	950274	949950	ENSG00000235688.2	-	antisense	KNOWN	AC116614.1	1	2	0.064205
chr2	950868	1367613	1159240	ENSG00000172554.11	+	protein_coding	KNOWN	SNTG2	12	17	-0.276790
chr2	1059133	1068341	1063737	ENSG00000235403.1	-	antisense	KNOWN	AC114808.3	1	2	-0.581409
chr2	1158310	1160424	1159367	ENSG00000236665.1	-	antisense	KNOWN	AC114808.2	1	3	-0.320871
chr2	1341044	1346568	1343806	ENSG00000233553.1	-	antisense	KNOWN	AC108462.1	1	2	-0.548680
chr2	1374223	1543711	1458967	ENSG00000115705.20	+	protein_coding	KNOWN	TPO	15	17	-0.113302
chr2	1546665	1620113	1583389	ENSG00000228613.1	-	antisense	KNOWN	AC144450.1	1	3	0.358748
chr2	1572554	1580311	1576432	ENSG00000231482.2	-	lincRNA	KNOWN	AC141930.2	1	2	0.262792
chr2	1620510	1625419	1622964	ENSG00000203635.2	-	lincRNA	KNOWN	AC144450.2	1	2	0.507029
chr2	1631887	1744852	1688369	ENSG00000130508.10	-	protein_coding	KNOWN	PXDN	14	23	0.518171
chr2	1789113	2331260	2060186	ENSG00000186487.17	-	protein_coding	KNOWN	MYT1L	13	25	-0.181475
chr2	1824412	1828667	1826539	ENSG00000232057.1	+	antisense	KNOWN	AC093390.1	1	2	0.430040
chr2	2319232	2327110	2323171	ENSG00000225619.1	+	antisense	KNOWN	MYT1L-AS1	2	2	-0.626494
chr2	2641989	2656630	2649309	ENSG00000234929.1	-	lincRNA	KNOWN	AC018685.1	1	2	-0.044628
chr2	2729908	2730957	2730432	ENSG00000227364.1	-	lincRNA	KNOWN	AC018685.2	1	2	0.151990
chr2	2834264	2838391	2836327	ENSG00000237720.1	-	lincRNA	KNOWN	AC011995.1	1	3	0.069031
chr2	2870558	2871231	2870894	ENSG00000228391.1	-	lincRNA	KNOWN	AC011995.3	1	2	0.114245
chr2	2895048	3126026	3010537	ENSG00000234423.1	-	lincRNA	KNOWN	LINC01250	1	7	-0.179870
chr2	3017219	3017330	3017274	ENSG00000263570.1	-	miRNA	NOVEL	AC074264.1	1	1	-0.345588
chr2	3131581	3145780	3138680	ENSG00000236760.1	-	lincRNA	KNOWN	AC019118.3	2	2	-0.084165
chr2	3156756	3157797	3157276	ENSG00000226649.1	+	lincRNA	KNOWN	AC019118.4	1	3	0.197786
chr2	3188925	3377882	3283403	ENSG00000032389.12	-	protein_coding	KNOWN	TSSC1	14	11	0.213204
chr2	3298341	3301465	3299903	ENSG00000224885.1	-	sense_intronic	KNOWN	TSSC1-IT1	1	2	0.257670
chr2	3379675	3485094	3432384	ENSG00000171853.15	+	protein_coding	KNOWN	TRAPPC12	23	12	0.174585
chr2	3481242	3482409	3481825	ENSG00000225234.1	-	antisense	KNOWN	TRAPPC12-AS1	1	2	0.382963
chr2	3496956	3497428	3497192	ENSG00000271868.1	+	lincRNA	KNOWN	RP11-1293J14.1	1	1	0.329275
chr2	3497361	3519736	3508548	ENSG00000182551.13	-	protein_coding	KNOWN	ADI1	3	4	0.279103
chr2	3519275	3523197	3521236	ENSG00000235078.1	+	antisense	KNOWN	AC142528.1	1	2	0.213982
chr2	3531813	3536873	3534343	ENSG00000242282.6	-	lincRNA	KNOWN	AC108488.4	5	3	0.319884
chr2	3531984	3547957	3539970	ENSG00000255767.1	-	protein_coding	KNOWN	RP13-512J5.1	1	3	0.319884
chr2	3544793	3558616	3551704	ENSG00000171865.9	-	protein_coding	KNOWN	RNASEH1	4	8	0.161419
chr2	3558492	3561745	3560118	ENSG00000234171.2	+	antisense	KNOWN	RNASEH1-AS1	2	3	0.065681
chr2	3575205	3580919	3578062	ENSG00000171863.12	+	protein_coding	KNOWN	RPS7	9	7	0.257482
chr2	3594832	3644644	3619738	ENSG00000118004.17	+	protein_coding	KNOWN	COLEC11	13	8	0.180306
chr2	3603397	3604242	3603819	ENSG00000237370.1	-	antisense	KNOWN	AC010907.2	1	2	0.355026
chr2	3617548	3617757	3617652	ENSG00000188765.7	-	unprocessed_pseudogene	KNOWN	TMSB4XP2	1	1	0.161116
chr2	3658195	3702671	3680433	ENSG00000151360.9	+	protein_coding	KNOWN	ALLC	3	12	0.105717
chr2	3688021	3688981	3688501	ENSG00000232718.1	-	processed_pseudogene	KNOWN	GAPDHP48	1	1	0.230320
chr2	3702585	3704153	3703369	ENSG00000224661.1	-	antisense	KNOWN	AC010907.5	1	2	-0.474498
chr2	3703592	3847408	3775500	ENSG00000214866.7	+	protein_coding	KNOWN	DCDC2C	3	11	-0.230554
chr2	3844184	3847411	3845797	ENSG00000227363.1	+	lincRNA	KNOWN	AC019172.2	1	2	-0.220718
chr2	3957655	3974070	3965862	ENSG00000237401.6	-	lincRNA	KNOWN	LINC01304	11	5	-0.291313
chr2	4136644	4140731	4138687	ENSG00000229550.1	-	lincRNA	KNOWN	AC012445.1	1	3	-0.156507
chr2	4228428	4228518	4228473	ENSG00000215960.2	-	miRNA	NOVEL	AC068292.1	1	1	-0.325999
chr2	4514204	4515056	4514630	ENSG00000231821.1	-	processed_pseudogene	KNOWN	NPM1P48	1	1	-0.593900
chr2	4628222	4656215	4642218	ENSG00000231532.5	-	lincRNA	KNOWN	LINC01249	3	5	-0.748144
chr2	4827001	4827084	4827042	ENSG00000252238.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.739737
chr2	4945277	4945383	4945330	ENSG00000207192.1	+	snRNA	KNOWN	RNU6-649P	1	1	-0.231846
chr2	5313740	5314134	5313937	ENSG00000228585.1	-	processed_pseudogene	KNOWN	AC073143.1	1	1	-0.201739
chr2	5549780	5556031	5552905	ENSG00000232835.1	-	lincRNA	KNOWN	AC107057.1	1	2	-0.160361
chr2	5602505	5691488	5646996	ENSG00000224128.1	-	antisense	KNOWN	LINC01248	1	2	-0.255460
chr2	5618327	5691118	5654722	ENSG00000230090.5	-	processed_transcript	KNOWN	AC108025.2	2	7	-0.278755
chr2	5692667	5701385	5697026	ENSG00000176887.6	+	protein_coding	KNOWN	SOX11	1	1	-0.367440
chr2	5696220	5708095	5702157	ENSG00000242540.2	+	3prime_overlapping_ncrna	KNOWN	AC010729.1	1	4	-0.367440
chr2	5726449	5730342	5728395	ENSG00000236106.1	+	lincRNA	KNOWN	AC010729.2	1	2	-0.190963
chr2	5810641	5812596	5811618	ENSG00000237266.1	-	lincRNA	KNOWN	AC010729.3	1	4	-0.736242
chr2	5932687	6001275	5966981	ENSG00000232044.6	+	processed_transcript	KNOWN	LINC01105	7	5	-0.258509
chr2	5974662	5974732	5974697	ENSG00000276733.1	+	miRNA	KNOWN	MIR7158	1	1	-0.499923
chr2	6312954	6325646	6319300	ENSG00000234275.1	-	lincRNA	KNOWN	AC017053.1	1	3	-0.315351
chr2	6366010	6375422	6370716	ENSG00000227007.1	-	lincRNA	KNOWN	LINC01247	1	3	-0.424531
chr2	6495877	6496798	6496337	ENSG00000231610.1	-	processed_pseudogene	KNOWN	AC021021.1	1	1	-0.496426
chr2	6496003	6503806	6499904	ENSG00000226488.1	+	lincRNA	KNOWN	AC021021.2	1	3	-0.496426
chr2	6615389	6650535	6632962	ENSG00000236172.6	-	lincRNA	KNOWN	MIR7515HG	67	9	-0.594657
chr2	6728177	6770311	6749244	ENSG00000205837.7	-	lincRNA	KNOWN	LINC00487	3	6	-0.091684
chr2	6828514	6840464	6834489	ENSG00000225964.5	-	antisense	KNOWN	NRIR	2	4	-0.289690
chr2	6840570	6866635	6853602	ENSG00000134326.11	-	protein_coding	KNOWN	CMPK2	7	5	-0.140859
chr2	6855090	6855177	6855133	ENSG00000220999.3	-	miRNA	NOVEL	AC017076.1	1	1	-0.034226
chr2	6865806	6898239	6882022	ENSG00000134321.11	+	protein_coding	KNOWN	RSAD2	5	6	-0.324316
chr2	6905724	6906301	6906012	ENSG00000271947.1	-	lincRNA	KNOWN	RP11-439M11.1	1	1	-0.673543
chr2	6912277	6918709	6915493	ENSG00000228203.6	-	processed_transcript	KNOWN	RNF144A-AS1	5	5	-0.098111
chr2	6917392	7068286	6992839	ENSG00000151692.14	+	protein_coding	KNOWN	RNF144A	7	9	-0.196296
chr2	7062727	7077880	7070303	ENSG00000223884.5	-	antisense	KNOWN	AC019048.1	2	3	-0.249924
chr2	7141227	7141544	7141385	ENSG00000223145.1	-	misc_RNA	KNOWN	RN7SKP112	1	1	-0.083375
chr2	7260871	7261504	7261187	ENSG00000272002.1	+	lincRNA	KNOWN	RP11-557L19.1	1	1	-0.500350
chr2	7324748	7325062	7324905	ENSG00000213774.3	-	processed_pseudogene	KNOWN	AC010904.1	1	1	-0.810711
chr2	7421261	7450254	7435757	ENSG00000229727.6	+	processed_transcript	KNOWN	AC013460.1	6	7	-0.545475
chr2	7576841	7576971	7576906	ENSG00000221255.1	+	snRNA	KNOWN	RNU6ATAC37P	1	1	-0.315184
chr2	7671604	7672246	7671925	ENSG00000230515.1	-	lincRNA	KNOWN	AC092580.3	1	2	-0.328226
chr2	7725801	7730705	7728253	ENSG00000235576.1	+	lincRNA	KNOWN	AC092580.4	1	2	0.209314
chr2	7735645	7735783	7735714	ENSG00000232979.1	-	processed_pseudogene	KNOWN	AC092580.2	1	1	0.013565
chr2	7736438	7737095	7736766	ENSG00000229405.1	-	processed_pseudogene	KNOWN	AC092580.1	1	1	0.013565
chr2	7886770	7899655	7893212	ENSG00000226506.5	-	lincRNA	KNOWN	AC007463.2	2	6	0.096357
chr2	7922425	8278084	8100254	ENSG00000235665.5	-	lincRNA	KNOWN	LINC00298	2	4	-0.072186
chr2	8007771	8383621	8195696	ENSG00000236790.5	-	lincRNA	KNOWN	LINC00299	4	10	-0.018358
chr2	8139402	8143269	8141335	ENSG00000229740.1	+	lincRNA	KNOWN	U91324.1	1	2	0.005008
chr2	8543592	8575501	8559546	ENSG00000231435.1	-	lincRNA	KNOWN	AC011747.3	1	3	0.345258
chr2	8559833	8583792	8571812	ENSG00000236008.1	-	lincRNA	KNOWN	AC011747.4	2	6	0.161134
chr2	8600892	8622942	8611917	ENSG00000231083.1	-	lincRNA	KNOWN	AC011747.6	1	3	0.035987
chr2	8603082	8603359	8603220	ENSG00000225642.1	+	processed_pseudogene	KNOWN	SNRPEP5	1	1	0.121286
chr2	8666636	8681863	8674249	ENSG00000235092.5	-	antisense	KNOWN	ID2-AS1	7	4	0.155495
chr2	8678845	8684453	8681649	ENSG00000115738.9	+	protein_coding	KNOWN	ID2	4	5	0.155495
chr2	8721134	8722686	8721910	ENSG00000260837.1	-	lincRNA	KNOWN	RP11-434B12.1	1	1	0.045198
chr2	8725278	8837630	8781454	ENSG00000134313.14	-	protein_coding	KNOWN	KIDINS220	12	30	-0.188040
chr2	8852690	9003813	8928251	ENSG00000143797.11	-	protein_coding	KNOWN	MBOAT2	10	13	-0.032729
chr2	9018293	9018899	9018596	ENSG00000230886.3	-	processed_pseudogene	KNOWN	HMGB1P25	1	1	-0.258289
chr2	9081395	9081727	9081561	ENSG00000223640.1	-	processed_pseudogene	KNOWN	RPL30P3	1	1	0.014455
chr2	9103440	9105114	9104277	ENSG00000242136.1	+	processed_transcript	KNOWN	RP11-734K21.2	2	3	0.099769
chr2	9106593	9109865	9108229	ENSG00000261104.1	+	lincRNA	KNOWN	RP11-734K21.5	1	1	0.099769
chr2	9115197	9116884	9116040	ENSG00000244310.1	+	lincRNA	KNOWN	RP11-734K21.3	1	2	0.234503
chr2	9143166	9146106	9144636	ENSG00000240980.1	+	lincRNA	KNOWN	RP11-734K21.4	1	3	0.036344
chr2	9206765	9405683	9306224	ENSG00000151693.9	+	protein_coding	KNOWN	ASAP2	5	28	0.256416
chr2	9271292	9271628	9271460	ENSG00000213772.3	-	processed_pseudogene	KNOWN	EIF1P7	1	1	0.365640
chr2	9403475	9423547	9413511	ENSG00000119185.12	-	protein_coding	KNOWN	ITGB1BP1	21	8	0.302449
chr2	9423568	9473101	9448334	ENSG00000119203.13	+	protein_coding	KNOWN	CPSF3	5	18	0.394628
chr2	9473658	9496543	9485100	ENSG00000134330.18	+	protein_coding	KNOWN	IAH1	15	7	0.078231
chr2	9488486	9555792	9522139	ENSG00000151694.12	-	protein_coding	KNOWN	ADAM17	4	19	0.092116
chr2	9505445	9512412	9508928	ENSG00000239300.5	+	antisense	KNOWN	RP11-400L8.2	2	3	0.179874
chr2	9555899	9556775	9556337	ENSG00000271855.1	+	lincRNA	KNOWN	RP11-214N9.1	1	1	0.382211
chr2	9583972	9631014	9607493	ENSG00000134308.13	-	protein_coding	KNOWN	YWHAQ	5	6	0.058589
chr2	9615267	9615373	9615320	ENSG00000207086.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.050613
chr2	9638772	9649439	9644105	ENSG00000240687.1	+	lincRNA	KNOWN	RP11-521D12.1	1	3	0.159807
chr2	9674023	9708413	9691218	ENSG00000244260.1	+	lincRNA	KNOWN	RP11-521D12.2	1	5	0.558886
chr2	9740643	9740783	9740713	ENSG00000200034.1	-	snRNA	KNOWN	RNU4-73P	1	1	0.222300
chr2	9746704	9746869	9746786	ENSG00000240960.1	+	processed_pseudogene	KNOWN	RP11-521D12.4	1	1	0.222300
chr2	9757496	9770341	9763918	ENSG00000243491.1	-	lincRNA	KNOWN	RP11-521D12.5	1	2	0.633193
chr2	9843354	9934416	9888885	ENSG00000115750.16	+	protein_coding	KNOWN	TAF1B	11	15	-0.107379
chr2	9936360	9939590	9937975	ENSG00000269973.1	+	lincRNA	KNOWN	RP11-95D17.1	1	1	-0.075244
chr2	9951693	10002277	9976985	ENSG00000134317.17	+	protein_coding	KNOWN	GRHL1	8	16	0.041011
chr2	10003158	10006030	10004594	ENSG00000188525.3	-	antisense	KNOWN	AC010969.1	1	2	0.200633
chr2	10021578	10022825	10022201	ENSG00000260476.1	+	lincRNA	KNOWN	RP11-254F7.1	1	1	0.336411
chr2	10039092	10040663	10039877	ENSG00000260077.1	-	lincRNA	KNOWN	RP11-254F7.2	1	1	0.751567
chr2	10042849	10054836	10048842	ENSG00000172059.10	+	protein_coding	KNOWN	KLF11	6	4	0.528988
chr2	10054421	10054866	10054643	ENSG00000271787.1	-	antisense	KNOWN	RP11-254F7.3	1	1	0.199974
chr2	10056780	10080944	10068862	ENSG00000205795.4	-	protein_coding	KNOWN	CYS1	2	3	0.236563
chr2	10083781	10086101	10084941	ENSG00000233502.1	+	lincRNA	KNOWN	AC104794.4	1	3	0.280753
chr2	10090205	10090319	10090262	ENSG00000212558.1	-	snoRNA	NOVEL	SNORA26	1	1	0.403453
chr2	10120734	10121065	10120899	ENSG00000272524.1	+	lincRNA	KNOWN	RP11-254F7.4	1	1	0.253455
chr2	10122328	10131419	10126873	ENSG00000171848.13	+	protein_coding	KNOWN	RRM2	11	10	0.271987
chr2	10141382	10211725	10176553	ENSG00000163009.8	+	lincRNA	KNOWN	C2orf48	2	4	0.453834
chr2	10155072	10155206	10155139	ENSG00000206647.1	-	snoRNA	NOVEL	SNORA2	1	1	0.280601
chr2	10192614	10192671	10192642	ENSG00000265418.1	-	miRNA	KNOWN	MIR4261	1	1	0.748037
chr2	10280628	10280891	10280759	ENSG00000264030.2	+	misc_RNA	KNOWN	RN7SL66P	1	1	0.613071
chr2	10296047	10296180	10296113	ENSG00000206898.1	-	snoRNA	NOVEL	SNORA51	1	1	0.496919
chr2	10302889	10427617	10365253	ENSG00000115756.12	+	protein_coding	KNOWN	HPCAL1	8	8	0.487481
chr2	10439968	10448504	10444236	ENSG00000115758.12	-	protein_coding	KNOWN	ODC1	4	12	0.528091
chr2	10446714	10446849	10446781	ENSG00000206633.1	-	snoRNA	KNOWN	SNORA80B	1	1	0.528091
chr2	10448694	10451327	10450010	ENSG00000257135.5	+	lincRNA	KNOWN	RP11-320M2.1	2	4	0.405301
chr2	10452319	10455552	10453935	ENSG00000217258.2	+	lincRNA	KNOWN	AC007249.3	1	4	0.284637
chr2	10570766	10689987	10630376	ENSG00000115761.15	-	protein_coding	KNOWN	NOL10	5	21	0.144787
chr2	10589166	10604830	10596998	ENSG00000234818.1	+	antisense	KNOWN	AC092687.5	1	4	0.234825
chr2	10690344	10692099	10691221	ENSG00000243819.4	+	lincRNA	KNOWN	RN7SL832P	1	1	0.374800
chr2	10691538	10691831	10691684	ENSG00000277446.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.374800
chr2	10717773	10720952	10719362	ENSG00000236162.1	+	lincRNA	KNOWN	AC092687.3	1	5	0.035408
chr2	10721649	10785110	10753379	ENSG00000143882.10	+	protein_coding	KNOWN	ATP6V1C2	4	14	0.302332
chr2	10744186	10744249	10744217	ENSG00000239053.1	+	snRNA	KNOWN	RNU7-138P	1	1	0.351751
chr2	10767875	10770058	10768966	ENSG00000272275.1	-	lincRNA	KNOWN	RP11-791G15.2	1	3	0.099759
chr2	10783391	10837977	10810684	ENSG00000143870.12	-	protein_coding	KNOWN	PDIA6	8	15	0.200145
chr2	10815485	10815546	10815515	ENSG00000238962.1	-	snRNA	KNOWN	RNU7-176P	1	1	-0.097042
chr2	10847577	10854955	10851266	ENSG00000232056.1	+	lincRNA	KNOWN	AC092687.4	1	3	0.217155
chr2	10874291	10874567	10874429	ENSG00000270488.1	-	processed_pseudogene	KNOWN	RP11-245G13.1	1	1	0.286720
chr2	10878269	10885118	10881693	ENSG00000271952.1	+	lincRNA	KNOWN	RP11-245G13.2	1	2	0.286720
chr2	10911937	10914225	10913081	ENSG00000162975.4	+	protein_coding	KNOWN	KCNF1	1	1	0.519629
chr2	11102142	11102997	11102569	ENSG00000226080.1	+	processed_pseudogene	KNOWN	RP11-345J13.1	1	1	-0.061814
chr2	11105317	11132821	11119069	ENSG00000145063.14	-	lincRNA	KNOWN	AC062028.1	5	8	-0.012132
chr2	11133053	11146790	11139921	ENSG00000150873.11	+	protein_coding	KNOWN	C2orf50	2	4	0.281710
chr2	11155198	11178874	11167036	ENSG00000162976.12	+	protein_coding	KNOWN	PQLC3	10	8	0.350782
chr2	11179761	11348330	11264045	ENSG00000134318.13	-	protein_coding	KNOWN	ROCK2	9	33	-0.119743
chr2	11233988	11234094	11234041	ENSG00000207267.1	+	snRNA	KNOWN	RNU6-1081P	1	1	-0.252656
chr2	11308025	11308941	11308483	ENSG00000230154.1	+	processed_pseudogene	KNOWN	AC018463.4	1	1	-0.063286
chr2	11322048	11322182	11322115	ENSG00000281867.1	-	miRNA	NOVEL	AC018463.1	1	1	-0.120815
chr2	11351627	11352118	11351872	ENSG00000226961.3	+	processed_pseudogene	KNOWN	AC018463.5	1	1	0.294381
chr2	11357515	11365636	11361575	ENSG00000230952.1	-	lincRNA	KNOWN	AC099344.2	1	2	0.294381
chr2	11388023	11390367	11389195	ENSG00000231403.1	-	lincRNA	KNOWN	AC099344.3	1	3	0.058788
chr2	11393981	11403077	11398529	ENSG00000224177.6	+	lincRNA	KNOWN	LINC00570	4	4	0.137316
chr2	11444375	11466177	11455276	ENSG00000169016.16	-	protein_coding	KNOWN	E2F6	12	9	0.165422
chr2	11482341	11642788	11562564	ENSG00000196208.13	+	protein_coding	KNOWN	GREB1	10	33	0.033044
chr2	11517397	11517503	11517450	ENSG00000201610.1	+	rRNA	KNOWN	RNA5SP84	1	1	-0.182371
chr2	11540605	11540677	11540641	ENSG00000264010.1	-	miRNA	KNOWN	MIR4429	1	1	0.135319
chr2	11561194	11561306	11561250	ENSG00000251718.1	+	snRNA	KNOWN	RNU2-13P	1	1	-0.307473
chr2	11561661	11561779	11561720	ENSG00000202248.1	-	rRNA	KNOWN	RNA5SP85	1	1	-0.307473
chr2	11584773	11585047	11584910	ENSG00000239899.3	+	misc_RNA	KNOWN	RN7SL674P	1	1	0.178148
chr2	11607404	11607505	11607454	ENSG00000265583.1	+	miRNA	NOVEL	AC011994.1	1	1	0.370147
chr2	11658178	11670164	11664171	ENSG00000169006.6	-	protein_coding	KNOWN	NTSR2	1	4	-0.130589
chr2	11665369	11665969	11665669	ENSG00000230044.1	-	processed_pseudogene	KNOWN	AC110754.3	1	1	-0.136485
chr2	11673964	11676925	11675444	ENSG00000276411.1	-	lincRNA	KNOWN	RP11-494G9.1	1	2	0.291832
chr2	11677595	11827409	11752502	ENSG00000134324.11	+	protein_coding	KNOWN	LPIN1	19	22	0.141127
chr2	11681460	11683328	11682394	ENSG00000228496.1	+	sense_intronic	KNOWN	AC106875.1	2	2	0.291832
chr2	11721619	11724222	11722920	ENSG00000203643.3	-	antisense	KNOWN	AC012456.3	1	2	0.187751
chr2	11740997	11745301	11743149	ENSG00000230790.2	-	antisense	KNOWN	AC012456.4	1	3	0.124053
chr2	11767444	11767525	11767484	ENSG00000265056.1	+	miRNA	KNOWN	MIR548S	1	1	0.444873
chr2	11836933	11836986	11836959	ENSG00000265172.1	-	miRNA	KNOWN	MIR4262	1	1	0.251190
chr2	11848622	12578348	12213485	ENSG00000224184.5	+	lincRNA	KNOWN	MIR3681HG	7	6	-0.157006
chr2	12030303	12030372	12030337	ENSG00000238503.1	-	snoRNA	NOVEL	SNORD18	1	1	0.040593
chr2	12199130	12199201	12199165	ENSG00000264089.1	+	miRNA	KNOWN	MIR3681	1	1	-0.080069
chr2	12411398	12411501	12411449	ENSG00000207183.1	-	snRNA	KNOWN	RNU6-843P	1	1	-0.207568
chr2	12598987	12605145	12602066	ENSG00000223360.1	+	lincRNA	KNOWN	AC096559.2	1	4	-0.226456
chr2	12715415	12716227	12715821	ENSG00000261117.1	+	lincRNA	KNOWN	RP11-333O1.1	1	1	-0.073498
chr2	12716889	12742734	12729811	ENSG00000071575.11	+	protein_coding	KNOWN	TRIB2	4	3	0.032283
chr2	12737367	12737444	12737405	ENSG00000264370.1	+	miRNA	KNOWN	MIR3125	1	1	0.141179
chr2	12966784	13007013	12986898	ENSG00000225649.5	-	processed_transcript	KNOWN	AC064875.2	4	6	-0.523413
chr2	13537673	13609168	13573420	ENSG00000229370.1	+	lincRNA	KNOWN	AC092635.1	1	2	-0.742570
chr2	13710531	14400963	14055747	ENSG00000230448.5	-	lincRNA	KNOWN	LINC00276	2	5	-0.583536
chr2	13723048	13758152	13740600	ENSG00000227718.1	+	lincRNA	KNOWN	AC016730.1	1	3	-0.301308
chr2	13839140	13839246	13839193	ENSG00000277503.1	-	miRNA	NOVEL	AC016730.2	1	1	-0.533328
chr2	14274622	14274725	14274673	ENSG00000251859.1	-	snRNA	KNOWN	RNU6-1288P	1	1	-0.237316
chr2	14341178	14341259	14341218	ENSG00000280595.1	+	miRNA	NOVEL	AC064846.1	1	1	-0.600580
chr2	14530941	14531223	14531082	ENSG00000237261.2	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.323046
chr2	14616428	14630192	14623310	ENSG00000228505.5	+	lincRNA	KNOWN	AC011897.2	2	3	-0.423692
chr2	14632686	14650814	14641750	ENSG00000162981.13	+	protein_coding	KNOWN	FAM84A	4	6	-0.304245
chr2	14886647	14907664	14897155	ENSG00000235127.1	-	lincRNA	KNOWN	AC068286.1	1	3	-0.338283
chr2	15166909	15561330	15364119	ENSG00000151779.12	-	protein_coding	KNOWN	NBAS	9	52	-0.295982
chr2	15397435	15397782	15397608	ENSG00000229087.1	-	processed_pseudogene	KNOWN	RP11-32P22.1	1	1	-0.610464
chr2	15564170	15573868	15569019	ENSG00000234022.1	+	antisense	KNOWN	AC008278.2	1	4	-0.204330
chr2	15591178	15631111	15611144	ENSG00000079785.14	+	protein_coding	KNOWN	DDX1	8	27	-0.151823
chr2	15668684	15680484	15674584	ENSG00000224194.1	-	antisense	KNOWN	AC008278.3	1	3	-0.090046
chr2	15690782	15744339	15717560	ENSG00000231031.6	+	lincRNA	KNOWN	AC008271.1	3	6	0.087451
chr2	15801747	15810877	15806312	ENSG00000237326.1	-	lincRNA	KNOWN	AC113608.1	1	2	0.161311
chr2	15864935	15865051	15864993	ENSG00000202160.1	+	snRNA	KNOWN	RNU5E-7P	1	1	-0.155936
chr2	15869939	15870243	15870091	ENSG00000214657.4	+	processed_pseudogene	KNOWN	RP11-120J4.1	1	1	-0.153215
chr2	15903669	15903772	15903720	ENSG00000238371.1	+	snoRNA	NOVEL	snoU13	1	1	-0.221425
chr2	15920399	15936017	15928208	ENSG00000223850.1	+	lincRNA	KNOWN	MYCNUT	1	3	-0.250560
chr2	15921037	15942249	15931643	ENSG00000233718.5	-	antisense	KNOWN	MYCNOS	5	4	-0.244112
chr2	15940564	15947007	15943785	ENSG00000134323.10	+	protein_coding	KNOWN	MYCN	1	3	-0.229936
chr2	15950689	15950981	15950835	ENSG00000243541.3	-	misc_RNA	KNOWN	RN7SL104P	1	1	0.017138
chr2	15997049	16062885	16029967	ENSG00000226764.2	-	lincRNA	KNOWN	AC010145.4	1	3	-0.032822
chr2	16050427	16085801	16068114	ENSG00000236289.2	+	lincRNA	KNOWN	GACAT3	2	4	0.022361
chr2	16085222	16105841	16095531	ENSG00000236989.5	-	lincRNA	KNOWN	AC142119.1	2	4	-0.159547
chr2	16149251	16149394	16149322	ENSG00000271315.1	+	processed_pseudogene	KNOWN	WI2-2221J1.1	1	1	-0.296079
chr2	16199203	16199295	16199249	ENSG00000251704.1	+	snoRNA	NOVEL	SNORA40	1	1	-0.257244
chr2	16202430	16204226	16203328	ENSG00000226041.1	+	lincRNA	KNOWN	AC010745.1	1	3	-0.257244
chr2	16224047	16229140	16226593	ENSG00000228876.1	+	lincRNA	KNOWN	AC010745.2	1	3	0.009998
chr2	16227027	16228194	16227610	ENSG00000231266.1	-	lincRNA	KNOWN	AC010745.3	1	2	0.009998
chr2	16316324	16319566	16317945	ENSG00000232444.1	-	lincRNA	KNOWN	AC010745.4	1	2	-0.284978
chr2	16354256	16432702	16393479	ENSG00000224400.5	+	lincRNA	KNOWN	AC010880.1	2	4	-0.426752
chr2	16523176	16529387	16526281	ENSG00000237633.2	+	antisense	KNOWN	AC104623.2	2	3	-0.289437
chr2	16541690	16545695	16543692	ENSG00000279663.2	-	TEC	KNOWN	RP11-542H15.1	2	2	-0.333099
chr2	16549459	16666331	16607895	ENSG00000197872.11	-	protein_coding	KNOWN	FAM49A	5	13	-0.269462
chr2	16728124	16767555	16747839	ENSG00000223536.5	+	lincRNA	KNOWN	AC008069.1	2	3	-0.262272
chr2	16853820	16855284	16854552	ENSG00000224604.1	-	processed_pseudogene	KNOWN	AC008069.2	1	2	-0.268184
chr2	16970034	16974497	16972265	ENSG00000237670.1	+	lincRNA	KNOWN	AC080094.1	1	3	-0.304898
chr2	17122841	17123140	17122990	ENSG00000222842.1	-	misc_RNA	KNOWN	RN7SKP168	1	1	-0.877635
chr2	17284292	17284895	17284593	ENSG00000214843.3	+	processed_pseudogene	KNOWN	ZFYVE9P2	1	1	-0.325999
chr2	17385091	17386417	17385754	ENSG00000236348.1	+	processed_pseudogene	KNOWN	PSMC1P10	1	1	-0.444061
chr2	17510584	17518439	17514511	ENSG00000214842.5	-	protein_coding	KNOWN	RAD51AP2	1	3	-0.927117
chr2	17539126	17657018	17598072	ENSG00000163032.11	+	protein_coding	KNOWN	VSNL1	6	4	-0.380127
chr2	17663812	17800242	17732027	ENSG00000163029.15	-	protein_coding	KNOWN	SMC6	10	30	-0.412635
chr2	17753858	17788941	17771399	ENSG00000178295.14	+	protein_coding	KNOWN	GEN1	8	14	-0.412770
chr2	17816496	17817101	17816798	ENSG00000151379.3	+	protein_coding	KNOWN	MSGN1	1	1	-0.220221
chr2	17877847	18361616	18119731	ENSG00000170745.11	+	protein_coding	KNOWN	KCNS3	5	5	-0.319746
chr2	18040606	18040733	18040669	ENSG00000212455.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.916276
chr2	18547386	18548204	18547795	ENSG00000260331.1	-	lincRNA	KNOWN	RP11-111J6.2	1	1	-0.007018
chr2	18554723	18560680	18557701	ENSG00000240857.1	-	protein_coding	KNOWN	RDH14	2	2	-0.355467
chr2	18555545	18589564	18572554	ENSG00000250741.6	-	protein_coding	KNOWN	NT5C1B-RDH14	2	11	-0.266509
chr2	18562872	18589572	18576222	ENSG00000185013.16	-	protein_coding	KNOWN	NT5C1B	7	10	-0.242078
chr2	18583367	18583468	18583417	ENSG00000207170.1	-	snRNA	KNOWN	RNU6-1215P	1	1	-0.200790
chr2	18784807	18787752	18786279	ENSG00000224626.1	+	lincRNA	KNOWN	AC106053.1	1	2	-0.264943
chr2	18986451	19346748	19166599	ENSG00000236204.5	-	lincRNA	KNOWN	LINC01376	4	5	-0.215639
chr2	19348429	19348505	19348467	ENSG00000266738.1	+	miRNA	KNOWN	MIR4757	1	1	-0.385055
chr2	19351485	19358653	19355069	ENSG00000143867.6	-	protein_coding	KNOWN	OSR1	3	3	0.222839
chr2	19458220	19468961	19463590	ENSG00000234597.1	-	lincRNA	KNOWN	AC010096.1	1	2	-0.191801
chr2	19475450	19488850	19482150	ENSG00000237992.1	+	lincRNA	KNOWN	AC010096.2	1	3	-0.382327
chr2	19711715	19717576	19714645	ENSG00000235911.1	+	lincRNA	KNOWN	AC019055.1	1	2	0.034276
chr2	19826249	19826575	19826412	ENSG00000213403.2	+	processed_pseudogene	KNOWN	CISD1P1	1	1	0.282747
chr2	19868860	19885047	19876953	ENSG00000228784.7	+	lincRNA	KNOWN	LINC00954	4	10	0.432046
chr2	19896643	19901986	19899314	ENSG00000183891.5	-	protein_coding	KNOWN	TTC32	4	3	-0.153121
chr2	19902025	19902569	19902297	ENSG00000271991.1	+	lincRNA	KNOWN	RP11-79O8.1	1	1	-0.153121
chr2	19910260	19990131	19950195	ENSG00000118965.14	-	protein_coding	KNOWN	WDR35	6	28	-0.353235
chr2	19990217	20004210	19997213	ENSG00000227210.1	+	antisense	KNOWN	AC079145.4	1	3	0.057016
chr2	19992111	20012694	20002402	ENSG00000132031.12	-	protein_coding	KNOWN	MATN3	3	8	0.104931
chr2	20032650	20052028	20042339	ENSG00000068697.6	-	protein_coding	KNOWN	LAPTM4A	2	7	0.293251
chr2	20052134	20054496	20053315	ENSG00000223734.2	+	lincRNA	KNOWN	RP11-644K8.1	1	2	0.134056
chr2	20063856	20106829	20085342	ENSG00000234378.1	-	lincRNA	KNOWN	AC098828.2	1	2	0.152717
chr2	20155618	20156057	20155837	ENSG00000213729.3	-	processed_pseudogene	KNOWN	AC098828.3	1	1	0.165992
chr2	20175346	20175639	20175492	ENSG00000266059.2	+	misc_RNA	KNOWN	RN7SL140P	1	1	0.449754
chr2	20175805	20175909	20175857	ENSG00000200763.1	+	snRNA	KNOWN	RNU6-961P	1	1	0.449754
chr2	20200797	20225433	20213115	ENSG00000115884.10	-	protein_coding	KNOWN	SDC1	6	6	0.454983
chr2	20239892	20241046	20240469	ENSG00000235411.1	-	processed_pseudogene	KNOWN	AC007041.2	1	1	0.305166
chr2	20246326	20246387	20246356	ENSG00000238735.1	-	snRNA	KNOWN	RNU7-113P	1	1	0.305166
chr2	20248691	20352234	20300462	ENSG00000055917.15	-	protein_coding	KNOWN	PUM2	11	21	-0.126898
chr2	20386386	20396588	20391487	ENSG00000232800.1	+	unitary_pseudogene	KNOWN	SLC7A15P	1	6	0.114988
chr2	20401627	20401724	20401675	ENSG00000212171.1	-	rRNA	KNOWN	RNA5SP86	1	1	0.215820
chr2	20401650	20401706	20401678	ENSG00000281337.1	-	miRNA	NOVEL	AC007041.1	1	1	0.215820
chr2	20447074	20449445	20448259	ENSG00000143878.9	+	protein_coding	KNOWN	RHOB	1	1	0.107505
chr2	20451042	20452947	20451994	ENSG00000228950.1	+	lincRNA	KNOWN	AC023137.2	1	2	0.272564
chr2	20480844	20480955	20480899	ENSG00000200829.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.320469
chr2	20499571	20501311	20500441	ENSG00000227047.1	-	lincRNA	KNOWN	AC012065.4	1	2	0.157415
chr2	20529467	20529976	20529721	ENSG00000279307.2	-	processed_pseudogene	KNOWN	RP11-130L8.3	1	1	0.384443
chr2	20560448	20651089	20605768	ENSG00000118960.12	-	protein_coding	KNOWN	HS1BP3	8	7	0.504437
chr2	20586248	20586686	20586467	ENSG00000269976.1	-	lincRNA	KNOWN	RP11-130L8.2	1	1	0.416665
chr2	20590775	20592548	20591661	ENSG00000231948.2	-	sense_intronic	KNOWN	HS1BP3-IT1	1	2	0.871866
chr2	20606280	20606654	20606467	ENSG00000233416.1	-	processed_pseudogene	KNOWN	AC012065.5	1	1	0.871866
chr2	20666664	20679245	20672954	ENSG00000143869.6	+	protein_coding	KNOWN	GDF7	1	2	0.291921
chr2	20678254	20678932	20678593	ENSG00000270100.1	-	lincRNA	KNOWN	RP11-130L8.1	1	1	0.341351
chr2	20684014	20823130	20753572	ENSG00000118961.14	-	protein_coding	KNOWN	LDAH	13	9	-0.206718
chr2	20859771	20861661	20860716	ENSG00000236436.1	+	lincRNA	KNOWN	AC012361.1	1	2	-0.065888
chr2	20999313	21000917	21000115	ENSG00000261012.2	-	lincRNA	KNOWN	RP11-116D2.1	1	1	-0.258695
chr2	21001429	21044073	21022751	ENSG00000084674.13	-	protein_coding	KNOWN	APOB	3	30	-0.278661
chr2	21023496	21024170	21023833	ENSG00000280390.1	+	TEC	KNOWN	AC010872.1	1	1	-0.412481
chr2	21123917	21143272	21133594	ENSG00000218819.4	+	protein_coding	KNOWN	TDRD15	2	4	-0.408336
chr2	21198518	21198896	21198707	ENSG00000271629.1	-	processed_pseudogene	KNOWN	RP11-79J24.1	1	1	-0.603154
chr2	21221175	21970959	21596067	ENSG00000233005.1	+	lincRNA	KNOWN	AC067959.1	2	6	-0.493020
chr2	21317660	21561313	21439486	ENSG00000231204.5	+	lincRNA	KNOWN	AC011752.1	3	5	-0.432325
chr2	21362292	21364025	21363158	ENSG00000270654.1	-	processed_pseudogene	KNOWN	NUTF2P8	1	2	-0.614649
chr2	21630548	21636309	21633428	ENSG00000235537.1	-	lincRNA	KNOWN	AC009411.2	1	3	-0.481194
chr2	21638431	21649563	21643997	ENSG00000228538.5	-	lincRNA	KNOWN	AC009411.1	2	3	-0.481194
chr2	21687434	21710623	21699028	ENSG00000229621.1	-	lincRNA	KNOWN	AC018742.1	1	3	-0.668142
chr2	21922993	21923288	21923140	ENSG00000264192.1	+	misc_RNA	KNOWN	RN7SL117P	1	1	-0.492971
chr2	21933336	22531105	22232220	ENSG00000231200.1	-	lincRNA	KNOWN	AC068490.2	1	5	-0.615657
chr2	21944609	21965551	21955080	ENSG00000228999.1	-	lincRNA	KNOWN	AC068490.1	1	2	-0.455418
chr2	22188336	22190313	22189324	ENSG00000223691.1	+	processed_pseudogene	KNOWN	AC068044.1	1	1	-0.533482
chr2	22239149	22239243	22239196	ENSG00000277951.1	-	miRNA	NOVEL	AC116176.1	1	1	-0.194312
chr2	22317053	22317244	22317148	ENSG00000234189.1	+	processed_pseudogene	KNOWN	AC099799.1	1	1	-0.789364
chr2	22338886	22339003	22338944	ENSG00000206882.1	-	rRNA	KNOWN	RNA5SP87	1	1	-0.964592
chr2	22377594	22482004	22429799	ENSG00000234207.1	+	lincRNA	KNOWN	AC096570.2	1	4	-0.589785
chr2	22536479	22538288	22537383	ENSG00000233587.1	+	lincRNA	KNOWN	AC096570.1	1	3	-0.346450
chr2	22861552	22861884	22861718	ENSG00000222616.1	+	misc_RNA	KNOWN	RN7SKP27	1	1	-0.331220
chr2	23018125	23199056	23108590	ENSG00000232451.1	-	lincRNA	KNOWN	AC016768.1	3	7	-0.216035
chr2	23330664	23332044	23331354	ENSG00000223530.1	-	lincRNA	KNOWN	AC012506.1	1	4	-0.056288
chr2	23347654	23351864	23349759	ENSG00000233714.1	+	lincRNA	KNOWN	AC012506.2	1	2	0.096685
chr2	23357516	23360376	23358946	ENSG00000223634.1	-	lincRNA	KNOWN	AC012506.3	1	2	0.289029
chr2	23375229	23381299	23378264	ENSG00000235497.5	-	lincRNA	KNOWN	AC012506.4	2	6	-0.311801
chr2	23385217	23708611	23546914	ENSG00000119771.14	+	protein_coding	KNOWN	KLHL29	4	14	0.306899
chr2	23507043	23524344	23515693	ENSG00000224361.1	-	antisense	KNOWN	AC011239.1	1	2	0.190249
chr2	23616499	23617987	23617243	ENSG00000279526.1	-	TEC	KNOWN	AC011239.2	1	1	0.190620
chr2	23667208	23685453	23676330	ENSG00000283031.1	-	lincRNA	KNOWN	RP11-557N21.1	1	7	0.442870
chr2	23748664	23927114	23837889	ENSG00000119778.14	-	protein_coding	KNOWN	ATAD2B	9	28	-0.220451
chr2	23872268	23873014	23872641	ENSG00000224464.2	-	processed_pseudogene	KNOWN	PGAM1P6	1	1	-0.161457
chr2	23900693	23901149	23900921	ENSG00000238111.1	+	processed_pseudogene	KNOWN	AC066692.3	1	1	-0.026653
chr2	23927285	24004909	23966097	ENSG00000173960.12	+	protein_coding	KNOWN	UBXN2A	5	8	0.170077
chr2	23943846	23944351	23944098	ENSG00000234946.1	+	processed_pseudogene	KNOWN	SDHCP3	1	1	0.442489
chr2	23996792	23996870	23996831	ENSG00000280793.1	-	miRNA	NOVEL	AC066692.1	1	1	-0.100653
chr2	23996795	23997085	23996940	ENSG00000243847.3	-	misc_RNA	KNOWN	RN7SL610P	1	1	-0.100653
chr2	24010081	24063321	24036701	ENSG00000205639.9	+	protein_coding	KNOWN	MFSD2B	5	14	0.363148
chr2	24029340	24049575	24039457	ENSG00000163026.11	-	protein_coding	KNOWN	C2orf44	3	4	0.203248
chr2	24045835	24045938	24045886	ENSG00000222940.1	+	snRNA	KNOWN	RNU6-370P	1	1	0.188455
chr2	24049701	24063681	24056691	ENSG00000119782.13	+	protein_coding	KNOWN	FKBP1B	6	6	0.207064
chr2	24067584	24076443	24072013	ENSG00000115128.6	-	protein_coding	KNOWN	SF3B6	2	4	0.213400
chr2	24076526	24169640	24123083	ENSG00000219626.8	+	protein_coding	KNOWN	FAM228B	10	11	0.083686
chr2	24077433	24085861	24081647	ENSG00000115129.13	-	protein_coding	KNOWN	TP53I3	6	6	0.215623
chr2	24115371	24123477	24119424	ENSG00000176732.6	-	protein_coding	KNOWN	PFN4	3	5	-0.054850
chr2	24124366	24190436	24157401	ENSG00000276087.1	+	protein_coding	KNOWN	RP11-507M3.1	1	14	0.042579
chr2	24165884	24175005	24170444	ENSG00000232642.1	-	antisense	KNOWN	AC008073.7	2	4	0.197258
chr2	24175069	24200849	24187959	ENSG00000186453.12	+	protein_coding	KNOWN	FAM228A	4	7	0.247183
chr2	24199839	24201698	24200768	ENSG00000223754.1	-	antisense	KNOWN	AC008073.9	1	2	0.175893
chr2	24202864	24360714	24281789	ENSG00000198399.14	-	protein_coding	KNOWN	ITSN2	13	40	-0.018733
chr2	24214381	24221516	24217948	ENSG00000242628.5	+	antisense	KNOWN	AC009228.1	3	3	0.197235
chr2	24273614	24273741	24273677	ENSG00000251805.1	-	scaRNA	NOVEL	SCARNA21	1	1	-0.255932
chr2	24330402	24330674	24330538	ENSG00000232963.1	+	processed_pseudogene	KNOWN	HMGN2P20	1	1	-0.032704
chr2	24334512	24335152	24334832	ENSG00000233747.1	+	processed_pseudogene	KNOWN	RPL36AP13	1	2	-0.032704
chr2	24491914	24770702	24631308	ENSG00000084676.15	+	protein_coding	KNOWN	NCOA1	11	25	-0.169747
chr2	24564630	24564738	24564684	ENSG00000202430.1	-	rRNA	KNOWN	RNA5SP88	1	1	-0.077933
chr2	24676309	24676415	24676362	ENSG00000206732.1	+	snRNA	KNOWN	RNU6-936P	1	1	-0.172655
chr2	24789734	24793382	24791558	ENSG00000184924.5	-	protein_coding	KNOWN	PTRHD1	6	3	0.112084
chr2	24793136	24822376	24807756	ENSG00000138092.10	+	protein_coding	KNOWN	CENPO	9	8	0.149025
chr2	24819169	24919839	24869504	ENSG00000138031.14	-	protein_coding	KNOWN	ADCY3	13	21	0.355140
chr2	24825610	24826717	24826163	ENSG00000271936.1	+	antisense	KNOWN	RP11-443B20.1	1	1	0.217523
chr2	24943636	24972094	24957865	ENSG00000115137.11	-	protein_coding	KNOWN	DNAJC27	7	9	0.249984
chr2	24968958	24969224	24969091	ENSG00000237953.1	-	processed_pseudogene	KNOWN	AC013267.1	1	1	0.294381
chr2	24969388	24969477	24969432	ENSG00000202479.1	-	snoRNA	NOVEL	SNORD14	1	1	0.294381
chr2	24971390	25039694	25005542	ENSG00000224165.5	+	antisense	KNOWN	DNAJC27-AS1	7	5	0.130648
chr2	25008845	25008946	25008895	ENSG00000207069.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.100212
chr2	25042130	25159137	25100633	ENSG00000084710.13	+	protein_coding	KNOWN	EFR3B	5	23	0.397700
chr2	25058032	25058329	25058180	ENSG00000276653.1	+	misc_RNA	KNOWN	RN7SL856P	1	1	0.396432
chr2	25079901	25081689	25080795	ENSG00000229593.1	-	processed_pseudogene	KNOWN	SUCLA2P3	1	3	0.274856
chr2	25160853	25168903	25164878	ENSG00000115138.10	-	protein_coding	KNOWN	POMC	5	4	0.401774
chr2	25204313	25209202	25206757	ENSG00000230452.1	+	antisense	KNOWN	LINC01381	1	2	-0.069371
chr2	25227855	25342590	25285222	ENSG00000119772.16	-	protein_coding	KNOWN	DNMT3A	15	24	0.495005
chr2	25328633	25328744	25328688	ENSG00000221445.2	-	miRNA	KNOWN	MIR1301	1	1	0.502925
chr2	25369136	25375845	25372490	ENSG00000235072.2	-	lincRNA	KNOWN	AC012074.2	2	2	0.515598
chr2	25377198	25673647	25525422	ENSG00000138101.18	-	protein_coding	KNOWN	DTNB	30	21	0.011149
chr2	25421117	25427643	25424380	ENSG00000224220.1	+	antisense	KNOWN	AC104699.1	1	3	0.161254
chr2	25697076	25697188	25697132	ENSG00000201160.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.037544
chr2	25722192	25722296	25722244	ENSG00000222070.1	+	miRNA	NOVEL	AC010150.2	1	1	0.327880
chr2	25733753	25878516	25806134	ENSG00000143970.16	-	protein_coding	KNOWN	ASXL2	4	13	0.015172
chr2	25809925	25810656	25810290	ENSG00000187536.4	-	processed_pseudogene	KNOWN	TPM3P7	1	1	-0.086358
chr2	25822469	25822950	25822709	ENSG00000217643.1	+	processed_pseudogene	KNOWN	PTGES3P2	1	1	-0.085546
chr2	25856461	25856966	25856713	ENSG00000218682.1	-	processed_pseudogene	KNOWN	AC010150.1	1	1	0.371064
chr2	25886964	25887206	25887085	ENSG00000217718.1	-	processed_pseudogene	KNOWN	AC064847.4	1	1	0.272564
chr2	25926596	25982749	25954672	ENSG00000084731.13	-	protein_coding	KNOWN	KIF3C	8	10	0.382347
chr2	25994794	25995081	25994937	ENSG00000237629.1	+	processed_pseudogene	KNOWN	UQCRHP2	1	1	0.491456
chr2	26028208	26028612	26028410	ENSG00000268412.2	-	processed_pseudogene	KNOWN	TRMT112P6	1	2	0.486070
chr2	26034107	26137454	26085780	ENSG00000084733.10	+	protein_coding	KNOWN	RAB10	4	6	0.240586
chr2	26042675	26042781	26042728	ENSG00000199872.1	+	snRNA	KNOWN	RNU6-942P	1	1	0.329320
chr2	26101317	26102136	26101726	ENSG00000235440.1	-	processed_pseudogene	KNOWN	RP11-214J9.1	1	1	0.175408
chr2	26140263	26141264	26140763	ENSG00000231655.1	-	processed_pseudogene	KNOWN	AC011742.3	1	2	0.014916
chr2	26149204	26150731	26149967	ENSG00000214465.3	+	processed_pseudogene	KNOWN	SMARCE1P6	1	2	0.028680
chr2	26160023	26161136	26160579	ENSG00000227133.1	+	processed_pseudogene	KNOWN	AC011742.5	1	3	0.043629
chr2	26162056	26162554	26162305	ENSG00000237951.1	+	processed_pseudogene	KNOWN	PPIL1P1	1	1	0.043629
chr2	26173091	26189663	26181377	ENSG00000157833.12	+	protein_coding	KNOWN	GAREML	3	6	0.321726
chr2	26190635	26244726	26217680	ENSG00000084754.10	-	protein_coding	KNOWN	HADHA	4	20	0.048993
chr2	26243170	26290468	26266819	ENSG00000138029.13	+	protein_coding	KNOWN	HADHB	9	16	0.286301
chr2	26308173	26346817	26327495	ENSG00000173567.14	-	protein_coding	KNOWN	ADGRF3	9	15	0.275508
chr2	26308547	26395891	26352219	ENSG00000138018.17	+	protein_coding	KNOWN	EPT1	5	11	0.229993
chr2	26401916	26456711	26429313	ENSG00000157856.10	+	protein_coding	KNOWN	DRC1	7	17	0.164412
chr2	26457203	26558698	26507950	ENSG00000115155.16	-	protein_coding	KNOWN	OTOF	7	47	0.457153
chr2	26562582	26579532	26571057	ENSG00000173557.14	+	protein_coding	KNOWN	C2orf70	4	5	0.369747
chr2	26581202	26641368	26611285	ENSG00000157884.10	-	protein_coding	KNOWN	CIB4	3	7	0.441417
chr2	26671254	26674464	26672859	ENSG00000225378.1	-	antisense	KNOWN	AC015977.6	1	3	0.277942
chr2	26678219	26678510	26678364	ENSG00000225024.1	-	processed_pseudogene	KNOWN	AC015977.5	1	1	0.277942
chr2	26692690	26733420	26713055	ENSG00000171303.6	+	protein_coding	KNOWN	KCNK3	2	3	0.581690
chr2	26764284	26781231	26772757	ENSG00000213699.8	+	protein_coding	KNOWN	SLC35F6	4	6	0.669177
chr2	26764289	26801067	26782678	ENSG00000115163.14	+	protein_coding	KNOWN	CENPA	6	6	0.667158
chr2	26827169	26827520	26827344	ENSG00000145835.6	-	processed_pseudogene	KNOWN	CDKN2AIPNLP2	1	1	0.827164
chr2	26847747	26950351	26899049	ENSG00000157851.16	+	protein_coding	KNOWN	DPYSL5	7	13	0.373628
chr2	26950308	27009807	26980057	ENSG00000230286.1	-	antisense	KNOWN	AC013472.4	1	2	0.608839
chr2	26970612	27027196	26998904	ENSG00000084764.10	+	protein_coding	KNOWN	MAPRE3	9	7	0.724501
chr2	26984776	27014612	26999694	ENSG00000205500.8	-	processed_transcript	KNOWN	AC013472.3	4	6	0.673365
chr2	27032910	27041695	27037302	ENSG00000119777.18	+	protein_coding	KNOWN	TMEM214	13	18	0.970686
chr2	27042364	27070622	27056493	ENSG00000084693.15	+	protein_coding	KNOWN	AGBL5	10	16	1.062321
chr2	27049683	27050264	27049973	ENSG00000231636.1	-	antisense	KNOWN	AGBL5-AS1	1	2	1.027892
chr2	27053618	27054276	27053947	ENSG00000272056.1	-	antisense	KNOWN	RP11-503P10.1	1	1	1.096108
chr2	27061038	27061815	27061426	ENSG00000229122.1	+	sense_intronic	KNOWN	AGBL5-IT1	1	2	1.096108
chr2	27062428	27062907	27062667	ENSG00000272148.1	-	antisense	KNOWN	RP11-195B17.1	1	1	1.096108
chr2	27070472	27071773	27071122	ENSG00000228474.5	-	protein_coding	KNOWN	OST4	3	3	1.100657
chr2	27078567	27086408	27082487	ENSG00000138080.13	+	protein_coding	KNOWN	EMILIN1	2	8	1.100657
chr2	27086747	27100772	27093759	ENSG00000138030.12	+	protein_coding	KNOWN	KHK	6	10	1.193499
chr2	27098889	27119115	27109002	ENSG00000138028.14	-	protein_coding	KNOWN	CGREF1	8	7	1.056233
chr2	27123789	27130812	27127300	ENSG00000143994.13	+	protein_coding	KNOWN	ABHD1	8	9	0.863773
chr2	27130756	27134675	27132715	ENSG00000138073.13	-	protein_coding	KNOWN	PREB	9	9	0.932415
chr2	27136848	27139410	27138129	ENSG00000186143.10	-	protein_coding	KNOWN	PRR30	2	4	0.932415
chr2	27149004	27156974	27152989	ENSG00000163792.6	+	protein_coding	KNOWN	TCF23	2	3	0.803898
chr2	27158563	27159229	27158896	ENSG00000236099.1	-	unprocessed_pseudogene	KNOWN	AC013403.13	1	2	0.785565
chr2	27199587	27212958	27206272	ENSG00000138074.14	-	protein_coding	KNOWN	SLC5A6	18	18	0.779281
chr2	27212027	27217178	27214602	ENSG00000138085.16	+	protein_coding	KNOWN	ATRAID	8	7	1.040766
chr2	27217390	27243943	27230666	ENSG00000084774.13	+	protein_coding	KNOWN	CAD	11	44	0.993493
chr2	27253684	27275817	27264750	ENSG00000115194.10	-	protein_coding	KNOWN	SLC30A3	10	8	1.109328
chr2	27275421	27281499	27278460	ENSG00000163793.12	+	protein_coding	KNOWN	DNAJC5G	6	7	0.985761
chr2	27282392	27307439	27294915	ENSG00000138100.13	+	protein_coding	KNOWN	TRIM54	4	10	0.847979
chr2	27307400	27308445	27307922	ENSG00000163794.6	-	protein_coding	KNOWN	UCN	1	2	0.787881
chr2	27309492	27325680	27317586	ENSG00000115204.14	-	protein_coding	KNOWN	MPV17	23	9	1.086620
chr2	27325849	27357034	27341441	ENSG00000115207.13	-	protein_coding	KNOWN	GTF3C2	14	19	0.933481
chr2	27335535	27342599	27339067	ENSG00000234945.7	+	antisense	KNOWN	GTF3C2-AS1	13	4	0.940899
chr2	27356246	27367622	27361934	ENSG00000234072.1	+	antisense	KNOWN	AC074117.10	3	3	0.816357
chr2	27364352	27370486	27367419	ENSG00000115211.15	-	protein_coding	KNOWN	EIF2B4	12	14	0.827228
chr2	27370496	27377533	27374014	ENSG00000115234.10	+	protein_coding	KNOWN	SNX17	10	16	0.953286
chr2	27377231	27380790	27379010	ENSG00000163795.13	-	protein_coding	KNOWN	ZNF513	4	4	0.953286
chr2	27381194	27409687	27395440	ENSG00000115241.10	-	protein_coding	KNOWN	PPM1G	3	10	0.907603
chr2	27392784	27393367	27393075	ENSG00000213453.3	-	processed_pseudogene	KNOWN	FTH1P3	1	1	0.887172
chr2	27427790	27442259	27435024	ENSG00000115216.13	+	protein_coding	KNOWN	NRBP1	9	19	0.626070
chr2	27442366	27446481	27444423	ENSG00000157992.12	+	protein_coding	KNOWN	KRTCAP3	7	7	0.575201
chr2	27444371	27489789	27467080	ENSG00000138002.14	-	protein_coding	KNOWN	IFT172	18	48	0.649991
chr2	27455156	27455862	27455509	ENSG00000235267.1	+	processed_pseudogene	KNOWN	AC074117.13	1	2	0.757737
chr2	27475494	27475595	27475544	ENSG00000200003.1	-	snRNA	KNOWN	RNU6-986P	1	1	0.562372
chr2	27491883	27495245	27493564	ENSG00000115226.9	-	protein_coding	KNOWN	FNDC4	3	7	0.732449
chr2	27496842	27523684	27510263	ENSG00000084734.8	+	protein_coding	KNOWN	GCKR	6	19	0.596684
chr2	27537386	27567144	27552265	ENSG00000233438.1	+	protein_coding	KNOWN	AC109829.1	1	5	0.262826
chr2	27556908	27557282	27557095	ENSG00000280034.1	+	protein_coding	KNOWN	AC109829.2	1	1	0.357886
chr2	27576522	27582720	27579621	ENSG00000221843.3	+	protein_coding	KNOWN	C2orf16	1	1	0.237709
chr2	27581889	27581946	27581917	ENSG00000221531.1	-	miRNA	NOVEL	AC074091.1	1	1	0.237709
chr2	27582969	27623215	27603092	ENSG00000243943.9	+	protein_coding	KNOWN	ZNF512	8	15	0.504441
chr2	27583046	27635174	27609110	ENSG00000259080.1	+	processed_transcript	KNOWN	RP11-158I13.2	1	18	0.500684
chr2	27625639	27629012	27627325	ENSG00000176714.9	-	protein_coding	KNOWN	CCDC121	3	2	0.347721
chr2	27628247	27651508	27639877	ENSG00000198522.13	+	protein_coding	KNOWN	GPN1	12	15	0.620136
chr2	27642043	27642169	27642106	ENSG00000206731.1	-	snoRNA	NOVEL	SNORA36	1	1	0.668076
chr2	27650812	27663840	27657326	ENSG00000119760.15	-	protein_coding	KNOWN	SUPT7L	5	6	0.301026
chr2	27663471	27694976	27679223	ENSG00000163798.13	+	protein_coding	KNOWN	SLC4A1AP	6	14	0.360137
chr2	27705786	27715732	27710759	ENSG00000205334.2	-	lincRNA	KNOWN	LINC01460	1	2	0.248378
chr2	27771717	27988087	27879902	ENSG00000243147.7	+	protein_coding	KNOWN	MRPL33	6	6	0.165621
chr2	27781364	27891098	27836231	ENSG00000171174.13	-	protein_coding	KNOWN	RBKS	5	9	0.184176
chr2	27889941	28338901	28114421	ENSG00000158019.20	+	protein_coding	KNOWN	BRE	11	14	0.085318
chr2	27896116	27897195	27896655	ENSG00000270846.1	-	processed_pseudogene	KNOWN	RP11-674I16.1	1	1	0.179988
chr2	27996367	27996449	27996408	ENSG00000265321.1	+	miRNA	KNOWN	MIR4263	1	1	-0.268184
chr2	28015777	28016482	28016129	ENSG00000270528.1	-	processed_pseudogene	KNOWN	RP11-674I16.2	1	1	-0.234236
chr2	28134408	28134585	28134496	ENSG00000277035.1	-	misc_RNA	NOVEL	uc_338	1	1	0.091992
chr2	28307691	28310459	28309075	ENSG00000223522.1	-	antisense	KNOWN	AC093690.1	1	3	0.216214
chr2	28308161	28308570	28308365	ENSG00000225991.1	+	processed_pseudogene	KNOWN	RPL23AP34	1	1	0.234950
chr2	28384409	28394672	28389540	ENSG00000229951.5	-	antisense	KNOWN	FLJ31356	2	3	0.516646
chr2	28392448	28417312	28404880	ENSG00000075426.11	+	protein_coding	KNOWN	FOSL2	4	4	0.634290
chr2	28396815	28397110	28396962	ENSG00000270640.1	+	sense_intronic	KNOWN	RP11-373D23.2	1	1	0.434593
chr2	28425945	28426719	28426332	ENSG00000270210.1	+	lincRNA	KNOWN	RP11-373D23.3	1	1	1.113557
chr2	28448167	28450184	28449175	ENSG00000227938.1	-	lincRNA	KNOWN	AC104695.4	1	2	0.442916
chr2	28457145	28643788	28550466	ENSG00000163803.12	+	protein_coding	KNOWN	PLB1	12	58	0.321844
chr2	28460256	28460361	28460308	ENSG00000242915.1	-	processed_pseudogene	KNOWN	SNRPGP7	1	1	0.409649
chr2	28633282	28664540	28648911	ENSG00000230730.1	-	antisense	KNOWN	AC074011.2	1	2	0.330461
chr2	28683976	28684083	28684029	ENSG00000222232.1	+	rRNA	KNOWN	RNA5SP89	1	1	0.238381
chr2	28708953	28736205	28722579	ENSG00000226833.5	-	antisense	KNOWN	AC097724.3	3	4	0.306101
chr2	28751640	28802940	28777290	ENSG00000213639.9	+	protein_coding	KNOWN	PPP1CB	9	9	0.137401
chr2	28782517	28850611	28816564	ENSG00000163806.15	+	protein_coding	KNOWN	SPDYA	7	11	0.062576
chr2	28810281	28810706	28810493	ENSG00000273233.1	-	lincRNA	KNOWN	RP11-713D19.1	1	1	0.369773
chr2	28849821	28870301	28860061	ENSG00000171103.10	-	protein_coding	KNOWN	TRMT61B	5	7	-0.023587
chr2	28894643	28948222	28921432	ENSG00000163811.11	+	protein_coding	KNOWN	WDR43	6	18	0.111036
chr2	28913664	28913748	28913706	ENSG00000264994.1	+	snoRNA	KNOWN	SNORD92	1	1	0.239422
chr2	28927067	28927144	28927105	ENSG00000265145.1	+	snoRNA	KNOWN	SNORD53	1	1	0.239422
chr2	28927243	28927340	28927291	ENSG00000222224.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.239422
chr2	28927983	28928060	28928021	ENSG00000265706.1	+	snoRNA	NOVEL	SNORD53_SNORD92	1	1	0.239422
chr2	28956611	29061373	29008992	ENSG00000189350.12	+	protein_coding	KNOWN	FAM179A	7	20	0.383434
chr2	28972414	28972521	28972467	ENSG00000200283.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.308200
chr2	29060976	29074261	29067618	ENSG00000179270.6	-	protein_coding	KNOWN	C2orf71	2	3	0.275923
chr2	29081270	29081351	29081310	ENSG00000263957.1	-	miRNA	NOVEL	AC105398.1	1	1	0.287339
chr2	29096843	29097525	29097184	ENSG00000229224.1	-	antisense	KNOWN	AC105398.3	1	2	0.349150
chr2	29097705	29189643	29143674	ENSG00000115295.19	+	protein_coding	KNOWN	CLIP4	12	16	0.045022
chr2	29192774	29921566	29557170	ENSG00000171094.15	-	protein_coding	KNOWN	ALK	5	29	-0.200862
chr2	29681024	29681102	29681063	ENSG00000280947.1	-	miRNA	NOVEL	AC093756.1	1	1	-0.415948
chr2	29681027	29681323	29681175	ENSG00000242699.3	-	misc_RNA	KNOWN	RN7SL516P	1	1	-0.415948
chr2	29890371	29892354	29891362	ENSG00000230737.1	+	antisense	KNOWN	AC106870.1	1	2	-0.385055
chr2	29899597	29907199	29903398	ENSG00000197644.2	+	antisense	KNOWN	AC106870.2	1	2	-0.385055
chr2	30051066	30143804	30097435	ENSG00000233862.5	-	antisense	KNOWN	AC016907.3	3	3	-0.078526
chr2	30066124	30066213	30066168	ENSG00000221383.1	-	miRNA	NOVEL	AC016907.1	1	1	-0.533613
chr2	30077093	30078272	30077682	ENSG00000225943.1	+	processed_pseudogene	KNOWN	AC016907.2	1	2	0.167280
chr2	30146941	30160533	30153737	ENSG00000119801.12	+	protein_coding	KNOWN	YPEL5	10	5	0.075824
chr2	30187434	30187566	30187500	ENSG00000207187.1	+	snoRNA	NOVEL	SNORA64	1	1	0.320066
chr2	30209995	30210307	30210151	ENSG00000231712.1	+	processed_pseudogene	KNOWN	AC104698.2	1	2	-0.111859
chr2	30231531	30323730	30277630	ENSG00000213626.11	+	protein_coding	KNOWN	LBH	9	4	0.332665
chr2	30346659	30352431	30349545	ENSG00000235997.2	+	lincRNA	KNOWN	AC109642.1	1	2	0.293481
chr2	30408170	30408346	30408258	ENSG00000280154.1	+	TEC	KNOWN	RP11-182E7.1	1	1	0.136159
chr2	30432353	30432448	30432400	ENSG00000221377.1	-	miRNA	NOVEL	AC073255.1	1	1	-0.030214
chr2	30447226	30644225	30545725	ENSG00000172954.13	+	protein_coding	KNOWN	LCLAT1	12	8	-0.130614
chr2	30494502	30494619	30494560	ENSG00000280462.1	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.148271
chr2	30677762	30679895	30678828	ENSG00000278908.1	+	TEC	KNOWN	RP11-523J2.1	1	1	0.031329
chr2	30722771	30820542	30771656	ENSG00000162949.16	-	protein_coding	KNOWN	CAPN13	7	23	-0.071075
chr2	30746444	30746701	30746572	ENSG00000230118.1	-	processed_pseudogene	KNOWN	AC092569.2	1	1	0.140355
chr2	30910467	31155202	31032834	ENSG00000158089.14	-	protein_coding	KNOWN	GALNT14	15	17	-0.092711
chr2	30986939	30991426	30989182	ENSG00000234579.1	+	antisense	KNOWN	AC009305.1	1	2	0.061844
chr2	31092826	31092916	31092871	ENSG00000266310.2	+	miRNA	NOVEL	AC009305.2	1	1	-0.282404
chr2	31173056	31233858	31203457	ENSG00000214711.9	-	protein_coding	KNOWN	CAPN14	2	22	-0.093387
chr2	31228312	31228410	31228361	ENSG00000201671.1	+	rRNA	KNOWN	RNA5SP90	1	1	0.110851
chr2	31234337	31269447	31251892	ENSG00000013016.14	+	protein_coding	KNOWN	EHD3	2	7	0.255091
chr2	31290762	31291604	31291183	ENSG00000213620.3	+	processed_pseudogene	KNOWN	AL121657.4	1	2	0.300745
chr2	31334321	31414715	31374518	ENSG00000158125.9	-	protein_coding	KNOWN	XDH	3	36	-0.043133
chr2	31522480	31581067	31551773	ENSG00000277893.1	-	protein_coding	KNOWN	SRD5A2	1	5	-0.422362
chr2	31526942	31563464	31545203	ENSG00000228563.1	+	antisense	KNOWN	AL133247.2	1	3	-0.376124
chr2	31651381	31651862	31651621	ENSG00000270422.1	+	processed_pseudogene	KNOWN	AL133247.3	1	1	-0.397393
chr2	31793823	31803980	31798901	ENSG00000223647.1	-	lincRNA	KNOWN	AL133249.1	1	5	-0.512707
chr2	31810195	31810288	31810241	ENSG00000238448.1	-	miRNA	NOVEL	AL121652.2	1	1	0.055233
chr2	31822591	31823436	31823013	ENSG00000237007.4	-	processed_pseudogene	KNOWN	KRT18P52	1	1	0.055233
chr2	31823018	31823106	31823062	ENSG00000265267.1	-	miRNA	NOVEL	AL121652.3	1	1	0.055233
chr2	31823413	31823817	31823615	ENSG00000242272.1	-	processed_pseudogene	KNOWN	AK2P2	1	1	0.055233
chr2	31852976	31853423	31853199	ENSG00000273165.1	-	lincRNA	KNOWN	RP11-1057B6.1	1	1	-0.278991
chr2	31865060	32011230	31938145	ENSG00000162959.13	-	protein_coding	KNOWN	MEMO1	9	10	-0.284030
chr2	31867809	32039812	31953810	ENSG00000162961.13	-	protein_coding	KNOWN	DPY30	7	10	-0.271972
chr2	31919862	31919949	31919905	ENSG00000221326.1	-	miRNA	NOVEL	AL121652.1	1	1	0.027861
chr2	32013061	32013368	32013214	ENSG00000271228.1	+	antisense	KNOWN	CTC-336P14.1	1	1	-0.378638
chr2	32063611	32157637	32110624	ENSG00000021574.11	+	protein_coding	KNOWN	SPAST	4	17	0.020005
chr2	32088304	32088391	32088347	ENSG00000263802.1	-	miRNA	NOVEL	AL121655.1	1	1	0.109586
chr2	32165046	32165757	32165401	ENSG00000272716.1	-	lincRNA	KNOWN	RP11-563N4.1	1	1	-0.130401
chr2	32165841	32224379	32195110	ENSG00000152683.14	+	protein_coding	KNOWN	SLC30A6	9	15	-0.054404
chr2	32201600	32203999	32202799	ENSG00000229816.1	+	processed_pseudogene	KNOWN	DDX50P1	1	1	-0.225623
chr2	32214456	32214562	32214509	ENSG00000201113.1	-	snRNA	KNOWN	RNU6-647P	1	1	0.083530
chr2	32224453	32265854	32245153	ENSG00000091106.18	-	protein_coding	KNOWN	NLRC4	4	10	0.011609
chr2	32277910	32316594	32297252	ENSG00000119820.10	+	protein_coding	KNOWN	YIPF4	4	6	0.092950
chr2	32321638	32323002	32322320	ENSG00000272754.1	+	lincRNA	KNOWN	AL133245.2	1	1	0.044686
chr2	32357028	32618899	32487963	ENSG00000115760.13	+	protein_coding	KNOWN	BIRC6	12	74	0.024833
chr2	32377631	32379599	32378615	ENSG00000230046.1	-	antisense	KNOWN	BIRC6-AS1	1	2	-0.072819
chr2	32521927	32523547	32522737	ENSG00000276334.1	+	sense_intronic	KNOWN	AL133243.1	1	1	0.182447
chr2	32526504	32529507	32528005	ENSG00000276517.1	+	sense_intronic	KNOWN	AL133243.2	1	1	0.182447
chr2	32532153	32532246	32532199	ENSG00000207653.1	+	miRNA	KNOWN	MIR558	1	1	-0.105045
chr2	32548675	32549040	32548857	ENSG00000274159.1	+	sense_intronic	KNOWN	AL133243.3	1	1	-0.105045
chr2	32557520	32574818	32566169	ENSG00000279897.1	-	antisense	KNOWN	BIRC6-AS2	1	2	0.048215
chr2	32563328	32566436	32564882	ENSG00000279544.1	+	TEC	KNOWN	AL133243.4	1	1	0.082773
chr2	32628032	32821051	32724541	ENSG00000018699.11	+	protein_coding	KNOWN	TTC27	6	20	0.061120
chr2	32635255	32635331	32635293	ENSG00000265057.1	+	miRNA	KNOWN	MIR4765	1	1	0.403453
chr2	32825443	32926693	32876068	ENSG00000230876.6	+	lincRNA	KNOWN	LINC00486	3	6	0.155678
chr2	32927127	32928405	32927766	ENSG00000236854.1	+	lincRNA	KNOWN	AL121656.5	1	3	0.346852
chr2	32939061	32939145	32939103	ENSG00000275309.1	-	miRNA	NOVEL	AL133244.2	1	1	0.077195
chr2	32945339	32945451	32945395	ENSG00000206951.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.077195
chr2	32946972	33399509	33173240	ENSG00000049323.15	+	protein_coding	KNOWN	LTBP1	12	34	-0.039904
chr2	33056333	33063113	33059723	ENSG00000223951.1	-	processed_pseudogene	KNOWN	AL133244.1	1	3	-0.062585
chr2	33285769	33285887	33285828	ENSG00000212204.1	-	rRNA	KNOWN	RNA5SP91	1	1	-0.041034
chr2	33332898	33333007	33332952	ENSG00000252246.1	+	rRNA	KNOWN	RNA5SP92	1	1	0.012557
chr2	33436324	33564750	33500537	ENSG00000152689.17	+	protein_coding	KNOWN	RASGRP3	18	19	-0.112572
chr2	33555047	33563547	33559297	ENSG00000237133.1	-	antisense	KNOWN	AC020594.5	1	2	-0.204140
chr2	33583658	33599382	33591520	ENSG00000119812.18	-	protein_coding	KNOWN	FAM98A	8	8	-0.211034
chr2	33602041	33602286	33602163	ENSG00000238038.1	+	processed_pseudogene	KNOWN	ATP6V0E1P3	1	1	-0.271756
chr2	33636502	33637425	33636963	ENSG00000187999.4	+	processed_pseudogene	KNOWN	HNRNPA1P61	1	1	0.005835
chr2	33706886	34297753	34002319	ENSG00000203386.6	+	lincRNA	KNOWN	LINC01317	2	7	-0.494675
chr2	33722721	33728207	33725464	ENSG00000239649.3	-	transcribed_processed_pseudogene	KNOWN	MYADML	3	3	-0.337176
chr2	33786038	33786138	33786088	ENSG00000264267.1	-	miRNA	NOVEL	AC069303.1	1	1	-0.121002
chr2	33839782	33840678	33840230	ENSG00000235064.1	-	processed_pseudogene	KNOWN	SLC25A5P2	1	1	-0.367440
chr2	33927384	33927472	33927428	ENSG00000266861.1	+	miRNA	NOVEL	AC097506.1	1	1	-0.474778
chr2	34017971	34018067	34018019	ENSG00000276246.1	-	miRNA	NOVEL	AC009499.1	1	1	-0.496637
chr2	34067226	34069550	34068388	ENSG00000237790.1	+	lincRNA	KNOWN	LINC01318	1	3	-0.437628
chr2	34383788	34635340	34509564	ENSG00000226785.1	+	lincRNA	KNOWN	AC073218.1	1	3	-0.597716
chr2	34403664	34403757	34403710	ENSG00000212025.3	+	miRNA	NOVEL	AC011748.1	1	1	-0.749310
chr2	34677555	34738231	34707893	ENSG00000228262.8	+	lincRNA	KNOWN	LINC01320	16	7	-0.636915
chr2	34692290	34703606	34697948	ENSG00000272027.2	-	lincRNA	KNOWN	RP11-529E15.1	2	3	-0.703188
chr2	34734975	34737118	34736046	ENSG00000232153.2	-	lincRNA	KNOWN	AC073218.3	1	2	-0.932121
chr2	34799850	35185689	34992769	ENSG00000226994.7	+	lincRNA	KNOWN	AC012593.1	16	6	-0.721638
chr2	34809233	34809556	34809394	ENSG00000264352.2	-	misc_RNA	KNOWN	RN7SL602P	1	1	-0.808998
chr2	34998273	35000160	34999216	ENSG00000237320.2	-	lincRNA	KNOWN	AC019064.1	1	3	-0.717578
chr2	35219377	35219604	35219490	ENSG00000196085.5	-	processed_pseudogene	KNOWN	AC013442.1	1	1	-0.567933
chr2	35471405	35471486	35471445	ENSG00000265301.1	+	miRNA	KNOWN	MIR548AD	1	1	-0.946689
chr2	35471605	35471708	35471656	ENSG00000207255.1	+	snRNA	KNOWN	RNU6-1117P	1	1	-0.946689
chr2	35471716	35471841	35471778	ENSG00000229013.1	+	processed_pseudogene	KNOWN	AC083939.1	1	1	-0.946689
chr2	35724759	35725142	35724950	ENSG00000234587.1	-	processed_pseudogene	KNOWN	MRPL50P1	1	1	-0.509090
chr2	36299388	36299830	36299609	ENSG00000233752.1	-	processed_pseudogene	KNOWN	AC009414.1	1	1	-0.331220
chr2	36354749	36355114	36354931	ENSG00000260025.1	-	lincRNA	KNOWN	RP11-490M8.1	1	1	0.063795
chr2	36355926	36551135	36453530	ENSG00000150938.9	+	protein_coding	KNOWN	CRIM1	8	17	0.012050
chr2	36513255	36513732	36513493	ENSG00000273090.1	-	antisense	KNOWN	RP11-78I14.1	1	1	0.182447
chr2	36531805	36646087	36588946	ENSG00000171055.14	-	protein_coding	KNOWN	FEZ2	16	9	0.014175
chr2	36656322	36656941	36656631	ENSG00000270677.1	-	processed_pseudogene	KNOWN	RP11-294L11.1	1	1	-0.238398
chr2	36696690	36814792	36755741	ENSG00000205221.12	+	protein_coding	KNOWN	VIT	8	16	-0.101577
chr2	36839922	36842539	36841230	ENSG00000279519.1	-	TEC	KNOWN	RP11-288C18.1	1	1	-0.206232
chr2	36843640	36966472	36905056	ENSG00000115808.11	-	protein_coding	KNOWN	STRN	3	18	-0.135622
chr2	36867398	36867495	36867446	ENSG00000252756.1	-	snRNA	KNOWN	RNU6-577P	1	1	-0.173062
chr2	36959362	36959462	36959412	ENSG00000281381.1	+	snRNA	NOVEL	U6	1	1	0.110975
chr2	36968383	37084342	37026362	ENSG00000008869.11	-	protein_coding	KNOWN	HEATR5B	5	36	-0.024335
chr2	37084451	37099244	37091847	ENSG00000152133.14	+	protein_coding	KNOWN	GPATCH11	3	9	-0.358634
chr2	37099210	37157065	37128137	ENSG00000055332.16	-	protein_coding	KNOWN	EIF2AK2	7	17	0.072450
chr2	37148530	37149304	37148917	ENSG00000224891.1	+	processed_pseudogene	KNOWN	AC007899.3	1	1	0.319225
chr2	37167820	37196598	37182209	ENSG00000138068.10	-	protein_coding	KNOWN	SULT6B1	5	8	-0.029291
chr2	37194382	37194737	37194559	ENSG00000233159.1	-	processed_pseudogene	KNOWN	AC007390.4	1	1	0.036035
chr2	37196488	37216193	37206340	ENSG00000218739.9	+	protein_coding	KNOWN	CEBPZOS	7	7	0.027704
chr2	37201612	37231713	37216662	ENSG00000115816.13	-	protein_coding	KNOWN	CEBPZ	4	17	0.027120
chr2	37208875	37212677	37210776	ENSG00000272054.1	+	sense_intronic	KNOWN	RP11-423P10.2	1	1	0.017366
chr2	37231631	37253403	37242517	ENSG00000003509.15	+	protein_coding	KNOWN	NDUFAF7	13	10	0.154410
chr2	37250502	37324808	37287655	ENSG00000115825.9	-	protein_coding	KNOWN	PRKD3	10	19	-0.154263
chr2	37325340	37326797	37326068	ENSG00000232028.1	+	lincRNA	KNOWN	AC007391.2	1	2	-0.348581
chr2	37331770	37331876	37331823	ENSG00000207364.1	-	snRNA	KNOWN	RNU6-939P	1	1	-0.149016
chr2	37344574	37373322	37358948	ENSG00000115828.15	+	protein_coding	KNOWN	QPCT	6	7	0.231365
chr2	37435510	37435608	37435559	ENSG00000253078.1	-	snRNA	KNOWN	RNU6-1116P	1	1	-0.120312
chr2	37600136	37646698	37623417	ENSG00000236213.1	+	antisense	KNOWN	AC006369.2	1	5	0.157085
chr2	37641882	37738468	37690175	ENSG00000163171.7	-	protein_coding	KNOWN	CDC42EP3	6	4	0.288058
chr2	37744333	37747046	37745689	ENSG00000236572.1	+	lincRNA	KNOWN	AC006369.3	1	2	0.024878
chr2	37816915	37817961	37817438	ENSG00000225402.1	+	processed_pseudogene	KNOWN	AC010878.3	1	1	0.172365
chr2	37826247	37876274	37851260	ENSG00000237803.5	-	lincRNA	KNOWN	LINC00211	3	4	0.201178
chr2	37923187	38067142	37995164	ENSG00000115841.19	+	protein_coding	KNOWN	RMDN2	12	12	-0.180190
chr2	37949911	38067041	38008476	ENSG00000235848.4	-	antisense	KNOWN	RMDN2-AS1	14	7	-0.209087
chr2	38066973	38109902	38088437	ENSG00000138061.11	-	protein_coding	KNOWN	CYP1B1	7	3	-0.228023
chr2	38073447	38231651	38152549	ENSG00000232973.11	+	antisense	KNOWN	CYP1B1-AS1	35	6	-0.099444
chr2	38121935	38123881	38122908	ENSG00000280276.1	-	TEC	KNOWN	RP11-314C9.1	1	1	0.246714
chr2	38132637	38138946	38135791	ENSG00000229160.1	-	lincRNA	KNOWN	AC009229.6	1	3	-0.096618
chr2	38147415	38147521	38147468	ENSG00000199603.1	+	snRNA	KNOWN	RNU6-951P	1	1	-0.096618
chr2	38193348	38193629	38193488	ENSG00000273006.1	+	lincRNA	KNOWN	RP11-314C9.2	1	1	-0.077933
chr2	38203363	38239590	38221476	ENSG00000227292.1	-	lincRNA	KNOWN	AC009229.5	1	2	-0.257935
chr2	38231568	38232317	38231942	ENSG00000227770.1	+	processed_pseudogene	KNOWN	RPL7P12	1	1	-0.297955
chr2	38285410	38286410	38285910	ENSG00000213594.4	+	processed_pseudogene	KNOWN	GAPDHP25	1	1	-0.012165
chr2	38294880	38377285	38336082	ENSG00000119787.13	-	protein_coding	KNOWN	ATL2	17	13	-0.150853
chr2	38406719	38515740	38461229	ENSG00000231367.5	-	lincRNA	KNOWN	AC016995.3	5	5	0.080504
chr2	38431294	38433573	38432433	ENSG00000235009.1	+	lincRNA	KNOWN	AC093822.1	1	2	0.082531
chr2	38481851	38482804	38482327	ENSG00000213553.4	+	processed_pseudogene	KNOWN	RPLP0P6	1	1	0.037836
chr2	38535258	38536249	38535753	ENSG00000271443.1	-	transcribed_processed_pseudogene	KNOWN	RP11-541E12.1	2	2	0.123186
chr2	38561978	38603586	38582782	ENSG00000143889.15	-	protein_coding	KNOWN	HNRNPLL	12	14	-0.359273
chr2	38601598	38602178	38601888	ENSG00000235586.1	+	antisense	KNOWN	AC011247.3	1	2	-0.025660
chr2	38665910	38741237	38703573	ENSG00000143891.16	+	protein_coding	KNOWN	GALM	5	7	0.232175
chr2	38668202	38671421	38669811	ENSG00000232518.3	-	antisense	KNOWN	AC074366.3	5	4	0.137215
chr2	38743599	38751494	38747546	ENSG00000115875.18	-	protein_coding	KNOWN	SRSF7	12	9	0.653601
chr2	38751534	38785000	38768267	ENSG00000152147.10	+	protein_coding	KNOWN	GEMIN6	3	6	0.119586
chr2	38763534	38765221	38764377	ENSG00000227238.1	+	unitary_pseudogene	KNOWN	TTC39DP	1	1	0.178292
chr2	38769265	38770124	38769694	ENSG00000232114.1	+	processed_pseudogene	KNOWN	AC018693.5	1	2	0.159234
chr2	38797729	38875934	38836831	ENSG00000163214.20	-	protein_coding	KNOWN	DHX57	11	24	-0.033584
chr2	38810432	38811654	38811043	ENSG00000223922.1	-	processed_pseudogene	KNOWN	ASS1P2	1	1	0.083168
chr2	38861720	38863133	38862426	ENSG00000225284.1	+	antisense	KNOWN	AC018693.6	1	2	-0.406814
chr2	38875962	38929072	38902517	ENSG00000188010.12	+	protein_coding	KNOWN	MORN2	6	9	-0.124913
chr2	38884560	38884666	38884613	ENSG00000207295.1	-	snRNA	KNOWN	RNU6-851P	1	1	-0.244604
chr2	38889880	38975449	38932664	ENSG00000214694.10	+	protein_coding	KNOWN	ARHGEF33	8	18	-0.128748
chr2	38936876	38937158	38937017	ENSG00000265905.2	-	misc_RNA	KNOWN	RN7SL96P	1	1	-0.363688
chr2	38959287	38960342	38959814	ENSG00000269210.2	-	antisense	KNOWN	RP11-173C1.1	1	1	-0.016649
chr2	38977203	38977287	38977245	ENSG00000281070.1	-	miRNA	NOVEL	AC019171.1	1	1	-0.043096
chr2	38981396	39124345	39052870	ENSG00000115904.12	-	protein_coding	KNOWN	SOS1	8	24	-0.270049
chr2	38992279	38993857	38993068	ENSG00000229692.3	-	sense_intronic	KNOWN	SOS1-IT1	3	2	-0.219367
chr2	39082589	39082692	39082640	ENSG00000206985.1	+	snRNA	KNOWN	RNU6-198P	1	1	-0.216958
chr2	39098149	39098445	39098297	ENSG00000225900.1	-	processed_pseudogene	KNOWN	HSPE1P13	1	1	-0.672195
chr2	39128826	39128927	39128876	ENSG00000202309.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.140086
chr2	39175646	39229588	39202617	ENSG00000205111.8	-	protein_coding	KNOWN	CDKL4	4	9	-0.035055
chr2	39249266	39437312	39343289	ENSG00000011566.14	-	protein_coding	KNOWN	MAP4K3	13	34	-0.173722
chr2	39283657	39283791	39283724	ENSG00000252473.1	-	snoRNA	NOVEL	SNORA67	1	1	-0.142473
chr2	39323328	39323804	39323566	ENSG00000273035.1	-	sense_intronic	KNOWN	RP11-449G16.1	1	1	0.101642
chr2	39393522	39393618	39393570	ENSG00000223179.2	-	snRNA	KNOWN	RNU6-373P	1	1	-0.558934
chr2	39436637	39665343	39550990	ENSG00000231312.6	+	antisense	KNOWN	AC007246.3	11	9	0.049066
chr2	39664982	39717963	39691472	ENSG00000152154.10	+	protein_coding	KNOWN	TMEM178A	6	5	-0.110683
chr2	39736060	39779267	39757663	ENSG00000138050.14	-	protein_coding	KNOWN	THUMPD2	9	11	-0.115625
chr2	39786453	40255209	40020831	ENSG00000227028.6	+	antisense	KNOWN	SLC8A1-AS1	41	8	-0.203795
chr2	39929110	39929998	39929554	ENSG00000235653.1	+	processed_pseudogene	KNOWN	AC007253.1	1	1	-0.131783
chr2	40097270	40611053	40354161	ENSG00000183023.18	-	protein_coding	KNOWN	SLC8A1	12	11	-0.271444
chr2	40746487	40767452	40756969	ENSG00000233128.1	+	lincRNA	KNOWN	AC007317.1	1	4	-0.696076
chr2	41143780	41157555	41150667	ENSG00000237442.3	+	transcribed_processed_pseudogene	KNOWN	HNRNPA1P57	2	3	-0.731549
chr2	41596386	41596492	41596439	ENSG00000221372.1	+	miRNA	NOVEL	AC010739.1	1	1	-0.800026
chr2	41819747	41820754	41820250	ENSG00000236090.2	+	processed_pseudogene	KNOWN	LDHAP3	1	1	-0.773707
chr2	41850203	41850601	41850402	ENSG00000236533.1	-	processed_pseudogene	KNOWN	AC009413.2	1	1	-0.269408
chr2	41857271	41857372	41857321	ENSG00000207218.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.269408
chr2	41871271	41871388	41871329	ENSG00000223245.1	+	snRNA	KNOWN	RNU4-63P	1	1	-0.076885
chr2	41877074	41894046	41885560	ENSG00000214691.7	+	lincRNA	KNOWN	AC104654.1	3	3	-0.168253
chr2	41931599	41933723	41932661	ENSG00000234362.5	-	lincRNA	KNOWN	AC104654.2	2	4	-0.242126
chr2	41935368	41954266	41944817	ENSG00000205086.6	-	protein_coding	KNOWN	C2orf91	3	4	-0.218777
chr2	41947056	41947147	41947101	ENSG00000278093.1	-	miRNA	NOVEL	AC013480.1	1	1	-0.242126
chr2	42015625	42025302	42020463	ENSG00000226398.1	-	antisense	KNOWN	AC013480.2	1	3	-0.135419
chr2	42048020	42058528	42053274	ENSG00000162878.12	+	protein_coding	KNOWN	PKDCC	9	8	0.274782
chr2	42143238	42170301	42156769	ENSG00000224875.2	-	antisense	KNOWN	AC083949.1	2	4	0.263001
chr2	42169350	42332548	42250949	ENSG00000143924.18	+	protein_coding	KNOWN	EML4	8	24	-0.174248
chr2	42333546	42425088	42379317	ENSG00000115944.14	-	protein_coding	KNOWN	COX7A2L	8	5	-0.050238
chr2	42440377	42440436	42440406	ENSG00000221300.1	+	snoRNA	NOVEL	SNORD75	1	1	-0.255932
chr2	42442017	42494097	42468057	ENSG00000171126.7	-	protein_coding	KNOWN	KCNG3	2	2	-0.368918
chr2	42463139	42463997	42463568	ENSG00000232526.1	-	processed_pseudogene	KNOWN	VDAC1P13	1	1	-0.420214
chr2	42469817	42470266	42470041	ENSG00000236913.1	+	processed_pseudogene	KNOWN	AC025750.5	1	1	-0.419018
chr2	42494569	42756947	42625758	ENSG00000057935.13	+	protein_coding	KNOWN	MTA3	19	18	-0.044330
chr2	42511570	42511851	42511710	ENSG00000273913.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.020733
chr2	42532766	42533442	42533104	ENSG00000215263.2	-	processed_pseudogene	KNOWN	AC025750.7	1	2	-0.074018
chr2	42680088	42680279	42680183	ENSG00000226523.1	-	processed_pseudogene	KNOWN	AC074375.1	1	1	-0.029024
chr2	42712740	42712847	42712793	ENSG00000200550.1	+	snRNA	KNOWN	RNU6-137P	1	1	-0.187531
chr2	42762481	42764261	42763371	ENSG00000162881.6	-	protein_coding	KNOWN	OXER1	1	1	0.261011
chr2	42767089	42792593	42779841	ENSG00000162882.14	-	protein_coding	KNOWN	HAAO	7	10	0.087145
chr2	42797225	42798712	42797968	ENSG00000226491.1	-	processed_pseudogene	KNOWN	FTOP1	1	3	0.211662
chr2	42826322	42827617	42826969	ENSG00000232202.1	-	processed_pseudogene	KNOWN	AC098824.6	1	2	0.272564
chr2	43001355	43006060	43003707	ENSG00000224739.2	-	lincRNA	KNOWN	AC016735.1	1	3	0.207469
chr2	43027853	43039547	43033700	ENSG00000231826.5	-	lincRNA	KNOWN	AC016735.2	3	6	0.337456
chr2	43041193	43043782	43042487	ENSG00000233978.1	-	lincRNA	KNOWN	AC016735.3	1	2	0.368596
chr2	43091388	43091494	43091441	ENSG00000207087.1	-	snRNA	KNOWN	RNU6-242P	1	1	0.588101
chr2	43097746	43102691	43100218	ENSG00000230587.1	-	lincRNA	KNOWN	AC093609.1	1	2	0.588101
chr2	43222402	43226609	43224505	ENSG00000152518.6	-	protein_coding	KNOWN	ZFP36L2	2	4	0.667736
chr2	43227210	43228855	43228032	ENSG00000279873.2	+	lincRNA	KNOWN	LINC01126	1	1	0.667736
chr2	43229573	43233394	43231483	ENSG00000234936.1	+	antisense	KNOWN	AC010883.5	1	3	0.469533
chr2	43230836	43596046	43413441	ENSG00000115970.18	-	protein_coding	KNOWN	THADA	19	38	0.017699
chr2	43408307	43408412	43408359	ENSG00000252804.1	+	snRNA	KNOWN	RNU6-958P	1	1	-0.320391
chr2	43492032	43492313	43492172	ENSG00000264071.2	+	misc_RNA	KNOWN	RN7SL531P	1	1	-0.391824
chr2	43620878	43620984	43620931	ENSG00000207411.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.024878
chr2	43637273	43767987	43702630	ENSG00000152527.13	+	protein_coding	KNOWN	PLEKHH2	8	30	-0.285160
chr2	43675151	43676322	43675736	ENSG00000223658.7	-	protein_coding	KNOWN	C1GALT1C1L	1	1	-0.349135
chr2	43680465	43681622	43681043	ENSG00000229695.1	-	processed_pseudogene	KNOWN	AC011242.5	1	1	-0.349135
chr2	43772120	43772350	43772235	ENSG00000252490.1	-	misc_RNA	KNOWN	RN7SKP66	1	1	-0.197515
chr2	43774039	43810010	43792024	ENSG00000138036.18	+	protein_coding	KNOWN	DYNC2LI1	10	13	-0.238738
chr2	43812472	43838865	43825668	ENSG00000138075.11	-	protein_coding	KNOWN	ABCG5	4	13	0.021061
chr2	43838964	43878466	43858715	ENSG00000143921.6	+	protein_coding	KNOWN	ABCG8	1	13	0.009387
chr2	43886508	43996005	43941256	ENSG00000138095.18	-	protein_coding	KNOWN	LRPPRC	9	38	-0.204849
chr2	43892690	43892796	43892743	ENSG00000200924.1	+	snRNA	KNOWN	RNU6-1048P	1	1	0.044686
chr2	43904412	43904693	43904552	ENSG00000264047.2	+	misc_RNA	KNOWN	RN7SL455P	1	1	0.044686
chr2	44065488	44065544	44065516	ENSG00000276967.1	-	miRNA	NOVEL	AC019129.2	1	1	0.216883
chr2	44065894	44066154	44066024	ENSG00000219391.1	-	processed_pseudogene	KNOWN	AC019129.1	1	1	0.216883
chr2	44154789	44154895	44154842	ENSG00000252599.1	-	snRNA	KNOWN	RNU6-566P	1	1	-0.350151
chr2	44166266	44166943	44166604	ENSG00000224637.1	+	unprocessed_pseudogene	KNOWN	PDSS1P2	1	1	-0.350151
chr2	44167625	44168859	44168242	ENSG00000273106.1	-	antisense	KNOWN	RP11-559M23.1	1	1	-0.350151
chr2	44167969	44244384	44206176	ENSG00000138032.20	+	protein_coding	KNOWN	PPM1B	11	6	-0.161838
chr2	44270621	44271106	44270863	ENSG00000226972.2	+	processed_pseudogene	KNOWN	RPL12P19	1	1	-0.082404
chr2	44275458	44321494	44298476	ENSG00000138079.13	+	protein_coding	KNOWN	SLC3A1	10	10	-0.026290
chr2	44316281	44361862	44339071	ENSG00000138078.15	-	protein_coding	KNOWN	PREPL	16	15	-0.135150
chr2	44361950	44772592	44567271	ENSG00000143919.14	+	protein_coding	KNOWN	CAMKMT	10	11	-0.372909
chr2	44782046	44782130	44782088	ENSG00000252896.1	-	miRNA	NOVEL	AC067957.1	1	1	-0.388813
chr2	44921077	44939199	44930138	ENSG00000259439.2	-	lincRNA	KNOWN	RP11-89K21.1	5	3	-0.087363
chr2	44927914	44928396	44928155	ENSG00000278957.1	-	TEC	KNOWN	RP11-89K21.2	1	1	-0.108148
chr2	44932320	44932406	44932363	ENSG00000274520.1	+	misc_RNA	NOVEL	Six3os1_1	1	1	-0.067207
chr2	44934055	44934271	44934163	ENSG00000277311.1	+	misc_RNA	NOVEL	Six3os1_2	1	1	-0.067207
chr2	44935294	44935368	44935331	ENSG00000276229.1	+	misc_RNA	NOVEL	Six3os1_3	1	1	-0.067207
chr2	44935585	44935908	44935746	ENSG00000277809.1	+	misc_RNA	NOVEL	Six3os1_4	1	1	-0.067207
chr2	44937426	44937696	44937561	ENSG00000276048.1	+	misc_RNA	NOVEL	Six3os1_5	1	1	-0.067207
chr2	44938833	44939028	44938930	ENSG00000274547.1	+	misc_RNA	NOVEL	Six3os1_6	1	1	-0.067207
chr2	44940045	44940245	44940145	ENSG00000276670.1	+	misc_RNA	NOVEL	Six3os1_7	1	1	-0.067207
chr2	44940154	44941873	44941013	ENSG00000236502.1	-	lincRNA	KNOWN	SIX3-AS1	2	2	-0.067207
chr2	44941898	44946077	44943987	ENSG00000138083.4	+	protein_coding	KNOWN	SIX3	1	2	-0.067207
chr2	44954664	44968762	44961713	ENSG00000225156.2	+	lincRNA	KNOWN	AC012354.6	1	4	0.256379
chr2	44996413	44996873	44996643	ENSG00000231848.1	+	processed_pseudogene	KNOWN	AC012354.8	1	1	-0.200189
chr2	45005161	45009430	45007295	ENSG00000170577.7	-	protein_coding	KNOWN	SIX2	1	2	-0.200189
chr2	45013214	45013668	45013441	ENSG00000231156.1	-	lincRNA	KNOWN	AC093702.1	1	2	0.295320
chr2	45164870	45323295	45244082	ENSG00000205054.6	-	processed_transcript	KNOWN	LINC01121	5	6	-0.134019
chr2	45168583	45169414	45168998	ENSG00000231054.1	+	lincRNA	KNOWN	AC009236.2	1	2	-0.307616
chr2	45388680	45612165	45500422	ENSG00000068784.12	-	protein_coding	KNOWN	SRBD1	5	21	-0.397568
chr2	45569199	45569492	45569345	ENSG00000239396.3	-	misc_RNA	KNOWN	RN7SL414P	1	1	-0.163847
chr2	45651345	46187990	45919667	ENSG00000171132.13	+	protein_coding	KNOWN	PRKCE	15	15	0.197451
chr2	45674701	45675476	45675088	ENSG00000228481.1	-	antisense	KNOWN	U51244.2	1	2	0.118303
chr2	46003942	46004309	46004125	ENSG00000233829.1	-	processed_pseudogene	KNOWN	AC017078.1	1	1	0.229495
chr2	46078015	46078828	46078421	ENSG00000232696.1	-	antisense	KNOWN	AC017006.2	1	2	0.293250
chr2	46166789	46167978	46167383	ENSG00000231336.1	-	antisense	KNOWN	AC017006.3	1	2	0.227455
chr2	46256860	46257177	46257018	ENSG00000233335.1	-	processed_pseudogene	KNOWN	AC016696.1	1	1	-0.056710
chr2	46266690	46266971	46266830	ENSG00000278764.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.056710
chr2	46293667	46386703	46340185	ENSG00000116016.13	+	protein_coding	KNOWN	EPAS1	10	16	0.262876
chr2	46392297	46394167	46393232	ENSG00000228100.1	-	lincRNA	KNOWN	AC016912.3	1	3	0.259343
chr2	46429190	46484425	46456807	ENSG00000187600.12	+	protein_coding	KNOWN	TMEM247	5	5	0.236361
chr2	46448224	46448511	46448367	ENSG00000241791.3	-	misc_RNA	KNOWN	RN7SL817P	1	1	0.261917
chr2	46490750	46542557	46516653	ENSG00000250565.6	-	protein_coding	KNOWN	ATP6V1E2	6	5	0.217354
chr2	46499731	46501278	46500504	ENSG00000253515.1	+	antisense	KNOWN	RP11-417F21.2	1	2	0.335263
chr2	46541806	46583121	46562463	ENSG00000119729.10	+	protein_coding	KNOWN	RHOQ	9	7	0.237237
chr2	46568256	46580238	46574247	ENSG00000250116.2	-	antisense	KNOWN	RP11-417F21.1	1	2	0.126951
chr2	46580937	46617119	46599028	ENSG00000151665.12	-	protein_coding	KNOWN	PIGF	7	7	-0.128943
chr2	46616416	46625742	46621079	ENSG00000119878.5	+	protein_coding	KNOWN	CRIPT	2	5	-0.133428
chr2	46668870	46670778	46669824	ENSG00000279254.1	+	TEC	KNOWN	RP11-536C12.1	1	1	0.435411
chr2	46698952	46763129	46731040	ENSG00000171150.7	+	protein_coding	KNOWN	SOCS5	2	2	0.000228
chr2	46777783	46780245	46779014	ENSG00000260977.1	+	lincRNA	KNOWN	RP11-333I13.1	1	1	0.108202
chr2	46816668	46822657	46819662	ENSG00000222005.8	+	lincRNA	KNOWN	LINC01118	3	4	0.328528
chr2	46816697	46859007	46837852	ENSG00000239332.5	+	lincRNA	KNOWN	LINC01119	4	3	0.489928
chr2	46852020	46853496	46852758	ENSG00000226548.1	-	lincRNA	KNOWN	AC016722.3	1	2	0.602026
chr2	46899275	46908678	46903976	ENSG00000228925.1	+	antisense	KNOWN	AC016722.4	1	2	0.459724
chr2	46901870	46941855	46921862	ENSG00000180398.11	-	protein_coding	KNOWN	MCFD2	17	5	0.352802
chr2	46916157	47076137	46996147	ENSG00000068724.15	+	protein_coding	KNOWN	TTC7A	12	21	0.689507
chr2	46956615	46956888	46956751	ENSG00000272814.1	-	antisense	KNOWN	RP11-15I20.1	1	1	0.701477
chr2	47035279	47040524	47037901	ENSG00000233845.1	-	antisense	KNOWN	AC093732.1	1	2	0.817027
chr2	47045538	47155378	47100458	ENSG00000239605.8	-	protein_coding	KNOWN	C2orf61	6	7	0.606498
chr2	47060224	47060466	47060345	ENSG00000281003.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.945443
chr2	47065941	47176511	47121226	ENSG00000273269.1	-	protein_coding	KNOWN	RP11-761B3.1	1	9	0.464735
chr2	47067822	47071204	47069513	ENSG00000225187.1	+	antisense	KNOWN	AC073283.7	1	2	0.945560
chr2	47160082	47176601	47168341	ENSG00000143933.16	-	protein_coding	KNOWN	CALM2	9	7	0.154167
chr2	47192405	47345074	47268739	ENSG00000234690.6	-	lincRNA	KNOWN	AC073283.4	5	5	0.348657
chr2	47225794	47239225	47232509	ENSG00000226087.1	+	lincRNA	KNOWN	AC106869.2	2	2	0.385770
chr2	47331060	47344517	47337788	ENSG00000236824.1	+	lincRNA	KNOWN	BCYRN1	1	1	0.263535
chr2	47345158	47387601	47366379	ENSG00000119888.10	+	protein_coding	KNOWN	EPCAM	6	11	0.085938
chr2	47359505	47359777	47359641	ENSG00000222685.1	-	misc_RNA	KNOWN	RN7SKP119	1	1	0.091992
chr2	47377675	47377770	47377722	ENSG00000207923.1	+	miRNA	KNOWN	MIR559	1	1	0.030216
chr2	47383160	47383421	47383290	ENSG00000277396.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.030216
chr2	47402969	47562311	47482640	ENSG00000095002.12	+	protein_coding	KNOWN	MSH2	11	17	0.092084
chr2	47516581	47570939	47543760	ENSG00000184261.4	-	protein_coding	KNOWN	KCNK12	2	2	0.185495
chr2	47527537	47535199	47531368	ENSG00000235760.3	+	antisense	KNOWN	HCG2040054	2	3	0.242200
chr2	47690716	47691246	47690981	ENSG00000230979.3	-	processed_pseudogene	KNOWN	AC079250.1	1	1	-0.073067
chr2	47695530	47810101	47752815	ENSG00000116062.14	+	protein_coding	KNOWN	MSH6	15	13	0.140830
chr2	47705468	47705979	47705723	ENSG00000224443.1	+	processed_pseudogene	KNOWN	AC006509.4	1	2	-0.073067
chr2	47731402	47732035	47731718	ENSG00000224058.2	-	processed_pseudogene	KNOWN	AC006509.7	1	1	0.314384
chr2	47789316	47905793	47847554	ENSG00000138081.19	-	protein_coding	KNOWN	FBXO11	11	23	-0.070443
chr2	47797826	47798091	47797958	ENSG00000235369.1	-	processed_pseudogene	KNOWN	RPL36AP15	1	1	0.044994
chr2	47883455	47883909	47883682	ENSG00000236549.1	+	processed_pseudogene	KNOWN	AC079807.3	1	1	-0.190408
chr2	47905678	47907810	47906744	ENSG00000233230.1	+	antisense	KNOWN	AC079807.2	3	2	0.004529
chr2	47939738	47940218	47939978	ENSG00000226473.2	-	processed_pseudogene	KNOWN	AC079807.1	1	1	-0.602794
chr2	47941696	48240983	48091339	ENSG00000230773.6	-	lincRNA	KNOWN	AC079807.4	2	11	-0.293168
chr2	47989625	47990526	47990075	ENSG00000275423.1	+	processed_pseudogene	KNOWN	RP11-429P7.1	1	1	-0.594332
chr2	48217575	48217899	48217737	ENSG00000201010.1	+	misc_RNA	KNOWN	RN7SKP224	1	1	-0.195905
chr2	48314637	48379294	48346965	ENSG00000170802.15	+	protein_coding	KNOWN	FOXN2	3	7	-0.369699
chr2	48340687	48340826	48340756	ENSG00000251889.1	-	snRNA	KNOWN	RNU4-49P	1	1	-0.449309
chr2	48440043	48440597	48440320	ENSG00000272663.1	-	lincRNA	KNOWN	RP11-191L17.1	1	1	-0.089074
chr2	48440598	48515391	48477994	ENSG00000162869.15	+	protein_coding	KNOWN	PPP1R21	9	22	-0.135902
chr2	48501922	48502024	48501973	ENSG00000202227.1	-	snRNA	KNOWN	RNU6-282P	1	1	-0.107617
chr2	48529383	48598513	48563948	ENSG00000243244.5	+	protein_coding	KNOWN	STON1	4	5	-0.055317
chr2	48529925	48776517	48653221	ENSG00000068781.21	+	protein_coding	KNOWN	STON1-GTF2A1L	6	11	-0.357194
chr2	48617798	48733148	48675473	ENSG00000242441.7	+	protein_coding	KNOWN	GTF2A1L	7	9	-0.516655
chr2	48632291	48755724	48694007	ENSG00000279956.1	-	protein_coding	KNOWN	RP11-310N16.1	1	13	-0.526822
chr2	48632856	48633353	48633104	ENSG00000239995.2	-	transcribed_processed_pseudogene	KNOWN	TPT1P11	1	1	-0.670211
chr2	48686775	48755730	48721252	ENSG00000138039.14	-	protein_coding	KNOWN	LHCGR	6	11	-0.449118
chr2	48780602	48780895	48780748	ENSG00000232285.1	+	processed_pseudogene	KNOWN	TCEB2P3	1	1	-0.680286
chr2	48809340	49419013	49114176	ENSG00000282890.1	+	lincRNA	KNOWN	RP11-460M2.1	1	5	-0.415232
chr2	48915267	48916530	48915898	ENSG00000214602.3	-	processed_pseudogene	KNOWN	CTBP2P5	1	1	-0.098339
chr2	48962157	49154537	49058347	ENSG00000170820.11	-	protein_coding	KNOWN	FSHR	5	10	-0.420696
chr2	49202126	49451896	49327011	ENSG00000282998.1	-	lincRNA	KNOWN	RP11-152D8.1	2	7	-0.476768
chr2	49233794	49233899	49233846	ENSG00000206915.1	-	snRNA	KNOWN	RNU6-439P	1	1	-0.556934
chr2	49563398	49595122	49579260	ENSG00000282828.1	+	lincRNA	KNOWN	RP11-443F4.1	1	3	-0.682610
chr2	49878623	49879363	49878993	ENSG00000234253.1	+	processed_pseudogene	KNOWN	RPL7P13	1	1	-0.575932
chr2	49888868	49888986	49888927	ENSG00000212580.1	-	snoRNA	NOVEL	SNORA75	1	1	-0.575932
chr2	49918505	51225564	50572034	ENSG00000179915.21	-	protein_coding	KNOWN	NRXN1	42	24	-0.662641
chr2	50381657	50381751	50381704	ENSG00000276506.1	+	miRNA	NOVEL	AC068715.1	1	1	-0.630474
chr2	50588690	50589415	50589052	ENSG00000230327.1	-	processed_pseudogene	KNOWN	MTCO1P42	1	1	-0.729302
chr2	50620963	50632993	50626978	ENSG00000283058.1	+	antisense	KNOWN	RP11-358H12.1	1	4	-0.601208
chr2	50696172	50696262	50696217	ENSG00000216191.1	-	miRNA	KNOWN	MIR8485	1	1	-0.713505
chr2	50798964	50799055	50799009	ENSG00000215968.2	-	miRNA	NOVEL	AC007560.2	1	1	-0.667000
chr2	50829442	50829678	50829560	ENSG00000238165.1	-	processed_pseudogene	KNOWN	AC007560.1	1	1	-0.725144
chr2	50943286	50943396	50943341	ENSG00000274815.1	+	miRNA	NOVEL	AC007682.3	1	1	-0.881373
chr2	50961245	50961333	50961289	ENSG00000272385.1	+	miRNA	NOVEL	AC007682.2	1	1	-0.715363
chr2	51027953	51028097	51028025	ENSG00000281171.1	+	miRNA	NOVEL	AC007682.4	1	1	-0.932670
chr2	51032601	52407917	51720259	ENSG00000231918.1	+	lincRNA	KNOWN	AC007682.1	1	11	-0.556720
chr2	51435122	51435218	51435170	ENSG00000222692.1	-	miRNA	NOVEL	AC007402.1	1	1	-0.541226
chr2	51511058	51511483	51511270	ENSG00000224344.1	+	processed_pseudogene	KNOWN	KNOP1P3	1	1	-0.430429
chr2	51775258	51775402	51775330	ENSG00000223710.1	-	unprocessed_pseudogene	KNOWN	CRYGGP	1	1	-0.518062
chr2	51925692	51925833	51925762	ENSG00000230840.1	-	processed_pseudogene	KNOWN	AC097463.2	1	1	-0.699766
chr2	51926882	51927362	51927122	ENSG00000226366.1	-	processed_pseudogene	KNOWN	AC097463.1	1	1	-0.699766
chr2	52071355	52077197	52074276	ENSG00000236538.1	+	processed_pseudogene	KNOWN	ZNF863P	1	3	-0.648040
chr2	52297995	52298096	52298045	ENSG00000202195.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.333314
chr2	52373118	52390012	52381565	ENSG00000225444.1	+	lincRNA	KNOWN	AC087073.1	1	2	-0.967808
chr2	52474073	52474411	52474242	ENSG00000225842.1	-	processed_pseudogene	KNOWN	AC139712.1	1	1	-0.899395
chr2	52494688	52500752	52497720	ENSG00000236837.1	-	lincRNA	KNOWN	AC139712.4	1	4	-0.250896
chr2	52570648	52572522	52571585	ENSG00000204993.3	+	processed_pseudogene	KNOWN	AC139712.2	1	1	-0.210935
chr2	52629743	52630078	52629910	ENSG00000233083.1	+	processed_pseudogene	KNOWN	FTH1P6	1	2	-0.229819
chr2	52679750	52679840	52679795	ENSG00000216054.2	+	miRNA	NOVEL	AC019196.1	1	1	-0.609485
chr2	52702522	52702615	52702568	ENSG00000264975.1	-	miRNA	KNOWN	MIR4431	1	1	-0.471144
chr2	52722677	52910020	52816348	ENSG00000228033.5	-	lincRNA	KNOWN	AC010967.2	2	5	-0.493877
chr2	52864235	52866631	52865433	ENSG00000232604.1	+	lincRNA	KNOWN	AC010967.3	1	2	-0.443605
chr2	52883243	52883455	52883349	ENSG00000232668.1	+	processed_pseudogene	KNOWN	AC010967.1	1	1	-0.414070
chr2	53422419	53422506	53422462	ENSG00000276117.1	+	miRNA	NOVEL	AC069157.2	1	1	-0.395123
chr2	53470447	53470629	53470538	ENSG00000251942.1	-	scaRNA	NOVEL	SCARNA16	1	1	-0.218650
chr2	53486144	53486280	53486212	ENSG00000223897.1	-	processed_pseudogene	KNOWN	AC069157.1	1	1	-0.218650
chr2	53532672	53787610	53660141	ENSG00000115239.21	-	protein_coding	KNOWN	ASB3	13	10	-0.153432
chr2	53570374	53570480	53570427	ENSG00000207456.1	-	snRNA	KNOWN	RNU6-997P	1	1	-0.339348
chr2	53670293	53860160	53765226	ENSG00000270898.5	-	protein_coding	KNOWN	GPR75-ASB3	3	10	0.008617
chr2	53767792	53775196	53771494	ENSG00000143942.4	+	protein_coding	KNOWN	CHAC2	1	3	-0.016429
chr2	53787044	53818819	53802931	ENSG00000068912.13	+	protein_coding	KNOWN	ERLEC1	4	14	0.019691
chr2	53849122	53849205	53849163	ENSG00000265452.1	-	miRNA	KNOWN	MIR3682	1	1	0.323317
chr2	53852913	53859989	53856451	ENSG00000119737.5	-	protein_coding	KNOWN	GPR75	1	2	0.411982
chr2	53864067	53970840	53917453	ENSG00000068878.14	-	protein_coding	KNOWN	PSME4	9	47	-0.070935
chr2	53970838	54305300	54138069	ENSG00000170634.12	+	protein_coding	KNOWN	ACYP2	9	7	0.026756
chr2	54029552	54030682	54030117	ENSG00000235937.1	-	processed_pseudogene	KNOWN	AC008280.1	1	2	0.132685
chr2	54051334	54051760	54051547	ENSG00000233266.1	+	processed_pseudogene	KNOWN	HMGB1P31	1	1	0.387768
chr2	54079974	54080280	54080127	ENSG00000241114.1	-	processed_pseudogene	KNOWN	AC008280.3	1	1	-0.068473
chr2	54082554	54085066	54083810	ENSG00000272156.1	+	lincRNA	KNOWN	RP11-477N3.1	1	2	-0.068473
chr2	54166944	54167007	54166975	ENSG00000252934.1	-	snRNA	KNOWN	RNU7-172P	1	1	0.119128
chr2	54253184	54256272	54254728	ENSG00000178021.10	-	protein_coding	KNOWN	TSPYL6	1	1	0.161954
chr2	54330034	54383742	54356888	ENSG00000177994.15	+	protein_coding	KNOWN	C2orf73	8	6	-0.081693
chr2	54456285	54671445	54563865	ENSG00000115306.15	+	protein_coding	KNOWN	SPTBN1	7	38	0.145125
chr2	54516048	54540697	54528372	ENSG00000228108.1	-	antisense	KNOWN	AC092839.3	1	4	0.230253
chr2	54529343	54529801	54529572	ENSG00000237887.1	+	processed_pseudogene	KNOWN	RPL23AP32	1	1	0.156481
chr2	54545368	54546677	54546022	ENSG00000234943.2	-	antisense	KNOWN	AC092839.4	1	2	0.326457
chr2	54579018	54579119	54579068	ENSG00000274648.1	+	miRNA	NOVEL	AC093110.1	1	1	0.099686
chr2	54661011	54680045	54670528	ENSG00000238018.2	-	antisense	KNOWN	AC093110.3	2	4	0.233813
chr2	54723499	54972025	54847762	ENSG00000214595.11	+	protein_coding	KNOWN	EML6	9	41	-0.016119
chr2	54747103	54748404	54747753	ENSG00000231334.1	-	antisense	KNOWN	AC104781.1	1	2	0.024529
chr2	54850289	54850352	54850320	ENSG00000252507.1	+	snRNA	KNOWN	RNU7-81P	1	1	0.009998
chr2	54972187	55112621	55042404	ENSG00000115310.17	-	protein_coding	KNOWN	RTN4	15	9	0.034569
chr2	55014418	55014521	55014469	ENSG00000200086.1	-	snRNA	KNOWN	RNU6-433P	1	1	0.062448
chr2	55108710	55108803	55108756	ENSG00000266376.1	+	miRNA	NOVEL	AC093165.1	1	1	0.222886
chr2	55174791	55232563	55203677	ENSG00000162994.15	-	protein_coding	KNOWN	CLHC1	13	13	0.094976
chr2	55214387	55216126	55215256	ENSG00000203327.2	-	antisense	KNOWN	AC012358.7	1	2	0.061830
chr2	55224280	55225908	55225094	ENSG00000227799.1	+	processed_pseudogene	KNOWN	AC012358.4	1	2	0.061830
chr2	55231903	55235853	55233878	ENSG00000143947.12	+	protein_coding	KNOWN	RPS27A	10	6	0.100307
chr2	55236595	55269347	55252971	ENSG00000085760.14	-	protein_coding	KNOWN	MTIF2	12	16	0.220811
chr2	55282319	55284522	55283420	ENSG00000162997.15	+	unitary_pseudogene	KNOWN	PRORSD1P	3	2	0.238213
chr2	55282350	55346049	55314199	ENSG00000240401.8	+	antisense	KNOWN	AC012358.8	26	5	-0.099562
chr2	55286018	55286128	55286073	ENSG00000206964.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.238213
chr2	55287842	55419921	55353881	ENSG00000115355.15	-	protein_coding	KNOWN	CCDC88A	14	34	-0.148235
chr2	55435156	55435622	55435389	ENSG00000233594.2	-	processed_pseudogene	KNOWN	BTF3P5	1	1	0.108111
chr2	55451004	55451099	55451051	ENSG00000238619.1	-	snRNA	KNOWN	RNU6-775P	1	1	-0.072639
chr2	55456106	55456204	55456155	ENSG00000238493.1	-	snRNA	KNOWN	RNU6-221P	1	1	-0.072639
chr2	55472744	55472841	55472792	ENSG00000264849.1	+	miRNA	NOVEL	AC019198.1	1	1	0.083818
chr2	55499950	55500055	55500002	ENSG00000239189.1	+	snRNA	KNOWN	RNU6-634P	1	1	0.039524
chr2	55519604	55545879	55532741	ENSG00000163001.11	+	protein_coding	KNOWN	CFAP36	7	11	-0.120042
chr2	55547292	55618880	55583086	ENSG00000275052.4	-	protein_coding	KNOWN	PPP4R3B	6	17	-0.039507
chr2	55565703	55565850	55565776	ENSG00000212175.1	+	snoRNA	NOVEL	SNORA12	1	1	-0.323046
chr2	55617909	55618373	55618141	ENSG00000272606.1	+	antisense	KNOWN	RP11-554J4.1	1	1	0.172162
chr2	55634265	55693910	55664087	ENSG00000138035.14	-	protein_coding	KNOWN	PNPT1	7	29	0.092755
chr2	55865967	55924139	55895053	ENSG00000115380.19	-	protein_coding	KNOWN	EFEMP1	14	12	-0.021395
chr2	55951654	55952014	55951834	ENSG00000202344.1	-	misc_RNA	KNOWN	RN7SKP208	1	1	-0.249625
chr2	55952158	56181652	56066905	ENSG00000272180.1	+	lincRNA	KNOWN	RP11-481J13.1	1	7	-0.205895
chr2	55963191	56047326	56005258	ENSG00000226702.1	-	lincRNA	KNOWN	MIR217HG	1	3	-0.345940
chr2	55982952	55983063	55983007	ENSG00000207548.2	-	miRNA	KNOWN	MIR217	1	1	-0.271699
chr2	55988950	55989059	55989004	ENSG00000207798.1	-	miRNA	KNOWN	MIR216A	1	1	-0.271699
chr2	56000714	56000795	56000754	ENSG00000211520.2	-	miRNA	KNOWN	MIR216B	1	1	-0.278991
chr2	56077417	56090382	56083899	ENSG00000229805.1	-	lincRNA	KNOWN	AC011306.1	1	2	-0.399740
chr2	56147630	56386171	56266900	ENSG00000271894.1	+	processed_transcript	KNOWN	RP11-482H16.1	1	4	-0.199939
chr2	56173534	56185770	56179652	ENSG00000233251.7	-	antisense	KNOWN	AC007743.1	3	4	-0.332696
chr2	56184123	56386173	56285148	ENSG00000055813.5	+	protein_coding	KNOWN	CCDC85A	1	6	-0.210462
chr2	56235217	56235330	56235273	ENSG00000199395.1	-	rRNA	KNOWN	RNA5SP93	1	1	-0.240278
chr2	56750300	56750563	56750431	ENSG00000231570.1	+	processed_pseudogene	KNOWN	AC008173.1	1	1	-0.250240
chr2	57048350	57049336	57048843	ENSG00000271115.1	-	processed_pseudogene	KNOWN	RP11-443I9.1	1	1	-0.350718
chr2	57192736	57192803	57192769	ENSG00000276201.1	-	miRNA	NOVEL	AC009406.1	1	1	-0.273293
chr2	57193499	57193566	57193532	ENSG00000277884.1	-	miRNA	NOVEL	AC009406.2	1	1	-0.273293
chr2	57429548	57430693	57430120	ENSG00000270569.1	-	processed_pseudogene	KNOWN	RP11-127H13.1	1	3	-0.584305
chr2	57544535	57544599	57544567	ENSG00000212168.1	+	snoRNA	NOVEL	SNORD78	1	1	-0.576557
chr2	57755428	57766052	57760740	ENSG00000271615.1	+	transcribed_processed_pseudogene	KNOWN	ACTG1P22	2	2	-0.502557
chr2	57907651	58159920	58033785	ENSG00000028116.16	+	protein_coding	KNOWN	VRK2	9	16	-0.475670
chr2	58062581	58062665	58062623	ENSG00000251738.1	-	miRNA	NOVEL	AC073215.1	1	1	-0.232206
chr2	58159243	58241372	58200307	ENSG00000115392.11	-	protein_coding	KNOWN	FANCL	10	14	-0.595668
chr2	58241349	58241686	58241517	ENSG00000273063.1	+	antisense	KNOWN	RP11-334G22.1	1	1	-0.795533
chr2	58251440	58252525	58251982	ENSG00000233426.3	+	processed_pseudogene	KNOWN	EIF3FP3	1	1	-0.642348
chr2	58275877	58296548	58286212	ENSG00000225226.1	+	lincRNA	KNOWN	AC007250.4	1	3	-0.578898
chr2	58427799	59063766	58745782	ENSG00000233723.7	+	lincRNA	KNOWN	LINC01122	8	14	-0.530704
chr2	58460292	58462032	58461162	ENSG00000231043.3	-	processed_pseudogene	KNOWN	AC007238.1	1	1	-1.100653
chr2	58527842	58527903	58527872	ENSG00000274548.1	+	miRNA	NOVEL	AC007367.1	1	1	-0.615827
chr2	59217708	59279400	59248554	ENSG00000222030.1	+	lincRNA	KNOWN	AC007131.1	1	3	-0.464093
chr2	59218680	60100200	59659440	ENSG00000271955.1	-	lincRNA	KNOWN	RP11-444A22.1	1	4	-0.504927
chr2	59238714	59733396	59486055	ENSG00000233891.7	-	lincRNA	KNOWN	AC007131.2	7	5	-0.554595
chr2	59241621	59241702	59241661	ENSG00000221653.1	-	miRNA	NOVEL	AC007131.3	1	1	-0.431570
chr2	59435213	59442261	59438737	ENSG00000231815.1	+	lincRNA	KNOWN	AC007179.1	1	3	-0.429174
chr2	59514890	59515124	59515007	ENSG00000270447.1	+	processed_pseudogene	KNOWN	RP11-569H17.1	1	1	-0.407579
chr2	59532984	59533075	59533029	ENSG00000252455.2	-	miRNA	NOVEL	AC007179.2	1	1	-0.815815
chr2	59565835	59565921	59565878	ENSG00000275742.1	+	miRNA	NOVEL	AC007006.1	1	1	-0.518506
chr2	59647621	59647723	59647672	ENSG00000200101.1	+	snRNA	KNOWN	RNU6-508P	1	1	-0.285482
chr2	59694762	59694869	59694815	ENSG00000252726.1	+	rRNA	KNOWN	RNA5SP94	1	1	-0.831657
chr2	60350595	60353016	60351805	ENSG00000228590.1	-	lincRNA	KNOWN	AC007381.3	1	2	-0.076984
chr2	60359216	60391375	60375295	ENSG00000223929.1	-	lincRNA	KNOWN	MIR4432HG	2	4	-0.055955
chr2	60384605	60384763	60384684	ENSG00000200807.1	+	snRNA	KNOWN	RNU1-32P	1	1	-0.038069
chr2	60387362	60387445	60387403	ENSG00000266078.1	-	miRNA	KNOWN	MIR4432	1	1	-0.038069
chr2	60417838	60417905	60417871	ENSG00000276812.1	-	miRNA	NOVEL	AC007381.1	1	1	-0.094421
chr2	60451167	60553567	60502367	ENSG00000119866.20	-	protein_coding	KNOWN	BCL11A	11	7	-0.091307
chr2	60495686	60499964	60497825	ENSG00000233953.1	+	antisense	KNOWN	AC009970.1	1	3	-0.137743
chr2	60640705	60641002	60640853	ENSG00000242158.3	+	misc_RNA	KNOWN	RN7SL361P	1	1	-0.342411
chr2	60682873	60683244	60683058	ENSG00000271134.1	-	processed_pseudogene	KNOWN	RP11-416L21.2	1	1	0.049431
chr2	60711484	60711920	60711702	ENSG00000213495.3	+	processed_pseudogene	KNOWN	RP11-416L21.1	1	1	0.350304
chr2	60719640	60719741	60719690	ENSG00000252718.1	+	snRNA	KNOWN	RNU6-612P	1	1	0.350304
chr2	60734895	60735715	60735305	ENSG00000271707.1	-	processed_pseudogene	KNOWN	ATP1B3P1	1	1	-0.293130
chr2	60756230	60802085	60779157	ENSG00000115421.12	+	protein_coding	KNOWN	PAPOLG	7	22	-0.072458
chr2	60825132	60881314	60853223	ENSG00000228414.6	-	lincRNA	KNOWN	LINC01185	2	4	0.051099
chr2	60831664	60831929	60831796	ENSG00000241524.3	-	misc_RNA	KNOWN	RN7SL632P	1	1	0.145931
chr2	60852260	60852743	60852501	ENSG00000237024.1	+	processed_pseudogene	KNOWN	RPL21P33	1	1	0.060628
chr2	60881521	60931610	60906565	ENSG00000162924.13	+	protein_coding	KNOWN	REL	2	11	-0.216383
chr2	60911303	60911442	60911372	ENSG00000201076.1	+	snRNA	KNOWN	RNU4-51P	1	1	-0.155936
chr2	60925909	60931610	60928759	ENSG00000267520.2	+	3prime_overlapping_ncrna	KNOWN	RP11-373L24.1	1	1	-0.159279
chr2	60936819	60938049	60937434	ENSG00000237522.1	-	processed_pseudogene	KNOWN	NONOP2	1	1	-0.167767
chr2	60938204	60938604	60938404	ENSG00000232713.2	-	processed_pseudogene	KNOWN	AC010733.5	1	1	-0.167767
chr2	60940222	61018259	60979240	ENSG00000162927.13	-	protein_coding	KNOWN	PUS10	6	18	-0.126447
chr2	60998752	60998888	60998820	ENSG00000222251.1	+	rRNA	KNOWN	RNA5SP95	1	1	-0.288913
chr2	61017225	61051990	61034607	ENSG00000162928.8	+	protein_coding	KNOWN	PEX13	5	4	-0.059324
chr2	61065871	61138034	61101952	ENSG00000162929.13	+	protein_coding	KNOWN	KIAA1841	11	22	0.040841
chr2	61115787	61164825	61140306	ENSG00000274769.1	+	processed_transcript	KNOWN	RP11-493E12.3	1	8	0.022537
chr2	61141592	61144969	61143280	ENSG00000212978.6	-	processed_transcript	KNOWN	AC016747.3	4	3	-0.298468
chr2	61145068	61164829	61154948	ENSG00000237651.6	+	protein_coding	KNOWN	C2orf74	6	5	0.302465
chr2	61151433	61162105	61156769	ENSG00000271889.1	-	lincRNA	KNOWN	RP11-493E12.1	3	2	0.502276
chr2	61177418	61191203	61184310	ENSG00000173209.22	+	protein_coding	KNOWN	AHSA2	11	9	0.365715
chr2	61177554	61177636	61177595	ENSG00000280672.1	+	miRNA	NOVEL	AC016747.1	1	1	0.387768
chr2	61187463	61470769	61329116	ENSG00000115464.14	-	protein_coding	KNOWN	USP34	22	80	0.056590
chr2	61199979	61200769	61200374	ENSG00000273302.1	+	sense_intronic	KNOWN	RP11-493E12.2	1	1	0.135276
chr2	61249780	61250621	61250200	ENSG00000271146.1	+	processed_pseudogene	KNOWN	RP11-479F13.1	1	3	-0.247215
chr2	61416887	61417197	61417042	ENSG00000234624.2	-	processed_pseudogene	KNOWN	AC016894.1	1	1	0.275058
chr2	61417244	61417378	61417311	ENSG00000206937.1	-	snoRNA	KNOWN	SNORA70B	1	1	0.275058
chr2	61471188	61484130	61477659	ENSG00000270820.5	+	antisense	KNOWN	RP11-355B11.2	5	4	0.522296
chr2	61477849	61538626	61508237	ENSG00000082898.16	-	protein_coding	KNOWN	XPO1	24	26	0.351206
chr2	61555360	61555458	61555409	ENSG00000266768.1	+	miRNA	NOVEL	AC016727.1	1	1	-0.094709
chr2	61575774	61576394	61576084	ENSG00000271243.1	+	processed_pseudogene	KNOWN	RP11-355B11.1	1	1	0.173419
chr2	61589498	61589663	61589580	ENSG00000226884.1	-	processed_pseudogene	KNOWN	AC016727.3	1	1	0.173419
chr2	61605616	61605722	61605669	ENSG00000206973.1	+	snRNA	KNOWN	RNU6-1145P	1	1	0.100657
chr2	61710076	61710978	61710527	ENSG00000213486.3	-	processed_pseudogene	KNOWN	AC108039.1	1	2	-0.045512
chr2	61803143	61803388	61803265	ENSG00000227361.1	+	processed_pseudogene	KNOWN	RPS24P7	1	1	0.128986
chr2	61820208	61820566	61820387	ENSG00000229831.2	+	processed_pseudogene	KNOWN	AC108039.3	1	1	0.216798
chr2	61824854	61854143	61839498	ENSG00000170264.12	-	protein_coding	KNOWN	FAM161A	7	8	-0.062351
chr2	61856695	61857055	61856875	ENSG00000230702.1	+	processed_pseudogene	KNOWN	RP11-681L4.1	1	1	-0.067075
chr2	61858137	61860298	61859217	ENSG00000277498.1	+	unprocessed_pseudogene	KNOWN	RP11-681L4.2	1	2	-0.067075
chr2	61868089	61888804	61878446	ENSG00000115484.14	-	protein_coding	KNOWN	CCT4	4	14	-0.019732
chr2	61868432	61886082	61877257	ENSG00000236498.1	+	antisense	KNOWN	AC107081.5	1	2	-0.019553
chr2	61888724	62147247	62017985	ENSG00000173163.10	+	protein_coding	KNOWN	COMMD1	8	4	-0.039196
chr2	61928634	61928704	61928669	ENSG00000278523.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.157955
chr2	61929691	61930719	61930205	ENSG00000280544.1	-	protein_coding	KNOWN	AC107081.1	1	4	0.089174
chr2	62069447	62146881	62108164	ENSG00000229839.6	-	antisense	KNOWN	AC018462.2	2	8	-0.221585
chr2	62146413	62147153	62146783	ENSG00000242735.1	+	processed_pseudogene	KNOWN	RPSAP26	1	1	-0.134436
chr2	62168862	62171163	62170012	ENSG00000271657.1	+	processed_pseudogene	KNOWN	RP11-270B14.1	1	2	-0.220582
chr2	62196113	62224731	62210422	ENSG00000170340.10	+	protein_coding	KNOWN	B3GNT2	2	2	0.179628
chr2	62205826	62205917	62205871	ENSG00000266097.1	+	miRNA	KNOWN	MIR5192	1	1	0.319225
chr2	62262387	62262671	62262529	ENSG00000239958.3	-	misc_RNA	KNOWN	RN7SL51P	1	1	-0.103139
chr2	62348948	62350739	62349843	ENSG00000270335.1	-	processed_pseudogene	KNOWN	RP11-642D6.1	1	2	0.208630
chr2	62463127	62464070	62463598	ENSG00000228541.1	+	lincRNA	KNOWN	AC093159.1	1	2	0.261917
chr2	62491178	62491468	62491323	ENSG00000241625.3	+	misc_RNA	KNOWN	RN7SL18P	1	1	0.074610
chr2	62500221	62511894	62506057	ENSG00000186889.9	-	protein_coding	KNOWN	TMEM17	3	4	0.064045
chr2	62507545	62507823	62507684	ENSG00000233702.1	-	processed_pseudogene	KNOWN	AC107083.1	1	1	0.074610
chr2	62532583	62533059	62532821	ENSG00000229503.1	-	processed_pseudogene	KNOWN	AC092155.1	1	1	-0.112699
chr2	62552463	62553434	62552948	ENSG00000232144.1	-	processed_pseudogene	KNOWN	PSAT1P2	1	1	0.007103
chr2	62561058	62561423	62561240	ENSG00000230595.1	-	processed_pseudogene	KNOWN	RSL24D1P2	1	1	0.007103
chr2	62590255	62662654	62626454	ENSG00000226622.5	-	antisense	KNOWN	AC092155.4	2	8	-0.046175
chr2	62673851	63046487	62860169	ENSG00000115504.14	+	protein_coding	KNOWN	EHBP1	20	25	-0.272813
chr2	62726636	62726740	62726688	ENSG00000252436.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.177615
chr2	62826064	62858438	62842251	ENSG00000226605.1	-	antisense	KNOWN	AC007098.1	1	2	-0.526232
chr2	62939916	62940282	62940099	ENSG00000237162.1	+	processed_pseudogene	KNOWN	RP11-443F16.1	1	1	-0.216130
chr2	63043922	63048640	63046281	ENSG00000231609.5	-	antisense	KNOWN	AC009501.4	4	4	-0.133568
chr2	63050057	63057836	63053946	ENSG00000115507.9	+	protein_coding	KNOWN	OTX1	6	5	0.342800
chr2	63083008	63087322	63085165	ENSG00000270437.1	+	processed_pseudogene	KNOWN	RP11-511I11.2	1	2	-0.613265
chr2	63108118	63108429	63108273	ENSG00000232403.1	-	processed_pseudogene	KNOWN	RP11-511I11.1	1	1	-0.532863
chr2	63117851	63119542	63118696	ENSG00000242412.1	-	transcribed_processed_pseudogene	KNOWN	DBIL5P2	2	1	-0.632374
chr2	63121383	63827843	63474613	ENSG00000143951.15	-	protein_coding	KNOWN	WDPCP	17	18	-0.371477
chr2	63232453	63233577	63233015	ENSG00000233716.1	-	processed_pseudogene	KNOWN	AC074367.1	1	1	-0.673543
chr2	63517892	63519268	63518580	ENSG00000279485.1	-	TEC	KNOWN	RP11-391A7.1	1	1	-0.176943
chr2	63588609	63607197	63597903	ENSG00000014641.17	+	protein_coding	KNOWN	MDH1	16	9	-0.370035
chr2	63609247	63610211	63609729	ENSG00000281071.1	-	protein_coding	KNOWN	AC016734.1	1	3	-0.388032
chr2	63622178	63622831	63622504	ENSG00000228305.2	-	processed_pseudogene	KNOWN	AC016734.2	1	1	-0.411119
chr2	63642455	63644038	63643246	ENSG00000229920.2	-	transcribed_processed_pseudogene	KNOWN	RPS4XP5	2	1	-0.271647
chr2	63684305	63684710	63684507	ENSG00000234488.1	+	processed_pseudogene	KNOWN	AC096664.1	1	1	-0.054850
chr2	63695393	63695535	63695464	ENSG00000221085.1	-	miRNA	NOVEL	AC096664.3	1	1	-0.318096
chr2	63717122	63717899	63717510	ENSG00000228872.2	+	processed_pseudogene	KNOWN	AC096664.2	1	1	0.058633
chr2	63751697	63752630	63752163	ENSG00000229221.1	-	processed_pseudogene	KNOWN	HNRNPA1P66	1	1	-0.090212
chr2	63840940	63891562	63866251	ENSG00000169764.14	+	protein_coding	KNOWN	UGP2	31	11	0.118790
chr2	63883249	63883391	63883320	ENSG00000251775.1	-	snoRNA	NOVEL	ACA59	1	1	0.377149
chr2	63892146	64019072	63955609	ENSG00000143952.19	-	protein_coding	KNOWN	VPS54	4	23	-0.145434
chr2	64086353	64088246	64087299	ENSG00000228079.2	-	lincRNA	KNOWN	AC012368.1	1	2	0.248582
chr2	64092652	64144454	64118553	ENSG00000197329.11	-	protein_coding	KNOWN	PELI1	4	7	-0.270264
chr2	64143239	64252859	64198049	ENSG00000225889.7	+	antisense	KNOWN	AC074289.1	6	6	-0.197635
chr2	64185078	64205485	64195281	ENSG00000230923.1	-	lincRNA	KNOWN	LINC00309	1	6	-0.264956
chr2	64208498	64208716	64208607	ENSG00000270354.1	-	processed_pseudogene	KNOWN	RP11-547M24.1	1	1	-0.214488
chr2	64252900	64252967	64252933	ENSG00000277960.1	-	miRNA	NOVEL	AC074289.2	1	1	-0.093959
chr2	64330486	64332131	64331308	ENSG00000238012.1	-	lincRNA	KNOWN	AC114752.1	1	2	0.269530
chr2	64338067	64341647	64339857	ENSG00000238201.1	-	lincRNA	KNOWN	AC114752.3	1	2	0.269530
chr2	64340747	64340848	64340797	ENSG00000264297.2	-	miRNA	KNOWN	MIR4433B	1	1	0.269530
chr2	64347193	64347741	64347467	ENSG00000236148.5	-	processed_pseudogene	KNOWN	RPL23AP37	1	1	0.269530
chr2	64395220	64453798	64424509	ENSG00000223935.1	-	antisense	KNOWN	AC008074.3	1	4	-0.026144
chr2	64450096	64450524	64450310	ENSG00000237217.1	+	processed_pseudogene	KNOWN	AC008074.5	1	1	-0.368320
chr2	64453969	64461381	64457675	ENSG00000119862.12	+	protein_coding	KNOWN	LGALSL	5	5	-0.368320
chr2	64486353	64500904	64493628	ENSG00000223863.1	+	lincRNA	KNOWN	AC008074.4	1	3	0.038543
chr2	64522187	64524093	64523140	ENSG00000260101.1	-	lincRNA	KNOWN	RP11-568N6.1	1	1	0.033777
chr2	64524305	64593005	64558655	ENSG00000119844.15	+	protein_coding	KNOWN	AFTPH	7	10	-0.227861
chr2	64552771	64592133	64572452	ENSG00000279644.1	-	protein_coding	KNOWN	AC008074.1	1	9	-0.204650
chr2	64578892	64578997	64578944	ENSG00000252414.1	+	snRNA	KNOWN	RNU6-100P	1	1	-0.211915
chr2	64606975	64616482	64611728	ENSG00000233694.5	+	lincRNA	KNOWN	AC007365.1	2	4	0.324588
chr2	64631621	64751005	64691313	ENSG00000179833.4	-	protein_coding	KNOWN	SERTAD2	3	2	0.082743
chr2	64644612	64646698	64645655	ENSG00000226756.1	+	lincRNA	KNOWN	AC007365.3	1	2	0.265640
chr2	64665607	64666064	64665835	ENSG00000227791.3	+	processed_pseudogene	KNOWN	AC007365.4	1	1	0.134552
chr2	64776104	64776187	64776145	ENSG00000253082.1	+	miRNA	NOVEL	AC007365.2	1	1	0.108866
chr2	64817378	64817675	64817526	ENSG00000275588.1	+	misc_RNA	KNOWN	RN7SL341P	1	1	-0.104700
chr2	64817586	64817668	64817627	ENSG00000280945.1	+	miRNA	NOVEL	AC007880.2	1	1	-0.104700
chr2	64834056	64834157	64834106	ENSG00000199964.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.475907
chr2	64846130	64863626	64854878	ENSG00000234572.1	-	lincRNA	KNOWN	AC007880.1	1	5	0.437547
chr2	64901840	64905137	64903488	ENSG00000237638.1	-	lincRNA	KNOWN	AC007386.2	1	2	-0.000202
chr2	64906863	64907138	64907000	ENSG00000244534.3	-	misc_RNA	KNOWN	RN7SL211P	1	1	-0.000202
chr2	64960053	64960634	64960343	ENSG00000227394.1	-	processed_pseudogene	KNOWN	AC007386.3	1	1	0.192103
chr2	64988477	65023865	65006171	ENSG00000115902.10	+	protein_coding	KNOWN	SLC1A4	5	8	0.089563
chr2	64994746	64994860	64994803	ENSG00000252892.1	+	snRNA	KNOWN	RNU6-548P	1	1	-0.156396
chr2	65030727	65053017	65041872	ENSG00000232613.6	+	antisense	KNOWN	AC007386.4	2	3	0.053980
chr2	65056366	65087004	65071685	ENSG00000011523.13	+	protein_coding	KNOWN	CEP68	5	7	0.337467
chr2	65070701	65130106	65100403	ENSG00000138069.16	-	protein_coding	KNOWN	RAB1A	5	6	0.286487
chr2	65158662	65158860	65158761	ENSG00000272025.1	+	snoRNA	NOVEL	SNORA74	1	1	-0.069371
chr2	65203571	65203813	65203692	ENSG00000273763.1	-	processed_pseudogene	KNOWN	RP11-420C9.1	1	1	0.171426
chr2	65205108	65205988	65205548	ENSG00000172974.11	+	processed_pseudogene	KNOWN	AC007318.5	1	1	0.171426
chr2	65227753	65271253	65249503	ENSG00000138071.13	+	protein_coding	KNOWN	ACTR2	5	10	0.154999
chr2	65310851	65432637	65371744	ENSG00000198369.9	-	protein_coding	KNOWN	SPRED2	8	6	0.146135
chr2	65373700	65380685	65377192	ENSG00000232693.2	-	sense_intronic	KNOWN	AC012370.2	1	4	0.155417
chr2	65436711	66084639	65760675	ENSG00000204929.11	+	lincRNA	KNOWN	AC074391.1	7	10	-0.196278
chr2	65439888	65456571	65448229	ENSG00000234255.8	-	lincRNA	KNOWN	AC012370.3	9	4	0.267502
chr2	65500993	65502138	65501565	ENSG00000237979.1	-	processed_pseudogene	KNOWN	AC007389.1	1	2	0.174028
chr2	65511771	65512076	65511923	ENSG00000223739.1	-	processed_pseudogene	KNOWN	AC007389.2	1	1	0.200926
chr2	65545401	65545696	65545548	ENSG00000243029.3	-	misc_RNA	KNOWN	RN7SL635P	1	1	-0.246424
chr2	65555432	65555534	65555483	ENSG00000251900.1	-	misc_RNA	KNOWN	VTRNA2-2P	1	1	0.500208
chr2	65589566	65640177	65614871	ENSG00000235725.1	-	lincRNA	KNOWN	AC007389.3	1	4	-0.240969
chr2	65623272	65628424	65625848	ENSG00000281920.1	+	lincRNA	KNOWN	RP11-418H16.1	1	3	-0.168160
chr2	65666695	65667737	65667216	ENSG00000214533.3	+	processed_pseudogene	KNOWN	KRT18P33	1	1	-0.060960
chr2	65667256	65667346	65667301	ENSG00000265899.1	+	miRNA	NOVEL	AC007389.4	1	1	-0.060960
chr2	65731676	65733041	65732358	ENSG00000272177.1	+	lincRNA	KNOWN	RP11-340F16.1	1	2	-0.241135
chr2	65790039	65793533	65791786	ENSG00000280257.1	+	TEC	KNOWN	RP11-340F16.2	1	1	-0.191462
chr2	66041250	66041390	66041320	ENSG00000221524.1	+	miRNA	NOVEL	AC074391.2	1	1	-0.478324
chr2	66235377	66236213	66235795	ENSG00000227293.1	-	lincRNA	KNOWN	AC118345.1	1	2	-0.434376
chr2	66327349	66328984	66328166	ENSG00000225815.2	+	lincRNA	KNOWN	AC092669.6	2	3	-0.473288
chr2	66358249	66358328	66358288	ENSG00000264525.1	-	miRNA	KNOWN	MIR4778	1	1	-0.216130
chr2	66383306	66392450	66387878	ENSG00000232164.1	+	lincRNA	KNOWN	AC092669.3	1	3	-0.396984
chr2	66426735	66433470	66430102	ENSG00000226819.1	-	antisense	KNOWN	MEIS1-AS3	1	4	-0.091534
chr2	66433452	66573869	66503660	ENSG00000143995.19	+	protein_coding	KNOWN	MEIS1	17	13	0.043957
chr2	66439088	66441836	66440462	ENSG00000230749.4	-	antisense	KNOWN	MEIS1-AS2	2	2	0.108202
chr2	66574030	66730157	66652093	ENSG00000232046.6	+	lincRNA	KNOWN	AC007392.3	5	6	-0.172584
chr2	66697125	66703227	66700176	ENSG00000237179.5	-	lincRNA	KNOWN	AC007392.4	3	3	-0.391885
chr2	66820684	66822570	66821627	ENSG00000224071.1	-	processed_pseudogene	KNOWN	AC009474.1	1	2	-0.460549
chr2	66881087	66881222	66881154	ENSG00000230355.1	-	processed_pseudogene	KNOWN	AC009474.2	1	1	-0.289643
chr2	66904436	66971462	66937949	ENSG00000230525.5	+	lincRNA	KNOWN	AC007403.2	2	5	-0.329576
chr2	66921510	66922457	66921983	ENSG00000232688.1	-	lincRNA	KNOWN	AC007403.1	1	3	-0.463527
chr2	67040546	67041966	67041256	ENSG00000223859.1	+	lincRNA	KNOWN	AC007403.3	1	2	-0.326510
chr2	67086446	67311439	67198942	ENSG00000235885.7	+	lincRNA	KNOWN	AC023115.2	13	9	-0.285622
chr2	67123357	67215319	67169338	ENSG00000236780.5	-	lincRNA	KNOWN	AC078941.1	3	8	-0.384346
chr2	67324627	67325304	67324965	ENSG00000236605.1	+	lincRNA	KNOWN	AC023115.4	1	2	-0.445665
chr2	67397319	67410545	67403932	ENSG00000143971.7	+	protein_coding	KNOWN	ETAA1	2	6	-0.100146
chr2	67562067	67574044	67568055	ENSG00000224173.1	+	lincRNA	KNOWN	AC007422.1	1	6	-0.163126
chr2	67565604	67684077	67624840	ENSG00000235495.1	-	lincRNA	KNOWN	AC010987.5	1	2	-0.220255
chr2	67796054	67825562	67810808	ENSG00000237013.1	-	lincRNA	KNOWN	AC010987.6	1	3	-0.237366
chr2	68023694	68024766	68024230	ENSG00000235968.1	-	processed_pseudogene	KNOWN	AC079112.1	1	2	-0.142473
chr2	68041130	68110948	68076039	ENSG00000197223.11	-	protein_coding	KNOWN	C1D	7	6	-0.177880
chr2	68122936	68157560	68140248	ENSG00000243667.6	-	protein_coding	KNOWN	WDR92	6	10	0.122834
chr2	68125265	68125747	68125506	ENSG00000236259.1	+	processed_pseudogene	KNOWN	AC017083.2	1	1	0.049928
chr2	68131238	68261230	68196234	ENSG00000273398.6	-	protein_coding	KNOWN	RP11-474G23.1	1	15	-0.128749
chr2	68157844	68176238	68167041	ENSG00000115946.7	+	protein_coding	KNOWN	PNO1	3	7	-0.096831
chr2	68178857	68256237	68217547	ENSG00000221823.10	-	protein_coding	KNOWN	PPP3R1	3	6	-0.235977
chr2	68179833	68180532	68180182	ENSG00000273275.1	+	antisense	KNOWN	RP11-474G23.2	1	1	-0.146168
chr2	68252870	68253848	68253359	ENSG00000273064.1	+	antisense	KNOWN	RP11-474G23.3	1	1	0.016540
chr2	68273104	68273206	68273155	ENSG00000221443.1	+	miRNA	NOVEL	AC017083.1	1	1	-0.241252
chr2	68284171	68320051	68302111	ENSG00000119865.8	-	protein_coding	KNOWN	CNRIP1	4	4	-0.089981
chr2	68361214	68365584	68363399	ENSG00000203395.2	-	antisense	KNOWN	AC015969.3	1	2	0.118627
chr2	68365173	68397453	68381313	ENSG00000115956.9	+	protein_coding	KNOWN	PLEK	2	9	-0.112917
chr2	68445710	68449174	68447442	ENSG00000229462.1	-	unprocessed_pseudogene	KNOWN	AC127383.1	1	3	-0.194312
chr2	68459419	68467258	68463338	ENSG00000204923.3	-	protein_coding	KNOWN	FBXO48	1	4	-0.198458
chr2	68467561	68655862	68561711	ENSG00000169621.9	+	protein_coding	KNOWN	APLF	7	11	-0.387532
chr2	68528241	68529452	68528846	ENSG00000214525.4	-	processed_pseudogene	KNOWN	AC130709.1	1	1	-0.470741
chr2	68643589	68658247	68650918	ENSG00000169618.6	+	protein_coding	KNOWN	PROKR1	1	3	-0.190952
chr2	68679601	68826833	68753217	ENSG00000163219.11	+	protein_coding	KNOWN	ARHGAP25	17	11	-0.098462
chr2	68832044	68837724	68834884	ENSG00000237576.1	+	antisense	KNOWN	AC097495.2	2	2	0.077041
chr2	68832816	68837192	68835004	ENSG00000228329.1	-	lincRNA	KNOWN	AC097495.3	1	2	0.077041
chr2	68865481	68871517	68868499	ENSG00000163217.1	-	protein_coding	KNOWN	BMP10	1	2	0.051128
chr2	68945232	68952970	68949101	ENSG00000183607.9	-	protein_coding	KNOWN	GKN2	2	6	-0.014674
chr2	68974573	68980974	68977773	ENSG00000169605.5	+	protein_coding	KNOWN	GKN1	2	6	-0.042101
chr2	69013178	69249327	69131252	ENSG00000169604.19	+	protein_coding	KNOWN	ANTXR1	7	18	0.157075
chr2	69103682	69103755	69103718	ENSG00000266649.1	+	miRNA	KNOWN	MIR3126	1	1	0.121587
chr2	69181897	69182003	69181950	ENSG00000251850.1	-	rRNA	KNOWN	RNA5SP96	1	1	0.113687
chr2	69182877	69182983	69182930	ENSG00000199460.2	+	snRNA	KNOWN	RNU6-1216P	1	1	0.113687
chr2	69251818	69252364	69252091	ENSG00000271597.1	-	processed_pseudogene	KNOWN	RP11-85D18.1	1	1	0.148894
chr2	69319769	69387254	69353511	ENSG00000198380.12	-	protein_coding	KNOWN	GFPT1	4	20	0.146881
chr2	69334600	69334692	69334646	ENSG00000252250.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.082531
chr2	69395750	69437628	69416689	ENSG00000169599.12	-	protein_coding	KNOWN	NFU1	10	8	0.250080
chr2	69457997	69674349	69566173	ENSG00000115977.18	-	protein_coding	KNOWN	AAK1	13	22	0.224072
chr2	69516751	69517046	69516898	ENSG00000244236.3	+	misc_RNA	KNOWN	RN7SL604P	1	1	0.322162
chr2	69520040	69520115	69520077	ENSG00000281301.1	-	miRNA	NOVEL	AC079121.1	1	1	0.322162
chr2	69520043	69520174	69520108	ENSG00000207016.1	-	snoRNA	KNOWN	SNORA36C	1	1	0.322162
chr2	69594741	69595058	69594899	ENSG00000232228.1	-	processed_pseudogene	KNOWN	RP11-77O7.1	1	1	0.216082
chr2	69597353	69598951	69598152	ENSG00000229948.2	+	processed_pseudogene	KNOWN	B3GALNT1P1	1	3	0.216082
chr2	69644425	69827100	69735762	ENSG00000196975.15	+	protein_coding	KNOWN	ANXA4	12	13	0.099010
chr2	69700192	69713847	69707019	ENSG00000231024.1	-	lincRNA	KNOWN	AC092431.3	1	2	0.095758
chr2	69829642	69881396	69855519	ENSG00000087338.4	+	protein_coding	KNOWN	GMCL1	4	14	0.002464
chr2	69844509	69844933	69844721	ENSG00000275381.1	-	processed_pseudogene	KNOWN	RP11-401N16.2	1	1	0.126757
chr2	69873565	69873819	69873692	ENSG00000270723.1	-	processed_pseudogene	KNOWN	RPL23AP92	1	1	0.091992
chr2	69893560	69905575	69899567	ENSG00000124380.10	+	protein_coding	KNOWN	SNRNP27	5	7	0.070512
chr2	69897688	69942945	69920316	ENSG00000059728.10	+	protein_coding	KNOWN	MXD1	6	8	0.153413
chr2	69902350	69902709	69902529	ENSG00000279229.1	-	protein_coding	KNOWN	AC019206.1	1	2	0.070512
chr2	69960089	69962265	69961177	ENSG00000244617.2	-	protein_coding	KNOWN	ASPRV1	1	1	0.455499
chr2	69962263	70103220	70032741	ENSG00000179818.13	-	processed_transcript	KNOWN	PCBP1-AS1	170	11	0.373123
chr2	70075014	70075272	70075143	ENSG00000263669.2	-	misc_RNA	KNOWN	RN7SL470P	1	1	0.430408
chr2	70087454	70089203	70088328	ENSG00000169564.6	+	protein_coding	KNOWN	PCBP1	1	1	0.430408
chr2	70089721	70096100	70092910	ENSG00000233060.1	+	lincRNA	KNOWN	AC016700.2	1	3	0.430950
chr2	70102551	70102862	70102706	ENSG00000225392.1	+	processed_pseudogene	KNOWN	AC016700.4	1	1	0.430975
chr2	70124036	70125317	70124676	ENSG00000231327.1	-	lincRNA	KNOWN	AC016700.5	1	2	0.269185
chr2	70149880	70248615	70199247	ENSG00000115998.7	-	protein_coding	KNOWN	C2orf42	14	10	0.224670
chr2	70209444	70248660	70229052	ENSG00000116001.15	-	protein_coding	KNOWN	TIA1	20	13	0.145957
chr2	70252918	70253005	70252961	ENSG00000221238.1	-	miRNA	KNOWN	MIR1285-2	1	1	0.165158
chr2	70253855	70254010	70253932	ENSG00000231414.1	-	processed_pseudogene	KNOWN	AC016700.6	1	1	0.165158
chr2	70257386	70281191	70269288	ENSG00000116005.11	+	protein_coding	KNOWN	PCYOX1	6	6	0.142354
chr2	70281362	70293771	70287566	ENSG00000143977.13	-	protein_coding	KNOWN	SNRPG	9	5	0.158064
chr2	70295975	70302090	70299032	ENSG00000035141.7	-	protein_coding	KNOWN	FAM136A	6	4	0.252883
chr2	70301451	70302072	70301761	ENSG00000233849.1	+	antisense	KNOWN	AC022201.5	1	2	0.252883
chr2	70353010	70355915	70354462	ENSG00000235289.1	+	processed_pseudogene	KNOWN	BRD7P6	1	2	0.223987
chr2	70402934	70422678	70412806	ENSG00000229229.1	+	antisense	KNOWN	AC022201.4	1	4	-0.001024
chr2	70447280	70554193	70500736	ENSG00000163235.15	-	protein_coding	KNOWN	TGFA	9	7	0.025586
chr2	70455530	70455624	70455577	ENSG00000215996.2	-	miRNA	NOVEL	AC017084.1	1	1	0.001321
chr2	70467385	70468495	70467940	ENSG00000224606.1	-	sense_intronic	KNOWN	TGFA-IT1	1	2	0.001321
chr2	70607618	70768225	70687921	ENSG00000075340.22	-	protein_coding	KNOWN	ADD2	14	21	-0.117523
chr2	70687142	70691824	70689483	ENSG00000235035.1	+	antisense	KNOWN	AC007395.3	1	2	-0.019192
chr2	70777310	70790643	70783976	ENSG00000183733.6	-	protein_coding	KNOWN	FIGLA	1	5	-0.030749
chr2	70803157	70803426	70803291	ENSG00000228034.1	+	processed_pseudogene	KNOWN	HMGN2P21	1	1	-0.021071
chr2	70808643	70820600	70814621	ENSG00000152672.7	-	protein_coding	KNOWN	CLEC4F	2	7	-0.100268
chr2	70810798	70811474	70811136	ENSG00000231386.1	-	processed_pseudogene	KNOWN	AC007395.4	1	1	-0.110398
chr2	70830214	70835822	70833018	ENSG00000116031.8	-	protein_coding	KNOWN	CD207	1	6	-0.025845
chr2	70887871	70889959	70888915	ENSG00000237751.2	+	lincRNA	KNOWN	LINC01143	1	4	0.151188
chr2	70900155	70900351	70900253	ENSG00000277764.1	+	misc_RNA	NOVEL	Vax2os1_3	1	1	0.251190
chr2	70900590	70933446	70917018	ENSG00000116035.2	+	protein_coding	KNOWN	VAX2	1	3	0.241795
chr2	70935882	70965406	70950644	ENSG00000116039.11	+	protein_coding	KNOWN	ATP6V1B1	8	14	0.370613
chr2	70939318	70995336	70967327	ENSG00000258881.6	-	protein_coding	KNOWN	AC007040.11	2	6	0.344133
chr2	70941817	70948610	70945213	ENSG00000239322.1	-	antisense	KNOWN	ATP6V1B1-AS1	2	3	0.381498
chr2	70955899	70956234	70956066	ENSG00000226186.1	-	processed_pseudogene	KNOWN	TCEB1P21	1	1	0.360640
chr2	70965584	70965867	70965725	ENSG00000241159.3	+	misc_RNA	KNOWN	RN7SL160P	1	1	0.360640
chr2	70978380	70985499	70981939	ENSG00000144031.11	+	protein_coding	KNOWN	ANKRD53	7	7	0.225017
chr2	70985938	70994945	70990441	ENSG00000144043.11	-	protein_coding	KNOWN	TEX261	6	6	0.460513
chr2	70994510	71002754	70998632	ENSG00000228384.4	+	antisense	KNOWN	AC007040.6	1	2	0.653871
chr2	71002531	71064743	71033637	ENSG00000236469.1	-	antisense	KNOWN	AC007040.8	1	4	0.122668
chr2	71012331	71012407	71012369	ENSG00000266029.1	+	miRNA	NOVEL	AC007040.2	1	1	0.051578
chr2	71013089	71013157	71013123	ENSG00000266186.1	-	miRNA	NOVEL	AC007040.3	1	1	0.051578
chr2	71017024	71017109	71017066	ENSG00000265812.1	+	miRNA	NOVEL	AC007040.1	1	1	0.051578
chr2	71029028	71029893	71029460	ENSG00000205847.5	+	unprocessed_pseudogene	KNOWN	OR7E91P	1	1	0.051578
chr2	71037685	71038703	71038194	ENSG00000234485.5	+	unprocessed_pseudogene	KNOWN	OR7E46P	1	1	-0.017237
chr2	71039307	71039360	71039333	ENSG00000264382.1	+	miRNA	NOVEL	AC007881.1	1	1	-0.017237
chr2	71055527	71056003	71055765	ENSG00000234896.1	+	unprocessed_pseudogene	KNOWN	OR7E62P	1	1	0.139820
chr2	71064344	71079805	71072074	ENSG00000124357.12	+	protein_coding	KNOWN	NAGK	29	10	0.306481
chr2	71067519	71068125	71067822	ENSG00000272735.1	-	lincRNA	KNOWN	RP11-467P9.1	1	1	0.139820
chr2	71109684	71130239	71119961	ENSG00000124370.10	-	protein_coding	KNOWN	MCEE	5	5	-0.042666
chr2	71130314	71150101	71140207	ENSG00000124383.8	+	protein_coding	KNOWN	MPHOSPH10	5	11	0.028467
chr2	71178587	71178773	71178680	ENSG00000233870.1	+	unprocessed_pseudogene	KNOWN	AC007881.4	1	1	0.279807
chr2	71182739	71227083	71204911	ENSG00000124374.8	-	protein_coding	KNOWN	PAIP2B	1	4	-0.009709
chr2	71276561	71435069	71355815	ENSG00000075292.18	+	protein_coding	KNOWN	ZNF638	27	28	-0.056875
chr2	71373938	71376320	71375129	ENSG00000281195.1	+	processed_transcript	KNOWN	ZNF638-IT1	1	2	-0.185789
chr2	71379755	71379858	71379806	ENSG00000200779.1	-	snRNA	KNOWN	RNU6-105P	1	1	-0.185789
chr2	71453722	71686768	71570245	ENSG00000135636.13	+	protein_coding	KNOWN	DYSF	19	56	0.395822
chr2	71984182	71984434	71984308	ENSG00000233971.1	-	processed_pseudogene	KNOWN	RPS20P10	1	1	-0.077933
chr2	72129238	72148038	72138638	ENSG00000003137.8	-	protein_coding	KNOWN	CYP26B1	5	6	0.140698
chr2	72170559	72170645	72170602	ENSG00000276288.1	+	miRNA	NOVEL	AC006461.1	1	1	0.116104
chr2	72175984	72826041	72501012	ENSG00000144036.15	-	protein_coding	KNOWN	EXOC6B	9	23	-0.169872
chr2	72288785	72289110	72288947	ENSG00000228568.1	+	processed_pseudogene	KNOWN	AC006461.2	1	1	-0.033539
chr2	72721806	72722003	72721904	ENSG00000222536.1	+	snRNA	KNOWN	RNU2-39P	1	1	-0.154364
chr2	72760534	72760602	72760568	ENSG00000212378.1	+	snoRNA	NOVEL	SNORD78	1	1	-0.234990
chr2	72887360	72892158	72889759	ENSG00000116096.5	+	protein_coding	KNOWN	SPR	2	3	0.302601
chr2	72916260	72936071	72926165	ENSG00000135638.13	+	protein_coding	KNOWN	EMX1	6	3	0.473362
chr2	72932974	72934355	72933664	ENSG00000278060.1	-	antisense	KNOWN	RP11-466M21.1	1	2	0.674204
chr2	72942036	73075619	73008827	ENSG00000144040.12	-	protein_coding	KNOWN	SFXN5	22	14	0.487561
chr2	73073382	73156721	73115051	ENSG00000135631.15	-	protein_coding	KNOWN	RAB11FIP5	6	5	0.507365
chr2	73113018	73115907	73114462	ENSG00000272702.1	+	processed_transcript	KNOWN	RP11-44N22.3	2	2	0.707012
chr2	73202258	73212513	73207385	ENSG00000214513.3	+	protein_coding	KNOWN	NOTO	1	3	0.392256
chr2	73214222	73227237	73220729	ENSG00000135632.11	+	protein_coding	KNOWN	SMYD5	9	13	0.397618
chr2	73228006	73233238	73230622	ENSG00000135617.3	-	protein_coding	KNOWN	PRADC1	3	5	0.405167
chr2	73233420	73253021	73243220	ENSG00000135624.15	+	protein_coding	KNOWN	CCT7	17	13	0.351958
chr2	73254682	73284431	73269556	ENSG00000163013.11	-	protein_coding	KNOWN	FBXO41	5	13	0.166301
chr2	73290929	73293705	73292317	ENSG00000135625.7	-	protein_coding	KNOWN	EGR4	2	2	0.321474
chr2	73298683	73298787	73298735	ENSG00000252988.1	+	snRNA	KNOWN	RNU6-111P	1	1	0.321474
chr2	73370019	73370892	73370455	ENSG00000214484.3	+	processed_pseudogene	KNOWN	RPSAP28	1	1	-0.031391
chr2	73385758	73610793	73498275	ENSG00000116127.17	+	protein_coding	KNOWN	ALMS1	8	23	-0.252801
chr2	73456764	73459484	73458124	ENSG00000230002.2	+	sense_intronic	KNOWN	ALMS1-IT1	1	2	-0.042938
chr2	73488579	73488660	73488619	ENSG00000221087.1	-	miRNA	NOVEL	AC096546.1	1	1	-0.463398
chr2	73640832	73642393	73641612	ENSG00000144035.3	-	protein_coding	KNOWN	NAT8	1	2	-0.274280
chr2	73644919	73685576	73665247	ENSG00000163016.9	+	transcribed_unprocessed_pseudogene	KNOWN	ALMS1P	2	7	-0.293680
chr2	73700576	73701340	73700958	ENSG00000204872.4	-	polymorphic_pseudogene	KNOWN	NAT8B	1	1	0.039524
chr2	73729104	73737400	73733252	ENSG00000144034.14	-	protein_coding	KNOWN	TPRKB	10	6	0.302240
chr2	73750256	73750786	73750521	ENSG00000273245.1	-	lincRNA	KNOWN	RP11-434P11.2	1	1	0.147335
chr2	73761269	73761781	73761525	ENSG00000280037.1	-	TEC	KNOWN	RP11-434P11.1	1	1	0.147335
chr2	73762184	73780157	73771170	ENSG00000144048.10	-	protein_coding	KNOWN	DUSP11	5	9	0.233751
chr2	73784189	73817147	73800668	ENSG00000187833.7	+	protein_coding	KNOWN	C2orf78	1	3	0.151500
chr2	73828916	73873659	73851287	ENSG00000124356.15	+	protein_coding	KNOWN	STAMBP	11	11	0.285742
chr2	73877566	73878862	73878214	ENSG00000271536.1	+	processed_pseudogene	KNOWN	RP11-51I5.1	1	2	-0.091454
chr2	73892314	73919865	73906089	ENSG00000163017.13	+	protein_coding	KNOWN	ACTG2	9	10	0.252476
chr2	73916583	73916666	73916624	ENSG00000281314.1	+	miRNA	NOVEL	AC073046.1	1	1	0.253273
chr2	73926826	73958961	73942893	ENSG00000114956.19	+	protein_coding	KNOWN	DGUOK	8	7	0.360389
chr2	73947642	73981441	73964541	ENSG00000237883.1	-	antisense	KNOWN	DGUOK-AS1	3	2	0.218452
chr2	73968123	73968206	73968164	ENSG00000201876.1	-	rRNA	KNOWN	RNA5SP97	1	1	0.114476
chr2	73985132	73986343	73985737	ENSG00000235499.1	+	lincRNA	KNOWN	AC073046.25	1	2	0.344758
chr2	73986404	74108176	74047290	ENSG00000187605.15	+	protein_coding	KNOWN	TET3	4	11	0.434750
chr2	73998337	73998548	73998442	ENSG00000279181.1	-	TEC	KNOWN	RP11-711M9.2	1	1	0.511291
chr2	74120680	74123218	74121949	ENSG00000257800.1	+	processed_pseudogene	KNOWN	FNBP1P1	1	2	0.238310
chr2	74130583	74135395	74132989	ENSG00000217702.2	+	lincRNA	KNOWN	RP11-287D1.4	2	2	0.489327
chr2	74135398	74147994	74141696	ENSG00000163170.11	-	protein_coding	KNOWN	BOLA3	5	4	0.489327
chr2	74148009	74150061	74149035	ENSG00000225439.2	+	antisense	KNOWN	BOLA3-AS1	3	3	0.493370
chr2	74152528	74178898	74165713	ENSG00000114978.17	-	protein_coding	KNOWN	MOB1A	6	6	0.543923
chr2	74191388	74192245	74191816	ENSG00000279201.1	+	TEC	KNOWN	RP11-287D1.5	2	1	0.511617
chr2	74196698	74198560	74197629	ENSG00000279070.2	-	lincRNA	KNOWN	RP11-287D1.2	1	1	0.511617
chr2	74198562	74217565	74208063	ENSG00000065911.11	+	protein_coding	KNOWN	MTHFD2	8	8	0.475849
chr2	74211604	74363377	74287490	ENSG00000264324.1	-	protein_coding	KNOWN	RP11-287D1.3	1	39	0.541253
chr2	74216242	74343414	74279828	ENSG00000188687.15	-	protein_coding	KNOWN	SLC4A5	13	31	0.553602
chr2	74306728	74308008	74307368	ENSG00000229798.1	-	processed_pseudogene	KNOWN	KRT18P26	1	1	0.604198
chr2	74319399	74319501	74319450	ENSG00000252214.1	+	snRNA	KNOWN	RNU6-542P	1	1	0.409076
chr2	74350069	74351009	74350539	ENSG00000234632.1	+	processed_pseudogene	KNOWN	NECAP1P2	1	2	0.553482
chr2	74351134	74351419	74351276	ENSG00000225658.1	+	processed_pseudogene	KNOWN	TAF13P2	1	1	0.553482
chr2	74361154	74392087	74376620	ENSG00000204843.12	-	protein_coding	KNOWN	DCTN1	27	32	0.790352
chr2	74385486	74393882	74389684	ENSG00000237737.5	+	antisense	KNOWN	DCTN1-AS1	6	4	0.780245
chr2	74413020	74413481	74413250	ENSG00000234521.1	-	processed_pseudogene	KNOWN	AC005041.11	1	2	0.662988
chr2	74414176	74421591	74417883	ENSG00000159239.11	-	protein_coding	KNOWN	C2orf81	6	4	0.662988
chr2	74418122	74418442	74418282	ENSG00000233155.1	-	processed_pseudogene	KNOWN	HMGA1P8	1	1	0.662988
chr2	74421678	74425755	74423716	ENSG00000005448.16	+	protein_coding	KNOWN	WDR54	13	10	0.662988
chr2	74425836	74442422	74434129	ENSG00000114993.15	-	protein_coding	KNOWN	RTKN	10	13	0.882790
chr2	74455023	74457960	74456491	ENSG00000115274.14	+	protein_coding	KNOWN	INO80B	9	5	0.860484
chr2	74455088	74460884	74457986	ENSG00000274049.4	+	protein_coding	KNOWN	INO80B-WBP1	2	8	0.860484
chr2	74458329	74460891	74459610	ENSG00000239779.6	+	protein_coding	KNOWN	WBP1	14	5	0.860484
chr2	74461057	74465410	74463233	ENSG00000115275.11	-	protein_coding	KNOWN	MOGS	9	5	0.860484
chr2	74471958	74473322	74472640	ENSG00000204822.6	-	protein_coding	KNOWN	MRPL53	4	3	0.951984
chr2	74471986	74483408	74477697	ENSG00000135637.13	-	protein_coding	KNOWN	CCDC142	9	11	0.951984
chr2	74483073	74494886	74488979	ENSG00000115282.19	+	protein_coding	KNOWN	TTC31	13	13	1.013212
chr2	74497517	74503316	74500416	ENSG00000179528.15	-	protein_coding	KNOWN	LBX2	6	3	1.099985
chr2	74501717	74502365	74502041	ENSG00000272183.1	+	antisense	KNOWN	RP11-523H20.3	1	1	1.099985
chr2	74502595	74504678	74503636	ENSG00000257702.3	+	antisense	KNOWN	LBX2-AS1	2	2	1.099985
chr2	74505043	74508580	74506811	ENSG00000115289.12	-	protein_coding	KNOWN	PCGF1	8	9	1.099985
chr2	74513463	74517147	74515305	ENSG00000115297.10	+	protein_coding	KNOWN	TLX2	4	4	1.121915
chr2	74518131	74526336	74522233	ENSG00000144045.13	-	protein_coding	KNOWN	DQX1	8	12	1.121915
chr2	74526645	74529939	74528292	ENSG00000115307.16	-	protein_coding	KNOWN	AUP1	8	12	1.121915
chr2	74529377	74533348	74531362	ENSG00000115317.11	+	protein_coding	KNOWN	HTRA2	10	9	0.821270
chr2	74532414	74555690	74544052	ENSG00000115318.11	-	protein_coding	KNOWN	LOXL3	10	14	0.801518
chr2	74549026	74557554	74553290	ENSG00000115325.13	+	protein_coding	KNOWN	DOK1	13	5	0.896183
chr2	74557883	74648338	74603110	ENSG00000159374.17	-	protein_coding	KNOWN	M1AP	9	11	0.496379
chr2	74618856	74620979	74619917	ENSG00000233872.1	-	processed_pseudogene	KNOWN	AC005033.6	1	2	0.084130
chr2	74628328	74628942	74628635	ENSG00000108442.2	-	processed_pseudogene	KNOWN	TVP23BP2	1	1	0.084130
chr2	74654228	74683853	74669040	ENSG00000135622.12	+	protein_coding	KNOWN	SEMA4F	10	14	0.378758
chr2	74754670	74754819	74754744	ENSG00000224646.2	-	processed_pseudogene	KNOWN	AC007387.2	1	1	0.526223
chr2	74832655	74833987	74833321	ENSG00000272711.1	-	lincRNA	KNOWN	RP11-259N19.1	1	1	0.318907
chr2	74833981	74893359	74863670	ENSG00000159399.9	+	protein_coding	KNOWN	HK2	3	18	0.640102
chr2	74918148	74938418	74928283	ENSG00000204792.2	+	lincRNA	KNOWN	LINC01291	3	4	0.263953
chr2	74919555	74924846	74922200	ENSG00000236209.1	-	lincRNA	KNOWN	AC104135.2	1	2	0.333000
chr2	74940258	74942670	74941464	ENSG00000230836.1	+	lincRNA	KNOWN	LINC01293	1	2	0.166760
chr2	74958492	74970128	74964310	ENSG00000115350.11	+	protein_coding	KNOWN	POLE4	6	5	0.109632
chr2	75046463	75199700	75123081	ENSG00000115353.10	-	protein_coding	KNOWN	TACR1	3	5	0.005568
chr2	75090812	75090914	75090863	ENSG00000263909.1	+	miRNA	KNOWN	MIR5000	1	1	-0.022872
chr2	75154366	75189949	75172157	ENSG00000270571.2	+	antisense	KNOWN	RP11-355F16.1	1	3	0.096580
chr2	75455994	75456578	75456286	ENSG00000236167.1	-	processed_pseudogene	KNOWN	GAPDHP57	1	1	0.008576
chr2	75469302	75569722	75519512	ENSG00000115363.13	-	protein_coding	KNOWN	EVA1A	11	5	0.261130
chr2	75474453	75482579	75478516	ENSG00000237293.1	+	antisense	KNOWN	AC007099.2	1	2	0.019235
chr2	75489576	75489710	75489643	ENSG00000238410.1	+	snoRNA	NOVEL	snoU109	1	1	0.019235
chr2	75524068	75542706	75533387	ENSG00000231172.2	+	antisense	KNOWN	AC007099.1	1	3	0.165806
chr2	75598071	75598559	75598315	ENSG00000230477.1	+	processed_pseudogene	KNOWN	AC005034.2	1	1	-0.000520
chr2	75627950	75628168	75628059	ENSG00000221638.2	+	snoRNA	NOVEL	U3	1	1	0.105864
chr2	75646783	75690851	75668817	ENSG00000115364.13	+	protein_coding	KNOWN	MRPL19	7	7	-0.030007
chr2	75651288	75651627	75651457	ENSG00000226247.1	-	processed_pseudogene	KNOWN	SUPT4H1P1	1	1	-0.169206
chr2	75652000	75710989	75681494	ENSG00000005436.13	-	protein_coding	KNOWN	GCFC2	11	17	-0.059666
chr2	75660462	75662208	75661335	ENSG00000270696.1	+	antisense	KNOWN	RP11-342K6.1	1	1	-0.169206
chr2	75669989	75670454	75670221	ENSG00000271452.1	+	sense_intronic	KNOWN	RP11-342K6.2	1	1	0.142849
chr2	75697583	75697996	75697789	ENSG00000270462.1	+	antisense	KNOWN	RP11-342K6.3	1	1	-0.169395
chr2	75719120	75720018	75719569	ENSG00000270996.1	+	lincRNA	KNOWN	RP11-342K6.4	1	1	-0.081157
chr2	76106016	76107324	76106670	ENSG00000233107.1	-	processed_pseudogene	KNOWN	SUCLA2P2	1	1	-0.496529
chr2	76258034	76258897	76258465	ENSG00000228209.1	-	processed_pseudogene	KNOWN	AC073091.2	1	1	-0.929277
chr2	76260755	76261661	76261208	ENSG00000271356.1	-	processed_pseudogene	KNOWN	RP11-335E8.1	1	1	-0.929277
chr2	76445079	76445410	76445244	ENSG00000200488.1	-	misc_RNA	KNOWN	RN7SKP203	1	1	-0.398755
chr2	76595413	76595678	76595545	ENSG00000251947.1	-	misc_RNA	KNOWN	RN7SKP164	1	1	-0.446677
chr2	76747719	77593319	77170519	ENSG00000176204.13	-	protein_coding	KNOWN	LRRTM4	7	4	-0.606129
chr2	76772909	76773045	76772977	ENSG00000200028.1	+	rRNA	KNOWN	RNA5SP98	1	1	-0.526138
chr2	76985965	77009791	76997878	ENSG00000234653.1	+	antisense	KNOWN	AC079117.1	1	4	-0.489370
chr2	77020336	77020421	77020378	ENSG00000211984.2	-	miRNA	NOVEL	AC079117.2	1	1	-0.473988
chr2	77041778	77041863	77041820	ENSG00000263447.1	-	miRNA	NOVEL	AC079117.3	1	1	-0.512467
chr2	77652413	77654668	77653540	ENSG00000227088.1	-	lincRNA	KNOWN	AC084149.2	1	2	-0.287422
chr2	77672215	77673792	77673003	ENSG00000230968.1	+	lincRNA	KNOWN	AC084149.1	1	2	-1.054850
chr2	77731871	77731956	77731913	ENSG00000221704.2	-	miRNA	NOVEL	AC105399.1	1	1	-0.517056
chr2	77788382	77793087	77790734	ENSG00000237077.1	+	transcribed_processed_pseudogene	KNOWN	AC105399.2	2	2	-0.796502
chr2	77915934	77918011	77916972	ENSG00000233605.2	+	lincRNA	KNOWN	AC073628.1	1	3	-0.926156
chr2	78088730	78127806	78108268	ENSG00000229494.1	+	lincRNA	KNOWN	AC012494.1	1	6	-0.643914
chr2	78412793	78413094	78412943	ENSG00000214429.3	-	processed_pseudogene	KNOWN	CYCSP6	1	1	-0.712992
chr2	78437850	78438921	78438385	ENSG00000270470.1	+	processed_pseudogene	KNOWN	RP11-601H16.1	1	1	-0.443605
chr2	78597911	78599406	78598658	ENSG00000234877.2	+	lincRNA	KNOWN	AC092660.1	1	2	-0.798597
chr2	78882447	78882552	78882499	ENSG00000202423.1	+	snRNA	KNOWN	RNU6-827P	1	1	-0.709228
chr2	78882628	78882734	78882681	ENSG00000200048.1	+	snRNA	KNOWN	RNU6-812P	1	1	-0.709228
chr2	79025686	79028505	79027095	ENSG00000143954.12	+	protein_coding	KNOWN	REG3G	5	6	-0.250114
chr2	79085030	79088019	79086524	ENSG00000172023.7	-	protein_coding	KNOWN	REG1B	5	6	-0.323046
chr2	79120362	79123419	79121890	ENSG00000115386.5	+	protein_coding	KNOWN	REG1A	4	6	-0.411119
chr2	79135503	79138427	79136965	ENSG00000204787.8	-	transcribed_unprocessed_pseudogene	KNOWN	REG1P	7	5	-0.364386
chr2	79157003	79159753	79158378	ENSG00000172016.15	-	protein_coding	KNOWN	REG3A	5	6	-0.342636
chr2	79158374	79185523	79171948	ENSG00000224879.1	+	sense_overlapping	KNOWN	AC011754.1	1	3	-0.447859
chr2	79185231	80648861	79917046	ENSG00000066032.18	+	protein_coding	KNOWN	CTNNA2	19	22	-0.382619
chr2	79493716	79500844	79497280	ENSG00000229385.1	-	antisense	KNOWN	AC010975.1	1	5	-0.453004
chr2	79547151	79548128	79547639	ENSG00000277171.1	-	unprocessed_pseudogene	KNOWN	RP11-191H23.1	1	1	-0.931092
chr2	79573764	79575593	79574678	ENSG00000230237.1	-	processed_pseudogene	KNOWN	AC010975.2	1	2	-0.653435
chr2	79636862	79636963	79636912	ENSG00000252031.1	-	snRNA	KNOWN	RNU6-561P	1	1	-0.429545
chr2	79649294	79649359	79649326	ENSG00000266436.1	-	miRNA	KNOWN	MIR4264	1	1	-0.429545
chr2	79794270	79794381	79794325	ENSG00000263566.1	+	miRNA	NOVEL	AC096753.1	1	1	-0.254184
chr2	79866495	79866583	79866539	ENSG00000276917.1	-	miRNA	KNOWN	MIR8080	1	1	-0.431570
chr2	80028012	80030551	80029281	ENSG00000224731.1	-	antisense	KNOWN	AC016716.2	1	3	0.038063
chr2	80162428	80163135	80162781	ENSG00000223427.1	-	processed_pseudogene	KNOWN	AC016716.1	1	1	-0.250533
chr2	80244623	80244718	80244670	ENSG00000221179.1	+	miRNA	NOVEL	AC016670.1	1	1	-0.465226
chr2	80288351	80304749	80296550	ENSG00000162951.10	-	protein_coding	KNOWN	LRRTM1	7	3	-0.349483
chr2	80572681	80618777	80595729	ENSG00000237031.7	-	antisense	KNOWN	AC008067.2	11	4	-0.497424
chr2	80699388	80870190	80784789	ENSG00000230975.1	-	lincRNA	KNOWN	AC084193.1	1	5	-0.451782
chr2	81194337	81201184	81197760	ENSG00000234429.1	-	processed_pseudogene	KNOWN	AC105342.1	1	1	-0.298242
chr2	81418723	81419302	81419012	ENSG00000231722.1	-	processed_pseudogene	KNOWN	AC012075.1	1	1	-0.773079
chr2	81462695	81466946	81464820	ENSG00000235519.1	-	lincRNA	KNOWN	AC012075.2	1	2	-0.466004
chr2	81496214	81496327	81496270	ENSG00000200890.1	-	rRNA	KNOWN	RNA5SP99	1	1	-0.658030
chr2	81666477	81666728	81666602	ENSG00000233444.1	-	processed_pseudogene	KNOWN	AC013262.1	1	1	-0.441440
chr2	81967079	81967374	81967226	ENSG00000242118.3	+	misc_RNA	KNOWN	RN7SL201P	1	1	-0.605445
chr2	81983272	82005700	81994486	ENSG00000231781.1	-	lincRNA	KNOWN	AC079896.1	1	5	-0.563294
chr2	82268427	82269927	82269177	ENSG00000229560.1	-	processed_pseudogene	KNOWN	LYARP1	1	1	-0.632035
chr2	82268612	82268706	82268659	ENSG00000252897.1	+	snRNA	KNOWN	RNU6-685P	1	1	-0.632035
chr2	82307067	82307168	82307117	ENSG00000201311.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.501533
chr2	82479128	82538711	82508919	ENSG00000237498.2	-	lincRNA	KNOWN	AC010105.1	1	3	-0.520284
chr2	82609652	82609977	82609814	ENSG00000226860.1	+	processed_pseudogene	KNOWN	AC109638.1	1	1	-0.932670
chr2	82814984	82815516	82815250	ENSG00000226700.1	+	processed_pseudogene	KNOWN	MTND4P25	1	1	-0.288432
chr2	82815809	82817528	82816668	ENSG00000225045.1	+	processed_pseudogene	KNOWN	MTND5P27	1	1	-0.288432
chr2	82817538	82818061	82817799	ENSG00000224695.1	-	processed_pseudogene	KNOWN	MTND6P7	1	1	-0.288432
chr2	82818131	82819264	82818697	ENSG00000227789.1	+	processed_pseudogene	KNOWN	MTCYBP7	1	1	-0.288432
chr2	82856826	82857384	82857105	ENSG00000168129.8	+	processed_pseudogene	KNOWN	AC098817.5	1	1	-0.268410
chr2	83218890	83219105	83218997	ENSG00000223977.1	-	processed_pseudogene	KNOWN	AC138623.1	1	1	-0.355467
chr2	83522814	83523502	83523158	ENSG00000232548.1	+	lincRNA	KNOWN	AC010744.1	1	2	-0.503387
chr2	83594956	83595243	83595099	ENSG00000224627.1	+	processed_pseudogene	KNOWN	RPL37P10	1	1	-0.825546
chr2	83657735	83657842	83657788	ENSG00000199295.1	+	snRNA	KNOWN	RNU6-1312P	1	1	-0.819074
chr2	84031140	84032358	84031749	ENSG00000228225.1	+	processed_pseudogene	KNOWN	AC016908.1	1	1	-0.640197
chr2	84039885	84040720	84040302	ENSG00000228902.1	-	processed_pseudogene	KNOWN	ST6GALNAC2P1	1	1	-0.640197
chr2	84290683	84292202	84291442	ENSG00000182814.7	+	transcribed_processed_pseudogene	KNOWN	FUNDC2P2	2	2	0.003554
chr2	84315108	84350774	84332941	ENSG00000228272.1	+	lincRNA	KNOWN	AC106874.1	1	3	-0.321034
chr2	84374002	84374093	84374047	ENSG00000278669.1	+	miRNA	NOVEL	AC106874.2	1	1	-0.388634
chr2	84423523	84460045	84441784	ENSG00000163541.11	-	protein_coding	KNOWN	SUCLG1	9	9	-0.125618
chr2	84516455	84819589	84668022	ENSG00000115423.18	+	protein_coding	KNOWN	DNAH6	6	77	-0.241884
chr2	84750769	84751231	84751000	ENSG00000259056.1	+	transcribed_unprocessed_pseudogene	KNOWN	DUXAP1	1	1	-0.104405
chr2	84777259	84778223	84777741	ENSG00000235847.2	-	processed_pseudogene	KNOWN	LDHAP7	1	1	-0.385486
chr2	84821650	84907008	84864329	ENSG00000186854.10	-	protein_coding	KNOWN	TRABD2A	10	7	0.337216
chr2	84850711	84851148	84850929	ENSG00000276362.1	+	unprocessed_pseudogene	KNOWN	RP11-241M13.2	1	1	0.454562
chr2	84874696	84875020	84874858	ENSG00000213400.3	+	processed_pseudogene	KNOWN	RPL12P18	1	1	0.344179
chr2	84895085	84895221	84895153	ENSG00000279992.1	-	protein_coding	KNOWN	AC022210.1	1	2	0.340379
chr2	84905625	84906675	84906150	ENSG00000034510.5	+	protein_coding	KNOWN	TMSB10	1	3	0.340379
chr2	84915868	84916660	84916264	ENSG00000213399.3	+	processed_pseudogene	KNOWN	AC022210.2	1	1	0.500208
chr2	84971093	85059472	85015282	ENSG00000176407.17	+	protein_coding	KNOWN	KCMF1	4	7	0.351511
chr2	85064108	85067347	85065727	ENSG00000260840.1	-	lincRNA	KNOWN	RP11-60H5.1	1	2	0.258350
chr2	85068809	85069031	85068920	ENSG00000235463.1	-	processed_pseudogene	KNOWN	AC078974.2	1	1	0.258350
chr2	85102389	85102694	85102541	ENSG00000225787.1	-	processed_pseudogene	KNOWN	LSM3P3	1	1	0.426109
chr2	85133410	85310388	85221899	ENSG00000152284.4	+	protein_coding	KNOWN	TCF7L1	4	12	0.470149
chr2	85186409	85187253	85186831	ENSG00000231134.1	+	sense_intronic	KNOWN	TCF7L1-IT1	1	2	0.462511
chr2	85204926	85205032	85204979	ENSG00000200701.1	+	snRNA	KNOWN	RNU6-674P	1	1	0.446657
chr2	85262144	85262267	85262205	ENSG00000230299.1	-	processed_pseudogene	KNOWN	AC093162.3	1	1	0.522377
chr2	85299034	85299118	85299076	ENSG00000221579.1	+	miRNA	NOVEL	AC093162.1	1	1	0.469796
chr2	85315041	85316529	85315785	ENSG00000246575.2	+	unprocessed_pseudogene	KNOWN	AC093162.5	1	5	0.643129
chr2	85318020	85328425	85323222	ENSG00000152291.13	-	protein_coding	KNOWN	TGOLN2	6	5	0.643129
chr2	85332895	85332996	85332945	ENSG00000239143.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.369526
chr2	85341281	85341838	85341559	ENSG00000270532.1	-	processed_pseudogene	KNOWN	PEBP1P2	1	1	0.369526
chr2	85342088	85354620	85348354	ENSG00000042445.13	-	protein_coding	KNOWN	RETSAT	7	11	0.537295
chr2	85354394	85391752	85373073	ENSG00000115459.17	+	protein_coding	KNOWN	ELMOD3	22	15	0.649857
chr2	85360798	85360925	85360861	ENSG00000271014.1	-	processed_pseudogene	KNOWN	RP11-717A5.1	1	1	0.824511
chr2	85367585	85367686	85367635	ENSG00000202382.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.824511
chr2	85368282	85368580	85368431	ENSG00000278590.1	+	misc_RNA	KNOWN	RN7SL113P	1	1	0.824511
chr2	85387074	85387146	85387110	ENSG00000273196.1	-	antisense	KNOWN	RP11-717A5.2	1	1	0.513572
chr2	85394748	85418432	85406590	ENSG00000042493.15	-	protein_coding	KNOWN	CAPG	15	10	0.646814
chr2	85418721	85437029	85427875	ENSG00000152292.16	+	protein_coding	KNOWN	SH2D6	9	21	0.695907
chr2	85434507	85434619	85434563	ENSG00000207207.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.783870
chr2	85442495	85442791	85442643	ENSG00000244399.3	+	misc_RNA	KNOWN	RN7SL251P	1	1	0.783870
chr2	85460144	85460252	85460198	ENSG00000199936.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.638185
chr2	85490930	85491780	85491355	ENSG00000229648.1	-	processed_pseudogene	KNOWN	RPSAP22	1	1	0.196149
chr2	85539165	85545280	85542222	ENSG00000168906.12	+	protein_coding	KNOWN	MAT2A	6	9	0.574933
chr2	85544723	85561547	85553135	ENSG00000115486.11	-	protein_coding	KNOWN	GGCX	10	15	0.743899
chr2	85561562	85582031	85571796	ENSG00000118640.10	+	protein_coding	KNOWN	VAMP8	3	4	0.632819
chr2	85567662	85567737	85567699	ENSG00000280656.1	-	miRNA	NOVEL	AC016753.1	1	1	0.821095
chr2	85567662	85567960	85567811	ENSG00000276281.1	-	misc_RNA	KNOWN	RN7SL126P	1	1	0.821095
chr2	85573870	85574886	85574378	ENSG00000281331.1	-	protein_coding	KNOWN	AC016753.2	1	2	0.500797
chr2	85584408	85593412	85588910	ENSG00000168899.4	+	protein_coding	KNOWN	VAMP5	2	3	0.616709
chr2	85595725	85597613	85596669	ENSG00000168894.9	+	protein_coding	KNOWN	RNF181	6	5	0.806590
chr2	85598548	85603196	85600872	ENSG00000168890.13	-	protein_coding	KNOWN	TMEM150A	12	8	0.806590
chr2	85602856	85649282	85626069	ENSG00000168883.19	+	protein_coding	KNOWN	USP39	20	14	0.663153
chr2	85606654	85612066	85609360	ENSG00000168887.10	-	protein_coding	KNOWN	C2orf68	5	4	0.796094
chr2	85657314	85668741	85663027	ENSG00000168878.16	-	protein_coding	KNOWN	SFTPB	7	12	0.551423
chr2	85685175	85698854	85692014	ENSG00000115523.16	+	protein_coding	KNOWN	GNLY	14	6	0.488492
chr2	85686053	85687047	85686550	ENSG00000203363.2	-	processed_pseudogene	KNOWN	AC012454.4	1	1	0.961595
chr2	85728194	85728337	85728265	ENSG00000199687.1	-	snRNA	KNOWN	RNU1-38P	1	1	0.410814
chr2	85751344	85788066	85769705	ENSG00000168874.12	+	protein_coding	KNOWN	ATOH8	5	4	0.662740
chr2	85783600	85783677	85783638	ENSG00000278783.1	-	miRNA	KNOWN	MIR6071	1	1	0.451807
chr2	85815130	85825391	85820260	ENSG00000229498.1	+	antisense	KNOWN	AC105053.3	1	3	0.404376
chr2	85820435	85820612	85820523	ENSG00000252321.1	-	misc_RNA	KNOWN	RN7SKP83	1	1	0.404376
chr2	85839144	85889014	85864079	ENSG00000115525.16	-	protein_coding	KNOWN	ST3GAL5	13	7	0.377337
chr2	85889280	85890980	85890130	ENSG00000232504.4	+	lincRNA	KNOWN	ST3GAL5-AS1	1	2	0.499632
chr2	85904279	85904727	85904503	ENSG00000272564.1	+	lincRNA	KNOWN	RP11-548P2.2	1	1	0.460487
chr2	86020216	86106155	86063185	ENSG00000068654.15	-	protein_coding	KNOWN	POLR1A	10	34	0.652710
chr2	86106182	86142157	86124169	ENSG00000132300.18	+	protein_coding	KNOWN	PTCD3	20	24	0.237594
chr2	86135870	86136006	86135938	ENSG00000208772.1	+	snoRNA	KNOWN	SNORD94	1	1	0.129081
chr2	86143932	86195770	86169851	ENSG00000132305.20	-	protein_coding	KNOWN	IMMT	12	15	0.189219
chr2	86159956	86160066	86160011	ENSG00000200241.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.245701
chr2	86193026	86193108	86193067	ENSG00000265420.1	-	miRNA	KNOWN	MIR4779	1	1	0.212917
chr2	86195590	86196049	86195819	ENSG00000273080.1	+	antisense	KNOWN	RP11-301O19.1	1	1	0.212917
chr2	86199355	86213794	86206574	ENSG00000132313.14	+	protein_coding	KNOWN	MRPL35	4	5	0.228347
chr2	86213993	86338083	86276038	ENSG00000068615.16	-	protein_coding	KNOWN	REEP1	11	7	0.073872
chr2	86347062	86347195	86347128	ENSG00000202537.1	-	snoRNA	NOVEL	U8	1	1	0.099686
chr2	86364136	86364265	86364200	ENSG00000251974.1	+	snoRNA	NOVEL	SNORA19	1	1	0.202416
chr2	86440647	86492716	86466681	ENSG00000115548.16	+	protein_coding	KNOWN	KDM3A	16	27	-0.001540
chr2	86503431	86563479	86533455	ENSG00000115561.15	-	protein_coding	KNOWN	CHMP3	9	6	0.086446
chr2	86505668	86721122	86613395	ENSG00000249884.8	-	protein_coding	KNOWN	RNF103-CHMP3	2	8	-0.175148
chr2	86515204	86515308	86515256	ENSG00000200563.1	-	snRNA	KNOWN	RNU6-640P	1	1	0.045198
chr2	86562070	86618766	86590418	ENSG00000228363.2	+	antisense	KNOWN	AC015971.2	4	6	-0.246879
chr2	86567320	86567464	86567392	ENSG00000281177.1	-	miRNA	NOVEL	AC015971.3	1	1	0.362521
chr2	86586140	86586230	86586185	ENSG00000252453.2	+	miRNA	NOVEL	AC015971.1	1	1	-0.191801
chr2	86603393	86623866	86613629	ENSG00000239305.6	-	protein_coding	KNOWN	RNF103	6	5	-0.208847
chr2	86720173	86778041	86749107	ENSG00000153561.12	+	protein_coding	KNOWN	RMND5A	4	9	0.014313
chr2	86779030	86779127	86779078	ENSG00000281148.1	-	miRNA	NOVEL	AC064848.1	1	1	-0.245781
chr2	86784610	86808396	86796503	ENSG00000153563.15	-	protein_coding	KNOWN	CD8A	4	9	-0.070411
chr2	86815339	86861924	86838631	ENSG00000172116.21	-	protein_coding	KNOWN	CD8B	6	7	0.000301
chr2	86861825	86922693	86892259	ENSG00000233673.6	+	transcribed_unprocessed_pseudogene	KNOWN	ANAPC1P1	2	17	-0.059287
chr2	86885075	86885731	86885403	ENSG00000213605.2	-	processed_pseudogene	KNOWN	AC111200.2	1	1	-0.174182
chr2	86907953	87013981	86960967	ENSG00000187627.14	+	protein_coding	KNOWN	RGPD1	4	23	-0.155682
chr2	86930250	86930754	86930502	ENSG00000231351.2	-	processed_pseudogene	KNOWN	AC111200.7	1	1	-0.150369
chr2	86934462	86934822	86934642	ENSG00000226114.1	-	processed_pseudogene	KNOWN	AC111200.8	1	1	-0.150369
chr2	87002559	87021852	87012205	ENSG00000183281.14	-	protein_coding	KNOWN	PLGLB1	7	5	-0.155021
chr2	87031815	87053069	87042442	ENSG00000231259.4	-	unprocessed_pseudogene	KNOWN	AC125232.1	1	8	-0.266110
chr2	87055658	87055800	87055729	ENSG00000266931.1	-	unprocessed_pseudogene	KNOWN	RP11-1252D15.1	1	1	-0.201999
chr2	87118534	87120980	87119757	ENSG00000230395.1	-	unprocessed_pseudogene	KNOWN	AC092651.1	1	3	-0.282857
chr2	87125390	87196647	87161018	ENSG00000204745.3	+	unprocessed_pseudogene	KNOWN	AC083899.3	1	31	-0.313487
chr2	87194786	87194859	87194822	ENSG00000264793.1	+	miRNA	KNOWN	MIR4771-1	1	1	-0.384446
chr2	87221113	87222488	87221800	ENSG00000233671.1	-	processed_pseudogene	KNOWN	AC083899.1	1	1	0.100029
chr2	87249095	87253750	87251422	ENSG00000281477.1	-	lincRNA	KNOWN	RP11-223J6.2	1	2	0.573185
chr2	87301658	87302251	87301954	ENSG00000271097.1	+	processed_pseudogene	KNOWN	RP11-223J6.1	1	1	0.108294
chr2	87338511	87339035	87338773	ENSG00000233999.3	+	IG_V_gene	KNOWN	IGKV3OR2-268	1	2	0.290119
chr2	87379880	87380767	87380323	ENSG00000224881.1	-	processed_pseudogene	KNOWN	AC068279.3	1	1	-0.031523
chr2	87439523	87459044	87449283	ENSG00000280721.1	-	lincRNA	KNOWN	AC133644.2	3	2	0.590331
chr2	87455368	87606805	87531086	ENSG00000222041.10	+	lincRNA	KNOWN	LINC00152	14	4	0.298093
chr2	87477495	87478034	87477764	ENSG00000273445.1	-	antisense	KNOWN	RP11-1399P15.1	1	1	0.302830
chr2	87565828	87566764	87566296	ENSG00000214354.3	-	processed_pseudogene	KNOWN	AC133644.3	1	1	0.286495
chr2	87629755	87629834	87629794	ENSG00000265507.1	+	miRNA	KNOWN	MIR4435-1	1	1	0.033397
chr2	87654890	87655243	87655066	ENSG00000225933.1	+	processed_pseudogene	KNOWN	AC133965.1	1	1	0.211731
chr2	87700984	87738105	87719544	ENSG00000234231.3	+	unprocessed_pseudogene	KNOWN	AC093616.4	1	15	-0.019687
chr2	87748087	87758793	87753440	ENSG00000125551.18	+	protein_coding	KNOWN	PLGLB2	3	5	0.035637
chr2	87755955	87825952	87790953	ENSG00000185304.13	-	protein_coding	KNOWN	RGPD2	2	23	-0.055742
chr2	87824942	87825143	87825042	ENSG00000229604.2	+	processed_pseudogene	KNOWN	MTATP8P2	1	1	-0.309625
chr2	87968609	87968971	87968790	ENSG00000225428.1	+	processed_pseudogene	KNOWN	AC108479.1	1	1	-0.428399
chr2	87972656	87973082	87972869	ENSG00000233205.1	+	processed_pseudogene	KNOWN	AC108479.2	1	1	-0.112547
chr2	87980714	87992858	87986786	ENSG00000275597.1	-	unprocessed_pseudogene	KNOWN	RP11-1378G18.1	1	5	-0.087827
chr2	88016354	88016547	88016450	ENSG00000222724.1	-	snRNA	KNOWN	RNU2-63P	1	1	0.100355
chr2	88027205	88055729	88041467	ENSG00000172086.7	-	protein_coding	KNOWN	KRCC1	1	4	-0.043087
chr2	88055665	88055791	88055728	ENSG00000275955.1	-	miRNA	NOVEL	AC108479.3	1	1	-0.151737
chr2	88067780	88113387	88090583	ENSG00000115593.14	+	protein_coding	KNOWN	SMYD1	4	10	0.020278
chr2	88082519	88082599	88082559	ENSG00000265003.1	-	miRNA	KNOWN	MIR4780	1	1	0.037199
chr2	88122982	88128116	88125549	ENSG00000163586.9	-	protein_coding	KNOWN	FABP1	4	4	0.027503
chr2	88170295	88186636	88178465	ENSG00000144115.16	+	protein_coding	KNOWN	THNSL2	10	9	-0.186609
chr2	88294592	88294679	88294635	ENSG00000221619.2	+	miRNA	NOVEL	AC012671.1	1	1	-0.151737
chr2	88364695	88365608	88365151	ENSG00000232508.1	-	processed_pseudogene	KNOWN	MRPL45P1	1	1	-0.185993
chr2	88374139	88374239	88374189	ENSG00000266309.1	+	miRNA	NOVEL	AC012671.3	1	1	-0.353419
chr2	88383494	88383597	88383545	ENSG00000212133.1	-	snRNA	KNOWN	RNU6-1168P	1	1	-0.353419
chr2	88414898	88415004	88414951	ENSG00000252395.2	-	snRNA	KNOWN	RNU6-1007P	1	1	-0.185303
chr2	88428078	88428615	88428346	ENSG00000224291.1	+	processed_pseudogene	KNOWN	AC012671.2	1	2	-0.185303
chr2	88446787	88452656	88449721	ENSG00000214336.4	-	protein_coding	KNOWN	FOXI3	1	2	0.057836
chr2	88462767	88462867	88462817	ENSG00000274377.1	-	miRNA	NOVEL	AC012671.4	1	1	-0.094421
chr2	88524651	88529584	88527117	ENSG00000172073.3	+	protein_coding	KNOWN	TEX37	1	4	0.171719
chr2	88538720	88575610	88557165	ENSG00000225420.1	+	antisense	KNOWN	AC104134.2	1	3	-0.146140
chr2	88556741	88627576	88592158	ENSG00000172071.11	-	protein_coding	KNOWN	EIF2AK3	6	17	-0.261620
chr2	88627539	88631821	88629680	ENSG00000234028.3	+	antisense	KNOWN	AC062029.1	2	2	-0.135238
chr2	88691644	88750935	88721289	ENSG00000153574.8	+	protein_coding	KNOWN	RPIA	1	9	-0.218377
chr2	88765807	88806612	88786209	ENSG00000230006.7	+	transcribed_unprocessed_pseudogene	KNOWN	ANKRD36BP2	7	17	-0.396536
chr2	88767318	88767413	88767365	ENSG00000221686.1	+	miRNA	NOVEL	AC244205.1	1	1	0.179455
chr2	88811186	88861563	88836374	ENSG00000240040.5	-	lincRNA	KNOWN	AC096579.13	2	3	-0.296405
chr2	88812370	88812454	88812412	ENSG00000265510.1	+	miRNA	KNOWN	MIR4436A	1	1	-0.236334
chr2	88857161	89046465	88951813	ENSG00000211592.7	-	IG_C_gene	KNOWN	IGKC	3	5	-0.284412
chr2	88857517	89040745	88949131	ENSG00000243290.2	-	IG_V_gene	KNOWN	IGKV1-12	2	5	-0.279394
chr2	88857517	89010451	88933984	ENSG00000240671.3	-	IG_V_gene	KNOWN	IGKV1-8	2	6	-0.289339
chr2	88860568	88860605	88860586	ENSG00000211593.2	-	IG_J_gene	KNOWN	IGKJ5	1	1	-0.437033
chr2	88860886	88860922	88860904	ENSG00000211594.2	-	IG_J_gene	KNOWN	IGKJ4	1	1	-0.437033
chr2	88861221	88861258	88861239	ENSG00000211595.2	-	IG_J_gene	KNOWN	IGKJ3	1	1	-0.437033
chr2	88861525	88861563	88861544	ENSG00000211596.3	-	IG_J_gene	KNOWN	IGKJ2	1	1	-0.437033
chr2	88861886	88861923	88861904	ENSG00000211597.2	-	IG_J_gene	KNOWN	IGKJ1	1	1	-0.437033
chr2	88885397	88886153	88885775	ENSG00000211598.2	+	IG_V_gene	KNOWN	IGKV4-1	1	2	-0.055439
chr2	88897232	88897784	88897508	ENSG00000211599.2	+	IG_V_gene	KNOWN	IGKV5-2	1	2	-0.277242
chr2	88915081	88915378	88915229	ENSG00000197794.2	-	IG_V_pseudogene	KNOWN	IGKV7-3	1	1	-0.488632
chr2	88922328	88922753	88922540	ENSG00000225136.1	-	processed_pseudogene	KNOWN	PGBD4P5	1	1	-0.488632
chr2	88931666	88932380	88932023	ENSG00000253435.1	-	IG_V_pseudogene	KNOWN	IGKV2-4	1	2	-0.206349
chr2	88947301	88947957	88947629	ENSG00000243466.1	-	IG_V_gene	KNOWN	IGKV1-5	1	2	-0.206349
chr2	88966262	88966767	88966514	ENSG00000239855.1	-	IG_V_gene	KNOWN	IGKV1-6	1	2	-0.242077
chr2	88978468	88979081	88978774	ENSG00000243063.1	-	IG_V_gene	KNOWN	IGKV3-7	1	2	-0.076046
chr2	89009982	89010515	89010248	ENSG00000241755.1	-	IG_V_gene	KNOWN	IGKV1-9	1	2	-0.130870
chr2	89019992	89020686	89020339	ENSG00000253278.1	-	IG_V_pseudogene	KNOWN	IGKV2-10	1	2	-0.115700
chr2	89027171	89027731	89027451	ENSG00000241351.3	-	IG_V_gene	KNOWN	IGKV3-11	1	2	-0.115700
chr2	89045995	89046466	89046230	ENSG00000253497.1	-	IG_V_pseudogene	KNOWN	IGKV1-13	1	2	-0.435638
chr2	89078010	89078784	89078397	ENSG00000253265.1	-	IG_V_pseudogene	KNOWN	IGKV2-14	1	2	-0.254740
chr2	89085177	89085787	89085482	ENSG00000244437.1	-	IG_V_gene	KNOWN	IGKV3-15	1	2	-0.254740
chr2	89099859	89100361	89100110	ENSG00000240864.3	-	IG_V_gene	KNOWN	IGKV1-16	1	2	-0.539226
chr2	89117342	89117844	89117593	ENSG00000240382.3	-	IG_V_gene	KNOWN	IGKV1-17	1	2	-0.311132
chr2	89128724	89129483	89129103	ENSG00000254157.1	-	IG_V_pseudogene	KNOWN	IGKV2-18	1	2	-0.311132
chr2	89134975	89135257	89135116	ENSG00000253732.1	-	IG_V_pseudogene	KNOWN	IGKV2-19	1	1	-0.613895
chr2	89142574	89143160	89142867	ENSG00000239951.1	-	IG_V_gene	KNOWN	IGKV3-20	1	2	-0.613895
chr2	89159751	89160366	89160058	ENSG00000211611.2	-	IG_V_gene	KNOWN	IGKV6-21	1	2	-0.201999
chr2	89170775	89171212	89170993	ENSG00000253578.1	-	IG_V_pseudogene	KNOWN	IGKV1-22	1	2	-0.353696
chr2	89172022	89172553	89172287	ENSG00000253625.1	-	IG_V_pseudogene	KNOWN	IGKV2-23	1	2	-0.353696
chr2	89176328	89177160	89176744	ENSG00000241294.1	-	IG_V_gene	KNOWN	IGKV2-24	1	2	-0.353696
chr2	89192500	89192752	89192626	ENSG00000253202.1	-	IG_V_pseudogene	KNOWN	IGKV3-25	1	1	-0.597408
chr2	89196096	89196829	89196462	ENSG00000254098.1	-	IG_V_pseudogene	KNOWN	IGKV2-26	1	2	-0.597408
chr2	89203509	89203906	89203707	ENSG00000277852.1	-	unprocessed_pseudogene	KNOWN	RP11-421K23.1	1	1	-0.597408
chr2	89213423	89213928	89213675	ENSG00000244575.3	-	IG_V_gene	KNOWN	IGKV1-27	1	2	-0.264439
chr2	89221698	89222461	89222079	ENSG00000244116.3	-	IG_V_gene	KNOWN	IGKV2-28	1	2	-0.264439
chr2	89234174	89234912	89234543	ENSG00000253998.3	-	IG_V_pseudogene	KNOWN	IGKV2-29	1	2	-0.136709
chr2	89244781	89245596	89245188	ENSG00000243238.1	-	IG_V_gene	KNOWN	IGKV2-30	1	2	-0.136709
chr2	89252211	89252736	89252473	ENSG00000253158.1	-	IG_V_pseudogene	KNOWN	IGKV3-31	1	2	-0.042494
chr2	89253571	89254015	89253793	ENSG00000253870.1	-	IG_V_pseudogene	KNOWN	IGKV1-32	1	2	-0.042494
chr2	89266494	89268506	89267500	ENSG00000242076.2	-	IG_V_gene	KNOWN	IGKV1-33	2	2	-0.042494
chr2	89275298	89275787	89275542	ENSG00000253860.1	-	IG_V_pseudogene	KNOWN	IGKV3-34	1	2	-0.104073
chr2	89286689	89286973	89286831	ENSG00000253461.1	-	IG_V_pseudogene	KNOWN	IGKV1-35	1	1	-0.104073
chr2	89295233	89295455	89295344	ENSG00000253487.1	-	IG_V_pseudogene	KNOWN	IGKV2-36	1	1	0.106419
chr2	89297264	89297785	89297524	ENSG00000239862.1	-	IG_V_gene	KNOWN	IGKV1-37	1	2	0.106419
chr2	89309898	89310144	89310021	ENSG00000253592.1	-	IG_V_pseudogene	KNOWN	IGKV2-38	1	1	0.057891
chr2	89319625	89320146	89319885	ENSG00000242371.1	-	IG_V_gene	KNOWN	IGKV1-39	1	2	0.024088
chr2	89330110	89330429	89330269	ENSG00000273962.1	-	IG_V_gene	KNOWN	IGKV2-40	2	1	0.117303
chr2	89600571	89600680	89600625	ENSG00000276861.1	+	rRNA	NOVEL	5S_rRNA	1	1	0.318957
chr2	89851791	89852497	89852144	ENSG00000251039.2	+	IG_V_gene	KNOWN	IGKV2D-40	2	2	0.151963
chr2	89862482	89862981	89862731	ENSG00000251546.1	+	IG_V_gene	KNOWN	IGKV1D-39	1	2	0.151963
chr2	89872463	89872702	89872582	ENSG00000254009.1	+	IG_V_pseudogene	KNOWN	IGKV2D-38	1	1	-0.135242
chr2	89884740	89885216	89884978	ENSG00000250036.1	+	IG_V_gene	KNOWN	IGKV1D-37	1	2	-0.135242
chr2	89887022	89887247	89887134	ENSG00000253127.1	+	IG_V_pseudogene	KNOWN	IGKV2D-36	1	1	-0.135242
chr2	89895502	89895772	89895637	ENSG00000232747.2	+	IG_V_pseudogene	KNOWN	IGKV1D-35	1	1	-0.068473
chr2	89906757	89907246	89907001	ENSG00000253501.1	+	IG_V_pseudogene	KNOWN	IGKV3D-34	1	2	-0.068473
chr2	89913982	89916052	89915017	ENSG00000239975.2	+	IG_V_gene	KNOWN	IGKV1D-33	2	2	0.157415
chr2	89928422	89928867	89928644	ENSG00000253191.1	+	IG_V_pseudogene	KNOWN	IGKV1D-32	1	2	0.157415
chr2	89929701	89930202	89929951	ENSG00000253999.1	+	IG_V_pseudogene	KNOWN	IGKV3D-31	1	2	0.108358
chr2	89936859	89937679	89937269	ENSG00000239571.1	+	IG_V_gene	KNOWN	IGKV2D-30	1	2	0.036344
chr2	89947512	89948279	89947895	ENSG00000243264.2	+	IG_V_gene	KNOWN	IGKV2D-29	2	2	0.036344
chr2	89959979	89960754	89960366	ENSG00000242534.2	+	IG_V_gene	KNOWN	IGKV2D-28	2	2	0.049347
chr2	89968867	89969335	89969101	ENSG00000224607.4	+	IG_V_pseudogene	KNOWN	IGKV1D-27	1	2	0.049347
chr2	89985922	89986702	89986312	ENSG00000211623.2	+	IG_V_gene	KNOWN	IGKV2D-26	1	2	-0.132795
chr2	89989987	89990221	89990104	ENSG00000254097.1	+	IG_V_pseudogene	KNOWN	IGKV3D-25	1	1	-0.444636
chr2	90004797	90005629	90005213	ENSG00000241566.1	+	IG_V_gene	KNOWN	IGKV2D-24	1	2	-0.461492
chr2	90009402	90009927	90009664	ENSG00000254345.1	+	IG_V_pseudogene	KNOWN	IGKV2D-23	1	2	-0.461492
chr2	90010741	90011184	90010962	ENSG00000253365.1	+	IG_V_pseudogene	KNOWN	IGKV1D-22	1	2	-0.713739
chr2	90021567	90022185	90021876	ENSG00000225523.2	+	IG_V_gene	KNOWN	IGKV6D-21	1	2	-0.713739
chr2	90038848	90039479	90039163	ENSG00000211625.2	+	IG_V_gene	KNOWN	IGKV3D-20	1	2	-0.160929
chr2	90046796	90047057	90046926	ENSG00000253765.1	+	IG_V_pseudogene	KNOWN	IGKV2D-19	1	1	-0.160929
chr2	90052581	90053372	90052976	ENSG00000254220.1	+	IG_V_pseudogene	KNOWN	IGKV2D-18	1	2	-0.308888
chr2	90069662	90070238	90069950	ENSG00000211626.2	+	IG_V_gene	KNOWN	IGKV6D-41	1	2	-0.313729
chr2	90082635	90083291	90082963	ENSG00000242766.1	+	IG_V_gene	KNOWN	IGKV1D-17	1	2	-0.320556
chr2	90100236	90100738	90100487	ENSG00000241244.1	+	IG_V_gene	KNOWN	IGKV1D-16	1	2	-0.489650
chr2	90114838	90115402	90115120	ENSG00000224041.3	+	IG_V_gene	KNOWN	IGKV3D-15	1	2	-0.328340
chr2	90114902	90173414	90144158	ENSG00000211632.3	+	IG_V_gene	KNOWN	IGKV3D-11	2	2	-0.379383
chr2	90121786	90122564	90122175	ENSG00000254292.1	+	IG_V_pseudogene	KNOWN	IGKV2D-14	1	2	-0.328340
chr2	90154073	90154574	90154323	ENSG00000276566.1	+	IG_V_gene	KNOWN	IGKV1D-13	1	2	-0.465490
chr2	90159840	90160335	90160087	ENSG00000278857.1	+	IG_V_gene	KNOWN	IGKV1D-12	1	2	-0.465490
chr2	90179889	90180587	90180238	ENSG00000253906.1	+	IG_V_pseudogene	KNOWN	IGKV2D-10	1	2	-0.237072
chr2	90190193	90190681	90190437	ENSG00000211633.3	+	IG_V_gene	KNOWN	IGKV1D-42	1	2	-0.674268
chr2	90209873	90210529	90210201	ENSG00000242580.1	+	IG_V_gene	KNOWN	IGKV1D-43	1	2	-0.295303
chr2	90220727	90221384	90221055	ENSG00000239819.2	+	IG_V_gene	KNOWN	IGKV1D-8	1	2	-0.205209
chr2	90234812	90235370	90235091	ENSG00000228325.5	+	IG_V_gene	KNOWN	IGKV3D-7	1	2	-0.129298
chr2	90309230	90309333	90309281	ENSG00000275490.1	+	unprocessed_pseudogene	KNOWN	CH17-132F21.4	1	1	0.337792
chr2	90315366	90315836	90315601	ENSG00000270999.1	-	IG_V_pseudogene	KNOWN	IGKV1OR2-118	1	2	-0.272581
chr2	90359809	90360032	90359920	ENSG00000265897.2	-	processed_pseudogene	KNOWN	AC018696.1	1	1	-0.622065
chr2	90365737	90367699	90366718	ENSG00000281904.1	+	lincRNA	KNOWN	CH17-132F21.5	1	1	-0.622065
chr2	91578478	91578573	91578525	ENSG00000230964.1	+	processed_pseudogene	KNOWN	AC018696.4	1	1	0.146561
chr2	91580336	91580863	91580599	ENSG00000261600.1	+	lincRNA	KNOWN	RP11-575H3.1	1	1	0.146561
chr2	91589494	91621421	91605457	ENSG00000278131.1	+	unprocessed_pseudogene	KNOWN	AC116050.1	1	5	0.039708
chr2	91617160	91659972	91638566	ENSG00000143429.10	-	transcribed_unprocessed_pseudogene	KNOWN	AC027612.6	6	4	0.196552
chr2	91674857	91674966	91674911	ENSG00000222835.1	+	rRNA	KNOWN	RNA5SP100	1	1	0.042143
chr2	91684447	91685884	91685165	ENSG00000184303.5	-	processed_pseudogene	KNOWN	DRD5P1	1	1	0.042143
chr2	91686102	91714745	91700423	ENSG00000230572.5	-	transcribed_unprocessed_pseudogene	KNOWN	AC027612.3	2	10	-0.257791
chr2	91723023	91723605	91723314	ENSG00000271627.1	+	processed_pseudogene	KNOWN	RP11-165D20.1	1	1	-0.372140
chr2	91736726	91767439	91752082	ENSG00000223703.1	+	unprocessed_pseudogene	KNOWN	AC027612.4	1	6	-0.324217
chr2	91747940	91748986	91748463	ENSG00000232531.3	-	processed_pseudogene	KNOWN	AC027612.1	1	1	-0.269853
chr2	91763925	91764018	91763971	ENSG00000238320.1	+	miRNA	NOVEL	AC027612.2	1	1	-0.365591
chr2	91775944	91781169	91778556	ENSG00000236969.2	+	unprocessed_pseudogene	KNOWN	GGT8P	1	3	0.134636
chr2	91817771	91818248	91818009	ENSG00000235235.6	+	IG_V_pseudogene	KNOWN	IGKV1OR2-1	1	2	-0.283517
chr2	91840601	91843802	91842201	ENSG00000214330.4	+	unprocessed_pseudogene	KNOWN	ABCD1P5	1	3	-0.144448
chr2	91859384	91859481	91859432	ENSG00000237085.2	+	processed_pseudogene	KNOWN	AC127391.3	1	1	-0.001118
chr2	91877969	91880195	91879082	ENSG00000227497.1	+	processed_pseudogene	KNOWN	PABPC1P6	1	2	-0.504322
chr2	91883076	91931714	91907395	ENSG00000214329.7	-	transcribed_unprocessed_pseudogene	KNOWN	SLC9B1P2	2	8	-0.523717
chr2	91940668	91942040	91941354	ENSG00000226481.3	+	processed_pseudogene	KNOWN	ACTR3BP2	1	1	-0.584810
chr2	91957436	91963610	91960523	ENSG00000234898.1	+	unprocessed_pseudogene	KNOWN	CHEK2P3	1	3	-0.366635
chr2	92006680	92007121	92006900	ENSG00000235147.1	-	processed_pseudogene	KNOWN	AC128677.3	1	1	-0.061483
chr2	92034522	92035000	92034761	ENSG00000223816.5	-	unprocessed_pseudogene	KNOWN	IGKV1OR2-2	1	2	-0.250896
chr2	94575976	94587183	94581579	ENSG00000261522.5	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-407P15.1	2	4	-0.159844
chr2	94588522	94604573	94596547	ENSG00000259916.1	+	protein_coding	KNOWN	RP11-407P15.2	1	7	0.141064
chr2	94725674	94725935	94725804	ENSG00000237383.1	-	processed_pseudogene	KNOWN	CNN2P11	1	1	-0.634147
chr2	94734655	94735844	94735249	ENSG00000227265.2	-	processed_pseudogene	KNOWN	AC073464.4	1	1	0.013040
chr2	94737337	94738249	94737793	ENSG00000213355.3	+	processed_pseudogene	KNOWN	CNN2P8	1	1	0.013040
chr2	94750582	94751293	94750937	ENSG00000234837.1	+	processed_pseudogene	KNOWN	AC073464.6	1	1	-0.192985
chr2	94759259	94760279	94759769	ENSG00000223564.1	-	unprocessed_pseudogene	KNOWN	CYP4F32P	1	3	-0.192985
chr2	94760774	94761116	94760945	ENSG00000232502.1	-	processed_pseudogene	KNOWN	AC073464.7	1	1	-0.192985
chr2	94786688	94787261	94786974	ENSG00000235571.1	-	processed_pseudogene	KNOWN	SNX18P14	1	1	-0.064734
chr2	94795808	94806452	94801130	ENSG00000204717.4	-	unprocessed_pseudogene	KNOWN	AC073464.11	1	3	-0.171043
chr2	94811046	94857282	94834164	ENSG00000229089.6	-	transcribed_unprocessed_pseudogene	KNOWN	ANKRD20A8P	3	15	-0.441963
chr2	94846533	94846639	94846586	ENSG00000212140.1	-	snRNA	KNOWN	RNU6-1320P	1	1	-0.404313
chr2	94861362	94862667	94862014	ENSG00000278631.1	+	processed_pseudogene	KNOWN	RP11-71B7.1	1	1	-0.476520
chr2	94867486	94947341	94907413	ENSG00000259848.8	-	transcribed_unprocessed_pseudogene	KNOWN	AC097374.2	3	10	-0.140383
chr2	94871433	94876829	94874131	ENSG00000163060.7	+	protein_coding	KNOWN	TEKT4	2	6	0.453630
chr2	94899566	94900661	94900113	ENSG00000237055.1	-	processed_pseudogene	KNOWN	AC097374.3	1	1	-0.245781
chr2	94900990	94901602	94901296	ENSG00000232128.1	+	processed_pseudogene	KNOWN	AC097374.4	1	1	-0.245781
chr2	94912432	94912831	94912631	ENSG00000233158.1	+	processed_pseudogene	KNOWN	RPS24P6	1	1	-0.394836
chr2	94953161	94953593	94953377	ENSG00000231331.1	-	unprocessed_pseudogene	KNOWN	AC103563.2	1	2	-0.290095
chr2	94961047	94961503	94961275	ENSG00000232594.1	-	unprocessed_pseudogene	KNOWN	AC103563.3	1	2	-0.290095
chr2	94964473	94964836	94964654	ENSG00000233105.1	-	unprocessed_pseudogene	KNOWN	AC103563.4	1	1	-0.290095
chr2	94971954	94972167	94972060	ENSG00000224585.1	-	unprocessed_pseudogene	KNOWN	AC103563.5	1	2	-0.120312
chr2	94974544	94974838	94974691	ENSG00000233447.1	-	unprocessed_pseudogene	KNOWN	AC103563.6	1	1	-0.120312
chr2	94991880	94994362	94993121	ENSG00000235186.1	+	unprocessed_pseudogene	KNOWN	AC103563.7	1	2	0.450623
chr2	95003545	95003843	95003694	ENSG00000277591.1	-	misc_RNA	KNOWN	RN7SL575P	1	1	0.450623
chr2	95025193	95026709	95025951	ENSG00000233850.1	-	antisense	KNOWN	AC103563.8	1	3	-0.115521
chr2	95025677	95053996	95039836	ENSG00000172005.10	+	protein_coding	KNOWN	MAL	5	4	0.175680
chr2	95051395	95053176	95052285	ENSG00000231062.1	-	antisense	KNOWN	AC103563.9	1	2	0.339545
chr2	95087207	95149434	95118320	ENSG00000144029.11	-	protein_coding	KNOWN	MRPS5	8	12	0.118423
chr2	95147330	95165413	95156371	ENSG00000144026.11	-	protein_coding	KNOWN	ZNF514	4	5	0.229296
chr2	95165432	95184317	95174874	ENSG00000275111.4	+	protein_coding	KNOWN	ZNF2	5	5	0.082514
chr2	95196449	95197357	95196903	ENSG00000275768.1	-	unprocessed_pseudogene	KNOWN	RP11-11P22.1	1	1	0.473421
chr2	95207535	95259774	95233654	ENSG00000233757.6	+	protein_coding	KNOWN	AC092835.2	3	5	0.039601
chr2	95274453	95291308	95282880	ENSG00000155066.15	+	protein_coding	KNOWN	PROM2	11	24	0.495553
chr2	95297304	95386083	95341693	ENSG00000115041.12	+	protein_coding	KNOWN	KCNIP3	7	9	0.471495
chr2	95368507	95368885	95368696	ENSG00000235129.1	-	processed_pseudogene	KNOWN	FABP7P2	1	1	0.531371
chr2	95402721	95416616	95409668	ENSG00000115042.9	+	protein_coding	KNOWN	FAHD2A	6	9	0.447140
chr2	95413456	95414296	95413876	ENSG00000248821.1	-	unprocessed_pseudogene	KNOWN	AC009238.6	1	3	0.478541
chr2	95434759	95435113	95434936	ENSG00000233275.1	+	processed_pseudogene	KNOWN	AC009238.8	1	1	0.328598
chr2	95436133	95436556	95436344	ENSG00000227120.1	+	processed_pseudogene	KNOWN	AC009238.7	1	1	0.328598
chr2	95450310	95451500	95450905	ENSG00000204705.3	-	unprocessed_pseudogene	KNOWN	UBTFL5	1	1	-0.080475
chr2	95460144	95460336	95460240	ENSG00000277747.1	-	unprocessed_pseudogene	KNOWN	RP11-404J24.1	1	1	-0.080475
chr2	95468863	95469778	95469320	ENSG00000234903.1	-	unprocessed_pseudogene	KNOWN	AC133104.2	1	2	-0.080475
chr2	95477164	95482714	95479939	ENSG00000144010.8	-	unprocessed_pseudogene	KNOWN	TRIM43B	1	6	-0.345414
chr2	95485541	95485805	95485673	ENSG00000238162.1	+	processed_pseudogene	KNOWN	AC009237.4	1	1	-0.345414
chr2	95486480	95488627	95487553	ENSG00000223917.1	-	unprocessed_pseudogene	KNOWN	AC009237.2	1	3	-0.345414
chr2	95496022	95496531	95496276	ENSG00000237308.1	-	processed_pseudogene	KNOWN	AC009237.5	1	1	-0.542137
chr2	95502791	95505059	95503925	ENSG00000224719.1	+	unprocessed_pseudogene	KNOWN	AC009237.6	1	2	-0.542137
chr2	95514827	95520107	95517467	ENSG00000226185.1	+	unprocessed_pseudogene	KNOWN	TRIM64FP	1	7	-0.457170
chr2	95525109	95526702	95525905	ENSG00000272913.1	-	lincRNA	KNOWN	RP11-440D17.3	1	1	-0.457170
chr2	95525345	95532405	95528875	ENSG00000229689.3	+	transcribed_unprocessed_pseudogene	KNOWN	AC009237.8	3	3	-0.321535
chr2	95536117	95536495	95536306	ENSG00000236431.1	-	processed_pseudogene	KNOWN	AC009237.11	1	1	-0.059172
chr2	95537969	95538469	95538219	ENSG00000273305.1	+	lincRNA	KNOWN	RP11-440D17.4	1	1	-0.059172
chr2	95542730	95543230	95542980	ENSG00000233037.2	-	processed_pseudogene	KNOWN	AC009237.10	1	1	-0.059172
chr2	95546531	95547545	95547038	ENSG00000168992.4	+	unprocessed_pseudogene	KNOWN	OR7E102P	1	1	-0.059172
chr2	95574899	95580764	95577831	ENSG00000232717.1	+	unprocessed_pseudogene	KNOWN	TRIM51JP	1	6	-0.250240
chr2	95588149	95589253	95588701	ENSG00000274028.1	+	unprocessed_pseudogene	KNOWN	RP11-440D17.5	1	2	-0.250240
chr2	95590969	95591206	95591087	ENSG00000230083.1	-	processed_pseudogene	KNOWN	AC009237.13	1	1	-0.400289
chr2	95592018	95599778	95595898	ENSG00000144015.4	+	protein_coding	KNOWN	TRIM43	1	7	-0.400289
chr2	95606924	95607152	95607038	ENSG00000236026.1	+	processed_pseudogene	KNOWN	AC009237.14	1	1	-0.400289
chr2	95607073	95616592	95611832	ENSG00000271003.1	+	unprocessed_pseudogene	KNOWN	RP11-440D17.1	1	2	-0.180932
chr2	95616492	95617233	95616862	ENSG00000270193.1	+	processed_pseudogene	KNOWN	RP11-440D17.2	1	1	-0.083580
chr2	95625213	95626236	95625724	ENSG00000204699.4	+	unprocessed_pseudogene	KNOWN	UBTFL3	1	1	-0.083580
chr2	95633850	95636106	95634978	ENSG00000275497.1	+	unprocessed_pseudogene	KNOWN	RP11-440D17.6	1	2	0.049928
chr2	95640181	95640604	95640392	ENSG00000235959.1	-	processed_pseudogene	KNOWN	AC009237.17	1	1	0.049928
chr2	95641634	95641980	95641807	ENSG00000236750.1	-	processed_pseudogene	KNOWN	AC009237.16	1	1	0.049928
chr2	95666084	95668715	95667399	ENSG00000235584.2	+	lincRNA	KNOWN	AC008268.1	1	2	0.461686
chr2	95789654	95800166	95794910	ENSG00000237510.7	+	transcribed_unprocessed_pseudogene	KNOWN	AC008268.2	2	14	0.560063
chr2	95807118	95816215	95811666	ENSG00000232931.5	-	lincRNA	KNOWN	LINC00342	2	5	0.015312
chr2	95836919	95991831	95914375	ENSG00000174501.14	-	protein_coding	KNOWN	ANKRD36C	8	67	-0.186593
chr2	96004563	96004850	96004706	ENSG00000275961.1	-	misc_RNA	KNOWN	RN7SL210P	1	1	0.199476
chr2	96010551	96023380	96016965	ENSG00000231584.8	+	transcribed_unprocessed_pseudogene	KNOWN	FAHD2CP	5	8	0.323865
chr2	96021946	96039451	96030698	ENSG00000186281.12	-	protein_coding	KNOWN	GPAT2	10	23	0.589257
chr2	96112875	96116245	96114560	ENSG00000274286.1	-	protein_coding	KNOWN	ADRA2B	1	1	0.767152
chr2	96123850	96138436	96131143	ENSG00000188886.3	-	protein_coding	KNOWN	ASTL	2	9	0.871403
chr2	96143166	96145440	96144303	ENSG00000158050.4	-	protein_coding	KNOWN	DUSP2	2	4	0.947382
chr2	96145602	96147012	96146307	ENSG00000228873.1	-	lincRNA	KNOWN	AC012307.2	1	2	0.947382
chr2	96184859	96208825	96196842	ENSG00000084090.13	-	protein_coding	KNOWN	STARD7	6	8	0.476617
chr2	96208416	96242621	96225518	ENSG00000204685.6	+	processed_transcript	KNOWN	STARD7-AS1	3	3	0.576191
chr2	96248516	96265994	96257255	ENSG00000135956.8	-	protein_coding	KNOWN	TMEM127	3	4	0.761928
chr2	96266132	96273349	96269740	ENSG00000144021.2	+	protein_coding	KNOWN	CIAO1	4	7	0.805864
chr2	96274336	96305515	96289925	ENSG00000144028.14	-	protein_coding	KNOWN	SNRNP200	8	45	0.720991
chr2	96307263	96321731	96314497	ENSG00000230747.1	-	antisense	KNOWN	AC021188.4	1	2	0.528346
chr2	96325331	96330517	96327924	ENSG00000198885.9	+	protein_coding	KNOWN	ITPRIPL1	5	3	0.551988
chr2	96335787	96373845	96354816	ENSG00000121152.9	+	protein_coding	KNOWN	NCAPH	7	18	0.658531
chr2	96497643	96508109	96502876	ENSG00000163121.9	-	protein_coding	KNOWN	NEURL3	4	6	0.253743
chr2	96527940	96532306	96530123	ENSG00000235480.1	-	antisense	KNOWN	RP11-363D14.1	1	3	0.749012
chr2	96536743	96552638	96544690	ENSG00000196843.15	+	protein_coding	KNOWN	ARID5A	6	7	0.606149
chr2	96593170	96642787	96617978	ENSG00000114982.17	-	protein_coding	KNOWN	KANSL3	20	22	0.426126
chr2	96642737	96704887	96673812	ENSG00000249715.9	+	protein_coding	KNOWN	FER1L5	7	55	0.591592
chr2	96705929	96740064	96722996	ENSG00000114988.11	-	protein_coding	KNOWN	LMAN2L	9	9	0.533066
chr2	96760902	96811891	96786396	ENSG00000158158.11	+	protein_coding	KNOWN	CNNM4	4	7	0.744678
chr2	96798268	96798378	96798323	ENSG00000264157.2	+	miRNA	NOVEL	AC092636.1	1	1	0.574054
chr2	96809473	96809614	96809543	ENSG00000280510.1	+	miRNA	NOVEL	AC092636.2	1	1	0.574054
chr2	96812239	96813657	96812948	ENSG00000273265.1	-	lincRNA	KNOWN	RP11-353K11.1	1	2	0.671078
chr2	96816245	96833911	96825078	ENSG00000168763.15	+	protein_coding	KNOWN	CNNM3	5	8	0.680740
chr2	96824526	96857934	96841230	ENSG00000163126.14	-	protein_coding	KNOWN	ANKRD23	6	10	0.652414
chr2	96836611	96858095	96847353	ENSG00000213337.8	-	protein_coding	KNOWN	ANKRD39	2	9	0.627214
chr2	96859716	96870757	96865236	ENSG00000168758.10	-	protein_coding	KNOWN	SEMA4C	6	15	0.517163
chr2	96875882	96986592	96931237	ENSG00000168754.14	-	protein_coding	KNOWN	FAM178B	6	17	0.585699
chr2	96938923	96939203	96939063	ENSG00000274206.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.479508
chr2	96956708	96956815	96956761	ENSG00000252845.1	-	rRNA	KNOWN	RNA5SP101	1	1	0.427859
chr2	97000436	97001593	97001014	ENSG00000275094.1	-	unprocessed_pseudogene	KNOWN	RP11-219H23.1	1	2	0.401475
chr2	97008368	97009104	97008736	ENSG00000273634.1	-	processed_pseudogene	KNOWN	RP11-219H23.2	1	1	0.401475
chr2	97018343	97018604	97018473	ENSG00000248134.1	-	unprocessed_pseudogene	KNOWN	AC079395.1	1	1	-0.112022
chr2	97025981	97031636	97028808	ENSG00000144188.9	-	unprocessed_pseudogene	KNOWN	TRIM43CP	1	5	-0.214907
chr2	97034442	97034706	97034574	ENSG00000230343.1	+	unprocessed_pseudogene	KNOWN	AC018892.8	1	1	-0.467436
chr2	97035461	97037549	97036505	ENSG00000236847.1	-	unprocessed_pseudogene	KNOWN	AC018892.3	1	3	-0.467436
chr2	97046588	97046891	97046739	ENSG00000270748.1	+	IG_V_pseudogene	KNOWN	IGKV2OR2-1	1	1	-0.467436
chr2	97050729	97051028	97050878	ENSG00000271402.1	+	IG_V_pseudogene	KNOWN	IGKV2OR2-2	1	1	-0.115521
chr2	97060128	97060415	97060271	ENSG00000204670.7	+	IG_V_pseudogene	KNOWN	IGKV1OR2-3	1	1	-0.115521
chr2	97081098	97083249	97082173	ENSG00000188383.8	+	unprocessed_pseudogene	KNOWN	AC018892.9	1	5	-0.060743
chr2	97083583	97094882	97089232	ENSG00000144199.11	-	protein_coding	KNOWN	FAHD2B	6	9	0.176976
chr2	97094935	97097433	97096184	ENSG00000279791.1	+	TEC	KNOWN	RP11-499E14.1	1	1	0.489327
chr2	97100587	97100874	97100730	ENSG00000275655.1	+	misc_RNA	KNOWN	RN7SL313P	1	1	0.489327
chr2	97113496	97264521	97189008	ENSG00000135976.16	+	protein_coding	KNOWN	ANKRD36	6	76	-0.244114
chr2	97281904	97291780	97286842	ENSG00000277701.4	+	lincRNA	KNOWN	RP11-734K23.9	6	5	0.217902
chr2	97301729	97304151	97302940	ENSG00000237837.1	+	lincRNA	KNOWN	AC159540.3	1	2	0.051350
chr2	97322137	97322423	97322280	ENSG00000271351.1	-	IG_V_pseudogene	KNOWN	IGKV1OR2-9	1	1	-0.164348
chr2	97331533	97331843	97331688	ENSG00000276050.1	-	IG_V_pseudogene	KNOWN	IGKV2OR2-10	1	1	-0.096312
chr2	97335671	97335974	97335822	ENSG00000271015.1	-	IG_V_pseudogene	KNOWN	IGKV2OR2-7D	1	1	-0.096312
chr2	97348899	97349179	97349039	ENSG00000270252.1	+	IG_V_pseudogene	KNOWN	IGKV3OR2-5	1	1	-0.096312
chr2	97355059	97355335	97355197	ENSG00000271569.1	+	IG_V_pseudogene	KNOWN	IGKV1OR2-6	1	1	0.123356
chr2	97372532	97372835	97372683	ENSG00000270450.1	+	IG_V_pseudogene	KNOWN	IGKV2OR2-7	1	1	-0.166742
chr2	97376674	97376973	97376823	ENSG00000278537.1	+	IG_V_pseudogene	KNOWN	IGKV2OR2-8	1	1	-0.166742
chr2	97386082	97386368	97386225	ENSG00000270187.1	+	IG_V_pseudogene	KNOWN	IGKV1OR2-11	1	1	-0.166742
chr2	97416165	97433527	97424846	ENSG00000230606.10	-	lincRNA	KNOWN	AC159540.1	17	5	-0.061387
chr2	97421075	97434847	97427961	ENSG00000278766.2	+	lincRNA	KNOWN	AC159540.2	3	3	-0.008104
chr2	97492663	97589965	97541314	ENSG00000196912.12	-	protein_coding	KNOWN	ANKRD36B	8	45	-0.032855
chr2	97523949	97524976	97524462	ENSG00000235833.1	-	processed_pseudogene	KNOWN	AC159540.14	1	1	-0.273293
chr2	97636780	97637803	97637291	ENSG00000228970.6	-	unprocessed_pseudogene	KNOWN	UBTFL6	1	1	0.464363
chr2	97646040	97648383	97647211	ENSG00000135940.6	+	protein_coding	KNOWN	COX5B	4	5	0.464363
chr2	97655963	97664107	97660035	ENSG00000115073.7	-	protein_coding	KNOWN	ACTR1B	3	11	0.516797
chr2	97664217	97703064	97683640	ENSG00000228486.9	+	antisense	KNOWN	LINC01125	60	10	0.485503
chr2	97664591	97664731	97664661	ENSG00000201806.1	-	snRNA	KNOWN	RNU4-8P	1	1	0.516797
chr2	97713560	97739862	97726711	ENSG00000115085.13	+	protein_coding	KNOWN	ZAP70	8	14	0.619375
chr2	97756333	97995891	97876112	ENSG00000075568.16	-	protein_coding	KNOWN	TMEM131	9	41	0.017968
chr2	97827248	97827545	97827396	ENSG00000235734.4	+	processed_pseudogene	KNOWN	HMGN1P36	1	1	-0.072819
chr2	97913054	97913117	97913085	ENSG00000238719.1	-	snRNA	KNOWN	RNU7-96P	1	1	-0.191462
chr2	98087116	98313299	98200207	ENSG00000168658.18	+	protein_coding	KNOWN	VWA3B	21	29	-0.116257
chr2	98206151	98207724	98206937	ENSG00000231635.1	+	processed_pseudogene	KNOWN	ATP5BP1	1	1	-0.067075
chr2	98331389	98356005	98343697	ENSG00000222000.7	-	antisense	KNOWN	AC092675.3	3	4	0.129777
chr2	98346155	98398601	98372378	ENSG00000144191.11	+	protein_coding	KNOWN	CNGA3	5	8	0.277368
chr2	98346995	98351140	98349067	ENSG00000227987.1	+	sense_intronic	KNOWN	AC092675.4	1	2	0.128823
chr2	98444854	98594390	98519622	ENSG00000040933.15	+	protein_coding	KNOWN	INPP4A	10	26	0.351732
chr2	98599310	98608515	98603912	ENSG00000183513.8	-	protein_coding	KNOWN	COA5	5	3	0.191002
chr2	98608579	98618515	98613547	ENSG00000115446.11	+	protein_coding	KNOWN	UNC50	6	6	0.357518
chr2	98619106	98731126	98675116	ENSG00000071073.12	-	protein_coding	KNOWN	MGAT4A	9	16	-0.000225
chr2	98694109	98695490	98694799	ENSG00000236564.1	+	processed_pseudogene	KNOWN	YWHAQP5	1	1	-0.063659
chr2	98761938	98772920	98767429	ENSG00000226791.6	-	lincRNA	KNOWN	AC109826.1	5	6	-0.058176
chr2	98782410	98782548	98782479	ENSG00000201070.1	+	snRNA	KNOWN	RNU4-84P	1	1	0.107933
chr2	98793846	98936259	98865052	ENSG00000196872.10	-	protein_coding	KNOWN	KIAA1211L	8	11	0.087164
chr2	98840675	98840736	98840705	ENSG00000238830.1	-	snRNA	KNOWN	RNU7-46P	1	1	0.143654
chr2	98997261	99154964	99076112	ENSG00000135951.14	-	protein_coding	KNOWN	TSGA10	19	21	-0.381939
chr2	99102018	99102752	99102385	ENSG00000231822.1	+	processed_pseudogene	KNOWN	AC019097.7	1	1	-0.151677
chr2	99141485	99322741	99232113	ENSG00000241962.9	+	protein_coding	KNOWN	RP11-111H13.1	2	14	-0.053080
chr2	99141485	99151487	99146486	ENSG00000273045.5	+	protein_coding	KNOWN	C2orf15	3	5	-0.403485
chr2	99154955	99163157	99159056	ENSG00000144182.16	+	protein_coding	KNOWN	LIPT1	7	4	0.010378
chr2	99154998	99195298	99175148	ENSG00000273155.1	+	protein_coding	KNOWN	RP11-38C17.1	1	6	-0.021452
chr2	99161427	99181058	99171242	ENSG00000158411.10	-	protein_coding	KNOWN	MITD1	9	8	-0.023000
chr2	99181079	99197626	99189352	ENSG00000185414.19	+	protein_coding	KNOWN	MRPL30	5	6	-0.030067
chr2	99242246	99255282	99248764	ENSG00000185674.9	-	protein_coding	KNOWN	LYG2	6	6	-0.170983
chr2	99284238	99304742	99294490	ENSG00000144214.9	-	protein_coding	KNOWN	LYG1	2	8	-0.024395
chr2	99318982	99340702	99329842	ENSG00000115514.11	-	protein_coding	KNOWN	TXNDC9	9	5	0.321122
chr2	99337353	99401326	99369339	ENSG00000158417.10	+	protein_coding	KNOWN	EIF5B	5	25	0.036387
chr2	99400475	99490035	99445255	ENSG00000135945.9	-	protein_coding	KNOWN	REV1	16	23	0.080788
chr2	99405218	99405843	99405530	ENSG00000273306.1	+	antisense	KNOWN	RP11-527J8.1	1	1	-0.072395
chr2	99520103	99520232	99520167	ENSG00000222274.1	+	miRNA	NOVEL	AC018690.1	1	1	0.050651
chr2	99545419	100142739	99844079	ENSG00000144218.18	-	protein_coding	KNOWN	AFF3	15	25	0.061882
chr2	99601512	99601640	99601576	ENSG00000281739.1	-	miRNA	NOVEL	AC093373.1	1	1	0.381498
chr2	100104919	100107504	100106211	ENSG00000230393.1	+	antisense	KNOWN	AC092667.2	1	1	-0.049254
chr2	100208254	100251484	100229869	ENSG00000232084.5	+	lincRNA	KNOWN	LINC01104	2	3	0.147367
chr2	100273291	100322733	100298012	ENSG00000170500.12	-	protein_coding	KNOWN	LONRF2	2	12	-0.041051
chr2	100370255	100370545	100370400	ENSG00000269383.2	-	processed_pseudogene	KNOWN	RP11-292K15.2	1	1	-0.343224
chr2	100377421	100377532	100377476	ENSG00000270699.1	+	processed_pseudogene	KNOWN	RP11-292K15.1	1	1	-0.343224
chr2	100391860	100417656	100404758	ENSG00000115526.10	-	protein_coding	KNOWN	CHST10	12	7	0.219632
chr2	100425348	100426107	100425727	ENSG00000238029.1	+	processed_pseudogene	KNOWN	AC012493.1	1	1	0.191002
chr2	100470482	100483280	100476881	ENSG00000204640.1	+	protein_coding	KNOWN	NMS	1	10	-0.274791
chr2	100509277	100509612	100509444	ENSG00000204637.4	+	processed_pseudogene	KNOWN	AC068538.2	1	1	-0.257951
chr2	100562690	100576735	100569712	ENSG00000115539.13	+	protein_coding	KNOWN	PDCL3	3	6	0.082802
chr2	100591150	100591324	100591237	ENSG00000227259.2	-	processed_pseudogene	KNOWN	HMGN2P22	1	1	0.083771
chr2	100607028	100609358	100608193	ENSG00000234988.1	+	lincRNA	KNOWN	AC068538.4	2	2	0.083771
chr2	100660199	100660678	100660438	ENSG00000226034.2	+	processed_pseudogene	KNOWN	NANOGNBP1	1	1	0.222576
chr2	100669892	100676038	100672965	ENSG00000234169.1	-	lincRNA	KNOWN	AC092168.3	1	2	0.242910
chr2	100722221	100722882	100722551	ENSG00000228488.1	-	lincRNA	KNOWN	AC092168.4	1	2	0.200926
chr2	100820152	100996829	100908490	ENSG00000170485.16	+	protein_coding	KNOWN	NPAS2	12	21	0.300226
chr2	100822661	100847220	100834940	ENSG00000232034.1	+	sense_intronic	KNOWN	AC092168.2	1	3	0.131812
chr2	100972648	100977161	100974904	ENSG00000230140.5	-	antisense	KNOWN	AC016738.3	3	3	0.579856
chr2	100993676	101002244	100997960	ENSG00000223947.1	-	antisense	KNOWN	AC016738.4	1	2	0.167043
chr2	101001715	101024032	101012873	ENSG00000071082.10	+	protein_coding	KNOWN	RPL31	11	5	0.371213
chr2	101007617	101252866	101130241	ENSG00000204634.12	-	protein_coding	KNOWN	TBC1D8	10	20	0.102000
chr2	101023045	101023308	101023176	ENSG00000281681.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.491739
chr2	101068378	101068656	101068517	ENSG00000271532.1	+	processed_pseudogene	KNOWN	RP11-426K3.1	1	1	0.013136
chr2	101151660	101155412	101153536	ENSG00000272902.2	+	lincRNA	KNOWN	RP11-299H21.1	1	2	0.099448
chr2	101231916	101232049	101231982	ENSG00000280738.1	+	miRNA	NOVEL	AC013722.1	1	1	-0.052398
chr2	101252802	101270316	101261559	ENSG00000158435.7	+	protein_coding	KNOWN	CNOT11	3	7	0.060818
chr2	101271219	101308701	101289960	ENSG00000163162.8	-	protein_coding	KNOWN	RNF149	6	8	0.247051
chr2	101272936	101273049	101272992	ENSG00000212283.1	-	snoRNA	KNOWN	SNORD89	1	1	0.233238
chr2	101309450	101309534	101309492	ENSG00000264857.1	+	miRNA	KNOWN	MIR5696	1	1	0.260921
chr2	101345551	101387595	101366573	ENSG00000175874.9	-	protein_coding	KNOWN	CREG2	3	4	0.180426
chr2	101375587	101376055	101375821	ENSG00000226058.1	+	processed_pseudogene	KNOWN	AC092570.1	1	1	0.152428
chr2	101397361	101474703	101436032	ENSG00000196460.12	-	protein_coding	KNOWN	RFX8	4	14	0.397470
chr2	101479390	101486822	101483106	ENSG00000223826.1	+	lincRNA	KNOWN	AC092570.2	1	3	0.418802
chr2	101509530	101510222	101509876	ENSG00000237549.1	-	processed_pseudogene	KNOWN	AC092570.3	1	1	0.335310
chr2	101520834	101521976	101521405	ENSG00000232556.1	-	processed_pseudogene	KNOWN	AC092570.4	1	1	0.455539
chr2	101696850	101894689	101795769	ENSG00000071054.16	+	protein_coding	KNOWN	MAP4K4	21	31	0.172701
chr2	101962056	101987167	101974611	ENSG00000281162.2	+	lincRNA	KNOWN	LINC01127	5	3	0.201908
chr2	101991844	102028544	102010194	ENSG00000115590.13	+	protein_coding	KNOWN	IL1R2	9	9	0.172413
chr2	102064544	102179874	102122209	ENSG00000115594.11	+	protein_coding	KNOWN	IL1R1	13	12	0.159544
chr2	102172621	102182108	102177364	ENSG00000226925.1	-	antisense	KNOWN	AC007271.3	1	3	-0.204540
chr2	102186973	102240002	102213487	ENSG00000115598.9	+	protein_coding	KNOWN	IL1RL2	4	12	-0.123245
chr2	102249857	102250255	102250056	ENSG00000205716.4	-	processed_pseudogene	KNOWN	FAM183DP	1	1	0.007665
chr2	102311502	102352037	102331769	ENSG00000115602.16	+	protein_coding	KNOWN	IL1RL1	9	11	-0.260868
chr2	102311529	102398775	102355152	ENSG00000115604.10	+	protein_coding	KNOWN	IL18R1	5	12	-0.204682
chr2	102411243	102412108	102411675	ENSG00000236785.1	+	processed_pseudogene	KNOWN	SDR42E1P5	1	1	-0.514863
chr2	102418689	102452565	102435627	ENSG00000115607.9	+	protein_coding	KNOWN	IL18RAP	4	12	-0.293937
chr2	102432289	102432366	102432327	ENSG00000264764.1	+	miRNA	KNOWN	MIR4772	1	1	-0.145700
chr2	102433957	102435340	102434648	ENSG00000236525.1	+	sense_intronic	KNOWN	AC007278.2	1	2	-0.145700
chr2	102438713	102440475	102439594	ENSG00000234389.1	+	sense_intronic	KNOWN	AC007278.3	1	3	-0.145700
chr2	102473303	102533972	102503637	ENSG00000180251.4	+	protein_coding	KNOWN	SLC9A4	2	12	-0.282745
chr2	102619707	102711318	102665512	ENSG00000115616.2	+	protein_coding	KNOWN	SLC9A2	3	12	-0.179822
chr2	102715840	102736888	102726364	ENSG00000135953.10	-	protein_coding	KNOWN	MFSD9	8	7	-0.229493
chr2	102736908	102843893	102790400	ENSG00000170417.14	+	protein_coding	KNOWN	TMEM182	8	6	-0.259995
chr2	102873339	102895722	102884530	ENSG00000277527.1	-	lincRNA	KNOWN	AC007251.2	1	4	-0.432613
chr2	102967408	102984429	102975918	ENSG00000224095.1	-	lincRNA	KNOWN	AC108051.1	1	4	-0.256302
chr2	102987323	102988565	102987944	ENSG00000227680.1	+	lincRNA	KNOWN	AC108051.2	1	3	-0.229936
chr2	103011779	103019898	103015838	ENSG00000224850.1	+	lincRNA	KNOWN	AC108051.3	1	2	-0.412313
chr2	103109759	103176260	103143009	ENSG00000229209.1	-	lincRNA	KNOWN	AC073987.1	1	4	-0.454386
chr2	103275904	103276138	103276021	ENSG00000227623.1	+	processed_pseudogene	KNOWN	AC073987.2	1	1	-0.869534
chr2	103494241	103495842	103495041	ENSG00000236596.1	+	processed_pseudogene	KNOWN	AC092568.1	1	2	-0.713361
chr2	103527620	103529261	103528440	ENSG00000221849.2	+	processed_pseudogene	KNOWN	AC018880.1	1	2	-0.757868
chr2	103623630	103623830	103623730	ENSG00000231723.1	+	processed_pseudogene	KNOWN	AC018880.2	1	1	-1.132975
chr2	103856659	103880209	103868434	ENSG00000232597.5	-	lincRNA	KNOWN	AC013727.1	2	5	-0.378060
chr2	103865746	103869688	103867717	ENSG00000236141.1	-	lincRNA	KNOWN	AC013727.2	1	4	-0.396755
chr2	103874310	104077778	103976044	ENSG00000256637.6	+	lincRNA	KNOWN	RP11-76I14.1	5	4	-0.552508
chr2	103953098	103953284	103953191	ENSG00000273515.1	-	misc_RNA	NOVEL	DAOA-AS1_2	1	1	-0.658030
chr2	104125268	104147229	104136248	ENSG00000228968.1	-	lincRNA	KNOWN	AC096554.1	1	5	-0.473539
chr2	104395002	104396280	104395641	ENSG00000233955.1	-	processed_pseudogene	KNOWN	AHCYP3	1	1	-0.202191
chr2	104411201	104415612	104413406	ENSG00000227157.1	+	lincRNA	KNOWN	AC068535.2	1	2	-0.535282
chr2	104412227	104414008	104413117	ENSG00000225765.1	-	lincRNA	KNOWN	AC068535.3	1	2	-0.535282
chr2	104433267	104520832	104477049	ENSG00000235597.1	+	lincRNA	KNOWN	LINC01102	4	4	-0.327378
chr2	104488257	104488351	104488304	ENSG00000280979.1	-	miRNA	NOVEL	AC068535.1	1	1	-0.163005
chr2	104488458	104510509	104499483	ENSG00000234781.2	-	lincRNA	KNOWN	LINC01103	1	6	-0.313603
chr2	104532773	104532985	104532879	ENSG00000199727.2	+	snoRNA	NOVEL	U3	1	1	-0.351310
chr2	104568817	104568920	104568868	ENSG00000221654.1	-	miRNA	NOVEL	AC013402.1	1	1	-0.180693
chr2	104580821	104581890	104581355	ENSG00000231626.1	-	lincRNA	KNOWN	AC013402.4	1	2	-0.240852
chr2	104583152	104585354	104584253	ENSG00000236109.1	+	lincRNA	KNOWN	AC013402.3	1	2	-0.240852
chr2	104659337	104664837	104662087	ENSG00000230690.1	+	lincRNA	KNOWN	AC013402.5	1	4	-0.219048
chr2	104678223	104678673	104678448	ENSG00000225669.1	+	processed_pseudogene	KNOWN	RPL23AP27	1	1	-0.231898
chr2	104703758	104705509	104704633	ENSG00000228528.1	+	lincRNA	KNOWN	AC068057.1	1	2	-0.110501
chr2	104706612	104707506	104707059	ENSG00000279904.1	+	TEC	KNOWN	CTD-2015C24.1	1	1	-0.110501
chr2	104733234	104733362	104733298	ENSG00000207249.1	+	snoRNA	NOVEL	SNORA72	1	1	-0.198401
chr2	104746638	104757719	104752178	ENSG00000234177.5	-	lincRNA	KNOWN	LINC01114	3	4	-0.154655
chr2	104771282	104771885	104771583	ENSG00000213301.2	+	processed_pseudogene	KNOWN	HMGB3P11	1	1	-0.633001
chr2	104807572	104853183	104830377	ENSG00000233639.5	-	processed_transcript	KNOWN	LINC01158	5	4	-0.188937
chr2	104853285	104926052	104889668	ENSG00000269707.1	+	sense_overlapping	KNOWN	RP11-13J10.1	1	3	0.036936
chr2	104855511	104860471	104857991	ENSG00000198914.2	+	protein_coding	KNOWN	POU3F3	1	1	0.449544
chr2	104865407	104867496	104866451	ENSG00000239587.1	-	antisense	KNOWN	AC018730.4	1	4	0.449544
chr2	104865497	104872595	104869046	ENSG00000229743.2	-	processed_transcript	KNOWN	LINC01159	2	2	0.318774
chr2	104936241	105038496	104987368	ENSG00000224509.2	-	antisense	KNOWN	AC010884.1	1	3	-0.409473
chr2	104992902	104992980	104992941	ENSG00000263685.1	-	miRNA	NOVEL	AC010884.2	1	1	-0.299838
chr2	105037983	105099960	105068971	ENSG00000135972.8	+	protein_coding	KNOWN	MRPS9	3	11	-0.339185
chr2	105097052	105102944	105099998	ENSG00000231851.5	-	antisense	KNOWN	UTAT33	2	4	-0.381524
chr2	105144113	105145424	105144768	ENSG00000226508.1	+	lincRNA	KNOWN	AC104655.3	3	3	-0.039605
chr2	105241743	105243049	105242396	ENSG00000135973.2	+	protein_coding	KNOWN	GPR45	1	1	-0.029797
chr2	105249404	105249794	105249599	ENSG00000272861.1	-	lincRNA	KNOWN	RP11-332H14.1	1	1	-0.029797
chr2	105264391	105330034	105297212	ENSG00000135966.12	-	protein_coding	KNOWN	TGFBRAP1	3	12	0.130345
chr2	105279938	105280038	105279988	ENSG00000281871.1	+	miRNA	NOVEL	AC012360.1	1	1	0.285561
chr2	105324210	105330529	105327369	ENSG00000235319.1	+	lincRNA	KNOWN	AC012360.4	1	4	-0.097740
chr2	105334027	105337475	105335751	ENSG00000272994.1	-	lincRNA	KNOWN	RP11-332H14.2	1	1	0.060283
chr2	105337359	105349211	105343285	ENSG00000135974.9	+	protein_coding	KNOWN	C2orf49	2	5	0.060283
chr2	105357712	105438513	105398112	ENSG00000115641.18	-	protein_coding	KNOWN	FHL2	12	8	0.430190
chr2	105363038	105378839	105370938	ENSG00000238273.3	+	antisense	KNOWN	AC012360.6	2	4	0.254461
chr2	105744897	105894274	105819585	ENSG00000071051.13	+	protein_coding	KNOWN	NCK2	6	5	0.101805
chr2	105846534	105857177	105851855	ENSG00000235522.6	-	antisense	KNOWN	AC009505.2	6	5	0.083222
chr2	105959084	105962006	105960545	ENSG00000234162.1	-	lincRNA	KNOWN	AC009505.4	2	2	-0.044745
chr2	106063246	106078159	106070702	ENSG00000119147.9	+	protein_coding	KNOWN	C2orf40	6	5	-0.108945
chr2	106093303	106194339	106143821	ENSG00000115652.14	-	protein_coding	KNOWN	UXS1	15	15	0.054136
chr2	106179542	106183797	106181669	ENSG00000233339.1	+	antisense	KNOWN	AC018878.3	1	2	0.052892
chr2	106207394	106208115	106207754	ENSG00000273595.1	+	processed_pseudogene	KNOWN	RP11-707E21.1	1	1	0.395061
chr2	106247369	106247741	106247555	ENSG00000213295.3	+	processed_pseudogene	KNOWN	AC092106.2	1	1	-0.361374
chr2	106253231	106253717	106253474	ENSG00000224061.1	-	processed_pseudogene	KNOWN	AC092106.1	1	1	-0.315512
chr2	106288803	106289053	106288928	ENSG00000230353.5	-	processed_pseudogene	KNOWN	AC114755.2	1	1	0.144459
chr2	106304755	106305197	106304976	ENSG00000233939.1	+	processed_pseudogene	KNOWN	AC114755.4	1	1	-0.060907
chr2	106344566	106345433	106344999	ENSG00000227513.1	+	processed_pseudogene	KNOWN	AC114755.3	1	1	-0.244658
chr2	106368209	106368876	106368542	ENSG00000229682.1	-	processed_pseudogene	KNOWN	AC114755.5	1	2	-0.524680
chr2	106369724	106378247	106373985	ENSG00000235486.1	+	unprocessed_pseudogene	KNOWN	AC114755.7	1	6	-0.534358
chr2	106382171	106393031	106387601	ENSG00000240935.6	+	transcribed_unprocessed_pseudogene	KNOWN	PLGLA	3	5	-0.499486
chr2	106391290	106468376	106429833	ENSG00000153165.18	-	protein_coding	KNOWN	RGPD3	2	23	-0.271225
chr2	106470799	106477669	106474234	ENSG00000237666.2	-	unprocessed_pseudogene	KNOWN	AC108868.3	1	3	0.057844
chr2	106487427	106506940	106497183	ENSG00000254126.6	+	transcribed_unprocessed_pseudogene	KNOWN	CD8BP	2	6	0.201091
chr2	106521903	106538079	106529991	ENSG00000231505.1	-	lincRNA	KNOWN	AC108868.5	1	3	0.030037
chr2	106543014	106544297	106543655	ENSG00000232001.1	+	lincRNA	KNOWN	AC108868.6	1	2	-0.008535
chr2	106697331	106698676	106698003	ENSG00000214199.3	-	processed_pseudogene	KNOWN	EEF1A1P12	1	1	-0.489179
chr2	106801600	106887108	106844354	ENSG00000144057.15	-	protein_coding	KNOWN	ST6GAL2	5	6	-0.368299
chr2	106822923	106825031	106823977	ENSG00000238250.1	-	sense_intronic	KNOWN	ST6GAL2-IT1	1	2	-0.478097
chr2	106834464	106841207	106837835	ENSG00000227294.1	+	antisense	KNOWN	AC016994.2	1	2	-0.262117
chr2	106940880	106941482	106941181	ENSG00000229360.1	-	processed_pseudogene	KNOWN	PPP1R2P5	1	1	-0.344648
chr2	106963193	106963674	106963433	ENSG00000226905.1	+	processed_pseudogene	KNOWN	AC005040.3	1	1	-0.195811
chr2	107254691	107365873	107310282	ENSG00000229457.1	-	lincRNA	KNOWN	AC006227.1	2	6	-0.400590
chr2	107362282	107407329	107384805	ENSG00000225588.2	+	lincRNA	KNOWN	AC096669.1	3	4	-0.274283
chr2	107385632	107542649	107464140	ENSG00000237880.1	-	lincRNA	KNOWN	AC096669.2	1	5	-0.537142
chr2	107529487	107556326	107542906	ENSG00000224568.1	+	lincRNA	KNOWN	AC096669.3	2	3	-0.448086
chr2	107754112	107822129	107788120	ENSG00000232991.5	+	lincRNA	KNOWN	GACAT1	2	5	-0.518825
chr2	107823063	107826891	107824977	ENSG00000230651.7	-	lincRNA	KNOWN	RGPD4-AS1	6	3	-0.582238
chr2	107826937	107890841	107858889	ENSG00000196862.9	+	protein_coding	KNOWN	RGPD4	1	23	-0.427723
chr2	107902997	107903134	107903065	ENSG00000233494.1	-	processed_pseudogene	KNOWN	AC009963.3	1	1	-0.577860
chr2	107903964	107904241	107904102	ENSG00000227270.1	+	unprocessed_pseudogene	KNOWN	AC009963.4	1	2	-0.577860
chr2	107914948	107915286	107915117	ENSG00000237745.1	+	processed_pseudogene	KNOWN	AC009963.5	1	1	-0.314001
chr2	107920763	107921248	107921005	ENSG00000235325.1	-	processed_pseudogene	KNOWN	AC009963.6	1	1	-0.314001
chr2	107986523	108013994	108000258	ENSG00000115665.8	+	protein_coding	KNOWN	SLC5A7	2	9	-0.459609
chr2	108049200	108052755	108050977	ENSG00000231221.1	-	lincRNA	KNOWN	LINC01593	1	3	-0.538880
chr2	108099110	108099492	108099301	ENSG00000229890.1	+	processed_pseudogene	KNOWN	ACTP1	1	1	-0.492971
chr2	108167748	108217841	108192794	ENSG00000225328.1	-	antisense	KNOWN	LINC01594	1	5	-0.322283
chr2	108226015	108226331	108226173	ENSG00000236877.2	-	processed_pseudogene	KNOWN	SETD6P1	1	1	-0.172603
chr2	108247195	108265351	108256273	ENSG00000196228.3	+	protein_coding	KNOWN	SULT1C3	1	7	0.054491
chr2	108276812	108277942	108277377	ENSG00000227597.1	+	processed_pseudogene	KNOWN	WASF1P1	1	1	0.077041
chr2	108288639	108309915	108299277	ENSG00000198203.9	+	protein_coding	KNOWN	SULT1C2	9	9	0.323546
chr2	108317725	108318611	108318168	ENSG00000261209.1	+	unprocessed_pseudogene	KNOWN	SULT1C2P2	1	2	0.291025
chr2	108322238	108353799	108338018	ENSG00000237223.6	+	transcribed_unprocessed_pseudogene	KNOWN	SULT1C2P1	2	4	-0.001687
chr2	108367116	108367938	108367527	ENSG00000271070.1	+	processed_pseudogene	KNOWN	GMCL1P2	1	1	0.065997
chr2	108377911	108388057	108382984	ENSG00000198075.9	+	protein_coding	KNOWN	SULT1C4	3	7	-0.004761
chr2	108423612	108423885	108423748	ENSG00000271284.1	+	processed_pseudogene	KNOWN	SMIM12P1	1	1	0.091992
chr2	108448561	108509415	108478988	ENSG00000135968.19	+	protein_coding	KNOWN	GCC2	14	23	0.042374
chr2	108507515	108534196	108520855	ENSG00000214184.3	-	antisense	KNOWN	GCC2-AS1	2	3	-0.004731
chr2	108534355	108687246	108610800	ENSG00000169756.16	+	protein_coding	KNOWN	LIMS1	15	10	0.141160
chr2	108676795	108678601	108677698	ENSG00000228763.1	-	antisense	KNOWN	LIMS1-AS1	1	3	0.226641
chr2	108694750	108694893	108694821	ENSG00000233648.1	-	processed_pseudogene	KNOWN	AC010095.6	1	1	0.072626
chr2	108712262	108712900	108712581	ENSG00000235644.1	-	processed_pseudogene	KNOWN	RPL10P5	1	1	-0.018755
chr2	108719481	108785811	108752646	ENSG00000153201.15	+	protein_coding	KNOWN	RANBP2	5	29	-0.022905
chr2	108786757	108885477	108836117	ENSG00000163006.11	+	protein_coding	KNOWN	CCDC138	8	15	-0.056787
chr2	108878308	108878460	108878384	ENSG00000227470.1	+	processed_pseudogene	KNOWN	AC073415.2	1	1	-0.323046
chr2	108894471	108989372	108941921	ENSG00000135960.9	-	protein_coding	KNOWN	EDAR	3	12	0.102480
chr2	109124357	109124609	109124483	ENSG00000277628.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.067207
chr2	109127327	109128930	109128128	ENSG00000259863.1	-	lincRNA	KNOWN	SH3RF3-AS1	1	1	-0.067207
chr2	109129348	109504632	109316990	ENSG00000172985.10	+	protein_coding	KNOWN	SH3RF3	1	10	0.386769
chr2	109141490	109141588	109141539	ENSG00000264934.1	-	miRNA	KNOWN	MIR4265	1	1	0.041068
chr2	109251422	109251646	109251534	ENSG00000228551.1	+	processed_pseudogene	KNOWN	SNRPGP9	1	1	0.462511
chr2	109313571	109313625	109313598	ENSG00000265965.1	-	miRNA	KNOWN	MIR4266	1	1	0.077419
chr2	109344229	109344918	109344573	ENSG00000279515.1	-	protein_coding	KNOWN	AC109344.1	1	1	0.592146
chr2	109542982	109614206	109578594	ENSG00000186522.14	-	protein_coding	KNOWN	SEPT10	14	13	0.150348
chr2	109552536	109552846	109552691	ENSG00000237916.1	+	processed_pseudogene	KNOWN	RP11-537E18.1	1	1	0.260030
chr2	109594693	109605698	109600195	ENSG00000230696.1	-	sense_intronic	KNOWN	AC011753.5	1	2	-0.031391
chr2	109614334	109618990	109616662	ENSG00000198142.4	+	protein_coding	KNOWN	SOWAHC	1	1	0.296006
chr2	109665209	109665742	109665475	ENSG00000230603.1	+	processed_pseudogene	KNOWN	AC011753.6	1	2	0.001138
chr2	109667128	109668002	109667565	ENSG00000231099.1	+	processed_pseudogene	KNOWN	BMS1P19	1	2	0.001138
chr2	109732731	109733136	109732933	ENSG00000233307.1	+	processed_pseudogene	KNOWN	AC109815.2	1	1	0.022729
chr2	109737139	109737523	109737331	ENSG00000233707.3	-	processed_pseudogene	KNOWN	RPL22P11	1	1	0.022729
chr2	109758799	109760364	109759581	ENSG00000282033.1	-	lincRNA	KNOWN	RP11-506F3.1	1	2	0.077419
chr2	109792758	109857695	109825226	ENSG00000015568.12	+	protein_coding	KNOWN	RGPD5	13	23	0.026724
chr2	109898428	109924868	109911648	ENSG00000256977.10	+	protein_coding	KNOWN	LIMS3	6	10	0.286801
chr2	109933161	109985124	109959142	ENSG00000186148.11	+	processed_transcript	KNOWN	AC013271.3	8	6	0.277985
chr2	109984058	109984988	109984523	ENSG00000240069.1	+	transcribed_processed_pseudogene	KNOWN	GPAA1P1	1	1	0.212286
chr2	109986939	109988394	109987666	ENSG00000225108.1	-	processed_pseudogene	KNOWN	ZBTB45P1	1	1	0.212286
chr2	109987063	109996140	109991601	ENSG00000204588.5	+	lincRNA	KNOWN	LINC01123	2	4	0.450529
chr2	110007675	110010783	110009229	ENSG00000235721.1	+	processed_pseudogene	KNOWN	AC013268.3	1	2	0.380678
chr2	110012265	110012601	110012433	ENSG00000229730.2	-	processed_pseudogene	KNOWN	AC013268.4	1	1	-0.164022
chr2	110069961	110070042	110070001	ENSG00000265682.1	-	miRNA	KNOWN	MIR4267	1	1	0.460174
chr2	110083870	110116566	110100218	ENSG00000144063.3	-	protein_coding	KNOWN	MALL	3	5	0.300937
chr2	110086433	110086523	110086478	ENSG00000264979.1	-	miRNA	KNOWN	MIR4436B1	1	1	0.275156
chr2	110122311	110205066	110163688	ENSG00000144061.12	-	protein_coding	KNOWN	NPHP1	11	21	0.067562
chr2	110126732	110126824	110126778	ENSG00000212091.1	-	miRNA	NOVEL	AC013268.1	1	1	0.470942
chr2	110184054	110185179	110184616	ENSG00000233370.1	+	processed_pseudogene	KNOWN	AC092664.1	1	1	-0.247605
chr2	110211529	110245420	110228474	ENSG00000175701.10	-	protein_coding	KNOWN	LINC00116	3	9	-0.007299
chr2	110231106	110266559	110248832	ENSG00000261760.6	+	lincRNA	KNOWN	RP11-1223D19.1	4	6	0.047450
chr2	110245591	110285856	110265723	ENSG00000282304.1	+	processed_transcript	KNOWN	RP11-1223D19.3	3	5	0.143594
chr2	110279606	110285681	110282643	ENSG00000282785.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-1223D19.2	1	3	0.120703
chr2	110284853	110284943	110284898	ENSG00000263881.1	+	miRNA	KNOWN	MIR4436B2	1	1	0.120703
chr2	110301312	110301393	110301352	ENSG00000264336.1	+	miRNA	NOVEL	AC140479.1	1	1	0.237948
chr2	110358790	110359126	110358958	ENSG00000226991.2	+	processed_pseudogene	KNOWN	AC112229.6	1	1	0.287387
chr2	110360608	110363737	110362172	ENSG00000230650.1	-	processed_pseudogene	KNOWN	AC112229.1	1	1	0.287387
chr2	110375138	110384442	110379790	ENSG00000175772.10	-	lincRNA	KNOWN	LINC01106	2	3	0.467630
chr2	110383112	110384642	110383877	ENSG00000226065.1	+	processed_pseudogene	KNOWN	ZBTB45P2	1	1	0.467630
chr2	110386377	110388163	110387270	ENSG00000230596.2	-	transcribed_processed_pseudogene	KNOWN	GPAA1P2	2	1	0.467630
chr2	110386411	110433673	110410042	ENSG00000273471.1	-	processed_transcript	KNOWN	RP13-1039J1.4	1	4	0.243074
chr2	110402914	110435166	110419040	ENSG00000184115.16	-	lincRNA	KNOWN	RP13-1039J1.2	6	6	0.065553
chr2	110402934	110473075	110438004	ENSG00000257207.5	-	protein_coding	KNOWN	AC108938.5	1	18	0.195359
chr2	110446640	110473075	110459857	ENSG00000256671.6	-	protein_coding	KNOWN	LIMS3L	5	10	0.421004
chr2	110449242	110451064	110450153	ENSG00000227574.2	+	antisense	KNOWN	RP13-1039J1.3	1	3	0.306003
chr2	110500100	110500235	110500167	ENSG00000231583.1	+	unprocessed_pseudogene	KNOWN	AC108938.3	1	1	0.028177
chr2	110513812	110577185	110545498	ENSG00000183054.11	-	protein_coding	KNOWN	RGPD6	11	23	-0.071543
chr2	110610916	110612404	110611660	ENSG00000231536.1	+	antisense	KNOWN	AC123886.2	1	2	-0.093422
chr2	110633947	110634333	110634140	ENSG00000216867.2	+	processed_pseudogene	KNOWN	AC114776.1	1	1	-0.109266
chr2	110637698	110678114	110657906	ENSG00000169679.14	-	protein_coding	KNOWN	BUB1	12	25	-0.132769
chr2	110709575	110716595	110713085	ENSG00000235881.2	-	lincRNA	KNOWN	AC114776.3	1	2	-0.368466
chr2	110732573	111118222	110925397	ENSG00000153093.18	+	protein_coding	KNOWN	ACOXL	10	19	-0.156062
chr2	110967834	110968719	110968276	ENSG00000236330.1	+	processed_pseudogene	KNOWN	RPL5P9	1	1	0.008576
chr2	111098345	111115588	111106966	ENSG00000204581.2	-	antisense	KNOWN	AC096670.3	2	3	-0.148377
chr2	111119378	111168447	111143912	ENSG00000153094.21	+	protein_coding	KNOWN	BCL2L11	23	6	-0.095085
chr2	111195963	111206494	111201228	ENSG00000230499.1	+	lincRNA	KNOWN	AC108463.1	1	2	0.269779
chr2	111196350	111495100	111345725	ENSG00000172965.14	-	lincRNA	KNOWN	MIR4435-2HG	20	6	0.214175
chr2	111203964	111206215	111205089	ENSG00000227992.1	-	processed_pseudogene	KNOWN	AC108463.2	1	2	0.269779
chr2	111210995	111212476	111211735	ENSG00000271590.1	-	lincRNA	KNOWN	RP11-181E10.3	1	1	0.099811
chr2	111265283	111279880	111272581	ENSG00000229118.1	+	lincRNA	KNOWN	AC068491.2	1	2	0.196068
chr2	111266868	111267473	111267170	ENSG00000270190.1	-	lincRNA	KNOWN	RP11-803D5.4	1	1	-0.107042
chr2	111295629	111296046	111295837	ENSG00000226928.1	-	processed_pseudogene	KNOWN	RPS14P4	1	1	0.187961
chr2	111321012	111321091	111321051	ENSG00000266139.1	-	miRNA	KNOWN	MIR4435-2	1	1	0.419796
chr2	111321433	111324812	111323122	ENSG00000279191.1	-	TEC	KNOWN	RP11-803D5.1	1	1	0.419796
chr2	111383752	111384992	111384372	ENSG00000223973.2	+	transcribed_processed_pseudogene	KNOWN	AC068491.3	2	1	0.163011
chr2	111468810	111637967	111553388	ENSG00000280878.1	+	lincRNA	KNOWN	RP11-68E19.2	1	2	0.329064
chr2	111491273	111570974	111531123	ENSG00000240350.2	+	lincRNA	KNOWN	AC017002.1	2	3	0.409845
chr2	111491943	111494811	111493377	ENSG00000224959.1	-	lincRNA	KNOWN	AC017002.2	1	2	0.588516
chr2	111558413	111559937	111559175	ENSG00000271635.1	-	processed_pseudogene	KNOWN	RP11-68E19.1	1	1	0.244801
chr2	111607841	111612518	111610179	ENSG00000225744.1	+	lincRNA	KNOWN	AC017002.4	1	2	0.187394
chr2	111675026	111675343	111675184	ENSG00000237583.1	+	processed_pseudogene	KNOWN	AC093166.1	1	1	0.131340
chr2	111717508	111717837	111717672	ENSG00000227842.1	+	processed_pseudogene	KNOWN	AC093166.2	1	1	0.412359
chr2	111742586	111744662	111743624	ENSG00000228615.1	+	processed_pseudogene	KNOWN	AC093166.3	1	3	0.347647
chr2	111766271	111884690	111825480	ENSG00000153107.11	-	protein_coding	KNOWN	ANAPC1	10	48	-0.154603
chr2	111771061	111771134	111771097	ENSG00000266063.1	-	miRNA	KNOWN	MIR4771-2	1	1	-0.032899
chr2	111865798	111866405	111866101	ENSG00000230958.1	+	processed_pseudogene	KNOWN	AC093166.4	1	2	0.013989
chr2	111887914	111888741	111888327	ENSG00000236307.2	+	processed_pseudogene	KNOWN	EEF1E1P1	1	2	0.005056
chr2	111898479	112029561	111964020	ENSG00000153208.16	+	protein_coding	KNOWN	MERTK	7	40	0.076017
chr2	111930175	111930467	111930321	ENSG00000240183.3	+	misc_RNA	KNOWN	RN7SL297P	1	1	0.281334
chr2	111940302	111941036	111940669	ENSG00000225496.1	-	processed_pseudogene	KNOWN	AC104651.2	1	1	0.281334
chr2	111952144	111952671	111952407	ENSG00000232277.1	-	processed_pseudogene	KNOWN	AC104651.3	1	1	-0.105739
chr2	112055223	112119318	112087270	ENSG00000153214.9	+	protein_coding	KNOWN	TMEM87B	5	19	0.090963
chr2	112138385	112188216	112163300	ENSG00000144152.12	+	protein_coding	KNOWN	FBLN7	7	8	0.329013
chr2	112188364	112190635	112189499	ENSG00000278962.1	+	TEC	KNOWN	RP11-399B17.1	1	1	0.164158
chr2	112211525	112255136	112233330	ENSG00000144161.12	-	protein_coding	KNOWN	ZC3H8	8	10	-0.078397
chr2	112275594	112340063	112307828	ENSG00000188177.13	+	protein_coding	KNOWN	ZC3H6	4	12	-0.097678
chr2	112286057	112286422	112286239	ENSG00000235258.1	-	processed_pseudogene	KNOWN	AC115115.3	1	1	-0.061814
chr2	112346011	112346258	112346134	ENSG00000236555.1	+	processed_pseudogene	KNOWN	AC115115.4	1	1	0.171426
chr2	112370092	112434488	112402290	ENSG00000169629.11	-	protein_coding	KNOWN	RGPD8	7	23	0.105451
chr2	112482154	112541739	112511946	ENSG00000114999.7	+	protein_coding	KNOWN	TTL	4	7	0.354769
chr2	112541915	112577150	112559532	ENSG00000125630.15	+	protein_coding	KNOWN	POLR1B	17	16	0.188433
chr2	112579484	112579584	112579534	ENSG00000207383.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.430794
chr2	112584240	112589275	112586757	ENSG00000125611.15	+	protein_coding	KNOWN	CHCHD5	5	4	0.430794
chr2	112589040	112614431	112601735	ENSG00000243389.1	+	3prime_overlapping_ncrna	KNOWN	AC012442.5	1	2	0.241950
chr2	112590796	112591939	112591367	ENSG00000228251.1	+	lincRNA	KNOWN	AC012442.6	1	2	0.261011
chr2	112621809	112622167	112621988	ENSG00000231747.1	-	processed_pseudogene	KNOWN	AC079922.2	1	1	0.115075
chr2	112641832	112645690	112643761	ENSG00000237753.1	-	lincRNA	KNOWN	AC079922.3	1	5	0.404968
chr2	112645857	112663827	112654842	ENSG00000144136.10	+	protein_coding	KNOWN	SLC20A1	9	11	0.322996
chr2	112721486	112742879	112732182	ENSG00000144130.11	+	protein_coding	KNOWN	NT5DC4	6	17	0.492458
chr2	112736607	112764677	112750642	ENSG00000169607.12	-	protein_coding	KNOWN	CKAP2L	6	10	0.211595
chr2	112773915	112784590	112779252	ENSG00000115008.5	-	protein_coding	KNOWN	IL1A	1	7	0.247270
chr2	112829751	112836903	112833327	ENSG00000125538.11	-	protein_coding	KNOWN	IL1B	8	7	0.148676
chr2	112840328	112844195	112842261	ENSG00000280228.1	+	TEC	KNOWN	RP11-67L14.1	1	1	0.148575
chr2	112844311	112844411	112844361	ENSG00000221541.1	+	miRNA	NOVEL	AC079753.1	1	1	0.148575
chr2	112853328	112854122	112853725	ENSG00000180152.3	+	processed_pseudogene	KNOWN	AC079753.4	1	1	-0.066706
chr2	112912971	112918882	112915926	ENSG00000125571.9	+	protein_coding	KNOWN	IL37	5	5	0.426109
chr2	112932625	112933171	112932898	ENSG00000227368.1	+	processed_pseudogene	KNOWN	AC079753.5	1	1	0.199476
chr2	112973203	112985665	112979434	ENSG00000136688.10	+	protein_coding	KNOWN	IL36G	3	5	0.134636
chr2	112981166	112981434	112981300	ENSG00000236124.1	-	processed_pseudogene	KNOWN	HMGN2P23	1	1	0.134636
chr2	112995517	112995937	112995727	ENSG00000232090.2	+	processed_pseudogene	KNOWN	AC016724.6	1	1	-0.217177
chr2	113005461	113008044	113006752	ENSG00000136694.8	+	protein_coding	KNOWN	IL36A	1	4	-0.217177
chr2	113022091	113052867	113037479	ENSG00000136696.10	-	protein_coding	KNOWN	IL36B	2	6	-0.108198
chr2	113058638	113065382	113062010	ENSG00000136695.14	+	protein_coding	KNOWN	IL36RN	4	5	-0.036165
chr2	113067970	113075850	113071910	ENSG00000136697.12	+	protein_coding	KNOWN	IL1F10	3	5	0.164444
chr2	113086805	113086911	113086858	ENSG00000201805.1	+	snRNA	KNOWN	RNU6-1180P	1	1	0.234011
chr2	113107214	113134016	113120615	ENSG00000136689.18	+	protein_coding	KNOWN	IL1RN	9	9	0.182216
chr2	113157325	113209396	113183360	ENSG00000125637.15	+	protein_coding	KNOWN	PSD4	12	17	0.368173
chr2	113171535	113175360	113173447	ENSG00000234174.1	-	antisense	KNOWN	AC016683.5	2	2	0.376088
chr2	113211522	113276581	113244051	ENSG00000189223.13	+	processed_transcript	KNOWN	PAX8-AS1	19	6	0.440781
chr2	113215997	113278950	113247473	ENSG00000125618.16	-	protein_coding	KNOWN	PAX8	13	12	0.441469
chr2	113237595	113240825	113239210	ENSG00000274877.1	+	antisense	KNOWN	RP11-65I12.1	1	1	0.378749
chr2	113406396	113406872	113406634	ENSG00000231292.6	+	IG_V_gene	KNOWN	IGKV1OR2-108	1	2	0.366852
chr2	113424495	113425324	113424909	ENSG00000234997.1	+	antisense	KNOWN	AC016745.3	1	2	-0.122906
chr2	113432600	113436042	113434321	ENSG00000272563.1	+	lincRNA	KNOWN	RP11-480C16.1	1	1	-0.232908
chr2	113437691	113496189	113466940	ENSG00000136682.14	+	protein_coding	KNOWN	CBWD2	11	16	-0.344710
chr2	113498665	113501155	113499910	ENSG00000184492.6	+	protein_coding	KNOWN	FOXD4L1	1	1	-0.475816
chr2	113512463	113515485	113513974	ENSG00000234148.2	+	lincRNA	KNOWN	RP11-395L14.3	1	3	0.228128
chr2	113527568	113542672	113535120	ENSG00000231943.7	-	lincRNA	KNOWN	PGM5P4-AS1	4	4	0.030388
chr2	113541937	113563298	113552617	ENSG00000225398.3	+	unprocessed_pseudogene	KNOWN	PGM5P4	1	2	0.075761
chr2	113577382	113578852	113578117	ENSG00000226516.7	+	lincRNA	KNOWN	FAM138B	2	3	0.196861
chr2	113582959	113583096	113583027	ENSG00000221055.1	-	miRNA	KNOWN	MIR1302-3	1	1	0.196861
chr2	113588550	113599043	113593796	ENSG00000146556.14	+	transcribed_unprocessed_pseudogene	KNOWN	WASH2P	2	10	0.553492
chr2	113596000	113596067	113596033	ENSG00000276624.1	+	miRNA	NOVEL	AL078621.1	1	1	0.610630
chr2	113599036	113601261	113600148	ENSG00000236397.3	-	unprocessed_pseudogene	KNOWN	DDX11L2	1	4	0.610630
chr2	113605867	113607908	113606887	ENSG00000279267.1	-	TEC	KNOWN	RP11-395L14.18	1	1	0.610630
chr2	113610502	113627090	113618796	ENSG00000240356.6	-	transcribed_processed_pseudogene	KNOWN	RPL23AP7	3	3	0.365246
chr2	113627229	113643396	113635312	ENSG00000144134.18	+	protein_coding	KNOWN	RABL2A	18	10	0.513791
chr2	113657908	113658675	113658291	ENSG00000144158.4	+	processed_pseudogene	KNOWN	RP11-395L14.17	1	1	-0.025845
chr2	113667478	113668621	113668049	ENSG00000175509.8	-	processed_pseudogene	KNOWN	RP11-395L14.13	1	2	-0.025845
chr2	113669166	113673191	113671178	ENSG00000233479.1	+	lincRNA	KNOWN	AC017074.1	1	4	0.138034
chr2	113677702	113704078	113690890	ENSG00000227359.1	-	lincRNA	KNOWN	AC017074.2	1	3	-0.078792
chr2	113681111	113681217	113681164	ENSG00000202427.1	+	snRNA	KNOWN	RNU6-744P	1	1	0.180801
chr2	113705011	113756823	113730917	ENSG00000115084.12	-	protein_coding	KNOWN	SLC35F5	12	17	-0.084198
chr2	113721272	113721379	113721325	ENSG00000265429.2	-	miRNA	NOVEL	AC017074.3	1	1	0.100166
chr2	113829390	113831119	113830254	ENSG00000244063.1	-	lincRNA	KNOWN	AC024704.2	1	2	0.197761
chr2	113831049	113843356	113837202	ENSG00000228857.2	-	lincRNA	KNOWN	AC104653.1	2	3	0.154053
chr2	113888203	113889750	113888976	ENSG00000270019.1	-	lincRNA	KNOWN	RP11-141B14.1	1	1	0.115324
chr2	113889960	113962596	113926278	ENSG00000115091.11	+	protein_coding	KNOWN	ACTR3	8	12	0.164497
chr2	113904086	113905258	113904672	ENSG00000279957.1	+	TEC	KNOWN	RP11-141B14.2	1	1	0.201815
chr2	113979569	114007302	113993435	ENSG00000234199.2	+	lincRNA	KNOWN	LINC01191	1	2	-0.216922
chr2	113979909	113983258	113981583	ENSG00000243179.1	+	lincRNA	KNOWN	AC110769.3	1	2	-0.139014
chr2	113990010	113990096	113990053	ENSG00000215984.1	-	miRNA	NOVEL	AC110769.1	1	1	-0.263884
chr2	114005440	114005655	114005547	ENSG00000212182.2	-	snoRNA	NOVEL	U3	1	1	-0.263884
chr2	114122274	114123293	114122783	ENSG00000235242.1	-	lincRNA	KNOWN	AC010982.2	1	2	-0.492971
chr2	114260050	114261226	114260638	ENSG00000231926.1	-	processed_pseudogene	KNOWN	SEPHS1P7	1	1	-0.715363
chr2	114420125	114420302	114420213	ENSG00000222923.1	+	snRNA	KNOWN	RNU2-41P	1	1	-0.142964
chr2	114442299	115845752	115144025	ENSG00000175497.16	+	protein_coding	KNOWN	DPP10	13	27	-0.517998
chr2	114497253	114497396	114497324	ENSG00000280854.1	+	sRNA	NOVEL	Clostridiales-1	1	1	-0.589326
chr2	114828432	114833548	114830990	ENSG00000231538.1	-	antisense	KNOWN	DPP10-AS3	1	2	-0.232512
chr2	114833830	114835588	114834709	ENSG00000235717.1	-	antisense	KNOWN	DPP10-AS2	1	2	-0.191402
chr2	115130935	115161343	115146139	ENSG00000235026.5	-	antisense	KNOWN	DPP10-AS1	2	5	-0.357236
chr2	115468056	115468938	115468497	ENSG00000230391.1	+	processed_pseudogene	KNOWN	RPSAP23	1	1	-0.565483
chr2	116687218	116687387	116687302	ENSG00000271667.1	-	processed_pseudogene	KNOWN	RP11-338I24.1	1	1	-0.492971
chr2	116726453	116726771	116726612	ENSG00000224869.1	-	processed_pseudogene	KNOWN	AC062016.1	1	1	-0.653435
chr2	116751158	116751648	116751403	ENSG00000226341.1	+	processed_pseudogene	KNOWN	AC062016.2	1	1	-0.554000
chr2	116818086	116818761	116818423	ENSG00000235871.1	+	processed_pseudogene	KNOWN	AC062016.3	1	1	-0.461607
chr2	117023918	117024867	117024392	ENSG00000230158.1	+	unprocessed_pseudogene	KNOWN	MTND1P28	1	1	-0.367440
chr2	117025077	117026118	117025597	ENSG00000230950.1	+	unprocessed_pseudogene	KNOWN	MTND2P21	1	1	-0.367440
chr2	117026331	117026396	117026363	ENSG00000274027.1	+	miRNA	NOVEL	AC012365.1	1	1	-0.367440
chr2	117026537	117027024	117026780	ENSG00000228898.1	+	unprocessed_pseudogene	KNOWN	MTCO1P43	1	1	-0.367440
chr2	117139715	117139775	117139745	ENSG00000239185.1	-	snRNA	KNOWN	RNU7-190P	1	1	-0.284863
chr2	117180892	117181562	117181227	ENSG00000227291.1	-	processed_pseudogene	KNOWN	AC092170.1	1	2	-0.339058
chr2	117757563	117804174	117780868	ENSG00000238207.1	-	antisense	KNOWN	AC009312.1	1	4	-0.172509
chr2	117814650	117832379	117823514	ENSG00000088205.12	+	protein_coding	KNOWN	DDX18	6	14	-0.233920
chr2	117833937	117841658	117837797	ENSG00000236255.1	+	lincRNA	KNOWN	AC009404.2	3	3	-0.077933
chr2	117859427	117934942	117897184	ENSG00000125631.7	+	transcribed_unprocessed_pseudogene	KNOWN	HTR5BP	2	8	0.049890
chr2	117915478	118014133	117964805	ENSG00000125633.10	-	protein_coding	KNOWN	CCDC93	9	24	0.132507
chr2	117934025	117934789	117934407	ENSG00000224967.1	-	processed_pseudogene	KNOWN	AC009303.3	1	2	0.181973
chr2	117995397	118055033	118025215	ENSG00000235066.6	+	antisense	KNOWN	AC009303.1	12	6	-0.027879
chr2	117998745	117999480	117999112	ENSG00000272895.1	+	antisense	KNOWN	RP11-98C1.2	1	1	-0.155936
chr2	118014174	118015673	118014923	ENSG00000279227.1	+	TEC	KNOWN	AC009303.2	1	1	0.243198
chr2	118016385	118016669	118016527	ENSG00000243510.3	+	misc_RNA	KNOWN	RN7SL111P	1	1	0.243198
chr2	118088452	118110997	118099724	ENSG00000125629.14	+	protein_coding	KNOWN	INSIG2	8	6	0.059489
chr2	118132128	118186386	118159257	ENSG00000226856.5	-	lincRNA	KNOWN	AC093901.1	3	4	-0.222339
chr2	118833700	118835110	118834405	ENSG00000258910.2	-	lincRNA	KNOWN	RP11-19E11.1	2	3	0.004529
chr2	118842171	118847678	118844924	ENSG00000163064.6	-	protein_coding	KNOWN	EN1	2	2	0.004529
chr2	118942166	118994660	118968413	ENSG00000019169.10	+	protein_coding	KNOWN	MARCO	3	17	-0.273568
chr2	118949306	118952983	118951144	ENSG00000259094.1	-	antisense	KNOWN	RP11-77A13.1	1	2	-0.345100
chr2	119156243	119158889	119157566	ENSG00000144119.3	-	protein_coding	KNOWN	C1QL2	1	2	0.084214
chr2	119169822	119170115	119169968	ENSG00000264833.1	+	misc_RNA	KNOWN	RN7SL468P	1	1	0.050628
chr2	119223831	119265652	119244741	ENSG00000115107.19	+	protein_coding	KNOWN	STEAP3	4	6	0.389767
chr2	119244422	119249071	119246746	ENSG00000229867.1	-	antisense	KNOWN	STEAP3-AS1	1	2	0.333000
chr2	119302225	119366828	119334526	ENSG00000186132.14	-	protein_coding	KNOWN	C2orf76	6	7	-0.255978
chr2	119366921	119372560	119369740	ENSG00000155368.16	+	protein_coding	KNOWN	DBI	12	5	-0.208554
chr2	119429901	119438520	119434210	ENSG00000171227.6	+	protein_coding	KNOWN	TMEM37	4	2	0.142195
chr2	119439843	119525301	119482572	ENSG00000080293.9	-	protein_coding	KNOWN	SCTR	5	13	-0.026951
chr2	119476448	119487346	119481897	ENSG00000231013.1	+	antisense	KNOWN	AC013275.2	2	3	0.127441
chr2	119544432	119662251	119603341	ENSG00000163075.12	+	protein_coding	KNOWN	CFAP221	17	25	-0.255507
chr2	119679167	119686507	119682837	ENSG00000144120.12	+	protein_coding	KNOWN	TMEM177	6	3	0.341351
chr2	119698623	119700151	119699387	ENSG00000229326.3	+	processed_pseudogene	KNOWN	AC069154.4	1	3	0.337104
chr2	119759631	119983818	119871724	ENSG00000088179.8	+	protein_coding	KNOWN	PTPN4	12	27	-0.220676
chr2	119993199	119993611	119993405	ENSG00000233741.1	-	processed_pseudogene	KNOWN	AC016691.2	1	1	-0.637361
chr2	120013005	120179119	120096062	ENSG00000115109.13	+	protein_coding	KNOWN	EPB41L5	10	25	-0.253841
chr2	120174885	120216544	120195714	ENSG00000224789.1	-	antisense	KNOWN	AC012363.4	1	3	-0.079585
chr2	120192245	120192357	120192301	ENSG00000202046.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.100653
chr2	120196062	120196141	120196101	ENSG00000275077.1	+	miRNA	NOVEL	AC012363.1	1	1	-0.100653
chr2	120211054	120211715	120211384	ENSG00000236878.1	+	processed_pseudogene	KNOWN	AC012363.7	1	1	0.246438
chr2	120211727	120212862	120212294	ENSG00000227788.1	+	processed_pseudogene	KNOWN	AC012363.8	1	2	0.246438
chr2	120212935	120213275	120213105	ENSG00000233286.1	+	processed_pseudogene	KNOWN	MTND3P10	1	1	0.246438
chr2	120213344	120213631	120213487	ENSG00000243104.1	+	processed_pseudogene	KNOWN	MTND4LP14	1	1	0.246438
chr2	120213631	120214989	120214310	ENSG00000234065.2	+	processed_pseudogene	KNOWN	MTND4P26	1	1	0.246438
chr2	120215181	120217279	120216230	ENSG00000223549.1	+	processed_pseudogene	KNOWN	MTND5P28	1	3	0.246438
chr2	120221278	120223408	120222343	ENSG00000226479.3	-	protein_coding	KNOWN	TMEM185B	1	1	0.246438
chr2	120240064	120294713	120267388	ENSG00000144118.13	+	protein_coding	KNOWN	RALB	8	6	0.282041
chr2	120290710	120291049	120290879	ENSG00000281676.1	-	protein_coding	KNOWN	AC012363.2	1	2	0.023820
chr2	120319007	120326298	120322652	ENSG00000235840.1	+	lincRNA	KNOWN	AC012363.13	1	3	0.726707
chr2	120346143	120351808	120348975	ENSG00000163083.5	+	protein_coding	KNOWN	INHBB	1	2	0.538485
chr2	120464335	120466218	120465276	ENSG00000280409.1	-	TEC	KNOWN	LINC01101	1	1	0.697972
chr2	120542909	120544326	120543617	ENSG00000237614.1	-	lincRNA	KNOWN	AC073257.2	1	2	0.520640
chr2	120553743	120558109	120555926	ENSG00000232140.1	-	lincRNA	KNOWN	AC073257.1	1	3	0.171991
chr2	120651273	120651374	120651323	ENSG00000201006.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.403700
chr2	120686635	120710517	120698576	ENSG00000229774.1	-	lincRNA	KNOWN	AC018866.1	2	2	0.683001
chr2	120735623	120992653	120864138	ENSG00000074047.20	+	protein_coding	KNOWN	GLI2	14	14	0.568795
chr2	120866378	120867403	120866890	ENSG00000271709.1	-	lincRNA	KNOWN	RP11-297J22.1	1	2	0.625729
chr2	121035073	121035218	121035145	ENSG00000221321.1	+	miRNA	NOVEL	AC016764.1	1	1	0.106865
chr2	121040610	121040710	121040660	ENSG00000201584.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.106865
chr2	121081437	121088726	121085081	ENSG00000234455.1	-	lincRNA	KNOWN	AC067960.1	1	2	0.538393
chr2	121178327	121182580	121180453	ENSG00000236145.1	+	lincRNA	KNOWN	AC079988.3	1	2	0.286903
chr2	121216587	121285207	121250897	ENSG00000115112.7	-	protein_coding	KNOWN	TFCP2L1	2	15	0.166600
chr2	121309995	121310412	121310203	ENSG00000232723.1	+	processed_pseudogene	KNOWN	AC013399.3	1	1	0.032118
chr2	121337776	121649587	121493681	ENSG00000074054.17	-	protein_coding	KNOWN	CLASP1	15	40	0.161721
chr2	121530422	121532705	121531563	ENSG00000265451.1	+	antisense	KNOWN	RP11-204L24.2	1	2	0.273057
chr2	121530881	121531007	121530944	ENSG00000264229.1	+	snRNA	KNOWN	RNU4ATAC	1	1	0.273057
chr2	121603073	121603164	121603118	ENSG00000222467.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.766080
chr2	121649650	121728481	121689065	ENSG00000236859.6	+	antisense	KNOWN	NIFK-AS1	5	4	0.299844
chr2	121658475	121658973	121658724	ENSG00000230993.1	-	processed_pseudogene	KNOWN	RPL12P15	1	1	0.433500
chr2	121688203	121689714	121688958	ENSG00000279721.1	+	TEC	KNOWN	RP11-416H1.2	1	1	0.149873
chr2	121708512	121709115	121708813	ENSG00000213239.3	-	processed_pseudogene	KNOWN	NPM1P32	1	1	0.298443
chr2	121726945	121736923	121731934	ENSG00000155438.11	-	protein_coding	KNOWN	NIFK	7	7	0.338032
chr2	121737103	121767853	121752478	ENSG00000211460.11	+	protein_coding	KNOWN	TSN	12	6	0.081412
chr2	121743479	121745921	121744700	ENSG00000270798.1	-	processed_pseudogene	KNOWN	RP11-416H1.1	1	2	0.347937
chr2	121761827	121761935	121761881	ENSG00000274151.1	-	miRNA	NOVEL	AC018737.1	1	1	-0.111100
chr2	121790444	121796702	121793573	ENSG00000224655.5	+	lincRNA	KNOWN	AC018737.3	4	5	-0.174182
chr2	123065321	123067722	123066521	ENSG00000237856.1	+	lincRNA	KNOWN	AC062020.2	1	2	-0.791195
chr2	123066151	123073481	123069816	ENSG00000232740.1	-	lincRNA	KNOWN	AC062020.1	1	3	-0.691330
chr2	123443266	123444445	123443855	ENSG00000226708.1	-	lincRNA	KNOWN	AC073409.1	1	2	0.192921
chr2	123695302	123697396	123696349	ENSG00000235640.1	+	processed_pseudogene	KNOWN	AC092646.1	1	1	-0.274605
chr2	123762171	123763071	123762621	ENSG00000227738.1	+	processed_pseudogene	KNOWN	AC092646.2	1	1	-0.422581
chr2	123850522	123850695	123850608	ENSG00000279874.1	-	TEC	KNOWN	RP11-329A6.1	1	1	-0.289098
chr2	123869256	123869570	123869413	ENSG00000223118.1	-	misc_RNA	KNOWN	RN7SKP102	1	1	-0.289098
chr2	124016858	124025173	124021015	ENSG00000228400.1	-	antisense	KNOWN	AC079154.1	1	2	-0.572260
chr2	124025287	124915287	124470287	ENSG00000155052.14	+	protein_coding	KNOWN	CNTNAP5	3	24	-0.335731
chr2	124680722	124680916	124680819	ENSG00000238046.1	-	processed_pseudogene	KNOWN	MTND5P22	1	1	-0.064127
chr2	124778454	124778640	124778547	ENSG00000270815.1	-	processed_pseudogene	KNOWN	RP11-56O18.1	1	1	-0.508157
chr2	124932915	124933020	124932967	ENSG00000252674.1	+	rRNA	KNOWN	RNA5SP102	1	1	-0.382788
chr2	124989219	124989325	124989272	ENSG00000206726.1	+	snRNA	KNOWN	RNU6-259P	1	1	-0.593575
chr2	125127071	125127154	125127112	ENSG00000281413.1	-	miRNA	NOVEL	AC104842.1	1	1	-0.744509
chr2	125710969	125765842	125738405	ENSG00000235491.1	+	lincRNA	KNOWN	AC097499.1	1	2	-0.495022
chr2	125823108	125823315	125823211	ENSG00000224410.1	+	processed_pseudogene	KNOWN	AC097499.2	1	1	-0.149826
chr2	126110099	126117985	126114042	ENSG00000226813.2	-	lincRNA	KNOWN	AC114813.1	1	4	-0.513036
chr2	126308510	126343992	126326251	ENSG00000235774.1	+	lincRNA	KNOWN	AC023347.1	2	3	-0.371514
chr2	126311466	126311927	126311696	ENSG00000236655.1	-	processed_pseudogene	KNOWN	AC023347.2	1	1	-0.211915
chr2	126557435	126558162	126557798	ENSG00000213236.3	-	processed_pseudogene	KNOWN	YWHAZP2	1	1	-0.600499
chr2	126655933	126696675	126676304	ENSG00000136732.14	+	protein_coding	KNOWN	GYPC	6	5	0.254116
chr2	126679622	126680420	126680021	ENSG00000235128.1	+	processed_pseudogene	KNOWN	AC013474.4	1	1	0.362846
chr2	126702839	126702942	126702890	ENSG00000206963.1	-	snRNA	KNOWN	RNU6-675P	1	1	0.221072
chr2	126898896	126902097	126900496	ENSG00000237524.7	+	processed_transcript	KNOWN	AC114783.1	7	7	0.511291
chr2	127017421	127017482	127017451	ENSG00000238788.1	+	snRNA	KNOWN	RNU7-182P	1	1	0.059202
chr2	127024252	127025723	127024987	ENSG00000260634.1	-	lincRNA	KNOWN	RP11-521O16.1	1	1	0.059202
chr2	127025211	127029686	127027448	ENSG00000260163.1	+	lincRNA	KNOWN	RP11-521O16.2	1	1	0.059202
chr2	127048027	127107355	127077691	ENSG00000136717.14	-	protein_coding	KNOWN	BIN1	14	19	0.775405
chr2	127170011	127170231	127170121	ENSG00000237630.1	+	processed_pseudogene	KNOWN	NIFKP9	1	1	0.296488
chr2	127184120	127220078	127202099	ENSG00000186684.12	-	protein_coding	KNOWN	CYP27C1	2	8	0.250258
chr2	127247258	127250082	127248670	ENSG00000226789.1	+	processed_pseudogene	KNOWN	AC110926.4	1	1	0.462835
chr2	127257290	127294176	127275733	ENSG00000163161.12	-	protein_coding	KNOWN	ERCC3	9	15	0.358160
chr2	127298730	127388465	127343597	ENSG00000169967.16	-	protein_coding	KNOWN	MAP3K2	3	17	0.154810
chr2	127316873	127316979	127316926	ENSG00000200250.1	+	snRNA	KNOWN	RNU6-1147P	1	1	-0.080993
chr2	127389130	127400580	127394855	ENSG00000236682.1	+	lincRNA	KNOWN	AC068282.3	1	2	0.366727
chr2	127418427	127429246	127423836	ENSG00000115718.17	+	protein_coding	KNOWN	PROC	10	9	0.467031
chr2	127423537	127423618	127423577	ENSG00000264075.1	-	miRNA	KNOWN	MIR4783	1	1	0.467031
chr2	127436207	127526886	127481546	ENSG00000163166.13	-	protein_coding	KNOWN	IWS1	11	14	0.334921
chr2	127455394	127514623	127485008	ENSG00000231731.7	+	antisense	KNOWN	AC010976.2	31	8	0.240092
chr2	127472234	127472415	127472324	ENSG00000202429.1	+	snRNA	KNOWN	RNU4-48P	1	1	0.343828
chr2	127535802	127637729	127586765	ENSG00000169994.18	+	protein_coding	KNOWN	MYO7B	8	47	0.599539
chr2	127625997	127626848	127626422	ENSG00000272789.1	-	antisense	KNOWN	RP11-286H15.1	1	1	0.599786
chr2	127638381	127681786	127660083	ENSG00000072163.18	-	protein_coding	KNOWN	LIMS2	19	12	0.992757
chr2	127645864	127652639	127649251	ENSG00000144230.16	+	protein_coding	KNOWN	GPR17	6	4	1.105906
chr2	127701022	127811187	127756104	ENSG00000136709.11	-	protein_coding	KNOWN	WDR33	5	22	0.367618
chr2	127701508	127705242	127703375	ENSG00000173349.5	+	protein_coding	KNOWN	SFT2D3	1	1	0.483946
chr2	127798903	127798998	127798950	ENSG00000201470.1	-	misc_RNA	KNOWN	RNY4P7	1	1	0.479984
chr2	127829747	127829852	127829799	ENSG00000200390.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.680178
chr2	127840606	127841763	127841184	ENSG00000274010.1	-	processed_pseudogene	KNOWN	RP5-935K16.2	1	1	0.466387
chr2	127843551	127858157	127850854	ENSG00000144231.10	-	protein_coding	KNOWN	POLR2D	4	4	0.610949
chr2	127845236	127845341	127845288	ENSG00000202532.1	+	snRNA	KNOWN	RNU6-395P	1	1	0.466387
chr2	127846736	127847084	127846910	ENSG00000244563.1	-	processed_pseudogene	KNOWN	AC006011.4	1	1	0.466387
chr2	127856890	127857147	127857018	ENSG00000273950.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.725209
chr2	127861630	127885922	127873776	ENSG00000144233.9	-	protein_coding	KNOWN	AMMECR1L	2	8	0.547804
chr2	127886556	127887185	127886870	ENSG00000272667.1	+	lincRNA	KNOWN	RP11-395A13.2	1	1	0.454562
chr2	127931327	127931440	127931383	ENSG00000204399.3	+	processed_pseudogene	KNOWN	AC012306.2	1	1	0.108202
chr2	127941217	128028120	127984668	ENSG00000136715.17	-	protein_coding	KNOWN	SAP130	5	21	0.163926
chr2	128067194	128067407	128067300	ENSG00000234044.1	+	processed_pseudogene	KNOWN	AC108059.1	1	1	0.037249
chr2	128067800	128067901	128067850	ENSG00000200432.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.037249
chr2	128091200	128195677	128143438	ENSG00000136731.12	+	protein_coding	KNOWN	UGGT1	7	41	0.111401
chr2	128139792	128140516	128140154	ENSG00000229173.1	-	processed_pseudogene	KNOWN	AC108059.4	1	1	0.397284
chr2	128151154	128151304	128151229	ENSG00000232101.1	-	processed_pseudogene	KNOWN	AC108059.2	1	1	0.238833
chr2	128199901	128200195	128200048	ENSG00000229758.2	+	processed_pseudogene	KNOWN	DYNLT3P2	1	1	0.184110
chr2	128203361	128203775	128203568	ENSG00000185631.7	+	processed_pseudogene	KNOWN	AC017079.3	1	1	0.184110
chr2	128217588	128218072	128217830	ENSG00000238180.1	+	processed_pseudogene	KNOWN	AC017079.4	1	1	0.091992
chr2	128236716	128318577	128277646	ENSG00000136720.6	-	protein_coding	KNOWN	HS6ST1	4	3	0.558289
chr2	128350829	128350927	128350878	ENSG00000252742.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.176466
chr2	128445081	128445198	128445139	ENSG00000238379.1	-	rRNA	KNOWN	RNA5SP103	1	1	0.401475
chr2	128518788	128519177	128518982	ENSG00000227653.1	-	processed_pseudogene	KNOWN	ISCA1P6	1	1	0.290119
chr2	128580491	128581576	128581033	ENSG00000237532.1	-	lincRNA	KNOWN	AC012451.1	1	2	0.412212
chr2	129063846	129071725	129067785	ENSG00000238277.1	-	lincRNA	KNOWN	AC068483.1	1	2	-0.301353
chr2	129242173	129273848	129258010	ENSG00000204460.3	-	lincRNA	KNOWN	AC079586.1	1	5	-0.203786
chr2	129496297	129496788	129496542	ENSG00000233428.1	+	processed_pseudogene	KNOWN	AC019050.1	1	1	-0.150985
chr2	129869193	129877553	129873373	ENSG00000229536.1	-	lincRNA	KNOWN	AC079776.1	1	2	-0.062089
chr2	129922863	129934317	129928590	ENSG00000214100.8	-	transcribed_unprocessed_pseudogene	KNOWN	AC079776.2	3	3	0.092461
chr2	129923177	129946703	129934940	ENSG00000237574.1	+	lincRNA	KNOWN	AC079776.3	1	4	0.079871
chr2	129939848	129940217	129940032	ENSG00000234559.1	-	processed_pseudogene	KNOWN	AC079776.4	1	1	0.068908
chr2	129966592	129980466	129973529	ENSG00000225449.3	-	transcribed_unprocessed_pseudogene	KNOWN	RAB6C-AS1	3	6	-0.241979
chr2	129979664	129982738	129981201	ENSG00000222014.5	+	protein_coding	KNOWN	RAB6C	1	1	-0.320556
chr2	129990456	130051131	130020793	ENSG00000180178.10	-	transcribed_unprocessed_pseudogene	KNOWN	FAR2P1	6	12	-0.262399
chr2	129992602	129993105	129992853	ENSG00000250207.1	-	unprocessed_pseudogene	KNOWN	AC079776.6	1	1	-0.201739
chr2	129992889	129994040	129993464	ENSG00000217289.3	+	processed_pseudogene	KNOWN	AC018865.5	1	1	-0.201739
chr2	130006200	130009123	130007661	ENSG00000231147.2	+	unprocessed_pseudogene	KNOWN	ARHGAP42P2	1	8	-0.201739
chr2	130036958	130038422	130037690	ENSG00000231240.1	+	processed_pseudogene	KNOWN	KLF2P1	1	2	-0.200189
chr2	130048426	130049440	130048933	ENSG00000248313.1	-	unprocessed_pseudogene	KNOWN	CYP4F27P	1	3	-0.200189
chr2	130073535	130129222	130101378	ENSG00000196604.11	-	protein_coding	KNOWN	POTEF	4	17	-0.195104
chr2	130082092	130082220	130082156	ENSG00000228471.1	-	processed_pseudogene	KNOWN	AC018865.11	1	1	-0.161983
chr2	130107684	130109741	130108712	ENSG00000224087.1	+	antisense	KNOWN	AC018804.3	1	2	-0.226370
chr2	130109204	130109310	130109257	ENSG00000252223.1	-	snRNA	KNOWN	RNU6-1049P	1	1	-0.226370
chr2	130129621	130139417	130134519	ENSG00000223760.4	+	transcribed_unprocessed_pseudogene	KNOWN	MED15P9	2	6	0.170591
chr2	130139287	130145134	130142210	ENSG00000152076.18	-	protein_coding	KNOWN	CCDC74B	11	8	0.185101
chr2	130151392	130182750	130167071	ENSG00000136699.19	-	protein_coding	KNOWN	SMPD4	20	20	0.653572
chr2	130181737	130190729	130186233	ENSG00000152082.13	+	protein_coding	KNOWN	MZT2B	8	4	0.489233
chr2	130183443	130183519	130183481	ENSG00000265280.1	+	miRNA	NOVEL	AC018804.1	1	1	0.502925
chr2	130191743	130198461	130195102	ENSG00000152086.8	-	protein_coding	KNOWN	TUBA3E	1	5	0.334268
chr2	130202312	130212628	130207470	ENSG00000227632.2	+	unprocessed_pseudogene	KNOWN	AC018804.6	1	5	0.276876
chr2	130212870	130213490	130213180	ENSG00000230756.1	-	processed_pseudogene	KNOWN	RHOQP3	1	1	0.109065
chr2	130229379	130232106	130230742	ENSG00000213225.7	+	transcribed_processed_pseudogene	KNOWN	AC018804.7	2	1	-0.092442
chr2	130245971	130248770	130247370	ENSG00000234398.1	+	unprocessed_pseudogene	KNOWN	AC134915.1	1	5	-0.151737
chr2	130251568	130252559	130252063	ENSG00000236595.1	+	processed_pseudogene	KNOWN	MED15P5	1	1	-0.177398
chr2	130270596	130272272	130271434	ENSG00000237722.1	+	unprocessed_pseudogene	KNOWN	MTND1P29	1	2	0.041660
chr2	130272479	130273511	130272995	ENSG00000231954.1	+	unprocessed_pseudogene	KNOWN	MTND2P22	1	1	0.041660
chr2	130273723	130273788	130273755	ENSG00000277699.1	+	miRNA	NOVEL	AC068137.1	1	1	0.041660
chr2	130273908	130275449	130274678	ENSG00000236211.1	+	unprocessed_pseudogene	KNOWN	MTCO1P7	1	1	0.041660
chr2	130275592	130276257	130275924	ENSG00000230496.1	+	unprocessed_pseudogene	KNOWN	MTCO2P7	1	1	0.041660
chr2	130276507	130277187	130276847	ENSG00000232990.2	+	unprocessed_pseudogene	KNOWN	MTATP6P7	1	1	0.041660
chr2	130277184	130277957	130277570	ENSG00000249997.1	+	unprocessed_pseudogene	KNOWN	MTCO3P7	1	1	0.041660
chr2	130278757	130280110	130279433	ENSG00000230548.1	+	unprocessed_pseudogene	KNOWN	MTND4P27	1	1	0.041660
chr2	130280299	130282105	130281202	ENSG00000234934.1	+	unprocessed_pseudogene	KNOWN	MTND5P29	1	1	0.041660
chr2	130282085	130282606	130282345	ENSG00000248136.1	-	unprocessed_pseudogene	KNOWN	MTND6P8	1	1	0.041660
chr2	130282679	130283329	130283004	ENSG00000233550.1	+	unprocessed_pseudogene	KNOWN	MTCYBP8	1	1	0.041660
chr2	130293822	130294405	130294113	ENSG00000226915.1	+	processed_pseudogene	KNOWN	AC068137.13	1	1	-0.043785
chr2	130313934	130314411	130314172	ENSG00000271435.1	-	processed_pseudogene	KNOWN	RP11-803A13.1	1	1	-0.043360
chr2	130330142	130330285	130330213	ENSG00000224352.1	-	unprocessed_pseudogene	KNOWN	AC132479.4	1	1	0.046668
chr2	130338241	130342349	130340295	ENSG00000136710.9	-	protein_coding	KNOWN	CCDC115	4	6	0.046668
chr2	130342225	130347810	130345017	ENSG00000136718.9	+	protein_coding	KNOWN	IMP4	17	9	0.046668
chr2	130356007	130375409	130365708	ENSG00000072135.12	+	protein_coding	KNOWN	PTPN18	16	15	0.423276
chr2	130416755	130431363	130424059	ENSG00000178162.8	-	transcribed_unprocessed_pseudogene	KNOWN	FAR2P2	8	6	-0.463735
chr2	130427731	130429225	130428478	ENSG00000230646.1	+	processed_pseudogene	KNOWN	KLF2P2	1	2	-0.505910
chr2	130429827	130441413	130435620	ENSG00000239402.3	-	transcribed_unprocessed_pseudogene	KNOWN	CYP4F62P	3	5	-0.060934
chr2	130459455	130509666	130484560	ENSG00000196834.11	-	protein_coding	KNOWN	POTEI	3	15	-0.302258
chr2	130497743	130497849	130497796	ENSG00000251973.1	-	snRNA	KNOWN	RNU6-473P	1	1	-0.361726
chr2	130515997	130526691	130521344	ENSG00000225819.1	-	antisense	KNOWN	AC013269.3	1	2	-0.198305
chr2	130517049	130517312	130517180	ENSG00000274711.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.198305
chr2	130521197	130528604	130524900	ENSG00000152093.7	+	protein_coding	KNOWN	CFC1B	3	6	-0.198305
chr2	130530275	130537182	130533728	ENSG00000225341.1	+	antisense	KNOWN	AC013269.4	1	2	0.243995
chr2	130539095	130549883	130544489	ENSG00000184761.7	-	protein_coding	KNOWN	AC013269.5	1	5	0.243995
chr2	130570829	130584161	130577495	ENSG00000183292.12	+	protein_coding	KNOWN	TISP43	6	5	0.001577
chr2	130583549	130590463	130587006	ENSG00000232408.1	-	antisense	KNOWN	AC140481.4	1	2	0.015644
chr2	130592168	130599575	130595871	ENSG00000136698.8	-	protein_coding	KNOWN	CFC1	3	6	0.211181
chr2	130603461	130603724	130603592	ENSG00000277668.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.211181
chr2	130611481	130658091	130634786	ENSG00000222038.3	+	protein_coding	KNOWN	POTEJ	1	15	-0.436398
chr2	130622838	130622944	130622891	ENSG00000251757.1	+	snRNA	KNOWN	RNU6-848P	1	1	-0.096618
chr2	130680050	130685863	130682956	ENSG00000214081.8	+	transcribed_unprocessed_pseudogene	KNOWN	CYP4F30P	3	5	0.150173
chr2	130681228	130691691	130686459	ENSG00000282944.1	+	processed_transcript	KNOWN	RP11-1216L17.1	1	5	0.116312
chr2	130690133	130718831	130704482	ENSG00000240253.5	+	transcribed_unprocessed_pseudogene	KNOWN	FAR2P3	5	5	-0.157333
chr2	130692243	130693770	130693006	ENSG00000223349.1	-	processed_pseudogene	KNOWN	KLF2P3	1	2	-0.059214
chr2	130729070	130730336	130729703	ENSG00000173302.5	+	protein_coding	KNOWN	GPR148	1	1	-0.242621
chr2	130743538	130755879	130749708	ENSG00000229797.1	-	antisense	KNOWN	AC140481.8	2	2	0.090279
chr2	130755435	130768134	130761784	ENSG00000178171.10	+	protein_coding	KNOWN	AMER3	4	2	0.045895
chr2	130776646	130776957	130776801	ENSG00000232503.1	+	processed_pseudogene	KNOWN	CYCSP8	1	1	-0.088043
chr2	130830978	130836994	130833986	ENSG00000233221.6	-	antisense	KNOWN	AC133785.1	2	2	0.344179
chr2	130836916	131047263	130942089	ENSG00000136002.16	+	protein_coding	KNOWN	ARHGEF4	17	16	0.024323
chr2	130929762	130929883	130929822	ENSG00000281159.1	-	scaRNA	NOVEL	SCARNA15	1	1	-0.157368
chr2	130929762	130929884	130929823	ENSG00000281516.1	-	scaRNA	NOVEL	SCARNA4	1	1	-0.157368
chr2	131047876	131093460	131070668	ENSG00000152102.17	-	protein_coding	KNOWN	FAM168B	2	7	0.277829
chr2	131104847	131353709	131229278	ENSG00000115762.16	+	protein_coding	KNOWN	PLEKHB2	11	9	-0.181393
chr2	131177618	131178946	131178282	ENSG00000230450.1	-	processed_pseudogene	KNOWN	NEK2P4	1	1	-0.243799
chr2	131181153	131181369	131181261	ENSG00000225448.1	-	processed_pseudogene	KNOWN	AC009477.7	1	1	-0.243799
chr2	131189834	131197493	131193663	ENSG00000236956.1	-	unprocessed_pseudogene	KNOWN	NF1P8	1	9	-0.472586
chr2	131201142	131202941	131202041	ENSG00000248796.1	-	unprocessed_pseudogene	KNOWN	MED15P8	1	4	-0.477623
chr2	131218067	131265278	131241672	ENSG00000188219.14	+	protein_coding	KNOWN	POTEE	5	15	-0.447582
chr2	131229607	131229713	131229660	ENSG00000212199.1	+	snRNA	KNOWN	RNU6-127P	1	1	-0.419654
chr2	131279290	131309068	131294179	ENSG00000231431.7	+	transcribed_unprocessed_pseudogene	KNOWN	FAR2P4	3	6	-0.061361
chr2	131299220	131300444	131299832	ENSG00000236516.1	-	processed_pseudogene	KNOWN	KLF2P4	1	1	0.038411
chr2	131328176	131330857	131329516	ENSG00000227817.4	-	unprocessed_pseudogene	KNOWN	ARHGAP42P1	1	3	-0.528067
chr2	131352214	131353239	131352726	ENSG00000224425.2	-	processed_pseudogene	KNOWN	AC073869.2	1	1	-0.568738
chr2	131362956	131363720	131363338	ENSG00000233087.6	-	transcribed_processed_pseudogene	KNOWN	AC073869.1	2	1	-0.568738
chr2	131369062	131369711	131369386	ENSG00000233285.1	-	unprocessed_pseudogene	KNOWN	MTCYBP10	1	1	-0.568738
chr2	131369785	131370301	131370043	ENSG00000227275.1	+	unprocessed_pseudogene	KNOWN	MTND6P10	1	1	-0.333021
chr2	131370421	131372075	131371248	ENSG00000235080.1	-	unprocessed_pseudogene	KNOWN	MTND5P23	1	1	-0.165989
chr2	131372294	131373650	131372972	ENSG00000231777.1	-	unprocessed_pseudogene	KNOWN	MTND4P21	1	1	-0.165989
chr2	131380153	131380913	131380533	ENSG00000227661.1	-	unprocessed_pseudogene	KNOWN	MTCO3P18	1	1	-0.165989
chr2	131380916	131381590	131381253	ENSG00000236590.1	-	unprocessed_pseudogene	KNOWN	MTATP6P4	1	1	-0.165989
chr2	131381840	131382497	131382168	ENSG00000234480.1	-	unprocessed_pseudogene	KNOWN	MTCO2P18	1	1	-0.165989
chr2	131382643	131384061	131383352	ENSG00000237910.1	-	unprocessed_pseudogene	KNOWN	MTCO1P18	1	1	-0.165989
chr2	131384461	131385490	131384975	ENSG00000234939.1	-	unprocessed_pseudogene	KNOWN	MTND2P18	1	1	-0.165989
chr2	131385700	131386237	131385968	ENSG00000234576.1	-	unprocessed_pseudogene	KNOWN	MTND1P26	1	1	-0.165989
chr2	131395217	131395542	131395379	ENSG00000226831.1	-	processed_pseudogene	KNOWN	MED15P3	1	1	0.213455
chr2	131398439	131401250	131399844	ENSG00000276460.1	-	unprocessed_pseudogene	KNOWN	RP11-109E12.4	1	5	0.213455
chr2	131402901	131409049	131405975	ENSG00000223631.1	+	lincRNA	KNOWN	LINC01120	1	4	0.213455
chr2	131423801	131424867	131424334	ENSG00000214077.4	-	processed_pseudogene	KNOWN	GNAQP1	1	1	-0.172554
chr2	131442644	131444587	131443615	ENSG00000217950.4	-	processed_pseudogene	KNOWN	AC073869.20	1	1	-0.366438
chr2	131460999	131461577	131461288	ENSG00000232742.3	+	processed_pseudogene	KNOWN	RHOQP2	1	1	-0.130401
chr2	131461821	131463615	131462718	ENSG00000273073.1	-	lincRNA	KNOWN	RP11-109E12.1	1	2	-0.130401
chr2	131464900	131492743	131478821	ENSG00000173272.13	-	protein_coding	KNOWN	MZT2A	6	5	-0.023890
chr2	131476093	131482934	131479513	ENSG00000075886.10	+	protein_coding	KNOWN	TUBA3D	2	5	-0.052825
chr2	131491160	131491236	131491198	ENSG00000265575.1	-	miRNA	KNOWN	MIR4784	1	1	0.384928
chr2	131492813	131521573	131507193	ENSG00000152117.17	+	transcribed_processed_pseudogene	KNOWN	AC093838.4	2	19	0.456710
chr2	131527675	131533666	131530670	ENSG00000163040.14	+	protein_coding	KNOWN	CCDC74A	8	8	0.371752
chr2	131535187	131536988	131536087	ENSG00000224679.1	-	unprocessed_pseudogene	KNOWN	MED15P4	1	4	0.250357
chr2	131591752	131627266	131609509	ENSG00000204434.5	+	unprocessed_pseudogene	KNOWN	POTEKP	1	11	-0.399183
chr2	131602790	131602896	131602843	ENSG00000251956.1	+	snRNA	KNOWN	RNU6-617P	1	1	-0.222323
chr2	131625957	131628147	131627052	ENSG00000273588.1	+	unprocessed_pseudogene	KNOWN	RP11-433A19.2	1	2	-0.586080
chr2	131637025	131649615	131643320	ENSG00000224559.2	+	lincRNA	KNOWN	LINC01087	1	2	-0.209178
chr2	131646704	131648372	131647538	ENSG00000270930.1	-	processed_pseudogene	KNOWN	GRAMD4P8	1	2	-0.209178
chr2	131722375	131767404	131744889	ENSG00000197927.12	+	transcribed_unprocessed_pseudogene	KNOWN	C2orf27A	5	6	-0.322495
chr2	131723253	131724279	131723766	ENSG00000213222.3	-	processed_pseudogene	KNOWN	AC093724.2	1	1	-0.155318
chr2	131794961	131801661	131798311	ENSG00000186825.5	-	lincRNA	KNOWN	C2orf27B	1	3	-0.151934
chr2	131821987	131822920	131822453	ENSG00000274353.1	-	unprocessed_pseudogene	KNOWN	RP11-788A1.1	1	2	0.054902
chr2	131829801	131832031	131830916	ENSG00000229203.1	-	lincRNA	KNOWN	AC103564.7	1	3	0.088699
chr2	131833783	131836532	131835157	ENSG00000232760.1	-	unprocessed_pseudogene	KNOWN	AC103564.6	1	5	0.091992
chr2	131958277	131965535	131961906	ENSG00000244337.2	+	lincRNA	KNOWN	AJ239322.3	1	2	-0.713361
chr2	131964731	131979873	131972302	ENSG00000235615.2	-	lincRNA	KNOWN	AJ239322.1	1	3	-0.595659
chr2	131983937	131994161	131989049	ENSG00000236485.1	-	lincRNA	KNOWN	RP1-156L9.1	1	2	-0.676028
chr2	132037787	132037993	132037890	ENSG00000226886.1	-	processed_pseudogene	KNOWN	AC093787.1	1	1	-0.646922
chr2	132080290	132080755	132080522	ENSG00000271179.1	-	processed_pseudogene	KNOWN	RP11-629P16.1	1	1	-0.242163
chr2	132087289	132102564	132094926	ENSG00000225594.1	+	unprocessed_pseudogene	KNOWN	AC098826.4	1	3	-0.565702
chr2	132132856	132139429	132136142	ENSG00000227745.1	-	unprocessed_pseudogene	KNOWN	AC098826.5	1	4	-0.618502
chr2	132147591	132257969	132202780	ENSG00000163046.15	-	protein_coding	KNOWN	ANKRD30BL	6	7	-0.266173
chr2	132152243	132152349	132152296	ENSG00000239108.1	-	snRNA	KNOWN	RNU6-1132P	1	1	-0.511781
chr2	132253154	132253305	132253229	ENSG00000202174.1	-	rRNA	KNOWN	RNA5-8SP5	1	1	0.306731
chr2	132256966	132257080	132257023	ENSG00000221288.1	-	miRNA	KNOWN	MIR663B	1	1	0.306731
chr2	132262328	132263042	132262685	ENSG00000233786.1	+	processed_pseudogene	KNOWN	CDC27P1	1	1	0.306731
chr2	132285795	132294377	132290086	ENSG00000230803.1	-	lincRNA	KNOWN	AC097532.2	1	3	0.138631
chr2	132309309	132318736	132314022	ENSG00000018607.6	+	unprocessed_pseudogene	KNOWN	ZNF806	1	3	0.093810
chr2	132345616	132347297	132346456	ENSG00000272769.1	-	lincRNA	KNOWN	RP11-725P16.2	1	1	-0.101950
chr2	132352722	132353318	132353020	ENSG00000230992.3	+	processed_pseudogene	KNOWN	FAM201B	1	1	-0.306874
chr2	132406752	132406858	132406805	ENSG00000252705.1	-	snRNA	KNOWN	RNU6-175P	1	1	-0.147079
chr2	132416574	132646559	132531566	ENSG00000183840.6	+	protein_coding	KNOWN	GPR39	3	3	-0.065188
chr2	132488554	132489088	132488821	ENSG00000232349.2	-	processed_pseudogene	KNOWN	YBX1P7	1	1	-0.462809
chr2	132523617	132523936	132523776	ENSG00000200718.1	+	misc_RNA	KNOWN	RN7SKP103	1	1	-0.074980
chr2	132523985	132524092	132524038	ENSG00000221142.1	+	miRNA	NOVEL	AC104405.1	1	1	-0.074980
chr2	132644853	132671579	132658216	ENSG00000150551.10	-	protein_coding	KNOWN	LYPD1	3	3	-0.116670
chr2	132660526	132666990	132663758	ENSG00000230065.1	+	antisense	KNOWN	AC010974.3	1	2	-0.175001
chr2	132671799	133568463	133120131	ENSG00000176771.15	-	protein_coding	KNOWN	NCKAP5	7	21	-0.154561
chr2	132748582	132748670	132748626	ENSG00000281774.1	-	miRNA	NOVEL	AC010974.1	1	1	-0.070280
chr2	132911096	132911261	132911178	ENSG00000228721.1	-	processed_pseudogene	KNOWN	AC016909.2	1	1	-0.069472
chr2	132915557	132931494	132923525	ENSG00000233729.1	+	antisense	KNOWN	AC016909.1	1	2	-0.073632
chr2	133117004	133119052	133118028	ENSG00000279512.1	+	TEC	KNOWN	RP11-575M22.1	1	1	-0.323046
chr2	133264968	133284762	133274865	ENSG00000226953.7	+	antisense	KNOWN	AC010890.1	3	5	0.034824
chr2	133333829	133333930	133333879	ENSG00000252688.1	+	snRNA	KNOWN	RNU6-579P	1	1	0.075313
chr2	133391109	133391398	133391253	ENSG00000222068.1	-	misc_RNA	KNOWN	RN7SKP154	1	1	-0.060011
chr2	133431666	133433897	133432781	ENSG00000232474.1	-	sense_intronic	KNOWN	NCKAP5-IT1	1	2	-0.164107
chr2	133554315	133558227	133556271	ENSG00000223430.1	+	lincRNA	KNOWN	AC011243.1	1	3	-0.031523
chr2	133596091	133596399	133596245	ENSG00000200708.1	+	misc_RNA	KNOWN	RN7SKP93	1	1	-0.051500
chr2	134119983	134454621	134287302	ENSG00000152127.8	+	protein_coding	KNOWN	MGAT5	5	17	0.133065
chr2	134127125	134127192	134127158	ENSG00000263813.1	+	miRNA	KNOWN	MIR3679	1	1	0.235117
chr2	134231195	134231312	134231253	ENSG00000222921.1	+	rRNA	KNOWN	RNA5SP104	1	1	0.205521
chr2	134319654	134320078	134319866	ENSG00000234060.1	-	processed_pseudogene	KNOWN	EDDM3CP	1	1	-0.146619
chr2	134455759	134719000	134587379	ENSG00000152128.13	-	protein_coding	KNOWN	TMEM163	3	8	-0.119225
chr2	134735464	134918710	134827087	ENSG00000224043.7	-	antisense	KNOWN	CCNT2-AS1	3	4	-0.166515
chr2	134797169	134797879	134797524	ENSG00000234682.1	+	processed_pseudogene	KNOWN	VDAC2P4	1	1	-0.294477
chr2	134816362	134816589	134816475	ENSG00000228098.1	+	processed_pseudogene	KNOWN	AC110620.1	1	1	-0.184848
chr2	134838547	134902034	134870290	ENSG00000153086.13	+	protein_coding	KNOWN	ACMSD	4	10	-0.193192
chr2	134857820	134857873	134857846	ENSG00000263783.1	+	miRNA	KNOWN	MIR5590	1	1	-0.153419
chr2	134918235	134959342	134938788	ENSG00000082258.12	+	protein_coding	KNOWN	CCNT2	10	11	-0.162122
chr2	134964491	135047468	135005979	ENSG00000176601.11	-	protein_coding	KNOWN	MAP3K19	12	10	-0.191042
chr2	135052265	135176394	135114329	ENSG00000115839.17	+	protein_coding	KNOWN	RAB3GAP1	7	25	-0.058289
chr2	135136628	135136755	135136691	ENSG00000208308.1	+	snoRNA	NOVEL	SNORA40	1	1	-0.108827
chr2	135136916	135531236	135334076	ENSG00000121988.17	-	protein_coding	KNOWN	ZRANB3	11	22	-0.246406
chr2	135510546	135511943	135511244	ENSG00000235651.1	-	processed_pseudogene	KNOWN	AC064850.4	1	1	-0.209472
chr2	135531455	135725270	135628362	ENSG00000048991.16	+	protein_coding	KNOWN	R3HDM1	20	26	-0.192064
chr2	135656477	135656579	135656528	ENSG00000201308.1	-	snRNA	KNOWN	RNU6-512P	1	1	-0.267904
chr2	135665383	135665493	135665438	ENSG00000207654.3	+	miRNA	KNOWN	MIR128-1	1	1	-0.267904
chr2	135741619	135785055	135763337	ENSG00000144224.16	+	protein_coding	KNOWN	UBXN4	8	13	0.148229
chr2	135787840	135837180	135812510	ENSG00000115850.9	-	protein_coding	KNOWN	LCT	2	17	0.077532
chr2	135810169	135810279	135810224	ENSG00000200664.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.021665
chr2	135820191	135823087	135821639	ENSG00000226806.1	+	antisense	KNOWN	AC011893.3	1	2	-0.021665
chr2	135839626	135876426	135858026	ENSG00000076003.4	-	protein_coding	KNOWN	MCM6	3	17	0.041954
chr2	135897955	135898978	135898466	ENSG00000214070.3	-	processed_pseudogene	KNOWN	AC011999.1	1	1	0.108866
chr2	135906677	135986100	135946388	ENSG00000115866.10	-	protein_coding	KNOWN	DARS	11	16	-0.246483
chr2	135985176	136022593	136003884	ENSG00000231890.7	+	antisense	KNOWN	DARS-AS1	30	6	0.174352
chr2	136077892	136078513	136078202	ENSG00000237262.1	+	lincRNA	KNOWN	AC068492.1	1	2	-0.177004
chr2	136114349	136118165	136116257	ENSG00000121966.6	-	protein_coding	KNOWN	CXCR4	3	2	0.055466
chr2	136199114	136200503	136199808	ENSG00000227347.1	-	processed_pseudogene	KNOWN	HNRNPKP2	1	1	-0.033539
chr2	136230753	136233245	136231999	ENSG00000279024.1	+	TEC	KNOWN	RP11-1193F23.1	1	1	-0.367440
chr2	136329441	136329913	136329677	ENSG00000230037.1	-	processed_pseudogene	KNOWN	UBBP1	1	1	-0.442597
chr2	136390332	136390669	136390500	ENSG00000251976.1	+	misc_RNA	KNOWN	RN7SKP141	1	1	0.083580
chr2	136544371	136544480	136544425	ENSG00000216081.1	+	miRNA	NOVEL	AC010146.1	1	1	-0.279102
chr2	136544712	136545542	136545127	ENSG00000229568.1	+	unprocessed_pseudogene	KNOWN	SMC4P1	1	2	-0.279102
chr2	136645108	136645192	136645150	ENSG00000221762.1	-	miRNA	NOVEL	AC092786.1	1	1	-0.197515
chr2	136765545	137677717	137221631	ENSG00000144229.11	+	protein_coding	KNOWN	THSD7B	6	28	-0.381146
chr2	137512098	137512210	137512154	ENSG00000212425.1	-	rRNA	KNOWN	RNA5SP105	1	1	-0.184526
chr2	137715332	137715440	137715386	ENSG00000222394.2	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.526918
chr2	137964020	138016364	137990192	ENSG00000150540.13	+	protein_coding	KNOWN	HNMT	8	7	-0.358204
chr2	138101884	138105905	138103894	ENSG00000224231.1	+	lincRNA	KNOWN	AC069394.1	1	3	-0.179921
chr2	138278574	138279210	138278892	ENSG00000233045.1	+	processed_pseudogene	KNOWN	AC097523.1	1	1	-0.633501
chr2	138288029	138288793	138288411	ENSG00000234645.3	-	processed_pseudogene	KNOWN	YWHAEP5	1	1	-0.633501
chr2	138307319	138307970	138307644	ENSG00000237939.1	+	processed_pseudogene	KNOWN	AC097523.3	1	1	-0.038405
chr2	138412066	138413318	138412692	ENSG00000232915.1	-	processed_pseudogene	KNOWN	AC097721.1	1	1	-0.421269
chr2	138418284	138501698	138459991	ENSG00000228043.5	-	lincRNA	KNOWN	AC097721.2	2	5	-0.415242
chr2	138470656	138473932	138472294	ENSG00000230569.1	+	lincRNA	KNOWN	AC114763.1	1	3	-0.534550
chr2	138501801	138573547	138537674	ENSG00000144228.8	+	protein_coding	KNOWN	SPOPL	4	11	-0.234204
chr2	138569090	138574458	138571774	ENSG00000241772.2	+	3prime_overlapping_ncrna	KNOWN	AC092620.2	2	2	-0.604130
chr2	138599663	138602426	138601044	ENSG00000260059.1	-	lincRNA	KNOWN	RP11-231E19.1	1	1	-0.550852
chr2	138604510	138613167	138608838	ENSG00000237772.1	+	lincRNA	KNOWN	AC092620.3	1	2	-0.338816
chr2	138670772	138780348	138725560	ENSG00000144227.4	-	protein_coding	KNOWN	NXPH2	1	2	-0.395062
chr2	138863597	138863895	138863746	ENSG00000222826.1	-	misc_RNA	KNOWN	RN7SKP286	1	1	-0.625278
chr2	138897151	138898098	138897624	ENSG00000229104.1	+	processed_pseudogene	KNOWN	YY1P2	1	1	-0.245509
chr2	138901433	138902747	138902090	ENSG00000232992.2	-	processed_pseudogene	KNOWN	AHCYP4	1	1	-0.245509
chr2	139366165	139379147	139372656	ENSG00000226939.1	+	lincRNA	KNOWN	AC062021.1	1	4	-0.385692
chr2	139469775	139477747	139473761	ENSG00000229131.1	+	lincRNA	KNOWN	AC016710.1	1	2	-0.274855
chr2	139511424	139511555	139511489	ENSG00000206901.1	+	snoRNA	NOVEL	SNORA72	1	1	-0.513729
chr2	139668547	139669305	139668926	ENSG00000235232.1	+	processed_pseudogene	KNOWN	MRPS18BP2	1	1	-0.681416
chr2	139732708	139733282	139732995	ENSG00000228374.1	-	processed_pseudogene	KNOWN	AC012497.2	1	1	-0.924687
chr2	139824896	139825877	139825386	ENSG00000223554.1	-	lincRNA	KNOWN	AC078851.1	1	2	-0.874061
chr2	139826692	139826781	139826736	ENSG00000221074.1	+	miRNA	NOVEL	AC078851.2	1	1	-0.874061
chr2	139982684	139982986	139982835	ENSG00000240977.3	+	misc_RNA	KNOWN	RN7SL283P	1	1	-0.509746
chr2	140103583	140131780	140117681	ENSG00000224028.1	-	lincRNA	KNOWN	AC073928.2	1	4	-0.667248
chr2	140105814	140105920	140105867	ENSG00000281595.1	-	miRNA	NOVEL	AC073928.1	1	1	-0.586080
chr2	140216997	140217239	140217118	ENSG00000227149.1	-	processed_pseudogene	KNOWN	MTCO1P44	1	1	-0.259174
chr2	140217651	140220368	140219009	ENSG00000231567.1	-	unprocessed_pseudogene	KNOWN	MTND2P19	1	2	-0.259174
chr2	140220584	140221485	140221034	ENSG00000223921.1	-	processed_pseudogene	KNOWN	MTND1P27	1	1	-0.259174
chr2	140231423	142131701	141181562	ENSG00000168702.16	-	protein_coding	KNOWN	LRP1B	6	91	-0.643078
chr2	140234737	140234923	140234830	ENSG00000277306.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.358670
chr2	140683360	140683888	140683624	ENSG00000236440.1	-	processed_pseudogene	KNOWN	AC117947.1	1	1	-0.598525
chr2	140898423	140899106	140898764	ENSG00000238065.1	+	processed_pseudogene	KNOWN	AC010740.1	1	1	-0.609485
chr2	140992543	140992659	140992601	ENSG00000201892.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.340968
chr2	141167257	141167357	141167307	ENSG00000252015.1	-	snRNA	KNOWN	RNU6-904P	1	1	-0.756005
chr2	141208082	141208376	141208229	ENSG00000233329.1	-	processed_pseudogene	KNOWN	AC068287.1	1	1	-0.384036
chr2	141606680	141606810	141606745	ENSG00000281341.1	-	miRNA	NOVEL	AC093859.1	1	1	-0.685616
chr2	141638844	141638963	141638903	ENSG00000265224.1	+	miRNA	NOVEL	AC012353.1	1	1	-0.446874
chr2	141997377	141997487	141997432	ENSG00000266259.1	+	miRNA	NOVEL	AC012003.1	1	1	-0.298323
chr2	142131178	142137830	142134504	ENSG00000244125.1	-	sense_overlapping	KNOWN	AC078882.1	1	2	-0.827590
chr2	142312940	142313008	142312974	ENSG00000239131.1	-	miRNA	NOVEL	AC016706.1	1	1	-0.285482
chr2	142543418	142543975	142543696	ENSG00000228134.1	+	processed_pseudogene	KNOWN	AC092578.1	1	1	-0.560085
chr2	142854095	142855998	142855046	ENSG00000229781.1	+	processed_pseudogene	KNOWN	AC013444.1	1	1	-0.468309
chr2	142877498	143055832	142966665	ENSG00000115919.14	+	protein_coding	KNOWN	KYNU	9	15	-0.471865
chr2	142947300	142948086	142947693	ENSG00000270390.1	-	processed_pseudogene	KNOWN	RP11-470B22.1	1	1	-0.276251
chr2	143005700	143005791	143005745	ENSG00000221169.2	-	miRNA	NOVEL	AC013444.2	1	1	-0.715363
chr2	143091362	143768352	143429857	ENSG00000075884.12	+	protein_coding	KNOWN	ARHGAP15	14	14	-0.470063
chr2	143093056	143094164	143093610	ENSG00000224288.2	-	processed_pseudogene	KNOWN	MTCYBP11	1	1	-0.950821
chr2	143094233	143094715	143094474	ENSG00000226839.1	+	processed_pseudogene	KNOWN	MTND6P11	1	1	-0.950821
chr2	143094789	143096555	143095672	ENSG00000224852.1	-	processed_pseudogene	KNOWN	MTND5P24	1	1	-0.950821
chr2	143096839	143098007	143097423	ENSG00000232772.1	-	processed_pseudogene	KNOWN	MTND4P22	1	1	-0.950821
chr2	143098123	143098417	143098270	ENSG00000236300.2	-	processed_pseudogene	KNOWN	MTND4LP12	1	1	-0.950821
chr2	143098484	143098829	143098656	ENSG00000227557.1	-	processed_pseudogene	KNOWN	MTND3P9	1	1	-0.950821
chr2	143098898	143099933	143099415	ENSG00000225476.1	-	processed_pseudogene	KNOWN	AC013437.6	1	2	-0.950821
chr2	143100930	143101355	143101142	ENSG00000231766.1	-	processed_pseudogene	KNOWN	AC013437.7	1	1	-0.950821
chr2	143162078	143172172	143167125	ENSG00000257284.1	-	antisense	KNOWN	RP11-190J23.1	1	4	-0.362159
chr2	143295421	143480789	143388105	ENSG00000228655.6	-	antisense	KNOWN	AC096558.1	3	4	-0.648651
chr2	143295586	143572105	143433845	ENSG00000257640.1	-	antisense	KNOWN	RP11-570L15.2	1	3	-0.548466
chr2	143518867	143598002	143558434	ENSG00000258268.1	-	antisense	KNOWN	RP11-570L15.1	1	5	-0.235159
chr2	143640756	143656179	143648467	ENSG00000231758.2	-	antisense	KNOWN	AC092652.1	2	3	-0.574882
chr2	143676165	143741294	143708729	ENSG00000257277.1	-	antisense	KNOWN	RP11-434H14.1	2	2	-0.120361
chr2	143766620	143776073	143771346	ENSG00000257226.1	-	antisense	KNOWN	CTD-2252P21.1	1	3	-0.106466
chr2	143799467	143819599	143809533	ENSG00000236356.1	+	lincRNA	KNOWN	AC079584.2	1	3	-0.270630
chr2	143897263	143897361	143897312	ENSG00000200287.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.153987
chr2	143937073	143964156	143950614	ENSG00000232377.1	+	antisense	KNOWN	AC016910.1	1	3	-0.408620
chr2	143938068	144332568	144135318	ENSG00000121964.14	-	protein_coding	KNOWN	GTDC1	20	13	-0.243265
chr2	144384081	144524583	144454332	ENSG00000169554.16	-	protein_coding	KNOWN	ZEB2	33	11	-0.130951
chr2	144444848	144450450	144447649	ENSG00000283118.1	+	antisense	KNOWN	RP11-107E5.4	1	5	-0.264998
chr2	144494265	144496878	144495571	ENSG00000279166.1	-	TEC	KNOWN	RP11-107E5.3	1	1	-0.221669
chr2	144518097	144521477	144519787	ENSG00000238057.8	+	antisense	KNOWN	ZEB2-AS1	13	5	0.381498
chr2	144518447	144518574	144518510	ENSG00000275372.1	+	misc_RNA	NOVEL	ZEB2_AS1_1	1	1	0.381498
chr2	144520456	144520555	144520505	ENSG00000273537.1	+	misc_RNA	NOVEL	ZEB2_AS1_3	1	1	0.381498
chr2	144521039	144521116	144521077	ENSG00000277444.1	+	misc_RNA	NOVEL	ZEB2_AS1_4	1	1	0.381498
chr2	144566435	144579434	144572934	ENSG00000232606.1	+	lincRNA	KNOWN	LINC01412	1	2	-0.262917
chr2	144667967	145262988	144965477	ENSG00000226674.8	+	lincRNA	KNOWN	TEX41	103	8	-0.316699
chr2	144688413	144690185	144689299	ENSG00000234940.1	-	lincRNA	KNOWN	AC023128.1	1	2	-0.204402
chr2	144705217	144705419	144705318	ENSG00000276706.1	+	misc_RNA	NOVEL	VIS1	1	1	-0.384822
chr2	144754776	144755998	144755387	ENSG00000235352.1	-	processed_pseudogene	KNOWN	AC023128.2	1	1	-0.223695
chr2	144877734	144882033	144879883	ENSG00000268580.1	-	lincRNA	KNOWN	RP11-514A9.1	1	3	-0.375401
chr2	145294277	145331847	145313062	ENSG00000235435.1	-	lincRNA	KNOWN	AC064865.1	1	5	-0.556811
chr2	145337230	145338057	145337643	ENSG00000214064.3	+	processed_pseudogene	KNOWN	RPL6P5	1	1	-0.451370
chr2	145569294	145588024	145578659	ENSG00000225107.1	-	lincRNA	KNOWN	AC092484.1	1	4	-0.634685
chr2	145600907	145603423	145602165	ENSG00000226218.1	-	lincRNA	KNOWN	AC079163.1	1	3	-0.300326
chr2	145826285	145827830	145827057	ENSG00000234119.1	-	processed_pseudogene	KNOWN	AC079248.1	1	1	-0.642027
chr2	145874520	145874845	145874682	ENSG00000279876.1	-	TEC	KNOWN	RP11-24J11.1	1	1	-0.597940
chr2	145915090	145931146	145923118	ENSG00000233842.1	+	lincRNA	KNOWN	AC062031.1	1	4	-0.834424
chr2	146145156	146145217	146145186	ENSG00000251905.1	+	snRNA	KNOWN	RNU7-2P	1	1	-0.736056
chr2	146194296	146194821	146194558	ENSG00000230559.1	+	processed_pseudogene	KNOWN	RPL17P12	1	1	-0.620432
chr2	146477427	146478113	146477770	ENSG00000227134.1	+	processed_pseudogene	KNOWN	AC093084.1	1	1	-0.363954
chr2	146587506	146589310	146588408	ENSG00000198526.7	+	processed_pseudogene	KNOWN	PABPC1P2	1	1	-0.748530
chr2	146833501	146834038	146833769	ENSG00000271583.1	-	processed_pseudogene	KNOWN	RP11-638D14.1	1	1	-0.525211
chr2	146837749	146850310	146844029	ENSG00000231040.1	+	lincRNA	KNOWN	AC103881.1	1	6	-0.529470
chr2	146879909	146898218	146889063	ENSG00000227902.2	+	lincRNA	KNOWN	AC062032.1	1	5	-0.795150
chr2	147408342	147408448	147408395	ENSG00000207225.1	+	snRNA	KNOWN	RNU6-692P	1	1	-0.693609
chr2	147466630	147466714	147466672	ENSG00000221289.2	-	miRNA	NOVEL	AC013406.1	1	1	-0.260310
chr2	147472133	147472243	147472188	ENSG00000207161.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.281823
chr2	147495438	147495540	147495489	ENSG00000202074.1	-	snRNA	KNOWN	RNU6-715P	1	1	-0.612880
chr2	147713455	147713554	147713504	ENSG00000253083.1	-	rRNA	KNOWN	RNA5SP106	1	1	-0.592806
chr2	147810346	147810777	147810561	ENSG00000229143.1	+	processed_pseudogene	KNOWN	AC009480.4	1	1	-0.561277
chr2	147844517	147930826	147887671	ENSG00000121989.14	+	protein_coding	KNOWN	ACVR2A	7	12	-0.453080
chr2	147877422	147877528	147877475	ENSG00000212389.1	+	snRNA	KNOWN	RNU6-1275P	1	1	-0.438523
chr2	147899401	147902956	147901178	ENSG00000223911.1	-	antisense	KNOWN	AC009480.3	1	3	-0.502016
chr2	147930397	148021604	147976000	ENSG00000115947.13	-	protein_coding	KNOWN	ORC4	16	15	-0.409006
chr2	147940980	147941071	147941025	ENSG00000265049.1	-	miRNA	NOVEL	AC009480.1	1	1	-0.262673
chr2	148021011	148516971	148268991	ENSG00000204406.11	+	protein_coding	KNOWN	MBD5	15	15	-0.396302
chr2	148044380	148044894	148044637	ENSG00000281469.1	+	TEC	KNOWN	RP11-567F11.1	1	1	-0.436185
chr2	148062154	148062577	148062365	ENSG00000281772.1	+	TEC	KNOWN	RP11-567F11.2	1	1	-0.584311
chr2	148260574	148260708	148260641	ENSG00000212181.1	-	snoRNA	NOVEL	SNORA48	1	1	0.223236
chr2	148295656	148296679	148296167	ENSG00000224007.1	-	processed_pseudogene	KNOWN	AC019070.1	1	1	-0.531445
chr2	148595158	148595328	148595243	ENSG00000232238.1	+	processed_pseudogene	KNOWN	AC017080.1	1	1	-0.020035
chr2	148644440	148787568	148716004	ENSG00000135999.11	+	protein_coding	KNOWN	EPC2	6	14	-0.325546
chr2	148825691	148825835	148825763	ENSG00000222126.1	-	snRNA	KNOWN	RNU2-9P	1	1	-0.071833
chr2	148863564	148863804	148863684	ENSG00000223962.1	-	processed_pseudogene	KNOWN	UBBP3	1	1	-0.048186
chr2	148866470	148888823	148877646	ENSG00000231079.7	-	antisense	KNOWN	AC105402.4	4	4	-0.395850
chr2	148870024	148870381	148870202	ENSG00000228848.3	-	processed_pseudogene	KNOWN	AC105402.2	1	1	-0.461028
chr2	148872253	148872797	148872525	ENSG00000226340.1	-	processed_pseudogene	KNOWN	AC105402.3	1	1	-0.461028
chr2	148875250	149026759	148951004	ENSG00000168280.16	+	protein_coding	KNOWN	KIF5C	5	26	-0.155499
chr2	149038107	149215262	149126684	ENSG00000150556.16	+	protein_coding	KNOWN	LYPD6B	11	9	-0.059106
chr2	149068596	149068910	149068753	ENSG00000228236.2	-	processed_pseudogene	KNOWN	TXNP5	1	1	-0.227945
chr2	149320593	149321436	149321014	ENSG00000224337.1	+	processed_pseudogene	KNOWN	FAM8A3P	1	1	0.059931
chr2	149329985	149474148	149402066	ENSG00000187123.14	+	protein_coding	KNOWN	LYPD6	5	8	0.000439
chr2	149439897	149440427	149440162	ENSG00000223604.1	+	processed_pseudogene	KNOWN	AC007394.3	1	1	-0.021665
chr2	149569634	149587816	149578725	ENSG00000168288.12	-	protein_coding	KNOWN	MMADHC	4	9	-0.114551
chr2	149587196	149848233	149717714	ENSG00000231969.1	+	antisense	KNOWN	AC144449.1	1	3	-0.225404
chr2	149610668	149610774	149610721	ENSG00000207270.1	-	snRNA	KNOWN	RNU6-601P	1	1	-0.270578
chr2	149767506	149859191	149813348	ENSG00000162947.4	-	lincRNA	KNOWN	AC007364.1	2	5	-0.253638
chr2	150171423	150301080	150236251	ENSG00000230645.1	+	lincRNA	KNOWN	AC016682.1	1	3	-0.079344
chr2	150234892	150257007	150245949	ENSG00000231420.1	-	lincRNA	KNOWN	AC113610.1	1	3	-0.100532
chr2	150468195	150539011	150503603	ENSG00000115963.13	-	protein_coding	KNOWN	RND3	9	6	-0.022715
chr2	150552532	150572221	150562376	ENSG00000236049.1	-	lincRNA	KNOWN	AC104777.2	1	6	-0.196129
chr2	150566134	150568080	150567107	ENSG00000237220.1	+	lincRNA	KNOWN	AC104777.3	1	3	-0.229936
chr2	150595102	150620067	150607584	ENSG00000232359.1	-	lincRNA	KNOWN	AC104777.1	1	2	0.140896
chr2	150612381	150635348	150623864	ENSG00000224048.5	+	lincRNA	KNOWN	AC104777.4	5	5	-0.138584
chr2	150982506	151003474	150992990	ENSG00000228064.1	+	antisense	KNOWN	AC023469.2	1	4	-0.178058
chr2	151001220	151048774	151024997	ENSG00000222031.1	-	lincRNA	KNOWN	AC023469.1	1	5	-0.201679
chr2	151117955	151186209	151152082	ENSG00000236885.1	-	lincRNA	KNOWN	AC018731.3	1	3	-0.299667
chr2	151186188	151186595	151186391	ENSG00000213201.3	+	processed_pseudogene	KNOWN	FABP5P10	1	1	-0.401340
chr2	151247940	151261879	151254909	ENSG00000184898.6	-	protein_coding	KNOWN	RBM43	2	4	-0.074099
chr2	151270465	151290057	151280261	ENSG00000123609.10	-	protein_coding	KNOWN	NMI	4	8	-0.288295
chr2	151357592	151380048	151368820	ENSG00000123610.4	+	protein_coding	KNOWN	TNFAIP6	2	6	-0.254613
chr2	151368334	151368411	151368372	ENSG00000264684.1	+	miRNA	KNOWN	MIR4773-1	1	1	-0.244658
chr2	151372003	151372287	151372145	ENSG00000242113.3	+	misc_RNA	KNOWN	RN7SL124P	1	1	-0.266903
chr2	151409883	151508013	151458948	ENSG00000080345.17	+	protein_coding	KNOWN	RIF1	12	36	-0.173453
chr2	151485336	151734487	151609911	ENSG00000183091.19	-	protein_coding	KNOWN	NEB	20	183	-0.418632
chr2	151788984	151828492	151808738	ENSG00000162980.16	-	protein_coding	KNOWN	ARL5A	7	9	-0.425399
chr2	151832776	152099079	151965927	ENSG00000182389.18	-	protein_coding	KNOWN	CACNB4	10	14	-0.247690
chr2	152098328	152109202	152103765	ENSG00000225214.1	+	antisense	KNOWN	AC079790.2	1	2	-0.149714
chr2	152116801	152175992	152146396	ENSG00000115145.9	-	protein_coding	KNOWN	STAM2	6	14	-0.318182
chr2	152131555	152131845	152131700	ENSG00000234272.1	+	processed_pseudogene	KNOWN	RPL30P2	1	1	-0.411899
chr2	152284350	152284460	152284405	ENSG00000199884.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.177615
chr2	152335237	152649834	152492535	ENSG00000157827.19	+	protein_coding	KNOWN	FMNL2	4	26	-0.024726
chr2	152389937	152390630	152390283	ENSG00000213197.3	+	processed_pseudogene	KNOWN	AC012066.1	1	1	0.045069
chr2	152539197	152539427	152539312	ENSG00000270776.1	-	processed_pseudogene	KNOWN	RP11-17G11.1	1	1	-0.239459
chr2	152651593	152717997	152684795	ENSG00000196504.15	-	protein_coding	KNOWN	PRPF40A	12	26	-0.242488
chr2	152717893	152761253	152739573	ENSG00000177917.10	+	protein_coding	KNOWN	ARL6IP6	5	5	-0.424151
chr2	152850653	152850824	152850738	ENSG00000234932.2	-	processed_pseudogene	KNOWN	AC009969.1	1	1	-0.496637
chr2	152876820	152877767	152877293	ENSG00000226213.1	+	processed_pseudogene	KNOWN	UBQLN4P2	1	1	-0.065549
chr2	153158938	153159683	153159310	ENSG00000214025.2	+	processed_pseudogene	KNOWN	ATP5F1P4	1	1	-0.749310
chr2	153171987	153201726	153186856	ENSG00000224612.1	-	lincRNA	KNOWN	AC011901.2	1	4	-0.637621
chr2	153208086	153208163	153208124	ENSG00000226338.1	-	processed_pseudogene	KNOWN	AC079150.2	1	1	-0.630474
chr2	153337705	153357422	153347563	ENSG00000227708.1	+	lincRNA	KNOWN	AC079150.3	1	4	-0.595384
chr2	153370612	153371064	153370838	ENSG00000214024.2	+	processed_pseudogene	KNOWN	RPL23AP29	1	1	-0.807941
chr2	153420677	153421957	153421317	ENSG00000242575.1	-	transcribed_processed_pseudogene	KNOWN	AC012501.3	1	1	-0.419348
chr2	153421616	153593288	153507452	ENSG00000227400.2	-	sense_overlapping	KNOWN	AC012501.2	3	3	-0.477425
chr2	153446813	153446883	153446848	ENSG00000200377.1	-	snoRNA	NOVEL	SNORD56	1	1	-0.719742
chr2	153477338	153478808	153478073	ENSG00000177519.3	-	protein_coding	KNOWN	RPRM	1	1	-0.290478
chr2	153761450	153762646	153762048	ENSG00000236917.1	-	processed_pseudogene	KNOWN	DNAJA1P2	1	1	-0.806563
chr2	153871913	154453849	154162881	ENSG00000144278.14	+	protein_coding	KNOWN	GALNT13	10	13	-0.689547
chr2	154146105	154146207	154146156	ENSG00000215934.2	-	miRNA	NOVEL	AC008166.1	1	1	-0.861011
chr2	154231718	154231829	154231773	ENSG00000212001.2	+	miRNA	NOVEL	AC009297.1	1	1	-0.515691
chr2	154286589	154287425	154287007	ENSG00000230251.1	+	processed_pseudogene	KNOWN	PHBP4	1	1	-0.525288
chr2	154435853	154457438	154446645	ENSG00000224675.1	-	antisense	KNOWN	AC009227.2	1	5	-0.498395
chr2	154459857	154460820	154460338	ENSG00000238004.1	+	lincRNA	KNOWN	AC009227.3	1	2	-0.539364
chr2	154590407	154590528	154590467	ENSG00000223290.1	+	rRNA	KNOWN	RNA5SP107	1	1	-0.423708
chr2	154696462	154697817	154697139	ENSG00000235949.1	-	antisense	KNOWN	AC061961.2	1	2	-0.469512
chr2	154698299	154858352	154778325	ENSG00000162989.4	+	protein_coding	KNOWN	KCNJ3	3	3	-0.704761
chr2	154940541	154941067	154940804	ENSG00000228837.2	-	processed_pseudogene	KNOWN	CBX3P6	1	1	-0.475897
chr2	154965513	154968003	154966758	ENSG00000230991.1	-	lincRNA	KNOWN	AC092625.1	1	2	-0.512870
chr2	155089439	155089538	155089488	ENSG00000223197.1	-	snRNA	KNOWN	RNU6-1001P	1	1	-0.676061
chr2	155263458	155263724	155263591	ENSG00000232982.1	-	processed_pseudogene	KNOWN	AC092662.2	1	1	-0.808473
chr2	155264163	155264823	155264493	ENSG00000229701.1	-	processed_pseudogene	KNOWN	MTND2P20	1	1	-0.808473
chr2	155269633	155270134	155269883	ENSG00000227682.2	+	transcribed_processed_pseudogene	KNOWN	ATP5A1P2	2	1	-0.786637
chr2	155311023	155311409	155311216	ENSG00000233709.1	+	processed_pseudogene	KNOWN	MTND4P28	1	1	-0.762157
chr2	155311697	155313427	155312562	ENSG00000233039.1	+	processed_pseudogene	KNOWN	MTND5P30	1	1	-0.762157
chr2	155313440	155313958	155313699	ENSG00000233248.1	-	processed_pseudogene	KNOWN	MTND6P9	1	1	-0.762157
chr2	155314066	155314368	155314217	ENSG00000229935.1	+	processed_pseudogene	KNOWN	MTCYBP9	1	1	-0.762157
chr2	155330421	155330527	155330474	ENSG00000206718.1	+	snRNA	KNOWN	RNU6-546P	1	1	-0.436185
chr2	156011617	156024613	156018115	ENSG00000226383.5	-	lincRNA	KNOWN	AC093375.1	2	5	-0.614812
chr2	156033247	156034080	156033663	ENSG00000235548.1	-	processed_pseudogene	KNOWN	AC073551.1	1	1	-0.735429
chr2	156305108	156320255	156312681	ENSG00000282440.1	-	lincRNA	KNOWN	RP11-605B16.1	1	3	-0.511204
chr2	156324432	156342348	156333390	ENSG00000153234.13	-	protein_coding	KNOWN	NR4A2	10	8	-0.123610
chr2	156435290	156613735	156524512	ENSG00000115159.15	+	protein_coding	KNOWN	GPD2	13	19	-0.319007
chr2	156777706	156778372	156778039	ENSG00000238069.1	-	processed_pseudogene	KNOWN	RPLP0P7	1	1	-0.511005
chr2	156932168	156932264	156932216	ENSG00000281222.1	-	miRNA	NOVEL	AC096589.1	1	1	-0.374093
chr2	157015172	157015257	157015214	ENSG00000263848.1	-	miRNA	NOVEL	AC108057.1	1	1	-0.524680
chr2	157210847	157211539	157211193	ENSG00000213194.3	-	processed_pseudogene	KNOWN	AC016732.2	1	1	-0.657200
chr2	157257598	157314211	157285904	ENSG00000136542.8	+	protein_coding	KNOWN	GALNT5	3	10	-0.204141
chr2	157298807	157299158	157298982	ENSG00000222404.1	-	misc_RNA	KNOWN	RN7SKP281	1	1	-0.200985
chr2	157318625	157327713	157323169	ENSG00000136541.14	-	protein_coding	KNOWN	ERMN	9	4	-0.861715
chr2	157379724	157380414	157380069	ENSG00000230562.3	-	processed_pseudogene	KNOWN	FAM133DP	1	1	-0.130401
chr2	157414619	157488961	157451790	ENSG00000115165.9	-	protein_coding	KNOWN	CYTIP	8	9	-0.490497
chr2	157526767	157629005	157577886	ENSG00000123612.15	-	protein_coding	KNOWN	ACVR1C	4	9	-0.559080
chr2	157725708	157736005	157730856	ENSG00000234584.1	-	lincRNA	KNOWN	AC019186.1	1	2	-0.250730
chr2	157736444	157875862	157806153	ENSG00000115170.13	-	protein_coding	KNOWN	ACVR1	10	12	-0.177809
chr2	157876702	158136154	158006428	ENSG00000007001.12	+	protein_coding	KNOWN	UPP2	4	10	-0.361011
chr2	157877683	157878565	157878124	ENSG00000270557.1	+	lincRNA	KNOWN	RP11-546J1.1	1	1	0.024878
chr2	157912772	157912885	157912828	ENSG00000251980.1	+	snRNA	KNOWN	RNU6-436P	1	1	-0.473288
chr2	157917712	157918371	157918041	ENSG00000271320.1	+	lincRNA	KNOWN	RP11-1152H14.1	1	1	-0.473288
chr2	157961410	157962888	157962149	ENSG00000228937.1	-	processed_pseudogene	KNOWN	AC005539.2	1	1	-0.378638
chr2	157985789	157985894	157985841	ENSG00000212410.1	-	snRNA	KNOWN	RNU6-932P	1	1	-0.485437
chr2	158065545	158066059	158065802	ENSG00000231158.1	+	processed_pseudogene	KNOWN	PTP4A1P1	1	1	-0.283517
chr2	158127957	158133988	158130972	ENSG00000237327.1	+	sense_intronic	KNOWN	UPP2-IT1	1	2	-0.499272
chr2	158166650	158236169	158201409	ENSG00000227480.2	+	antisense	KNOWN	CCDC148-AS1	1	5	-0.279396
chr2	158171081	158456753	158313917	ENSG00000153237.17	-	protein_coding	KNOWN	CCDC148	8	15	-0.411559
chr2	158419955	158425303	158422629	ENSG00000234890.1	+	unprocessed_pseudogene	KNOWN	HNRNPDLP2	1	2	-0.258107
chr2	158447166	158447461	158447313	ENSG00000243723.3	-	misc_RNA	KNOWN	RN7SL393P	1	1	-0.341765
chr2	158456964	158682879	158569921	ENSG00000144283.21	+	protein_coding	KNOWN	PKP4	18	25	-0.293057
chr2	158548425	158549224	158548824	ENSG00000227331.1	+	processed_pseudogene	KNOWN	AC005042.2	1	1	-0.354176
chr2	158551490	158552155	158551822	ENSG00000281472.1	-	protein_coding	KNOWN	AC005042.1	1	2	-0.391885
chr2	158658337	158735002	158696669	ENSG00000204380.4	-	antisense	KNOWN	AC005042.4	3	4	-0.090409
chr2	158685903	158753775	158719839	ENSG00000228586.1	+	lincRNA	KNOWN	AC005042.5	1	3	-0.135642
chr2	158703287	158703460	158703373	ENSG00000231675.1	+	processed_pseudogene	KNOWN	AC005042.3	1	1	-0.129222
chr2	158795317	158862958	158829137	ENSG00000163331.10	+	protein_coding	KNOWN	DAPL1	5	5	-0.227853
chr2	158853755	158854576	158854165	ENSG00000243792.1	+	transcribed_unprocessed_pseudogene	KNOWN	OR7E89P	1	1	-0.150369
chr2	158862311	158863285	158862798	ENSG00000251491.2	+	transcribed_unprocessed_pseudogene	KNOWN	OR7E28P	1	1	-0.150369
chr2	158874642	158875670	158875156	ENSG00000188668.4	+	unprocessed_pseudogene	KNOWN	OR7E90P	1	1	-0.094160
chr2	158935798	158935985	158935891	ENSG00000222300.1	-	snRNA	KNOWN	RNU2-21P	1	1	-0.139678
chr2	158968634	159232659	159100646	ENSG00000115183.13	+	protein_coding	KNOWN	TANC1	6	27	0.118478
chr2	159003975	159004320	159004147	ENSG00000213189.5	+	processed_pseudogene	KNOWN	BTF3L4P2	1	1	0.100355
chr2	159027036	159027142	159027089	ENSG00000202029.1	-	snRNA	KNOWN	RNU6-580P	1	1	0.114832
chr2	159056094	159056859	159056476	ENSG00000226878.1	-	processed_pseudogene	KNOWN	GSTM3P2	1	2	0.056543
chr2	159186835	159186901	159186868	ENSG00000275141.1	+	miRNA	KNOWN	MIR6888	1	1	0.333000
chr2	159235793	159286799	159261296	ENSG00000196151.10	-	protein_coding	KNOWN	WDSUB1	5	11	-0.051480
chr2	159318979	159616692	159467835	ENSG00000123636.17	-	protein_coding	KNOWN	BAZ2B	18	37	-0.225804
chr2	159386367	159404636	159395501	ENSG00000223642.7	+	antisense	KNOWN	AC008277.1	5	4	-0.290462
chr2	159444117	159444913	159444515	ENSG00000270893.1	+	processed_pseudogene	KNOWN	RP11-311B14.1	1	1	-0.229936
chr2	159462417	159463256	159462836	ENSG00000225369.1	-	processed_pseudogene	KNOWN	AC009506.2	1	1	-0.154802
chr2	159536244	159536346	159536295	ENSG00000207117.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.338248
chr2	159615296	159617082	159616189	ENSG00000224152.1	+	antisense	KNOWN	AC009506.1	1	2	-0.144306
chr2	159670708	159712435	159691571	ENSG00000226266.6	-	lincRNA	KNOWN	AC009961.3	3	3	-0.013354
chr2	159689217	159690291	159689754	ENSG00000230783.1	-	processed_pseudogene	KNOWN	AC009961.2	1	2	0.053561
chr2	159712457	159771027	159741742	ENSG00000136536.14	+	protein_coding	KNOWN	MARCH7	9	12	0.050449
chr2	159768630	159798255	159783442	ENSG00000241399.6	-	protein_coding	KNOWN	CD302	4	7	-0.324017
chr2	159771851	159904710	159838280	ENSG00000248672.5	-	protein_coding	KNOWN	LY75-CD302	2	39	-0.360623
chr2	159803355	159904749	159854052	ENSG00000054219.10	-	protein_coding	KNOWN	LY75	4	35	-0.378455
chr2	159812234	159814009	159813121	ENSG00000227055.1	-	processed_pseudogene	KNOWN	AC009961.5	1	2	-0.353419
chr2	159932006	160062610	159997308	ENSG00000153246.11	-	protein_coding	KNOWN	PLA2R1	3	30	-0.151258
chr2	160099666	160271888	160185777	ENSG00000115221.10	-	protein_coding	KNOWN	ITGB6	11	16	-0.024585
chr2	160272151	160493794	160382972	ENSG00000153250.17	-	protein_coding	KNOWN	RBMS1	15	16	0.033757
chr2	160407810	160407882	160407846	ENSG00000263948.1	-	miRNA	KNOWN	MIR4785	1	1	0.159896
chr2	160849313	160850676	160849994	ENSG00000279844.1	-	TEC	KNOWN	RP11-20F18.1	1	1	-0.008499
chr2	160877547	160877850	160877698	ENSG00000244372.3	+	misc_RNA	KNOWN	RN7SL423P	1	1	-0.350718
chr2	161048606	161050546	161049576	ENSG00000232337.1	-	processed_pseudogene	KNOWN	AC009313.2	1	1	0.111925
chr2	161096231	161160224	161128227	ENSG00000224467.1	-	antisense	KNOWN	AC009313.1	1	3	-0.332260
chr2	161136908	161236221	161186564	ENSG00000136560.13	+	protein_coding	KNOWN	TANK	23	9	-0.369644
chr2	161222785	161308303	161265544	ENSG00000235724.8	-	antisense	KNOWN	AC009299.2	9	6	-0.373147
chr2	161244739	161249050	161246894	ENSG00000227403.1	+	lincRNA	KNOWN	AC009299.3	2	3	-0.644974
chr2	161281902	161282618	161282260	ENSG00000225813.1	+	processed_pseudogene	KNOWN	AC009299.4	1	1	-0.376235
chr2	161308038	161411717	161359877	ENSG00000115233.11	+	protein_coding	KNOWN	PSMD14	5	12	-0.235097
chr2	161340816	161341326	161341071	ENSG00000232320.6	-	processed_pseudogene	KNOWN	AC009299.5	1	1	-0.152812
chr2	161350217	161350360	161350288	ENSG00000221590.1	-	miRNA	NOVEL	AC009299.1	1	1	-0.090385
chr2	161409554	161409670	161409612	ENSG00000271924.1	+	rRNA	KNOWN	RNA5SP108	1	1	-0.566971
chr2	161416094	161425870	161420982	ENSG00000136535.14	+	protein_coding	KNOWN	TBR1	6	6	-0.045512
chr2	161422659	161423577	161423118	ENSG00000224076.5	-	antisense	KNOWN	AC009487.4	2	2	-0.045512
chr2	161424015	161428774	161426394	ENSG00000251621.1	+	3prime_overlapping_ncrna	KNOWN	AC009487.5	1	2	-0.045512
chr2	161424332	161985282	161704807	ENSG00000144290.16	+	protein_coding	KNOWN	SLC4A10	12	27	-0.650643
chr2	161433874	161437458	161435666	ENSG00000280105.1	+	TEC	KNOWN	RP11-334E15.1	1	1	-0.602382
chr2	161500885	161507705	161504295	ENSG00000226121.2	-	processed_pseudogene	KNOWN	AC009487.6	1	1	-0.647945
chr2	161558544	161558646	161558595	ENSG00000238570.1	+	snoRNA	NOVEL	snoU13	1	1	-0.554000
chr2	161568502	161570185	161569343	ENSG00000226946.1	-	processed_pseudogene	KNOWN	AC062022.1	1	1	-0.555576
chr2	161580072	161581350	161580711	ENSG00000235716.1	+	processed_pseudogene	KNOWN	KRT18P46	1	1	-0.568259
chr2	161893892	161893949	161893920	ENSG00000274743.1	+	miRNA	NOVEL	AC092841.2	1	1	-0.558859
chr2	161918782	161918866	161918824	ENSG00000253046.1	+	miRNA	NOVEL	AC092841.1	1	1	-0.406997
chr2	161931199	161931466	161931332	ENSG00000234732.1	-	processed_pseudogene	KNOWN	RPEP5	1	1	-0.579385
chr2	161992241	162074542	162033391	ENSG00000197635.9	-	protein_coding	KNOWN	DPP4	11	27	-0.208929
chr2	162073256	162075169	162074212	ENSG00000230918.1	+	antisense	KNOWN	AC008063.2	1	3	0.121739
chr2	162077357	162077651	162077504	ENSG00000231445.1	-	processed_pseudogene	KNOWN	TIMM8AP1	1	1	0.121739
chr2	162088259	162090072	162089165	ENSG00000224674.1	+	processed_pseudogene	KNOWN	EIF3EP2	1	1	0.116127
chr2	162093429	162094854	162094141	ENSG00000233397.1	+	lincRNA	KNOWN	AC008063.3	1	2	-0.017633
chr2	162121731	162121816	162121773	ENSG00000274689.1	-	miRNA	NOVEL	AC007750.1	1	1	-0.226084
chr2	162142873	162152404	162147638	ENSG00000115263.14	-	protein_coding	KNOWN	GCG	5	6	-0.494357
chr2	162159762	162173223	162166492	ENSG00000236841.7	+	antisense	KNOWN	AC007750.5	2	4	-0.461290
chr2	162170684	162245151	162207917	ENSG00000078098.13	-	protein_coding	KNOWN	FAP	14	26	-0.221603
chr2	162267079	162318703	162292891	ENSG00000115267.5	-	protein_coding	KNOWN	IFIH1	3	16	-0.378084
chr2	162318840	162371595	162345217	ENSG00000115271.10	+	protein_coding	KNOWN	GCA	10	8	-0.531700
chr2	162371407	162838730	162605068	ENSG00000184611.11	-	protein_coding	KNOWN	KCNH7	5	16	-0.616130
chr2	162496936	162497051	162496993	ENSG00000212312.1	+	rRNA	KNOWN	RNA5SP109	1	1	-0.534681
chr2	162768936	162797972	162783454	ENSG00000237750.2	+	antisense	KNOWN	AC007740.1	1	5	-0.693621
chr2	163152251	163153307	163152779	ENSG00000230282.1	-	processed_pseudogene	KNOWN	RPL7P61	1	2	-0.406997
chr2	163288995	163289096	163289045	ENSG00000200902.1	+	snRNA	KNOWN	RNU6-627P	1	1	-0.865944
chr2	163593396	163736012	163664704	ENSG00000182263.13	-	protein_coding	KNOWN	FIGN	3	3	-0.465896
chr2	163749573	164352223	164050898	ENSG00000237844.1	-	lincRNA	KNOWN	AC092684.1	1	5	-0.584768
chr2	164213539	164214414	164213976	ENSG00000226847.1	+	processed_pseudogene	KNOWN	PRPS1P1	1	1	-1.065549
chr2	164321933	164322223	164322078	ENSG00000229641.1	+	processed_pseudogene	KNOWN	CYP2C56P	1	1	-0.943198
chr2	164423525	164423606	164423565	ENSG00000264074.1	+	miRNA	NOVEL	AC110086.1	1	1	-0.717325
chr2	164492812	164621848	164557330	ENSG00000115290.9	-	protein_coding	KNOWN	GRB14	6	14	-0.608409
chr2	164573741	164574054	164573897	ENSG00000277998.1	+	unprocessed_pseudogene	KNOWN	RP11-452N17.1	1	1	-0.304430
chr2	164653624	164843679	164748651	ENSG00000082438.15	-	protein_coding	KNOWN	COBLL1	25	17	-0.377377
chr2	164687287	164687596	164687441	ENSG00000224331.2	-	processed_pseudogene	KNOWN	AC019181.3	1	1	-0.477374
chr2	164687643	164687777	164687710	ENSG00000206869.1	-	snoRNA	KNOWN	SNORA70F	1	1	-0.477374
chr2	164840749	164849334	164845041	ENSG00000233255.1	+	antisense	KNOWN	AC019181.2	1	2	-0.103139
chr2	164858432	164858546	164858489	ENSG00000199508.1	+	rRNA	KNOWN	RNA5SP110	1	1	0.065840
chr2	164895677	164895777	164895727	ENSG00000223318.1	-	rRNA	KNOWN	RNA5SP111	1	1	-0.110114
chr2	164896186	164955525	164925855	ENSG00000169507.9	-	protein_coding	KNOWN	SLC38A11	10	13	-0.404692
chr2	164912312	165208261	165060286	ENSG00000236283.3	+	antisense	KNOWN	AC013463.2	8	8	-0.521518
chr2	165087522	165204067	165145794	ENSG00000153253.15	-	protein_coding	KNOWN	SCN3A	8	28	-0.531738
chr2	165239402	165392310	165315856	ENSG00000136531.13	+	protein_coding	KNOWN	SCN2A	7	27	-0.662939
chr2	165285253	165286048	165285650	ENSG00000233204.1	+	processed_pseudogene	KNOWN	MAPRE1P3	1	1	-0.959355
chr2	165469647	165689407	165579527	ENSG00000178662.15	+	protein_coding	KNOWN	CSRNP3	6	7	-0.593171
chr2	165747591	165794682	165771136	ENSG00000115339.13	-	protein_coding	KNOWN	GALNT3	9	11	-0.598004
chr2	165794851	165810010	165802430	ENSG00000235192.1	+	lincRNA	KNOWN	AC009495.2	1	3	-0.409690
chr2	165794857	165846091	165820474	ENSG00000229195.1	-	lincRNA	KNOWN	AC009495.4	1	2	-0.446012
chr2	165814215	165814354	165814284	ENSG00000221234.1	+	miRNA	NOVEL	AC009495.1	1	1	-0.317529
chr2	165833048	165839098	165836073	ENSG00000232411.1	-	lincRNA	KNOWN	AC009495.3	1	3	-0.639812
chr2	165857475	165953843	165905659	ENSG00000123607.14	-	protein_coding	KNOWN	TTC21B	8	29	-0.425251
chr2	165933857	165949891	165941874	ENSG00000224490.5	+	processed_transcript	KNOWN	TTC21B-AS1	3	5	-0.588251
chr2	165957399	166301784	166129591	ENSG00000236107.7	+	antisense	KNOWN	AC010127.3	13	12	-0.567146
chr2	165989160	166128047	166058603	ENSG00000144285.15	-	protein_coding	KNOWN	SCN1A	9	28	-0.713237
chr2	166123494	166123597	166123545	ENSG00000238813.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.642275
chr2	166180652	166180966	166180809	ENSG00000222376.1	-	misc_RNA	KNOWN	RN7SKP152	1	1	-0.644974
chr2	166195185	166375993	166285589	ENSG00000169432.14	-	protein_coding	KNOWN	SCN9A	6	27	-0.412816
chr2	166403573	166494247	166448910	ENSG00000136546.13	-	protein_coding	KNOWN	SCN7A	7	26	-0.476902
chr2	166888487	167259753	167074120	ENSG00000163092.19	+	protein_coding	KNOWN	XIRP2	7	11	-0.594864
chr2	166889502	166889884	166889693	ENSG00000225182.1	-	processed_pseudogene	KNOWN	AC092601.1	1	1	-0.947537
chr2	167123904	167140955	167132429	ENSG00000254552.1	-	antisense	KNOWN	XIRP2-AS1	1	2	-0.393598
chr2	167293171	167558333	167425752	ENSG00000228222.1	+	lincRNA	KNOWN	AC074363.1	1	3	-0.616956
chr2	167631480	167631541	167631510	ENSG00000238357.1	-	snRNA	KNOWN	RNU7-148P	1	1	-1.045512
chr2	167713663	167716065	167714864	ENSG00000214211.2	-	processed_pseudogene	KNOWN	CTAGE14P	1	1	-0.525761
chr2	167814774	167941144	167877959	ENSG00000235335.2	-	antisense	KNOWN	AC016723.4	2	5	-0.303155
chr2	167868948	167874041	167871494	ENSG00000172318.5	+	protein_coding	KNOWN	B3GALT1	1	1	-0.346574
chr2	167954020	168248141	168101080	ENSG00000198648.10	-	protein_coding	KNOWN	STK39	3	18	-0.249130
chr2	168231921	168232220	168232070	ENSG00000238259.1	-	processed_pseudogene	KNOWN	AC067940.1	1	1	-0.059126
chr2	168451324	168451606	168451465	ENSG00000241074.3	+	misc_RNA	KNOWN	RN7SL813P	1	1	-0.175781
chr2	168455862	168775137	168615499	ENSG00000172292.14	+	protein_coding	KNOWN	CERS6	2	11	-0.271458
chr2	168582943	168583018	168582980	ENSG00000265694.1	+	miRNA	KNOWN	MIR4774	1	1	0.055696
chr2	168606390	168606496	168606443	ENSG00000199348.1	-	snRNA	KNOWN	RNU6-766P	1	1	-0.256736
chr2	168771953	168786961	168779457	ENSG00000227617.8	-	processed_transcript	KNOWN	CERS6-AS1	11	6	-0.340968
chr2	168786539	168865514	168826026	ENSG00000163072.14	+	protein_coding	KNOWN	NOSTRIN	14	21	-0.299495
chr2	168834132	168913371	168873751	ENSG00000152253.8	-	protein_coding	KNOWN	SPC25	4	7	-0.361823
chr2	168901240	168910000	168905620	ENSG00000152254.10	+	protein_coding	KNOWN	G6PC2	5	5	-0.577875
chr2	168922938	169031322	168977130	ENSG00000073734.8	-	protein_coding	KNOWN	ABCB11	3	28	-0.503458
chr2	169064789	169096167	169080478	ENSG00000073737.16	+	protein_coding	KNOWN	DHRS9	8	8	-0.479383
chr2	169100743	169101210	169100976	ENSG00000235321.1	+	antisense	KNOWN	AC007556.3	1	2	-0.369235
chr2	169115195	169115680	169115437	ENSG00000235995.1	+	processed_pseudogene	KNOWN	UBE2V1P6	1	2	-0.067207
chr2	169127109	169362685	169244897	ENSG00000081479.12	-	protein_coding	KNOWN	LRP2	5	79	-0.400195
chr2	169479178	169506655	169492916	ENSG00000163093.11	+	protein_coding	KNOWN	BBS5	6	12	-0.342509
chr2	169479480	169525922	169502701	ENSG00000251569.1	+	protein_coding	KNOWN	RP11-724O16.1	1	16	-0.276846
chr2	169509702	169526262	169517982	ENSG00000239474.6	+	protein_coding	KNOWN	KLHL41	3	6	-0.171066
chr2	169529749	169573875	169551812	ENSG00000138399.17	-	protein_coding	KNOWN	FASTKD1	10	15	-0.150515
chr2	169577371	169577746	169577558	ENSG00000229827.1	-	processed_pseudogene	KNOWN	AC093899.3	1	1	-0.169336
chr2	169584340	169641406	169612873	ENSG00000138398.15	+	protein_coding	KNOWN	PPIG	11	14	-0.153048
chr2	169645425	169694433	169669929	ENSG00000154479.12	-	protein_coding	KNOWN	CCDC173	3	9	-0.290143
chr2	169658132	169661357	169659744	ENSG00000226072.1	-	processed_pseudogene	KNOWN	AC016772.4	1	3	-0.028302
chr2	169694454	169701708	169698081	ENSG00000144362.11	+	protein_coding	KNOWN	PHOSPHO2	8	5	-0.115700
chr2	169694488	169776989	169735738	ENSG00000213160.9	+	protein_coding	KNOWN	KLHL23	7	6	-0.148075
chr2	169727872	169728003	169727937	ENSG00000206961.1	+	snoRNA	NOVEL	SNORA51	1	1	0.014916
chr2	169767185	169768799	169767992	ENSG00000231550.1	-	processed_pseudogene	KNOWN	PTCHD3P2	1	2	-0.461944
chr2	169790093	169790885	169790489	ENSG00000214369.2	+	processed_pseudogene	KNOWN	AC009967.3	1	1	-0.007544
chr2	169791933	169812064	169801998	ENSG00000138385.15	+	protein_coding	KNOWN	SSB	12	12	-0.028859
chr2	169810081	169824931	169817506	ENSG00000138382.13	-	protein_coding	KNOWN	METTL5	13	10	-0.215332
chr2	169827458	170084131	169955794	ENSG00000144357.16	+	protein_coding	KNOWN	UBR3	11	39	-0.242343
chr2	170077224	170078294	170077759	ENSG00000227176.1	-	processed_pseudogene	KNOWN	AC092641.2	1	2	-0.402773
chr2	170119996	170120098	170120047	ENSG00000252807.1	-	snRNA	KNOWN	RNU6-1006P	1	1	-0.246810
chr2	170178145	170655171	170416658	ENSG00000071909.18	+	protein_coding	KNOWN	MYO3B	9	35	-0.380480
chr2	170332085	170408564	170370324	ENSG00000231898.8	-	antisense	KNOWN	AC012594.1	73	6	-0.458196
chr2	170601662	170602228	170601945	ENSG00000214821.4	-	processed_pseudogene	KNOWN	HMGB1P4	1	1	-0.619148
chr2	170640374	170695374	170667874	ENSG00000213981.8	-	antisense	KNOWN	AC007277.3	1	10	-0.282470
chr2	170690564	170690742	170690653	ENSG00000275414.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.099307
chr2	170712451	170714567	170713509	ENSG00000222033.1	-	lincRNA	KNOWN	LINC01124	1	1	0.010050
chr2	170715351	170718078	170716714	ENSG00000204335.3	+	protein_coding	KNOWN	SP5	2	2	0.010050
chr2	170723086	170770768	170746927	ENSG00000234350.4	-	lincRNA	KNOWN	AC007405.4	5	7	-0.309754
chr2	170751805	170752788	170752296	ENSG00000128692.8	+	processed_pseudogene	KNOWN	EIF2S2P4	1	1	-0.241618
chr2	170771113	170778148	170774630	ENSG00000239467.5	+	lincRNA	KNOWN	AC007405.6	2	5	0.031024
chr2	170783167	170783271	170783219	ENSG00000222509.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.031024
chr2	170783786	170798971	170791378	ENSG00000204334.7	+	protein_coding	KNOWN	ERICH2	1	5	-0.463605
chr2	170813213	170861151	170837182	ENSG00000128683.13	+	protein_coding	KNOWN	GAD1	17	18	-0.037402
chr2	170816293	170818037	170817165	ENSG00000235934.1	-	antisense	KNOWN	AC007405.8	3	3	0.055696
chr2	170916209	170916294	170916251	ENSG00000266020.1	+	miRNA	NOVEL	AC010092.1	1	1	-0.404161
chr2	170928464	170967129	170947796	ENSG00000115806.12	+	protein_coding	KNOWN	GORASP2	11	11	-0.079078
chr2	170990823	171231314	171111068	ENSG00000198586.13	-	protein_coding	KNOWN	TLK1	12	23	-0.102339
chr2	171317405	171434802	171376103	ENSG00000123600.18	-	protein_coding	KNOWN	METTL8	17	10	-0.087370
chr2	171374931	171375278	171375104	ENSG00000224553.1	-	processed_pseudogene	KNOWN	AC008065.1	1	1	-0.286520
chr2	171434217	171485052	171459634	ENSG00000115827.13	+	protein_coding	KNOWN	DCAF17	12	14	-0.059089
chr2	171491422	171491931	171491676	ENSG00000228507.1	+	processed_pseudogene	KNOWN	DAP3P2	1	1	-0.084506
chr2	171492905	171493095	171493000	ENSG00000234061.1	+	processed_pseudogene	KNOWN	AC007969.4	1	1	-0.084506
chr2	171517270	171517716	171517493	ENSG00000233762.3	-	processed_pseudogene	KNOWN	AC007969.5	1	1	0.002724
chr2	171522247	171558133	171540190	ENSG00000071967.11	+	protein_coding	KNOWN	CYBRD1	7	4	0.126752
chr2	171587093	171587259	171587176	ENSG00000233934.2	+	processed_pseudogene	KNOWN	RPL21P38	1	1	0.246438
chr2	171687409	171748420	171717914	ENSG00000077380.15	+	protein_coding	KNOWN	DYNC1I2	25	18	-0.075880
chr2	171784370	171999859	171892114	ENSG00000115840.13	-	protein_coding	KNOWN	SLC25A12	10	18	0.067707
chr2	171856566	171856670	171856618	ENSG00000252779.1	-	snRNA	KNOWN	RNU6-182P	1	1	0.075872
chr2	171922448	171983682	171953065	ENSG00000128708.12	+	protein_coding	KNOWN	HAT1	6	11	-0.089460
chr2	171999583	172082430	172041006	ENSG00000172878.13	+	protein_coding	KNOWN	METAP1D	7	10	0.133133
chr2	172084740	172089677	172087208	ENSG00000144355.14	+	protein_coding	KNOWN	DLX1	7	4	0.064335
chr2	172099439	172102900	172101169	ENSG00000115844.10	-	protein_coding	KNOWN	DLX2	2	3	0.150586
chr2	172103006	172109982	172106494	ENSG00000236651.1	+	lincRNA	KNOWN	DLX2-AS1	1	5	0.150586
chr2	172315287	172323737	172319512	ENSG00000232555.1	+	lincRNA	KNOWN	AC104088.1	1	2	0.261917
chr2	172411513	172411632	172411572	ENSG00000281212.1	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.085546
chr2	172423807	172424173	172423990	ENSG00000278924.1	-	TEC	KNOWN	RP11-227L6.1	1	1	-0.085546
chr2	172427354	172506282	172466818	ENSG00000091409.14	+	protein_coding	KNOWN	ITGA6	11	26	0.077130
chr2	172427774	172428603	172428188	ENSG00000226963.1	-	antisense	KNOWN	AC078883.4	1	2	-0.085546
chr2	172464262	172466022	172465142	ENSG00000232788.1	-	antisense	KNOWN	AC078883.3	2	2	0.249533
chr2	172480840	172556596	172518718	ENSG00000225205.5	-	antisense	KNOWN	AC093818.1	5	4	0.090737
chr2	172555373	172608669	172582021	ENSG00000152256.13	+	protein_coding	KNOWN	PDK1	9	12	-0.077709
chr2	172558151	172558252	172558201	ENSG00000199866.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.236002
chr2	172674212	172674898	172674555	ENSG00000230104.1	-	processed_pseudogene	KNOWN	AC018712.2	1	1	-0.330540
chr2	172677141	172736206	172706673	ENSG00000228016.1	-	antisense	KNOWN	RAPGEF4-AS1	3	4	-0.046646
chr2	172691299	172691402	172691350	ENSG00000239041.1	+	snoRNA	NOVEL	snoU13	1	1	0.025564
chr2	172735274	173052893	172894083	ENSG00000091428.17	+	protein_coding	KNOWN	RAPGEF4	15	31	-0.063641
chr2	172893763	172894383	172894073	ENSG00000232292.1	-	processed_pseudogene	KNOWN	ALDH7A1P2	1	1	0.043629
chr2	173061732	173061812	173061772	ENSG00000265709.1	+	miRNA	NOVEL	AC019046.1	1	1	0.091992
chr2	173075435	173268010	173171722	ENSG00000091436.16	+	protein_coding	KNOWN	AC013461.1	8	20	-0.124396
chr2	173166446	173282036	173224241	ENSG00000238133.6	-	antisense	KNOWN	MLK7-AS1	3	8	-0.205823
chr2	173297629	173298512	173298070	ENSG00000231735.1	+	processed_pseudogene	KNOWN	RP11-1O7.1	1	1	-0.393435
chr2	173338219	173356208	173347213	ENSG00000236391.3	-	transcribed_processed_pseudogene	KNOWN	AC092573.2	2	2	-0.482478
chr2	173354820	173368997	173361908	ENSG00000144354.13	+	protein_coding	KNOWN	CDCA7	8	10	-0.174182
chr2	173431349	173431812	173431580	ENSG00000213148.3	-	processed_pseudogene	KNOWN	AC073465.1	1	1	-0.243077
chr2	173477996	173478400	173478198	ENSG00000236832.1	-	processed_pseudogene	KNOWN	AC073465.2	1	1	-0.373672
chr2	173485865	173486362	173486113	ENSG00000226131.1	-	processed_pseudogene	KNOWN	AC073465.3	1	1	-0.373672
chr2	173575110	173576341	173575725	ENSG00000237016.1	-	processed_pseudogene	KNOWN	AC013410.1	1	1	-0.222519
chr2	173705948	173706148	173706048	ENSG00000237617.1	-	processed_pseudogene	KNOWN	AC013410.2	1	1	-0.496377
chr2	173811076	173811392	173811234	ENSG00000270460.1	+	lincRNA	KNOWN	RP11-796E10.1	1	1	0.022867
chr2	173871653	173872465	173872059	ENSG00000234415.1	-	processed_pseudogene	KNOWN	RPL5P7	1	1	0.179015
chr2	173880865	173899428	173890146	ENSG00000224638.1	-	lincRNA	KNOWN	AC106900.6	1	4	0.080167
chr2	173906459	173965702	173936080	ENSG00000172845.13	-	protein_coding	KNOWN	SP3	7	7	-0.247909
chr2	173968351	173969418	173968884	ENSG00000271151.1	+	lincRNA	KNOWN	RP11-394I13.2	1	1	-0.193410
chr2	174011856	174012975	174012415	ENSG00000273258.1	-	lincRNA	KNOWN	RP11-394I13.3	1	2	-0.144769
chr2	174025280	174027163	174026221	ENSG00000260868.1	+	lincRNA	KNOWN	RP11-394I13.1	1	1	-0.144769
chr2	174043008	174043880	174043444	ENSG00000235414.3	+	processed_pseudogene	KNOWN	RPSAP24	1	1	0.144733
chr2	174072447	174248698	174160572	ENSG00000138430.15	-	protein_coding	KNOWN	OLA1	9	11	-0.336732
chr2	174171891	174172725	174172308	ENSG00000270799.1	+	processed_pseudogene	KNOWN	RP11-451F14.1	1	1	-0.386662
chr2	174240143	174240457	174240300	ENSG00000243770.3	-	misc_RNA	KNOWN	RN7SL65P	1	1	-0.268303
chr2	174264878	174264981	174264929	ENSG00000201088.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.098339
chr2	174299324	174300956	174300140	ENSG00000227180.1	-	processed_pseudogene	KNOWN	AC013467.1	1	2	-0.249565
chr2	174310015	174310974	174310494	ENSG00000237804.1	-	processed_pseudogene	KNOWN	HNRNPA1P39	1	1	-0.303937
chr2	174326027	174330643	174328335	ENSG00000231453.1	+	lincRNA	KNOWN	LINC01305	2	3	-0.221822
chr2	174334438	174337566	174336002	ENSG00000280414.1	-	TEC	KNOWN	RP11-572N21.1	1	1	0.284637
chr2	174334946	174338492	174336719	ENSG00000217236.1	+	protein_coding	KNOWN	SP9	1	2	0.284637
chr2	174348022	174395715	174371868	ENSG00000138433.15	-	protein_coding	KNOWN	CIR1	5	10	-0.023633
chr2	174395730	174429575	174412652	ENSG00000144306.13	+	protein_coding	KNOWN	SCRN3	15	9	-0.216423
chr2	174431571	174487094	174459332	ENSG00000163328.13	-	protein_coding	KNOWN	GPR155	6	17	-0.172464
chr2	174487389	174488386	174487887	ENSG00000226853.2	+	lincRNA	KNOWN	AC010894.3	3	2	-0.463527
chr2	174501952	174502312	174502132	ENSG00000179997.8	+	processed_pseudogene	KNOWN	AC010894.4	1	1	-0.207568
chr2	174545385	174546335	174545860	ENSG00000279884.1	-	TEC	KNOWN	RP11-483E17.1	1	1	0.046188
chr2	174547141	174774827	174660984	ENSG00000236449.1	+	antisense	KNOWN	AC018890.6	2	4	0.012739
chr2	174557966	174558072	174558019	ENSG00000206965.1	-	snRNA	KNOWN	RNU6-5P	1	1	0.214476
chr2	174559572	174682916	174621244	ENSG00000115935.16	-	protein_coding	KNOWN	WIPF1	18	9	-0.007923
chr2	174575227	174587726	174581476	ENSG00000237798.1	+	antisense	KNOWN	AC010894.5	1	2	-0.206920
chr2	174719908	174720318	174720113	ENSG00000235655.3	+	processed_pseudogene	KNOWN	H3F3AP4	1	1	-0.029570
chr2	174747592	174764472	174756032	ENSG00000138435.14	-	protein_coding	KNOWN	CHRNA1	6	10	0.195525
chr2	174783046	174787928	174785487	ENSG00000237104.1	-	lincRNA	KNOWN	AC018890.4	1	2	-0.116451
chr2	174799363	175005369	174902366	ENSG00000128656.13	-	protein_coding	KNOWN	CHN1	18	13	-0.225147
chr2	174977803	174977897	174977850	ENSG00000281373.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.234112
chr2	175022214	175022319	175022266	ENSG00000212167.1	+	snRNA	KNOWN	RNU6-763P	1	1	-0.260797
chr2	175029769	175029877	175029823	ENSG00000199827.1	+	snRNA	KNOWN	RNU6-1290P	1	1	-0.260797
chr2	175033778	175034192	175033985	ENSG00000227187.1	-	processed_pseudogene	KNOWN	RP11-6C10.1	1	1	-0.029472
chr2	175034517	175034590	175034553	ENSG00000266510.1	-	miRNA	NOVEL	AC007435.1	1	1	-0.029472
chr2	175072250	175168382	175120316	ENSG00000115966.16	-	protein_coding	KNOWN	ATF2	21	17	-0.357018
chr2	175092401	175092587	175092494	ENSG00000277948.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.574452
chr2	175167633	175167709	175167671	ENSG00000215973.1	-	miRNA	KNOWN	MIR933	1	1	-0.329305
chr2	175167904	175168522	175168213	ENSG00000229750.1	+	antisense	KNOWN	AC096649.2	1	2	-0.329305
chr2	175176258	175184607	175180432	ENSG00000154518.9	-	protein_coding	KNOWN	ATP5G3	5	5	-0.295031
chr2	175176493	175176586	175176539	ENSG00000200121.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.295031
chr2	175184215	175184607	175184411	ENSG00000233131.1	+	processed_pseudogene	KNOWN	AC096649.1	1	1	-0.295031
chr2	175257250	175454640	175355945	ENSG00000229066.1	+	lincRNA	KNOWN	AC096649.3	2	3	-0.439706
chr2	175330373	175330472	175330422	ENSG00000221347.1	+	miRNA	NOVEL	AC096649.4	1	1	-0.513036
chr2	175842887	175843302	175843094	ENSG00000223976.1	+	processed_pseudogene	KNOWN	EXTL2P1	1	1	-0.273961
chr2	175897336	175904232	175900784	ENSG00000235047.1	+	antisense	KNOWN	AC016751.3	1	2	-0.424799
chr2	175904371	175905502	175904936	ENSG00000229779.1	-	lincRNA	KNOWN	AC016751.2	1	2	-0.424799
chr2	175923892	176002839	175963365	ENSG00000144320.13	-	protein_coding	KNOWN	KIAA1715	12	14	-0.538441
chr2	176077472	176083913	176080692	ENSG00000174279.4	-	protein_coding	KNOWN	EVX2	1	3	0.034659
chr2	176092891	176095938	176094414	ENSG00000128714.5	+	protein_coding	KNOWN	HOXD13	1	2	0.408465
chr2	176099730	176101193	176100461	ENSG00000170178.6	+	protein_coding	KNOWN	HOXD12	2	2	0.408465
chr2	176104216	176109754	176106985	ENSG00000128713.12	+	protein_coding	KNOWN	HOXD11	3	4	0.408465
chr2	176108790	176119942	176114366	ENSG00000128710.5	+	protein_coding	KNOWN	HOXD10	3	3	0.403266
chr2	176121611	176137098	176129354	ENSG00000237380.6	-	antisense	KNOWN	HOXD-AS2	2	4	0.245295
chr2	176122720	176124937	176123828	ENSG00000128709.11	+	protein_coding	KNOWN	HOXD9	2	4	0.402634
chr2	176125773	176125910	176125841	ENSG00000281719.1	-	miRNA	NOVEL	AC009336.1	1	1	0.402634
chr2	176129694	176132695	176131194	ENSG00000175879.8	+	protein_coding	KNOWN	HOXD8	4	4	0.094272
chr2	176136612	176173102	176154857	ENSG00000128652.11	+	protein_coding	KNOWN	HOXD3	4	3	0.138601
chr2	176150303	176150412	176150357	ENSG00000207744.1	+	miRNA	KNOWN	MIR10B	1	1	0.218210
chr2	176151085	176173097	176162091	ENSG00000278500.1	+	protein_coding	KNOWN	AC009336.19	1	4	0.182888
chr2	176151222	176153226	176152224	ENSG00000170166.5	+	protein_coding	KNOWN	HOXD4	1	2	0.218210
chr2	176164164	176165716	176164940	ENSG00000272729.1	-	antisense	KNOWN	RP11-387A1.5	1	1	0.218210
chr2	176173195	176188958	176181076	ENSG00000224189.6	-	antisense	KNOWN	HAGLR	12	5	-0.032763
chr2	176177717	176179008	176178362	ENSG00000226363.3	+	lincRNA	KNOWN	HAGLROS	1	2	-0.032763
chr2	176188579	176190907	176189743	ENSG00000128645.12	+	protein_coding	KNOWN	HOXD1	1	2	-0.197173
chr2	176188843	176188901	176188872	ENSG00000277284.1	+	miRNA	KNOWN	MIR7704	1	1	-0.032763
chr2	176189919	176192538	176191228	ENSG00000279160.1	-	TEC	KNOWN	RP11-387A1.6	1	1	-0.441414
chr2	176200908	176201252	176201080	ENSG00000218175.2	-	processed_pseudogene	KNOWN	AC016739.2	1	1	-0.454290
chr2	176242111	176242993	176242552	ENSG00000230384.1	+	processed_pseudogene	KNOWN	RPSAP25	1	1	-0.474210
chr2	176269395	176338025	176303710	ENSG00000128654.13	+	protein_coding	KNOWN	MTX2	5	11	-0.380209
chr2	176270241	176270330	176270285	ENSG00000264392.2	-	miRNA	NOVEL	AC016739.1	1	1	-0.450019
chr2	176338637	176339077	176338857	ENSG00000237260.1	+	processed_pseudogene	KNOWN	AC073069.2	1	1	-0.605445
chr2	176382232	176382332	176382282	ENSG00000265186.1	-	miRNA	NOVEL	AC068706.2	1	1	-0.636204
chr2	176383427	176383576	176383501	ENSG00000221304.1	-	miRNA	NOVEL	AC068706.1	1	1	-0.636204
chr2	176506245	176507702	176506973	ENSG00000229434.1	-	lincRNA	KNOWN	AC017048.1	1	2	-0.052398
chr2	176524879	176531683	176528281	ENSG00000236231.1	-	lincRNA	KNOWN	AC017048.2	1	4	-0.424378
chr2	176611437	176612249	176611843	ENSG00000272551.1	-	lincRNA	KNOWN	RP11-324L17.1	1	1	-0.151122
chr2	176629589	176637931	176633760	ENSG00000163364.9	-	lincRNA	KNOWN	LINC01116	2	4	-0.182045
chr2	176637710	176655958	176646834	ENSG00000224577.1	+	lincRNA	KNOWN	LINC01117	1	4	-0.234741
chr2	176664676	176664766	176664721	ENSG00000252027.1	+	snRNA	KNOWN	RNU6ATAC14P	1	1	-0.340119
chr2	176724268	176819310	176771789	ENSG00000230552.5	-	lincRNA	KNOWN	AC092162.1	4	6	-0.399641
chr2	176804987	176806337	176805662	ENSG00000237053.1	-	processed_pseudogene	KNOWN	FUCA1P1	1	1	-0.537365
chr2	176809426	176809859	176809642	ENSG00000223777.1	-	processed_pseudogene	KNOWN	AC092162.2	1	1	-0.537365
chr2	176822030	176823653	176822841	ENSG00000279205.1	+	TEC	KNOWN	RP11-632P5.1	1	1	-0.218030
chr2	176845993	176849428	176847710	ENSG00000227098.1	-	lincRNA	KNOWN	AC073636.1	2	3	-0.398334
chr2	176929985	176930090	176930037	ENSG00000206866.1	-	snRNA	KNOWN	RNU6-187P	1	1	-0.436897
chr2	176990508	177164516	177077512	ENSG00000236501.5	-	lincRNA	KNOWN	AC079305.11	2	6	-0.494046
chr2	177138699	177138797	177138748	ENSG00000251746.1	+	rRNA	KNOWN	RNA5SP112	1	1	-0.708699
chr2	177155622	177212662	177184142	ENSG00000229337.1	-	antisense	KNOWN	AC079305.8	1	2	-0.099501
chr2	177177695	177178255	177177975	ENSG00000226273.2	+	processed_pseudogene	KNOWN	AC079305.5	1	1	0.001321
chr2	177194983	177195095	177195039	ENSG00000201102.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.103264
chr2	177197985	177198547	177198266	ENSG00000213069.3	+	processed_pseudogene	KNOWN	KRT8P40	1	1	-0.103264
chr2	177212563	177223958	177218260	ENSG00000170144.18	+	protein_coding	KNOWN	HNRNPA3	5	11	0.041719
chr2	177212726	177212799	177212762	ENSG00000263721.1	+	miRNA	KNOWN	MIR4444-1	1	1	0.041719
chr2	177227595	177392697	177310146	ENSG00000116044.15	-	protein_coding	KNOWN	NFE2L2	14	8	-0.039097
chr2	177229191	177229506	177229348	ENSG00000225808.1	-	processed_pseudogene	KNOWN	DNAJC19P5	1	1	0.041719
chr2	177255945	177256010	177255977	ENSG00000265396.1	-	miRNA	KNOWN	MIR3128	1	1	-0.020902
chr2	177264359	177265515	177264937	ENSG00000222043.2	+	antisense	KNOWN	AC079305.10	1	2	-0.020902
chr2	177283508	177392691	177338099	ENSG00000213963.6	-	sense_overlapping	KNOWN	AC074286.1	8	9	-0.081479
chr2	177300600	177302006	177301303	ENSG00000271825.1	+	antisense	KNOWN	RP11-337N6.2	1	2	0.003058
chr2	177306373	177310572	177308472	ENSG00000271996.1	+	antisense	KNOWN	RP11-337N6.1	1	2	-0.020700
chr2	177313806	177313882	177313844	ENSG00000278418.1	-	miRNA	KNOWN	MIR6512	1	1	-0.171043
chr2	177317715	177318471	177318093	ENSG00000280374.1	-	sense_intronic	KNOWN	RP11-337N6.3	1	1	-0.171043
chr2	177344443	177344836	177344639	ENSG00000237178.2	+	processed_pseudogene	KNOWN	AC019080.1	1	1	-0.067207
chr2	177345858	177345961	177345909	ENSG00000238295.1	-	snoRNA	NOVEL	snoU13	1	1	-0.067207
chr2	177392644	177543836	177468240	ENSG00000018510.12	+	protein_coding	KNOWN	AGPS	3	20	-0.224288
chr2	177548998	177553014	177551006	ENSG00000196659.9	-	protein_coding	KNOWN	TTC30B	1	1	-0.304321
chr2	177603089	177618572	177610830	ENSG00000237655.1	+	antisense	KNOWN	AC073834.3	1	3	-0.101973
chr2	177612992	177618966	177615979	ENSG00000197557.6	-	protein_coding	KNOWN	TTC30A	1	1	-0.116250
chr2	177623252	178108339	177865795	ENSG00000128655.16	-	protein_coding	KNOWN	PDE11A	12	21	-0.257234
chr2	177698429	177723289	177710859	ENSG00000229941.5	+	antisense	KNOWN	AC012499.1	2	4	-0.179611
chr2	177953111	178011989	177982550	ENSG00000236664.1	-	sense_intronic	KNOWN	AC011998.1	1	2	-0.449393
chr2	177997273	177998770	177998021	ENSG00000213962.2	-	processed_pseudogene	KNOWN	API5P2	1	1	-0.396199
chr2	178017993	178018465	178018229	ENSG00000229744.1	+	processed_pseudogene	KNOWN	AC011998.2	1	1	-0.234112
chr2	178038902	178039004	178038953	ENSG00000206788.1	+	snRNA	KNOWN	RNU6-629P	1	1	-0.318096
chr2	178092503	178104470	178098486	ENSG00000249909.1	-	unitary_pseudogene	KNOWN	CYCTP	1	3	-0.056331
chr2	178105637	178105753	178105695	ENSG00000227241.1	+	processed_pseudogene	KNOWN	AC011998.4	1	1	-0.056331
chr2	178112424	178139011	178125717	ENSG00000155636.14	+	protein_coding	KNOWN	RBM45	7	10	-0.343566
chr2	178142548	178142651	178142599	ENSG00000223096.1	+	snRNA	KNOWN	RNU5E-9P	1	1	-0.706374
chr2	178194481	178402891	178298686	ENSG00000079156.16	+	protein_coding	KNOWN	OSBPL6	9	26	-0.197869
chr2	178413939	178440243	178427091	ENSG00000223960.6	+	antisense	KNOWN	AC009948.5	7	5	-0.358437
chr2	178431414	178451512	178441463	ENSG00000180228.12	-	protein_coding	KNOWN	PRKRA	12	9	-0.331405
chr2	178451436	178461390	178456413	ENSG00000204311.12	+	protein_coding	KNOWN	DFNB59	5	7	-0.120417
chr2	178454716	178455428	178455072	ENSG00000238082.1	+	processed_pseudogene	KNOWN	AC009948.7	1	1	-0.120417
chr2	178463664	178478600	178471132	ENSG00000079150.17	-	protein_coding	KNOWN	FKBP7	8	5	-0.021906
chr2	178480468	178516462	178498465	ENSG00000116095.10	+	protein_coding	KNOWN	PLEKHA3	4	8	-0.277463
chr2	178521183	178779963	178650573	ENSG00000237298.8	+	antisense	KNOWN	TTN-AS1	72	17	-0.525438
chr2	178525989	178830802	178678395	ENSG00000155657.24	-	protein_coding	KNOWN	TTN	17	363	-0.545481
chr2	178541125	178541799	178541462	ENSG00000270956.1	+	antisense	KNOWN	RP11-65L3.4	1	1	-0.229936
chr2	178548884	178550681	178549782	ENSG00000270277.1	+	antisense	KNOWN	RP11-65L3.2	1	1	-0.277307
chr2	178554561	178558966	178556763	ENSG00000279598.1	+	TEC	KNOWN	RP11-65L3.3	1	1	-0.354755
chr2	178577103	178577622	178577362	ENSG00000271011.1	+	antisense	KNOWN	RP11-171I2.5	1	1	-0.318096
chr2	178578790	178580906	178579848	ENSG00000270574.1	+	antisense	KNOWN	RP11-171I2.2	1	1	-0.318096
chr2	178616581	178617123	178616852	ENSG00000271141.1	+	lincRNA	KNOWN	RP11-171I2.4	1	1	-0.378150
chr2	178644717	178645179	178644948	ENSG00000271401.1	+	lincRNA	KNOWN	RP11-171I2.3	1	1	-0.492971
chr2	178723457	178727046	178725251	ENSG00000267784.1	+	antisense	KNOWN	RP11-171I2.1	1	1	-0.949828
chr2	178829757	179050086	178939921	ENSG00000163492.13	-	protein_coding	KNOWN	CCDC141	8	24	-0.407532
chr2	178831371	178831449	178831410	ENSG00000238542.1	-	snRNA	KNOWN	RNU7-104P	1	1	-0.573589
chr2	179001756	179002760	179002258	ENSG00000231541.1	+	processed_pseudogene	KNOWN	RPS6P2	1	2	-0.297420
chr2	179023257	179023378	179023317	ENSG00000252000.1	-	snoRNA	NOVEL	ACA59	1	1	-0.584394
chr2	179101692	179264790	179183241	ENSG00000187231.13	-	protein_coding	KNOWN	SESTD1	9	18	-0.504722
chr2	179273831	179285707	179279769	ENSG00000237477.1	+	lincRNA	KNOWN	AC093911.1	1	2	-0.096865
chr2	179399728	179400875	179400301	ENSG00000237964.3	-	processed_pseudogene	KNOWN	AC068042.1	1	1	-0.456751
chr2	179441982	179861505	179651743	ENSG00000144331.18	-	protein_coding	KNOWN	ZNF385B	13	13	-0.364833
chr2	179814251	179814675	179814463	ENSG00000213126.2	+	processed_pseudogene	KNOWN	AC092642.1	1	1	-0.329305
chr2	179860836	179860908	179860872	ENSG00000221240.1	-	miRNA	KNOWN	MIR1258	1	1	-0.127321
chr2	179934401	179934538	179934469	ENSG00000280636.1	-	snoRNA	NOVEL	SNORA43	1	1	-0.567779
chr2	179934402	179934527	179934464	ENSG00000202216.2	-	snoRNA	NOVEL	SNORA17	1	1	-0.567779
chr2	179944876	180007113	179975994	ENSG00000163510.13	-	protein_coding	KNOWN	CWC22	2	20	-0.673518
chr2	179993129	179993201	179993165	ENSG00000281155.1	+	miRNA	NOVEL	AC096587.1	1	1	-0.678003
chr2	180473137	180473419	180473278	ENSG00000270289.1	-	processed_pseudogene	KNOWN	RP11-512G4.1	1	1	-0.671774
chr2	180571712	180692454	180632083	ENSG00000225258.1	-	lincRNA	KNOWN	AC009478.1	1	4	-0.285798
chr2	180617118	180617206	180617162	ENSG00000264976.1	-	miRNA	NOVEL	AC009478.2	1	1	-0.763192
chr2	180692104	180916939	180804521	ENSG00000281131.1	+	lincRNA	KNOWN	SCHLAP1	1	5	-0.419687
chr2	180801227	180801533	180801380	ENSG00000279559.1	+	TEC	KNOWN	RP11-739A13.1	1	1	-0.722142
chr2	180872867	180873414	180873140	ENSG00000226564.1	-	processed_pseudogene	KNOWN	FTH1P20	1	1	-0.217336
chr2	180938830	180939298	180939064	ENSG00000236667.1	-	processed_pseudogene	KNOWN	AC104076.2	1	1	-0.757868
chr2	180967248	181076585	181021916	ENSG00000170035.15	+	protein_coding	KNOWN	UBE2E3	14	7	-0.392276
chr2	180979427	180980090	180979758	ENSG00000236153.1	-	antisense	KNOWN	AC104076.3	1	2	-0.589647
chr2	181076051	181105968	181091009	ENSG00000238171.1	-	lincRNA	KNOWN	AC068196.1	1	6	-0.114360
chr2	181101932	181399559	181250745	ENSG00000234663.5	+	lincRNA	KNOWN	AC104820.2	5	6	-0.459042
chr2	181305593	181305652	181305622	ENSG00000266705.1	-	miRNA	KNOWN	MIR4437	1	1	-0.056107
chr2	181422154	181425749	181423951	ENSG00000226681.1	-	lincRNA	KNOWN	AC020595.1	1	2	-0.325796
chr2	181457202	181536187	181496694	ENSG00000115232.13	+	protein_coding	KNOWN	ITGA4	11	28	-0.348700
chr2	181536676	181680665	181608670	ENSG00000188452.13	-	protein_coding	KNOWN	CERKL	14	14	-0.478944
chr2	181673088	181680876	181676982	ENSG00000162992.3	-	protein_coding	KNOWN	NEUROD1	2	2	-0.347540
chr2	181683113	181685707	181684410	ENSG00000234595.1	+	antisense	KNOWN	AC013733.3	1	2	-0.347540
chr2	181690380	181693415	181691897	ENSG00000225570.1	-	lincRNA	KNOWN	AC013733.4	1	2	-0.052398
chr2	181694442	181694900	181694671	ENSG00000223873.1	+	processed_pseudogene	KNOWN	SAP18P2	1	1	-0.052398
chr2	181738606	181738715	181738660	ENSG00000221023.1	+	snRNA	KNOWN	RNU6ATAC19P	1	1	-0.356213
chr2	181887851	181891663	181889757	ENSG00000260742.1	-	antisense	KNOWN	RP11-366L5.1	1	1	-0.416682
chr2	181891833	181930738	181911285	ENSG00000138434.16	+	protein_coding	KNOWN	SSFA2	15	18	-0.390235
chr2	181954241	182131398	182042819	ENSG00000150722.10	+	protein_coding	KNOWN	PPP1R1C	12	7	-0.319195
chr2	181961212	181962478	181961845	ENSG00000213958.2	-	processed_pseudogene	KNOWN	KRT18P29	1	1	-0.066706
chr2	182048822	182048905	182048863	ENSG00000222418.1	+	rRNA	KNOWN	RNA5SP113	1	1	-0.026190
chr2	182088429	182088616	182088522	ENSG00000265129.1	-	miRNA	NOVEL	AC064837.1	1	1	-0.550852
chr2	182140036	182523192	182331614	ENSG00000115252.18	-	protein_coding	KNOWN	PDE1A	9	15	-0.288143
chr2	182314284	182314544	182314414	ENSG00000242121.3	+	misc_RNA	KNOWN	RN7SL267P	1	1	0.081499
chr2	182314454	182314536	182314495	ENSG00000281257.1	+	miRNA	NOVEL	AC012500.1	1	1	0.081499
chr2	182460808	182460895	182460851	ENSG00000216011.2	+	miRNA	NOVEL	AC010888.1	1	1	-0.672719
chr2	182716041	182794464	182755252	ENSG00000077232.16	+	protein_coding	KNOWN	DNAJC10	10	25	-0.320950
chr2	182788098	182788435	182788266	ENSG00000232430.1	+	processed_pseudogene	KNOWN	RPL31P15	1	1	-0.295031
chr2	182828124	182828221	182828172	ENSG00000212404.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.223695
chr2	182833275	182867162	182850218	ENSG00000162998.4	-	protein_coding	KNOWN	FRZB	1	6	-0.402058
chr2	182873841	182873947	182873894	ENSG00000207178.1	+	snRNA	KNOWN	RNU6-1122P	1	1	-0.390703
chr2	182909115	183038858	182973986	ENSG00000061676.14	-	protein_coding	KNOWN	NCKAP1	8	32	-0.320747
chr2	183022859	183022971	183022915	ENSG00000202141.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.443605
chr2	183064235	183064346	183064290	ENSG00000221498.1	-	snoRNA	NOVEL	SNORA77	1	1	-0.024926
chr2	183071040	183072486	183071763	ENSG00000231203.1	-	processed_pseudogene	KNOWN	KRT8P10	1	1	-0.008702
chr2	183078559	183100005	183089282	ENSG00000162999.12	+	protein_coding	KNOWN	DUSP19	3	4	-0.123305
chr2	183083405	183108519	183095962	ENSG00000224643.5	-	antisense	KNOWN	AC064871.3	2	3	-0.189839
chr2	183117513	183161680	183139596	ENSG00000163002.12	+	protein_coding	KNOWN	NUP35	10	10	-0.364882
chr2	183214319	183215400	183214859	ENSG00000272800.1	+	lincRNA	KNOWN	RP11-438L19.1	1	1	-0.745578
chr2	183260642	183261046	183260844	ENSG00000213120.3	+	processed_pseudogene	KNOWN	LIN28AP1	1	1	-0.122133
chr2	183607442	183608119	183607780	ENSG00000177855.8	-	processed_pseudogene	KNOWN	CACYBPP2	1	1	-0.412481
chr2	183904529	183949112	183926820	ENSG00000234172.1	+	lincRNA	KNOWN	AC093639.1	1	3	-0.811084
chr2	184378975	184379044	184379009	ENSG00000266808.1	+	miRNA	KNOWN	MIR548AE1	1	1	-0.782477
chr2	184598366	184939492	184768929	ENSG00000170396.7	+	protein_coding	KNOWN	ZNF804A	2	4	-0.714234
chr2	184902111	184902562	184902336	ENSG00000237824.2	-	processed_pseudogene	KNOWN	RPL23AP33	1	1	-0.917856
chr2	185547135	185547818	185547476	ENSG00000225406.1	-	processed_pseudogene	KNOWN	AC080125.1	1	1	-0.693504
chr2	185661774	185661906	185661840	ENSG00000212581.1	+	snoRNA	NOVEL	U8	1	1	-0.889393
chr2	185719874	185740479	185730176	ENSG00000226747.6	-	antisense	KNOWN	AC007966.1	3	4	-0.771096
chr2	185738628	185833290	185785959	ENSG00000188738.13	+	protein_coding	KNOWN	FSIP2	7	23	-0.730636
chr2	185783691	185800151	185791921	ENSG00000231646.5	-	antisense	KNOWN	FSIP2-AS1	2	3	-0.652464
chr2	185956587	185957063	185956825	ENSG00000224019.1	-	processed_pseudogene	KNOWN	RPL21P32	1	1	-0.978398
chr2	186032891	186083233	186058062	ENSG00000237877.6	-	lincRNA	KNOWN	LINC01473	3	5	-0.916438
chr2	186162949	186163245	186163097	ENSG00000226410.1	-	processed_pseudogene	KNOWN	AC104058.1	1	1	-0.166541
chr2	186261419	186261919	186261669	ENSG00000232568.2	-	processed_pseudogene	KNOWN	RPL23AP35	1	1	-0.689368
chr2	186354570	186356773	186355671	ENSG00000259915.2	-	lincRNA	KNOWN	RP11-410E4.1	1	1	-0.908008
chr2	186364598	186365128	186364863	ENSG00000227692.1	+	processed_pseudogene	KNOWN	MED28P3	1	1	-0.908008
chr2	186486156	186509363	186497759	ENSG00000065548.17	+	protein_coding	KNOWN	ZC3H15	9	10	-0.342462
chr2	186488624	186489083	186488853	ENSG00000224323.2	-	processed_pseudogene	KNOWN	DPRXP1	1	1	0.029835
chr2	186501707	186502265	186501986	ENSG00000281192.1	-	protein_coding	KNOWN	AC018867.1	1	2	-0.416349
chr2	186590065	186680901	186635483	ENSG00000138448.11	+	protein_coding	KNOWN	ITGAV	8	30	-0.367345
chr2	186641339	186695287	186668313	ENSG00000227227.1	-	antisense	KNOWN	AC017101.10	1	3	-0.477451
chr2	186693971	186765965	186729968	ENSG00000144369.12	+	protein_coding	KNOWN	FAM171B	2	8	-0.451046
chr2	186827835	186849208	186838521	ENSG00000163012.3	-	protein_coding	KNOWN	ZSWIM2	2	9	-0.474212
chr2	187001876	187003377	187002626	ENSG00000226553.1	-	processed_pseudogene	KNOWN	AC018735.1	1	1	-0.293792
chr2	187003220	187554663	187278941	ENSG00000224063.5	+	antisense	KNOWN	AC007319.1	3	7	-0.615598
chr2	187122562	187122861	187122711	ENSG00000222845.1	-	misc_RNA	KNOWN	RN7SKP42	1	1	-0.736896
chr2	187270698	187270804	187270751	ENSG00000199626.1	-	snRNA	KNOWN	RNU6-989P	1	1	-0.830006
chr2	187343129	187448460	187395794	ENSG00000064989.12	-	protein_coding	KNOWN	CALCRL	9	16	-0.759611
chr2	187415552	187415818	187415685	ENSG00000231739.2	+	processed_pseudogene	KNOWN	GAPDHP59	1	1	-0.582238
chr2	187464230	187565760	187514995	ENSG00000003436.14	-	protein_coding	KNOWN	TFPI	13	8	-0.407319
chr2	187712816	188384313	188048564	ENSG00000231689.2	-	lincRNA	KNOWN	LINC01090	3	5	-0.252685
chr2	187742587	187742674	187742630	ENSG00000252004.2	-	miRNA	NOVEL	AC068718.1	1	1	-0.147959
chr2	187825341	187826449	187825895	ENSG00000235616.1	+	processed_pseudogene	KNOWN	ST13P2	1	1	-0.674336
chr2	188227189	188228382	188227785	ENSG00000213115.2	+	processed_pseudogene	KNOWN	AC104131.1	1	1	-0.561142
chr2	188276732	188276844	188276788	ENSG00000200650.1	-	rRNA	KNOWN	RNA5SP114	1	1	-0.380077
chr2	188291669	188595931	188443800	ENSG00000144366.15	+	protein_coding	KNOWN	GULP1	18	13	-0.230201
chr2	188297492	188297588	188297540	ENSG00000207951.1	+	miRNA	KNOWN	MIR561	1	1	0.016540
chr2	188598791	188839445	188719118	ENSG00000223523.1	-	sense_overlapping	KNOWN	AC079613.1	1	8	-0.153564
chr2	188734155	188790104	188762129	ENSG00000174325.4	-	protein_coding	KNOWN	DIRC1	1	2	-0.188200
chr2	188974320	189012746	188993533	ENSG00000168542.12	+	protein_coding	KNOWN	COL3A1	6	51	0.124653
chr2	188974419	188974555	188974487	ENSG00000281204.1	+	miRNA	NOVEL	AC066694.1	1	1	0.027452
chr2	188978092	188978161	188978126	ENSG00000221502.1	+	miRNA	KNOWN	MIR1245A	1	1	0.027452
chr2	189031896	189179879	189105887	ENSG00000204262.11	-	protein_coding	KNOWN	COL5A2	3	54	-0.007362
chr2	189095063	189096158	189095610	ENSG00000228073.1	+	antisense	KNOWN	AC133106.2	1	2	-0.232072
chr2	189133036	189133111	189133073	ENSG00000264725.1	-	miRNA	KNOWN	MIR3129	1	1	0.034276
chr2	189280928	189281017	189280972	ENSG00000277207.1	-	miRNA	NOVEL	AC118063.2	1	1	-0.156507
chr2	189311263	189311967	189311615	ENSG00000213601.3	-	processed_pseudogene	KNOWN	KRT18P19	1	1	-0.008120
chr2	189311671	189311761	189311716	ENSG00000266817.1	-	miRNA	NOVEL	AC118063.1	1	1	-0.008120
chr2	189441433	189475565	189458499	ENSG00000115368.9	+	protein_coding	KNOWN	WDR75	7	22	-0.103643
chr2	189486480	189487992	189487236	ENSG00000233996.1	-	processed_pseudogene	KNOWN	AC013439.4	1	2	-0.110995
chr2	189560579	189583758	189572168	ENSG00000138449.10	-	protein_coding	KNOWN	SLC40A1	7	8	-0.470217
chr2	189625443	189626259	189625851	ENSG00000276828.1	-	unprocessed_pseudogene	KNOWN	RP11-88L20.1	1	2	-0.293130
chr2	189661385	189670831	189666108	ENSG00000138381.9	+	protein_coding	KNOWN	ASNSD1	9	6	-0.355281
chr2	189674290	189761193	189717741	ENSG00000151687.14	+	protein_coding	KNOWN	ANKAR	9	23	-0.142644
chr2	189746660	189763227	189754943	ENSG00000128694.11	-	protein_coding	KNOWN	OSGEPL1	8	9	-0.041714
chr2	189753464	189753559	189753511	ENSG00000223249.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.037888
chr2	189762704	189765556	189764130	ENSG00000253559.1	+	antisense	KNOWN	OSGEPL1-AS1	3	3	-0.037888
chr2	189763859	189764456	189764157	ENSG00000273240.1	-	antisense	KNOWN	RP11-455J20.3	1	1	-0.037888
chr2	189770323	189784371	189777347	ENSG00000128699.13	-	protein_coding	KNOWN	ORMDL1	7	5	-0.339724
chr2	189784085	189877629	189830857	ENSG00000064933.16	+	protein_coding	KNOWN	PMS1	21	13	-0.208891
chr2	189879609	190203484	190041546	ENSG00000187699.10	+	protein_coding	KNOWN	C2orf88	9	5	-0.323720
chr2	189917254	189917758	189917506	ENSG00000223824.1	-	processed_pseudogene	KNOWN	AC019178.3	1	1	-0.513291
chr2	189923336	189924216	189923776	ENSG00000204253.4	+	processed_pseudogene	KNOWN	HNRNPCP2	1	1	-0.513291
chr2	189930277	189931010	189930643	ENSG00000213110.2	-	processed_pseudogene	KNOWN	AC019178.2	1	2	-0.121002
chr2	190055697	190062729	190059213	ENSG00000138379.4	-	protein_coding	KNOWN	MSTN	1	3	-0.685616
chr2	190189735	190344193	190266964	ENSG00000198130.14	-	protein_coding	KNOWN	HIBCH	15	16	-0.093292
chr2	190343470	190371665	190357567	ENSG00000151689.12	+	protein_coding	KNOWN	INPP1	15	7	-0.151595
chr2	190408355	190509205	190458780	ENSG00000151690.14	+	protein_coding	KNOWN	MFSD6	10	8	-0.122428
chr2	190454092	190454521	190454306	ENSG00000272979.1	-	antisense	KNOWN	RP11-647K16.1	1	1	-0.014923
chr2	190504342	190534722	190519532	ENSG00000189362.11	-	protein_coding	KNOWN	NEMP2	6	9	-0.181759
chr2	190534855	190568102	190551478	ENSG00000233654.1	+	antisense	KNOWN	AC093388.3	1	3	-0.227519
chr2	190553264	190553480	190553372	ENSG00000251935.1	-	misc_RNA	KNOWN	RN7SKP179	1	1	-0.323046
chr2	190646746	190692766	190669756	ENSG00000138386.16	+	protein_coding	KNOWN	NAB1	10	10	-0.148586
chr2	190676944	190708716	190692830	ENSG00000228509.5	-	antisense	KNOWN	AC006460.2	3	3	-0.312566
chr2	190880797	190882059	190881428	ENSG00000235852.1	-	antisense	KNOWN	AC005540.3	1	2	0.136615
chr2	190880827	190965552	190923189	ENSG00000115419.12	+	protein_coding	KNOWN	GLS	15	18	0.009402
chr2	190880854	190880942	190880898	ENSG00000280517.1	+	miRNA	NOVEL	AC005540.1	1	1	0.136615
chr2	190964358	191020960	190992659	ENSG00000115415.18	-	protein_coding	KNOWN	STAT1	12	25	0.101787
chr2	190992639	190993567	190993103	ENSG00000229023.1	-	processed_pseudogene	KNOWN	AC067945.3	1	2	0.359096
chr2	191017954	191019079	191018516	ENSG00000230686.1	+	antisense	KNOWN	AC067945.2	1	2	-0.192985
chr2	191021526	191032314	191026920	ENSG00000231858.5	+	processed_transcript	KNOWN	AC067945.4	2	3	-0.101990
chr2	191029576	191151596	191090586	ENSG00000138378.17	-	protein_coding	KNOWN	STAT4	10	24	-0.264632
chr2	191121950	191122056	191122003	ENSG00000207402.1	+	snRNA	KNOWN	RNU6-959P	1	1	-0.348581
chr2	191154118	191156070	191155094	ENSG00000280083.1	-	TEC	KNOWN	RP11-317J9.1	1	1	-0.241746
chr2	191174233	191174835	191174534	ENSG00000230611.1	+	processed_pseudogene	KNOWN	HMGB1P27	1	1	0.070827
chr2	191229165	191246172	191237668	ENSG00000227542.1	-	lincRNA	KNOWN	AC092614.2	1	4	0.036514
chr2	191245185	191425389	191335287	ENSG00000128641.18	+	protein_coding	KNOWN	MYO1B	15	31	0.091787
chr2	191288794	191288878	191288836	ENSG00000278321.1	-	miRNA	NOVEL	AC092614.1	1	1	-0.013125
chr2	191370938	191371044	191370991	ENSG00000252130.1	+	snRNA	KNOWN	RNU6-1045P	1	1	0.083677
chr2	191450983	191451092	191451037	ENSG00000275235.1	-	miRNA	NOVEL	AC068056.1	1	1	0.052892
chr2	191678068	191696659	191687363	ENSG00000173559.12	+	protein_coding	KNOWN	NABP1	10	7	-0.004761
chr2	191682452	191682633	191682542	ENSG00000274845.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.130401
chr2	191699476	191699631	191699553	ENSG00000281467.1	-	sRNA	NOVEL	Clostridiales-1	1	1	0.220316
chr2	191793425	191820250	191806837	ENSG00000225884.2	+	antisense	KNOWN	AC098872.3	1	4	-0.396715
chr2	191834302	191847255	191840778	ENSG00000168497.4	-	protein_coding	KNOWN	SDPR	1	2	-0.100653
chr2	191846539	192044525	191945532	ENSG00000233766.7	+	antisense	KNOWN	AC098617.1	18	5	-0.237750
chr2	191881182	191882205	191881693	ENSG00000213946.3	-	processed_pseudogene	KNOWN	DNAJB1P1	1	1	-0.272772
chr2	191949043	192195709	192072376	ENSG00000144339.11	-	protein_coding	KNOWN	TMEFF2	4	10	-0.391139
chr2	192629919	192645706	192637812	ENSG00000229395.1	+	lincRNA	KNOWN	AC013401.1	1	2	-0.606753
chr2	192644102	192645387	192644744	ENSG00000232227.5	-	lincRNA	KNOWN	AC013401.2	2	2	-0.608448
chr2	192749845	192776899	192763372	ENSG00000227418.6	+	lincRNA	KNOWN	PCGEM1	2	4	-0.639680
chr2	192774082	192774416	192774249	ENSG00000226242.1	+	processed_pseudogene	KNOWN	RPS17P8	1	1	-0.677578
chr2	192775943	192776073	192776008	ENSG00000278406.1	+	misc_RNA	NOVEL	PCGEM1	1	1	-0.677578
chr2	193256483	193257757	193257120	ENSG00000232658.1	+	processed_pseudogene	KNOWN	AC092638.1	1	1	-0.413536
chr2	193276668	193277614	193277141	ENSG00000235218.2	-	processed_pseudogene	KNOWN	AC092638.2	1	1	-0.547261
chr2	193730555	193730689	193730622	ENSG00000224219.1	-	processed_pseudogene	KNOWN	AC074290.1	1	1	-0.635929
chr2	193898367	193899394	193898880	ENSG00000260142.1	+	lincRNA	KNOWN	RP11-764E7.1	1	1	-0.644974
chr2	194027919	194028164	194028041	ENSG00000224670.1	+	processed_pseudogene	KNOWN	AC068135.1	1	1	-0.689663
chr2	194129354	194130266	194129810	ENSG00000215043.2	-	processed_pseudogene	KNOWN	GLULP6	1	1	-0.573629
chr2	194187379	194188309	194187844	ENSG00000236695.1	+	processed_pseudogene	KNOWN	HNRNPA1P47	1	1	-0.416620
chr2	194344269	194419645	194381957	ENSG00000225539.5	+	lincRNA	KNOWN	AC018799.1	3	6	-0.650239
chr2	194454581	194455142	194454861	ENSG00000225394.1	-	processed_pseudogene	KNOWN	AC106883.1	1	1	-0.976721
chr2	194558174	194558274	194558224	ENSG00000264560.1	-	miRNA	NOVEL	AC073973.1	1	1	-1.092433
chr2	194658376	194658675	194658525	ENSG00000276123.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.389541
chr2	194664107	194664174	194664140	ENSG00000252517.1	-	snoRNA	NOVEL	SNORD59	1	1	-0.389541
chr2	194730595	194761435	194746015	ENSG00000230173.1	+	lincRNA	KNOWN	AC006196.1	1	4	-0.578261
chr2	195003711	195026370	195015040	ENSG00000235056.1	-	lincRNA	KNOWN	AC010983.1	1	2	-0.853940
chr2	195448532	195478925	195463728	ENSG00000224099.1	+	lincRNA	KNOWN	AC064834.1	1	4	-0.270245
chr2	195451778	195515699	195483738	ENSG00000271893.1	-	lincRNA	KNOWN	RP11-762E8.1	1	3	-0.263554
chr2	195514036	195514142	195514089	ENSG00000202206.1	+	snRNA	KNOWN	RNU6-169P	1	1	0.116239
chr2	195533035	195538681	195535858	ENSG00000223466.1	+	lincRNA	KNOWN	AC064834.2	1	2	-0.278723
chr2	195569628	195572970	195571299	ENSG00000234919.1	-	lincRNA	KNOWN	AC064834.3	1	2	0.074853
chr2	195575977	195737702	195656839	ENSG00000196950.13	+	protein_coding	KNOWN	SLC39A10	9	11	-0.097344
chr2	195582794	195584031	195583412	ENSG00000213107.2	-	processed_pseudogene	KNOWN	AHCYP5	1	1	0.101642
chr2	195670372	195670474	195670423	ENSG00000201813.1	-	snRNA	KNOWN	RNU6-915P	1	1	-0.086811
chr2	195737703	196068812	195903257	ENSG00000118997.13	-	protein_coding	KNOWN	DNAH7	8	65	-0.399682
chr2	195994259	195995680	195994969	ENSG00000203435.2	-	processed_pseudogene	KNOWN	E2F3P2	1	1	-0.199471
chr2	196063312	196063963	196063637	ENSG00000227878.2	-	processed_pseudogene	KNOWN	AC114760.1	1	1	-0.181385
chr2	196133566	196176503	196155034	ENSG00000081320.10	-	protein_coding	KNOWN	STK17B	5	8	-0.207414
chr2	196151263	196154881	196153072	ENSG00000272211.1	+	antisense	KNOWN	RP11-347P5.1	1	2	-0.443218
chr2	196194370	196593692	196394031	ENSG00000138411.10	-	protein_coding	KNOWN	HECW2	6	29	-0.174257
chr2	196260024	196264204	196262114	ENSG00000229056.2	+	antisense	KNOWN	AC020571.3	3	3	0.183490
chr2	196289409	196289707	196289558	ENSG00000276200.1	+	misc_RNA	KNOWN	RN7SL820P	1	1	0.057016
chr2	196638422	196639497	196638959	ENSG00000282836.1	-	antisense	KNOWN	RP11-369J9.1	1	2	-0.208241
chr2	196639554	196763490	196701522	ENSG00000144395.17	+	protein_coding	KNOWN	CCDC150	19	28	-0.225981
chr2	196686148	196686330	196686239	ENSG00000252923.1	-	scaRNA	NOVEL	SCARNA16	1	1	-0.381462
chr2	196763032	196799725	196781378	ENSG00000119041.10	-	protein_coding	KNOWN	GTF3C3	11	18	-0.164263
chr2	196805002	196810276	196807639	ENSG00000187944.2	-	protein_coding	KNOWN	C2orf66	1	3	-0.059800
chr2	196831975	196832190	196832082	ENSG00000280176.1	-	TEC	KNOWN	RP11-84A12.1	1	1	-0.601030
chr2	196833004	196927796	196880400	ENSG00000197121.14	-	protein_coding	KNOWN	PGAP1	11	28	-0.262094
chr2	196967017	197311173	197139095	ENSG00000065413.16	-	protein_coding	KNOWN	ANKRD44	14	28	-0.189611
chr2	197014990	197016015	197015502	ENSG00000225636.1	+	processed_pseudogene	KNOWN	HNRNPA3P15	1	1	-0.171043
chr2	197028711	197030143	197029427	ENSG00000224442.1	-	processed_pseudogene	KNOWN	AC017035.2	1	2	-0.187548
chr2	197197991	197199273	197198632	ENSG00000231621.1	+	antisense	KNOWN	AC013264.2	1	2	-0.235303
chr2	197250858	197302519	197276688	ENSG00000236977.1	-	sense_intronic	KNOWN	ANKRD44-IT1	1	6	-0.089389
chr2	197263111	197263535	197263323	ENSG00000230482.1	+	processed_pseudogene	KNOWN	ATP5G2P3	1	1	-0.043986
chr2	197311393	197312740	197312066	ENSG00000225979.1	+	antisense	KNOWN	AC010746.3	1	2	-0.140669
chr2	197379701	197380892	197380296	ENSG00000213104.3	-	processed_pseudogene	KNOWN	NPM1P46	1	2	-0.205394
chr2	197389784	197435091	197412437	ENSG00000115524.15	-	protein_coding	KNOWN	SF3B1	12	25	0.067279
chr2	197404718	197404854	197404786	ENSG00000202434.1	+	snoRNA	NOVEL	SNORA4	1	1	0.082277
chr2	197447745	197447851	197447798	ENSG00000206836.1	+	snRNA	KNOWN	RNU6-1029P	1	1	0.299587
chr2	197453423	197475308	197464365	ENSG00000115520.8	+	protein_coding	KNOWN	COQ10B	4	5	-0.021609
chr2	197486581	197516737	197501659	ENSG00000144381.16	-	protein_coding	KNOWN	HSPD1	14	12	0.293550
chr2	197499994	197503457	197501725	ENSG00000115541.10	+	protein_coding	KNOWN	HSPE1	7	4	0.248111
chr2	197500413	197550726	197525569	ENSG00000270757.1	+	protein_coding	KNOWN	HSPE1-MOB4	1	9	0.208914
chr2	197515571	197553699	197534635	ENSG00000115540.14	+	protein_coding	KNOWN	MOB4	8	8	0.115137
chr2	197533803	197533965	197533884	ENSG00000231699.1	+	processed_pseudogene	KNOWN	AC020550.7	1	1	-0.169395
chr2	197568224	197676045	197622134	ENSG00000162944.10	-	protein_coding	KNOWN	RFTN2	4	9	-0.377196
chr2	197693106	197774823	197733964	ENSG00000222017.1	+	antisense	KNOWN	AC011997.1	1	4	-0.285071
chr2	197705369	197708387	197706878	ENSG00000247626.4	+	protein_coding	KNOWN	MARS2	1	1	-0.239214
chr2	197726879	197786762	197756820	ENSG00000152430.17	-	protein_coding	KNOWN	BOLL	8	12	-0.457628
chr2	197804702	198572581	198188641	ENSG00000115896.15	+	protein_coding	KNOWN	PLCL1	6	7	-0.527028
chr2	198187802	198191521	198189661	ENSG00000237035.1	-	lincRNA	KNOWN	AC109589.1	2	2	-0.297966
chr2	198299363	198375097	198337230	ENSG00000236653.1	-	lincRNA	KNOWN	AC005235.1	3	2	-0.502439
chr2	198553195	198772356	198662775	ENSG00000225421.1	-	lincRNA	KNOWN	AC019330.1	1	3	-0.634374
chr2	198566645	198566729	198566687	ENSG00000252511.1	-	miRNA	NOVEL	AC019330.2	1	1	-0.609485
chr2	198701022	198701166	198701094	ENSG00000280599.1	+	miRNA	NOVEL	AC068121.1	1	1	-0.695014
chr2	198882573	199071791	198977182	ENSG00000231557.1	-	lincRNA	KNOWN	AC018717.1	1	3	-0.578560
chr2	199108584	199110088	199109336	ENSG00000230407.1	+	processed_pseudogene	KNOWN	AC018717.2	1	1	-0.696679
chr2	199191059	199191120	199191089	ENSG00000238698.1	+	snRNA	KNOWN	RNU7-147P	1	1	-0.209472
chr2	199269500	199471266	199370383	ENSG00000119042.16	-	protein_coding	KNOWN	SATB2	11	12	-0.270044
chr2	199325310	199329362	199327336	ENSG00000257045.1	+	antisense	KNOWN	RP11-486F17.1	1	3	-0.134973
chr2	199457700	199476935	199467317	ENSG00000225953.2	+	antisense	KNOWN	SATB2-AS1	5	4	-0.139194
chr2	199608068	199659132	199633600	ENSG00000238217.5	+	lincRNA	KNOWN	AC093590.1	4	6	-0.659941
chr2	199659551	199660729	199660140	ENSG00000213938.3	+	processed_pseudogene	KNOWN	SEPHS1P6	1	1	-0.721595
chr2	199760544	199851173	199805858	ENSG00000226124.6	-	protein_coding	KNOWN	FTCDNL1	4	5	-0.424611
chr2	199867396	199911159	199889277	ENSG00000232732.9	-	processed_transcript	KNOWN	AC073043.1	51	5	-0.472277
chr2	199872172	199872378	199872275	ENSG00000227004.2	+	processed_pseudogene	KNOWN	AC108032.1	1	1	-0.736242
chr2	199901081	199901377	199901229	ENSG00000240302.3	-	misc_RNA	KNOWN	RN7SL717P	1	1	-0.191402
chr2	199911256	199955935	199933595	ENSG00000178074.5	+	protein_coding	KNOWN	C2orf69	2	2	-0.301997
chr2	199929975	199955736	199942855	ENSG00000162971.10	-	protein_coding	KNOWN	TYW5	5	8	-0.249714
chr2	199955317	200008540	199981928	ENSG00000162972.10	+	protein_coding	KNOWN	C2orf47	4	6	-0.234151
chr2	200305881	200482263	200394072	ENSG00000196141.12	+	protein_coding	KNOWN	SPATS2L	28	14	0.028278
chr2	200373175	200373269	200373222	ENSG00000201649.1	+	misc_RNA	KNOWN	RNY4P34	1	1	0.187340
chr2	200460651	200460976	200460813	ENSG00000280896.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.116761
chr2	200488952	200519784	200504368	ENSG00000155729.12	-	protein_coding	KNOWN	KCTD18	5	7	0.107741
chr2	200510008	200583782	200546895	ENSG00000163535.17	+	protein_coding	KNOWN	SGOL2	6	9	-0.031841
chr2	200585868	200677064	200631466	ENSG00000138356.13	+	protein_coding	KNOWN	AOX1	8	35	0.001588
chr2	200675855	200675945	200675900	ENSG00000276477.1	-	miRNA	NOVEL	AC007163.1	1	1	0.099686
chr2	200678233	200738781	200708507	ENSG00000244301.5	+	unitary_pseudogene	KNOWN	AOX3P	5	19	0.028415
chr2	200682822	200683196	200683009	ENSG00000280298.1	+	protein_coding	KNOWN	AC007163.2	1	1	0.099686
chr2	200695917	200794239	200745078	ENSG00000243478.7	+	unitary_pseudogene	KNOWN	AOX2P	5	25	0.091738
chr2	200712305	200735177	200723741	ENSG00000237166.1	-	lincRNA	KNOWN	AC007163.3	1	3	0.120348
chr2	200775584	200775750	200775667	ENSG00000201737.1	+	snRNA	KNOWN	RNU1-133P	1	1	0.169994
chr2	200780495	200812170	200796332	ENSG00000230408.3	-	antisense	KNOWN	AC007163.6	1	4	0.138953
chr2	200810594	200827338	200818966	ENSG00000082153.17	+	protein_coding	KNOWN	BZW1	13	12	0.046668
chr2	200830009	200830116	200830062	ENSG00000207116.1	+	snRNA	KNOWN	RNU6-31P	1	1	0.075690
chr2	200843186	200843299	200843242	ENSG00000221530.1	-	miRNA	NOVEL	AC005037.1	1	1	0.075690
chr2	200844240	200845461	200844850	ENSG00000224346.1	+	processed_pseudogene	KNOWN	BICD1P1	1	1	0.075690
chr2	200849038	200849144	200849091	ENSG00000223092.1	-	rRNA	KNOWN	RNA5SP115	1	1	0.075690
chr2	200853009	200864744	200858876	ENSG00000013441.15	-	protein_coding	KNOWN	CLK1	15	13	0.410521
chr2	200863152	200863247	200863199	ENSG00000252759.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.410521
chr2	200870907	200889303	200880105	ENSG00000240344.8	-	protein_coding	KNOWN	PPIL3	15	8	-0.023485
chr2	200881715	200881821	200881768	ENSG00000201499.1	-	snRNA	KNOWN	RNU6-312P	1	1	-0.023485
chr2	200889327	200903930	200896628	ENSG00000196290.14	+	protein_coding	KNOWN	NIF3L1	9	8	0.375089
chr2	200899020	200899121	200899070	ENSG00000252916.1	+	snRNA	KNOWN	RNU6-762P	1	1	0.394315
chr2	200908973	200963680	200936326	ENSG00000115942.8	-	protein_coding	KNOWN	ORC2	7	18	0.229319
chr2	200963263	201009102	200986182	ENSG00000183308.6	+	antisense	KNOWN	AC005037.3	2	2	0.044937
chr2	200973718	201071671	201022694	ENSG00000155744.9	-	protein_coding	KNOWN	FAM126B	11	14	0.019371
chr2	201063089	201064051	201063570	ENSG00000225695.1	+	processed_pseudogene	KNOWN	HNRNPA1P35	1	1	0.332255
chr2	201066691	201067191	201066941	ENSG00000226658.1	+	processed_pseudogene	KNOWN	RPL23AP30	1	1	0.332255
chr2	201071433	201085750	201078591	ENSG00000119013.8	+	protein_coding	KNOWN	NDUFB3	4	4	0.355026
chr2	201079842	201079944	201079893	ENSG00000252148.1	+	snRNA	KNOWN	RNU6-1206P	1	1	0.355026
chr2	201097744	201098091	201097917	ENSG00000273975.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.298443
chr2	201101382	201103136	201102259	ENSG00000232719.1	+	lincRNA	KNOWN	RP11-13J8.1	1	2	0.298443
chr2	201102089	201102957	201102523	ENSG00000224672.4	-	processed_pseudogene	KNOWN	AC007272.3	1	2	0.298443
chr2	201116104	201176687	201146395	ENSG00000003402.19	+	protein_coding	KNOWN	CFLAR	25	10	0.394259
chr2	201137516	201140027	201138771	ENSG00000232133.1	-	processed_pseudogene	KNOWN	IMPDH1P10	1	2	0.569571
chr2	201140278	201157823	201149050	ENSG00000226312.7	-	antisense	KNOWN	CFLAR-AS1	23	8	0.367920
chr2	201141904	201141966	201141935	ENSG00000238829.1	+	snRNA	KNOWN	RNU7-45P	1	1	0.569571
chr2	201162484	201162680	201162582	ENSG00000235579.1	-	processed_pseudogene	KNOWN	AC007283.4	1	1	0.117377
chr2	201166965	201167546	201167255	ENSG00000234431.2	+	3prime_overlapping_ncrna	KNOWN	AC007283.5	1	2	0.117377
chr2	201182881	201229406	201206143	ENSG00000003400.14	+	protein_coding	KNOWN	CASP10	13	10	0.089331
chr2	201212283	201213081	201212682	ENSG00000227348.1	-	unprocessed_pseudogene	KNOWN	MTND5P25	1	1	-0.080845
chr2	201213298	201214660	201213979	ENSG00000225796.2	-	unprocessed_pseudogene	KNOWN	MTND4P23	1	1	-0.080845
chr2	201214653	201214950	201214801	ENSG00000235318.3	-	unprocessed_pseudogene	KNOWN	MTND4LP13	1	1	-0.080845
chr2	201233443	201287711	201260577	ENSG00000064012.21	+	protein_coding	KNOWN	CASP8	20	10	0.333486
chr2	201288271	201357398	201322834	ENSG00000155749.12	-	protein_coding	KNOWN	ALS2CR12	10	15	0.123928
chr2	201377207	201451611	201414409	ENSG00000115993.11	-	protein_coding	KNOWN	TRAK2	6	17	-0.076266
chr2	201387858	201480846	201434352	ENSG00000082146.12	+	protein_coding	KNOWN	STRADB	10	12	-0.045057
chr2	201410544	201413308	201411926	ENSG00000213090.2	-	processed_pseudogene	KNOWN	AC007256.5	1	1	-0.197515
chr2	201423513	201423604	201423558	ENSG00000202008.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.197515
chr2	201487425	201619178	201553301	ENSG00000155754.14	-	protein_coding	KNOWN	ALS2CR11	5	16	0.068822
chr2	201549631	201550307	201549969	ENSG00000234842.1	+	unprocessed_pseudogene	KNOWN	MTCO2P16	1	1	-0.062679
chr2	201550524	201551049	201550786	ENSG00000224299.1	+	unprocessed_pseudogene	KNOWN	MTATP6P16	1	1	-0.214435
chr2	201552859	201553612	201553235	ENSG00000227736.1	+	unprocessed_pseudogene	KNOWN	MTCO3P16	1	1	-0.214435
chr2	201553688	201554031	201553859	ENSG00000224590.1	+	unprocessed_pseudogene	KNOWN	MTND3P16	1	1	-0.214435
chr2	201554096	201554390	201554243	ENSG00000234731.2	+	unprocessed_pseudogene	KNOWN	MTND4LP16	1	1	-0.214435
chr2	201554384	201556051	201555217	ENSG00000249177.1	+	unprocessed_pseudogene	KNOWN	MTND4P29	1	2	-0.214435
chr2	201556892	201558265	201557578	ENSG00000227841.1	+	unprocessed_pseudogene	KNOWN	MTND5P31	1	1	-0.214435
chr2	201620184	201643570	201631877	ENSG00000155755.18	-	protein_coding	KNOWN	TMEM237	13	13	0.127388
chr2	201621646	201623430	201622538	ENSG00000241790.2	-	processed_pseudogene	KNOWN	ENO1P4	1	1	0.187961
chr2	201644870	201698694	201671782	ENSG00000082126.17	-	protein_coding	KNOWN	MPP4	12	22	0.132268
chr2	201646716	201646820	201646768	ENSG00000222972.1	+	snRNA	KNOWN	RNU6-651P	1	1	0.083580
chr2	201700554	201781189	201740871	ENSG00000003393.14	-	protein_coding	KNOWN	ALS2	12	34	0.159892
chr2	201756774	201756898	201756836	ENSG00000281201.1	+	miRNA	NOVEL	AC007279.1	1	1	0.029256
chr2	201762737	201763573	201763155	ENSG00000230799.1	+	processed_pseudogene	KNOWN	AC007279.2	1	1	0.029256
chr2	201790461	201895550	201843005	ENSG00000138395.14	+	protein_coding	KNOWN	CDK15	9	15	0.216358
chr2	201808681	201808782	201808731	ENSG00000202137.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.364723
chr2	201824548	201824832	201824690	ENSG00000231124.1	+	processed_pseudogene	KNOWN	UBE2V1P11	1	1	0.254842
chr2	201841129	201841230	201841179	ENSG00000221374.1	+	miRNA	NOVEL	AC007242.1	1	1	0.143391
chr2	201927439	201927543	201927491	ENSG00000212184.1	+	snRNA	KNOWN	RNU6-440P	1	1	0.295084
chr2	201953257	201953336	201953296	ENSG00000221489.1	-	miRNA	NOVEL	AC007358.1	1	1	0.343864
chr2	202032770	202033537	202033153	ENSG00000273209.1	-	lincRNA	KNOWN	RP11-107N15.1	1	1	0.219999
chr2	202034587	202038445	202036516	ENSG00000155760.2	+	protein_coding	KNOWN	FZD7	1	1	0.219999
chr2	202073255	202197862	202135558	ENSG00000182329.10	+	protein_coding	KNOWN	KIAA2012	5	22	0.261417
chr2	202113626	202117058	202115342	ENSG00000222035.3	-	antisense	KNOWN	AC079354.3	1	2	0.489647
chr2	202115167	202115260	202115213	ENSG00000274633.1	-	miRNA	NOVEL	AC079354.1	1	1	0.489647
chr2	202178660	202179391	202179025	ENSG00000231903.1	-	antisense	KNOWN	AC079354.5	1	2	0.114476
chr2	202179297	202179971	202179634	ENSG00000227890.1	+	processed_pseudogene	KNOWN	PSMA2P3	1	1	0.114476
chr2	202201384	202201886	202201635	ENSG00000223825.5	-	processed_pseudogene	KNOWN	DAZAP2P1	1	1	0.091992
chr2	202206180	202238608	202222394	ENSG00000116030.16	-	protein_coding	KNOWN	SUMO1	10	6	0.020922
chr2	202231696	202231849	202231772	ENSG00000224463.1	+	processed_pseudogene	KNOWN	AC079354.6	1	1	-0.054557
chr2	202265716	202303666	202284691	ENSG00000055044.10	+	protein_coding	KNOWN	NOP58	10	15	0.299465
chr2	202276431	202276518	202276474	ENSG00000212534.1	+	snoRNA	KNOWN	SNORD70	1	1	0.150206
chr2	202278108	202278192	202278150	ENSG00000212309.1	+	snoRNA	NOVEL	SNORD70	1	1	0.150206
chr2	202291332	202291421	202291376	ENSG00000271852.1	+	snoRNA	KNOWN	SNORD11B	1	1	0.504432
chr2	202293051	202293134	202293092	ENSG00000238317.2	+	snoRNA	KNOWN	SNORD11	1	1	0.504432
chr2	202333439	202333728	202333583	ENSG00000264275.1	+	misc_RNA	KNOWN	RN7SL753P	1	1	0.509227
chr2	202333642	202333724	202333683	ENSG00000281619.1	+	miRNA	NOVEL	AC064836.1	1	1	0.509227
chr2	202336024	202336727	202336375	ENSG00000226261.1	-	processed_pseudogene	KNOWN	AC064836.3	1	1	0.509227
chr2	202336739	202337200	202336969	ENSG00000272966.1	+	lincRNA	KNOWN	RP11-686O6.1	1	1	0.509227
chr2	202357076	202357417	202357246	ENSG00000242696.3	-	misc_RNA	KNOWN	RN7SL40P	1	1	0.248334
chr2	202374932	202375604	202375268	ENSG00000273456.1	-	lincRNA	KNOWN	RP11-686O6.2	1	1	0.136939
chr2	202376936	202567751	202472343	ENSG00000204217.12	+	protein_coding	KNOWN	BMPR2	3	13	0.037016
chr2	202505012	202505343	202505177	ENSG00000270915.1	-	processed_pseudogene	KNOWN	RP11-27M5.1	1	1	0.011072
chr2	202520401	202520989	202520695	ENSG00000236047.1	+	processed_pseudogene	KNOWN	AC073410.1	1	1	0.208715
chr2	202614214	202614704	202614459	ENSG00000223619.1	+	unprocessed_pseudogene	KNOWN	MTCO1P17	1	1	0.109270
chr2	202614853	202615529	202615191	ENSG00000233888.2	+	unprocessed_pseudogene	KNOWN	MTCO2P17	1	1	0.109270
chr2	202615769	202616440	202616104	ENSG00000235433.1	+	unprocessed_pseudogene	KNOWN	MTATP6P17	1	1	0.109270
chr2	202616700	202617212	202616956	ENSG00000237542.1	+	unprocessed_pseudogene	KNOWN	MTCO3P17	1	1	0.109270
chr2	202617284	202617627	202617455	ENSG00000233134.1	+	unprocessed_pseudogene	KNOWN	MTND3P17	1	1	0.109270
chr2	202617695	202617987	202617841	ENSG00000241221.2	+	unprocessed_pseudogene	KNOWN	MTND4LP17	1	1	0.109270
chr2	202617983	202618881	202618432	ENSG00000227454.2	+	unprocessed_pseudogene	KNOWN	MTND4P30	1	1	0.109270
chr2	202619185	202619896	202619540	ENSG00000233311.1	-	processed_pseudogene	KNOWN	AC009960.3	1	1	0.109270
chr2	202635188	202769757	202702472	ENSG00000138439.11	+	protein_coding	KNOWN	FAM117B	2	8	-0.264985
chr2	202773150	202871985	202822567	ENSG00000163596.16	-	protein_coding	KNOWN	ICA1L	22	16	-0.285128
chr2	202773720	202774360	202774040	ENSG00000240761.1	-	processed_pseudogene	KNOWN	AC098831.4	2	1	-0.181027
chr2	202840331	202841781	202841056	ENSG00000233579.1	-	processed_pseudogene	KNOWN	KRT8P15	1	1	-0.251310
chr2	202840949	202841082	202841015	ENSG00000281423.1	+	miRNA	NOVEL	AC010900.1	1	1	-0.251310
chr2	202874782	203014798	202944790	ENSG00000138442.9	-	protein_coding	KNOWN	WDR12	8	13	-0.267430
chr2	202912214	202987063	202949638	ENSG00000138380.17	+	protein_coding	KNOWN	CARF	20	17	-0.216609
chr2	202924609	202925904	202925256	ENSG00000232479.2	+	processed_pseudogene	KNOWN	AC010900.2	1	1	-0.020708
chr2	202995194	202995403	202995298	ENSG00000270664.1	+	processed_pseudogene	KNOWN	RP11-544H14.1	1	1	-0.355467
chr2	203014879	203226378	203120628	ENSG00000144426.18	+	protein_coding	KNOWN	NBEAL1	10	55	-0.176182
chr2	203040108	203040899	203040503	ENSG00000232994.1	+	processed_pseudogene	KNOWN	RPL7P14	1	2	0.046477
chr2	203052285	203052418	203052351	ENSG00000202059.1	-	snoRNA	NOVEL	SNORA1	1	1	-0.220221
chr2	203061314	203062403	203061858	ENSG00000228513.1	-	processed_pseudogene	KNOWN	AC023271.1	1	1	-0.220221
chr2	203074685	203075142	203074913	ENSG00000225124.1	-	processed_pseudogene	KNOWN	RPL23AP36	1	1	-0.253144
chr2	203190780	203191277	203191028	ENSG00000204196.5	+	processed_pseudogene	KNOWN	RPL12P16	1	1	-0.388634
chr2	203238449	203305840	203272144	ENSG00000119004.14	+	protein_coding	KNOWN	CYP20A1	11	14	-0.011527
chr2	203259604	203259897	203259750	ENSG00000264041.2	+	misc_RNA	KNOWN	RN7SL670P	1	1	-0.073817
chr2	203315390	203315871	203315630	ENSG00000238285.1	-	processed_pseudogene	KNOWN	MRPL50P2	1	1	-0.101831
chr2	203328219	203447723	203387971	ENSG00000138443.15	+	protein_coding	KNOWN	ABI2	24	11	-0.001316
chr2	203328459	203329226	203328842	ENSG00000256458.1	-	antisense	KNOWN	RP11-363J17.1	1	2	-0.101831
chr2	203394345	203535410	203464877	ENSG00000173166.17	-	protein_coding	KNOWN	RAPH1	13	16	-0.014997
chr2	203634577	203636016	203635296	ENSG00000233459.1	-	processed_pseudogene	KNOWN	AC125238.2	1	1	0.108386
chr2	203672175	203672423	203672299	ENSG00000233031.1	-	processed_pseudogene	KNOWN	AC125238.3	1	1	0.177108
chr2	203706475	203738912	203722693	ENSG00000178562.17	+	protein_coding	KNOWN	CD28	3	4	-0.109941
chr2	203764295	203765593	203764944	ENSG00000224791.1	-	processed_pseudogene	KNOWN	KRT18P39	1	1	-0.119927
chr2	203764707	203764798	203764752	ENSG00000211573.2	-	miRNA	NOVEL	AC125238.1	1	1	-0.119927
chr2	203772631	203773502	203773066	ENSG00000213925.3	-	processed_pseudogene	KNOWN	NPM1P33	1	1	-0.193165
chr2	203782037	203782143	203782090	ENSG00000206970.1	+	snRNA	KNOWN	RNU6-474P	1	1	-0.193165
chr2	203867786	203873960	203870873	ENSG00000163599.14	+	protein_coding	KNOWN	CTLA4	5	4	-0.217334
chr2	203936748	203961577	203949162	ENSG00000163600.12	+	protein_coding	KNOWN	ICOS	2	5	-0.315446
chr2	204065706	204067363	204066534	ENSG00000235951.1	+	processed_pseudogene	KNOWN	AC009965.1	1	2	-0.355467
chr2	204090457	204109849	204100153	ENSG00000234714.1	+	lincRNA	KNOWN	AC009965.2	1	5	-0.685616
chr2	204228137	204234985	204231561	ENSG00000237271.1	-	lincRNA	KNOWN	AC009498.1	1	2	-0.410320
chr2	204306842	204307364	204307103	ENSG00000236681.1	+	processed_pseudogene	KNOWN	DSTNP5	1	1	-0.237510
chr2	204379095	204379792	204379443	ENSG00000225304.1	+	processed_pseudogene	KNOWN	AC106901.1	1	1	-0.228097
chr2	204470076	204473837	204471956	ENSG00000236634.1	-	lincRNA	KNOWN	AC016903.1	1	2	-0.295612
chr2	204475356	204507672	204491514	ENSG00000237843.1	+	lincRNA	KNOWN	AC016903.2	1	2	-0.237937
chr2	204545793	205620162	205082977	ENSG00000116117.17	+	protein_coding	KNOWN	PARD3B	14	23	-0.271501
chr2	205253304	205253503	205253403	ENSG00000223890.1	-	processed_pseudogene	KNOWN	AC008171.1	1	1	-0.066912
chr2	205681990	205798133	205740061	ENSG00000118257.16	+	protein_coding	KNOWN	NRP2	17	17	0.216760
chr2	205756469	205764006	205760237	ENSG00000225216.6	-	antisense	KNOWN	AC007362.3	15	4	0.292586
chr2	205900630	205900958	205900794	ENSG00000201875.1	+	misc_RNA	KNOWN	RN7SKP178	1	1	0.006092
chr2	205949091	205950145	205949618	ENSG00000213739.3	+	processed_pseudogene	KNOWN	AC007679.1	1	2	-0.129406
chr2	205989585	206000858	205995221	ENSG00000225610.1	+	antisense	KNOWN	AC007679.3	1	3	-0.228702
chr2	205993721	206086303	206040012	ENSG00000114933.15	-	protein_coding	KNOWN	INO80D	3	11	-0.132880
chr2	206007880	206007974	206007927	ENSG00000252485.1	-	misc_RNA	NOVEL	Vault	1	1	-0.232072
chr2	206025593	206025697	206025645	ENSG00000207386.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.201999
chr2	206040432	206040845	206040638	ENSG00000237041.1	+	processed_pseudogene	KNOWN	AC007679.4	1	1	-0.049669
chr2	206084605	206086564	206085584	ENSG00000227946.1	+	lincRNA	KNOWN	AC007383.3	2	2	-0.061020
chr2	206114817	206159603	206137210	ENSG00000023228.13	-	protein_coding	KNOWN	NDUFS1	10	19	0.109470
chr2	206115547	206122323	206118935	ENSG00000231955.1	+	antisense	KNOWN	AC007383.4	1	2	0.206812
chr2	206116110	206116500	206116305	ENSG00000237580.1	-	processed_pseudogene	KNOWN	GCSHP3	1	1	0.206812
chr2	206159585	206162928	206161256	ENSG00000114942.13	+	protein_coding	KNOWN	EEF1B2	11	8	0.109167
chr2	206160843	206161024	206160933	ENSG00000277502.1	+	misc_RNA	NOVEL	uc_338	1	1	0.109167
chr2	206161841	206161929	206161885	ENSG00000281780.1	+	snoRNA	NOVEL	snoZ196	1	1	0.109167
chr2	206161878	206161957	206161917	ENSG00000207047.2	+	snoRNA	KNOWN	SNORD51	1	1	0.109167
chr2	206162228	206162359	206162293	ENSG00000207406.1	+	snoRNA	KNOWN	SNORA41	1	1	0.109167
chr2	206175316	206218047	206196681	ENSG00000183671.12	-	protein_coding	KNOWN	GPR1	10	4	0.133183
chr2	206203376	206266243	206234809	ENSG00000279220.1	+	processed_transcript	KNOWN	GPR1-AS	2	6	-0.065536
chr2	206221315	206221634	206221474	ENSG00000222496.1	+	misc_RNA	KNOWN	RN7SKP200	1	1	0.244944
chr2	206236236	206236871	206236553	ENSG00000159186.4	-	processed_pseudogene	KNOWN	AC007383.6	1	1	-0.320556
chr2	206259628	206259918	206259773	ENSG00000224070.1	-	processed_pseudogene	KNOWN	HMGN1P6	1	1	-0.137490
chr2	206260066	206260214	206260140	ENSG00000252716.1	-	misc_RNA	KNOWN	RN7SKP260	1	1	-0.137490
chr2	206274663	206314428	206294545	ENSG00000204186.7	+	protein_coding	KNOWN	ZDBF2	2	5	-0.216405
chr2	206355739	206356119	206355929	ENSG00000279921.1	+	protein_coding	KNOWN	AC017081.1	1	1	-0.455496
chr2	206410087	206410909	206410498	ENSG00000180105.11	-	processed_pseudogene	KNOWN	AC017081.2	1	1	-0.252920
chr2	206419292	206420238	206419765	ENSG00000234491.1	-	processed_pseudogene	KNOWN	HNRNPA1P51	1	1	-0.252920
chr2	206443539	206621130	206532334	ENSG00000114948.12	+	protein_coding	KNOWN	ADAM23	3	26	-0.518394
chr2	206606497	206609812	206608154	ENSG00000228577.1	-	antisense	KNOWN	AC010731.2	1	3	-0.433099
chr2	206640073	206641282	206640677	ENSG00000231653.1	+	antisense	KNOWN	AC010731.3	1	2	-0.492971
chr2	206642418	206649449	206645933	ENSG00000235118.7	+	lincRNA	KNOWN	AC010731.4	3	3	-0.492971
chr2	206651621	206718396	206685008	ENSG00000232125.2	-	protein_coding	KNOWN	DYTN	2	12	-0.554666
chr2	206686517	206687362	206686939	ENSG00000213083.3	-	processed_pseudogene	KNOWN	AC010731.6	1	1	-0.644974
chr2	206701065	206701185	206701125	ENSG00000207319.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.579682
chr2	206737763	206765547	206751655	ENSG00000138400.12	-	protein_coding	KNOWN	MDH1B	6	12	-0.292372
chr2	206765357	206792509	206778933	ENSG00000118246.13	+	protein_coding	KNOWN	FASTKD2	6	12	-0.209772
chr2	206783234	206783308	206783271	ENSG00000263468.1	+	miRNA	KNOWN	MIR3130-1	1	1	-0.160774
chr2	206821190	206822294	206821742	ENSG00000260171.1	-	lincRNA	KNOWN	RP11-95H11.1	1	1	-0.177195
chr2	206866795	206868289	206867542	ENSG00000229321.1	+	lincRNA	KNOWN	AC008269.2	1	2	-0.275984
chr2	206939554	206969474	206954514	ENSG00000144410.4	+	protein_coding	KNOWN	CPO	1	9	-0.581196
chr2	207074137	207167267	207120702	ENSG00000118263.14	-	protein_coding	KNOWN	KLF7	10	5	-0.014151
chr2	207109987	207110073	207110030	ENSG00000253008.2	-	miRNA	KNOWN	MIR2355	1	1	-0.205882
chr2	207120884	207122044	207121464	ENSG00000237892.1	-	sense_intronic	KNOWN	KLF7-IT1	1	2	-0.212014
chr2	207166400	207166498	207166449	ENSG00000277590.1	+	miRNA	KNOWN	MIR7845	1	1	0.267563
chr2	207173634	207222790	207198212	ENSG00000224342.1	+	lincRNA	KNOWN	AC007879.1	1	5	-0.060133
chr2	207186717	207236066	207211391	ENSG00000234902.6	-	lincRNA	KNOWN	AC007879.2	2	4	-0.087353
chr2	207226949	207228308	207227628	ENSG00000225916.1	+	lincRNA	KNOWN	AC007879.4	1	2	-0.288913
chr2	207235299	207237875	207236587	ENSG00000240440.1	-	lincRNA	KNOWN	AC007879.3	1	2	0.091992
chr2	207239650	207245887	207242768	ENSG00000229647.1	+	lincRNA	KNOWN	AC007879.7	2	3	0.091992
chr2	207239864	207529795	207384829	ENSG00000223725.6	-	antisense	KNOWN	AC007879.5	3	6	-0.125154
chr2	207260445	207270690	207265567	ENSG00000225064.1	+	lincRNA	KNOWN	AC007879.6	1	3	0.104326
chr2	207269275	207269424	207269349	ENSG00000221628.1	-	miRNA	KNOWN	MIR1302-4	1	1	0.091992
chr2	207529737	207603431	207566584	ENSG00000118260.14	+	protein_coding	KNOWN	CREB1	17	9	-0.131620
chr2	207580631	207625928	207603279	ENSG00000144401.14	-	protein_coding	KNOWN	METTL21A	13	5	-0.100223
chr2	207654781	207654951	207654866	ENSG00000223433.1	+	processed_pseudogene	KNOWN	AC079767.3	1	1	-0.252538
chr2	207662375	207667024	207664699	ENSG00000224137.1	+	lincRNA	KNOWN	AC079767.4	1	2	-0.252538
chr2	207680533	207680639	207680586	ENSG00000199251.1	-	snRNA	KNOWN	RNU6-664P	1	1	0.101840
chr2	207681590	207682033	207681811	ENSG00000213082.3	+	processed_pseudogene	KNOWN	PPP1R14BP2	1	1	0.101840
chr2	207687960	207688059	207688009	ENSG00000200764.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.101840
chr2	207711540	207761839	207736689	ENSG00000163249.9	+	protein_coding	KNOWN	CCNYL1	7	11	0.035828
chr2	207753872	207754435	207754153	ENSG00000272851.1	-	antisense	KNOWN	RP11-801F7.1	1	1	-0.226084
chr2	207754807	207754881	207754844	ENSG00000264900.1	+	miRNA	KNOWN	MIR4775	1	1	-0.226084
chr2	207762586	207769563	207766074	ENSG00000163251.3	-	protein_coding	KNOWN	FZD5	1	2	-0.226084
chr2	207821290	207822769	207822029	ENSG00000244567.1	-	lincRNA	KNOWN	AC096772.6	1	2	-0.175781
chr2	207828303	208025560	207926931	ENSG00000178385.13	-	protein_coding	KNOWN	PLEKHM3	3	8	-0.064816
chr2	207868582	207869915	207869248	ENSG00000225111.1	-	sense_intronic	KNOWN	AC083900.1	1	2	-0.345886
chr2	208019638	208019741	208019689	ENSG00000212246.1	-	snRNA	KNOWN	RNU6-360P	1	1	0.124969
chr2	208031383	208031953	208031668	ENSG00000185078.3	-	processed_pseudogene	KNOWN	AC093698.1	1	1	-0.086811
chr2	208054161	208054258	208054209	ENSG00000251941.1	-	rRNA	KNOWN	RNA5SP116	1	1	-0.364386
chr2	208057248	208057745	208057496	ENSG00000224839.1	-	processed_pseudogene	KNOWN	RPL12P17	1	1	-0.364386
chr2	208108233	208112511	208110372	ENSG00000229150.1	-	transcribed_unprocessed_pseudogene	KNOWN	CRYGEP	2	2	-0.075555
chr2	208121607	208124501	208123054	ENSG00000118231.4	-	protein_coding	KNOWN	CRYGD	1	3	0.143522
chr2	208128137	208129830	208128983	ENSG00000163254.4	-	protein_coding	KNOWN	CRYGC	1	3	0.143522
chr2	208135394	208137697	208136545	ENSG00000224529.1	-	processed_pseudogene	KNOWN	AC093698.4	1	2	0.033440
chr2	208142573	208146168	208144370	ENSG00000182187.3	-	protein_coding	KNOWN	CRYGB	1	3	0.033440
chr2	208160740	208163576	208162158	ENSG00000168582.4	-	protein_coding	KNOWN	CRYGA	1	3	-0.299330
chr2	208165343	208190073	208177708	ENSG00000188674.10	-	protein_coding	KNOWN	C2orf80	7	9	-0.391159
chr2	208208135	208208984	208208559	ENSG00000233869.1	+	processed_pseudogene	KNOWN	RPSAP27	1	1	-0.265560
chr2	208214724	208222625	208218674	ENSG00000228111.1	-	processed_pseudogene	KNOWN	TPT1P2	1	2	-0.091720
chr2	208236227	208266074	208251150	ENSG00000138413.13	-	protein_coding	KNOWN	IDH1	9	10	-0.239962
chr2	208255247	208256181	208255714	ENSG00000231908.1	+	antisense	KNOWN	IDH1-AS1	2	2	-0.203833
chr2	208266267	208358751	208312509	ENSG00000115020.16	+	protein_coding	KNOWN	PIKFYVE	9	42	-0.237688
chr2	208269343	208269957	208269650	ENSG00000228380.1	-	processed_pseudogene	KNOWN	MYL6BP1	1	1	-0.203833
chr2	208359714	208854503	208607108	ENSG00000144407.9	+	protein_coding	KNOWN	PTH2R	4	13	-0.576812
chr2	208360631	208361369	208361000	ENSG00000213081.3	-	processed_pseudogene	KNOWN	AC012362.3	1	1	-0.584469
chr2	208466238	208466626	208466432	ENSG00000227430.1	-	processed_pseudogene	KNOWN	AC019185.2	1	1	-0.350952
chr2	208469850	208540413	208505131	ENSG00000231896.1	+	sense_intronic	KNOWN	AC019185.4	1	3	-0.615519
chr2	208516908	208517230	208517069	ENSG00000232409.1	+	processed_pseudogene	KNOWN	AC019185.3	1	1	-0.288280
chr2	208920547	208920664	208920605	ENSG00000202164.1	-	rRNA	KNOWN	RNA5SP117	1	1	-0.183188
chr2	209072597	209074148	209073372	ENSG00000235864.1	-	processed_pseudogene	KNOWN	HSPA8P6	1	1	-0.606627
chr2	209092541	209092629	209092585	ENSG00000276773.1	-	miRNA	NOVEL	AC013409.1	1	1	-0.705700
chr2	209145241	209147687	209146464	ENSG00000232799.1	+	unprocessed_pseudogene	KNOWN	CRYGFP	1	2	-0.535282
chr2	209178804	209182018	209180411	ENSG00000240286.1	+	processed_pseudogene	KNOWN	MEAF6P1	1	2	-0.309525
chr2	209178966	209181123	209180044	ENSG00000229670.2	+	unprocessed_pseudogene	KNOWN	PKP4P1	1	1	-0.309525
chr2	209299795	209299862	209299828	ENSG00000276683.1	-	miRNA	NOVEL	AC016743.1	1	1	-0.518062
chr2	209424058	209734118	209579088	ENSG00000078018.19	+	protein_coding	KNOWN	MAP2	16	15	-0.480486
chr2	209721913	209722021	209721967	ENSG00000222317.1	-	rRNA	KNOWN	RNA5SP118	1	1	-0.592806
chr2	209771993	209999300	209885646	ENSG00000144406.18	+	protein_coding	KNOWN	UNC80	8	64	-0.608055
chr2	209808804	209809580	209809192	ENSG00000237194.1	+	processed_pseudogene	KNOWN	SNAI1P1	1	1	-0.354691
chr2	210002565	210022259	210012412	ENSG00000197713.14	+	protein_coding	KNOWN	RPE	16	7	-0.614643
chr2	210021423	210171383	210096403	ENSG00000144445.16	-	protein_coding	KNOWN	KANSL1L	11	15	-0.505451
chr2	210028417	210029156	210028786	ENSG00000272807.1	+	antisense	KNOWN	RP11-260M2.1	1	1	-0.257244
chr2	210030733	210064356	210047544	ENSG00000229127.1	+	antisense	KNOWN	AC007038.7	1	4	-0.461958
chr2	210088226	210089064	210088645	ENSG00000231063.1	+	processed_pseudogene	KNOWN	AC006994.1	1	1	-0.440356
chr2	210171518	210230383	210200950	ENSG00000231294.1	+	antisense	KNOWN	AC006994.2	1	3	-0.438688
chr2	210187939	210225491	210206715	ENSG00000115361.7	-	protein_coding	KNOWN	ACADL	4	11	-0.544680
chr2	210232692	210233976	210233334	ENSG00000279317.1	+	protein_coding	KNOWN	AC006994.3	1	1	-0.444061
chr2	210265963	210266074	210266018	ENSG00000199203.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.754299
chr2	210290150	210315190	210302670	ENSG00000168530.15	-	protein_coding	KNOWN	MYL1	4	7	-0.442775
chr2	210324759	210469246	210397002	ENSG00000234281.5	+	antisense	KNOWN	LANCL1-AS1	3	6	-0.497934
chr2	210431249	210477652	210454450	ENSG00000115365.11	-	protein_coding	KNOWN	LANCL1	8	10	-0.598075
chr2	210477682	210679107	210578394	ENSG00000021826.14	+	protein_coding	KNOWN	CPS1	12	39	-0.530376
chr2	210617571	210619876	210618723	ENSG00000280837.1	+	sense_intronic	KNOWN	CPS1-IT1	1	1	-0.570973
chr2	211104934	211105732	211105333	ENSG00000271074.1	+	processed_pseudogene	KNOWN	RP11-212J19.1	1	1	-0.476576
chr2	211298941	211299189	211299065	ENSG00000231017.1	-	processed_pseudogene	KNOWN	AC013404.1	1	1	-0.864419
chr2	211375717	212538841	211957279	ENSG00000178568.13	-	protein_coding	KNOWN	ERBB4	9	28	-0.694749
chr2	211535653	211535769	211535711	ENSG00000199585.1	+	rRNA	KNOWN	RNA5SP119	1	1	-0.570973
chr2	211777206	211777856	211777531	ENSG00000232631.1	+	processed_pseudogene	KNOWN	MTND2P23	1	1	-0.797825
chr2	211778075	211778140	211778107	ENSG00000277155.1	+	miRNA	NOVEL	AC105921.1	1	1	-0.797825
chr2	211778273	211779763	211779018	ENSG00000236007.1	+	processed_pseudogene	KNOWN	AC105921.5	1	1	-0.797825
chr2	212426263	212426360	212426311	ENSG00000221782.1	-	miRNA	KNOWN	MIR548F2	1	1	-0.752357
chr2	212581357	213021545	212801451	ENSG00000273118.1	-	sense_overlapping	KNOWN	AC079610.1	1	5	-0.368046
chr2	212763570	212763675	212763622	ENSG00000221388.1	-	miRNA	NOVEL	AC093865.1	1	1	-0.217964
chr2	212795331	212819264	212807297	ENSG00000234308.2	+	lincRNA	KNOWN	AC093381.2	2	5	-0.273541
chr2	212832161	212832945	212832553	ENSG00000231254.2	+	processed_pseudogene	KNOWN	PCED1CP	1	1	-0.100653
chr2	212911003	212919809	212915406	ENSG00000223373.1	+	lincRNA	KNOWN	AC108066.1	1	3	-0.024261
chr2	212926257	212926336	212926296	ENSG00000266354.1	+	miRNA	KNOWN	MIR4776-2	1	1	-0.024261
chr2	212999691	213152427	213076059	ENSG00000030419.16	-	protein_coding	KNOWN	IKZF2	14	9	-0.311048
chr2	213152970	213153659	213153314	ENSG00000270659.1	+	lincRNA	KNOWN	RP11-105N14.1	1	1	-0.257754
chr2	213155806	213167712	213161759	ENSG00000236193.3	-	lincRNA	KNOWN	RP11-105N14.3	1	2	-0.257754
chr2	213266995	213276152	213271573	ENSG00000272519.1	-	lincRNA	KNOWN	RP11-105N14.2	1	2	-0.331632
chr2	213276552	213284205	213280378	ENSG00000196096.3	-	lincRNA	KNOWN	AC079610.2	1	3	-0.265330
chr2	213284379	214410501	213847440	ENSG00000144451.18	+	protein_coding	KNOWN	SPAG16	12	18	-0.426261
chr2	213758067	213758159	213758113	ENSG00000265734.1	+	miRNA	KNOWN	MIR4438	1	1	-0.496752
chr2	214042312	214042417	214042364	ENSG00000275977.1	+	miRNA	NOVEL	AC008169.1	1	1	-0.662356
chr2	214250040	214684246	214467143	ENSG00000197585.9	-	antisense	KNOWN	AC107218.3	2	5	-0.329160
chr2	214280638	214281452	214281045	ENSG00000213917.2	-	processed_pseudogene	KNOWN	RPL5P8	1	1	-0.306998
chr2	214411065	214578959	214495012	ENSG00000174453.9	+	protein_coding	KNOWN	VWC2L	3	4	-0.358556
chr2	214510196	214536890	214523543	ENSG00000224257.1	+	sense_intronic	KNOWN	VWC2L-IT1	1	4	-0.351765
chr2	214697727	214698059	214697893	ENSG00000177261.8	+	processed_pseudogene	KNOWN	ENSAP3	1	1	-0.328851
chr2	214725646	214809711	214767678	ENSG00000138376.10	-	protein_coding	KNOWN	BARD1	14	11	-0.218833
chr2	214810229	214963274	214886751	ENSG00000229267.2	+	antisense	KNOWN	AC072062.1	2	4	-0.193753
chr2	214846947	214847081	214847014	ENSG00000207274.1	+	snoRNA	NOVEL	SNORA70	1	1	0.159106
chr2	214847128	214847445	214847286	ENSG00000230076.1	+	processed_pseudogene	KNOWN	AC016708.2	1	1	0.159106
chr2	214931542	215138428	215034985	ENSG00000144452.14	-	protein_coding	KNOWN	ABCA12	3	53	-0.467604
chr2	215004782	215085488	215045135	ENSG00000227769.7	+	antisense	KNOWN	AC072062.3	12	9	-0.545579
chr2	215274992	215277947	215276469	ENSG00000237571.1	+	lincRNA	KNOWN	AC073284.4	1	3	-0.422581
chr2	215311817	215349773	215330795	ENSG00000138363.14	+	protein_coding	KNOWN	ATIC	14	16	0.096416
chr2	215360440	215436172	215398306	ENSG00000115414.18	-	protein_coding	KNOWN	FN1	27	47	0.387252
chr2	215436253	215436992	215436622	ENSG00000230695.1	+	antisense	KNOWN	AC012462.1	1	2	0.438795
chr2	215453707	215463871	215458789	ENSG00000225166.1	+	lincRNA	KNOWN	AC012462.2	1	4	0.000493
chr2	215476667	215480248	215478457	ENSG00000228618.1	+	lincRNA	KNOWN	AC012462.3	1	2	0.180430
chr2	215530447	215545526	215537986	ENSG00000234938.2	-	lincRNA	KNOWN	AC012668.1	1	5	0.199438
chr2	215533133	215713895	215623514	ENSG00000237525.6	+	lincRNA	KNOWN	AC012668.2	3	8	0.072694
chr2	215579407	215582635	215581021	ENSG00000227981.2	-	lincRNA	KNOWN	AC012668.3	1	2	-0.239717
chr2	215611563	215843722	215727642	ENSG00000235770.5	-	lincRNA	KNOWN	LINC00607	6	10	0.176530
chr2	215718043	215719424	215718733	ENSG00000230838.1	+	lincRNA	KNOWN	LINC01614	1	2	0.216082
chr2	215804731	215804981	215804856	ENSG00000216721.3	-	processed_pseudogene	KNOWN	AC093850.1	1	1	0.435691
chr2	215869923	215870518	215870220	ENSG00000227824.1	+	lincRNA	KNOWN	AC122136.2	1	2	0.365167
chr2	215878833	215878919	215878876	ENSG00000212055.1	-	miRNA	NOVEL	AC122136.1	1	1	0.360640
chr2	215939308	215941719	215940513	ENSG00000226276.1	-	lincRNA	KNOWN	AC093382.1	1	2	0.270137
chr2	215942805	216034096	215988450	ENSG00000118242.15	-	protein_coding	KNOWN	MREG	5	6	0.209987
chr2	215996329	216082955	216039642	ENSG00000115425.13	-	protein_coding	KNOWN	PECR	8	8	0.226020
chr2	216081866	216102783	216092324	ENSG00000163449.10	+	protein_coding	KNOWN	TMEM169	6	4	0.139269
chr2	216107464	216206303	216156883	ENSG00000079246.15	+	protein_coding	KNOWN	XRCC5	10	23	0.111738
chr2	216156342	216156811	216156576	ENSG00000232970.1	-	processed_pseudogene	KNOWN	POLHP1	1	1	0.062992
chr2	216174896	216176032	216175464	ENSG00000236478.2	-	processed_pseudogene	KNOWN	AC012513.4	1	1	0.114832
chr2	216211404	216213519	216212461	ENSG00000279348.1	+	TEC	KNOWN	RP11-566E18.1	1	1	0.253743
chr2	216217045	216220192	216218618	ENSG00000260804.3	+	lincRNA	KNOWN	PKI55	1	1	0.253743
chr2	216257865	216372027	216314946	ENSG00000144583.4	-	protein_coding	KNOWN	MARCH4	1	4	0.351370
chr2	216259595	216266130	216262862	ENSG00000231092.1	+	antisense	KNOWN	AC012513.6	1	2	0.329981
chr2	216303325	216321737	216312531	ENSG00000233581.1	+	antisense	KNOWN	AC069155.1	1	3	0.315828
chr2	216351403	216351504	216351453	ENSG00000207303.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.461226
chr2	216385288	216412696	216398992	ENSG00000235042.1	-	antisense	KNOWN	AC098820.2	1	5	0.072654
chr2	216412414	216483053	216447733	ENSG00000138375.12	+	protein_coding	KNOWN	SMARCAL1	13	18	0.367857
chr2	216479030	216498761	216488895	ENSG00000232485.2	-	processed_transcript	KNOWN	AC098820.3	3	3	0.297687
chr2	216483032	216487196	216485114	ENSG00000241520.1	-	antisense	KNOWN	AC098820.4	1	2	0.130466
chr2	216498189	216579180	216538684	ENSG00000197756.9	+	protein_coding	KNOWN	RPL37A	13	5	0.369937
chr2	216590426	216606938	216598682	ENSG00000224391.1	-	antisense	KNOWN	LINC01280	1	4	0.162695
chr2	216604771	216611202	216607986	ENSG00000225794.1	+	lincRNA	KNOWN	AC073321.4	1	2	0.178412
chr2	216610342	216610959	216610650	ENSG00000235444.2	-	processed_pseudogene	KNOWN	PSMB3P2	1	1	0.246714
chr2	216632828	216664436	216648632	ENSG00000115457.9	+	protein_coding	KNOWN	IGFBP2	5	4	0.506814
chr2	216672105	216695525	216683815	ENSG00000115461.4	-	protein_coding	KNOWN	IGFBP5	3	4	0.895220
chr2	216694464	216994079	216844271	ENSG00000236886.2	+	antisense	KNOWN	AC007563.5	2	4	0.279954
chr2	216785774	216786144	216785959	ENSG00000237930.1	-	processed_pseudogene	KNOWN	AC007563.4	1	1	0.534836
chr2	216793489	216793600	216793544	ENSG00000222832.1	-	rRNA	KNOWN	RNA5SP120	1	1	0.477543
chr2	216799608	216805335	216802471	ENSG00000229352.1	+	lincRNA	KNOWN	AC007563.3	1	2	0.477543
chr2	216805737	216806129	216805933	ENSG00000234588.1	-	processed_pseudogene	KNOWN	FABP5P14	1	1	0.477543
chr2	216854389	216855132	216854760	ENSG00000231597.1	-	antisense	KNOWN	AC007557.4	1	2	-0.012345
chr2	216859458	216860064	216859761	ENSG00000118245.2	-	protein_coding	KNOWN	TNP1	1	2	-0.012345
chr2	216863059	216865281	216864170	ENSG00000278951.1	+	protein_coding	KNOWN	AC007557.5	1	3	-0.012345
chr2	216866332	216867813	216867072	ENSG00000237479.1	-	antisense	KNOWN	AC007557.2	1	2	-0.012345
chr2	216868012	216869156	216868584	ENSG00000227021.1	+	lincRNA	KNOWN	AC007557.3	1	2	-0.012345
chr2	216870441	216873932	216872186	ENSG00000236295.1	-	lincRNA	KNOWN	AC007563.1	1	2	0.261011
chr2	216870772	216871639	216871205	ENSG00000223874.1	+	lincRNA	KNOWN	AC007557.1	1	2	0.261011
chr2	216995906	216996490	216996198	ENSG00000259855.1	+	lincRNA	KNOWN	RP11-574O16.1	1	1	0.595424
chr2	217176498	217176582	217176540	ENSG00000251849.1	+	miRNA	NOVEL	AC010887.1	1	1	-0.009704
chr2	217251556	217251875	217251715	ENSG00000251982.1	+	misc_RNA	KNOWN	RN7SKP43	1	1	0.251190
chr2	217282739	217336120	217309429	ENSG00000233143.1	+	lincRNA	KNOWN	DIRC3-AS1	1	5	0.346324
chr2	217283370	217283523	217283446	ENSG00000278004.1	+	misc_RNA	NOVEL	Pinc	1	1	0.448136
chr2	217284019	217756593	217520306	ENSG00000231672.6	-	protein_coding	KNOWN	DIRC3	4	12	0.284103
chr2	217693895	217696763	217695329	ENSG00000224414.1	+	processed_pseudogene	KNOWN	AC010886.2	1	1	0.265475
chr2	217760547	217761291	217760919	ENSG00000231035.1	-	processed_pseudogene	KNOWN	RPL7L1P9	1	1	0.402332
chr2	217799789	218002995	217901392	ENSG00000079308.16	-	protein_coding	KNOWN	TNS1	21	33	0.855154
chr2	217900513	217900628	217900570	ENSG00000275458.1	-	miRNA	KNOWN	MIR6809	1	1	0.886131
chr2	217978707	217992615	217985661	ENSG00000223923.1	+	antisense	KNOWN	AC010136.2	1	4	0.685796
chr2	218034960	218090581	218062770	ENSG00000188282.12	+	protein_coding	KNOWN	RUFY4	10	14	0.624022
chr2	218059155	218065729	218062442	ENSG00000229754.1	-	transcribed_unprocessed_pseudogene	KNOWN	CXCR2P1	2	2	0.115708
chr2	218125289	218137253	218131271	ENSG00000180871.7	+	protein_coding	KNOWN	CXCR2	7	4	0.447386
chr2	218162845	218166995	218164920	ENSG00000163464.7	-	protein_coding	KNOWN	CXCR1	1	2	0.773359
chr2	218179386	218179453	218179419	ENSG00000277115.1	+	miRNA	NOVEL	AC097483.1	1	1	0.566530
chr2	218200434	218201388	218200911	ENSG00000224159.1	+	processed_pseudogene	KNOWN	HMGB1P9	1	2	0.458234
chr2	218217094	218254356	218235725	ENSG00000163466.15	+	protein_coding	KNOWN	ARPC2	18	11	0.531519
chr2	218255319	218257366	218256342	ENSG00000261338.2	+	sense_overlapping	KNOWN	RP11-378A13.1	1	1	0.671479
chr2	218259496	218263859	218261677	ENSG00000179921.14	+	protein_coding	KNOWN	GPBAR1	4	2	0.671479
chr2	218264123	218270257	218267190	ENSG00000127837.9	-	protein_coding	KNOWN	AAMP	10	11	0.688820
chr2	218270392	218346793	218308592	ENSG00000127838.13	+	protein_coding	KNOWN	PNKD	8	10	0.925962
chr2	218274192	218292586	218283389	ENSG00000135926.12	-	protein_coding	KNOWN	TMBIM1	23	13	1.073104
chr2	218280125	218280188	218280156	ENSG00000274203.1	-	miRNA	KNOWN	MIR6513	1	1	1.083771
chr2	218326889	218357966	218342427	ENSG00000237281.1	-	antisense	KNOWN	CATIP-AS2	1	4	0.828037
chr2	218341911	218341980	218341945	ENSG00000278524.1	+	miRNA	KNOWN	MIR6810	1	1	0.927067
chr2	218354075	218354572	218354323	ENSG00000230580.1	+	processed_pseudogene	KNOWN	AC021016.7	1	1	0.633961
chr2	218356856	218368099	218362477	ENSG00000158428.3	+	protein_coding	KNOWN	CATIP	5	10	0.633961
chr2	218366665	218367835	218367250	ENSG00000225062.1	-	processed_transcript	KNOWN	CATIP-AS1	2	3	0.633961
chr2	218382029	218396894	218389461	ENSG00000018280.16	+	protein_coding	KNOWN	SLC11A1	18	16	0.924182
chr2	218398256	218405941	218402098	ENSG00000144579.7	+	protein_coding	KNOWN	CTDSP1	15	7	1.105886
chr2	218398743	218399219	218398981	ENSG00000273361.1	-	antisense	KNOWN	RP11-378A13.2	1	1	1.105886
chr2	218402637	218402746	218402691	ENSG00000199121.3	+	miRNA	KNOWN	MIR26B	1	1	1.105886
chr2	218419092	218453295	218436193	ENSG00000127831.10	+	protein_coding	KNOWN	VIL1	5	20	0.995503
chr2	218450251	218568361	218509306	ENSG00000135913.10	-	protein_coding	KNOWN	USP37	11	26	0.520485
chr2	218500729	218501037	218500883	ENSG00000222714.1	-	misc_RNA	KNOWN	RN7SKP38	1	1	0.604726
chr2	218568580	218597080	218582830	ENSG00000144580.13	+	protein_coding	KNOWN	RQCD1	9	9	0.404673
chr2	218589214	218589320	218589267	ENSG00000207393.1	-	snRNA	KNOWN	RNU6-136P	1	1	0.406724
chr2	218607765	218637184	218622474	ENSG00000115556.13	+	protein_coding	KNOWN	PLCD4	15	17	0.687939
chr2	218633256	218634014	218633635	ENSG00000273466.1	-	antisense	KNOWN	RP11-548H3.1	1	1	0.744826
chr2	218637916	218659655	218648785	ENSG00000115568.15	-	protein_coding	KNOWN	ZNF142	7	11	0.783579
chr2	218658764	218663443	218661103	ENSG00000074582.12	+	protein_coding	KNOWN	BCS1L	20	9	0.832073
chr2	218663864	218672411	218668137	ENSG00000163481.7	-	protein_coding	KNOWN	RNF25	6	10	0.852817
chr2	218672026	218702716	218687371	ENSG00000163482.11	+	protein_coding	KNOWN	STK36	16	27	0.734424
chr2	218710845	218755416	218733130	ENSG00000135912.10	+	protein_coding	KNOWN	TTLL4	21	20	0.632416
chr2	218781749	218815293	218798521	ENSG00000135929.8	+	protein_coding	KNOWN	CYP27A1	5	9	0.445570
chr2	218818690	218819144	218818917	ENSG00000272555.1	+	lincRNA	KNOWN	RP11-459I19.1	1	1	0.329683
chr2	218822383	218832086	218827234	ENSG00000115592.11	-	protein_coding	KNOWN	PRKAG3	6	14	0.371904
chr2	218841599	218842065	218841832	ENSG00000232625.1	+	processed_pseudogene	KNOWN	RPL23AP31	1	1	0.525978
chr2	218859821	218874233	218867027	ENSG00000115596.3	+	protein_coding	KNOWN	WNT6	2	4	0.859091
chr2	218880363	218899581	218889972	ENSG00000135925.8	+	protein_coding	KNOWN	WNT10A	4	4	0.770884
chr2	218900811	218930636	218915723	ENSG00000228135.1	-	antisense	KNOWN	LINC01494	1	5	0.513498
chr2	218916184	218916287	218916235	ENSG00000200029.1	-	snRNA	KNOWN	RNU6-642P	1	1	0.396471
chr2	218944629	218961903	218953266	ENSG00000235024.1	-	antisense	KNOWN	AC097468.7	1	2	0.711864
chr2	218953401	218954050	218953725	ENSG00000224928.2	-	processed_pseudogene	KNOWN	KRT8P30	1	1	0.836433
chr2	218959655	218962162	218960908	ENSG00000171450.5	+	protein_coding	KNOWN	CDK5R2	1	1	0.836433
chr2	218975393	218989940	218982666	ENSG00000236445.4	+	antisense	KNOWN	LINC00608	7	4	0.442997
chr2	218981087	218985657	218983372	ENSG00000163497.2	-	protein_coding	KNOWN	FEV	2	3	0.442997
chr2	218990189	218993421	218991805	ENSG00000163499.11	-	protein_coding	KNOWN	CRYBA2	6	5	0.824579
chr2	219001628	219001739	219001683	ENSG00000198973.3	-	miRNA	KNOWN	MIR375	1	1	0.824579
chr2	219002215	219015721	219008968	ENSG00000224090.1	+	antisense	KNOWN	AC097468.4	1	3	0.858035
chr2	219002846	219041527	219022186	ENSG00000181378.13	-	protein_coding	KNOWN	CCDC108	13	35	0.895876
chr2	219054420	219060467	219057443	ENSG00000163501.6	-	protein_coding	KNOWN	IHH	1	3	0.877253
chr2	219058688	219058750	219058719	ENSG00000264755.1	-	miRNA	KNOWN	MIR3131	1	1	0.877253
chr2	219069354	219069809	219069581	ENSG00000272644.1	-	lincRNA	KNOWN	RP11-33O4.1	1	1	0.877253
chr2	219075317	219160865	219118091	ENSG00000187736.12	-	protein_coding	KNOWN	NHEJ1	10	9	0.634962
chr2	219075329	219170827	219123078	ENSG00000280537.2	-	protein_coding	KNOWN	RP11-33O4.2	2	17	0.630859
chr2	219102434	219102719	219102576	ENSG00000240317.3	+	misc_RNA	KNOWN	RN7SL764P	1	1	0.510821
chr2	219161465	219170095	219165780	ENSG00000213901.10	-	protein_coding	KNOWN	SLC23A3	10	12	0.564154
chr2	219171897	219178106	219175001	ENSG00000115649.15	-	protein_coding	KNOWN	CNPPD1	4	9	0.996918
chr2	219176225	219185479	219180852	ENSG00000144567.10	+	protein_coding	KNOWN	FAM134A	10	9	0.996918
chr2	219195237	219209651	219202444	ENSG00000158552.12	+	protein_coding	KNOWN	ZFAND2B	21	10	0.817629
chr2	219209768	219218990	219214379	ENSG00000115657.12	-	protein_coding	KNOWN	ABCB6	13	19	1.178406
chr2	219209772	219229717	219219744	ENSG00000198925.10	-	protein_coding	KNOWN	ATG9A	22	22	1.183463
chr2	219224023	219224105	219224064	ENSG00000221344.1	-	miRNA	NOVEL	AC068946.1	1	1	1.187675
chr2	219229757	219236669	219233213	ENSG00000163516.13	+	protein_coding	KNOWN	ANKZF1	26	14	1.002495
chr2	219236606	219245478	219241042	ENSG00000163521.15	-	protein_coding	KNOWN	GLB1L	12	17	0.995776
chr2	219245455	219250337	219247896	ENSG00000115661.13	+	protein_coding	KNOWN	STK16	13	8	1.004330
chr2	219249711	219278170	219263940	ENSG00000127824.13	-	protein_coding	KNOWN	TUBA4A	10	4	1.056622
chr2	219253243	219272188	219262715	ENSG00000243910.7	+	protein_coding	KNOWN	TUBA4B	3	4	1.094594
chr2	219279267	219286900	219283083	ENSG00000135924.15	+	protein_coding	KNOWN	DNAJB2	18	10	0.905291
chr2	219289623	219309648	219299635	ENSG00000054356.13	-	protein_coding	KNOWN	PTPRN	19	23	0.990819
chr2	219294111	219294200	219294155	ENSG00000207647.1	-	miRNA	KNOWN	MIR153-1	1	1	0.992456
chr2	219299002	219304130	219301566	ENSG00000230432.1	+	antisense	KNOWN	AC114803.3	1	3	0.992456
chr2	219327409	219333177	219330293	ENSG00000182698.11	-	protein_coding	KNOWN	RESP18	3	7	0.791381
chr2	219358870	219358983	219358926	ENSG00000232789.1	-	unprocessed_pseudogene	KNOWN	AC053503.2	1	1	0.733337
chr2	219373546	219400022	219386784	ENSG00000123992.18	-	protein_coding	KNOWN	DNPEP	21	16	1.037097
chr2	219388496	219403633	219396064	ENSG00000229525.1	+	antisense	KNOWN	AC053503.4	1	2	0.919365
chr2	219418377	219426739	219422558	ENSG00000175084.11	+	protein_coding	KNOWN	DES	4	9	1.254659
chr2	219425071	219426184	219425627	ENSG00000234638.1	-	antisense	KNOWN	AC053503.6	1	2	1.254659
chr2	219427477	219429319	219428398	ENSG00000280323.1	+	TEC	KNOWN	AC053503.12	1	1	1.254659
chr2	219434846	219498287	219466566	ENSG00000072195.14	+	protein_coding	KNOWN	SPEG	25	41	1.329072
chr2	219482073	219516877	219499475	ENSG00000227432.1	-	antisense	KNOWN	AC053503.11	1	2	1.607191
chr2	219497611	219498246	219497928	ENSG00000268603.1	-	antisense	KNOWN	RP11-316O14.1	1	1	1.652707
chr2	219498867	219506989	219502928	ENSG00000144591.18	+	protein_coding	KNOWN	GMPPA	14	13	1.652707
chr2	219514170	219538772	219526471	ENSG00000072182.12	+	protein_coding	KNOWN	ASIC4	5	10	1.478852
chr2	219538947	219543787	219541367	ENSG00000123989.13	-	protein_coding	KNOWN	CHPF	3	4	1.168749
chr2	219543663	219550595	219547129	ENSG00000188760.10	+	protein_coding	KNOWN	TMEM198	4	6	1.188000
chr2	219547211	219547658	219547434	ENSG00000268896.1	-	antisense	KNOWN	RP11-256I23.1	1	1	1.168749
chr2	219549073	219549147	219549110	ENSG00000265252.1	-	miRNA	KNOWN	MIR3132	1	1	1.168749
chr2	219550729	219571859	219561294	ENSG00000124006.14	-	protein_coding	KNOWN	OBSL1	15	21	1.381787
chr2	219559083	219559626	219559354	ENSG00000269068.1	+	antisense	KNOWN	RP11-256I23.2	1	1	1.392651
chr2	219569162	219575713	219572437	ENSG00000123999.4	+	protein_coding	KNOWN	INHA	2	2	1.285001
chr2	219590687	219590984	219590835	ENSG00000222678.1	-	misc_RNA	KNOWN	RN7SKP213	1	1	0.955746
chr2	219597860	219616451	219607155	ENSG00000144589.20	+	protein_coding	KNOWN	STK11IP	15	25	0.949595
chr2	219625059	219626693	219625876	ENSG00000228973.1	-	antisense	KNOWN	AC009955.8	1	2	0.938021
chr2	219627327	219641980	219634653	ENSG00000114923.16	+	protein_coding	KNOWN	SLC4A3	9	23	0.995314
chr2	219645090	219645631	219645360	ENSG00000267919.1	+	lincRNA	KNOWN	RP11-256I23.3	1	1	1.008091
chr2	219684030	219684795	219684412	ENSG00000231802.1	-	processed_pseudogene	KNOWN	AC009502.1	1	1	0.461941
chr2	219685381	219737937	219711659	ENSG00000227308.2	+	lincRNA	KNOWN	AC009502.4	4	2	0.503744
chr2	219697799	219698214	219698006	ENSG00000223903.1	+	processed_pseudogene	KNOWN	RPL23P4	1	1	0.552063
chr2	219904051	219904889	219904470	ENSG00000228909.1	-	lincRNA	KNOWN	AC008281.1	1	3	-0.084259
chr2	219906502	219906565	219906533	ENSG00000266518.1	-	miRNA	KNOWN	MIR4268	1	1	-0.084259
chr2	220048822	220049272	220049047	ENSG00000225911.1	-	processed_pseudogene	KNOWN	AC009310.1	1	1	0.057393
chr2	220105656	220450778	220278217	ENSG00000239498.1	+	lincRNA	KNOWN	AC114765.1	1	4	0.078283
chr2	220127546	220212491	220170018	ENSG00000235337.1	+	lincRNA	KNOWN	AC114765.2	1	3	0.058430
chr2	220191878	220191956	220191917	ENSG00000221199.1	+	miRNA	NOVEL	AC114765.3	1	1	0.161366
chr2	220450679	220704566	220577622	ENSG00000236451.2	+	lincRNA	KNOWN	AC067956.1	1	5	0.050591
chr2	220476983	220477092	220477037	ENSG00000222096.1	-	miRNA	NOVEL	AC019051.1	1	1	-0.059126
chr2	220791078	220797893	220794485	ENSG00000224819.1	+	lincRNA	KNOWN	AC093843.1	1	2	-0.104073
chr2	221120764	221120839	221120801	ENSG00000281701.1	+	miRNA	NOVEL	AC093160.1	1	1	0.082773
chr2	221162771	221163053	221162912	ENSG00000232089.1	+	processed_pseudogene	KNOWN	AC011233.2	1	1	-0.098111
chr2	221418027	221574202	221496114	ENSG00000116106.11	-	protein_coding	KNOWN	EPHA4	14	18	-0.026148
chr2	221519564	221519657	221519610	ENSG00000221432.1	-	miRNA	NOVEL	AC079834.2	1	1	0.013136
chr2	221532668	221533008	221532838	ENSG00000226726.1	+	processed_pseudogene	KNOWN	TMEM256P2	1	1	0.115324
chr2	221572506	221574454	221573480	ENSG00000272944.1	+	antisense	KNOWN	CTD-2308L22.1	1	1	0.292456
chr2	221592441	221592861	221592651	ENSG00000230406.2	+	processed_pseudogene	KNOWN	AC079834.1	1	1	-0.410509
chr2	221637543	221641813	221639678	ENSG00000234446.2	+	lincRNA	KNOWN	AC068489.1	1	2	-0.131904
chr2	221944223	221944612	221944417	ENSG00000233868.1	+	processed_pseudogene	KNOWN	AC009302.2	1	1	-0.462869
chr2	221961737	221963765	221962751	ENSG00000226666.1	+	processed_pseudogene	KNOWN	HSPA9P1	1	1	-0.294425
chr2	222044525	222044994	222044759	ENSG00000226331.1	-	processed_pseudogene	KNOWN	RPL23AP28	1	1	-0.273658
chr2	222199888	222298996	222249442	ENSG00000135903.18	-	protein_coding	KNOWN	PAX3	10	10	-0.097637
chr2	222298147	222305217	222301682	ENSG00000163081.2	+	protein_coding	KNOWN	CCDC140	2	2	0.002557
chr2	222317242	222318653	222317947	ENSG00000267034.1	-	lincRNA	KNOWN	RP11-384O8.1	1	1	0.342399
chr2	222318275	222352989	222335632	ENSG00000237732.9	+	transcribed_unprocessed_pseudogene	KNOWN	AC010980.2	8	3	0.083556
chr2	222404985	222405095	222405040	ENSG00000200822.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.359219
chr2	222424517	222560948	222492732	ENSG00000163082.9	+	protein_coding	KNOWN	SGPP2	1	5	-0.219281
chr2	222452400	222453126	222452763	ENSG00000228670.4	-	processed_pseudogene	KNOWN	NANOGP2	1	1	-0.147679
chr2	222498291	222498398	222498344	ENSG00000202016.1	+	snRNA	KNOWN	RNU6-619P	1	1	-0.308249
chr2	222503883	222504843	222504363	ENSG00000234285.1	-	processed_pseudogene	KNOWN	GAPDHP49	1	1	-0.308249
chr2	222566899	222569719	222568309	ENSG00000261428.2	-	antisense	KNOWN	RP11-16P6.1	1	1	-0.212342
chr2	222570536	222656337	222613436	ENSG00000116120.9	-	protein_coding	KNOWN	FARSB	1	17	-0.169053
chr2	222671786	222709930	222690858	ENSG00000124003.12	+	protein_coding	KNOWN	MOGAT1	1	6	-0.181790
chr2	222677677	222678289	222677983	ENSG00000233751.1	-	processed_pseudogene	KNOWN	AC104772.1	1	1	-0.343224
chr2	222698623	222699484	222699053	ENSG00000203531.3	-	processed_pseudogene	KNOWN	AC016712.1	1	1	-0.034272
chr2	222726457	222726834	222726645	ENSG00000235225.1	+	processed_pseudogene	KNOWN	AC016712.2	1	1	-0.134284
chr2	222793093	222793180	222793136	ENSG00000264133.3	-	miRNA	NOVEL	AC016712.3	1	1	0.243995
chr2	222860934	222944639	222902786	ENSG00000123983.13	+	protein_coding	KNOWN	ACSL3	11	17	0.026360
chr2	222904640	222905055	222904847	ENSG00000224121.1	-	processed_pseudogene	KNOWN	ATG12P2	1	1	0.091992
chr2	222917387	222919363	222918375	ENSG00000234193.1	-	antisense	KNOWN	AC097461.4	1	2	-0.000619
chr2	222932594	222932683	222932638	ENSG00000265621.1	-	miRNA	NOVEL	AC013476.1	1	1	-0.089178
chr2	222945930	222946388	222946159	ENSG00000278083.1	-	processed_pseudogene	KNOWN	RP11-525G12.1	1	1	-0.089178
chr2	223051814	223198399	223125106	ENSG00000152049.6	+	protein_coding	KNOWN	KCNE4	2	4	-0.060391
chr2	223248498	223248794	223248646	ENSG00000243125.3	-	misc_RNA	KNOWN	RN7SL807P	1	1	-0.204540
chr2	223398267	223398546	223398406	ENSG00000233299.1	-	processed_pseudogene	KNOWN	HIGD1AP4	1	1	-0.474708
chr2	223454265	223454402	223454333	ENSG00000281033.1	-	miRNA	NOVEL	AC013448.3	1	1	-0.025660
chr2	223498773	223504611	223501692	ENSG00000231189.1	+	lincRNA	KNOWN	AC013448.1	1	3	0.154923
chr2	223505476	223510933	223508204	ENSG00000235610.1	+	lincRNA	KNOWN	AC013448.2	1	2	0.046659
chr2	223596940	223602503	223599721	ENSG00000171951.4	-	protein_coding	KNOWN	SCG2	3	3	-0.123276
chr2	223704621	223705338	223704979	ENSG00000226539.1	+	processed_pseudogene	KNOWN	AC012512.1	1	1	-0.143496
chr2	223751686	223838027	223794856	ENSG00000152056.16	-	protein_coding	KNOWN	AP1S3	8	6	0.177234
chr2	223855716	223945387	223900551	ENSG00000085449.14	-	protein_coding	KNOWN	WDFY1	6	12	0.199967
chr2	223857154	223857425	223857289	ENSG00000281046.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.231717
chr2	223957404	223967714	223962559	ENSG00000135900.3	+	protein_coding	KNOWN	MRPL44	1	4	0.200768
chr2	223965701	223967706	223966703	ENSG00000228802.1	-	antisense	KNOWN	AC073641.2	1	2	0.200768
chr2	223975112	224039319	224007215	ENSG00000135919.12	-	protein_coding	KNOWN	SERPINE2	10	10	0.085235
chr2	224169664	224171537	224170600	ENSG00000224826.1	+	processed_pseudogene	KNOWN	AC019109.1	1	1	0.250147
chr2	224239462	224239556	224239509	ENSG00000211987.2	-	miRNA	NOVEL	AC104802.1	1	1	-0.060860
chr2	224294930	224295753	224295341	ENSG00000228681.1	+	processed_pseudogene	KNOWN	AC008072.1	1	1	-0.123737
chr2	224378698	224402085	224390391	ENSG00000124019.9	-	protein_coding	KNOWN	FAM124B	3	3	-0.084408
chr2	224464682	224474500	224469591	ENSG00000274629.1	+	antisense	KNOWN	RP11-92F20.1	2	3	-0.065868
chr2	224470150	224585397	224527773	ENSG00000036257.12	-	protein_coding	KNOWN	CUL3	16	16	-0.115881
chr2	224499387	224500100	224499743	ENSG00000228446.2	-	processed_pseudogene	KNOWN	AC073052.1	1	1	-0.138128
chr2	224765090	225042445	224903767	ENSG00000135905.18	-	protein_coding	KNOWN	DOCK10	13	56	-0.069381
chr2	225010461	225010540	225010500	ENSG00000263828.1	-	miRNA	KNOWN	MIR4439	1	1	0.119826
chr2	225399710	225400588	225400149	ENSG00000232784.1	+	lincRNA	KNOWN	AC067961.1	1	2	-0.505910
chr2	225400648	225654018	225527333	ENSG00000144460.11	+	protein_coding	KNOWN	NYAP2	1	6	-0.395617
chr2	225698254	225698539	225698396	ENSG00000228206.2	+	processed_pseudogene	KNOWN	AC016717.1	1	1	-0.335429
chr2	225698514	225703654	225701084	ENSG00000273301.1	+	lincRNA	KNOWN	RP11-314B1.2	1	1	-0.335429
chr2	225761559	225762112	225761835	ENSG00000279015.1	+	TEC	KNOWN	RP11-314B1.1	1	1	-0.634990
chr2	225992981	225993197	225993089	ENSG00000230621.1	-	processed_pseudogene	KNOWN	AC080002.1	1	1	-0.453442
chr2	226180044	226185371	226182707	ENSG00000235070.3	-	lincRNA	KNOWN	AC068138.1	1	2	-0.433099
chr2	226658710	226658793	226658751	ENSG00000263363.1	-	miRNA	KNOWN	MIR5702	1	1	-0.109642
chr2	226731317	226799759	226765538	ENSG00000169047.5	-	protein_coding	KNOWN	IRS1	2	2	-0.150952
chr2	226800146	226811029	226805587	ENSG00000272622.1	+	lincRNA	KNOWN	RP11-395N3.2	1	4	-0.105883
chr2	226804036	226805061	226804548	ENSG00000261379.1	+	sense_intronic	KNOWN	RP11-395N3.1	1	1	-0.094160
chr2	226835581	226999215	226917398	ENSG00000144468.16	+	protein_coding	KNOWN	RHBDD1	15	9	-0.116817
chr2	226968989	226969122	226969055	ENSG00000212391.1	-	snoRNA	NOVEL	SNORA48	1	1	-0.237316
chr2	227002711	227164113	227083412	ENSG00000081052.11	-	protein_coding	KNOWN	COL4A4	1	48	-0.182937
chr2	227124243	227124358	227124300	ENSG00000221608.1	+	miRNA	NOVEL	AC079235.1	1	1	-0.357139
chr2	227164565	227314792	227239678	ENSG00000169031.18	+	protein_coding	KNOWN	COL4A3	6	52	-0.361009
chr2	227221052	227325201	227273126	ENSG00000236432.7	-	antisense	KNOWN	AC097662.2	5	14	-0.299067
chr2	227325151	227357836	227341493	ENSG00000168958.19	+	protein_coding	KNOWN	MFF	27	11	-0.094741
chr2	227362156	227381995	227372075	ENSG00000168955.3	-	protein_coding	KNOWN	TM4SF20	2	4	-0.239758
chr2	227472132	227472187	227472159	ENSG00000266382.1	+	miRNA	KNOWN	MIR5703	1	1	-0.115700
chr2	227472152	227561214	227516683	ENSG00000173744.17	+	protein_coding	KNOWN	AGFG1	8	14	-0.255186
chr2	227610090	227633320	227621705	ENSG00000042304.10	-	protein_coding	KNOWN	C2orf83	2	4	-0.155585
chr2	227616998	227617790	227617394	ENSG00000236116.1	-	sense_intronic	KNOWN	AC064853.2	1	2	-0.117236
chr2	227632969	227648606	227640787	ENSG00000250599.1	-	unprocessed_pseudogene	KNOWN	AC064853.3	1	4	-0.385486
chr2	227685210	227718012	227701611	ENSG00000135917.13	-	protein_coding	KNOWN	SLC19A3	8	7	-0.330174
chr2	227763052	227763152	227763102	ENSG00000252346.1	-	rRNA	KNOWN	RNA5SP121	1	1	-0.145337
chr2	227778510	227778735	227778622	ENSG00000226718.1	-	processed_pseudogene	KNOWN	SNRPGP8	1	1	0.176881
chr2	227801840	227804705	227803272	ENSG00000229172.1	+	processed_pseudogene	KNOWN	AC073065.3	1	1	-0.463069
chr2	227813842	227817564	227815703	ENSG00000115009.11	+	protein_coding	KNOWN	CCL20	4	4	-0.074827
chr2	227870083	227870644	227870363	ENSG00000183514.4	-	processed_pseudogene	KNOWN	TDGF1P2	1	1	0.146148
chr2	227871054	227924344	227897699	ENSG00000123977.9	+	protein_coding	KNOWN	DAW1	5	14	-0.371776
chr2	227887631	227887744	227887687	ENSG00000272237.1	+	snoRNA	NOVEL	SNORA25	1	1	0.146148
chr2	227979950	228181645	228080797	ENSG00000153820.12	-	protein_coding	KNOWN	SPHKAP	3	12	-0.475201
chr2	228169743	228169849	228169796	ENSG00000200281.1	+	snRNA	KNOWN	RNU6-624P	1	1	-0.428482
chr2	228352120	228353215	228352667	ENSG00000203387.2	-	processed_pseudogene	KNOWN	AC074019.2	1	1	-0.518506
chr2	228483261	228611395	228547328	ENSG00000232023.2	-	lincRNA	KNOWN	AC009410.1	1	4	-0.361751
chr2	228683537	228684580	228684058	ENSG00000228226.1	-	lincRNA	KNOWN	AC074019.1	1	2	-0.286520
chr2	228753324	228753786	228753555	ENSG00000237322.1	+	processed_pseudogene	KNOWN	RPL7L1P10	1	1	-0.280920
chr2	228850526	229271285	229060905	ENSG00000153823.18	-	protein_coding	KNOWN	PID1	6	4	-0.362564
chr2	229003886	229004400	229004143	ENSG00000226297.1	+	processed_pseudogene	KNOWN	AC007677.2	1	1	-0.730550
chr2	229236340	229236609	229236474	ENSG00000253006.1	-	misc_RNA	KNOWN	RN7SKP283	1	1	-0.159141
chr2	229357629	229714558	229536093	ENSG00000187957.7	-	protein_coding	KNOWN	DNER	2	13	-0.224328
chr2	229606238	229606299	229606268	ENSG00000238782.1	+	snRNA	KNOWN	RNU7-9P	1	1	-0.242077
chr2	229701794	229702148	229701971	ENSG00000235993.1	+	processed_pseudogene	KNOWN	AC007559.1	1	1	-0.139334
chr2	229763838	229923239	229843538	ENSG00000153827.13	-	protein_coding	KNOWN	TRIP12	17	42	-0.214170
chr2	229894346	229894453	229894399	ENSG00000222344.1	+	snRNA	KNOWN	RNU6-613P	1	1	-0.079863
chr2	229922302	230013109	229967705	ENSG00000153832.11	+	protein_coding	KNOWN	FBXO36	4	5	0.029182
chr2	229937814	229937882	229937848	ENSG00000252333.1	-	snRNA	KNOWN	RNU6-964P	1	1	0.307720
chr2	229942728	229945137	229943932	ENSG00000231534.1	+	sense_intronic	KNOWN	FBXO36-IT1	1	2	0.307720
chr2	229973315	229973421	229973368	ENSG00000206725.1	+	snRNA	KNOWN	RNU6-1027P	1	1	-0.065888
chr2	229993870	229993921	229993895	ENSG00000278076.1	-	miRNA	NOVEL	AC009973.1	1	1	-0.071144
chr2	230034974	230068999	230051986	ENSG00000163053.10	-	protein_coding	KNOWN	SLC16A14	5	5	-0.002415
chr2	230058229	230058324	230058276	ENSG00000199400.1	-	misc_RNA	KNOWN	RNY4P19	1	1	0.132406
chr2	230121370	230174223	230147796	ENSG00000225963.7	+	antisense	KNOWN	AC009950.2	11	5	-0.107578
chr2	230167293	230225729	230196511	ENSG00000135899.16	-	protein_coding	KNOWN	SP110	15	19	-0.041337
chr2	230176665	230221721	230199193	ENSG00000280755.1	-	protein_coding	KNOWN	AC009950.1	1	15	-0.070347
chr2	230203110	230313215	230258162	ENSG00000079263.18	+	protein_coding	KNOWN	SP140	14	27	-0.297912
chr2	230327184	230403732	230365458	ENSG00000185404.16	+	protein_coding	KNOWN	SP140L	10	19	-0.034338
chr2	230410700	230412529	230411614	ENSG00000279964.1	-	TEC	KNOWN	RP11-69J7.1	1	1	0.190482
chr2	230415942	230544090	230480016	ENSG00000067066.16	+	protein_coding	KNOWN	SP100	19	29	-0.083353
chr2	230507101	230507386	230507243	ENSG00000243650.3	+	misc_RNA	KNOWN	RN7SL834P	1	1	0.134805
chr2	230515023	230515638	230515330	ENSG00000250011.1	+	processed_pseudogene	KNOWN	HMGB1P3	1	1	-0.336245
chr2	230520594	230580006	230550300	ENSG00000235419.5	-	antisense	KNOWN	AC010149.4	2	7	-0.248403
chr2	230573167	230573809	230573488	ENSG00000183022.5	-	processed_pseudogene	KNOWN	TPM3P8	1	1	-0.601347
chr2	230587121	230587227	230587174	ENSG00000199791.1	+	snRNA	KNOWN	RNU6-451P	1	1	-0.601347
chr2	230690921	230700529	230695725	ENSG00000226125.1	-	lincRNA	KNOWN	AC098823.3	1	4	0.191039
chr2	230712845	230821075	230766960	ENSG00000135932.10	+	protein_coding	KNOWN	CAB39	7	9	0.061133
chr2	230725143	230725403	230725273	ENSG00000237758.1	-	processed_pseudogene	KNOWN	BANF1P3	1	1	0.115971
chr2	230752141	230752247	230752194	ENSG00000201044.1	+	snRNA	KNOWN	RNU6-268P	1	1	0.033098
chr2	230836909	230837385	230837147	ENSG00000270891.1	+	processed_pseudogene	KNOWN	RP11-499P1.1	1	1	0.035724
chr2	230864639	230879248	230871943	ENSG00000135916.15	+	protein_coding	KNOWN	ITM2C	10	6	0.206186
chr2	230886500	230897091	230891795	ENSG00000232520.1	+	antisense	KNOWN	AC012507.3	4	3	0.355261
chr2	230907318	230961066	230934192	ENSG00000135898.9	-	protein_coding	KNOWN	GPR55	5	3	0.333301
chr2	230908852	230910102	230909477	ENSG00000230385.1	+	antisense	KNOWN	AC012507.4	1	2	0.379059
chr2	230957593	230957950	230957771	ENSG00000235013.1	+	processed_pseudogene	KNOWN	COX20P2	1	1	0.310887
chr2	230984368	230996032	230990200	ENSG00000238062.5	-	lincRNA	KNOWN	SPATA3-AS1	7	6	-0.031586
chr2	230996121	231025055	231010588	ENSG00000173699.15	+	protein_coding	KNOWN	SPATA3	10	9	0.309933
chr2	231037490	231049719	231043604	ENSG00000204128.5	+	protein_coding	KNOWN	C2orf72	3	3	0.272027
chr2	231052040	231052637	231052338	ENSG00000261829.1	+	sense_overlapping	KNOWN	RP11-223I10.1	1	1	0.371609
chr2	231056864	231172827	231114845	ENSG00000173692.12	+	protein_coding	KNOWN	PSMD1	13	25	0.158023
chr2	231108230	231125118	231116674	ENSG00000135914.5	-	protein_coding	KNOWN	HTR2B	1	4	-0.047963
chr2	231133462	231133630	231133546	ENSG00000201574.1	+	snRNA	KNOWN	RNU1-93P	1	1	-0.106692
chr2	231198546	231374837	231286691	ENSG00000135931.17	+	protein_coding	KNOWN	ARMC9	15	25	0.362189
chr2	231256097	231256306	231256201	ENSG00000237039.1	+	processed_pseudogene	KNOWN	AC018738.2	1	1	0.442489
chr2	231362708	231362793	231362750	ENSG00000263641.1	+	miRNA	KNOWN	MIR4777	1	1	0.299985
chr2	231388976	231394991	231391983	ENSG00000224376.1	+	processed_transcript	KNOWN	AC017104.6	3	3	0.747195
chr2	231395543	231401164	231398353	ENSG00000156966.6	+	protein_coding	KNOWN	B3GNT7	2	2	0.749305
chr2	231433923	231434426	231434174	ENSG00000172799.5	-	processed_pseudogene	KNOWN	ZBTB8OSP2	1	1	0.483872
chr2	231437101	231437421	231437261	ENSG00000230047.1	-	processed_pseudogene	KNOWN	AC017104.4	1	1	0.483872
chr2	231452195	231453153	231452674	ENSG00000233538.1	+	lincRNA	KNOWN	AC017104.2	1	3	0.385284
chr2	231453531	231483641	231468586	ENSG00000115053.15	-	protein_coding	KNOWN	NCL	10	14	0.388124
chr2	231455800	231455936	231455868	ENSG00000206885.1	-	snoRNA	KNOWN	SNORA75	1	1	0.385284
chr2	231456417	231456557	231456487	ENSG00000281035.1	-	miRNA	NOVEL	AC017104.3	1	1	0.385284
chr2	231456444	231456523	231456483	ENSG00000207280.1	-	snoRNA	KNOWN	SNORD20	1	1	0.385284
chr2	231460371	231460440	231460405	ENSG00000202400.1	-	snoRNA	KNOWN	SNORD82	1	1	0.385284
chr2	231490204	231490289	231490246	ENSG00000263774.1	-	miRNA	NOVEL	AC017104.1	1	1	0.621883
chr2	231501990	231502201	231502095	ENSG00000223198.1	-	snRNA	KNOWN	RNU2-22P	1	1	0.621883
chr2	231508426	231514339	231511382	ENSG00000181798.2	-	lincRNA	KNOWN	LINC00471	1	3	0.403600
chr2	231523160	231530495	231526827	ENSG00000171596.6	-	protein_coding	KNOWN	NMUR1	1	3	0.335576
chr2	231559903	231560364	231560133	ENSG00000231494.1	+	processed_pseudogene	KNOWN	AC104634.3	1	1	0.366167
chr2	231585864	231586327	231586095	ENSG00000228884.2	+	processed_pseudogene	KNOWN	RPL23AP26	1	1	0.459109
chr2	231592901	231594283	231593592	ENSG00000177673.3	+	protein_coding	KNOWN	C2orf57	1	1	0.485906
chr2	231645998	231646273	231646135	ENSG00000239202.3	-	misc_RNA	KNOWN	RN7SL499P	1	1	0.542653
chr2	231706895	231713541	231710218	ENSG00000187514.14	+	protein_coding	KNOWN	PTMA	13	7	0.834315
chr2	231711525	231711647	231711586	ENSG00000277986.1	+	snRNA	NOVEL	U4	1	1	0.888458
chr2	231732425	231786272	231759348	ENSG00000156973.13	-	protein_coding	KNOWN	PDE6D	5	5	0.184796
chr2	231757887	231757950	231757918	ENSG00000253084.2	+	snRNA	KNOWN	RNU6-840P	1	1	0.039841
chr2	231768604	231768680	231768642	ENSG00000281072.1	+	pseudogene	NOVEL	AC073476.1	1	2	0.039841
chr2	231781671	231809254	231795462	ENSG00000144524.17	+	protein_coding	KNOWN	COPS7B	25	8	0.263420
chr2	231789481	231789887	231789684	ENSG00000237641.1	-	processed_pseudogene	KNOWN	RP11-690I21.1	1	1	0.230439
chr2	231809846	231812352	231811099	ENSG00000261096.1	+	sense_overlapping	KNOWN	RP11-690I21.2	1	1	0.124224
chr2	231810348	231810844	231810596	ENSG00000260622.1	-	processed_pseudogene	KNOWN	RP11-690I21.3	1	1	0.114245
chr2	231892242	231892298	231892270	ENSG00000222246.1	-	miRNA	KNOWN	MIR1471	1	1	0.124596
chr2	231921820	231926403	231924111	ENSG00000163273.3	-	protein_coding	KNOWN	NPPC	2	3	0.172365
chr2	231961245	232344350	232152797	ENSG00000144535.19	+	protein_coding	KNOWN	DIS3L2	16	24	0.136279
chr2	231978488	232015720	231997104	ENSG00000227033.1	-	antisense	KNOWN	AC105461.1	1	2	0.003204
chr2	232172653	232172747	232172700	ENSG00000207626.1	+	miRNA	KNOWN	MIR562	1	1	-0.172655
chr2	232343116	232343903	232343509	ENSG00000251485.1	+	processed_pseudogene	KNOWN	AC068134.10	1	1	0.848566
chr2	232349754	232351309	232350531	ENSG00000230122.1	-	unprocessed_pseudogene	KNOWN	ECEL1P3	1	3	0.236255
chr2	232368576	232368697	232368636	ENSG00000275157.1	+	unprocessed_pseudogene	KNOWN	RP11-762N20.1	1	1	0.121739
chr2	232378534	232382889	232380711	ENSG00000163283.6	+	protein_coding	KNOWN	ALPP	3	11	0.695434
chr2	232379635	232381674	232380654	ENSG00000224516.5	-	antisense	KNOWN	AC068134.8	2	3	0.695434
chr2	232385750	232387457	232386603	ENSG00000244280.1	-	transcribed_unprocessed_pseudogene	KNOWN	ECEL1P2	2	1	0.695434
chr2	232406843	232410714	232408778	ENSG00000163286.7	+	protein_coding	KNOWN	ALPPL2	2	13	0.395132
chr2	232415818	232419816	232417817	ENSG00000204121.2	-	unprocessed_pseudogene	KNOWN	ECEL1P1	1	9	0.572158
chr2	232420661	232421461	232421061	ENSG00000237087.1	-	lincRNA	KNOWN	AC068134.6	1	2	0.572158
chr2	232442034	232447418	232444726	ENSG00000223788.4	+	unprocessed_pseudogene	KNOWN	DIS3L2P1	1	5	0.237109
chr2	232456123	232460032	232458077	ENSG00000163295.4	+	protein_coding	KNOWN	ALPI	2	11	0.754491
chr2	232479827	232487828	232483827	ENSG00000171551.11	-	protein_coding	KNOWN	ECEL1	4	18	0.106865
chr2	232520463	232525716	232523089	ENSG00000237412.6	+	protein_coding	KNOWN	PRSS56	3	13	0.418802
chr2	232525993	232536667	232531330	ENSG00000135902.9	+	protein_coding	KNOWN	CHRND	6	12	0.747369
chr2	232539727	232546403	232543065	ENSG00000196811.11	+	protein_coding	KNOWN	CHRNG	3	12	0.944766
chr2	232547968	232550592	232549280	ENSG00000221944.4	-	protein_coding	KNOWN	TIGD1	1	1	0.767293
chr2	232550052	232583644	232566848	ENSG00000135930.13	+	protein_coding	KNOWN	EIF4E2	14	8	0.243699
chr2	232550474	232550573	232550523	ENSG00000266620.1	-	miRNA	KNOWN	MIR5001	1	1	0.159455
chr2	232580948	232611971	232596459	ENSG00000237126.8	-	antisense	KNOWN	AC073254.1	13	6	0.187063
chr2	232606057	232682781	232644419	ENSG00000115468.11	+	protein_coding	KNOWN	EFHD1	7	5	0.268953
chr2	232649849	232650136	232649992	ENSG00000244384.3	+	misc_RNA	KNOWN	RN7SL359P	1	1	0.367562
chr2	232697299	232860575	232778937	ENSG00000204120.14	+	protein_coding	KNOWN	GIGYF2	46	31	0.004129
chr2	232729523	232730198	232729860	ENSG00000213055.3	-	processed_pseudogene	KNOWN	EEF1B2P7	1	1	0.236470
chr2	232760146	232767949	232764047	ENSG00000241409.1	-	3prime_overlapping_ncrna	KNOWN	AC064852.4	1	3	0.065840
chr2	232766464	232776568	232771516	ENSG00000115474.6	-	protein_coding	KNOWN	KCNJ13	5	3	-0.229856
chr2	232782665	232782766	232782715	ENSG00000252452.1	+	snRNA	KNOWN	RNU6-107P	1	1	-0.388980
chr2	232828653	232828751	232828702	ENSG00000199781.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.172655
chr2	232857270	232878708	232867989	ENSG00000182600.9	+	protein_coding	KNOWN	C2orf82	8	4	0.243875
chr2	232878686	233013272	232945979	ENSG00000066248.14	-	protein_coding	KNOWN	NGEF	9	15	0.257721
chr2	233012614	233015885	233014249	ENSG00000222001.2	+	processed_transcript	KNOWN	AC106876.2	2	3	0.297461
chr2	233032672	233035057	233033864	ENSG00000115488.3	+	protein_coding	KNOWN	NEU2	1	2	0.334969
chr2	233059967	233207903	233133935	ENSG00000168918.13	+	protein_coding	KNOWN	INPP5D	14	27	0.173943
chr2	233205199	233205479	233205339	ENSG00000263941.2	+	misc_RNA	KNOWN	RN7SL32P	1	1	0.284637
chr2	233210051	233295674	233252862	ENSG00000085978.21	+	protein_coding	KNOWN	ATG16L1	18	19	0.275365
chr2	233275727	233276002	233275864	ENSG00000252010.1	+	scaRNA	KNOWN	SCARNA5	1	1	0.185566
chr2	233288676	233288940	233288808	ENSG00000251791.1	+	scaRNA	KNOWN	SCARNA6	1	1	0.185566
chr2	233307816	233347055	233327435	ENSG00000130561.16	+	protein_coding	KNOWN	SAG	16	16	0.287370
chr2	233351132	233353416	233352274	ENSG00000259793.1	-	antisense	KNOWN	RP11-400N9.1	1	1	0.394315
chr2	233354507	233472104	233413305	ENSG00000077044.9	+	protein_coding	KNOWN	DGKD	15	31	0.369601
chr2	233379843	233379955	233379899	ENSG00000201013.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.013518
chr2	233475520	233566782	233521151	ENSG00000085982.13	-	protein_coding	KNOWN	USP40	17	32	-0.154098
chr2	233545482	233547032	233546257	ENSG00000271639.1	+	processed_pseudogene	KNOWN	RP11-289A15.1	1	1	-0.269408
chr2	233585439	233586291	233585865	ENSG00000228949.1	+	unprocessed_pseudogene	KNOWN	UGT1A12P	1	1	-0.239459
chr2	233603553	233604401	233603977	ENSG00000227846.1	+	unprocessed_pseudogene	KNOWN	UGT1A11P	1	1	-0.578160
chr2	233617645	233773310	233695477	ENSG00000242366.3	+	protein_coding	KNOWN	UGT1A8	1	5	-0.319353
chr2	233636454	233773305	233704879	ENSG00000242515.5	+	protein_coding	KNOWN	UGT1A10	2	5	-0.297695
chr2	233647926	233649026	233648476	ENSG00000234143.1	+	unprocessed_pseudogene	KNOWN	UGT1A13P	1	2	-0.766454
chr2	233671853	233773300	233722576	ENSG00000241119.1	+	protein_coding	KNOWN	UGT1A9	1	5	-0.239144
chr2	233681938	233773299	233727618	ENSG00000244122.2	+	protein_coding	KNOWN	UGT1A7	2	5	-0.251304
chr2	233691607	233773300	233732453	ENSG00000167165.18	+	protein_coding	KNOWN	UGT1A6	8	7	-0.259144
chr2	233693434	233708699	233701066	ENSG00000224814.1	-	antisense	KNOWN	AC114812.8	1	2	-0.466218
chr2	233712992	233773299	233743145	ENSG00000240224.1	+	protein_coding	KNOWN	UGT1A5	1	5	-0.201561
chr2	233718778	233773299	233746038	ENSG00000244474.5	+	protein_coding	KNOWN	UGT1A4	2	6	-0.207356
chr2	233721522	233722065	233721793	ENSG00000233445.1	-	processed_pseudogene	KNOWN	RPL17P11	1	1	-0.146947
chr2	233729108	233773299	233751203	ENSG00000243135.6	+	protein_coding	KNOWN	UGT1A3	1	5	-0.221478
chr2	233738952	233741957	233740454	ENSG00000248114.1	+	unprocessed_pseudogene	KNOWN	AC114812.9	1	3	-0.293298
chr2	233742750	233744015	233743382	ENSG00000227802.1	-	transcribed_processed_pseudogene	KNOWN	DNAJB3	2	1	-0.293298
chr2	233747214	233748079	233747646	ENSG00000228445.1	+	unprocessed_pseudogene	KNOWN	UGT1A2P	1	1	-0.293298
chr2	233750617	233753656	233752136	ENSG00000248705.1	+	unprocessed_pseudogene	KNOWN	AC114812.10	1	3	-0.145587
chr2	233754305	233755345	233754825	ENSG00000178836.6	-	transcribed_processed_pseudogene	KNOWN	AC114812.5	4	2	-0.145587
chr2	233760248	233773299	233766773	ENSG00000241635.7	+	protein_coding	KNOWN	UGT1A1	2	5	-0.176102
chr2	233775679	233833423	233804551	ENSG00000185038.14	+	protein_coding	KNOWN	MROH2A	8	42	-0.266344
chr2	233833416	233854566	233843991	ENSG00000123485.11	-	protein_coding	KNOWN	HJURP	9	9	0.285212
chr2	233865437	233868444	233866940	ENSG00000224287.2	-	transcribed_processed_pseudogene	KNOWN	MSL3P1	2	2	0.218822
chr2	233865496	233867359	233866427	ENSG00000279809.1	-	TEC	KNOWN	AC005538.3	1	1	0.218822
chr2	233917398	234019522	233968460	ENSG00000144481.16	+	protein_coding	KNOWN	TRPM8	14	26	-0.143513
chr2	233946146	233955435	233950790	ENSG00000237581.1	-	antisense	KNOWN	AC005538.5	1	2	-0.064644
chr2	234012157	234012265	234012211	ENSG00000274951.1	-	miRNA	NOVEL	AC005538.1	1	1	-0.361374
chr2	234050679	234077134	234063906	ENSG00000072080.10	+	protein_coding	KNOWN	SPP2	4	8	-0.521937
chr2	234082259	234084490	234083374	ENSG00000279218.1	+	TEC	KNOWN	RP11-263G22.1	1	1	-0.568738
chr2	234109081	234109481	234109281	ENSG00000226442.2	+	lincRNA	KNOWN	AC006037.2	1	2	-0.117727
chr2	234222838	234224514	234223676	ENSG00000261298.1	+	lincRNA	KNOWN	RP11-309M7.1	2	1	-0.347051
chr2	234329483	234329838	234329660	ENSG00000237784.1	+	processed_pseudogene	KNOWN	AC097713.5	1	1	-0.050302
chr2	234438328	234462127	234450227	ENSG00000228162.1	+	lincRNA	KNOWN	AC097713.3	1	3	0.413552
chr2	234444590	234454595	234449592	ENSG00000231682.1	-	lincRNA	KNOWN	AC097713.4	1	3	0.410009
chr2	234455157	234455783	234455470	ENSG00000232690.1	-	unprocessed_pseudogene	KNOWN	HSPE1P9	1	2	0.448136
chr2	234493041	234497053	234495047	ENSG00000188042.7	-	protein_coding	KNOWN	ARL4C	2	2	-0.096081
chr2	234682668	234717764	234700216	ENSG00000280744.1	+	lincRNA	KNOWN	LINC01173	1	3	0.055713
chr2	234743542	234745606	234744574	ENSG00000278593.1	-	unprocessed_pseudogene	KNOWN	RP13-977E11.1	1	2	0.147640
chr2	234834315	234913384	234873849	ENSG00000235726.5	-	processed_transcript	KNOWN	AC010148.1	4	4	0.100356
chr2	234951973	235055714	235003843	ENSG00000130147.15	+	protein_coding	KNOWN	SH3BP4	11	6	0.398142
chr2	235084822	235088586	235086704	ENSG00000226542.1	-	lincRNA	KNOWN	AC114814.4	1	3	-0.177706
chr2	235147016	235147500	235147258	ENSG00000231032.1	-	processed_pseudogene	KNOWN	AC114814.2	1	1	-0.375787
chr2	235177896	235178905	235178400	ENSG00000235293.1	+	lincRNA	KNOWN	AC114814.3	1	2	0.358778
chr2	235494089	236131800	235812944	ENSG00000157985.18	+	protein_coding	KNOWN	AGAP1	14	18	0.026437
chr2	235505751	235507566	235506658	ENSG00000235529.1	+	sense_intronic	KNOWN	AGAP1-IT1	1	2	0.068659
chr2	235773855	235783387	235778621	ENSG00000222007.6	-	antisense	KNOWN	AC064874.1	2	3	0.237533
chr2	235882362	235882493	235882427	ENSG00000228499.1	-	processed_pseudogene	KNOWN	TMSB10P1	1	1	0.002262
chr2	236037250	236037311	236037280	ENSG00000238812.1	+	snRNA	KNOWN	RNU7-127P	1	1	-0.287942
chr2	236072295	236072556	236072425	ENSG00000264676.2	+	misc_RNA	KNOWN	RN7SL204P	1	1	-0.070065
chr2	236153071	236153172	236153121	ENSG00000207049.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.193165
chr2	236165236	236168369	236166802	ENSG00000168505.6	-	protein_coding	KNOWN	GBX2	3	3	-0.193165
chr2	236167447	236294927	236231187	ENSG00000233611.3	+	antisense	KNOWN	AC079135.1	2	4	-0.059354
chr2	236194872	236264409	236229640	ENSG00000182177.13	-	protein_coding	KNOWN	ASB18	5	6	-0.007787
chr2	236210373	236210548	236210460	ENSG00000200745.1	-	snRNA	KNOWN	RNU1-31P	1	1	-0.007544
chr2	236324147	236507542	236415844	ENSG00000132321.16	-	protein_coding	KNOWN	IQCA1	10	20	-0.354094
chr2	236367560	236369102	236368331	ENSG00000270540.1	+	antisense	KNOWN	RP11-785G17.1	1	1	-0.146356
chr2	236391074	236392388	236391731	ENSG00000232893.1	+	antisense	KNOWN	IQCA1-AS1	1	2	-0.202456
chr2	236407846	236409077	236408461	ENSG00000231546.1	-	transcribed_processed_pseudogene	KNOWN	RPL3P5	1	1	-0.202456
chr2	236567787	236582358	236575072	ENSG00000144476.5	+	protein_coding	KNOWN	ACKR3	2	2	0.061475
chr2	236733382	236754363	236743872	ENSG00000232328.1	+	lincRNA	KNOWN	AC011286.1	2	3	0.172108
chr2	237015204	237015305	237015254	ENSG00000202341.1	-	snRNA	KNOWN	RNU6-1051P	1	1	-0.244700
chr2	237048599	237056167	237052383	ENSG00000124835.2	-	antisense	KNOWN	AC105760.3	1	7	-0.213525
chr2	237059434	237085817	237072625	ENSG00000227252.1	-	antisense	KNOWN	AC105760.2	1	2	-0.083117
chr2	237085312	237100466	237092889	ENSG00000198612.10	+	protein_coding	KNOWN	COPS8	7	9	0.056459
chr2	237122910	237124097	237123503	ENSG00000224844.1	-	lincRNA	KNOWN	AC107079.1	1	2	-0.535282
chr2	237257091	237257676	237257383	ENSG00000224132.2	+	lincRNA	KNOWN	AC112715.2	1	2	0.324826
chr2	237324003	237414375	237369189	ENSG00000163359.15	-	protein_coding	KNOWN	COL6A3	14	44	0.532103
chr2	237421420	237425276	237423348	ENSG00000222022.1	-	lincRNA	KNOWN	AC112721.1	1	3	0.341970
chr2	237428920	237434822	237431871	ENSG00000222032.1	-	lincRNA	KNOWN	AC112721.2	1	3	0.368465
chr2	237485428	237555318	237520373	ENSG00000115648.13	+	protein_coding	KNOWN	MLPH	23	16	0.458713
chr2	237510931	237510988	237510959	ENSG00000277842.1	+	miRNA	KNOWN	MIR6811	1	1	0.597770
chr2	237563165	237563270	237563217	ENSG00000222449.1	+	snRNA	KNOWN	RNU6-1140P	1	1	0.503125
chr2	237566574	237567175	237566874	ENSG00000071677.1	+	protein_coding	KNOWN	PRLH	1	2	0.503125
chr2	237574322	237601614	237587968	ENSG00000124839.12	-	protein_coding	KNOWN	RAB17	11	6	0.558180
chr2	237591020	237595981	237593500	ENSG00000234949.2	+	antisense	KNOWN	AC104667.3	2	3	0.453666
chr2	237612977	237626525	237619751	ENSG00000227107.1	+	lincRNA	KNOWN	AC096574.5	1	2	0.438795
chr2	237627576	237813682	237720629	ENSG00000124831.18	+	protein_coding	KNOWN	LRRFIP1	15	24	0.367186
chr2	237798389	237842808	237820598	ENSG00000177483.11	+	protein_coding	KNOWN	RBM44	6	16	-0.005912
chr2	237858893	237912114	237885503	ENSG00000132329.10	+	protein_coding	KNOWN	RAMP1	4	4	0.476418
chr2	237869904	237869982	237869943	ENSG00000263723.1	+	snoRNA	NOVEL	SNORD39	1	1	-0.004224
chr2	237966827	238042782	238004804	ENSG00000184182.18	+	protein_coding	KNOWN	UBE2F	23	12	0.316525
chr2	237967014	238099412	238033213	ENSG00000258984.5	+	protein_coding	KNOWN	UBE2F-SCLY	2	19	0.279091
chr2	238028971	238029063	238029017	ENSG00000251971.1	-	snRNA	KNOWN	RNU6-1333P	1	1	0.098978
chr2	238060889	238099413	238080151	ENSG00000132330.16	+	protein_coding	KNOWN	SCLY	20	12	0.196512
chr2	238100157	238133287	238116722	ENSG00000144488.14	+	protein_coding	KNOWN	ESPNL	6	9	0.796672
chr2	238138722	238152947	238145834	ENSG00000168427.8	+	protein_coding	KNOWN	KLHL30	1	8	0.865628
chr2	238152889	238155994	238154441	ENSG00000279484.1	-	TEC	KNOWN	KLHL30-AS1	1	1	0.868866
chr2	238158982	238168900	238163941	ENSG00000178752.15	+	protein_coding	KNOWN	FAM132B	7	8	0.868866
chr2	238170401	238203729	238187065	ENSG00000132323.8	-	protein_coding	KNOWN	ILKAP	12	12	0.558598
chr2	238224552	238231677	238228114	ENSG00000186235.10	-	processed_transcript	KNOWN	AC016757.3	6	4	0.177682
chr2	238231684	238255633	238243658	ENSG00000225057.2	+	processed_transcript	KNOWN	AC096574.4	2	7	0.449111
chr2	238238267	238240662	238239464	ENSG00000144485.10	-	protein_coding	KNOWN	HES6	9	4	0.480689
chr2	238244038	238290102	238267070	ENSG00000132326.11	-	protein_coding	KNOWN	PER2	4	23	0.511789
chr2	238298710	238300620	238299665	ENSG00000232306.1	-	antisense	KNOWN	AC012485.2	1	3	0.710718
chr2	238320441	238400900	238360670	ENSG00000204104.11	+	protein_coding	KNOWN	TRAF3IP1	5	17	0.271553
chr2	238412642	238412745	238412693	ENSG00000202099.1	+	snRNA	KNOWN	RNU6-234P	1	1	0.605731
chr2	238426742	238452250	238439496	ENSG00000065802.11	+	protein_coding	KNOWN	ASB1	9	5	0.323589
chr2	238427077	238427729	238427403	ENSG00000229915.1	-	antisense	KNOWN	AC016999.2	1	2	0.605731
chr2	238454908	238457520	238456214	ENSG00000274346.1	+	unprocessed_pseudogene	KNOWN	RP11-40B20.1	1	2	0.536931
chr2	238510690	238555054	238532872	ENSG00000225493.1	-	lincRNA	KNOWN	LINC01107	1	3	0.432764
chr2	238720324	238740780	238730552	ENSG00000234279.1	+	lincRNA	KNOWN	AC113618.1	1	2	0.242341
chr2	238735263	238735547	238735405	ENSG00000224252.1	-	processed_pseudogene	KNOWN	AC113618.2	1	1	0.235662
chr2	238788648	238789716	238789182	ENSG00000226992.1	-	lincRNA	KNOWN	AC144525.1	1	2	0.646432
chr2	238848032	238910543	238879287	ENSG00000233608.3	+	protein_coding	KNOWN	TWIST2	2	2	0.594173
chr2	238919302	238926269	238922785	ENSG00000227744.4	-	lincRNA	KNOWN	FLJ43879	1	10	0.442489
chr2	238972928	238973010	238972969	ENSG00000211566.2	-	miRNA	NOVEL	AC114788.1	1	1	0.205202
chr2	239048168	239401654	239224911	ENSG00000068024.16	-	protein_coding	KNOWN	HDAC4	17	27	0.375882
chr2	239068817	239068914	239068865	ENSG00000266109.1	-	miRNA	KNOWN	MIR4440	1	1	0.341770
chr2	239068919	239069012	239068965	ENSG00000280528.1	-	miRNA	NOVEL	AC017028.11	1	1	0.341770
chr2	239068968	239069061	239069014	ENSG00000265332.1	-	miRNA	NOVEL	AC017028.5	1	1	0.341770
chr2	239069066	239069159	239069112	ENSG00000266360.1	-	miRNA	NOVEL	AC017028.9	1	1	0.341770
chr2	239069164	239069257	239069210	ENSG00000263743.1	-	miRNA	NOVEL	AC017028.1	1	1	0.341770
chr2	239069360	239069453	239069406	ENSG00000264103.1	-	miRNA	NOVEL	AC017028.2	1	1	0.341770
chr2	239069458	239069551	239069504	ENSG00000264518.1	-	miRNA	NOVEL	AC017028.3	1	1	0.341770
chr2	239069605	239069698	239069651	ENSG00000265979.1	-	miRNA	NOVEL	AC017028.8	1	1	0.341770
chr2	239069752	239069845	239069798	ENSG00000264730.1	-	miRNA	NOVEL	AC017028.4	1	1	0.341770
chr2	239085698	239085796	239085747	ENSG00000265891.1	-	miRNA	NOVEL	AC017028.7	1	1	0.653871
chr2	239085827	239085926	239085876	ENSG00000264810.1	-	miRNA	KNOWN	MIR4441	1	1	0.653871
chr2	239086343	239086442	239086392	ENSG00000265416.1	-	miRNA	NOVEL	AC017028.6	1	1	0.653871
chr2	239091759	239091836	239091797	ENSG00000281838.1	-	miRNA	NOVEL	AC017028.12	1	1	0.445629
chr2	239161797	239162357	239162077	ENSG00000280260.1	-	protein_coding	KNOWN	AC017028.10	1	2	0.459925
chr2	239305462	239305545	239305503	ENSG00000265215.1	+	miRNA	KNOWN	MIR4269	1	1	0.321918
chr2	239351724	239351804	239351764	ENSG00000264292.1	-	miRNA	KNOWN	MIR2467	1	1	0.470503
chr2	239401436	239402364	239401900	ENSG00000222020.2	+	antisense	KNOWN	AC062017.1	3	2	0.241135
chr2	239578301	239586094	239582197	ENSG00000196758.3	+	lincRNA	KNOWN	AC079612.1	1	2	-0.004224
chr2	239625698	239630839	239628268	ENSG00000227459.1	+	lincRNA	KNOWN	AC079612.2	1	2	-0.095183
chr2	239734956	239735538	239735247	ENSG00000259889.1	+	lincRNA	KNOWN	RP11-315F22.1	1	1	0.418802
chr2	239762860	239802883	239782871	ENSG00000220256.3	+	lincRNA	KNOWN	AC093802.1	1	3	0.087655
chr2	239892450	240025402	239958926	ENSG00000130414.11	-	protein_coding	KNOWN	NDUFA10	14	11	0.100245
chr2	239943015	239943094	239943054	ENSG00000264279.1	-	miRNA	KNOWN	MIR4786	1	1	0.249232
chr2	240028965	240030456	240029710	ENSG00000182083.7	-	protein_coding	KNOWN	OR6B2	1	1	-0.030342
chr2	240041813	240042982	240042397	ENSG00000221961.3	-	protein_coding	KNOWN	PRR21	1	1	-0.272772
chr2	240045077	240046072	240045574	ENSG00000178586.4	-	protein_coding	KNOWN	OR6B3	1	1	-0.272772
chr2	240079433	240080362	240079897	ENSG00000231278.1	+	unprocessed_pseudogene	KNOWN	OR9S24P	1	2	-0.253783
chr2	240109102	240110052	240109577	ENSG00000213048.3	+	unitary_pseudogene	KNOWN	OR5S1P	1	1	-0.446674
chr2	240126563	240136807	240131685	ENSG00000172428.10	-	protein_coding	KNOWN	MYEOV2	5	5	0.312806
chr2	240139026	240144562	240141794	ENSG00000178602.7	-	protein_coding	KNOWN	OTOS	2	5	0.334647
chr2	240227560	240256035	240241797	ENSG00000227479.1	-	lincRNA	KNOWN	AC124861.1	1	3	0.575867
chr2	240261715	240261860	240261787	ENSG00000221412.1	-	miRNA	NOVEL	AC124861.2	1	1	0.735506
chr2	240289216	240289443	240289329	ENSG00000276366.1	+	snoRNA	NOVEL	U3	1	1	0.214388
chr2	240435671	240468078	240451874	ENSG00000063660.8	+	protein_coding	KNOWN	GPC1	9	9	1.095238
chr2	240449315	240456714	240453014	ENSG00000218416.4	-	processed_transcript	KNOWN	PP14571	4	3	1.205122
chr2	240456001	240456089	240456045	ENSG00000207611.1	+	miRNA	KNOWN	MIR149	1	1	1.234172
chr2	240479422	240569209	240524315	ENSG00000144504.15	-	protein_coding	KNOWN	ANKMY1	24	18	0.536416
chr2	240560054	240564014	240562034	ENSG00000188542.9	+	protein_coding	KNOWN	DUSP28	5	3	0.495155
chr2	240565804	240581372	240573588	ENSG00000142327.11	+	protein_coding	KNOWN	RNPEPL1	10	11	0.885991
chr2	240582700	240586699	240584699	ENSG00000260942.1	-	antisense	KNOWN	CAPN10-AS1	1	1	1.030153
chr2	240586716	240617705	240602210	ENSG00000142330.19	+	protein_coding	KNOWN	CAPN10	16	13	0.881158
chr2	240605431	240631259	240618345	ENSG00000178623.11	+	protein_coding	KNOWN	GPR35	5	6	0.501522
chr2	240672530	240672812	240672671	ENSG00000276949.1	+	processed_pseudogene	KNOWN	RP11-118M12.1	1	1	0.284637
chr2	240676418	240682906	240679662	ENSG00000185176.12	-	protein_coding	KNOWN	AQP12B	6	5	0.284637
chr2	240686334	240690414	240688374	ENSG00000219159.4	+	lincRNA	KNOWN	AC011298.2	1	3	0.323012
chr2	240691845	240698483	240695164	ENSG00000184945.13	+	protein_coding	KNOWN	AQP12A	5	4	0.661915
chr2	240701204	240701685	240701444	ENSG00000274977.1	-	processed_pseudogene	KNOWN	RP11-118M12.2	1	1	0.661915
chr2	240713764	240820308	240767036	ENSG00000130294.14	-	protein_coding	KNOWN	KIF1A	13	49	0.829634
chr2	240868479	240880502	240874490	ENSG00000172482.4	+	protein_coding	KNOWN	AGXT	4	11	0.830426
chr2	240886048	240896889	240891468	ENSG00000172478.17	-	protein_coding	KNOWN	C2orf54	5	5	0.769619
chr2	240906330	240993311	240949820	ENSG00000226321.5	+	protein_coding	KNOWN	CROCC2	3	32	0.874473
chr2	240954617	240967451	240961034	ENSG00000233392.5	-	processed_transcript	KNOWN	AC104809.4	3	9	0.718177
chr2	240981515	240986072	240983793	ENSG00000223991.1	-	antisense	KNOWN	AC104809.2	1	2	0.758353
chr2	240998838	241095568	241047203	ENSG00000162804.13	+	protein_coding	KNOWN	SNED1	12	32	0.662562
chr2	241010045	241010744	241010394	ENSG00000229996.1	-	antisense	KNOWN	AC093585.6	1	2	0.701758
chr2	241015599	241064116	241039857	ENSG00000225521.1	-	antisense	KNOWN	AC005237.4	1	3	0.553465
chr2	241072169	241102332	241087250	ENSG00000122085.16	-	protein_coding	KNOWN	MTERF4	22	7	0.681022
chr2	241106099	241150264	241128181	ENSG00000115687.13	-	protein_coding	KNOWN	PASK	16	19	0.731659
chr2	241118725	241118943	241118834	ENSG00000235861.1	+	processed_pseudogene	KNOWN	AC005237.2	1	1	0.912244
chr2	241149576	241183652	241166614	ENSG00000115685.14	+	protein_coding	KNOWN	PPP1R7	20	11	0.628529
chr2	241188509	241225377	241206943	ENSG00000146205.13	+	protein_coding	KNOWN	ANO7	9	25	0.848028
chr2	241227264	241317061	241272162	ENSG00000115677.16	-	protein_coding	KNOWN	HDLBP	47	28	0.818328
chr2	241245202	241245299	241245250	ENSG00000266621.1	-	miRNA	NOVEL	AC104841.1	1	1	0.983793
chr2	241284869	241284946	241284907	ENSG00000281551.1	+	snoRNA	NOVEL	snoMe28S-Am2634	1	1	0.813691
chr2	241315100	241354027	241334563	ENSG00000168385.17	+	protein_coding	KNOWN	SEPT2	45	17	0.609469
chr2	241351340	241353104	241352222	ENSG00000223374.1	-	antisense	KNOWN	AC005104.3	1	2	0.702045
chr2	241356243	241494841	241425542	ENSG00000006607.13	+	protein_coding	KNOWN	FARP2	23	27	0.623379
chr2	241477905	241477982	241477943	ENSG00000263752.1	+	miRNA	KNOWN	MIR3133	1	1	0.917551
chr2	241478316	241478993	241478654	ENSG00000224232.1	+	processed_pseudogene	KNOWN	AC110299.5	1	1	0.917551
chr2	241492674	241509730	241501202	ENSG00000115694.14	-	protein_coding	KNOWN	STK25	35	12	1.322141
chr2	241544403	241558977	241551690	ENSG00000234235.1	-	antisense	KNOWN	BOK-AS1	1	2	0.902116
chr2	241558721	241574138	241566429	ENSG00000176720.4	+	protein_coding	KNOWN	BOK	1	5	0.968446
chr2	241581922	241582726	241582324	ENSG00000273113.1	+	lincRNA	KNOWN	RP11-367H1.1	1	1	1.043357
chr2	241584405	241637449	241610927	ENSG00000176946.11	-	protein_coding	KNOWN	THAP4	6	6	0.861403
chr2	241584968	241585075	241585021	ENSG00000207186.1	+	rRNA	KNOWN	RNA5SP122	1	1	1.043357
chr2	241637213	241673857	241655535	ENSG00000168397.16	+	protein_coding	KNOWN	ATG4B	26	13	0.862116
chr2	241675742	241686991	241681366	ENSG00000168393.12	-	protein_coding	KNOWN	DTYMK	7	5	1.110026
chr2	241690414	241694289	241692351	ENSG00000228989.1	+	antisense	KNOWN	AC133528.2	1	2	0.776687
chr2	241702035	241729478	241715756	ENSG00000168395.14	+	protein_coding	KNOWN	ING5	11	8	0.917313
chr2	241724615	241725693	241725154	ENSG00000235351.1	-	antisense	KNOWN	AC114730.11	1	2	0.974808
chr2	241734579	241768816	241751697	ENSG00000180902.16	+	protein_coding	KNOWN	D2HGDH	17	12	0.900486
chr2	241734715	241735498	241735106	ENSG00000215692.2	-	antisense	KNOWN	AC114730.8	1	2	0.795599
chr2	241754793	241755740	241755266	ENSG00000234793.1	-	antisense	KNOWN	AC114730.7	1	2	0.986438
chr2	241776825	241804208	241790516	ENSG00000154252.11	+	protein_coding	KNOWN	GAL3ST2	1	4	0.682347
chr2	241800916	241801907	241801411	ENSG00000215023.2	-	antisense	KNOWN	AC114730.5	1	2	0.476135
chr2	241808312	241812016	241810164	ENSG00000224272.2	-	antisense	KNOWN	AC114730.3	3	3	0.705736
chr2	241808825	241817413	241813119	ENSG00000204099.11	+	protein_coding	KNOWN	NEU4	17	5	0.840134
chr2	241844380	241845036	241844708	ENSG00000235151.1	+	lincRNA	KNOWN	AC114730.2	1	2	0.625115
chr2	241849881	241858908	241854394	ENSG00000188389.10	-	protein_coding	KNOWN	PDCD1	3	5	0.826292
chr2	241869600	241873823	241871711	ENSG00000188011.5	+	protein_coding	KNOWN	RTP5	2	3	0.898479
chr2	241881363	242078722	241980042	ENSG00000233806.7	+	processed_transcript	KNOWN	LINC01237	5	4	0.456516
chr2	241893985	241902551	241898268	ENSG00000216921.7	-	lincRNA	KNOWN	AC131097.4	3	3	0.545450
chr2	241970683	241977276	241973979	ENSG00000237940.3	+	lincRNA	KNOWN	AC093642.3	4	6	0.069152
chr2	242001209	242006013	242003611	ENSG00000280119.1	+	TEC	KNOWN	AC093642.1	1	1	0.358683
chr2	242025183	242026176	242025679	ENSG00000226423.1	-	lincRNA	KNOWN	AC093642.4	1	2	0.608176
chr2	242047695	242084138	242065916	ENSG00000232002.1	-	lincRNA	KNOWN	AC093642.6	1	4	0.326118
chr2	242087351	242088457	242087904	ENSG00000261186.2	-	antisense	KNOWN	RP11-341N2.1	1	1	0.331884
chr2	242088633	242160153	242124393	ENSG00000220804.8	+	transcribed_unprocessed_pseudogene	KNOWN	AC093642.5	7	8	0.142202
chr2	242119856	242120053	242119954	ENSG00000224160.1	-	processed_pseudogene	KNOWN	CICP10	1	1	0.119604
chr2	242122287	242122469	242122378	ENSG00000244528.1	+	processed_pseudogene	KNOWN	SEPT14P2	1	1	0.119604
chr2	242175181	242175634	242175407	ENSG00000271153.1	+	processed_pseudogene	KNOWN	RPL23AP88	1	1	0.078381
chr20	87250	97094	92172	ENSG00000178591.6	+	protein_coding	KNOWN	DEFB125	2	2	-0.032747
chr20	142369	145751	144060	ENSG00000125788.5	+	protein_coding	KNOWN	DEFB126	2	3	-0.323046
chr20	157470	159163	158316	ENSG00000088782.4	+	protein_coding	KNOWN	DEFB127	1	2	-0.275740
chr20	173229	173296	173262	ENSG00000274590.1	-	miRNA	NOVEL	AL360078.1	1	1	0.056802
chr20	187853	189681	188767	ENSG00000185982.6	-	protein_coding	KNOWN	DEFB128	1	2	0.056802
chr20	227258	229886	228572	ENSG00000125903.4	+	protein_coding	KNOWN	DEFB129	1	2	0.083771
chr20	257736	261096	259416	ENSG00000186458.4	+	protein_coding	KNOWN	DEFB132	1	2	0.057016
chr20	267186	268857	268021	ENSG00000272874.1	+	lincRNA	KNOWN	RP5-1103G7.10	1	1	0.057016
chr20	270863	290778	280820	ENSG00000196476.11	-	protein_coding	KNOWN	C20orf96	3	11	0.459608
chr20	296968	300321	298644	ENSG00000247315.3	+	protein_coding	KNOWN	ZCCHC3	1	1	0.175247
chr20	320313	348224	334268	ENSG00000225377.5	-	antisense	KNOWN	NRSN2-AS1	2	3	0.768437
chr20	325401	330224	327812	ENSG00000177732.7	+	protein_coding	KNOWN	SOX12	1	1	0.548967
chr20	346782	359660	353221	ENSG00000125841.12	+	protein_coding	KNOWN	NRSN2	10	6	0.846476
chr20	362835	397559	380197	ENSG00000101255.10	+	protein_coding	KNOWN	TRIB3	4	5	0.728256
chr20	407498	430966	419232	ENSG00000125826.19	+	protein_coding	KNOWN	RBCK1	14	12	0.904025
chr20	435480	462553	449016	ENSG00000125875.13	-	protein_coding	KNOWN	TBC1D20	4	10	0.760254
chr20	450663	450762	450712	ENSG00000206797.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.567330
chr20	473591	543821	508706	ENSG00000101266.16	-	protein_coding	KNOWN	CSNK2A1	11	15	0.261860
chr20	603797	610398	607097	ENSG00000125878.5	-	protein_coding	KNOWN	TCF15	2	4	0.029335
chr20	646615	653370	649992	ENSG00000271303.1	-	protein_coding	KNOWN	SRXN1	1	2	0.395920
chr20	646626	675800	661213	ENSG00000270299.1	-	protein_coding	KNOWN	RP5-850E9.3	1	3	0.443549
chr20	661596	676179	668887	ENSG00000215397.3	-	protein_coding	KNOWN	SCRT2	1	2	0.504858
chr20	760080	776015	768047	ENSG00000101276.14	-	protein_coding	KNOWN	SLC52A3	5	6	0.127567
chr20	833715	857463	845589	ENSG00000125898.12	+	protein_coding	KNOWN	FAM110A	6	3	0.343089
chr20	839447	839977	839712	ENSG00000101278.6	-	processed_pseudogene	KNOWN	RPS10L	1	1	0.346233
chr20	869899	916317	893108	ENSG00000101280.7	-	protein_coding	KNOWN	ANGPT4	1	9	0.351495
chr20	958452	1002264	980358	ENSG00000101282.8	-	protein_coding	KNOWN	RSPO4	2	5	0.304581
chr20	1113263	1189415	1151339	ENSG00000125818.17	+	protein_coding	KNOWN	PSMF1	10	8	0.325545
chr20	1117847	1118450	1118148	ENSG00000276026.1	-	antisense	KNOWN	RP4-545L17.11	1	2	0.281916
chr20	1160584	1161697	1161140	ENSG00000215388.3	+	processed_pseudogene	KNOWN	ACTG1P3	1	1	0.183140
chr20	1180561	1185415	1182988	ENSG00000125895.5	-	protein_coding	KNOWN	TMEM74B	3	3	0.549915
chr20	1186092	1207036	1196564	ENSG00000274269.1	+	processed_transcript	KNOWN	RP4-545L17.12	1	2	0.460893
chr20	1203454	1208274	1205864	ENSG00000215595.1	+	protein_coding	KNOWN	C20orf202	1	2	0.440478
chr20	1226056	1296421	1261238	ENSG00000244588.5	+	protein_coding	KNOWN	RAD21L1	4	14	0.243526
chr20	1266316	1309328	1287822	ENSG00000101298.13	+	protein_coding	KNOWN	SNPH	3	7	0.483145
chr20	1309909	1329239	1319574	ENSG00000125775.14	-	protein_coding	KNOWN	SDCBP2	6	9	0.766659
chr20	1317571	1393096	1355333	ENSG00000274322.1	-	protein_coding	KNOWN	RP11-314N13.10	2	6	0.537162
chr20	1320710	1324367	1322538	ENSG00000280162.1	+	TEC	KNOWN	RP11-314N13.9	1	1	0.767152
chr20	1325405	1378734	1352069	ENSG00000234684.6	+	antisense	KNOWN	SDCBP2-AS1	5	4	0.530980
chr20	1361622	1362585	1362103	ENSG00000229728.1	+	antisense	KNOWN	RP11-314N13.3	1	2	0.277684
chr20	1368978	1393172	1381075	ENSG00000088832.14	-	protein_coding	KNOWN	FKBP1A	11	5	0.435324
chr20	1392900	1392961	1392930	ENSG00000276741.1	-	miRNA	KNOWN	MIR6869	1	1	0.358879
chr20	1442162	1473842	1458002	ENSG00000088833.17	-	protein_coding	KNOWN	NSFL1C	13	10	0.445161
chr20	1470741	1491587	1481164	ENSG00000196209.12	-	protein_coding	KNOWN	SIRPB2	8	8	0.599205
chr20	1488550	1488647	1488598	ENSG00000266085.1	+	miRNA	NOVEL	AL109658.1	1	1	0.646897
chr20	1516759	1557653	1537206	ENSG00000242324.1	-	unprocessed_pseudogene	KNOWN	RP4-576H24.2	1	6	-0.013753
chr20	1529056	1529159	1529107	ENSG00000252103.1	-	snRNA	KNOWN	RNU6-917P	1	1	0.042604
chr20	1534251	1558843	1546547	ENSG00000125900.12	-	protein_coding	KNOWN	SIRPD	3	4	-0.043579
chr20	1540144	1620009	1580076	ENSG00000260861.6	-	protein_coding	KNOWN	RP4-576H24.4	3	3	0.288282
chr20	1563521	1620061	1591791	ENSG00000101307.15	-	protein_coding	KNOWN	SIRPB1	15	6	0.428449
chr20	1591392	1591848	1591620	ENSG00000271523.1	+	processed_pseudogene	KNOWN	RP4-576H24.5	1	1	1.091992
chr20	1629152	1657779	1643465	ENSG00000089012.14	-	protein_coding	KNOWN	SIRPG	7	6	0.026057
chr20	1633508	1648472	1640990	ENSG00000237914.5	+	antisense	KNOWN	SIRPG-AS1	2	4	-0.017080
chr20	1665283	1708200	1686741	ENSG00000223750.1	-	unprocessed_pseudogene	KNOWN	SIRPB3P	1	5	-0.067706
chr20	1666360	1666640	1666500	ENSG00000242348.3	+	misc_RNA	KNOWN	RN7SL561P	1	1	0.125939
chr20	1676662	1676907	1676784	ENSG00000236550.1	-	unprocessed_pseudogene	KNOWN	RP4-673D20.5	1	1	-0.019325
chr20	1722045	1722537	1722291	ENSG00000234282.1	-	unprocessed_pseudogene	KNOWN	RP4-673D20.4	1	1	-0.122747
chr20	1756756	1758940	1757848	ENSG00000271461.1	-	processed_pseudogene	KNOWN	RP4-673D20.6	1	1	-0.213353
chr20	1767957	1779995	1773976	ENSG00000232528.3	-	unitary_pseudogene	KNOWN	RP4-673D20.3	2	5	0.372581
chr20	1804016	1817606	1810811	ENSG00000230839.1	-	lincRNA	KNOWN	RP5-968J1.1	1	4	0.633847
chr20	1870053	1870185	1870119	ENSG00000280922.1	+	miRNA	NOVEL	AL121760.1	1	1	0.377578
chr20	1888128	1894374	1891251	ENSG00000276649.1	-	antisense	KNOWN	RP5-858L17.1	3	3	0.428510
chr20	1894167	1940592	1917379	ENSG00000198053.11	+	protein_coding	KNOWN	SIRPA	4	9	0.609686
chr20	1947246	2007517	1977381	ENSG00000233896.1	+	antisense	KNOWN	RP4-684O24.5	1	4	0.393952
chr20	1978757	1994285	1986521	ENSG00000101327.8	-	protein_coding	KNOWN	PDYN	3	4	0.252527
chr20	2075555	2075822	2075688	ENSG00000227663.1	+	processed_pseudogene	KNOWN	RPL7P2	1	1	-0.282688
chr20	2101611	2177038	2139324	ENSG00000125834.12	+	protein_coding	KNOWN	STK35	2	4	0.402425
chr20	2157212	2157281	2157246	ENSG00000280766.1	-	miRNA	NOVEL	AL121899.1	1	1	0.557115
chr20	2207217	2213151	2210184	ENSG00000226644.5	+	lincRNA	KNOWN	RP11-128M1.1	2	2	0.090994
chr20	2296001	2341078	2318539	ENSG00000125780.11	+	protein_coding	KNOWN	TGM3	2	13	0.542256
chr20	2380908	2432753	2406830	ENSG00000166948.9	+	protein_coding	KNOWN	TGM6	3	13	0.266281
chr20	2453010	2453117	2453063	ENSG00000207305.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.199438
chr20	2461634	2470853	2466243	ENSG00000125835.17	-	protein_coding	KNOWN	SNRPB	4	9	0.212116
chr20	2467212	2508907	2488059	ENSG00000256566.1	-	protein_coding	KNOWN	RP4-734P14.4	1	7	0.398218
chr20	2481817	2524702	2503259	ENSG00000088876.11	-	protein_coding	KNOWN	ZNF343	8	8	0.392387
chr20	2536607	2641784	2589195	ENSG00000149488.12	+	protein_coding	KNOWN	TMC2	2	20	0.249754
chr20	2652145	2658393	2655269	ENSG00000101361.14	+	protein_coding	KNOWN	NOP56	20	12	0.782664
chr20	2652777	2652842	2652809	ENSG00000221062.1	+	miRNA	KNOWN	MIR1292	1	1	0.782664
chr20	2654212	2654286	2654249	ENSG00000221116.1	+	snoRNA	KNOWN	SNORD110	1	1	0.782664
chr20	2655067	2655198	2655132	ENSG00000271798.1	+	snoRNA	KNOWN	SNORA51	1	1	0.782664
chr20	2656097	2656182	2656139	ENSG00000212498.1	+	snoRNA	KNOWN	SNORD86	1	1	0.782664
chr20	2656624	2656694	2656659	ENSG00000229686.1	+	snoRNA	KNOWN	SNORD56	1	1	0.782664
chr20	2656939	2657010	2656974	ENSG00000226572.1	+	snoRNA	KNOWN	SNORD57	1	1	0.782664
chr20	2658395	2664219	2661307	ENSG00000101365.20	-	protein_coding	KNOWN	IDH3B	12	13	0.782664
chr20	2664352	2665874	2665113	ENSG00000228293.1	+	antisense	KNOWN	RP4-686C3.7	1	2	0.782664
chr20	2692878	2760108	2726493	ENSG00000088881.20	+	protein_coding	KNOWN	EBF4	11	18	0.475302
chr20	2780614	2781041	2780827	ENSG00000226217.1	+	processed_pseudogene	KNOWN	RPL19P1	1	1	0.552181
chr20	2794069	2800637	2797353	ENSG00000088882.7	-	protein_coding	KNOWN	CPXM1	1	14	0.326457
chr20	2814968	2818066	2816517	ENSG00000241690.3	+	protein_coding	KNOWN	RP5-860F19.8	1	3	0.775688
chr20	2814987	2815833	2815410	ENSG00000258713.2	+	protein_coding	KNOWN	C20orf141	2	3	0.775688
chr20	2816302	2820284	2818293	ENSG00000198326.9	+	protein_coding	KNOWN	TMEM239	2	2	0.775688
chr20	2835314	2841190	2838252	ENSG00000132635.16	-	protein_coding	KNOWN	PCED1A	6	8	0.595566
chr20	2840703	2866732	2853717	ENSG00000215305.9	+	protein_coding	KNOWN	VPS16	8	24	0.471344
chr20	2864184	3039076	2951630	ENSG00000132670.20	+	protein_coding	KNOWN	PTPRA	8	28	0.427755
chr20	3043622	3045747	3044684	ENSG00000125787.11	+	protein_coding	KNOWN	GNRH2	4	4	0.569314
chr20	3045945	3048254	3047099	ENSG00000125901.5	+	protein_coding	KNOWN	MRPS26	1	4	0.569314
chr20	3071620	3072517	3072068	ENSG00000101405.3	+	protein_coding	KNOWN	OXT	1	3	0.621883
chr20	3082556	3084724	3083640	ENSG00000101200.5	-	protein_coding	KNOWN	AVP	1	3	0.621883
chr20	3094171	3094509	3094340	ENSG00000263905.2	+	misc_RNA	KNOWN	RN7SL555P	1	1	0.821634
chr20	3106913	3150867	3128890	ENSG00000235958.5	+	antisense	KNOWN	UBOX5-AS1	2	7	0.744197
chr20	3107573	3160196	3133884	ENSG00000185019.16	-	protein_coding	KNOWN	UBOX5	3	5	0.718082
chr20	3146519	3159897	3153208	ENSG00000215251.3	-	protein_coding	KNOWN	FASTKD5	1	2	0.622474
chr20	3162617	3173592	3168104	ENSG00000088899.14	-	protein_coding	KNOWN	RP5-1187M17.10	3	6	0.726491
chr20	3190350	3204685	3197517	ENSG00000198171.12	-	protein_coding	KNOWN	DDRGK1	4	9	0.682348
chr20	3208868	3223870	3216369	ENSG00000125877.12	+	protein_coding	KNOWN	ITPA	10	8	0.761352
chr20	3227417	3239190	3233303	ENSG00000088836.12	-	protein_coding	KNOWN	SLC4A11	7	20	1.040825
chr20	3239705	3245382	3242543	ENSG00000277287.1	+	lincRNA	KNOWN	RP4-794I6.4	1	1	1.117527
chr20	3249305	3407625	3328465	ENSG00000088854.12	-	protein_coding	KNOWN	C20orf194	2	37	0.695572
chr20	3360036	3360142	3360089	ENSG00000201294.1	+	snRNA	KNOWN	RNU6-1019P	1	1	0.307260
chr20	3361880	3362324	3362102	ENSG00000226632.1	-	processed_pseudogene	KNOWN	UBE2V1P1	1	1	0.307260
chr20	3384229	3384440	3384334	ENSG00000201346.2	+	snoRNA	NOVEL	U3	1	1	0.539451
chr20	3404216	3404285	3404250	ENSG00000266355.1	+	miRNA	NOVEL	AL117334.1	1	1	0.658807
chr20	3465177	3465444	3465310	ENSG00000225116.1	-	processed_pseudogene	KNOWN	RP11-137F15.1	1	1	0.371146
chr20	3471040	3651122	3561081	ENSG00000088812.17	+	protein_coding	KNOWN	ATRN	2	29	0.385662
chr20	3489529	3491005	3490267	ENSG00000230568.1	-	processed_pseudogene	KNOWN	SF3A3P1	1	1	0.378394
chr20	3507007	3507112	3507059	ENSG00000264957.1	+	miRNA	NOVEL	AL109805.1	1	1	0.219482
chr20	3659292	3663399	3661345	ENSG00000125861.14	-	protein_coding	KNOWN	GFRA4	3	6	0.638274
chr20	3667965	3682246	3675105	ENSG00000149451.17	-	protein_coding	KNOWN	ADAM33	7	22	1.115538
chr20	3686970	3707128	3697049	ENSG00000088827.12	-	protein_coding	KNOWN	SIGLEC1	2	21	1.192019
chr20	3732667	3753111	3742889	ENSG00000132622.10	+	protein_coding	KNOWN	HSPA12B	2	13	0.839283
chr20	3753508	3768387	3760947	ENSG00000101220.17	-	protein_coding	KNOWN	C20orf27	4	6	0.931056
chr20	3777504	3781448	3779476	ENSG00000101222.12	-	protein_coding	KNOWN	SPEF1	3	7	0.891173
chr20	3783851	3786690	3785270	ENSG00000125817.7	-	protein_coding	KNOWN	CENPB	1	1	0.891173
chr20	3786772	3806121	3796446	ENSG00000101224.17	+	protein_coding	KNOWN	CDC25B	9	16	0.923470
chr20	3808357	3812434	3810395	ENSG00000275491.1	+	lincRNA	KNOWN	RP5-1009E24.8	1	4	1.044491
chr20	3811384	3823882	3817633	ENSG00000274949.1	+	processed_transcript	KNOWN	RP5-1009E24.9	1	3	1.121739
chr20	3820524	3828837	3824680	ENSG00000125843.10	+	protein_coding	KNOWN	AP5S1	5	3	1.121739
chr20	3846799	3876123	3861461	ENSG00000088888.17	+	protein_coding	KNOWN	MAVS	2	7	0.844460
chr20	3888239	3888868	3888553	ENSG00000229539.1	-	antisense	KNOWN	RP11-119B16.2	1	2	0.995484
chr20	3888839	3929882	3909360	ENSG00000125779.21	+	protein_coding	KNOWN	PANK2	10	7	0.751137
chr20	3917494	3917571	3917532	ENSG00000199024.1	+	miRNA	KNOWN	MIR103A2	1	1	0.923869
chr20	3921279	3923400	3922339	ENSG00000275582.1	-	antisense	KNOWN	RP4-681N20.5	1	2	0.923869
chr20	3927309	4015582	3971445	ENSG00000101236.16	-	protein_coding	KNOWN	RNF24	4	7	0.548751
chr20	4023917	4024444	4024180	ENSG00000226608.3	+	processed_pseudogene	KNOWN	FTLP3	1	1	0.475597
chr20	4059633	4060113	4059873	ENSG00000215063.3	-	processed_pseudogene	KNOWN	RPL21P2	1	1	0.445935
chr20	4070152	4075165	4072658	ENSG00000205300.3	-	lincRNA	KNOWN	RP11-352D3.2	1	3	0.578464
chr20	4120980	4187747	4154363	ENSG00000088826.17	+	protein_coding	KNOWN	SMOX	12	9	0.685591
chr20	4193065	4195943	4194504	ENSG00000230176.2	+	antisense	KNOWN	LINC01433	1	3	0.599878
chr20	4220631	4249074	4234852	ENSG00000171873.7	-	protein_coding	KNOWN	ADRA1D	2	2	0.694847
chr20	4431161	4431673	4431417	ENSG00000236387.1	-	lincRNA	KNOWN	RP11-307O10.1	1	2	0.504931
chr20	4475638	4525200	4500419	ENSG00000238282.1	+	lincRNA	KNOWN	RP5-1164C1.2	1	2	0.137535
chr20	4590993	4591300	4591146	ENSG00000228210.1	-	processed_pseudogene	KNOWN	RPL7AL2	1	1	0.215506
chr20	4629427	4630219	4629823	ENSG00000226948.1	-	processed_pseudogene	KNOWN	RPS4XP2	1	1	0.470053
chr20	4686236	4701590	4693913	ENSG00000171867.16	+	protein_coding	KNOWN	PRNP	4	2	0.548780
chr20	4721910	4728460	4725185	ENSG00000171864.4	+	protein_coding	KNOWN	PRND	1	2	0.346233
chr20	4731282	4740668	4735975	ENSG00000180259.9	-	protein_coding	KNOWN	PRNT	3	2	0.349790
chr20	4735669	4736673	4736171	ENSG00000231071.1	-	processed_pseudogene	KNOWN	RP5-1068H6.1	1	2	0.349790
chr20	4761300	4761696	4761498	ENSG00000278595.1	+	lincRNA	KNOWN	RP5-1068H6.6	1	1	0.665594
chr20	4780023	4823645	4801834	ENSG00000101265.15	-	protein_coding	KNOWN	RASSF2	3	12	0.291519
chr20	4852356	5010293	4931324	ENSG00000089057.14	-	protein_coding	KNOWN	SLC23A2	5	17	0.423895
chr20	4868984	4869118	4869051	ENSG00000252096.1	+	snoRNA	NOVEL	SNORA31	1	1	0.189603
chr20	5013520	5013724	5013622	ENSG00000234573.1	-	processed_pseudogene	KNOWN	RP5-1116H23.1	1	1	0.563134
chr20	5045761	5046276	5046018	ENSG00000277087.1	-	lincRNA	KNOWN	RP5-1116H23.6	1	1	0.132406
chr20	5049857	5050321	5050089	ENSG00000276768.1	-	lincRNA	KNOWN	RP5-1116H23.5	1	1	0.348096
chr20	5061037	5061340	5061188	ENSG00000278816.1	-	lincRNA	KNOWN	RP5-1116H23.4	1	1	0.443214
chr20	5066082	5068154	5067118	ENSG00000277425.1	-	lincRNA	KNOWN	RP5-1116H23.3	1	3	0.443214
chr20	5068232	5113103	5090667	ENSG00000089063.14	-	protein_coding	KNOWN	TMEM230	11	6	0.285858
chr20	5098387	5098476	5098431	ENSG00000212536.1	-	rRNA	KNOWN	RNA5SP474	1	1	0.317873
chr20	5113993	5114083	5114038	ENSG00000252367.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.182190
chr20	5114953	5126626	5120789	ENSG00000132646.10	-	protein_coding	KNOWN	PCNA	2	7	0.182190
chr20	5121417	5121539	5121478	ENSG00000212517.1	-	snoRNA	NOVEL	SNORA26	1	1	0.182190
chr20	5126786	5197887	5162336	ENSG00000101290.13	+	protein_coding	KNOWN	CDS2	6	13	0.277964
chr20	5292388	5292831	5292609	ENSG00000225022.1	-	processed_pseudogene	KNOWN	UBE2D3P1	1	1	-0.211915
chr20	5302040	5314369	5308204	ENSG00000101292.7	-	protein_coding	KNOWN	PROKR2	1	2	-0.070092
chr20	5346006	5346160	5346083	ENSG00000200313.1	-	rRNA	KNOWN	RNA5-8SP7	1	1	-0.336592
chr20	5407564	5407876	5407720	ENSG00000276688.1	+	lincRNA	KNOWN	RP5-828H9.4	1	1	-0.243192
chr20	5426895	5471094	5448994	ENSG00000226995.7	-	lincRNA	KNOWN	LINC00658	7	8	-0.126614
chr20	5471207	5475182	5473194	ENSG00000230563.2	+	lincRNA	KNOWN	RP5-828H9.1	2	2	-0.009155
chr20	5496067	5504613	5500340	ENSG00000205181.5	-	lincRNA	KNOWN	LINC00654	2	3	0.069965
chr20	5499116	5502881	5500998	ENSG00000266908.1	+	lincRNA	KNOWN	RP5-1022P6.7	1	2	0.069965
chr20	5507875	5510002	5508938	ENSG00000225640.1	-	lincRNA	KNOWN	RP5-1022P6.4	1	3	0.070334
chr20	5532878	5533335	5533106	ENSG00000225831.1	+	processed_pseudogene	KNOWN	RPS18P1	1	1	0.365315
chr20	5533628	5535889	5534758	ENSG00000235820.1	+	antisense	KNOWN	RP5-1022P6.5	1	3	0.365315
chr20	5544404	5611026	5577715	ENSG00000125772.12	-	protein_coding	KNOWN	GPCPD1	7	20	0.003126
chr20	5548840	5549481	5549160	ENSG00000233578.1	+	processed_pseudogene	KNOWN	EIF4EP1	1	1	0.365315
chr20	5750393	5863912	5807152	ENSG00000171984.14	+	protein_coding	KNOWN	C20orf196	4	4	0.099069
chr20	5890055	5890212	5890133	ENSG00000202380.1	+	snRNA	KNOWN	RNU1-55P	1	1	0.099486
chr20	5911430	5925361	5918395	ENSG00000089199.9	+	protein_coding	KNOWN	CHGB	3	5	-0.265078
chr20	5928085	5929318	5928701	ENSG00000215589.3	-	processed_pseudogene	KNOWN	RP5-967N21.2	1	1	-0.265078
chr20	5937235	5950558	5943896	ENSG00000089195.14	-	protein_coding	KNOWN	TRMT6	5	11	-0.066498
chr20	5950652	5998977	5974814	ENSG00000125885.13	+	protein_coding	KNOWN	MCM8	5	19	-0.022393
chr20	5964538	5964650	5964594	ENSG00000207380.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.021390
chr20	5965180	5965511	5965345	ENSG00000231961.1	+	processed_pseudogene	KNOWN	RP5-967N21.7	1	1	-0.021390
chr20	5990943	6005821	5998382	ENSG00000278719.1	-	antisense	KNOWN	MCM8-AS1	1	5	-0.242427
chr20	5992260	5992353	5992306	ENSG00000263473.2	-	miRNA	NOVEL	AL035461.1	1	1	-0.242427
chr20	6000418	6000941	6000679	ENSG00000275632.1	+	lincRNA	KNOWN	RP5-967N21.11	1	1	-0.242427
chr20	6001733	6002030	6001881	ENSG00000263755.2	+	misc_RNA	KNOWN	RN7SL498P	1	1	-0.242427
chr20	6006090	6040053	6023071	ENSG00000088766.11	+	protein_coding	KNOWN	CRLS1	7	8	-0.182728
chr20	6040778	6054049	6047413	ENSG00000125872.7	-	protein_coding	KNOWN	LRRN4	1	5	0.093977
chr20	6065966	6067897	6066931	ENSG00000278192.1	-	lincRNA	KNOWN	RP5-1056H1.2	1	1	0.395384
chr20	6074845	6123544	6099194	ENSG00000101311.15	-	protein_coding	KNOWN	FERMT1	4	15	0.101114
chr20	6200989	6202191	6201590	ENSG00000233402.1	-	processed_pseudogene	KNOWN	TARDBPP1	1	1	-0.208762
chr20	6213699	6215381	6214540	ENSG00000234241.1	+	processed_pseudogene	KNOWN	RP4-775C13.1	1	1	-0.707710
chr20	6219199	6219443	6219321	ENSG00000271565.1	+	processed_pseudogene	KNOWN	RP4-775C13.2	1	2	-0.707710
chr20	6220330	6220759	6220544	ENSG00000276915.1	+	processed_pseudogene	KNOWN	RP4-775C13.3	1	1	-0.707710
chr20	6228794	6228948	6228871	ENSG00000221449.1	-	miRNA	NOVEL	AL109618.1	1	1	-0.707710
chr20	6446723	6528459	6487591	ENSG00000229876.1	+	lincRNA	KNOWN	CASC20	1	3	-0.435999
chr20	6731258	6736136	6733697	ENSG00000228482.1	-	lincRNA	KNOWN	RP5-859D4.3	1	3	-0.372971
chr20	6767664	6780280	6773972	ENSG00000125845.6	+	protein_coding	KNOWN	BMP2	1	3	-0.192969
chr20	7069614	7146656	7108135	ENSG00000232271.1	+	lincRNA	KNOWN	RP4-764O22.1	1	2	-0.532417
chr20	7146467	7254202	7200334	ENSG00000228888.1	-	lincRNA	KNOWN	LINC01428	1	8	-0.547837
chr20	7256580	7258214	7257397	ENSG00000238102.1	-	lincRNA	KNOWN	RP11-19D2.1	1	2	-0.184133
chr20	7302056	7307432	7304744	ENSG00000261249.1	-	lincRNA	KNOWN	RP11-19D2.2	1	2	-0.598680
chr20	7347467	7367632	7357549	ENSG00000224711.1	+	lincRNA	KNOWN	RP5-988G17.1	1	3	-0.556128
chr20	7371608	7371692	7371650	ENSG00000278159.1	+	miRNA	KNOWN	MIR8062	1	1	-0.508652
chr20	7633562	7633851	7633706	ENSG00000240584.3	-	misc_RNA	KNOWN	RN7SL547P	1	1	-0.429245
chr20	7696886	7696977	7696931	ENSG00000221726.2	-	miRNA	NOVEL	AL031653.1	1	1	-0.501099
chr20	7831798	7832322	7832060	ENSG00000215586.2	-	processed_pseudogene	KNOWN	RP5-836E8.1	1	1	-0.371664
chr20	7867327	7867614	7867470	ENSG00000277315.1	+	processed_pseudogene	KNOWN	RP1-209B9.2	1	1	0.005056
chr20	7882981	7940474	7911727	ENSG00000101323.4	-	protein_coding	KNOWN	HAO1	1	8	-0.384986
chr20	7977348	8019829	7998588	ENSG00000125827.8	-	protein_coding	KNOWN	TMX4	4	8	-0.344445
chr20	8019223	8043512	8031367	ENSG00000229766.6	+	antisense	KNOWN	RP5-971N18.3	3	7	-0.455044
chr20	8097824	8099774	8098799	ENSG00000226262.1	-	processed_pseudogene	KNOWN	PHKBP1	1	1	0.008160
chr20	8114453	8968360	8541406	ENSG00000182621.16	+	protein_coding	KNOWN	PLCB1	20	33	-0.020779
chr20	8248704	8256918	8252811	ENSG00000225479.1	+	sense_intronic	KNOWN	PLCB1-IT1	2	2	0.047068
chr20	8610154	8610240	8610197	ENSG00000222298.1	-	miRNA	NOVEL	AL031655.1	1	1	-0.243429
chr20	8831186	8831393	8831289	ENSG00000201348.1	+	snoRNA	KNOWN	RNU105B	1	1	0.313164
chr20	8929895	8930038	8929966	ENSG00000228438.1	-	processed_pseudogene	KNOWN	RP5-859I17.2	1	1	0.302768
chr20	8934984	8935481	8935232	ENSG00000276385.1	-	processed_pseudogene	KNOWN	RP5-859I17.3	1	1	0.361880
chr20	8998849	8999100	8998974	ENSG00000275222.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.136709
chr20	9068763	9481242	9275002	ENSG00000101333.16	+	protein_coding	KNOWN	PLCB4	13	38	0.136756
chr20	9505180	9514998	9510089	ENSG00000225988.1	-	antisense	KNOWN	LAMP5-AS1	1	5	0.051495
chr20	9514358	9530524	9522441	ENSG00000125869.9	+	protein_coding	KNOWN	LAMP5	2	6	0.105201
chr20	9537389	9839041	9688215	ENSG00000101349.16	-	protein_coding	KNOWN	PAK7	3	11	-0.303093
chr20	9575608	9577689	9576648	ENSG00000232738.1	+	antisense	KNOWN	RP5-986I17.2	1	2	-0.184020
chr20	9986088	10007116	9996602	ENSG00000243961.2	+	lincRNA	KNOWN	RP5-839B4.8	1	2	-0.293268
chr20	9986126	10058303	10022214	ENSG00000132623.15	+	protein_coding	KNOWN	ANKEF1	4	11	-0.319384
chr20	10021978	10368776	10195377	ENSG00000227906.7	-	antisense	KNOWN	SNAP25-AS1	8	5	-0.163189
chr20	10025917	10026168	10026042	ENSG00000276525.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.262117
chr20	10173520	10196990	10185255	ENSG00000230506.1	+	lincRNA	KNOWN	RP11-416N4.4	1	2	-0.314106
chr20	10180235	10185775	10183005	ENSG00000232448.1	+	lincRNA	KNOWN	RP11-416N4.1	1	3	-0.308249
chr20	10218830	10307418	10263124	ENSG00000132639.12	+	protein_coding	KNOWN	SNAP25	5	8	0.019078
chr20	10334419	10334698	10334558	ENSG00000237005.1	+	processed_pseudogene	KNOWN	HIGD1AP15	1	1	0.091992
chr20	10349157	10349628	10349392	ENSG00000214835.3	-	processed_pseudogene	KNOWN	RPL23AP6	1	1	0.091992
chr20	10385779	10387806	10386792	ENSG00000230750.1	+	processed_pseudogene	KNOWN	SDAD1P2	1	1	-0.034272
chr20	10401009	10434222	10417615	ENSG00000125863.17	-	protein_coding	KNOWN	MKKS	3	6	-0.120583
chr20	10435303	10636829	10536066	ENSG00000149346.14	+	protein_coding	KNOWN	SLX4IP	2	8	0.089322
chr20	10612861	10614229	10613545	ENSG00000235036.4	-	processed_pseudogene	KNOWN	RP5-1099D15.1	1	1	0.077778
chr20	10637684	10674107	10655895	ENSG00000101384.11	-	protein_coding	KNOWN	JAG1	9	26	0.227367
chr20	10649636	10649695	10649665	ENSG00000273745.1	-	miRNA	KNOWN	MIR6870	1	1	0.366933
chr20	10672928	10994924	10833926	ENSG00000270792.5	+	antisense	KNOWN	RP11-103J8.1	4	5	-0.225568
chr20	10753090	10753966	10753528	ENSG00000224961.1	+	lincRNA	KNOWN	RP1-278O22.1	1	2	-0.276934
chr20	10753278	10765286	10759282	ENSG00000234900.1	-	lincRNA	KNOWN	RP1-278O22.2	1	3	-0.276934
chr20	10875333	10909272	10892302	ENSG00000232900.1	-	lincRNA	KNOWN	RP4-697P8.3	1	7	-0.339178
chr20	10888582	10889088	10888835	ENSG00000217809.1	-	processed_pseudogene	KNOWN	FAT1P1	1	1	-0.202456
chr20	11001304	11001763	11001533	ENSG00000270777.1	+	lincRNA	KNOWN	RP11-103J8.2	1	1	-0.347540
chr20	11027760	11029366	11028563	ENSG00000125899.7	+	lincRNA	KNOWN	C20orf187	1	3	-0.432088
chr20	11234170	11301525	11267847	ENSG00000230990.1	-	lincRNA	KNOWN	RP4-734C18.1	2	8	-0.308528
chr20	11345383	11345855	11345619	ENSG00000235544.1	-	processed_pseudogene	KNOWN	RPS11P1	1	1	-0.492971
chr20	11536406	11541647	11539026	ENSG00000282478.1	-	lincRNA	KNOWN	RP5-1128N12.3	1	3	-0.403139
chr20	11608436	11609048	11608742	ENSG00000271397.1	-	processed_pseudogene	KNOWN	RP5-1128N12.2	1	1	-0.467436
chr20	11621051	11621477	11621264	ENSG00000237256.1	+	processed_pseudogene	KNOWN	PGAM3P	1	1	-0.239990
chr20	11685144	11687323	11686233	ENSG00000261411.1	-	lincRNA	KNOWN	RP11-268G13.1	1	1	-0.049736
chr20	11800463	11870715	11835589	ENSG00000228422.3	-	lincRNA	KNOWN	LINC00687	3	2	-0.042948
chr20	11818821	11819091	11818956	ENSG00000222281.1	-	misc_RNA	KNOWN	RN7SKP111	1	1	-0.058425
chr20	11838355	11838574	11838464	ENSG00000271298.1	+	processed_pseudogene	KNOWN	RP5-1012F16.2	1	1	0.212286
chr20	11890723	11926609	11908666	ENSG00000132640.14	+	protein_coding	KNOWN	BTBD3	15	6	0.130739
chr20	11909404	11918677	11914040	ENSG00000236526.1	-	antisense	KNOWN	RP4-742J24.2	1	3	0.259711
chr20	12243895	12244296	12244095	ENSG00000235292.1	-	lincRNA	KNOWN	RP4-796I8.1	1	2	-0.375614
chr20	12305613	12316485	12311049	ENSG00000230437.1	-	lincRNA	KNOWN	RP11-102J14.1	1	2	-0.243836
chr20	12380056	12381255	12380655	ENSG00000235698.1	+	processed_pseudogene	KNOWN	PA2G4P2	1	1	-0.242798
chr20	12865202	12952519	12908860	ENSG00000233048.1	-	lincRNA	KNOWN	RP5-1069C8.2	1	12	-0.246147
chr20	12934877	12935783	12935330	ENSG00000269931.1	-	lincRNA	KNOWN	RP5-1069C8.3	1	1	0.006600
chr20	12950338	12951627	12950982	ENSG00000234265.1	+	lincRNA	KNOWN	RP11-157E14.1	1	2	-0.301490
chr20	13008979	13169103	13089041	ENSG00000172296.12	+	protein_coding	KNOWN	SPTLC3	6	12	-0.281881
chr20	13073667	13074312	13073989	ENSG00000271426.1	-	processed_pseudogene	KNOWN	RP4-718P11.1	1	1	-0.570973
chr20	13221771	13300651	13261211	ENSG00000101230.5	+	protein_coding	KNOWN	ISM1	1	6	-0.008944
chr20	13237801	13239674	13238737	ENSG00000226263.1	-	antisense	KNOWN	ISM1-AS1	1	3	0.056586
chr20	13244064	13245369	13244716	ENSG00000225956.1	-	antisense	KNOWN	RP5-1077I2.3	1	2	0.056586
chr20	13368291	13368703	13368497	ENSG00000278153.1	-	lincRNA	KNOWN	RP4-585I14.3	1	1	0.009530
chr20	13389392	13638940	13514166	ENSG00000089123.15	-	protein_coding	KNOWN	TASP1	7	14	-0.188487
chr20	13392677	13393674	13393175	ENSG00000236811.1	+	processed_pseudogene	KNOWN	GAPDHP2	1	1	0.269450
chr20	13509635	13509744	13509689	ENSG00000275098.1	-	miRNA	NOVEL	AL158089.1	1	1	-0.137209
chr20	13714322	13784886	13749604	ENSG00000089048.14	-	protein_coding	KNOWN	ESF1	2	14	-0.095423
chr20	13784950	13821582	13803266	ENSG00000101247.17	+	protein_coding	KNOWN	NDUFAF5	16	12	-0.094545
chr20	13849247	13996443	13922845	ENSG00000101251.11	-	protein_coding	KNOWN	SEL1L2	11	21	-0.105601
chr20	13955764	13955857	13955810	ENSG00000221328.1	-	miRNA	NOVEL	AL117333.1	1	1	-0.333314
chr20	13973316	13973424	13973370	ENSG00000212247.1	-	snRNA	KNOWN	RNU6-278P	1	1	-0.054850
chr20	13995369	16053197	15024283	ENSG00000172264.16	+	protein_coding	KNOWN	MACROD2	14	17	-0.342030
chr20	14003508	14003699	14003603	ENSG00000230935.1	+	processed_pseudogene	KNOWN	RPS3P1	1	1	-0.440229
chr20	14127400	14128336	14127868	ENSG00000234187.1	+	processed_pseudogene	KNOWN	AIMP1P1	1	1	-0.207568
chr20	14223041	14223325	14223183	ENSG00000239923.3	+	misc_RNA	KNOWN	RN7SL864P	1	1	-0.140182
chr20	14245042	14245139	14245090	ENSG00000276456.1	-	miRNA	NOVEL	AL136992.1	1	1	-0.081544
chr20	14322988	14337616	14330302	ENSG00000125848.9	-	protein_coding	KNOWN	FLRT3	3	3	-0.268627
chr20	14352320	14352425	14352372	ENSG00000199570.1	+	snRNA	KNOWN	RNU6-228P	1	1	-0.421417
chr20	14547184	14547623	14547403	ENSG00000227563.1	-	processed_pseudogene	KNOWN	RNF11B	1	1	-0.362267
chr20	14554384	14636524	14595454	ENSG00000227927.2	+	sense_intronic	KNOWN	MACROD2-IT1	2	5	-0.476733
chr20	14757563	14758056	14757809	ENSG00000213950.2	+	processed_pseudogene	KNOWN	RPS10P2	1	1	-0.341905
chr20	14884253	14929515	14906884	ENSG00000235914.1	-	antisense	KNOWN	MACROD2-AS1	2	3	-0.302430
chr20	14933843	14935363	14934603	ENSG00000237832.1	-	antisense	KNOWN	RP5-974N19.1	1	3	-0.615072
chr20	15021553	15021659	15021606	ENSG00000199803.1	-	snRNA	KNOWN	RNU6-1159P	1	1	-0.642484
chr20	15022852	15022958	15022905	ENSG00000201180.1	+	snRNA	KNOWN	RNU6-115P	1	1	-0.642484
chr20	15280764	15280873	15280818	ENSG00000222500.1	-	rRNA	KNOWN	RNA5SP475	1	1	-0.235894
chr20	15552157	15552885	15552521	ENSG00000225181.1	-	antisense	KNOWN	RP11-388K2.1	1	2	-0.251082
chr20	15558380	15558468	15558424	ENSG00000212111.2	-	miRNA	NOVEL	AL121584.1	1	1	-0.251082
chr20	15619494	15619819	15619656	ENSG00000224274.1	-	processed_pseudogene	KNOWN	ENSAP1	1	1	-0.171043
chr20	16223750	16224535	16224142	ENSG00000225622.1	-	processed_pseudogene	KNOWN	PPIAP17	1	2	0.037249
chr20	16272104	16573433	16422768	ENSG00000089177.17	-	protein_coding	KNOWN	KIF16B	4	26	-0.180258
chr20	16410297	16410391	16410344	ENSG00000221448.1	-	miRNA	NOVEL	AL118509.1	1	1	-0.021777
chr20	16551149	16553012	16552080	ENSG00000280240.1	-	protein_coding	KNOWN	AL049794.1	1	1	-0.019040
chr20	16576068	16579615	16577841	ENSG00000273998.1	+	lincRNA	KNOWN	RP4-777L9.2	1	2	0.156532
chr20	16580258	16580622	16580440	ENSG00000275728.1	+	lincRNA	KNOWN	RP4-777L9.3	1	1	0.156532
chr20	16586333	16586693	16586513	ENSG00000226229.2	-	processed_pseudogene	KNOWN	RPLP0P1	1	1	0.156532
chr20	16670641	16670742	16670691	ENSG00000200494.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.120669
chr20	16684108	16684404	16684256	ENSG00000235208.2	-	processed_pseudogene	KNOWN	RPL7AL3	1	1	-0.120669
chr20	16714844	16730948	16722896	ENSG00000228809.2	-	processed_transcript	KNOWN	RP4-705D16.3	2	4	0.067423
chr20	16729961	16742563	16736262	ENSG00000125870.10	+	protein_coding	KNOWN	SNRPB2	3	7	0.154789
chr20	16748358	16770062	16759210	ENSG00000125879.4	+	protein_coding	KNOWN	OTOR	3	4	-0.206429
chr20	16857962	16864148	16861055	ENSG00000236985.1	-	lincRNA	KNOWN	RP5-1195D24.1	1	3	-0.458822
chr20	16982831	16983033	16982932	ENSG00000212165.2	-	snoRNA	NOVEL	U3	1	1	-0.228049
chr20	17187510	17187616	17187563	ENSG00000251955.1	+	snRNA	KNOWN	RNU6-27P	1	1	-0.094421
chr20	17188134	17188344	17188239	ENSG00000220540.1	+	processed_pseudogene	KNOWN	RP1-298M8.1	1	1	-0.094421
chr20	17209060	17209220	17209140	ENSG00000238833.1	+	snRNA	KNOWN	RNU1-131P	1	1	-0.184718
chr20	17226107	17484578	17355342	ENSG00000125851.9	+	protein_coding	KNOWN	PCSK2	5	13	-0.185605
chr20	17479085	17479431	17479258	ENSG00000232241.1	-	processed_pseudogene	KNOWN	DYNLT3P1	1	1	0.017138
chr20	17493905	17569220	17531562	ENSG00000125864.11	-	protein_coding	KNOWN	BFSP1	5	10	0.333145
chr20	17516843	17517307	17517075	ENSG00000232333.1	+	processed_pseudogene	KNOWN	RPS27AP2	1	1	0.170347
chr20	17565501	17565851	17565676	ENSG00000277373.1	-	sense_intronic	KNOWN	RP11-462D18.4	1	1	0.331662
chr20	17569863	17609919	17589891	ENSG00000125868.15	+	protein_coding	KNOWN	DSTN	3	5	0.336805
chr20	17576206	17576510	17576358	ENSG00000202260.1	-	misc_RNA	KNOWN	RN7SKP69	1	1	0.347937
chr20	17599255	17599807	17599531	ENSG00000230495.1	-	processed_pseudogene	KNOWN	RP11-462D18.2	1	1	0.325664
chr20	17613678	17682295	17647986	ENSG00000125844.15	-	protein_coding	KNOWN	RRBP1	11	26	0.751515
chr20	17693672	17735871	17714771	ENSG00000125888.14	+	protein_coding	KNOWN	BANF2	5	4	0.520806
chr20	17842583	17842728	17842655	ENSG00000221220.1	+	miRNA	NOVEL	AL035045.1	1	1	0.430794
chr20	17887363	17888160	17887761	ENSG00000233625.1	-	lincRNA	KNOWN	RP5-905G11.3	1	2	0.548506
chr20	17903762	17903861	17903811	ENSG00000212555.1	+	snRNA	KNOWN	RNU6-192P	1	1	0.605731
chr20	17941597	17968980	17955288	ENSG00000089006.16	-	protein_coding	KNOWN	SNX5	19	14	0.481839
chr20	17956979	18059188	18008083	ENSG00000125850.10	-	protein_coding	KNOWN	OVOL2	5	4	0.265635
chr20	17962710	17962946	17962828	ENSG00000212232.1	-	snoRNA	KNOWN	SNORD17	1	1	0.253743
chr20	17968913	17991122	17980017	ENSG00000125871.13	+	protein_coding	KNOWN	MGME1	5	5	0.417199
chr20	18011955	18012284	18012119	ENSG00000218902.3	+	processed_pseudogene	KNOWN	PTMAP3	1	1	0.315767
chr20	18059493	18071008	18065250	ENSG00000229262.1	+	antisense	KNOWN	RP4-726N1.2	1	2	0.369119
chr20	18090116	18090715	18090415	ENSG00000227343.1	-	processed_pseudogene	KNOWN	RPL15P1	1	1	0.218256
chr20	18095571	18095632	18095601	ENSG00000252597.1	-	snRNA	KNOWN	RNU7-137P	1	1	0.218256
chr20	18113467	18113579	18113523	ENSG00000207282.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.129711
chr20	18137873	18143169	18140521	ENSG00000232838.3	+	protein_coding	KNOWN	PET117	1	2	-0.073594
chr20	18138118	18188387	18163252	ENSG00000149474.13	+	protein_coding	KNOWN	CSRP2BP	7	10	0.084065
chr20	18169905	18169989	18169947	ENSG00000251713.1	-	miRNA	NOVEL	AL050321.1	1	1	0.106067
chr20	18220113	18220512	18220312	ENSG00000232943.1	+	processed_pseudogene	KNOWN	RP4-717M23.2	1	1	0.172162
chr20	18258554	18258851	18258702	ENSG00000266720.2	-	misc_RNA	KNOWN	RN7SL14P	1	1	-0.008702
chr20	18265690	18265879	18265784	ENSG00000252635.1	-	snRNA	KNOWN	RNU2-56P	1	1	-0.008702
chr20	18288283	18316996	18302639	ENSG00000125846.15	+	protein_coding	KNOWN	ZNF133	15	7	0.112643
chr20	18295143	18295451	18295297	ENSG00000199719.1	-	misc_RNA	KNOWN	RN7SKP74	1	1	0.107340
chr20	18313765	18315111	18314438	ENSG00000237259.1	-	antisense	KNOWN	RP4-568F9.3	1	2	0.177383
chr20	18322552	18359300	18340926	ENSG00000230010.1	-	lincRNA	KNOWN	RP4-568F9.6	2	5	-0.035879
chr20	18379049	18381484	18380266	ENSG00000237282.3	+	antisense	KNOWN	LINC00851	2	2	0.119299
chr20	18383367	18467281	18425324	ENSG00000089091.16	-	protein_coding	KNOWN	DZANK1	11	22	0.007361
chr20	18420160	18421454	18420807	ENSG00000236474.1	-	processed_pseudogene	KNOWN	GCNT1P1	1	1	-0.150209
chr20	18433842	18433944	18433893	ENSG00000252422.1	+	rRNA	KNOWN	RNA5SP476	1	1	0.132864
chr20	18467127	18484643	18475885	ENSG00000132664.11	+	protein_coding	KNOWN	POLR3F	6	9	0.330747
chr20	18470604	18470715	18470659	ENSG00000265137.2	+	miRNA	NOVEL	AL121893.2	1	1	0.404701
chr20	18485265	18486052	18485658	ENSG00000225419.1	+	processed_pseudogene	KNOWN	RPL21P3	1	2	0.404701
chr20	18486540	18497243	18491891	ENSG00000089050.14	-	protein_coding	KNOWN	RBBP9	4	6	0.120691
chr20	18504633	18505066	18504849	ENSG00000214612.3	+	processed_pseudogene	KNOWN	RPS19P1	1	1	-0.014923
chr20	18507493	18561415	18534454	ENSG00000101310.14	+	protein_coding	KNOWN	SEC23B	8	20	0.312495
chr20	18545708	18545784	18545746	ENSG00000264134.1	-	miRNA	NOVEL	AL121893.1	1	1	0.272564
chr20	18567347	18569563	18568455	ENSG00000232388.4	+	protein_coding	KNOWN	LINC00493	3	2	0.364451
chr20	18567453	18763917	18665685	ENSG00000125821.11	+	protein_coding	KNOWN	DTD1	3	6	0.124821
chr20	18592330	18592619	18592474	ENSG00000243702.3	+	misc_RNA	KNOWN	RN7SL638P	1	1	0.016704
chr20	18611047	18611167	18611107	ENSG00000221806.1	-	snRNA	KNOWN	RNU6ATAC34P	1	1	-0.066706
chr20	18642782	18643634	18643208	ENSG00000232136.2	-	processed_pseudogene	KNOWN	DUXAP7	1	2	0.224299
chr20	18674395	18698709	18686552	ENSG00000233993.1	-	antisense	KNOWN	RP11-379J5.5	1	4	0.052910
chr20	18782424	18783690	18783057	ENSG00000233324.1	-	processed_pseudogene	KNOWN	EEF1A1P34	1	1	-0.224341
chr20	18786065	18794335	18790200	ENSG00000179935.9	-	lincRNA	KNOWN	LINC00652	3	5	-0.079916
chr20	18794529	18796067	18795298	ENSG00000273148.1	+	lincRNA	KNOWN	RP5-1068E13.7	1	1	0.051120
chr20	18809728	18830153	18819940	ENSG00000149443.7	-	sense_overlapping	KNOWN	C20orf78	2	3	-0.155439
chr20	18813726	18814392	18814059	ENSG00000132631.5	+	protein_coding	KNOWN	SCP2D1	1	1	-0.160929
chr20	19000709	19056796	19028752	ENSG00000274863.1	-	lincRNA	KNOWN	RP11-97N19.3	1	6	0.016564
chr20	19125785	19125907	19125846	ENSG00000264669.1	+	miRNA	NOVEL	AL136090.1	1	1	-0.085651
chr20	19212646	19722937	19467791	ENSG00000185052.11	+	protein_coding	KNOWN	SLC24A3	2	18	-0.035396
chr20	19212852	19213477	19213164	ENSG00000235996.1	-	antisense	KNOWN	RP11-97N19.2	1	2	-0.110501
chr20	19242302	19284596	19263449	ENSG00000179447.2	-	antisense	KNOWN	RP5-1027G4.3	1	8	0.107806
chr20	19590097	19590187	19590142	ENSG00000216017.2	-	miRNA	NOVEL	AL139429.1	1	1	0.301220
chr20	19693209	19697576	19695392	ENSG00000232675.7	-	processed_transcript	KNOWN	RP4-718D20.3	8	4	0.006262
chr20	19734816	19734909	19734862	ENSG00000239120.1	-	miRNA	NOVEL	AL121761.1	1	1	0.471840
chr20	19756390	19758037	19757213	ENSG00000268628.2	-	lincRNA	KNOWN	RP1-122P22.4	1	1	0.363294
chr20	19757708	19809675	19783691	ENSG00000233895.1	+	lincRNA	KNOWN	RP1-122P22.2	3	3	0.483845
chr20	19823443	19823943	19823693	ENSG00000236992.2	-	processed_pseudogene	KNOWN	RPL12P12	1	1	0.438795
chr20	19871891	19872284	19872087	ENSG00000275142.1	+	lincRNA	KNOWN	RP5-999L4.2	1	1	0.646960
chr20	19886521	20002457	19944489	ENSG00000132669.12	+	protein_coding	KNOWN	RIN2	7	12	0.473952
chr20	20017116	20033655	20025385	ENSG00000173418.11	+	protein_coding	KNOWN	NAA20	7	7	0.319443
chr20	20034368	20056046	20045207	ENSG00000101343.14	-	protein_coding	KNOWN	CRNKL1	7	15	-0.145631
chr20	20052514	20360702	20206608	ENSG00000089101.17	+	protein_coding	KNOWN	CFAP61	21	27	-0.153484
chr20	20094401	20095684	20095042	ENSG00000241054.1	-	antisense	KNOWN	RP5-1002M8.4	1	2	-0.125239
chr20	20214299	20215262	20214780	ENSG00000225417.1	-	antisense	KNOWN	RP5-1178H5.2	1	2	-0.011386
chr20	20253303	20253838	20253570	ENSG00000229500.1	-	processed_pseudogene	KNOWN	RPL17P1	1	1	0.005483
chr20	20258407	20267809	20263108	ENSG00000243810.1	-	antisense	KNOWN	RP5-1096J16.1	1	3	0.005483
chr20	20316755	20316994	20316874	ENSG00000264879.2	+	misc_RNA	KNOWN	RN7SL690P	1	1	-0.027969
chr20	20363691	20365657	20364674	ENSG00000280229.1	+	TEC	KNOWN	RP11-470C13.4	1	1	0.120847
chr20	20368121	20370949	20369535	ENSG00000173404.4	+	protein_coding	KNOWN	INSM1	1	1	0.147275
chr20	20389552	20712488	20551020	ENSG00000188559.13	-	protein_coding	KNOWN	RALGAPA2	6	40	-0.076458
chr20	20659710	20659964	20659837	ENSG00000213384.2	+	processed_pseudogene	KNOWN	EIF4E2P1	1	1	-0.011386
chr20	20721187	20721879	20721533	ENSG00000270793.1	+	processed_pseudogene	KNOWN	LLPHP1	1	2	-0.063078
chr20	20738433	20738731	20738582	ENSG00000278525.1	-	misc_RNA	KNOWN	RN7SL607P	1	1	-0.244604
chr20	20854121	20854642	20854381	ENSG00000225803.1	-	processed_pseudogene	KNOWN	MRPS11P1	1	1	0.272564
chr20	20970448	20972562	20971505	ENSG00000234104.1	+	lincRNA	KNOWN	RP5-1177M21.1	1	2	-0.059172
chr20	21087604	21106358	21096981	ENSG00000225127.2	-	lincRNA	KNOWN	LINC00237	3	3	-0.118483
chr20	21114723	21115197	21114960	ENSG00000235065.1	+	processed_pseudogene	KNOWN	RPL24P2	1	1	0.162381
chr20	21125983	21246622	21186302	ENSG00000088970.15	+	protein_coding	KNOWN	KIZ	15	13	0.075438
chr20	21138956	21139074	21139015	ENSG00000199509.1	-	rRNA	KNOWN	RNA5SP477	1	1	0.035408
chr20	21148741	21162890	21155815	ENSG00000228604.3	-	antisense	KNOWN	RP5-872K7.7	2	6	0.039447
chr20	21154023	21218289	21186156	ENSG00000232712.6	-	antisense	KNOWN	KIZ-AS1	3	8	0.159729
chr20	21166206	21166596	21166401	ENSG00000214535.3	-	processed_pseudogene	KNOWN	RPS15AP1	1	1	0.039841
chr20	21265854	21266465	21266159	ENSG00000226875.1	+	unprocessed_pseudogene	KNOWN	ZNF877P	1	1	0.336530
chr20	21302731	21303704	21303217	ENSG00000275457.1	-	antisense	KNOWN	RP1-198K11.5	1	1	-0.182868
chr20	21303304	21389827	21346565	ENSG00000088930.7	+	protein_coding	KNOWN	XRN2	1	30	0.039736
chr20	21395367	21398028	21396697	ENSG00000125816.4	-	protein_coding	KNOWN	NKX2-4	1	2	-0.149826
chr20	21397818	21400391	21399104	ENSG00000225280.6	+	antisense	KNOWN	RP11-227D2.3	2	3	-0.149826
chr20	21424758	21425041	21424899	ENSG00000223128.1	-	misc_RNA	KNOWN	RN7SKP140	1	1	-0.128917
chr20	21488244	21488625	21488434	ENSG00000226405.1	-	processed_pseudogene	KNOWN	RP5-984P4.1	1	1	-0.195811
chr20	21499261	21502934	21501097	ENSG00000278041.1	-	lincRNA	KNOWN	RP5-984P4.6	1	1	-0.284978
chr20	21501395	21501968	21501681	ENSG00000227693.1	+	processed_pseudogene	KNOWN	GSTM3P1	1	1	-0.284978
chr20	21511010	21514026	21512518	ENSG00000125820.5	-	protein_coding	KNOWN	NKX2-2	1	2	0.692189
chr20	21511447	21512309	21511878	ENSG00000258197.1	+	antisense	KNOWN	NKX2-2-AS1	1	2	0.692189
chr20	21530202	21530744	21530473	ENSG00000233492.1	+	lincRNA	KNOWN	RP5-984P4.4	1	2	-0.140669
chr20	21569976	21619674	21594825	ENSG00000279082.3	+	lincRNA	KNOWN	RP1-167O22.1	4	4	-0.229526
chr20	21610787	21703585	21657186	ENSG00000280350.1	-	lincRNA	KNOWN	RP5-1065O2.4	1	5	-0.199647
chr20	21614978	21615435	21615206	ENSG00000278410.1	+	misc_RNA	NOVEL	Nkx2-2as	1	1	-0.025246
chr20	21705659	21718486	21712072	ENSG00000125813.13	+	protein_coding	KNOWN	PAX1	5	5	0.270940
chr20	21742303	21743077	21742690	ENSG00000233015.1	-	processed_pseudogene	KNOWN	SLC25A6P1	1	1	-0.390609
chr20	21755270	21755350	21755310	ENSG00000227063.5	+	processed_pseudogene	KNOWN	RPL41P1	1	1	-0.229936
chr20	21947647	21970783	21959215	ENSG00000238034.1	+	lincRNA	KNOWN	RP5-1185K9.1	1	2	-0.406575
chr20	22054090	22074654	22064372	ENSG00000234435.2	+	lincRNA	KNOWN	LINC01432	1	4	-0.351401
chr20	22220554	22223283	22221918	ENSG00000234862.1	+	lincRNA	KNOWN	RP5-1097P24.1	1	3	-0.579127
chr20	22263065	22284029	22273547	ENSG00000225321.2	-	lincRNA	KNOWN	LINC01427	4	5	-0.173037
chr20	22272052	22273454	22272753	ENSG00000225170.2	-	processed_pseudogene	KNOWN	RP5-828K20.1	1	1	-0.203784
chr20	22343693	22343930	22343811	ENSG00000270838.1	-	processed_pseudogene	KNOWN	RP5-1004I9.2	1	1	-0.053686
chr20	22371216	22471557	22421386	ENSG00000204684.3	-	lincRNA	KNOWN	RP5-1004I9.1	5	7	-0.281951
chr20	22547671	22578642	22563156	ENSG00000259974.2	-	lincRNA	KNOWN	LINC00261	3	4	-0.345979
chr20	22581005	22585455	22583230	ENSG00000125798.14	-	protein_coding	KNOWN	FOXA2	2	3	-0.158816
chr20	22587522	22607517	22597519	ENSG00000237396.1	-	lincRNA	KNOWN	LINC01384	1	3	0.007127
chr20	22668484	22685344	22676914	ENSG00000230400.2	-	lincRNA	KNOWN	RP11-359G22.2	3	3	-0.075246
chr20	22685391	22746107	22715749	ENSG00000283072.1	+	lincRNA	KNOWN	RP11-359G22.4	3	7	0.113076
chr20	22732802	22734089	22733445	ENSG00000215553.3	-	processed_pseudogene	KNOWN	KRT18P3	1	1	-0.022829
chr20	22733210	22733301	22733255	ENSG00000265151.1	-	miRNA	NOVEL	AL158175.1	1	1	-0.022829
chr20	22885670	22886068	22885869	ENSG00000213882.2	-	processed_pseudogene	KNOWN	CYB5P4	1	1	-0.063463
chr20	22960534	22966063	22963298	ENSG00000228935.1	-	processed_pseudogene	KNOWN	RP11-189G24.2	1	4	-0.083986
chr20	23010209	23030785	23020497	ENSG00000230492.1	-	antisense	KNOWN	RP4-753D10.5	1	4	0.218818
chr20	23031542	23039236	23035389	ENSG00000234646.5	+	sense_overlapping	KNOWN	RP4-753D10.3	2	3	-0.105948
chr20	23035386	23036812	23036099	ENSG00000132671.5	+	protein_coding	KNOWN	SSTR4	1	1	-0.105948
chr20	23045633	23049741	23047687	ENSG00000178726.6	-	protein_coding	KNOWN	THBD	1	1	-0.105948
chr20	23071547	23072722	23072134	ENSG00000279447.1	-	TEC	KNOWN	RP4-737E23.6	1	1	-0.086546
chr20	23079349	23086340	23082844	ENSG00000125810.9	-	protein_coding	KNOWN	CD93	1	2	-0.086546
chr20	23125068	23132621	23128844	ENSG00000233746.1	-	lincRNA	KNOWN	LINC00656	1	4	0.194270
chr20	23148086	23149939	23149012	ENSG00000279164.1	+	TEC	KNOWN	RP4-737E23.5	1	1	-0.065549
chr20	23160857	23160971	23160914	ENSG00000201527.1	-	rRNA	KNOWN	RNA5SP478	1	1	0.474789
chr20	23180176	23187544	23183860	ENSG00000275179.1	+	lincRNA	KNOWN	RP4-737E23.7	1	4	0.377613
chr20	23187961	23190307	23189134	ENSG00000230387.2	+	lincRNA	KNOWN	RP4-737E23.2	2	2	0.322345
chr20	23320958	23325352	23323155	ENSG00000277901.1	-	lincRNA	KNOWN	RP5-851M4.1	1	4	0.058203
chr20	23346941	23351486	23349213	ENSG00000234832.1	-	antisense	KNOWN	RP3-322G13.7	1	2	0.376458
chr20	23350736	23354777	23352756	ENSG00000132661.3	+	protein_coding	KNOWN	NXT1	1	2	0.412392
chr20	23356594	23358116	23357355	ENSG00000232645.5	-	lincRNA	KNOWN	LINC01431	3	3	0.412392
chr20	23362182	23373063	23367622	ENSG00000125812.15	+	protein_coding	KNOWN	GZF1	5	6	0.336718
chr20	23374519	23421519	23398019	ENSG00000125814.17	-	protein_coding	KNOWN	NAPB	7	11	0.220814
chr20	23380896	23381012	23380954	ENSG00000201728.1	-	rRNA	KNOWN	RNA5SP479	1	1	0.143654
chr20	23439685	23444930	23442307	ENSG00000125823.12	+	protein_coding	KNOWN	CSTL1	5	4	0.224299
chr20	23450403	23452857	23451630	ENSG00000125831.9	-	protein_coding	KNOWN	CST11	2	3	0.242614
chr20	23457584	23457685	23457634	ENSG00000200208.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.242614
chr20	23458529	23459459	23458994	ENSG00000273838.1	+	lincRNA	KNOWN	RP3-333B15.5	1	2	0.242614
chr20	23475700	23479798	23477749	ENSG00000226344.1	+	unitary_pseudogene	KNOWN	CST12P	1	3	-0.039253
chr20	23481645	23519054	23500349	ENSG00000260202.2	-	lincRNA	KNOWN	RP3-333B15.4	2	2	-0.013645
chr20	23489416	23489973	23489694	ENSG00000276638.1	-	lincRNA	KNOWN	RP3-333B15.6	1	1	-0.039253
chr20	23491101	23496018	23493559	ENSG00000125815.8	+	protein_coding	KNOWN	CST8	2	4	-0.149016
chr20	23519146	23542018	23530582	ENSG00000204663.9	+	transcribed_unprocessed_pseudogene	KNOWN	CST13P	3	4	0.091924
chr20	23547764	23550652	23549208	ENSG00000204662.2	-	unprocessed_pseudogene	KNOWN	CST9LP1	1	3	-0.087520
chr20	23564732	23568749	23566740	ENSG00000101435.4	-	protein_coding	KNOWN	CST9L	1	3	-0.030865
chr20	23583645	23586510	23585077	ENSG00000204658.5	+	unprocessed_pseudogene	KNOWN	CST9LP2	1	3	0.073613
chr20	23602410	23605876	23604143	ENSG00000173335.4	-	protein_coding	KNOWN	CST9	1	2	-0.336592
chr20	23626706	23638473	23632589	ENSG00000101439.8	-	protein_coding	KNOWN	CST3	3	4	0.401762
chr20	23631826	23632316	23632071	ENSG00000270001.1	-	lincRNA	KNOWN	RP11-218C14.8	1	1	0.460714
chr20	23655225	23656390	23655807	ENSG00000225056.1	-	lincRNA	KNOWN	RP11-218C14.5	1	2	0.209828
chr20	23685640	23689040	23687340	ENSG00000101441.4	-	protein_coding	KNOWN	CST4	1	3	-0.024732
chr20	23711320	23711406	23711363	ENSG00000232595.1	-	unprocessed_pseudogene	KNOWN	CST2P1	1	1	-0.080588
chr20	23747553	23751268	23749410	ENSG00000170373.8	-	protein_coding	KNOWN	CST1	2	4	0.156077
chr20	23772785	23776169	23774477	ENSG00000277975.1	-	unprocessed_pseudogene	KNOWN	CSTP2	1	3	-0.085201
chr20	23798141	23805663	23801902	ENSG00000230908.1	+	antisense	KNOWN	XXyac-YX60D10.1	1	4	-0.279518
chr20	23823769	23826731	23825250	ENSG00000170369.3	-	protein_coding	KNOWN	CST2	1	3	-0.131841
chr20	23875935	23879750	23877842	ENSG00000170367.4	-	protein_coding	KNOWN	CST5	1	3	-0.161041
chr20	23918771	23922169	23920470	ENSG00000228476.1	-	unprocessed_pseudogene	KNOWN	CSTP1	1	3	-0.020666
chr20	23980585	23980734	23980659	ENSG00000236168.1	-	unprocessed_pseudogene	KNOWN	RP5-831C21.1	1	1	0.003058
chr20	23985050	23988779	23986914	ENSG00000149435.12	-	protein_coding	KNOWN	GGTLC1	3	6	0.003058
chr20	23989292	23990454	23989873	ENSG00000167390.8	+	processed_pseudogene	KNOWN	POM121L3P	1	1	0.153779
chr20	24142590	24144386	24143488	ENSG00000236151.1	-	lincRNA	KNOWN	RP5-1100I6.1	1	2	0.084130
chr20	24199767	24224588	24212177	ENSG00000230133.1	+	lincRNA	KNOWN	FLJ33581	1	4	-0.155404
chr20	24237255	24237398	24237326	ENSG00000200231.1	+	snRNA	KNOWN	RNU1-23P	1	1	-0.379314
chr20	24297585	24318086	24307835	ENSG00000232200.2	-	lincRNA	KNOWN	RP4-564O4.1	1	5	-0.149837
chr20	24445391	24446314	24445852	ENSG00000234069.1	+	processed_pseudogene	KNOWN	GAPDHP53	1	1	0.109270
chr20	24469199	24666616	24567907	ENSG00000101463.5	+	protein_coding	KNOWN	SYNDIG1	2	4	0.094557
chr20	24491472	24502345	24496908	ENSG00000228539.1	-	antisense	KNOWN	RP11-526K17.2	1	3	-0.025365
chr20	24679547	24680991	24680269	ENSG00000231015.1	+	lincRNA	KNOWN	RP5-860P4.2	1	2	0.679470
chr20	24931840	24932983	24932411	ENSG00000274173.1	+	lincRNA	KNOWN	RP4-568C11.4	1	1	0.336096
chr20	24949230	24959928	24954579	ENSG00000077984.5	+	protein_coding	KNOWN	CST7	1	4	0.480804
chr20	24962925	24992979	24977952	ENSG00000101474.11	-	protein_coding	KNOWN	APMAP	2	10	0.337333
chr20	24974171	24974280	24974225	ENSG00000207355.1	+	snRNA	KNOWN	RNU6-1257P	1	1	0.279807
chr20	25006230	25058980	25032605	ENSG00000154930.14	-	protein_coding	KNOWN	ACSS1	5	14	0.581559
chr20	25062962	25063591	25063276	ENSG00000275358.1	-	lincRNA	KNOWN	RP5-1025A1.3	1	1	0.588101
chr20	25070885	25082365	25076625	ENSG00000100987.14	-	protein_coding	KNOWN	VSX1	7	6	0.380822
chr20	25099105	25099928	25099516	ENSG00000225069.3	+	processed_pseudogene	KNOWN	RP5-1025A1.2	1	1	0.319884
chr20	25140789	25149258	25145023	ENSG00000230725.5	-	lincRNA	KNOWN	RP4-738P15.1	4	4	0.251648
chr20	25161167	25162061	25161614	ENSG00000225344.1	-	processed_pseudogene	KNOWN	RP4-738P15.4	1	1	0.474789
chr20	25195693	25226729	25211211	ENSG00000197586.12	+	protein_coding	KNOWN	ENTPD6	18	15	0.299044
chr20	25214698	25214798	25214748	ENSG00000202414.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.382829
chr20	25226448	25226735	25226591	ENSG00000279322.1	-	TEC	KNOWN	RP4-738P15.6	1	1	0.382829
chr20	25229150	25231933	25230541	ENSG00000277938.1	+	lincRNA	KNOWN	RP5-965G21.3	1	1	0.717340
chr20	25239007	25245229	25242118	ENSG00000274414.1	-	lincRNA	KNOWN	RP5-965G21.4	1	2	0.864186
chr20	25248069	25298014	25273041	ENSG00000100994.11	+	protein_coding	KNOWN	PYGB	3	20	0.589490
chr20	25251008	25251304	25251156	ENSG00000274507.1	-	antisense	KNOWN	RP5-965G21.5	1	1	0.514934
chr20	25284915	25285588	25285251	ENSG00000276952.1	-	antisense	KNOWN	RP5-965G21.6	1	1	0.552181
chr20	25294743	25390983	25342863	ENSG00000100997.18	-	protein_coding	KNOWN	ABHD12	9	13	0.583916
chr20	25368275	25368766	25368520	ENSG00000227379.2	-	processed_pseudogene	KNOWN	PPIAP2	1	1	0.597227
chr20	25407727	25452628	25430177	ENSG00000101003.9	+	protein_coding	KNOWN	GINS1	4	7	0.197577
chr20	25452705	25585517	25519111	ENSG00000101004.14	-	protein_coding	KNOWN	NINL	7	24	0.521898
chr20	25611153	25611223	25611188	ENSG00000251883.1	+	snRNA	KNOWN	RNU6ATAC17P	1	1	0.235356
chr20	25612935	25624175	25618555	ENSG00000170191.4	-	protein_coding	KNOWN	NANP	1	2	0.235356
chr20	25624045	25678074	25651059	ENSG00000213742.6	+	antisense	KNOWN	ZNF337-AS1	6	6	0.083875
chr20	25654595	25654881	25654738	ENSG00000242236.2	-	misc_RNA	KNOWN	RN7SL594P	1	1	-0.179310
chr20	25669857	25670386	25670121	ENSG00000236542.1	-	processed_pseudogene	KNOWN	MED28P7	1	1	-0.035817
chr20	25674215	25696841	25685528	ENSG00000130684.13	-	protein_coding	KNOWN	ZNF337	3	5	0.059508
chr20	25680781	25681246	25681013	ENSG00000278383.1	+	antisense	KNOWN	RP4-694B14.8	1	1	0.016834
chr20	25734264	25735093	25734678	ENSG00000230772.1	+	unprocessed_pseudogene	KNOWN	VN1R108P	1	1	-0.052398
chr20	25751218	25752761	25751989	ENSG00000226465.1	+	antisense	KNOWN	RP13-401N8.1	1	2	0.003636
chr20	25763466	25868225	25815845	ENSG00000175170.14	-	protein_coding	KNOWN	FAM182B	9	7	0.145783
chr20	25783553	25783919	25783736	ENSG00000275048.1	+	processed_pseudogene	KNOWN	BSNDP1	1	1	0.161743
chr20	25835985	25836832	25836408	ENSG00000250090.1	-	unprocessed_pseudogene	KNOWN	RP13-401N8.3	1	2	0.124906
chr20	25845497	25845862	25845679	ENSG00000274973.1	+	processed_pseudogene	KNOWN	BSNDP2	1	1	0.124906
chr20	25919499	25919681	25919590	ENSG00000228593.1	-	unprocessed_pseudogene	KNOWN	CFTRP1	1	1	-0.473071
chr20	25955812	25969288	25962550	ENSG00000226203.1	+	lincRNA	KNOWN	RP4-760C5.5	1	4	-0.393435
chr20	26008791	26010531	26009661	ENSG00000231081.1	-	lincRNA	KNOWN	RP4-760C5.3	1	2	0.307904
chr20	26018832	26020684	26019758	ENSG00000204556.4	+	unprocessed_pseudogene	KNOWN	CTD-2514C3.1	1	4	0.358385
chr20	26054655	26086917	26070786	ENSG00000125804.13	+	processed_transcript	KNOWN	FAM182A	5	5	0.096299
chr20	26071988	26072351	26072169	ENSG00000277508.1	-	processed_pseudogene	KNOWN	BSNDP3	1	1	0.197174
chr20	26103416	26114028	26108722	ENSG00000240108.1	-	transcribed_unprocessed_pseudogene	KNOWN	NCOR1P1	2	2	-0.046945
chr20	26132887	26134198	26133542	ENSG00000230440.1	-	lincRNA	KNOWN	RP13-329D4.3	1	2	-0.481743
chr20	26186920	26251526	26219223	ENSG00000227195.8	-	processed_transcript	KNOWN	MIR663AHG	37	7	-0.486350
chr20	26188408	26196891	26192649	ENSG00000238129.5	+	lincRNA	KNOWN	RP3-410C9.2	2	3	-0.558702
chr20	26208186	26208278	26208232	ENSG00000273684.1	-	miRNA	KNOWN	MIR663A	1	1	-0.550246
chr20	28580709	28602664	28591686	ENSG00000282826.1	-	unprocessed_pseudogene	KNOWN	FRG1CP	1	9	-0.398581
chr20	29080390	29102761	29091575	ENSG00000282870.1	+	unprocessed_pseudogene	KNOWN	FRG1DP	1	9	-0.602882
chr20	29318824	29319579	29319201	ENSG00000283069.1	+	unprocessed_pseudogene	KNOWN	DUX4L32	1	1	-0.080611
chr20	29321310	29321666	29321488	ENSG00000282949.1	-	unprocessed_pseudogene	KNOWN	PCMTD1P7	1	1	-0.080611
chr20	29324092	29325049	29324570	ENSG00000282894.1	+	unprocessed_pseudogene	KNOWN	DUX4L33	1	1	-0.080611
chr20	29410348	29411600	29410974	ENSG00000282935.1	-	unprocessed_pseudogene	KNOWN	DUX4L34	1	1	-0.119691
chr20	29415264	29416911	29416087	ENSG00000282842.1	-	unprocessed_pseudogene	KNOWN	FRG2EP	1	4	-0.119691
chr20	29427400	29427883	29427641	ENSG00000283123.1	-	processed_pseudogene	KNOWN	RARRES2P11	1	1	-0.119691
chr20	29430723	29432913	29431818	ENSG00000282968.1	+	processed_pseudogene	KNOWN	AGGF1P10	1	1	-0.191968
chr20	29448517	29449306	29448911	ENSG00000282911.1	-	unprocessed_pseudogene	KNOWN	DUX4L35	1	1	-0.191968
chr20	29480147	29497179	29488663	ENSG00000282995.1	-	unprocessed_pseudogene	KNOWN	FRG1EP	1	9	-0.459414
chr20	29641778	29641976	29641877	ENSG00000282921.1	+	processed_pseudogene	KNOWN	CFTRP2	1	1	-0.715363
chr20	29746181	29748090	29747135	ENSG00000283005.1	+	processed_pseudogene	KNOWN	CDC27P3	1	1	-0.352372
chr20	29878636	29879363	29878999	ENSG00000283020.1	-	unprocessed_pseudogene	KNOWN	DUX4L37	1	1	0.075713
chr20	30214765	30214976	30214870	ENSG00000204555.3	-	processed_pseudogene	KNOWN	CFTRP3	1	1	-0.716643
chr20	30278906	30288479	30283692	ENSG00000205611.4	-	lincRNA	KNOWN	LINC01597	1	3	-0.225623
chr20	30309015	30309126	30309070	ENSG00000200325.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.220890
chr20	30323812	30361730	30342771	ENSG00000231934.1	-	antisense	KNOWN	LINC01598	2	4	-0.219039
chr20	30377372	30399257	30388314	ENSG00000149531.15	+	unprocessed_pseudogene	KNOWN	FRG1BP	1	9	-0.483310
chr20	30402486	30402624	30402555	ENSG00000221319.1	+	miRNA	NOVEL	AL441988.1	1	1	-0.388634
chr20	30403123	30403384	30403253	ENSG00000238151.1	-	processed_pseudogene	KNOWN	MLLT10P1	1	1	-0.388634
chr20	30484925	30485076	30485000	ENSG00000275877.1	-	rRNA	NOVEL	5_8S_rRNA	1	1	-0.155492
chr20	30488745	30488859	30488802	ENSG00000276990.1	-	miRNA	NOVEL	AC018688.1	1	1	-0.155492
chr20	30626926	30627002	30626964	ENSG00000275707.2	+	miRNA	NOVEL	AC092107.1	1	1	0.091992
chr20	30681825	30723932	30702878	ENSG00000277112.2	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-755J8.1	2	15	-0.511331
chr20	30713240	30713346	30713293	ENSG00000274385.1	-	snRNA	NOVEL	U6	1	1	-0.563018
chr20	30816156	30816274	30816215	ENSG00000275305.1	-	rRNA	NOVEL	5S_rRNA	1	1	-0.136894
chr20	30842322	30842404	30842363	ENSG00000276939.1	+	miRNA	NOVEL	AC104301.1	1	1	-0.496618
chr20	30901749	30901821	30901785	ENSG00000277204.1	-	miRNA	NOVEL	AC104301.2	1	1	-0.204140
chr20	31257664	31259632	31258648	ENSG00000215547.1	+	protein_coding	KNOWN	DEFB115	1	2	0.382310
chr20	31274170	31274867	31274518	ENSG00000215546.2	+	processed_pseudogene	KNOWN	DKKL1P1	1	1	-0.058342
chr20	31285317	31286835	31286076	ENSG00000224628.2	-	processed_pseudogene	KNOWN	RP5-854E16.2	1	1	-0.058342
chr20	31303212	31308585	31305898	ENSG00000215545.1	-	protein_coding	KNOWN	DEFB116	1	2	-0.188116
chr20	31311303	31311962	31311632	ENSG00000237929.1	-	processed_pseudogene	KNOWN	RPL31P3	1	2	-0.314633
chr20	31341371	31344471	31342921	ENSG00000236121.1	-	processed_pseudogene	KNOWN	HAUS6P2	1	4	0.013989
chr20	31356870	31356978	31356924	ENSG00000252649.1	+	rRNA	KNOWN	RNA5SP480	1	1	-0.267411
chr20	31360790	31360930	31360860	ENSG00000212717.3	+	processed_pseudogene	KNOWN	DEFB117	1	1	-0.267411
chr20	31368618	31373923	31371270	ENSG00000131068.3	+	protein_coding	KNOWN	DEFB118	1	2	-0.257331
chr20	31376319	31376446	31376382	ENSG00000212134.1	+	snoRNA	NOVEL	SNORA40	1	1	-0.253783
chr20	31377164	31390603	31383883	ENSG00000180483.6	-	protein_coding	KNOWN	DEFB119	4	4	-0.237893
chr20	31404845	31412838	31408841	ENSG00000204548.3	-	protein_coding	KNOWN	DEFB121	2	2	0.033533
chr20	31421436	31429180	31425308	ENSG00000204547.7	-	transcribed_unprocessed_pseudogene	KNOWN	DEFB122	2	3	-0.086714
chr20	31440519	31450257	31445388	ENSG00000180424.6	+	protein_coding	KNOWN	DEFB123	1	2	0.160816
chr20	31465506	31476757	31471131	ENSG00000180383.3	-	protein_coding	KNOWN	DEFB124	2	2	0.394517
chr20	31475293	31484905	31480099	ENSG00000088320.3	+	protein_coding	KNOWN	REM1	1	5	0.578869
chr20	31485778	31487574	31486676	ENSG00000233354.1	+	lincRNA	KNOWN	LINC00028	1	4	0.578869
chr20	31514428	31577923	31546175	ENSG00000101294.16	+	protein_coding	KNOWN	HM13	25	13	0.625068
chr20	31535263	31535626	31535444	ENSG00000274364.1	+	sense_intronic	KNOWN	RP3-324O17.7	1	1	0.479984
chr20	31547504	31548049	31547776	ENSG00000101898.5	+	processed_pseudogene	KNOWN	MCTS2P	1	1	0.479984
chr20	31563166	31564076	31563621	ENSG00000235313.1	+	sense_intronic	KNOWN	HM13-IT1	1	2	0.719018
chr20	31567707	31573263	31570485	ENSG00000230613.1	-	antisense	KNOWN	HM13-AS1	1	3	0.900732
chr20	31580890	31581214	31581052	ENSG00000278276.1	+	lincRNA	KNOWN	RP3-324O17.8	1	1	1.028333
chr20	31581089	31581192	31581140	ENSG00000201770.1	+	snRNA	KNOWN	RNU6-384P	1	1	1.028333
chr20	31605283	31606515	31605899	ENSG00000125968.8	+	protein_coding	KNOWN	ID1	2	2	0.974808
chr20	31607186	31607240	31607213	ENSG00000264395.1	+	miRNA	KNOWN	MIR3193	1	1	0.974808
chr20	31637888	31645006	31641447	ENSG00000131055.4	+	protein_coding	KNOWN	COX4I2	2	5	0.667494
chr20	31664452	31723989	31694220	ENSG00000171552.12	-	protein_coding	KNOWN	BCL2L1	9	3	0.537730
chr20	31686216	31716825	31701520	ENSG00000236559.1	+	antisense	KNOWN	RP11-243J16.7	1	2	0.411414
chr20	31721507	31723409	31722458	ENSG00000281376.1	+	antisense	KNOWN	ABALON	1	1	0.591224
chr20	31739271	31801805	31770538	ENSG00000088325.15	+	protein_coding	KNOWN	TPX2	2	19	0.404536
chr20	31808503	31808749	31808626	ENSG00000230801.1	-	processed_pseudogene	KNOWN	RP11-243J16.8	1	1	0.147640
chr20	31819308	31834689	31826998	ENSG00000101306.10	+	protein_coding	KNOWN	MYLK2	3	13	0.694410
chr20	31844301	31845619	31844960	ENSG00000179772.7	-	protein_coding	KNOWN	FOXS1	1	1	0.958441
chr20	31847637	31870747	31859192	ENSG00000149599.15	-	protein_coding	KNOWN	DUSP15	10	10	0.812007
chr20	31870702	31944963	31907832	ENSG00000131044.16	+	protein_coding	KNOWN	TTLL9	11	18	0.481392
chr20	31901254	31901426	31901340	ENSG00000199497.1	+	snRNA	KNOWN	RNU1-94P	1	1	0.467691
chr20	31944342	31952092	31948217	ENSG00000088356.5	-	protein_coding	KNOWN	PDRG1	1	5	0.552632
chr20	31968002	32003387	31985694	ENSG00000260903.2	+	protein_coding	KNOWN	XKR7	1	3	0.637004
chr20	31970181	31970831	31970506	ENSG00000278012.1	+	sense_intronic	KNOWN	RP1-310O13.13	1	1	0.665857
chr20	32008351	32008472	32008411	ENSG00000252623.1	+	rRNA	KNOWN	RNA5SP481	1	1	0.594492
chr20	32010450	32032180	32021315	ENSG00000101331.15	+	protein_coding	KNOWN	CCM2L	2	9	0.684563
chr20	32027753	32031575	32029664	ENSG00000226239.1	-	antisense	KNOWN	RP1-310O13.7	1	2	0.699481
chr20	32050588	32050705	32050646	ENSG00000212571.1	+	rRNA	KNOWN	RNA5SP482	1	1	0.520085
chr20	32052188	32101856	32077022	ENSG00000101336.12	+	protein_coding	KNOWN	HCK	10	14	0.470959
chr20	32109506	32167258	32138382	ENSG00000101337.15	+	protein_coding	KNOWN	TM9SF4	7	18	0.521515
chr20	32116171	32116629	32116400	ENSG00000275576.1	+	sense_intronic	KNOWN	RP5-836N17.4	1	1	0.448383
chr20	32118654	32118751	32118702	ENSG00000265736.1	-	miRNA	NOVEL	AL049539.1	1	1	0.448383
chr20	32170390	32170790	32170590	ENSG00000224452.1	-	processed_pseudogene	KNOWN	RSL24D1P6	1	1	0.545164
chr20	32186477	32190527	32188502	ENSG00000235217.6	-	transcribed_processed_pseudogene	KNOWN	TSPY26P	2	1	0.593236
chr20	32192503	32207791	32200147	ENSG00000126003.6	-	protein_coding	KNOWN	PLAGL2	1	3	0.913899
chr20	32207880	32238667	32223273	ENSG00000101346.11	+	protein_coding	KNOWN	POFUT1	5	7	0.578170
chr20	32237795	32237847	32237821	ENSG00000221667.1	+	miRNA	KNOWN	MIR1825	1	1	0.595424
chr20	32277664	32335011	32306337	ENSG00000101350.7	+	protein_coding	KNOWN	KIF3B	1	9	0.381568
chr20	32277700	32277788	32277744	ENSG00000264308.1	-	miRNA	NOVEL	AL121897.1	1	1	0.659032
chr20	32355053	32355734	32355393	ENSG00000277692.1	+	lincRNA	KNOWN	RP11-358N2.2	1	1	0.659467
chr20	32358344	32439319	32398831	ENSG00000171456.16	+	protein_coding	KNOWN	ASXL1	12	13	0.459559
chr20	32443059	32585074	32514066	ENSG00000197183.12	-	protein_coding	KNOWN	NOL4L	11	11	0.748349
chr20	32449755	32453607	32451681	ENSG00000236772.1	+	antisense	KNOWN	RP5-1184F4.5	1	4	1.059940
chr20	32509959	32520285	32515122	ENSG00000277301.1	+	antisense	KNOWN	RP5-1184F4.7	1	3	0.596509
chr20	32561093	32573888	32567490	ENSG00000233293.1	+	antisense	KNOWN	RP11-410N8.3	1	3	0.604874
chr20	32564992	32608893	32586942	ENSG00000204393.7	+	lincRNA	KNOWN	RP11-410N8.4	2	3	0.652138
chr20	32581963	32593900	32587931	ENSG00000228156.1	+	antisense	KNOWN	RP11-410N8.1	1	2	0.669888
chr20	32631652	32673941	32652796	ENSG00000198547.8	-	lincRNA	KNOWN	C20orf203	2	6	0.758105
chr20	32690180	32690815	32690497	ENSG00000175730.8	-	processed_pseudogene	KNOWN	BAK1P1	1	1	0.882538
chr20	32702691	32743997	32723344	ENSG00000149600.11	-	protein_coding	KNOWN	COMMD7	4	9	0.449407
chr20	32762385	32809356	32785870	ENSG00000088305.18	+	protein_coding	KNOWN	DNMT3B	6	23	0.541979
chr20	32819893	32850405	32835149	ENSG00000101367.8	+	protein_coding	KNOWN	MAPRE1	1	7	0.510506
chr20	32843128	32854257	32848692	ENSG00000260536.1	-	antisense	KNOWN	RP5-1085F17.4	1	2	0.533110
chr20	32856621	32858751	32857686	ENSG00000260257.2	+	lincRNA	KNOWN	RP5-1085F17.3	1	1	0.521980
chr20	32858923	32961609	32910266	ENSG00000215529.12	+	protein_coding	KNOWN	EFCAB8	4	27	0.289432
chr20	32983773	33004433	32994103	ENSG00000167098.11	-	protein_coding	KNOWN	SUN5	4	13	0.381679
chr20	33007600	33023709	33015654	ENSG00000078898.6	+	protein_coding	KNOWN	BPIFB2	1	16	0.605791
chr20	33031648	33044047	33037847	ENSG00000167104.11	+	protein_coding	KNOWN	BPIFB6	2	16	0.325089
chr20	33047517	33048152	33047834	ENSG00000214245.3	-	processed_pseudogene	KNOWN	PUDPP3	1	1	0.325089
chr20	33055424	33073628	33064526	ENSG00000186190.7	+	protein_coding	KNOWN	BPIFB3	1	15	0.517627
chr20	33057588	33057670	33057629	ENSG00000263856.1	-	miRNA	NOVEL	AL121756.1	1	1	0.511217
chr20	33079644	33111751	33095697	ENSG00000186191.7	+	protein_coding	KNOWN	BPIFB4	3	16	0.519780
chr20	33161768	33181412	33171590	ENSG00000131050.10	+	protein_coding	KNOWN	BPIFA2	2	9	0.172026
chr20	33187391	33188292	33187841	ENSG00000237662.1	+	processed_pseudogene	KNOWN	SOCS2P1	1	2	0.282514
chr20	33193585	33210462	33202023	ENSG00000183566.10	+	unitary_pseudogene	KNOWN	BPIFA4P	4	9	0.311728
chr20	33214920	33217067	33215993	ENSG00000224876.1	-	antisense	KNOWN	RP11-49G10.3	1	2	0.371609
chr20	33217310	33227758	33222534	ENSG00000131059.11	+	protein_coding	KNOWN	BPIFA3	4	7	0.371609
chr20	33235995	33243311	33239653	ENSG00000198183.11	+	protein_coding	KNOWN	BPIFA1	4	9	0.209124
chr20	33272262	33272657	33272459	ENSG00000233106.1	-	processed_pseudogene	KNOWN	RPL12P3	1	1	0.251300
chr20	33273480	33309878	33291679	ENSG00000125999.10	+	protein_coding	KNOWN	BPIFB1	3	16	0.328147
chr20	33316869	33329969	33323419	ENSG00000233146.1	+	unitary_pseudogene	KNOWN	BPIFB5P	1	10	0.690787
chr20	33347720	33354444	33351082	ENSG00000125997.5	+	transcribed_unprocessed_pseudogene	KNOWN	BPIFB9P	2	6	0.403030
chr20	33358839	33401561	33380200	ENSG00000101391.20	-	protein_coding	KNOWN	CDK5RAP1	16	15	0.472350
chr20	33407955	33443892	33425923	ENSG00000101400.5	-	protein_coding	KNOWN	SNTA1	1	8	0.692556
chr20	33490075	33650036	33570055	ENSG00000078699.21	+	protein_coding	KNOWN	CBFA2T2	10	13	0.408754
chr20	33655701	33656423	33656062	ENSG00000275223.1	-	lincRNA	KNOWN	RP1-63M2.7	1	1	0.722930
chr20	33657087	33674463	33665775	ENSG00000125967.16	-	protein_coding	KNOWN	NECAB3	22	13	0.808535
chr20	33662284	33665619	33663951	ENSG00000149609.5	+	protein_coding	KNOWN	C20orf144	2	2	0.722930
chr20	33666498	33668525	33667511	ENSG00000182584.4	+	protein_coding	KNOWN	ACTL10	1	1	0.722930
chr20	33674517	33675380	33674948	ENSG00000271803.1	+	antisense	KNOWN	RP1-63M2.5	1	2	1.056147
chr20	33675683	33686404	33681043	ENSG00000101412.12	-	protein_coding	KNOWN	E2F1	1	7	1.056147
chr20	33702754	33720319	33711536	ENSG00000101417.11	-	protein_coding	KNOWN	PXMP4	3	4	0.587041
chr20	33728931	33731828	33730379	ENSG00000229188.2	-	antisense	KNOWN	RP4-553F4.2	1	2	0.675043
chr20	33731657	33792269	33761963	ENSG00000131061.13	+	protein_coding	KNOWN	ZNF341	5	15	0.597937
chr20	33752167	33752543	33752355	ENSG00000230837.1	-	processed_pseudogene	KNOWN	RPL31P2	1	1	0.709442
chr20	33787373	33811097	33799235	ENSG00000230753.5	-	antisense	KNOWN	ZNF341-AS1	3	4	0.613169
chr20	33811304	33854366	33832835	ENSG00000101421.3	+	protein_coding	KNOWN	CHMP4B	1	5	0.599017
chr20	33912323	33913336	33912829	ENSG00000214200.2	-	processed_pseudogene	KNOWN	TPM3P2	1	2	0.676954
chr20	33965162	33965576	33965369	ENSG00000228958.1	+	processed_pseudogene	KNOWN	PIGPP3	1	1	0.507029
chr20	33983052	33994357	33988704	ENSG00000228265.5	-	lincRNA	KNOWN	RALY-AS1	3	3	0.436715
chr20	33985617	33988989	33987303	ENSG00000276073.1	-	lincRNA	KNOWN	RP5-1125A11.7	1	1	0.394978
chr20	33989480	33991818	33990649	ENSG00000275784.1	-	lincRNA	KNOWN	RP5-1125A11.6	1	2	0.479214
chr20	33993646	34108308	34050977	ENSG00000125970.11	+	protein_coding	KNOWN	RALY	10	10	0.459402
chr20	34014969	34017749	34016359	ENSG00000228386.2	-	lincRNA	KNOWN	RP5-1125A11.4	1	3	0.400114
chr20	34049119	34049190	34049154	ENSG00000264616.1	+	miRNA	KNOWN	MIR4755	1	1	0.282814
chr20	34088298	34112332	34100315	ENSG00000125977.6	-	protein_coding	KNOWN	EIF2S2	1	9	0.466410
chr20	34122470	34123290	34122880	ENSG00000225246.1	+	processed_pseudogene	KNOWN	RPS2P1	1	1	0.460714
chr20	34194569	34269344	34231956	ENSG00000101440.9	+	protein_coding	KNOWN	ASIP	2	4	0.289213
chr20	34213495	34215892	34214693	ENSG00000214185.3	-	processed_pseudogene	KNOWN	XPOTP1	1	1	0.260115
chr20	34234840	34281173	34258006	ENSG00000250917.1	-	sense_overlapping	KNOWN	RP4-785G19.5	1	3	0.359572
chr20	34245953	34246537	34246245	ENSG00000236456.1	-	processed_pseudogene	KNOWN	RP4-785G19.2	1	1	0.250140
chr20	34280268	34311802	34296035	ENSG00000101444.12	-	protein_coding	KNOWN	AHCY	6	10	0.906304
chr20	34281632	34286466	34284049	ENSG00000272945.1	-	sense_intronic	KNOWN	CTD-3216D2.5	1	2	0.812255
chr20	34347671	34347785	34347728	ENSG00000234087.1	-	processed_pseudogene	KNOWN	CTD-3216D2.4	1	1	0.307498
chr20	34363235	34511393	34437314	ENSG00000078747.12	+	protein_coding	KNOWN	ITCH	9	26	0.386356
chr20	34384165	34384265	34384215	ENSG00000201498.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.707760
chr20	34402149	34402696	34402422	ENSG00000234933.1	-	processed_pseudogene	KNOWN	CDC42P1	1	1	0.344912
chr20	34441592	34442025	34441808	ENSG00000236388.1	-	antisense	KNOWN	ITCH-AS1	1	2	0.205649
chr20	34450930	34454552	34452741	ENSG00000231795.1	+	sense_intronic	KNOWN	ITCH-IT1	1	2	0.516679
chr20	34466325	34466418	34466371	ENSG00000207997.1	+	miRNA	KNOWN	MIR644A	1	1	0.516679
chr20	34475924	34476474	34476199	ENSG00000181741.7	-	processed_pseudogene	KNOWN	FDX1P1	1	1	0.215374
chr20	34476205	34476787	34476496	ENSG00000277558.1	+	sense_intronic	KNOWN	RP3-468O1.6	1	1	0.215374
chr20	34516409	34540958	34528683	ENSG00000125971.16	+	protein_coding	KNOWN	DYNLRB1	4	5	0.735986
chr20	34526510	34526606	34526558	ENSG00000206582.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.781448
chr20	34546854	34560345	34553599	ENSG00000101460.12	+	protein_coding	KNOWN	MAP1LC3A	4	5	0.907637
chr20	34560542	34698790	34629666	ENSG00000101464.10	-	protein_coding	KNOWN	PIGU	6	12	0.581260
chr20	34654122	34654214	34654168	ENSG00000273561.1	-	miRNA	NOVEL	AL118520.1	1	1	0.605616
chr20	34688688	34688978	34688833	ENSG00000231034.1	+	processed_pseudogene	KNOWN	RP11-346K17.3	1	1	0.502368
chr20	34689097	34825649	34757373	ENSG00000198646.13	-	protein_coding	KNOWN	NCOA6	9	16	0.397762
chr20	34704290	34713439	34708864	ENSG00000078804.12	+	protein_coding	KNOWN	TP53INP2	4	5	0.460369
chr20	34833575	34834462	34834018	ENSG00000225336.2	-	processed_pseudogene	KNOWN	HMGB3P1	1	2	0.633627
chr20	34844720	34872860	34858790	ENSG00000131067.16	-	protein_coding	KNOWN	GGT7	4	15	0.732282
chr20	34872146	34927962	34900054	ENSG00000131069.19	+	protein_coding	KNOWN	ACSS2	24	19	0.612141
chr20	34928430	34955817	34942123	ENSG00000100983.9	-	protein_coding	KNOWN	GSS	2	13	0.890336
chr20	34975403	35002437	34988920	ENSG00000078814.15	+	protein_coding	KNOWN	MYH7B	9	43	1.058637
chr20	34990376	34990497	34990436	ENSG00000207635.1	+	miRNA	KNOWN	MIR499A	1	1	1.373690
chr20	35002404	35092871	35047637	ENSG00000100991.11	-	protein_coding	KNOWN	TRPC4AP	2	19	0.714471
chr20	35030317	35030420	35030368	ENSG00000202150.1	-	snRNA	KNOWN	RNU6-407P	1	1	0.562372
chr20	35115357	35147364	35131360	ENSG00000088298.12	-	protein_coding	KNOWN	EDEM2	2	11	0.529494
chr20	35117136	35117207	35117171	ENSG00000201151.1	-	snoRNA	NOVEL	SNORD56	1	1	0.570455
chr20	35172073	35216240	35194156	ENSG00000101000.5	+	protein_coding	KNOWN	PROCR	3	4	0.445531
chr20	35174355	35174919	35174637	ENSG00000278367.1	-	antisense	KNOWN	RP11-42O4.2	1	1	0.442807
chr20	35195306	35195423	35195364	ENSG00000200301.1	+	rRNA	KNOWN	RNA5SP483	1	1	0.417087
chr20	35201745	35278131	35239938	ENSG00000126005.16	-	protein_coding	KNOWN	MMP24-AS1	12	5	0.726635
chr20	35214589	35214689	35214639	ENSG00000264888.1	+	miRNA	NOVEL	AL121753.1	1	1	0.544504
chr20	35218009	35218185	35218097	ENSG00000229230.3	+	processed_pseudogene	KNOWN	MT1P3	1	1	0.544504
chr20	35226654	35277000	35251827	ENSG00000125966.9	+	protein_coding	KNOWN	MMP24	1	9	0.834684
chr20	35262727	35264187	35263457	ENSG00000279253.1	-	TEC	KNOWN	RP4-614O4.13	1	1	1.010081
chr20	35267885	35280043	35273964	ENSG00000261582.1	-	protein_coding	KNOWN	RP4-614O4.11	1	4	0.884408
chr20	35278907	35284985	35281946	ENSG00000242372.6	-	protein_coding	KNOWN	EIF6	9	7	0.857957
chr20	35285251	35285756	35285503	ENSG00000235214.1	+	antisense	KNOWN	FAM83C-AS1	1	2	0.857957
chr20	35285731	35292401	35289066	ENSG00000125998.7	-	protein_coding	KNOWN	FAM83C	1	4	0.910548
chr20	35302566	35412141	35357353	ENSG00000101019.21	-	protein_coding	KNOWN	UQCC1	23	10	0.590250
chr20	35433029	35435450	35434239	ENSG00000204183.1	+	protein_coding	KNOWN	GDF5OS	1	2	0.650579
chr20	35433347	35454746	35444046	ENSG00000125965.8	-	protein_coding	KNOWN	GDF5	2	4	0.630026
chr20	35453954	35454097	35454025	ENSG00000221763.1	-	miRNA	KNOWN	MIR1289-1	1	1	0.557930
chr20	35455164	35519280	35487222	ENSG00000126001.15	+	protein_coding	KNOWN	CEP250	14	35	0.762740
chr20	35476203	35490982	35483592	ENSG00000230155.6	-	antisense	KNOWN	RP3-477O4.14	3	3	0.911701
chr20	35520852	35528255	35524553	ENSG00000242507.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP3-477O4.5	3	8	0.929141
chr20	35523186	35529652	35526419	ENSG00000125975.13	-	protein_coding	KNOWN	C20orf173	4	6	0.929141
chr20	35542021	35557634	35549827	ENSG00000125991.18	+	protein_coding	KNOWN	ERGIC3	19	14	0.812991
chr20	35544430	35544747	35544588	ENSG00000224497.1	-	processed_pseudogene	KNOWN	RPL36P4	1	1	0.746217
chr20	35558737	35607562	35583149	ENSG00000088340.15	-	unitary_pseudogene	KNOWN	FER1L4	13	45	0.827709
chr20	35588324	35588607	35588465	ENSG00000227401.1	+	processed_pseudogene	KNOWN	RPL37P1	1	1	0.988723
chr20	35615892	35621049	35618470	ENSG00000061656.9	+	protein_coding	KNOWN	SPAG4	7	12	1.070099
chr20	35626031	35664956	35645493	ENSG00000214078.12	-	protein_coding	KNOWN	CPNE1	28	18	0.743258
chr20	35632340	35674544	35653442	ENSG00000272897.5	-	protein_coding	KNOWN	RP1-309K20.6	3	9	0.669310
chr20	35643143	35643462	35643302	ENSG00000222460.1	+	misc_RNA	KNOWN	RN7SKP271	1	1	0.804295
chr20	35647328	35647430	35647379	ENSG00000252549.1	-	snRNA	KNOWN	RNU6-759P	1	1	0.804295
chr20	35648925	35664956	35656940	ENSG00000244462.7	-	protein_coding	KNOWN	RBM12	6	3	0.590299
chr20	35668055	35699359	35683707	ENSG00000244005.12	-	protein_coding	KNOWN	NFS1	14	13	0.668942
chr20	35699272	35700984	35700128	ENSG00000125995.15	+	protein_coding	KNOWN	ROMO1	5	3	0.920946
chr20	35703609	35742312	35722960	ENSG00000131051.21	-	protein_coding	KNOWN	RBM39	44	18	0.697248
chr20	35752814	35753719	35753266	ENSG00000225357.3	+	processed_pseudogene	KNOWN	RPF2P1	1	1	0.781291
chr20	35771974	35950381	35861177	ENSG00000025293.15	+	protein_coding	KNOWN	PHF20	17	18	0.535545
chr20	35850674	35850915	35850794	ENSG00000234274.1	-	processed_pseudogene	KNOWN	COX7BP2	1	1	0.523424
chr20	35853252	35853364	35853308	ENSG00000199676.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.523424
chr20	35878476	35878733	35878604	ENSG00000219608.3	+	processed_pseudogene	KNOWN	HIGD1AP16	1	1	0.530113
chr20	35887659	35887801	35887730	ENSG00000201221.1	+	snRNA	KNOWN	RNU4-40P	1	1	0.530113
chr20	35928570	35928675	35928622	ENSG00000207053.1	-	snRNA	KNOWN	RNU6-937P	1	1	0.846551
chr20	35953617	35959472	35956544	ENSG00000171222.10	-	protein_coding	KNOWN	SCAND1	3	3	0.391080
chr20	35954564	36030700	35992632	ENSG00000149646.12	+	protein_coding	KNOWN	CNBD2	7	12	0.329831
chr20	36045622	36050960	36048291	ENSG00000260032.1	-	lincRNA	KNOWN	LINC00657	1	1	0.297778
chr20	36064243	36064563	36064403	ENSG00000277235.1	-	lincRNA	KNOWN	RP4-550H1.7	1	1	0.483273
chr20	36072441	36085260	36078850	ENSG00000234139.2	+	lincRNA	KNOWN	RP4-550H1.4	2	3	0.708288
chr20	36076018	36076601	36076309	ENSG00000231470.1	-	processed_pseudogene	KNOWN	HMGB3P2	1	1	0.708288
chr20	36086252	36088192	36087222	ENSG00000237063.1	-	lincRNA	KNOWN	RP4-550H1.5	1	2	0.708288
chr20	36091504	36232799	36162151	ENSG00000088367.20	+	protein_coding	KNOWN	EPB41L1	18	23	0.708864
chr20	36148726	36155760	36152243	ENSG00000232406.6	-	antisense	KNOWN	RP11-234K24.3	2	4	0.802771
chr20	36233851	36234297	36234074	ENSG00000278035.1	+	lincRNA	KNOWN	RP11-234K24.6	1	1	0.472362
chr20	36236459	36270918	36253688	ENSG00000131043.11	+	protein_coding	KNOWN	AAR2	3	4	0.464682
chr20	36255716	36255820	36255768	ENSG00000281193.1	+	miRNA	NOVEL	AL121895.1	1	1	0.446341
chr20	36306336	36528637	36417486	ENSG00000080845.17	+	protein_coding	KNOWN	DLGAP4	16	13	0.660282
chr20	36507702	36573391	36540546	ENSG00000232907.7	-	antisense	KNOWN	DLGAP4-AS1	5	5	0.834858
chr20	36541484	36551447	36546465	ENSG00000101335.9	+	protein_coding	KNOWN	MYL9	2	4	0.688833
chr20	36561237	36561530	36561383	ENSG00000273986.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.172610
chr20	36573488	36593950	36583719	ENSG00000118707.9	+	protein_coding	KNOWN	TGIF2	8	3	0.779682
chr20	36574553	36612384	36593468	ENSG00000259399.1	+	protein_coding	KNOWN	TGIF2-C20orf24	1	5	0.827233
chr20	36605734	36612557	36609145	ENSG00000101084.16	+	protein_coding	KNOWN	C20orf24	7	5	0.886807
chr20	36612318	36646216	36629267	ENSG00000101082.13	-	protein_coding	KNOWN	SLA2	2	8	0.815523
chr20	36620403	36621423	36620913	ENSG00000227688.2	+	unprocessed_pseudogene	KNOWN	HNRNPA3P2	1	2	0.914283
chr20	36651766	36746078	36698922	ENSG00000101079.20	-	protein_coding	KNOWN	NDRG3	5	17	0.383993
chr20	36668559	36668670	36668614	ENSG00000202255.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.473500
chr20	36746056	36746130	36746093	ENSG00000265441.1	+	miRNA	NOVEL	AL132768.1	1	1	0.334126
chr20	36751791	36773818	36762804	ENSG00000149636.15	-	protein_coding	KNOWN	DSN1	10	12	0.637720
chr20	36777442	36863686	36820564	ENSG00000149639.14	-	protein_coding	KNOWN	SOGA1	4	15	0.731390
chr20	36870099	36870402	36870250	ENSG00000242509.3	+	misc_RNA	KNOWN	RN7SL156P	1	1	0.827259
chr20	36876121	36894235	36885178	ENSG00000101342.9	+	protein_coding	KNOWN	TLDC2	3	7	0.763305
chr20	36890229	36951843	36921036	ENSG00000101347.8	-	protein_coding	KNOWN	SAMHD1	2	16	0.340264
chr20	36996349	37095995	37046172	ENSG00000080839.11	-	protein_coding	KNOWN	RBL1	4	22	0.339960
chr20	37021743	37021984	37021863	ENSG00000231241.1	-	processed_pseudogene	KNOWN	RPS3AP3	1	1	0.465807
chr20	37049254	37049707	37049480	ENSG00000226144.2	+	processed_pseudogene	KNOWN	RPS27AP3	1	1	0.091992
chr20	37095785	37097178	37096481	ENSG00000269846.1	+	antisense	KNOWN	RP4-621N11.2	1	1	0.339085
chr20	37101226	37179588	37140407	ENSG00000101353.14	-	protein_coding	KNOWN	MROH8	8	25	0.391363
chr20	37165774	37166312	37166043	ENSG00000236159.1	-	processed_pseudogene	KNOWN	RP3-343K2.4	1	1	0.649987
chr20	37178410	37241623	37210016	ENSG00000118705.16	+	protein_coding	KNOWN	RPN2	8	17	0.300609
chr20	37251082	37261835	37256458	ENSG00000118702.9	-	protein_coding	KNOWN	GHRH	3	5	0.625729
chr20	37289638	37317260	37303449	ENSG00000101363.12	+	protein_coding	KNOWN	MANBAL	5	5	0.618499
chr20	37344685	37406050	37375367	ENSG00000197122.11	+	protein_coding	KNOWN	SRC	11	14	0.827742
chr20	37444733	37445534	37445133	ENSG00000213979.3	-	processed_pseudogene	KNOWN	RPL7AP14	1	1	0.716893
chr20	37492472	37527931	37510201	ENSG00000166619.12	-	protein_coding	KNOWN	BLCAP	14	4	0.398273
chr20	37521215	37523693	37522454	ENSG00000053438.8	+	protein_coding	KNOWN	NNAT	2	3	0.371276
chr20	37526642	37527060	37526851	ENSG00000276603.1	-	sense_intronic	KNOWN	RP11-425M5.7	1	1	0.371276
chr20	37530039	37530543	37530291	ENSG00000235044.1	+	processed_pseudogene	KNOWN	PPIAP3	1	1	0.726707
chr20	37571103	37583935	37577519	ENSG00000274469.1	+	lincRNA	KNOWN	RP11-425M5.8	1	4	0.621883
chr20	37602852	37603185	37603018	ENSG00000228234.1	-	processed_pseudogene	KNOWN	GLRXP	1	1	0.421782
chr20	37619298	37623119	37621208	ENSG00000225759.1	-	lincRNA	KNOWN	LINC00489	1	3	0.268611
chr20	37676910	37683234	37680072	ENSG00000204117.1	+	lincRNA	KNOWN	RP4-640H8.2	1	4	0.428683
chr20	37693955	37872129	37783042	ENSG00000132792.18	+	protein_coding	KNOWN	CTNNBL1	10	17	0.203999
chr20	37903104	37945350	37924227	ENSG00000132821.11	+	protein_coding	KNOWN	VSTM2L	3	4	0.591095
chr20	37975156	37975481	37975318	ENSG00000199683.1	-	misc_RNA	KNOWN	RN7SKP185	1	1	0.000249
chr20	37983007	38033468	38008237	ENSG00000101407.12	-	protein_coding	KNOWN	TTI1	6	9	0.119043
chr20	38033546	38127780	38080663	ENSG00000101413.11	+	protein_coding	KNOWN	RPRD1B	9	7	0.424998
chr20	38098414	38098700	38098557	ENSG00000264767.2	-	misc_RNA	KNOWN	RN7SL237P	1	1	0.593003
chr20	38103524	38104961	38104242	ENSG00000277550.1	-	lincRNA	KNOWN	RP5-1057B20.3	1	1	0.593003
chr20	38127387	38166578	38146982	ENSG00000198959.11	-	protein_coding	KNOWN	TGM2	6	13	0.820297
chr20	38210488	38260772	38235630	ENSG00000149633.11	-	protein_coding	KNOWN	KIAA1755	7	14	0.772448
chr20	38233251	38233799	38233525	ENSG00000277829.1	-	sense_intronic	KNOWN	RP5-1054A22.4	1	1	0.725699
chr20	38260149	38337505	38298827	ENSG00000101425.12	+	protein_coding	KNOWN	BPI	8	15	0.567728
chr20	38288331	38326536	38307433	ENSG00000206249.3	-	antisense	KNOWN	CTD-2308N23.2	1	3	0.584644
chr20	38339655	38339728	38339691	ENSG00000281466.1	-	miRNA	NOVEL	AL391095.1	1	1	0.471050
chr20	38346356	38377023	38361689	ENSG00000129988.5	+	protein_coding	KNOWN	LBP	1	15	0.503829
chr20	38378825	38383179	38381002	ENSG00000275285.1	+	lincRNA	KNOWN	RP4-564F22.6	1	2	0.517125
chr20	38406011	38416797	38411404	ENSG00000224635.1	-	lincRNA	KNOWN	RP4-564F22.5	1	2	0.401234
chr20	38418483	38419202	38418842	ENSG00000275401.1	-	lincRNA	KNOWN	RP4-564F22.7	1	1	0.433500
chr20	38420588	38435353	38427970	ENSG00000196756.11	-	processed_transcript	KNOWN	SNHG17	8	8	0.528267
chr20	38421647	38421774	38421710	ENSG00000277034.1	-	snoRNA	NOVEL	SNORA71	1	1	0.433500
chr20	38425083	38425354	38425218	ENSG00000235408.5	-	snoRNA	KNOWN	SNORA71B	2	1	0.433500
chr20	38427309	38427442	38427375	ENSG00000225091.3	-	snoRNA	KNOWN	SNORA71A	1	1	0.433500
chr20	38429670	38429803	38429736	ENSG00000201512.1	-	snoRNA	KNOWN	SNORA71C	1	1	0.433500
chr20	38433865	38433998	38433931	ENSG00000200354.1	-	snoRNA	KNOWN	SNORA71D	1	1	0.694844
chr20	38442036	38442169	38442102	ENSG00000201811.1	+	snoRNA	NOVEL	SNORA71	1	1	0.694844
chr20	38446578	38450921	38448749	ENSG00000174365.19	+	processed_transcript	KNOWN	SNHG11	15	6	0.635205
chr20	38448084	38448215	38448149	ENSG00000274309.1	+	snoRNA	KNOWN	SNORA71E	1	1	0.694844
chr20	38449370	38449503	38449436	ENSG00000199266.1	+	snoRNA	KNOWN	SNORA60	1	1	0.694844
chr20	38472816	38578861	38525838	ENSG00000170471.14	+	protein_coding	KNOWN	RALGAPB	9	30	0.210562
chr20	38516537	38516647	38516592	ENSG00000275453.1	+	miRNA	NOVEL	AL049868.1	1	1	0.210173
chr20	38537758	38538458	38538108	ENSG00000231307.1	+	processed_pseudogene	KNOWN	RPS3P2	1	1	0.229495
chr20	38581195	38588463	38584829	ENSG00000182035.11	+	protein_coding	KNOWN	ADIG	4	3	-0.160615
chr20	38598316	38598383	38598349	ENSG00000281747.1	+	miRNA	NOVEL	AL035419.1	1	1	0.429027
chr20	38601934	38651035	38626484	ENSG00000124143.10	+	protein_coding	KNOWN	ARHGAP40	4	15	0.406293
chr20	38614913	38615476	38615194	ENSG00000213959.2	-	processed_pseudogene	KNOWN	RP5-1100H13.3	1	1	0.507029
chr20	38711821	38712103	38711962	ENSG00000277965.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.340736
chr20	38724462	38729372	38726917	ENSG00000101438.3	+	protein_coding	KNOWN	SLC32A1	1	2	0.340736
chr20	38748442	38772520	38760481	ENSG00000101442.9	+	protein_coding	KNOWN	ACTR5	1	9	0.224865
chr20	38761528	38761842	38761685	ENSG00000199691.1	+	misc_RNA	KNOWN	RN7SKP173	1	1	0.183490
chr20	38805705	38923024	38864364	ENSG00000101445.9	+	protein_coding	KNOWN	PPP1R16B	4	11	0.248438
chr20	38872770	38873074	38872922	ENSG00000240474.3	+	misc_RNA	KNOWN	RN7SL116P	1	1	0.288531
chr20	38926312	38953106	38939709	ENSG00000101447.13	+	protein_coding	KNOWN	FAM83D	3	4	0.543357
chr20	38955910	38956547	38956228	ENSG00000274825.1	+	lincRNA	KNOWN	RP4-616B8.5	1	1	0.218169
chr20	38961925	38962111	38962018	ENSG00000261431.1	-	antisense	KNOWN	RP4-616B8.4	1	1	0.218169
chr20	38962299	39039723	39001011	ENSG00000101452.14	+	protein_coding	KNOWN	DHX35	7	22	0.193615
chr20	38962472	38962993	38962732	ENSG00000277581.1	+	sense_intronic	KNOWN	RP4-616B8.6	1	1	0.218169
chr20	38977711	38978422	38978066	ENSG00000223864.1	-	processed_pseudogene	KNOWN	NPM1P19	1	1	0.183622
chr20	39213777	39224748	39219262	ENSG00000230324.1	-	lincRNA	KNOWN	RP4-705O1.1	1	4	-0.332893
chr20	39271540	39271615	39271577	ENSG00000211534.2	+	miRNA	NOVEL	AL121588.1	1	1	0.387159
chr20	39329014	39329924	39329469	ENSG00000224357.1	-	processed_pseudogene	KNOWN	ATG3P1	1	1	-0.228049
chr20	39349094	39349392	39349243	ENSG00000275337.1	-	misc_RNA	KNOWN	RN7SL680P	1	1	-0.318720
chr20	39352778	39353023	39352900	ENSG00000281574.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.401656
chr20	39785721	39813229	39799475	ENSG00000229976.1	+	lincRNA	KNOWN	RP5-1031J8.1	1	2	-0.133796
chr20	39932922	39933239	39933080	ENSG00000234878.1	-	processed_pseudogene	KNOWN	HSPE1P1	1	1	-0.438523
chr20	40004477	40008529	40006503	ENSG00000237767.1	+	lincRNA	KNOWN	LINC01370	2	3	-0.246005
chr20	40031585	40043889	40037737	ENSG00000233415.1	+	lincRNA	KNOWN	RP11-101E14.3	1	3	-0.385167
chr20	40103219	40103357	40103288	ENSG00000281064.1	-	miRNA	NOVEL	AL009050.1	1	1	-0.111292
chr20	40121041	40126357	40123699	ENSG00000223410.1	+	lincRNA	KNOWN	RP1-191L6.2	1	3	-0.335962
chr20	40372814	40372901	40372857	ENSG00000221201.2	-	miRNA	NOVEL	AL049691.1	1	1	-0.504111
chr20	40685848	40689240	40687544	ENSG00000204103.3	-	protein_coding	KNOWN	MAFB	1	1	0.056888
chr20	40696499	40698616	40697557	ENSG00000229771.2	-	lincRNA	KNOWN	RP4-644L1.2	1	2	0.344179
chr20	40854119	40854229	40854174	ENSG00000238908.1	-	rRNA	KNOWN	RNA5SP484	1	1	0.378613
chr20	41024205	41024394	41024299	ENSG00000222612.1	+	snRNA	KNOWN	RNU2-52P	1	1	0.512402
chr20	41028818	41124487	41076652	ENSG00000198900.5	+	protein_coding	KNOWN	TOP1	1	21	0.253545
chr20	41098329	41138003	41118166	ENSG00000226648.1	-	antisense	KNOWN	PLCG1-AS1	1	7	0.248262
chr20	41136960	41196801	41166880	ENSG00000124181.14	+	protein_coding	KNOWN	PLCG1	22	33	0.626442
chr20	41169023	41169078	41169050	ENSG00000276169.1	+	miRNA	KNOWN	MIR6871	1	1	0.652949
chr20	41178448	41317672	41248060	ENSG00000174306.21	-	protein_coding	KNOWN	ZHX3	21	8	0.338907
chr20	41196647	41196938	41196792	ENSG00000272407.1	-	transcribed_processed_pseudogene	KNOWN	RP3-511B24.5	1	1	0.252456
chr20	41196691	41197157	41196924	ENSG00000242748.1	+	transcribed_processed_pseudogene	KNOWN	RPL23AP81	1	1	0.252456
chr20	41290280	41290577	41290428	ENSG00000263989.2	-	misc_RNA	KNOWN	RN7SL615P	1	1	0.285561
chr20	41331123	41331660	41331391	ENSG00000235102.1	+	processed_pseudogene	KNOWN	RP3-450M14.1	1	1	0.343531
chr20	41340920	41360582	41350751	ENSG00000132793.11	+	protein_coding	KNOWN	LPIN3	5	20	0.504474
chr20	41359966	41366827	41363396	ENSG00000183798.4	-	protein_coding	KNOWN	EMILIN3	1	4	0.642544
chr20	41382383	41383107	41382745	ENSG00000229398.1	+	processed_pseudogene	KNOWN	RP4-620E11.5	1	1	0.695434
chr20	41402101	41618494	41510297	ENSG00000124177.14	-	protein_coding	KNOWN	CHD6	9	37	0.326259
chr20	41459354	41461944	41460649	ENSG00000235088.1	-	processed_pseudogene	KNOWN	RP4-620E11.4	1	2	0.315463
chr20	41485571	41486225	41485898	ENSG00000273951.1	-	sense_intronic	KNOWN	RP4-620E11.8	1	1	0.223589
chr20	41547422	41547922	41547672	ENSG00000232493.2	+	processed_pseudogene	KNOWN	RPL12P11	1	1	0.438052
chr20	41684986	41685091	41685038	ENSG00000252386.1	-	snRNA	KNOWN	RNU6-1018P	1	1	-0.096275
chr20	41712479	41712600	41712539	ENSG00000212224.1	-	snoRNA	NOVEL	SNORA26	1	1	0.091992
chr20	41991140	42063969	42027554	ENSG00000225458.1	+	antisense	KNOWN	RP5-1121H13.4	1	2	-0.076285
chr20	41997131	41999397	41998264	ENSG00000223651.1	-	processed_pseudogene	KNOWN	RP5-1121H13.1	1	1	-0.065837
chr20	42014034	42015478	42014756	ENSG00000228959.1	-	lincRNA	KNOWN	RP5-1121H13.3	1	3	-0.229936
chr20	42072752	43189970	42631361	ENSG00000196090.12	-	protein_coding	KNOWN	PTPRT	12	32	-0.126656
chr20	42606694	42607559	42607126	ENSG00000229892.1	+	processed_pseudogene	KNOWN	RP4-730D4.1	1	2	-0.251492
chr20	42685404	42688562	42686983	ENSG00000229042.2	+	antisense	KNOWN	RP1-232N11.2	2	4	-0.087558
chr20	42968743	42971492	42970117	ENSG00000227599.1	+	antisense	KNOWN	RP4-753D4.2	1	2	0.021977
chr20	43063326	43063609	43063467	ENSG00000223190.1	+	misc_RNA	KNOWN	RN7SKP100	1	1	0.014824
chr20	43073549	43073661	43073605	ENSG00000266136.2	+	miRNA	NOVEL	AL117374.1	1	1	-0.371955
chr20	43190101	43202599	43196350	ENSG00000233508.2	+	lincRNA	KNOWN	RP1-269M15.3	2	3	0.143654
chr20	43222206	43222509	43222357	ENSG00000240639.3	+	misc_RNA	KNOWN	RN7SL666P	1	1	0.146148
chr20	43230760	43231260	43231010	ENSG00000226038.5	+	processed_pseudogene	KNOWN	PPIAP21	1	1	-0.023485
chr20	43304555	43304679	43304617	ENSG00000252193.1	+	scaRNA	NOVEL	SCARNA15	1	1	-0.316473
chr20	43304608	43304680	43304644	ENSG00000281368.1	+	miRNA	NOVEL	AL021395.1	1	1	-0.316473
chr20	43388642	43389041	43388841	ENSG00000237555.1	-	processed_pseudogene	KNOWN	RP5-862K6.4	1	1	0.315575
chr20	43400365	43400502	43400433	ENSG00000281663.1	-	miRNA	NOVEL	AL031681.1	1	1	0.234503
chr20	43405473	43405578	43405525	ENSG00000201021.1	+	snRNA	KNOWN	RNU6-743P	1	1	0.234503
chr20	43423196	43423538	43423367	ENSG00000233711.1	-	processed_pseudogene	KNOWN	EIF4EBP2P1	1	1	-0.195171
chr20	43451159	43451260	43451209	ENSG00000206998.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.341220
chr20	43457928	43464247	43461087	ENSG00000124193.14	+	protein_coding	KNOWN	SRSF6	2	7	0.341220
chr20	43473013	43473119	43473066	ENSG00000201372.1	+	snRNA	KNOWN	RNU6-1251P	1	1	0.336096
chr20	43507680	43550950	43529315	ENSG00000185513.14	+	protein_coding	KNOWN	L3MBTL1	19	22	0.561731
chr20	43523261	43523572	43523416	ENSG00000234271.1	-	processed_pseudogene	KNOWN	RP1-138B7.4	1	1	0.659676
chr20	43540171	43569498	43554834	ENSG00000277611.1	+	protein_coding	KNOWN	RP1-138B7.6	1	7	0.433252
chr20	43549389	43550949	43550169	ENSG00000226143.1	-	antisense	KNOWN	RP1-138B7.5	1	2	0.440061
chr20	43558968	43588237	43573602	ENSG00000101049.14	+	protein_coding	KNOWN	SGK2	11	14	0.563115
chr20	43590009	43590596	43590302	ENSG00000282876.1	-	lincRNA	KNOWN	RP1-138B7.7	1	1	0.329031
chr20	43590931	43647296	43619113	ENSG00000101052.12	+	protein_coding	KNOWN	IFT52	9	14	0.438189
chr20	43652523	43653291	43652907	ENSG00000215467.2	+	processed_pseudogene	KNOWN	RPL27AP	1	2	0.657589
chr20	43667019	43716496	43691757	ENSG00000101057.15	+	protein_coding	KNOWN	MYBL2	2	14	0.424096
chr20	43726164	43726998	43726581	ENSG00000124196.5	-	protein_coding	KNOWN	GTSF1L	2	2	0.747206
chr20	43796437	43796543	43796490	ENSG00000206801.1	-	snRNA	KNOWN	RNU6-639P	1	1	0.161254
chr20	43894720	43895468	43895094	ENSG00000233277.1	+	lincRNA	KNOWN	RP5-1030M6.3	1	2	0.417392
chr20	43914864	44069616	43992240	ENSG00000124191.17	+	protein_coding	KNOWN	TOX2	6	10	0.571042
chr20	44007248	44007537	44007392	ENSG00000241229.3	+	misc_RNA	KNOWN	RN7SL443P	1	1	0.412289
chr20	44111695	44187578	44149636	ENSG00000149596.6	-	protein_coding	KNOWN	JPH2	2	6	0.559301
chr20	44196496	44210791	44203643	ENSG00000132823.10	-	protein_coding	KNOWN	OSER1	2	6	0.560180
chr20	44210960	44226027	44218493	ENSG00000223891.5	+	lincRNA	KNOWN	OSER1-AS1	5	4	0.173985
chr20	44247099	44280917	44264008	ENSG00000124194.15	+	protein_coding	KNOWN	GDAP1L1	9	12	0.428644
chr20	44302838	44311169	44307003	ENSG00000197296.5	-	protein_coding	KNOWN	FITM2	1	2	0.161465
chr20	44336986	44351235	44344110	ENSG00000101074.3	+	protein_coding	KNOWN	R3HDML	1	5	0.077393
chr20	44344839	44344933	44344886	ENSG00000201363.2	+	misc_RNA	NOVEL	Y_RNA	1	1	0.047369
chr20	44347552	44355185	44351368	ENSG00000226812.2	-	antisense	KNOWN	RP5-881L22.5	2	4	0.282537
chr20	44355700	44434596	44395148	ENSG00000101076.16	+	protein_coding	KNOWN	HNF4A	9	11	0.530939
chr20	44372746	44395706	44384226	ENSG00000229005.2	-	antisense	KNOWN	HNF4A-AS1	2	4	0.374225
chr20	44389624	44391537	44390580	ENSG00000233376.1	-	antisense	KNOWN	RP5-881L22.6	1	2	0.458972
chr20	44408120	44408203	44408161	ENSG00000266151.1	+	miRNA	KNOWN	MIR3646	1	1	0.488882
chr20	44425052	44425141	44425096	ENSG00000265893.1	-	miRNA	NOVEL	AL132772.1	1	1	0.893163
chr20	44448777	44450092	44449434	ENSG00000237907.1	-	antisense	KNOWN	LINC01430	1	2	0.400130
chr20	44451984	44465344	44458664	ENSG00000168746.7	-	protein_coding	KNOWN	LINC01620	3	3	0.239890
chr20	44466564	44466842	44466703	ENSG00000226243.1	-	processed_pseudogene	KNOWN	RPL37AP1	1	1	0.239890
chr20	44475886	44494603	44485244	ENSG00000124120.10	+	protein_coding	KNOWN	TTPAL	5	6	0.419972
chr20	44496221	44522109	44509165	ENSG00000132824.13	-	protein_coding	KNOWN	SERINC3	4	11	0.357893
chr20	44531785	44624247	44578016	ENSG00000168734.13	+	protein_coding	KNOWN	PKIG	8	6	0.617426
chr20	44619522	44652233	44635877	ENSG00000196839.12	-	protein_coding	KNOWN	ADA	9	12	0.784512
chr20	44656451	44696096	44676273	ENSG00000132832.9	-	antisense	KNOWN	LINC01260	2	6	0.504304
chr20	44694892	44746021	44720456	ENSG00000244558.5	-	antisense	KNOWN	KCNK15-AS1	4	5	0.666470
chr20	44714844	44728509	44721676	ENSG00000064205.10	+	protein_coding	KNOWN	WISP2	6	5	0.775358
chr20	44745780	44752313	44749046	ENSG00000124249.6	+	protein_coding	KNOWN	KCNK15	1	2	0.593300
chr20	44746642	44747201	44746921	ENSG00000276223.1	+	sense_intronic	KNOWN	RP4-781B1.5	1	1	0.600783
chr20	44751808	44810338	44781073	ENSG00000101098.12	-	protein_coding	KNOWN	RIMS4	2	6	0.471140
chr20	44841925	44842539	44842232	ENSG00000277708.1	-	unprocessed_pseudogene	KNOWN	PGBD4P2	1	1	0.130262
chr20	44885676	44908532	44897104	ENSG00000166913.12	+	protein_coding	KNOWN	YWHAB	8	7	0.213257
chr20	44910062	44959035	44934548	ENSG00000101104.12	+	protein_coding	KNOWN	PABPC1L	17	15	0.538314
chr20	44942130	44960486	44951308	ENSG00000025772.7	-	protein_coding	KNOWN	TOMM34	1	7	0.570579
chr20	44963794	44966402	44965098	ENSG00000227477.1	-	lincRNA	KNOWN	STK4-AS1	2	3	0.505099
chr20	44966474	45079959	45023216	ENSG00000101109.11	+	protein_coding	KNOWN	STK4	7	12	0.262107
chr20	45004348	45004454	45004401	ENSG00000252021.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.276732
chr20	45092310	45101112	45096711	ENSG00000124134.8	-	protein_coding	KNOWN	KCNS1	2	5	0.448383
chr20	45109452	45115172	45112312	ENSG00000175121.11	-	protein_coding	KNOWN	WFDC5	2	4	0.236765
chr20	45123425	45124465	45123945	ENSG00000168703.5	-	protein_coding	KNOWN	WFDC12	1	3	0.214388
chr20	45174876	45176544	45175710	ENSG00000124102.4	+	protein_coding	KNOWN	PI3	1	3	-0.360520
chr20	45206997	45209772	45208384	ENSG00000124233.11	+	protein_coding	KNOWN	SEMG1	1	3	-0.094663
chr20	45221300	45224458	45222879	ENSG00000124157.6	+	protein_coding	KNOWN	SEMG2	1	3	-0.110825
chr20	45229817	45230191	45230004	ENSG00000233352.1	+	unprocessed_pseudogene	KNOWN	RP1-300I2.3	1	2	-0.160779
chr20	45230868	45233331	45232099	ENSG00000243995.1	+	unitary_pseudogene	KNOWN	RP1-300I2.2	2	3	-0.208132
chr20	45252239	45254564	45253401	ENSG00000124107.5	-	protein_coding	KNOWN	SLPI	1	4	-0.087987
chr20	45293445	45308529	45300987	ENSG00000124159.15	-	protein_coding	KNOWN	MATN4	5	11	0.260030
chr20	45306851	45317824	45312337	ENSG00000124232.10	+	protein_coding	KNOWN	RBPJL	5	12	0.458176
chr20	45325288	45348424	45336856	ENSG00000124145.6	-	protein_coding	KNOWN	SDC4	1	5	0.689433
chr20	45345115	45345823	45345469	ENSG00000275894.1	-	sense_intronic	KNOWN	RP3-453C12.14	1	1	0.728180
chr20	45361937	45376798	45369367	ENSG00000204070.9	+	protein_coding	KNOWN	SYS1	8	5	0.448574
chr20	45363200	45410610	45386905	ENSG00000254806.5	+	protein_coding	KNOWN	SYS1-DBNDD2	4	6	0.319366
chr20	45372563	45407889	45390226	ENSG00000124251.10	-	protein_coding	KNOWN	TP53TG5	4	6	0.285114
chr20	45388347	45388705	45388526	ENSG00000232880.1	-	processed_pseudogene	KNOWN	RP3-453C12.8	1	1	0.405746
chr20	45406057	45410610	45408333	ENSG00000244274.7	+	protein_coding	KNOWN	DBNDD2	9	4	0.228510
chr20	45416077	45426244	45421160	ENSG00000124155.16	+	protein_coding	KNOWN	PIGT	7	12	0.621850
chr20	45425510	45425573	45425541	ENSG00000273555.1	+	miRNA	KNOWN	MIR6812	1	1	0.621850
chr20	45435272	45448325	45441798	ENSG00000277022.1	-	lincRNA	KNOWN	RP3-453C12.15	1	2	0.518051
chr20	45445431	45448580	45447005	ENSG00000269549.2	+	lincRNA	KNOWN	RP3-461P17.10	2	2	0.518051
chr20	45469706	45481532	45475619	ENSG00000101443.17	+	protein_coding	KNOWN	WFDC2	7	5	-0.070012
chr20	45487613	45490248	45488930	ENSG00000237464.1	+	antisense	KNOWN	RP3-461P17.9	1	2	-0.050035
chr20	45490818	45491671	45491244	ENSG00000237068.1	-	processed_pseudogene	KNOWN	RPL5P2	1	1	0.191527
chr20	45512461	45515624	45514042	ENSG00000101446.7	-	protein_coding	KNOWN	SPINT3	1	2	-0.005107
chr20	45534196	45539495	45536845	ENSG00000243543.8	-	protein_coding	KNOWN	WFDC6	2	3	0.177568
chr20	45536796	45537014	45536905	ENSG00000232135.1	-	processed_pseudogene	KNOWN	RP3-461P17.6	1	1	0.177568
chr20	45536986	45547426	45542206	ENSG00000249139.1	-	protein_coding	KNOWN	EPPIN-WFDC6	1	5	0.177568
chr20	45539983	45540227	45540105	ENSG00000229900.1	-	processed_pseudogene	KNOWN	HSPD1P21	1	1	0.177568
chr20	45540626	45547752	45544189	ENSG00000101448.13	-	protein_coding	KNOWN	EPPIN	4	4	0.177568
chr20	45551153	45579326	45565239	ENSG00000158901.11	-	protein_coding	KNOWN	WFDC8	2	7	-0.115455
chr20	45559758	45559876	45559817	ENSG00000201923.1	-	rRNA	KNOWN	RNA5SP485	1	1	-0.238349
chr20	45567990	45568807	45568398	ENSG00000230860.1	-	processed_pseudogene	KNOWN	CCNB1IP1P2	1	1	-0.238349
chr20	45607939	45631268	45619603	ENSG00000180205.3	-	protein_coding	KNOWN	WFDC9	1	5	-0.439350
chr20	45629526	45631196	45630361	ENSG00000180305.4	+	protein_coding	KNOWN	WFDC10A	1	2	-0.189696
chr20	45640486	45641370	45640928	ENSG00000235508.3	-	processed_pseudogene	KNOWN	RPS2P7	1	1	-0.063659
chr20	45648563	45670270	45659416	ENSG00000180083.10	-	protein_coding	KNOWN	WFDC11	3	5	-0.150187
chr20	45684653	45705019	45694836	ENSG00000182931.9	-	protein_coding	KNOWN	WFDC10B	2	4	-0.046291
chr20	45702016	45708817	45705416	ENSG00000168634.4	+	protein_coding	KNOWN	WFDC13	1	4	0.040064
chr20	45705102	45705180	45705141	ENSG00000266071.1	-	miRNA	KNOWN	MIR3617	1	1	0.040064
chr20	45722351	45725830	45724090	ENSG00000149651.3	+	protein_coding	KNOWN	SPINT4	1	3	-0.143896
chr20	45745737	45746287	45746012	ENSG00000226188.2	-	processed_pseudogene	KNOWN	HNRNPA1P3	1	1	-0.032704
chr20	45747944	45791932	45769938	ENSG00000124116.18	-	protein_coding	KNOWN	WFDC3	13	7	0.171973
chr20	45749920	45750074	45749997	ENSG00000168630.3	+	processed_pseudogene	KNOWN	SPINT5P	1	1	-0.039701
chr20	45778698	45778823	45778760	ENSG00000221046.1	+	snRNA	KNOWN	RNU6ATAC38P	1	1	0.377810
chr20	45791937	45811427	45801682	ENSG00000101457.12	+	protein_coding	KNOWN	DNTTIP1	6	13	0.518535
chr20	45812576	45816957	45814766	ENSG00000175063.16	+	protein_coding	KNOWN	UBE2C	8	6	0.421299
chr20	45823214	45833745	45828479	ENSG00000101470.9	-	protein_coding	KNOWN	TNNC2	2	7	0.521760
chr20	45833810	45843275	45838542	ENSG00000124104.18	+	protein_coding	KNOWN	SNX21	13	6	0.703721
chr20	45841721	45857406	45849563	ENSG00000101473.16	-	protein_coding	KNOWN	ACOT8	12	6	0.738085
chr20	45847630	45847940	45847785	ENSG00000277051.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.703721
chr20	45857617	45879122	45868369	ENSG00000132801.6	+	protein_coding	KNOWN	ZSWIM3	1	2	0.670393
chr20	45881227	45885266	45883246	ENSG00000168612.4	+	protein_coding	KNOWN	ZSWIM1	2	3	0.526395
chr20	45886489	45887635	45887062	ENSG00000149634.4	-	protein_coding	KNOWN	SPATA25	1	2	0.526395
chr20	45888625	45891287	45889956	ENSG00000124257.6	-	protein_coding	KNOWN	NEURL2	2	2	0.812711
chr20	45890144	45898820	45894482	ENSG00000064601.16	+	protein_coding	KNOWN	CTSA	19	15	1.118144
chr20	45892694	45893419	45893056	ENSG00000271984.1	-	antisense	KNOWN	RP3-337O18.9	1	2	1.118144
chr20	45898621	45912155	45905388	ENSG00000100979.14	-	protein_coding	KNOWN	PLTP	5	16	1.079250
chr20	45934628	45948023	45941325	ENSG00000100982.11	+	protein_coding	KNOWN	PCIF1	3	17	0.794400
chr20	45948653	45972172	45960412	ENSG00000198026.7	-	protein_coding	KNOWN	ZNF335	4	28	0.978564
chr20	45975249	45976075	45975662	ENSG00000235525.1	-	processed_pseudogene	KNOWN	FTLP1	1	2	0.651419
chr20	46008908	46016561	46012734	ENSG00000100985.7	+	protein_coding	KNOWN	MMP9	1	13	0.582272
chr20	46013500	46022073	46017786	ENSG00000204044.6	-	antisense	KNOWN	RP11-465L10.10	2	3	0.592146
chr20	46021690	46060152	46040921	ENSG00000124140.12	+	protein_coding	KNOWN	SLC12A5	21	27	0.586999
chr20	46060985	46089952	46075468	ENSG00000124160.11	-	protein_coding	KNOWN	NCOA5	2	8	0.441333
chr20	46099518	46100176	46099847	ENSG00000213820.3	+	processed_pseudogene	KNOWN	RPL13P2	1	1	0.278405
chr20	46118272	46129863	46124067	ENSG00000101017.13	+	protein_coding	KNOWN	CD40	7	10	0.050172
chr20	46168404	46171237	46169820	ENSG00000229957.1	-	lincRNA	KNOWN	RP5-998H6.2	1	2	0.508576
chr20	46173733	46308498	46241115	ENSG00000149654.9	-	protein_coding	KNOWN	CDH22	3	12	0.481207
chr20	46345980	46364458	46355219	ENSG00000080189.14	-	protein_coding	KNOWN	SLC35C2	13	11	0.926215
chr20	46364551	46390885	46377718	ENSG00000273828.1	+	antisense	KNOWN	RP11-394O2.3	1	5	0.732502
chr20	46366049	46432985	46399517	ENSG00000062598.17	-	protein_coding	KNOWN	ELMO2	18	22	0.556485
chr20	46414228	46459276	46436752	ENSG00000215452.3	-	unitary_pseudogene	KNOWN	ZNF663P	2	4	0.207752
chr20	46463902	46465124	46464513	ENSG00000225849.1	-	processed_pseudogene	KNOWN	RP5-981L23.2	1	1	0.109374
chr20	46484461	46492640	46488550	ENSG00000184617.10	+	unprocessed_pseudogene	KNOWN	ZNF840P	1	3	-0.256184
chr20	46499630	46513559	46506594	ENSG00000198185.11	-	protein_coding	KNOWN	ZNF334	6	6	-0.331998
chr20	46540946	46550574	46545760	ENSG00000149635.2	-	protein_coding	KNOWN	OCSTAMP	1	3	0.057414
chr20	46557823	46684467	46621145	ENSG00000158296.13	-	protein_coding	KNOWN	SLC13A3	11	13	0.158081
chr20	46681676	46682375	46682025	ENSG00000273893.1	-	sense_intronic	KNOWN	RP1-101A2.1	1	1	0.426411
chr20	46684365	46689779	46687072	ENSG00000172315.5	-	protein_coding	KNOWN	TP53RK	2	2	0.426411
chr20	46689659	46690289	46689974	ENSG00000271784.1	+	lincRNA	KNOWN	RP1-28H20.3	1	1	0.356470
chr20	46709487	46736347	46722917	ENSG00000197496.5	+	protein_coding	KNOWN	SLC2A10	3	5	0.597542
chr20	46859333	46859672	46859502	ENSG00000222874.1	+	misc_RNA	KNOWN	RN7SKP33	1	1	0.077195
chr20	46863563	46864104	46863833	ENSG00000235922.1	-	processed_pseudogene	KNOWN	RP11-323C15.1	1	1	0.077195
chr20	46894624	47188844	47041734	ENSG00000064655.18	+	protein_coding	KNOWN	EYA2	10	16	0.186716
chr20	46901143	46901726	46901434	ENSG00000236028.1	-	lincRNA	KNOWN	RP11-323C15.2	1	2	0.169994
chr20	46997596	46998488	46998042	ENSG00000226769.1	+	processed_pseudogene	KNOWN	GAPDHP54	1	1	0.142873
chr20	47071865	47072236	47072050	ENSG00000239783.1	+	processed_pseudogene	KNOWN	RP5-1050K3.3	1	1	0.108294
chr20	47160838	47161700	47161269	ENSG00000215450.2	-	processed_pseudogene	KNOWN	RP5-890O15.3	1	1	0.415531
chr20	47166967	47167058	47167012	ENSG00000264901.1	+	miRNA	KNOWN	MIR3616	1	1	0.415531
chr20	47209214	47356889	47283051	ENSG00000101040.19	-	protein_coding	KNOWN	ZMYND8	21	24	0.507191
chr20	47318502	47320754	47319628	ENSG00000267882.2	+	antisense	KNOWN	RP4-569M23.5	1	1	0.859212
chr20	47348137	47349142	47348639	ENSG00000273451.1	-	sense_intronic	KNOWN	RP4-569M23.4	1	1	0.661013
chr20	47352561	47354633	47353597	ENSG00000231119.2	+	antisense	KNOWN	RP4-569M23.2	1	2	0.662308
chr20	47391929	47412327	47402128	ENSG00000224565.1	-	lincRNA	KNOWN	RP1-148H17.1	1	4	0.513619
chr20	47478214	47479010	47478612	ENSG00000234075.1	-	processed_pseudogene	KNOWN	RPL35AP	1	2	0.279982
chr20	47484278	47484381	47484329	ENSG00000202186.1	-	snRNA	KNOWN	RNU6-497P	1	1	0.279982
chr20	47492978	47493085	47493031	ENSG00000201742.1	-	snRNA	KNOWN	RNU6-563P	1	1	0.300100
chr20	47501902	47656877	47579389	ENSG00000124151.18	+	protein_coding	KNOWN	NCOA3	5	23	0.299009
chr20	47570935	47571015	47570975	ENSG00000221294.1	+	miRNA	NOVEL	AL021394.1	1	1	0.337843
chr20	47630266	47631438	47630852	ENSG00000229853.1	-	processed_pseudogene	KNOWN	RP5-1049G16.4	1	2	-0.023485
chr20	47651067	47651156	47651111	ENSG00000280970.1	+	miRNA	NOVEL	AL034418.1	1	1	0.117083
chr20	47656348	47786616	47721482	ENSG00000196562.14	-	protein_coding	KNOWN	SULF2	12	21	0.239332
chr20	47677901	47686297	47682099	ENSG00000255438.2	+	antisense	KNOWN	CTD-2653D5.1	1	4	0.423401
chr20	47826969	47827044	47827006	ENSG00000238950.1	-	snRNA	KNOWN	RNU7-173P	1	1	0.209124
chr20	47859788	47860672	47860230	ENSG00000215448.3	+	processed_pseudogene	KNOWN	SRMP1	1	1	0.184641
chr20	47873191	47873273	47873232	ENSG00000251770.1	+	rRNA	KNOWN	RNA5SP486	1	1	0.201443
chr20	47904348	47904423	47904385	ENSG00000238785.1	+	snRNA	KNOWN	RNU7-92P	1	1	0.247749
chr20	47950799	47952055	47951427	ENSG00000234967.1	+	lincRNA	KNOWN	RP11-347D21.1	1	2	0.303830
chr20	47958022	47958603	47958312	ENSG00000228503.1	+	lincRNA	KNOWN	RP11-347D21.2	1	2	0.303830
chr20	47980488	47988744	47984616	ENSG00000237423.1	-	lincRNA	KNOWN	LINC01522	1	2	0.242326
chr20	47983404	47984313	47983858	ENSG00000229522.1	+	lincRNA	KNOWN	LINC01523	1	2	0.242326
chr20	48073869	48074188	48074028	ENSG00000276923.1	+	lincRNA	KNOWN	RP11-321P16.1	1	1	0.057844
chr20	48090129	48090218	48090173	ENSG00000276815.1	+	miRNA	NOVEL	AL139351.1	1	1	0.001794
chr20	48359950	48370629	48365289	ENSG00000235621.8	+	lincRNA	KNOWN	LINC00494	4	5	0.303041
chr20	48383323	48384895	48384109	ENSG00000236874.1	-	lincRNA	KNOWN	RP1-66N13.1	1	2	0.068276
chr20	48407367	48410716	48409041	ENSG00000274261.1	+	lincRNA	KNOWN	RP1-66N13.4	1	3	0.159934
chr20	48471308	48472414	48471861	ENSG00000281365.1	+	lincRNA	KNOWN	RP5-991B18.1	1	2	0.168490
chr20	48476999	48477553	48477276	ENSG00000281460.1	+	lincRNA	KNOWN	RP5-991B18.2	1	1	0.168490
chr20	48494234	48494309	48494271	ENSG00000238452.1	-	snRNA	KNOWN	RNU7-144P	1	1	0.458625
chr20	48624252	48827883	48726067	ENSG00000124126.13	-	protein_coding	KNOWN	PREX1	4	40	0.311653
chr20	48739330	48739448	48739389	ENSG00000251876.1	-	miRNA	NOVEL	AL035106.1	1	1	0.364289
chr20	48821688	48849458	48835573	ENSG00000278231.1	-	lincRNA	KNOWN	RP5-906C1.1	1	2	0.399908
chr20	48921890	49036693	48979291	ENSG00000124198.8	+	protein_coding	KNOWN	ARFGEF2	2	39	0.336035
chr20	49038357	49038602	49038479	ENSG00000230758.1	-	processed_pseudogene	KNOWN	SNAP23P	1	1	0.524307
chr20	49040463	49046044	49043253	ENSG00000227431.5	-	antisense	KNOWN	CSE1L-AS1	2	3	0.524307
chr20	49046246	49096960	49071603	ENSG00000124207.16	+	protein_coding	KNOWN	CSE1L	3	25	0.393513
chr20	49113339	49188367	49150853	ENSG00000124214.19	-	protein_coding	KNOWN	STAU1	10	15	0.394007
chr20	49134480	49135012	49134746	ENSG00000226284.1	+	processed_pseudogene	KNOWN	ARPC3P1	1	1	0.277024
chr20	49219295	49244077	49231686	ENSG00000124228.14	+	protein_coding	KNOWN	DDX27	7	21	0.597715
chr20	49237946	49278426	49258186	ENSG00000124201.14	-	protein_coding	KNOWN	ZNFX1	6	15	0.638861
chr20	49278178	49295738	49286958	ENSG00000177410.12	+	antisense	KNOWN	ZFAS1	10	6	0.646389
chr20	49278427	49278624	49278525	ENSG00000277830.1	+	misc_RNA	NOVEL	ZNFX1-AS1_1	1	1	0.698790
chr20	49278940	49279028	49278984	ENSG00000209042.1	+	snoRNA	KNOWN	SNORD12C	1	1	0.698790
chr20	49279116	49279208	49279162	ENSG00000274760.1	+	misc_RNA	NOVEL	ZNFX1-AS1_2	1	1	0.698790
chr20	49280319	49280409	49280364	ENSG00000222365.1	+	snoRNA	KNOWN	SNORD12B	1	1	0.698790
chr20	49280485	49280571	49280528	ENSG00000277967.1	+	misc_RNA	NOVEL	ZNFX1-AS1_3	1	1	0.698790
chr20	49280683	49280772	49280727	ENSG00000212304.1	+	snoRNA	KNOWN	SNORD12	1	1	0.698790
chr20	49363877	49484297	49424087	ENSG00000158445.8	-	protein_coding	KNOWN	KCNB1	3	3	0.537332
chr20	49503874	49568146	49536010	ENSG00000124212.5	-	protein_coding	KNOWN	PTGIS	2	10	0.469350
chr20	49586681	49586774	49586727	ENSG00000265225.1	+	miRNA	NOVEL	AL118525.1	1	1	0.813890
chr20	49632945	49713878	49673411	ENSG00000158470.5	-	protein_coding	KNOWN	B4GALT5	1	9	0.386725
chr20	49721949	49722247	49722098	ENSG00000276031.1	+	misc_RNA	KNOWN	RN7SL197P	1	1	0.314384
chr20	49729591	49729842	49729716	ENSG00000231878.1	-	processed_pseudogene	KNOWN	SNRPFP1	1	1	0.314384
chr20	49794811	49794914	49794862	ENSG00000252540.1	+	snRNA	KNOWN	RNU6-919P	1	1	0.704262
chr20	49812713	49892242	49852477	ENSG00000197818.11	+	protein_coding	KNOWN	SLC9A8	4	16	0.337385
chr20	49829125	49831085	49830105	ENSG00000237788.1	+	processed_pseudogene	KNOWN	RP5-1041C10.3	1	2	0.366049
chr20	49903391	49915508	49909449	ENSG00000158480.10	-	protein_coding	KNOWN	SPATA2	2	3	0.673009
chr20	49920597	49920694	49920645	ENSG00000199490.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.524623
chr20	49932795	49933078	49932936	ENSG00000269103.2	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.824972
chr20	49936336	49953892	49945114	ENSG00000124226.10	+	protein_coding	KNOWN	RNF114	8	6	0.794106
chr20	49956745	49958032	49957388	ENSG00000229222.1	+	processed_pseudogene	KNOWN	KRT18P4	1	1	0.685778
chr20	49972106	49972212	49972159	ENSG00000206710.1	+	snRNA	KNOWN	RNU6-147P	1	1	0.633138
chr20	49982999	49988886	49985942	ENSG00000124216.3	+	protein_coding	KNOWN	SNAI1	1	3	0.633138
chr20	50040716	50041504	50041110	ENSG00000231265.1	-	lincRNA	KNOWN	TRERNA1	1	2	0.713058
chr20	50081124	50115959	50098541	ENSG00000244687.11	-	protein_coding	KNOWN	UBE2V1	24	5	0.541911
chr20	50081124	50153637	50117380	ENSG00000124208.16	-	protein_coding	KNOWN	TMEM189-UBE2V1	1	8	0.701140
chr20	50118254	50153734	50135994	ENSG00000240849.10	-	protein_coding	KNOWN	TMEM189	5	7	0.853118
chr20	50162765	50166102	50164433	ENSG00000237595.3	-	lincRNA	KNOWN	RP11-112L6.3	2	2	1.064856
chr20	50166362	50171742	50169052	ENSG00000234698.1	+	lincRNA	KNOWN	RP11-112L6.2	2	2	1.021467
chr20	50172550	50176671	50174610	ENSG00000231742.5	+	lincRNA	KNOWN	LINC01273	2	3	0.930929
chr20	50184598	50191498	50188048	ENSG00000277449.1	-	antisense	KNOWN	CEBPB-AS1	1	6	0.917605
chr20	50190734	50192689	50191711	ENSG00000172216.5	+	protein_coding	KNOWN	CEBPB	1	1	0.869599
chr20	50267486	50279795	50273640	ENSG00000224397.5	+	lincRNA	KNOWN	LINC01272	5	4	0.797936
chr20	50292720	50314922	50303821	ENSG00000203999.8	+	lincRNA	KNOWN	LINC01270	2	5	0.790804
chr20	50310711	50321342	50316026	ENSG00000233077.1	-	lincRNA	KNOWN	LINC01271	1	3	0.860322
chr20	50429190	50429483	50429336	ENSG00000244376.3	-	misc_RNA	KNOWN	RN7SL636P	1	1	0.172162
chr20	50479767	50479991	50479879	ENSG00000231715.1	+	processed_pseudogene	KNOWN	COX6CP2	1	1	0.556782
chr20	50510321	50585241	50547781	ENSG00000196396.9	+	protein_coding	KNOWN	PTPN1	2	10	0.498536
chr20	50557682	50557998	50557840	ENSG00000239742.3	-	misc_RNA	KNOWN	RN7SL672P	1	1	0.356448
chr20	50563009	50563110	50563059	ENSG00000201501.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.356448
chr20	50570975	50578041	50574508	ENSG00000232043.1	-	antisense	KNOWN	RP4-530I15.9	1	2	0.716483
chr20	50585786	50585879	50585832	ENSG00000208018.1	+	miRNA	KNOWN	MIR645	1	1	0.716483
chr20	50586108	50691528	50638818	ENSG00000042062.11	-	protein_coding	KNOWN	FAM65C	6	22	0.762430
chr20	50614636	50614785	50614710	ENSG00000221091.1	-	miRNA	KNOWN	MIR1302-5	1	1	0.866699
chr20	50620763	50621077	50620920	ENSG00000231302.1	+	processed_pseudogene	KNOWN	RPL36P2	1	1	0.866699
chr20	50622189	50622299	50622244	ENSG00000278453.1	-	miRNA	NOVEL	AL133230.1	1	1	0.866699
chr20	50645471	50662275	50653873	ENSG00000234693.1	+	antisense	KNOWN	RP4-530I15.6	2	4	0.729312
chr20	50731544	50756795	50744169	ENSG00000124171.8	+	protein_coding	KNOWN	PARD6B	2	3	0.209943
chr20	50794894	50882676	50838785	ENSG00000124243.17	+	protein_coding	KNOWN	BCAS4	6	6	0.595976
chr20	50840615	50840749	50840682	ENSG00000230043.1	-	processed_pseudogene	KNOWN	TMSB4XP6	1	1	0.785103
chr20	50860908	50860986	50860947	ENSG00000265062.1	+	miRNA	NOVEL	AL133228.1	1	1	0.580491
chr20	50888919	50931240	50910079	ENSG00000101126.15	-	protein_coding	KNOWN	ADNP	6	6	0.226067
chr20	50913731	50914411	50914071	ENSG00000228663.1	+	processed_pseudogene	KNOWN	PSMD10P1	1	1	-0.052825
chr20	50930984	50945134	50938059	ENSG00000259456.3	+	antisense	KNOWN	ADNP-AS1	2	3	0.555939
chr20	50934867	50958555	50946711	ENSG00000000419.12	-	protein_coding	KNOWN	DPM1	6	10	0.351631
chr20	50938646	50938732	50938689	ENSG00000265582.1	+	miRNA	NOVEL	AL034553.1	1	1	0.555939
chr20	50958826	50963931	50961378	ENSG00000124217.4	+	protein_coding	KNOWN	MOCS3	1	1	-0.009704
chr20	50999370	51010019	51004694	ENSG00000232358.1	+	antisense	KNOWN	RP5-955M13.4	1	3	0.365785
chr20	51003656	51023129	51013392	ENSG00000026559.13	-	protein_coding	KNOWN	KCNG1	6	4	0.643238
chr20	51098138	51098845	51098491	ENSG00000279835.1	+	TEC	KNOWN	RP4-811M8.1	1	1	0.397978
chr20	51130788	51131667	51131227	ENSG00000228820.2	-	processed_pseudogene	KNOWN	RPSAP1	1	1	0.289350
chr20	51177505	51177599	51177552	ENSG00000263592.1	+	miRNA	NOVEL	AL035457.1	1	1	0.223236
chr20	51377235	51377321	51377278	ENSG00000263645.1	-	miRNA	NOVEL	AL079339.1	1	1	0.492954
chr20	51386957	51562831	51474894	ENSG00000101096.19	-	protein_coding	KNOWN	NFATC2	7	11	0.480303
chr20	51452905	51452977	51452941	ENSG00000266761.1	-	miRNA	KNOWN	MIR3194	1	1	0.665031
chr20	51596514	51768634	51682574	ENSG00000054793.13	-	protein_coding	KNOWN	ATP9A	3	28	0.451576
chr20	51717854	51717962	51717908	ENSG00000275370.1	+	miRNA	NOVEL	AL138807.1	1	1	0.483075
chr20	51734533	51735067	51734800	ENSG00000215444.2	+	processed_pseudogene	KNOWN	RP5-827A12.2	1	2	0.447087
chr20	51782331	51802520	51792425	ENSG00000101115.12	-	protein_coding	KNOWN	SALL4	5	4	0.338952
chr20	51831797	51862912	51847354	ENSG00000227964.1	-	lincRNA	KNOWN	LINC01429	1	3	0.769561
chr20	51902291	51902395	51902343	ENSG00000252467.1	+	snRNA	KNOWN	RNU6-347P	1	1	0.602788
chr20	51904969	51905030	51904999	ENSG00000252654.1	+	snRNA	KNOWN	RNU7-6P	1	1	0.602788
chr20	52051663	52204308	52127985	ENSG00000020256.19	-	protein_coding	KNOWN	ZFP64	12	9	0.240480
chr20	52110344	52111049	52110696	ENSG00000233347.1	-	processed_pseudogene	KNOWN	ERP29P1	1	1	0.270137
chr20	52210645	52650431	52430538	ENSG00000234948.1	+	lincRNA	KNOWN	LINC01524	2	7	-0.169570
chr20	52241185	52241266	52241225	ENSG00000276817.1	+	miRNA	NOVEL	AL121923.1	1	1	0.031329
chr20	52451464	52455619	52453541	ENSG00000225785.1	-	lincRNA	KNOWN	RP4-583K8.1	1	3	-0.074980
chr20	52482801	52482991	52482896	ENSG00000275958.1	-	misc_RNA	NOVEL	uc_338	1	1	0.033777
chr20	52487922	52500591	52494256	ENSG00000232465.1	-	lincRNA	KNOWN	RP5-1022J11.2	1	2	-0.232034
chr20	52511252	52511568	52511410	ENSG00000234821.1	+	processed_pseudogene	KNOWN	MRPS33P4	1	1	-0.555435
chr20	52671917	52690929	52681423	ENSG00000232294.5	+	lincRNA	KNOWN	RP4-715N11.2	6	5	-0.083034
chr20	52858338	52862855	52860596	ENSG00000232286.1	-	lincRNA	KNOWN	RP11-80K6.2	1	2	-0.387816
chr20	52890162	52890386	52890274	ENSG00000230636.1	+	processed_pseudogene	KNOWN	RPL36P1	1	1	-0.282753
chr20	52972407	53495330	53233868	ENSG00000182463.15	+	protein_coding	KNOWN	TSHZ2	5	3	-0.233608
chr20	53062617	53062701	53062659	ENSG00000252629.1	+	miRNA	NOVEL	AL050316.1	1	1	-0.267411
chr20	53097652	53097984	53097818	ENSG00000199218.1	+	misc_RNA	KNOWN	RN7SKP184	1	1	-0.076885
chr20	53168643	53179550	53174096	ENSG00000223492.1	-	antisense	KNOWN	RP11-15M15.1	1	2	-0.013917
chr20	53196229	53208705	53202467	ENSG00000227705.1	-	antisense	KNOWN	RP11-15M15.2	1	5	-0.261283
chr20	53255979	53487274	53371626	ENSG00000271774.1	-	antisense	KNOWN	RP4-678D15.1	1	3	-0.212622
chr20	53397661	53412910	53405285	ENSG00000231703.2	-	antisense	KNOWN	RP4-669H2.1	1	3	-0.157090
chr20	53421199	53421656	53421427	ENSG00000224530.1	+	processed_pseudogene	KNOWN	PPIAP10	1	1	-0.017831
chr20	53453058	53504314	53478686	ENSG00000259723.1	-	antisense	KNOWN	RP5-823G15.5	1	4	-0.352419
chr20	53544615	53544725	53544670	ENSG00000206959.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.005107
chr20	53552770	53575863	53564316	ENSG00000197670.6	+	antisense	KNOWN	RP4-724E16.2	1	6	0.233239
chr20	53567065	53609907	53588486	ENSG00000171940.13	-	protein_coding	KNOWN	ZNF217	5	6	0.204986
chr20	53608354	53634590	53621472	ENSG00000235415.1	+	lincRNA	KNOWN	AC005808.3	1	3	0.237362
chr20	53668697	53668758	53668727	ENSG00000238468.1	-	snRNA	KNOWN	RNU7-14P	1	1	0.406502
chr20	53799823	53801318	53800570	ENSG00000225563.1	-	lincRNA	KNOWN	AC006076.1	1	2	0.153721
chr20	53875252	53875557	53875404	ENSG00000241721.1	-	processed_pseudogene	KNOWN	SUMO1P1	1	1	-0.106652
chr20	53936777	54070594	54003685	ENSG00000064787.12	-	protein_coding	KNOWN	BCAS1	5	12	-0.116118
chr20	53940160	53942508	53941334	ENSG00000236352.1	+	antisense	KNOWN	AC005220.3	1	3	0.402592
chr20	54068408	54068485	54068446	ENSG00000265595.1	-	miRNA	KNOWN	MIR4756	1	1	0.012557
chr20	54153449	54173973	54163711	ENSG00000019186.9	-	protein_coding	KNOWN	CYP24A1	6	12	-0.057013
chr20	54207847	54228052	54217949	ENSG00000101132.9	+	protein_coding	KNOWN	PFDN4	5	6	0.127113
chr20	54249953	54250327	54250140	ENSG00000280041.1	+	protein_coding	KNOWN	AL133335.1	1	1	-0.150727
chr20	54376458	54376558	54376508	ENSG00000274453.1	+	miRNA	NOVEL	AL389883.1	1	1	-0.315886
chr20	54475597	54651171	54563384	ENSG00000101134.11	+	protein_coding	KNOWN	DOK5	4	8	-0.249662
chr20	54859688	54859812	54859750	ENSG00000252089.1	-	snRNA	KNOWN	RNU4ATAC7P	1	1	-0.420343
chr20	55074644	55075140	55074892	ENSG00000185834.10	+	processed_pseudogene	KNOWN	RPL12P4	1	1	-0.505249
chr20	55408898	55482777	55445837	ENSG00000235166.7	+	lincRNA	KNOWN	LINC01440	10	8	-0.229986
chr20	55420336	55427197	55423766	ENSG00000224008.1	-	lincRNA	KNOWN	LINC01441	1	3	-0.419907
chr20	55504906	55505215	55505060	ENSG00000275923.1	-	lincRNA	KNOWN	RP5-837G17.1	1	1	-0.320449
chr20	55997440	56005472	56001456	ENSG00000054803.3	-	protein_coding	KNOWN	CBLN4	1	3	-0.264152
chr20	56205052	56205173	56205112	ENSG00000222118.1	-	rRNA	KNOWN	RNA5SP487	1	1	-0.169395
chr20	56248732	56249815	56249273	ENSG00000124089.4	+	protein_coding	KNOWN	MC3R	1	1	-0.069896
chr20	56267872	56269231	56268551	ENSG00000235594.1	+	processed_pseudogene	KNOWN	RP11-380D15.2	1	2	0.122526
chr20	56295967	56299160	56297563	ENSG00000230843.1	-	lincRNA	KNOWN	RP11-380D15.3	1	2	0.005056
chr20	56358915	56368663	56363789	ENSG00000124098.9	+	protein_coding	KNOWN	FAM210B	2	3	0.209989
chr20	56369389	56392337	56380863	ENSG00000087586.17	-	protein_coding	KNOWN	AURKA	13	10	0.299997
chr20	56392371	56406369	56399370	ENSG00000101138.11	+	protein_coding	KNOWN	CSTF1	8	6	0.688927
chr20	56412112	56460387	56436249	ENSG00000087589.16	+	protein_coding	KNOWN	CASS4	3	7	0.222292
chr20	56459428	56459583	56459505	ENSG00000228601.1	-	processed_pseudogene	KNOWN	RPL39P	1	1	0.168749
chr20	56460266	56460357	56460311	ENSG00000212084.2	-	miRNA	NOVEL	AL121914.1	1	1	0.168749
chr20	56468585	56519449	56494017	ENSG00000022277.12	+	protein_coding	KNOWN	RTFDC1	9	10	0.242562
chr20	56491492	56525925	56508708	ENSG00000124091.9	-	protein_coding	KNOWN	GCNT7	2	7	0.202161
chr20	56517187	56526142	56521664	ENSG00000124103.8	+	protein_coding	KNOWN	FAM209A	2	4	0.156441
chr20	56522252	56523499	56522875	ENSG00000280387.1	+	TEC	KNOWN	RP5-1153D9.5	1	1	0.156441
chr20	56533246	56536520	56534883	ENSG00000213714.1	+	protein_coding	KNOWN	FAM209B	1	2	0.022451
chr20	56577563	56598621	56588092	ENSG00000225657.2	+	lincRNA	KNOWN	RP5-843L14.1	2	6	0.059593
chr20	56601701	56602113	56601907	ENSG00000214541.3	+	processed_pseudogene	KNOWN	RPS4XP3	1	1	-0.010258
chr20	56629302	56639283	56634292	ENSG00000087510.6	+	protein_coding	KNOWN	TFAP2C	2	7	0.238302
chr20	56667430	56667531	56667480	ENSG00000252091.1	+	snRNA	KNOWN	RNU6-1146P	1	1	0.273104
chr20	56688401	56688695	56688548	ENSG00000241821.3	+	misc_RNA	KNOWN	RN7SL170P	1	1	0.432536
chr20	56700837	56701514	56701175	ENSG00000237000.1	-	processed_pseudogene	KNOWN	PTMAP6	1	2	0.232473
chr20	56718886	56718969	56718927	ENSG00000221416.1	+	miRNA	NOVEL	AL133232.1	1	1	0.358879
chr20	56730397	56731460	56730928	ENSG00000231604.2	+	lincRNA	KNOWN	RP5-897D18.1	1	2	0.013989
chr20	56785981	56786087	56786034	ENSG00000207158.1	-	snRNA	KNOWN	RNU6-929P	1	1	-0.010258
chr20	57000087	57000157	57000122	ENSG00000251772.1	+	miRNA	NOVEL	AL117380.2	1	1	0.062697
chr20	57054790	57054841	57054815	ENSG00000238644.1	+	miRNA	NOVEL	AL117380.1	1	1	0.056368
chr20	57105741	57107128	57106434	ENSG00000231078.1	+	lincRNA	KNOWN	RP11-560A15.4	1	3	0.321918
chr20	57114915	57122092	57118503	ENSG00000203266.2	+	lincRNA	KNOWN	RP11-560A15.3	1	3	0.395238
chr20	57161822	57163775	57162798	ENSG00000280220.1	+	TEC	KNOWN	RP11-560A15.6	1	1	0.117870
chr20	57168748	57266629	57217688	ENSG00000101144.12	-	protein_coding	KNOWN	BMP7	9	7	0.166103
chr20	57214872	57215866	57215369	ENSG00000235032.1	+	antisense	KNOWN	BMP7-AS1	1	2	0.112850
chr20	57266797	57282998	57274897	ENSG00000226308.1	+	lincRNA	KNOWN	RP4-813D12.3	2	3	0.119303
chr20	57311854	57311958	57311906	ENSG00000252064.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.001118
chr20	57321502	57321591	57321546	ENSG00000266666.1	-	miRNA	KNOWN	MIR4325	1	1	-0.001118
chr20	57328546	57328696	57328621	ENSG00000231005.1	+	processed_pseudogene	KNOWN	RP3-481F12.1	1	1	-0.001118
chr20	57329759	57343994	57336876	ENSG00000054796.12	+	protein_coding	KNOWN	SPO11	5	13	0.137444
chr20	57351010	57379211	57365110	ENSG00000101146.12	+	protein_coding	KNOWN	RAE1	9	12	0.051723
chr20	57357426	57358369	57357897	ENSG00000228995.1	-	processed_pseudogene	KNOWN	MTND1P9	1	1	0.015641
chr20	57358442	57359980	57359211	ENSG00000256222.2	-	protein_coding	KNOWN	MTRNR2L3	1	1	0.015641
chr20	57384160	57393062	57388611	ENSG00000218018.2	-	antisense	KNOWN	RP4-800J21.3	1	2	0.380833
chr20	57391407	57409333	57400370	ENSG00000132819.16	+	protein_coding	KNOWN	RBM38	5	5	0.866432
chr20	57488392	57489027	57488709	ENSG00000124097.7	-	processed_pseudogene	KNOWN	HMGB1P1	1	1	0.343828
chr20	57495966	57525652	57510809	ENSG00000124092.12	-	protein_coding	KNOWN	CTCFL	22	12	0.285798
chr20	57561080	57568112	57564596	ENSG00000124253.10	+	protein_coding	KNOWN	PCK1	6	10	0.128334
chr20	57599695	57601200	57600447	ENSG00000227297.1	-	lincRNA	KNOWN	RP4-718J7.4	1	2	0.456403
chr20	57603846	57620576	57612211	ENSG00000124256.14	-	protein_coding	KNOWN	ZBP1	9	8	0.536334
chr20	57648392	57711536	57679964	ENSG00000124225.15	-	protein_coding	KNOWN	PMEPA1	8	5	0.531976
chr20	57710183	57712780	57711481	ENSG00000278709.1	+	antisense	KNOWN	NKILA	2	2	0.638185
chr20	57895394	57895444	57895419	ENSG00000263453.1	+	miRNA	KNOWN	MIR4532	1	1	0.434273
chr20	57918884	57919035	57918959	ENSG00000221007.1	+	miRNA	NOVEL	AL354984.1	1	1	0.499761
chr20	57957126	57959660	57958393	ENSG00000203971.1	-	lincRNA	KNOWN	RP13-379L11.2	1	2	0.046188
chr20	57976018	57976093	57976055	ENSG00000221451.1	+	miRNA	NOVEL	AL354984.3	1	1	0.425548
chr20	58003904	58004648	58004276	ENSG00000275852.1	+	lincRNA	KNOWN	RP13-379L11.4	1	2	0.174849
chr20	58067456	58067607	58067531	ENSG00000221385.1	+	miRNA	NOVEL	AL354984.2	1	1	0.464718
chr20	58069054	58072070	58070562	ENSG00000225708.6	-	lincRNA	KNOWN	RP13-379L11.1	2	2	0.362253
chr20	58097267	58097591	58097429	ENSG00000270411.1	+	processed_pseudogene	KNOWN	RP13-379L11.3	1	1	0.314384
chr20	58150904	58161150	58156027	ENSG00000124237.5	+	protein_coding	KNOWN	C20orf85	1	4	0.239334
chr20	58218495	58228653	58223574	ENSG00000124227.5	-	protein_coding	KNOWN	ANKRD60	1	4	0.679831
chr20	58228940	58309439	58269189	ENSG00000124224.16	-	transcribed_unprocessed_pseudogene	KNOWN	PPP4R1L	10	18	0.245184
chr20	58309696	58367507	58338601	ENSG00000124209.3	+	protein_coding	KNOWN	RAB22A	2	7	0.391406
chr20	58389122	58451101	58420111	ENSG00000124164.15	+	protein_coding	KNOWN	VAPB	6	6	0.319309
chr20	58459101	58515131	58487116	ENSG00000198768.10	-	protein_coding	KNOWN	APCDD1L	3	4	0.350160
chr20	58515379	58619888	58567633	ENSG00000231290.5	+	processed_transcript	KNOWN	APCDD1L-AS1	8	7	0.587785
chr20	58594417	58603973	58599195	ENSG00000254620.1	+	lincRNA	KNOWN	RP5-907D15.3	1	2	0.812182
chr20	58605084	58605227	58605155	ENSG00000221174.1	+	miRNA	NOVEL	AL050327.1	1	1	0.812182
chr20	58634772	58635738	58635255	ENSG00000268941.2	+	lincRNA	KNOWN	RP5-907D15.4	1	1	1.027861
chr20	58651253	58679526	58665389	ENSG00000124222.21	+	protein_coding	KNOWN	STX16	21	12	0.400625
chr20	58651434	58715410	58683422	ENSG00000254995.4	+	protein_coding	KNOWN	STX16-NPEPL1	2	23	0.506056
chr20	58689131	58719238	58704184	ENSG00000215440.11	+	protein_coding	KNOWN	NPEPL1	9	13	0.730044
chr20	58710795	58711633	58711214	ENSG00000254419.1	+	sense_intronic	KNOWN	RP11-261P9.4	1	2	0.765631
chr20	58740532	58783821	58762176	ENSG00000237121.1	-	unprocessed_pseudogene	KNOWN	PIEZO1P2	1	14	0.261385
chr20	58754351	58756838	58755594	ENSG00000270279.1	+	lincRNA	KNOWN	RP4-806M20.5	1	3	0.511145
chr20	58817132	58817725	58817428	ENSG00000268649.3	-	lincRNA	KNOWN	RP4-806M20.4	1	1	0.325401
chr20	58817615	58817694	58817654	ENSG00000276373.1	-	miRNA	KNOWN	MIR296	1	1	0.325401
chr20	58818226	58818313	58818269	ENSG00000216031.1	-	miRNA	KNOWN	MIR298	1	1	0.325401
chr20	58818919	58850903	58834911	ENSG00000235590.7	-	antisense	KNOWN	GNAS-AS1	4	5	0.578998
chr20	58833809	58836529	58835169	ENSG00000268333.1	-	lincRNA	KNOWN	RP4-806M20.3	1	2	0.730066
chr20	58839718	58911192	58875455	ENSG00000087460.23	+	protein_coding	KNOWN	GNAS	57	14	0.348855
chr20	58842030	58842132	58842081	ENSG00000276859.1	+	misc_RNA	NOVEL	GNAS-AS1_1	1	1	0.730066
chr20	58842433	58842546	58842489	ENSG00000276722.1	+	misc_RNA	NOVEL	GNAS-AS1_2	1	1	0.730066
chr20	58850530	58850641	58850585	ENSG00000274491.1	+	misc_RNA	NOVEL	GNAS-AS1_4	1	1	0.345025
chr20	58850783	58850903	58850843	ENSG00000275069.1	+	misc_RNA	NOVEL	GNAS-AS1_5	1	1	0.345025
chr20	58863528	58888809	58876168	ENSG00000225806.7	-	antisense	KNOWN	RP1-309F20.3	3	5	0.273550
chr20	58876592	58876981	58876786	ENSG00000270951.1	-	antisense	KNOWN	RP1-309F20.4	1	1	0.248961
chr20	58981208	58995133	58988170	ENSG00000101158.12	+	protein_coding	KNOWN	NELFCD	14	18	0.211941
chr20	58995185	59007247	59001216	ENSG00000101160.13	-	protein_coding	KNOWN	CTSZ	4	6	0.620487
chr20	59019254	59026654	59022954	ENSG00000101162.3	+	protein_coding	KNOWN	TUBB1	1	4	0.918189
chr20	59025467	59032382	59028924	ENSG00000124172.9	-	protein_coding	KNOWN	ATP5E	3	3	0.681622
chr20	59033145	59042909	59038027	ENSG00000101166.15	-	protein_coding	KNOWN	PRELID3B	4	6	0.231717
chr20	59113224	59113631	59113427	ENSG00000232925.2	+	processed_pseudogene	KNOWN	MRPS16P2	1	1	0.099486
chr20	59123404	59147026	59135215	ENSG00000274961.1	+	lincRNA	KNOWN	RP3-492J12.2	1	2	0.025609
chr20	59191020	59259113	59225066	ENSG00000124203.5	+	protein_coding	KNOWN	ZNF831	1	5	0.055171
chr20	59300427	59325992	59313209	ENSG00000124205.15	+	protein_coding	KNOWN	EDN3	5	6	0.122586
chr20	59346379	59346480	59346429	ENSG00000263903.1	-	miRNA	NOVEL	AL035250.1	1	1	0.099187
chr20	59352195	59357774	59354984	ENSG00000225129.1	-	lincRNA	KNOWN	RP4-614C15.2	1	2	0.368953
chr20	59360927	59364773	59362850	ENSG00000230352.1	-	lincRNA	KNOWN	RP4-614C15.3	1	2	0.368953
chr20	59460619	59460837	59460728	ENSG00000233686.3	-	processed_pseudogene	KNOWN	PIEZO1P1	1	1	0.062992
chr20	59515191	59516039	59515615	ENSG00000227282.1	+	lincRNA	KNOWN	RP11-164D18.2	1	2	0.022867
chr20	59577509	59847711	59712610	ENSG00000087495.16	+	protein_coding	KNOWN	PHACTR3	9	13	0.167522
chr20	59626464	59628289	59627376	ENSG00000238194.1	-	antisense	KNOWN	RP4-719C8.1	2	2	0.204258
chr20	59852667	59852728	59852697	ENSG00000238777.1	-	snRNA	KNOWN	RNU7-141P	1	1	-0.525761
chr20	59863563	59933655	59898609	ENSG00000196074.12	-	protein_coding	KNOWN	SYCP2	9	45	-0.644642
chr20	59933764	59948680	59941222	ENSG00000196227.10	+	protein_coding	KNOWN	FAM217B	4	5	-0.081340
chr20	59936668	59940297	59938482	ENSG00000132825.6	-	protein_coding	KNOWN	PPP1R3D	1	1	-0.081340
chr20	59958427	60034011	59996219	ENSG00000124215.16	+	protein_coding	KNOWN	CDH26	7	18	0.192322
chr20	60055925	60072953	60064439	ENSG00000176659.7	+	lincRNA	KNOWN	C20orf197	1	4	0.460861
chr20	60083360	60083872	60083616	ENSG00000276093.1	-	lincRNA	KNOWN	RP5-1017F8.2	1	1	0.355026
chr20	60087840	60527458	60307649	ENSG00000228340.5	+	lincRNA	KNOWN	MIR646HG	11	8	0.007750
chr20	60308474	60308567	60308520	ENSG00000207802.1	+	miRNA	KNOWN	MIR646	1	1	0.230968
chr20	60414396	60414872	60414634	ENSG00000229690.1	-	processed_pseudogene	KNOWN	MTCO2P1	1	1	0.396385
chr20	60478111	60478181	60478146	ENSG00000266140.1	+	miRNA	KNOWN	MIR4533	1	1	0.021602
chr20	60564562	60564625	60564593	ENSG00000265617.1	+	miRNA	KNOWN	MIR548AG2	1	1	-0.236241
chr20	60761874	60767279	60764576	ENSG00000276627.1	+	lincRNA	KNOWN	RP5-1016A21.1	1	4	0.059570
chr20	60812004	60814211	60813107	ENSG00000261035.1	-	lincRNA	KNOWN	RP11-151E14.1	1	1	-0.173902
chr20	61077224	61077816	61077520	ENSG00000229755.1	-	lincRNA	KNOWN	RP5-827L5.2	1	2	0.132634
chr20	61079140	61080179	61079659	ENSG00000229606.1	+	lincRNA	KNOWN	RP5-827L5.1	1	2	0.132634
chr20	61252426	61940617	61596521	ENSG00000179242.15	+	protein_coding	KNOWN	CDH4	3	16	0.331080
chr20	61369879	61370855	61370367	ENSG00000276786.1	+	lincRNA	KNOWN	WI2-8325B5.1	1	1	0.128597
chr20	61434625	61437547	61436086	ENSG00000277270.1	-	lincRNA	KNOWN	RP5-827E24.1	3	2	0.091992
chr20	61717506	61719748	61718627	ENSG00000179253.3	-	antisense	KNOWN	RP11-429E11.3	1	2	0.352701
chr20	61738219	61755056	61746637	ENSG00000225106.1	-	antisense	KNOWN	RP11-429E11.2	2	3	0.549832
chr20	61953469	62065810	62009639	ENSG00000130699.16	-	protein_coding	KNOWN	TAF4	9	15	0.692534
chr20	61953546	61953662	61953604	ENSG00000221417.1	-	miRNA	KNOWN	MIR1257	1	1	0.673808
chr20	62037429	62037956	62037692	ENSG00000235018.1	-	processed_pseudogene	KNOWN	RP11-11M20.2	1	1	0.716952
chr20	62064802	62064885	62064843	ENSG00000265306.1	+	miRNA	KNOWN	MIR3195	1	1	0.652842
chr20	62066830	62068437	62067633	ENSG00000283078.1	+	lincRNA	KNOWN	RP11-11M20.4	1	1	0.652842
chr20	62122461	62135378	62128919	ENSG00000149657.19	+	protein_coding	KNOWN	LSM14B	5	9	0.571383
chr20	62136735	62143440	62140087	ENSG00000101182.14	-	protein_coding	KNOWN	PSMA7	6	7	0.635276
chr20	62143795	62182484	62163139	ENSG00000184402.14	+	protein_coding	KNOWN	SS18L1	5	11	0.722521
chr20	62183029	62203568	62193298	ENSG00000101181.17	+	protein_coding	KNOWN	MTG2	10	7	0.847298
chr20	62214970	62220267	62217618	ENSG00000101180.15	-	protein_coding	KNOWN	HRH3	3	5	1.196328
chr20	62231922	62296213	62264067	ENSG00000130703.15	+	protein_coding	KNOWN	OSBPL2	11	14	0.894728
chr20	62302093	62308862	62305477	ENSG00000130706.12	+	protein_coding	KNOWN	ADRM1	5	11	0.767989
chr20	62305432	62306325	62305878	ENSG00000226332.2	-	antisense	KNOWN	RP11-157P1.4	1	2	0.767989
chr20	62307955	62367312	62337633	ENSG00000130702.13	-	protein_coding	KNOWN	LAMA5	14	80	1.206361
chr20	62332487	62332557	62332522	ENSG00000265329.1	-	miRNA	KNOWN	MIR4758	1	1	1.227579
chr20	62352995	62356480	62354737	ENSG00000228812.7	+	antisense	KNOWN	LAMA5-AS1	4	3	1.145702
chr20	62386303	62386970	62386636	ENSG00000273619.1	-	antisense	KNOWN	RP5-908M14.9	1	1	1.253673
chr20	62387116	62388520	62387818	ENSG00000171858.17	+	protein_coding	KNOWN	RPS21	5	6	1.253673
chr20	62388632	62407285	62397958	ENSG00000149679.11	-	protein_coding	KNOWN	CABLES2	2	10	1.010427
chr20	62402236	62405935	62404085	ENSG00000275437.1	-	sense_intronic	KNOWN	RP5-908M14.10	1	1	0.991191
chr20	62410237	62427533	62418885	ENSG00000130701.3	-	protein_coding	KNOWN	RBBP8NL	1	14	1.019307
chr20	62427827	62447621	62437724	ENSG00000233017.2	+	antisense	KNOWN	RP5-908M14.5	4	4	0.859580
chr20	62463497	62475970	62469733	ENSG00000130700.6	-	protein_coding	KNOWN	GATA5	1	7	1.071051
chr20	62477870	62478594	62478232	ENSG00000272050.1	+	lincRNA	KNOWN	RP13-379O24.3	1	1	1.137506
chr20	62513909	62516096	62515002	ENSG00000260542.1	-	lincRNA	KNOWN	RP13-379O24.2	1	1	1.110975
chr20	62544343	62551526	62547934	ENSG00000174403.15	-	antisense	KNOWN	C20orf166-AS1	4	7	0.982545
chr20	62550453	62570764	62560608	ENSG00000174407.11	+	antisense	KNOWN	MIR1-1HG	2	4	0.902158
chr20	62554303	62554379	62554341	ENSG00000199017.1	+	miRNA	KNOWN	MIR1-1	1	1	0.915785
chr20	62564912	62565013	62564962	ENSG00000207764.1	+	miRNA	KNOWN	MIR133A2	1	1	0.915785
chr20	62572671	62573384	62573027	ENSG00000226094.1	+	processed_pseudogene	KNOWN	RPL7P3	1	1	0.553993
chr20	62575590	62577507	62576548	ENSG00000264490.3	+	lincRNA	KNOWN	WI2-87327B8.1	1	1	0.553993
chr20	62596732	62603115	62599923	ENSG00000273812.1	-	lincRNA	KNOWN	WI2-87327B8.2	1	2	0.694292
chr20	62633681	62635504	62634592	ENSG00000232121.1	-	antisense	KNOWN	RP13-30A9.1	1	4	0.971698
chr20	62633772	62635862	62634817	ENSG00000229882.1	+	antisense	KNOWN	RP13-30A9.2	1	2	0.971698
chr20	62640719	62643304	62642011	ENSG00000167046.4	-	antisense	KNOWN	RP11-93B14.6	1	2	0.971698
chr20	62642445	62685785	62664115	ENSG00000101187.15	+	protein_coding	KNOWN	SLCO4A1	9	12	0.899064
chr20	62648961	62650767	62649864	ENSG00000277496.1	-	antisense	KNOWN	RP11-93B14.9	1	1	0.887636
chr20	62651272	62652186	62651729	ENSG00000276317.1	-	antisense	KNOWN	RP11-93B14.10	1	2	0.774022
chr20	62663019	62666724	62664871	ENSG00000232803.1	-	antisense	KNOWN	SLCO4A1-AS1	3	4	0.774022
chr20	62695024	62700480	62697752	ENSG00000237687.2	-	lincRNA	KNOWN	LINC00686	1	2	1.017482
chr20	62708837	62762771	62735804	ENSG00000101188.4	+	protein_coding	KNOWN	NTSR1	2	4	0.928202
chr20	62732566	62735347	62733956	ENSG00000223669.1	-	antisense	KNOWN	RP11-93B14.4	1	2	1.000013
chr20	62774128	62775412	62774770	ENSG00000228705.1	-	antisense	KNOWN	LINC00659	1	2	1.041660
chr20	62796453	62801738	62799095	ENSG00000101189.6	+	protein_coding	KNOWN	MRGBP	1	5	0.904365
chr20	62800627	62805587	62803107	ENSG00000229873.1	-	antisense	KNOWN	OGFR-AS1	1	3	0.904365
chr20	62804835	62814000	62809417	ENSG00000060491.16	+	protein_coding	KNOWN	OGFR	4	13	1.111512
chr20	62816244	62841159	62828701	ENSG00000092758.15	+	protein_coding	KNOWN	COL9A3	14	32	1.350661
chr20	62841115	62861763	62851439	ENSG00000101190.12	-	protein_coding	KNOWN	TCFL5	2	6	1.086720
chr20	62845664	62845912	62845788	ENSG00000233838.5	+	processed_pseudogene	KNOWN	DPH3P1	1	1	1.315888
chr20	62872250	62873076	62872663	ENSG00000236527.1	-	processed_pseudogene	KNOWN	ARF4P2	1	2	0.574933
chr20	62877738	62937952	62907845	ENSG00000101191.16	-	protein_coding	KNOWN	DIDO1	7	16	0.755760
chr20	62928621	62929297	62928959	ENSG00000273759.1	-	lincRNA	KNOWN	RP4-563E14.1	1	1	0.796343
chr20	62938119	62948475	62943297	ENSG00000101193.7	+	protein_coding	KNOWN	GID8	2	5	1.087504
chr20	62952647	62969585	62961116	ENSG00000101194.17	+	protein_coding	KNOWN	SLC17A9	7	14	0.900485
chr20	63005927	63007035	63006481	ENSG00000125533.5	-	protein_coding	KNOWN	BHLHE23	2	1	0.929819
chr20	63009383	63085071	63047227	ENSG00000272259.5	+	lincRNA	KNOWN	RP11-305P22.9	2	4	0.961148
chr20	63034217	63037028	63035622	ENSG00000125514.9	-	lincRNA	KNOWN	LINC00029	3	4	1.120006
chr20	63038011	63053863	63045937	ENSG00000237119.1	+	lincRNA	KNOWN	LINC01056	1	6	1.071871
chr20	63095493	63102319	63098906	ENSG00000231133.6	-	lincRNA	KNOWN	HAR1B	2	3	0.985683
chr20	63102142	63102259	63102200	ENSG00000274915.1	+	misc_RNA	NOVEL	HAR1A	1	1	0.985683
chr20	63102205	63104386	63103295	ENSG00000225978.3	+	lincRNA	KNOWN	HAR1A	1	2	0.985683
chr20	63127495	63129459	63128477	ENSG00000260416.1	-	lincRNA	KNOWN	RP5-963E22.5	1	1	0.719574
chr20	63166797	63180903	63173850	ENSG00000231977.1	-	lincRNA	KNOWN	RP5-963E22.4	1	2	1.040171
chr20	63178500	63178586	63178543	ENSG00000207598.1	+	miRNA	KNOWN	MIR124-3	1	1	1.150544
chr20	63195429	63216234	63205831	ENSG00000149658.17	-	protein_coding	KNOWN	YTHDF1	2	5	0.924872
chr20	63218041	63218502	63218271	ENSG00000273821.1	+	lincRNA	KNOWN	RP5-963E22.6	1	1	0.684649
chr20	63235883	63240507	63238195	ENSG00000101197.12	+	protein_coding	KNOWN	BIRC7	3	7	1.055670
chr20	63238779	63238842	63238810	ENSG00000266463.1	+	miRNA	KNOWN	MIR3196	1	1	1.055670
chr20	63240784	63272694	63256739	ENSG00000101198.14	-	protein_coding	KNOWN	NKAIN4	9	7	1.209622
chr20	63253978	63261615	63257796	ENSG00000275620.1	+	antisense	KNOWN	FLJ16779	1	1	1.310337
chr20	63272785	63289793	63281289	ENSG00000101199.12	+	protein_coding	KNOWN	ARFGAP1	23	14	0.988614
chr20	63286808	63286866	63286837	ENSG00000266104.1	+	miRNA	KNOWN	MIR4326	1	1	0.988614
chr20	63293186	63334851	63314018	ENSG00000101203.16	+	protein_coding	KNOWN	COL20A1	8	36	1.341934
chr20	63337339	63337449	63337394	ENSG00000222439.1	+	snRNA	KNOWN	RNU6-994P	1	1	1.095928
chr20	63343223	63378401	63360812	ENSG00000101204.15	-	protein_coding	KNOWN	CHRNA4	14	7	1.069111
chr20	63359988	63371177	63365582	ENSG00000203900.2	+	antisense	KNOWN	RP11-261N11.8	2	5	1.054791
chr20	63400210	63472677	63436443	ENSG00000075043.17	-	protein_coding	KNOWN	KCNQ2	19	17	1.113292
chr20	63422269	63424555	63423412	ENSG00000280936.1	+	antisense	KNOWN	RP11-358D14.3	1	3	1.286903
chr20	63448051	63449329	63448690	ENSG00000226390.1	+	antisense	KNOWN	RP11-358D14.2	1	2	1.024878
chr20	63488013	63499315	63493664	ENSG00000101210.10	-	protein_coding	KNOWN	EEF1A2	2	8	1.256440
chr20	63502287	63505111	63503699	ENSG00000230226.1	+	antisense	KNOWN	RP4-697K14.3	1	2	1.238540
chr20	63520724	63522206	63521465	ENSG00000125534.9	+	protein_coding	KNOWN	PPDPF	4	4	1.166954
chr20	63528001	63537370	63532685	ENSG00000101213.6	-	protein_coding	KNOWN	PTK6	2	8	1.349927
chr20	63540810	63547504	63544157	ENSG00000125508.3	-	protein_coding	KNOWN	SRMS	1	8	1.399524
chr20	63543411	63543738	63543574	ENSG00000275812.1	+	antisense	KNOWN	RP4-697K14.15	1	1	1.399524
chr20	63547891	63556708	63552299	ENSG00000125531.6	+	protein_coding	KNOWN	C20orf195	4	2	1.383230
chr20	63558086	63574239	63566162	ENSG00000130589.16	-	protein_coding	KNOWN	HELZ2	6	19	1.408342
chr20	63587602	63627041	63607321	ENSG00000101216.10	-	protein_coding	KNOWN	GMEB2	3	10	1.199459
chr20	63627227	63628824	63628025	ENSG00000232442.1	+	antisense	KNOWN	CTD-3184A7.4	2	2	1.195703
chr20	63639705	63657682	63648693	ENSG00000197457.9	-	protein_coding	KNOWN	STMN3	5	5	1.150781
chr20	63657810	63696253	63677031	ENSG00000258366.7	+	protein_coding	KNOWN	RTEL1	11	35	1.512648
chr20	63659300	63698684	63678992	ENSG00000026036.21	+	protein_coding	KNOWN	RTEL1-TNFRSF6B	4	37	1.546787
chr20	63696668	63698684	63697676	ENSG00000243509.4	+	protein_coding	KNOWN	TNFRSF6B	1	3	1.888458
chr20	63698642	63708025	63703333	ENSG00000101246.19	-	protein_coding	KNOWN	ARFRP1	14	8	1.888458
chr20	63707465	63736142	63721803	ENSG00000197114.11	+	protein_coding	KNOWN	ZGPAT	11	7	1.333533
chr20	63708864	63739103	63723983	ENSG00000273154.3	+	protein_coding	KNOWN	RP4-583P15.15	3	11	1.306388
chr20	63730072	63730377	63730224	ENSG00000274501.1	-	antisense	KNOWN	RP4-583P15.16	1	1	1.318500
chr20	63736283	63739103	63737693	ENSG00000203896.9	+	protein_coding	KNOWN	LIME1	10	6	1.318500
chr20	63738270	63740398	63739334	ENSG00000273047.1	+	protein_coding	KNOWN	RP4-583P15.14	2	3	1.318500
chr20	63739861	63743505	63741683	ENSG00000125520.13	+	protein_coding	KNOWN	SLC2A4RG	8	8	1.318500
chr20	63743666	63831244	63787455	ENSG00000130584.10	-	protein_coding	KNOWN	ZBTB46	5	7	1.201151
chr20	63744689	63745958	63745323	ENSG00000229299.2	+	antisense	KNOWN	RP4-583P15.10	2	2	1.318500
chr20	63808076	63816521	63812298	ENSG00000231208.4	+	antisense	KNOWN	ZBTB46-AS1	1	3	1.172244
chr20	63843436	63843915	63843675	ENSG00000279610.1	-	TEC	KNOWN	C20orf181	1	1	1.151289
chr20	63861212	63864293	63862752	ENSG00000268858.2	-	antisense	KNOWN	RP4-591C20.9	1	1	1.197701
chr20	63861498	63862988	63862243	ENSG00000183260.7	+	protein_coding	KNOWN	ABHD16B	1	1	1.197701
chr20	63865228	63891545	63878386	ENSG00000101150.17	+	protein_coding	KNOWN	TPD52L2	10	9	1.465108
chr20	63895182	63936031	63915606	ENSG00000101152.10	+	protein_coding	KNOWN	DNAJC5	2	6	1.139001
chr20	63908955	63909119	63909037	ENSG00000199805.1	+	snRNA	KNOWN	RNU1-134P	1	1	1.382384
chr20	63919393	63919464	63919428	ENSG00000274555.1	+	miRNA	NOVEL	AL118506.2	1	1	0.980571
chr20	63919505	63919576	63919540	ENSG00000216141.3	+	miRNA	KNOWN	MIR941-3	1	1	0.980571
chr20	63919617	63919688	63919652	ENSG00000274277.1	+	miRNA	NOVEL	AL118506.1	1	1	0.980571
chr20	63919756	63919827	63919791	ENSG00000216195.3	+	miRNA	KNOWN	MIR941-4	1	1	0.980571
chr20	63919868	63919939	63919903	ENSG00000275842.1	+	miRNA	KNOWN	MIR941-5	1	1	0.980571
chr20	63920036	63920107	63920071	ENSG00000215946.3	+	miRNA	KNOWN	MIR941-1	1	1	0.980571
chr20	63939829	63956415	63948122	ENSG00000198276.13	-	protein_coding	KNOWN	UCKL1	7	15	1.130677
chr20	63941465	63941544	63941504	ENSG00000272045.1	-	miRNA	KNOWN	MIR1914	1	1	1.066457
chr20	63942631	63942726	63942678	ENSG00000207554.1	-	miRNA	KNOWN	MIR647	1	1	1.066457
chr20	63953384	63956985	63955184	ENSG00000280213.1	+	antisense	KNOWN	UCKL1-AS1	1	1	1.232473
chr20	63956702	64048758	64002730	ENSG00000196700.7	-	protein_coding	KNOWN	ZNF512B	3	17	1.175402
chr20	63974113	63980008	63977060	ENSG00000130590.13	-	protein_coding	KNOWN	SAMD10	4	6	1.287543
chr20	63981135	64033100	64007117	ENSG00000101161.7	+	protein_coding	KNOWN	PRPF6	1	21	1.118393
chr20	64034344	64039962	64037153	ENSG00000196421.7	+	lincRNA	KNOWN	LINC00176	4	4	1.236382
chr20	64047582	64049641	64048611	ENSG00000203883.6	-	protein_coding	KNOWN	SOX18	1	2	1.236382
chr20	64049836	64072347	64061091	ENSG00000171703.16	+	protein_coding	KNOWN	TCEA2	17	11	1.156523
chr20	64056803	64057084	64056943	ENSG00000237371.1	+	antisense	KNOWN	RP13-152O15.5	1	2	1.173716
chr20	64073181	64079988	64076584	ENSG00000171700.13	-	protein_coding	KNOWN	RGS19	4	6	1.004529
chr20	64076955	64077010	64076982	ENSG00000274034.1	-	miRNA	KNOWN	MIR6813	1	1	1.004529
chr20	64080173	64100643	64090408	ENSG00000125510.15	+	protein_coding	KNOWN	OPRL1	3	6	1.167630
chr20	64083380	64084359	64083869	ENSG00000171695.10	-	protein_coding	KNOWN	LKAAEAR1	2	3	1.004529
chr20	64105820	64107171	64106495	ENSG00000125522.3	-	protein_coding	KNOWN	NPBWR2	1	1	1.318196
chr20	64151791	64242253	64197022	ENSG00000196132.11	+	protein_coding	KNOWN	MYT1	5	23	0.666553
chr20	64255695	64287821	64271758	ENSG00000203880.11	+	protein_coding	KNOWN	PCMTD2	11	6	0.526245
chr20	64278306	64278561	64278433	ENSG00000278171.1	+	processed_pseudogene	KNOWN	RP11-476I15.5	1	1	0.498617
chr20	64290187	64292998	64291592	ENSG00000232852.1	-	processed_pseudogene	KNOWN	CICP4	1	1	0.473082
chr20	64290385	64313132	64301758	ENSG00000149656.8	+	lincRNA	KNOWN	LINC00266-1	3	3	0.403600
chr20	64327418	64327972	64327695	ENSG00000274727.1	-	processed_pseudogene	KNOWN	RP11-476I15.6	1	1	-0.031391
chr21	5011799	5017145	5014472	ENSG00000279493.1	+	protein_coding	KNOWN	CH507-9B2.2	1	4	0.894052
chr21	5022493	5040666	5031579	ENSG00000277117.4	+	protein_coding	KNOWN	CH507-9B2.1	5	7	0.639499
chr21	5073458	5087867	5080662	ENSG00000279687.1	+	antisense	KNOWN	CH507-9B2.8	1	2	0.796007
chr21	5079294	5128425	5103859	ENSG00000280071.3	-	protein_coding	KNOWN	CH507-9B2.3	11	7	0.961095
chr21	5116343	5133805	5125074	ENSG00000276612.3	-	protein_coding	KNOWN	CH507-9B2.4	1	7	0.925207
chr21	5130871	5154734	5142802	ENSG00000275464.3	-	protein_coding	KNOWN	CH507-9B2.5	9	21	0.990065
chr21	5155499	5165472	5160485	ENSG00000280433.1	-	protein_coding	KNOWN	CH507-9B2.9	2	3	0.877253
chr21	5232668	5243833	5238250	ENSG00000279669.1	-	lincRNA	KNOWN	RP11-717F1.1	1	2	-0.470352
chr21	5499151	5502542	5500846	ENSG00000279094.3	-	lincRNA	KNOWN	CH507-24F1.1	3	3	-1.560085
chr21	5553637	5614880	5584258	ENSG00000274333.4	+	lincRNA	KNOWN	RP11-717F1.2	13	5	-0.314330
chr21	5597390	5597490	5597440	ENSG00000277777.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.247214
chr21	5703182	5705637	5704409	ENSG00000279186.1	-	TEC	KNOWN	CH507-39O4.3	1	1	-0.096710
chr21	5705345	5707160	5706252	ENSG00000279784.1	+	lincRNA	KNOWN	CH507-39O4.1	1	2	-0.096710
chr21	5707004	5709456	5708230	ENSG00000279064.1	-	lincRNA	KNOWN	CH507-39O4.2	1	2	-0.096710
chr21	5972956	5973333	5973144	ENSG00000274559.2	-	processed_pseudogene	KNOWN	CH507-42P11.1	1	1	0.391552
chr21	6008604	6008810	6008707	ENSG00000280013.1	+	processed_pseudogene	KNOWN	CH507-42P11.2	1	1	0.107759
chr21	6034690	6036093	6035391	ENSG00000279769.1	+	TEC	KNOWN	CH507-42P11.3	1	1	1.043629
chr21	6060340	6076305	6068322	ENSG00000280191.3	+	lincRNA	KNOWN	CH507-42P11.5	5	4	1.070043
chr21	6081193	6082585	6081889	ENSG00000280095.1	+	lincRNA	KNOWN	CH507-42P11.7	1	2	0.945150
chr21	6084364	6091407	6087885	ENSG00000280179.1	-	lincRNA	KNOWN	CH507-42P11.6	2	4	0.997287
chr21	6111134	6123739	6117436	ENSG00000275993.2	+	protein_coding	KNOWN	CH507-42P11.8	2	14	1.016264
chr21	6223480	6223580	6223530	ENSG00000274790.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.044374
chr21	6228966	6267317	6248141	ENSG00000275496.4	-	lincRNA	KNOWN	CH507-24F1.2	7	4	-0.369367
chr21	6272135	6276532	6274333	ENSG00000280019.1	-	unprocessed_pseudogene	KNOWN	CH507-145C22.2	1	10	-0.137639
chr21	6309161	6312948	6311054	ENSG00000279709.1	+	unprocessed_pseudogene	KNOWN	CH507-254M2.4	1	6	-0.286094
chr21	6318434	6360415	6339424	ENSG00000278903.3	+	lincRNA	KNOWN	CH507-145C22.1	5	4	-0.363627
chr21	6365955	6366055	6366005	ENSG00000276902.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.343427
chr21	6441320	6441419	6441369	ENSG00000278014.1	-	miRNA	NOVEL	FP236240.2	1	1	1.028798
chr21	6444869	6468040	6456454	ENSG00000274276.4	-	protein_coding	KNOWN	CBSL	10	18	1.188577
chr21	6484623	6499261	6491942	ENSG00000275895.4	-	protein_coding	KNOWN	U2AF1L5	5	9	0.640028
chr21	6507017	6507389	6507203	ENSG00000280346.1	-	processed_pseudogene	KNOWN	CH507-152C13.4	1	1	0.461748
chr21	6519205	6519304	6519254	ENSG00000277798.1	+	miRNA	NOVEL	FP236240.1	1	1	-0.007544
chr21	6520344	6520670	6520507	ENSG00000279226.1	-	TEC	KNOWN	CH507-152C13.5	1	1	-0.007544
chr21	6550749	6553955	6552352	ENSG00000278927.1	-	lincRNA	KNOWN	CH507-152C13.6	1	3	0.941851
chr21	6560714	6564489	6562601	ENSG00000276076.4	+	protein_coding	KNOWN	CH507-152C13.3	4	3	0.941851
chr21	6630182	6670695	6650438	ENSG00000280145.3	-	lincRNA	KNOWN	CH507-154B10.1	8	4	-0.346102
chr21	6667304	6670667	6668985	ENSG00000278878.1	-	lincRNA	KNOWN	CH507-145C22.3	2	3	-0.288834
chr21	6676178	6679962	6678070	ENSG00000279788.1	-	unprocessed_pseudogene	KNOWN	CH507-154B10.3	1	9	-0.034117
chr21	6712596	6716361	6714478	ENSG00000279728.1	+	unprocessed_pseudogene	KNOWN	CH507-236L23.5	1	8	-0.190816
chr21	6721812	6725209	6723510	ENSG00000280164.1	+	lincRNA	KNOWN	CH507-254M2.3	1	3	-0.190816
chr21	6789592	6812297	6800944	ENSG00000279998.1	+	lincRNA	KNOWN	CH507-210P18.1	1	3	-0.325993
chr21	6858539	6897263	6877901	ENSG00000278955.1	+	lincRNA	KNOWN	CH507-210P18.4	1	3	-0.333164
chr21	6859171	6859256	6859213	ENSG00000275507.1	+	miRNA	KNOWN	MIR8069-1	1	1	0.041806
chr21	6897291	6899280	6898285	ENSG00000280172.1	+	processed_pseudogene	KNOWN	CH507-210P18.3	1	1	-0.381939
chr21	6904884	6906692	6905788	ENSG00000279751.1	+	lincRNA	KNOWN	CH507-210P18.5	1	2	-0.381939
chr21	6986450	6997765	6992107	ENSG00000280018.3	-	lincRNA	KNOWN	CH507-154B10.2	3	5	-0.183632
chr21	6994374	6997737	6996055	ENSG00000279313.1	-	lincRNA	KNOWN	CH507-145C22.4	1	3	-0.267551
chr21	7003248	7007022	7005135	ENSG00000279477.1	-	unprocessed_pseudogene	KNOWN	CH507-236L23.4	1	9	-0.267551
chr21	7020599	7025166	7022882	ENSG00000278884.1	+	lincRNA	KNOWN	CH507-236L23.1	1	2	0.021602
chr21	7048891	7087229	7068060	ENSG00000277067.4	+	lincRNA	KNOWN	CH507-254M2.1	6	4	-0.122993
chr21	7092616	7092716	7092666	ENSG00000274046.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.290478
chr21	7129103	7130287	7129695	ENSG00000280330.1	+	processed_pseudogene	KNOWN	CH507-236L23.2	1	1	-0.398898
chr21	7135334	7137789	7136561	ENSG00000279303.1	-	TEC	KNOWN	CH507-236L23.3	1	1	-0.575433
chr21	7385058	7388799	7386928	ENSG00000279647.1	-	unprocessed_pseudogene	KNOWN	CH507-254M2.5	1	9	-0.007544
chr21	7421442	7425839	7423640	ENSG00000279895.1	-	unprocessed_pseudogene	KNOWN	CH507-254M2.6	1	10	-0.224341
chr21	7430659	7469007	7449833	ENSG00000276077.4	+	lincRNA	KNOWN	CH507-254M2.2	7	4	-0.175265
chr21	7474394	7474494	7474444	ENSG00000274484.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.319434
chr21	7626344	7627528	7626936	ENSG00000279177.1	-	processed_pseudogene	KNOWN	CH507-338C24.2	1	1	-0.332506
chr21	7663911	7664011	7663961	ENSG00000276546.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.049764
chr21	7669397	7681742	7675569	ENSG00000277991.4	-	lincRNA	KNOWN	CH507-338C24.1	8	4	-0.455410
chr21	7744962	7777853	7761407	ENSG00000273590.4	+	protein_coding	KNOWN	SMIM11B	7	5	0.472916
chr21	7769796	7770546	7770171	ENSG00000277277.2	-	processed_pseudogene	KNOWN	CH507-396I9.7	1	1	0.632278
chr21	7788703	7793954	7791328	ENSG00000278961.1	-	lincRNA	KNOWN	CH507-396I9.3	1	2	0.267865
chr21	7816675	7829926	7823300	ENSG00000276289.4	-	protein_coding	KNOWN	CH507-396I9.6	4	3	0.224442
chr21	7826098	7826225	7826161	ENSG00000273614.1	-	snoRNA	NOVEL	SNORA11	1	1	0.224442
chr21	8101251	8103706	8102478	ENSG00000279967.1	-	TEC	KNOWN	CH507-338C24.3	1	1	0.000000
chr21	8197620	8227646	8212633	ENSG00000278996.1	+	lincRNA	KNOWN	CH507-513H4.1	1	7	0.156712
chr21	8201210	8201287	8201248	ENSG00000275279.1	+	miRNA	NOVEL	FP671120.3	1	1	-0.185072
chr21	8205315	8205406	8205360	ENSG00000275950.1	+	miRNA	KNOWN	MIR6724-1	1	1	-0.185072
chr21	8205851	8205940	8205895	ENSG00000275664.1	+	misc_RNA	NOVEL	pRNA	1	1	-0.185072
chr21	8208012	8208125	8208068	ENSG00000275252.1	+	miRNA	NOVEL	FP671120.2	1	1	-0.185072
chr21	8208473	8208652	8208562	ENSG00000275708.1	+	miRNA	KNOWN	MIR3648-1	1	1	-0.185072
chr21	8208844	8208904	8208874	ENSG00000277437.1	+	miRNA	KNOWN	MIR3687-1	1	1	-0.185072
chr21	8210384	8211306	8210845	ENSG00000280800.1	-	lincRNA	KNOWN	CH507-513H4.6	1	1	0.396467
chr21	8212572	8212724	8212648	ENSG00000278233.1	+	rRNA	KNOWN	RNA5-8S5	1	1	0.396467
chr21	8217953	8218001	8217977	ENSG00000278597.1	+	miRNA	NOVEL	FP671120.7	1	1	0.396467
chr21	8218721	8218776	8218748	ENSG00000275530.1	+	miRNA	NOVEL	FP671120.4	1	1	0.396467
chr21	8249505	8249596	8249550	ENSG00000274060.1	+	miRNA	KNOWN	MIR6724-2	1	1	0.077825
chr21	8250060	8250149	8250104	ENSG00000277671.1	+	misc_RNA	NOVEL	pRNA	1	1	0.167374
chr21	8252221	8252334	8252277	ENSG00000276104.1	+	miRNA	NOVEL	FP671120.5	1	1	0.167374
chr21	8253050	8253109	8253079	ENSG00000274426.1	+	miRNA	NOVEL	FP671120.1	1	1	0.167374
chr21	8254592	8255514	8255053	ENSG00000281383.1	-	lincRNA	KNOWN	CH507-513H4.5	1	1	0.167374
chr21	8256781	8256933	8256857	ENSG00000277739.1	+	rRNA	KNOWN	RNA5-8S5	1	1	0.167374
chr21	8258914	8259005	8258959	ENSG00000278047.1	+	miRNA	NOVEL	FP671120.6	1	1	0.167374
chr21	8380665	8410645	8395655	ENSG00000280441.2	+	lincRNA	KNOWN	CH507-528H12.1	1	7	0.223742
chr21	8384256	8384333	8384294	ENSG00000274725.1	+	miRNA	NOVEL	FP236383.2	1	1	-0.212014
chr21	8388362	8388453	8388407	ENSG00000277379.1	+	miRNA	KNOWN	MIR6724-3	1	1	-0.212014
chr21	8388898	8388987	8388942	ENSG00000274868.1	+	misc_RNA	NOVEL	pRNA	1	1	-0.212014
chr21	8391059	8391172	8391115	ENSG00000276796.1	+	miRNA	NOVEL	FP236383.8	1	1	0.430183
chr21	8391520	8391697	8391608	ENSG00000276322.1	+	miRNA	NOVEL	FP236383.6	1	1	0.430183
chr21	8391884	8391943	8391913	ENSG00000277244.1	+	miRNA	NOVEL	FP236383.11	1	1	0.430183
chr21	8393419	8394341	8393880	ENSG00000280614.1	-	lincRNA	KNOWN	CH507-513H4.4	1	1	0.430183
chr21	8395607	8395759	8395683	ENSG00000275215.1	+	rRNA	KNOWN	RNA5-8S5	1	1	0.430183
chr21	8400991	8401039	8401015	ENSG00000275209.1	+	miRNA	NOVEL	FP236383.4	1	1	0.430183
chr21	8401760	8401816	8401788	ENSG00000277105.1	+	miRNA	NOVEL	FP236383.10	1	1	0.430183
chr21	8432530	8432621	8432575	ENSG00000275692.1	+	miRNA	KNOWN	MIR6724-4	1	1	0.155157
chr21	8433085	8433174	8433129	ENSG00000278775.1	+	misc_RNA	NOVEL	pRNA	1	1	0.155157
chr21	8435246	8435359	8435302	ENSG00000276737.1	+	miRNA	NOVEL	FP236383.7	1	1	0.155157
chr21	8435707	8435886	8435796	ENSG00000275783.1	+	miRNA	NOVEL	FP236383.5	1	1	0.155157
chr21	8436078	8436138	8436108	ENSG00000274519.1	+	miRNA	NOVEL	FP236383.1	1	1	0.155157
chr21	8437629	8438551	8438090	ENSG00000281181.1	-	lincRNA	KNOWN	CH507-513H4.3	1	1	0.155157
chr21	8439823	8439975	8439899	ENSG00000278189.1	+	rRNA	KNOWN	RNA5-8S5	1	1	0.155157
chr21	8441949	8442040	8441994	ENSG00000276924.1	+	miRNA	NOVEL	FP236383.9	1	1	0.155157
chr21	8445223	8445271	8445247	ENSG00000277644.1	+	miRNA	NOVEL	FP236383.12	1	1	0.155157
chr21	8445991	8446046	8446018	ENSG00000274735.1	+	miRNA	NOVEL	FP236383.3	1	1	0.155157
chr21	8603547	8603984	8603765	ENSG00000279990.1	+	processed_pseudogene	KNOWN	RPSAP68	1	1	-0.490957
chr21	8680538	8680934	8680736	ENSG00000279615.1	-	processed_pseudogene	KNOWN	bP-2168N6.1	1	1	-0.415803
chr21	8701461	8701562	8701511	ENSG00000279167.1	+	processed_pseudogene	KNOWN	bP-2168N6.3	1	1	-0.534912
chr21	8759077	8761335	8760206	ENSG00000279579.3	+	lincRNA	KNOWN	bP-2189O9.3	2	2	-0.596064
chr21	8794358	8794439	8794398	ENSG00000238411.1	+	miRNA	NOVEL	CR381670.1	1	1	-0.327911
chr21	8801362	8801880	8801621	ENSG00000279213.1	-	processed_pseudogene	KNOWN	SNX18P10	1	1	-0.327911
chr21	8845566	8846646	8846106	ENSG00000280243.1	+	processed_pseudogene	KNOWN	MTCO1P1	1	1	-0.573272
chr21	8857260	8880976	8869118	ENSG00000278931.1	+	unprocessed_pseudogene	KNOWN	bP-2189O9.2	1	9	-0.527193
chr21	8986999	8987178	8987088	ENSG00000264462.1	+	miRNA	KNOWN	MIR3648-2	1	1	0.000000
chr21	8987370	8987430	8987400	ENSG00000264063.1	+	miRNA	KNOWN	MIR3687-2	1	1	0.000000
chr21	8996496	9018670	9007583	ENSG00000279501.1	-	lincRNA	KNOWN	bP-2171C21.3	1	2	-0.108798
chr21	9026821	9027329	9027075	ENSG00000279414.1	-	processed_pseudogene	KNOWN	bP-2171C21.4	1	1	-0.335852
chr21	9053122	9059060	9056091	ENSG00000280436.1	+	unprocessed_pseudogene	KNOWN	bP-2171C21.2	1	2	-0.406814
chr21	9068361	9129752	9099056	ENSG00000188681.11	-	transcribed_unprocessed_pseudogene	KNOWN	TEKT4P2	2	6	-0.124538
chr21	9082601	9083101	9082851	ENSG00000279720.1	-	processed_pseudogene	KNOWN	bP-2171C21.6	1	1	0.074246
chr21	9088188	9088391	9088289	ENSG00000279381.1	+	processed_pseudogene	KNOWN	bP-2171C21.5	1	1	0.074246
chr21	9098863	9098944	9098903	ENSG00000239179.1	-	miRNA	NOVEL	CR392039.2	1	1	-0.080810
chr21	9099103	9099185	9099144	ENSG00000239107.1	-	miRNA	NOVEL	CR392039.1	1	1	-0.080810
chr21	9325013	9368775	9346894	ENSG00000278932.3	+	lincRNA	KNOWN	bP-21264C1.2	6	6	-0.250948
chr21	9364467	9365225	9364846	ENSG00000279718.1	-	processed_pseudogene	KNOWN	SNX18P12	1	1	-0.198579
chr21	9369285	9376645	9372965	ENSG00000279208.1	-	unprocessed_pseudogene	KNOWN	bP-21264C1.1	1	4	-0.340157
chr21	9553503	9553572	9553537	ENSG00000277827.1	+	miRNA	NOVEL	AC124864.1	1	1	-0.490035
chr21	9558970	9559155	9559062	ENSG00000279864.1	+	processed_pseudogene	KNOWN	RP11-570J4.1	1	1	-0.490035
chr21	9580024	9580415	9580219	ENSG00000279211.1	-	processed_pseudogene	KNOWN	RP11-570J4.2	1	1	-0.214465
chr21	9646825	9647000	9646912	ENSG00000275631.1	+	snRNA	NOVEL	U1	1	1	-0.384779
chr21	9781918	9814009	9797963	ENSG00000280081.3	-	lincRNA	KNOWN	MGC39584	3	6	-0.316406
chr21	9810381	9810503	9810442	ENSG00000280075.1	-	processed_pseudogene	KNOWN	RP11-555K2.1	1	1	0.185605
chr21	9810501	9810848	9810674	ENSG00000279783.1	+	processed_pseudogene	KNOWN	RP11-555K2.2	1	1	0.185605
chr21	9902344	9902627	9902485	ENSG00000264002.2	-	misc_RNA	KNOWN	RN7SL52P	1	1	-0.955487
chr21	9907916	9908010	9907963	ENSG00000252199.1	+	snoRNA	NOVEL	SNORA70	1	1	-0.955487
chr21	9913117	9914846	9913981	ENSG00000279321.1	+	lincRNA	KNOWN	RP11-555K2.4	2	3	-0.692086
chr21	9975017	10119309	10047163	ENSG00000270533.2	-	transcribed_processed_pseudogene	KNOWN	bP-21201H5.1	2	11	-0.792805
chr21	10028361	10029855	10029108	ENSG00000280372.1	-	TEC	KNOWN	bP-21201H5.2	1	1	-0.758917
chr21	10122273	10129029	10125651	ENSG00000279851.2	+	lincRNA	KNOWN	CH507-216K13.2	1	2	-0.554992
chr21	10136419	10137004	10136711	ENSG00000279062.1	+	unprocessed_pseudogene	KNOWN	CH507-216K13.1	1	1	0.097821
chr21	10328411	10342737	10335574	ENSG00000277693.1	-	lincRNA	KNOWN	AP003900.6	2	4	-0.255991
chr21	10330732	10331537	10331134	ENSG00000275945.1	+	processed_pseudogene	KNOWN	EIF3FP1	1	1	-0.287904
chr21	10357400	10358620	10358010	ENSG00000275592.1	+	processed_pseudogene	KNOWN	VN1R7P	1	2	-0.168855
chr21	10397644	10397778	10397711	ENSG00000278106.1	+	unprocessed_pseudogene	KNOWN	RP11-589M2.1	1	1	-0.171043
chr21	10413477	10516431	10464954	ENSG00000187172.15	+	transcribed_unprocessed_pseudogene	KNOWN	BAGE2	3	15	-0.579174
chr21	10460442	10460546	10460494	ENSG00000277137.1	+	miRNA	NOVEL	AF254983.1	1	1	-0.672685
chr21	10482738	10605716	10544227	ENSG00000273840.1	+	processed_transcript	KNOWN	AL078471.5	1	32	-0.618323
chr21	10521553	10606140	10563846	ENSG00000274391.4	+	protein_coding	KNOWN	TPTE	5	24	-0.556240
chr21	10576292	10576587	10576439	ENSG00000278678.1	+	processed_pseudogene	KNOWN	CYCSP41	1	1	-0.364386
chr21	10612455	10613379	10612917	ENSG00000273872.1	-	unprocessed_pseudogene	KNOWN	SLC25A15P4	1	2	-0.417824
chr21	10640028	10640338	10640183	ENSG00000276556.1	-	unprocessed_pseudogene	KNOWN	AF254982.2	1	1	-0.384075
chr21	10649400	10649835	10649617	ENSG00000277282.1	-	IG_V_gene	KNOWN	IGHV1OR21-1	1	2	-0.384075
chr21	12999676	13016692	13008184	ENSG00000229306.1	-	lincRNA	KNOWN	AP001464.4	1	2	-0.186696
chr21	13038160	13067033	13052596	ENSG00000224309.7	+	transcribed_unprocessed_pseudogene	KNOWN	ANKRD30BP2	4	11	-0.599801
chr21	13047583	13047689	13047636	ENSG00000207097.1	+	snRNA	KNOWN	RNU6-614P	1	1	-0.462597
chr21	13095305	13113790	13104547	ENSG00000168122.4	-	unprocessed_pseudogene	KNOWN	ZNF355P	1	3	-1.101839
chr21	13120244	13120807	13120525	ENSG00000237202.1	+	processed_pseudogene	KNOWN	AJ239321.3	1	1	-0.508078
chr21	13305171	13314664	13309917	ENSG00000280108.1	+	protein_coding	KNOWN	AJ239318.1	1	2	-0.619989
chr21	13349265	13350648	13349956	ENSG00000185390.2	+	unprocessed_pseudogene	KNOWN	FGF7P2	1	2	-0.377176
chr21	13384249	13427773	13406011	ENSG00000175302.5	-	unprocessed_pseudogene	KNOWN	ANKRD30BP1	1	18	-0.530832
chr21	13406384	13406460	13406422	ENSG00000266211.1	-	miRNA	KNOWN	MIR3156-3	1	1	-0.599170
chr21	13443373	13489176	13466274	ENSG00000226930.1	-	unprocessed_pseudogene	KNOWN	GTF2IP2	1	6	-0.394594
chr21	13476371	13477263	13476817	ENSG00000219280.1	+	processed_pseudogene	KNOWN	VN1R8P	1	1	-0.404161
chr21	13525599	13528579	13527089	ENSG00000228184.1	+	processed_pseudogene	KNOWN	SNX19P1	1	1	-0.366373
chr21	13544282	13545185	13544733	ENSG00000179381.7	-	processed_pseudogene	KNOWN	OR4K11P	1	1	-0.378638
chr21	13546033	13558461	13552247	ENSG00000228159.1	+	lincRNA	KNOWN	AP001465.5	1	4	-0.568636
chr21	13581044	13582004	13581524	ENSG00000218549.1	-	processed_pseudogene	KNOWN	OR4K12P	1	1	-0.715363
chr21	13609858	13641585	13625721	ENSG00000166351.10	+	protein_coding	KNOWN	POTED	2	11	-0.428180
chr21	13621577	13621683	13621630	ENSG00000207476.1	+	snRNA	KNOWN	RNU6-286P	1	1	-0.386662
chr21	13644775	13644850	13644812	ENSG00000266299.1	-	miRNA	KNOWN	MIR3118-1	1	1	-0.497543
chr21	13654073	13654356	13654214	ENSG00000278381.1	+	processed_pseudogene	KNOWN	AL050303.11	1	1	-0.086811
chr21	13665868	13667546	13666707	ENSG00000227874.1	-	processed_pseudogene	KNOWN	GRAMD4P1	1	2	-0.086811
chr21	13676022	13677116	13676569	ENSG00000214319.2	+	processed_pseudogene	KNOWN	CXADRP1	1	1	-0.596064
chr21	13679300	13681138	13680219	ENSG00000279773.1	-	TEC	KNOWN	AL050303.10	1	1	-0.596064
chr21	13704853	13705518	13705185	ENSG00000273692.1	+	processed_pseudogene	KNOWN	AL050303.12	1	1	-0.226184
chr21	13724189	13724274	13724231	ENSG00000278618.1	+	miRNA	KNOWN	MIR8069-2	1	1	-0.573141
chr21	13762338	13764332	13763335	ENSG00000229231.1	+	processed_pseudogene	KNOWN	FEM1AP1	1	1	-0.480587
chr21	13769932	13771740	13770836	ENSG00000224922.1	+	lincRNA	KNOWN	AL050303.7	1	2	-0.177471
chr21	13776086	13777266	13776676	ENSG00000173231.6	+	processed_pseudogene	KNOWN	TERF1P1	1	1	-0.165806
chr21	13792635	13793141	13792888	ENSG00000232797.1	+	processed_pseudogene	KNOWN	FAM207CP	1	1	-0.475483
chr21	13824406	13825635	13825020	ENSG00000224860.1	-	processed_pseudogene	KNOWN	GXYLT1P2	1	1	-0.211915
chr21	13826696	13827627	13827161	ENSG00000215562.2	+	processed_pseudogene	KNOWN	CNN2P7	1	1	-0.211915
chr21	13839118	13839409	13839263	ENSG00000234538.1	+	processed_pseudogene	KNOWN	ZNF114P1	1	1	-0.214255
chr21	13843133	13848364	13845748	ENSG00000228314.1	-	transcribed_unprocessed_pseudogene	KNOWN	CYP4F29P	3	6	-0.214255
chr21	13905960	13906488	13906224	ENSG00000230965.1	-	processed_pseudogene	KNOWN	SNX18P13	1	1	-0.447167
chr21	13909574	13980437	13945005	ENSG00000215559.8	-	transcribed_unprocessed_pseudogene	KNOWN	ANKRD20A11P	6	25	-0.352235
chr21	13936993	13937325	13937159	ENSG00000203616.2	-	processed_pseudogene	KNOWN	RHOT1P2	1	1	-0.388813
chr21	13968489	13968595	13968542	ENSG00000223287.1	-	snRNA	KNOWN	RNU6-954P	1	1	-0.527736
chr21	13985447	13985519	13985483	ENSG00000266838.1	+	miRNA	NOVEL	AP001634.1	1	1	-0.358670
chr21	14000927	14005279	14003103	ENSG00000183249.8	+	unprocessed_pseudogene	KNOWN	NF1P3	1	4	-0.141599
chr21	14007134	14014880	14011007	ENSG00000233442.2	+	unprocessed_pseudogene	KNOWN	PPP6R2P1	1	11	0.000745
chr21	14019060	14020725	14019892	ENSG00000275170.1	-	processed_pseudogene	KNOWN	FRG2MP	1	4	0.084297
chr21	14027421	14144468	14085944	ENSG00000224905.6	+	antisense	KNOWN	AP001347.6	3	3	-0.033943
chr21	14064325	14069087	14066706	ENSG00000249493.1	+	unprocessed_pseudogene	KNOWN	ANKRD20A18P	1	3	-0.164784
chr21	14070871	14070986	14070928	ENSG00000201812.1	+	rRNA	KNOWN	RNA5SP488	1	1	0.059751
chr21	14075950	14076038	14075994	ENSG00000277572.1	-	misc_RNA	NOVEL	pRNA	1	1	0.059751
chr21	14108813	14210891	14159852	ENSG00000188992.11	-	protein_coding	KNOWN	LIPI	4	10	-0.430632
chr21	14143581	14144158	14143869	ENSG00000240755.1	+	processed_pseudogene	KNOWN	ERLEC1P1	1	1	-0.356993
chr21	14216130	14228372	14222251	ENSG00000185272.13	+	protein_coding	KNOWN	RBM11	6	5	-0.418492
chr21	14236206	14362754	14299480	ENSG00000243064.8	+	transcribed_unprocessed_pseudogene	KNOWN	ABCC13	6	28	-0.483399
chr21	14371115	14383484	14377299	ENSG00000155304.5	-	protein_coding	KNOWN	HSPA13	2	5	-0.270578
chr21	14485228	14583402	14534315	ENSG00000155307.17	-	protein_coding	KNOWN	SAMSN1	6	9	-0.464715
chr21	14582202	14598303	14590252	ENSG00000223662.1	+	antisense	KNOWN	SAMSN1-AS1	1	5	-0.518042
chr21	14591930	14658821	14625375	ENSG00000243440.6	-	protein_coding	KNOWN	AF165138.7	4	7	-0.509483
chr21	14746762	14753863	14750312	ENSG00000232884.7	-	lincRNA	KNOWN	AF127936.3	2	3	-0.474137
chr21	14757588	14758352	14757970	ENSG00000228600.1	+	processed_pseudogene	KNOWN	POLR2CP	1	1	-0.415948
chr21	14761710	14763090	14762400	ENSG00000226751.2	-	lincRNA	KNOWN	AF127936.5	1	2	-0.415948
chr21	14774301	14775262	14774781	ENSG00000225502.2	+	processed_pseudogene	KNOWN	GAPDHP16	1	1	-0.271820
chr21	14818843	15014430	14916636	ENSG00000235609.7	-	lincRNA	KNOWN	AF127936.9	1	4	-0.114332
chr21	14819699	14918552	14869125	ENSG00000281903.2	-	lincRNA	KNOWN	AF127936.7	7	6	-0.184816
chr21	14829154	14829989	14829571	ENSG00000226406.1	-	processed_pseudogene	KNOWN	RBMX2P1	1	1	-0.353952
chr21	14918534	14947096	14932815	ENSG00000235277.1	+	antisense	KNOWN	AF127577.8	1	2	-0.059176
chr21	14961235	15065000	15013117	ENSG00000180530.9	-	protein_coding	KNOWN	NRIP1	4	4	-0.024316
chr21	14961309	14964233	14962771	ENSG00000229047.1	+	antisense	KNOWN	AF127577.10	1	2	0.067744
chr21	14971470	14992854	14982162	ENSG00000231201.1	+	antisense	KNOWN	AF127577.11	1	3	-0.143771
chr21	15050189	15052379	15051284	ENSG00000279390.1	+	TEC	KNOWN	AF127577.13	1	1	-0.165609
chr21	15067070	15067837	15067453	ENSG00000236471.1	+	lincRNA	KNOWN	AF127577.12	1	2	-0.165609
chr21	15346652	15346738	15346695	ENSG00000280082.1	+	TEC	KNOWN	AF246928.1	1	1	-0.302726
chr21	15370500	15627342	15498921	ENSG00000229425.2	-	lincRNA	KNOWN	AJ006998.2	10	12	-0.358016
chr21	15490530	15490767	15490648	ENSG00000224524.1	-	processed_pseudogene	KNOWN	CYCSP42	1	1	-0.419348
chr21	15493932	15496124	15495028	ENSG00000224247.1	-	lincRNA	KNOWN	AJ009632.3	1	2	-0.419348
chr21	15614283	15614389	15614336	ENSG00000212564.1	+	snRNA	KNOWN	RNU6-1326P	1	1	-0.370535
chr21	15693208	15693303	15693255	ENSG00000221497.1	+	miRNA	NOVEL	AL034449.1	1	1	-0.357619
chr21	15694300	15696581	15695440	ENSG00000226298.1	-	processed_pseudogene	KNOWN	RAD23BLP	1	2	-0.357619
chr21	15730025	15880069	15805047	ENSG00000155313.15	+	protein_coding	KNOWN	USP25	10	26	-0.365375
chr21	15744004	15745080	15744542	ENSG00000234159.1	-	processed_pseudogene	KNOWN	RBPMSLP	1	2	-0.308546
chr21	16035413	16035509	16035461	ENSG00000252273.1	-	snRNA	KNOWN	RNU6-426P	1	1	-0.481566
chr21	16070522	16627397	16348959	ENSG00000215386.10	+	lincRNA	KNOWN	MIR99AHG	19	8	-0.304279
chr21	16094415	16095372	16094893	ENSG00000214976.2	-	processed_pseudogene	KNOWN	VDAC2P1	1	1	-0.619287
chr21	16121310	16121644	16121477	ENSG00000224602.1	-	processed_pseudogene	KNOWN	RPS26P5	1	1	-0.519938
chr21	16284696	16284768	16284732	ENSG00000201025.1	-	snoRNA	NOVEL	SNORD74	1	1	-0.154802
chr21	16291791	16308133	16299962	ENSG00000270071.1	-	lincRNA	KNOWN	AP001172.2	1	3	-0.352572
chr21	16417139	16419080	16418109	ENSG00000270139.1	-	lincRNA	KNOWN	AP001172.3	1	3	-0.119984
chr21	16525919	16527019	16526469	ENSG00000280432.1	+	TEC	KNOWN	AP000962.1	1	1	-0.457347
chr21	16539089	16539169	16539129	ENSG00000207638.1	+	miRNA	KNOWN	MIR99A	1	1	-0.320203
chr21	16539823	16539916	16539869	ENSG00000199030.1	+	miRNA	KNOWN	MIRLET7C	1	1	-0.320203
chr21	16574718	16582637	16578677	ENSG00000269950.1	-	lincRNA	KNOWN	AP000962.2	1	2	-0.342411
chr21	16590237	16590325	16590281	ENSG00000207863.1	+	miRNA	KNOWN	MIR125B2	1	1	-0.290952
chr21	16630827	16640683	16635755	ENSG00000228798.1	+	lincRNA	KNOWN	AP000473.5	2	2	-0.014208
chr21	16643529	16645065	16644297	ENSG00000270093.1	+	lincRNA	KNOWN	AP000473.8	1	1	-0.014208
chr21	16718998	16719157	16719077	ENSG00000239023.1	+	snRNA	KNOWN	RNU1-98P	1	1	-0.120553
chr21	16754519	16815688	16785103	ENSG00000237735.2	-	lincRNA	KNOWN	AP000473.6	1	3	-0.335804
chr21	16862875	16873691	16868283	ENSG00000232886.1	-	lincRNA	KNOWN	AF212831.2	1	4	-0.472963
chr21	17210469	17211347	17210908	ENSG00000225735.1	-	processed_pseudogene	KNOWN	NEK4P1	1	1	-0.299695
chr21	17296219	17296596	17296407	ENSG00000278181.1	+	processed_pseudogene	KNOWN	AP000457.2	1	1	-0.283048
chr21	17431547	17431647	17431597	ENSG00000252462.1	+	snRNA	KNOWN	RNU6-113P	1	1	-0.070738
chr21	17438890	17449185	17444037	ENSG00000232560.6	+	lincRNA	KNOWN	LINC01549	2	4	-0.070738
chr21	17500679	17500824	17500751	ENSG00000226580.1	-	processed_pseudogene	KNOWN	RPL39P40	1	1	-0.058149
chr21	17506453	17506728	17506590	ENSG00000266195.2	+	misc_RNA	KNOWN	RN7SL163P	1	1	-0.058149
chr21	17512382	17593579	17552980	ENSG00000154639.18	+	protein_coding	KNOWN	CXADR	5	8	-0.273399
chr21	17518526	17518993	17518759	ENSG00000232260.2	-	processed_pseudogene	KNOWN	BTF3L4P1	1	1	-0.089178
chr21	17527140	17527247	17527193	ENSG00000200754.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.089178
chr21	17576798	17576906	17576852	ENSG00000199962.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.149826
chr21	17593653	17612947	17603300	ENSG00000154640.14	-	protein_coding	KNOWN	BTG3	6	6	-0.157479
chr21	17611744	17633199	17622471	ENSG00000280594.1	+	processed_transcript	KNOWN	AP000432.1	2	3	-0.004817
chr21	17659276	17660384	17659830	ENSG00000226956.1	-	lincRNA	KNOWN	AP000432.2	1	2	-0.252538
chr21	17705408	17707455	17706431	ENSG00000279648.1	+	TEC	KNOWN	AP000432.3	1	1	-0.121787
chr21	17763315	17792523	17777919	ENSG00000240770.5	-	lincRNA	KNOWN	C21orf91-OT1	3	5	-0.362454
chr21	17788967	17819386	17804176	ENSG00000154642.10	-	protein_coding	KNOWN	C21orf91	6	5	-0.121531
chr21	17793488	17810845	17802166	ENSG00000244676.5	+	antisense	KNOWN	AL109761.5	2	2	0.015975
chr21	17835016	17885608	17860312	ENSG00000231755.1	-	lincRNA	KNOWN	CHODL-AS1	1	3	-0.217949
chr21	17891711	17891799	17891755	ENSG00000221335.1	+	miRNA	NOVEL	AP000745.1	1	1	-0.360914
chr21	17894193	17894485	17894339	ENSG00000215369.3	-	processed_pseudogene	KNOWN	RPL37P3	1	1	-0.360914
chr21	17901263	18267373	18084318	ENSG00000154645.13	+	protein_coding	KNOWN	CHODL	7	7	-0.420818
chr21	18022370	18114904	18068637	ENSG00000227330.1	-	lincRNA	KNOWN	AP000998.2	1	5	-0.393378
chr21	18269116	18485879	18377497	ENSG00000154646.8	-	protein_coding	KNOWN	TMPRSS15	3	25	-0.703675
chr21	18477358	18486599	18481978	ENSG00000228708.1	-	sense_overlapping	KNOWN	AL109763.1	1	2	-0.726896
chr21	18561265	18760003	18660634	ENSG00000224141.5	-	lincRNA	KNOWN	MIR548XHG	3	5	-0.522934
chr21	18614431	18650360	18632395	ENSG00000230233.1	+	lincRNA	KNOWN	AF240627.2	1	3	-0.727085
chr21	18686090	18686164	18686127	ENSG00000265841.1	-	miRNA	KNOWN	MIR548X	1	1	-0.710328
chr21	18704371	18704454	18704412	ENSG00000221041.2	-	miRNA	NOVEL	AP001537.1	1	1	-0.066706
chr21	18857779	18858276	18858027	ENSG00000198618.5	+	processed_pseudogene	KNOWN	PPIAP22	1	1	-0.366373
chr21	18917213	18917429	18917321	ENSG00000279156.1	+	TEC	KNOWN	RP4-646P19.1	1	1	-0.642348
chr21	18917934	18935859	18926896	ENSG00000232193.1	-	lincRNA	KNOWN	AL157359.4	1	2	-0.621541
chr21	18953264	18967058	18960161	ENSG00000226204.1	-	lincRNA	KNOWN	AL157359.3	1	2	-0.731758
chr21	19046310	19047684	19046997	ENSG00000235965.2	-	lincRNA	KNOWN	AP000431.1	1	2	-0.488294
chr21	19130523	19134423	19132473	ENSG00000229289.1	+	lincRNA	KNOWN	AP000431.2	1	2	-0.786446
chr21	19244543	19246392	19245467	ENSG00000226818.1	+	processed_pseudogene	KNOWN	SLC6A6P1	1	1	-0.211624
chr21	19301613	19303739	19302676	ENSG00000231620.1	+	lincRNA	KNOWN	AP000855.4	1	2	-0.567933
chr21	19345148	19345312	19345230	ENSG00000212609.1	+	snRNA	KNOWN	RNU1-139P	1	1	-0.834945
chr21	19593841	19594108	19593974	ENSG00000230198.1	+	processed_pseudogene	KNOWN	RPL37P4	1	1	-0.719563
chr21	19620695	19621545	19621120	ENSG00000271486.1	+	processed_pseudogene	KNOWN	AP000403.3	1	1	-0.565483
chr21	19739709	19740150	19739929	ENSG00000229336.1	+	processed_pseudogene	KNOWN	AP000568.2	1	1	-0.474355
chr21	19759359	19760128	19759743	ENSG00000215353.2	-	processed_pseudogene	KNOWN	C1QBPP1	1	1	-0.570236
chr21	19893279	19899755	19896517	ENSG00000233480.1	-	lincRNA	KNOWN	AP000946.2	1	3	-0.936023
chr21	20256752	20258820	20257786	ENSG00000233236.1	-	lincRNA	KNOWN	AP001171.1	1	2	-0.798035
chr21	20355748	20355852	20355800	ENSG00000251851.1	-	snRNA	KNOWN	RNU6-772P	1	1	-0.738083
chr21	20356653	20356896	20356774	ENSG00000252963.1	+	misc_RNA	KNOWN	RN7SKP147	1	1	-0.738083
chr21	20388334	20388845	20388589	ENSG00000233676.2	+	processed_pseudogene	KNOWN	FDPSP6	1	1	-0.281226
chr21	20424949	20426206	20425577	ENSG00000234439.1	-	processed_pseudogene	KNOWN	KRT18P2	1	1	-0.435746
chr21	20430443	20430762	20430602	ENSG00000233206.1	-	processed_pseudogene	KNOWN	RPS3AP1	1	1	-0.497006
chr21	20597953	20598163	20598058	ENSG00000276738.1	+	processed_pseudogene	KNOWN	AP001506.1	1	1	-0.371255
chr21	20742590	20803216	20772903	ENSG00000224924.6	-	lincRNA	KNOWN	LINC00320	5	8	-0.603122
chr21	20828127	20828622	20828374	ENSG00000215351.3	-	processed_pseudogene	KNOWN	PPIAP1	1	1	-0.225349
chr21	20998315	21543329	21270822	ENSG00000154654.14	+	protein_coding	KNOWN	NCAM2	5	18	-0.494197
chr21	21223295	21226829	21225062	ENSG00000226771.1	-	antisense	KNOWN	AP001136.2	1	2	-0.415948
chr21	21397748	21397826	21397787	ENSG00000221210.1	-	miRNA	NOVEL	AP001137.1	1	1	-0.311905
chr21	21566763	21615437	21591100	ENSG00000234730.1	+	lincRNA	KNOWN	AF241725.4	1	2	-0.249902
chr21	21655038	21686329	21670683	ENSG00000237527.1	-	lincRNA	KNOWN	AF241725.6	1	5	-0.363583
chr21	21723293	21737319	21730306	ENSG00000238265.1	-	lincRNA	KNOWN	LINC00317	1	3	-0.317284
chr21	21746973	21797415	21772194	ENSG00000233997.5	+	lincRNA	KNOWN	LINC01425	2	5	-0.303558
chr21	21933315	21975681	21954498	ENSG00000227075.1	-	lincRNA	KNOWN	AP000472.3	1	3	-0.478266
chr21	22008944	22098459	22053701	ENSG00000233215.5	-	lincRNA	KNOWN	AP000472.2	3	6	-0.511835
chr21	22098617	22116528	22107572	ENSG00000184856.6	+	lincRNA	KNOWN	LINC00308	1	6	-0.346378
chr21	22134698	22136083	22135390	ENSG00000234340.1	-	processed_pseudogene	KNOWN	AP000705.8	1	1	-0.759145
chr21	22153950	22154299	22154124	ENSG00000231136.1	-	processed_pseudogene	KNOWN	AP000705.6	1	1	-0.701008
chr21	22205192	22205332	22205262	ENSG00000202339.1	+	snRNA	KNOWN	RNU4-45P	1	1	-0.519443
chr21	22209939	22420819	22315379	ENSG00000226043.1	+	lincRNA	KNOWN	AP000705.7	1	3	-0.643067
chr21	22436290	22438349	22437319	ENSG00000223488.2	-	processed_pseudogene	KNOWN	MAPK6PS2	1	1	-0.391525
chr21	22500604	22520058	22510331	ENSG00000234034.1	-	lincRNA	KNOWN	AP000959.2	1	3	-0.544085
chr21	22882582	22884000	22883291	ENSG00000225906.1	+	processed_pseudogene	KNOWN	AP000949.1	1	3	-0.713361
chr21	23065491	23131206	23098348	ENSG00000230972.1	+	lincRNA	KNOWN	AP001255.2	1	5	-0.754371
chr21	23079284	23079392	23079338	ENSG00000275469.1	+	miRNA	KNOWN	MIR6130	1	1	-0.935842
chr21	23090028	23091831	23090929	ENSG00000219368.3	-	processed_pseudogene	KNOWN	ZNF299P	1	1	-0.735827
chr21	23101223	23103074	23102148	ENSG00000231058.1	+	processed_pseudogene	KNOWN	MSANTD2P1	1	3	-0.735827
chr21	23281736	23281909	23281822	ENSG00000223078.1	-	snRNA	KNOWN	RNU2-55P	1	1	-0.602382
chr21	23361104	23384861	23372982	ENSG00000228592.1	-	lincRNA	KNOWN	D21S2088E	1	5	-0.831657
chr21	23390258	23390996	23390627	ENSG00000223822.2	+	processed_pseudogene	KNOWN	EEF1A1P1	1	1	-0.488004
chr21	23407658	23409128	23408393	ENSG00000237569.1	-	processed_pseudogene	KNOWN	TUBAP	1	2	-0.488004
chr21	23432181	23432282	23432231	ENSG00000199698.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.356282
chr21	23477641	23490724	23484182	ENSG00000227716.1	+	lincRNA	KNOWN	AP000459.7	1	2	-0.893293
chr21	23841559	23841643	23841601	ENSG00000277305.1	-	miRNA	NOVEL	AP000960.1	1	1	-0.554065
chr21	23888798	23890541	23889669	ENSG00000231986.1	-	lincRNA	KNOWN	AP000474.1	1	3	-0.375865
chr21	23960905	23967273	23964089	ENSG00000235564.1	-	lincRNA	KNOWN	AP000477.2	1	2	-0.409069
chr21	24043257	24050286	24046771	ENSG00000226996.5	+	lincRNA	KNOWN	AP000477.3	2	2	-0.418148
chr21	24155170	24188342	24171756	ENSG00000224018.1	-	lincRNA	KNOWN	AP000470.2	1	3	-0.711363
chr21	24304550	24321377	24312963	ENSG00000224832.1	-	lincRNA	KNOWN	AP000469.2	1	4	-0.543282
chr21	24428740	24547942	24488341	ENSG00000237484.5	+	lincRNA	KNOWN	AP000476.1	3	6	-0.569485
chr21	24840550	25057746	24949148	ENSG00000226983.2	+	lincRNA	KNOWN	AP000235.2	1	4	-0.362557
chr21	24886676	24902756	24894716	ENSG00000227090.1	-	lincRNA	KNOWN	AP000402.3	1	2	-0.097916
chr21	24938431	24992817	24965624	ENSG00000230379.5	-	lincRNA	KNOWN	AP000146.2	3	2	-0.533176
chr21	25031005	25031529	25031267	ENSG00000237444.1	-	processed_pseudogene	KNOWN	AP001342.1	1	1	-0.325999
chr21	25055535	25069906	25062720	ENSG00000244278.1	+	lincRNA	KNOWN	AP000235.3	1	4	-0.130401
chr21	25095022	25103670	25099346	ENSG00000232512.6	+	lincRNA	KNOWN	AP000233.2	2	3	-0.400405
chr21	25101132	25101415	25101273	ENSG00000274662.1	+	misc_RNA	KNOWN	RN7SKP236	1	1	-0.400405
chr21	25127469	25135247	25131358	ENSG00000223870.1	+	lincRNA	KNOWN	AP000233.3	1	4	-0.248244
chr21	25169431	25333825	25251628	ENSG00000222042.1	-	lincRNA	KNOWN	AP000233.4	1	4	-0.417063
chr21	25202207	25202315	25202261	ENSG00000238627.1	+	rRNA	KNOWN	RNA5SP489	1	1	-0.253783
chr21	25339005	25339099	25339052	ENSG00000238660.1	+	miRNA	NOVEL	AP001340.1	1	1	-0.269465
chr21	25361821	25362431	25362126	ENSG00000213885.3	+	processed_pseudogene	KNOWN	RPL13AP7	1	1	-0.377493
chr21	25371827	25372043	25371935	ENSG00000279534.1	+	TEC	KNOWN	AP001340.3	1	1	0.036139
chr21	25385820	25431701	25408760	ENSG00000185433.8	-	lincRNA	KNOWN	LINC00158	4	5	-0.090381
chr21	25454736	25454842	25454789	ENSG00000275053.1	+	miRNA	NOVEL	AP000221.2	1	1	-0.328584
chr21	25515473	25518338	25516905	ENSG00000229962.1	-	lincRNA	KNOWN	AP000221.1	1	2	-0.419348
chr21	25561909	25575168	25568538	ENSG00000234883.3	+	lincRNA	KNOWN	MIR155HG	1	4	-0.220622
chr21	25573980	25574044	25574012	ENSG00000275402.1	+	miRNA	KNOWN	MIR155	1	1	-0.285710
chr21	25582770	25583326	25583048	ENSG00000260583.1	-	antisense	KNOWN	AP000223.42	1	1	-0.285710
chr21	25585656	25607517	25596586	ENSG00000154719.13	-	protein_coding	KNOWN	MRPL39	3	11	-0.262492
chr21	25639272	25717562	25678417	ENSG00000154721.14	+	protein_coding	KNOWN	JAM2	7	10	-0.344014
chr21	25643489	25644216	25643852	ENSG00000237731.1	+	processed_pseudogene	KNOWN	RNGTTP1	1	1	-0.162727
chr21	25692180	25692554	25692367	ENSG00000227054.1	+	processed_pseudogene	KNOWN	FDX1P2	1	1	-0.169500
chr21	25716503	25735673	25726088	ENSG00000154723.12	-	protein_coding	KNOWN	ATP5J	8	5	-0.195901
chr21	25734570	25772460	25753515	ENSG00000154727.10	+	protein_coding	KNOWN	GABPA	3	10	-0.154698
chr21	25762938	25763333	25763135	ENSG00000235514.1	-	processed_pseudogene	KNOWN	LLPHP2	1	1	-0.239459
chr21	25880550	26171128	26025839	ENSG00000142192.20	-	protein_coding	KNOWN	APP	17	18	0.050524
chr21	25928754	25942686	25935720	ENSG00000233783.7	+	processed_transcript	KNOWN	AP001442.2	7	4	0.012106
chr21	25943044	25943145	25943094	ENSG00000251972.1	-	snRNA	KNOWN	RNU6-123P	1	1	-0.003165
chr21	26158091	26175824	26166957	ENSG00000224541.1	+	antisense	KNOWN	AP001439.2	1	2	0.301366
chr21	26170871	26217381	26194126	ENSG00000273492.5	+	lincRNA	KNOWN	AP000230.1	2	4	0.005499
chr21	26190707	26190813	26190760	ENSG00000206802.1	+	snRNA	KNOWN	RNU6-926P	1	1	0.054839
chr21	26349780	26350634	26350207	ENSG00000229025.1	-	lincRNA	KNOWN	AP001595.1	1	2	-0.427429
chr21	26378552	26471698	26425125	ENSG00000232692.1	+	antisense	KNOWN	AP001596.6	4	6	-0.247840
chr21	26393635	26569252	26481443	ENSG00000197934.8	+	antisense	KNOWN	CYYR1-AS1	2	4	-0.353946
chr21	26459903	26460214	26460058	ENSG00000273115.1	-	lincRNA	KNOWN	KB-1466C5.1	1	1	-0.432088
chr21	26466209	26573284	26519746	ENSG00000166265.11	-	protein_coding	KNOWN	CYYR1	2	4	-0.442016
chr21	26835747	26845409	26840578	ENSG00000154734.14	-	protein_coding	KNOWN	ADAMTS1	6	9	0.150095
chr21	26889376	26939742	26914559	ENSG00000223563.1	+	antisense	KNOWN	AP001601.2	1	3	-0.144255
chr21	26917912	26966513	26942212	ENSG00000154736.5	-	protein_coding	KNOWN	ADAMTS5	1	8	0.051219
chr21	26953961	26954043	26954002	ENSG00000266133.1	+	miRNA	KNOWN	MIR4759	1	1	0.155417
chr21	27143344	27143949	27143646	ENSG00000215326.3	-	processed_pseudogene	KNOWN	GPX1P2	1	1	-0.005705
chr21	27302659	27302710	27302684	ENSG00000281587.1	+	miRNA	NOVEL	AP001604.1	1	1	0.006474
chr21	27358885	27448579	27403732	ENSG00000231236.2	-	lincRNA	KNOWN	AP001604.3	1	4	0.056500
chr21	27361164	27395787	27378475	ENSG00000236332.1	+	lincRNA	KNOWN	AP001605.4	1	5	0.070197
chr21	27367014	27367947	27367480	ENSG00000233300.1	-	processed_pseudogene	KNOWN	EIF4A1P1	1	1	-0.074018
chr21	27420380	27421023	27420701	ENSG00000217026.3	-	processed_pseudogene	KNOWN	RPL10P1	1	1	-0.207568
chr21	27492118	27492261	27492189	ENSG00000219592.2	+	processed_pseudogene	KNOWN	NCSTNP1	1	1	-0.448577
chr21	27638693	27653491	27646092	ENSG00000234052.1	+	lincRNA	KNOWN	AP001607.1	1	3	-0.197531
chr21	27722379	27751233	27736806	ENSG00000225298.5	+	lincRNA	KNOWN	LINC00113	3	4	-0.087935
chr21	27954922	27985295	27970108	ENSG00000234083.1	+	lincRNA	KNOWN	AJ006995.3	1	3	-0.253365
chr21	28013363	28023233	28018298	ENSG00000178457.3	+	lincRNA	KNOWN	LINC00314	1	2	-0.130401
chr21	28048404	28137611	28093007	ENSG00000232079.6	+	processed_transcript	KNOWN	AL035610.1	7	5	-0.316818
chr21	28116094	28228667	28172380	ENSG00000236532.5	-	lincRNA	KNOWN	AL035610.2	3	6	-0.018210
chr21	28150606	28150677	28150641	ENSG00000281339.1	+	miRNA	NOVEL	AL035610.3	1	1	-0.090872
chr21	28439346	28674848	28557097	ENSG00000232855.6	-	lincRNA	KNOWN	AF131217.1	3	5	-0.037408
chr21	28539318	28540355	28539836	ENSG00000226935.6	+	lincRNA	KNOWN	LINC00161	2	2	-0.312398
chr21	28872191	28885371	28878781	ENSG00000156239.11	-	protein_coding	KNOWN	N6AMT1	3	7	0.563613
chr21	28887280	28889272	28888276	ENSG00000215005.2	-	processed_pseudogene	KNOWN	HSPD1P7	1	2	0.563613
chr21	28901779	28903697	28902738	ENSG00000215317.2	-	processed_pseudogene	KNOWN	THUMPD1P1	1	3	-0.011720
chr21	28928144	28992956	28960550	ENSG00000198862.13	-	protein_coding	KNOWN	LTN1	7	30	-0.009770
chr21	28997613	28998033	28997823	ENSG00000176054.6	-	processed_pseudogene	KNOWN	RPL23P2	1	1	0.355026
chr21	29004384	29019378	29011881	ENSG00000156253.6	-	protein_coding	KNOWN	RWDD2B	7	6	0.358344
chr21	29024255	29024890	29024572	ENSG00000273254.1	-	antisense	KNOWN	RP1-100J12.1	1	1	0.360330
chr21	29024629	29054488	29039558	ENSG00000156256.14	+	protein_coding	KNOWN	USP16	6	19	0.205578
chr21	29055805	29073797	29064801	ENSG00000156261.12	-	protein_coding	KNOWN	CCT8	12	16	0.045165
chr21	29058073	29060095	29059084	ENSG00000231125.2	-	sense_intronic	KNOWN	AF129075.5	1	2	0.083059
chr21	29077471	29175889	29126680	ENSG00000156265.15	+	protein_coding	KNOWN	MAP3K7CL	16	10	0.181733
chr21	29127701	29128188	29127944	ENSG00000232687.1	-	processed_pseudogene	KNOWN	RPL12P9	1	1	0.067469
chr21	29139283	29139384	29139333	ENSG00000201984.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.254930
chr21	29180425	29180639	29180532	ENSG00000212479.2	-	snoRNA	NOVEL	U3	1	1	0.125939
chr21	29182027	29187795	29184911	ENSG00000224649.1	-	antisense	KNOWN	AF124730.4	1	2	0.125939
chr21	29193480	29288205	29240842	ENSG00000215533.8	+	sense_overlapping	KNOWN	LINC00189	3	3	0.035924
chr21	29194071	29630751	29412411	ENSG00000156273.15	+	protein_coding	KNOWN	BACH1	13	5	0.043552
chr21	29222321	29223257	29222789	ENSG00000236056.1	+	processed_pseudogene	KNOWN	GAPDHP14	1	1	0.057435
chr21	29351634	29361894	29356764	ENSG00000248476.1	+	sense_intronic	KNOWN	BACH1-IT1	1	4	0.477017
chr21	29359002	29359453	29359227	ENSG00000273017.1	+	sense_intronic	KNOWN	AP000240.9	1	1	0.477017
chr21	29370019	29376339	29373179	ENSG00000232118.2	-	lincRNA	KNOWN	BACH1-AS1	2	2	0.196961
chr21	29370497	29373709	29372103	ENSG00000228817.4	+	lincRNA	KNOWN	BACH1-IT2	3	4	0.196961
chr21	29496047	29500386	29498216	ENSG00000234293.1	+	sense_intronic	KNOWN	BACH1-IT3	1	2	0.140627
chr21	29536933	29940033	29738483	ENSG00000171189.16	-	protein_coding	KNOWN	GRIK1	10	18	-0.245913
chr21	29657406	29657831	29657618	ENSG00000273464.1	+	antisense	KNOWN	RP11-313P22.1	1	1	-0.100653
chr21	29712038	29712125	29712081	ENSG00000281868.1	+	miRNA	NOVEL	AP000237.1	1	1	-0.474778
chr21	29748175	29764002	29756088	ENSG00000174680.9	+	antisense	KNOWN	GRIK1-AS1	5	5	-0.231281
chr21	30089717	30097836	30093776	ENSG00000259981.1	+	lincRNA	KNOWN	AF096876.1	1	2	-0.246250
chr21	30165564	30166756	30166160	ENSG00000156282.4	-	protein_coding	KNOWN	CLDN17	1	1	-0.419169
chr21	30209151	30211783	30210467	ENSG00000227342.1	-	lincRNA	KNOWN	LINC00307	1	3	-0.514454
chr21	30214006	30216073	30215039	ENSG00000156284.5	-	protein_coding	KNOWN	CLDN8	1	1	-0.388230
chr21	30263380	30263881	30263630	ENSG00000225267.1	-	processed_pseudogene	KNOWN	RPL8P2	1	1	-0.539040
chr21	30281309	30282958	30282133	ENSG00000188694.5	-	protein_coding	KNOWN	KRTAP24-1	1	1	-0.547418
chr21	30289145	30289514	30289329	ENSG00000232263.1	-	protein_coding	KNOWN	KRTAP25-1	1	1	-0.547418
chr21	30319124	30320316	30319720	ENSG00000197683.4	-	protein_coding	KNOWN	KRTAP26-1	1	1	-1.111100
chr21	30337013	30337694	30337353	ENSG00000206107.2	-	protein_coding	KNOWN	KRTAP27-1	1	1	-0.695788
chr21	30348075	30425912	30386993	ENSG00000182816.7	-	protein_coding	KNOWN	KRTAP13-2	2	3	-0.361561
chr21	30348399	30348609	30348504	ENSG00000186980.6	-	protein_coding	KNOWN	KRTAP23-1	1	1	-0.695788
chr21	30356515	30356885	30356700	ENSG00000250973.1	-	unprocessed_pseudogene	KNOWN	KRTAP13-6P	1	1	-0.446428
chr21	30375294	30375378	30375336	ENSG00000265007.1	-	miRNA	KNOWN	MIR4327	1	1	-0.326073
chr21	30396074	30396822	30396448	ENSG00000198390.4	+	protein_coding	KNOWN	KRTAP13-1	1	1	-0.351310
chr21	30425265	30425968	30425616	ENSG00000240432.3	-	protein_coding	KNOWN	KRTAP13-3	1	1	-0.271972
chr21	30430230	30431026	30430628	ENSG00000186971.3	+	protein_coding	KNOWN	KRTAP13-4	1	1	-0.702539
chr21	30436466	30436964	30436715	ENSG00000233640.2	-	unprocessed_pseudogene	KNOWN	KRTAP13-5P	1	1	-0.702539
chr21	30440275	30440945	30440610	ENSG00000186970.4	+	protein_coding	KNOWN	KRTAP15-1	1	1	-0.702539
chr21	30479699	30480344	30480021	ENSG00000184351.7	-	protein_coding	KNOWN	KRTAP19-1	1	1	-0.676338
chr21	30480048	30491985	30486016	ENSG00000244025.3	-	protein_coding	KNOWN	KRTAP19-3	2	2	-0.618984
chr21	30487057	30487436	30487246	ENSG00000186965.4	-	protein_coding	KNOWN	KRTAP19-2	1	1	-0.676338
chr21	30496824	30497133	30496978	ENSG00000186967.6	-	protein_coding	KNOWN	KRTAP19-4	1	1	-0.331608
chr21	30501657	30502117	30501887	ENSG00000186977.2	-	protein_coding	KNOWN	KRTAP19-5	1	1	-0.331608
chr21	30510307	30510497	30510402	ENSG00000237841.1	-	unprocessed_pseudogene	KNOWN	KRTAP19-9P	1	1	-0.577860
chr21	30514613	30514799	30514706	ENSG00000235312.1	-	unprocessed_pseudogene	KNOWN	KRTAP19-10P	1	1	-0.577860
chr21	30526546	30526701	30526623	ENSG00000218125.1	-	unprocessed_pseudogene	KNOWN	AP000567.27	1	1	-0.577860
chr21	30537278	30537381	30537329	ENSG00000236612.1	-	unprocessed_pseudogene	KNOWN	KRTAP19-11P	1	1	-0.483123
chr21	30541535	30541864	30541699	ENSG00000186925.6	-	protein_coding	KNOWN	KRTAP19-6	1	1	-0.483123
chr21	30541660	30561314	30551487	ENSG00000244362.2	-	protein_coding	KNOWN	KRTAP19-7	2	2	-0.616826
chr21	30590105	30590397	30590251	ENSG00000206106.2	-	protein_coding	KNOWN	KRTAP22-2	1	1	-0.615557
chr21	30592440	30593075	30592757	ENSG00000212938.3	+	protein_coding	KNOWN	KRTAP6-3	1	1	-0.615557
chr21	30598590	30598902	30598746	ENSG00000186930.4	-	protein_coding	KNOWN	KRTAP6-2	1	1	-0.615557
chr21	30601087	30601382	30601234	ENSG00000186924.3	+	protein_coding	KNOWN	KRTAP22-1	1	1	-0.615557
chr21	30613431	30613930	30613680	ENSG00000184724.5	-	protein_coding	KNOWN	KRTAP6-1	1	1	-0.455496
chr21	30616425	30616699	30616562	ENSG00000244624.3	+	protein_coding	KNOWN	KRTAP20-1	1	1	-0.455496
chr21	30620627	30620850	30620738	ENSG00000206105.2	+	protein_coding	KNOWN	KRTAP20-4	1	1	-0.455496
chr21	30635236	30635619	30635427	ENSG00000184032.2	+	protein_coding	KNOWN	KRTAP20-2	1	1	-0.325735
chr21	30642864	30643136	30643000	ENSG00000206104.2	+	protein_coding	KNOWN	KRTAP20-3	1	1	-0.325735
chr21	30718525	30718777	30718651	ENSG00000231068.1	-	protein_coding	KNOWN	KRTAP21-3	1	1	-0.032635
chr21	30741780	30742595	30742187	ENSG00000236400.1	-	unprocessed_pseudogene	KNOWN	KRTAP21-4P	1	1	-0.506646
chr21	30746794	30747233	30747013	ENSG00000187026.2	-	protein_coding	KNOWN	KRTAP21-2	1	1	-0.506646
chr21	30754830	30755428	30755129	ENSG00000187005.4	-	protein_coding	KNOWN	KRTAP21-1	1	1	-0.567353
chr21	30762682	30762882	30762782	ENSG00000238257.1	-	unprocessed_pseudogene	KNOWN	AP000244.11	1	1	-0.567353
chr21	30802242	30802427	30802334	ENSG00000233036.1	-	unprocessed_pseudogene	KNOWN	KRTAP8-2P	1	1	-0.343103
chr21	30806932	30807119	30807025	ENSG00000227840.1	-	unprocessed_pseudogene	KNOWN	KRTAP8-3P	1	1	-0.343103
chr21	30812697	30813252	30812974	ENSG00000183640.5	-	protein_coding	KNOWN	KRTAP8-1	1	1	-0.519236
chr21	30829039	30829759	30829399	ENSG00000274749.1	-	protein_coding	KNOWN	KRTAP7-1	1	1	-0.519236
chr21	30880644	30881555	30881099	ENSG00000182591.5	-	protein_coding	KNOWN	KRTAP11-1	1	1	-0.552780
chr21	31038159	31038476	31038317	ENSG00000206102.2	-	protein_coding	KNOWN	KRTAP19-8	1	1	-0.266056
chr21	31060600	31063168	31061884	ENSG00000228941.1	-	processed_pseudogene	KNOWN	UBE3AP2	1	2	-0.293439
chr21	31118416	31559977	31339196	ENSG00000156299.12	-	protein_coding	KNOWN	TIAM1	6	29	-0.116837
chr21	31452466	31453223	31452844	ENSG00000237325.3	+	processed_pseudogene	KNOWN	AP000563.2	1	1	-0.527404
chr21	31559245	31560487	31559866	ENSG00000237594.2	+	antisense	KNOWN	AP000251.3	1	2	-0.036523
chr21	31627127	31628600	31627863	ENSG00000230870.2	-	processed_pseudogene	KNOWN	FBXW11P1	1	1	0.197109
chr21	31653593	31659500	31656546	ENSG00000234509.1	-	lincRNA	KNOWN	AP000253.1	1	3	0.328753
chr21	31659622	31668931	31664276	ENSG00000142168.14	+	protein_coding	KNOWN	SOD1	4	5	0.328753
chr21	31664306	31664482	31664394	ENSG00000238390.1	+	snoRNA	NOVEL	SNORA81	1	1	0.328753
chr21	31666728	31667247	31666987	ENSG00000273271.1	-	antisense	KNOWN	AP000254.8	1	1	0.328753
chr21	31671033	31732075	31701554	ENSG00000156304.14	-	protein_coding	KNOWN	SCAF4	6	20	0.102954
chr21	31706555	31706864	31706709	ENSG00000229046.1	+	processed_pseudogene	KNOWN	HMGN1P2	1	1	0.325949
chr21	31735732	31736407	31736069	ENSG00000273091.1	+	lincRNA	KNOWN	AP000255.6	1	1	-0.195171
chr21	31840341	31840858	31840599	ENSG00000234107.1	+	processed_pseudogene	KNOWN	TPT1P1	1	1	-0.367440
chr21	31873315	32044633	31958974	ENSG00000142149.8	+	protein_coding	KNOWN	HUNK	4	11	0.051445
chr21	32020966	32021782	32021374	ENSG00000237138.1	-	antisense	KNOWN	HUNK-AS1	1	2	0.145010
chr21	32080316	32197813	32139064	ENSG00000230323.5	-	lincRNA	KNOWN	LINC00159	2	4	0.021609
chr21	32151905	32152008	32151956	ENSG00000264055.1	+	miRNA	NOVEL	AP000261.1	1	1	-0.107317
chr21	32259804	32261585	32260694	ENSG00000261610.1	-	lincRNA	KNOWN	AP000265.1	1	1	0.279077
chr21	32268219	32279069	32273644	ENSG00000159055.3	-	protein_coding	KNOWN	MIS18A	2	5	-0.045871
chr21	32277863	32280988	32279425	ENSG00000227256.1	+	antisense	KNOWN	MIS18A-AS1	1	3	-0.109642
chr21	32291813	32314784	32303298	ENSG00000170262.12	+	protein_coding	KNOWN	MRAP	4	5	0.064290
chr21	32306464	32308737	32307600	ENSG00000232623.1	-	antisense	KNOWN	AP000266.7	1	2	-0.025246
chr21	32311018	32393026	32352022	ENSG00000142207.6	-	protein_coding	KNOWN	URB1	3	39	0.320912
chr21	32377187	32377322	32377254	ENSG00000200792.1	-	snoRNA	KNOWN	SNORA80A	1	1	0.304212
chr21	32393130	32393960	32393545	ENSG00000256073.3	+	lincRNA	KNOWN	URB1-AS1	1	1	0.304536
chr21	32412006	32515397	32463701	ENSG00000166979.12	+	protein_coding	KNOWN	EVA1C	13	8	0.447861
chr21	32496812	32497311	32497061	ENSG00000229007.1	+	processed_pseudogene	KNOWN	EXOSC3P1	1	1	0.364195
chr21	32538299	32538434	32538366	ENSG00000252045.1	+	snoRNA	NOVEL	SNORA33	1	1	0.420463
chr21	32563075	32563210	32563142	ENSG00000252950.1	+	rRNA	KNOWN	RNA5SP490	1	1	-0.030405
chr21	32572238	32575881	32574059	ENSG00000186842.4	-	3prime_overlapping_ncrna	KNOWN	LINC00846	1	4	-0.144361
chr21	32574841	32587373	32581107	ENSG00000242220.6	-	protein_coding	KNOWN	TCP10L	4	5	-0.144361
chr21	32578822	32612281	32595551	ENSG00000265590.9	-	protein_coding	KNOWN	AP000275.65	2	8	0.218965
chr21	32592079	32612866	32602472	ENSG00000159079.18	-	protein_coding	KNOWN	C21orf59	8	7	0.399645
chr21	32621049	32622096	32621572	ENSG00000228433.1	+	processed_pseudogene	KNOWN	OR7E23P	1	1	0.361510
chr21	32624416	32625096	32624756	ENSG00000238220.1	-	processed_pseudogene	KNOWN	AP000275.64	1	2	0.361510
chr21	32628759	32728048	32678403	ENSG00000159082.17	-	protein_coding	KNOWN	SYNJ1	11	33	-0.032781
chr21	32728115	32743122	32735618	ENSG00000238197.5	+	antisense	KNOWN	PAXBP1-AS1	3	4	0.070935
chr21	32730987	32731044	32731015	ENSG00000273662.1	+	miRNA	NOVEL	AP000279.1	1	1	0.091992
chr21	32733899	32771858	32752878	ENSG00000159086.14	-	protein_coding	KNOWN	PAXBP1	9	18	0.002642
chr21	32772100	32893735	32832917	ENSG00000205930.8	+	lincRNA	KNOWN	C21orf62-AS1	7	4	-0.101024
chr21	32790673	32791504	32791088	ENSG00000279690.1	-	TEC	KNOWN	AP000280.66	1	1	0.048923
chr21	32790674	32813743	32802208	ENSG00000205929.9	-	protein_coding	KNOWN	C21orf62	5	4	0.034206
chr21	32841496	32841811	32841653	ENSG00000224427.1	-	processed_pseudogene	KNOWN	AP000281.1	1	1	0.025266
chr21	32841861	32841995	32841928	ENSG00000207098.1	-	snoRNA	NOVEL	SNORA70	1	1	0.025266
chr21	32844367	32849934	32847150	ENSG00000232360.1	-	antisense	KNOWN	AP000281.2	1	2	0.025266
chr21	32913649	33071104	32992376	ENSG00000227757.3	-	antisense	KNOWN	AP000282.2	1	2	-0.034163
chr21	32958888	32960566	32959727	ENSG00000228961.1	+	lincRNA	KNOWN	AP000282.3	1	2	-0.116761
chr21	33025845	33029196	33027520	ENSG00000205927.4	+	protein_coding	KNOWN	OLIG2	3	2	-0.189190
chr21	33057829	33064983	33061406	ENSG00000232539.1	+	lincRNA	KNOWN	LINC00945	1	5	0.161701
chr21	33070144	33072420	33071282	ENSG00000184221.12	+	protein_coding	KNOWN	OLIG1	3	2	0.041660
chr21	33111699	33123703	33117701	ENSG00000226527.1	-	lincRNA	KNOWN	AP000289.6	1	3	0.031238
chr21	33156632	33159110	33157871	ENSG00000226433.1	+	antisense	KNOWN	AP000290.7	1	2	0.184603
chr21	33165470	33170236	33167853	ENSG00000229086.3	-	lincRNA	KNOWN	LINC01548	1	4	0.181842
chr21	33167128	33167262	33167195	ENSG00000281214.1	+	miRNA	NOVEL	AP000290.1	1	1	0.184603
chr21	33229901	33265675	33247788	ENSG00000159110.19	+	protein_coding	KNOWN	IFNAR2	10	10	0.195162
chr21	33246774	33283212	33264993	ENSG00000249624.8	+	protein_coding	KNOWN	AP000295.9	2	7	0.157013
chr21	33263873	33266260	33265066	ENSG00000223799.1	-	antisense	KNOWN	IL10RB-AS1	1	2	0.049557
chr21	33266358	33297234	33281796	ENSG00000243646.8	+	protein_coding	KNOWN	IL10RB	5	7	0.345390
chr21	33309491	33310181	33309836	ENSG00000272659.1	+	lincRNA	KNOWN	AP000295.10	1	1	0.506819
chr21	33324477	33359862	33342169	ENSG00000142166.12	+	protein_coding	KNOWN	IFNAR1	3	11	0.249568
chr21	33334571	33335096	33334833	ENSG00000226501.2	+	processed_pseudogene	KNOWN	USF1P1	1	1	0.417978
chr21	33402896	33479348	33441122	ENSG00000159128.14	+	protein_coding	KNOWN	IFNGR2	6	8	0.527907
chr21	33432485	33480011	33456248	ENSG00000142188.16	-	protein_coding	KNOWN	TMEM50B	10	9	0.488966
chr21	33481580	33482195	33481887	ENSG00000215088.3	-	processed_pseudogene	KNOWN	RPS5P3	1	1	0.349150
chr21	33482499	33484258	33483378	ENSG00000231355.1	-	antisense	KNOWN	AP000302.58	1	3	0.349150
chr21	33485530	33491720	33488625	ENSG00000177692.11	-	protein_coding	KNOWN	DNAJC28	4	3	0.385102
chr21	33503931	33543491	33523711	ENSG00000159131.16	-	protein_coding	KNOWN	GART	18	22	0.469190
chr21	33518610	33519108	33518859	ENSG00000233956.1	-	processed_pseudogene	KNOWN	BTF3P6	1	1	0.359214
chr21	33542618	33577481	33560049	ENSG00000159140.17	+	protein_coding	KNOWN	SON	20	13	0.461056
chr21	33550662	33550728	33550695	ENSG00000275224.1	+	miRNA	KNOWN	MIR6501	1	1	0.534214
chr21	33559542	33588708	33574125	ENSG00000159147.17	-	protein_coding	KNOWN	DONSON	13	11	0.256169
chr21	33584687	33931607	33758147	ENSG00000249209.2	-	protein_coding	KNOWN	AP000304.12	1	8	0.351032
chr21	33589341	33643926	33616633	ENSG00000205758.11	-	protein_coding	KNOWN	CRYZL1	23	13	0.279996
chr21	33642400	33899861	33771130	ENSG00000205726.13	+	protein_coding	KNOWN	ITSN1	33	40	0.374655
chr21	33903453	33915980	33909716	ENSG00000241837.6	-	protein_coding	KNOWN	ATP5O	10	7	0.370407
chr21	33915534	33977691	33946612	ENSG00000237945.7	+	antisense	KNOWN	LINC00649	20	6	0.320242
chr21	33918995	33919338	33919166	ENSG00000244294.3	-	misc_RNA	KNOWN	RN7SL740P	1	1	0.260192
chr21	33967101	33968573	33967837	ENSG00000273102.1	-	lincRNA	KNOWN	AP000569.9	1	2	0.433460
chr21	34073224	34143034	34108129	ENSG00000243927.5	+	protein_coding	KNOWN	MRPS6	5	5	0.153052
chr21	34073570	34106260	34089915	ENSG00000198743.5	+	protein_coding	KNOWN	SLC5A3	1	2	0.132149
chr21	34073592	34360033	34216812	ENSG00000272657.1	+	processed_transcript	KNOWN	AP000320.7	1	6	0.149113
chr21	34135432	34136071	34135751	ENSG00000224598.1	-	processed_pseudogene	KNOWN	RPS5P2	1	1	0.410263
chr21	34157724	34190244	34173984	ENSG00000227456.7	+	lincRNA	KNOWN	LINC00310	8	3	0.094945
chr21	34205055	34325034	34265044	ENSG00000214955.5	+	lincRNA	KNOWN	AP000318.2	1	5	0.073386
chr21	34364024	34371389	34367706	ENSG00000159197.3	+	protein_coding	KNOWN	KCNE2	1	2	0.347843
chr21	34370802	34375348	34373075	ENSG00000225555.1	-	antisense	KNOWN	AP000320.6	1	2	0.339475
chr21	34375480	34407866	34391673	ENSG00000205670.10	+	protein_coding	KNOWN	SMIM11A	7	6	0.396625
chr21	34400317	34401072	34400694	ENSG00000222018.1	-	protein_coding	KNOWN	C21orf140	1	1	0.443066
chr21	34412200	34412587	34412393	ENSG00000273104.1	+	lincRNA	KNOWN	CMP21-97G8.1	1	1	0.335263
chr21	34418715	34423966	34421340	ENSG00000243627.4	-	protein_coding	KNOWN	AP000322.53	1	2	0.335263
chr21	34425508	34426017	34425762	ENSG00000272958.1	+	lincRNA	KNOWN	CMP21-97G8.2	1	1	0.335263
chr21	34446688	34512275	34479481	ENSG00000180509.11	-	protein_coding	KNOWN	KCNE1	9	4	0.323505
chr21	34456110	34456237	34456173	ENSG00000221398.1	-	snoRNA	NOVEL	SNORA11	1	1	0.744068
chr21	34513142	34615142	34564142	ENSG00000159200.17	-	protein_coding	KNOWN	RCAN1	14	5	0.250338
chr21	34669389	34718227	34693808	ENSG00000159212.12	+	protein_coding	KNOWN	CLIC6	2	7	0.154751
chr21	34723807	34737181	34730494	ENSG00000230978.1	-	lincRNA	KNOWN	LINC00160	1	6	0.358234
chr21	34745757	34784886	34765321	ENSG00000234380.1	+	antisense	KNOWN	LINC01426	2	3	0.165994
chr21	34787801	36004667	35396234	ENSG00000159216.18	-	protein_coding	KNOWN	RUNX1	17	13	0.151324
chr21	35136638	35139222	35137930	ENSG00000234703.1	+	lincRNA	KNOWN	AF015262.2	1	2	0.325191
chr21	35472095	35472432	35472263	ENSG00000223671.2	-	processed_pseudogene	KNOWN	RPL34P3	1	1	0.218133
chr21	35599732	35600022	35599877	ENSG00000231300.1	-	processed_pseudogene	KNOWN	EZH2P1	1	1	-0.383167
chr21	35713139	35732942	35723040	ENSG00000230794.1	-	lincRNA	KNOWN	AF015720.3	1	2	0.212863
chr21	35720715	35720808	35720761	ENSG00000211590.1	+	miRNA	KNOWN	MIR802	1	1	0.212286
chr21	35724747	35725100	35724923	ENSG00000229761.1	-	processed_pseudogene	KNOWN	RPS20P1	1	1	0.212286
chr21	35887195	35887807	35887501	ENSG00000234008.5	+	processed_pseudogene	KNOWN	PPP1R2P2	1	1	0.185101
chr21	35898055	35898429	35898242	ENSG00000280170.1	-	protein_coding	KNOWN	AP000687.1	1	1	0.216688
chr21	36005338	36007838	36006588	ENSG00000231106.2	+	lincRNA	KNOWN	LINC01436	1	2	0.294300
chr21	36016079	36016546	36016312	ENSG00000214914.3	-	processed_pseudogene	KNOWN	RPL23AP3	1	1	0.123527
chr21	36034541	36079389	36056965	ENSG00000185917.13	-	protein_coding	KNOWN	SETD4	17	12	0.377695
chr21	36050214	36051377	36050795	ENSG00000189089.5	+	processed_pseudogene	KNOWN	RIMKLBP1	1	1	0.226641
chr21	36060432	36064408	36062420	ENSG00000236677.1	+	antisense	KNOWN	AP000688.11	1	3	0.226641
chr21	36066545	36066652	36066598	ENSG00000200213.1	+	snRNA	KNOWN	RNU6-992P	1	1	0.226641
chr21	36069642	36126640	36098141	ENSG00000230212.6	-	sense_intronic	KNOWN	AP000688.14	2	4	0.310428
chr21	36069941	36073166	36071553	ENSG00000159228.12	+	protein_coding	KNOWN	CBR1	5	3	0.390644
chr21	36082859	36090414	36086636	ENSG00000236119.1	+	lincRNA	KNOWN	AP000688.15	1	2	0.384986
chr21	36104881	36109690	36107285	ENSG00000233393.1	+	lincRNA	KNOWN	AP000688.29	1	2	0.235958
chr21	36130489	36131376	36130932	ENSG00000226054.2	+	processed_pseudogene	KNOWN	MEMO1P1	1	1	0.571160
chr21	36131767	36175815	36153791	ENSG00000236830.6	-	processed_transcript	KNOWN	CBR3-AS1	18	5	0.553691
chr21	36132450	36133032	36132741	ENSG00000214889.3	+	processed_pseudogene	KNOWN	RPS9P1	1	1	0.571160
chr21	36134912	36146566	36140739	ENSG00000159231.5	+	protein_coding	KNOWN	CBR3	1	3	0.571160
chr21	36156782	36294274	36225528	ENSG00000142197.12	+	protein_coding	KNOWN	DOPEY2	4	37	0.495622
chr21	36168970	36170180	36169575	ENSG00000228149.1	-	processed_pseudogene	KNOWN	RPL3P1	1	1	0.552611
chr21	36295173	36295702	36295437	ENSG00000214867.3	-	processed_pseudogene	KNOWN	SRSF9P1	1	1	0.305506
chr21	36319792	36320670	36320231	ENSG00000273199.1	-	antisense	KNOWN	AP000692.10	1	1	0.527302
chr21	36320189	36386148	36353168	ENSG00000159256.12	+	protein_coding	KNOWN	MORC3	12	17	0.341758
chr21	36360630	36362040	36361335	ENSG00000228107.1	+	sense_overlapping	KNOWN	AP000692.9	1	2	0.332306
chr21	36385378	36419015	36402196	ENSG00000159259.7	+	protein_coding	KNOWN	CHAF1B	3	14	0.430973
chr21	36388878	36389112	36388995	ENSG00000224421.1	-	processed_pseudogene	KNOWN	ATP5J2LP	1	1	0.231598
chr21	36430360	36481070	36455715	ENSG00000230479.1	+	antisense	KNOWN	AP000695.6	1	2	0.424968
chr21	36445731	36532408	36489069	ENSG00000233818.1	+	antisense	KNOWN	AP000695.4	2	2	0.313046
chr21	36460621	36576569	36518595	ENSG00000159261.10	-	protein_coding	KNOWN	CLDN14	6	3	0.299596
chr21	36485867	36487760	36486813	ENSG00000279365.1	+	TEC	KNOWN	KB-176G8.1	1	1	0.517852
chr21	36485983	36487411	36486697	ENSG00000223741.1	-	processed_pseudogene	KNOWN	PSMD4P1	1	2	0.517852
chr21	36632681	36637033	36634857	ENSG00000231324.1	-	lincRNA	KNOWN	AP000696.2	1	2	-0.019040
chr21	36698773	36701564	36700168	ENSG00000224269.1	-	antisense	KNOWN	AP000697.6	1	2	0.348332
chr21	36699133	36749917	36724525	ENSG00000159263.15	+	protein_coding	KNOWN	SIM2	5	11	0.404914
chr21	36750888	36990236	36870562	ENSG00000159267.14	-	protein_coding	KNOWN	HLCS	7	12	0.247905
chr21	36803984	36806284	36805134	ENSG00000237646.1	-	sense_intronic	KNOWN	HLCS-IT1	1	2	0.464363
chr21	36851911	36852028	36851969	ENSG00000199806.1	+	rRNA	KNOWN	RNA5SP491	1	1	0.106565
chr21	36943267	36944125	36943696	ENSG00000270652.1	+	processed_pseudogene	KNOWN	DPRXP5	1	2	0.231598
chr21	36966512	36971828	36969170	ENSG00000224790.1	+	lincRNA	KNOWN	AP000704.5	1	4	0.280313
chr21	36986739	36986851	36986795	ENSG00000207416.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.347937
chr21	36994643	36995075	36994859	ENSG00000215734.3	+	processed_pseudogene	KNOWN	MRPL20P1	1	1	0.269185
chr21	37006150	37019659	37012904	ENSG00000183145.8	+	protein_coding	KNOWN	RIPPLY3	3	4	0.099930
chr21	37045530	37045636	37045583	ENSG00000212136.1	+	snRNA	KNOWN	RNU6-696P	1	1	0.465280
chr21	37059170	37073170	37066170	ENSG00000185808.13	-	protein_coding	KNOWN	PIGP	8	6	0.394141
chr21	37073226	37203112	37138169	ENSG00000182670.13	+	protein_coding	KNOWN	TTC3	25	46	0.124480
chr21	37100814	37101343	37101078	ENSG00000270116.1	+	sense_intronic	KNOWN	AP001429.1	1	1	0.051350
chr21	37187666	37193926	37190796	ENSG00000228677.1	-	antisense	KNOWN	TTC3-AS1	1	2	0.072810
chr21	37208503	37221736	37215119	ENSG00000230366.9	+	lincRNA	KNOWN	DSCR9	5	5	0.323522
chr21	37215605	37215903	37215754	ENSG00000263969.2	+	misc_RNA	KNOWN	RN7SL678P	1	1	0.367227
chr21	37221419	37237744	37229581	ENSG00000242553.1	+	lincRNA	KNOWN	AP001432.14	1	2	0.327179
chr21	37223420	37267919	37245669	ENSG00000157538.13	-	protein_coding	KNOWN	DSCR3	13	10	0.300681
chr21	37267784	37268497	37268140	ENSG00000272948.2	+	antisense	KNOWN	AP001412.1	1	1	0.296191
chr21	37365477	37365932	37365704	ENSG00000273210.1	-	antisense	KNOWN	AP001437.1	1	1	0.146735
chr21	37365790	37517450	37441620	ENSG00000157540.19	+	protein_coding	KNOWN	DYRK1A	9	13	0.109661
chr21	37607376	37916446	37761911	ENSG00000157542.9	-	protein_coding	KNOWN	KCNJ6	1	4	0.089694
chr21	37717102	37719569	37718335	ENSG00000233213.1	-	sense_intronic	KNOWN	KCNJ6-AS1	1	2	-0.000574
chr21	37951425	38121360	38036392	ENSG00000184029.9	-	protein_coding	KNOWN	DSCR4	3	6	-0.128613
chr21	38006544	38010618	38008581	ENSG00000223608.1	-	sense_intronic	KNOWN	DSCR4-IT1	1	2	-0.417600
chr21	38121451	38188016	38154733	ENSG00000198054.11	+	protein_coding	KNOWN	DSCR8	8	5	-0.014882
chr21	38157034	38307357	38232195	ENSG00000157551.17	+	protein_coding	KNOWN	KCNJ15	21	7	0.086428
chr21	38204141	38206080	38205110	ENSG00000270835.2	-	transcribed_processed_pseudogene	KNOWN	AP001425.14	2	1	0.027036
chr21	38206156	38208644	38207400	ENSG00000233316.3	+	sense_intronic	KNOWN	DSCR10	2	3	0.027036
chr21	38237217	38238201	38237709	ENSG00000226012.1	-	lincRNA	KNOWN	AP001434.2	1	2	0.209643
chr21	38238227	38238664	38238445	ENSG00000231123.1	-	processed_pseudogene	KNOWN	SPATA20P1	1	1	0.209643
chr21	38323635	38333421	38328528	ENSG00000231231.5	-	lincRNA	KNOWN	LINC01423	2	5	0.065611
chr21	38380027	38661780	38520903	ENSG00000157554.18	-	protein_coding	KNOWN	ERG	16	12	0.096518
chr21	38502445	38502621	38502533	ENSG00000231480.1	+	processed_pseudogene	KNOWN	SNRPGP13	1	1	-0.113912
chr21	38739021	38747460	38743240	ENSG00000223806.7	-	lincRNA	KNOWN	LINC00114	3	6	0.112951
chr21	38805307	38824955	38815131	ENSG00000157557.11	+	protein_coding	KNOWN	ETS2	4	11	0.279279
chr21	38846247	38848644	38847445	ENSG00000229986.1	+	lincRNA	KNOWN	AP001042.1	1	2	0.099334
chr21	38863676	38956467	38910071	ENSG00000205622.9	-	lincRNA	KNOWN	AF064858.6	7	8	0.254149
chr21	38888772	38903905	38896338	ENSG00000229925.1	+	lincRNA	KNOWN	AP001043.1	1	2	-0.249440
chr21	38894785	38894867	38894826	ENSG00000272015.1	+	snoRNA	NOVEL	SNORA62	1	1	-0.287245
chr21	38894917	38895252	38895084	ENSG00000227721.1	+	processed_pseudogene	KNOWN	RPSAP64	1	1	-0.287245
chr21	38974429	38977774	38976101	ENSG00000232837.1	-	lincRNA	KNOWN	AF064858.7	1	3	0.356265
chr21	38988707	39006153	38997430	ENSG00000235888.1	-	lincRNA	KNOWN	AF064858.8	1	3	0.511189
chr21	39006648	39011329	39008988	ENSG00000237721.1	-	lincRNA	KNOWN	AF064858.11	1	3	0.549017
chr21	39028536	39029128	39028832	ENSG00000237609.1	-	lincRNA	KNOWN	AF064858.10	1	2	0.613108
chr21	39127568	39128040	39127804	ENSG00000228861.5	+	processed_pseudogene	KNOWN	RPL23AP12	1	1	0.468140
chr21	39171130	39172106	39171618	ENSG00000235701.1	-	processed_pseudogene	KNOWN	PCBP2P1	1	1	0.142032
chr21	39171462	39171560	39171511	ENSG00000276873.1	-	misc_RNA	NOVEL	uc_338	1	1	0.142032
chr21	39174769	39183851	39179310	ENSG00000183527.11	-	protein_coding	KNOWN	PSMG1	5	7	0.142032
chr21	39184176	39321559	39252867	ENSG00000185658.13	-	protein_coding	KNOWN	BRWD1	16	42	0.047127
chr21	39184469	39184899	39184684	ENSG00000272991.1	+	antisense	KNOWN	AF129408.17	1	1	0.142032
chr21	39216624	39217506	39217065	ENSG00000232608.1	+	processed_pseudogene	KNOWN	TIMM9P2	1	2	-0.264439
chr21	39217093	39219805	39218449	ENSG00000237373.1	-	sense_overlapping	KNOWN	BRWD1-IT1	1	2	-0.264439
chr21	39235386	39236020	39235703	ENSG00000229623.1	-	processed_pseudogene	KNOWN	METTL21AP1	1	1	0.348090
chr21	39313935	39314962	39314448	ENSG00000255568.3	+	antisense	KNOWN	BRWD1-AS2	1	1	0.388124
chr21	39315707	39323218	39319462	ENSG00000238141.2	+	antisense	KNOWN	BRWD1-AS1	1	3	0.388124
chr21	39342315	39349647	39345981	ENSG00000205581.10	-	protein_coding	KNOWN	HMGN1	20	9	0.335106
chr21	39344537	39344628	39344582	ENSG00000252915.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.335106
chr21	39373763	39377066	39375414	ENSG00000227406.1	-	processed_pseudogene	KNOWN	RNF6P1	1	5	0.361880
chr21	39380244	39428528	39404386	ENSG00000182093.14	+	protein_coding	KNOWN	WRB	14	9	0.252182
chr21	39405844	39445805	39425824	ENSG00000157578.13	-	protein_coding	KNOWN	LCA5L	21	11	0.026814
chr21	39445855	39515506	39480680	ENSG00000185437.13	+	protein_coding	KNOWN	SH3BGR	9	7	-0.102249
chr21	39447010	39447069	39447039	ENSG00000275523.1	+	miRNA	KNOWN	MIR6508	1	1	0.003058
chr21	39488327	39488760	39488543	ENSG00000235808.1	+	processed_pseudogene	KNOWN	MYL6P2	1	1	-0.224482
chr21	39491544	39491898	39491721	ENSG00000228349.1	-	processed_pseudogene	KNOWN	RPS26P4	1	1	-0.229936
chr21	39525583	39529855	39527719	ENSG00000235012.1	+	processed_pseudogene	KNOWN	AF121897.4	1	2	-0.006923
chr21	39556442	39673137	39614789	ENSG00000183778.17	+	protein_coding	KNOWN	B3GALT5	6	5	-0.048537
chr21	39597147	39612821	39604984	ENSG00000184809.12	-	antisense	KNOWN	B3GALT5-AS1	4	3	-0.219835
chr21	39630271	39726085	39678178	ENSG00000225330.1	+	sense_overlapping	KNOWN	AF064860.5	1	3	0.034356
chr21	39727755	39730680	39729217	ENSG00000231713.2	+	lincRNA	KNOWN	AF064860.7	2	3	-0.018955
chr21	39745407	39802096	39773751	ENSG00000183067.5	+	protein_coding	KNOWN	IGSF5	3	9	-0.186037
chr21	39867317	39929397	39898357	ENSG00000183036.10	+	protein_coding	KNOWN	PCP4	4	4	0.039232
chr21	40010999	40847139	40429069	ENSG00000171587.14	-	protein_coding	KNOWN	DSCAM	3	33	-0.071159
chr21	40212352	40212431	40212391	ENSG00000263973.1	-	miRNA	KNOWN	MIR4760	1	1	-0.222323
chr21	40383083	40385358	40384220	ENSG00000235123.5	+	antisense	KNOWN	DSCAM-AS1	4	3	-0.325796
chr21	40513144	40513279	40513211	ENSG00000207147.1	+	snoRNA	NOVEL	SNORA51	1	1	0.049179
chr21	40615378	40630767	40623072	ENSG00000233756.5	-	sense_intronic	KNOWN	DSCAM-IT1	2	4	-0.070439
chr21	40863994	40864473	40864233	ENSG00000230859.1	+	processed_pseudogene	KNOWN	YRDCP3	1	1	-0.075850
chr21	41141493	41148133	41144813	ENSG00000226496.2	-	antisense	KNOWN	LINC00323	3	3	0.036035
chr21	41167557	41167629	41167593	ENSG00000263681.1	+	miRNA	KNOWN	MIR3197	1	1	-0.136083
chr21	41167801	41282518	41225159	ENSG00000182240.15	+	protein_coding	KNOWN	BACE2	10	9	-0.026836
chr21	41175231	41185239	41180235	ENSG00000280109.1	-	TEC	KNOWN	PLAC4	2	1	0.270962
chr21	41176322	41186788	41181555	ENSG00000225745.8	-	antisense	KNOWN	AL773572.7	3	4	0.270962
chr21	41180097	41180626	41180361	ENSG00000224388.1	+	antisense	KNOWN	BACE2-IT1	1	2	0.270962
chr21	41304212	41357431	41330821	ENSG00000183844.16	+	protein_coding	KNOWN	FAM3B	6	10	0.098155
chr21	41361943	41409390	41385666	ENSG00000183486.12	+	protein_coding	KNOWN	MX2	13	14	0.172292
chr21	41420304	41459214	41439759	ENSG00000157601.13	+	protein_coding	KNOWN	MX1	18	19	0.108573
chr21	41441056	41445708	41443382	ENSG00000228318.3	-	antisense	KNOWN	AP001610.5	1	3	0.168749
chr21	41464551	41531116	41497833	ENSG00000184012.11	-	protein_coding	KNOWN	TMPRSS2	11	14	0.149453
chr21	41539206	41539326	41539266	ENSG00000207503.1	+	snoRNA	NOVEL	SNORA32	1	1	0.167719
chr21	41559125	41562958	41561041	ENSG00000232806.1	-	lincRNA	KNOWN	AP001610.9	1	3	0.005483
chr21	41576135	41581319	41578727	ENSG00000223400.1	-	lincRNA	KNOWN	AP006748.1	1	2	0.139820
chr21	41679181	41697336	41688258	ENSG00000227702.1	+	lincRNA	KNOWN	LINC00111	1	3	0.487080
chr21	41711520	41715775	41713647	ENSG00000236384.7	-	lincRNA	KNOWN	LINC00479	4	7	0.548370
chr21	41716436	41717580	41717008	ENSG00000232401.1	+	antisense	KNOWN	LINC00112	1	3	0.548370
chr21	41739369	41767106	41753237	ENSG00000183421.11	-	protein_coding	KNOWN	RIPK4	2	9	0.631869
chr21	41739373	41741308	41740340	ENSG00000236883.1	+	antisense	KNOWN	AP001615.9	1	2	0.613945
chr21	41746772	41746841	41746806	ENSG00000275166.1	-	miRNA	KNOWN	MIR6814	1	1	0.613945
chr21	41798225	41879482	41838853	ENSG00000141956.13	-	protein_coding	KNOWN	PRDM15	16	33	0.516349
chr21	41870633	41872054	41871343	ENSG00000236545.1	+	antisense	KNOWN	AP001619.3	1	2	0.422332
chr21	41874756	41877613	41876184	ENSG00000227698.1	-	sense_intronic	KNOWN	AP001619.2	1	3	0.422332
chr21	41882205	41882300	41882252	ENSG00000251778.1	+	snoRNA	NOVEL	SNORA3	1	1	0.422332
chr21	41885112	41953890	41919501	ENSG00000157617.16	-	protein_coding	KNOWN	C2CD2	8	14	0.428503
chr21	41922177	41922274	41922225	ENSG00000275439.1	-	miRNA	NOVEL	AP001619.1	1	1	0.228808
chr21	41986831	42010387	41998609	ENSG00000173276.13	-	protein_coding	KNOWN	ZBTB21	8	4	0.335530
chr21	42009194	42024924	42017059	ENSG00000237232.7	+	lincRNA	KNOWN	ZNF295-AS1	3	2	0.329207
chr21	42062959	42143453	42103206	ENSG00000177398.18	+	protein_coding	KNOWN	UMODL1	14	23	0.572970
chr21	42102134	42108534	42105334	ENSG00000184385.2	-	sense_overlapping	KNOWN	UMODL1-AS1	1	2	0.587029
chr21	42199689	42297244	42248466	ENSG00000160179.18	+	protein_coding	KNOWN	ABCG1	11	17	0.245109
chr21	42221173	42221286	42221229	ENSG00000223262.1	+	rRNA	KNOWN	RNA5SP492	1	1	0.249036
chr21	42311667	42315651	42313659	ENSG00000160180.15	-	protein_coding	KNOWN	TFF3	4	4	0.320261
chr21	42346357	42351128	42348742	ENSG00000160181.8	-	protein_coding	KNOWN	TFF2	3	5	-0.059281
chr21	42362282	42366594	42364438	ENSG00000160182.2	-	protein_coding	KNOWN	TFF1	1	3	0.157580
chr21	42371890	42396846	42384368	ENSG00000160183.13	-	protein_coding	KNOWN	TMPRSS3	8	13	0.239525
chr21	42403447	42447681	42425564	ENSG00000160185.14	+	protein_coding	KNOWN	UBASH3A	9	15	0.174683
chr21	42417497	42417593	42417545	ENSG00000252619.1	-	snRNA	KNOWN	RNU6-1149P	1	1	0.326897
chr21	42472486	42496354	42484420	ENSG00000160188.9	-	protein_coding	KNOWN	RSPH1	3	9	-0.046839
chr21	42496008	42581440	42538724	ENSG00000160190.13	+	protein_coding	KNOWN	SLC37A1	9	21	0.056707
chr21	42496539	42497443	42496991	ENSG00000239930.2	+	sense_intronic	KNOWN	AP001625.4	1	3	-0.213300
chr21	42508624	42509661	42509142	ENSG00000231867.1	+	sense_intronic	KNOWN	AP001625.5	2	2	-0.213300
chr21	42560374	42561934	42561154	ENSG00000235772.1	-	antisense	KNOWN	AP001625.6	1	2	0.039204
chr21	42599280	42615058	42607169	ENSG00000225431.1	-	lincRNA	KNOWN	AP001626.1	1	2	0.063633
chr21	42648271	42651244	42649757	ENSG00000235023.1	-	antisense	KNOWN	AP001626.2	1	2	0.207932
chr21	42653636	42775509	42714572	ENSG00000160191.17	+	protein_coding	KNOWN	PDE9A	28	20	0.220586
chr21	42733594	42741758	42737676	ENSG00000225731.1	-	antisense	KNOWN	AP001627.1	1	2	-0.144076
chr21	42777819	42779994	42778906	ENSG00000283051.1	-	lincRNA	KNOWN	KB-51A8.1	1	3	0.382829
chr21	42781074	42782229	42781651	ENSG00000233754.2	-	lincRNA	KNOWN	AP001628.7	1	2	0.382829
chr21	42831040	42836477	42833758	ENSG00000225218.1	-	lincRNA	KNOWN	AP001628.6	1	3	0.443977
chr21	42843094	42879568	42861331	ENSG00000160193.11	-	protein_coding	KNOWN	WDR4	7	12	0.413051
chr21	42879644	42913304	42896474	ENSG00000160194.17	+	protein_coding	KNOWN	NDUFV3	4	6	0.554788
chr21	42916803	42925646	42921224	ENSG00000233056.2	-	lincRNA	KNOWN	ERVH48-1	2	2	0.680014
chr21	42950928	42951014	42950971	ENSG00000264580.1	-	miRNA	KNOWN	MIR5692B	1	1	0.360330
chr21	42964639	42965363	42965001	ENSG00000224100.1	-	antisense	KNOWN	AP001630.5	1	2	0.360330
chr21	42974510	43033931	43004220	ENSG00000160199.14	+	protein_coding	KNOWN	PKNOX1	11	11	0.735906
chr21	43053191	43076943	43065067	ENSG00000160200.17	-	protein_coding	KNOWN	CBS	17	18	1.185023
chr21	43092956	43107587	43100271	ENSG00000160201.11	-	protein_coding	KNOWN	U2AF1	12	9	0.837178
chr21	43115334	43115709	43115521	ENSG00000232777.1	-	processed_pseudogene	KNOWN	MRPL51P2	1	1	0.666686
chr21	43127520	43127619	43127569	ENSG00000264009.1	+	miRNA	NOVEL	AP001631.1	1	1	0.666686
chr21	43140523	43141092	43140807	ENSG00000236663.1	-	antisense	KNOWN	FRGCA	1	2	0.638135
chr21	43159066	43162277	43160671	ENSG00000228120.2	-	lincRNA	KNOWN	AP001631.10	1	3	0.651950
chr21	43169008	43172805	43170906	ENSG00000160202.7	+	protein_coding	KNOWN	CRYAA	5	4	1.063468
chr21	43322417	43332039	43327228	ENSG00000237864.1	-	lincRNA	KNOWN	LINC00322	1	3	0.986450
chr21	43358147	43362349	43360248	ENSG00000237989.1	-	lincRNA	KNOWN	AP001046.5	1	2	1.030991
chr21	43363332	43366566	43364949	ENSG00000225637.1	+	lincRNA	KNOWN	AP001046.6	1	2	1.030991
chr21	43414515	43427128	43420821	ENSG00000142178.7	-	protein_coding	KNOWN	SIK1	2	14	0.816757
chr21	43446601	43453893	43450247	ENSG00000188660.3	+	lincRNA	KNOWN	LINC00319	2	4	0.639860
chr21	43462094	43479534	43470814	ENSG00000185186.8	-	lincRNA	KNOWN	LINC00313	7	4	1.027032
chr21	43465309	43467298	43466303	ENSG00000223975.1	+	lincRNA	KNOWN	AP001048.4	1	2	0.639480
chr21	43529192	43659493	43594342	ENSG00000160207.8	-	protein_coding	KNOWN	HSF2BP	2	9	0.489729
chr21	43551229	43551600	43551414	ENSG00000214326.2	+	processed_pseudogene	KNOWN	RPL31P1	1	1	0.375164
chr21	43565189	43565648	43565418	ENSG00000234289.5	+	protein_coding	KNOWN	H2BFS	1	1	0.375164
chr21	43609887	43609989	43609938	ENSG00000278433.1	-	miRNA	KNOWN	MIR6070	1	1	0.729422
chr21	43659548	43696079	43677813	ENSG00000160208.12	+	protein_coding	KNOWN	RRP1B	2	16	0.805350
chr21	43719094	43762307	43740700	ENSG00000160209.18	+	protein_coding	KNOWN	PDXK	19	11	1.108848
chr21	43748365	43748468	43748416	ENSG00000281420.1	-	pseudogene	NOVEL	AP001052.1	1	2	1.398880
chr21	43772512	43776445	43774478	ENSG00000160213.5	-	protein_coding	KNOWN	CSTB	2	3	0.892222
chr21	43783123	43783573	43783348	ENSG00000234030.1	+	processed_pseudogene	KNOWN	TMEM97P1	1	1	0.892222
chr21	43789513	43805293	43797403	ENSG00000160214.12	+	protein_coding	KNOWN	RRP1	7	13	1.242905
chr21	43805758	43812567	43809162	ENSG00000215458.8	-	antisense	KNOWN	AATBC	3	4	1.186212
chr21	43855890	43856342	43856116	ENSG00000226543.3	-	processed_pseudogene	KNOWN	MYL6P1	1	1	0.634643
chr21	43865186	43986536	43925861	ENSG00000160216.18	+	protein_coding	KNOWN	AGPAT3	18	11	0.759442
chr21	43919795	43919901	43919848	ENSG00000199598.1	-	snRNA	KNOWN	RNU6-859P	1	1	0.434179
chr21	43996322	43996420	43996371	ENSG00000252606.1	-	snRNA	KNOWN	RNU6-1150P	1	1	1.048048
chr21	44012319	44106552	44059435	ENSG00000160218.12	+	protein_coding	KNOWN	TRAPPC10	12	24	0.703200
chr21	44046347	44047041	44046694	ENSG00000213440.2	-	processed_pseudogene	KNOWN	H2AFZP1	1	2	0.548506
chr21	44107290	44131181	44119235	ENSG00000241945.7	+	protein_coding	KNOWN	PWP2	6	21	0.945558
chr21	44133605	44145723	44139664	ENSG00000160221.16	+	protein_coding	KNOWN	C21orf33	11	7	1.207469
chr21	44158740	44160076	44159408	ENSG00000225331.1	-	lincRNA	KNOWN	AP001055.6	2	3	1.418352
chr21	44175489	44176453	44175971	ENSG00000237604.1	+	lincRNA	KNOWN	AP001056.1	1	2	0.517298
chr21	44201290	44202696	44201993	ENSG00000232124.1	+	antisense	KNOWN	AP001057.1	1	2	0.782508
chr21	44206525	44207399	44206962	ENSG00000232698.1	-	lincRNA	KNOWN	AP001058.3	1	2	0.782508
chr21	44222991	44240966	44231978	ENSG00000160223.16	-	protein_coding	KNOWN	ICOSLG	4	7	0.499404
chr21	44241847	44242081	44241964	ENSG00000278158.1	+	lincRNA	KNOWN	AP001059.6	1	1	0.376295
chr21	44244545	44244993	44244769	ENSG00000275799.1	+	lincRNA	KNOWN	AP001059.7	1	1	0.376295
chr21	44246339	44262216	44254277	ENSG00000142182.8	-	protein_coding	KNOWN	DNMT3L	4	12	0.508703
chr21	44250813	44251520	44251166	ENSG00000232010.1	+	antisense	KNOWN	AP001059.5	1	2	0.548370
chr21	44285838	44298648	44292243	ENSG00000160224.16	+	protein_coding	KNOWN	AIRE	5	14	0.830556
chr21	44300051	44327376	44313713	ENSG00000141959.16	+	protein_coding	KNOWN	PFKL	12	25	1.146662
chr21	44328944	44330221	44329582	ENSG00000241728.5	-	sense_overlapping	KNOWN	AP001062.8	2	3	1.254872
chr21	44328944	44339402	44334173	ENSG00000160226.15	-	protein_coding	KNOWN	C21orf2	7	8	1.145757
chr21	44331234	44335851	44333542	ENSG00000184441.4	+	antisense	KNOWN	AP001062.7	1	2	1.130580
chr21	44339376	44340470	44339923	ENSG00000232969.1	+	antisense	KNOWN	AP001062.9	1	2	1.130580
chr21	44347767	44348295	44348031	ENSG00000260256.1	-	lincRNA	KNOWN	AP001063.1	1	1	1.130580
chr21	44350163	44443081	44396622	ENSG00000142185.16	+	protein_coding	KNOWN	TRPM2	8	33	0.634821
chr21	44414588	44425272	44419930	ENSG00000230061.2	-	antisense	KNOWN	TRPM2-AS	2	3	0.624984
chr21	44437121	44437175	44437148	ENSG00000266692.1	+	snoRNA	NOVEL	snoZ6	1	1	0.970151
chr21	44439035	44439110	44439072	ENSG00000264452.1	+	snoRNA	NOVEL	snoZ6	1	1	0.970151
chr21	44450986	44455284	44453135	ENSG00000229356.1	-	antisense	KNOWN	LRRC3-AS1	1	4	0.636797
chr21	44455486	44462196	44458841	ENSG00000160233.7	+	protein_coding	KNOWN	LRRC3	1	2	0.636797
chr21	44469929	44472516	44471222	ENSG00000224747.1	-	processed_pseudogene	KNOWN	MTCYBP21	1	3	0.518493
chr21	44472895	44473739	44473317	ENSG00000223431.1	+	processed_pseudogene	KNOWN	MTND6P21	1	2	0.515203
chr21	44473723	44475097	44474410	ENSG00000227999.1	-	processed_pseudogene	KNOWN	MTND5P1	1	1	0.515203
chr21	44477850	44478493	44478171	ENSG00000274225.1	+	lincRNA	KNOWN	KB-68A7.1	1	1	0.515203
chr21	44485577	44490288	44487932	ENSG00000228709.1	+	lincRNA	KNOWN	AP001065.15	1	2	0.519940
chr21	44494874	44495519	44495196	ENSG00000277352.1	+	lincRNA	KNOWN	KB-68A7.2	1	1	0.592421
chr21	44497892	44711580	44604736	ENSG00000175894.14	-	protein_coding	KNOWN	TSPEAR	4	13	0.330026
chr21	44506807	44516575	44511691	ENSG00000235890.2	+	antisense	KNOWN	TSPEAR-AS1	2	6	0.621293
chr21	44517216	44525952	44521584	ENSG00000182912.6	+	antisense	KNOWN	TSPEAR-AS2	3	3	0.635307
chr21	44538981	44540195	44539588	ENSG00000215455.4	-	protein_coding	KNOWN	KRTAP10-1	1	1	0.269990
chr21	44550357	44551505	44550931	ENSG00000205445.3	-	protein_coding	KNOWN	KRTAP10-2	2	2	0.262792
chr21	44557790	44558760	44558275	ENSG00000212935.1	-	protein_coding	KNOWN	KRTAP10-3	1	1	0.262792
chr21	44573729	44575371	44574550	ENSG00000215454.5	+	protein_coding	KNOWN	KRTAP10-4	1	1	0.208050
chr21	44579455	44580604	44580029	ENSG00000241123.1	-	protein_coding	KNOWN	KRTAP10-5	1	1	0.208050
chr21	44579737	44592505	44586121	ENSG00000188155.9	-	protein_coding	KNOWN	KRTAP10-6	2	2	0.247546
chr21	44600597	44612906	44606751	ENSG00000272804.2	+	protein_coding	KNOWN	KRTAP10-7	2	3	0.422196
chr21	44612079	44612954	44612516	ENSG00000187766.1	+	protein_coding	KNOWN	KRTAP10-8	1	1	0.463961
chr21	44627123	44628293	44627708	ENSG00000221837.5	+	protein_coding	KNOWN	KRTAP10-9	3	3	0.463961
chr21	44637356	44638455	44637905	ENSG00000221859.2	+	protein_coding	KNOWN	KRTAP10-10	1	1	0.435691
chr21	44646414	44647650	44647032	ENSG00000243489.4	+	protein_coding	KNOWN	KRTAP10-11	1	1	0.435691
chr21	44646657	44658341	44652499	ENSG00000205439.9	+	protein_coding	KNOWN	KRTAP12-3	2	3	0.317000
chr21	44654213	44654659	44654436	ENSG00000212933.1	-	protein_coding	KNOWN	KRTAP12-4	1	1	0.269450
chr21	44666189	44666927	44666558	ENSG00000221864.4	-	protein_coding	KNOWN	KRTAP12-2	1	1	0.269450
chr21	44675868	44678086	44676977	ENSG00000229880.1	-	processed_pseudogene	KNOWN	IMMTP1	1	1	-0.055685
chr21	44681576	44682163	44681869	ENSG00000187175.5	-	protein_coding	KNOWN	KRTAP12-1	1	1	-0.055685
chr21	44686358	44686629	44686493	ENSG00000276647.1	+	processed_pseudogene	KNOWN	RP1-225L15.1	1	1	-0.055685
chr21	44697172	44698044	44697608	ENSG00000189169.7	+	protein_coding	KNOWN	KRTAP10-12	2	3	0.229495
chr21	44702221	44702791	44702506	ENSG00000236382.1	+	unprocessed_pseudogene	KNOWN	KRTAP10-13P	1	1	0.229495
chr21	44768580	44802019	44785299	ENSG00000184787.18	-	protein_coding	KNOWN	UBE2G2	12	7	0.456073
chr21	44802577	44804717	44803647	ENSG00000236519.1	+	antisense	KNOWN	LINC01424	1	2	0.279077
chr21	44805617	44818779	44812198	ENSG00000184900.15	-	protein_coding	KNOWN	SUMO3	6	4	0.611373
chr21	44849585	44873903	44861744	ENSG00000183255.11	-	protein_coding	KNOWN	PTTG1IP	7	6	0.655815
chr21	44885953	44931989	44908971	ENSG00000160255.16	-	protein_coding	KNOWN	ITGB2	25	17	0.885137
chr21	44921051	44929678	44925364	ENSG00000227039.6	+	antisense	KNOWN	ITGB2-AS1	6	5	0.867476
chr21	44929653	44930112	44929882	ENSG00000273027.1	-	sense_intronic	KNOWN	LL21NC02-1C16.1	1	1	0.835572
chr21	44932814	44939913	44936363	ENSG00000183250.11	-	lincRNA	KNOWN	LINC01547	3	4	0.737883
chr21	44936303	44936954	44936628	ENSG00000272825.1	+	antisense	KNOWN	LL21NC02-1C16.2	1	1	0.737883
chr21	44940010	44976989	44958499	ENSG00000160256.12	+	protein_coding	KNOWN	FAM207A	5	6	0.924102
chr21	44978832	44979274	44979053	ENSG00000276529.1	+	lincRNA	KNOWN	AP001505.10	1	1	0.709846
chr21	44989864	44994086	44991975	ENSG00000234880.1	-	lincRNA	KNOWN	LINC00163	2	2	0.911527
chr21	44994362	44995185	44994773	ENSG00000261706.1	-	lincRNA	KNOWN	LINC00165	1	1	0.918189
chr21	44999208	45004727	45001967	ENSG00000275874.1	-	lincRNA	KNOWN	LINC00162	1	2	0.918189
chr21	45070952	45074165	45072558	ENSG00000235374.2	-	transcribed_processed_pseudogene	KNOWN	SSR4P1	3	2	0.415568
chr21	45073853	45226560	45150206	ENSG00000197381.15	+	protein_coding	KNOWN	ADARB1	15	13	0.406667
chr21	45100487	45101094	45100790	ENSG00000267857.2	-	lincRNA	KNOWN	RP5-1023B21.1	1	1	0.466840
chr21	45234340	45258730	45246535	ENSG00000182586.7	+	lincRNA	KNOWN	LINC00334	2	3	0.795037
chr21	45263928	45287898	45275913	ENSG00000186866.16	-	protein_coding	KNOWN	POFUT2	14	10	0.731471
chr21	45288052	45291738	45289895	ENSG00000215447.7	+	processed_transcript	KNOWN	BX322557.10	2	3	0.801430
chr21	45293285	45297354	45295319	ENSG00000223768.1	+	lincRNA	KNOWN	LINC00205	1	2	0.923063
chr21	45300245	45305257	45302751	ENSG00000184274.3	-	lincRNA	KNOWN	LINC00315	1	3	0.923063
chr21	45336707	45338665	45337686	ENSG00000229382.1	+	lincRNA	KNOWN	BX322557.13	1	2	1.131281
chr21	45338590	45341990	45340290	ENSG00000237664.1	-	lincRNA	KNOWN	LINC00316	1	2	1.131281
chr21	45376191	45376382	45376286	ENSG00000228930.1	-	processed_pseudogene	KNOWN	MTCO1P3	1	1	0.838387
chr21	45378201	45379635	45378918	ENSG00000228355.1	-	antisense	KNOWN	BX322559.3	2	2	0.838387
chr21	45403809	45404369	45404089	ENSG00000273796.1	-	lincRNA	KNOWN	LL21NC02-21A1.1	1	1	0.689233
chr21	45405137	45513720	45459428	ENSG00000182871.14	+	protein_coding	KNOWN	COL18A1	7	42	1.099613
chr21	45407386	45410065	45408725	ENSG00000224574.1	-	antisense	KNOWN	COL18A1-AS2	1	4	0.698581
chr21	45419716	45425070	45422393	ENSG00000183535.9	-	antisense	KNOWN	COL18A1-AS1	2	3	1.068684
chr21	45478266	45478326	45478296	ENSG00000275167.1	+	miRNA	KNOWN	MIR6815	1	1	0.974340
chr21	45493572	45544411	45518991	ENSG00000173638.18	-	protein_coding	KNOWN	SLC19A1	12	6	1.035947
chr21	45593654	45603056	45598355	ENSG00000233922.2	+	lincRNA	KNOWN	AL133493.2	2	3	0.649681
chr21	45643694	45942454	45793074	ENSG00000183570.16	+	protein_coding	KNOWN	PCBP3	21	16	0.348234
chr21	45759804	45763758	45761781	ENSG00000275139.1	-	antisense	KNOWN	RP1-101D8.1	1	1	0.182662
chr21	45827961	45836419	45832190	ENSG00000205424.1	-	antisense	KNOWN	AL592528.1	1	3	0.576609
chr21	45870854	45873345	45872099	ENSG00000276633.1	+	sense_intronic	KNOWN	AJ011931.1	1	1	1.091992
chr21	45914296	45919483	45916889	ENSG00000280604.1	+	sense_overlapping	KNOWN	PCBP3-OT1	1	3	0.835771
chr21	45974489	45974953	45974721	ENSG00000274248.1	+	lincRNA	KNOWN	AJ011932.1	1	1	0.990112
chr21	45981737	46005050	45993393	ENSG00000142156.14	+	protein_coding	KNOWN	COL6A1	7	35	1.080363
chr21	46037052	46039807	46038429	ENSG00000224413.1	+	lincRNA	KNOWN	AP001476.2	1	2	0.887040
chr21	46052596	46053105	46052850	ENSG00000228235.1	+	lincRNA	KNOWN	AP001476.4	1	2	1.082832
chr21	46056516	46057567	46057041	ENSG00000226115.1	+	lincRNA	KNOWN	AP001476.3	1	2	1.082832
chr21	46072085	46072248	46072166	ENSG00000233767.1	-	processed_pseudogene	KNOWN	PSMA6P3	1	1	0.847755
chr21	46093264	46097530	46095397	ENSG00000227438.1	-	antisense	KNOWN	AP001471.1	1	2	1.154276
chr21	46098097	46132849	46115473	ENSG00000142173.14	+	protein_coding	KNOWN	COL6A2	8	28	1.076903
chr21	46136262	46155567	46145914	ENSG00000160282.13	-	protein_coding	KNOWN	FTCD	12	15	1.346964
chr21	46151614	46152647	46152130	ENSG00000237338.1	+	antisense	KNOWN	FTCD-AS1	1	2	1.017542
chr21	46161148	46184476	46172812	ENSG00000160284.14	-	protein_coding	KNOWN	SPATC1L	2	5	0.989591
chr21	46185079	46188941	46187010	ENSG00000228404.1	+	antisense	KNOWN	AP001468.58	1	2	0.972502
chr21	46188141	46228824	46208482	ENSG00000160285.14	-	protein_coding	KNOWN	LSS	11	23	0.944420
chr21	46220269	46225364	46222816	ENSG00000223901.2	+	antisense	KNOWN	AP001469.5	2	4	0.910153
chr21	46229217	46259390	46244303	ENSG00000215424.9	+	antisense	KNOWN	MCM3AP-AS1	9	4	0.840473
chr21	46235126	46286297	46260711	ENSG00000160294.10	-	protein_coding	KNOWN	MCM3AP	10	29	0.941264
chr21	46246890	46247682	46247286	ENSG00000228137.1	+	antisense	KNOWN	AP001469.7	1	2	0.822385
chr21	46251549	46254133	46252841	ENSG00000239415.1	-	antisense	KNOWN	AP001469.9	2	2	0.873194
chr21	46286337	46297751	46292044	ENSG00000182362.13	+	protein_coding	KNOWN	YBEY	8	5	0.903418
chr21	46300181	46323875	46312028	ENSG00000160298.17	-	protein_coding	KNOWN	C21orf58	10	9	0.825493
chr21	46324122	46445769	46384945	ENSG00000160299.16	+	protein_coding	KNOWN	PCNT	8	47	0.930898
chr21	46326919	46327224	46327071	ENSG00000281637.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.847188
chr21	46420553	46421034	46420793	ENSG00000225043.1	-	processed_pseudogene	KNOWN	RPL18AP2	1	1	1.020607
chr21	46458899	46569852	46514375	ENSG00000160305.17	+	protein_coding	KNOWN	DIP2A	12	38	0.540317
chr21	46462471	46469306	46465888	ENSG00000223692.1	+	sense_intronic	KNOWN	DIP2A-IT1	1	4	0.884631
chr21	46525618	46525722	46525670	ENSG00000202239.1	+	snRNA	KNOWN	RNU6-396P	1	1	0.440478
chr21	46598962	46605208	46602085	ENSG00000160307.9	-	protein_coding	KNOWN	S100B	3	4	0.497405
chr21	46635167	46665124	46650145	ENSG00000160310.16	+	protein_coding	KNOWN	PRMT2	16	12	0.341371
chr21	46653558	46654022	46653790	ENSG00000230982.1	-	processed_pseudogene	KNOWN	DSTNP1	1	1	0.344379
chr21	46690764	46691226	46690995	ENSG00000212932.3	+	processed_pseudogene	KNOWN	RPL23AP4	1	1	0.230597
chr22	10736171	10736283	10736227	ENSG00000277248.1	-	snRNA	NOVEL	U2	1	1	0.221965
chr22	10936023	10936161	10936092	ENSG00000274237.1	-	miRNA	NOVEL	CU459211.1	1	1	-0.466881
chr22	10939388	10961338	10950363	ENSG00000283047.1	-	unprocessed_pseudogene	KNOWN	FRG1FP	1	9	-0.553879
chr22	11065974	11067346	11066660	ENSG00000280363.1	-	protein_coding	KNOWN	CU104787.1	1	2	-0.066875
chr22	11066501	11068089	11067295	ENSG00000279973.1	+	protein_coding	KNOWN	BAGE5	1	2	-0.066875
chr22	11124337	11125705	11125021	ENSG00000226444.2	+	processed_pseudogene	KNOWN	ACTR3BP6	1	2	-0.586080
chr22	11249809	11249959	11249884	ENSG00000276871.1	-	rRNA	NOVEL	5_8S_rRNA	1	1	-0.186984
chr22	11253605	11253719	11253662	ENSG00000277683.1	-	miRNA	NOVEL	AC137488.1	1	1	0.201616
chr22	11275565	11275637	11275601	ENSG00000277821.1	-	miRNA	NOVEL	AC137488.2	1	1	0.065681
chr22	11456856	11456937	11456896	ENSG00000273663.1	+	miRNA	NOVEL	CU013544.1	1	1	-0.258225
chr22	11478158	11478241	11478199	ENSG00000278534.1	-	miRNA	NOVEL	CT867976.1	1	1	-0.256736
chr22	11607867	11607939	11607903	ENSG00000278398.1	-	miRNA	NOVEL	CT867977.1	1	1	-0.382125
chr22	11628660	11628774	11628717	ENSG00000274416.1	+	miRNA	NOVEL	CT978678.1	1	1	-0.109820
chr22	11685895	11685976	11685935	ENSG00000278297.1	+	miRNA	NOVEL	CU459202.1	1	1	0.000000
chr22	12602466	12626642	12614554	ENSG00000283023.1	+	unprocessed_pseudogene	KNOWN	FRG1GP	1	9	-0.490470
chr22	12629372	12629473	12629422	ENSG00000277861.1	-	miRNA	NOVEL	AC116618.1	1	1	-0.489981
chr22	12779259	12779341	12779300	ENSG00000274773.1	-	miRNA	NOVEL	CU463998.1	1	1	-0.144448
chr22	12779976	12780057	12780016	ENSG00000277372.1	-	miRNA	NOVEL	CU463998.3	1	1	-0.144448
chr22	12780120	12780203	12780161	ENSG00000275065.1	-	miRNA	NOVEL	CU463998.2	1	1	-0.144448
chr22	15273855	15273961	15273908	ENSG00000276138.1	+	snRNA	NOVEL	U6	1	1	-0.483693
chr22	15282557	15288670	15285613	ENSG00000280341.1	-	lincRNA	KNOWN	LA16c-60D12.1	1	1	-0.483693
chr22	15290718	15297196	15293957	ENSG00000236235.1	+	unprocessed_pseudogene	KNOWN	LA16c-13E4.3	1	5	-0.563360
chr22	15298378	15304556	15301467	ENSG00000279442.1	-	lincRNA	KNOWN	LA16c-60D12.2	1	1	-0.563360
chr22	15326037	15343065	15334551	ENSG00000184624.4	-	unprocessed_pseudogene	KNOWN	ZNF72P	1	3	-0.499328
chr22	15349467	15350043	15349755	ENSG00000236097.1	+	processed_pseudogene	KNOWN	BNIP3P2	1	1	-0.522181
chr22	15489990	15492564	15491277	ENSG00000236831.1	+	unprocessed_pseudogene	KNOWN	YME1L1P1	1	3	-0.457787
chr22	15528158	15529139	15528648	ENSG00000130538.4	+	protein_coding	KNOWN	OR11H1	1	1	0.062992
chr22	15541436	15578006	15559721	ENSG00000237299.1	+	unprocessed_pseudogene	KNOWN	LA16c-60G3.6	1	4	-0.375882
chr22	15550904	15553838	15552371	ENSG00000235759.1	-	processed_pseudogene	KNOWN	ARHGAP42P3	1	3	-0.298923
chr22	15557577	15560694	15559135	ENSG00000233408.1	-	antisense	KNOWN	LA16c-23H5.4	1	3	-0.298923
chr22	15562017	15564276	15563146	ENSG00000215268.3	-	processed_pseudogene	KNOWN	LA16c-60G3.8	1	1	-0.298923
chr22	15572089	15573265	15572677	ENSG00000213727.3	-	processed_pseudogene	KNOWN	LA16c-60G3.7	1	1	-0.372894
chr22	15588361	15588478	15588419	ENSG00000230643.1	+	unprocessed_pseudogene	KNOWN	LA16c-60G3.5	1	1	-0.372894
chr22	15600908	15604882	15602895	ENSG00000230471.1	-	lincRNA	KNOWN	LA16c-2F2.8	1	3	-0.094886
chr22	15611759	15613096	15612427	ENSG00000231565.1	-	processed_pseudogene	KNOWN	NEK2P2	1	1	-0.028302
chr22	15615402	15615578	15615490	ENSG00000226474.1	-	unprocessed_pseudogene	KNOWN	LA16c-2F2.5	1	1	-0.028302
chr22	15622601	15632051	15627326	ENSG00000224435.2	-	unprocessed_pseudogene	KNOWN	NF1P6	1	11	-0.032591
chr22	15635180	15644330	15639755	ENSG00000234381.1	-	unprocessed_pseudogene	KNOWN	MED15P7	1	7	-0.048056
chr22	15690026	15721631	15705828	ENSG00000198062.14	+	protein_coding	KNOWN	POTEH	3	12	-0.089187
chr22	15699361	15703403	15701382	ENSG00000236666.1	-	antisense	KNOWN	POTEH-AS1	1	2	0.164661
chr22	15701459	15701565	15701512	ENSG00000212216.1	+	snRNA	KNOWN	RNU6-816P	1	1	0.164661
chr22	15721486	15722608	15722047	ENSG00000241838.3	+	processed_pseudogene	KNOWN	LA16c-3G11.7	1	1	-0.525064
chr22	15746630	15778297	15762463	ENSG00000225255.6	+	lincRNA	KNOWN	LINC01297	2	3	-0.403735
chr22	15749156	15750825	15749990	ENSG00000235992.1	-	processed_pseudogene	KNOWN	GRAMD4P2	1	2	-0.269874
chr22	15784959	15829984	15807471	ENSG00000206195.10	+	processed_transcript	KNOWN	DUXAP8	6	8	-0.417981
chr22	15796959	15798346	15797652	ENSG00000271127.1	+	sense_intronic	KNOWN	LL22NC03-N64E9.1	1	1	-0.439574
chr22	15805263	15820884	15813073	ENSG00000232775.6	-	transcribed_unprocessed_pseudogene	KNOWN	BMS1P22	3	3	-0.499087
chr22	15823197	15823890	15823543	ENSG00000272872.1	+	sense_intronic	KNOWN	LL22NC03-N14H11.1	1	1	-0.524981
chr22	15826566	15827187	15826876	ENSG00000271672.1	+	transcribed_processed_pseudogene	KNOWN	DUXAP8	1	1	-0.524981
chr22	15852990	15893942	15873466	ENSG00000223875.2	+	unprocessed_pseudogene	KNOWN	NBEAP3	1	5	-0.593306
chr22	15854195	15855243	15854719	ENSG00000215270.3	-	processed_pseudogene	KNOWN	LA16c-60H5.7	1	1	-0.420656
chr22	15901791	15901911	15901851	ENSG00000229286.1	+	unprocessed_pseudogene	KNOWN	LA16c-4G1.4	1	1	0.258184
chr22	15914721	15915800	15915260	ENSG00000233866.1	-	lincRNA	KNOWN	LA16c-4G1.3	1	2	0.037836
chr22	16141767	16141872	16141819	ENSG00000278188.1	+	snRNA	NOVEL	U6	1	1	-0.647417
chr22	16232345	16232425	16232385	ENSG00000278335.1	+	miRNA	NOVEL	AC092854.1	1	1	-0.198305
chr22	16387694	16390887	16389290	ENSG00000225293.1	+	unprocessed_pseudogene	KNOWN	ABCD1P4	1	4	0.684672
chr22	16405330	16405417	16405373	ENSG00000226160.1	+	processed_pseudogene	KNOWN	LA16c-17H1.3	1	1	-0.046772
chr22	16423943	16426031	16424987	ENSG00000229658.1	+	unprocessed_pseudogene	KNOWN	PABPC1P9	1	4	-0.128653
chr22	16428947	16476870	16452908	ENSG00000227367.1	-	unprocessed_pseudogene	KNOWN	SLC9B1P4	1	9	-0.402972
chr22	16486985	16488322	16487653	ENSG00000280263.1	+	processed_pseudogene	KNOWN	ACTR3BP2	1	1	-0.861549
chr22	16503304	16509475	16506389	ENSG00000235969.1	+	unprocessed_pseudogene	KNOWN	CHEK2P4	1	3	-0.478896
chr22	16521059	16527237	16524148	ENSG00000273362.1	+	lincRNA	KNOWN	KB-67B5.17	1	3	-0.264152
chr22	16572027	16574637	16573332	ENSG00000233995.1	+	unprocessed_pseudogene	KNOWN	KB-67B5.12	1	5	0.030591
chr22	16575363	16582707	16579035	ENSG00000239435.2	-	transcribed_unprocessed_pseudogene	KNOWN	KCNMB3P1	2	3	0.030591
chr22	16590751	16592810	16591780	ENSG00000198445.4	-	protein_coding	KNOWN	CCT8L2	1	1	-0.084165
chr22	16595089	16595485	16595287	ENSG00000240122.1	-	processed_pseudogene	KNOWN	FABP5P11	1	1	-0.084165
chr22	16598717	16598804	16598760	ENSG00000221084.1	-	miRNA	NOVEL	AP000547.1	1	1	-0.084165
chr22	16601887	16698742	16650314	ENSG00000100181.21	+	lincRNA	KNOWN	TPTEP1	11	9	-0.196934
chr22	16616170	16617114	16616642	ENSG00000267338.1	+	lincRNA	KNOWN	KB-7G2.9	1	2	-0.084165
chr22	16645695	16646581	16646138	ENSG00000249288.1	-	unprocessed_pseudogene	KNOWN	SLC25A15P5	1	2	-0.233995
chr22	16653892	16659628	16656760	ENSG00000249263.2	-	transcribed_unprocessed_pseudogene	KNOWN	PARP4P3	1	2	-0.187625
chr22	16654066	16675540	16664803	ENSG00000189295.13	-	processed_transcript	KNOWN	ANKRD62P1-PARP4P3	2	9	-0.196347
chr22	16671090	16679493	16675291	ENSG00000259271.1	-	transcribed_unprocessed_pseudogene	KNOWN	ANKRD62P1	1	6	-0.221425
chr22	16676016	16694648	16685332	ENSG00000273244.1	-	processed_transcript	KNOWN	KB-7G2.8	1	7	-0.275969
chr22	16690103	16704477	16697290	ENSG00000241717.1	-	transcribed_unprocessed_pseudogene	KNOWN	VWFP1	1	12	-0.440022
chr22	16746869	16748645	16747757	ENSG00000235343.1	-	lincRNA	KNOWN	AC005301.8	1	2	-0.757766
chr22	16783412	16821699	16802555	ENSG00000172967.7	-	protein_coding	KNOWN	XKR3	1	4	-0.451726
chr22	16827474	16829335	16828404	ENSG00000229027.3	+	transcribed_unprocessed_pseudogene	KNOWN	HSFY1P1	2	2	-0.609485
chr22	16837522	16837666	16837594	ENSG00000234121.1	+	processed_pseudogene	KNOWN	GPM6BP3	1	1	-0.579060
chr22	16855804	16856162	16855983	ENSG00000237835.1	+	processed_pseudogene	KNOWN	AC007064.22	1	1	-0.323046
chr22	16857619	16860718	16859168	ENSG00000220248.1	-	processed_pseudogene	KNOWN	ZNF402P	1	1	-0.323046
chr22	16869478	16871126	16870302	ENSG00000237689.1	+	lincRNA	KNOWN	AC007064.24	1	2	-0.244075
chr22	16876218	16876421	16876319	ENSG00000228122.1	-	processed_pseudogene	KNOWN	MTND1P17	1	1	-0.207568
chr22	16876552	16876902	16876727	ENSG00000237358.1	-	processed_pseudogene	KNOWN	AC007064.25	1	1	-0.207568
chr22	16897445	16897546	16897495	ENSG00000225480.1	+	processed_pseudogene	KNOWN	AC006548.19	1	1	-0.393435
chr22	16904219	16904696	16904457	ENSG00000230481.2	-	IG_V_pseudogene	KNOWN	IGKV1OR22-5	1	2	-0.393435
chr22	16914235	16914981	16914608	ENSG00000253691.2	-	IG_V_pseudogene	KNOWN	IGKV2OR22-4	1	2	-0.007088
chr22	16921443	16922173	16921808	ENSG00000253460.2	-	IG_V_pseudogene	KNOWN	IGKV2OR22-3	1	2	-0.007088
chr22	16925952	16926444	16926198	ENSG00000254264.2	-	IG_V_pseudogene	KNOWN	IGKV3OR22-2	1	2	-0.007088
chr22	16933521	16934003	16933762	ENSG00000253481.2	-	IG_V_pseudogene	KNOWN	IGKV1OR22-1	1	2	-0.256531
chr22	16950086	17034417	16992251	ENSG00000280156.1	-	sense_overlapping	KNOWN	AC006548.28	1	1	-0.126729
chr22	16961936	17008222	16985079	ENSG00000215568.7	-	protein_coding	KNOWN	GAB4	4	10	-0.007827
chr22	17012404	17012932	17012668	ENSG00000270226.1	+	processed_pseudogene	KNOWN	AC006548.26	1	1	-0.378328
chr22	17021398	17022570	17021984	ENSG00000276400.1	-	processed_pseudogene	KNOWN	VN1R9P	1	2	-0.378328
chr22	17036570	17060825	17048697	ENSG00000237438.6	+	lincRNA	KNOWN	CECR7	4	4	-0.232509
chr22	17067821	17070675	17069248	ENSG00000273203.1	+	lincRNA	KNOWN	AC006946.16	1	1	-0.287653
chr22	17080701	17081456	17081078	ENSG00000273442.1	+	lincRNA	KNOWN	AC006946.17	1	1	-0.013718
chr22	17084954	17115694	17100324	ENSG00000177663.13	+	protein_coding	KNOWN	IL17RA	4	13	0.442832
chr22	17093612	17093939	17093775	ENSG00000235328.1	-	processed_pseudogene	KNOWN	AC006946.12	1	1	0.533502
chr22	17116299	17121367	17118833	ENSG00000183307.3	-	protein_coding	KNOWN	CECR6	2	2	0.528856
chr22	17121586	17132104	17126845	ENSG00000235478.4	+	lincRNA	KNOWN	AC006946.15	2	4	0.487578
chr22	17137511	17165287	17151399	ENSG00000069998.12	-	protein_coding	KNOWN	CECR5	7	8	0.399785
chr22	17159384	17165445	17162414	ENSG00000185837.3	+	antisense	KNOWN	CECR5-AS1	2	2	0.462829
chr22	17178790	17221989	17200389	ENSG00000093072.15	-	protein_coding	KNOWN	CECR1	10	10	0.301539
chr22	17192936	17193308	17193122	ENSG00000236325.1	+	processed_pseudogene	KNOWN	AC005300.5	1	1	0.254930
chr22	17213516	17214155	17213835	ENSG00000203416.3	+	processed_pseudogene	KNOWN	FAM32B	1	2	0.196961
chr22	17256859	17266733	17261796	ENSG00000241832.1	-	lincRNA	KNOWN	CECR3	1	3	0.107933
chr22	17329034	17329232	17329133	ENSG00000231004.2	+	TEC	KNOWN	CECR9	1	1	0.150206
chr22	17352881	17353177	17353029	ENSG00000239547.3	-	misc_RNA	KNOWN	RN7SL843P	1	1	-0.068473
chr22	17359949	17558149	17459049	ENSG00000099954.18	+	protein_coding	KNOWN	CECR2	6	20	-0.038238
chr22	17418697	17419828	17419262	ENSG00000229492.1	+	processed_pseudogene	KNOWN	AC004019.10	1	1	-0.019369
chr22	17424388	17424775	17424581	ENSG00000232305.1	-	processed_pseudogene	KNOWN	CLCP1	1	1	-0.019369
chr22	17518676	17519029	17518852	ENSG00000228045.1	-	processed_pseudogene	KNOWN	DNAJA1P6	1	1	-0.051974
chr22	17563439	17590994	17577216	ENSG00000182902.13	+	protein_coding	KNOWN	SLC25A18	6	11	0.385652
chr22	17580157	17589192	17584674	ENSG00000236754.5	-	antisense	KNOWN	AC004019.13	2	4	0.430161
chr22	17592136	17628818	17610477	ENSG00000131100.12	-	protein_coding	KNOWN	ATP6V1E1	9	9	0.541128
chr22	17628855	17730855	17679855	ENSG00000099968.17	+	protein_coding	KNOWN	BCL2L13	17	7	0.355129
chr22	17734138	17774770	17754454	ENSG00000015475.18	-	protein_coding	KNOWN	BID	15	7	0.706096
chr22	17764180	17764259	17764219	ENSG00000264757.1	-	miRNA	KNOWN	MIR3198-1	1	1	0.937958
chr22	17777322	17779481	17778401	ENSG00000269220.1	+	lincRNA	KNOWN	LINC00528	1	1	0.648757
chr22	17787649	18024559	17906104	ENSG00000243156.7	-	protein_coding	KNOWN	MICAL3	19	32	0.607606
chr22	17787652	17811497	17799574	ENSG00000093100.13	-	processed_transcript	KNOWN	XXbac-B461K10.4	1	5	0.692341
chr22	17980868	17980961	17980914	ENSG00000207780.1	-	miRNA	KNOWN	MIR648	1	1	0.895501
chr22	17983205	17983619	17983412	ENSG00000235445.1	-	sense_intronic	KNOWN	XXbac-B476C20.14	1	2	0.895501
chr22	18004270	18007308	18005789	ENSG00000234913.1	-	sense_intronic	KNOWN	XXbac-B476C20.13	1	2	0.373012
chr22	18019214	18020200	18019707	ENSG00000237446.1	+	processed_pseudogene	KNOWN	RHEBP3	1	3	0.509310
chr22	18029385	18037968	18033676	ENSG00000235295.1	+	lincRNA	KNOWN	FLJ41941	1	2	0.333277
chr22	18076527	18078884	18077705	ENSG00000225335.3	-	antisense	KNOWN	XXbac-B476C20.9	3	2	0.772112
chr22	18077920	18131138	18104529	ENSG00000215193.12	+	protein_coding	KNOWN	PEX26	5	6	0.583177
chr22	18081466	18081675	18081570	ENSG00000236890.2	-	processed_pseudogene	KNOWN	XXbac-B476C20.11	1	1	0.772112
chr22	18101612	18101888	18101750	ENSG00000235617.1	+	unprocessed_pseudogene	KNOWN	XXbac-B476C20.10	1	1	0.511368
chr22	18102457	18103649	18103053	ENSG00000225225.1	-	processed_pseudogene	KNOWN	ARL2BPP10	1	2	0.511368
chr22	18110331	18146554	18128442	ENSG00000183785.14	+	protein_coding	KNOWN	TUBA8	5	5	0.497242
chr22	18110759	18131154	18120956	ENSG00000280007.1	-	antisense	KNOWN	AC008079.10	1	1	0.542845
chr22	18149899	18177397	18163648	ENSG00000184979.9	+	protein_coding	KNOWN	USP18	1	11	0.085040
chr22	18178038	18205915	18191976	ENSG00000187979.4	-	antisense	KNOWN	AC008079.9	1	9	0.045929
chr22	18340145	18345899	18343022	ENSG00000276160.1	+	unprocessed_pseudogene	KNOWN	GGTLC5P	1	7	0.828957
chr22	18361823	18391105	18376464	ENSG00000274044.4	-	lincRNA	KNOWN	AC011718.2	4	12	0.099972
chr22	18374106	18375689	18374897	ENSG00000276874.1	+	lincRNA	KNOWN	AC011718.3	1	2	-0.021048
chr22	18400407	18404206	18402306	ENSG00000275060.1	-	unprocessed_pseudogene	KNOWN	PPP1R26P3	1	1	-0.276790
chr22	18486999	18491247	18489123	ENSG00000277017.1	-	lincRNA	KNOWN	XXbac-B33L19.6	2	2	-0.035346
chr22	18487126	18500583	18493854	ENSG00000277870.4	+	lincRNA	KNOWN	FAM230A	3	5	-0.094626
chr22	18501794	18512187	18506990	ENSG00000278044.1	-	lincRNA	KNOWN	XXbac-B33L19.12	1	2	0.044503
chr22	18516344	18518161	18517252	ENSG00000274252.1	-	protein_coding	KNOWN	GGTLC3	1	6	0.662558
chr22	18524620	18524935	18524777	ENSG00000275319.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.662558
chr22	18527157	18527626	18527391	ENSG00000277690.2	+	processed_pseudogene	KNOWN	XXbac-B33L19.15	1	1	0.662558
chr22	18527802	18530573	18529187	ENSG00000278558.4	+	protein_coding	KNOWN	TMEM191B	7	9	0.749663
chr22	18533646	18577968	18555807	ENSG00000274602.4	-	transcribed_unprocessed_pseudogene	KNOWN	PI4KAP1	8	16	1.029897
chr22	18598750	18599065	18598907	ENSG00000280694.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.695333
chr22	18605355	18605497	18605426	ENSG00000274625.1	+	scaRNA	NOVEL	SCARNA17	1	1	0.695333
chr22	18605802	18606102	18605952	ENSG00000222630.2	-	misc_RNA	KNOWN	RN7SKP131	1	1	0.695333
chr22	18605815	18611919	18608867	ENSG00000275793.1	-	protein_coding	KNOWN	RIMBP3	1	1	0.752662
chr22	18615581	18615900	18615740	ENSG00000275362.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.877592
chr22	18623339	18625289	18624314	ENSG00000278110.1	-	unprocessed_pseudogene	KNOWN	XXbac-B33L19.10	1	4	0.877592
chr22	18636445	18638405	18637425	ENSG00000273907.1	-	unprocessed_pseudogene	KNOWN	CA15P2	1	5	1.075504
chr22	18650023	18653617	18651820	ENSG00000273643.1	-	processed_pseudogene	KNOWN	PPP1R26P2	1	1	0.063841
chr22	18715815	18719341	18717578	ENSG00000278008.1	+	processed_pseudogene	KNOWN	PPP1R26P4	1	1	0.220316
chr22	18733914	18757906	18745910	ENSG00000182824.7	+	lincRNA	KNOWN	AC008132.15	2	9	-0.189959
chr22	18773665	18843399	18808532	ENSG00000197421.9	-	transcribed_unprocessed_pseudogene	KNOWN	GGT3P	4	15	0.269945
chr22	18794414	18794804	18794609	ENSG00000239989.1	-	transcribed_processed_pseudogene	KNOWN	AC008132.14	1	1	0.347509
chr22	18833694	18834438	18834066	ENSG00000234764.2	+	processed_pseudogene	KNOWN	E2F6P1	1	1	0.216490
chr22	18846811	18861049	18853930	ENSG00000161103.11	+	transcribed_unprocessed_pseudogene	KNOWN	AC008132.13	4	6	0.500509
chr22	18855621	18858640	18857130	ENSG00000215544.6	-	unprocessed_pseudogene	KNOWN	BCRP7	1	4	0.582450
chr22	18873543	18894407	18883975	ENSG00000276095.2	-	lincRNA	KNOWN	AC008103.3	1	8	-0.058123
chr22	18883502	18884682	18884092	ENSG00000279987.1	-	sense_intronic	KNOWN	AC008103.4	1	1	-0.048871
chr22	18906028	18914238	18910133	ENSG00000183628.12	+	protein_coding	KNOWN	DGCR6	8	6	0.176696
chr22	18912777	18936553	18924665	ENSG00000100033.16	-	protein_coding	KNOWN	PRODH	15	15	0.557613
chr22	18945123	18946971	18946047	ENSG00000279560.1	+	protein_coding	KNOWN	AC007326.1	1	2	0.895501
chr22	18951934	18959512	18955723	ENSG00000280418.1	-	lincRNA	KNOWN	AC007326.10	1	1	0.462360
chr22	18970514	19031242	19000878	ENSG00000237517.8	+	antisense	KNOWN	DGCR5	5	6	0.496185
chr22	18997138	18997595	18997366	ENSG00000271275.1	-	processed_pseudogene	KNOWN	AC007326.9	1	1	0.524623
chr22	19017834	19020248	19019041	ENSG00000273032.1	+	lincRNA	KNOWN	DGCR9	1	1	0.255772
chr22	19018043	19018916	19018479	ENSG00000270393.1	-	processed_pseudogene	KNOWN	AC000095.9	1	1	0.255772
chr22	19023056	19023550	19023303	ENSG00000273164.1	+	sense_intronic	KNOWN	AC000095.11	1	1	0.255772
chr22	19031564	19034564	19033064	ENSG00000241527.1	-	unitary_pseudogene	KNOWN	CA15P1	1	8	0.909877
chr22	19036282	19122454	19079368	ENSG00000070413.18	-	protein_coding	KNOWN	DGCR2	8	11	0.517261
chr22	19045256	19045367	19045311	ENSG00000206739.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.909877
chr22	19046162	19048375	19047268	ENSG00000273311.1	-	sense_intronic	KNOWN	DGCR11	1	1	0.909877
chr22	19055801	19056512	19056156	ENSG00000237347.2	+	processed_pseudogene	KNOWN	AC004461.4	1	2	0.356265
chr22	19061041	19061843	19061442	ENSG00000281530.1	-	sense_intronic	KNOWN	DGCR12	1	1	0.356265
chr22	19121529	19124503	19123016	ENSG00000223461.1	+	antisense	KNOWN	AC004471.9	1	2	0.448826
chr22	19124309	19128449	19126379	ENSG00000272682.1	-	lincRNA	KNOWN	AC004471.10	1	3	0.448826
chr22	19124879	19125646	19125262	ENSG00000231086.1	+	unitary_pseudogene	KNOWN	TSSK1A	1	1	0.448826
chr22	19130279	19144684	19137481	ENSG00000100056.11	-	protein_coding	KNOWN	DGCR14	4	10	1.091992
chr22	19130808	19132623	19131715	ENSG00000206203.4	+	protein_coding	KNOWN	TSSK2	1	1	1.091992
chr22	19148576	19150283	19149429	ENSG00000063515.2	-	protein_coding	KNOWN	GSC2	1	3	1.070455
chr22	19171395	19172839	19172117	ENSG00000260924.2	+	antisense	KNOWN	LINC01311	1	1	1.194910
chr22	19175575	19178830	19177202	ENSG00000100075.9	-	protein_coding	KNOWN	SLC25A1	5	9	1.194910
chr22	19179473	19291716	19235594	ENSG00000070371.15	-	protein_coding	KNOWN	CLTCL1	12	33	0.713008
chr22	19238443	19238739	19238591	ENSG00000230194.1	-	processed_pseudogene	KNOWN	AC000081.2	1	1	0.658441
chr22	19249873	19249966	19249919	ENSG00000251940.1	+	snoRNA	NOVEL	SNORA15	1	1	0.658441
chr22	19257520	19258806	19258163	ENSG00000233471.2	+	processed_pseudogene	KNOWN	KRT18P62	1	1	0.802996
chr22	19330698	19447450	19389074	ENSG00000100084.14	-	protein_coding	KNOWN	HIRA	4	25	0.656794
chr22	19351368	19448232	19399800	ENSG00000242259.8	-	protein_coding	KNOWN	C22orf39	6	24	0.682999
chr22	19365766	19366044	19365905	ENSG00000244296.3	+	misc_RNA	KNOWN	RN7SL168P	1	1	0.720023
chr22	19431902	19436075	19433988	ENSG00000185608.8	+	protein_coding	KNOWN	MRPL40	3	4	0.776490
chr22	19447893	19450105	19448999	ENSG00000185065.6	+	antisense	KNOWN	AC000068.5	1	2	0.766950
chr22	19449910	19479215	19464562	ENSG00000070010.18	-	protein_coding	KNOWN	UFD1L	10	12	0.631775
chr22	19454179	19454605	19454392	ENSG00000273300.1	+	antisense	KNOWN	AC000068.9	1	1	0.577419
chr22	19456503	19456962	19456732	ENSG00000273212.1	+	antisense	KNOWN	AC000068.10	1	1	0.577419
chr22	19479459	19520612	19500035	ENSG00000093009.9	+	protein_coding	KNOWN	CDC45	12	20	0.522203
chr22	19523024	19527545	19525284	ENSG00000184113.9	-	protein_coding	KNOWN	CLDN5	4	2	0.493242
chr22	19565203	19566839	19566021	ENSG00000281548.1	-	lincRNA	KNOWN	LINC00895	1	1	0.505002
chr22	19630750	19633574	19632162	ENSG00000230485.1	-	processed_pseudogene	KNOWN	AC000077.2	1	3	0.559771
chr22	19667023	19667555	19667289	ENSG00000225007.1	+	lincRNA	KNOWN	AC000067.1	1	2	0.679797
chr22	19714464	19724772	19719618	ENSG00000184702.17	+	protein_coding	KNOWN	SEPT5	16	12	0.773001
chr22	19722945	19724771	19723858	ENSG00000203618.5	+	protein_coding	KNOWN	GP1BB	1	2	0.773001
chr22	19756703	19783593	19770148	ENSG00000184058.12	+	protein_coding	KNOWN	TBX1	6	10	0.935785
chr22	19783224	19854939	19819081	ENSG00000185838.13	-	protein_coding	KNOWN	GNB1L	6	8	0.819489
chr22	19792294	19793094	19792694	ENSG00000235776.2	+	processed_pseudogene	KNOWN	AC000089.3	1	1	0.621940
chr22	19846138	19854896	19850517	ENSG00000215012.8	-	protein_coding	KNOWN	C22orf29	5	3	0.781577
chr22	19875517	19941992	19908754	ENSG00000184470.20	-	protein_coding	KNOWN	TXNRD2	21	18	0.896056
chr22	19887289	19887970	19887629	ENSG00000232926.1	+	processed_pseudogene	KNOWN	AC000078.5	1	1	0.972082
chr22	19941607	19969975	19955791	ENSG00000093010.11	+	protein_coding	KNOWN	COMT	11	7	0.863241
chr22	19963753	19963834	19963793	ENSG00000265087.1	+	miRNA	KNOWN	MIR4761	1	1	0.979292
chr22	19969896	20016808	19993352	ENSG00000099889.13	-	protein_coding	KNOWN	ARVCF	11	20	1.129318
chr22	20017014	20065926	20041470	ENSG00000183597.15	+	protein_coding	KNOWN	TANGO2	26	9	0.867294
chr22	20033133	20033241	20033187	ENSG00000208023.2	+	miRNA	KNOWN	MIR185	1	1	1.052583
chr22	20058030	20070569	20064299	ENSG00000236540.7	-	antisense	KNOWN	AC006547.13	11	4	0.696681
chr22	20064552	20065705	20065128	ENSG00000268292.1	-	antisense	KNOWN	AC006547.15	1	2	0.689893
chr22	20070716	20070965	20070840	ENSG00000277950.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.839226
chr22	20080232	20111877	20096054	ENSG00000128191.13	+	protein_coding	KNOWN	DGCR8	10	14	1.176879
chr22	20085746	20085833	20085789	ENSG00000266567.1	+	miRNA	KNOWN	MIR3618	1	1	0.839226
chr22	20086042	20086150	20086096	ENSG00000221366.2	+	miRNA	KNOWN	MIR1306	1	1	0.839226
chr22	20110821	20111875	20111348	ENSG00000243762.1	-	antisense	KNOWN	AC006547.8	1	2	0.999963
chr22	20111866	20117392	20114629	ENSG00000099899.14	-	protein_coding	KNOWN	TRMT2A	20	13	0.999963
chr22	20114686	20114751	20114718	ENSG00000278278.1	-	miRNA	KNOWN	MIR6816	1	1	0.999963
chr22	20115938	20127357	20121647	ENSG00000099901.16	+	protein_coding	KNOWN	RANBP1	14	6	0.999963
chr22	20126402	20126526	20126464	ENSG00000264346.1	+	snoRNA	NOVEL	SNORA77	1	1	0.999963
chr22	20129456	20148007	20138731	ENSG00000099904.15	+	protein_coding	KNOWN	ZDHHC8	7	11	1.214539
chr22	20148427	20151065	20149746	ENSG00000234409.6	-	protein_coding	KNOWN	CCDC188	2	9	1.196314
chr22	20198729	20204918	20201823	ENSG00000249923.1	-	antisense	KNOWN	XXbac-B444P24.8	1	4	1.204018
chr22	20206397	20208524	20207460	ENSG00000236499.2	+	lincRNA	KNOWN	LINC00896	2	1	1.204018
chr22	20241415	20283246	20262330	ENSG00000040608.13	-	protein_coding	KNOWN	RTN4R	6	3	1.076151
chr22	20249125	20249235	20249180	ENSG00000221039.2	-	miRNA	KNOWN	MIR1286	1	1	1.112456
chr22	20299760	20313216	20306488	ENSG00000161132.6	+	unprocessed_pseudogene	KNOWN	XXbac-B444P24.10	1	10	0.855157
chr22	20314276	20320080	20317178	ENSG00000128185.9	-	protein_coding	KNOWN	DGCR6L	3	5	1.005577
chr22	20318119	20318749	20318434	ENSG00000273343.1	-	sense_intronic	KNOWN	XXbac-B444P24.13	1	1	1.005577
chr22	20320739	20321203	20320971	ENSG00000273139.1	+	lincRNA	KNOWN	XXbac-B444P24.14	1	1	1.005577
chr22	20338805	20354372	20346588	ENSG00000188280.11	+	antisense	KNOWN	AC007731.1	3	8	0.197682
chr22	20343203	20344365	20343784	ENSG00000235578.1	-	lincRNA	KNOWN	XXbac-B33L19.4	1	2	0.171218
chr22	20350578	20390758	20370668	ENSG00000161133.16	-	protein_coding	KNOWN	USP41	4	13	0.462999
chr22	20394115	20408461	20401288	ENSG00000185252.17	+	protein_coding	KNOWN	ZNF74	10	7	0.633504
chr22	20416797	20416899	20416848	ENSG00000207343.1	-	snRNA	KNOWN	RNU6-225P	1	1	1.125712
chr22	20424585	20437859	20431222	ENSG00000244486.7	-	protein_coding	KNOWN	SCARF2	4	14	1.222660
chr22	20429241	20446620	20437930	ENSG00000277971.1	-	protein_coding	KNOWN	XXbac-B562F10.12	1	5	1.282297
chr22	20441519	20495883	20468701	ENSG00000099910.16	-	protein_coding	KNOWN	KLHL22	12	7	0.962623
chr22	20450122	20451824	20450973	ENSG00000215493.3	+	processed_pseudogene	KNOWN	XXbac-B562F10.11	1	1	0.923594
chr22	20475203	20475311	20475257	ENSG00000255156.1	-	misc_RNA	KNOWN	RNY1P9	1	1	0.872823
chr22	20481158	20481268	20481213	ENSG00000201916.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.872823
chr22	20481935	20482213	20482074	ENSG00000242876.3	-	misc_RNA	KNOWN	RN7SL812P	1	1	0.872823
chr22	20482815	20484105	20483460	ENSG00000236670.1	-	processed_pseudogene	KNOWN	KRT18P5	1	1	0.872823
chr22	20483225	20483316	20483270	ENSG00000265300.1	-	miRNA	NOVEL	AC007731.2	1	1	0.872823
chr22	20495913	20587632	20541772	ENSG00000099917.17	+	protein_coding	KNOWN	MED15	31	18	0.895620
chr22	20522070	20523870	20522970	ENSG00000236003.1	-	antisense	KNOWN	AC007050.17	1	3	0.905579
chr22	20587496	20592218	20589857	ENSG00000250261.1	-	unprocessed_pseudogene	KNOWN	CCDC74BP1	1	6	0.821256
chr22	20602595	20656914	20629754	ENSG00000223553.5	-	transcribed_unprocessed_pseudogene	KNOWN	SMPD4P1	3	18	0.962540
chr22	20632619	20632751	20632685	ENSG00000276427.1	+	unprocessed_pseudogene	KNOWN	IGLL4P	1	1	0.954939
chr22	20652730	20654750	20653740	ENSG00000238125.1	+	processed_pseudogene	KNOWN	SLC9A3P2	1	1	0.605847
chr22	20657035	20657116	20657075	ENSG00000264718.1	+	miRNA	NOVEL	AC007050.1	1	1	0.605847
chr22	20667836	20670984	20669410	ENSG00000229107.2	-	processed_pseudogene	KNOWN	ABHD17AP4	1	2	0.627112
chr22	20689929	20698938	20694433	ENSG00000217261.4	+	transcribed_unprocessed_pseudogene	KNOWN	POM121L4P	2	5	0.842980
chr22	20697962	20698934	20698448	ENSG00000235062.4	-	unprocessed_pseudogene	KNOWN	BCRP5	1	2	0.844305
chr22	20701114	20704606	20702860	ENSG00000226287.7	+	processed_transcript	KNOWN	TMEM191A	10	8	0.844305
chr22	20707691	20859417	20783554	ENSG00000241973.10	-	protein_coding	KNOWN	PI4KA	18	55	0.816815
chr22	20773879	20787720	20780799	ENSG00000099937.10	+	protein_coding	KNOWN	SERPIND1	2	5	0.901714
chr22	20858983	20891218	20875100	ENSG00000099940.11	+	protein_coding	KNOWN	SNAP29	3	5	0.700681
chr22	20889206	20891214	20890210	ENSG00000272600.1	-	antisense	KNOWN	AC007308.7	1	2	0.850144
chr22	20917426	20953749	20935587	ENSG00000099942.12	+	protein_coding	KNOWN	CRKL	2	4	0.781960
chr22	20957092	20964679	20960885	ENSG00000237476.1	+	lincRNA	KNOWN	XXbac-B135H6.15	1	2	0.823604
chr22	20965108	20981360	20973234	ENSG00000183773.15	+	protein_coding	KNOWN	AIFM3	18	21	1.023446
chr22	20979462	20999038	20989250	ENSG00000099949.18	+	protein_coding	KNOWN	LZTR1	18	22	1.146862
chr22	20981361	20981755	20981558	ENSG00000272829.1	-	lincRNA	KNOWN	XXbac-B135H6.18	1	1	1.109479
chr22	20999104	21002196	21000650	ENSG00000184436.11	-	protein_coding	KNOWN	THAP7	8	5	1.190440
chr22	21001886	21010342	21006114	ENSG00000230513.1	+	antisense	KNOWN	THAP7-AS1	3	2	1.183462
chr22	21002895	21014292	21008593	ENSG00000161149.11	-	transcribed_unprocessed_pseudogene	KNOWN	TUBA3FP	3	4	1.125640
chr22	21009808	21028830	21019319	ENSG00000099957.16	+	protein_coding	KNOWN	P2RX6	9	13	1.020138
chr22	21028718	21032840	21030779	ENSG00000099960.12	-	protein_coding	KNOWN	SLC7A4	3	5	1.050991
chr22	21031357	21043969	21037663	ENSG00000226872.1	+	antisense	KNOWN	AC002472.11	1	3	1.065681
chr22	21034176	21034272	21034224	ENSG00000207575.1	-	miRNA	KNOWN	MIR649	1	1	1.065681
chr22	21035243	21045017	21040130	ENSG00000206145.8	-	transcribed_unprocessed_pseudogene	KNOWN	P2RX6P	2	4	1.065681
chr22	21045960	21064168	21055064	ENSG00000187905.10	+	protein_coding	KNOWN	LRRC74B	4	11	1.056392
chr22	21065462	21070097	21067779	ENSG00000249680.2	+	unprocessed_pseudogene	KNOWN	TUBA3GP	1	4	1.047660
chr22	21103016	21122285	21112650	ENSG00000169668.11	+	transcribed_unprocessed_pseudogene	KNOWN	BCRP2	4	6	0.629577
chr22	21114607	21124451	21119529	ENSG00000197210.7	-	lincRNA	KNOWN	KB-1592A4.15	1	6	0.496645
chr22	21125660	21128063	21126861	ENSG00000239511.2	-	protein_coding	KNOWN	POM121L7	1	1	0.496645
chr22	21141624	21142371	21141997	ENSG00000224688.1	-	processed_pseudogene	KNOWN	E2F6P2	1	1	0.283782
chr22	21167758	21302681	21235219	ENSG00000215498.8	+	processed_transcript	KNOWN	FAM230B	9	12	0.219067
chr22	21177892	21179875	21178883	ENSG00000234503.1	-	lincRNA	KNOWN	KB-1592A4.14	1	2	-0.080412
chr22	21207973	21227637	21217805	ENSG00000133475.16	-	protein_coding	KNOWN	GGT2	3	15	0.518548
chr22	21268161	21268903	21268532	ENSG00000226885.1	+	processed_pseudogene	KNOWN	E2F6P3	1	1	0.165413
chr22	21282881	21284161	21283521	ENSG00000229266.1	+	processed_pseudogene	KNOWN	POM121L8P	1	1	0.141394
chr22	21290760	21294586	21292673	ENSG00000169662.8	-	unprocessed_pseudogene	KNOWN	BCRP6	1	5	0.515800
chr22	21300990	21325042	21313016	ENSG00000206142.9	-	lincRNA	KNOWN	KB-1183D5.13	9	12	0.181100
chr22	21312920	21314904	21313912	ENSG00000237407.1	+	lincRNA	KNOWN	KB-1183D5.14	1	2	-0.019346
chr22	21341595	21345258	21343426	ENSG00000232771.2	+	processed_pseudogene	KNOWN	PPP1R26P5	1	1	-0.074711
chr22	21354563	21355763	21355163	ENSG00000279920.1	+	lincRNA	KNOWN	KB-1183D5.18	1	2	0.121893
chr22	21370064	21371945	21371004	ENSG00000226534.1	+	processed_pseudogene	KNOWN	KB-1183D5.16	1	4	0.953015
chr22	21379382	21379701	21379541	ENSG00000273846.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.953015
chr22	21383374	21389478	21386426	ENSG00000274600.1	+	protein_coding	KNOWN	RIMBP3B	1	1	0.953015
chr22	21389191	21389491	21389341	ENSG00000200057.1	+	misc_RNA	KNOWN	RN7SKP63	1	1	0.953015
chr22	21389796	21389938	21389867	ENSG00000252020.1	-	scaRNA	NOVEL	SCARNA17	1	1	0.953015
chr22	21396273	21396590	21396431	ENSG00000275840.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.869599
chr22	21417404	21451463	21434433	ENSG00000169635.9	+	protein_coding	KNOWN	HIC2	3	3	0.866285
chr22	21463963	21464279	21464121	ENSG00000276800.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.087390
chr22	21466423	21471269	21468846	ENSG00000206140.9	+	lincRNA	KNOWN	TMEM191C	14	10	1.066735
chr22	21473000	21517533	21495266	ENSG00000183506.16	-	transcribed_unprocessed_pseudogene	KNOWN	PI4KAP2	13	18	0.858062
chr22	21538285	21538601	21538443	ENSG00000281629.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.804710
chr22	21544897	21545039	21544968	ENSG00000252143.1	+	scaRNA	NOVEL	SCARNA17	1	1	0.804710
chr22	21545344	21545644	21545494	ENSG00000222352.1	-	misc_RNA	KNOWN	RN7SKP221	1	1	0.804710
chr22	21545357	21551461	21548409	ENSG00000183246.6	-	protein_coding	KNOWN	RIMBP3C	2	1	0.847262
chr22	21549447	21624034	21586740	ENSG00000185651.14	+	protein_coding	KNOWN	UBE2L3	4	4	0.836333
chr22	21555138	21555457	21555297	ENSG00000275293.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.982367
chr22	21628089	21630064	21629076	ENSG00000161179.13	-	protein_coding	KNOWN	YDJC	7	5	0.517852
chr22	21632716	21637327	21635021	ENSG00000161180.10	+	protein_coding	KNOWN	CCDC116	3	5	0.891693
chr22	21640844	21641284	21641064	ENSG00000273342.1	+	lincRNA	KNOWN	KB-1440D3.14	1	1	0.891693
chr22	21642261	21644298	21643279	ENSG00000128228.4	+	protein_coding	KNOWN	SDF2L1	2	3	0.891693
chr22	21652270	21700015	21676142	ENSG00000100023.17	+	protein_coding	KNOWN	PPIL2	13	22	0.844217
chr22	21652981	21653058	21653019	ENSG00000212102.1	+	miRNA	KNOWN	MIR301B	1	1	0.830794
chr22	21653304	21653385	21653344	ENSG00000207751.1	+	miRNA	KNOWN	MIR130B	1	1	0.830794
chr22	21661934	21662363	21662148	ENSG00000272954.1	+	sense_intronic	KNOWN	KB-1440D3.13	1	1	0.830794
chr22	21697544	21735834	21716689	ENSG00000100027.14	-	protein_coding	KNOWN	YPEL1	3	5	0.914577
chr22	21722895	21723182	21723038	ENSG00000244671.3	-	misc_RNA	KNOWN	RN7SL280P	1	1	0.856438
chr22	21754500	21867680	21811090	ENSG00000100030.14	-	protein_coding	KNOWN	MAPK1	4	9	0.526483
chr22	21792434	21792524	21792479	ENSG00000200985.1	+	rRNA	KNOWN	RNA5SP493	1	1	0.366614
chr22	21885282	21885673	21885477	ENSG00000225544.1	-	processed_pseudogene	KNOWN	KB-1027C11.4	1	1	0.427412
chr22	21919420	21952837	21936128	ENSG00000100034.13	-	protein_coding	KNOWN	PPM1F	10	8	0.967096
chr22	21938293	21977632	21957962	ENSG00000224086.5	+	antisense	KNOWN	LL22NC03-86G7.1	1	2	1.000146
chr22	21957025	21982816	21969920	ENSG00000100038.19	-	protein_coding	KNOWN	TOP3B	17	18	0.853315
chr22	21991099	22043934	22017516	ENSG00000197549.9	-	transcribed_unprocessed_pseudogene	KNOWN	PRAMENP	3	7	0.119522
chr22	22026076	22026593	22026334	ENSG00000253239.1	+	IG_V_pseudogene	KNOWN	IGLVI-70	1	2	-0.090212
chr22	22030934	22031472	22031203	ENSG00000211637.2	+	IG_V_gene	KNOWN	IGLV4-69	1	2	0.112750
chr22	22032745	22033194	22032969	ENSG00000254355.1	+	IG_V_pseudogene	KNOWN	IGLVI-68	1	2	0.112750
chr22	22036344	22040065	22038204	ENSG00000278657.1	+	lincRNA	KNOWN	LL22NC03-23C6.13	1	2	0.112750
chr22	22038643	22039126	22038884	ENSG00000249333.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-23C6.12	1	2	0.112750
chr22	22043618	22043942	22043780	ENSG00000253794.1	+	IG_V_pseudogene	KNOWN	IGLV10-67	1	1	0.112750
chr22	22046430	22046591	22046510	ENSG00000228161.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-23C6.15	1	1	0.112750
chr22	22058433	22058892	22058662	ENSG00000253874.1	+	IG_V_pseudogene	KNOWN	IGLVIV-66-1	1	1	-0.015537
chr22	22061077	22061538	22061307	ENSG00000254075.1	+	IG_V_pseudogene	KNOWN	IGLVV-66	1	2	-0.015537
chr22	22070225	22070707	22070466	ENSG00000254161.1	+	IG_V_pseudogene	KNOWN	IGLVIV-65	1	2	-0.103673
chr22	22075366	22075666	22075516	ENSG00000253242.1	+	IG_V_pseudogene	KNOWN	IGLVIV-64	1	1	-0.103673
chr22	22079770	22080263	22080016	ENSG00000253752.1	+	IG_V_pseudogene	KNOWN	IGLVI-63	1	2	-0.103673
chr22	22086561	22087110	22086835	ENSG00000253823.1	+	IG_V_pseudogene	KNOWN	IGLV1-62	1	2	-0.103673
chr22	22087924	22088085	22088004	ENSG00000275361.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-88E1.18	1	1	-0.103673
chr22	22098700	22099212	22098956	ENSG00000211638.2	+	IG_V_gene	KNOWN	IGLV8-61	1	2	-0.153121
chr22	22103219	22104857	22104038	ENSG00000225741.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-88E1.17	1	2	-0.153121
chr22	22114844	22118005	22116424	ENSG00000263366.2	-	processed_pseudogene	KNOWN	ABHD17AP5	1	2	0.058044
chr22	22155582	22155942	22155762	ENSG00000236118.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-30E12.10	1	2	-0.482554
chr22	22157382	22157631	22157506	ENSG00000233720.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-30E12.11	1	1	-0.482554
chr22	22162199	22162681	22162440	ENSG00000211639.2	+	IG_V_gene	KNOWN	IGLV4-60	1	2	-0.482554
chr22	22168289	22168634	22168461	ENSG00000227710.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-30E12.13	1	1	-0.482554
chr22	22170983	22171556	22171269	ENSG00000224465.1	-	processed_pseudogene	KNOWN	SOCS2P2	1	1	0.228771
chr22	22179228	22179477	22179352	ENSG00000254308.1	+	IG_V_pseudogene	KNOWN	IGLVIV-59	1	1	0.228771
chr22	22182582	22182885	22182733	ENSG00000253637.1	+	IG_V_pseudogene	KNOWN	IGLVV-58	1	1	0.228771
chr22	22185941	22186619	22186280	ENSG00000236323.1	+	processed_pseudogene	KNOWN	BMP6P1	1	1	0.228771
chr22	22195713	22196460	22196086	ENSG00000211640.3	+	IG_V_gene	KNOWN	IGLV6-57	1	2	0.019842
chr22	22198560	22199011	22198785	ENSG00000253126.1	+	IG_V_pseudogene	KNOWN	IGLVI-56	1	2	0.019842
chr22	22201663	22202206	22201934	ENSG00000211641.2	+	IG_V_gene	KNOWN	IGLV11-55	1	2	0.019842
chr22	22214794	22215270	22215032	ENSG00000211642.2	+	IG_V_gene	KNOWN	IGLV10-54	1	2	0.252883
chr22	22219647	22220133	22219890	ENSG00000253935.1	+	IG_V_pseudogene	KNOWN	IGLVIV-53	1	2	0.252883
chr22	22223187	22224566	22223876	ENSG00000228050.1	-	processed_pseudogene	KNOWN	TOP3BP1	1	1	0.252883
chr22	22228719	22230469	22229594	ENSG00000234726.1	-	processed_pseudogene	KNOWN	LL22NC03-123E1.5	1	2	0.297415
chr22	22244675	22245515	22245095	ENSG00000169575.4	+	protein_coding	KNOWN	VPREB1	2	2	0.418694
chr22	22264601	22273020	22268810	ENSG00000279278.1	+	lincRNA	KNOWN	CH17-264L24.1	1	1	-0.040875
chr22	22283928	22287220	22285574	ENSG00000274422.1	-	lincRNA	KNOWN	LL22NC03-2H8.5	1	1	-0.227237
chr22	22293733	22294794	22294263	ENSG00000234630.1	+	lincRNA	KNOWN	LL22NC03-2H8.4	1	2	0.282176
chr22	22303224	22310401	22306812	ENSG00000272779.1	+	transcribed_unprocessed_pseudogene	KNOWN	LL22NC03-80A10.6	1	8	0.287419
chr22	22303224	22322847	22313035	ENSG00000236850.4	+	processed_transcript	KNOWN	BMS1P20	1	10	0.343466
chr22	22318727	22319226	22318976	ENSG00000211643.2	+	IG_V_gene	KNOWN	IGLV5-52	1	2	0.375785
chr22	22322472	22322980	22322726	ENSG00000211644.2	+	IG_V_gene	KNOWN	IGLV1-51	1	2	0.375785
chr22	22327300	22327814	22327557	ENSG00000211645.2	+	IG_V_gene	KNOWN	IGLV1-50	1	2	0.375785
chr22	22339573	22341214	22340393	ENSG00000225724.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-80A10.11	1	1	0.091992
chr22	22343187	22343732	22343459	ENSG00000223350.2	+	IG_V_gene	KNOWN	IGLV9-49	1	2	0.091992
chr22	22347807	22348164	22347985	ENSG00000232515.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-75A1.9	1	1	0.091992
chr22	22352940	22353433	22353186	ENSG00000211647.1	+	IG_V_gene	KNOWN	IGLV5-48	1	2	0.091992
chr22	22357739	22358260	22357999	ENSG00000211648.2	+	IG_V_gene	KNOWN	IGLV1-47	1	2	0.091992
chr22	22366210	22367770	22366990	ENSG00000237428.1	+	processed_pseudogene	KNOWN	LL22NC03-22A12.9	1	1	0.091992
chr22	22369614	22370087	22369850	ENSG00000211649.3	+	IG_V_gene	KNOWN	IGLV7-46	1	2	0.069797
chr22	22370829	22371120	22370974	ENSG00000232603.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-22A12.12	1	1	-0.027307
chr22	22375986	22376505	22376245	ENSG00000211650.2	+	IG_V_gene	KNOWN	IGLV5-45	1	2	-0.027307
chr22	22380766	22381347	22381056	ENSG00000211651.3	+	IG_V_gene	KNOWN	IGLV1-44	1	2	-0.027307
chr22	22395018	22395489	22395253	ENSG00000211652.2	+	IG_V_gene	KNOWN	IGLV7-43	1	2	0.062090
chr22	22397032	22397524	22397278	ENSG00000254175.1	+	IG_V_pseudogene	KNOWN	IGLVI-42	1	2	0.062090
chr22	22398849	22398999	22398924	ENSG00000254073.1	+	IG_V_pseudogene	KNOWN	IGLVVII-41-1	1	1	0.062090
chr22	22404207	22404721	22404464	ENSG00000253818.1	+	IG_V_pseudogene	KNOWN	IGLV1-41	1	2	0.062090
chr22	22409766	22410282	22410024	ENSG00000211653.2	+	IG_V_gene	KNOWN	IGLV1-40	1	2	-0.061131
chr22	22420326	22421310	22420818	ENSG00000224144.1	+	processed_pseudogene	KNOWN	ASH2LP1	1	1	-0.162581
chr22	22425821	22426314	22426067	ENSG00000253889.1	+	IG_V_pseudogene	KNOWN	IGLVI-38	1	2	-0.162581
chr22	22427540	22428035	22427787	ENSG00000211654.2	+	IG_V_gene	KNOWN	IGLV5-37	1	2	-0.162581
chr22	22431958	22432465	22432211	ENSG00000211655.3	+	IG_V_gene	KNOWN	IGLV1-36	1	2	-0.025246
chr22	22446686	22448336	22447511	ENSG00000230821.1	+	processed_pseudogene	KNOWN	KB-288A10.17	1	1	-0.025246
chr22	22450202	22450652	22450427	ENSG00000253631.1	+	IG_V_pseudogene	KNOWN	IGLV7-35	1	2	0.007329
chr22	22465659	22465986	22465822	ENSG00000226595.1	+	unprocessed_pseudogene	KNOWN	KB-288A10.19	1	1	0.007329
chr22	22484421	22509154	22496787	ENSG00000275004.3	-	protein_coding	KNOWN	ZNF280B	3	5	-0.482552
chr22	22513736	22520270	22517003	ENSG00000169548.3	-	protein_coding	KNOWN	ZNF280A	1	2	-0.263273
chr22	22547701	22559361	22553531	ENSG00000185686.17	-	protein_coding	KNOWN	PRAME	14	6	0.229265
chr22	22559343	22566602	22562972	ENSG00000220891.1	+	antisense	KNOWN	LL22NC03-63E9.3	1	3	0.322289
chr22	22580014	22580296	22580155	ENSG00000253120.1	+	IG_V_pseudogene	KNOWN	IGLV2-34	1	1	-0.065248
chr22	22588155	22588688	22588421	ENSG00000211656.3	+	IG_V_gene	KNOWN	IGLV2-33	1	2	-0.065248
chr22	22594528	22595056	22594792	ENSG00000211657.3	+	IG_V_gene	KNOWN	IGLV3-32	1	2	0.239334
chr22	22604445	22605165	22604805	ENSG00000253920.1	+	IG_V_pseudogene	KNOWN	IGLV3-31	1	2	0.239334
chr22	22618572	22619163	22618867	ENSG00000253329.1	+	IG_V_pseudogene	KNOWN	IGLV3-30	1	2	0.272073
chr22	22630061	22636153	22633107	ENSG00000215456.5	+	unprocessed_pseudogene	KNOWN	BCRP4	1	7	0.671936
chr22	22639177	22644473	22641825	ENSG00000183169.6	-	transcribed_unprocessed_pseudogene	KNOWN	POM121L1P	2	2	0.671936
chr22	22644475	22647903	22646189	ENSG00000100121.12	+	protein_coding	KNOWN	GGTLC2	5	6	0.671936
chr22	22661299	22661542	22661420	ENSG00000253338.1	+	IG_V_pseudogene	KNOWN	IGLV3-29	1	1	0.795750
chr22	22664428	22664523	22664475	ENSG00000207834.1	+	miRNA	NOVEL	AC244250.2	1	1	0.795750
chr22	22664473	22664907	22664690	ENSG00000253451.1	+	IG_V_pseudogene	KNOWN	IGLV2-28	1	2	0.795750
chr22	22668288	22668806	22668547	ENSG00000211658.2	+	IG_V_gene	KNOWN	IGLV3-27	1	2	0.795750
chr22	22673152	22673602	22673377	ENSG00000253913.1	+	IG_V_pseudogene	KNOWN	IGLV3-26	1	2	-0.044787
chr22	22679097	22679345	22679221	ENSG00000253779.1	+	IG_V_pseudogene	KNOWN	IGLVVI-25-1	1	1	-0.044787
chr22	22686726	22687271	22686998	ENSG00000211659.2	+	IG_V_gene	KNOWN	IGLV3-25	1	2	-0.044787
chr22	22689831	22689978	22689904	ENSG00000232350.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-102D1.16	1	1	-0.044787
chr22	22692778	22693312	22693045	ENSG00000223999.1	-	lincRNA	KNOWN	LL22NC03-102D1.18	1	2	0.150290
chr22	22694439	22694952	22694695	ENSG00000253822.1	+	IG_V_pseudogene	KNOWN	IGLV3-24	1	2	0.150290
chr22	22697789	22698407	22698098	ENSG00000211660.3	+	IG_V_gene	KNOWN	IGLV2-23	1	2	0.150290
chr22	22697906	22698000	22697953	ENSG00000207830.1	+	miRNA	NOVEL	AC244250.1	1	1	0.150290
chr22	22700760	22700970	22700865	ENSG00000253546.1	+	IG_V_pseudogene	KNOWN	IGLVVI-22-1	1	1	0.150290
chr22	22704265	22704822	22704543	ENSG00000211661.2	+	IG_V_gene	KNOWN	IGLV3-22	1	2	0.150290
chr22	22711689	22713203	22712446	ENSG00000211662.2	+	IG_V_gene	KNOWN	IGLV3-21	1	3	0.351636
chr22	22715290	22715419	22715354	ENSG00000254240.1	+	IG_V_pseudogene	KNOWN	IGLVI-20	1	1	0.351636
chr22	22720623	22721145	22720884	ENSG00000211663.2	+	IG_V_gene	KNOWN	IGLV3-19	1	2	0.351636
chr22	22730725	22731090	22730907	ENSG00000278667.1	-	processed_pseudogene	KNOWN	LL22NC03-48A11.14	1	1	-0.034185
chr22	22734575	22734669	22734622	ENSG00000264629.1	+	miRNA	NOVEL	AC244250.4	1	1	-0.034185
chr22	22734607	22735096	22734851	ENSG00000211664.2	+	IG_V_gene	KNOWN	IGLV2-18	1	2	-0.034185
chr22	22738944	22739187	22739065	ENSG00000253152.1	+	IG_V_pseudogene	KNOWN	IGLV3-17	1	1	-0.034185
chr22	22747383	22747911	22747647	ENSG00000211665.2	+	IG_V_gene	KNOWN	IGLV3-16	1	2	-0.034185
chr22	22755554	22755797	22755675	ENSG00000253786.1	+	IG_V_pseudogene	KNOWN	IGLV3-15	1	1	0.063703
chr22	22758696	22758790	22758743	ENSG00000207835.1	+	miRNA	NOVEL	AC244250.3	1	1	0.063703
chr22	22758700	22759218	22758959	ENSG00000211666.2	+	IG_V_gene	KNOWN	IGLV2-14	1	2	0.063703
chr22	22762294	22762516	22762405	ENSG00000253590.1	+	IG_V_pseudogene	KNOWN	IGLV3-13	1	1	0.063703
chr22	22771824	22772586	22772205	ENSG00000211667.2	+	IG_V_gene	KNOWN	IGLV3-12	1	2	0.033777
chr22	22774529	22774691	22774610	ENSG00000231392.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-24A12.8	1	1	0.033777
chr22	22785643	22787268	22786455	ENSG00000275772.1	-	processed_pseudogene	KNOWN	LL22NC03-24A12.9	1	2	0.033777
chr22	22792488	22792582	22792535	ENSG00000207833.1	+	miRNA	NOVEL	AC244157.1	1	1	-0.034272
chr22	22792491	22793007	22792749	ENSG00000211668.2	+	IG_V_gene	KNOWN	IGLV2-11	1	2	-0.034272
chr22	22803076	22803360	22803218	ENSG00000274381.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-84E4.13	1	1	-0.034272
chr22	22811747	22812285	22812016	ENSG00000211669.2	+	IG_V_gene	KNOWN	IGLV3-10	1	2	-0.086007
chr22	22814671	22814926	22814798	ENSG00000226477.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-84E4.11	1	1	-0.086007
chr22	22819010	22819756	22819383	ENSG00000211670.2	+	IG_V_gene	KNOWN	IGLV3-9	1	2	-0.086007
chr22	22822658	22823293	22822975	ENSG00000278196.1	+	IG_V_gene	KNOWN	IGLV2-8	1	2	-0.086007
chr22	22822776	22822871	22822823	ENSG00000207836.1	+	miRNA	KNOWN	MIR650	1	1	-0.086007
chr22	22834865	22835117	22834991	ENSG00000237127.1	+	unprocessed_pseudogene	KNOWN	LL22NC03-84E4.8	1	1	0.020042
chr22	22838602	22838872	22838737	ENSG00000254077.1	+	IG_V_pseudogene	KNOWN	IGLV3-7	1	1	0.020042
chr22	22850375	22850624	22850499	ENSG00000253448.1	+	IG_V_pseudogene	KNOWN	IGLV3-6	1	1	0.202045
chr22	22856545	22856638	22856591	ENSG00000207832.1	+	miRNA	NOVEL	AC245028.1	1	1	0.202045
chr22	22856762	22857038	22856900	ENSG00000253234.1	+	IG_V_pseudogene	KNOWN	IGLV2-5	1	1	0.202045
chr22	22858025	22858268	22858146	ENSG00000226420.1	+	IG_V_pseudogene	KNOWN	IGLV3-4	1	1	0.202045
chr22	22871507	22872035	22871771	ENSG00000211672.2	+	IG_V_gene	KNOWN	IGLV4-3	1	2	0.021219
chr22	22873212	22873440	22873326	ENSG00000253963.1	+	IG_V_pseudogene	KNOWN	IGLV3-2	1	1	0.021219
chr22	22880706	22881396	22881051	ENSG00000211673.2	+	IG_V_gene	KNOWN	IGLV3-1	1	2	0.021219
chr22	22886267	22886379	22886323	ENSG00000264824.1	+	miRNA	KNOWN	MIR5571	1	1	0.021219
chr22	22887780	22896107	22891943	ENSG00000254709.7	+	protein_coding	KNOWN	IGLL5	3	3	0.196510
chr22	22893692	22893818	22893755	ENSG00000211674.2	+	IG_J_gene	KNOWN	IGLJ1	1	1	0.260192
chr22	22895375	22895834	22895604	ENSG00000211675.2	+	IG_C_gene	KNOWN	IGLC1	1	1	0.260192
chr22	22899481	22899655	22899568	ENSG00000211676.2	+	IG_J_gene	KNOWN	IGLJ2	1	1	0.260192
chr22	22900976	22901437	22901206	ENSG00000211677.2	+	IG_C_gene	KNOWN	IGLC2	1	1	0.260192
chr22	22904850	22905025	22904937	ENSG00000211678.2	+	IG_J_gene	KNOWN	IGLJ3	1	1	0.260192
chr22	22906342	22906803	22906572	ENSG00000211679.2	+	IG_C_gene	KNOWN	IGLC3	1	1	0.260192
chr22	22910574	22910606	22910590	ENSG00000211680.2	+	IG_J_gene	KNOWN	IGLJ4	1	1	0.279077
chr22	22910828	22911075	22910951	ENSG00000254029.1	+	IG_C_pseudogene	KNOWN	IGLC4	1	1	0.279077
chr22	22914237	22914308	22914272	ENSG00000211681.2	+	IG_J_gene	KNOWN	IGLJ5	1	1	0.279077
chr22	22915635	22915927	22915781	ENSG00000254030.1	+	IG_C_pseudogene	KNOWN	IGLC5	1	1	0.279077
chr22	22918132	22918201	22918166	ENSG00000211682.2	+	IG_J_gene	KNOWN	IGLJ6	1	1	0.279077
chr22	22919535	22919851	22919693	ENSG00000222037.5	+	IG_C_pseudogene	KNOWN	IGLC6	1	1	0.279077
chr22	22921390	22921435	22921412	ENSG00000211684.2	+	IG_J_gene	KNOWN	IGLJ7	1	1	0.279077
chr22	22922594	22923034	22922814	ENSG00000211685.3	+	IG_C_gene	KNOWN	IGLC7	1	1	0.279077
chr22	22988263	22988581	22988422	ENSG00000237472.1	+	processed_pseudogene	KNOWN	AP000361.2	1	1	-0.256736
chr22	22990690	23008356	22999523	ENSG00000223679.1	+	unprocessed_pseudogene	KNOWN	AP000362.1	1	3	-0.385167
chr22	23059415	23145021	23102218	ENSG00000100218.11	-	protein_coding	KNOWN	RSPH14	5	7	0.500626
chr22	23070361	23125037	23097699	ENSG00000128266.8	+	protein_coding	KNOWN	GNAZ	3	3	0.607941
chr22	23136620	23136710	23136665	ENSG00000221069.1	+	miRNA	NOVEL	AC000029.1	1	1	0.381498
chr22	23137805	23137864	23137834	ENSG00000275635.1	-	snRNA	NOVEL	U7	1	1	0.381498
chr22	23145326	23164350	23154838	ENSG00000100228.12	+	protein_coding	KNOWN	RAB36	3	11	0.502211
chr22	23179704	23318037	23248870	ENSG00000186716.19	+	protein_coding	KNOWN	BCR	16	23	0.566019
chr22	23179918	23180172	23180045	ENSG00000236794.5	-	processed_pseudogene	KNOWN	BCRP8	1	1	0.242483
chr22	23261782	23262071	23261926	ENSG00000240160.3	-	misc_RNA	KNOWN	RN7SL263P	1	1	0.801134
chr22	23262767	23265005	23263886	ENSG00000230701.2	+	processed_pseudogene	KNOWN	FBXW4P1	1	1	0.801134
chr22	23322543	23322927	23322735	ENSG00000214526.3	-	processed_pseudogene	KNOWN	AP000343.1	1	1	0.461448
chr22	23326616	23328493	23327554	ENSG00000236611.1	+	lincRNA	KNOWN	AP000343.2	1	2	0.461448
chr22	23359603	23387731	23373667	ENSG00000215478.8	-	transcribed_unprocessed_pseudogene	KNOWN	CES5AP1	5	7	0.107180
chr22	23390606	23402726	23396666	ENSG00000133519.12	-	transcribed_unprocessed_pseudogene	KNOWN	ZDHHC8P1	5	6	0.844554
chr22	23392771	23393839	23393305	ENSG00000248409.1	+	unprocessed_pseudogene	KNOWN	KB-1269D1.8	1	5	0.844554
chr22	23433564	23435071	23434317	ENSG00000234928.1	+	lincRNA	KNOWN	AP000344.3	2	3	0.162039
chr22	23446598	23460833	23453715	ENSG00000227755.1	+	transcribed_processed_pseudogene	KNOWN	AP000344.4	3	2	0.377874
chr22	23462086	23486980	23474533	ENSG00000178248.11	-	lincRNA	KNOWN	AP000345.1	1	12	0.152043
chr22	23512494	23513602	23513048	ENSG00000225413.2	-	lincRNA	KNOWN	AP000345.4	1	2	0.636797
chr22	23536881	23547797	23542339	ENSG00000280623.1	+	lincRNA	KNOWN	PCAT14	3	4	0.578731
chr22	23567064	23573507	23570285	ENSG00000224277.5	+	antisense	KNOWN	AP000345.2	2	5	0.474630
chr22	23573125	23580308	23576716	ENSG00000128322.6	-	protein_coding	KNOWN	IGLL1	3	3	0.620371
chr22	23580880	23583859	23582369	ENSG00000272733.1	-	lincRNA	KNOWN	KB-208E9.1	1	3	0.620371
chr22	23607041	23608407	23607724	ENSG00000278655.1	+	unprocessed_pseudogene	KNOWN	KB-1572G7.5	1	2	0.521805
chr22	23608452	23632321	23620386	ENSG00000189269.12	-	protein_coding	KNOWN	DRICH1	2	12	0.381124
chr22	23610329	23610538	23610433	ENSG00000275609.1	+	processed_pseudogene	KNOWN	KB-1572G7.4	1	1	0.380180
chr22	23630618	23638941	23634779	ENSG00000211683.3	-	processed_transcript	KNOWN	KB-1572G7.3	1	6	0.295525
chr22	23638487	23717356	23677921	ENSG00000228315.11	-	processed_transcript	KNOWN	GUSBP11	6	12	0.530437
chr22	23638492	23640762	23639627	ENSG00000234353.2	-	transcribed_unprocessed_pseudogene	KNOWN	AP000347.4	2	2	0.295525
chr22	23649213	23653334	23651273	ENSG00000244723.3	-	unprocessed_pseudogene	KNOWN	ASLP1	1	6	0.317292
chr22	23652860	23717347	23685103	ENSG00000273000.5	-	processed_transcript	KNOWN	KB-1572G7.2	3	12	0.581593
chr22	23658094	23717356	23687725	ENSG00000272578.5	-	transcribed_unprocessed_pseudogene	KNOWN	AP000347.2	9	5	0.604485
chr22	23688136	23699176	23693656	ENSG00000159496.14	+	protein_coding	KNOWN	RGL4	10	14	0.560184
chr22	23738678	23751092	23744885	ENSG00000187792.4	-	protein_coding	KNOWN	ZNF70	1	2	0.455889
chr22	23752743	23754468	23753605	ENSG00000128218.7	-	protein_coding	KNOWN	VPREB3	2	2	0.794498
chr22	23763021	23765861	23764441	ENSG00000169314.14	+	protein_coding	KNOWN	C22orf15	5	6	0.794498
chr22	23765834	23768443	23767138	ENSG00000250479.8	-	protein_coding	KNOWN	CHCHD10	5	4	0.794498
chr22	23768226	23784316	23776271	ENSG00000099953.9	+	protein_coding	KNOWN	MMP11	13	8	0.931761
chr22	23782283	23783958	23783120	ENSG00000280178.1	-	protein_coding	KNOWN	AP000349.2	1	3	0.948759
chr22	23786963	23834516	23810739	ENSG00000099956.18	+	protein_coding	KNOWN	SMARCB1	9	9	0.681096
chr22	23834503	23839128	23836815	ENSG00000099958.14	-	protein_coding	KNOWN	DERL3	10	7	0.952134
chr22	23856427	23857039	23856733	ENSG00000272973.1	-	antisense	KNOWN	KB-1125A3.11	1	1	0.730592
chr22	23856703	23886309	23871506	ENSG00000133460.19	+	protein_coding	KNOWN	SLC2A11	23	13	0.784781
chr22	23862188	23895223	23878705	ENSG00000251357.4	+	protein_coding	KNOWN	AP000350.10	1	6	0.766433
chr22	23865248	23873277	23869262	ENSG00000279467.1	-	antisense	KNOWN	KB-1125A3.12	1	1	0.770751
chr22	23879493	23879790	23879641	ENSG00000244425.3	-	misc_RNA	KNOWN	RN7SL268P	1	1	0.828957
chr22	23894004	23895227	23894615	ENSG00000240972.1	+	protein_coding	KNOWN	MIF	3	3	0.580652
chr22	23894426	23898930	23896678	ENSG00000218537.1	-	antisense	KNOWN	MIF-AS1	1	3	0.580652
chr22	23901432	23907068	23904250	ENSG00000273295.1	-	lincRNA	KNOWN	AP000350.5	1	1	0.580652
chr22	23903381	23903455	23903418	ENSG00000277002.1	+	miRNA	NOVEL	AP000350.1	1	1	0.580652
chr22	23926900	23929574	23928237	ENSG00000225282.1	+	processed_pseudogene	KNOWN	AP000350.6	1	3	0.659032
chr22	23939998	23942798	23941398	ENSG00000206090.4	+	unprocessed_pseudogene	KNOWN	AP000350.7	1	3	0.535598
chr22	23949918	23954042	23951980	ENSG00000231271.1	+	unprocessed_pseudogene	KNOWN	AP000350.8	1	3	0.690529
chr22	23957414	23961186	23959300	ENSG00000133433.10	-	protein_coding	KNOWN	GSTT2B	2	5	0.693633
chr22	23963780	23964374	23964077	ENSG00000228039.3	+	processed_pseudogene	KNOWN	KB-1125A3.10	1	2	0.693633
chr22	23966901	23972532	23969716	ENSG00000099974.7	+	protein_coding	KNOWN	DDTL	1	3	0.870783
chr22	23969211	23969873	23969542	ENSG00000272787.1	+	lincRNA	KNOWN	KB-226F1.2	1	1	0.693633
chr22	23971365	23980469	23975917	ENSG00000099977.13	-	protein_coding	KNOWN	DDT	7	5	1.087448
chr22	23976904	23977585	23977244	ENSG00000250470.1	-	unprocessed_pseudogene	KNOWN	AP000351.3	1	2	1.087448
chr22	23980058	23983915	23981986	ENSG00000099984.11	+	polymorphic_pseudogene	KNOWN	GSTT2	3	6	1.087448
chr22	23987320	23991421	23989370	ENSG00000224205.1	-	unprocessed_pseudogene	KNOWN	AP000351.4	1	3	0.856823
chr22	23998401	24005453	24001927	ENSG00000276950.4	-	transcribed_unprocessed_pseudogene	KNOWN	GSTTP1	6	5	0.422332
chr22	24006305	24008258	24007281	ENSG00000235689.1	-	unprocessed_pseudogene	KNOWN	AP000351.13	1	3	0.422332
chr22	24011192	24178628	24094910	ENSG00000099991.16	+	protein_coding	KNOWN	CABIN1	15	37	0.696238
chr22	24101689	24103354	24102521	ENSG00000232545.1	+	sense_intronic	KNOWN	KB-318B8.7	1	3	0.882538
chr22	24181259	24189110	24185184	ENSG00000099994.10	+	protein_coding	KNOWN	SUSD2	2	15	1.249533
chr22	24219654	24245142	24232398	ENSG00000099998.17	-	protein_coding	KNOWN	GGT5	6	12	0.693376
chr22	24248074	24249466	24248770	ENSG00000230712.2	-	unprocessed_pseudogene	KNOWN	GGTLC4P	1	5	0.906436
chr22	24251828	24265525	24258676	ENSG00000128262.8	+	transcribed_unprocessed_pseudogene	KNOWN	POM121L9P	3	7	0.621413
chr22	24259929	24263764	24261846	ENSG00000225098.1	-	unprocessed_pseudogene	KNOWN	BCRP1	1	5	0.621413
chr22	24269346	24270134	24269740	ENSG00000215464.4	-	processed_pseudogene	KNOWN	AP000354.2	1	2	0.622977
chr22	24270817	24417740	24344278	ENSG00000100014.19	+	protein_coding	KNOWN	SPECC1L	7	17	0.336084
chr22	24270898	24442356	24356627	ENSG00000258555.5	+	protein_coding	KNOWN	SPECC1L-ADORA2A	4	20	0.425124
chr22	24417879	24442360	24430119	ENSG00000128271.20	+	protein_coding	KNOWN	ADORA2A	12	4	0.957954
chr22	24429206	24495074	24462140	ENSG00000178803.10	-	antisense	KNOWN	ADORA2A-AS1	3	8	0.554598
chr22	24494107	24528390	24511248	ENSG00000100024.14	+	protein_coding	KNOWN	UPB1	5	10	0.353189
chr22	24516508	24518386	24517447	ENSG00000228923.1	+	antisense	KNOWN	AP000355.2	1	2	0.464325
chr22	24540423	24555935	24548179	ENSG00000138867.16	-	protein_coding	KNOWN	GUCD1	13	7	0.662981
chr22	24555503	24609980	24582741	ENSG00000100028.11	+	protein_coding	KNOWN	SNRPD3	5	7	0.624729
chr22	24583750	24629005	24606377	ENSG00000100031.18	+	protein_coding	KNOWN	GGT1	27	17	0.458758
chr22	24585620	24593208	24589414	ENSG00000178026.12	-	protein_coding	KNOWN	LRRC75B	8	5	0.529577
chr22	24598054	24599398	24598726	ENSG00000230947.2	+	sense_intronic	KNOWN	AP000356.2	1	2	0.464293
chr22	24632915	24653356	24643135	ENSG00000215481.8	+	transcribed_unprocessed_pseudogene	KNOWN	BCRP3	5	7	0.625564
chr22	24657481	24658765	24658123	ENSG00000224124.3	-	processed_pseudogene	KNOWN	POM121L10P	1	1	0.446070
chr22	24686168	24686679	24686423	ENSG00000224806.2	+	processed_pseudogene	KNOWN	ARL5AP4	1	1	0.048923
chr22	24686923	24688087	24687505	ENSG00000224334.1	+	processed_pseudogene	KNOWN	AP000357.4	1	1	0.048923
chr22	24691122	24696003	24693562	ENSG00000282012.1	-	lincRNA	KNOWN	LL22NC03-N95F10.1	1	2	-0.157787
chr22	24703348	24703503	24703425	ENSG00000237601.1	+	processed_pseudogene	KNOWN	AP000358.5	1	1	-0.157787
chr22	24712292	24712520	24712406	ENSG00000182351.7	+	processed_pseudogene	KNOWN	CRIP1P4	1	1	0.248961
chr22	24719034	24774720	24746877	ENSG00000184571.13	-	protein_coding	KNOWN	PIWIL3	5	22	0.020559
chr22	24806169	24927578	24866873	ENSG00000167037.18	+	protein_coding	KNOWN	SGSM1	6	26	0.041959
chr22	24901147	24901214	24901180	ENSG00000199783.1	-	snoRNA	NOVEL	SNORD56	1	1	-0.147079
chr22	24935110	24946695	24940902	ENSG00000206069.5	-	protein_coding	KNOWN	TMEM211	2	4	0.208910
chr22	24952730	25197448	25075089	ENSG00000197077.12	+	protein_coding	KNOWN	KIAA1671	5	14	0.237861
chr22	25009685	25015072	25012378	ENSG00000279085.1	-	antisense	KNOWN	CTA-243E7.4	1	1	0.174749
chr22	25022594	25024652	25023623	ENSG00000279548.1	-	antisense	KNOWN	CTA-243E7.3	1	1	0.169994
chr22	25048967	25051966	25050466	ENSG00000279006.1	-	antisense	KNOWN	CTA-243E7.2	1	1	0.228645
chr22	25052122	25065241	25058681	ENSG00000279110.1	-	antisense	KNOWN	CTA-243E7.1	1	1	0.256623
chr22	25102433	25112692	25107562	ENSG00000203280.4	-	antisense	KNOWN	CTA-221G9.12	1	5	0.187577
chr22	25179309	25179554	25179431	ENSG00000271181.1	-	processed_pseudogene	KNOWN	CTA-221G9.10	1	1	0.154728
chr22	25199850	25207363	25203606	ENSG00000100053.9	+	protein_coding	KNOWN	CRYBB3	2	6	0.117083
chr22	25212742	25213685	25213213	ENSG00000236641.1	+	lincRNA	KNOWN	CTA-221G9.7	1	2	0.208715
chr22	25219522	25231869	25225695	ENSG00000244752.2	+	protein_coding	KNOWN	CRYBB2	1	6	0.216277
chr22	25227787	25227852	25227819	ENSG00000278125.1	+	miRNA	NOVEL	Z99916.1	1	1	0.208715
chr22	25251523	25252602	25252062	ENSG00000279298.1	-	lincRNA	KNOWN	CTA-221G9.11	1	1	-0.424584
chr22	25279529	25282674	25281101	ENSG00000233577.6	-	lincRNA	KNOWN	RP3-462D8.2	2	3	-0.083375
chr22	25318256	25320080	25319168	ENSG00000206066.3	+	unprocessed_pseudogene	KNOWN	IGLL3P	1	2	-0.112022
chr22	25327252	25339975	25333613	ENSG00000230637.2	+	unprocessed_pseudogene	KNOWN	CTA-246H3.8	1	4	-0.002063
chr22	25349543	25350322	25349932	ENSG00000231466.2	-	processed_pseudogene	KNOWN	CTA-246H3.11	1	1	0.196431
chr22	25351418	25405377	25378397	ENSG00000100068.11	-	protein_coding	KNOWN	LRP5L	8	7	0.561928
chr22	25434324	25435070	25434697	ENSG00000272942.1	-	lincRNA	KNOWN	CTA-246H3.12	1	1	0.108671
chr22	25436312	25436915	25436613	ENSG00000272798.1	+	lincRNA	KNOWN	CTA-390C10.9	1	1	0.108671
chr22	25437306	25437823	25437564	ENSG00000271138.1	-	IG_V_pseudogene	KNOWN	IGLVIVOR22-1	1	2	0.108671
chr22	25448105	25520854	25484479	ENSG00000100058.12	+	transcribed_unprocessed_pseudogene	KNOWN	CRYBB2P1	6	6	0.011017
chr22	25455646	25455711	25455678	ENSG00000277872.1	+	miRNA	KNOWN	MIR6817	1	1	0.053722
chr22	25476218	25479971	25478094	ENSG00000272977.1	+	sense_intronic	KNOWN	CTA-390C10.10	1	1	0.112170
chr22	25532720	25532809	25532764	ENSG00000265978.1	-	miRNA	NOVEL	AL008721.1	1	1	-0.380313
chr22	25561117	25564462	25562789	ENSG00000234884.1	-	antisense	KNOWN	CTA-407F11.8	3	3	-0.060011
chr22	25564849	25729294	25647071	ENSG00000100077.14	+	protein_coding	KNOWN	ADRBK2	3	23	-0.219077
chr22	25580241	25581382	25580811	ENSG00000237387.1	-	antisense	KNOWN	CTA-407F11.7	1	2	-0.437688
chr22	25647261	25649232	25648246	ENSG00000224003.1	+	processed_pseudogene	KNOWN	YES1P1	1	2	-0.193917
chr22	25715041	25715169	25715105	ENSG00000222585.1	-	rRNA	KNOWN	RNA5SP494	1	1	-0.336245
chr22	25742144	26031041	25886592	ENSG00000133454.15	+	protein_coding	KNOWN	MYO18B	10	44	0.021304
chr22	25756318	25756669	25756493	ENSG00000278960.1	-	antisense	KNOWN	CTA-407F11.9	1	1	0.460143
chr22	25876854	25903247	25890050	ENSG00000231933.7	-	antisense	KNOWN	CTA-125H2.2	28	6	-0.188876
chr22	25883074	25883161	25883117	ENSG00000264925.1	-	miRNA	NOVEL	Z98949.1	1	1	-0.285078
chr22	25959074	25983526	25971300	ENSG00000232464.1	-	antisense	KNOWN	CTA-125H2.1	1	2	-0.079190
chr22	25963983	25964273	25964128	ENSG00000223056.1	-	misc_RNA	KNOWN	RN7SKP169	1	1	0.189967
chr22	26006389	26006532	26006460	ENSG00000232050.1	-	processed_pseudogene	KNOWN	CTA-125H2.3	1	1	-0.134436
chr22	26161834	26164303	26163068	ENSG00000236464.1	+	lincRNA	KNOWN	CTA-796E4.3	1	2	-0.295612
chr22	26161910	26163214	26162562	ENSG00000229770.1	-	antisense	KNOWN	CTA-796E4.4	1	3	-0.295612
chr22	26169474	26383597	26276535	ENSG00000100095.18	+	protein_coding	KNOWN	SEZ6L	10	17	-0.024960
chr22	26241331	26254092	26247711	ENSG00000224192.2	-	antisense	KNOWN	RP11-259P1.1	1	5	-0.017488
chr22	26390667	26390776	26390721	ENSG00000252267.1	-	rRNA	KNOWN	RNA5SP495	1	1	0.055832
chr22	26422071	26423193	26422632	ENSG00000230203.1	-	processed_pseudogene	KNOWN	CTB-1048E9.7	1	2	0.084458
chr22	26429273	26445015	26437144	ENSG00000128203.6	+	protein_coding	KNOWN	ASPHD2	1	4	0.612082
chr22	26443423	26483837	26463630	ENSG00000100099.20	-	protein_coding	KNOWN	HPS4	18	14	0.432453
chr22	26483877	26494658	26489267	ENSG00000100104.12	+	protein_coding	KNOWN	SRRD	4	10	0.434404
chr22	26491225	26512505	26501865	ENSG00000100109.16	-	protein_coding	KNOWN	TFIP11	17	16	0.295400
chr22	26512537	26514568	26513552	ENSG00000261188.1	+	antisense	KNOWN	CTA-445C9.14	2	2	0.311210
chr22	26521983	26596717	26559350	ENSG00000128294.15	-	protein_coding	KNOWN	TPST2	9	8	0.439929
chr22	26555212	26555323	26555267	ENSG00000221760.1	-	miRNA	KNOWN	MIR548J	1	1	0.521065
chr22	26560526	26561088	26560807	ENSG00000213707.2	+	processed_pseudogene	KNOWN	HMGB1P10	1	1	0.521065
chr22	26599278	26618088	26608683	ENSG00000100122.5	-	protein_coding	KNOWN	CRYBB1	1	6	0.682427
chr22	26621964	26630672	26626318	ENSG00000196431.3	+	protein_coding	KNOWN	CRYBA4	2	6	0.567510
chr22	26644889	26645336	26645112	ENSG00000226912.1	-	processed_pseudogene	KNOWN	ISCA2P1	1	1	0.374800
chr22	26646428	26676475	26661451	ENSG00000225783.6	+	lincRNA	KNOWN	MIAT	21	5	0.454646
chr22	26657521	26657655	26657588	ENSG00000278404.1	+	misc_RNA	NOVEL	MIAT_exon1	1	1	0.493242
chr22	26667693	26672654	26670173	ENSG00000206028.1	-	lincRNA	KNOWN	CTA-373H7.7	1	3	0.432359
chr22	26671402	26671550	26671476	ENSG00000277941.1	+	misc_RNA	NOVEL	MIAT_exon5_1	1	1	0.379479
chr22	26672164	26672248	26672206	ENSG00000275942.1	+	misc_RNA	NOVEL	MIAT_exon5_2	1	1	0.379479
chr22	26672767	26780207	26726487	ENSG00000244625.5	+	lincRNA	KNOWN	MIATNB	9	6	0.367702
chr22	26673254	26673630	26673442	ENSG00000276991.1	+	misc_RNA	NOVEL	MIAT_exon5_3	1	1	0.379479
chr22	26858634	26865786	26862210	ENSG00000223704.1	+	lincRNA	KNOWN	LINC01422	1	3	0.298443
chr22	26886909	26887548	26887228	ENSG00000231369.1	-	processed_pseudogene	KNOWN	RP1-40G4P.1	1	2	0.073255
chr22	26903292	26920611	26911951	ENSG00000235271.5	+	lincRNA	KNOWN	LINC01422	2	3	0.251200
chr22	27019369	27024550	27021959	ENSG00000279440.1	+	lincRNA	KNOWN	CTA-992D9.11	1	1	0.193530
chr22	27035887	27035991	27035939	ENSG00000200443.1	+	snRNA	KNOWN	RNU6-1066P	1	1	0.053924
chr22	27040197	27041494	27040845	ENSG00000279914.1	+	lincRNA	KNOWN	CTA-992D9.10	1	1	0.053924
chr22	27044001	27045315	27044658	ENSG00000279848.1	+	lincRNA	KNOWN	CTA-992D9.9	1	1	0.053924
chr22	27048144	27060518	27054331	ENSG00000236858.1	-	lincRNA	KNOWN	CTA-992D9.6	1	2	0.086285
chr22	27102766	27107019	27104892	ENSG00000280025.1	+	lincRNA	KNOWN	CTA-992D9.8	1	1	0.505130
chr22	27143478	27159878	27151678	ENSG00000231405.1	+	lincRNA	KNOWN	CTA-992D9.7	1	2	0.134480
chr22	27204211	27205126	27204668	ENSG00000238195.1	+	lincRNA	KNOWN	CTA-503F6.2	1	2	0.442807
chr22	27221349	27224727	27223038	ENSG00000233521.5	-	lincRNA	KNOWN	RP5-1172A22.1	2	3	0.355026
chr22	27276240	27286349	27281294	ENSG00000233574.1	+	lincRNA	KNOWN	CTA-929C8.5	1	3	0.384173
chr22	27307483	27318538	27313010	ENSG00000223726.1	-	lincRNA	KNOWN	CTA-929C8.7	1	3	0.545529
chr22	27310651	27317456	27314053	ENSG00000226741.1	+	lincRNA	KNOWN	CTA-929C8.6	1	2	0.568178
chr22	27331787	27379265	27355526	ENSG00000230051.1	+	lincRNA	KNOWN	CTA-929C8.8	1	4	-0.129544
chr22	27414462	27419713	27417087	ENSG00000280445.1	-	lincRNA	KNOWN	RP1-205F14P.1	2	2	0.482367
chr22	27457247	27460060	27458653	ENSG00000227880.1	-	lincRNA	KNOWN	RP11-46E17.6	1	2	0.508947
chr22	27563839	27573573	27568706	ENSG00000224027.1	-	lincRNA	KNOWN	RP1-231P7P.1	1	3	0.409125
chr22	27676559	27714970	27695764	ENSG00000227838.1	-	lincRNA	KNOWN	RP1-213J1P__B.1	1	5	0.433193
chr22	27707580	27709931	27708755	ENSG00000231495.1	+	lincRNA	KNOWN	RP1-213J1P__B.2	1	2	0.534350
chr22	27716480	27721677	27719078	ENSG00000226169.1	+	antisense	KNOWN	RP11-375H17.1	1	2	0.430161
chr22	27748277	27801498	27774887	ENSG00000169184.5	-	protein_coding	KNOWN	MN1	3	3	0.513954
chr22	27851669	27920134	27885901	ENSG00000180957.17	-	protein_coding	KNOWN	PITPNB	11	12	0.180757
chr22	27919376	28008581	27963978	ENSG00000235954.6	+	processed_transcript	KNOWN	TTC28-AS1	21	5	0.234191
chr22	27919384	27919545	27919464	ENSG00000277460.1	+	misc_RNA	NOVEL	TTC28-AS1_1	1	1	0.043629
chr22	27920525	27920612	27920568	ENSG00000264073.1	-	miRNA	KNOWN	MIR3199-1	1	1	0.043629
chr22	27922022	27922178	27922100	ENSG00000276150.1	+	misc_RNA	NOVEL	TTC28-AS1_2	1	1	0.043629
chr22	27978014	28679865	28328939	ENSG00000100154.14	-	protein_coding	KNOWN	TTC28	8	23	0.152663
chr22	27994474	27994654	27994564	ENSG00000274342.1	+	misc_RNA	NOVEL	TTC28-AS1_3	1	1	0.645927
chr22	28002484	28002595	28002539	ENSG00000276675.1	+	misc_RNA	NOVEL	TTC28-AS1_4	1	1	0.645927
chr22	28056153	28056453	28056303	ENSG00000239249.3	-	misc_RNA	KNOWN	RN7SL757P	1	1	0.415606
chr22	28232756	28232823	28232789	ENSG00000201209.1	-	snoRNA	NOVEL	SNORD42	1	1	-0.031640
chr22	28303754	28303850	28303802	ENSG00000199797.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.139334
chr22	28459869	28459948	28459908	ENSG00000276162.1	+	miRNA	KNOWN	MIR5739	1	1	0.284637
chr22	28642979	28643270	28643124	ENSG00000266503.2	-	misc_RNA	KNOWN	RN7SL162P	1	1	0.023686
chr22	28687743	28742422	28715082	ENSG00000183765.20	-	protein_coding	KNOWN	CHEK2	24	16	0.387949
chr22	28742031	28757515	28749773	ENSG00000100209.9	+	protein_coding	KNOWN	HSCB	7	6	0.462685
chr22	28772674	28789301	28780987	ENSG00000159873.9	+	protein_coding	KNOWN	CCDC117	6	5	0.751652
chr22	28794555	28800597	28797576	ENSG00000100219.16	-	protein_coding	KNOWN	XBP1	7	6	0.455499
chr22	28798628	28798725	28798676	ENSG00000280977.1	-	miRNA	NOVEL	Z93930.1	1	1	0.455499
chr22	28800683	28848559	28824621	ENSG00000226471.6	+	antisense	KNOWN	CTA-292E10.6	5	4	0.281899
chr22	28814914	28815662	28815288	ENSG00000272858.1	+	sense_intronic	KNOWN	CTA-292E10.8	1	1	0.258184
chr22	28835893	28836137	28836015	ENSG00000224256.1	-	processed_pseudogene	KNOWN	CTA-292E10.7	1	1	0.220316
chr22	28883592	29057487	28970539	ENSG00000183579.15	+	protein_coding	KNOWN	ZNRF3	3	9	0.353442
chr22	28992721	29018620	29005670	ENSG00000235786.1	+	sense_intronic	KNOWN	ZNRF3-IT1	1	2	0.421247
chr22	29024999	29031476	29028237	ENSG00000177993.3	-	antisense	KNOWN	ZNRF3-AS1	1	3	0.303697
chr22	29058672	29061844	29060258	ENSG00000100249.4	-	protein_coding	KNOWN	C22orf31	1	3	0.528432
chr22	29073078	29168333	29120705	ENSG00000183762.12	+	protein_coding	KNOWN	KREMEN1	6	10	0.447232
chr22	29099041	29111683	29105362	ENSG00000226772.1	-	antisense	KNOWN	CTA-747E2.10	1	2	0.520597
chr22	29126261	29126404	29126332	ENSG00000281592.1	-	miRNA	NOVEL	Z95116.1	1	1	0.091992
chr22	29134014	29134120	29134067	ENSG00000200871.1	+	snRNA	KNOWN	RNU6-810P	1	1	0.420741
chr22	29191697	29191808	29191752	ENSG00000251952.1	-	snRNA	KNOWN	RNU6-1219P	1	1	0.649604
chr22	29205851	29259597	29232724	ENSG00000186998.15	+	protein_coding	KNOWN	EMID1	11	15	0.711378
chr22	29259852	29268209	29264030	ENSG00000100263.13	-	protein_coding	KNOWN	RHBDD3	7	7	0.848721
chr22	29260889	29262037	29261463	ENSG00000237015.1	+	antisense	KNOWN	CTA-984G1.5	1	2	0.848721
chr22	29268009	29300525	29284267	ENSG00000182944.17	+	protein_coding	KNOWN	EWSR1	22	18	0.690788
chr22	29306582	29312785	29309683	ENSG00000185340.15	+	protein_coding	KNOWN	GAS2L1	10	6	1.081805
chr22	29312933	29319679	29316306	ENSG00000100276.9	-	protein_coding	KNOWN	RASL10A	4	3	1.305587
chr22	29316744	29317220	29316982	ENSG00000273216.1	-	sense_intronic	KNOWN	AC002059.10	1	1	1.305587
chr22	29327680	29423179	29375429	ENSG00000100280.16	-	protein_coding	KNOWN	AP1B1	11	23	0.691597
chr22	29333158	29333267	29333212	ENSG00000280968.1	-	miRNA	KNOWN	MIR3653	1	1	0.980163
chr22	29333163	29333258	29333210	ENSG00000239127.1	-	snoRNA	KNOWN	SNORD125	1	1	0.980163
chr22	29419155	29423193	29421174	ENSG00000242156.1	-	unprocessed_pseudogene	KNOWN	AC000041.8	1	2	0.532120
chr22	29432944	29435005	29433974	ENSG00000278292.1	+	unprocessed_pseudogene	KNOWN	RFPL4AP6	1	3	0.426411
chr22	29436534	29478175	29457354	ENSG00000225465.8	-	antisense	KNOWN	RFPL1S	3	4	0.542291
chr22	29437583	29437733	29437658	ENSG00000274457.1	+	unprocessed_pseudogene	KNOWN	AC000041.10	1	1	0.426411
chr22	29438583	29442455	29440519	ENSG00000128250.5	+	protein_coding	KNOWN	RFPL1	1	2	0.426411
chr22	29480220	29481113	29480666	ENSG00000282816.1	-	antisense	KNOWN	AC000035.3	1	2	0.783870
chr22	29480230	29491390	29485810	ENSG00000100285.9	+	protein_coding	KNOWN	NEFH	1	4	0.796345
chr22	29505879	29555216	29530547	ENSG00000100296.13	-	protein_coding	KNOWN	THOC5	17	23	0.657582
chr22	29513889	29535390	29524639	ENSG00000234208.1	-	sense_intronic	KNOWN	CTA-256D12.11	1	2	0.638102
chr22	29554808	29581337	29568072	ENSG00000184117.11	-	protein_coding	KNOWN	NIPSNAP1	6	10	0.727302
chr22	29603556	29698598	29651077	ENSG00000186575.17	+	protein_coding	KNOWN	NF2	11	17	0.688527
chr22	29608900	29609501	29609200	ENSG00000233010.1	+	processed_pseudogene	KNOWN	RPEP4	1	1	0.634643
chr22	29705256	29719859	29712557	ENSG00000232396.2	-	antisense	KNOWN	RP1-76B20.11	2	3	0.882350
chr22	29711820	29719714	29715767	ENSG00000239446.1	-	antisense	KNOWN	RP1-76B20.12	1	2	0.911143
chr22	29720084	29731839	29725961	ENSG00000100314.3	+	protein_coding	KNOWN	CABP7	1	5	0.962579
chr22	29730956	29767011	29748983	ENSG00000100319.12	-	protein_coding	KNOWN	ZMAT5	2	6	1.009932
chr22	29758758	29758859	29758808	ENSG00000200976.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.752682
chr22	29767369	29770413	29768891	ENSG00000184076.12	+	protein_coding	KNOWN	UQCR10	3	3	0.743554
chr22	29788608	29838304	29813456	ENSG00000100325.14	-	protein_coding	KNOWN	ASCC2	23	21	0.822089
chr22	29883155	30030866	29957010	ENSG00000100330.15	+	protein_coding	KNOWN	MTMR3	12	20	0.344787
chr22	29883860	29883945	29883902	ENSG00000278841.1	+	miRNA	NOVEL	AC004819.1	1	1	0.398471
chr22	29899587	29899693	29899640	ENSG00000207455.1	-	snRNA	KNOWN	RNU6-331P	1	1	0.373623
chr22	29944206	29944299	29944252	ENSG00000221736.2	+	miRNA	NOVEL	AC003681.1	1	1	0.302671
chr22	29978950	30028236	30003593	ENSG00000279159.1	-	antisense	KNOWN	RP3-394A18.1	1	1	0.447091
chr22	30007049	30007113	30007081	ENSG00000275818.1	+	miRNA	KNOWN	MIR6818	1	1	0.424567
chr22	30008742	30080480	30044611	ENSG00000227117.6	-	antisense	KNOWN	HORMAD2-AS1	3	5	0.547111
chr22	30046276	30047193	30046734	ENSG00000227201.2	-	processed_pseudogene	KNOWN	CNN2P1	1	1	0.563744
chr22	30080174	30177075	30128624	ENSG00000176635.17	+	protein_coding	KNOWN	HORMAD2	4	11	0.190296
chr22	30105094	30105408	30105251	ENSG00000226573.1	-	processed_pseudogene	KNOWN	CTA-85E5.7	1	1	0.160523
chr22	30136673	30137681	30137177	ENSG00000225971.1	-	processed_pseudogene	KNOWN	CTA-85E5.6	1	2	0.203353
chr22	30184644	30207109	30195876	ENSG00000225676.1	-	antisense	KNOWN	RP3-438O4.4	1	3	0.221302
chr22	30239194	30240538	30239866	ENSG00000232530.1	+	antisense	KNOWN	RP1-102K2.6	1	3	0.797763
chr22	30240447	30246851	30243649	ENSG00000128342.4	-	protein_coding	KNOWN	LIF	2	3	0.797763
chr22	30246205	30246998	30246601	ENSG00000268812.3	+	antisense	KNOWN	RP1-102K2.8	1	1	0.797763
chr22	30262829	30266840	30264834	ENSG00000099985.3	-	protein_coding	KNOWN	OSM	3	3	1.126140
chr22	30275215	30276951	30276083	ENSG00000279699.1	-	TEC	KNOWN	RP1-102K2.9	1	1	1.147487
chr22	30285117	30289627	30287372	ENSG00000239282.7	-	protein_coding	KNOWN	GATSL3	14	9	1.147487
chr22	30285238	30299482	30292360	ENSG00000248751.6	-	protein_coding	KNOWN	RP1-130H16.18	5	14	1.154540
chr22	30291990	30327046	30309518	ENSG00000099992.15	-	protein_coding	KNOWN	TBC1D10A	10	10	1.051219
chr22	30331988	30356947	30344467	ENSG00000099995.18	-	protein_coding	KNOWN	SF3A1	10	16	0.705067
chr22	30356635	30378658	30367646	ENSG00000187860.10	+	protein_coding	KNOWN	CCDC157	7	12	0.792382
chr22	30368811	30421771	30395291	ENSG00000099999.14	-	protein_coding	KNOWN	RNF215	10	9	0.876574
chr22	30396857	30425317	30411087	ENSG00000100003.17	+	protein_coding	KNOWN	SEC14L2	17	12	0.891227
chr22	30409255	30428990	30419122	ENSG00000249590.7	+	protein_coding	KNOWN	RP4-539M6.19	3	9	0.852023
chr22	30411646	30411755	30411700	ENSG00000275258.1	+	miRNA	NOVEL	AC004832.1	1	1	0.848538
chr22	30420512	30420912	30420712	ENSG00000273350.1	+	sense_intronic	KNOWN	RP4-539M6.20	1	1	0.848538
chr22	30421045	30421148	30421096	ENSG00000222915.1	+	snRNA	KNOWN	RNU6-564P	1	1	0.848538
chr22	30421206	30421536	30421371	ENSG00000272689.1	-	sense_intronic	KNOWN	RP4-539M6.21	1	1	0.848538
chr22	30425530	30429053	30427291	ENSG00000242114.5	+	protein_coding	KNOWN	MTFP1	6	4	0.848538
chr22	30435544	30436247	30435895	ENSG00000273428.3	+	lincRNA	KNOWN	RP4-539M6.22	2	2	0.885869
chr22	30439837	30440318	30440077	ENSG00000230137.1	+	processed_pseudogene	KNOWN	RP4-539M6.18	1	1	0.885869
chr22	30447959	30472049	30460004	ENSG00000100012.11	-	protein_coding	KNOWN	SEC14L3	7	14	0.758030
chr22	30475364	30492804	30484084	ENSG00000181123.8	+	antisense	KNOWN	RP4-539M6.14	5	7	0.748741
chr22	30481311	30481911	30481611	ENSG00000214161.3	-	processed_pseudogene	KNOWN	SDC4P	1	1	0.674265
chr22	30488913	30505711	30497312	ENSG00000133488.14	-	protein_coding	KNOWN	SEC14L4	4	13	1.107379
chr22	30522799	30546682	30534740	ENSG00000214491.8	-	protein_coding	KNOWN	SEC14L6	2	12	0.613420
chr22	30542536	30544305	30543420	ENSG00000225774.2	+	processed_pseudogene	KNOWN	SIRPAP1	1	1	0.611898
chr22	30554635	30574587	30564611	ENSG00000128242.12	-	protein_coding	KNOWN	GAL3ST1	22	6	0.598367
chr22	30576625	30607083	30591854	ENSG00000100029.17	-	protein_coding	KNOWN	PES1	13	17	0.775411
chr22	30598309	30606687	30602498	ENSG00000223831.1	+	sense_intronic	KNOWN	RP1-56J10.8	1	3	0.828957
chr22	30606838	30627278	30617058	ENSG00000185339.8	+	protein_coding	KNOWN	TCN2	7	10	0.912824
chr22	30635652	30669016	30652334	ENSG00000100036.12	+	protein_coding	KNOWN	SLC35E4	3	3	0.705768
chr22	30652051	30667890	30659970	ENSG00000167065.13	-	protein_coding	KNOWN	DUSP18	10	3	0.689391
chr22	30653877	30654814	30654345	ENSG00000250318.1	-	unprocessed_pseudogene	KNOWN	CTA-963H5.5	1	2	0.689391
chr22	30693782	30907824	30800803	ENSG00000184792.15	+	protein_coding	KNOWN	OSBP2	19	15	0.602563
chr22	30731540	30731649	30731594	ENSG00000264661.2	+	miRNA	NOVEL	AL022336.1	1	1	0.505035
chr22	30902219	30902781	30902500	ENSG00000237977.1	+	processed_pseudogene	KNOWN	EIF4HP2	1	1	0.835771
chr22	30922308	30932449	30927378	ENSG00000235989.3	+	antisense	KNOWN	MORC2-AS1	4	3	0.600060
chr22	30925130	30968298	30946714	ENSG00000133422.12	-	protein_coding	KNOWN	MORC2	6	27	0.598314
chr22	30970677	30979395	30975036	ENSG00000253352.8	+	antisense	KNOWN	TUG1	9	4	0.084043
chr22	30971005	30971149	30971077	ENSG00000276664.1	+	misc_RNA	NOVEL	TUG1_1	1	1	0.084043
chr22	30971296	30971382	30971339	ENSG00000276057.1	+	misc_RNA	NOVEL	TUG1_2	1	1	0.084043
chr22	30972857	30973093	30972975	ENSG00000276965.1	+	misc_RNA	NOVEL	TUG1_3	1	1	0.084043
chr22	30973417	30973597	30973507	ENSG00000275307.1	+	misc_RNA	NOVEL	TUG1_4	1	1	0.084043
chr22	30976515	30978848	30977681	ENSG00000269987.1	-	lincRNA	KNOWN	RP3-430N8.11	1	2	0.084043
chr22	30977516	30977858	30977687	ENSG00000269972.1	-	lincRNA	KNOWN	RP3-430N8.10	1	2	0.084043
chr22	31051630	31068327	31059978	ENSG00000278920.1	+	sense_overlapping	KNOWN	RP3-412A9.17	1	1	0.819371
chr22	31059989	31060285	31060137	ENSG00000240186.3	+	misc_RNA	KNOWN	RN7SL633P	1	1	0.819371
chr22	31064105	31104757	31084431	ENSG00000183963.18	+	protein_coding	KNOWN	SMTN	24	21	0.860764
chr22	31082156	31083565	31082860	ENSG00000273387.1	-	antisense	KNOWN	RP3-412A9.16	1	1	0.702340
chr22	31104772	31120069	31112420	ENSG00000198832.10	-	protein_coding	KNOWN	SELM	10	7	0.969951
chr22	31113017	31113396	31113206	ENSG00000235573.2	+	processed_pseudogene	KNOWN	RP3-412A9.12	1	1	0.906603
chr22	31122731	31134696	31128713	ENSG00000185133.13	+	protein_coding	KNOWN	INPP5J	13	15	0.997709
chr22	31134809	31140607	31137708	ENSG00000100078.3	-	protein_coding	KNOWN	PLA2G3	1	7	1.138685
chr22	31155966	31156647	31156306	ENSG00000214125.2	-	processed_pseudogene	KNOWN	RP3-412A9.15	1	1	0.894546
chr22	31160062	31160119	31160090	ENSG00000264141.1	-	miRNA	KNOWN	MIR3928	1	1	0.894546
chr22	31160183	31207019	31183601	ENSG00000138942.15	+	protein_coding	KNOWN	RNF185	7	8	0.941717
chr22	31205264	31205616	31205440	ENSG00000254835.1	-	antisense	KNOWN	RNF185-AS1	1	1	0.659676
chr22	31212239	31280080	31246159	ENSG00000182541.17	+	protein_coding	KNOWN	LIMK2	9	16	0.710262
chr22	31222745	31222853	31222799	ENSG00000199695.1	-	snRNA	KNOWN	RNU6-1128P	1	1	0.751218
chr22	31230071	31230172	31230121	ENSG00000202019.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.578551
chr22	31281593	31292534	31287063	ENSG00000100100.12	-	protein_coding	KNOWN	PIK3IP1	6	6	0.881510
chr22	31292499	31338021	31315260	ENSG00000228839.5	+	antisense	KNOWN	PIK3IP1-AS1	2	2	0.492470
chr22	31305404	31305512	31305458	ENSG00000212542.1	+	rRNA	KNOWN	RNA5SP496	1	1	0.619403
chr22	31325804	31346232	31336018	ENSG00000100105.17	-	protein_coding	KNOWN	PATZ1	6	5	0.572280
chr22	31346777	31348719	31347748	ENSG00000213888.3	+	lincRNA	KNOWN	LINC01521	2	1	0.636540
chr22	31388733	31388837	31388785	ENSG00000206615.1	-	snRNA	KNOWN	RNU6-338P	1	1	0.638559
chr22	31399523	31528740	31464131	ENSG00000185721.11	+	protein_coding	KNOWN	DRG1	6	9	0.567848
chr22	31436977	31496108	31466542	ENSG00000184708.17	-	protein_coding	KNOWN	EIF4ENIF1	13	19	0.610517
chr22	31454251	31464204	31459227	ENSG00000240591.1	+	antisense	KNOWN	RP11-247I13.11	2	2	0.656655
chr22	31479383	31479489	31479436	ENSG00000199248.1	-	snRNA	KNOWN	RNU6-28P	1	1	0.633786
chr22	31488688	31618586	31553637	ENSG00000198089.14	+	protein_coding	KNOWN	SFI1	30	33	0.607499
chr22	31521199	31521592	31521395	ENSG00000233733.1	-	processed_pseudogene	KNOWN	H2AFZP6	1	1	0.485137
chr22	31538352	31538589	31538470	ENSG00000229169.1	-	processed_pseudogene	KNOWN	RP11-247I13.6	1	1	0.423613
chr22	31559483	31559939	31559711	ENSG00000214093.3	+	processed_pseudogene	KNOWN	RP11-247I13.3	1	1	0.711568
chr22	31618491	31662432	31640461	ENSG00000241878.9	-	protein_coding	KNOWN	PISD	17	9	0.750171
chr22	31621467	31621531	31621499	ENSG00000275382.1	-	miRNA	KNOWN	MIR7109	1	1	1.039524
chr22	31676256	31750140	31713198	ENSG00000183530.13	-	protein_coding	KNOWN	PRR14L	7	9	0.482152
chr22	31753951	31907034	31830492	ENSG00000100150.16	+	protein_coding	KNOWN	DEPDC5	22	43	0.401747
chr22	31757202	31757498	31757350	ENSG00000242251.3	+	misc_RNA	KNOWN	RN7SL20P	1	1	0.615554
chr22	31816379	31817491	31816935	ENSG00000236132.1	-	processed_pseudogene	KNOWN	CTA-440B3.1	1	3	0.442324
chr22	31837238	31837298	31837268	ENSG00000252909.1	+	snRNA	KNOWN	RNU6-201P	1	1	0.314384
chr22	31890344	31891434	31890889	ENSG00000227813.1	-	processed_pseudogene	KNOWN	RP1-180M12.1	1	2	0.553778
chr22	31933521	31945518	31939519	ENSG00000128254.12	-	processed_transcript	KNOWN	C22orf24	3	3	0.386105
chr22	31944461	31957603	31951032	ENSG00000128245.14	+	protein_coding	KNOWN	YWHAH	6	3	0.277143
chr22	31963357	31970400	31966878	ENSG00000227519.1	+	lincRNA	KNOWN	CTA-342B11.1	1	2	0.212247
chr22	31970823	31973475	31972149	ENSG00000230866.1	+	lincRNA	KNOWN	CTA-342B11.2	2	3	0.451779
chr22	31981147	31981427	31981287	ENSG00000240647.3	-	misc_RNA	KNOWN	RN7SL305P	1	1	0.451779
chr22	32039490	32039896	32039693	ENSG00000232346.1	+	processed_pseudogene	KNOWN	SC22CB-1E7.1	1	1	0.006875
chr22	32043032	32113029	32078030	ENSG00000100170.9	+	protein_coding	KNOWN	SLC5A1	4	15	0.007072
chr22	32121977	32133469	32127723	ENSG00000234479.2	+	transcribed_unprocessed_pseudogene	KNOWN	AP1B1P1	2	4	0.025740
chr22	32129689	32130612	32130150	ENSG00000237439.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP1-127L4.10	1	2	0.106432
chr22	32134028	32134133	32134080	ENSG00000232707.1	+	unprocessed_pseudogene	KNOWN	AP1B1P2	1	1	0.181259
chr22	32141267	32143272	32142269	ENSG00000239674.2	+	lincRNA	KNOWN	RP1-127L4.7	1	2	0.181259
chr22	32149006	32159322	32154164	ENSG00000205856.3	-	protein_coding	KNOWN	C22orf42	3	9	0.065439
chr22	32159454	32160392	32159923	ENSG00000230120.1	-	lincRNA	KNOWN	RP1-90G24.8	1	2	0.053103
chr22	32188400	32188487	32188443	ENSG00000275656.1	-	misc_RNA	NOVEL	RFPL3-AS1_1	1	1	0.108671
chr22	32190435	32203477	32196956	ENSG00000128253.13	-	protein_coding	KNOWN	RFPL2	6	5	0.161254
chr22	32191094	32191452	32191273	ENSG00000279219.1	+	protein_coding	KNOWN	AL008723.1	1	1	0.161254
chr22	32199919	32200234	32200076	ENSG00000254127.1	+	IG_C_pseudogene	KNOWN	IGLCOR22-1	1	1	0.161254
chr22	32205115	32269666	32237390	ENSG00000242082.1	+	antisense	KNOWN	RP1-90G24.10	1	4	0.106291
chr22	32218476	32255341	32236908	ENSG00000100191.5	-	protein_coding	KNOWN	SLC5A4	1	15	0.139510
chr22	32269381	32273110	32271245	ENSG00000214076.3	+	processed_pseudogene	KNOWN	CPSF1P1	1	1	0.198176
chr22	32273420	32277186	32275303	ENSG00000224050.1	+	lincRNA	KNOWN	RP1-90G24.6	1	2	0.266197
chr22	32284683	32285131	32284907	ENSG00000273325.1	+	lincRNA	KNOWN	RP1-90G24.11	1	1	0.266197
chr22	32327171	32343105	32335138	ENSG00000234626.1	-	antisense	KNOWN	RP1-149A16.12	1	2	0.113100
chr22	32354885	32361161	32358023	ENSG00000128276.10	+	protein_coding	KNOWN	RFPL3	2	3	-0.060011
chr22	32356676	32356988	32356832	ENSG00000271093.1	-	IG_C_pseudogene	KNOWN	IGLCOR22-2	1	1	-0.060011
chr22	32359906	32382052	32370979	ENSG00000205853.10	-	protein_coding	KNOWN	RFPL3S	6	7	-0.035472
chr22	32362972	32363059	32363015	ENSG00000274617.1	+	misc_RNA	NOVEL	RFPL3-AS1_1	1	1	-0.060011
chr22	32368497	32368567	32368532	ENSG00000274170.1	+	misc_RNA	NOVEL	RFPL3-AS1_2	1	1	-0.060011
chr22	32376664	32384343	32380503	ENSG00000230736.2	+	lincRNA	KNOWN	RP1-149A16.3	1	3	-0.014923
chr22	32376682	32377135	32376908	ENSG00000243519.1	+	IG_V_pseudogene	KNOWN	IGLVIVOR22-2	1	2	-0.014923
chr22	32383786	32385631	32384708	ENSG00000241954.1	+	lincRNA	KNOWN	RP1-149A16.17	1	2	-0.014923
chr22	32386668	32386868	32386768	ENSG00000232218.1	+	unprocessed_pseudogene	KNOWN	RP1-149A16.16	1	1	-0.014923
chr22	32387582	32412255	32399918	ENSG00000100220.11	-	protein_coding	KNOWN	RTCB	6	12	0.216114
chr22	32413847	32464484	32439165	ENSG00000184459.8	-	protein_coding	KNOWN	BPIFC	4	16	0.031223
chr22	32474676	32498829	32486752	ENSG00000100225.17	+	protein_coding	KNOWN	FBXO7	9	9	-0.027315
chr22	32512552	33058372	32785462	ENSG00000185666.14	-	protein_coding	KNOWN	SYN3	13	14	0.352055
chr22	32583300	32584204	32583752	ENSG00000236054.1	+	antisense	KNOWN	LL22NC03-104C7.1	1	2	0.740064
chr22	32635102	32635198	32635150	ENSG00000251890.1	-	rRNA	KNOWN	RNA5SP497	1	1	0.243235
chr22	32783177	32784982	32784079	ENSG00000229673.1	+	antisense	KNOWN	LL22NC01-116C6.1	1	2	0.318381
chr22	32801701	32863043	32832372	ENSG00000100234.11	+	protein_coding	KNOWN	TIMP3	1	5	0.667508
chr22	33014980	33015461	33015220	ENSG00000228194.1	+	processed_pseudogene	KNOWN	CTA-415G2.2	1	2	0.028566
chr22	33105383	33106059	33105721	ENSG00000228622.1	-	lincRNA	KNOWN	RP1-302D9.1	1	2	-0.050302
chr22	33108529	33116294	33112411	ENSG00000231253.1	+	lincRNA	KNOWN	RP1-302D9.2	1	4	0.026065
chr22	33137140	33137338	33137239	ENSG00000233632.1	+	processed_pseudogene	KNOWN	RP1-302D9.5	1	1	-0.026653
chr22	33162226	33922841	33542533	ENSG00000133424.20	-	protein_coding	KNOWN	LARGE	16	16	-0.006227
chr22	33164063	33166439	33165251	ENSG00000232073.1	+	antisense	KNOWN	RP1-302D9.3	1	2	-0.119984
chr22	33320865	33322813	33321839	ENSG00000230741.1	+	antisense	KNOWN	SC22CB-1D7.1	1	2	0.253879
chr22	33436582	33436669	33436625	ENSG00000266012.1	-	miRNA	KNOWN	MIR4764	1	1	0.053103
chr22	33704786	33704922	33704854	ENSG00000281295.1	-	snoRNA	NOVEL	SNORA50	1	1	0.013989
chr22	33704786	33704920	33704853	ENSG00000253007.2	-	snoRNA	NOVEL	SNORA76	1	1	0.013989
chr22	33723832	33724912	33724372	ENSG00000232081.1	-	sense_intronic	KNOWN	LARGE-IT1	1	2	0.021219
chr22	33725014	33750843	33737928	ENSG00000224973.5	+	processed_transcript	KNOWN	LARGE-AS1	7	10	-0.017906
chr22	33922422	33922766	33922594	ENSG00000273082.1	+	antisense	KNOWN	LL22NC03-32F9.1	1	1	0.261917
chr22	34017473	34188425	34102949	ENSG00000236052.1	+	lincRNA	KNOWN	LL22NC03-86D4.1	1	8	-0.219946
chr22	34208141	34209262	34208701	ENSG00000224404.1	-	lincRNA	KNOWN	LL22NC03-13G6.2	1	2	-0.024105
chr22	34589085	34591278	34590181	ENSG00000235485.1	-	processed_pseudogene	KNOWN	RP1-101G11.2	1	1	-0.308999
chr22	34641179	34651862	34646520	ENSG00000280356.1	+	lincRNA	KNOWN	RP1-101G11.3	1	1	-0.147494
chr22	34703126	34704885	34704005	ENSG00000234891.1	-	lincRNA	KNOWN	RP1-288L1.5	1	3	-0.224482
chr22	34711908	34724919	34718413	ENSG00000237316.1	-	lincRNA	KNOWN	RP1-288L1.4	1	4	-0.263273
chr22	34997719	35002862	35000290	ENSG00000227895.5	-	lincRNA	KNOWN	ISX-AS1	1	2	0.076562
chr22	35066136	35087387	35076761	ENSG00000175329.12	+	protein_coding	KNOWN	ISX	2	5	-0.164197
chr22	35119824	35231056	35175440	ENSG00000233080.2	-	lincRNA	KNOWN	LINC01399	1	6	0.101511
chr22	35122661	35127419	35125040	ENSG00000273068.1	+	lincRNA	KNOWN	CTA-714B7.7	1	2	0.003636
chr22	35160947	35215025	35187986	ENSG00000279184.1	+	antisense	KNOWN	RP3-323A16.1	1	1	0.091750
chr22	35164304	35165347	35164825	ENSG00000238153.1	+	processed_pseudogene	KNOWN	CTA-714B7.4	1	2	0.251648
chr22	35194699	35194942	35194820	ENSG00000243453.1	-	processed_pseudogene	KNOWN	COX7BP1	1	1	-0.157036
chr22	35249772	35249833	35249802	ENSG00000238584.1	+	snRNA	KNOWN	RNU7-167P	1	1	0.130881
chr22	35257452	35295807	35276629	ENSG00000100281.13	+	protein_coding	KNOWN	HMGXB4	8	12	0.194095
chr22	35298838	35299541	35299189	ENSG00000273176.1	-	antisense	KNOWN	RP3-510H16.3	1	2	0.249232
chr22	35299275	35347994	35323634	ENSG00000100284.20	+	protein_coding	KNOWN	TOM1	19	17	0.611708
chr22	35335640	35335758	35335699	ENSG00000266320.1	+	miRNA	KNOWN	MIR3909	1	1	0.799312
chr22	35336721	35336799	35336760	ENSG00000274280.1	-	miRNA	KNOWN	MIR6069	1	1	0.799312
chr22	35372174	35372621	35372397	ENSG00000282602.1	+	lincRNA	KNOWN	CTA-286B10.7	1	1	0.645683
chr22	35376422	35377261	35376841	ENSG00000282041.1	+	lincRNA	KNOWN	CTA-286B10.8	1	1	0.645683
chr22	35380361	35394214	35387287	ENSG00000100292.16	+	protein_coding	KNOWN	HMOX1	4	5	0.623312
chr22	35400063	35425430	35412746	ENSG00000100297.15	+	protein_coding	KNOWN	MCM5	10	17	0.682849
chr22	35501861	35503586	35502723	ENSG00000233388.2	-	processed_pseudogene	KNOWN	RP4-569D19.5	1	1	0.380237
chr22	35526932	35527415	35527173	ENSG00000273044.1	+	lincRNA	KNOWN	RP4-569D19.8	1	1	0.714709
chr22	35540868	35554001	35547434	ENSG00000100302.6	+	protein_coding	KNOWN	RASD2	1	3	0.536076
chr22	35606764	35637951	35622357	ENSG00000198125.12	-	protein_coding	KNOWN	MB	10	4	0.660720
chr22	35626988	35635134	35631061	ENSG00000268818.2	-	sense_intronic	KNOWN	CITF22-62D4.1	1	2	0.709135
chr22	35648395	35668409	35658402	ENSG00000221963.5	+	protein_coding	KNOWN	APOL6	1	3	0.553290
chr22	35685940	35689373	35687656	ENSG00000228587.1	+	lincRNA	KNOWN	RP1-41P2.7	1	2	0.593469
chr22	35703803	35704176	35703989	ENSG00000226336.2	+	processed_pseudogene	KNOWN	MRPS16P3	1	1	0.329275
chr22	35717872	35729483	35723677	ENSG00000128313.2	+	protein_coding	KNOWN	APOL5	1	5	0.184185
chr22	35738736	36028425	35883580	ENSG00000100320.22	-	protein_coding	KNOWN	RBFOX2	14	14	0.382475
chr22	35897270	35898404	35897837	ENSG00000237406.1	-	processed_pseudogene	KNOWN	NDUFA9P1	1	1	0.382178
chr22	35992321	36000469	35996395	ENSG00000279652.1	+	lincRNA	KNOWN	RP1-78B3.1	1	1	0.679866
chr22	36066533	36070110	36068321	ENSG00000279927.1	+	lincRNA	KNOWN	CTA-212A2.4	1	1	0.939833
chr22	36071000	36085573	36078286	ENSG00000279217.1	+	lincRNA	KNOWN	CTA-212A2.3	1	1	0.633627
chr22	36091148	36093352	36092250	ENSG00000279714.1	+	lincRNA	KNOWN	CTA-212A2.2	1	1	0.656655
chr22	36137430	36139350	36138390	ENSG00000279805.1	-	TEC	KNOWN	CTA-212A2.1	1	1	0.717462
chr22	36140330	36166177	36153253	ENSG00000128284.19	-	protein_coding	KNOWN	APOL3	21	5	0.791298
chr22	36172422	36172779	36172600	ENSG00000233764.1	+	processed_pseudogene	KNOWN	MTCO1P20	1	1	0.236382
chr22	36172934	36173948	36173441	ENSG00000231576.1	+	processed_pseudogene	KNOWN	Z95114.3	1	2	0.236382
chr22	36174261	36174822	36174541	ENSG00000237948.1	+	processed_pseudogene	KNOWN	Z95114.5	1	1	0.236382
chr22	36175167	36175854	36175510	ENSG00000225557.1	+	processed_pseudogene	KNOWN	Z95114.6	1	1	0.236382
chr22	36175857	36176526	36176191	ENSG00000237129.1	+	processed_pseudogene	KNOWN	Z95114.7	1	1	0.236382
chr22	36178554	36179385	36178969	ENSG00000229088.1	+	processed_pseudogene	KNOWN	MTND1P10	1	1	0.236382
chr22	36189124	36204840	36196982	ENSG00000100336.17	-	protein_coding	KNOWN	APOL4	12	6	0.740351
chr22	36226203	36239954	36233078	ENSG00000128335.13	-	protein_coding	KNOWN	APOL2	9	6	0.808655
chr22	36253010	36267530	36260270	ENSG00000100342.20	+	protein_coding	KNOWN	APOL1	12	7	1.087767
chr22	36281281	36388018	36334649	ENSG00000100345.20	-	protein_coding	KNOWN	MYH9	11	41	1.137724
chr22	36286847	36286907	36286877	ENSG00000278420.1	-	miRNA	KNOWN	MIR6819	1	1	0.840627
chr22	36388626	36396517	36392571	ENSG00000223695.1	+	lincRNA	KNOWN	RP4-633O19__A.1	1	2	0.916621
chr22	36421273	36421644	36421458	ENSG00000237668.1	-	processed_pseudogene	KNOWN	RPS15AP38	1	1	0.612324
chr22	36438824	36438926	36438875	ENSG00000252575.1	-	miRNA	NOVEL	BX470187.1	1	1	0.899347
chr22	36440880	36440970	36440925	ENSG00000252225.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.899347
chr22	36445395	36454944	36450169	ENSG00000228719.1	-	lincRNA	KNOWN	RP5-1119A7.14	1	2	0.989214
chr22	36467036	36482030	36474533	ENSG00000100348.9	-	protein_coding	KNOWN	TXN2	5	5	1.260157
chr22	36487190	36507101	36497145	ENSG00000100350.14	-	protein_coding	KNOWN	FOXRED2	5	9	1.114690
chr22	36510850	36529436	36520143	ENSG00000100353.17	-	protein_coding	KNOWN	EIF3D	12	15	0.771023
chr22	36536656	36537604	36537130	ENSG00000188078.5	-	unprocessed_pseudogene	KNOWN	RP5-1119A7.11	1	2	0.423613
chr22	36552165	36552700	36552432	ENSG00000229971.1	+	antisense	KNOWN	RP5-1119A7.10	1	2	0.813691
chr22	36560870	36562915	36561892	ENSG00000261675.1	-	sense_overlapping	KNOWN	RP5-1119A7.17	1	1	0.813691
chr22	36563921	36703558	36633739	ENSG00000166862.6	-	protein_coding	KNOWN	CACNG2	2	4	0.441405
chr22	36703918	36721472	36712695	ENSG00000234688.1	+	antisense	KNOWN	RP1-293L6.1	1	2	0.507733
chr22	36758202	36776256	36767229	ENSG00000100360.14	-	protein_coding	KNOWN	IFT27	12	7	0.537946
chr22	36800684	36819479	36810081	ENSG00000100362.12	-	protein_coding	KNOWN	PVALB	6	5	0.653667
chr22	36816326	36819736	36818031	ENSG00000234979.1	+	antisense	KNOWN	CITF22-24E5.1	1	3	0.552833
chr22	36847372	36870441	36858906	ENSG00000183822.3	-	antisense	KNOWN	CTA-833B7.2	2	2	0.513012
chr22	36860988	36878015	36869501	ENSG00000100365.14	+	protein_coding	KNOWN	NCF4	4	10	0.595820
chr22	36913628	36940449	36927038	ENSG00000100368.13	+	protein_coding	KNOWN	CSF2RB	4	15	0.651265
chr22	36950529	36953723	36952126	ENSG00000232254.1	-	unprocessed_pseudogene	KNOWN	CSF2RBP1	1	3	0.636540
chr22	36965248	36968172	36966710	ENSG00000215403.1	+	antisense	KNOWN	LL22NC01-81G9.3	1	4	0.636540
chr22	36991120	37007841	36999480	ENSG00000185264.11	-	protein_coding	KNOWN	TEX33	4	7	0.831032
chr22	37010859	37020183	37015521	ENSG00000128311.13	-	protein_coding	KNOWN	TST	4	3	0.530113
chr22	37013225	37013319	37013272	ENSG00000252412.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.530113
chr22	37019635	37029822	37024728	ENSG00000128309.16	+	protein_coding	KNOWN	MPST	8	4	0.530113
chr22	37051736	37063390	37057563	ENSG00000100379.17	+	protein_coding	KNOWN	KCTD17	9	9	0.697713
chr22	37055033	37055347	37055190	ENSG00000201078.1	-	misc_RNA	KNOWN	RN7SKP214	1	1	0.697713
chr22	37065436	37109563	37087499	ENSG00000187045.16	-	protein_coding	KNOWN	TMPRSS6	7	19	0.831063
chr22	37080068	37082847	37081457	ENSG00000231467.2	+	antisense	KNOWN	RP5-1170K4.7	1	3	0.830475
chr22	37125838	37175054	37150446	ENSG00000100385.13	-	protein_coding	KNOWN	IL2RB	7	10	0.732048
chr22	37138024	37138083	37138053	ENSG00000252142.1	+	miRNA	NOVEL	AL022314.1	1	1	0.772112
chr22	37166757	37182850	37174803	ENSG00000235237.1	+	antisense	KNOWN	RP1-151B14.6	1	2	0.721762
chr22	37180167	37199385	37189776	ENSG00000133466.13	-	protein_coding	KNOWN	C1QTNF6	7	9	0.708566
chr22	37204238	37212322	37208280	ENSG00000278195.1	-	protein_coding	KNOWN	SSTR3	2	2	0.776806
chr22	37215738	37215891	37215814	ENSG00000226233.1	-	processed_pseudogene	KNOWN	RP1-151B14.9	1	1	0.998882
chr22	37225261	37244448	37234854	ENSG00000128340.14	-	protein_coding	KNOWN	RAC2	7	7	0.739250
chr22	37282027	37315345	37298686	ENSG00000100055.20	+	protein_coding	KNOWN	CYTH4	11	13	0.765008
chr22	37339583	37427445	37383514	ENSG00000243902.6	-	sense_overlapping	KNOWN	ELFN2	2	3	1.037804
chr22	37352190	37354839	37353514	ENSG00000237862.1	-	sense_intronic	KNOWN	RP1-63G5.7	1	2	0.938236
chr22	37367960	37427470	37397715	ENSG00000166897.14	-	protein_coding	KNOWN	ELFN2	7	3	1.059196
chr22	37371684	37372858	37372271	ENSG00000272694.1	+	antisense	KNOWN	RP1-63G5.8	1	2	1.065192
chr22	37469063	37486401	37477732	ENSG00000100060.17	-	protein_coding	KNOWN	MFNG	10	8	0.707136
chr22	37490362	37519542	37504952	ENSG00000100065.14	-	protein_coding	KNOWN	CARD10	10	21	1.074120
chr22	37550026	37551735	37550880	ENSG00000225867.1	+	antisense	KNOWN	RP5-1177I5.3	1	2	1.062845
chr22	37560447	37569405	37564926	ENSG00000128283.6	+	protein_coding	KNOWN	CDC42EP1	4	3	1.062845
chr22	37570246	37582616	37576431	ENSG00000100079.6	-	protein_coding	KNOWN	LGALS2	2	4	1.070618
chr22	37578669	37578922	37578795	ENSG00000273866.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.070618
chr22	37608475	37633564	37621019	ENSG00000100083.18	+	protein_coding	KNOWN	GGA1	23	18	1.109071
chr22	37634654	37666932	37650793	ENSG00000100092.20	+	protein_coding	KNOWN	SH3BP1	8	20	1.288853
chr22	37641832	37658377	37650104	ENSG00000233360.4	-	antisense	KNOWN	Z83844.1	1	6	1.296055
chr22	37658727	37666934	37662830	ENSG00000241360.1	+	protein_coding	KNOWN	PDXP	2	2	1.100981
chr22	37669464	37669739	37669601	ENSG00000241333.3	-	misc_RNA	KNOWN	RN7SL385P	1	1	1.100981
chr22	37675608	37679806	37677707	ENSG00000100097.11	+	protein_coding	KNOWN	LGALS1	7	5	1.121393
chr22	37681673	37693478	37687575	ENSG00000273899.4	+	protein_coding	KNOWN	NOL12	7	7	1.169697
chr22	37686414	37726503	37706458	ENSG00000100101.15	+	protein_coding	KNOWN	RP1-37E16.12	1	13	1.157112
chr22	37697004	37776556	37736780	ENSG00000100106.19	+	protein_coding	KNOWN	TRIOBP	11	24	1.134575
chr22	37805093	37807436	37806264	ENSG00000189060.5	+	protein_coding	KNOWN	H1F0	1	1	1.116321
chr22	37807905	37817176	37812540	ENSG00000100116.16	+	protein_coding	KNOWN	GCAT	7	10	0.931479
chr22	37823382	37825495	37824438	ENSG00000128310.2	+	protein_coding	KNOWN	GALR3	1	2	0.877548
chr22	37830855	37849327	37840091	ENSG00000100124.12	-	protein_coding	KNOWN	ANKRD54	12	8	0.969618
chr22	37844272	37844371	37844321	ENSG00000207945.1	-	miRNA	KNOWN	MIR658	1	1	0.969618
chr22	37847678	37847774	37847726	ENSG00000207696.1	-	miRNA	KNOWN	MIR659	1	1	0.969618
chr22	37848868	37889407	37869137	ENSG00000100129.17	+	protein_coding	KNOWN	EIF3L	14	13	0.789273
chr22	37876148	37895563	37885855	ENSG00000279738.1	+	sense_overlapping	KNOWN	RP5-1014D13.2	1	1	0.723627
chr22	37891347	37891448	37891397	ENSG00000207227.1	+	snRNA	KNOWN	RNU6-900P	1	1	1.051350
chr22	37905657	37942822	37924239	ENSG00000100139.13	+	protein_coding	KNOWN	MICALL1	6	16	1.239967
chr22	37943050	37944898	37943974	ENSG00000278948.1	+	TEC	KNOWN	RP5-1039K5.12	1	1	1.205450
chr22	37943050	37953669	37948359	ENSG00000128346.10	-	protein_coding	KNOWN	C22orf23	6	7	1.172931
chr22	37946326	37946426	37946376	ENSG00000280527.1	+	miRNA	NOVEL	AL031587.1	1	1	1.205450
chr22	37948352	38002889	37975620	ENSG00000279010.1	+	sense_overlapping	KNOWN	RP5-1039K5.19	1	1	0.985558
chr22	37950965	37951778	37951371	ENSG00000272582.1	+	antisense	KNOWN	RP5-1039K5.17	1	1	1.111357
chr22	37952607	38041915	37997261	ENSG00000100142.14	+	protein_coding	KNOWN	POLR2F	14	8	0.960409
chr22	37967563	37967624	37967593	ENSG00000277321.1	+	miRNA	KNOWN	MIR6820	1	1	1.111357
chr22	37970686	37987422	37979054	ENSG00000100146.16	-	protein_coding	KNOWN	SOX10	5	5	0.877052
chr22	37988794	37988853	37988823	ENSG00000264505.1	+	miRNA	KNOWN	MIR4534	1	1	0.877052
chr22	38032165	38034228	38033196	ENSG00000222044.1	-	antisense	KNOWN	RP5-1039K5.16	1	2	1.108866
chr22	38043230	38043920	38043575	ENSG00000273214.1	+	lincRNA	KNOWN	RP5-1039K5.18	1	1	1.108866
chr22	38056311	38075701	38066006	ENSG00000100151.15	+	protein_coding	KNOWN	PICK1	15	13	0.874399
chr22	38057180	38073940	38065560	ENSG00000233739.1	-	antisense	KNOWN	RP5-1039K5.13	1	2	0.852722
chr22	38078134	38084093	38081113	ENSG00000100156.10	-	protein_coding	KNOWN	SLC16A8	3	5	1.134083
chr22	38084889	38110670	38097779	ENSG00000128298.16	-	protein_coding	KNOWN	BAIAP2L2	3	15	1.012778
chr22	38090127	38091559	38090843	ENSG00000272720.1	+	lincRNA	KNOWN	CTA-228A9.3	1	1	0.980960
chr22	38111495	38205690	38158592	ENSG00000184381.18	-	protein_coding	KNOWN	PLA2G6	28	17	0.923592
chr22	38130216	38150612	38140414	ENSG00000279080.1	+	antisense	KNOWN	CTA-228A9.4	1	1	0.900590
chr22	38200767	38216511	38208639	ENSG00000185022.11	+	protein_coding	KNOWN	MAFF	8	3	0.931549
chr22	38219291	38273034	38246162	ENSG00000198792.12	-	protein_coding	KNOWN	TMEM184B	13	10	1.007402
chr22	38231320	38232248	38231784	ENSG00000235246.1	+	antisense	KNOWN	RP1-5O6.5	1	2	1.060283
chr22	38231720	38231993	38231856	ENSG00000241693.2	+	misc_RNA	KNOWN	RN7SL704P	1	1	1.060283
chr22	38274339	38274424	38274381	ENSG00000265311.1	-	miRNA	NOVEL	AL020993.1	1	1	0.653871
chr22	38281028	38281289	38281158	ENSG00000277385.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.653871
chr22	38290691	38398522	38344606	ENSG00000213923.10	-	protein_coding	KNOWN	CSNK1E	16	15	0.845610
chr22	38335762	38398929	38367345	ENSG00000244627.5	-	transcribed_unprocessed_pseudogene	KNOWN	RP3-449O17.1	10	8	0.622035
chr22	38387918	38388857	38388387	ENSG00000229955.1	-	sense_intronic	KNOWN	RP1-5O6.4	1	2	0.261011
chr22	38424288	38427336	38425812	ENSG00000228620.1	+	antisense	KNOWN	RP3-434P1.6	1	3	0.859673
chr22	38426327	38455199	38440763	ENSG00000168135.4	-	protein_coding	KNOWN	KCNJ4	1	2	0.941251
chr22	38468062	38483447	38475754	ENSG00000100196.10	+	protein_coding	KNOWN	KDELR3	3	5	0.978033
chr22	38483440	38507660	38495550	ENSG00000100201.19	-	protein_coding	KNOWN	DDX17	10	13	0.699332
chr22	38518949	38570286	38544617	ENSG00000100206.9	-	protein_coding	KNOWN	DMC1	7	14	0.506062
chr22	38574931	38575431	38575181	ENSG00000224279.2	-	processed_pseudogene	KNOWN	RP1-199H16.6	1	2	0.598952
chr22	38578120	38656629	38617374	ENSG00000184949.15	-	protein_coding	KNOWN	FAM227A	11	19	0.596195
chr22	38656636	38673854	38665245	ENSG00000100211.10	+	protein_coding	KNOWN	CBY1	11	6	0.530406
chr22	38666508	38668750	38667629	ENSG00000230912.1	-	antisense	KNOWN	RP3-508I15.10	1	2	0.410600
chr22	38667585	38681820	38674702	ENSG00000228274.3	-	antisense	KNOWN	RP3-508I15.9	4	2	0.854958
chr22	38681948	38685421	38683684	ENSG00000100216.5	+	protein_coding	KNOWN	TOMM22	2	4	0.945702
chr22	38685543	38701556	38693549	ENSG00000100221.10	-	protein_coding	KNOWN	JOSD1	10	4	0.916637
chr22	38705723	38738299	38722011	ENSG00000100226.15	+	protein_coding	KNOWN	GTPBP1	13	12	0.846621
chr22	38722743	38723505	38723124	ENSG00000229598.1	-	processed_pseudogene	KNOWN	PRDX3P1	1	1	0.801990
chr22	38734725	38738765	38736745	ENSG00000244491.1	+	antisense	KNOWN	RP3-508I15.18	1	2	0.923869
chr22	38734725	38794143	38764434	ENSG00000100242.15	-	protein_coding	KNOWN	SUN2	18	19	1.014590
chr22	38734730	38738990	38736860	ENSG00000230149.2	+	antisense	KNOWN	RP3-508I15.19	1	3	0.923869
chr22	38736610	38736792	38736701	ENSG00000273096.1	-	sense_intronic	KNOWN	RP3-508I15.20	1	1	0.923869
chr22	38739003	38749041	38744022	ENSG00000225450.1	+	antisense	KNOWN	RP3-508I15.14	1	2	0.923869
chr22	38742625	38743115	38742870	ENSG00000272669.1	+	antisense	KNOWN	RP3-508I15.21	1	1	0.923869
chr22	38743495	38743910	38743702	ENSG00000273076.1	+	antisense	KNOWN	RP3-508I15.22	1	1	0.923869
chr22	38778508	38794198	38786353	ENSG00000100246.12	-	protein_coding	KNOWN	DNAL4	4	4	1.018783
chr22	38818452	38843982	38831217	ENSG00000221890.2	-	protein_coding	KNOWN	NPTXR	1	5	0.673042
chr22	38861450	38872314	38866882	ENSG00000183741.11	-	protein_coding	KNOWN	CBX6	3	5	0.801584
chr22	38921227	38924708	38922967	ENSG00000235209.1	+	lincRNA	KNOWN	CTA-150C2.13	1	2	0.189458
chr22	38952741	38992778	38972759	ENSG00000128383.12	+	protein_coding	KNOWN	APOBEC3A	5	6	0.822953
chr22	38982347	38992804	38987575	ENSG00000179750.15	+	protein_coding	KNOWN	APOBEC3B	4	8	0.780964
chr22	38991559	38998209	38994884	ENSG00000249310.2	-	antisense	KNOWN	APOBEC3B-AS1	1	5	0.847508
chr22	39014083	39020352	39017217	ENSG00000244509.3	+	protein_coding	KNOWN	APOBEC3C	2	4	0.846879
chr22	39014363	39033276	39023819	ENSG00000243811.7	+	protein_coding	KNOWN	APOBEC3D	4	7	0.833199
chr22	39040604	39053910	39047257	ENSG00000128394.16	+	protein_coding	KNOWN	APOBEC3F	4	7	0.829853
chr22	39040961	39087743	39064352	ENSG00000239713.7	+	protein_coding	KNOWN	APOBEC3G	8	8	0.843167
chr22	39070414	39070671	39070542	ENSG00000259421.1	+	unprocessed_pseudogene	KNOWN	CTA-150C2.20	1	1	0.728826
chr22	39091586	39092855	39092220	ENSG00000225720.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP4-742C19.12	2	3	0.719621
chr22	39097224	39104067	39100645	ENSG00000100298.15	+	protein_coding	KNOWN	APOBEC3H	7	6	0.719621
chr22	39120167	39152674	39136420	ENSG00000100307.12	-	protein_coding	KNOWN	CBX7	7	6	0.817467
chr22	39120293	39120566	39120429	ENSG00000226024.1	-	processed_pseudogene	KNOWN	COX5BP7	1	1	0.473241
chr22	39133090	39136760	39134925	ENSG00000279833.1	+	antisense	KNOWN	RP4-742C19.13	1	1	0.974340
chr22	39155525	39155945	39155735	ENSG00000227009.1	+	processed_pseudogene	KNOWN	FUNDC2P4	1	1	0.909788
chr22	39223359	39244751	39234055	ENSG00000100311.16	-	protein_coding	KNOWN	PDGFB	4	7	0.828907
chr22	39292988	39295563	39294275	ENSG00000224794.1	+	antisense	KNOWN	RP3-333H23.8	1	2	0.968844
chr22	39312882	39320389	39316635	ENSG00000100316.15	-	protein_coding	KNOWN	RPL3	18	10	1.108866
chr22	39313819	39313911	39313865	ENSG00000209480.1	-	snoRNA	KNOWN	SNORD83B	1	1	1.108866
chr22	39315213	39315307	39315260	ENSG00000209482.1	-	snoRNA	KNOWN	SNORD83A	1	1	1.108866
chr22	39319019	39319147	39319083	ENSG00000280859.1	-	miRNA	NOVEL	AL022326.1	1	1	1.108866
chr22	39319050	39319113	39319081	ENSG00000263764.1	-	snoRNA	KNOWN	SNORD43	1	1	1.108866
chr22	39349925	39385588	39367756	ENSG00000100321.14	+	protein_coding	KNOWN	SYNGR1	7	4	0.802004
chr22	39379610	39380015	39379812	ENSG00000280216.1	+	TEC	KNOWN	RP3-333H23.9	1	1	0.841381
chr22	39399741	39437060	39418400	ENSG00000100324.13	+	protein_coding	KNOWN	TAB1	7	11	0.702223
chr22	39457344	39492194	39474769	ENSG00000128268.11	+	protein_coding	KNOWN	MGAT3	3	3	1.058676
chr22	39475807	39476822	39476314	ENSG00000227188.1	-	antisense	KNOWN	MGAT3-AS1	1	2	1.136661
chr22	39499432	39518132	39508782	ENSG00000100335.12	+	protein_coding	KNOWN	MIEF1	14	7	0.919329
chr22	39519695	39522685	39521190	ENSG00000128272.14	+	protein_coding	KNOWN	ATF4	3	4	0.943778
chr22	39529093	39532855	39530974	ENSG00000187051.8	-	protein_coding	KNOWN	RPS19BP1	6	5	1.119857
chr22	39570753	39689737	39630245	ENSG00000100346.17	+	protein_coding	KNOWN	CACNA1I	5	37	0.729175
chr22	39743044	39893864	39818454	ENSG00000176177.9	-	protein_coding	KNOWN	ENTHD1	2	7	0.072014
chr22	39750127	39751293	39750710	ENSG00000235647.1	+	processed_pseudogene	KNOWN	RP1-172B20.6	1	1	-0.050613
chr22	39874255	39874515	39874385	ENSG00000238875.1	-	misc_RNA	KNOWN	RN7SKP210	1	1	-0.014267
chr22	39875289	39876108	39875698	ENSG00000226085.3	+	processed_pseudogene	KNOWN	UQCRFS1P1	1	1	-0.014267
chr22	39901082	39973721	39937401	ENSG00000100351.16	+	protein_coding	KNOWN	GRAP2	7	8	0.198510
chr22	39960397	39964718	39962557	ENSG00000225528.2	+	transcribed_processed_pseudogene	KNOWN	RP3-370M22.8	2	2	0.192452
chr22	39994949	40043529	40019239	ENSG00000133477.16	+	protein_coding	KNOWN	FAM83F	3	5	0.650969
chr22	40043068	40044530	40043799	ENSG00000261202.1	-	antisense	KNOWN	RP3-496C20.1	1	1	0.870965
chr22	40044817	40335808	40190312	ENSG00000100354.20	+	protein_coding	KNOWN	TNRC6B	9	24	0.386012
chr22	40106325	40107066	40106695	ENSG00000228599.1	-	processed_pseudogene	KNOWN	RPL7P52	1	1	0.316865
chr22	40346500	40369367	40357933	ENSG00000239900.11	+	protein_coding	KNOWN	ADSL	15	13	0.502517
chr22	40364958	40404362	40384660	ENSG00000279624.3	+	protein_coding	KNOWN	RP5-1042K10.14	2	6	0.597062
chr22	40370591	40410289	40390440	ENSG00000100359.20	+	protein_coding	KNOWN	SGSM3	13	22	0.583183
chr22	40372664	40388290	40380477	ENSG00000229999.6	-	antisense	KNOWN	RP5-1042K10.10	3	4	0.740228
chr22	40410281	40636702	40523491	ENSG00000196588.14	-	protein_coding	KNOWN	MKL1	13	15	0.600073
chr22	40415003	40415445	40415224	ENSG00000272834.1	+	antisense	KNOWN	RP5-1042K10.13	1	1	1.204143
chr22	40433136	40433641	40433388	ENSG00000227413.1	+	processed_pseudogene	KNOWN	RP5-1042K10.12	1	2	0.949120
chr22	40521800	40526707	40524253	ENSG00000232564.3	+	antisense	KNOWN	RP4-591N18.2	1	4	0.497811
chr22	40528057	40528133	40528095	ENSG00000252124.1	-	miRNA	NOVEL	AL031594.1	1	1	0.497811
chr22	40569286	40569895	40569590	ENSG00000172912.4	+	processed_pseudogene	KNOWN	COX6B1P3	1	2	0.304840
chr22	40586700	40588003	40587351	ENSG00000230071.2	-	processed_pseudogene	KNOWN	RPL4P6	1	1	0.591346
chr22	40673484	40674451	40673967	ENSG00000231907.2	-	processed_pseudogene	KNOWN	GAPDHP37	1	1	0.474363
chr22	40678750	40682814	40680782	ENSG00000128285.4	+	protein_coding	KNOWN	MCHR1	4	3	0.474363
chr22	40769630	40819399	40794514	ENSG00000100372.14	-	protein_coding	KNOWN	SLC25A17	17	11	0.501866
chr22	40788777	40789267	40789022	ENSG00000230769.1	-	processed_pseudogene	KNOWN	RP3-408N23.4	1	1	0.480062
chr22	40798039	40798285	40798162	ENSG00000233603.1	+	processed_pseudogene	KNOWN	JTBP1	1	1	0.531615
chr22	40813883	40813958	40813920	ENSG00000266594.1	-	miRNA	KNOWN	MIR4766	1	1	0.483075
chr22	40824535	40857022	40840778	ENSG00000100380.12	-	protein_coding	KNOWN	ST13	8	13	0.373750
chr22	40857077	40932815	40894946	ENSG00000196236.12	+	protein_coding	KNOWN	XPNPEP3	6	11	0.518578
chr22	40859549	40862126	40860837	ENSG00000172404.4	-	protein_coding	KNOWN	DNAJB7	1	1	0.471925
chr22	40917111	40917381	40917246	ENSG00000273979.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.686477
chr22	40917743	40917846	40917794	ENSG00000200683.1	+	snRNA	KNOWN	RNU6-379P	1	1	0.686477
chr22	40951347	40973309	40962328	ENSG00000100387.8	+	protein_coding	KNOWN	RBX1	3	5	0.539471
chr22	41045497	41045591	41045544	ENSG00000222698.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.864124
chr22	41060632	41060701	41060666	ENSG00000280863.1	-	miRNA	NOVEL	AL080243.1	1	1	0.598271
chr22	41064052	41064633	41064342	ENSG00000237214.3	+	processed_pseudogene	KNOWN	RP11-12M9.3	1	1	0.598271
chr22	41065554	41065646	41065600	ENSG00000199515.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.598271
chr22	41074180	41075239	41074709	ENSG00000213857.3	-	processed_pseudogene	KNOWN	RP11-12M9.4	1	1	0.711306
chr22	41091786	41180079	41135932	ENSG00000100393.10	+	protein_coding	KNOWN	EP300	11	31	0.442520
chr22	41092513	41092566	41092539	ENSG00000221160.1	+	miRNA	KNOWN	MIR1281	1	1	0.340736
chr22	41168217	41168316	41168266	ENSG00000252859.1	+	snRNA	KNOWN	RNU6-375P	1	1	0.494318
chr22	41169190	41183144	41176167	ENSG00000232754.1	-	antisense	KNOWN	RP1-85F18.6	1	3	0.619090
chr22	41174591	41197456	41186023	ENSG00000231993.1	-	antisense	KNOWN	EP300-AS1	1	3	0.648513
chr22	41189727	41190188	41189957	ENSG00000215771.2	-	processed_pseudogene	KNOWN	LRRC37A14P	1	1	0.654103
chr22	41205205	41231271	41218238	ENSG00000100395.14	+	protein_coding	KNOWN	L3MBTL2	9	18	0.940770
chr22	41209122	41217627	41213374	ENSG00000235513.1	-	antisense	KNOWN	RP4-756G23.5	2	3	0.952466
chr22	41229510	41240934	41235222	ENSG00000100399.15	-	protein_coding	KNOWN	CHADL	3	6	1.210568
chr22	41245611	41286251	41265931	ENSG00000100401.19	-	protein_coding	KNOWN	RANGAP1	7	17	1.125788
chr22	41252992	41253050	41253021	ENSG00000274552.1	-	miRNA	KNOWN	MIR6889	1	1	1.079986
chr22	41301522	41360147	41330834	ENSG00000100403.11	+	protein_coding	KNOWN	ZC3H7B	2	23	1.257789
chr22	41367333	41399326	41383329	ENSG00000167074.14	+	protein_coding	KNOWN	TEF	3	4	0.915470
chr22	41377177	41377283	41377230	ENSG00000199865.1	-	snRNA	KNOWN	RNU6-495P	1	1	0.979292
chr22	41430934	41431375	41431154	ENSG00000273424.1	+	lincRNA	KNOWN	CTA-223H9.9	1	1	0.924535
chr22	41433492	41447023	41440257	ENSG00000183864.4	-	protein_coding	KNOWN	TOB2	2	2	0.924535
chr22	41459717	41468725	41464221	ENSG00000100410.7	-	protein_coding	KNOWN	PHF5A	3	4	1.072626
chr22	41469125	41528989	41499057	ENSG00000100412.15	+	protein_coding	KNOWN	ACO2	7	18	0.854552
chr22	41525804	41544606	41535205	ENSG00000100413.16	-	protein_coding	KNOWN	POLR3H	9	7	1.091599
chr22	41560763	41577741	41569252	ENSG00000172346.14	+	protein_coding	KNOWN	CSDC2	2	4	1.004931
chr22	41576894	41589890	41583392	ENSG00000100417.11	-	protein_coding	KNOWN	PMM1	9	8	1.124596
chr22	41598028	41621096	41609562	ENSG00000100418.7	-	protein_coding	KNOWN	DESI1	4	6	0.861585
chr22	41621119	41664048	41642583	ENSG00000196419.12	+	protein_coding	KNOWN	XRCC6	8	13	0.752994
chr22	41648089	41648190	41648139	ENSG00000200332.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.900808
chr22	41673930	41690504	41682217	ENSG00000100138.13	-	protein_coding	KNOWN	SNU13	8	4	0.457896
chr22	41679711	41679817	41679764	ENSG00000207457.1	+	snRNA	KNOWN	RNU6-476P	1	1	0.441681
chr22	41688939	41698136	41693537	ENSG00000184208.10	+	protein_coding	KNOWN	C22orf46	2	3	0.912529
chr22	41699499	41799456	41749477	ENSG00000167077.12	+	protein_coding	KNOWN	MEI1	15	31	0.574057
chr22	41709225	41709489	41709357	ENSG00000231261.1	-	processed_pseudogene	KNOWN	HMGN2P10	1	1	0.973866
chr22	41722043	41722131	41722087	ENSG00000252603.1	-	snRNA	KNOWN	RNU6ATAC22P	1	1	0.410521
chr22	41747312	41747413	41747362	ENSG00000206813.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.465145
chr22	41800679	41826299	41813489	ENSG00000100147.13	+	protein_coding	KNOWN	CCDC134	2	7	0.603636
chr22	41831215	41834665	41832940	ENSG00000184068.2	-	antisense	KNOWN	RP5-821D11.7	1	2	0.573431
chr22	41833079	41907308	41870193	ENSG00000198911.11	+	protein_coding	KNOWN	SREBF2	9	22	0.593366
chr22	41900944	41901012	41900978	ENSG00000207932.1	+	miRNA	KNOWN	MIR33A	1	1	0.873991
chr22	41909554	41914667	41912110	ENSG00000234965.2	-	protein_coding	KNOWN	SHISA8	2	4	0.806579
chr22	41922023	41926818	41924420	ENSG00000159958.4	-	protein_coding	KNOWN	TNFRSF13C	1	3	0.800153
chr22	41923222	41923297	41923259	ENSG00000263463.1	-	miRNA	KNOWN	MIR378I	1	1	0.800153
chr22	41938721	41947164	41942942	ENSG00000100162.14	-	protein_coding	KNOWN	CENPM	8	6	0.902247
chr22	41952165	41958933	41955549	ENSG00000205704.6	+	unitary_pseudogene	KNOWN	LINC00634	2	2	0.896521
chr22	41976272	41998221	41987246	ENSG00000100167.19	+	protein_coding	KNOWN	SEPT3	6	11	0.718768
chr22	41981304	41982217	41981760	ENSG00000224883.1	-	antisense	KNOWN	CTA-250D10.19	1	3	0.705269
chr22	41998725	42058456	42028590	ENSG00000183066.14	+	protein_coding	KNOWN	WBP2NL	10	9	0.419488
chr22	42001069	42001966	42001517	ENSG00000215347.3	-	processed_pseudogene	KNOWN	SLC25A5P1	1	1	0.741305
chr22	42058354	42070842	42064598	ENSG00000198951.11	-	protein_coding	KNOWN	NAGA	3	10	0.172616
chr22	42074251	42079441	42076846	ENSG00000177096.8	+	protein_coding	KNOWN	FAM109B	2	3	0.947602
chr22	42076058	42076161	42076109	ENSG00000238498.1	-	snoRNA	KNOWN	SNORD13P1	1	1	0.947602
chr22	42079691	42084284	42081987	ENSG00000183172.8	+	protein_coding	KNOWN	SMDT1	3	3	0.947602
chr22	42085525	42090955	42088240	ENSG00000184983.9	-	protein_coding	KNOWN	NDUFA6	4	3	0.882015
chr22	42089630	42090028	42089829	ENSG00000270083.1	-	sense_intronic	KNOWN	RP1-257I20.14	1	1	0.920458
chr22	42090931	42137742	42114336	ENSG00000237037.9	+	processed_transcript	KNOWN	NDUFA6-AS1	16	8	0.607866
chr22	42107765	42108953	42108359	ENSG00000213790.2	-	processed_pseudogene	KNOWN	OLA1P1	1	1	0.575075
chr22	42126499	42130906	42128702	ENSG00000100197.20	-	protein_coding	KNOWN	CYP2D6	5	10	0.579410
chr22	42132543	42132998	42132770	ENSG00000227370.1	+	processed_pseudogene	KNOWN	RP4-669P10.19	1	1	1.132007
chr22	42136433	42139927	42138180	ENSG00000232710.1	-	lincRNA	KNOWN	RP4-669P10.16	1	3	1.132007
chr22	42138060	42139726	42138893	ENSG00000281538.1	+	lincRNA	KNOWN	RP4-669P10.20	1	2	1.132007
chr22	42140203	42144577	42142390	ENSG00000205702.10	-	polymorphic_pseudogene	KNOWN	CYP2D7	8	11	1.132007
chr22	42149886	42155001	42152443	ENSG00000226450.2	-	unprocessed_pseudogene	KNOWN	CYP2D8P	1	9	1.039448
chr22	42160013	42343616	42251814	ENSG00000100207.18	-	protein_coding	KNOWN	TCF20	4	5	0.570581
chr22	42269753	42275196	42272474	ENSG00000182057.4	+	lincRNA	KNOWN	OGFRP1	3	4	0.552819
chr22	42276355	42277052	42276703	ENSG00000233903.2	+	lincRNA	KNOWN	Z83851.4	1	2	0.562783
chr22	42278188	42278846	42278517	ENSG00000273366.1	+	lincRNA	KNOWN	CTA-989H11.1	1	1	0.562783
chr22	42364400	42369236	42366818	ENSG00000229891.1	-	lincRNA	KNOWN	LINC01315	3	2	0.768154
chr22	42380410	42432395	42406402	ENSG00000235568.6	-	protein_coding	KNOWN	NFAM1	2	6	0.864612
chr22	42438023	42446195	42442109	ENSG00000230107.1	+	lincRNA	KNOWN	CTA-126B4.7	1	4	0.933088
chr22	42500579	42512560	42506569	ENSG00000172250.14	+	processed_transcript	KNOWN	SERHL	3	11	0.639376
chr22	42509968	42519802	42514885	ENSG00000189306.10	-	protein_coding	KNOWN	RRP7A	3	7	0.840084
chr22	42552188	42552273	42552230	ENSG00000265106.1	-	miRNA	NOVEL	Z93241.1	1	1	0.818479
chr22	42553617	42574382	42563999	ENSG00000183569.17	+	protein_coding	KNOWN	SERHL2	10	12	0.826261
chr22	42555223	42582038	42568630	ENSG00000182841.12	-	transcribed_unprocessed_pseudogene	KNOWN	RRP7BP	5	8	0.835032
chr22	42565048	42565330	42565189	ENSG00000202058.1	-	misc_RNA	KNOWN	RN7SKP80	1	1	0.818479
chr22	42569147	42569250	42569198	ENSG00000251913.1	-	snRNA	KNOWN	RNU6-513P	1	1	0.818479
chr22	42583721	42614962	42599341	ENSG00000100227.17	-	protein_coding	KNOWN	POLDIP3	9	9	0.788794
chr22	42615244	42615393	42615318	ENSG00000276027.1	+	snRNA	KNOWN	RNU12	1	1	0.990940
chr22	42615244	42615907	42615575	ENSG00000270022.3	+	lincRNA	KNOWN	RNU12	1	1	0.990940
chr22	42617840	42649568	42633704	ENSG00000100243.20	-	protein_coding	KNOWN	CYB5R3	8	10	1.092080
chr22	42639803	42640601	42640202	ENSG00000249222.1	-	protein_coding	KNOWN	ATP5L2	1	1	1.154923
chr22	42692121	42721298	42706709	ENSG00000128274.15	-	protein_coding	KNOWN	A4GALT	5	2	1.072413
chr22	42762860	42762959	42762909	ENSG00000200448.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.012375
chr22	42776406	42777296	42776851	ENSG00000234009.1	-	processed_pseudogene	KNOWN	RPL5P34	1	1	0.695849
chr22	42784462	42787100	42785781	ENSG00000229608.1	+	unprocessed_pseudogene	KNOWN	GOLGA2P4	1	7	0.695849
chr22	42791814	42794313	42793063	ENSG00000274717.1	-	processed_pseudogene	KNOWN	RP1-47A17.1	1	3	1.042410
chr22	42796502	42858106	42827304	ENSG00000242247.10	-	protein_coding	KNOWN	ARFGAP3	6	16	0.625383
chr22	42835412	43015145	42925278	ENSG00000100266.18	-	protein_coding	KNOWN	PACSIN2	12	11	0.665299
chr22	42853403	42853799	42853601	ENSG00000226989.1	-	processed_pseudogene	KNOWN	AL049758.2	1	1	0.667494
chr22	43038585	43052366	43045475	ENSG00000230319.1	+	antisense	KNOWN	AL022476.2	1	3	0.770922
chr22	43039644	43089428	43064536	ENSG00000100271.16	-	protein_coding	KNOWN	TTLL1	4	12	0.677777
chr22	43092167	43092524	43092345	ENSG00000234735.1	+	processed_pseudogene	KNOWN	AL022237.3	1	1	0.782036
chr22	43110748	43129712	43120230	ENSG00000100290.2	+	protein_coding	KNOWN	BIK	1	5	0.479015
chr22	43132206	43143394	43137800	ENSG00000100294.12	-	protein_coding	KNOWN	MCAT	4	4	0.715137
chr22	43151514	43163242	43157378	ENSG00000100300.17	+	protein_coding	KNOWN	TSPO	6	4	0.877253
chr22	43166622	43187133	43176877	ENSG00000100304.12	-	protein_coding	KNOWN	TTLL12	4	14	0.562778
chr22	43197283	43343388	43270335	ENSG00000159307.18	-	protein_coding	KNOWN	SCUBE1	8	22	0.468620
chr22	43212674	43213661	43213167	ENSG00000236272.1	+	antisense	KNOWN	Z82214.3	1	2	0.501200
chr22	43232141	43239010	43235575	ENSG00000234892.1	+	antisense	KNOWN	Z82214.2	1	3	0.647428
chr22	43275955	43283830	43279892	ENSG00000203527.2	+	antisense	KNOWN	Z99756.1	1	2	0.735199
chr22	43400331	43409681	43405006	ENSG00000236117.1	+	lincRNA	KNOWN	RP4-754E20__A.5	1	4	0.632042
chr22	43411196	43507848	43459522	ENSG00000186732.13	+	protein_coding	KNOWN	MPPED1	6	7	0.264162
chr22	43516107	43537117	43526612	ENSG00000223843.4	+	antisense	KNOWN	EFCAB6-AS1	1	3	0.207560
chr22	43528744	43812337	43670540	ENSG00000186976.14	-	protein_coding	KNOWN	EFCAB6	10	32	-0.124221
chr22	43759199	43759910	43759554	ENSG00000233157.1	-	processed_pseudogene	KNOWN	RP3-388M5.8	1	1	-0.124432
chr22	43802544	43802772	43802658	ENSG00000180150.5	+	processed_pseudogene	KNOWN	HMGN2P9	1	1	-0.029314
chr22	43812456	43817394	43814925	ENSG00000261251.1	+	antisense	KNOWN	RP3-388M5.9	2	2	-0.103673
chr22	43824509	43862503	43843506	ENSG00000130540.13	-	protein_coding	KNOWN	SULT4A1	4	8	0.362368
chr22	43879678	43892013	43885845	ENSG00000100341.11	-	protein_coding	KNOWN	PNPLA5	5	9	0.151032
chr22	43904596	43904681	43904638	ENSG00000266837.1	-	miRNA	NOVEL	Z97055.1	1	1	0.370048
chr22	43923739	43964488	43944113	ENSG00000100344.10	+	protein_coding	KNOWN	PNPLA3	5	10	0.570736
chr22	43955421	44010531	43982976	ENSG00000100347.14	+	protein_coding	KNOWN	SAMM50	6	15	0.402379
chr22	43957027	43957348	43957187	ENSG00000224856.2	+	processed_pseudogene	KNOWN	RP4-796I17.5	1	1	0.487577
chr22	43999211	44172949	44086080	ENSG00000188677.14	+	protein_coding	KNOWN	PARVB	10	14	0.496063
chr22	44102779	44116232	44109505	ENSG00000279175.1	+	sense_intronic	KNOWN	CTA-414D7.1	1	1	0.553350
chr22	44139365	44153626	44146495	ENSG00000280434.1	+	sense_overlapping	KNOWN	RP4-671O14.6	1	1	0.451758
chr22	44172956	44219533	44196244	ENSG00000138964.16	+	protein_coding	KNOWN	PARVG	12	14	0.384513
chr22	44183031	44187739	44185385	ENSG00000279933.1	-	TEC	KNOWN	RP4-671O14.5	1	1	0.467859
chr22	44210442	44229512	44219977	ENSG00000280011.1	-	antisense	KNOWN	RP4-671O14.7	1	1	0.404779
chr22	44243667	44312851	44278259	ENSG00000138944.7	-	protein_coding	KNOWN	KIAA1644	1	5	0.378730
chr22	44365551	44366284	44365917	ENSG00000220702.1	+	lincRNA	KNOWN	RP1-32I10.10	1	2	0.657971
chr22	44413485	44414814	44414149	ENSG00000236079.1	-	processed_pseudogene	KNOWN	RP1-32I10.11	1	2	0.582317
chr22	44443327	44444788	44444057	ENSG00000232655.1	+	lincRNA	KNOWN	CTA-397C4.2	1	3	0.355026
chr22	44483495	44483717	44483606	ENSG00000228807.1	-	processed_pseudogene	KNOWN	MRPS18CP6	1	1	0.141745
chr22	44486295	44486914	44486604	ENSG00000279642.1	-	TEC	KNOWN	RP5-1033E15.3	1	1	0.141745
chr22	44492572	44498298	44495435	ENSG00000188636.3	-	protein_coding	KNOWN	LDOC1L	1	2	0.664881
chr22	44566965	44568247	44567606	ENSG00000215333.3	+	processed_pseudogene	KNOWN	KRT18P23	1	1	0.381498
chr22	44569339	44572341	44570840	ENSG00000187012.10	+	lincRNA	KNOWN	LINC00207	4	5	0.416330
chr22	44606939	44625419	44616179	ENSG00000234300.1	-	lincRNA	KNOWN	LINC00229	1	4	0.524476
chr22	44651835	44652379	44652107	ENSG00000231801.2	+	processed_pseudogene	KNOWN	ANP32BP2	1	1	0.348685
chr22	44668547	44737681	44703114	ENSG00000186654.20	+	protein_coding	KNOWN	PRR5	18	10	0.723962
chr22	44702233	44862706	44782469	ENSG00000248405.10	+	protein_coding	KNOWN	PRR5-ARHGAP8	4	17	0.456226
chr22	44752558	44862788	44807673	ENSG00000241484.9	+	protein_coding	KNOWN	ARHGAP8	12	13	0.302628
chr22	44881162	45009999	44945580	ENSG00000056487.15	-	protein_coding	KNOWN	PHF21B	12	14	0.314656
chr22	44901547	44902471	44902009	ENSG00000223730.1	+	transcribed_processed_pseudogene	KNOWN	RP1-127B20.4	2	1	0.352381
chr22	45000565	45003619	45002092	ENSG00000230922.1	-	sense_intronic	KNOWN	RP4-753M9.1	1	3	0.327281
chr22	45133020	45163781	45148400	ENSG00000226328.6	-	lincRNA	KNOWN	NUP50-AS1	3	3	0.007314
chr22	45155539	45156011	45155775	ENSG00000273243.1	-	lincRNA	KNOWN	CTA-217C2.2	1	1	-0.057064
chr22	45163841	45188015	45175928	ENSG00000093000.18	+	protein_coding	KNOWN	NUP50	19	9	0.165540
chr22	45178990	45179310	45179150	ENSG00000273353.1	+	sense_intronic	KNOWN	CTA-268H5.12	1	1	0.241628
chr22	45190338	45240769	45215553	ENSG00000100364.18	-	protein_coding	KNOWN	KIAA0930	16	10	0.818686
chr22	45200938	45201049	45200993	ENSG00000221598.2	-	miRNA	KNOWN	MIR1249	1	1	0.528466
chr22	45262273	45263585	45262929	ENSG00000273287.2	-	lincRNA	KNOWN	CTA-268H5.14	1	1	0.685367
chr22	45275599	45276085	45275842	ENSG00000213752.3	+	processed_pseudogene	KNOWN	CTA-268H5.9	1	1	0.475320
chr22	45284982	45295874	45290428	ENSG00000100373.9	+	protein_coding	KNOWN	UPK3A	2	6	0.480169
chr22	45308968	45341955	45325461	ENSG00000100376.11	+	protein_coding	KNOWN	FAM118A	16	10	0.469893
chr22	45344063	45413619	45378841	ENSG00000077935.16	-	protein_coding	KNOWN	SMC1B	2	25	0.177315
chr22	45413691	45432496	45423093	ENSG00000128408.8	+	protein_coding	KNOWN	RIBC2	3	7	0.413873
chr22	45435864	45448743	45442303	ENSG00000232363.1	-	antisense	KNOWN	RP1-102D24.5	1	2	0.817027
chr22	45502238	45601135	45551686	ENSG00000077942.18	+	protein_coding	KNOWN	FBLN1	18	17	0.828847
chr22	45604432	45605621	45605026	ENSG00000238120.1	-	antisense	KNOWN	LINC01589	1	2	0.726707
chr22	45624531	45624632	45624581	ENSG00000251985.1	-	snRNA	KNOWN	RNU6-1161P	1	1	0.566811
chr22	45657019	45680130	45668574	ENSG00000280383.1	+	sense_overlapping	KNOWN	CTA-941F9.10	1	1	0.462147
chr22	45671798	45845307	45758552	ENSG00000130638.15	+	protein_coding	KNOWN	ATXN10	11	12	0.349477
chr22	45760524	45760598	45760561	ENSG00000264160.1	+	miRNA	KNOWN	MIR4762	1	1	0.463175
chr22	45792418	45793636	45793027	ENSG00000235347.1	-	processed_pseudogene	KNOWN	RP1-37M3.8	1	1	0.276416
chr22	45875932	45879247	45877589	ENSG00000279954.1	+	antisense	KNOWN	WI2-85898F10.2	1	1	0.615554
chr22	45875999	45887748	45881873	ENSG00000235091.1	-	lincRNA	KNOWN	WI2-85898F10.1	1	3	0.615554
chr22	45920362	45977129	45948745	ENSG00000188064.9	-	protein_coding	KNOWN	WNT7B	5	4	0.878463
chr22	45976878	45976954	45976916	ENSG00000265610.1	-	miRNA	NOVEL	CR536603.1	1	1	1.091992
chr22	46006616	46010777	46008696	ENSG00000280424.1	+	TEC	KNOWN	CITF22-92A6.2	1	1	0.997776
chr22	46013606	46015498	46014552	ENSG00000273145.1	+	lincRNA	KNOWN	CITF22-92A6.1	1	2	0.983680
chr22	46039907	46044853	46042380	ENSG00000231711.2	-	processed_transcript	KNOWN	LINC00899	3	4	0.545450
chr22	46049478	46054144	46051811	ENSG00000182257.6	-	protein_coding	KNOWN	PRR34	1	2	0.814075
chr22	46053093	46053560	46053326	ENSG00000273289.1	+	antisense	KNOWN	RP6-109B7.5	1	1	0.847839
chr22	46053705	46057210	46055457	ENSG00000241990.5	+	antisense	KNOWN	PRR34-AS1	3	4	0.847839
chr22	46053869	46113928	46083898	ENSG00000197182.12	+	lincRNA	KNOWN	MIRLET7BHG	4	6	0.839397
chr22	46055740	46058160	46056950	ENSG00000231010.1	-	lincRNA	KNOWN	RP6-109B7.2	1	2	0.847839
chr22	46067356	46069891	46068623	ENSG00000235159.1	-	lincRNA	KNOWN	RP6-109B7.4	1	3	0.847839
chr22	46091044	46091126	46091085	ENSG00000266533.1	+	miRNA	KNOWN	MIR3619	1	1	1.017991
chr22	46112732	46112840	46112786	ENSG00000198986.2	+	miRNA	KNOWN	MIRLET7A3	1	1	1.059387
chr22	46113566	46113657	46113611	ENSG00000264147.1	+	miRNA	KNOWN	MIR4763	1	1	1.059387
chr22	46113686	46113768	46113727	ENSG00000207875.1	+	miRNA	KNOWN	MIRLET7B	1	1	1.059387
chr22	46150521	46243756	46197138	ENSG00000186951.16	+	protein_coding	KNOWN	PPARA	12	8	0.521749
chr22	46163303	46165347	46164325	ENSG00000280384.1	+	sense_intronic	KNOWN	RP4-695O20.1	1	1	0.823398
chr22	46244011	46250679	46247345	ENSG00000205643.10	-	protein_coding	KNOWN	CDPF1	6	5	0.544794
chr22	46255663	46263355	46259509	ENSG00000130943.6	-	protein_coding	KNOWN	PKDREJ	1	1	0.644893
chr22	46267961	46294008	46280984	ENSG00000075234.16	+	protein_coding	KNOWN	TTC38	7	14	0.809410
chr22	46295143	46296660	46295901	ENSG00000277232.2	-	lincRNA	KNOWN	GTSE1-AS1	2	1	0.910545
chr22	46296741	46330810	46313775	ENSG00000075218.18	+	protein_coding	KNOWN	GTSE1	4	12	0.748591
chr22	46330875	46357340	46344107	ENSG00000100416.12	+	protein_coding	KNOWN	TRMU	18	11	0.771584
chr22	46360834	46537170	46449002	ENSG00000075275.16	-	protein_coding	KNOWN	CELSR1	5	35	0.730526
chr22	46481329	46481760	46481544	ENSG00000230634.1	-	processed_pseudogene	KNOWN	RP5-996D20.3	1	1	0.787658
chr22	46541495	46548196	46544845	ENSG00000234869.1	+	antisense	KNOWN	RP3-439F8.1	1	2	0.731402
chr22	46576012	46679790	46627901	ENSG00000075240.16	+	protein_coding	KNOWN	GRAMD4	7	19	0.762597
chr22	46684411	46738261	46711336	ENSG00000100422.13	-	protein_coding	KNOWN	CERK	4	13	0.753649
chr22	46761894	46762563	46762228	ENSG00000260708.1	-	antisense	KNOWN	CTA-29F11.1	1	1	0.758865
chr22	46762617	47175699	46969158	ENSG00000054611.13	+	protein_coding	KNOWN	TBC1D22A	11	14	0.379580
chr22	46915328	46915908	46915618	ENSG00000280080.1	-	protein_coding	KNOWN	U51561.1	1	1	0.356298
chr22	47115838	47117217	47116527	ENSG00000278881.1	-	protein_coding	KNOWN	FP325331.1	1	1	0.390073
chr22	47259366	47261007	47260186	ENSG00000280312.1	+	TEC	KNOWN	RP1-111J24.1	1	1	-0.108995
chr22	47345569	47373541	47359555	ENSG00000224715.1	+	lincRNA	KNOWN	CITF22-49D8.1	1	4	0.232868
chr22	47461299	47487111	47474205	ENSG00000218357.3	-	lincRNA	KNOWN	LL22NC03-75H12.2	2	3	-0.142218
chr22	47621043	47631569	47626306	ENSG00000205634.6	-	lincRNA	KNOWN	LINC00898	3	6	-0.044171
chr22	47631674	47855600	47743637	ENSG00000224271.5	+	lincRNA	KNOWN	RP11-191L9.4	3	9	-0.045966
chr22	47662559	47663603	47663081	ENSG00000232897.2	-	processed_pseudogene	KNOWN	RP11-191L9.5	1	2	-0.144448
chr22	47860671	47862062	47861366	ENSG00000230345.1	+	lincRNA	KNOWN	RP13-455A7.1	1	2	-0.139334
chr22	47916728	47926264	47921496	ENSG00000279712.1	+	lincRNA	KNOWN	CTA-280A3.2	1	1	0.038880
chr22	48044710	48048549	48046629	ENSG00000235154.1	-	lincRNA	KNOWN	CTA-280A3__B.2	1	2	-0.059126
chr22	48052646	48058275	48055460	ENSG00000278890.1	+	lincRNA	KNOWN	LL22NC03-27C5.1	1	1	0.055280
chr22	48139461	48141001	48140231	ENSG00000238192.1	-	lincRNA	KNOWN	LL22NC03-121E8.4	1	2	-0.353419
chr22	48141542	48143229	48142385	ENSG00000229275.1	+	lincRNA	KNOWN	LL22NC03-121E8.3	1	4	-0.353419
chr22	48274364	48274415	48274389	ENSG00000266508.1	+	miRNA	KNOWN	MIR3201	1	1	0.126100
chr22	48448890	48451217	48450053	ENSG00000233179.1	+	lincRNA	KNOWN	RP11-536P6.3	1	2	0.046525
chr22	48489460	48850912	48670186	ENSG00000219438.8	+	protein_coding	KNOWN	FAM19A5	5	4	0.302813
chr22	48538900	48547387	48543143	ENSG00000281732.1	-	processed_transcript	KNOWN	CTA-299D3.8	3	5	0.510882
chr22	48780295	48780353	48780324	ENSG00000266887.1	+	miRNA	KNOWN	MIR4535	1	1	-0.299199
chr22	48814320	48814404	48814362	ENSG00000251912.1	-	miRNA	NOVEL	AL954742.1	1	1	0.274052
chr22	48866770	48898386	48882578	ENSG00000205632.3	+	lincRNA	KNOWN	LINC01310	1	7	0.164411
chr22	49213911	49214247	49214079	ENSG00000226142.2	-	processed_pseudogene	KNOWN	RPL35P8	1	1	0.126425
chr22	49264201	49266080	49265140	ENSG00000280199.1	+	lincRNA	KNOWN	RP1-34P24.3	1	1	-0.018062
chr22	49414524	49657542	49536033	ENSG00000188511.12	-	lincRNA	KNOWN	C22orf34	7	5	0.208288
chr22	49500568	49501585	49501076	ENSG00000280224.1	+	lincRNA	KNOWN	CTA-722E9.1	1	1	0.158081
chr22	49534062	49534926	49534494	ENSG00000279597.1	+	lincRNA	KNOWN	RP4-566L20.1	1	1	0.332456
chr22	49543393	49543466	49543429	ENSG00000264139.1	-	miRNA	KNOWN	MIR3667	1	1	0.332456
chr22	49548681	49556473	49552577	ENSG00000212939.2	+	lincRNA	KNOWN	RP1-29C18.10	1	2	0.257084
chr22	49572264	49575426	49573845	ENSG00000213279.2	-	lincRNA	KNOWN	RP1-29C18.9	1	2	0.261050
chr22	49612657	49615716	49614186	ENSG00000235111.1	-	sense_intronic	KNOWN	RP1-29C18.8	1	2	0.337358
chr22	49718053	49724506	49721279	ENSG00000226954.1	-	lincRNA	KNOWN	RP5-983L19.2	1	2	0.365010
chr22	49738677	49739003	49738840	ENSG00000223142.1	+	misc_RNA	KNOWN	RN7SKP252	1	1	0.325306
chr22	49757627	49758980	49758303	ENSG00000214727.2	-	unprocessed_pseudogene	KNOWN	RPL5P35	1	3	0.444565
chr22	49773283	49827512	49800397	ENSG00000100425.18	-	protein_coding	KNOWN	BRD1	8	13	0.738389
chr22	49805452	49807208	49806330	ENSG00000279345.1	+	antisense	KNOWN	RP3-522J7.7	1	1	0.875988
chr22	49817248	49817712	49817480	ENSG00000236867.1	+	processed_pseudogene	KNOWN	RP3-522J7.5	1	1	0.669049
chr22	49832616	49837786	49835201	ENSG00000260613.1	-	lincRNA	KNOWN	RP3-522J7.6	1	2	1.019141
chr22	49845929	49846090	49846009	ENSG00000229409.1	+	processed_pseudogene	KNOWN	RP11-494O16.3	1	1	1.019141
chr22	49846456	49846720	49846588	ENSG00000277771.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.019141
chr22	49851425	49853364	49852394	ENSG00000279494.1	+	lincRNA	KNOWN	RP11-494O16.4	1	1	0.653871
chr22	49853842	49890078	49871960	ENSG00000100426.6	+	protein_coding	KNOWN	ZBED4	1	2	0.590997
chr22	49878999	49879242	49879120	ENSG00000280567.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.539451
chr22	49900229	49918458	49909343	ENSG00000182858.13	-	protein_coding	KNOWN	ALG12	3	10	0.863438
chr22	49902228	49904576	49903402	ENSG00000273192.1	+	lincRNA	KNOWN	CITF22-1A6.3	1	1	0.781652
chr22	49918167	49927540	49922853	ENSG00000184164.14	+	protein_coding	KNOWN	CRELD2	11	11	0.957899
chr22	49933198	49934074	49933636	ENSG00000278869.1	-	lincRNA	KNOWN	CITF22-49E9.3	1	1	1.132069
chr22	49960513	49964080	49962296	ENSG00000198355.4	+	protein_coding	KNOWN	PIM3	2	6	1.189839
chr22	49962866	49962939	49962902	ENSG00000276753.1	+	miRNA	KNOWN	MIR6821	1	1	1.189839
chr22	49994513	50012659	50003586	ENSG00000188263.10	-	protein_coding	KNOWN	IL17REL	2	15	1.031210
chr22	50015123	50056935	50036029	ENSG00000138892.11	-	protein_coding	KNOWN	TTLL8	3	14	0.919708
chr22	50059391	50085902	50072646	ENSG00000100427.15	-	protein_coding	KNOWN	MLC1	5	12	0.986779
chr22	50089879	50161690	50125784	ENSG00000073146.15	+	protein_coding	KNOWN	MOV10L1	10	28	0.861253
chr22	50092745	50096437	50094591	ENSG00000280395.1	+	sense_overlapping	KNOWN	RP5-898I4.1	1	1	0.918189
chr22	50170731	50180294	50175512	ENSG00000073150.13	+	protein_coding	KNOWN	PANX2	3	5	1.181629
chr22	50185915	50199598	50192756	ENSG00000170638.9	+	protein_coding	KNOWN	TRABD	6	10	1.476213
chr22	50191724	50192402	50192063	ENSG00000273188.1	-	antisense	KNOWN	RP3-402G11.25	1	1	1.601547
chr22	50199090	50200837	50199963	ENSG00000273253.2	-	antisense	KNOWN	RP3-402G11.26	1	2	1.601547
chr22	50200979	50217616	50209297	ENSG00000073169.13	+	protein_coding	KNOWN	SELO	3	10	1.431575
chr22	50205585	50206062	50205823	ENSG00000272836.1	-	antisense	KNOWN	RP3-402G11.27	1	1	1.601547
chr22	50208461	50209542	50209001	ENSG00000273137.1	-	antisense	KNOWN	RP3-402G11.28	1	2	1.601547
chr22	50217689	50244992	50231340	ENSG00000128159.11	-	protein_coding	KNOWN	TUBGCP6	8	25	1.367030
chr22	50245183	50251405	50248294	ENSG00000100429.17	-	protein_coding	KNOWN	HDAC10	22	20	1.481978
chr22	50245450	50261825	50253637	ENSG00000188130.13	-	protein_coding	KNOWN	MAPK12	11	26	1.487866
chr22	50263713	50270767	50267240	ENSG00000185386.14	-	protein_coding	KNOWN	MAPK11	4	13	1.489128
chr22	50274979	50307627	50291303	ENSG00000196576.14	-	protein_coding	KNOWN	PLXNB2	14	37	1.535875
chr22	50309030	50327060	50318045	ENSG00000205593.11	-	protein_coding	KNOWN	DENND6B	5	20	1.796054
chr22	50314631	50316008	50315319	ENSG00000227484.1	+	antisense	KNOWN	XX-C283C717.1	1	2	1.807763
chr22	50316035	50317025	50316530	ENSG00000279182.1	+	antisense	KNOWN	XX-C00717C00720L.1	1	1	1.807763
chr22	50343304	50445090	50394197	ENSG00000100239.15	+	protein_coding	KNOWN	PPP6R2	9	25	1.239215
chr22	50371210	50371496	50371353	ENSG00000242463.3	+	misc_RNA	KNOWN	RN7SL500P	1	1	1.014237
chr22	50398820	50398920	50398870	ENSG00000238604.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.427412
chr22	50445000	50475024	50460012	ENSG00000100241.20	-	protein_coding	KNOWN	SBF1	8	41	1.435927
chr22	50481556	50486440	50483998	ENSG00000128165.8	+	protein_coding	KNOWN	ADM2	2	3	1.554027
chr22	50486784	50490648	50488716	ENSG00000100253.12	+	protein_coding	KNOWN	MIOX	4	10	1.502567
chr22	50502949	50507691	50505320	ENSG00000100258.17	-	protein_coding	KNOWN	LMF2	6	14	1.247643
chr22	50508216	50523472	50515844	ENSG00000025770.18	+	protein_coding	KNOWN	NCAPH2	10	20	1.290038
chr22	50523568	50526439	50525003	ENSG00000130489.12	-	protein_coding	KNOWN	SCO2	6	2	1.295648
chr22	50523926	50524780	50524353	ENSG00000272821.1	+	antisense	KNOWN	CTA-384D8.36	1	1	1.295648
chr22	50525752	50530056	50527904	ENSG00000025708.13	-	protein_coding	KNOWN	TYMP	8	10	1.296752
chr22	50529710	50532580	50531145	ENSG00000177989.13	-	protein_coding	KNOWN	ODF3B	9	7	1.370626
chr22	50542305	50542906	50542605	ENSG00000272666.1	-	lincRNA	KNOWN	CTA-384D8.35	1	1	1.379022
chr22	50542650	50543011	50542830	ENSG00000273272.1	+	lincRNA	KNOWN	CTA-384D8.34	1	1	1.379022
chr22	50546415	50547652	50547033	ENSG00000226738.1	+	antisense	KNOWN	CTA-384D8.31	1	2	1.379022
chr22	50548033	50551023	50549528	ENSG00000130487.5	+	protein_coding	KNOWN	KLHDC7B	1	1	1.274769
chr22	50551112	50562905	50557008	ENSG00000217442.3	-	protein_coding	KNOWN	SYCE3	2	3	1.074610
chr22	50568861	50578465	50573663	ENSG00000205560.12	-	protein_coding	KNOWN	CPT1B	13	20	1.089932
chr22	50568869	50582965	50575917	ENSG00000254413.8	-	protein_coding	KNOWN	CHKB-CPT1B	3	27	1.090599
chr22	50578949	50601455	50590202	ENSG00000100288.19	-	protein_coding	KNOWN	CHKB	12	11	1.071932
chr22	50583026	50583877	50583451	ENSG00000205559.3	+	antisense	KNOWN	CHKB-AS1	1	2	1.091992
chr22	50597152	50597599	50597375	ENSG00000272940.1	+	lincRNA	KNOWN	CTA-384D8.33	1	1	1.052583
chr22	50600685	50613981	50607333	ENSG00000008735.13	+	protein_coding	KNOWN	MAPK8IP2	2	12	1.067078
chr22	50622754	50628173	50625463	ENSG00000100299.17	-	protein_coding	KNOWN	ARSA	8	9	1.100981
chr22	50669804	50669901	50669852	ENSG00000212569.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.777883
chr22	50674415	50733298	50703856	ENSG00000251322.7	+	protein_coding	KNOWN	SHANK3	3	25	0.956089
chr22	50691260	50691363	50691311	ENSG00000206841.1	-	snRNA	KNOWN	RNU6-409P	1	1	1.110026
chr22	50735825	50738139	50736982	ENSG00000225929.1	-	antisense	KNOWN	AC000036.4	1	2	1.010023
chr22	50738196	50745334	50741765	ENSG00000100312.10	+	protein_coding	KNOWN	ACR	4	5	1.010023
chr22	50740593	50743520	50742056	ENSG00000254499.1	-	antisense	KNOWN	AC002056.5	1	2	1.010023
chr22	50754675	50755434	50755054	ENSG00000213683.4	-	processed_pseudogene	KNOWN	AC002056.3	1	1	0.493888
chr22	50756948	50801309	50779128	ENSG00000184319.15	+	transcribed_unprocessed_pseudogene	KNOWN	RPL23AP82	8	4	0.424260
chr22	50767501	50783663	50775582	ENSG00000079974.17	-	protein_coding	KNOWN	RABL2B	15	10	0.421916
chr22_KI270731v1_random	10598	13001	11799	ENSG00000278633.1	-	protein_coding	NOVEL	AC023491.2	1	1	NA
chr22_KI270731v1_random	26533	27138	26835	ENSG00000278066.1	-	pseudogene	NOVEL	AC023491.1	1	2	NA
chr22_KI270733v1_random	117447	117524	117485	ENSG00000276330.1	+	miRNA	NOVEL	AL353644.7	1	1	NA
chr22_KI270733v1_random	121581	121672	121626	ENSG00000274411.1	+	miRNA	KNOWN	hsa-mir-6724-1	1	1	NA
chr22_KI270733v1_random	122136	122225	122180	ENSG00000273739.1	+	misc_RNA	NOVEL	pRNA	1	1	NA
chr22_KI270733v1_random	124297	124410	124353	ENSG00000275684.1	+	miRNA	NOVEL	AL353644.5	1	1	NA
chr22_KI270733v1_random	124758	124937	124847	ENSG00000276112.1	+	miRNA	NOVEL	AL353644.6	1	1	NA
chr22_KI270733v1_random	125129	125189	125159	ENSG00000277928.1	+	miRNA	KNOWN	hsa-mir-3687-1	1	1	NA
chr22_KI270733v1_random	128877	129029	128953	ENSG00000276700.1	+	rRNA	KNOWN	RNA5-8S5	1	1	NA
chr22_KI270733v1_random	131007	131098	131052	ENSG00000277765.1	+	miRNA	NOVEL	AL353644.11	1	1	NA
chr22_KI270733v1_random	134291	134339	134315	ENSG00000276402.1	+	miRNA	NOVEL	AL353644.8	1	1	NA
chr22_KI270733v1_random	135060	135116	135088	ENSG00000277048.1	+	miRNA	NOVEL	AL353644.10	1	1	NA
chr22_KI270733v1_random	166663	166754	166708	ENSG00000274745.1	+	miRNA	NOVEL	AL353644.2	1	1	NA
chr22_KI270733v1_random	167218	167307	167262	ENSG00000276312.1	+	misc_RNA	NOVEL	pRNA	1	1	NA
chr22_KI270733v1_random	169383	169496	169439	ENSG00000276936.1	+	miRNA	NOVEL	AL353644.9	1	1	NA
chr22_KI270733v1_random	169844	170023	169933	ENSG00000275104.1	+	miRNA	NOVEL	AL353644.4	1	1	NA
chr22_KI270733v1_random	170215	170275	170245	ENSG00000274016.1	+	miRNA	KNOWN	hsa-mir-3687-1	1	1	NA
chr22_KI270733v1_random	173956	174108	174032	ENSG00000275757.1	+	rRNA	KNOWN	RNA5-8S5	1	1	NA
chr22_KI270733v1_random	176086	176177	176131	ENSG00000274804.1	+	miRNA	NOVEL	AL353644.3	1	1	NA
chr22_KI270733v1_random	179370	179418	179394	ENSG00000274224.1	+	miRNA	NOVEL	AL353644.1	1	1	NA
chr22_KI270734v1_random	59711	60316	60013	ENSG00000278573.1	+	pseudogene	NOVEL	AC007325.3	1	2	NA
chr22_KI270734v1_random	72411	74814	73612	ENSG00000276017.1	+	protein_coding	NOVEL	AC007325.1	1	1	NA
chr22_KI270734v1_random	131494	137392	134443	ENSG00000278817.1	+	protein_coding	KNOWN	AC007325.4	1	5	NA
chr22_KI270734v1_random	138082	161852	149967	ENSG00000277196.4	-	protein_coding	NOVEL	AC007325.2	2	15	NA
chr3	23757	24501	24129	ENSG00000223587.1	+	lincRNA	KNOWN	AY269186.1	1	2	-0.200790
chr3	53348	54346	53847	ENSG00000224918.1	-	lincRNA	KNOWN	AY269186.2	1	2	-0.054494
chr3	195758	197341	196549	ENSG00000224318.5	-	processed_transcript	KNOWN	CHL1-AS2	3	5	-0.541065
chr3	196596	409417	303006	ENSG00000134121.9	+	protein_coding	KNOWN	CHL1	16	28	-0.414808
chr3	282689	282792	282740	ENSG00000252017.1	-	snRNA	KNOWN	RNU6-1194P	1	1	0.074504
chr3	308714	309322	309018	ENSG00000231660.1	-	processed_pseudogene	KNOWN	RPS8P6	1	1	-0.504466
chr3	363370	385795	374582	ENSG00000234661.2	-	antisense	KNOWN	CHL1-AS1	2	3	-0.339070
chr3	536231	846015	691123	ENSG00000224957.5	+	lincRNA	KNOWN	LINC01266	2	5	-0.553145
chr3	617789	618314	618051	ENSG00000238075.1	-	processed_pseudogene	KNOWN	RPSAP32	1	1	-0.762157
chr3	857124	858091	857607	ENSG00000224239.1	+	lincRNA	KNOWN	AC090044.2	1	2	-0.345886
chr3	1008135	1012934	1010534	ENSG00000235158.1	+	lincRNA	KNOWN	AC087430.1	1	2	-0.382927
chr3	1065580	1065875	1065727	ENSG00000244169.3	-	misc_RNA	KNOWN	RN7SL120P	1	1	-0.625074
chr3	1092576	1404217	1248396	ENSG00000134115.12	+	protein_coding	KNOWN	CNTN6	6	23	-0.540866
chr3	1394173	1394448	1394310	ENSG00000232563.1	-	processed_pseudogene	KNOWN	CRB3P1	1	1	-0.637556
chr3	1595777	1596245	1596011	ENSG00000184423.5	-	processed_pseudogene	KNOWN	RPL23AP38	1	1	-0.417022
chr3	1730070	1730474	1730272	ENSG00000214074.3	+	processed_pseudogene	KNOWN	RPL23AP39	1	1	-0.506146
chr3	1905651	1906125	1905888	ENSG00000214073.2	+	processed_pseudogene	KNOWN	RPL21P17	1	1	-0.314433
chr3	1962381	1987470	1974925	ENSG00000225044.1	-	lincRNA	KNOWN	RP11-204C23.1	1	2	-0.442300
chr3	2088933	2089211	2089072	ENSG00000223040.1	-	misc_RNA	KNOWN	RN7SKP144	1	1	-0.422581
chr3	2098813	3057956	2578384	ENSG00000144619.14	+	protein_coding	KNOWN	CNTN4	17	25	-0.399253
chr3	2110409	2144241	2127325	ENSG00000227588.2	-	lincRNA	KNOWN	CNTN4-AS2	1	3	-0.402928
chr3	2362258	2362738	2362498	ENSG00000230398.1	+	processed_pseudogene	KNOWN	HINT2P1	1	1	-0.348581
chr3	2985231	2985575	2985403	ENSG00000225310.1	-	processed_pseudogene	KNOWN	DNAJC19P4	1	1	-0.205502
chr3	3039033	3069242	3054137	ENSG00000237990.3	-	antisense	KNOWN	CNTN4-AS1	2	4	-0.321147
chr3	3066326	3126613	3096469	ENSG00000091181.19	-	protein_coding	KNOWN	IL5RA	11	13	-0.243262
chr3	3102913	3103015	3102964	ENSG00000253049.1	+	snoRNA	NOVEL	SNORA43	1	1	0.083530
chr3	3126916	3150879	3138897	ENSG00000072756.16	+	protein_coding	KNOWN	TRNT1	11	10	-0.090390
chr3	3145453	3145614	3145533	ENSG00000281584.1	-	protein_coding	KNOWN	AC024060.1	1	2	0.000069
chr3	3148992	3179710	3164351	ENSG00000113851.13	-	protein_coding	KNOWN	CRBN	13	11	-0.130914
chr3	3152942	3153435	3153188	ENSG00000271870.1	+	antisense	KNOWN	RP11-97C16.1	1	1	-0.029472
chr3	3250687	3627296	3438991	ENSG00000223727.6	-	lincRNA	KNOWN	AC026188.1	3	6	-0.428667
chr3	3646456	3646578	3646517	ENSG00000223036.1	+	miRNA	NOVEL	AC024158.1	1	1	-0.135814
chr3	3700814	4467281	4084047	ENSG00000144455.13	-	protein_coding	KNOWN	SUMF1	8	13	-0.296446
chr3	3799437	3847703	3823570	ENSG00000175928.5	+	protein_coding	KNOWN	LRRN1	3	3	-0.347549
chr3	3981981	3984295	3983138	ENSG00000229241.1	-	processed_pseudogene	KNOWN	PNPT1P1	1	1	0.073133
chr3	4303304	4317567	4310435	ENSG00000170364.12	+	protein_coding	KNOWN	SETMAR	8	4	-0.237316
chr3	4414580	4414960	4414770	ENSG00000234325.1	-	processed_pseudogene	KNOWN	MRPS10P2	1	1	0.022729
chr3	4490891	4493163	4492027	ENSG00000231249.1	-	antisense	KNOWN	ITPR1-AS1	1	2	-0.210037
chr3	4493348	4847840	4670594	ENSG00000150995.18	+	protein_coding	KNOWN	ITPR1	19	62	0.098863
chr3	4749192	4751590	4750391	ENSG00000235947.1	-	lincRNA	KNOWN	EGOT	1	2	0.401269
chr3	4750333	4750685	4750509	ENSG00000275981.1	+	misc_RNA	NOVEL	EGOT	1	1	0.480654
chr3	4782053	4782149	4782101	ENSG00000281217.1	+	miRNA	NOVEL	AC018816.1	1	1	-0.003489
chr3	4814294	4887293	4850793	ENSG00000235978.6	-	antisense	KNOWN	AC018816.3	7	5	0.103733
chr3	4896809	4979961	4938385	ENSG00000235831.6	-	antisense	KNOWN	BHLHE40-AS1	4	4	0.018113
chr3	4979116	4985323	4982219	ENSG00000134107.4	+	protein_coding	KNOWN	BHLHE40	3	5	0.125350
chr3	5068676	5069044	5068860	ENSG00000230182.1	-	processed_pseudogene	KNOWN	RNF10P1	1	1	0.372100
chr3	5080212	5084429	5082320	ENSG00000224082.1	-	unprocessed_pseudogene	KNOWN	UBTFL8	1	6	0.083379
chr3	5086178	5086279	5086228	ENSG00000207283.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.083379
chr3	5099627	5099861	5099744	ENSG00000237566.1	+	processed_pseudogene	KNOWN	AC090955.5	1	1	0.099897
chr3	5122220	5180912	5151566	ENSG00000134108.12	+	protein_coding	KNOWN	ARL8B	8	7	0.037824
chr3	5156905	5187329	5172117	ENSG00000233912.1	-	antisense	KNOWN	AC026202.3	1	4	-0.023649
chr3	5187172	5188298	5187735	ENSG00000268509.2	-	antisense	KNOWN	RP11-572B2.1	1	1	-0.064877
chr3	5187646	5219957	5203801	ENSG00000134109.10	+	protein_coding	KNOWN	EDEM1	7	12	0.267904
chr3	5250177	5250255	5250216	ENSG00000265180.1	-	miRNA	KNOWN	MIR4790	1	1	0.202416
chr3	5252926	5253223	5253074	ENSG00000241227.3	-	misc_RNA	KNOWN	RN7SL553P	1	1	0.202416
chr3	5255535	5256761	5256148	ENSG00000230944.1	-	lincRNA	KNOWN	AC026202.5	1	2	0.202416
chr3	5962842	6124120	6043481	ENSG00000229642.1	+	lincRNA	KNOWN	AC027119.1	1	3	-0.492331
chr3	6148484	6365885	6257184	ENSG00000226022.1	+	lincRNA	KNOWN	AC026167.1	1	3	-0.532485
chr3	6208269	6208571	6208420	ENSG00000232958.1	+	unprocessed_pseudogene	KNOWN	AC091069.1	1	2	-0.566971
chr3	6490479	6736129	6613304	ENSG00000189229.10	+	lincRNA	KNOWN	AC069277.2	5	5	-0.370751
chr3	6631689	6805449	6718569	ENSG00000226258.6	-	lincRNA	KNOWN	GRM7-AS3	9	5	-0.366933
chr3	6692319	6693088	6692703	ENSG00000223719.1	+	processed_pseudogene	KNOWN	AC024162.2	1	2	-0.232137
chr3	6770001	7741533	7255767	ENSG00000196277.15	+	protein_coding	KNOWN	GRM7	15	13	-0.427081
chr3	6773037	6773343	6773190	ENSG00000236152.1	-	processed_pseudogene	KNOWN	MRPS36P1	1	1	-0.265821
chr3	6892632	6894022	6893327	ENSG00000237665.1	-	antisense	KNOWN	GRM7-AS2	1	2	-0.345588
chr3	7519741	7560333	7540037	ENSG00000236202.1	-	antisense	KNOWN	GRM7-AS1	2	3	-0.397521
chr3	7606890	7607897	7607393	ENSG00000270207.1	-	antisense	KNOWN	RP11-157E16.1	1	1	-0.179310
chr3	7952805	8611924	8282364	ENSG00000227110.6	-	antisense	KNOWN	LMCD1-AS1	7	6	-0.142477
chr3	8006477	8006561	8006519	ENSG00000266293.1	-	miRNA	NOVEL	AC069276.1	1	1	-0.371409
chr3	8079322	8112924	8096123	ENSG00000228351.1	+	lincRNA	KNOWN	AC018832.1	1	6	-0.456485
chr3	8364529	8364648	8364588	ENSG00000253081.1	-	snRNA	KNOWN	RNU4ATAC17P	1	1	-0.508401
chr3	8364707	8366392	8365549	ENSG00000231401.1	-	lincRNA	KNOWN	AC023481.1	1	3	-0.508401
chr3	8501707	8574673	8538190	ENSG00000071282.11	+	protein_coding	KNOWN	LMCD1	7	6	0.355378
chr3	8573726	8593124	8583425	ENSG00000224884.1	-	lincRNA	KNOWN	AC034187.2	1	2	0.378915
chr3	8619400	8745040	8682220	ENSG00000125046.14	-	protein_coding	KNOWN	SSUH2	17	19	0.297377
chr3	8688143	8689159	8688651	ENSG00000215160.2	+	unprocessed_pseudogene	KNOWN	OR7E122P	1	1	0.261086
chr3	8695314	8695390	8695352	ENSG00000265330.1	+	miRNA	NOVEL	AC034187.4	1	1	0.173985
chr3	8696049	8696117	8696083	ENSG00000264097.1	-	miRNA	NOVEL	AC034187.1	1	1	0.173985
chr3	8696177	8696256	8696216	ENSG00000266275.1	+	miRNA	NOVEL	AC034187.5	1	1	0.173985
chr3	8700011	8700098	8700054	ENSG00000265169.1	+	miRNA	NOVEL	AC034187.3	1	1	0.173985
chr3	8733800	8841808	8787804	ENSG00000182533.6	+	protein_coding	KNOWN	CAV3	3	3	0.395609
chr3	8750408	8769628	8760018	ENSG00000180914.10	-	protein_coding	KNOWN	OXTR	4	4	0.751808
chr3	8771191	8771287	8771239	ENSG00000266778.1	+	miRNA	NOVEL	AC068312.1	1	1	0.728301
chr3	8775402	8963773	8869587	ENSG00000070950.9	-	protein_coding	KNOWN	RAD18	10	13	0.278028
chr3	8931495	8931632	8931563	ENSG00000281863.1	+	snoRNA	NOVEL	SNORA43	1	1	0.017991
chr3	8931506	8931631	8931568	ENSG00000199815.2	+	snoRNA	NOVEL	SNORA17	1	1	0.017991
chr3	8980591	9363053	9171822	ENSG00000196220.15	-	protein_coding	KNOWN	SRGAP3	13	22	0.089940
chr3	9014123	9015979	9015051	ENSG00000224808.1	+	antisense	KNOWN	SRGAP3-AS1	1	2	-0.222323
chr3	9192493	9194453	9193473	ENSG00000228723.6	+	antisense	KNOWN	SRGAP3-AS2	5	3	0.383758
chr3	9216895	9219508	9218201	ENSG00000227929.4	+	antisense	KNOWN	SRGAP3-AS3	1	5	0.161033
chr3	9256759	9257507	9257133	ENSG00000235830.1	+	lincRNA	KNOWN	SRGAP3-AS4	1	2	-0.098439
chr3	9292588	9363303	9327945	ENSG00000254485.5	-	antisense	KNOWN	RP11-380O24.1	5	4	0.094496
chr3	9348443	9349192	9348817	ENSG00000214041.4	+	processed_pseudogene	KNOWN	PGAM1P4	1	1	-0.054023
chr3	9349689	9398579	9374134	ENSG00000206573.8	-	antisense	KNOWN	THUMPD3-AS1	20	5	0.404515
chr3	9362842	9386791	9374816	ENSG00000134077.15	+	protein_coding	KNOWN	THUMPD3	10	10	0.389424
chr3	9397615	9479240	9438427	ENSG00000168137.15	+	protein_coding	KNOWN	SETD5	29	23	0.286646
chr3	9498361	9553802	9526081	ENSG00000156959.8	-	protein_coding	KNOWN	LHFPL4	3	4	0.283283
chr3	9600748	9602728	9601738	ENSG00000235338.1	+	processed_pseudogene	KNOWN	DUSP5P2	1	3	-0.003489
chr3	9649433	9702394	9675913	ENSG00000163719.18	+	protein_coding	KNOWN	MTMR14	14	20	0.432446
chr3	9703807	9729908	9716857	ENSG00000144550.12	+	protein_coding	KNOWN	CPNE9	5	21	0.668456
chr3	9731729	9748018	9739873	ENSG00000156983.15	+	protein_coding	KNOWN	BRPF1	8	14	0.373885
chr3	9749944	9788219	9769081	ENSG00000114026.21	+	protein_coding	KNOWN	OGG1	18	8	0.728801
chr3	9757342	9769992	9763667	ENSG00000134072.10	-	protein_coding	KNOWN	CAMK1	6	12	0.911113
chr3	9779860	9793011	9786435	ENSG00000171148.13	-	protein_coding	KNOWN	TADA3	6	9	0.567743
chr3	9792495	9807726	9800110	ENSG00000241553.12	+	protein_coding	KNOWN	ARPC4	8	7	0.695639
chr3	9793082	9835401	9814241	ENSG00000250151.9	+	protein_coding	KNOWN	ARPC4-TTLL3	4	12	0.781592
chr3	9808086	9855138	9831612	ENSG00000214021.15	+	protein_coding	KNOWN	TTLL3	33	13	0.826898
chr3	9812762	9813097	9812929	ENSG00000269886.1	-	antisense	KNOWN	RP11-266J6.2	1	1	0.822152
chr3	9837849	9844602	9841225	ENSG00000156990.14	-	protein_coding	KNOWN	RPUSD3	17	9	0.900595
chr3	9866711	9880254	9873482	ENSG00000187288.10	-	protein_coding	KNOWN	CIDEC	8	7	0.790136
chr3	9890554	9894349	9892451	ENSG00000171135.12	+	protein_coding	KNOWN	JAGN1	3	5	0.632042
chr3	9902612	9916402	9909507	ENSG00000163701.18	+	protein_coding	KNOWN	IL17RE	11	17	0.665904
chr3	9917074	9933630	9925352	ENSG00000163702.18	+	protein_coding	KNOWN	IL17RC	30	19	0.653417
chr3	9919051	9919153	9919102	ENSG00000212327.1	-	snRNA	KNOWN	RNU6-882P	1	1	0.704969
chr3	9933822	9945413	9939617	ENSG00000163703.17	+	protein_coding	KNOWN	CRELD1	11	12	0.469910
chr3	9935706	9936258	9935982	ENSG00000269894.1	+	sense_intronic	KNOWN	RP11-1020A11.1	1	1	0.469910
chr3	9945542	9952394	9948968	ENSG00000163704.11	-	protein_coding	KNOWN	PRRT3	3	5	0.573748
chr3	9947404	9954787	9951095	ENSG00000230082.1	+	antisense	KNOWN	PRRT3-AS1	1	4	0.662569
chr3	9958717	9962539	9960628	ENSG00000269982.1	+	antisense	KNOWN	RP11-1020A11.2	1	1	0.766987
chr3	9962537	10011116	9986826	ENSG00000125037.12	-	protein_coding	KNOWN	EMC3	5	8	0.387686
chr3	9986893	10006990	9996941	ENSG00000180385.8	+	transcribed_unprocessed_pseudogene	KNOWN	EMC3-AS1	6	5	0.324977
chr3	10000647	10000940	10000793	ENSG00000232901.1	-	processed_pseudogene	KNOWN	CYCSP10	1	1	0.330649
chr3	10006418	10011209	10008813	ENSG00000206567.9	-	lincRNA	KNOWN	AC022007.5	7	4	0.386906
chr3	10014238	10026365	10020301	ENSG00000186162.10	-	transcribed_unprocessed_pseudogene	KNOWN	CIDECP	6	3	0.553399
chr3	10026414	10101930	10064172	ENSG00000144554.10	+	protein_coding	KNOWN	FANCD2	13	44	0.226419
chr3	10037552	10037655	10037603	ENSG00000201182.1	+	snRNA	KNOWN	RNU6-670P	1	1	0.000844
chr3	10057973	10058287	10058130	ENSG00000229217.1	-	processed_pseudogene	KNOWN	CYCSP11	1	1	0.239422
chr3	10081317	10108231	10094774	ENSG00000163705.12	-	protein_coding	KNOWN	FANCD2OS	6	4	0.361398
chr3	10115592	10127190	10121391	ENSG00000254999.3	+	protein_coding	KNOWN	BRK1	1	3	0.626328
chr3	10141008	10152220	10146614	ENSG00000134086.7	+	protein_coding	KNOWN	VHL	3	3	0.558645
chr3	10164865	10243743	10204304	ENSG00000134070.4	+	protein_coding	KNOWN	IRAK2	1	13	0.635101
chr3	10217212	10217319	10217265	ENSG00000280637.1	+	snRNA	NOVEL	U6	1	1	0.485064
chr3	10248023	10281218	10264620	ENSG00000157014.10	+	protein_coding	KNOWN	TATDN2	4	8	0.347626
chr3	10249372	10285796	10267584	ENSG00000272410.5	+	protein_coding	KNOWN	RP11-438J1.1	2	8	0.351178
chr3	10278938	10279024	10278981	ENSG00000273665.1	-	miRNA	NOVEL	AC022384.2	1	1	0.475597
chr3	10284419	10285746	10285082	ENSG00000231177.4	+	antisense	KNOWN	LINC00852	2	1	0.475597
chr3	10285675	10292947	10289311	ENSG00000157017.15	-	protein_coding	KNOWN	GHRL	15	6	0.535153
chr3	10285754	10293449	10289601	ENSG00000240288.7	+	antisense	KNOWN	GHRLOS	4	4	0.541463
chr3	10287413	10287482	10287447	ENSG00000276678.1	+	misc_RNA	NOVEL	GHRLOS	1	1	0.475597
chr3	10293131	10321178	10307154	ENSG00000157020.17	-	protein_coding	KNOWN	SEC13	19	10	0.567577
chr3	10324023	10708031	10516027	ENSG00000157087.16	-	protein_coding	KNOWN	ATP2B2	9	23	0.169358
chr3	10330192	10330300	10330246	ENSG00000264534.2	+	miRNA	NOVEL	AC022384.1	1	1	0.499167
chr3	10394481	10394540	10394510	ENSG00000216135.2	-	miRNA	KNOWN	MIR885	1	1	0.189289
chr3	10481963	10482025	10481994	ENSG00000239167.1	+	miRNA	NOVEL	AC090841.1	1	1	0.091992
chr3	10566255	10570375	10568315	ENSG00000236999.1	-	sense_intronic	KNOWN	ATP2B2-IT1	1	2	0.140697
chr3	10626021	10626807	10626414	ENSG00000224771.1	-	sense_intronic	KNOWN	ATP2B2-IT2	1	2	0.125780
chr3	10759484	10764192	10761838	ENSG00000226567.1	-	lincRNA	KNOWN	LINC00606	2	3	0.024878
chr3	10767464	10771718	10769591	ENSG00000230599.2	+	lincRNA	KNOWN	AC018495.3	1	2	0.162663
chr3	10816200	10940733	10878466	ENSG00000132164.9	+	protein_coding	KNOWN	SLC6A11	3	14	-0.027665
chr3	10992724	11039247	11015985	ENSG00000157103.10	+	protein_coding	KNOWN	SLC6A1	5	16	0.037273
chr3	11006098	11019224	11012661	ENSG00000232287.2	-	antisense	KNOWN	SLC6A1-AS1	1	3	0.021177
chr3	11137093	11263557	11200325	ENSG00000196639.6	+	protein_coding	KNOWN	HRH1	4	3	0.360719
chr3	11234256	11234582	11234419	ENSG00000213964.3	-	processed_pseudogene	KNOWN	CHCHD4P4	1	1	0.280601
chr3	11272309	11557665	11414987	ENSG00000197548.12	+	protein_coding	KNOWN	ATG7	24	19	0.143059
chr3	11290406	11290663	11290534	ENSG00000226621.1	-	processed_pseudogene	KNOWN	AC083855.5	1	1	0.139820
chr3	11488300	11488473	11488386	ENSG00000235240.1	-	unprocessed_pseudogene	KNOWN	AC026185.1	1	1	0.013989
chr3	11529488	11529755	11529621	ENSG00000270531.1	-	processed_pseudogene	KNOWN	RP11-169K17.2	1	1	0.284637
chr3	11556070	11771350	11663710	ENSG00000144560.13	-	protein_coding	KNOWN	VGLL4	18	7	0.286679
chr3	11607184	11610748	11608966	ENSG00000271716.1	+	antisense	KNOWN	RP11-169K17.4	1	2	0.368259
chr3	11611602	11612197	11611899	ENSG00000272483.1	+	antisense	KNOWN	RP11-169K17.3	1	1	0.318500
chr3	11790442	11846919	11818680	ENSG00000144559.10	-	protein_coding	KNOWN	TAMM41	12	10	0.164911
chr3	11859674	11891172	11875423	ENSG00000230342.2	+	unprocessed_pseudogene	KNOWN	FANCD2P2	1	14	-0.318029
chr3	11878830	11879129	11878979	ENSG00000224263.1	-	processed_pseudogene	KNOWN	CYCSP12	1	1	-0.570313
chr3	11900011	11901245	11900628	ENSG00000225275.4	+	unprocessed_pseudogene	KNOWN	NUP210P2	1	2	-0.296079
chr3	11906527	11912313	11909420	ENSG00000231897.1	+	unprocessed_pseudogene	KNOWN	MARK2P14	1	3	-0.123303
chr3	11909634	11910765	11910199	ENSG00000251038.1	-	unprocessed_pseudogene	KNOWN	AC090958.5	1	3	-0.003486
chr3	11952788	11953085	11952936	ENSG00000263988.2	-	misc_RNA	KNOWN	RN7SL147P	1	1	-0.291712
chr3	12004402	12191400	12097901	ENSG00000157152.16	+	protein_coding	KNOWN	SYN2	6	13	-0.281237
chr3	12070195	12071360	12070777	ENSG00000226642.1	+	processed_pseudogene	KNOWN	ACTG1P12	1	1	-0.754203
chr3	12071038	12071121	12071079	ENSG00000265870.1	+	miRNA	NOVEL	AC026166.1	1	1	-0.754203
chr3	12153051	12159351	12156201	ENSG00000157150.4	-	protein_coding	KNOWN	TIMP4	1	5	0.205761
chr3	12165299	12165642	12165470	ENSG00000233026.1	-	processed_pseudogene	KNOWN	MTCO1P5	1	1	0.205761
chr3	12257801	12258460	12258130	ENSG00000236062.1	-	processed_pseudogene	KNOWN	GSTM5P1	1	1	-0.188745
chr3	12287368	12434356	12360862	ENSG00000132170.19	+	protein_coding	KNOWN	PPARG	14	9	-0.309028
chr3	12328003	12328274	12328138	ENSG00000225026.1	+	processed_pseudogene	KNOWN	AC091492.2	1	1	-0.374431
chr3	12403193	12403513	12403353	ENSG00000281346.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.225490
chr3	12484432	12539623	12512027	ENSG00000154743.17	+	protein_coding	KNOWN	TSEN2	11	13	0.157384
chr3	12511095	12511213	12511154	ENSG00000200114.1	-	rRNA	KNOWN	RNA5SP123	1	1	0.001794
chr3	12514706	12514807	12514756	ENSG00000251774.1	+	snRNA	KNOWN	RNU6-377P	1	1	0.001794
chr3	12514934	12561059	12537996	ENSG00000225526.4	-	protein_coding	KNOWN	MKRN2OS	4	6	0.046007
chr3	12557014	12583713	12570363	ENSG00000075975.15	+	protein_coding	KNOWN	MKRN2	3	8	0.242914
chr3	12576961	12577237	12577099	ENSG00000274514.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.401161
chr3	12583601	12664226	12623913	ENSG00000132155.11	-	protein_coding	KNOWN	RAF1	12	18	0.387274
chr3	12673699	12673883	12673791	ENSG00000233252.1	+	processed_pseudogene	KNOWN	CRIP1P1	1	1	0.310632
chr3	12733525	12769457	12751491	ENSG00000088726.15	-	protein_coding	KNOWN	TMEM40	8	12	0.343678
chr3	12787393	12788671	12788032	ENSG00000213943.3	-	processed_pseudogene	KNOWN	KRT18P17	1	1	0.401039
chr3	12796472	12871916	12834194	ENSG00000144712.11	+	protein_coding	KNOWN	CAND2	6	15	0.455701
chr3	12832219	12832728	12832473	ENSG00000272263.1	-	antisense	KNOWN	RP11-767C1.2	1	1	0.542076
chr3	12834485	12841588	12838036	ENSG00000144713.12	-	protein_coding	KNOWN	RPL32	8	4	0.542076
chr3	12840294	12840396	12840345	ENSG00000281117.1	-	miRNA	NOVEL	AC034198.1	1	1	0.542076
chr3	12840312	12840450	12840381	ENSG00000207496.1	-	snoRNA	KNOWN	SNORA7A	1	1	0.542076
chr3	12850659	12850860	12850759	ENSG00000250939.2	+	transcribed_unprocessed_pseudogene	KNOWN	AC034198.7	1	1	0.228196
chr3	12877522	12885211	12881366	ENSG00000232746.1	-	lincRNA	KNOWN	RP11-767C1.1	1	3	0.452989
chr3	12897220	13073117	12985168	ENSG00000144711.13	-	protein_coding	KNOWN	IQSEC1	5	14	0.617354
chr3	13052967	13053122	13053044	ENSG00000231362.1	-	processed_pseudogene	KNOWN	RP11-715I4.1	1	1	0.397177
chr3	13316235	13420309	13368272	ENSG00000132182.11	-	protein_coding	KNOWN	NUP210	4	40	0.178178
chr3	13460294	13460398	13460346	ENSG00000238138.1	-	processed_pseudogene	KNOWN	AC027124.3	1	1	0.064856
chr3	13460424	13460889	13460656	ENSG00000223398.1	-	processed_pseudogene	KNOWN	AC027124.2	1	1	0.064856
chr3	13476982	13480053	13478517	ENSG00000244502.2	-	antisense	KNOWN	HDAC11-AS1	1	2	0.370807
chr3	13479724	13506424	13493074	ENSG00000163517.14	+	protein_coding	KNOWN	HDAC11	21	10	0.361842
chr3	13549131	13638422	13593776	ENSG00000163520.13	+	protein_coding	KNOWN	FBLN2	7	18	0.685306
chr3	13650696	13746637	13698666	ENSG00000224514.2	+	antisense	KNOWN	LINC00620	2	6	0.262957
chr3	13717918	13718008	13717963	ENSG00000265457.1	-	miRNA	NOVEL	AC093611.2	1	1	0.200805
chr3	13738060	13738131	13738095	ENSG00000238827.1	-	miRNA	NOVEL	AC093611.1	1	1	-0.356282
chr3	13816258	13880121	13848189	ENSG00000154764.5	-	protein_coding	KNOWN	WNT7A	3	4	0.209068
chr3	13926813	13927778	13927295	ENSG00000233121.1	+	unitary_pseudogene	KNOWN	VN1R20P	1	1	-0.033539
chr3	13933056	13937477	13935266	ENSG00000275340.1	+	transcribed_unprocessed_pseudogene	KNOWN	FGD5P1	2	3	-0.036165
chr3	13937256	14082811	14010033	ENSG00000180438.14	+	protein_coding	KNOWN	TPRXL	12	5	-0.227463
chr3	14089107	14089871	14089489	ENSG00000224752.1	-	unitary_pseudogene	KNOWN	VN1R21P	1	1	0.013989
chr3	14112077	14124870	14118473	ENSG00000163528.12	-	protein_coding	KNOWN	CHCHD4	3	5	-0.025365
chr3	14124940	14143679	14134309	ENSG00000170876.7	+	protein_coding	KNOWN	TMEM43	2	12	0.348890
chr3	14135217	14148252	14141734	ENSG00000268279.4	+	protein_coding	KNOWN	RP11-434D12.1	3	5	0.487293
chr3	14144637	14165978	14155307	ENSG00000228242.6	+	antisense	KNOWN	AC093495.4	17	7	0.544494
chr3	14145147	14178783	14161965	ENSG00000154767.14	-	protein_coding	KNOWN	XPC	7	16	0.441840
chr3	14178358	14201119	14189738	ENSG00000170860.3	+	protein_coding	KNOWN	LSM3	1	4	0.048198
chr3	14272373	14303845	14288109	ENSG00000255021.1	-	lincRNA	KNOWN	RP11-536I6.2	1	2	0.456897
chr3	14348451	14352568	14350509	ENSG00000251576.1	-	lincRNA	KNOWN	LINC01267	1	3	0.653991
chr3	14394648	14394757	14394702	ENSG00000199609.1	+	rRNA	KNOWN	RNA5SP124	1	1	0.502994
chr3	14402576	14489349	14445962	ENSG00000131389.16	+	protein_coding	KNOWN	SLC6A6	11	15	0.624427
chr3	14489111	14542081	14515596	ENSG00000144596.11	-	protein_coding	KNOWN	GRIP2	5	25	0.500969
chr3	14530982	14531088	14531035	ENSG00000207163.1	-	snRNA	KNOWN	RNU6-905P	1	1	0.474041
chr3	14535694	14535797	14535745	ENSG00000280472.1	+	miRNA	NOVEL	AC090952.1	1	1	0.474041
chr3	14572852	14574792	14573822	ENSG00000234123.1	-	processed_pseudogene	KNOWN	RHBDF1P1	1	1	0.273742
chr3	14648194	14649432	14648813	ENSG00000235629.1	-	antisense	KNOWN	AC090952.5	1	2	0.029256
chr3	14651746	14672659	14662202	ENSG00000154781.15	+	protein_coding	KNOWN	CCDC174	6	13	0.379350
chr3	14675099	14773034	14724066	ENSG00000131379.9	+	protein_coding	KNOWN	C3orf20	4	17	-0.011509
chr3	14764952	14767440	14766196	ENSG00000230172.1	-	antisense	KNOWN	AC090957.2	1	2	-0.300793
chr3	14799331	14811414	14805372	ENSG00000260902.1	-	lincRNA	KNOWN	RP11-95M5.1	1	3	0.022858
chr3	14818962	14934565	14876763	ENSG00000154783.10	+	protein_coding	KNOWN	FGD5	6	20	0.102272
chr3	14920347	14948424	14934385	ENSG00000225733.5	-	antisense	KNOWN	FGD5-AS1	5	6	0.087518
chr3	14947584	15053600	15000592	ENSG00000177463.15	+	protein_coding	KNOWN	NR2C2	13	15	0.037954
chr3	15042460	15065335	15053897	ENSG00000131368.7	-	protein_coding	KNOWN	MRPS25	7	4	0.306401
chr3	15070073	15099163	15084618	ENSG00000131381.12	-	protein_coding	KNOWN	RBSN	9	14	0.307188
chr3	15131848	15132208	15132028	ENSG00000228874.1	-	processed_pseudogene	KNOWN	AC090954.5	1	1	0.231307
chr3	15134383	15134530	15134456	ENSG00000221424.1	-	miRNA	NOVEL	AC090954.1	1	1	0.231307
chr3	15141380	15142157	15141768	ENSG00000227578.1	+	processed_pseudogene	KNOWN	RPS3AP53	1	1	0.231307
chr3	15151833	15205959	15178896	ENSG00000230524.8	-	unitary_pseudogene	KNOWN	COL6A4P1	4	13	0.015768
chr3	15160868	15160962	15160915	ENSG00000273809.1	-	miRNA	NOVEL	AC090954.2	1	1	-0.032815
chr3	15206152	15252918	15229535	ENSG00000131375.9	+	protein_coding	KNOWN	CAPN7	7	21	-0.140336
chr3	15254184	15264493	15259338	ENSG00000224660.1	+	antisense	KNOWN	SH3BP5-AS1	3	3	-0.044697
chr3	15254853	15341368	15298110	ENSG00000131370.15	-	protein_coding	KNOWN	SH3BP5	9	11	0.361099
chr3	15339749	15339855	15339802	ENSG00000201162.1	+	snRNA	KNOWN	RNU6-454P	1	1	0.259343
chr3	15375373	15375645	15375509	ENSG00000226427.1	-	processed_pseudogene	KNOWN	HMGN2P7	1	1	0.465609
chr3	15381275	15440566	15410920	ENSG00000206562.11	-	protein_coding	KNOWN	METTL6	10	7	0.255195
chr3	15427355	15450635	15438995	ENSG00000144597.13	+	protein_coding	KNOWN	EAF1	3	6	0.392248
chr3	15433110	15433216	15433163	ENSG00000206926.1	-	snRNA	KNOWN	RNU6-1024P	1	1	0.406865
chr3	15436171	15455940	15446055	ENSG00000249786.7	-	antisense	KNOWN	EAF1-AS1	13	6	0.377448
chr3	15450133	15521751	15485942	ENSG00000206561.12	-	protein_coding	KNOWN	COLQ	8	17	0.161639
chr3	15496239	15496308	15496273	ENSG00000263573.1	-	miRNA	KNOWN	MIR4270	1	1	0.107759
chr3	15506623	15506905	15506764	ENSG00000241064.3	-	misc_RNA	KNOWN	RN7SL110P	1	1	0.107759
chr3	15560704	15601852	15581278	ENSG00000131373.14	-	protein_coding	KNOWN	HACL1	13	17	0.238588
chr3	15601341	15645822	15623581	ENSG00000169814.12	+	protein_coding	KNOWN	BTD	12	6	0.203042
chr3	15667236	15859771	15763503	ENSG00000206560.10	-	protein_coding	KNOWN	ANKRD28	16	29	-0.072624
chr3	15697298	15697371	15697334	ENSG00000264354.1	-	miRNA	KNOWN	MIR3134	1	1	0.006824
chr3	15731877	15732536	15732206	ENSG00000279465.1	+	TEC	KNOWN	RP11-44D5.2	1	1	0.134056
chr3	15732252	15733470	15732861	ENSG00000270409.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-44D5.1	2	2	0.134056
chr3	15738515	15738809	15738662	ENSG00000263740.2	+	misc_RNA	KNOWN	RN7SL4P	1	1	0.134056
chr3	15738657	15738718	15738687	ENSG00000281814.1	+	miRNA	NOVEL	AC090950.1	1	1	0.134056
chr3	15873771	15873849	15873810	ENSG00000207815.1	+	miRNA	KNOWN	MIR563	1	1	0.215727
chr3	15878047	15879571	15878809	ENSG00000224728.1	+	processed_pseudogene	KNOWN	AC090945.1	1	1	0.215727
chr3	16174649	16231992	16203320	ENSG00000131386.17	+	protein_coding	KNOWN	GALNT15	6	10	0.330379
chr3	16257978	16264972	16261475	ENSG00000154813.9	-	protein_coding	KNOWN	DPH3	4	3	0.069272
chr3	16265160	16350299	16307729	ENSG00000154814.13	+	protein_coding	KNOWN	OXNAD1	9	10	0.149926
chr3	16275060	16276632	16275846	ENSG00000270739.1	-	processed_pseudogene	KNOWN	RP11-608O8.2	1	3	0.213455
chr3	16313574	16514026	16413800	ENSG00000131378.13	-	protein_coding	KNOWN	RFTN1	12	10	0.218008
chr3	16314439	16314987	16314713	ENSG00000271964.1	+	antisense	KNOWN	RP11-415F23.2	1	1	0.060797
chr3	16339308	16339871	16339589	ENSG00000272498.1	+	antisense	KNOWN	RP11-415F23.3	1	1	0.315430
chr3	16345126	16346440	16345783	ENSG00000272529.1	+	antisense	KNOWN	RP11-415F23.4	1	2	0.315430
chr3	16530771	16531802	16531286	ENSG00000269391.1	+	lincRNA	KNOWN	RP11-194G10.3	1	2	0.042604
chr3	16536320	16541373	16538846	ENSG00000233570.1	+	lincRNA	KNOWN	LINC00690	1	3	0.042604
chr3	16586792	16670306	16628549	ENSG00000092345.13	-	protein_coding	KNOWN	DAZL	3	11	-0.274299
chr3	16619521	16619618	16619569	ENSG00000264034.1	-	miRNA	NOVEL	AC010139.1	1	1	0.002355
chr3	16687986	16697479	16692732	ENSG00000229271.1	-	lincRNA	KNOWN	AC091493.2	1	3	0.025625
chr3	16692745	16694202	16693473	ENSG00000224039.1	-	unprocessed_pseudogene	KNOWN	AC091493.1	1	1	0.048403
chr3	16802651	17090594	16946622	ENSG00000154822.15	+	protein_coding	KNOWN	PLCL2	4	6	-0.168971
chr3	16933196	16933260	16933228	ENSG00000264818.1	+	miRNA	KNOWN	MIR3714	1	1	-0.166320
chr3	17042742	17044192	17043467	ENSG00000226441.2	-	antisense	KNOWN	PLCL2-AS1	1	2	-0.122452
chr3	17135650	17135722	17135686	ENSG00000252976.1	-	miRNA	NOVEL	AC090644.1	1	1	0.114131
chr3	17157162	18444817	17800989	ENSG00000131374.14	-	protein_coding	KNOWN	TBC1D5	30	24	-0.317336
chr3	17333126	17333431	17333278	ENSG00000231780.1	+	processed_pseudogene	KNOWN	AC090960.1	1	1	-0.523185
chr3	17465150	17465510	17465330	ENSG00000227309.1	+	processed_pseudogene	KNOWN	AC140076.1	1	1	-0.367440
chr3	17664963	17665025	17664994	ENSG00000271841.1	+	snRNA	KNOWN	RNU7-10P	1	1	-0.451630
chr3	17706058	17706233	17706145	ENSG00000233133.1	-	unprocessed_pseudogene	KNOWN	AC104451.2	1	1	-0.284863
chr3	17871729	17872598	17872163	ENSG00000213383.2	-	processed_pseudogene	KNOWN	AC104297.1	1	1	-0.247983
chr3	17877455	17878169	17877812	ENSG00000214286.2	-	processed_pseudogene	KNOWN	PDCL3P3	1	1	-0.247983
chr3	17990023	17995544	17992783	ENSG00000226238.1	+	lincRNA	KNOWN	AC132807.1	1	2	-0.328714
chr3	18013226	18041603	18027414	ENSG00000274840.4	+	lincRNA	KNOWN	RP11-320G10.1	2	5	-0.175080
chr3	18345387	18445588	18395487	ENSG00000182568.16	-	protein_coding	KNOWN	SATB1	18	12	-0.599340
chr3	18408680	18409635	18409157	ENSG00000272477.1	-	sense_intronic	KNOWN	RP11-158G18.1	1	1	-0.574271
chr3	18445024	18920401	18682712	ENSG00000228956.8	+	processed_transcript	KNOWN	SATB1-AS1	73	9	-0.566201
chr3	18538673	18539899	18539286	ENSG00000236570.1	+	processed_pseudogene	KNOWN	RAD23BP1	1	1	-0.597408
chr3	18954943	18955049	18954996	ENSG00000251761.1	-	snRNA	KNOWN	RNU6-138P	1	1	-0.802140
chr3	19148454	19535646	19342050	ENSG00000183960.8	+	protein_coding	KNOWN	KCNH8	3	16	-0.587206
chr3	19314848	19314931	19314889	ENSG00000271898.1	-	miRNA	KNOWN	MIR4791	1	1	-0.410509
chr3	19879472	19947025	19913248	ENSG00000163576.17	-	protein_coding	KNOWN	EFHB	7	15	-0.239458
chr3	19940269	19943310	19941789	ENSG00000232953.1	-	processed_pseudogene	KNOWN	HSPA8P18	1	3	-0.379832
chr3	19947079	19985175	19966127	ENSG00000144566.10	+	protein_coding	KNOWN	RAB5A	8	7	-0.091948
chr3	19979961	20012330	19996145	ENSG00000183977.13	-	protein_coding	KNOWN	PP2D1	3	4	-0.135120
chr3	19996803	19996925	19996864	ENSG00000201545.1	+	snRNA	KNOWN	RNU4-85P	1	1	-0.107317
chr3	20007852	20008247	20008049	ENSG00000230697.1	-	processed_pseudogene	KNOWN	SAP18P3	1	1	-0.107317
chr3	20012452	20012606	20012529	ENSG00000229468.1	+	processed_pseudogene	KNOWN	RPL39P18	1	1	-0.288913
chr3	20040023	20154404	20097213	ENSG00000114166.7	+	protein_coding	KNOWN	KAT2B	5	18	-0.178042
chr3	20137565	20137641	20137603	ENSG00000266745.1	+	miRNA	KNOWN	MIR3135A	1	1	0.031450
chr3	20160593	20186292	20173442	ENSG00000129810.14	-	protein_coding	KNOWN	SGOL1	13	9	-0.076528
chr3	20174244	21145967	20660105	ENSG00000231304.2	+	processed_transcript	KNOWN	SGOL1-AS1	6	17	-0.312227
chr3	20268965	20269070	20269017	ENSG00000199577.1	-	snRNA	KNOWN	RNU6-822P	1	1	-0.082259
chr3	20388249	20390562	20389405	ENSG00000261734.1	+	lincRNA	KNOWN	RP11-669C19.1	1	1	0.057649
chr3	20507644	20507756	20507700	ENSG00000206807.1	-	snRNA	KNOWN	RNU6-815P	1	1	-0.241618
chr3	21006730	21226305	21116517	ENSG00000282987.1	-	lincRNA	KNOWN	RP11-901H12.1	1	3	-0.254839
chr3	21138263	21138341	21138302	ENSG00000221659.1	-	miRNA	NOVEL	AC104441.1	1	1	-0.252656
chr3	21382478	21382542	21382510	ENSG00000273842.1	+	miRNA	NOVEL	AC104183.2	1	1	-0.128850
chr3	21388533	21388617	21388575	ENSG00000252306.1	-	miRNA	NOVEL	AC104183.1	1	1	-0.128850
chr3	21405737	21406508	21406122	ENSG00000236380.5	+	processed_pseudogene	KNOWN	VENTXP7	1	1	0.259592
chr3	21412222	22373321	21892771	ENSG00000151789.10	-	protein_coding	KNOWN	ZNF385D	11	8	-0.444328
chr3	21542816	21579959	21561387	ENSG00000225542.1	+	antisense	KNOWN	ZNF385D-AS1	1	3	-0.427178
chr3	21621486	21621568	21621527	ENSG00000280519.1	+	snoRNA	NOVEL	SNORA32	1	1	-0.195585
chr3	21829738	21829837	21829787	ENSG00000221384.1	+	miRNA	NOVEL	AC023798.1	1	1	-0.252343
chr3	21942566	21979828	21961197	ENSG00000223351.5	+	lincRNA	KNOWN	ZNF385D-AS2	2	4	-0.412263
chr3	22381819	22382929	22382374	ENSG00000132967.9	+	transcribed_processed_pseudogene	KNOWN	HMGB1P5	2	1	-0.497632
chr3	22670201	22670711	22670456	ENSG00000234723.1	-	unprocessed_pseudogene	KNOWN	AC092421.1	1	3	-0.605212
chr3	22811390	22812047	22811718	ENSG00000271235.1	-	processed_pseudogene	KNOWN	RP11-1037D22.1	1	2	-0.462597
chr3	22904135	22905151	22904643	ENSG00000226183.1	+	processed_pseudogene	KNOWN	RANP7	1	2	-0.772545
chr3	22989823	22991582	22990702	ENSG00000231915.2	+	unprocessed_pseudogene	KNOWN	SALL4P5	1	1	-0.434434
chr3	23134372	23134824	23134598	ENSG00000215016.2	+	processed_pseudogene	KNOWN	RPL24P7	1	1	-0.125037
chr3	23195070	23202578	23198824	ENSG00000233153.5	-	antisense	KNOWN	UBE2E2-AS1	3	2	-0.219952
chr3	23203020	23591793	23397406	ENSG00000182247.9	+	protein_coding	KNOWN	UBE2E2	7	6	-0.187993
chr3	23273807	23273910	23273858	ENSG00000206728.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.337176
chr3	23389661	23389909	23389785	ENSG00000228171.1	-	unprocessed_pseudogene	KNOWN	AC121251.1	1	1	-0.239990
chr3	23399500	23399569	23399534	ENSG00000221506.1	-	miRNA	NOVEL	AC092038.1	1	1	-0.197515
chr3	23480497	23480578	23480537	ENSG00000265645.1	-	miRNA	NOVEL	AC092038.2	1	1	-0.203833
chr3	23613661	23613759	23613710	ENSG00000252562.1	-	snRNA	KNOWN	RNU6-922P	1	1	0.399501
chr3	23641489	23641592	23641540	ENSG00000212269.1	-	snRNA	KNOWN	RNU6-788P	1	1	0.023686
chr3	23767611	23767704	23767657	ENSG00000238672.1	+	miRNA	NOVEL	AC020626.1	1	1	-0.043096
chr3	23804024	23806905	23805464	ENSG00000223791.1	-	antisense	KNOWN	UBE2E1-AS1	1	2	-0.090069
chr3	23805903	23891316	23848609	ENSG00000170142.11	+	protein_coding	KNOWN	UBE2E1	11	6	0.069232
chr3	23878981	23879498	23879239	ENSG00000231395.1	-	processed_pseudogene	KNOWN	AC124914.3	1	1	0.289722
chr3	23891660	23946591	23919125	ENSG00000197885.10	-	protein_coding	KNOWN	NKIRAS1	9	5	0.184571
chr3	23916545	23923692	23920118	ENSG00000174748.18	+	protein_coding	KNOWN	RPL15	13	5	0.208133
chr3	23945260	23980618	23962939	ENSG00000174738.12	+	protein_coding	KNOWN	NR1D2	5	9	0.136240
chr3	24096269	24103238	24099753	ENSG00000224074.3	-	lincRNA	KNOWN	LINC00691	2	4	-0.273526
chr3	24096512	24097360	24096936	ENSG00000242109.1	-	transcribed_processed_pseudogene	KNOWN	NPM1P23	1	1	-0.273526
chr3	24117160	24495282	24306221	ENSG00000151090.17	-	protein_coding	KNOWN	THRB	12	12	-0.341886
chr3	24430748	24431107	24430927	ENSG00000229756.1	+	processed_pseudogene	KNOWN	RPL31P20	1	1	-0.724786
chr3	24455136	24459434	24457285	ENSG00000224822.1	-	sense_intronic	KNOWN	THRB-IT1	1	2	-0.615226
chr3	24494087	24681711	24587899	ENSG00000228791.7	+	processed_transcript	KNOWN	THRB-AS1	11	5	-0.520623
chr3	24496272	24499580	24497926	ENSG00000272554.1	-	lincRNA	KNOWN	RP11-317L10.1	1	2	-0.334541
chr3	24521362	24521435	24521398	ENSG00000265028.1	-	miRNA	KNOWN	MIR4792	1	1	-0.492971
chr3	24555834	24556459	24556146	ENSG00000233544.1	+	processed_pseudogene	KNOWN	EIF3KP2	1	1	-0.444509
chr3	24687919	25174305	24931112	ENSG00000237838.1	+	lincRNA	KNOWN	AC133680.1	1	6	-0.419886
chr3	25020166	25020463	25020314	ENSG00000244404.3	-	misc_RNA	KNOWN	RN7SL216P	1	1	-0.189947
chr3	25025007	25025126	25025066	ENSG00000201713.1	+	rRNA	KNOWN	RNA5SP125	1	1	-0.189947
chr3	25174332	25597932	25386132	ENSG00000077092.18	+	protein_coding	KNOWN	RARB	8	8	-0.295000
chr3	25324174	25324659	25324416	ENSG00000213877.3	+	processed_pseudogene	KNOWN	CFL1P7	1	1	-0.728302
chr3	25345565	25345665	25345615	ENSG00000275044.1	+	miRNA	NOVEL	AC098477.1	1	1	-0.149766
chr3	25352284	25352392	25352338	ENSG00000201962.1	-	rRNA	KNOWN	RNA5SP126	1	1	-0.283766
chr3	25441164	25441502	25441333	ENSG00000229421.1	-	processed_pseudogene	KNOWN	AC133141.1	1	1	-0.171043
chr3	25555543	25555606	25555574	ENSG00000272166.1	-	snoRNA	NOVEL	SNORD5	1	1	-0.433264
chr3	25597905	25664907	25631406	ENSG00000077097.13	-	protein_coding	KNOWN	TOP2B	7	36	-0.214820
chr3	25618132	25618312	25618222	ENSG00000275227.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.360076
chr3	25664873	25664939	25664906	ENSG00000264219.1	-	miRNA	KNOWN	MIR4442	1	1	-0.254333
chr3	25686896	25687123	25687009	ENSG00000238225.1	+	processed_pseudogene	KNOWN	CRIP1P2	1	1	-0.166320
chr3	25718944	25790039	25754491	ENSG00000151092.16	-	protein_coding	KNOWN	NGLY1	15	12	-0.314982
chr3	25749488	25749896	25749692	ENSG00000213872.3	+	processed_pseudogene	KNOWN	AC092798.2	1	1	-0.356871
chr3	25754925	25755670	25755297	ENSG00000213871.3	+	processed_pseudogene	KNOWN	TAF9BP1	1	1	-0.277582
chr3	25782917	25794534	25788725	ENSG00000151093.7	+	protein_coding	KNOWN	OXSM	9	4	-0.296852
chr3	25858533	25873700	25866116	ENSG00000230891.6	-	processed_transcript	KNOWN	LINC00692	2	8	-0.315189
chr3	26015669	26016369	26016019	ENSG00000234158.1	+	processed_pseudogene	KNOWN	RPEP2	1	1	-0.683302
chr3	26216322	26216877	26216599	ENSG00000237603.1	+	processed_pseudogene	KNOWN	HMGB3P12	1	1	-0.290624
chr3	26346681	26347638	26347159	ENSG00000230465.1	-	processed_pseudogene	KNOWN	VENTXP4	1	1	-0.550456
chr3	26619330	26622690	26621010	ENSG00000225386.1	-	lincRNA	KNOWN	AC099754.1	1	4	-0.312398
chr3	26622806	26710776	26666791	ENSG00000179796.11	+	protein_coding	KNOWN	LRRC3B	6	3	-0.329761
chr3	26712307	26713364	26712835	ENSG00000234165.1	+	lincRNA	KNOWN	AC114877.3	1	2	-0.266056
chr3	26753937	26754076	26754006	ENSG00000221438.1	-	miRNA	NOVEL	AC114877.1	1	1	-0.277958
chr3	27110085	27369460	27239772	ENSG00000163491.16	-	protein_coding	KNOWN	NEK10	13	39	-0.197550
chr3	27214816	27215018	27214917	ENSG00000224237.1	-	processed_pseudogene	KNOWN	MINOS1P3	1	1	-0.063879
chr3	27265580	27265683	27265631	ENSG00000207251.1	-	snRNA	KNOWN	RNU6-342P	1	1	-0.511210
chr3	27362566	27362658	27362612	ENSG00000221573.1	-	miRNA	NOVEL	AC099535.1	1	1	-0.331220
chr3	27372721	27484420	27428570	ENSG00000033867.16	-	protein_coding	KNOWN	SLC4A7	18	28	-0.049648
chr3	27462506	27462816	27462661	ENSG00000227523.1	+	processed_pseudogene	KNOWN	RPS20P15	1	1	-0.188745
chr3	27486247	27486617	27486432	ENSG00000230807.1	+	processed_pseudogene	KNOWN	AC099535.4	1	1	0.043629
chr3	27513871	27514032	27513951	ENSG00000201033.1	+	snRNA	KNOWN	RNU1-96P	1	1	-0.076984
chr3	27525353	27525394	27525373	ENSG00000232167.1	+	processed_pseudogene	KNOWN	AC137675.1	1	1	-0.076984
chr3	27547757	27547858	27547807	ENSG00000238912.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.157955
chr3	27624202	27624456	27624329	ENSG00000223968.1	-	processed_pseudogene	KNOWN	AC098614.1	1	1	0.396846
chr3	27632976	27635427	27634201	ENSG00000213846.5	+	transcribed_processed_pseudogene	KNOWN	AC098614.2	2	1	0.099854
chr3	27638315	27638776	27638545	ENSG00000271943.1	+	lincRNA	KNOWN	RP11-222K16.1	1	1	0.099854
chr3	27703129	27703568	27703348	ENSG00000232766.1	-	processed_pseudogene	KNOWN	AC098614.3	1	1	-0.240278
chr3	27712910	27714005	27713457	ENSG00000272282.1	+	lincRNA	KNOWN	RP11-222K16.2	1	1	-0.056107
chr3	27715949	27722711	27719330	ENSG00000163508.12	-	protein_coding	KNOWN	EOMES	3	6	-0.056107
chr3	27802762	27891301	27847031	ENSG00000225548.5	+	lincRNA	KNOWN	AC098973.2	3	4	-0.368020
chr3	27830888	27834136	27832512	ENSG00000229243.1	-	lincRNA	KNOWN	AC098973.1	1	2	-0.042101
chr3	27997210	28028604	28012907	ENSG00000235493.1	-	lincRNA	KNOWN	AC092415.1	2	3	-0.330987
chr3	28241584	28325142	28283363	ENSG00000187118.12	+	protein_coding	KNOWN	CMC1	11	4	-0.340183
chr3	28315003	28349127	28332065	ENSG00000163512.13	-	protein_coding	KNOWN	AZI2	14	9	-0.427318
chr3	28349146	28538122	28443634	ENSG00000206559.7	+	protein_coding	KNOWN	ZCWPW2	5	10	-0.433006
chr3	28427963	28428444	28428203	ENSG00000234048.1	-	processed_pseudogene	KNOWN	FAM96AP1	1	1	-0.757591
chr3	28447725	28448073	28447899	ENSG00000230480.1	+	processed_pseudogene	KNOWN	AC093142.2	1	1	-0.454903
chr3	28574791	28758340	28666565	ENSG00000228214.6	+	antisense	KNOWN	LINC00693	3	5	-0.485278
chr3	29011242	29011336	29011289	ENSG00000238470.1	+	miRNA	NOVEL	AC097361.1	1	1	-0.807314
chr3	29087396	29088599	29087997	ENSG00000215004.3	+	processed_pseudogene	KNOWN	MESTP4	1	1	-0.296573
chr3	29264194	29290726	29277460	ENSG00000235904.1	-	antisense	KNOWN	RBMS3-AS3	1	2	-0.280649
chr3	29280982	30010391	29645686	ENSG00000144642.20	+	protein_coding	KNOWN	RBMS3	13	15	-0.273211
chr3	29369337	29369421	29369379	ENSG00000216169.1	-	miRNA	NOVEL	AC098650.1	1	1	-0.422581
chr3	29390848	29391218	29391033	ENSG00000226216.1	+	processed_pseudogene	KNOWN	RPS12P5	1	1	-0.179813
chr3	29526251	29642809	29584530	ENSG00000203506.5	-	antisense	KNOWN	RBMS3-AS2	7	5	-0.199213
chr3	29797652	29797825	29797738	ENSG00000227795.1	-	processed_pseudogene	KNOWN	MTND4LP9	1	1	-0.588018
chr3	29926811	29934156	29930483	ENSG00000235593.1	-	antisense	KNOWN	RBMS3-AS1	1	3	-0.534936
chr3	30138248	30138315	30138281	ENSG00000264178.1	+	miRNA	NOVEL	AC137674.1	1	1	-0.139334
chr3	30138960	30139033	30138996	ENSG00000266546.1	-	miRNA	NOVEL	AC137674.2	1	1	-0.139334
chr3	30304320	30304536	30304428	ENSG00000199927.2	-	snoRNA	NOVEL	ACEA_U3	1	1	-0.176114
chr3	30304321	30304536	30304428	ENSG00000281710.1	-	snoRNA	NOVEL	U3	1	1	-0.176114
chr3	30524745	30527185	30525965	ENSG00000227260.1	+	lincRNA	KNOWN	AC116035.1	1	2	0.010462
chr3	30524990	30526213	30525601	ENSG00000227549.1	-	lincRNA	KNOWN	AC116035.2	1	2	0.010462
chr3	30606502	30694142	30650322	ENSG00000163513.17	+	protein_coding	KNOWN	TGFBR2	2	8	0.103079
chr3	30626423	30626797	30626610	ENSG00000224618.1	-	processed_pseudogene	KNOWN	AC096921.2	1	1	0.243110
chr3	30697661	30699576	30698618	ENSG00000261468.1	+	sense_overlapping	KNOWN	RP11-1024P17.1	1	1	0.047369
chr3	30726200	30894765	30810482	ENSG00000144644.14	-	protein_coding	KNOWN	GADL1	3	15	-0.299934
chr3	31161704	31161787	31161745	ENSG00000265376.1	-	miRNA	KNOWN	MIR466	1	1	-0.070280
chr3	31181751	31182650	31182200	ENSG00000213854.3	-	processed_pseudogene	KNOWN	CNN2P6	1	1	-0.025660
chr3	31228715	31228847	31228781	ENSG00000222983.1	+	rRNA	KNOWN	RNA5SP127	1	1	-0.079961
chr3	31269007	31269406	31269206	ENSG00000230111.1	+	processed_pseudogene	KNOWN	AC115283.1	1	1	-0.169636
chr3	31452832	31455894	31454363	ENSG00000227339.1	+	processed_pseudogene	KNOWN	THRAP3P1	1	2	-0.251963
chr3	31532638	31637622	31585130	ENSG00000163527.9	+	protein_coding	KNOWN	STT3B	7	16	-0.312528
chr3	31657890	32077580	31867735	ENSG00000144645.13	-	protein_coding	KNOWN	OSBPL10	18	12	-0.030345
chr3	31704058	31721652	31712855	ENSG00000232490.6	+	antisense	KNOWN	OSBPL10-AS1	8	5	0.099325
chr3	31794470	31796175	31795322	ENSG00000223965.2	+	processed_pseudogene	KNOWN	ZNF587P1	1	2	0.022867
chr3	31981771	31991628	31986699	ENSG00000197385.5	+	protein_coding	KNOWN	ZNF860	2	3	-0.003452
chr3	32001682	32001779	32001730	ENSG00000281372.1	+	miRNA	NOVEL	AC108485.1	1	1	-0.214897
chr3	32030196	32030678	32030437	ENSG00000235670.1	+	processed_pseudogene	KNOWN	RPL21P40	1	1	-0.293298
chr3	32037526	32037653	32037589	ENSG00000201701.1	+	snoRNA	NOVEL	SNORA25	1	1	-0.293298
chr3	32045873	32045979	32045926	ENSG00000252398.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.293298
chr3	32063974	32066611	32065292	ENSG00000251590.1	-	unprocessed_pseudogene	KNOWN	NIFKP7	1	4	-0.123986
chr3	32105689	32168713	32137201	ENSG00000152642.10	+	protein_coding	KNOWN	GPD1L	7	8	-0.027238
chr3	32151083	32151895	32151489	ENSG00000236732.1	-	unprocessed_pseudogene	KNOWN	AC094019.4	1	2	-0.013803
chr3	32190747	32191627	32191187	ENSG00000237433.1	+	processed_pseudogene	KNOWN	RPSAP11	1	1	-0.044745
chr3	32236688	32238578	32237633	ENSG00000261572.1	-	sense_intronic	KNOWN	RP11-384L8.1	1	1	-0.103795
chr3	32238679	32370325	32304502	ENSG00000170293.8	+	protein_coding	KNOWN	CMTM8	2	4	-0.048719
chr3	32243847	32244018	32243932	ENSG00000270377.1	-	processed_pseudogene	KNOWN	RP11-384L8.2	1	1	-0.103795
chr3	32258940	32260230	32259585	ENSG00000234737.1	+	processed_pseudogene	KNOWN	KRT18P15	1	1	-0.042309
chr3	32259728	32259819	32259773	ENSG00000207857.2	+	miRNA	NOVEL	AC097639.1	1	1	-0.042309
chr3	32391671	32483067	32437369	ENSG00000153551.13	+	protein_coding	KNOWN	CMTM7	6	5	0.088436
chr3	32481312	32503408	32492360	ENSG00000091317.7	-	protein_coding	KNOWN	CMTM6	3	4	0.064204
chr3	32506283	32506389	32506336	ENSG00000276147.1	-	miRNA	KNOWN	MIR548AY	1	1	-0.099374
chr3	32507955	32508325	32508140	ENSG00000213849.3	+	processed_pseudogene	KNOWN	AC104306.1	1	1	-0.099374
chr3	32515726	32515820	32515773	ENSG00000264135.1	+	miRNA	NOVEL	AC104306.2	1	1	-0.157036
chr3	32525971	32570874	32548422	ENSG00000144635.8	-	protein_coding	KNOWN	DYNC1LI1	8	13	-0.166839
chr3	32592972	32593312	32593142	ENSG00000226955.1	-	processed_pseudogene	KNOWN	AC104306.4	1	1	0.013040
chr3	32620903	32621902	32621402	ENSG00000231552.1	-	processed_pseudogene	KNOWN	IGBP1P3	1	1	-0.131783
chr3	32635222	32635554	32635388	ENSG00000237676.1	-	processed_pseudogene	KNOWN	RPL30P4	1	1	-0.010819
chr3	32685145	32773875	32729510	ENSG00000182973.18	+	protein_coding	KNOWN	CNOT10	19	19	0.087823
chr3	32730635	32737454	32734044	ENSG00000251224.1	-	antisense	KNOWN	CNOT10-AS1	1	2	0.178927
chr3	32752910	32753901	32753405	ENSG00000213842.2	+	processed_pseudogene	KNOWN	SUGT1P2	1	1	-0.059126
chr3	32785646	32786116	32785881	ENSG00000227337.1	+	processed_pseudogene	KNOWN	RPL23AP43	1	1	0.310490
chr3	32818018	32897826	32857922	ENSG00000206557.5	+	protein_coding	KNOWN	TRIM71	1	4	0.109240
chr3	32951574	32956349	32953961	ENSG00000183813.6	+	protein_coding	KNOWN	CCR4	1	2	0.058044
chr3	32996608	33097230	33046919	ENSG00000170266.15	-	protein_coding	KNOWN	GLB1	19	16	0.162638
chr3	33033863	33034810	33034336	ENSG00000223899.1	+	processed_pseudogene	KNOWN	SEC13P1	1	1	0.222191
chr3	33077204	33077491	33077347	ENSG00000235424.1	+	processed_pseudogene	KNOWN	SUMO2P10	1	1	0.230890
chr3	33090421	33096801	33093611	ENSG00000188167.8	-	protein_coding	KNOWN	TMPPE	2	2	0.256623
chr3	33103008	33103306	33103157	ENSG00000275090.1	+	misc_RNA	KNOWN	RN7SL296P	1	1	0.256623
chr3	33113979	33147773	33130876	ENSG00000170275.14	+	protein_coding	KNOWN	CRTAP	3	7	0.295161
chr3	33144104	33147721	33145912	ENSG00000272149.1	-	antisense	KNOWN	RP11-627J17.1	1	2	0.051803
chr3	33150042	33219215	33184628	ENSG00000173705.8	-	protein_coding	KNOWN	SUSD5	2	5	0.149519
chr3	33190233	33190328	33190280	ENSG00000230119.1	-	processed_pseudogene	KNOWN	AC123900.2	1	1	0.200141
chr3	33277025	33403662	33340343	ENSG00000153558.13	+	protein_coding	KNOWN	FBXL2	22	17	-0.061529
chr3	33388336	33441371	33414853	ENSG00000153560.11	-	protein_coding	KNOWN	UBP1	13	17	0.115767
chr3	33414150	33414211	33414180	ENSG00000252700.1	+	snRNA	KNOWN	RNU7-110P	1	1	0.054024
chr3	33491983	33492098	33492040	ENSG00000202175.1	-	rRNA	KNOWN	RNA5SP128	1	1	-0.150284
chr3	33496245	33718356	33607300	ENSG00000163539.16	-	protein_coding	KNOWN	CLASP2	25	40	-0.041111
chr3	33554636	33554859	33554747	ENSG00000238008.1	+	processed_pseudogene	KNOWN	COX6CP10	1	1	-0.104405
chr3	33727250	33727604	33727427	ENSG00000228112.1	-	processed_pseudogene	KNOWN	AC112220.2	1	1	0.046763
chr3	33771963	33772295	33772129	ENSG00000227707.1	+	processed_pseudogene	KNOWN	SDAD1P3	1	1	0.083430
chr3	33793644	33794145	33793894	ENSG00000271324.1	-	lincRNA	KNOWN	RP11-10C24.2	1	1	0.181934
chr3	33795688	33796950	33796319	ENSG00000271643.1	-	lincRNA	KNOWN	RP11-10C24.3	1	1	0.181934
chr3	33797149	33797681	33797415	ENSG00000271020.1	-	lincRNA	KNOWN	RP11-10C24.1	1	1	0.181934
chr3	33798352	33869707	33834029	ENSG00000170248.13	+	protein_coding	KNOWN	PDCD6IP	17	18	0.097731
chr3	34159334	34562877	34361105	ENSG00000226320.5	+	lincRNA	KNOWN	AC018359.1	2	8	-0.377059
chr3	34203244	34268811	34236027	ENSG00000236452.1	+	lincRNA	KNOWN	AC123023.1	1	2	-0.384067
chr3	34524818	34543880	34534349	ENSG00000227498.2	-	lincRNA	KNOWN	AC018359.3	1	3	-0.440675
chr3	34872641	34873854	34873247	ENSG00000235534.1	+	processed_pseudogene	KNOWN	FECHP1	1	1	-0.323046
chr3	35215705	35217149	35216427	ENSG00000228767.1	-	processed_pseudogene	KNOWN	KRT8P18	1	1	-0.759685
chr3	35256840	35256946	35256893	ENSG00000212442.1	-	snRNA	KNOWN	RNU6-243P	1	1	-0.296411
chr3	35638945	35794496	35716720	ENSG00000172995.16	+	protein_coding	KNOWN	ARPP21	35	20	-0.423509
chr3	35650197	35651961	35651079	ENSG00000230830.1	-	antisense	KNOWN	ARPP21-AS1	1	2	-0.684233
chr3	35744476	35744559	35744517	ENSG00000207625.1	+	miRNA	KNOWN	MIR128-2	1	1	-0.358923
chr3	35871866	35872198	35872032	ENSG00000226489.1	+	processed_pseudogene	KNOWN	AC104308.2	1	1	-0.382788
chr3	36169767	36170448	36170107	ENSG00000236158.1	-	processed_pseudogene	KNOWN	RFC3P1	1	1	-0.299313
chr3	36380344	36548007	36464175	ENSG00000144681.10	+	protein_coding	KNOWN	STAC	8	11	-0.203122
chr3	36616006	36637457	36626731	ENSG00000231382.1	-	unprocessed_pseudogene	KNOWN	NBPF21P	1	9	0.147351
chr3	36685040	36685369	36685204	ENSG00000201315.1	+	misc_RNA	KNOWN	RN7SKP227	1	1	0.185651
chr3	36712422	36739861	36726141	ENSG00000163673.6	-	protein_coding	KNOWN	DCLK3	2	5	0.001789
chr3	36767117	36784167	36775642	ENSG00000230067.3	-	transcribed_processed_pseudogene	KNOWN	HSPD1P6	2	2	-0.244327
chr3	36819276	36822498	36820887	ENSG00000279727.1	-	lincRNA	KNOWN	RP11-640L9.1	2	2	-0.255932
chr3	36823151	36825158	36824154	ENSG00000281100.1	-	TEC	KNOWN	RP11-640L9.2	1	1	-0.255932
chr3	36826820	36945057	36885938	ENSG00000168016.13	-	protein_coding	KNOWN	TRANK1	3	23	-0.062328
chr3	36880184	36880729	36880456	ENSG00000234073.1	-	processed_pseudogene	KNOWN	AC011816.1	1	1	-0.289437
chr3	36968191	36968316	36968253	ENSG00000210181.1	-	snRNA	KNOWN	RNU6ATAC4P	1	1	0.186114
chr3	36973117	36973672	36973394	ENSG00000272334.1	-	lincRNA	KNOWN	RP11-129K12.1	1	1	-0.089178
chr3	36976316	36976840	36976578	ENSG00000236165.1	+	processed_pseudogene	KNOWN	PRADC1P1	1	1	-0.089178
chr3	36985043	36993168	36989105	ENSG00000178567.7	-	protein_coding	KNOWN	EPM2AIP1	3	3	0.006183
chr3	36993332	37050918	37022125	ENSG00000076242.14	+	protein_coding	KNOWN	MLH1	23	20	0.401364
chr3	37016523	37017014	37016768	ENSG00000224858.5	-	processed_pseudogene	KNOWN	RPL29P11	1	1	0.472736
chr3	37052656	37183689	37118172	ENSG00000093167.17	-	protein_coding	KNOWN	LRRFIP2	20	28	0.108203
chr3	37093133	37093234	37093183	ENSG00000206645.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.009530
chr3	37134658	37135102	37134880	ENSG00000225558.1	+	processed_pseudogene	KNOWN	UBE2D3P2	1	1	0.199572
chr3	37140327	37140430	37140378	ENSG00000199594.1	+	snRNA	KNOWN	RNU6-1301P	1	1	0.199572
chr3	37143512	37143958	37143735	ENSG00000224080.1	-	processed_pseudogene	KNOWN	UBE2FP1	1	1	0.199572
chr3	37182107	37182734	37182420	ENSG00000271993.1	+	antisense	KNOWN	RP11-285J16.1	1	1	0.109374
chr3	37196204	37196666	37196435	ENSG00000231449.1	+	processed_pseudogene	KNOWN	AC097359.2	1	1	0.288684
chr3	37216779	37217988	37217383	ENSG00000271653.1	+	lincRNA	KNOWN	RP11-259K5.1	1	1	0.266197
chr3	37241789	37244177	37242983	ENSG00000270194.1	-	antisense	KNOWN	RP11-259K5.2	1	1	0.225743
chr3	37243177	37366751	37304964	ENSG00000144674.16	+	protein_coding	KNOWN	GOLGA4	12	24	-0.024278
chr3	37275693	37276598	37276145	ENSG00000230409.3	+	processed_pseudogene	KNOWN	TCEA1P2	1	1	-0.285710
chr3	37341649	37341766	37341707	ENSG00000222208.1	+	rRNA	KNOWN	RNA5SP129	1	1	-0.009453
chr3	37386269	37435497	37410883	ENSG00000198590.11	+	lincRNA	KNOWN	C3orf35	8	7	-0.038209
chr3	37452115	37823514	37637814	ENSG00000144668.11	+	protein_coding	KNOWN	ITGA9	4	28	0.019484
chr3	37573151	37573213	37573182	ENSG00000239105.1	-	snRNA	KNOWN	RNU7-73P	1	1	0.026774
chr3	37745432	37861780	37803606	ENSG00000235257.8	-	processed_transcript	KNOWN	ITGA9-AS1	19	6	0.169716
chr3	37748110	37748900	37748505	ENSG00000235482.1	+	processed_pseudogene	KNOWN	RPL21P135	1	1	-0.221166
chr3	37789921	37790445	37790183	ENSG00000236411.1	-	processed_pseudogene	KNOWN	NDUFAF4P3	1	1	0.207743
chr3	37861960	37984469	37923214	ENSG00000144677.14	+	protein_coding	KNOWN	CTDSPL	8	8	0.265983
chr3	37969404	37969480	37969442	ENSG00000199075.1	+	miRNA	KNOWN	MIR26A1	1	1	0.170847
chr3	37988059	38007188	37997623	ENSG00000136059.14	+	protein_coding	KNOWN	VILL	11	20	0.688799
chr3	38007496	38029762	38018629	ENSG00000187091.13	-	protein_coding	KNOWN	PLCD1	9	15	0.800809
chr3	38014568	38014669	38014618	ENSG00000200579.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.810923
chr3	38039205	38124025	38081615	ENSG00000008226.19	+	protein_coding	KNOWN	DLEC1	7	37	0.384251
chr3	38051759	38052395	38052077	ENSG00000231668.2	+	processed_pseudogene	KNOWN	PPP2R2DP1	1	1	0.322699
chr3	38103129	38137242	38120185	ENSG00000060971.17	-	protein_coding	KNOWN	ACAA1	20	13	0.392976
chr3	38125292	38125394	38125343	ENSG00000201965.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.243995
chr3	38138478	38143022	38140750	ENSG00000172936.12	+	protein_coding	KNOWN	MYD88	11	5	0.598660
chr3	38165089	38255488	38210288	ENSG00000172939.8	+	protein_coding	KNOWN	OXSR1	6	18	0.138694
chr3	38265812	38278315	38272063	ENSG00000172940.11	+	protein_coding	KNOWN	SLC22A13	2	10	0.187302
chr3	38270283	38270767	38270525	ENSG00000237982.1	-	processed_pseudogene	KNOWN	RP11-815I22.1	1	1	0.381498
chr3	38282294	38318575	38300434	ENSG00000144671.10	+	protein_coding	KNOWN	SLC22A14	4	11	0.361171
chr3	38303773	38303879	38303826	ENSG00000199514.1	-	snRNA	KNOWN	RNU6-235P	1	1	0.308803
chr3	38325237	38329070	38327153	ENSG00000230123.1	-	unprocessed_pseudogene	KNOWN	DLEC1P1	1	4	0.465035
chr3	38346760	38421348	38384054	ENSG00000093217.9	+	protein_coding	KNOWN	XYLB	5	19	0.342310
chr3	38451027	38454820	38452923	ENSG00000229589.1	-	antisense	KNOWN	ACVR2B-AS1	1	2	0.285716
chr3	38453851	38493142	38473496	ENSG00000114739.13	+	protein_coding	KNOWN	ACVR2B	3	11	0.194876
chr3	38496127	38542161	38519144	ENSG00000157036.12	+	protein_coding	KNOWN	EXOG	17	9	0.028829
chr3	38505480	38505581	38505530	ENSG00000207512.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.244801
chr3	38515448	38515830	38515639	ENSG00000230683.1	-	processed_pseudogene	KNOWN	DDTP1	1	1	-0.270578
chr3	38526802	38527325	38527063	ENSG00000232439.1	-	processed_pseudogene	KNOWN	RPL18AP7	1	1	-0.270578
chr3	38548057	38649673	38598865	ENSG00000183873.15	-	protein_coding	KNOWN	SCN5A	14	28	0.284360
chr3	38696802	38794010	38745406	ENSG00000185313.6	-	protein_coding	KNOWN	SCN10A	1	27	-0.079342
chr3	38800296	38800394	38800345	ENSG00000222719.1	-	miRNA	NOVEL	AC116038.1	1	1	-0.304667
chr3	38823902	38825302	38824602	ENSG00000231243.1	+	antisense	KNOWN	RP11-134J21.1	1	3	0.020042
chr3	38845769	38950561	38898165	ENSG00000168356.11	-	protein_coding	KNOWN	SCN11A	3	26	-0.260496
chr3	39025987	39026093	39026040	ENSG00000206708.1	+	snRNA	KNOWN	RNU6-1227P	1	1	0.198907
chr3	39051998	39096671	39074334	ENSG00000114742.13	+	protein_coding	KNOWN	WDR48	10	19	0.168815
chr3	39096659	39108363	39102511	ENSG00000114745.13	-	protein_coding	KNOWN	GORASP1	27	9	0.045944
chr3	39107704	39138903	39123303	ENSG00000168026.16	+	protein_coding	KNOWN	TTC21A	18	29	0.499447
chr3	39138206	39138266	39138236	ENSG00000276236.1	+	miRNA	KNOWN	MIR6822	1	1	0.688095
chr3	39141855	39154562	39148208	ENSG00000144655.14	-	protein_coding	KNOWN	CSRNP1	2	5	0.711342
chr3	39161270	39161520	39161395	ENSG00000214305.4	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.752834
chr3	39183210	39192596	39187903	ENSG00000168334.8	-	protein_coding	KNOWN	XIRP1	3	3	0.440990
chr3	39214199	39214672	39214435	ENSG00000215034.4	+	processed_pseudogene	KNOWN	DSTNP4	1	1	0.105999
chr3	39263494	39281735	39272614	ENSG00000168329.13	-	protein_coding	KNOWN	CX3CR1	6	2	0.227407
chr3	39285985	39287920	39286952	ENSG00000270367.1	+	processed_pseudogene	KNOWN	RP11-331G2.6	1	1	0.183288
chr3	39329706	39333511	39331608	ENSG00000179934.6	+	protein_coding	KNOWN	CCR8	2	3	-0.252166
chr3	39334979	39335939	39335459	ENSG00000228168.1	+	processed_pseudogene	KNOWN	HNRNPA1P21	1	1	-0.262439
chr3	39338129	39338879	39338504	ENSG00000238267.1	-	processed_pseudogene	KNOWN	RP11-241K18.2	1	2	-0.262439
chr3	39358545	39359922	39359233	ENSG00000223668.1	+	processed_pseudogene	KNOWN	EEF1A1P24	1	1	-0.296079
chr3	39383348	39397351	39390349	ENSG00000144659.10	+	protein_coding	KNOWN	SLC25A38	2	7	0.285588
chr3	39406689	39412542	39409615	ENSG00000168028.13	+	protein_coding	KNOWN	RPSA	9	7	0.452128
chr3	39408389	39408539	39408464	ENSG00000206760.1	+	snoRNA	KNOWN	SNORA6	1	1	0.437488
chr3	39411054	39411206	39411130	ENSG00000202363.1	+	snoRNA	KNOWN	SNORA62	1	1	0.471184
chr3	39417480	39417565	39417522	ENSG00000264724.1	+	miRNA	NOVEL	AC099332.1	1	1	0.471184
chr3	39467198	39529479	39498338	ENSG00000168314.17	+	protein_coding	KNOWN	MOBP	13	6	-0.097595
chr3	39643638	39644705	39644171	ENSG00000230757.1	+	processed_pseudogene	KNOWN	NFU1P1	1	2	-0.290342
chr3	39808914	40260321	40034617	ENSG00000170011.13	+	protein_coding	KNOWN	MYRIP	10	17	-0.184716
chr3	39970125	39970266	39970195	ENSG00000201570.1	+	snRNA	KNOWN	RNU4-56P	1	1	-0.676417
chr3	40173145	40309698	40241421	ENSG00000280739.2	-	processed_transcript	KNOWN	EIF1B-AS1	6	5	-0.070540
chr3	40209005	40209304	40209154	ENSG00000265327.2	+	misc_RNA	KNOWN	RN7SL411P	1	1	-0.189103
chr3	40238608	40238741	40238674	ENSG00000202517.1	+	snoRNA	NOVEL	SNORA64	1	1	-0.030214
chr3	40309684	40312424	40311054	ENSG00000114784.3	+	protein_coding	KNOWN	EIF1B	4	4	0.075649
chr3	40313802	40453329	40383565	ENSG00000223797.5	-	antisense	KNOWN	ENTPD3-AS1	4	5	-0.077901
chr3	40322715	40323279	40322997	ENSG00000230274.1	-	processed_pseudogene	KNOWN	PGAM1P3	1	1	0.084087
chr3	40387156	40428619	40407887	ENSG00000168032.8	+	protein_coding	KNOWN	ENTPD3	4	11	-0.077222
chr3	40457292	40468587	40462939	ENSG00000188846.13	+	protein_coding	KNOWN	RPL14	9	6	0.398831
chr3	40477113	40490236	40483674	ENSG00000177873.12	+	protein_coding	KNOWN	ZNF619	10	6	0.243235
chr3	40498891	40499003	40498947	ENSG00000199906.1	-	snRNA	KNOWN	RNU5B-2P	1	1	0.372620
chr3	40505992	40518736	40512364	ENSG00000177842.11	+	protein_coding	KNOWN	ZNF620	4	5	0.024320
chr3	40524878	40574685	40549781	ENSG00000172888.11	+	protein_coding	KNOWN	ZNF621	8	6	-0.095441
chr3	40586535	40587428	40586981	ENSG00000234067.1	-	processed_pseudogene	KNOWN	RPL5P10	1	1	-0.087117
chr3	40596207	40597494	40596850	ENSG00000226845.1	-	processed_pseudogene	KNOWN	EEF1GP3	1	1	0.211291
chr3	40603125	40605427	40604276	ENSG00000226302.1	-	lincRNA	KNOWN	RP11-528N21.1	1	2	0.211291
chr3	40699066	40699338	40699202	ENSG00000229072.1	-	processed_pseudogene	KNOWN	HMGN2P24	1	1	-0.489456
chr3	40761545	40761799	40761672	ENSG00000234287.1	+	processed_pseudogene	KNOWN	RP11-761N21.2	1	1	-0.305972
chr3	40766207	40862626	40814416	ENSG00000231873.1	+	lincRNA	KNOWN	RP11-761N21.1	1	3	-0.291492
chr3	40970541	40971578	40971059	ENSG00000233096.1	-	lincRNA	KNOWN	RP11-520A21.1	1	2	-0.079863
chr3	41162287	41168547	41165417	ENSG00000233919.1	-	lincRNA	KNOWN	RP11-372H2.1	1	4	0.049928
chr3	41189041	41189236	41189138	ENSG00000275256.1	+	processed_pseudogene	KNOWN	MRPS31P1	1	1	0.022358
chr3	41194837	41260096	41227466	ENSG00000168036.16	+	protein_coding	KNOWN	CTNNB1	15	17	0.013032
chr3	41246599	41962430	41604514	ENSG00000168038.10	-	protein_coding	KNOWN	ULK4	12	37	-0.101158
chr3	41649256	41649337	41649296	ENSG00000221337.1	+	miRNA	NOVEL	AC099537.1	1	1	-0.054850
chr3	41687868	41688033	41687950	ENSG00000252409.1	-	scaRNA	NOVEL	SCARNA21	1	1	-0.035926
chr3	41766615	41766919	41766767	ENSG00000222942.1	-	misc_RNA	KNOWN	RN7SKP58	1	1	-0.004224
chr3	41859350	41859594	41859472	ENSG00000223513.1	-	processed_pseudogene	KNOWN	ATP6V0E1P2	1	1	0.182965
chr3	41868998	41869095	41869046	ENSG00000251986.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.182965
chr3	41899111	41899253	41899182	ENSG00000212145.2	-	snoRNA	NOVEL	U8	1	1	0.010920
chr3	41955445	41955763	41955604	ENSG00000234270.1	+	processed_pseudogene	KNOWN	RPL36P20	1	1	0.038880
chr3	41977008	41978034	41977521	ENSG00000235339.1	+	processed_pseudogene	KNOWN	GEMIN2P2	1	2	0.316958
chr3	42013802	42225889	42119845	ENSG00000182606.14	+	protein_coding	KNOWN	TRAK1	10	17	0.379290
chr3	42051181	42051694	42051437	ENSG00000229339.1	-	processed_pseudogene	KNOWN	RP11-193I22.2	1	1	0.438642
chr3	42145646	42146371	42146008	ENSG00000234562.1	-	processed_pseudogene	KNOWN	TPMTP2	1	1	0.362639
chr3	42221840	42221965	42221902	ENSG00000222872.1	+	snRNA	KNOWN	RNU4-78P	1	1	0.349643
chr3	42257825	42266207	42262016	ENSG00000187094.11	-	protein_coding	KNOWN	CCK	4	5	0.100029
chr3	42264989	42266390	42265689	ENSG00000281160.1	+	antisense	KNOWN	RP11-333B11.1	1	1	0.100029
chr3	42321005	42322695	42321850	ENSG00000231280.1	+	processed_pseudogene	KNOWN	SALL4P6	1	1	-0.207568
chr3	42340588	42342367	42341477	ENSG00000229572.1	+	processed_pseudogene	KNOWN	EIF4BP4	1	1	-0.151565
chr3	42397078	42410600	42403839	ENSG00000157093.8	-	protein_coding	KNOWN	LYZL4	3	5	-0.231472
chr3	42422146	42422238	42422192	ENSG00000239181.1	-	miRNA	NOVEL	AC092048.1	1	1	0.052025
chr3	42469640	42469879	42469759	ENSG00000235787.1	+	processed_pseudogene	KNOWN	RP11-219I21.1	1	1	0.076224
chr3	42489299	42537573	42513436	ENSG00000114812.12	+	protein_coding	KNOWN	VIPR1	17	14	0.167789
chr3	42506465	42533258	42519861	ENSG00000232354.7	-	antisense	KNOWN	VIPR1-AS1	37	8	0.324343
chr3	42547969	42601080	42574524	ENSG00000093183.13	-	protein_coding	KNOWN	SEC22C	16	8	0.251483
chr3	42581840	42595114	42588477	ENSG00000008324.10	+	protein_coding	KNOWN	SS18L2	3	4	0.349285
chr3	42600614	42648741	42624677	ENSG00000114857.17	+	protein_coding	KNOWN	NKTR	19	19	0.249151
chr3	42601963	42654388	42628175	ENSG00000230084.5	-	antisense	KNOWN	RP4-613B23.1	3	5	0.287347
chr3	42653684	42665854	42659769	ENSG00000114853.13	+	protein_coding	KNOWN	ZBTB47	2	7	0.915114
chr3	42676189	42676491	42676340	ENSG00000240203.3	-	misc_RNA	KNOWN	RN7SL567P	1	1	0.856104
chr3	42685519	42692544	42689031	ENSG00000157119.11	+	protein_coding	KNOWN	KLHL40	1	6	0.759741
chr3	42692663	42702827	42697745	ENSG00000010282.14	-	protein_coding	KNOWN	HHATL	12	13	0.590111
chr3	42692663	42773253	42732958	ENSG00000244607.5	-	protein_coding	KNOWN	CCDC13	9	16	0.556232
chr3	42702653	42706776	42704714	ENSG00000230970.3	+	antisense	KNOWN	HHATL-AS1	3	3	0.590111
chr3	42732575	42746768	42739671	ENSG00000173811.10	+	antisense	KNOWN	CCDC13-AS1	2	4	0.374722
chr3	42757177	42804518	42780847	ENSG00000280571.1	-	protein_coding	KNOWN	RP4-613B23.5	1	5	0.264665
chr3	42770612	42773635	42772123	ENSG00000225611.1	+	antisense	KNOWN	RP11-70C1.1	1	2	0.213780
chr3	42784298	42804531	42794414	ENSG00000181061.13	-	protein_coding	KNOWN	HIGD1A	5	4	0.089516
chr3	42785087	42852428	42818757	ENSG00000235288.3	-	antisense	KNOWN	RP11-70C1.3	3	4	0.079290
chr3	42804752	42887974	42846363	ENSG00000144648.15	+	protein_coding	KNOWN	ACKR2	11	6	0.066194
chr3	42809414	42908105	42858759	ENSG00000273328.5	+	processed_transcript	KNOWN	RP11-141M3.6	3	5	0.032132
chr3	42809446	43055871	42932658	ENSG00000273291.5	+	protein_coding	KNOWN	RP11-136C24.3	4	6	0.017262
chr3	42809483	42942792	42876137	ENSG00000240747.7	+	protein_coding	KNOWN	KRBOX1	4	7	0.012316
chr3	42856005	42876165	42866085	ENSG00000180432.5	-	protein_coding	KNOWN	CYP8B1	2	2	0.067334
chr3	42889361	42890306	42889833	ENSG00000236459.1	+	processed_pseudogene	KNOWN	HNRNPA1P22	1	1	-0.031268
chr3	42905731	42917641	42911686	ENSG00000182983.14	+	protein_coding	KNOWN	ZNF662	5	5	0.031624
chr3	42927565	42927697	42927631	ENSG00000281085.1	-	miRNA	NOVEL	AC092043.1	1	1	0.116239
chr3	42934252	42936785	42935518	ENSG00000206552.4	-	antisense	KNOWN	KRBOX1-AS1	1	2	-0.283300
chr3	42979267	43060211	43019739	ENSG00000144649.8	+	protein_coding	KNOWN	FAM198A	5	6	0.100949
chr3	43037121	43037451	43037286	ENSG00000232375.1	+	unprocessed_pseudogene	KNOWN	RP11-136C24.1	1	1	0.008663
chr3	43079232	43106076	43092654	ENSG00000144647.5	-	protein_coding	KNOWN	POMGNT2	2	3	0.034521
chr3	43087479	43088068	43087773	ENSG00000227245.1	+	lincRNA	KNOWN	RP11-136C24.2	1	2	0.049969
chr3	43210741	43210871	43210806	ENSG00000222331.1	-	miRNA	NOVEL	AC104434.1	1	1	0.392571
chr3	43286512	43424764	43355638	ENSG00000163788.13	+	protein_coding	KNOWN	SNRK	8	8	0.011465
chr3	43314951	43315255	43315103	ENSG00000241939.3	+	misc_RNA	KNOWN	RN7SL517P	1	1	-0.355467
chr3	43346923	43347643	43347283	ENSG00000271941.1	-	antisense	KNOWN	RP11-188P20.3	1	1	-0.098439
chr3	43349644	43351962	43350803	ENSG00000234617.1	-	antisense	KNOWN	SNRK-AS1	1	3	0.182383
chr3	43354859	43691594	43523226	ENSG00000160746.12	-	protein_coding	KNOWN	ANO10	17	13	0.011603
chr3	43472477	43472596	43472536	ENSG00000251811.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.018062
chr3	43484972	43485880	43485426	ENSG00000223916.1	-	processed_pseudogene	KNOWN	RP11-353H3.1	1	2	-0.018062
chr3	43690113	43734371	43712242	ENSG00000011198.7	+	protein_coding	KNOWN	ABHD5	7	7	0.109347
chr3	43778961	43779982	43779471	ENSG00000235886.1	-	lincRNA	KNOWN	RP4-672N11.1	1	3	0.249036
chr3	43996896	43997443	43997169	ENSG00000271192.1	+	lincRNA	KNOWN	RP4-555D20.3	1	1	0.007600
chr3	43998081	43999149	43998615	ENSG00000272121.1	-	lincRNA	KNOWN	RP4-555D20.4	1	1	0.007600
chr3	44071087	44071186	44071136	ENSG00000252980.1	+	snRNA	KNOWN	RNU6-367P	1	1	0.154576
chr3	44114212	44114310	44114261	ENSG00000207954.1	+	miRNA	KNOWN	MIR138-1	1	1	0.524951
chr3	44115818	44117487	44116652	ENSG00000280435.1	-	TEC	KNOWN	RP4-555D20.1	1	1	0.524951
chr3	44117299	44122365	44119832	ENSG00000261786.1	+	lincRNA	KNOWN	RP4-555D20.2	1	1	0.524951
chr3	44241886	44332098	44286992	ENSG00000173769.4	+	protein_coding	KNOWN	TOPAZ1	1	20	-0.367531
chr3	44337941	44338552	44338246	ENSG00000271937.1	-	antisense	KNOWN	RP11-424N24.2	1	1	-0.195811
chr3	44338119	44409451	44373785	ENSG00000179152.19	+	protein_coding	KNOWN	TCAIM	12	11	-0.018977
chr3	44421130	44424007	44422568	ENSG00000225873.2	-	protein_coding	KNOWN	LINC00694	2	2	0.247270
chr3	44427977	44429529	44428753	ENSG00000283036.1	+	lincRNA	KNOWN	RP11-101C21.4	1	4	0.247270
chr3	44431720	44477670	44454695	ENSG00000185219.16	-	protein_coding	KNOWN	ZNF445	5	10	0.320468
chr3	44498970	44510640	44504805	ENSG00000178917.14	-	protein_coding	KNOWN	ZNF852	4	5	0.156629
chr3	44524744	44525805	44525274	ENSG00000214825.2	-	processed_pseudogene	KNOWN	EI24P3	1	1	0.014824
chr3	44528955	44529391	44529173	ENSG00000277509.1	-	processed_pseudogene	KNOWN	RP11-944L7.6	1	1	0.014824
chr3	44555193	44594173	44574683	ENSG00000196345.12	+	protein_coding	KNOWN	ZKSCAN7	8	6	0.009228
chr3	44557357	44685653	44621505	ENSG00000236869.1	-	antisense	KNOWN	RP11-944L7.4	1	3	0.005364
chr3	44578223	44599694	44588958	ENSG00000144792.9	+	protein_coding	KNOWN	ZNF660	4	4	-0.087597
chr3	44579938	44581026	44580482	ENSG00000214820.3	-	processed_pseudogene	KNOWN	MPRIPP1	1	1	0.084687
chr3	44584888	44648471	44616679	ENSG00000186448.14	+	protein_coding	KNOWN	ZNF197	6	7	-0.123766
chr3	44617128	44624797	44620962	ENSG00000233509.2	-	antisense	KNOWN	ZNF197-AS1	1	2	-0.286520
chr3	44629284	44629372	44629328	ENSG00000280942.1	+	miRNA	NOVEL	AC099669.1	1	1	-0.286520
chr3	44648727	44660791	44654759	ENSG00000169981.10	+	protein_coding	KNOWN	ZNF35	6	4	0.137454
chr3	44667412	44669364	44668388	ENSG00000272077.1	+	lincRNA	KNOWN	RP11-348P10.2	1	1	0.132181
chr3	44709311	44710886	44710098	ENSG00000235805.1	-	processed_pseudogene	KNOWN	SOCS5P3	1	1	-0.196334
chr3	44712643	44723831	44718237	ENSG00000196653.11	+	protein_coding	KNOWN	ZNF502	4	4	-0.239990
chr3	44729596	44737083	44733339	ENSG00000186446.11	+	protein_coding	KNOWN	ZNF501	5	3	-0.280390
chr3	44737661	44761662	44749661	ENSG00000163807.5	-	protein_coding	KNOWN	KIAA1143	2	4	-0.251709
chr3	44761717	44873376	44817546	ENSG00000163808.16	+	protein_coding	KNOWN	KIF15	7	35	0.020833
chr3	44793015	44793105	44793060	ENSG00000238958.1	-	miRNA	NOVEL	AC098649.1	1	1	-0.041760
chr3	44861869	44865670	44863769	ENSG00000169964.5	+	protein_coding	KNOWN	TMEM42	2	3	0.023279
chr3	44861888	44861981	44861934	ENSG00000207783.1	+	miRNA	KNOWN	MIR564	1	1	0.023279
chr3	44874608	44914990	44894799	ENSG00000163810.11	+	protein_coding	KNOWN	TGM4	6	14	0.445920
chr3	44899178	44900925	44900051	ENSG00000235845.1	+	antisense	KNOWN	RP11-272D20.2	1	2	0.543099
chr3	44915257	44976185	44945721	ENSG00000163812.13	-	protein_coding	KNOWN	ZDHHC3	11	8	0.420778
chr3	44937673	44938482	44938077	ENSG00000227123.1	+	processed_pseudogene	KNOWN	RPL12P44	1	2	0.604104
chr3	44975241	45036066	45005653	ENSG00000075914.12	+	protein_coding	KNOWN	EXOSC7	11	9	0.394394
chr3	45001548	45036071	45018809	ENSG00000163815.5	+	protein_coding	KNOWN	CLEC3B	3	3	0.403407
chr3	45034474	45034588	45034531	ENSG00000252410.1	-	snRNA	KNOWN	RNU5B-3P	1	1	0.798261
chr3	45082278	45146422	45114350	ENSG00000163814.7	-	protein_coding	KNOWN	CDCP1	3	9	0.368277
chr3	45159774	45160175	45159974	ENSG00000224094.1	-	processed_pseudogene	KNOWN	RPS24P8	1	1	0.305296
chr3	45224466	45226278	45225372	ENSG00000249992.1	-	protein_coding	KNOWN	TMEM158	1	1	0.356149
chr3	45255409	45255620	45255514	ENSG00000202268.2	-	snoRNA	NOVEL	U3	1	1	0.091992
chr3	45388506	45549421	45468963	ENSG00000011376.9	+	protein_coding	KNOWN	LARS2	8	22	0.168990
chr3	45483974	45509545	45496759	ENSG00000232455.2	-	antisense	KNOWN	LARS2-AS1	1	4	0.400432
chr3	45555394	45686338	45620866	ENSG00000144791.9	+	protein_coding	KNOWN	LIMD1	4	8	0.499514
chr3	45592255	45592327	45592291	ENSG00000251927.1	+	miRNA	NOVEL	AC099539.1	1	1	0.427176
chr3	45679043	45689134	45684088	ENSG00000230530.1	-	antisense	KNOWN	LIMD1-AS1	2	2	0.300309
chr3	45689056	45745424	45717240	ENSG00000211456.10	+	protein_coding	KNOWN	SACM1L	15	21	0.268732
chr3	45742675	45742970	45742822	ENSG00000244357.3	+	misc_RNA	KNOWN	RN7SL145P	1	1	-0.111542
chr3	45749627	45750651	45750139	ENSG00000279017.1	+	TEC	KNOWN	RP11-697K23.3	1	1	0.031729
chr3	45755450	45796535	45775992	ENSG00000163817.15	-	protein_coding	KNOWN	SLC6A20	7	12	0.374912
chr3	45823316	45916042	45869679	ENSG00000163818.16	-	protein_coding	KNOWN	LZTFL1	16	12	0.197648
chr3	45883640	45884113	45883876	ENSG00000236930.1	-	processed_pseudogene	KNOWN	RP11-852E15.1	1	1	-0.003165
chr3	45886504	45903177	45894840	ENSG00000173585.15	+	protein_coding	KNOWN	CCR9	5	4	0.284253
chr3	45903187	45903298	45903242	ENSG00000201635.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.360481
chr3	45917899	45995824	45956861	ENSG00000163820.14	-	protein_coding	KNOWN	FYCO1	5	19	0.393858
chr3	45940933	45948353	45944643	ENSG00000172215.5	+	protein_coding	KNOWN	CXCR6	4	2	0.487577
chr3	46017024	46027742	46022383	ENSG00000173578.7	-	protein_coding	KNOWN	XCR1	2	3	0.216843
chr3	46023296	46024156	46023726	ENSG00000226933.1	+	processed_pseudogene	KNOWN	NRBF2P2	1	1	0.216843
chr3	46142358	46143677	46143017	ENSG00000229515.1	-	processed_pseudogene	KNOWN	FLT1P1	1	1	0.083628
chr3	46163604	46266706	46215155	ENSG00000183625.14	+	protein_coding	KNOWN	CCR3	8	4	0.012627
chr3	46201709	46208396	46205052	ENSG00000163823.3	-	protein_coding	KNOWN	CCR1	1	2	0.015371
chr3	46310591	46311922	46311256	ENSG00000236736.1	-	processed_pseudogene	KNOWN	UQCRC2P1	1	1	-0.401548
chr3	46353734	46360928	46357331	ENSG00000121807.5	+	protein_coding	KNOWN	CCR2	5	3	-0.040315
chr3	46364955	46407059	46386007	ENSG00000223552.1	-	antisense	KNOWN	RP11-24F11.2	1	4	0.130512
chr3	46370854	46376206	46373530	ENSG00000160791.13	+	protein_coding	KNOWN	CCR5	2	2	0.083580
chr3	46407163	46412997	46410080	ENSG00000121797.9	+	protein_coding	KNOWN	CCRL2	7	3	0.196504
chr3	46435645	46485234	46460439	ENSG00000012223.12	-	protein_coding	KNOWN	LTF	9	20	0.230298
chr3	46497491	46500949	46499220	ENSG00000163825.3	+	protein_coding	KNOWN	RTP3	1	2	0.497405
chr3	46515423	46580099	46547761	ENSG00000163827.12	-	protein_coding	KNOWN	LRRC2	4	9	0.322760
chr3	46550506	46550557	46550531	ENSG00000264306.1	-	miRNA	NOVEL	AC104304.1	1	1	0.417392
chr3	46557398	46559694	46558546	ENSG00000268324.2	+	antisense	KNOWN	LRRC2-AS1	2	3	0.417392
chr3	46574555	46626543	46600549	ENSG00000241186.7	+	protein_coding	KNOWN	TDGF1	7	6	0.115097
chr3	46650510	46650590	46650550	ENSG00000251967.1	+	snoRNA	NOVEL	SNORD77	1	1	0.128704
chr3	46668997	46693704	46681350	ENSG00000178038.16	-	protein_coding	KNOWN	ALS2CL	10	26	0.899190
chr3	46701333	46710886	46706109	ENSG00000181585.3	+	protein_coding	KNOWN	TMIE	1	4	0.852180
chr3	46712116	46812574	46762345	ENSG00000206549.12	-	protein_coding	KNOWN	PRSS50	2	11	0.125813
chr3	46719583	46736429	46728006	ENSG00000261603.1	-	protein_coding	KNOWN	PRSS46	1	4	0.742400
chr3	46742092	46812558	46777325	ENSG00000188086.12	-	protein_coding	KNOWN	PRSS45	3	10	-0.131311
chr3	46798123	46798390	46798256	ENSG00000238013.1	+	processed_pseudogene	KNOWN	RP11-427P5.2	1	1	-0.437261
chr3	46809359	46812558	46810958	ENSG00000226074.4	-	transcribed_unprocessed_pseudogene	KNOWN	PRSS44	2	5	0.170190
chr3	46829542	46834095	46831818	ENSG00000178055.11	-	protein_coding	KNOWN	PRSS42	2	5	0.082559
chr3	46857872	46882169	46870020	ENSG00000160808.9	-	protein_coding	KNOWN	MYL3	3	7	0.889983
chr3	46877746	46903799	46890772	ENSG00000160801.13	+	protein_coding	KNOWN	PTH1R	8	16	0.804633
chr3	46918807	46918935	46918871	ENSG00000273682.1	-	processed_pseudogene	KNOWN	RP11-427P5.3	1	1	0.596464
chr3	46921726	46982010	46951868	ENSG00000160799.11	-	protein_coding	KNOWN	CCDC12	13	9	0.795613
chr3	46979683	47009703	46994693	ENSG00000160796.16	+	protein_coding	KNOWN	NBEAL2	11	54	1.150446
chr3	47011542	47013146	47012344	ENSG00000236409.1	+	unitary_pseudogene	KNOWN	NRADDP	1	4	0.934752
chr3	47016429	47163967	47090198	ENSG00000181555.19	-	protein_coding	KNOWN	SETD2	8	21	0.295385
chr3	47028855	47029030	47028942	ENSG00000275940.1	+	processed_pseudogene	KNOWN	MRPL57P3	1	1	0.934752
chr3	47164497	47246601	47205549	ENSG00000227398.3	+	antisense	KNOWN	KIF9-AS1	1	7	0.514898
chr3	47228026	47283451	47255738	ENSG00000088727.12	-	protein_coding	KNOWN	KIF9	13	22	0.619504
chr3	47250523	47250626	47250574	ENSG00000239128.1	-	snoRNA	KNOWN	SNORD13P3	1	1	0.449885
chr3	47282917	47346816	47314866	ENSG00000114648.11	+	protein_coding	KNOWN	KLHL18	6	10	0.624570
chr3	47346950	47349073	47348011	ENSG00000280173.1	+	TEC	KNOWN	RP11-447D11.3	1	1	0.554619
chr3	47379089	47380999	47380044	ENSG00000260236.1	-	antisense	KNOWN	RP11-708J19.1	1	1	0.819912
chr3	47381011	47413441	47397226	ENSG00000076201.14	+	protein_coding	KNOWN	PTPN23	6	25	0.758617
chr3	47413694	47477126	47445410	ENSG00000114650.18	-	protein_coding	KNOWN	SCAP	15	23	0.897517
chr3	47469777	47469987	47469882	ENSG00000276925.1	+	processed_pseudogene	KNOWN	RP11-708J19.3	1	1	0.593965
chr3	47495640	47513761	47504700	ENSG00000163832.15	-	protein_coding	KNOWN	ELP6	15	7	0.967475
chr3	47499841	47500407	47500124	ENSG00000271161.1	+	transcribed_processed_pseudogene	KNOWN	BOLA2P2	2	1	1.027383
chr3	47501083	47501182	47501132	ENSG00000280667.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.027383
chr3	47540014	47540100	47540057	ENSG00000266443.1	-	miRNA	NOVEL	AC099778.1	1	1	0.693828
chr3	47560229	47560524	47560376	ENSG00000244732.3	-	misc_RNA	KNOWN	RN7SL870P	1	1	0.501006
chr3	47562239	47580792	47571515	ENSG00000114646.9	-	protein_coding	KNOWN	CSPG5	5	5	0.399042
chr3	47585272	47782106	47683689	ENSG00000173473.10	-	protein_coding	KNOWN	SMARCC1	8	28	0.426845
chr3	47601715	47604677	47603196	ENSG00000214773.1	-	sense_intronic	KNOWN	RP11-717D12.1	1	2	0.542469
chr3	47663626	47663934	47663780	ENSG00000235695.1	+	processed_pseudogene	KNOWN	RP11-395P16.1	1	1	-0.027061
chr3	47769111	47769211	47769161	ENSG00000266457.1	+	miRNA	NOVEL	AC026318.1	1	1	0.328226
chr3	47802909	47850195	47826552	ENSG00000132153.14	+	protein_coding	KNOWN	DHX30	15	23	0.781809
chr3	47818005	47818128	47818066	ENSG00000274420.1	+	misc_RNA	NOVEL	uc_338	1	1	0.811540
chr3	47849555	47849629	47849592	ENSG00000221585.1	+	miRNA	KNOWN	MIR1226	1	1	0.764589
chr3	47850690	48089272	47969981	ENSG00000047849.21	-	protein_coding	KNOWN	MAP4	16	21	0.671913
chr3	47931808	47931914	47931861	ENSG00000199591.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.432579
chr3	47960327	47961081	47960704	ENSG00000224895.1	-	processed_pseudogene	KNOWN	VPS26BP1	1	1	0.717433
chr3	48039267	48039490	48039378	ENSG00000270285.1	+	processed_pseudogene	KNOWN	RP11-1029M24.4	1	1	0.943469
chr3	48094801	48094876	48094838	ENSG00000281068.1	-	miRNA	NOVEL	AC124916.1	1	1	0.526395
chr3	48094801	48095105	48094953	ENSG00000265078.2	-	misc_RNA	KNOWN	RN7SL664P	1	1	0.526395
chr3	48094888	48094957	48094922	ENSG00000281238.1	-	miRNA	NOVEL	AC124916.2	1	1	0.526395
chr3	48120669	48121215	48120942	ENSG00000236768.1	-	processed_pseudogene	KNOWN	RP11-1029M24.1	1	1	0.343864
chr3	48157146	48188402	48172774	ENSG00000164045.11	-	protein_coding	KNOWN	CDC25A	5	15	0.794976
chr3	48161176	48161417	48161296	ENSG00000235627.1	+	processed_pseudogene	KNOWN	SNRPFP4	1	1	1.061186
chr3	48180328	48180389	48180358	ENSG00000253056.1	+	snRNA	KNOWN	RNU7-128P	1	1	0.609050
chr3	48181547	48181726	48181636	ENSG00000231884.1	+	processed_pseudogene	KNOWN	NDUFB1P1	1	1	0.609050
chr3	48196564	48196616	48196590	ENSG00000265483.1	+	miRNA	KNOWN	MIR4443	1	1	0.762575
chr3	48223347	48225491	48224419	ENSG00000164047.4	+	protein_coding	KNOWN	CAMP	1	4	0.736727
chr3	48241100	48299253	48270176	ENSG00000164048.13	+	protein_coding	KNOWN	ZNF589	7	6	0.746274
chr3	48256350	48256938	48256644	ENSG00000229759.1	-	processed_pseudogene	KNOWN	MRPS18AP1	1	1	0.758382
chr3	48288587	48288694	48288640	ENSG00000199476.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.731110
chr3	48290793	48291375	48291084	ENSG00000228638.1	-	processed_pseudogene	KNOWN	FCF1P2	1	1	0.699674
chr3	48293264	48301685	48297474	ENSG00000172113.8	-	protein_coding	KNOWN	NME6	19	7	0.699674
chr3	48306842	48328341	48317591	ENSG00000229453.2	-	protein_coding	KNOWN	SPINK8	1	5	0.739040
chr3	48316360	48316459	48316409	ENSG00000252466.1	-	miRNA	KNOWN	MIR2115	1	1	0.745816
chr3	48372219	48401259	48386739	ENSG00000164049.14	+	protein_coding	KNOWN	FBXW12	6	11	0.630252
chr3	48379834	48380132	48379983	ENSG00000277483.1	+	misc_RNA	KNOWN	RN7SL321P	1	1	0.547671
chr3	48403854	48430051	48416952	ENSG00000164050.12	-	protein_coding	KNOWN	PLXNB1	19	38	1.159921
chr3	48432164	48440456	48436310	ENSG00000164051.13	-	protein_coding	KNOWN	CCDC51	6	4	1.159455
chr3	48440257	48444208	48442232	ENSG00000232112.3	+	protein_coding	KNOWN	TMA7	3	4	1.159455
chr3	48440352	48446656	48443504	ENSG00000244380.1	-	antisense	KNOWN	RP11-24C3.2	2	3	1.159455
chr3	48446710	48465716	48456213	ENSG00000164053.18	+	protein_coding	KNOWN	ATRIP	6	13	1.008173
chr3	48446710	48467645	48457177	ENSG00000282827.1	+	protein_coding	KNOWN	ATRIP	5	16	1.005256
chr3	48465811	48467645	48466728	ENSG00000213689.10	+	protein_coding	KNOWN	TREX1	6	4	0.976515
chr3	48467798	48504826	48486312	ENSG00000164054.15	-	protein_coding	KNOWN	SHISA5	20	7	0.990385
chr3	48488492	48488585	48488538	ENSG00000264209.1	-	miRNA	NOVEL	AC134772.1	1	1	1.131958
chr3	48517684	48562015	48539849	ENSG00000114268.11	-	protein_coding	KNOWN	PFKFB4	15	15	1.008809
chr3	48549961	48550021	48549991	ENSG00000278799.1	-	miRNA	KNOWN	MIR6823	1	1	1.032379
chr3	48561727	48563773	48562750	ENSG00000145040.3	-	protein_coding	KNOWN	UCN2	1	2	1.103337
chr3	48564073	48595267	48579670	ENSG00000114270.15	-	protein_coding	KNOWN	COL7A1	10	118	1.480481
chr3	48578902	48578977	48578939	ENSG00000211535.1	-	miRNA	KNOWN	MIR711	1	1	1.571160
chr3	48599002	48610976	48604989	ENSG00000010256.10	-	protein_coding	KNOWN	UQCRC1	10	13	1.503990
chr3	48620759	48621855	48621307	ENSG00000183396.3	-	protein_coding	KNOWN	TMEM89	1	2	0.868270
chr3	48625723	48635493	48630608	ENSG00000225697.10	-	protein_coding	KNOWN	SLC26A6	23	22	1.188360
chr3	48633636	48633698	48633667	ENSG00000274831.1	-	miRNA	KNOWN	MIR6824	1	1	1.437488
chr3	48636469	48662915	48649692	ENSG00000008300.14	-	protein_coding	KNOWN	CELSR3	4	35	1.430876
chr3	48644194	48644280	48644237	ENSG00000263898.1	-	miRNA	KNOWN	MIR4793	1	1	1.437488
chr3	48663776	48669174	48666475	ENSG00000228350.1	+	antisense	KNOWN	CELSR3-AS1	1	3	1.423950
chr3	48672455	48672733	48672594	ENSG00000271973.1	+	lincRNA	KNOWN	RP11-572O6.1	1	1	1.273889
chr3	48673844	48686364	48680104	ENSG00000213672.7	-	protein_coding	KNOWN	NCKIPSD	9	13	1.273889
chr3	48688003	48740353	48714178	ENSG00000068745.14	-	protein_coding	KNOWN	IP6K2	28	9	1.095524
chr3	48729731	48729798	48729764	ENSG00000274388.1	+	miRNA	NOVEL	AC141002.1	1	1	0.898016
chr3	48744597	48847846	48796221	ENSG00000114302.15	-	protein_coding	KNOWN	PRKAR2A	7	12	0.701239
chr3	48847572	48851981	48849776	ENSG00000224424.7	+	antisense	KNOWN	PRKAR2A-AS1	4	3	0.716053
chr3	48856931	48898993	48877962	ENSG00000178537.9	-	protein_coding	KNOWN	SLC25A20	4	10	0.917349
chr3	48917788	48919385	48918586	ENSG00000221883.2	-	protein_coding	KNOWN	ARIH2OS	1	1	0.926474
chr3	48918821	48986382	48952601	ENSG00000177479.19	+	protein_coding	KNOWN	ARIH2	31	17	0.767825
chr3	48979918	48983985	48981951	ENSG00000235236.1	-	antisense	KNOWN	RP13-131K19.1	2	2	0.782307
chr3	48985049	48989988	48987518	ENSG00000223343.1	-	antisense	KNOWN	RP13-131K19.2	1	2	0.782307
chr3	48985485	48985963	48985724	ENSG00000273211.1	-	lincRNA	KNOWN	RP13-131K19.7	1	1	0.782307
chr3	48989886	49007154	48998520	ENSG00000178467.17	+	protein_coding	KNOWN	P4HTM	12	9	1.081509
chr3	49007062	49015953	49011507	ENSG00000178252.17	+	protein_coding	KNOWN	WDR6	23	6	1.263895
chr3	49015488	49022293	49018890	ENSG00000178149.16	-	protein_coding	KNOWN	DALRD3	15	12	1.352890
chr3	49020148	49020234	49020191	ENSG00000199032.1	-	miRNA	KNOWN	MIR425	1	1	1.352890
chr3	49020459	49023495	49021977	ENSG00000178057.14	+	protein_coding	KNOWN	NDUFAF3	6	5	1.352890
chr3	49020602	49020714	49020658	ENSG00000207605.2	-	miRNA	KNOWN	MIR191	1	1	1.352890
chr3	49024325	49029408	49026866	ENSG00000178035.11	-	protein_coding	KNOWN	IMPDH2	12	14	1.352890
chr3	49029316	49029706	49029511	ENSG00000272434.1	+	antisense	KNOWN	RP13-131K19.6	1	1	1.352890
chr3	49029707	49094363	49062035	ENSG00000198218.10	-	protein_coding	KNOWN	QRICH1	13	11	1.058548
chr3	49083233	49083532	49083382	ENSG00000241461.3	+	misc_RNA	KNOWN	RN7SL182P	1	1	1.106738
chr3	49095932	49105135	49100533	ENSG00000172053.15	-	protein_coding	KNOWN	QARS	47	24	0.896736
chr3	49099854	49099914	49099884	ENSG00000274888.1	-	miRNA	KNOWN	MIR6890	1	1	0.896736
chr3	49108046	49120938	49114492	ENSG00000172046.18	-	protein_coding	KNOWN	USP19	15	27	1.241081
chr3	49121114	49133118	49127116	ENSG00000172037.13	-	protein_coding	KNOWN	LAMB2	19	33	1.335828
chr3	49140086	49160851	49150468	ENSG00000270441.1	-	unprocessed_pseudogene	KNOWN	RP11-694I15.7	1	14	1.131106
chr3	49162535	49166321	49164428	ENSG00000177352.9	-	protein_coding	KNOWN	CCDC71	1	2	0.857527
chr3	49171611	49176486	49174048	ENSG00000185909.14	+	protein_coding	KNOWN	KLHDC8B	5	6	1.134484
chr3	49177632	49191858	49184745	ENSG00000236980.9	-	protein_coding	KNOWN	C3orf84	3	4	1.079360
chr3	49198428	49258104	49228266	ENSG00000173421.16	+	protein_coding	KNOWN	CCDC36	5	10	0.799030
chr3	49252129	49252264	49252196	ENSG00000270538.1	-	processed_pseudogene	KNOWN	RP11-3B7.7	1	1	1.060049
chr3	49260085	49261316	49260700	ENSG00000225399.4	+	lincRNA	KNOWN	RP11-3B7.1	2	1	1.060049
chr3	49268602	49277909	49273255	ENSG00000188315.7	-	protein_coding	KNOWN	C3orf62	4	4	0.851769
chr3	49270132	49270239	49270185	ENSG00000199546.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.814984
chr3	49274120	49274186	49274153	ENSG00000264633.1	+	miRNA	KNOWN	MIR4271	1	1	0.814984
chr3	49277831	49340712	49309271	ENSG00000114316.12	-	protein_coding	KNOWN	USP4	14	22	0.862046
chr3	49320296	49320564	49320430	ENSG00000281433.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.892851
chr3	49357176	49358600	49357888	ENSG00000233276.3	-	protein_coding	KNOWN	GPX1	4	3	0.950264
chr3	49359145	49412998	49386071	ENSG00000067560.10	-	protein_coding	KNOWN	RHOA	6	6	0.940115
chr3	49365145	49367006	49366075	ENSG00000235908.1	-	sense_intronic	KNOWN	RHOA-IT1	1	2	0.950264
chr3	49412206	49416475	49414340	ENSG00000145022.4	+	protein_coding	KNOWN	TCTA	6	3	1.091992
chr3	49416778	49422753	49419765	ENSG00000145020.14	-	protein_coding	KNOWN	AMT	22	10	1.091992
chr3	49422946	49429326	49426136	ENSG00000145029.11	-	protein_coding	KNOWN	NICN1	8	7	1.091992
chr3	49467115	49467228	49467171	ENSG00000201301.1	-	rRNA	KNOWN	RNA5SP130	1	1	0.873991
chr3	49468703	49535618	49502160	ENSG00000173402.11	+	protein_coding	KNOWN	DAG1	22	6	0.887167
chr3	49549306	49554366	49551836	ENSG00000226913.1	-	lincRNA	KNOWN	BSN-AS2	2	3	0.723627
chr3	49554489	49671545	49613017	ENSG00000164061.4	+	protein_coding	KNOWN	BSN	2	12	0.683933
chr3	49640483	49641769	49641126	ENSG00000235120.1	-	antisense	KNOWN	BSN-AS1	1	2	0.841631
chr3	49665262	49665391	49665326	ENSG00000281001.1	+	miRNA	NOVEL	AC099668.1	1	1	1.074290
chr3	49674002	49683963	49678982	ENSG00000164062.12	+	protein_coding	KNOWN	APEH	16	22	1.241022
chr3	49683947	49689501	49686724	ENSG00000173531.15	-	protein_coding	KNOWN	MST1	21	18	1.241022
chr3	49684480	49684983	49684731	ENSG00000259970.1	-	processed_transcript	KNOWN	AC099668.5	1	2	1.241022
chr3	49689499	49721529	49705514	ENSG00000164068.15	+	protein_coding	KNOWN	RNF123	14	39	1.116584
chr3	49716834	49719695	49718264	ENSG00000176020.8	-	protein_coding	KNOWN	AMIGO3	1	1	1.203997
chr3	49716844	49723951	49720397	ENSG00000173540.12	-	protein_coding	KNOWN	GMPPB	5	10	1.203997
chr3	49724294	49786542	49755418	ENSG00000176095.11	-	protein_coding	KNOWN	IP6K1	9	6	0.972402
chr3	49758483	49758656	49758569	ENSG00000239576.1	+	processed_pseudogene	KNOWN	COX6CP14	1	1	0.788800
chr3	49775285	49775614	49775449	ENSG00000244730.1	+	processed_pseudogene	KNOWN	RP13-1056D16.2	1	1	0.932869
chr3	49790732	49799835	49795283	ENSG00000187492.8	-	protein_coding	KNOWN	CDHR4	6	19	0.900595
chr3	49803254	49805030	49804142	ENSG00000185614.4	+	protein_coding	KNOWN	FAM212A	1	2	0.900595
chr3	49805207	49813946	49809576	ENSG00000182179.10	-	protein_coding	KNOWN	UBA7	11	24	1.019201
chr3	49806137	49806245	49806191	ENSG00000263506.1	-	miRNA	KNOWN	MIR5193	1	1	0.900595
chr3	49818954	49819053	49819003	ENSG00000263651.1	-	miRNA	NOVEL	AC139451.1	1	1	1.163199
chr3	49828599	49856574	49842586	ENSG00000183763.8	-	protein_coding	KNOWN	TRAIP	11	15	0.955206
chr3	49857988	49870222	49864105	ENSG00000164076.16	-	protein_coding	KNOWN	CAMKV	17	12	0.930599
chr3	49863375	49863660	49863517	ENSG00000264706.2	-	misc_RNA	KNOWN	RN7SL217P	1	1	0.930528
chr3	49863381	49863464	49863422	ENSG00000281278.1	-	miRNA	NOVEL	AC139451.2	1	1	0.930528
chr3	49873347	49877980	49875663	ENSG00000234667.1	-	unitary_pseudogene	KNOWN	ACTBP13	1	1	0.934451
chr3	49887002	49903873	49895437	ENSG00000164078.12	-	protein_coding	KNOWN	MST1R	15	20	1.283400
chr3	49899302	49903757	49901529	ENSG00000230698.1	+	antisense	KNOWN	CTD-2330K9.2	1	2	1.358778
chr3	49903845	49916937	49910391	ENSG00000228008.1	+	antisense	KNOWN	CTD-2330K9.3	3	2	1.117626
chr3	49908862	49930173	49919517	ENSG00000164077.13	-	protein_coding	KNOWN	MON1A	8	7	0.928191
chr3	49940007	50100045	50020026	ENSG00000004534.14	+	protein_coding	KNOWN	RBM6	20	21	0.657281
chr3	50088908	50119021	50103964	ENSG00000003756.16	+	protein_coding	KNOWN	RBM5	26	25	0.923084
chr3	50099603	50100988	50100295	ENSG00000281691.1	-	antisense	KNOWN	RBM5-AS1	1	1	0.947352
chr3	50116022	50156085	50136053	ENSG00000235016.1	-	antisense	KNOWN	SEMA3F-AS1	2	4	1.142107
chr3	50155045	50189075	50172060	ENSG00000001617.11	+	protein_coding	KNOWN	SEMA3F	9	19	1.292891
chr3	50173326	50173419	50173372	ENSG00000207922.1	+	miRNA	KNOWN	MIR566	1	1	1.300234
chr3	50191612	50196516	50194064	ENSG00000114349.9	+	protein_coding	KNOWN	GNAT1	5	9	1.220778
chr3	50205246	50221486	50213366	ENSG00000188338.14	+	protein_coding	KNOWN	SLC38A3	9	16	1.155161
chr3	50226292	50259355	50242823	ENSG00000114353.16	+	protein_coding	KNOWN	GNAI2	12	10	1.206174
chr3	50227436	50227490	50227463	ENSG00000275334.1	+	miRNA	KNOWN	MIR5787	1	1	1.128011
chr3	50239618	50239984	50239801	ENSG00000213600.3	+	sense_intronic	KNOWN	XXcos-LUCA16.1	1	1	1.130881
chr3	50260303	50263358	50261830	ENSG00000230454.1	+	lincRNA	KNOWN	U73166.2	3	2	1.398095
chr3	50266641	50267371	50267006	ENSG00000232352.1	-	antisense	KNOWN	SEMA3B-AS1	1	2	1.398095
chr3	50267558	50277546	50272552	ENSG00000012171.17	+	protein_coding	KNOWN	SEMA3B	16	18	1.356866
chr3	50273236	50273297	50273266	ENSG00000274596.1	+	miRNA	KNOWN	MIR6872	1	1	1.343531
chr3	50279027	50288114	50283570	ENSG00000179564.3	+	protein_coding	KNOWN	LSMEM2	1	4	1.343531
chr3	50287732	50292918	50290325	ENSG00000214706.10	-	protein_coding	KNOWN	IFRD2	15	15	1.238046
chr3	50292831	50299468	50296149	ENSG00000186792.16	-	protein_coding	KNOWN	HYAL3	7	4	1.156122
chr3	50296402	50299421	50297911	ENSG00000243477.5	-	protein_coding	KNOWN	NAT6	7	3	1.156122
chr3	50299889	50312381	50306135	ENSG00000114378.16	-	protein_coding	KNOWN	HYAL1	9	6	1.151868
chr3	50317790	50322906	50320348	ENSG00000068001.13	-	protein_coding	KNOWN	HYAL2	10	5	1.133812
chr3	50320027	50328251	50324139	ENSG00000114383.9	-	protein_coding	KNOWN	TUSC2	6	4	1.133812
chr3	50329782	50340980	50335381	ENSG00000068028.17	-	protein_coding	KNOWN	RASSF1	10	6	1.176539
chr3	50337511	50338300	50337905	ENSG00000281358.1	+	antisense	KNOWN	RASSF1-AS1	1	1	1.177383
chr3	50341106	50345697	50343401	ENSG00000235058.1	+	antisense	KNOWN	ZMYND10-AS1	1	2	1.177383
chr3	50341110	50346852	50343981	ENSG00000004838.13	-	protein_coding	KNOWN	ZMYND10	9	12	1.177383
chr3	50347330	50351091	50349210	ENSG00000114388.12	-	protein_coding	KNOWN	NPRL2	17	11	1.143383
chr3	50350695	50358460	50354577	ENSG00000114395.10	+	protein_coding	KNOWN	CYB561D2	6	4	1.060283
chr3	50350892	50367923	50359407	ENSG00000272104.1	+	protein_coding	KNOWN	XXcos-LUCA11.5	1	4	1.060283
chr3	50354749	50359610	50357179	ENSG00000126062.3	-	protein_coding	KNOWN	TMEM115	1	2	1.060283
chr3	50362799	50504244	50433521	ENSG00000007402.11	-	protein_coding	KNOWN	CACNA2D2	8	39	0.803680
chr3	50365334	50368197	50366765	ENSG00000271858.5	+	antisense	KNOWN	CYB561D2	6	3	1.060283
chr3	50419781	50419899	50419840	ENSG00000202322.1	+	rRNA	KNOWN	RNA5SP131	1	1	0.861479
chr3	50558025	50571027	50564526	ENSG00000088543.14	-	protein_coding	KNOWN	C3orf18	11	6	1.070093
chr3	50569152	50596168	50582660	ENSG00000114735.9	+	protein_coding	KNOWN	HEMK1	7	11	1.043902
chr3	50599879	50601148	50600513	ENSG00000280382.1	-	lincRNA	KNOWN	RP11-804H8.7	1	4	0.950572
chr3	50606490	50611831	50609160	ENSG00000114737.15	-	protein_coding	KNOWN	CISH	3	4	0.890918
chr3	50611520	50649297	50630408	ENSG00000114738.10	+	protein_coding	KNOWN	MAPKAPK3	8	13	0.701889
chr3	50669989	50672048	50671018	ENSG00000273356.1	+	lincRNA	KNOWN	RP11-804H8.6	2	2	0.567985
chr3	50675080	50675163	50675121	ENSG00000272543.1	+	miRNA	KNOWN	MIR4787	1	1	0.567833
chr3	50675241	51384198	51029719	ENSG00000088538.12	+	protein_coding	KNOWN	DOCK3	1	53	-0.155431
chr3	50685551	50685791	50685671	ENSG00000228337.1	-	processed_pseudogene	KNOWN	RP11-804H8.5	1	1	0.567833
chr3	50719482	50719951	50719716	ENSG00000213587.3	-	processed_pseudogene	KNOWN	RP11-646D13.1	1	1	-0.417563
chr3	50786674	50788285	50787479	ENSG00000235278.2	-	processed_pseudogene	KNOWN	ZNF652P1	1	2	-0.572405
chr3	50876712	50877657	50877184	ENSG00000240959.1	-	processed_pseudogene	KNOWN	ST13P14	1	2	0.083480
chr3	51021667	51021779	51021723	ENSG00000281824.1	-	miRNA	NOVEL	AC144634.1	1	1	-0.442345
chr3	51385047	51389397	51387222	ENSG00000145050.15	+	protein_coding	KNOWN	MANF	4	5	0.106276
chr3	51391268	51397908	51394588	ENSG00000259956.1	+	protein_coding	KNOWN	RBM15B	1	1	0.544504
chr3	51395867	51500002	51447934	ENSG00000145041.15	-	protein_coding	KNOWN	VPRBP	3	25	0.293778
chr3	51541144	51668667	51604905	ENSG00000164080.13	+	protein_coding	KNOWN	RAD54L2	6	22	0.471657
chr3	51611438	51611562	51611500	ENSG00000221015.1	-	snRNA	KNOWN	RNU6ATAC29P	1	1	0.220822
chr3	51662693	51704323	51683508	ENSG00000164081.12	+	protein_coding	KNOWN	TEX264	16	6	0.598069
chr3	51694465	51694582	51694523	ENSG00000201595.1	-	rRNA	KNOWN	RNA5SP132	1	1	0.614413
chr3	51707070	51718613	51712841	ENSG00000164082.14	+	protein_coding	KNOWN	GRM2	8	7	0.567924
chr3	51719610	51719760	51719685	ENSG00000278290.1	+	miRNA	NOVEL	AC099050.1	1	1	0.552117
chr3	51778561	51779187	51778874	ENSG00000214686.4	-	protein_coding	KNOWN	IQCF6	1	2	0.024176
chr3	51817603	51819635	51818619	ENSG00000224792.6	+	transcribed_processed_pseudogene	KNOWN	IQCF4	5	3	0.076479
chr3	51817604	51830856	51824230	ENSG00000229972.7	+	protein_coding	KNOWN	IQCF3	9	8	0.070262
chr3	51861629	51863424	51862526	ENSG00000184345.4	+	protein_coding	KNOWN	IQCF2	2	3	0.008576
chr3	51872178	51872464	51872321	ENSG00000241789.3	+	misc_RNA	KNOWN	RN7SL504P	1	1	-0.102511
chr3	51873596	51875767	51874681	ENSG00000235455.1	+	antisense	KNOWN	IQCF5-AS1	1	3	-0.102511
chr3	51873721	51875584	51874652	ENSG00000214681.3	-	protein_coding	KNOWN	IQCF5	1	2	-0.102511
chr3	51894876	51903335	51899105	ENSG00000173389.15	-	protein_coding	KNOWN	IQCF1	2	5	-0.100653
chr3	51933430	51941941	51937685	ENSG00000114767.6	-	protein_coding	KNOWN	RRP9	1	15	0.432616
chr3	51942345	51948867	51945606	ENSG00000041880.14	+	protein_coding	KNOWN	PARP3	9	12	0.432616
chr3	51951849	51953902	51952875	ENSG00000280422.1	-	TEC	KNOWN	RP11-155D18.13	1	1	0.909338
chr3	51955314	51957504	51956409	ENSG00000180929.5	+	protein_coding	KNOWN	GPR62	1	1	0.909338
chr3	51957454	51974016	51965735	ENSG00000090097.20	-	protein_coding	KNOWN	PCBP4	19	15	0.981997
chr3	51961212	51974031	51967621	ENSG00000272762.5	-	processed_transcript	KNOWN	RP11-155D18.12	1	4	1.003563
chr3	51968510	51983409	51975959	ENSG00000114779.19	-	protein_coding	KNOWN	ABHD14B	8	6	1.178971
chr3	51971426	51981199	51976312	ENSG00000248487.8	+	protein_coding	KNOWN	ABHD14A	6	7	1.208910
chr3	51975050	51989183	51982116	ENSG00000114786.15	+	protein_coding	KNOWN	ABHD14A-ACY1	4	17	1.208910
chr3	51983340	51989197	51986268	ENSG00000243989.7	+	protein_coding	KNOWN	ACY1	11	15	1.208910
chr3	51993600	51995942	51994771	ENSG00000162244.10	-	protein_coding	KNOWN	RPL29	9	5	0.995929
chr3	52048919	52056550	52052734	ENSG00000164086.9	-	protein_coding	KNOWN	DUSP7	2	3	1.220122
chr3	52075253	52154690	52114971	ENSG00000164087.7	-	protein_coding	KNOWN	POC1A	3	11	0.881863
chr3	52193170	52194785	52193977	ENSG00000242849.2	+	processed_pseudogene	KNOWN	ALDOAP1	1	3	0.954862
chr3	52198086	52214327	52206206	ENSG00000023330.14	+	protein_coding	KNOWN	ALAS1	6	12	0.891056
chr3	52217016	52219012	52218014	ENSG00000280003.1	-	TEC	KNOWN	RP11-330H6.6	1	1	0.715428
chr3	52221080	52226163	52223621	ENSG00000239732.3	-	protein_coding	KNOWN	TLR9	1	2	0.715428
chr3	52221081	52231190	52226135	ENSG00000173366.11	-	protein_coding	KNOWN	RP11-330H6.5	2	5	0.782171
chr3	52228610	52239260	52233935	ENSG00000247596.8	-	protein_coding	KNOWN	TWF2	3	9	1.208050
chr3	52239258	52241097	52240177	ENSG00000243224.1	+	antisense	KNOWN	RP5-1157M23.2	2	2	1.281935
chr3	52245793	52250597	52248195	ENSG00000164088.17	+	protein_coding	KNOWN	PPM1M	9	10	1.245303
chr3	52254421	52288020	52271220	ENSG00000164091.11	-	protein_coding	KNOWN	WDR82	4	9	0.936379
chr3	52268267	52268377	52268322	ENSG00000199150.2	-	miRNA	KNOWN	MIRLET7G	1	1	0.987655
chr3	52287089	52293476	52290282	ENSG00000168237.17	+	protein_coding	KNOWN	GLYCTK	9	6	0.996709
chr3	52288580	52299067	52293823	ENSG00000242797.3	-	processed_transcript	KNOWN	GLYCTK-AS1	4	3	1.058284
chr3	52294219	52294308	52294263	ENSG00000207926.1	-	miRNA	KNOWN	MIR135A1	1	1	1.084297
chr3	52316319	52400491	52358405	ENSG00000114841.17	+	protein_coding	KNOWN	DNAH1	8	78	1.105516
chr3	52373652	52374882	52374267	ENSG00000239557.1	+	processed_pseudogene	KNOWN	RP11-168J18.6	1	1	1.182662
chr3	52401013	52410350	52405681	ENSG00000163930.9	-	protein_coding	KNOWN	BAP1	11	17	1.338545
chr3	52410561	52423641	52417101	ENSG00000010318.19	+	protein_coding	KNOWN	PHF7	12	12	1.069128
chr3	52433053	52445085	52439069	ENSG00000010319.6	-	protein_coding	KNOWN	SEMA3G	3	16	1.108671
chr3	52451102	52454070	52452586	ENSG00000114854.7	-	protein_coding	KNOWN	TNNC1	3	6	1.266388
chr3	52455118	52493071	52474094	ENSG00000010322.15	+	protein_coding	KNOWN	NISCH	14	22	1.204547
chr3	52495338	52524495	52509916	ENSG00000010327.10	+	protein_coding	KNOWN	STAB1	9	69	1.288938
chr3	52524385	52535054	52529719	ENSG00000168268.10	-	protein_coding	KNOWN	NT5DC2	15	14	1.119892
chr3	52534013	52579237	52556625	ENSG00000168273.7	+	protein_coding	KNOWN	SMIM4	5	3	0.699616
chr3	52545352	52685917	52615634	ENSG00000163939.18	-	protein_coding	KNOWN	PBRM1	20	30	0.490778
chr3	52551846	52551943	52551894	ENSG00000252768.1	-	snRNA	KNOWN	RNU6-856P	1	1	0.450292
chr3	52560570	52560707	52560638	ENSG00000221518.1	+	snRNA	KNOWN	RNU6ATAC16P	1	1	0.450292
chr3	52681156	52694492	52687824	ENSG00000163938.16	+	protein_coding	KNOWN	GNL3	12	15	0.581836
chr3	52688882	52688961	52688921	ENSG00000280904.1	+	snoRNA	NOVEL	SNORD19B	1	1	0.545097
chr3	52688890	52688962	52688926	ENSG00000252787.2	+	snoRNA	NOVEL	SNORD19	1	1	0.545097
chr3	52689248	52689315	52689281	ENSG00000212493.1	+	snoRNA	KNOWN	SNORD19	1	1	0.545097
chr3	52690744	52690827	52690785	ENSG00000238862.1	+	snoRNA	KNOWN	SNORD19B	1	1	0.654144
chr3	52691378	52691453	52691415	ENSG00000222345.1	+	snoRNA	NOVEL	SNORD19	1	1	0.654144
chr3	52692736	52692812	52692774	ENSG00000212452.1	+	snoRNA	KNOWN	SNORD69	1	1	0.654144
chr3	52694485	52706083	52700284	ENSG00000016864.16	-	protein_coding	KNOWN	GLT8D1	17	13	0.654144
chr3	52704955	52711146	52708050	ENSG00000114902.13	+	protein_coding	KNOWN	SPCS1	6	4	0.728953
chr3	52708449	52770949	52739699	ENSG00000114904.12	-	protein_coding	KNOWN	NEK4	7	16	0.651587
chr3	52732547	52733867	52733207	ENSG00000275956.1	+	processed_pseudogene	KNOWN	RP5-966M1.7	1	1	0.435026
chr3	52734735	52735013	52734874	ENSG00000270941.1	+	processed_pseudogene	KNOWN	RP5-966M1.5	1	1	0.435026
chr3	52753526	52754690	52754108	ENSG00000271137.1	+	processed_pseudogene	KNOWN	RP5-966M1.4	1	2	0.459297
chr3	52777592	52792068	52784830	ENSG00000055957.10	+	protein_coding	KNOWN	ITIH1	12	22	0.758658
chr3	52794768	52809009	52801888	ENSG00000162267.12	+	protein_coding	KNOWN	ITIH3	11	22	1.109065
chr3	52812975	52831479	52822227	ENSG00000055955.15	-	protein_coding	KNOWN	ITIH4	15	24	0.977504
chr3	52813282	52835729	52824505	ENSG00000243696.4	-	protein_coding	KNOWN	RP5-966M1.6	2	24	0.968322
chr3	52823935	52825314	52824624	ENSG00000239799.1	+	antisense	KNOWN	ITIH4-AS1	1	3	0.981693
chr3	52833114	52835219	52834166	ENSG00000272573.5	-	protein_coding	KNOWN	MUSTN1	2	3	0.929313
chr3	52833121	52897562	52865341	ENSG00000248592.7	-	protein_coding	KNOWN	TMEM110-MUSTN1	3	10	0.664896
chr3	52836219	52897596	52866907	ENSG00000213533.11	-	protein_coding	KNOWN	TMEM110	6	8	0.651434
chr3	52846463	52846552	52846507	ENSG00000275789.1	-	miRNA	KNOWN	MIR8064	1	1	0.929313
chr3	52848085	52848553	52848319	ENSG00000279144.1	-	TEC	KNOWN	RP11-894J14.2	1	1	0.929313
chr3	52903572	53046750	52975161	ENSG00000163935.13	-	protein_coding	KNOWN	SFMBT1	8	21	0.381675
chr3	52969119	53099453	53034286	ENSG00000272305.5	-	protein_coding	KNOWN	RP11-894J14.5	3	6	0.485614
chr3	53046166	53048122	53047144	ENSG00000280417.1	+	TEC	KNOWN	RP11-5O17.1	1	1	0.184021
chr3	53064283	53065091	53064687	ENSG00000242142.1	-	processed_pseudogene	KNOWN	SERBP1P3	1	1	0.549674
chr3	53088483	53130462	53109472	ENSG00000163933.9	-	protein_coding	KNOWN	RFT1	4	13	0.562075
chr3	53156009	53192717	53174363	ENSG00000163932.13	+	protein_coding	KNOWN	PRKCD	6	19	0.876569
chr3	53224707	53256052	53240379	ENSG00000163931.15	-	protein_coding	KNOWN	TKT	14	15	0.814518
chr3	53283428	53347610	53315519	ENSG00000272886.5	-	protein_coding	KNOWN	DCP1A	6	10	0.218630
chr3	53290640	53290751	53290695	ENSG00000274967.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.393819
chr3	53333060	53333128	53333094	ENSG00000207109.1	-	snoRNA	NOVEL	SNORD38	1	1	0.091992
chr3	53387713	53387836	53387774	ENSG00000212608.1	-	snoRNA	NOVEL	SNORA26	1	1	0.256623
chr3	53474700	53475089	53474894	ENSG00000227224.1	-	processed_pseudogene	KNOWN	RP11-72H11.1	1	1	-0.202456
chr3	53494656	53813733	53654194	ENSG00000157388.13	+	protein_coding	KNOWN	CACNA1D	7	49	0.012253
chr3	53530322	53530401	53530361	ENSG00000251987.1	-	snoRNA	NOVEL	SNORD63	1	1	-0.293899
chr3	53797764	53798019	53797891	ENSG00000271916.1	-	antisense	KNOWN	RP11-884K10.6	1	1	0.017673
chr3	53812335	53846390	53829362	ENSG00000016391.10	-	protein_coding	KNOWN	CHDH	3	9	0.397024
chr3	53846580	53865800	53856190	ENSG00000056736.9	+	protein_coding	KNOWN	IL17RB	3	11	0.289146
chr3	53858994	53861576	53860285	ENSG00000271976.1	-	antisense	KNOWN	RP11-884K10.7	1	1	0.279807
chr3	53867066	53882202	53874634	ENSG00000113812.13	-	protein_coding	KNOWN	ACTR8	6	13	0.320258
chr3	53884410	53891988	53888199	ENSG00000113811.10	-	protein_coding	KNOWN	SELK	5	6	0.251050
chr3	54047749	54048793	54048271	ENSG00000242983.1	-	processed_pseudogene	KNOWN	CABYRP1	1	1	0.045449
chr3	54122547	55074557	54598552	ENSG00000157445.14	+	protein_coding	KNOWN	CACNA2D3	12	39	-0.035662
chr3	54626215	54626646	54626430	ENSG00000229806.1	+	processed_pseudogene	KNOWN	RPS15P5	1	1	0.076310
chr3	54632122	54639857	54635989	ENSG00000265992.1	-	sense_intronic	KNOWN	ESRG	1	4	0.043898
chr3	54639681	54639748	54639714	ENSG00000276927.1	+	miRNA	NOVEL	AC092057.1	1	1	0.043898
chr3	54874605	54901255	54887930	ENSG00000243715.1	-	antisense	KNOWN	CACNA2D3-AS1	1	7	0.387914
chr3	54918237	54967088	54942662	ENSG00000144771.7	-	protein_coding	KNOWN	LRTM1	2	3	0.287412
chr3	55166910	55175732	55171321	ENSG00000239991.1	-	lincRNA	KNOWN	RP11-889D3.1	1	3	0.371170
chr3	55178172	55189214	55183693	ENSG00000243572.1	+	lincRNA	KNOWN	RP11-889D3.2	1	3	0.408965
chr3	55296200	55300738	55298469	ENSG00000240708.1	+	lincRNA	KNOWN	RP11-64C1.1	1	2	0.177299
chr3	55335462	55350915	55343188	ENSG00000242568.1	-	lincRNA	KNOWN	RP11-875H7.1	1	2	0.257085
chr3	55360443	55361829	55361136	ENSG00000242775.1	-	lincRNA	KNOWN	RP11-875H7.2	1	2	0.052282
chr3	55465715	55490539	55478127	ENSG00000114251.13	-	protein_coding	KNOWN	WNT5A	8	6	0.491871
chr3	55487699	55488308	55488003	ENSG00000244586.1	+	antisense	KNOWN	WNT5A-AS1	1	2	0.435026
chr3	55493830	55505261	55499545	ENSG00000242317.1	-	lincRNA	KNOWN	RP11-875H7.5	1	4	0.658642
chr3	55508308	56468363	55988335	ENSG00000187672.12	-	protein_coding	KNOWN	ERC2	14	19	-0.158248
chr3	55610603	55613104	55611853	ENSG00000240777.2	+	lincRNA	KNOWN	RP11-58O15.1	1	3	0.249533
chr3	55657206	55659382	55658294	ENSG00000281708.1	-	sense_intronic	KNOWN	ERC2-IT1	1	1	0.329491
chr3	55852492	55852594	55852543	ENSG00000264013.1	-	miRNA	KNOWN	MIR3938	1	1	-0.473605
chr3	56072104	56072407	56072255	ENSG00000200379.1	+	misc_RNA	KNOWN	RN7SKP45	1	1	-0.526138
chr3	56185104	56185222	56185163	ENSG00000200238.1	+	rRNA	KNOWN	RNA5SP133	1	1	-0.403966
chr3	56557161	56621818	56589489	ENSG00000180376.16	+	protein_coding	KNOWN	CCDC66	22	19	-0.108830
chr3	56620133	56683237	56651685	ENSG00000163946.13	-	protein_coding	KNOWN	FAM208A	10	24	0.056793
chr3	56727418	57079329	56903373	ENSG00000163947.11	-	protein_coding	KNOWN	ARHGEF3	15	13	0.169525
chr3	56940040	56960854	56950447	ENSG00000240198.5	+	antisense	KNOWN	ARHGEF3-AS1	2	3	0.105917
chr3	57060441	57075432	57067936	ENSG00000186451.1	+	protein_coding	KNOWN	SPATA12	1	2	0.188429
chr3	57078943	57080101	57079522	ENSG00000272202.1	+	antisense	KNOWN	RP11-157F20.3	1	1	0.304653
chr3	57089982	57170306	57130144	ENSG00000144730.16	-	protein_coding	KNOWN	IL17RD	7	14	-0.013729
chr3	57134142	57134723	57134432	ENSG00000229863.1	+	processed_pseudogene	KNOWN	RP11-157F20.1	1	1	-0.284313
chr3	57197843	57226521	57212182	ENSG00000163666.8	-	protein_coding	KNOWN	HESX1	3	4	-0.074327
chr3	57227737	57273468	57250602	ENSG00000157500.10	+	protein_coding	KNOWN	APPL1	8	22	-0.092723
chr3	57233948	57234032	57233990	ENSG00000273926.1	+	miRNA	NOVEL	AC093928.1	1	1	-0.008120
chr3	57268347	57292682	57280514	ENSG00000239388.8	-	protein_coding	KNOWN	ASB14	3	12	-0.318344
chr3	57293699	57544344	57419021	ENSG00000174844.14	-	protein_coding	KNOWN	DNAH12	9	74	-0.208789
chr3	57493667	57493780	57493723	ENSG00000212392.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.024926
chr3	57512450	57512555	57512502	ENSG00000206918.1	+	snRNA	KNOWN	RNU6-1181P	1	1	0.027861
chr3	57519669	57520010	57519839	ENSG00000239831.1	-	processed_pseudogene	KNOWN	RNF7P1	1	1	0.027861
chr3	57530345	57530967	57530656	ENSG00000237186.1	-	processed_pseudogene	KNOWN	RP11-229A12.2	1	1	-0.074658
chr3	57536252	57536358	57536305	ENSG00000202428.1	-	snRNA	KNOWN	RNU6-108P	1	1	-0.074658
chr3	57548838	57548945	57548891	ENSG00000206815.1	+	snRNA	KNOWN	RNU6-483P	1	1	-0.074658
chr3	57556276	57566844	57561560	ENSG00000174840.8	+	protein_coding	KNOWN	PDE12	2	3	0.204258
chr3	57571363	57598220	57584791	ENSG00000168374.10	-	protein_coding	KNOWN	ARF4	9	6	0.183989
chr3	57597715	57600927	57599321	ENSG00000272146.5	+	antisense	KNOWN	ARF4-AS1	3	3	0.515962
chr3	57619447	57619572	57619509	ENSG00000210841.1	+	snRNA	KNOWN	RNU6ATAC26P	1	1	0.019235
chr3	57625457	57693089	57659273	ENSG00000174839.12	-	protein_coding	KNOWN	DENND6A	6	20	0.206121
chr3	57628810	57654918	57641864	ENSG00000239801.1	+	antisense	KNOWN	DENND6A-AS1	1	2	0.163979
chr3	57693205	57696596	57694900	ENSG00000241933.1	+	lincRNA	KNOWN	RP11-755B10.3	1	2	0.309745
chr3	57755450	57929168	57842309	ENSG00000163681.14	+	protein_coding	KNOWN	SLMAP	21	22	0.218396
chr3	57800056	57801448	57800752	ENSG00000270772.1	-	processed_pseudogene	KNOWN	PDHA1P1	1	2	0.200768
chr3	57941818	57942304	57942061	ENSG00000213509.4	+	processed_pseudogene	KNOWN	PPIAP16	1	1	0.292456
chr3	58008400	58172251	58090325	ENSG00000136068.14	+	protein_coding	KNOWN	FLNB	14	47	0.586693
chr3	58162547	58170636	58166591	ENSG00000244161.1	-	antisense	KNOWN	FLNB-AS1	2	2	0.461331
chr3	58192257	58214697	58203477	ENSG00000163687.13	-	protein_coding	KNOWN	DNASE1L3	7	9	0.562222
chr3	58237506	58295693	58266599	ENSG00000163686.13	+	protein_coding	KNOWN	ABHD6	8	11	0.363635
chr3	58306247	58324695	58315471	ENSG00000163684.11	+	protein_coding	KNOWN	RPP14	6	6	0.437963
chr3	58306262	58318574	58312418	ENSG00000255154.7	+	protein_coding	KNOWN	RP11-80H18.3	7	6	0.443068
chr3	58329965	58330118	58330041	ENSG00000273493.1	+	lincRNA	KNOWN	RP11-80H18.4	1	1	0.205267
chr3	58332880	58426126	58379503	ENSG00000168297.15	+	protein_coding	KNOWN	PXK	14	19	0.358419
chr3	58379217	58379525	58379371	ENSG00000275607.1	-	processed_pseudogene	KNOWN	RP11-802O23.4	1	1	0.124969
chr3	58427630	58433857	58430743	ENSG00000168291.12	-	protein_coding	KNOWN	PDHB	10	11	0.618236
chr3	58428255	58428815	58428535	ENSG00000272182.1	+	antisense	KNOWN	RP11-802O23.3	1	1	0.673964
chr3	58490830	58491291	58491060	ENSG00000272360.1	-	lincRNA	KNOWN	RP11-359I18.5	1	1	0.415606
chr3	58492114	58502360	58497237	ENSG00000168301.12	+	protein_coding	KNOWN	KCTD6	6	4	0.415606
chr3	58505136	58537319	58521227	ENSG00000168306.12	-	protein_coding	KNOWN	ACOX2	13	15	0.244899
chr3	58511310	58511676	58511493	ENSG00000236722.1	+	processed_pseudogene	KNOWN	RP11-359I18.1	1	1	0.182965
chr3	58564117	58627610	58595863	ENSG00000168309.16	-	protein_coding	KNOWN	FAM107A	7	5	0.434772
chr3	58572744	58574319	58573531	ENSG00000243384.1	+	antisense	KNOWN	RP11-475O23.2	1	3	0.704646
chr3	58607080	58634440	58620760	ENSG00000244383.1	+	antisense	KNOWN	FAM3D-AS1	1	4	0.293862
chr3	58633946	58666848	58650397	ENSG00000198643.6	-	protein_coding	KNOWN	FAM3D	5	10	0.386652
chr3	58717365	59050084	58883724	ENSG00000163689.18	-	protein_coding	KNOWN	C3orf67	14	17	-0.193580
chr3	58824437	59019093	58921765	ENSG00000242428.5	+	antisense	KNOWN	C3orf67-AS1	4	4	-0.144056
chr3	59065150	59119509	59092329	ENSG00000243295.1	+	lincRNA	KNOWN	CTD-2185K10.1	1	2	-0.315175
chr3	59380024	59388704	59384364	ENSG00000243903.1	-	lincRNA	KNOWN	RP11-285B24.1	1	3	-0.291712
chr3	59464330	59510678	59487504	ENSG00000242545.1	-	lincRNA	KNOWN	RP11-719N22.2	1	2	-0.132416
chr3	59535863	59536415	59536139	ENSG00000241804.1	+	processed_pseudogene	KNOWN	RP11-719N22.1	1	1	-0.200790
chr3	59584169	59584445	59584307	ENSG00000277592.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.028008
chr3	59749310	61251459	60500384	ENSG00000189283.9	-	protein_coding	KNOWN	FHIT	8	10	-0.333137
chr3	60616822	60618079	60617450	ENSG00000240097.1	+	processed_pseudogene	KNOWN	RP11-641C17.4	1	1	0.161894
chr3	60617805	60617870	60617837	ENSG00000281426.1	-	miRNA	KNOWN	MIR548BB	1	1	0.161894
chr3	60690225	60690719	60690472	ENSG00000232407.3	-	processed_pseudogene	KNOWN	RP11-641C17.2	1	1	-0.225623
chr3	60730055	60730644	60730349	ENSG00000225673.3	-	processed_pseudogene	KNOWN	RP11-641C17.3	1	1	-0.088043
chr3	60732144	60732636	60732390	ENSG00000244183.1	-	processed_pseudogene	KNOWN	RP11-641C17.1	1	1	-0.088043
chr3	60856389	60856605	60856497	ENSG00000212211.2	-	snoRNA	NOVEL	U3	1	1	-0.328995
chr3	61561569	62297613	61929591	ENSG00000144724.18	+	protein_coding	KNOWN	PTPRG	9	30	-0.020157
chr3	61739127	61739229	61739178	ENSG00000252420.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.185993
chr3	61742455	61743106	61742780	ENSG00000226360.5	-	processed_pseudogene	KNOWN	RPL10AP6	1	1	-0.185993
chr3	62118300	62118510	62118405	ENSG00000252184.1	-	snRNA	KNOWN	RNU2-10P	1	1	0.189289
chr3	62124204	62124608	62124406	ENSG00000237456.3	-	processed_pseudogene	KNOWN	RP11-154D3.1	1	1	0.189289
chr3	62260865	62369330	62315097	ENSG00000241472.6	-	processed_transcript	KNOWN	PTPRG-AS1	10	6	-0.420789
chr3	62318973	62336213	62327593	ENSG00000114405.10	+	protein_coding	KNOWN	C3orf14	7	6	-0.271216
chr3	62369681	62374324	62372002	ENSG00000153266.12	-	protein_coding	KNOWN	FEZF2	3	6	0.105818
chr3	62398346	62875389	62636867	ENSG00000163618.17	-	protein_coding	KNOWN	CADPS	20	30	-0.302858
chr3	62779176	62779785	62779480	ENSG00000225662.2	-	processed_pseudogene	KNOWN	RP11-1036F1.1	1	1	-0.430574
chr3	62796124	62796419	62796271	ENSG00000244632.3	-	misc_RNA	KNOWN	RN7SL863P	1	1	-0.644974
chr3	62814382	62814491	62814436	ENSG00000252449.1	+	snRNA	KNOWN	RNU6-139P	1	1	-0.138492
chr3	62926371	62926882	62926626	ENSG00000226082.2	+	processed_pseudogene	KNOWN	RP11-24H1.1	1	1	-0.435940
chr3	62950430	63125062	63037746	ENSG00000244342.5	+	lincRNA	KNOWN	LINC00698	5	9	-0.503239
chr3	63096374	63097711	63097042	ENSG00000242841.1	-	processed_pseudogene	KNOWN	KRT8P35	1	1	-0.632035
chr3	63203218	63203448	63203333	ENSG00000240359.1	-	processed_pseudogene	KNOWN	UBL5P3	1	1	-0.532499
chr3	63228315	63616921	63422618	ENSG00000163630.10	+	protein_coding	KNOWN	SYNPR	15	6	-0.296937
chr3	63334787	63334867	63334827	ENSG00000252662.1	+	miRNA	NOVEL	AC099545.1	1	1	-0.096865
chr3	63423596	63550051	63486823	ENSG00000241359.1	-	antisense	KNOWN	SYNPR-AS1	1	5	-0.372378
chr3	63545440	63545535	63545487	ENSG00000252301.1	+	rRNA	KNOWN	RNA5SP134	1	1	-0.238760
chr3	63652668	63679020	63665844	ENSG00000188817.7	+	protein_coding	KNOWN	SNTN	3	5	-0.026419
chr3	63742293	63827445	63784869	ENSG00000224479.5	-	transcribed_unprocessed_pseudogene	KNOWN	AC136289.1	4	13	-0.111677
chr3	63791535	63791656	63791595	ENSG00000281666.1	+	miRNA	NOVEL	AC104162.1	1	1	-0.068473
chr3	63819362	63848636	63833999	ENSG00000163632.12	+	protein_coding	KNOWN	C3orf49	3	7	-0.188044
chr3	63833870	63863903	63848886	ENSG00000163634.11	-	protein_coding	KNOWN	THOC7	7	8	-0.193530
chr3	63860645	63861819	63861232	ENSG00000240549.2	+	antisense	KNOWN	THOC7-AS1	1	2	-0.072395
chr3	63864557	64003462	63934009	ENSG00000163635.17	+	protein_coding	KNOWN	ATXN7	13	13	0.197024
chr3	63911518	63911772	63911645	ENSG00000280620.1	-	antisense	KNOWN	SCAANT1	1	1	0.233238
chr3	64004022	64012148	64008085	ENSG00000239653.1	+	antisense	KNOWN	PSMD6-AS2	1	3	0.234866
chr3	64008082	64008692	64008387	ENSG00000271843.1	-	lincRNA	KNOWN	RP11-245J9.5	1	1	0.226789
chr3	64010549	64024010	64017279	ENSG00000163636.10	-	protein_coding	KNOWN	PSMD6	12	9	0.257330
chr3	64011964	64016246	64014105	ENSG00000243410.1	+	antisense	KNOWN	RP11-245J9.4	1	2	0.257330
chr3	64019508	64019925	64019716	ENSG00000272181.1	+	antisense	KNOWN	RP11-245J9.6	1	1	0.257330
chr3	64067964	64103131	64085547	ENSG00000241111.1	+	antisense	KNOWN	PRICKLE2-AS1	1	3	0.187005
chr3	64071807	64072019	64071913	ENSG00000200222.2	-	snoRNA	NOVEL	U3	1	1	0.218997
chr3	64078361	64087363	64082862	ENSG00000189196.4	-	lincRNA	KNOWN	LINC00994	1	4	0.218997
chr3	64093867	64445476	64269671	ENSG00000163637.11	-	protein_coding	KNOWN	PRICKLE2	4	9	0.171185
chr3	64099273	64101122	64100197	ENSG00000241572.1	+	antisense	KNOWN	PRICKLE2-AS1	2	2	0.165158
chr3	64103470	64106056	64104763	ENSG00000241101.1	+	antisense	KNOWN	PRICKLE2-AS2	1	4	0.165158
chr3	64174401	64175147	64174774	ENSG00000239926.1	+	processed_pseudogene	KNOWN	PRDX3P4	1	1	0.397241
chr3	64187544	64200965	64194254	ENSG00000226017.2	+	antisense	KNOWN	PRICKLE2-AS3	1	4	0.306116
chr3	64444482	64445476	64444979	ENSG00000243993.1	-	lincRNA	KNOWN	RP11-14D22.2	1	2	-0.217791
chr3	64445231	64454832	64450031	ENSG00000244564.1	+	lincRNA	KNOWN	RP11-14D22.1	1	4	-0.053257
chr3	64511755	64511857	64511806	ENSG00000212340.1	+	snRNA	KNOWN	RNU6-739P	1	1	-0.084886
chr3	64515654	64688000	64601827	ENSG00000163638.13	-	protein_coding	KNOWN	ADAMTS9	10	40	-0.234536
chr3	64561322	64592757	64577039	ENSG00000241158.5	+	antisense	KNOWN	ADAMTS9-AS1	20	4	-0.218752
chr3	64684909	65011468	64848188	ENSG00000241684.5	+	antisense	KNOWN	ADAMTS9-AS2	4	6	-0.394791
chr3	65174958	65193499	65184228	ENSG00000243149.1	+	lincRNA	KNOWN	RP11-543A18.1	1	4	-0.258710
chr3	65232900	65232983	65232941	ENSG00000264871.1	-	miRNA	NOVEL	AC104331.1	1	1	-0.317992
chr3	65353525	66038834	65696179	ENSG00000151276.23	-	protein_coding	KNOWN	MAGI1	18	25	-0.028444
chr3	65359268	65359717	65359492	ENSG00000270059.1	-	sense_intronic	KNOWN	RP11-88H12.2	1	1	-0.323046
chr3	65687301	65688468	65687884	ENSG00000244226.1	+	processed_pseudogene	KNOWN	ILF2P1	1	1	-0.185303
chr3	65843890	65844446	65844168	ENSG00000223409.1	+	processed_pseudogene	KNOWN	RPL17P17	1	1	0.156843
chr3	65872815	65954558	65913686	ENSG00000272610.1	-	sense_intronic	KNOWN	MAGI1-IT1	1	3	0.104697
chr3	65893816	65925297	65909556	ENSG00000240175.1	+	antisense	KNOWN	MAGI1-AS1	1	3	0.074959
chr3	65941247	65941347	65941297	ENSG00000274622.2	+	miRNA	NOVEL	AC106827.1	1	1	0.219999
chr3	66003839	66003940	66003889	ENSG00000202071.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.193687
chr3	66008770	66009200	66008985	ENSG00000203647.2	-	processed_pseudogene	KNOWN	RP11-320P11.1	1	1	0.193687
chr3	66133610	66388116	66260863	ENSG00000144741.17	+	protein_coding	KNOWN	SLC25A26	6	13	-0.134310
chr3	66293114	66293220	66293167	ENSG00000206759.1	-	snRNA	KNOWN	RNU6-787P	1	1	-0.092433
chr3	66323855	66324152	66324003	ENSG00000241587.3	+	misc_RNA	KNOWN	RN7SL482P	1	1	-0.200985
chr3	66378797	66501263	66440030	ENSG00000144749.13	-	protein_coding	KNOWN	LRIG1	9	20	0.154555
chr3	66571603	66571690	66571646	ENSG00000277939.1	-	miRNA	NOVEL	AC099665.1	1	1	-0.464402
chr3	66622760	66623102	66622931	ENSG00000271174.1	-	processed_pseudogene	KNOWN	RP11-814M22.2	1	1	0.118144
chr3	66637149	66637412	66637280	ENSG00000214560.4	+	processed_pseudogene	KNOWN	RPL21P41	1	1	-0.363090
chr3	66998307	67011210	67004758	ENSG00000163376.11	+	protein_coding	KNOWN	KBTBD8	5	4	-0.304329
chr3	67296300	67306359	67301329	ENSG00000241884.2	+	lincRNA	KNOWN	RP11-85I21.1	2	2	-0.525637
chr3	67360460	67654614	67507537	ENSG00000172340.14	-	protein_coding	KNOWN	SUCLG2	4	11	-0.140247
chr3	67513940	67514320	67514130	ENSG00000242510.1	+	processed_pseudogene	KNOWN	NDUFB4P1	1	1	-0.157368
chr3	67654697	67947713	67801205	ENSG00000241316.6	+	lincRNA	KNOWN	SUCLG2-AS1	3	7	-0.350811
chr3	67828172	67828273	67828222	ENSG00000266400.1	+	miRNA	NOVEL	AC113171.1	1	1	-0.685616
chr3	68004216	68545625	68274920	ENSG00000183662.10	+	protein_coding	KNOWN	FAM19A1	4	5	-0.453325
chr3	68145004	68145630	68145317	ENSG00000214552.4	+	processed_pseudogene	KNOWN	COPS8P2	1	1	-0.172905
chr3	68192398	68192580	68192489	ENSG00000240568.1	+	processed_pseudogene	KNOWN	RP11-1008M1.1	1	1	-0.616959
chr3	68633706	68634356	68634031	ENSG00000244640.1	-	processed_pseudogene	KNOWN	RP11-436J20.1	1	1	-0.320203
chr3	68634916	68635009	68634962	ENSG00000212095.1	+	miRNA	NOVEL	AC096922.1	1	1	-0.320203
chr3	68635705	68637024	68636364	ENSG00000241506.1	+	processed_pseudogene	KNOWN	PSMC1P1	1	1	-0.320203
chr3	68688480	68688588	68688534	ENSG00000275845.1	+	miRNA	NOVEL	AC096922.2	1	1	-0.200985
chr3	68731766	68953297	68842531	ENSG00000163377.15	-	protein_coding	KNOWN	FAM19A4	3	7	-0.320465
chr3	68882967	68883091	68883029	ENSG00000252828.1	+	rRNA	KNOWN	RNA5SP135	1	1	-0.299199
chr3	68975214	69013961	68994587	ENSG00000163378.13	-	protein_coding	KNOWN	EOGT	10	18	-0.098229
chr3	69013941	69056622	69035281	ENSG00000244513.6	+	antisense	KNOWN	CTD-2013N24.2	13	4	-0.249845
chr3	69019827	69052303	69036065	ENSG00000144747.14	-	protein_coding	KNOWN	TMF1	5	19	-0.338774
chr3	69048958	69049035	69048996	ENSG00000265355.1	-	miRNA	KNOWN	MIR3136	1	1	-0.573024
chr3	69054730	69080408	69067569	ENSG00000144744.16	-	protein_coding	KNOWN	UBA3	13	18	0.003087
chr3	69084944	69106066	69095505	ENSG00000144746.6	+	protein_coding	KNOWN	ARL6IP5	5	4	0.362654
chr3	69106872	69123032	69114952	ENSG00000163380.15	-	protein_coding	KNOWN	LMOD3	3	4	0.175746
chr3	69169990	69542583	69356286	ENSG00000114541.14	-	protein_coding	KNOWN	FRMD4B	18	23	-0.187096
chr3	69471452	69472532	69471992	ENSG00000239263.1	-	processed_pseudogene	KNOWN	RBM43P1	1	1	-0.216846
chr3	69535664	69536693	69536178	ENSG00000240265.1	-	processed_pseudogene	KNOWN	RP11-62G11.1	1	1	-0.044745
chr3	69564106	69571122	69567614	ENSG00000240842.1	-	lincRNA	KNOWN	RP11-62G11.2	1	3	-0.123472
chr3	69591341	69593121	69592231	ENSG00000241667.1	+	lincRNA	KNOWN	RP11-444P10.1	1	2	-0.473288
chr3	69739435	69968337	69853886	ENSG00000187098.14	+	protein_coding	KNOWN	MITF	17	10	-0.048357
chr3	69769487	69769773	69769630	ENSG00000241665.3	-	misc_RNA	KNOWN	RN7SL418P	1	1	0.032403
chr3	69920125	69920210	69920167	ENSG00000265722.1	+	miRNA	NOVEL	AC099326.1	1	1	-0.226184
chr3	69999577	70015318	70007447	ENSG00000240405.5	+	lincRNA	KNOWN	LINC01212	2	4	-0.196423
chr3	70125070	70126609	70125839	ENSG00000271034.1	-	processed_pseudogene	KNOWN	RP11-963H1.1	1	1	-0.510044
chr3	70140217	70140488	70140352	ENSG00000242728.1	+	processed_pseudogene	KNOWN	UQCRHP4	1	1	-0.186309
chr3	70196894	70312726	70254810	ENSG00000242120.3	-	antisense	KNOWN	RP11-231I13.2	1	4	-0.510105
chr3	70251643	70251745	70251694	ENSG00000222615.1	-	miRNA	NOVEL	AC134025.1	1	1	-0.464956
chr3	70751123	70751350	70751236	ENSG00000240156.1	+	processed_pseudogene	KNOWN	COX6CP6	1	1	-0.033539
chr3	70753854	70754573	70754213	ENSG00000243873.1	+	processed_pseudogene	KNOWN	HMGB1P36	1	2	-0.033539
chr3	70808350	70808452	70808401	ENSG00000206939.1	+	snRNA	KNOWN	RNU6-281P	1	1	-0.087987
chr3	70878660	70878792	70878726	ENSG00000221382.1	-	miRNA	NOVEL	AC096971.1	1	1	0.039524
chr3	70954693	71583989	71269341	ENSG00000114861.18	-	protein_coding	KNOWN	FOXP1	23	22	0.144100
chr3	71276087	71289616	71282851	ENSG00000277539.1	-	sense_intronic	KNOWN	RP11-298C2.1	1	3	0.250690
chr3	71289769	71305853	71297811	ENSG00000244203.2	+	antisense	KNOWN	FOXP1-AS1	1	5	0.167622
chr3	71541970	71542089	71542029	ENSG00000221264.1	-	miRNA	KNOWN	MIR1284	1	1	0.312258
chr3	71567863	71571112	71569487	ENSG00000274387.1	+	antisense	KNOWN	RP11-154H23.5	1	2	0.133844
chr3	71570255	71574457	71572356	ENSG00000242094.1	-	sense_intronic	KNOWN	FOXP1-IT1	1	2	0.264053
chr3	71581721	71628558	71605139	ENSG00000277855.1	+	antisense	KNOWN	RP11-154H23.4	1	3	0.108809
chr3	71584943	71587409	71586176	ENSG00000270562.1	+	lincRNA	KNOWN	RP11-154H23.3	1	1	0.264053
chr3	71675416	71754773	71715094	ENSG00000163412.12	-	protein_coding	KNOWN	EIF4E3	10	8	-0.175736
chr3	71754050	71756496	71755273	ENSG00000170837.2	+	protein_coding	KNOWN	GPR27	1	1	-0.190647
chr3	71771656	71785206	71778431	ENSG00000163421.8	-	protein_coding	KNOWN	PROK2	2	4	-0.195811
chr3	71827177	71827471	71827324	ENSG00000239250.3	+	misc_RNA	KNOWN	RN7SL271P	1	1	-0.320655
chr3	72006774	72006975	72006874	ENSG00000244130.1	+	processed_pseudogene	KNOWN	UBE2Q2P9	1	1	0.215506
chr3	72023537	72023604	72023570	ENSG00000274043.1	-	miRNA	NOVEL	AC105265.1	1	1	-0.084597
chr3	72035300	72279503	72157401	ENSG00000241163.7	-	lincRNA	KNOWN	LINC00877	10	7	0.155147
chr3	72061061	72069933	72065497	ENSG00000273461.5	+	lincRNA	KNOWN	RP11-398A8.4	2	5	0.077708
chr3	72080564	72084641	72082602	ENSG00000276471.1	-	lincRNA	KNOWN	RP11-398A8.5	1	2	0.091992
chr3	72085109	72085287	72085198	ENSG00000239350.2	+	processed_pseudogene	KNOWN	RP11-398A8.2	1	1	0.091992
chr3	72086888	72087725	72087306	ENSG00000242609.1	+	processed_pseudogene	KNOWN	RP11-398A8.1	1	1	0.091992
chr3	72151257	72174332	72162794	ENSG00000243083.5	+	lincRNA	KNOWN	LINC00870	3	3	0.503042
chr3	72178279	72178810	72178544	ENSG00000272774.1	+	lincRNA	KNOWN	RP11-433A10.3	1	1	0.165241
chr3	72202944	72209892	72206418	ENSG00000242618.1	-	lincRNA	KNOWN	RP11-433A10.2	1	3	-0.017080
chr3	72262322	72262428	72262375	ENSG00000212070.1	-	miRNA	NOVEL	AC112219.1	1	1	0.333000
chr3	72321051	72324027	72322539	ENSG00000260670.1	-	lincRNA	KNOWN	RP11-447M4.1	1	1	0.627151
chr3	72371825	72446918	72409371	ENSG00000163602.9	-	protein_coding	KNOWN	RYBP	1	4	0.063130
chr3	72504806	72550552	72527679	ENSG00000244345.1	-	lincRNA	KNOWN	RP11-654C22.2	1	3	0.254723
chr3	72576691	72576854	72576772	ENSG00000199469.1	+	snRNA	KNOWN	RNU1-62P	1	1	0.482944
chr3	72583370	72583535	72583452	ENSG00000239568.1	+	processed_pseudogene	KNOWN	RP11-654C22.1	1	1	0.482944
chr3	72691705	72691811	72691758	ENSG00000222838.1	-	rRNA	KNOWN	RNA5SP136	1	1	0.469227
chr3	72749277	72861914	72805595	ENSG00000144736.13	-	protein_coding	KNOWN	SHQ1	8	11	-0.090527
chr3	72772539	72773471	72773005	ENSG00000241537.1	+	processed_pseudogene	KNOWN	RP11-624D20.1	1	1	-0.117462
chr3	72876737	72878102	72877419	ENSG00000240135.1	-	unprocessed_pseudogene	KNOWN	PSMD12P	1	1	0.367270
chr3	72884234	72884679	72884456	ENSG00000271266.1	+	processed_pseudogene	KNOWN	LAPTM4BP2	1	1	0.367270
chr3	72888073	72998138	72943105	ENSG00000172986.12	+	protein_coding	KNOWN	GXYLT2	3	7	0.222338
chr3	72926955	72927237	72927096	ENSG00000276890.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.345748
chr3	72929044	72929593	72929318	ENSG00000242960.1	+	processed_pseudogene	KNOWN	FTH1P23	1	1	0.345748
chr3	72996785	73069199	73032992	ENSG00000163605.14	+	protein_coding	KNOWN	PPP4R2	7	9	0.182225
chr3	73027808	73027873	73027840	ENSG00000238959.1	+	snRNA	KNOWN	RNU7-19P	1	1	0.163545
chr3	73061659	73063337	73062498	ENSG00000255423.1	+	protein_coding	KNOWN	EBLN2	1	1	-0.027155
chr3	73092148	73092257	73092202	ENSG00000252651.1	-	snRNA	KNOWN	RNU6-557P	1	1	0.473241
chr3	73110992	73111182	73111087	ENSG00000223247.1	+	snRNA	KNOWN	RNU2-64P	1	1	0.290158
chr3	73182501	73183291	73182896	ENSG00000182921.9	-	processed_pseudogene	KNOWN	CCDC75P1	1	1	-0.169548
chr3	73241789	73241896	73241842	ENSG00000252937.1	-	snRNA	KNOWN	RNU6-1270P	1	1	-0.330865
chr3	73382433	73624940	73503686	ENSG00000121440.14	-	protein_coding	KNOWN	PDZRN3	12	10	0.071761
chr3	73593940	73594002	73593971	ENSG00000239119.1	-	snRNA	KNOWN	RNU7-119P	1	1	0.180528
chr3	73621713	73626796	73624254	ENSG00000239677.6	+	antisense	KNOWN	PDZRN3-AS1	4	4	0.307005
chr3	73624410	73627626	73626018	ENSG00000278934.1	+	TEC	KNOWN	CTD-2006M22.2	1	1	0.307005
chr3	73648399	73648807	73648603	ENSG00000242364.1	-	processed_pseudogene	KNOWN	RP11-451J24.1	1	1	-0.034838
chr3	73808601	73902866	73855733	ENSG00000242741.1	+	lincRNA	KNOWN	RP11-20B7.1	1	4	-0.290631
chr3	73959642	73959927	73959784	ENSG00000278554.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.414544
chr3	73999805	74005609	74002707	ENSG00000239454.1	+	lincRNA	KNOWN	RP11-508O18.1	1	2	-0.377493
chr3	74101349	74103553	74102451	ENSG00000223738.3	+	processed_pseudogene	KNOWN	RP11-781E19.1	1	1	-0.345588
chr3	74135959	74136892	74136425	ENSG00000213452.4	+	processed_pseudogene	KNOWN	AKR1B1P2	1	1	-0.629107
chr3	74262568	74521140	74391854	ENSG00000113805.8	-	protein_coding	KNOWN	CNTN3	2	22	-0.246344
chr3	74534783	74534871	74534827	ENSG00000263689.1	-	miRNA	NOVEL	AC128653.1	1	1	0.033496
chr3	75084155	75085237	75084696	ENSG00000241022.1	+	processed_pseudogene	KNOWN	NIPA2P2	1	1	-0.899880
chr3	75182754	75183048	75182901	ENSG00000242638.3	-	misc_RNA	KNOWN	RN7SL294P	1	1	-0.395123
chr3	75214476	75214549	75214512	ENSG00000266780.1	+	miRNA	KNOWN	MIR4444-2	1	1	-0.544501
chr3	75214631	75215636	75215133	ENSG00000213300.5	+	processed_pseudogene	KNOWN	HNRNPA3P6	1	1	-0.544501
chr3	75328549	75339071	75333810	ENSG00000228868.3	-	unprocessed_pseudogene	KNOWN	MYLKP1	1	5	0.032064
chr3	75346139	75346215	75346177	ENSG00000263782.1	-	miRNA	NOVEL	AC117481.1	1	1	0.054902
chr3	75347833	75348787	75348310	ENSG00000243674.1	-	unprocessed_pseudogene	KNOWN	OR7E66P	1	1	0.054902
chr3	75356516	75357503	75357009	ENSG00000179799.8	-	unprocessed_pseudogene	KNOWN	OR7E22P	1	1	-0.111100
chr3	75369259	75369346	75369302	ENSG00000266685.1	-	miRNA	NOVEL	AC139453.1	1	1	-0.111100
chr3	75370448	75371342	75370895	ENSG00000230655.3	-	unprocessed_pseudogene	KNOWN	OR7E55P	1	1	-0.007018
chr3	75384059	75391810	75387934	ENSG00000244699.1	-	unprocessed_pseudogene	KNOWN	RP11-803B1.2	1	3	0.060904
chr3	75395188	75395320	75395254	ENSG00000240665.1	+	processed_pseudogene	KNOWN	LSP1P2	1	1	0.283687
chr3	75395404	75395536	75395470	ENSG00000242953.1	-	processed_pseudogene	KNOWN	RP11-803B1.3	1	1	0.283687
chr3	75415070	75422143	75418606	ENSG00000238278.3	+	unprocessed_pseudogene	KNOWN	ALG1L6P	1	8	0.410168
chr3	75421552	75435110	75428331	ENSG00000244026.6	-	transcribed_unprocessed_pseudogene	KNOWN	FAM86DP	7	8	0.356794
chr3	75435348	75457486	75446417	ENSG00000272690.5	+	lincRNA	KNOWN	RP11-803B1.8	3	4	0.166405
chr3	75446769	75491202	75468985	ENSG00000239959.1	-	unprocessed_pseudogene	KNOWN	ENPP7P2	1	3	0.002113
chr3	75521803	75522012	75521907	ENSG00000243794.1	+	processed_pseudogene	KNOWN	SNRPCP10	1	1	0.024088
chr3	75540049	75579999	75560024	ENSG00000272710.1	-	lincRNA	KNOWN	CTD-2026G6.3	1	2	0.172039
chr3	75542149	75542929	75542539	ENSG00000244674.1	-	processed_pseudogene	KNOWN	RPS3AP15	1	1	-0.173469
chr3	75549797	75549945	75549871	ENSG00000221602.1	+	miRNA	NOVEL	AC133041.1	1	1	-0.173469
chr3	75590298	75590649	75590473	ENSG00000239383.1	-	processed_pseudogene	KNOWN	RP11-413E6.2	1	1	-0.103795
chr3	75598652	75599673	75599162	ENSG00000244222.2	-	unprocessed_pseudogene	KNOWN	OR7E121P	1	1	-0.103795
chr3	75619506	75623849	75621677	ENSG00000172971.7	-	unprocessed_pseudogene	KNOWN	UNC93B3	1	3	0.142873
chr3	75624686	75625153	75624919	ENSG00000243422.1	-	processed_pseudogene	KNOWN	RPL23AP49	1	1	0.142873
chr3	75624899	75625188	75625043	ENSG00000282912.1	+	processed_pseudogene	KNOWN	RP11-413E6.11	1	1	0.142873
chr3	75629993	75634057	75632025	ENSG00000282511.1	+	unprocessed_pseudogene	KNOWN	CLUHP10	1	9	0.038707
chr3	75630763	75630858	75630810	ENSG00000221795.1	+	miRNA	KNOWN	MIR1324	1	1	0.038553
chr3	75653561	75654773	75654167	ENSG00000241532.1	-	processed_pseudogene	KNOWN	AGGF1P3	1	1	-0.074018
chr3	75658534	75659014	75658774	ENSG00000241622.1	+	processed_pseudogene	KNOWN	RARRES2P1	1	1	-0.074018
chr3	75664330	75667220	75665775	ENSG00000172969.7	+	protein_coding	KNOWN	FRG2C	2	4	-0.074018
chr3	75668931	75670185	75669558	ENSG00000236138.4	+	processed_pseudogene	KNOWN	DUX4L26	1	1	-0.046452
chr3	75672391	75679303	75675847	ENSG00000242516.1	+	lincRNA	KNOWN	LINC00960	2	6	0.111831
chr3	75709643	75785583	75747613	ENSG00000227124.8	-	protein_coding	KNOWN	ZNF717	5	6	-0.200477
chr3	75713012	75713314	75713163	ENSG00000265592.2	-	misc_RNA	KNOWN	RN7SL92P	1	1	-0.402300
chr3	75738280	75738363	75738321	ENSG00000266396.1	+	miRNA	KNOWN	MIR4273	1	1	-0.289879
chr3	75906695	77649964	76778329	ENSG00000185008.17	+	protein_coding	KNOWN	ROBO2	13	27	-0.534738
chr3	75964980	75965069	75965024	ENSG00000222883.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.740064
chr3	76234402	76234489	76234445	ENSG00000252504.3	-	miRNA	NOVEL	AC067717.1	1	1	-0.511781
chr3	76417896	76417980	76417938	ENSG00000212104.1	-	miRNA	NOVEL	AC026877.1	1	1	-0.469887
chr3	76434018	76435428	76434723	ENSG00000240809.1	+	processed_pseudogene	KNOWN	RP11-550F7.1	1	1	-0.453977
chr3	77092057	77092163	77092110	ENSG00000199520.1	+	snRNA	KNOWN	RNU6-386P	1	1	-0.529497
chr3	77316752	77317598	77317175	ENSG00000213450.4	-	processed_pseudogene	KNOWN	VDAC1P7	1	1	-0.105689
chr3	77811741	77811844	77811792	ENSG00000206891.1	-	snRNA	KNOWN	RNU6-217P	1	1	-0.624836
chr3	77926705	77926786	77926745	ENSG00000264841.1	-	miRNA	NOVEL	AC134729.1	1	1	-0.634990
chr3	78038705	78046794	78042749	ENSG00000244461.1	-	lincRNA	KNOWN	RP11-354H21.1	1	3	-0.614649
chr3	78087404	78092270	78089837	ENSG00000240573.1	+	lincRNA	KNOWN	RP11-354H21.2	1	3	-0.195544
chr3	78115158	78115457	78115307	ENSG00000243957.3	+	misc_RNA	KNOWN	RN7SL647P	1	1	0.017030
chr3	78161698	78161992	78161845	ENSG00000222574.1	+	misc_RNA	KNOWN	RN7SKP61	1	1	-0.149016
chr3	78266940	78294731	78280835	ENSG00000240241.5	+	lincRNA	KNOWN	RP11-314M24.1	3	4	-0.252474
chr3	78525101	78525485	78525293	ENSG00000239226.1	+	processed_pseudogene	KNOWN	MRPS17P3	1	1	0.064158
chr3	78597240	79767815	79182527	ENSG00000169855.19	-	protein_coding	KNOWN	ROBO1	13	31	-0.435880
chr3	78758974	78759374	78759174	ENSG00000240752.1	+	processed_pseudogene	KNOWN	RP11-588D3.1	1	1	-0.328340
chr3	78938009	78938292	78938150	ENSG00000240964.3	-	misc_RNA	KNOWN	RN7SL751P	1	1	-0.328714
chr3	79507887	79507969	79507928	ENSG00000265193.1	+	miRNA	KNOWN	MIR3923	1	1	-0.610622
chr3	79584592	79584684	79584638	ENSG00000216116.1	-	miRNA	NOVEL	AC117479.1	1	1	-0.542214
chr3	79957566	79958142	79957854	ENSG00000243877.1	-	processed_pseudogene	KNOWN	HMGB1P38	1	1	-0.733174
chr3	80163327	80164795	80164061	ENSG00000271389.1	+	processed_pseudogene	KNOWN	OSBPL9P1	1	1	-0.579385
chr3	80216261	80217234	80216747	ENSG00000239699.1	+	processed_pseudogene	KNOWN	HNRNPA3P8	1	1	-0.538774
chr3	80442081	80442305	80442193	ENSG00000242586.1	+	unprocessed_pseudogene	KNOWN	RP11-481N16.1	1	1	-0.488469
chr3	80761042	80788963	80775002	ENSG00000242828.1	-	lincRNA	KNOWN	RP11-47P18.1	1	3	-0.741724
chr3	80764897	80789354	80777125	ENSG00000242781.1	+	lincRNA	KNOWN	RP11-47P18.2	1	5	-0.754392
chr3	80871198	80871266	80871232	ENSG00000266025.2	+	miRNA	NOVEL	AC128715.1	1	1	-0.348581
chr3	80993868	81095647	81044757	ENSG00000243694.2	+	lincRNA	KNOWN	RP11-6B4.1	1	2	-0.482866
chr3	81208193	81208914	81208553	ENSG00000242145.1	-	lincRNA	KNOWN	RP11-520D19.1	1	2	-0.577035
chr3	81246579	81297345	81271962	ENSG00000241593.5	-	lincRNA	KNOWN	RP11-520D19.2	2	5	-0.490947
chr3	81366990	81368021	81367505	ENSG00000244281.1	-	processed_pseudogene	KNOWN	RP11-564P9.1	1	1	-0.325928
chr3	81489699	81762161	81625930	ENSG00000114480.12	-	protein_coding	KNOWN	GBE1	6	16	-0.269016
chr3	81509476	81509664	81509570	ENSG00000222389.1	+	snRNA	KNOWN	RNU2-28P	1	1	-0.304361
chr3	81612238	81612805	81612521	ENSG00000241319.1	-	processed_pseudogene	KNOWN	SETP6	1	1	0.147701
chr3	81612790	81613075	81612932	ENSG00000240404.2	+	processed_pseudogene	KNOWN	RP11-142L1.3	1	1	0.147701
chr3	81762706	81764756	81763731	ENSG00000242190.1	-	lincRNA	KNOWN	RP11-142L1.1	1	3	-0.140893
chr3	81840547	81922861	81881704	ENSG00000242009.1	+	lincRNA	KNOWN	RP11-359D24.1	1	5	-0.422347
chr3	81986138	82463675	82224906	ENSG00000239440.5	+	lincRNA	KNOWN	RP11-260O18.1	2	9	-0.547290
chr3	82319172	82320279	82319725	ENSG00000241367.1	-	processed_pseudogene	KNOWN	RPL7AP23	1	2	-0.501688
chr3	82806515	82808021	82807268	ENSG00000241095.1	-	processed_pseudogene	KNOWN	CYP51A1P1	1	1	-0.641933
chr3	83937045	83938236	83937640	ENSG00000242195.1	+	processed_pseudogene	KNOWN	SRRM1P2	1	1	-0.484200
chr3	84290112	84290253	84290182	ENSG00000221380.1	-	miRNA	NOVEL	AC108696.1	1	1	-0.654889
chr3	84496576	84496663	84496619	ENSG00000266652.1	+	miRNA	NOVEL	AC107025.1	1	1	-0.223784
chr3	84638406	84881679	84760042	ENSG00000242641.5	-	lincRNA	KNOWN	LINC00971	3	21	-0.461529
chr3	84691681	84692591	84692136	ENSG00000241776.1	-	processed_pseudogene	KNOWN	RP11-651J20.1	1	1	-0.484200
chr3	84884936	84893379	84889157	ENSG00000242339.1	+	lincRNA	KNOWN	RP11-735B13.2	1	3	-0.562014
chr3	84958981	86074429	85516705	ENSG00000175161.13	+	protein_coding	KNOWN	CADM2	5	10	-0.576337
chr3	85385710	85385792	85385751	ENSG00000264084.1	+	miRNA	KNOWN	MIR5688	1	1	-0.366373
chr3	85615686	85615742	85615714	ENSG00000274634.1	+	miRNA	NOVEL	AC018361.1	1	1	-0.801093
chr3	85799987	85828050	85814018	ENSG00000241648.1	-	antisense	KNOWN	CADM2-AS2	1	4	-0.585005
chr3	85992183	86028007	86010095	ENSG00000239519.1	-	antisense	KNOWN	CADM2-AS1	1	2	-0.551512
chr3	86012561	86015120	86013840	ENSG00000243915.1	+	processed_pseudogene	KNOWN	PRKRIRP2	1	2	-0.589326
chr3	86125216	86125287	86125251	ENSG00000201410.1	+	snoRNA	NOVEL	snoZ40	1	1	-0.289098
chr3	86235321	86235424	86235372	ENSG00000251773.1	+	snRNA	KNOWN	RNU6-1129P	1	1	-1.099150
chr3	86264555	86267361	86265958	ENSG00000239767.1	-	lincRNA	KNOWN	RP11-789F5.1	1	2	-0.833046
chr3	86362132	86362474	86362303	ENSG00000222934.1	+	misc_RNA	KNOWN	RN7SKP284	1	1	-0.547418
chr3	86481943	86496996	86489469	ENSG00000241328.1	+	lincRNA	KNOWN	RP11-331K15.1	1	2	-0.849121
chr3	86816740	86817036	86816888	ENSG00000277746.1	+	processed_pseudogene	KNOWN	RP11-43A1.1	1	1	-0.320062
chr3	86937969	86991119	86964544	ENSG00000206538.7	-	protein_coding	KNOWN	VGLL3	3	4	0.085321
chr3	87051192	87052738	87051965	ENSG00000241293.1	-	processed_pseudogene	KNOWN	PPATP1	1	1	-0.390285
chr3	87089129	87157069	87123099	ENSG00000281392.1	+	lincRNA	KNOWN	LINC00506	4	3	-0.295407
chr3	87226189	87226277	87226233	ENSG00000264119.1	-	miRNA	KNOWN	MIR4795	1	1	-0.206090
chr3	87227271	87255548	87241409	ENSG00000083937.8	+	protein_coding	KNOWN	CHMP2B	5	6	-0.054397
chr3	87259404	87276587	87267995	ENSG00000064835.10	-	protein_coding	KNOWN	POU1F1	4	6	-0.326435
chr3	87323268	87324723	87323995	ENSG00000239829.1	+	processed_pseudogene	KNOWN	KRT8P25	1	1	-0.388813
chr3	87323969	87324095	87324032	ENSG00000280503.1	-	miRNA	NOVEL	AC130885.1	1	1	-0.388813
chr3	87594838	87595376	87595107	ENSG00000240902.1	+	processed_pseudogene	KNOWN	APOOP2	1	1	-0.178366
chr3	87630301	87631619	87630960	ENSG00000240255.1	-	processed_pseudogene	KNOWN	PSMC1P6	1	1	-0.357619
chr3	87731402	87793629	87762515	ENSG00000239572.1	-	lincRNA	KNOWN	RP11-451B8.1	1	2	-0.505041
chr3	87742543	87742649	87742596	ENSG00000200703.1	-	snRNA	KNOWN	RNU6-873P	1	1	-0.357619
chr3	87910220	87910345	87910282	ENSG00000221059.1	+	snRNA	KNOWN	RNU6ATAC6P	1	1	-0.458561
chr3	87990696	87993835	87992265	ENSG00000179097.5	+	protein_coding	KNOWN	HTR1F	1	1	-0.192889
chr3	88051944	88149885	88100914	ENSG00000163320.10	-	protein_coding	KNOWN	CGGBP1	6	4	-0.171193
chr3	88059274	88138973	88099123	ENSG00000229729.6	+	lincRNA	KNOWN	RP11-159G9.5	3	7	-0.188428
chr3	88095408	88095968	88095688	ENSG00000241535.1	-	processed_pseudogene	KNOWN	CBX5P1	1	1	-0.108827
chr3	88139104	88144665	88141884	ENSG00000175105.5	+	protein_coding	KNOWN	ZNF654	1	2	-0.091971
chr3	88149743	88168729	88159236	ENSG00000179021.9	+	protein_coding	KNOWN	C3orf38	4	3	0.209857
chr3	88317156	88319022	88318089	ENSG00000242159.1	+	processed_pseudogene	KNOWN	ABCF2P1	1	1	-0.505249
chr3	88431191	88431309	88431250	ENSG00000207316.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.568802
chr3	88601061	88601402	88601231	ENSG00000242365.1	+	processed_pseudogene	KNOWN	NDUFA5P5	1	1	-0.329472
chr3	88948142	88950928	88949535	ENSG00000242705.1	+	processed_pseudogene	KNOWN	ICE2P2	1	1	-0.532676
chr3	89047442	89048434	89047938	ENSG00000241861.2	-	processed_pseudogene	KNOWN	GAPDHP50	1	1	-0.385781
chr3	89107524	89482134	89294829	ENSG00000044524.10	+	protein_coding	KNOWN	EPHA3	3	17	-0.544802
chr3	89587886	89588570	89588228	ENSG00000240951.1	-	processed_pseudogene	KNOWN	MTCO2P6	1	1	-0.338248
chr3	89588714	89590097	89589405	ENSG00000240309.1	-	processed_pseudogene	KNOWN	MTCO1P6	1	1	-0.370148
chr3	89617411	89617546	89617478	ENSG00000280553.1	-	miRNA	NOVEL	AC026305.1	1	1	-0.497075
chr3	90030284	90030495	90030389	ENSG00000212598.2	+	snoRNA	NOVEL	U3	1	1	-0.403536
chr3	90184634	90184733	90184683	ENSG00000222490.1	+	snRNA	KNOWN	RNU6-712P	1	1	-0.331409
chr3	90202316	90257415	90229865	ENSG00000189002.10	-	unprocessed_pseudogene	KNOWN	PROS2P	1	14	-0.508233
chr3	90261414	90261708	90261561	ENSG00000271024.1	-	processed_pseudogene	KNOWN	HSPE1P19	1	1	-0.628854
chr3	93843764	93843862	93843813	ENSG00000251727.1	+	snRNA	KNOWN	RNU6-488P	1	1	-0.337873
chr3	93873033	93974066	93923549	ENSG00000184500.14	-	protein_coding	KNOWN	PROS1	5	15	-0.446092
chr3	93967926	93968020	93967973	ENSG00000201339.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.613895
chr3	93977029	93977135	93977082	ENSG00000200366.1	+	snRNA	KNOWN	RNU6-511P	1	1	-0.044643
chr3	93980139	94055668	94017903	ENSG00000169379.15	+	protein_coding	KNOWN	ARL13B	10	11	-0.231011
chr3	93988634	93988946	93988790	ENSG00000239614.1	-	processed_pseudogene	KNOWN	HMGN1P7	1	1	-0.044643
chr3	94014369	94028610	94021489	ENSG00000178750.2	-	protein_coding	KNOWN	STX19	1	2	-0.326073
chr3	94047836	94063389	94055612	ENSG00000178700.7	-	protein_coding	KNOWN	DHFRL1	6	3	-0.217989
chr3	94062916	94128545	94095730	ENSG00000178694.9	+	protein_coding	KNOWN	NSUN3	8	6	-0.091668
chr3	94075912	94077175	94076543	ENSG00000242457.1	-	processed_pseudogene	KNOWN	RBBP4P2	1	1	0.091992
chr3	94506766	94507620	94507193	ENSG00000178660.6	-	processed_pseudogene	KNOWN	ARMC10P1	1	1	-0.511349
chr3	94935760	94936120	94935940	ENSG00000242911.1	-	processed_pseudogene	KNOWN	RP11-118N24.2	1	1	-0.401417
chr3	94937086	94938024	94937555	ENSG00000234629.1	-	processed_pseudogene	KNOWN	WDR82P1	1	1	-0.401417
chr3	94938172	95152509	95045340	ENSG00000239589.5	+	lincRNA	KNOWN	LINC00879	5	8	-0.590160
chr3	95171920	95172377	95172148	ENSG00000244048.1	+	processed_pseudogene	KNOWN	RPS18P6	1	1	-0.722793
chr3	95654423	95683193	95668808	ENSG00000244681.1	-	transcribed_processed_pseudogene	KNOWN	MTHFD2P1	3	5	-0.541442
chr3	96166813	96166904	96166858	ENSG00000221477.2	-	miRNA	NOVEL	AC108739.1	1	1	-0.522718
chr3	96244732	96245335	96245033	ENSG00000271671.1	-	processed_pseudogene	KNOWN	RP11-598F17.2	1	2	-0.720148
chr3	96349554	96350939	96350246	ENSG00000243547.1	+	processed_pseudogene	KNOWN	HNRNPKP4	1	1	-0.908226
chr3	96359964	96360039	96360001	ENSG00000278103.1	+	miRNA	KNOWN	MIR8060	1	1	-0.944720
chr3	96566357	96567103	96566730	ENSG00000241815.1	+	processed_pseudogene	KNOWN	RP11-124D9.1	1	1	-0.669848
chr3	96608814	96608917	96608865	ENSG00000199286.1	-	snRNA	KNOWN	RNU6-1094P	1	1	-0.503387
chr3	96617188	96618236	96617712	ENSG00000269028.3	-	protein_coding	KNOWN	MTRNR2L12	1	1	-0.096591
chr3	96619304	96619831	96619567	ENSG00000218754.4	+	processed_pseudogene	KNOWN	RPL18AP8	1	1	-0.096591
chr3	96666194	96666279	96666236	ENSG00000212031.1	-	miRNA	NOVEL	AC117444.1	1	1	-0.618502
chr3	96753185	96754671	96753928	ENSG00000241018.1	+	processed_pseudogene	KNOWN	RCC2P5	1	1	-0.487790
chr3	96776945	96777683	96777314	ENSG00000176243.9	+	processed_pseudogene	KNOWN	CDV3P1	1	1	-0.551864
chr3	96814581	97752460	97283520	ENSG00000080224.17	+	protein_coding	KNOWN	EPHA6	9	18	-0.578038
chr3	97481177	97481506	97481341	ENSG00000251172.1	-	processed_pseudogene	KNOWN	RP11-529P9.1	1	1	-0.758261
chr3	97759523	97761532	97760527	ENSG00000261292.2	+	lincRNA	KNOWN	RP11-389G6.3	1	1	-0.540799
chr3	97764521	97801242	97782881	ENSG00000113966.9	+	protein_coding	KNOWN	ARL6	9	10	-0.581927
chr3	97800733	97821884	97811308	ENSG00000282527.1	-	antisense	KNOWN	RP11-389G6.5	1	3	-0.635252
chr3	97822040	97944963	97883501	ENSG00000080200.9	+	protein_coding	KNOWN	CRYBG3	3	22	-0.316810
chr3	97836986	97874691	97855838	ENSG00000279658.1	-	antisense	KNOWN	RP11-389G6.4	1	6	-0.227947
chr3	97941818	97972457	97957137	ENSG00000170854.17	-	protein_coding	KNOWN	MINA	9	10	-0.059804
chr3	97986673	98035304	98010988	ENSG00000183185.9	-	protein_coding	KNOWN	GABRR3	3	10	-0.434513
chr3	98053374	98053739	98053556	ENSG00000250750.1	+	unprocessed_pseudogene	KNOWN	OR5BM1P	1	1	-0.412683
chr3	98064472	98065396	98064934	ENSG00000213439.3	+	polymorphic_pseudogene	KNOWN	OR5AC1	1	1	-0.412683
chr3	98087173	98088102	98087637	ENSG00000196578.4	+	protein_coding	KNOWN	OR5AC2	1	1	-0.924496
chr3	98099908	98148134	98124021	ENSG00000249225.1	-	antisense	KNOWN	RP11-343D2.11	1	2	-0.593558
chr3	98104754	98105672	98105213	ENSG00000251090.1	+	unprocessed_pseudogene	KNOWN	OR5AC4P	1	1	-0.137795
chr3	98119191	98119731	98119461	ENSG00000248365.3	+	processed_pseudogene	KNOWN	POU5F1P7	1	1	-1.013125
chr3	98132698	98133639	98133168	ENSG00000231192.1	+	protein_coding	KNOWN	OR5H1	1	1	-0.384446
chr3	98149326	98150405	98149865	ENSG00000236032.2	+	protein_coding	KNOWN	OR5H14	1	1	-0.465511
chr3	98168700	98198138	98183419	ENSG00000233412.3	+	protein_coding	KNOWN	OR5H15	2	2	-0.486170
chr3	98197211	98198138	98197674	ENSG00000249321.1	+	unprocessed_pseudogene	KNOWN	OR5H5P	1	1	-0.369339
chr3	98207423	98208341	98207882	ENSG00000249975.1	+	unprocessed_pseudogene	KNOWN	OR5H3P	1	1	-0.369339
chr3	98222044	98222966	98222505	ENSG00000248507.1	+	unprocessed_pseudogene	KNOWN	OR5H4P	1	1	-0.468309
chr3	98233651	98457898	98345774	ENSG00000251088.1	+	lincRNA	KNOWN	RP11-325B23.2	1	4	-0.475894
chr3	98238352	98239281	98238816	ENSG00000187900.4	+	unprocessed_pseudogene	KNOWN	OR5H7P	1	1	-0.981589
chr3	98264285	98265262	98264773	ENSG00000230301.4	+	protein_coding	KNOWN	OR5H6	1	1	-0.430429
chr3	98264285	98265262	98264773	ENSG00000279922.1	+	polymorphic_pseudogene	KNOWN	OR5H6	2	1	-0.430429
chr3	98282888	98283832	98283360	ENSG00000197938.4	+	protein_coding	KNOWN	OR5H2	1	1	-0.694178
chr3	98311913	98312843	98312378	ENSG00000232535.1	+	polymorphic_pseudogene	KNOWN	OR5H8	1	1	-0.576557
chr3	98353854	98354819	98354336	ENSG00000196098.2	+	protein_coding	KNOWN	OR5K4	1	1	-0.555127
chr3	98390666	98391631	98391148	ENSG00000206536.1	+	protein_coding	KNOWN	OR5K3	1	1	-0.261118
chr3	98434034	98434847	98434440	ENSG00000244653.1	+	processed_pseudogene	KNOWN	UBFD1P1	1	1	-0.654975
chr3	98469480	98470576	98470028	ENSG00000232382.1	+	protein_coding	KNOWN	OR5K1	1	1	-0.489306
chr3	98497604	98498663	98498133	ENSG00000231861.2	+	protein_coding	KNOWN	OR5K2	1	1	-0.381939
chr3	98497912	98523066	98510489	ENSG00000080822.16	-	protein_coding	KNOWN	CLDND1	31	6	-0.283348
chr3	98521132	98593723	98557427	ENSG00000080819.6	-	protein_coding	KNOWN	CPOX	5	7	-0.293275
chr3	98522570	98525334	98523952	ENSG00000248839.1	+	antisense	KNOWN	RP11-227H4.5	1	2	-0.192152
chr3	98525061	98525274	98525167	ENSG00000250562.1	-	processed_pseudogene	KNOWN	RPL38P4	1	1	-0.192152
chr3	98531899	98533150	98532524	ENSG00000154165.4	+	protein_coding	KNOWN	GPR15	1	1	-0.331608
chr3	98620065	98620618	98620341	ENSG00000240827.1	+	processed_pseudogene	KNOWN	RP11-227H4.1	1	1	-0.711469
chr3	98623949	98624044	98623996	ENSG00000266233.1	-	miRNA	NOVEL	AC021660.1	1	1	-0.711469
chr3	98657802	98660570	98659186	ENSG00000244153.1	+	processed_pseudogene	KNOWN	WWP1P1	1	1	-0.354755
chr3	98714330	98732651	98723490	ENSG00000239445.5	-	antisense	KNOWN	ST3GAL6-AS1	3	5	0.026019
chr3	98732236	98821201	98776718	ENSG00000064225.12	+	protein_coding	KNOWN	ST3GAL6	28	11	-0.194754
chr3	98782188	98783193	98782690	ENSG00000249274.1	+	processed_pseudogene	KNOWN	PDLIM1P4	1	1	-0.068944
chr3	98795941	98901689	98848815	ENSG00000057019.15	-	protein_coding	KNOWN	DCBLD2	10	16	-0.092871
chr3	98804978	98805084	98805031	ENSG00000206712.1	-	snRNA	KNOWN	RNU6-26P	1	1	0.036497
chr3	98902424	99018562	98960493	ENSG00000239462.1	+	antisense	KNOWN	CTD-2021J15.1	1	4	-0.013275
chr3	98908459	98908564	98908511	ENSG00000207331.1	+	snRNA	KNOWN	RNU6-1263P	1	1	-0.047560
chr3	98981058	98983096	98982077	ENSG00000240476.1	+	lincRNA	KNOWN	LINC00973	1	2	0.366749
chr3	98987387	98987449	98987418	ENSG00000275108.1	+	snRNA	NOVEL	U7	1	1	0.366749
chr3	99215224	99216266	99215745	ENSG00000241305.1	-	processed_pseudogene	KNOWN	ACTG1P13	1	1	0.005835
chr3	99326377	99326552	99326464	ENSG00000240572.1	-	processed_pseudogene	KNOWN	RP11-121C1.1	1	1	0.091992
chr3	99366801	99366889	99366845	ENSG00000266030.1	-	miRNA	NOVEL	AC078828.1	1	1	-0.146168
chr3	99500347	99505508	99502927	ENSG00000243296.1	+	lincRNA	KNOWN	RP11-779P15.1	1	2	-0.396627
chr3	99507187	99527113	99517150	ENSG00000243089.1	-	lincRNA	KNOWN	RP11-779P15.2	1	2	-0.072608
chr3	99598064	99623820	99610942	ENSG00000244464.1	+	lincRNA	KNOWN	RP11-201E8.1	1	2	-0.067036
chr3	99638475	99799226	99718850	ENSG00000144810.15	+	protein_coding	KNOWN	COL8A1	8	5	-0.055479
chr3	99691480	99691571	99691525	ENSG00000263810.1	-	miRNA	NOVEL	AC055723.1	1	1	-0.114459
chr3	99802699	99806058	99804378	ENSG00000273374.1	-	lincRNA	KNOWN	RP11-383I23.2	1	1	-0.013125
chr3	99817834	100178603	99998218	ENSG00000184220.10	+	protein_coding	KNOWN	CMSS1	9	10	-0.003991
chr3	99830141	100114513	99972327	ENSG00000168386.18	-	protein_coding	KNOWN	FILIP1L	10	6	-0.014618
chr3	99964314	99964398	99964356	ENSG00000264897.1	-	miRNA	KNOWN	MIR3921	1	1	-0.095635
chr3	100179567	100181732	100180649	ENSG00000261533.2	+	sense_overlapping	KNOWN	RP11-15N24.4	1	1	0.020831
chr3	100185824	100194191	100190007	ENSG00000235156.4	+	protein_coding	KNOWN	TMEM30C	2	3	0.092137
chr3	100221268	100223858	100222563	ENSG00000277000.1	-	unprocessed_pseudogene	KNOWN	DUSP12P1	1	4	0.214476
chr3	100225374	100226073	100225723	ENSG00000243974.1	+	processed_pseudogene	KNOWN	VTI1BP1	1	1	0.214476
chr3	100261000	100325251	100293125	ENSG00000036054.12	+	protein_coding	KNOWN	TBC1D23	9	19	-0.003452
chr3	100334701	100361635	100348168	ENSG00000114021.11	+	protein_coding	KNOWN	NIT2	7	10	0.150956
chr3	100363431	100401398	100382414	ENSG00000154174.7	-	protein_coding	KNOWN	TOMM70A	3	12	-0.022790
chr3	100401193	100456319	100428756	ENSG00000206535.7	+	protein_coding	KNOWN	LNP1	3	4	-0.069815
chr3	100492619	100577444	100535031	ENSG00000181458.10	+	protein_coding	KNOWN	TMEM45A	7	8	0.185225
chr3	100609589	100695479	100652534	ENSG00000144820.7	+	protein_coding	KNOWN	ADGRG7	5	16	-0.254219
chr3	100646121	100646197	100646159	ENSG00000252989.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.268303
chr3	100665050	100665476	100665263	ENSG00000243495.1	-	processed_pseudogene	KNOWN	GMFBP1	1	1	0.023044
chr3	100709331	100748966	100729148	ENSG00000114354.12	+	protein_coding	KNOWN	TFG	11	9	-0.240926
chr3	100749156	100993515	100871335	ENSG00000154175.16	-	protein_coding	KNOWN	ABI3BP	29	67	-0.205957
chr3	100910975	100912175	100911575	ENSG00000213431.4	-	processed_pseudogene	KNOWN	RP11-301G23.1	1	1	-0.179310
chr3	100952627	100952733	100952680	ENSG00000201642.1	+	snRNA	KNOWN	RNU6-865P	1	1	-0.352572
chr3	101163094	101163986	101163540	ENSG00000242573.1	+	processed_pseudogene	KNOWN	ACTR3P3	1	1	0.138088
chr3	101222546	101320560	101271553	ENSG00000081148.11	-	protein_coding	KNOWN	IMPG2	1	19	-0.296215
chr3	101324205	101513241	101418723	ENSG00000138468.15	-	protein_coding	KNOWN	SENP7	8	24	-0.181485
chr3	101357292	101359242	101358267	ENSG00000241738.1	+	processed_pseudogene	KNOWN	ZNF90P1	1	1	-0.244436
chr3	101414228	101414633	101414430	ENSG00000232830.5	+	processed_pseudogene	KNOWN	RP11-144C15.1	1	1	-0.231953
chr3	101457241	101457732	101457486	ENSG00000282978.1	-	processed_pseudogene	KNOWN	RP11-144C15.2	1	1	0.065840
chr3	101458530	101458626	101458578	ENSG00000201554.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.065840
chr3	101521891	101522979	101522435	ENSG00000175841.8	+	processed_pseudogene	KNOWN	FAM172BP	1	1	-0.066512
chr3	101561862	101566446	101564154	ENSG00000174173.6	+	protein_coding	KNOWN	TRMT10C	2	2	0.303496
chr3	101574095	101594437	101584266	ENSG00000081154.11	+	protein_coding	KNOWN	PCNP	8	5	0.250805
chr3	101576489	101576947	101576718	ENSG00000242299.1	-	processed_pseudogene	KNOWN	RP11-234A1.1	1	1	0.283651
chr3	101599243	101599644	101599443	ENSG00000243396.1	-	processed_pseudogene	KNOWN	RP11-454H13.1	1	1	0.133097
chr3	101615826	101615928	101615877	ENSG00000252348.1	+	snRNA	KNOWN	RNU6-1256P	1	1	0.091992
chr3	101628310	101628406	101628358	ENSG00000212319.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.091992
chr3	101647421	101647522	101647471	ENSG00000201511.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.011386
chr3	101648889	101677495	101663192	ENSG00000066422.4	-	protein_coding	KNOWN	ZBTB11	3	11	0.132196
chr3	101662060	101662164	101662112	ENSG00000201121.1	-	misc_RNA	KNOWN	RNY1P12	1	1	0.068533
chr3	101676475	101679217	101677846	ENSG00000256628.3	+	antisense	KNOWN	ZBTB11-AS1	1	1	0.323317
chr3	101681091	101686782	101683936	ENSG00000114391.12	-	protein_coding	KNOWN	RPL24	6	6	0.323317
chr3	101712472	101713191	101712831	ENSG00000244119.1	+	processed_pseudogene	KNOWN	PDCL3P4	1	1	-0.001118
chr3	101723925	101770562	101747243	ENSG00000182504.10	+	protein_coding	KNOWN	CEP97	6	11	-0.027983
chr3	101779202	101828229	101803715	ENSG00000144815.14	+	protein_coding	KNOWN	NXPE3	8	8	0.017743
chr3	101823793	101824998	101824395	ENSG00000249474.1	-	antisense	KNOWN	RP11-49I4.3	1	2	0.043082
chr3	101827991	101861022	101844506	ENSG00000144802.11	+	protein_coding	KNOWN	NFKBIZ	11	13	0.141130
chr3	101940859	101997926	101969392	ENSG00000214407.3	+	lincRNA	KNOWN	RP11-221J22.1	1	4	-0.088747
chr3	101955077	101955185	101955131	ENSG00000202177.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.091992
chr3	101960358	101997926	101979142	ENSG00000241280.1	+	lincRNA	KNOWN	RP11-221J22.2	2	3	-0.121023
chr3	102099244	102479841	102289542	ENSG00000170044.8	+	protein_coding	KNOWN	ZPLD1	4	18	-0.402813
chr3	102663163	102673913	102668538	ENSG00000241754.1	-	lincRNA	KNOWN	RP11-280H21.1	1	3	-0.661133
chr3	102755064	102755170	102755117	ENSG00000201065.1	-	snRNA	KNOWN	RNU6-461P	1	1	-0.159547
chr3	103159960	103160124	103160042	ENSG00000201922.1	+	snRNA	KNOWN	RNU1-43P	1	1	-0.720148
chr3	103240987	103241230	103241108	ENSG00000236691.3	+	processed_pseudogene	KNOWN	NDUFA4P2	1	1	-0.623555
chr3	103524033	103524116	103524074	ENSG00000265328.1	-	miRNA	KNOWN	MIR548AB	1	1	-0.389135
chr3	103538635	103540487	103539561	ENSG00000240107.1	-	processed_pseudogene	KNOWN	RP11-628J14.1	1	1	-0.852665
chr3	103630661	103630912	103630786	ENSG00000243195.1	+	processed_pseudogene	KNOWN	TUBBP11	1	1	-0.487790
chr3	104054708	104054796	104054752	ENSG00000265076.1	-	miRNA	NOVEL	AC016970.1	1	1	-0.545438
chr3	104063039	104063582	104063310	ENSG00000214405.3	+	processed_pseudogene	KNOWN	RAP1BP2	1	1	-0.545438
chr3	104502700	104503266	104502983	ENSG00000243635.1	+	processed_pseudogene	KNOWN	RP11-281P11.1	1	1	-0.421348
chr3	104742180	104742270	104742225	ENSG00000276619.1	-	miRNA	NOVEL	AC069070.1	1	1	-0.739032
chr3	105107659	105107756	105107707	ENSG00000278575.1	+	miRNA	NOVEL	AC092913.1	1	1	-0.323046
chr3	105366909	105576900	105471904	ENSG00000170017.12	+	protein_coding	KNOWN	ALCAM	9	16	-0.283512
chr3	105655461	105869552	105762506	ENSG00000114423.18	-	protein_coding	KNOWN	CBLB	9	19	-0.155962
chr3	106325737	106326293	106326015	ENSG00000244652.1	-	processed_pseudogene	KNOWN	RP11-93B21.1	1	1	-0.249565
chr3	106515897	106515998	106515947	ENSG00000200610.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.309213
chr3	106688678	106688779	106688728	ENSG00000200361.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.345072
chr3	106836811	107240641	107038726	ENSG00000242759.6	-	lincRNA	KNOWN	LINC00882	7	8	-0.231414
chr3	106848671	106849260	106848965	ENSG00000239997.1	+	processed_pseudogene	KNOWN	FCF1P3	1	1	0.065520
chr3	106894352	106895718	106895035	ENSG00000241787.1	-	unprocessed_pseudogene	KNOWN	MTND4P16	1	1	-0.374093
chr3	106895729	106896408	106896068	ENSG00000239632.1	-	unprocessed_pseudogene	KNOWN	MTND4LP3	1	2	-0.374093
chr3	106896483	106896821	106896652	ENSG00000242214.1	-	unprocessed_pseudogene	KNOWN	MTND3P6	1	1	-0.374093
chr3	106896891	106897671	106897281	ENSG00000242836.1	-	unprocessed_pseudogene	KNOWN	RP11-52L11.7	1	1	-0.374093
chr3	106897671	106898268	106897969	ENSG00000249580.1	-	unprocessed_pseudogene	KNOWN	RP11-52L11.6	1	1	-0.374093
chr3	106898889	106900591	106899740	ENSG00000243658.1	+	unprocessed_pseudogene	KNOWN	MTND5P16	1	1	-0.374093
chr3	106900593	106900855	106900724	ENSG00000240034.1	-	unprocessed_pseudogene	KNOWN	MTND6P6	1	1	-0.374093
chr3	106900854	106901081	106900967	ENSG00000250630.1	-	unprocessed_pseudogene	KNOWN	RP11-52L11.4	1	1	-0.374093
chr3	106901068	106901965	106901516	ENSG00000239586.1	+	unprocessed_pseudogene	KNOWN	MTND1P16	1	1	-0.374093
chr3	106902173	106902523	106902348	ENSG00000240796.1	+	unprocessed_pseudogene	KNOWN	MTND2P14	1	1	-0.374093
chr3	107007568	107007670	107007619	ENSG00000252626.1	+	snRNA	KNOWN	RNU6-1308P	1	1	-0.307939
chr3	107104911	107107000	107105955	ENSG00000239455.1	-	processed_pseudogene	KNOWN	RP11-561O4.1	1	2	-0.292019
chr3	107240692	107326964	107283828	ENSG00000243701.5	+	lincRNA	KNOWN	DUBR	5	4	-0.140641
chr3	107272611	107421304	107346957	ENSG00000239828.6	-	lincRNA	KNOWN	RP11-446H18.5	10	5	-0.238084
chr3	107327830	107329197	107328513	ENSG00000241218.1	-	processed_pseudogene	KNOWN	RP11-446H18.1	1	1	-0.240278
chr3	107329430	107329962	107329696	ENSG00000272597.1	+	lincRNA	KNOWN	RP11-446H18.6	1	1	-0.240278
chr3	107365182	107365287	107365234	ENSG00000220989.1	+	miRNA	NOVEL	AC063944.1	1	1	-0.652967
chr3	107377194	107378637	107377915	ENSG00000138483.2	+	protein_coding	KNOWN	CCDC54	1	1	-0.279977
chr3	107430930	107463912	107447421	ENSG00000273125.1	+	lincRNA	KNOWN	RP11-115H18.1	1	3	-0.062965
chr3	107522936	107811324	107667130	ENSG00000114439.18	+	protein_coding	KNOWN	BBX	26	18	-0.297841
chr3	107840228	107882000	107861114	ENSG00000241469.7	-	lincRNA	KNOWN	LINC00635	24	11	-0.100615
chr3	107883248	107928907	107906077	ENSG00000240423.1	+	lincRNA	KNOWN	LINC00636	1	3	-0.406522
chr3	108036718	108038445	108037581	ENSG00000279277.1	-	TEC	KNOWN	RP11-861A13.3	1	1	0.155768
chr3	108043298	108091025	108067161	ENSG00000196776.14	-	protein_coding	KNOWN	CD47	5	11	-0.153147
chr3	108125821	108138610	108132215	ENSG00000271856.1	+	lincRNA	KNOWN	LINC01215	1	3	-0.133615
chr3	108160812	108222570	108191691	ENSG00000114446.4	-	protein_coding	KNOWN	IFT57	6	11	-0.446136
chr3	108296490	108378285	108337387	ENSG00000114455.13	+	protein_coding	KNOWN	HHLA2	11	11	-0.455041
chr3	108320392	108320478	108320435	ENSG00000221724.1	+	miRNA	NOVEL	AC078855.1	1	1	-0.519236
chr3	108325520	108326814	108326167	ENSG00000243188.1	-	unprocessed_pseudogene	KNOWN	HNRNPA1P17	1	2	-0.519236
chr3	108380369	108529322	108454845	ENSG00000144821.9	-	protein_coding	KNOWN	MYH15	3	42	-0.305237
chr3	108543367	108543875	108543621	ENSG00000241634.1	-	processed_pseudogene	KNOWN	RP11-381E24.1	1	1	-0.281467
chr3	108549869	108589644	108569756	ENSG00000163507.13	-	protein_coding	KNOWN	KIAA1524	8	22	-0.463614
chr3	108574565	108574698	108574631	ENSG00000202379.1	+	snoRNA	NOVEL	SNORA70	1	1	-0.708071
chr3	108574683	108575064	108574873	ENSG00000276763.1	+	processed_pseudogene	KNOWN	RP11-381E24.4	1	1	-0.708071
chr3	108585964	108586229	108586096	ENSG00000280684.1	+	protein_coding	KNOWN	AC069499.1	1	2	-0.708071
chr3	108589682	108694846	108642264	ENSG00000198919.12	+	protein_coding	KNOWN	DZIP3	6	33	-0.412014
chr3	108725440	108725536	108725488	ENSG00000241777.1	-	unprocessed_pseudogene	KNOWN	RP11-148O7.2	1	1	-0.395123
chr3	108743424	108757384	108750404	ENSG00000163515.6	-	protein_coding	KNOWN	RETNLB	2	5	-0.297587
chr3	108822698	108855005	108838851	ENSG00000163519.13	+	protein_coding	KNOWN	TRAT1	5	6	-0.481478
chr3	108907792	108953895	108930843	ENSG00000138472.10	-	protein_coding	KNOWN	GUCA1C	3	4	-0.409696
chr3	108958239	109118142	109038190	ENSG00000114487.9	-	protein_coding	KNOWN	MORC1	2	28	-0.567533
chr3	109018909	109019116	109019012	ENSG00000221633.2	-	snoRNA	NOVEL	U3	1	1	-0.549215
chr3	109101456	109110342	109105899	ENSG00000239314.1	+	antisense	KNOWN	MORC1-AS1	1	3	-0.748332
chr3	109118252	109150514	109134383	ENSG00000241224.6	+	lincRNA	KNOWN	FLJ22763	8	3	-0.532169
chr3	109176438	109177365	109176901	ENSG00000261364.1	-	lincRNA	KNOWN	RP11-59E19.4	1	1	-0.508401
chr3	109178165	109185257	109181711	ENSG00000214381.4	+	lincRNA	KNOWN	LINC00488	1	3	-0.508401
chr3	109225129	109225227	109225178	ENSG00000252889.1	+	snRNA	KNOWN	RNU6-1236P	1	1	0.233720
chr3	109241507	109243125	109242316	ENSG00000239288.1	+	processed_pseudogene	KNOWN	RP11-59E19.3	1	1	-0.628391
chr3	109293788	109316517	109305152	ENSG00000163530.4	-	protein_coding	KNOWN	DPPA2	1	9	-0.361148
chr3	109295239	109295498	109295368	ENSG00000277635.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.550976
chr3	109326141	109337572	109331856	ENSG00000121570.12	-	protein_coding	KNOWN	DPPA4	8	7	-0.124886
chr3	109364047	109364234	109364140	ENSG00000241257.1	-	processed_pseudogene	KNOWN	RP11-397K18.1	1	1	-0.489238
chr3	109396616	109397870	109397243	ENSG00000244561.1	+	processed_pseudogene	KNOWN	RP11-702L6.1	1	2	-0.162429
chr3	109409678	109410084	109409881	ENSG00000230618.3	-	processed_pseudogene	KNOWN	H3F3AP3	1	1	-0.207579
chr3	109409990	109495167	109452578	ENSG00000228980.3	+	lincRNA	KNOWN	LINC01205	2	5	-0.252439
chr3	109471329	109471812	109471570	ENSG00000244196.1	-	processed_pseudogene	KNOWN	PPIAP15	1	1	-0.190151
chr3	109497645	109497729	109497687	ENSG00000252541.1	+	miRNA	NOVEL	AC092905.1	1	1	-0.521950
chr3	109602828	109602897	109602862	ENSG00000265956.1	+	miRNA	KNOWN	MIR4445	1	1	-0.112990
chr3	109648107	109810861	109729484	ENSG00000242029.1	+	lincRNA	KNOWN	RP11-457K10.1	1	3	-0.432095
chr3	109701456	109702218	109701837	ENSG00000271249.1	-	processed_pseudogene	KNOWN	RP11-424I3.1	1	1	-0.157528
chr3	109915976	109916940	109916458	ENSG00000214380.4	-	processed_pseudogene	KNOWN	RP11-457K10.2	1	2	-0.726561
chr3	109977540	109977767	109977653	ENSG00000243945.1	-	processed_pseudogene	KNOWN	RP11-696F10.1	1	1	-0.112828
chr3	110527482	110529582	110528532	ENSG00000240895.1	-	lincRNA	KNOWN	RP11-119D18.1	1	4	-0.133075
chr3	110551845	110551965	110551905	ENSG00000221206.1	-	snRNA	KNOWN	RNU6ATAC15P	1	1	-0.338248
chr3	110682286	110683154	110682720	ENSG00000244722.1	-	processed_pseudogene	KNOWN	RPSAP29	1	1	-0.136277
chr3	110727021	110727121	110727071	ENSG00000201426.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.078941
chr3	110888384	110893476	110890930	ENSG00000206532.2	-	lincRNA	KNOWN	RP11-553A10.1	2	3	-0.287071
chr3	110893708	111071553	110982630	ENSG00000242242.5	-	antisense	KNOWN	PVRL3-AS1	5	4	-0.283037
chr3	111070071	111275563	111172817	ENSG00000177707.10	+	protein_coding	KNOWN	PVRL3	11	9	-0.220742
chr3	111292719	111665750	111479234	ENSG00000153283.12	+	protein_coding	KNOWN	CD96	7	15	-0.258592
chr3	111466313	111497095	111481704	ENSG00000239311.1	-	lincRNA	KNOWN	RP11-615J4.3	1	2	-0.170717
chr3	111478737	111478943	111478840	ENSG00000244142.1	+	processed_pseudogene	KNOWN	ATP6V0CP2	1	1	-0.040646
chr3	111570638	111571054	111570846	ENSG00000240787.1	-	processed_pseudogene	KNOWN	RP11-615J4.4	1	1	-0.333538
chr3	111592900	111595443	111594171	ENSG00000177494.5	-	protein_coding	KNOWN	ZBED2	1	2	0.122049
chr3	111633672	111635089	111634380	ENSG00000244720.1	+	processed_pseudogene	KNOWN	RP11-402J7.2	1	3	0.053772
chr3	111674676	111846447	111760561	ENSG00000240891.6	+	protein_coding	KNOWN	PLCXD2	5	5	0.033142
chr3	111676736	111677433	111677084	ENSG00000240766.1	-	antisense	KNOWN	PLCXD2-AS1	1	2	0.254612
chr3	111732497	111976517	111854507	ENSG00000144824.19	+	protein_coding	KNOWN	PHLDB2	15	18	0.039656
chr3	111979010	111993363	111986186	ENSG00000144827.8	+	protein_coding	KNOWN	ABHD10	5	6	-0.055172
chr3	111998664	112013887	112006275	ENSG00000144834.12	+	protein_coding	KNOWN	TAGLN3	8	8	0.005361
chr3	112030931	112031649	112031290	ENSG00000239439.1	-	processed_pseudogene	KNOWN	RFKP2	1	2	-0.118687
chr3	112034843	112081269	112058056	ENSG00000176040.13	+	protein_coding	KNOWN	TMPRSS7	5	18	-0.085986
chr3	112086335	112131004	112108669	ENSG00000114529.12	+	protein_coding	KNOWN	C3orf52	7	6	0.199020
chr3	112112801	112112898	112112849	ENSG00000207940.1	+	miRNA	KNOWN	MIR567	1	1	0.169994
chr3	112120841	112133305	112127073	ENSG00000174500.12	-	protein_coding	KNOWN	GCSAM	7	7	0.063421
chr3	112133423	112135359	112134391	ENSG00000261488.1	+	antisense	KNOWN	RP11-757F18.5	1	1	-0.231797
chr3	112140887	112294258	112217572	ENSG00000172139.14	-	protein_coding	KNOWN	SLC9C1	5	29	-0.390555
chr3	112185480	112185998	112185739	ENSG00000244144.1	-	processed_pseudogene	KNOWN	RP11-757F18.3	1	1	-0.149016
chr3	112302478	112332791	112317634	ENSG00000239482.6	+	lincRNA	KNOWN	RP11-90K6.1	2	5	-0.398505
chr3	112332347	112362812	112347579	ENSG00000091972.18	+	protein_coding	KNOWN	CD200	8	7	-0.446818
chr3	112396647	112409134	112402890	ENSG00000243081.2	-	lincRNA	KNOWN	RP11-231E6.1	1	2	-0.171043
chr3	112463968	112499561	112481764	ENSG00000186265.9	-	protein_coding	KNOWN	BTLA	4	5	-0.304997
chr3	112524187	112525201	112524694	ENSG00000242525.1	-	unprocessed_pseudogene	KNOWN	OR7E100P	1	1	-0.198458
chr3	112525548	112528142	112526845	ENSG00000279349.1	-	TEC	KNOWN	RP11-147G7.3	1	1	-0.198458
chr3	112532509	112562046	112547277	ENSG00000144848.10	-	protein_coding	KNOWN	ATG3	9	12	-0.513329
chr3	112561709	112585577	112573643	ENSG00000138459.8	+	protein_coding	KNOWN	SLC35A5	7	8	-0.224922
chr3	112596794	112649530	112623162	ENSG00000091986.15	-	protein_coding	KNOWN	CCDC80	8	8	-0.085156
chr3	112696908	112697706	112697307	ENSG00000242308.2	-	unprocessed_pseudogene	KNOWN	RP11-572C15.3	1	2	0.295738
chr3	112736447	112749319	112742883	ENSG00000240893.1	-	lincRNA	KNOWN	RP11-572C15.5	1	5	-0.181332
chr3	112802478	112812819	112807648	ENSG00000242770.2	+	processed_transcript	KNOWN	RP11-180K7.1	2	3	-0.052490
chr3	112815709	112846856	112831282	ENSG00000206531.10	-	protein_coding	KNOWN	CD200R1L	5	8	0.015524
chr3	112921209	112975122	112948165	ENSG00000163606.10	-	protein_coding	KNOWN	CD200R1	5	8	-0.488503
chr3	112990447	112991153	112990800	ENSG00000272844.1	-	antisense	KNOWN	RP11-484K9.4	1	1	-0.262785
chr3	112990918	113015060	113002989	ENSG00000163607.14	+	protein_coding	KNOWN	GTPBP8	9	13	-0.186658
chr3	113002440	113019861	113011150	ENSG00000163608.14	-	protein_coding	KNOWN	C3orf17	24	9	-0.057212
chr3	113019532	113183301	113101416	ENSG00000240057.5	+	antisense	KNOWN	RP11-572M11.4	6	4	0.083633
chr3	113041390	113041814	113041602	ENSG00000243483.1	-	processed_pseudogene	KNOWN	RP11-572M11.2	1	1	0.153067
chr3	113050912	113063443	113057177	ENSG00000241219.1	-	lincRNA	KNOWN	RP11-572M11.1	1	3	0.171162
chr3	113092444	113092525	113092484	ENSG00000238593.1	-	miRNA	NOVEL	AC078785.1	1	1	0.243058
chr3	113142350	113167819	113155084	ENSG00000243795.1	-	lincRNA	KNOWN	RP11-572M11.3	1	4	-0.130717
chr3	113211003	113287459	113249231	ENSG00000144857.14	+	protein_coding	KNOWN	BOC	17	20	0.205557
chr3	113286930	113441610	113364270	ENSG00000206530.8	-	protein_coding	KNOWN	CFAP44	14	35	-0.237704
chr3	113360267	113361319	113360793	ENSG00000240751.1	+	processed_pseudogene	KNOWN	RP11-553D4.2	1	1	-0.081838
chr3	113403991	113433992	113418991	ENSG00000243849.1	+	antisense	KNOWN	CFAP44-AS1	2	6	-0.329336
chr3	113432118	113432200	113432159	ENSG00000275670.1	-	miRNA	KNOWN	MIR8076	1	1	-0.444061
chr3	113442718	113515187	113478952	ENSG00000163611.11	-	protein_coding	KNOWN	SPICE1	7	18	-0.280862
chr3	113532296	113629578	113580937	ENSG00000072858.10	+	protein_coding	KNOWN	SIDT1	12	26	-0.248000
chr3	113588748	113590189	113589468	ENSG00000239453.1	-	antisense	KNOWN	SIDT1-AS1	1	2	-0.236218
chr3	113594876	113594942	113594909	ENSG00000265253.1	+	miRNA	KNOWN	MIR4446	1	1	-0.277582
chr3	113632704	113632998	113632851	ENSG00000241529.3	+	misc_RNA	KNOWN	RN7SL767P	1	1	0.342399
chr3	113648385	113696646	113672515	ENSG00000176542.9	-	protein_coding	KNOWN	USF3	4	7	-0.223913
chr3	113716460	113746300	113731380	ENSG00000121579.12	-	protein_coding	KNOWN	NAA50	11	5	-0.153125
chr3	113740823	113741254	113741038	ENSG00000239280.1	-	processed_pseudogene	KNOWN	RP11-271C24.3	1	1	-0.188116
chr3	113746872	113747408	113747140	ENSG00000242659.1	-	lincRNA	KNOWN	RP11-271C24.2	1	2	-0.188116
chr3	113747019	113812056	113779537	ENSG00000114573.9	+	protein_coding	KNOWN	ATP6V1A	6	16	0.070247
chr3	113828182	113947174	113887678	ENSG00000178075.19	+	protein_coding	KNOWN	GRAMD1C	15	19	-0.075699
chr3	113850237	113850731	113850484	ENSG00000240776.1	-	processed_pseudogene	KNOWN	RP11-435F17.1	1	1	-0.050027
chr3	113885298	113886031	113885664	ENSG00000241889.1	+	processed_pseudogene	KNOWN	RP11-435F17.3	1	1	0.027452
chr3	113919222	113920200	113919711	ENSG00000240375.1	+	processed_pseudogene	KNOWN	VPS26AP1	1	1	0.025321
chr3	113947005	113947570	113947287	ENSG00000273394.1	-	antisense	KNOWN	RP11-255E6.6	1	1	-0.388634
chr3	113947901	113965401	113956651	ENSG00000184307.13	+	protein_coding	KNOWN	ZDHHC23	6	7	-0.121882
chr3	113964137	114056613	114010375	ENSG00000163617.10	-	protein_coding	KNOWN	CCDC191	8	17	-0.239723
chr3	113984037	113984655	113984346	ENSG00000270880.1	+	processed_pseudogene	KNOWN	RP11-255E6.5	1	1	-0.227945
chr3	114005833	114088422	114047127	ENSG00000151576.10	+	protein_coding	KNOWN	QTRTD1	16	10	-0.257042
chr3	114019651	114019752	114019701	ENSG00000216136.2	+	miRNA	NOVEL	AC092896.1	1	1	-0.100653
chr3	114103249	114103628	114103438	ENSG00000240912.1	-	processed_pseudogene	KNOWN	RP11-274J15.2	1	1	-0.213300
chr3	114128652	114199407	114164029	ENSG00000151577.12	-	protein_coding	KNOWN	DRD3	4	8	-0.102359
chr3	114214313	114236204	114225258	ENSG00000241490.1	+	antisense	KNOWN	RP11-553L6.2	2	3	-0.147980
chr3	114231398	114233021	114232209	ENSG00000240487.1	-	processed_pseudogene	KNOWN	RP11-553L6.3	1	1	0.001018
chr3	114234631	114237578	114236104	ENSG00000174255.6	-	protein_coding	KNOWN	ZNF80	3	2	0.001018
chr3	114276913	114310288	114293600	ENSG00000181847.11	+	protein_coding	KNOWN	TIGIT	7	5	-0.364728
chr3	114314501	114316179	114315340	ENSG00000259976.1	-	lincRNA	KNOWN	RP11-553L6.5	1	1	-0.511210
chr3	114316475	114316569	114316522	ENSG00000207770.1	-	miRNA	KNOWN	MIR568	1	1	-0.511210
chr3	114338094	115147271	114742682	ENSG00000181722.15	-	protein_coding	KNOWN	ZBTB20	20	12	-0.336853
chr3	114351811	114388978	114370394	ENSG00000241560.5	+	antisense	KNOWN	ZBTB20-AS1	5	9	-0.187576
chr3	114445521	114529452	114487486	ENSG00000242290.2	+	lincRNA	KNOWN	RP11-197K3.1	3	5	-0.114589
chr3	114684580	114687609	114686094	ENSG00000241295.1	+	lincRNA	KNOWN	ZBTB20-AS2	1	2	-0.312629
chr3	114743433	114743543	114743488	ENSG00000264623.2	-	miRNA	NOVEL	AC078986.1	1	1	-0.447819
chr3	114873114	114876514	114874814	ENSG00000239946.1	+	lincRNA	KNOWN	ZBTB20-AS3	1	3	-0.348581
chr3	114930541	114931449	114930995	ENSG00000240002.1	+	processed_pseudogene	KNOWN	YBX1P3	1	1	-0.572824
chr3	115100423	115103061	115101742	ENSG00000242767.1	+	lincRNA	KNOWN	ZBTB20-AS4	1	2	-0.444061
chr3	115113420	115114210	115113815	ENSG00000279131.1	-	protein_coding	KNOWN	AC069063.1	1	2	-0.492971
chr3	115120172	115121489	115120830	ENSG00000279380.1	+	protein_coding	KNOWN	AC069063.2	1	1	-0.492971
chr3	115251196	115285347	115268271	ENSG00000242880.1	+	lincRNA	KNOWN	RP11-190P13.2	1	5	-0.325256
chr3	115279125	115279860	115279492	ENSG00000244157.1	+	processed_pseudogene	KNOWN	EIF4E2P2	1	1	-0.650210
chr3	115623324	115721490	115672407	ENSG00000172020.12	+	protein_coding	KNOWN	GAP43	2	4	-0.321714
chr3	115658533	115661279	115659906	ENSG00000241596.1	+	sense_intronic	KNOWN	RP11-326J18.1	1	2	-0.200189
chr3	115802363	117139389	116470876	ENSG00000185565.11	-	protein_coding	KNOWN	LSAMP	7	9	-0.520522
chr3	115837870	115838159	115838014	ENSG00000243359.3	+	misc_RNA	KNOWN	RN7SL815P	1	1	-0.484797
chr3	116360024	116370090	116365057	ENSG00000240922.1	+	antisense	KNOWN	LSAMP-AS1	1	4	-0.904955
chr3	116552473	116568264	116560368	ENSG00000241397.1	+	antisense	KNOWN	LINC00903	1	2	-0.531703
chr3	116582552	116582830	116582691	ENSG00000241156.3	-	misc_RNA	KNOWN	RN7SL582P	1	1	-0.571645
chr3	116645902	116646727	116646314	ENSG00000198406.7	-	processed_pseudogene	KNOWN	BZW1P2	1	1	-0.777948
chr3	116709235	116723581	116716408	ENSG00000243197.7	+	antisense	KNOWN	TUSC7	7	4	-0.677278
chr3	116716460	116716624	116716542	ENSG00000278072.1	+	misc_RNA	NOVEL	AC108713.1	1	1	-0.675347
chr3	116850277	116850367	116850322	ENSG00000265433.1	-	miRNA	KNOWN	MIR4447	1	1	-0.973597
chr3	116921328	116921479	116921403	ENSG00000274732.1	+	misc_RNA	NOVEL	BC040587	1	1	-0.654975
chr3	116921431	116932238	116926834	ENSG00000242385.1	+	antisense	KNOWN	LINC00901	1	2	-0.601139
chr3	116965112	116965227	116965169	ENSG00000200372.1	-	snRNA	KNOWN	RNU5E-8P	1	1	-0.240991
chr3	117026698	117027039	117026868	ENSG00000243014.1	+	processed_pseudogene	KNOWN	PTMAP8	1	1	-1.039253
chr3	117544205	117544311	117544258	ENSG00000206889.1	+	snRNA	KNOWN	RNU6-1200P	1	1	-0.400405
chr3	117672154	117997592	117834873	ENSG00000239268.2	-	lincRNA	KNOWN	RP11-384F7.2	1	2	-0.512178
chr3	117674342	117675144	117674743	ENSG00000240393.1	-	processed_pseudogene	KNOWN	RP11-768G7.1	1	1	-0.596064
chr3	117678693	117690932	117684812	ENSG00000241213.1	-	lincRNA	KNOWN	RP11-768G7.2	3	4	-0.556566
chr3	117790673	117793765	117792219	ENSG00000242816.1	+	lincRNA	KNOWN	RP11-768G7.3	1	2	-0.478097
chr3	118004819	118557668	118281243	ENSG00000243276.5	-	lincRNA	KNOWN	RP11-384F7.1	2	7	-0.557815
chr3	118900557	119146068	119023312	ENSG00000144847.12	-	protein_coding	KNOWN	IGSF11	10	9	-0.496720
chr3	118943073	118948241	118945657	ENSG00000239877.2	+	antisense	KNOWN	IGSF11-AS1	1	4	-0.698780
chr3	119146150	119160042	119153096	ENSG00000163424.8	+	protein_coding	KNOWN	C3orf30	5	4	-0.195407
chr3	119147375	119187807	119167591	ENSG00000251012.1	+	protein_coding	KNOWN	RP11-484M3.5	1	2	-0.134975
chr3	119173517	119205153	119189335	ENSG00000114638.7	+	protein_coding	KNOWN	UPK1B	5	8	0.040197
chr3	119211732	119241103	119226417	ENSG00000121578.12	-	protein_coding	KNOWN	B4GALT4	20	9	0.021218
chr3	119226486	119290666	119258576	ENSG00000240254.1	+	antisense	KNOWN	B4GALT4-AS1	1	4	-0.212094
chr3	119294373	119420714	119357543	ENSG00000031081.10	+	protein_coding	KNOWN	ARHGAP31	2	12	0.214765
chr3	119298665	119299012	119298838	ENSG00000242829.1	+	processed_pseudogene	KNOWN	RPS26P21	1	1	-0.049254
chr3	119314293	119322760	119318526	ENSG00000241155.1	-	antisense	KNOWN	ARHGAP31-AS1	1	2	0.246213
chr3	119341834	119341940	119341887	ENSG00000207310.1	-	snRNA	KNOWN	RNU6-1127P	1	1	0.288684
chr3	119429500	119468830	119449165	ENSG00000176142.12	-	protein_coding	KNOWN	TMEM39A	12	10	-0.136320
chr3	119468938	119494708	119481823	ENSG00000163389.10	+	protein_coding	KNOWN	POGLUT1	8	11	0.107542
chr3	119497678	119498181	119497929	ENSG00000272662.1	-	lincRNA	KNOWN	RP11-190C22.8	1	1	0.214248
chr3	119498532	119525090	119511811	ENSG00000113845.9	+	protein_coding	KNOWN	TIMMDC1	9	7	-0.047208
chr3	119524293	119559602	119541947	ENSG00000121594.11	-	protein_coding	KNOWN	CD80	4	7	0.022796
chr3	119579212	119579650	119579431	ENSG00000272967.1	-	antisense	KNOWN	RP11-190C22.9	1	1	0.001018
chr3	119579268	119589945	119584606	ENSG00000144843.11	+	protein_coding	KNOWN	ADPRH	7	5	0.001018
chr3	119597842	119629811	119613826	ENSG00000144837.8	+	protein_coding	KNOWN	PLA1A	6	11	-0.023284
chr3	119635526	119636150	119635838	ENSG00000242052.1	-	processed_pseudogene	KNOWN	RP11-190C22.1	1	1	0.296682
chr3	119636457	119665324	119650890	ENSG00000121577.13	-	protein_coding	KNOWN	POPDC2	9	6	0.107320
chr3	119654513	119677454	119665983	ENSG00000138495.6	-	protein_coding	KNOWN	COX17	7	4	-0.166964
chr3	119703022	119767102	119735062	ENSG00000183833.16	+	protein_coding	KNOWN	MAATS1	16	18	-0.174841
chr3	119744139	119750350	119747244	ENSG00000239994.2	-	antisense	KNOWN	RP11-169N13.4	1	3	-0.222257
chr3	119780484	119818485	119799484	ENSG00000144852.16	+	protein_coding	KNOWN	NR1I2	5	9	0.117194
chr3	119791829	119792553	119792191	ENSG00000240471.1	+	processed_pseudogene	KNOWN	PHBP8	1	1	0.134220
chr3	119821323	120094417	119957870	ENSG00000082701.14	-	protein_coding	KNOWN	GSK3B	4	12	-0.139219
chr3	120028740	120029868	120029304	ENSG00000239835.1	+	processed_pseudogene	KNOWN	RP11-767L7.1	1	1	-0.038069
chr3	120041190	120041537	120041363	ENSG00000241546.1	+	processed_pseudogene	KNOWN	RP11-767L7.2	1	1	-0.338643
chr3	120084550	120084657	120084603	ENSG00000276607.2	-	miRNA	NOVEL	AC092910.1	1	1	-0.136036
chr3	120094895	120136783	120115839	ENSG00000242622.1	+	lincRNA	KNOWN	RP11-18H7.1	3	6	0.233799
chr3	120110498	120110786	120110642	ENSG00000244308.2	-	misc_RNA	KNOWN	RN7SL762P	1	1	0.180348
chr3	120121909	120122206	120122057	ENSG00000244139.3	+	misc_RNA	KNOWN	RN7SL397P	1	1	0.180348
chr3	120164645	120285094	120224869	ENSG00000175697.10	-	protein_coding	KNOWN	GPR156	5	10	-0.009894
chr3	120210320	120210421	120210370	ENSG00000206721.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.390160
chr3	120306726	120307952	120307339	ENSG00000240882.1	+	processed_pseudogene	KNOWN	RP11-174O3.1	1	1	0.277405
chr3	120324509	120349339	120336924	ENSG00000163428.3	-	protein_coding	KNOWN	LRRC58	1	4	-0.324939
chr3	120349716	120423826	120386771	ENSG00000240661.2	+	unitary_pseudogene	KNOWN	RP11-174O3.3	3	5	0.098956
chr3	120365993	120368326	120367159	ENSG00000282950.1	-	lincRNA	KNOWN	RP11-174O3.6	1	3	-0.051133
chr3	120388029	120389315	120388672	ENSG00000242613.1	+	processed_pseudogene	KNOWN	RP11-174O3.4	1	2	0.063423
chr3	120392293	120451253	120421773	ENSG00000163430.9	-	protein_coding	KNOWN	FSTL1	10	11	0.425961
chr3	120484171	120484527	120484349	ENSG00000240774.1	-	processed_pseudogene	KNOWN	RP11-359H3.4	1	1	0.045944
chr3	120512850	120513188	120513019	ENSG00000244441.1	+	processed_pseudogene	KNOWN	RP11-359H3.1	1	1	-0.097042
chr3	120596309	120602500	120599404	ENSG00000065518.7	+	protein_coding	KNOWN	NDUFB4	6	3	-0.033539
chr3	120628173	120682571	120655372	ENSG00000113924.11	-	protein_coding	KNOWN	HGD	10	14	0.006887
chr3	120686681	120742993	120714837	ENSG00000144840.8	-	protein_coding	KNOWN	RABL3	8	9	-0.124668
chr3	120722024	120722311	120722167	ENSG00000240452.1	+	unprocessed_pseudogene	KNOWN	MTCO1P29	1	1	-0.196634
chr3	120722458	120722646	120722552	ENSG00000243257.1	+	unprocessed_pseudogene	KNOWN	RP11-567P17.2	1	1	-0.196634
chr3	120742637	120783069	120762853	ENSG00000153767.9	+	protein_coding	KNOWN	GTF2E1	5	5	-0.037625
chr3	120805866	120806745	120806305	ENSG00000213371.4	+	processed_pseudogene	KNOWN	NAP1L1P3	1	1	-0.122747
chr3	120833440	120836360	120834900	ENSG00000243593.1	-	lincRNA	KNOWN	RP11-500K19.1	1	2	-0.378638
chr3	120908072	121424761	121166416	ENSG00000145087.12	+	protein_coding	KNOWN	STXBP5L	8	28	-0.523096
chr3	120924612	120925158	120924885	ENSG00000270782.1	-	processed_pseudogene	KNOWN	RP11-500K19.2	1	2	-0.414469
chr3	121049640	121049715	121049677	ENSG00000264477.1	+	miRNA	KNOWN	MIR5682	1	1	-0.899075
chr3	121099108	121099774	121099441	ENSG00000243813.1	+	processed_pseudogene	KNOWN	RP11-678L1.1	1	1	-0.317529
chr3	121356991	121357940	121357465	ENSG00000242103.1	+	processed_pseudogene	KNOWN	RP11-10G15.4	1	1	-0.496875
chr3	121431427	121546641	121489034	ENSG00000051341.13	-	protein_coding	KNOWN	POLQ	4	31	-0.277050
chr3	121494110	121494908	121494509	ENSG00000242445.1	+	processed_pseudogene	KNOWN	RPL7AP11	1	1	-0.398147
chr3	121570704	121586634	121578669	ENSG00000186103.3	+	protein_coding	KNOWN	ARGFX	1	4	-0.393435
chr3	121593119	121630295	121611707	ENSG00000163833.7	+	protein_coding	KNOWN	FBXO40	1	4	-0.203007
chr3	121631399	121660927	121646163	ENSG00000180353.10	-	protein_coding	KNOWN	HCLS1	12	14	-0.363964
chr3	121653994	121654296	121654145	ENSG00000243544.3	-	misc_RNA	KNOWN	RN7SL172P	1	1	-0.349135
chr3	121655475	121655604	121655539	ENSG00000222057.1	-	snRNA	KNOWN	RNU4-62P	1	1	-0.349135
chr3	121663199	121749767	121706483	ENSG00000173230.15	-	protein_coding	KNOWN	GOLGB1	9	22	-0.307026
chr3	121769763	121835079	121802421	ENSG00000173226.16	-	protein_coding	KNOWN	IQCB1	7	15	-0.338917
chr3	121835183	121886526	121860854	ENSG00000145088.8	+	protein_coding	KNOWN	EAF2	5	6	-0.422462
chr3	121894089	121944102	121919095	ENSG00000163406.10	+	protein_coding	KNOWN	SLC15A2	7	22	-0.247996
chr3	121922098	121922182	121922140	ENSG00000263678.1	-	miRNA	NOVEL	AC072031.1	1	1	-0.139334
chr3	121987323	122022204	122004763	ENSG00000145103.12	-	protein_coding	KNOWN	ILDR1	5	8	-0.067591
chr3	122025195	122025304	122025249	ENSG00000202388.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.042101
chr3	122055366	122121139	122088252	ENSG00000114013.15	+	protein_coding	KNOWN	CD86	9	7	-0.326664
chr3	122183683	122286503	122235093	ENSG00000036828.13	+	protein_coding	KNOWN	CASR	3	7	-0.370088
chr3	122281853	122281922	122281887	ENSG00000221474.1	+	miRNA	NOVEL	AC068754.1	1	1	-0.403966
chr3	122317609	122318741	122318175	ENSG00000240236.1	+	processed_pseudogene	KNOWN	HNRNPA1P23	1	1	-0.214435
chr3	122325244	122341972	122333608	ENSG00000121552.3	+	protein_coding	KNOWN	CSTA	2	3	-0.213993
chr3	122359591	122383231	122371411	ENSG00000160124.9	-	protein_coding	KNOWN	CCDC58	7	5	-0.015125
chr3	122384176	122412334	122398255	ENSG00000114023.15	+	protein_coding	KNOWN	FAM162A	3	6	0.161038
chr3	122412332	122416051	122414191	ENSG00000196981.3	-	protein_coding	KNOWN	WDR5B	1	1	-0.025502
chr3	122416207	122443180	122429693	ENSG00000272758.5	+	antisense	KNOWN	RP11-299J3.8	5	3	-0.005751
chr3	122416882	122417012	122416947	ENSG00000242531.1	-	unprocessed_pseudogene	KNOWN	RP11-299J3.6	1	1	-0.025502
chr3	122421949	122514945	122468447	ENSG00000114030.12	-	protein_coding	KNOWN	KPNA1	10	15	0.008231
chr3	122482990	122483229	122483109	ENSG00000275348.1	+	processed_pseudogene	KNOWN	RP11-592P9.3	1	1	-0.181385
chr3	122527924	122564577	122546250	ENSG00000138496.16	-	protein_coding	KNOWN	PARP9	7	11	0.030991
chr3	122564238	122575203	122569720	ENSG00000163840.9	+	protein_coding	KNOWN	DTX3L	2	5	0.122674
chr3	122577602	122639047	122608324	ENSG00000173200.12	+	protein_coding	KNOWN	PARP15	6	14	-0.118359
chr3	122660613	122662438	122661525	ENSG00000243918.1	+	processed_pseudogene	KNOWN	EIF4BP8	1	1	-0.138716
chr3	122680618	122730840	122705729	ENSG00000173193.13	+	protein_coding	KNOWN	PARP14	6	17	-0.009766
chr3	122740003	122793824	122766913	ENSG00000169087.10	-	protein_coding	KNOWN	HSPBAP1	6	8	-0.071992
chr3	122794795	122881139	122837967	ENSG00000138463.8	+	protein_coding	KNOWN	DIRC2	2	9	-0.190710
chr3	122886941	122892416	122889678	ENSG00000273033.2	+	lincRNA	KNOWN	RP11-67L2.2	1	1	-0.190517
chr3	122909193	123028605	122968899	ENSG00000082684.14	-	protein_coding	KNOWN	SEMA5B	11	23	0.265165
chr3	122926996	122927121	122927058	ENSG00000221211.1	-	miRNA	NOVEL	AC078794.1	1	1	0.068784
chr3	123067062	123225227	123146144	ENSG00000065485.17	+	protein_coding	KNOWN	PDIA5	8	17	0.222719
chr3	123161794	123161879	123161836	ENSG00000275891.1	+	miRNA	KNOWN	MIR7110	1	1	0.484693
chr3	123201927	123274130	123238028	ENSG00000121542.11	+	protein_coding	KNOWN	SEC22A	10	8	-0.048852
chr3	123277353	123277904	123277628	ENSG00000273454.1	+	lincRNA	KNOWN	RP11-797D24.3	1	1	0.075216
chr3	123282296	123449758	123366027	ENSG00000173175.14	-	protein_coding	KNOWN	ADCY5	10	23	0.366115
chr3	123283593	123283983	123283788	ENSG00000272678.1	+	antisense	KNOWN	RP11-797D24.4	1	1	0.075216
chr3	123490820	123585185	123538002	ENSG00000206527.9	-	protein_coding	KNOWN	HACD2	5	7	0.139387
chr3	123585542	123644568	123615055	ENSG00000239523.5	+	antisense	KNOWN	MYLK-AS1	3	4	0.166905
chr3	123610049	123884331	123747190	ENSG00000065534.18	-	protein_coding	KNOWN	MYLK	21	34	0.524820
chr3	123689644	123692407	123691025	ENSG00000250174.5	+	antisense	KNOWN	MYLK-AS2	2	3	0.954143
chr3	123715851	123716399	123716125	ENSG00000273123.1	+	antisense	KNOWN	RP11-9N20.3	1	1	0.655177
chr3	123814077	123814207	123814142	ENSG00000207002.1	+	snoRNA	NOVEL	SNORA5	1	1	0.648721
chr3	123897305	123961408	123929356	ENSG00000175455.14	-	protein_coding	KNOWN	CCDC14	22	13	-0.065583
chr3	123968521	123992178	123980349	ENSG00000065371.17	-	protein_coding	KNOWN	ROPN1	11	7	0.202458
chr3	124061994	124062084	124062039	ENSG00000238512.1	-	miRNA	NOVEL	AC117401.1	1	1	-0.169714
chr3	124080023	124726325	124403174	ENSG00000160145.15	+	protein_coding	KNOWN	KALRN	22	60	0.109121
chr3	124132929	124133025	124132977	ENSG00000266383.1	+	miRNA	KNOWN	MIR5002	1	1	0.369977
chr3	124151960	124153063	124152511	ENSG00000240622.1	-	processed_pseudogene	KNOWN	RPL7P15	1	2	0.038973
chr3	124374332	124374437	124374384	ENSG00000276656.1	+	miRNA	KNOWN	MIR6083	1	1	0.215374
chr3	124407691	124407783	124407737	ENSG00000252751.1	+	snRNA	KNOWN	RNU6-143P	1	1	-0.004224
chr3	124696938	124697036	124696987	ENSG00000263775.1	-	miRNA	NOVEL	AC080008.1	1	1	-0.021665
chr3	124723788	124726325	124725056	ENSG00000260391.2	+	sense_overlapping	KNOWN	RP11-71H17.7	1	1	0.060108
chr3	124730366	124749273	124739819	ENSG00000114491.13	+	protein_coding	KNOWN	UMPS	11	7	-0.174083
chr3	124732439	124732516	124732477	ENSG00000265981.1	+	miRNA	KNOWN	MIR544B	1	1	-0.174083
chr3	124733418	124733754	124733586	ENSG00000242199.1	-	processed_pseudogene	KNOWN	RP11-71H17.1	1	1	-0.174083
chr3	124761948	124901418	124831683	ENSG00000082781.11	-	protein_coding	KNOWN	ITGB5	13	15	0.515245
chr3	124781155	124787757	124784456	ENSG00000244286.1	+	antisense	KNOWN	ITGB5-AS1	1	2	0.747080
chr3	124791119	124793104	124792111	ENSG00000280042.1	-	TEC	KNOWN	RP11-71H17.8	1	1	0.574933
chr3	124792319	124792562	124792440	ENSG00000276626.1	-	misc_RNA	NOVEL	7SK	1	1	0.574933
chr3	124862094	124863317	124862705	ENSG00000243986.2	-	processed_pseudogene	KNOWN	ENO1P3	1	1	0.498151
chr3	124905442	124953819	124929630	ENSG00000173702.7	-	protein_coding	KNOWN	MUC13	5	12	0.203030
chr3	124965710	125055958	125010834	ENSG00000173706.12	-	protein_coding	KNOWN	HEG1	6	17	0.502166
chr3	125058304	125058438	125058371	ENSG00000252642.1	-	rRNA	KNOWN	RNA5SP137	1	1	0.609715
chr3	125082636	125212864	125147750	ENSG00000221955.10	-	protein_coding	KNOWN	SLC12A8	16	14	0.271847
chr3	125119097	125119200	125119148	ENSG00000199327.1	-	snRNA	KNOWN	RNU6-230P	1	1	0.267719
chr3	125151465	125151552	125151508	ENSG00000264986.1	-	miRNA	KNOWN	MIR5092	1	1	0.548630
chr3	125225561	125375354	125300457	ENSG00000163848.18	-	protein_coding	KNOWN	ZNF148	11	11	-0.021681
chr3	125310881	125311350	125311115	ENSG00000229048.5	+	processed_pseudogene	KNOWN	DUTP1	1	1	-0.050027
chr3	125344085	125344797	125344441	ENSG00000243508.1	-	processed_pseudogene	KNOWN	RP11-775J23.2	1	1	-0.303028
chr3	125388934	125388997	125388965	ENSG00000252953.1	+	snRNA	KNOWN	RNU6-232P	1	1	0.244843
chr3	125446644	125520197	125483420	ENSG00000114520.10	-	protein_coding	KNOWN	SNX4	5	14	0.137578
chr3	125516979	125517086	125517032	ENSG00000201800.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.184558
chr3	125528244	125528349	125528296	ENSG00000252965.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.184558
chr3	125528858	125595090	125561974	ENSG00000144909.7	-	protein_coding	KNOWN	OSBPL11	1	13	0.190932
chr3	125558838	125558960	125558899	ENSG00000281802.1	+	miRNA	NOVEL	AC016959.1	1	1	0.083168
chr3	125679573	125679781	125679677	ENSG00000243072.1	+	processed_pseudogene	KNOWN	GS1-388B5.2	1	1	-0.106422
chr3	125681305	125681453	125681379	ENSG00000242001.1	+	processed_pseudogene	KNOWN	GS1-388B5.1	1	1	-0.106422
chr3	125690256	125690343	125690299	ENSG00000266857.1	+	miRNA	NOVEL	AF186996.2	1	1	0.240090
chr3	125703349	125704312	125703830	ENSG00000234458.4	+	unprocessed_pseudogene	KNOWN	OR7E130P	1	1	0.240090
chr3	125712139	125713045	125712592	ENSG00000243429.1	+	unprocessed_pseudogene	KNOWN	OR7E29P	1	1	0.287779
chr3	125724539	125725445	125724992	ENSG00000228963.3	+	unprocessed_pseudogene	KNOWN	OR7E93P	1	1	0.287779
chr3	125734295	125735198	125734746	ENSG00000239978.1	+	unprocessed_pseudogene	KNOWN	OR7E53P	1	1	0.476472
chr3	125736216	125736303	125736259	ENSG00000265166.1	+	miRNA	NOVEL	AF186996.1	1	1	0.476472
chr3	125747084	125748098	125747591	ENSG00000179170.11	+	unprocessed_pseudogene	KNOWN	OR7E97P	1	1	0.476472
chr3	125756086	125756462	125756274	ENSG00000239432.1	+	processed_pseudogene	KNOWN	GS1-388B5.8	1	1	0.183734
chr3	125774714	125797953	125786333	ENSG00000272840.1	+	lincRNA	KNOWN	RP11-379B18.6	1	2	0.231326
chr3	125787888	125788146	125788017	ENSG00000239804.1	-	processed_pseudogene	KNOWN	RP11-379B18.1	1	1	0.228874
chr3	125790404	125790552	125790478	ENSG00000221737.1	-	miRNA	KNOWN	MIR548I1	1	1	0.236038
chr3	125795106	125795885	125795495	ENSG00000242229.1	+	processed_pseudogene	KNOWN	RPS3AP14	1	1	0.236038
chr3	125816082	125816286	125816184	ENSG00000241346.1	-	processed_pseudogene	KNOWN	SNRPCP11	1	1	0.137080
chr3	125827238	125916384	125871811	ENSG00000241288.7	-	processed_transcript	KNOWN	RP11-379B18.5	22	6	0.217652
chr3	125848223	125909372	125878797	ENSG00000241278.1	+	unprocessed_pseudogene	KNOWN	ENPP7P4	1	4	0.236794
chr3	125908005	125910272	125909138	ENSG00000248787.1	-	lincRNA	KNOWN	RP11-666A20.4	1	3	0.256484
chr3	125916620	125930024	125923322	ENSG00000171084.15	+	transcribed_unprocessed_pseudogene	KNOWN	FAM86JP	4	8	0.403510
chr3	125929275	125937039	125933157	ENSG00000189366.9	-	protein_coding	KNOWN	ALG1L	2	6	0.502707
chr3	125958556	125958817	125958686	ENSG00000241439.1	+	processed_pseudogene	KNOWN	RP11-666A20.3	1	1	0.118792
chr3	125969144	125983454	125976299	ENSG00000114547.9	+	protein_coding	KNOWN	ROPN1B	10	7	0.357763
chr3	126006355	126101561	126053958	ENSG00000114544.15	-	protein_coding	KNOWN	SLC41A3	23	13	0.347146
chr3	126056923	126058228	126057575	ENSG00000248607.1	+	antisense	KNOWN	RP11-158I23.1	1	2	0.179015
chr3	126069064	126069147	126069105	ENSG00000265911.1	+	miRNA	NOVEL	AC117422.1	1	1	0.179015
chr3	126084220	126095349	126089784	ENSG00000250012.1	+	antisense	KNOWN	RP11-124N2.1	2	3	0.391571
chr3	126103562	126197994	126150778	ENSG00000144908.13	-	protein_coding	KNOWN	ALDH1L1	18	23	0.485451
chr3	126103640	126108069	126105854	ENSG00000250218.1	+	antisense	KNOWN	ALDH1L1-AS1	1	4	0.410521
chr3	126160283	126160445	126160364	ENSG00000272020.1	-	snRNA	KNOWN	RNU1-30P	1	1	0.304536
chr3	126180065	126210169	126195117	ENSG00000246022.2	+	antisense	KNOWN	ALDH1L1-AS2	3	4	0.403081
chr3	126266796	126291279	126279037	ENSG00000250934.1	+	lincRNA	KNOWN	RP11-71E19.1	2	3	0.439654
chr3	126288867	126294024	126291445	ENSG00000251448.1	-	lincRNA	KNOWN	RP11-71E19.2	1	3	0.492418
chr3	126342635	126357442	126350038	ENSG00000163884.3	-	protein_coding	KNOWN	KLF15	2	3	0.416810
chr3	126393032	126394851	126393941	ENSG00000249833.5	-	antisense	KNOWN	CCDC37-AS1	3	3	0.780952
chr3	126394939	126436556	126415747	ENSG00000163885.11	+	protein_coding	KNOWN	CFAP100	8	17	0.665645
chr3	126432796	126434569	126433682	ENSG00000279328.1	-	TEC	KNOWN	RP11-203H19.2	1	1	0.282814
chr3	126437601	126475919	126456760	ENSG00000070476.14	-	protein_coding	KNOWN	ZXDC	4	10	0.344399
chr3	126481281	126517773	126499527	ENSG00000159650.8	-	protein_coding	KNOWN	UROC1	2	21	0.669284
chr3	126524283	126543291	126533787	ENSG00000180767.9	+	protein_coding	KNOWN	CHST13	2	4	0.674420
chr3	126526999	126558965	126542982	ENSG00000180697.8	-	protein_coding	KNOWN	C3orf22	2	6	0.638247
chr3	126564565	126564678	126564621	ENSG00000201968.1	-	rRNA	KNOWN	RNA5SP138	1	1	0.487055
chr3	126571779	126655155	126613467	ENSG00000197763.12	-	protein_coding	KNOWN	TXNRD3	5	16	0.181143
chr3	126571789	126572636	126572212	ENSG00000206483.5	-	protein_coding	KNOWN	TXNRD3NB	1	2	0.513572
chr3	126624792	126626061	126625426	ENSG00000248557.1	+	processed_pseudogene	KNOWN	RP11-390G14.1	1	2	0.022618
chr3	126660609	126671939	126666274	ENSG00000198284.9	+	transcribed_processed_pseudogene	KNOWN	NUP210P1	3	6	0.112771
chr3	126672106	126673223	126672664	ENSG00000248850.1	-	processed_pseudogene	KNOWN	RP11-605F14.2	1	1	0.323317
chr3	126704220	126960406	126832313	ENSG00000159685.10	+	protein_coding	KNOWN	CHCHD6	8	8	0.396919
chr3	126766434	126767475	126766954	ENSG00000249558.1	-	processed_pseudogene	KNOWN	RCC2P4	1	1	0.273742
chr3	126973065	126976426	126974745	ENSG00000280053.1	+	TEC	KNOWN	RP11-61K12.2	1	1	0.709744
chr3	126988594	127037392	127012993	ENSG00000114554.11	+	protein_coding	KNOWN	PLXNA1	4	31	1.115964
chr3	127193131	127198185	127195658	ENSG00000214324.5	+	lincRNA	KNOWN	C3orf56	1	2	0.283523
chr3	127202372	127202473	127202422	ENSG00000212556.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.283523
chr3	127221194	127221881	127221537	ENSG00000243016.1	-	unprocessed_pseudogene	KNOWN	RP11-305F5.2	1	1	0.314384
chr3	127240968	127241074	127241021	ENSG00000201288.1	-	snRNA	KNOWN	RNU6-1047P	1	1	0.433426
chr3	127284081	127284681	127284381	ENSG00000239620.1	-	processed_pseudogene	KNOWN	RP11-88I21.1	1	1	0.398199
chr3	127322307	127390670	127356488	ENSG00000244215.1	-	lincRNA	KNOWN	RP11-88I21.2	1	5	0.154445
chr3	127480690	127537780	127509235	ENSG00000239921.3	-	lincRNA	KNOWN	LINC01471	5	8	0.235232
chr3	127489553	127490787	127490170	ENSG00000240562.1	+	lincRNA	KNOWN	RP11-59J16.2	1	4	0.426176
chr3	127537937	127540485	127539211	ENSG00000282975.1	+	lincRNA	KNOWN	RP11-59J16.3	1	4	0.406100
chr3	127571232	127571838	127571535	ENSG00000282860.1	-	lincRNA	KNOWN	RP11-153F10.2	1	1	0.702580
chr3	127573069	127598251	127585660	ENSG00000163870.14	-	protein_coding	KNOWN	TPRA1	11	12	0.790965
chr3	127575266	127575331	127575298	ENSG00000275067.1	-	miRNA	KNOWN	MIR6825	1	1	0.702580
chr3	127587111	127587176	127587143	ENSG00000276083.1	-	miRNA	KNOWN	MIR7976	1	1	0.702580
chr3	127598223	127622436	127610329	ENSG00000073111.13	+	protein_coding	KNOWN	MCM2	9	16	0.678113
chr3	127629181	127672809	127650995	ENSG00000114631.10	+	protein_coding	KNOWN	PODXL2	1	8	0.437284
chr3	127664704	127664810	127664757	ENSG00000221413.1	+	miRNA	NOVEL	AC023593.1	1	1	0.587317
chr3	127672935	127680920	127676927	ENSG00000114626.17	+	protein_coding	KNOWN	ABTB1	15	12	0.869599
chr3	127689062	127823250	127756156	ENSG00000074416.13	-	protein_coding	KNOWN	MGLL	14	8	0.625007
chr3	127915232	127987671	127951451	ENSG00000187715.13	+	protein_coding	KNOWN	KBTBD12	7	6	0.051104
chr3	127963608	127963724	127963666	ENSG00000201210.1	+	rRNA	KNOWN	RNA5SP139	1	1	0.066901
chr3	128051641	128071683	128061662	ENSG00000058262.9	+	protein_coding	KNOWN	SEC61A1	7	12	0.528528
chr3	128064778	128153914	128109346	ENSG00000175792.11	-	protein_coding	KNOWN	RUVBL1	8	11	0.436156
chr3	128075073	128075249	128075161	ENSG00000222627.1	-	snRNA	KNOWN	RNU2-37P	1	1	0.524951
chr3	128075810	128079056	128077433	ENSG00000239608.1	+	antisense	KNOWN	RUVBL1-AS1	1	2	0.524951
chr3	128141875	128141977	128141926	ENSG00000212344.1	-	snRNA	KNOWN	RNU6-823P	1	1	0.349643
chr3	128153454	128408646	128281050	ENSG00000132394.10	+	protein_coding	KNOWN	EEFSEC	4	7	0.533222
chr3	128462439	128467248	128464843	ENSG00000179407.3	-	protein_coding	KNOWN	DNAJB8	2	3	0.483012
chr3	128463594	128472317	128467955	ENSG00000242049.1	+	antisense	KNOWN	DNAJB8-AS1	1	3	0.539354
chr3	128479427	128493185	128486306	ENSG00000179348.11	-	protein_coding	KNOWN	GATA2	6	7	0.822050
chr3	128489212	128502348	128495780	ENSG00000244300.2	+	antisense	KNOWN	GATA2-AS1	3	3	1.210651
chr3	128538020	128538631	128538325	ENSG00000239405.1	+	processed_pseudogene	KNOWN	TMED10P2	1	1	0.413920
chr3	128572000	128576086	128574043	ENSG00000198685.3	-	lincRNA	KNOWN	LINC01565	2	3	0.494286
chr3	128619970	128681075	128650522	ENSG00000163902.11	-	protein_coding	KNOWN	RPN1	8	10	0.538812
chr3	128673681	128674021	128673851	ENSG00000277250.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.389152
chr3	128673691	128673771	128673731	ENSG00000280957.1	-	miRNA	NOVEL	AC079945.1	1	1	0.389152
chr3	128674735	128677005	128675870	ENSG00000242551.2	-	unprocessed_pseudogene	KNOWN	POU5F1P6	1	3	0.389152
chr3	128714571	128714705	128714638	ENSG00000207130.1	-	snoRNA	NOVEL	SNORA24	1	1	0.371646
chr3	128726122	128814796	128770459	ENSG00000075785.12	+	protein_coding	KNOWN	RAB7A	8	6	0.498266
chr3	128748538	128749489	128749013	ENSG00000239503.1	-	processed_pseudogene	KNOWN	MARK2P8	1	1	0.500335
chr3	128764466	128765018	128764742	ENSG00000242992.3	-	processed_pseudogene	KNOWN	FTH1P4	1	1	0.553126
chr3	128785147	128785448	128785297	ENSG00000244232.3	+	misc_RNA	KNOWN	RN7SL698P	1	1	0.336614
chr3	128798841	128799201	128799021	ENSG00000239483.1	-	processed_pseudogene	KNOWN	RPS15AP16	1	1	0.629258
chr3	128843564	128844404	128843984	ENSG00000244065.1	-	processed_pseudogene	KNOWN	MARK2P17	1	1	0.512484
chr3	128848673	128849399	128849036	ENSG00000243022.1	-	processed_pseudogene	KNOWN	MARK3P3	1	1	0.512484
chr3	128852112	128853008	128852560	ENSG00000242062.1	-	processed_pseudogene	KNOWN	MARK2P6	1	1	0.847755
chr3	128859716	128860526	128860121	ENSG00000261159.1	-	lincRNA	KNOWN	RP11-723O4.9	1	1	0.847755
chr3	128861313	128871540	128866426	ENSG00000231305.3	-	antisense	KNOWN	RP11-723O4.2	2	5	0.814362
chr3	128869624	128870026	128869825	ENSG00000250796.1	+	processed_pseudogene	KNOWN	RP11-723O4.3	1	2	0.832870
chr3	128879596	128916067	128897831	ENSG00000177646.17	+	protein_coding	KNOWN	ACAD9	13	18	0.601297
chr3	128909866	129002690	128956278	ENSG00000114656.10	-	protein_coding	KNOWN	KIAA1257	5	8	0.434466
chr3	128909874	128971330	128940602	ENSG00000187695.6	-	protein_coding	KNOWN	RP11-723O4.6	2	8	0.398333
chr3	128914833	128915060	128914946	ENSG00000279507.1	-	TEC	KNOWN	RP11-723O4.7	1	1	0.641456
chr3	129001629	129040742	129021185	ENSG00000114654.7	+	protein_coding	KNOWN	EFCC1	2	8	0.783500
chr3	129045763	129046921	129046342	ENSG00000249505.1	+	processed_pseudogene	KNOWN	RP11-434H6.2	1	1	0.492079
chr3	129060767	129062406	129061586	ENSG00000169704.4	+	protein_coding	KNOWN	GP9	1	3	0.682172
chr3	129087569	129122801	129105185	ENSG00000172780.16	-	protein_coding	KNOWN	RAB43	8	4	0.668654
chr3	129087575	129161036	129124305	ENSG00000261796.1	-	protein_coding	KNOWN	ISY1-RAB43	1	13	0.742047
chr3	129123439	129124003	129123721	ENSG00000273174.1	+	antisense	KNOWN	RP11-434H6.6	1	1	0.725096
chr3	129127415	129161293	129144354	ENSG00000240682.9	-	protein_coding	KNOWN	ISY1	7	12	0.818707
chr3	129163606	129163940	129163773	ENSG00000273437.1	-	lincRNA	KNOWN	RP11-434H6.7	1	1	0.487221
chr3	129169484	129183922	129176703	ENSG00000169714.16	-	protein_coding	KNOWN	CNBP	10	5	0.576552
chr3	129218093	129218350	129218221	ENSG00000241673.1	-	processed_pseudogene	KNOWN	RPS27P12	1	1	0.560946
chr3	129249606	129277773	129263689	ENSG00000181789.14	+	protein_coding	KNOWN	COPG1	10	24	0.964281
chr3	129272146	129272243	129272194	ENSG00000278658.1	+	miRNA	KNOWN	MIR6826	1	1	0.981668
chr3	129278828	129306186	129292507	ENSG00000183624.13	+	protein_coding	KNOWN	HMCES	8	7	0.631941
chr3	129314771	129316277	129315524	ENSG00000184897.5	-	protein_coding	KNOWN	H1FX	1	1	0.592794
chr3	129315392	129326225	129320808	ENSG00000206417.8	+	antisense	KNOWN	H1FX-AS1	4	5	0.592794
chr3	129316261	129316391	129316326	ENSG00000280727.1	-	miRNA	NOVEL	AC137695.1	1	1	0.592794
chr3	129323046	129325426	129324236	ENSG00000248916.1	-	unprocessed_pseudogene	KNOWN	NUP210P3	1	3	0.592794
chr3	129334586	129335074	129334830	ENSG00000270492.1	+	processed_pseudogene	KNOWN	RP13-685P2.8	1	1	0.740519
chr3	129345411	129346164	129345787	ENSG00000270773.1	+	processed_pseudogene	KNOWN	RP13-685P2.7	1	1	0.740519
chr3	129381298	129394149	129387723	ENSG00000244932.2	+	unprocessed_pseudogene	KNOWN	RP11-529F4.1	1	5	0.652039
chr3	129382922	129399655	129391288	ENSG00000251474.6	-	transcribed_unprocessed_pseudogene	KNOWN	RPL32P3	8	5	0.628454
chr3	129397192	129397294	129397243	ENSG00000280589.1	-	miRNA	NOVEL	AL449212.1	1	1	0.589204
chr3	129397210	129397348	129397279	ENSG00000207088.1	-	snoRNA	KNOWN	SNORA7B	1	1	0.589204
chr3	129401321	129428651	129414986	ENSG00000172771.11	-	protein_coding	KNOWN	EFCAB12	5	9	0.605168
chr3	129430944	129440179	129435561	ENSG00000129071.9	-	protein_coding	KNOWN	MBD4	10	8	0.402094
chr3	129440036	129520507	129480271	ENSG00000163913.11	+	protein_coding	KNOWN	IFT122	32	31	0.529196
chr3	129528640	129535169	129531904	ENSG00000163914.4	+	protein_coding	KNOWN	RHO	1	5	0.663305
chr3	129543214	129551467	129547340	ENSG00000178804.7	+	protein_coding	KNOWN	H1FOO	2	5	0.703719
chr3	129555175	129606818	129580996	ENSG00000004399.12	-	protein_coding	KNOWN	PLXND1	17	36	0.984737
chr3	129591349	129591635	129591492	ENSG00000239437.3	+	misc_RNA	KNOWN	RN7SL752P	1	1	1.028566
chr3	129632019	129632492	129632255	ENSG00000248659.1	-	unprocessed_pseudogene	KNOWN	RP11-263I1.1	1	1	1.001346
chr3	129647792	129893576	129770684	ENSG00000172765.16	-	protein_coding	KNOWN	TMCC1	14	6	0.171470
chr3	129818932	129819033	129818982	ENSG00000202412.1	+	misc_RNA	KNOWN	RNY3P13	1	1	-0.119512
chr3	129847048	129847957	129847502	ENSG00000203644.3	-	sense_intronic	KNOWN	RP11-332M2.1	1	1	0.389828
chr3	129893871	129918575	129906223	ENSG00000271270.5	+	antisense	KNOWN	TMCC1-AS1	4	3	0.234488
chr3	129954105	129969294	129961699	ENSG00000250643.1	-	antisense	KNOWN	RP11-93K22.6	1	4	0.330779
chr3	129974305	129977938	129976121	ENSG00000170893.3	+	protein_coding	KNOWN	TRH	2	3	0.421299
chr3	129998531	129998936	129998733	ENSG00000248459.1	+	processed_pseudogene	KNOWN	RP11-93K22.1	1	1	0.334742
chr3	130013182	130013541	130013361	ENSG00000249869.1	-	processed_pseudogene	KNOWN	RP11-93K22.7	1	1	0.416719
chr3	130021553	130022520	130022036	ENSG00000180770.3	-	unprocessed_pseudogene	KNOWN	OR7E129P	1	1	0.416719
chr3	130033458	130033545	130033501	ENSG00000263767.1	-	miRNA	NOVEL	AC083906.1	1	1	0.421782
chr3	130034553	130035539	130035046	ENSG00000251178.1	-	unprocessed_pseudogene	KNOWN	OR7E21P	1	1	0.421782
chr3	130055724	130055920	130055822	ENSG00000251610.1	-	unprocessed_pseudogene	KNOWN	RP11-77P16.3	1	1	0.430794
chr3	130081831	130113227	130097529	ENSG00000251287.8	+	protein_coding	KNOWN	ALG1L2	3	8	0.442066
chr3	130089433	130094304	130091868	ENSG00000248243.1	-	lincRNA	KNOWN	RP11-93K22.13	1	4	0.511018
chr3	130096373	130096438	130096405	ENSG00000266849.1	+	miRNA	NOVEL	AC083906.2	1	1	0.555096
chr3	130099092	130111472	130105282	ENSG00000253540.5	-	transcribed_unprocessed_pseudogene	KNOWN	FAM86HP	5	8	0.538499
chr3	130112550	130120579	130116564	ENSG00000249846.6	+	lincRNA	KNOWN	RP11-77P16.4	3	3	0.415606
chr3	130167790	130168030	130167910	ENSG00000248618.1	-	processed_pseudogene	KNOWN	ENPP7P3	1	1	0.415606
chr3	130199708	130199918	130199813	ENSG00000250580.1	+	processed_pseudogene	KNOWN	SNRPCP8	1	1	0.123356
chr3	130212823	130273806	130243314	ENSG00000228252.8	+	unitary_pseudogene	KNOWN	COL6A4P2	6	25	-0.261399
chr3	130293337	130293760	130293548	ENSG00000249253.1	+	processed_pseudogene	KNOWN	RP11-77P16.1	1	1	-0.525211
chr3	130345516	130484844	130415180	ENSG00000172752.14	+	protein_coding	KNOWN	COL6A5	5	43	-0.387039
chr3	130369227	130369344	130369285	ENSG00000222683.1	-	miRNA	NOVEL	AC093004.1	1	1	-0.269345
chr3	130560334	130678155	130619244	ENSG00000206384.10	+	protein_coding	KNOWN	COL6A6	3	36	-0.365474
chr3	130678935	130746829	130712882	ENSG00000196455.7	-	protein_coding	KNOWN	PIK3R4	8	20	-0.327162
chr3	130811768	130812095	130811931	ENSG00000222783.1	-	misc_RNA	KNOWN	RN7SKP212	1	1	-0.274994
chr3	130827659	130828376	130828017	ENSG00000232829.3	+	processed_pseudogene	KNOWN	GSTO3P	1	1	-0.274994
chr3	130850595	131016712	130933653	ENSG00000017260.19	+	protein_coding	KNOWN	ATP2C1	24	28	-0.288048
chr3	130868872	130869246	130869059	ENSG00000280127.1	-	protein_coding	KNOWN	AC055733.1	1	1	-0.375134
chr3	130899414	130929976	130914695	ENSG00000250592.1	-	antisense	KNOWN	RP11-39E3.3	1	2	-0.290545
chr3	130914340	130914452	130914396	ENSG00000252894.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.136540
chr3	130918226	130919120	130918673	ENSG00000249098.1	-	processed_pseudogene	KNOWN	RP11-39E3.4	1	2	-0.136540
chr3	130927754	130928276	130928015	ENSG00000251579.1	-	processed_pseudogene	KNOWN	RP11-39E3.5	1	1	-0.136540
chr3	131013875	131027649	131020762	ENSG00000034533.11	-	protein_coding	KNOWN	ASTE1	8	7	-0.256673
chr3	131026850	131350465	131188657	ENSG00000114670.13	+	protein_coding	KNOWN	NEK11	17	18	-0.323202
chr3	131053317	131072339	131062828	ENSG00000250129.5	-	antisense	KNOWN	RP11-265F19.1	3	3	-0.332522
chr3	131092821	131092927	131092874	ENSG00000201550.1	-	snRNA	KNOWN	RNU6-726P	1	1	-0.301490
chr3	131111670	131111758	131111714	ENSG00000212073.1	-	miRNA	NOVEL	AC121332.1	1	1	-0.399861
chr3	131325092	131381475	131353283	ENSG00000250608.1	-	processed_transcript	KNOWN	RP11-933H2.4	4	4	-0.217803
chr3	131361898	131365122	131363510	ENSG00000246082.2	+	unitary_pseudogene	KNOWN	NUDT16P1	3	3	-0.290342
chr3	131381671	131388830	131385250	ENSG00000198585.11	+	protein_coding	KNOWN	NUDT16	3	4	-0.132975
chr3	131455126	131458598	131456862	ENSG00000261167.1	-	sense_overlapping	KNOWN	RP11-517B11.7	1	1	-0.380944
chr3	131462212	131502983	131482597	ENSG00000114686.8	-	protein_coding	KNOWN	MRPL3	10	11	-0.323085
chr3	131479097	131479233	131479165	ENSG00000249020.1	-	snoRNA	KNOWN	SNORA58	1	1	-0.462869
chr3	131517831	131520880	131519355	ENSG00000248468.1	+	antisense	KNOWN	RP11-517B11.4	1	2	-0.205844
chr3	131526447	131527179	131526813	ENSG00000248530.1	+	processed_pseudogene	KNOWN	BCL2L12P1	1	1	-0.205844
chr3	131533555	132285410	131909482	ENSG00000196353.11	-	protein_coding	KNOWN	CPNE4	14	20	-0.355362
chr3	131537571	131537685	131537628	ENSG00000251447.1	-	unprocessed_pseudogene	KNOWN	RP11-517B11.6	1	1	-0.311905
chr3	131985855	131985931	131985893	ENSG00000265859.1	-	miRNA	KNOWN	MIR5704	1	1	-0.383346
chr3	132175402	132176711	132176056	ENSG00000240854.1	+	processed_pseudogene	KNOWN	RP11-64K7.1	1	1	-0.142473
chr3	132243528	132244265	132243896	ENSG00000242899.1	-	processed_pseudogene	KNOWN	RPL7P16	1	1	-0.309822
chr3	132317367	132368298	132342832	ENSG00000014257.15	+	protein_coding	KNOWN	ACPP	9	11	-0.096288
chr3	132386522	132389074	132387798	ENSG00000240890.2	+	processed_pseudogene	KNOWN	RP11-65E22.2	1	2	-0.091315
chr3	132401253	132401796	132401524	ENSG00000213264.3	+	processed_pseudogene	KNOWN	NIP7P2	1	1	-0.067486
chr3	132417526	132539032	132478279	ENSG00000138246.15	+	protein_coding	KNOWN	DNAJC13	8	56	-0.074131
chr3	132558138	132660723	132609430	ENSG00000240303.7	-	protein_coding	KNOWN	ACAD11	10	20	0.141391
chr3	132558142	132722459	132640300	ENSG00000274810.3	-	protein_coding	KNOWN	NPHP3-ACAD11	3	45	0.048465
chr3	132597237	132618967	132608102	ENSG00000129048.6	+	protein_coding	KNOWN	ACKR4	2	3	0.122132
chr3	132645831	132650383	132648107	ENSG00000251614.1	+	processed_pseudogene	KNOWN	HSPA8P19	1	5	0.137931
chr3	132654446	132678097	132666271	ENSG00000081307.12	+	protein_coding	KNOWN	UBA5	14	12	0.122785
chr3	132680609	132722442	132701525	ENSG00000113971.18	-	protein_coding	KNOWN	NPHP3	10	27	-0.179609
chr3	132721750	132874223	132797986	ENSG00000248724.6	+	antisense	KNOWN	NPHP3-AS1	2	11	-0.312396
chr3	133015004	133037052	133026028	ENSG00000249725.1	-	lincRNA	KNOWN	RP11-469L4.1	1	2	-0.151332
chr3	133038391	133397792	133218091	ENSG00000144868.13	+	protein_coding	KNOWN	TMEM108	11	6	-0.324136
chr3	133246106	133257188	133251647	ENSG00000251011.5	-	antisense	KNOWN	TMEM108-AS1	2	4	-0.352198
chr3	133399995	133475222	133437608	ENSG00000170819.4	+	protein_coding	KNOWN	BFSP2	6	7	0.281806
chr3	133409955	133410843	133410399	ENSG00000249820.1	+	processed_pseudogene	KNOWN	RP11-503I22.2	1	1	0.453349
chr3	133429269	133455776	133442522	ENSG00000249993.1	-	antisense	KNOWN	BFSP2-AS1	1	5	0.243441
chr3	133490824	133491505	133491164	ENSG00000214301.4	+	processed_pseudogene	KNOWN	RP11-91K8.4	1	1	0.258002
chr3	133543064	133543466	133543265	ENSG00000272832.1	-	lincRNA	KNOWN	RP11-91K8.5	1	1	0.373174
chr3	133546071	133546272	133546171	ENSG00000250983.1	-	processed_pseudogene	KNOWN	RP11-91K8.2	1	1	0.373174
chr3	133551186	133551315	133551250	ENSG00000201827.1	+	snoRNA	NOVEL	SNORA33	1	1	0.028177
chr3	133573730	133590261	133581995	ENSG00000091527.15	+	protein_coding	KNOWN	CDV3	9	5	0.049085
chr3	133598175	133661893	133630034	ENSG00000163781.12	-	protein_coding	KNOWN	TOPBP1	10	28	-0.126170
chr3	133661998	133754576	133708287	ENSG00000242337.5	+	transcribed_unprocessed_pseudogene	KNOWN	TFP1	4	10	-0.156047
chr3	133664926	133665034	133664980	ENSG00000252641.2	+	snRNA	KNOWN	RNU6-678P	1	1	-0.194531
chr3	133710076	133710167	133710121	ENSG00000201394.1	-	rRNA	KNOWN	RNA5SP140	1	1	-0.003933
chr3	133745956	133779006	133762481	ENSG00000091513.14	+	protein_coding	KNOWN	TF	14	17	-0.005768
chr3	133760300	133762363	133761331	ENSG00000244062.1	+	processed_pseudogene	KNOWN	RP11-404G16.2	1	2	0.174849
chr3	133784033	133825772	133804902	ENSG00000144867.11	+	protein_coding	KNOWN	SRPRB	5	8	-0.200079
chr3	133824239	133895836	133860037	ENSG00000154917.10	-	protein_coding	KNOWN	RAB6B	7	9	0.212649
chr3	133928145	133929812	133928978	ENSG00000221972.3	-	protein_coding	KNOWN	C3orf36	1	1	-0.303550
chr3	133932696	134052184	133992440	ENSG00000174640.12	-	protein_coding	KNOWN	SLCO2A1	8	14	0.355388
chr3	134055256	134057648	134056452	ENSG00000243832.1	-	lincRNA	KNOWN	RP11-202A13.1	1	2	0.261917
chr3	134065303	134250744	134158023	ENSG00000163785.12	-	protein_coding	KNOWN	RYK	9	15	0.189079
chr3	134170487	134171085	134170786	ENSG00000231845.3	+	processed_pseudogene	KNOWN	HMGB3P14	1	1	0.091992
chr3	134261776	134261911	134261843	ENSG00000281921.1	+	miRNA	NOVEL	AC096967.1	1	1	0.038880
chr3	134313576	134321171	134317373	ENSG00000240006.1	+	lincRNA	KNOWN	RP11-200A1.1	1	2	0.510705
chr3	134347288	134349233	134348260	ENSG00000260633.1	-	lincRNA	KNOWN	RP11-375I20.6	1	1	0.789848
chr3	134351852	134356561	134354206	ENSG00000214289.2	-	transcribed_processed_pseudogene	KNOWN	RPL39P5	2	2	0.763187
chr3	134355874	134375479	134365676	ENSG00000114019.14	-	protein_coding	KNOWN	AMOTL2	13	10	0.842438
chr3	134367804	134367862	134367833	ENSG00000277723.1	-	miRNA	KNOWN	MIR6827	1	1	0.763187
chr3	134385197	134385494	134385345	ENSG00000248377.1	+	processed_pseudogene	KNOWN	HMGN1P9	1	1	1.046711
chr3	134410044	134410140	134410092	ENSG00000221313.2	-	miRNA	NOVEL	AC010207.1	1	1	0.115075
chr3	134437605	134438211	134437908	ENSG00000214288.4	+	processed_pseudogene	KNOWN	HMGB3P13	1	1	0.347453
chr3	134437827	134437906	134437866	ENSG00000263554.1	+	miRNA	KNOWN	MIR4788	1	1	0.347453
chr3	134477706	134486716	134482211	ENSG00000129055.12	-	protein_coding	KNOWN	ANAPC13	6	3	0.634250
chr3	134485743	134575017	134530380	ENSG00000182923.16	+	protein_coding	KNOWN	CEP63	16	16	0.110293
chr3	134510531	134511413	134510972	ENSG00000249691.1	-	processed_pseudogene	KNOWN	RP11-445J14.1	1	1	-0.137209
chr3	134597801	135260467	134929134	ENSG00000154928.16	+	protein_coding	KNOWN	EPHB1	12	16	0.014708
chr3	134603138	134651636	134627387	ENSG00000174611.11	-	protein_coding	KNOWN	KY	5	14	-0.017274
chr3	134780527	134780627	134780577	ENSG00000253087.1	-	snRNA	KNOWN	RNU6-1174P	1	1	-0.108307
chr3	134783436	134783555	134783495	ENSG00000201413.1	-	rRNA	KNOWN	RNA5SP141	1	1	-0.108307
chr3	135356067	135439888	135397977	ENSG00000240086.5	-	processed_transcript	KNOWN	RP11-657O9.1	3	4	-0.162269
chr3	135925891	135926167	135926029	ENSG00000242222.1	+	processed_pseudogene	KNOWN	RP11-237P21.1	1	1	0.219371
chr3	135959275	135959590	135959432	ENSG00000241905.1	-	processed_pseudogene	KNOWN	RP11-305O4.1	1	1	-0.038856
chr3	135965673	136147891	136056782	ENSG00000073711.10	+	protein_coding	KNOWN	PPP2R3A	5	14	-0.134651
chr3	136055184	136055764	136055474	ENSG00000227267.3	+	processed_pseudogene	KNOWN	RP11-305O4.2	1	1	-0.136709
chr3	136087475	136087913	136087694	ENSG00000273455.1	-	antisense	KNOWN	RP11-305O4.3	1	1	-0.158816
chr3	136148922	136197241	136173081	ENSG00000174579.3	-	protein_coding	KNOWN	MSL2	5	2	0.027858
chr3	136155549	136155996	136155772	ENSG00000241438.1	+	processed_pseudogene	KNOWN	TDGF1P6	1	1	-0.069289
chr3	136205540	136205915	136205727	ENSG00000244740.1	-	processed_pseudogene	KNOWN	RP11-463H24.1	1	1	0.358067
chr3	136250306	136337896	136294101	ENSG00000114054.13	+	protein_coding	KNOWN	PCCB	19	16	0.032670
chr3	136336233	136752403	136544318	ENSG00000118007.12	-	protein_coding	KNOWN	STAG1	10	36	-0.026626
chr3	136430084	136430183	136430133	ENSG00000200571.1	-	snRNA	KNOWN	RNU6-1284P	1	1	-0.363460
chr3	136588209	136588311	136588260	ENSG00000280829.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.271820
chr3	136609050	136609602	136609326	ENSG00000244101.1	+	processed_pseudogene	KNOWN	HMGN1P10	1	1	-0.181385
chr3	136721394	136721495	136721444	ENSG00000252914.1	-	snRNA	KNOWN	RNU6-789P	1	1	0.136939
chr3	136736500	136737229	136736864	ENSG00000240695.1	-	processed_pseudogene	KNOWN	RP11-102M11.1	1	1	0.413920
chr3	136752630	136755780	136754205	ENSG00000261758.1	+	antisense	KNOWN	RP11-102M11.2	1	1	-0.006923
chr3	136808551	136809623	136809087	ENSG00000242968.1	-	processed_pseudogene	KNOWN	RP11-731C17.1	1	2	0.156122
chr3	136818647	136855892	136837269	ENSG00000168917.8	+	protein_coding	KNOWN	SLC35G2	3	2	0.117319
chr3	136837338	136839021	136838179	ENSG00000273486.1	-	antisense	KNOWN	RP11-731C17.2	1	1	0.140627
chr3	136841726	136862054	136851890	ENSG00000239213.5	-	antisense	KNOWN	NCK1-AS1	3	4	0.091292
chr3	136862208	136949823	136906015	ENSG00000158092.6	+	protein_coding	KNOWN	NCK1	12	4	-0.018283
chr3	136899076	136900076	136899576	ENSG00000214283.4	-	processed_pseudogene	KNOWN	RAD51AP1P1	1	1	0.177383
chr3	136946230	137011085	136978657	ENSG00000174564.12	+	protein_coding	KNOWN	IL20RB	5	7	0.058394
chr3	136959125	136982196	136970660	ENSG00000249407.1	-	antisense	KNOWN	IL20RB-AS1	1	2	-0.096520
chr3	137518134	137518255	137518194	ENSG00000201325.1	-	rRNA	KNOWN	RNA5SP142	1	1	-0.769811
chr3	137535572	137536142	137535857	ENSG00000243886.1	-	processed_pseudogene	KNOWN	RP11-575C1.1	1	1	-0.540276
chr3	137723774	137724543	137724158	ENSG00000242070.1	+	processed_pseudogene	KNOWN	NPM1P17	1	2	-0.696504
chr3	137764284	137766338	137765311	ENSG00000168875.2	+	protein_coding	KNOWN	SOX14	1	1	-0.336542
chr3	137771949	137780878	137776413	ENSG00000239513.5	+	lincRNA	KNOWN	LINC01210	4	5	0.000844
chr3	137791973	137796678	137794325	ENSG00000261146.1	+	lincRNA	KNOWN	RP11-2A4.4	1	1	-0.728302
chr3	137880295	137882237	137881266	ENSG00000241478.1	+	processed_pseudogene	KNOWN	HSPA8P9	1	1	-0.048669
chr3	137998735	138033655	138016195	ENSG00000066405.12	+	protein_coding	KNOWN	CLDN18	3	5	-0.150889
chr3	138004649	138005122	138004885	ENSG00000272609.1	-	antisense	KNOWN	RP11-461M2.2	1	1	-0.268303
chr3	138061990	138115818	138088904	ENSG00000158163.14	-	protein_coding	KNOWN	DZIP1L	9	16	0.182007
chr3	138101478	138102917	138102197	ENSG00000240668.1	-	processed_pseudogene	KNOWN	KRT8P36	1	1	0.242409
chr3	138102085	138102222	138102153	ENSG00000281378.1	+	miRNA	NOVEL	AC023049.1	1	1	0.242409
chr3	138123718	138132387	138128052	ENSG00000118017.3	-	protein_coding	KNOWN	A4GNT	1	3	0.201571
chr3	138161012	138174949	138167980	ENSG00000138231.12	-	protein_coding	KNOWN	DBR1	4	8	0.062950
chr3	138187248	138298389	138242818	ENSG00000114098.17	+	protein_coding	KNOWN	ARMC8	23	23	0.022650
chr3	138261437	138329886	138295661	ENSG00000181322.13	-	protein_coding	KNOWN	NME9	10	12	0.025933
chr3	138347648	138405534	138376591	ENSG00000158186.12	+	protein_coding	KNOWN	MRAS	11	6	0.448035
chr3	138434586	138481686	138458136	ENSG00000158220.13	+	protein_coding	KNOWN	ESYT3	7	23	0.272120
chr3	138482065	138485755	138483910	ENSG00000280399.1	+	TEC	KNOWN	RP11-80P20.3	1	1	0.422332
chr3	138494344	138594538	138544441	ENSG00000114107.8	-	protein_coding	KNOWN	CEP70	13	18	-0.092752
chr3	138608606	138633376	138620991	ENSG00000158234.12	+	protein_coding	KNOWN	FAIM	9	6	-0.113528
chr3	138643874	138644694	138644284	ENSG00000174715.7	-	processed_pseudogene	KNOWN	RP11-79L9.2	1	2	-0.166610
chr3	138652699	138834938	138743818	ENSG00000051382.8	-	protein_coding	KNOWN	PIK3CB	14	23	-0.049000
chr3	138777832	138778810	138778321	ENSG00000239207.2	+	processed_pseudogene	KNOWN	GAPDHP39	1	1	0.326457
chr3	138796851	138797240	138797045	ENSG00000242321.1	+	processed_pseudogene	KNOWN	RPL23AP40	1	1	-0.221899
chr3	138825063	138826329	138825696	ENSG00000241429.1	+	processed_pseudogene	KNOWN	EEF1A1P25	1	1	0.161533
chr3	138889255	138889957	138889606	ENSG00000242244.1	-	processed_pseudogene	KNOWN	ATP5G1P3	1	2	0.214476
chr3	138935189	138944020	138939604	ENSG00000244578.1	-	lincRNA	KNOWN	LINC01391	3	3	0.738355
chr3	138944224	138947140	138945682	ENSG00000183770.5	-	protein_coding	KNOWN	FOXL2	1	1	0.738355
chr3	138947234	138953451	138950342	ENSG00000206262.8	+	protein_coding	KNOWN	FOXL2NB	3	3	0.483406
chr3	139005468	139006268	139005868	ENSG00000206260.3	-	protein_coding	KNOWN	PRR23A	1	1	-0.153661
chr3	139005806	139357223	139181514	ENSG00000175110.11	+	protein_coding	KNOWN	MRPS22	14	10	-0.081078
chr3	139019031	139020926	139019978	ENSG00000184814.5	-	protein_coding	KNOWN	PRR23B	1	1	-0.572141
chr3	139042102	139044892	139043497	ENSG00000233701.3	-	protein_coding	KNOWN	PRR23C	1	1	-0.075608
chr3	139081654	139082377	139082015	ENSG00000251137.1	-	processed_pseudogene	KNOWN	RPL7L1P7	1	1	-0.727927
chr3	139104185	139125171	139114678	ENSG00000232416.3	+	lincRNA	KNOWN	BPESC1	1	3	0.092544
chr3	139232992	139233522	139233257	ENSG00000281473.1	+	lincRNA	KNOWN	PISRT1	1	1	0.020831
chr3	139233414	139233520	139233467	ENSG00000276304.1	+	misc_RNA	NOVEL	PISRT1	1	1	0.020831
chr3	139349024	139349371	139349197	ENSG00000272656.1	-	antisense	KNOWN	RP11-219D15.3	1	1	0.015123
chr3	139355600	139389732	139372666	ENSG00000184432.9	-	protein_coding	KNOWN	COPB2	13	22	0.107311
chr3	139389815	139583319	139486567	ENSG00000248932.5	+	antisense	KNOWN	RP11-319G6.1	7	5	-0.102986
chr3	139452884	139480747	139466815	ENSG00000114113.6	-	protein_coding	KNOWN	RBP2	3	5	0.069753
chr3	139466430	139466795	139466612	ENSG00000248790.1	+	antisense	KNOWN	RP11-319G6.3	1	2	0.335106
chr3	139493809	139494937	139494373	ENSG00000178631.7	+	processed_pseudogene	KNOWN	ACTG1P1	1	1	-0.430961
chr3	139494618	139494701	139494659	ENSG00000263538.1	+	miRNA	NOVEL	AC097103.1	1	1	-0.430961
chr3	139517434	139539829	139528631	ENSG00000114115.9	-	protein_coding	KNOWN	RBP1	7	4	-0.086544
chr3	139560180	139678017	139619098	ENSG00000163864.14	-	protein_coding	KNOWN	NMNAT3	15	7	-0.348088
chr3	139582928	139583593	139583260	ENSG00000214280.3	-	processed_pseudogene	KNOWN	RP11-553K23.2	1	1	-0.303937
chr3	139584105	139584445	139584275	ENSG00000201600.1	-	misc_RNA	KNOWN	RN7SKP124	1	1	-0.303937
chr3	139609669	139609939	139609804	ENSG00000244692.3	-	misc_RNA	KNOWN	RN7SL724P	1	1	-0.438523
chr3	139678620	139682564	139680592	ENSG00000261763.1	-	lincRNA	KNOWN	RP11-442N1.2	1	1	-0.092791
chr3	139688403	139689342	139688872	ENSG00000250543.1	-	lincRNA	KNOWN	RP11-442N1.1	1	2	-0.092791
chr3	139837220	139859894	139848557	ENSG00000251471.1	+	lincRNA	KNOWN	RP11-166D18.1	1	3	-0.347248
chr3	139845078	139845411	139845244	ENSG00000250161.1	-	processed_pseudogene	KNOWN	TRMT112P5	1	1	-0.377493
chr3	139935185	140577397	140256291	ENSG00000158258.15	+	protein_coding	KNOWN	CLSTN2	3	17	-0.268655
chr3	140449435	140460351	140454893	ENSG00000249290.5	-	antisense	KNOWN	RP11-68L1.2	3	6	-0.318342
chr3	140461000	140462825	140461912	ENSG00000251058.1	-	antisense	KNOWN	RP11-68L1.1	1	2	-0.327722
chr3	140490052	140490144	140490098	ENSG00000216184.1	-	miRNA	NOVEL	AC048346.1	1	1	-0.127453
chr3	140505611	140508789	140507200	ENSG00000250433.1	-	antisense	KNOWN	CLSTN2-AS1	1	2	-0.127453
chr3	140619694	140619837	140619765	ENSG00000249305.1	-	processed_pseudogene	KNOWN	RP11-13L2.1	1	1	-0.357619
chr3	140678039	140701150	140689594	ENSG00000155890.3	+	protein_coding	KNOWN	TRIM42	1	5	-0.449158
chr3	140865075	140867783	140866429	ENSG00000261826.1	-	lincRNA	KNOWN	RP11-691G17.1	1	1	-0.549278
chr3	140902194	140902651	140902422	ENSG00000224085.3	+	processed_pseudogene	KNOWN	RPL23AP41	1	1	-0.025048
chr3	140941830	140979933	140960881	ENSG00000114120.11	+	protein_coding	KNOWN	SLC25A36	15	8	-0.226693
chr3	140972744	140973255	140972999	ENSG00000248773.1	+	sense_intronic	KNOWN	RP11-231L11.3	1	2	-0.268890
chr3	141051402	141148611	141100006	ENSG00000175093.4	+	protein_coding	KNOWN	SPSB4	4	3	-0.062200
chr3	141115124	141124182	141119653	ENSG00000251270.1	-	antisense	KNOWN	RP11-231L11.1	1	3	-0.219469
chr3	141228726	141294906	141261816	ENSG00000155893.11	+	protein_coding	KNOWN	PXYLP1	14	8	0.098761
chr3	141258418	141258779	141258598	ENSG00000241400.1	+	processed_pseudogene	KNOWN	RP11-764I5.1	1	1	0.340379
chr3	141267353	141367137	141317245	ENSG00000249417.1	-	antisense	KNOWN	RP11-438D8.2	1	3	0.092369
chr3	141307612	141307933	141307772	ENSG00000249540.1	-	processed_pseudogene	KNOWN	RP11-789L4.1	1	1	-0.038207
chr3	141324213	141449792	141387002	ENSG00000177311.10	+	protein_coding	KNOWN	ZBTB38	20	8	0.176903
chr3	141470634	141471902	141471268	ENSG00000215606.4	-	processed_pseudogene	KNOWN	KRT18P35	1	1	-0.019654
chr3	141487047	141615342	141551194	ENSG00000155903.11	+	protein_coding	KNOWN	RASA2	7	25	-0.218632
chr3	141487181	141487424	141487302	ENSG00000280530.1	-	protein_coding	KNOWN	AC010184.1	1	2	-0.019654
chr3	141525133	141526121	141525627	ENSG00000250170.1	+	sense_intronic	KNOWN	RASA2-IT1	1	2	-0.352310
chr3	141600276	141600579	141600427	ENSG00000249986.1	-	processed_pseudogene	KNOWN	YWHAQP6	1	1	-0.050027
chr3	141663199	141721073	141692136	ENSG00000242104.3	+	lincRNA	KNOWN	RP11-340E6.1	1	8	0.151944
chr3	141709016	141709832	141709424	ENSG00000241899.1	-	processed_pseudogene	KNOWN	TPT1P3	1	2	0.204886
chr3	141724425	141724526	141724475	ENSG00000241526.1	+	processed_pseudogene	KNOWN	RP11-144C9.1	1	1	0.410263
chr3	141738204	141747560	141742882	ENSG00000114125.13	+	protein_coding	KNOWN	RNF7	7	4	-0.151737
chr3	141778148	141818490	141798319	ENSG00000114124.2	+	protein_coding	KNOWN	GRK7	1	4	0.175366
chr3	141787911	141788009	141787960	ENSG00000265391.1	+	miRNA	NOVEL	AC112504.1	1	1	0.198907
chr3	141865012	141865279	141865145	ENSG00000228398.3	-	processed_pseudogene	KNOWN	HMGN2P25	1	1	0.293199
chr3	141876124	141926514	141901319	ENSG00000069849.10	+	protein_coding	KNOWN	ATP1B3	10	9	0.064066
chr3	141902924	141903030	141902977	ENSG00000200389.1	-	snRNA	KNOWN	RNU6-509P	1	1	0.282214
chr3	141918252	141919021	141918636	ENSG00000244124.1	-	antisense	KNOWN	ATP1B3-AS1	1	2	-0.194889
chr3	141936707	141938547	141937627	ENSG00000279147.1	-	TEC	KNOWN	RP11-271K21.12	1	1	0.075216
chr3	141944428	142149544	142046986	ENSG00000114126.17	-	protein_coding	KNOWN	TFDP2	24	14	-0.053173
chr3	142043623	142044198	142043910	ENSG00000233597.3	-	processed_pseudogene	KNOWN	RP11-343B5.1	1	1	-0.031997
chr3	142145454	142145555	142145504	ENSG00000206604.1	+	snRNA	KNOWN	RNU6-425P	1	1	-0.268052
chr3	142157527	142225607	142191567	ENSG00000175066.15	-	protein_coding	KNOWN	GK5	12	18	-0.094637
chr3	142306607	142448062	142377334	ENSG00000114127.10	-	protein_coding	KNOWN	XRN1	14	42	-0.090827
chr3	142407657	142407737	142407697	ENSG00000251804.1	-	snRNA	KNOWN	RNU6-1294P	1	1	-0.100653
chr3	142420205	142420369	142420287	ENSG00000202125.1	-	snRNA	KNOWN	RNU1-100P	1	1	-0.008172
chr3	142449235	142578826	142514030	ENSG00000175054.14	-	protein_coding	KNOWN	ATR	10	47	-0.089749
chr3	142450102	142452149	142451125	ENSG00000242479.1	+	processed_pseudogene	KNOWN	RP11-383G6.4	1	1	-0.067585
chr3	142465315	142472337	142468826	ENSG00000244327.1	-	sense_overlapping	KNOWN	RP11-383G6.3	1	2	-0.028708
chr3	142580910	142582399	142581654	ENSG00000242390.1	+	processed_pseudogene	KNOWN	RPL6P9	1	3	0.100307
chr3	142591677	142591791	142591734	ENSG00000252745.1	-	rRNA	KNOWN	RNA5SP143	1	1	-0.006310
chr3	142596387	142713664	142655025	ENSG00000120756.12	+	protein_coding	KNOWN	PLS1	12	16	-0.386385
chr3	142654784	142656745	142655764	ENSG00000239641.1	-	antisense	KNOWN	PLS1-AS1	1	2	-0.500350
chr3	142673597	142673904	142673750	ENSG00000199319.1	+	misc_RNA	KNOWN	RN7SKP25	1	1	-0.274136
chr3	142724074	142807888	142765981	ENSG00000144935.14	+	protein_coding	KNOWN	TRPC1	5	13	-0.469198
chr3	142801207	142801268	142801237	ENSG00000251787.1	+	snRNA	KNOWN	RNU7-47P	1	1	-0.552913
chr3	142815922	142889203	142852562	ENSG00000163710.7	-	protein_coding	KNOWN	PCOLCE2	10	9	-0.421209
chr3	142827096	142827728	142827412	ENSG00000240950.1	-	processed_pseudogene	KNOWN	RP11-372E1.1	1	1	-0.578849
chr3	142926675	142942534	142934604	ENSG00000243818.4	+	antisense	KNOWN	RP11-372E1.4	2	5	-0.486927
chr3	142949164	142963682	142956423	ENSG00000188582.8	-	protein_coding	KNOWN	PAQR9	3	3	-0.293855
chr3	142960372	142960543	142960457	ENSG00000241592.1	+	processed_pseudogene	KNOWN	RP11-372E1.7	1	1	-0.273141
chr3	142960650	143001559	142981104	ENSG00000241570.8	+	antisense	KNOWN	PAQR9-AS1	15	5	-0.280503
chr3	142964497	143060546	143012521	ENSG00000163714.17	+	protein_coding	KNOWN	U2SURP	17	29	-0.257230
chr3	143000907	143001467	143001187	ENSG00000268129.1	-	lincRNA	KNOWN	RP11-91G21.1	1	1	-0.208668
chr3	143111802	143112359	143112080	ENSG00000243733.1	+	lincRNA	KNOWN	RP11-80H8.3	1	2	-0.157368
chr3	143119331	143124014	143121672	ENSG00000175040.5	+	protein_coding	KNOWN	CHST2	1	2	-0.157368
chr3	143123362	143131893	143127627	ENSG00000241679.2	+	processed_transcript	KNOWN	RP11-80H8.4	2	2	-0.127941
chr3	143165648	143165737	143165692	ENSG00000211483.2	+	miRNA	NOVEL	AC018450.1	1	1	-0.092040
chr3	143176327	143177617	143176972	ENSG00000244171.4	+	processed_pseudogene	KNOWN	PBX2P1	1	1	-0.120815
chr3	143265222	143848531	143556876	ENSG00000181804.14	-	protein_coding	KNOWN	SLC9A9	5	16	-0.389016
chr3	143313067	143314429	143313748	ENSG00000240888.1	-	sense_intronic	KNOWN	RP13-635I23.3	1	2	-0.067207
chr3	143342246	143347071	143344658	ENSG00000240012.1	+	antisense	KNOWN	SLC9A9-AS1	1	4	-0.211077
chr3	143381338	143382161	143381749	ENSG00000244493.1	+	antisense	KNOWN	SLC9A9-AS2	1	2	-0.434077
chr3	143503275	143504273	143503774	ENSG00000243033.2	-	processed_pseudogene	KNOWN	GAPDHP47	1	1	-0.573589
chr3	143517123	143518229	143517676	ENSG00000243759.1	-	processed_pseudogene	KNOWN	ST13P15	1	1	-0.574452
chr3	143620528	143627690	143624109	ENSG00000248374.1	+	unprocessed_pseudogene	KNOWN	RP11-501M7.1	1	3	-0.320331
chr3	143855739	143856142	143855940	ENSG00000235110.5	-	processed_pseudogene	KNOWN	RP11-8J23.1	1	1	-0.379314
chr3	143971798	144048719	144010258	ENSG00000181744.8	+	protein_coding	KNOWN	C3orf58	7	3	-0.589099
chr3	144186905	144187020	144186962	ENSG00000222778.1	-	rRNA	KNOWN	RNA5SP144	1	1	-0.271892
chr3	144442211	144445844	144444027	ENSG00000280397.1	-	TEC	KNOWN	RP11-42F12.1	1	1	-0.670969
chr3	145523538	145524415	145523976	ENSG00000244024.1	+	processed_pseudogene	KNOWN	LARP7P4	1	1	-0.702148
chr3	145684572	145685092	145684832	ENSG00000241695.1	+	processed_pseudogene	KNOWN	GM2AP1	1	1	-0.622851
chr3	145824257	145824739	145824498	ENSG00000239797.1	-	processed_pseudogene	KNOWN	RPL21P39	1	1	-0.926387
chr3	145897286	145897374	145897330	ENSG00000273810.1	+	miRNA	NOVEL	AC055758.1	1	1	-0.703188
chr3	145939912	145961536	145950724	ENSG00000244358.1	+	lincRNA	KNOWN	RP11-88H10.2	2	4	-0.537294
chr3	145961755	145963623	145962689	ENSG00000240095.1	+	lincRNA	KNOWN	RP11-88H10.3	1	2	-0.520985
chr3	146059585	146061679	146060632	ENSG00000261051.1	-	sense_overlapping	KNOWN	RP11-274H2.5	1	1	-0.258505
chr3	146064042	146105204	146084623	ENSG00000243415.2	+	antisense	KNOWN	RP11-274H2.2	3	4	-0.336886
chr3	146066344	146069185	146067764	ENSG00000240032.1	-	antisense	KNOWN	RP11-274H2.3	1	2	-0.258505
chr3	146069440	146163653	146116546	ENSG00000152952.11	-	protein_coding	KNOWN	PLOD2	10	20	-0.281586
chr3	146192339	146251179	146221759	ENSG00000114698.14	-	protein_coding	KNOWN	PLSCR4	11	11	-0.371047
chr3	146342996	146348480	146345738	ENSG00000243596.1	-	processed_pseudogene	KNOWN	RP11-758I14.2	1	3	-0.218650
chr3	146391363	146416603	146403983	ENSG00000241358.1	-	transcribed_processed_pseudogene	KNOWN	RP11-758I14.3	2	5	-0.554067
chr3	146391421	146495991	146443706	ENSG00000163746.11	-	protein_coding	KNOWN	PLSCR2	7	10	-0.429027
chr3	146504570	146506560	146505565	ENSG00000279320.1	-	TEC	KNOWN	RP11-329N15.3	1	1	-0.147196
chr3	146515180	146544864	146530022	ENSG00000188313.12	-	protein_coding	KNOWN	PLSCR1	19	9	-0.387847
chr3	146571477	146571583	146571530	ENSG00000199812.1	+	snRNA	KNOWN	RNU6-428P	1	1	-0.639191
chr3	146576555	146606216	146591385	ENSG00000231213.6	-	protein_coding	KNOWN	PLSCR5	3	8	-0.534043
chr3	146589602	146590325	146589963	ENSG00000241457.1	+	antisense	KNOWN	PLSCR5-AS1	1	2	-0.552475
chr3	146909685	147370656	147140170	ENSG00000243620.1	-	antisense	KNOWN	RP11-649A16.1	1	6	-0.525800
chr3	146921923	146925218	146923570	ENSG00000242671.1	+	lincRNA	KNOWN	RP11-232M24.1	2	3	-0.414469
chr3	146996607	146996713	146996660	ENSG00000207156.1	-	snRNA	KNOWN	RNU6-505P	1	1	-0.542923
chr3	147276768	147277252	147277010	ENSG00000239412.1	+	processed_pseudogene	KNOWN	RPL21P71	1	2	-0.550246
chr3	147386046	147406860	147396453	ENSG00000174963.17	-	protein_coding	KNOWN	ZIC4	17	5	0.142178
chr3	147386967	147387453	147387210	ENSG00000241202.1	+	antisense	KNOWN	ZIC4-AS1	1	2	-0.250695
chr3	147393422	147510293	147451857	ENSG00000152977.9	+	protein_coding	KNOWN	ZIC1	5	3	-0.432167
chr3	147590996	147591835	147591415	ENSG00000240804.1	-	processed_pseudogene	KNOWN	NPM1P28	1	1	-0.874456
chr3	147844123	147846657	147845390	ENSG00000239661.1	-	lincRNA	KNOWN	RP11-78O22.1	1	3	-0.516430
chr3	147911406	147911501	147911453	ENSG00000221431.1	-	miRNA	NOVEL	AC092925.1	1	1	-0.604332
chr3	147940004	148006755	147973379	ENSG00000239922.1	+	lincRNA	KNOWN	RP11-71N10.1	2	4	-0.294897
chr3	148078159	148088029	148083094	ENSG00000241131.1	+	lincRNA	KNOWN	RP11-639B1.1	1	2	-0.974679
chr3	148080833	148080922	148080877	ENSG00000221457.2	-	miRNA	NOVEL	AC092958.1	1	1	-0.974679
chr3	148093175	148127233	148110204	ENSG00000241792.1	+	lincRNA	KNOWN	RP11-501O2.1	1	4	-0.889947
chr3	148160911	148226606	148193758	ENSG00000244650.2	+	lincRNA	KNOWN	RP11-501O2.3	2	3	-0.755332
chr3	148166344	148167298	148166821	ENSG00000205412.5	-	processed_pseudogene	KNOWN	HNRNPA1P20	1	1	-0.300326
chr3	148195729	148280098	148237913	ENSG00000243347.1	-	lincRNA	KNOWN	RP11-501O2.4	1	5	-0.688685
chr3	148280891	148399956	148340423	ENSG00000242440.1	+	lincRNA	KNOWN	RP11-501O2.5	2	3	-0.589820
chr3	148695994	148696204	148696099	ENSG00000241993.1	-	processed_pseudogene	KNOWN	RPL38P1	1	1	-0.535349
chr3	148697784	148743008	148720396	ENSG00000144891.17	+	protein_coding	KNOWN	AGTR1	9	5	-0.408558
chr3	148791102	148860187	148825644	ENSG00000153002.11	+	protein_coding	KNOWN	CPB1	10	12	-0.480315
chr3	148824782	148825387	148825084	ENSG00000244089.1	-	processed_pseudogene	KNOWN	HMGB1P30	1	1	-0.412481
chr3	148850933	148960112	148905522	ENSG00000240521.1	-	antisense	KNOWN	RP11-680B3.2	1	5	-0.299181
chr3	148865256	148897196	148881226	ENSG00000163751.3	+	protein_coding	KNOWN	CPA3	2	11	-0.188675
chr3	148985868	148987668	148986768	ENSG00000241627.3	-	processed_pseudogene	KNOWN	UBQLN4P1	1	1	-0.077933
chr3	148991341	149027668	149009504	ENSG00000163754.17	+	protein_coding	KNOWN	GYG1	14	8	0.011800
chr3	149030127	149086554	149058340	ENSG00000071794.15	-	protein_coding	KNOWN	HLTF	9	26	-0.266766
chr3	149086332	149102823	149094577	ENSG00000239718.1	+	antisense	KNOWN	HLTF-AS1	1	3	-0.065413
chr3	149094353	149094462	149094407	ENSG00000201031.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.004516
chr3	149099499	149099815	149099657	ENSG00000240511.1	-	processed_pseudogene	KNOWN	MED28P2	1	1	-0.004516
chr3	149129584	149173732	149151658	ENSG00000163755.8	+	protein_coding	KNOWN	HPS3	7	17	0.022486
chr3	149162410	149222055	149192232	ENSG00000047457.13	-	protein_coding	KNOWN	CP	15	19	-0.024596
chr3	149229356	149291800	149260578	ENSG00000240216.7	-	unitary_pseudogene	KNOWN	CPHL1P	4	20	-0.056013
chr3	149284782	149333653	149309217	ENSG00000244468.1	+	antisense	KNOWN	RP11-206M11.7	1	2	-0.070439
chr3	149318498	149334414	149326456	ENSG00000163762.6	-	protein_coding	KNOWN	TM4SF18	5	6	-0.202633
chr3	149357169	149357545	149357357	ENSG00000243822.1	-	processed_pseudogene	KNOWN	RP11-2G17.1	1	1	-0.088090
chr3	149369022	149377865	149373443	ENSG00000169908.10	-	protein_coding	KNOWN	TM4SF1	5	6	0.165468
chr3	149377778	149386583	149382180	ENSG00000240541.2	+	antisense	KNOWN	TM4SF1-AS1	2	3	0.196961
chr3	149384179	149385800	149384989	ENSG00000243885.1	-	lincRNA	KNOWN	RP11-278L15.2	1	2	0.196961
chr3	149433044	149433274	149433159	ENSG00000240246.1	-	processed_pseudogene	KNOWN	RP11-167H9.1	1	1	-0.328012
chr3	149462182	149464830	149463506	ENSG00000241929.1	-	processed_pseudogene	KNOWN	RP11-278L15.3	1	2	0.154533
chr3	149463779	149464114	149463946	ENSG00000282502.1	-	processed_pseudogene	KNOWN	RP11-278L15.7	1	1	0.154533
chr3	149464839	149465201	149465020	ENSG00000239408.1	-	processed_pseudogene	KNOWN	RP11-278L15.4	1	1	0.154533
chr3	149473974	149503281	149488627	ENSG00000169903.6	+	protein_coding	KNOWN	TM4SF4	3	5	0.127340
chr3	149494660	149495995	149495327	ENSG00000244503.1	+	processed_pseudogene	KNOWN	RP11-278L15.6	1	1	0.006684
chr3	149517235	149736714	149626974	ENSG00000018408.14	-	protein_coding	KNOWN	WWTR1	12	8	0.027209
chr3	149525631	149525726	149525678	ENSG00000252581.1	+	snRNA	KNOWN	RNU6-1098P	1	1	0.285716
chr3	149648997	149650184	149649590	ENSG00000241985.1	-	sense_intronic	KNOWN	WWTR1-IT1	1	2	0.179198
chr3	149657020	149661364	149659192	ENSG00000241313.2	+	antisense	KNOWN	WWTR1-AS1	3	3	0.355026
chr3	149738470	149752499	149745484	ENSG00000114744.8	-	protein_coding	KNOWN	COMMD2	7	6	-0.023998
chr3	149761105	149968385	149864745	ENSG00000206199.9	-	protein_coding	KNOWN	ANKUB1	9	6	-0.201550
chr3	149766814	149766883	149766848	ENSG00000281611.1	+	miRNA	NOVEL	AC069216.1	1	1	-0.297955
chr3	149779009	149779108	149779058	ENSG00000251854.1	-	snRNA	KNOWN	RNU6-507P	1	1	-0.219210
chr3	149812708	149962139	149887423	ENSG00000082996.19	+	protein_coding	KNOWN	RNF13	16	11	-0.219256
chr3	149917342	149917449	149917395	ENSG00000252172.1	-	snRNA	KNOWN	RNU6-720P	1	1	-0.255027
chr3	149938997	149939799	149939398	ENSG00000239351.1	-	processed_pseudogene	KNOWN	NPM1P29	1	1	-0.069371
chr3	149964904	150050788	150007846	ENSG00000070087.13	-	protein_coding	KNOWN	PFN2	17	4	0.035783
chr3	149976755	149979355	149978055	ENSG00000242791.2	+	lincRNA	KNOWN	RP11-651P23.5	2	3	0.014513
chr3	149982181	149983308	149982744	ENSG00000224831.3	-	processed_pseudogene	KNOWN	RP11-651P23.4	1	1	0.014513
chr3	149984395	149984797	149984596	ENSG00000182000.9	+	processed_pseudogene	KNOWN	RP11-651P23.2	1	1	0.014513
chr3	149999645	150000690	150000167	ENSG00000241947.1	+	processed_pseudogene	KNOWN	HNRNPA1P24	1	1	-0.012978
chr3	150039214	150213726	150126470	ENSG00000243944.5	+	antisense	KNOWN	RP11-167H9.4	3	3	-0.000583
chr3	150050729	150051456	150051092	ENSG00000240477.1	+	processed_pseudogene	KNOWN	RP11-63E16.1	1	1	0.133097
chr3	150077494	150080117	150078805	ENSG00000243321.3	-	lincRNA	KNOWN	RP11-167H9.3	1	2	0.243198
chr3	150150538	150150944	150150741	ENSG00000241143.1	+	transcribed_processed_pseudogene	KNOWN	RPL32P9	1	1	-0.130401
chr3	150202174	150225190	150213682	ENSG00000241048.1	-	lincRNA	KNOWN	RP11-167H9.5	1	6	-0.061065
chr3	150238519	150240209	150239364	ENSG00000244541.5	+	lincRNA	KNOWN	LINC01213	2	3	0.244762
chr3	150241777	150241860	150241818	ENSG00000278234.1	+	snRNA	NOVEL	U2	1	1	0.244762
chr3	150265412	150287373	150276392	ENSG00000243550.2	-	lincRNA	KNOWN	LINC01214	1	3	-0.138103
chr3	150408335	150466431	150437383	ENSG00000196428.12	+	protein_coding	KNOWN	TSC22D2	6	5	-0.173325
chr3	150541994	150603228	150572611	ENSG00000120742.10	-	protein_coding	KNOWN	SERP1	8	4	-0.131187
chr3	150546678	150584242	150565460	ENSG00000144895.11	+	protein_coding	KNOWN	EIF2A	16	14	-0.136494
chr3	150602875	150630445	150616660	ENSG00000198843.12	+	protein_coding	KNOWN	SELT	7	7	-0.065676
chr3	150611262	150611877	150611569	ENSG00000271711.1	-	processed_pseudogene	KNOWN	RP11-392O18.2	1	1	-0.040458
chr3	150659885	150703971	150681928	ENSG00000163645.14	-	protein_coding	KNOWN	ERICH6	5	14	-0.244822
chr3	150703564	150720146	150711855	ENSG00000240137.5	+	antisense	KNOWN	ERICH6-AS1	3	4	-0.371765
chr3	150719997	150720836	150720416	ENSG00000244668.1	-	processed_pseudogene	KNOWN	SNRPCP3	1	2	-0.325676
chr3	150741127	150763477	150752302	ENSG00000181788.3	-	protein_coding	KNOWN	SIAH2	3	3	-0.100536
chr3	150761937	150762538	150762237	ENSG00000244265.1	+	antisense	KNOWN	SIAH2-AS1	1	2	0.330931
chr3	150819598	150819972	150819785	ENSG00000280141.1	+	protein_coding	KNOWN	AC016142.1	1	1	-0.423650
chr3	150852484	151080726	150966605	ENSG00000239265.5	+	antisense	KNOWN	CLRN1-AS1	2	6	-0.343587
chr3	150871045	150891060	150881052	ENSG00000214237.9	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-166N6.1	2	7	-0.274337
chr3	150882997	150941743	150912370	ENSG00000260234.5	-	protein_coding	KNOWN	RP11-166N6.3	3	11	-0.237698
chr3	150890636	151038818	150964727	ENSG00000243273.1	+	antisense	KNOWN	RP11-166N6.2	1	3	-0.355828
chr3	150901154	150903394	150902274	ENSG00000244382.1	-	lincRNA	KNOWN	RP11-373I8.1	1	2	-0.227945
chr3	150926163	150972999	150949581	ENSG00000163646.10	-	protein_coding	KNOWN	CLRN1	6	4	-0.182428
chr3	151024046	151024181	151024113	ENSG00000281338.1	+	miRNA	NOVEL	AC020636.1	1	1	-0.403966
chr3	151079506	151079584	151079545	ENSG00000276055.1	+	misc_RNA	NOVEL	CLRN1-AS1	1	1	-0.467817
chr3	151085697	151437072	151261384	ENSG00000144893.12	+	protein_coding	KNOWN	MED12L	9	43	-0.318598
chr3	151188099	151188223	151188161	ENSG00000199994.1	+	rRNA	KNOWN	RNA5SP145	1	1	-0.404161
chr3	151197832	151203201	151200516	ENSG00000174946.6	-	protein_coding	KNOWN	GPR171	3	3	-0.232206
chr3	151212117	151278467	151245292	ENSG00000174944.8	-	protein_coding	KNOWN	P2RY14	3	4	-0.366148
chr3	151235948	151236036	151235992	ENSG00000264327.2	+	miRNA	NOVEL	AC078816.1	1	1	0.060283
chr3	151269440	151270129	151269784	ENSG00000239570.1	+	processed_pseudogene	KNOWN	SETP11	1	1	-0.716654
chr3	151294086	151316952	151305519	ENSG00000138271.5	-	protein_coding	KNOWN	GPR87	2	3	-0.167445
chr3	151326312	151329548	151327930	ENSG00000181631.6	-	protein_coding	KNOWN	P2RY13	1	2	-0.258695
chr3	151337380	151384812	151361096	ENSG00000169313.9	-	protein_coding	KNOWN	P2RY12	2	3	-0.362139
chr3	151425384	151458709	151442046	ENSG00000152580.8	-	protein_coding	KNOWN	IGSF10	5	6	-0.226550
chr3	151475804	151476174	151475989	ENSG00000242810.1	-	processed_pseudogene	KNOWN	MRPL42P6	1	1	-0.314825
chr3	151499639	151499806	151499722	ENSG00000242119.1	+	processed_pseudogene	KNOWN	RP11-312P21.2	1	1	-0.210571
chr3	151565876	151565995	151565935	ENSG00000264330.1	-	miRNA	KNOWN	MIR5186	1	1	-0.388634
chr3	151634350	151634463	151634406	ENSG00000222833.1	+	miRNA	NOVEL	AC069067.1	1	1	-0.263273
chr3	151637174	151657966	151647570	ENSG00000241151.1	+	lincRNA	KNOWN	RP11-454C18.1	1	3	-0.293044
chr3	151733916	151761339	151747627	ENSG00000197953.5	+	protein_coding	KNOWN	AADACL2	2	5	-0.517524
chr3	151751443	151928175	151839809	ENSG00000242908.6	-	antisense	KNOWN	AADACL2-AS1	2	5	-0.420352
chr3	151759747	151762011	151760879	ENSG00000242097.1	-	processed_pseudogene	KNOWN	RP11-64D22.1	1	1	-0.591535
chr3	151770428	151784894	151777661	ENSG00000240602.7	+	transcribed_unprocessed_pseudogene	KNOWN	AADACP1	6	5	-0.534391
chr3	151797484	151808249	151802866	ENSG00000250271.1	+	lincRNA	KNOWN	RP11-64D22.5	1	3	-0.662356
chr3	151814037	151828488	151821262	ENSG00000114771.13	+	protein_coding	KNOWN	AADAC	2	5	-0.159193
chr3	151873643	151884619	151879131	ENSG00000198829.6	+	protein_coding	KNOWN	SUCNR1	1	3	-0.512707
chr3	152118173	152151724	152134948	ENSG00000239941.1	-	lincRNA	KNOWN	RP11-246A10.1	1	2	-0.281019
chr3	152243828	152465780	152354804	ENSG00000152601.17	+	protein_coding	KNOWN	MBNL1	24	12	-0.201957
chr3	152262616	152269555	152266085	ENSG00000229619.3	-	antisense	KNOWN	MBNL1-AS1	2	2	-0.260680
chr3	152340527	152340904	152340715	ENSG00000221962.4	-	protein_coding	KNOWN	TMEM14EP	1	1	-0.480796
chr3	152449272	152449384	152449328	ENSG00000201217.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.359704
chr3	152457759	152496813	152477286	ENSG00000243305.1	-	antisense	KNOWN	RP11-362A9.3	1	2	-0.334186
chr3	152648146	152650447	152649296	ENSG00000244545.1	+	lincRNA	KNOWN	RP11-788A4.1	1	2	-0.667026
chr3	152800434	152800732	152800583	ENSG00000242561.1	-	processed_pseudogene	KNOWN	ATP5LP5	1	1	-0.271892
chr3	152834693	152841439	152838066	ENSG00000169860.6	+	protein_coding	KNOWN	P2RY1	1	1	-0.599886
chr3	152919730	152919796	152919763	ENSG00000273789.1	-	miRNA	NOVEL	AC013251.1	1	1	-0.154802
chr3	153067278	153067551	153067414	ENSG00000241810.1	+	processed_pseudogene	KNOWN	HMGN2P13	1	1	-0.247318
chr3	153129074	153129640	153129357	ENSG00000241671.1	-	processed_pseudogene	KNOWN	RP11-529G21.3	1	1	-0.172655
chr3	153156511	153161775	153159143	ENSG00000244268.1	-	antisense	KNOWN	RP11-529G21.2	1	2	-0.242427
chr3	153162270	153167173	153164721	ENSG00000181467.3	+	protein_coding	KNOWN	RAP2B	1	1	-0.242427
chr3	153199700	153200017	153199858	ENSG00000265813.2	-	misc_RNA	KNOWN	RN7SL300P	1	1	-0.398147
chr3	153357107	153374186	153365646	ENSG00000241220.1	+	lincRNA	KNOWN	RP11-292E2.1	1	2	-0.388853
chr3	153376831	153377562	153377196	ENSG00000241912.1	+	lincRNA	KNOWN	RP11-292E2.2	1	2	-0.217693
chr3	153384934	153980186	153682560	ENSG00000238755.3	-	processed_transcript	KNOWN	RP11-23D24.2	3	7	-0.536589
chr3	153431856	153443531	153437693	ENSG00000243012.1	+	lincRNA	KNOWN	RP11-292E2.4	1	3	-0.354691
chr3	153471466	153471571	153471518	ENSG00000207323.1	-	snRNA	KNOWN	RNU6-901P	1	1	-0.306998
chr3	153484495	153502697	153493596	ENSG00000237787.4	+	lincRNA	KNOWN	C3orf79	1	3	-0.365100
chr3	153607377	153607479	153607428	ENSG00000200162.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.518966
chr3	153881526	153940836	153911181	ENSG00000243486.1	+	lincRNA	KNOWN	RP11-217E22.5	1	6	-0.574459
chr3	154007367	154007502	154007434	ENSG00000201398.1	-	snoRNA	NOVEL	U8	1	1	-0.408437
chr3	154023835	154024298	154024066	ENSG00000240068.1	+	processed_pseudogene	KNOWN	RPL21P42	1	1	-0.511349
chr3	154024401	154121332	154072866	ENSG00000243069.7	-	processed_transcript	KNOWN	ARHGEF26-AS1	11	5	-0.461971
chr3	154121003	154257827	154189415	ENSG00000114790.12	+	protein_coding	KNOWN	ARHGEF26	5	15	-0.574349
chr3	154272546	154324497	154298521	ENSG00000174953.13	-	protein_coding	KNOWN	DHX36	13	25	-0.540980
chr3	154329716	154329819	154329767	ENSG00000271922.1	+	snoRNA	NOVEL	snoU13	1	1	-0.628486
chr3	154334809	154337047	154335928	ENSG00000279305.1	-	TEC	KNOWN	RP11-316N24.2	1	1	-0.622387
chr3	154337672	154429715	154383693	ENSG00000174948.5	-	protein_coding	KNOWN	GPR149	1	4	-0.541447
chr3	154352136	154354799	154353467	ENSG00000240048.1	-	processed_pseudogene	KNOWN	DDX50P2	1	2	-0.358401
chr3	154511535	154539309	154525422	ENSG00000243861.1	-	lincRNA	KNOWN	RP11-656A15.1	1	2	-0.605114
chr3	154651656	154652423	154652039	ENSG00000243154.1	-	processed_pseudogene	KNOWN	CTD-2501O3.2	1	1	-0.320269
chr3	154657294	154657563	154657428	ENSG00000242151.1	+	processed_pseudogene	KNOWN	DYNLL1P5	1	1	-0.320269
chr3	154676588	154677119	154676853	ENSG00000240601.1	-	processed_pseudogene	KNOWN	RPL9P15	1	1	-0.647693
chr3	154827016	154861017	154844016	ENSG00000243969.1	-	lincRNA	KNOWN	RP11-439C8.1	1	2	-0.222285
chr3	154969283	154970223	154969753	ENSG00000243953.1	-	lincRNA	KNOWN	RP11-439C8.2	1	2	-0.077805
chr3	155024124	155183729	155103926	ENSG00000196549.10	+	protein_coding	KNOWN	MME	18	23	-0.193577
chr3	155158370	155183285	155170827	ENSG00000240666.2	-	antisense	KNOWN	MME-AS1	1	2	-0.428592
chr3	155240945	155243144	155242044	ENSG00000241336.1	+	lincRNA	KNOWN	LINC01487	2	3	-0.213353
chr3	155290229	155293775	155292002	ENSG00000240045.1	-	lincRNA	KNOWN	RP11-451G4.2	1	3	-0.375614
chr3	155291188	155294176	155292682	ENSG00000242790.1	+	lincRNA	KNOWN	RP11-451G4.3	1	3	-0.375614
chr3	155309427	155309807	155309617	ENSG00000239443.1	-	processed_pseudogene	KNOWN	PABPC1P10	1	1	-0.375614
chr3	155375580	155745067	155560323	ENSG00000114805.16	-	protein_coding	KNOWN	PLCH1	6	24	-0.209825
chr3	155375683	155375790	155375736	ENSG00000248772.1	-	unprocessed_pseudogene	KNOWN	RP11-639F1.1	1	1	-0.325676
chr3	155401329	155403399	155402364	ENSG00000243518.1	-	processed_pseudogene	KNOWN	RP11-639F1.2	1	3	-0.054850
chr3	155431229	155433398	155432313	ENSG00000242152.1	-	processed_pseudogene	KNOWN	RP11-639F1.3	1	2	-0.019369
chr3	155437538	155437823	155437680	ENSG00000272096.2	-	misc_RNA	KNOWN	RN7SL715P	1	1	-0.019369
chr3	155449184	155457753	155453468	ENSG00000239508.1	+	antisense	KNOWN	PLCH1-AS1	1	2	-0.296596
chr3	155485803	155487121	155486462	ENSG00000242925.1	+	antisense	KNOWN	PLCH1-AS2	1	2	-0.237714
chr3	155657760	155658612	155658186	ENSG00000239212.2	+	processed_pseudogene	KNOWN	RPL6P7	1	1	-0.141599
chr3	155742142	155743726	155742934	ENSG00000214919.3	-	sense_intronic	KNOWN	RP11-674E16.4	1	1	-0.014923
chr3	155760617	155761217	155760917	ENSG00000241307.1	+	processed_pseudogene	KNOWN	RP11-674E16.1	1	1	-0.234112
chr3	155762617	155806351	155784484	ENSG00000174928.15	-	protein_coding	KNOWN	C3orf33	5	7	-0.064826
chr3	155821024	155854429	155837726	ENSG00000169359.13	-	protein_coding	KNOWN	SLC33A1	6	7	-0.093268
chr3	155870536	155944026	155907281	ENSG00000163655.15	+	protein_coding	KNOWN	GMPS	3	16	-0.084442
chr3	155987304	155988176	155987740	ENSG00000240489.1	+	processed_pseudogene	KNOWN	SETP14	1	1	-0.362040
chr3	156019646	156037647	156028646	ENSG00000174930.4	+	unitary_pseudogene	KNOWN	VN2R1P	1	5	-0.302675
chr3	156037701	156539138	156288419	ENSG00000169282.17	+	protein_coding	KNOWN	KCNAB1	15	14	-0.404214
chr3	156044155	156044948	156044551	ENSG00000242017.1	-	processed_pseudogene	KNOWN	ALG1L15P	1	1	-0.516054
chr3	156111432	156114198	156112815	ENSG00000242537.1	-	processed_pseudogene	KNOWN	MRE11B	1	3	-0.552349
chr3	156175852	156176911	156176381	ENSG00000227709.4	-	processed_pseudogene	KNOWN	RP11-118D22.3	1	1	-0.530060
chr3	156215560	156227883	156221721	ENSG00000240596.1	-	antisense	KNOWN	KCNAB1-AS2	1	4	-0.442345
chr3	156441157	156446905	156444031	ENSG00000242370.1	-	antisense	KNOWN	KCNAB1-AS1	1	3	-0.596807
chr3	156523740	156524247	156523993	ENSG00000272990.1	-	antisense	KNOWN	RP11-305K5.1	1	1	-0.579682
chr3	156540140	156555184	156547662	ENSG00000114850.6	-	protein_coding	KNOWN	SSR3	9	5	0.006131
chr3	156671862	156674378	156673120	ENSG00000243926.1	-	antisense	KNOWN	TIPARP-AS1	3	2	0.031691
chr3	156673235	156706770	156690002	ENSG00000163659.12	+	protein_coding	KNOWN	TIPARP	7	6	-0.132394
chr3	156713884	156714928	156714406	ENSG00000174912.7	-	processed_pseudogene	KNOWN	METTL15P1	1	1	0.032049
chr3	156747346	156817062	156782204	ENSG00000240875.5	-	lincRNA	KNOWN	LINC00886	3	3	-0.153796
chr3	156809551	156810732	156810141	ENSG00000230457.3	-	processed_pseudogene	KNOWN	PA2G4P4	1	1	-0.267678
chr3	156825481	157046129	156935805	ENSG00000197980.11	+	protein_coding	KNOWN	LEKR1	11	14	-0.394618
chr3	156977558	156977825	156977691	ENSG00000241879.1	+	processed_pseudogene	KNOWN	KLF3P2	1	1	-0.117185
chr3	156988117	156988712	156988414	ENSG00000239706.1	-	processed_pseudogene	KNOWN	RP11-6F2.3	1	1	-0.117185
chr3	157017342	157017696	157017519	ENSG00000222499.1	+	misc_RNA	KNOWN	RN7SKP177	1	1	-0.560085
chr3	157081667	157123004	157102335	ENSG00000243629.1	-	lincRNA	KNOWN	LINC00880	1	4	0.057323
chr3	157081841	157088547	157085194	ENSG00000241544.1	+	lincRNA	KNOWN	RP11-6F2.5	1	3	-0.201508
chr3	157089881	157101135	157095508	ENSG00000241135.5	+	lincRNA	KNOWN	LINC00881	3	3	0.239324
chr3	157146508	157160760	157153634	ENSG00000163660.11	-	protein_coding	KNOWN	CCNL1	26	13	-0.008670
chr3	157153548	157153640	157153594	ENSG00000201778.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.069000
chr3	157162663	157163932	157163297	ENSG00000244515.1	-	processed_pseudogene	KNOWN	KRT18P34	1	1	-0.069000
chr3	157163452	157169133	157166292	ENSG00000241770.1	+	antisense	KNOWN	RP11-555M1.3	1	2	-0.069000
chr3	157173918	157174040	157173979	ENSG00000222675.1	-	rRNA	KNOWN	RNA5SP146	1	1	0.442997
chr3	157175223	157381265	157278244	ENSG00000243176.5	+	processed_transcript	KNOWN	RP11-550I24.2	5	4	0.005664
chr3	157230320	157231208	157230764	ENSG00000270981.1	-	processed_pseudogene	KNOWN	RP11-550I24.3	1	1	0.024878
chr3	157259742	157533619	157396680	ENSG00000197415.11	-	protein_coding	KNOWN	VEPH1	19	14	-0.062068
chr3	157371476	157371601	157371538	ENSG00000280625.1	-	miRNA	NOVEL	AC092944.1	1	1	0.134303
chr3	157436789	157443628	157440208	ENSG00000163661.3	+	protein_coding	KNOWN	PTX3	1	3	-0.005983
chr3	157543246	157677749	157610497	ENSG00000174899.10	+	protein_coding	KNOWN	PQLC2L	7	5	-0.251797
chr3	157930492	157930725	157930608	ENSG00000251751.1	-	misc_RNA	KNOWN	RN7SKP46	1	1	-0.453004
chr3	157976561	157978136	157977348	ENSG00000239716.1	-	lincRNA	KNOWN	RP11-290K4.1	1	2	-0.360076
chr3	158016216	158088997	158052606	ENSG00000242536.1	-	lincRNA	KNOWN	RP11-290K4.2	2	5	-0.392560
chr3	158095954	158106503	158101228	ENSG00000168779.19	-	protein_coding	KNOWN	SHOX2	6	6	-0.343593
chr3	158105855	158545730	158325792	ENSG00000174891.12	+	protein_coding	KNOWN	RSRC1	15	11	-0.469212
chr3	158275809	158276421	158276115	ENSG00000241723.1	-	processed_pseudogene	KNOWN	RP11-113A11.1	1	1	-0.540703
chr3	158336430	158336777	158336603	ENSG00000277143.1	-	processed_pseudogene	KNOWN	RP11-113A11.3	1	1	-0.527186
chr3	158496561	158496934	158496747	ENSG00000243314.1	+	processed_pseudogene	KNOWN	RP11-538P18.1	1	1	-0.709463
chr3	158545220	158571066	158558143	ENSG00000243150.5	-	antisense	KNOWN	RP11-538P18.2	2	5	-0.414295
chr3	158571163	158607252	158589207	ENSG00000178053.17	+	protein_coding	KNOWN	MLF1	17	9	-0.393530
chr3	158609610	158610857	158610233	ENSG00000243025.1	-	processed_pseudogene	KNOWN	MTAPP1	1	2	-0.652321
chr3	158626656	158626849	158626752	ENSG00000243165.1	-	processed_pseudogene	KNOWN	RP11-79M21.3	1	1	-0.613438
chr3	158644278	158692575	158668426	ENSG00000168827.14	+	protein_coding	KNOWN	GFM1	11	19	-0.300944
chr3	158645822	158672693	158659257	ENSG00000079257.7	-	protein_coding	KNOWN	LXN	2	6	-0.406796
chr3	158693120	158693768	158693444	ENSG00000272087.1	-	lincRNA	KNOWN	RP11-379F4.7	1	1	-0.041864
chr3	158695367	158695581	158695474	ENSG00000272440.1	+	lincRNA	KNOWN	RP11-379F4.6	1	1	-0.041864
chr3	158696892	158732696	158714794	ENSG00000118849.9	-	protein_coding	KNOWN	RARRES1	5	6	0.133869
chr3	158732198	158829719	158780958	ENSG00000118855.18	+	protein_coding	KNOWN	MFSD1	19	16	-0.011894
chr3	158732263	158784070	158758166	ENSG00000240207.6	+	antisense	KNOWN	RP11-379F4.4	6	6	0.117370
chr3	158763431	158763753	158763592	ENSG00000243675.1	+	processed_pseudogene	KNOWN	RP11-379F4.1	1	1	-0.146356
chr3	158782547	158783124	158782835	ENSG00000271778.1	+	sense_intronic	KNOWN	RP11-379F4.8	1	1	0.230271
chr3	158801257	158801935	158801596	ENSG00000272247.1	-	antisense	KNOWN	RP11-379F4.9	1	1	-0.157986
chr3	158841093	158841960	158841526	ENSG00000232374.5	-	processed_pseudogene	KNOWN	GPR79	1	1	-0.377493
chr3	158869898	158871821	158870859	ENSG00000279311.1	+	TEC	KNOWN	RP11-170K4.2	1	1	-0.493741
chr3	158962235	159897366	159429800	ENSG00000250588.6	+	protein_coding	KNOWN	IQCJ-SCHIP1	14	11	-0.293032
chr3	158962928	159266307	159114617	ENSG00000214216.10	+	protein_coding	KNOWN	IQCJ	4	5	-0.398694
chr3	159282646	159282734	159282690	ENSG00000263634.1	+	miRNA	KNOWN	MIR3919	1	1	-0.446601
chr3	159386756	159387440	159387098	ENSG00000244249.1	-	processed_pseudogene	KNOWN	RP11-441M10.1	1	1	-0.459993
chr3	159721524	159722401	159721962	ENSG00000243116.1	-	processed_pseudogene	KNOWN	RP11-564C24.1	1	1	-0.008172
chr3	159765387	159768612	159766999	ENSG00000241211.1	-	antisense	KNOWN	IQCJ-SCHIP1-AS1	2	2	0.037836
chr3	159808416	159808570	159808493	ENSG00000252763.1	-	snRNA	KNOWN	RNU2-31P	1	1	0.023820
chr3	159822612	159822695	159822653	ENSG00000264146.1	-	miRNA	NOVEL	AC021654.1	1	1	0.040064
chr3	159839861	159897360	159868610	ENSG00000151967.18	+	protein_coding	KNOWN	SCHIP1	8	7	-0.024605
chr3	159913400	160225299	160069349	ENSG00000244040.5	-	antisense	KNOWN	IL12A-AS1	3	10	0.021384
chr3	159988750	159996019	159992384	ENSG00000168811.6	+	protein_coding	KNOWN	IL12A	6	7	-0.069928
chr3	160016024	160031423	160023723	ENSG00000242107.2	+	lincRNA	KNOWN	LINC01100	1	5	-0.158495
chr3	160100850	160102793	160101821	ENSG00000184100.6	+	processed_pseudogene	KNOWN	BRD7P2	1	1	-0.143298
chr3	160225636	160228213	160226924	ENSG00000180044.4	+	protein_coding	KNOWN	C3orf80	3	2	-0.107849
chr3	160227454	160449829	160338641	ENSG00000248710.1	-	protein_coding	KNOWN	RP11-432B6.3	1	19	-0.260867
chr3	160256986	160399880	160328433	ENSG00000068885.14	-	protein_coding	KNOWN	IFT80	27	21	-0.291139
chr3	160342685	160343015	160342850	ENSG00000243687.1	+	processed_pseudogene	KNOWN	RP11-432B6.1	1	1	-0.165806
chr3	160399274	160434962	160417118	ENSG00000113810.15	+	protein_coding	KNOWN	SMC4	27	24	-0.079563
chr3	160404588	160404685	160404636	ENSG00000207779.1	+	miRNA	KNOWN	MIR15B	1	1	-0.012804
chr3	160404745	160404825	160404785	ENSG00000198987.1	+	miRNA	KNOWN	MIR16-2	1	1	-0.012804
chr3	160432445	160485773	160459109	ENSG00000213186.7	-	protein_coding	KNOWN	TRIM59	8	4	0.067805
chr3	160452598	160453403	160453000	ENSG00000244009.1	+	processed_pseudogene	KNOWN	B3GAT3P1	1	1	0.131958
chr3	160472348	160472416	160472382	ENSG00000238427.1	-	snRNA	KNOWN	RNU7-136P	1	1	0.105602
chr3	160494995	160565588	160530291	ENSG00000186432.8	-	protein_coding	KNOWN	KPNA4	3	17	-0.110962
chr3	160514907	160515236	160515071	ENSG00000238741.1	-	scaRNA	KNOWN	SCARNA7	1	1	0.062244
chr3	160565447	160569248	160567347	ENSG00000229320.3	+	transcribed_processed_pseudogene	KNOWN	KRT8P12	2	3	-0.330699
chr3	160584945	160585787	160585366	ENSG00000242285.1	+	processed_pseudogene	KNOWN	RPL6P8	1	1	-0.071507
chr3	160677159	160678452	160677805	ENSG00000179674.3	+	protein_coding	KNOWN	ARL14	1	1	-0.535406
chr3	160696929	160697060	160696994	ENSG00000207084.1	+	snoRNA	NOVEL	SNORA72	1	1	-0.358401
chr3	160753428	160755142	160754285	ENSG00000260572.1	-	antisense	KNOWN	RP11-16N11.2	1	1	-0.405023
chr3	160755602	161078907	160917254	ENSG00000163590.13	+	protein_coding	KNOWN	PPM1L	5	6	-0.454976
chr3	161083883	161105384	161094633	ENSG00000169255.13	-	protein_coding	KNOWN	B3GALNT1	18	8	-0.348015
chr3	161104696	161253532	161179114	ENSG00000169251.12	+	protein_coding	KNOWN	NMD3	10	17	-0.486502
chr3	161222911	161223147	161223029	ENSG00000271052.1	-	processed_pseudogene	KNOWN	RP11-479I16.2	1	1	-0.900314
chr3	161324913	161326219	161325566	ENSG00000240138.1	-	processed_pseudogene	KNOWN	EEF1GP4	1	1	-0.570313
chr3	161328924	161330238	161329581	ENSG00000243838.1	-	processed_pseudogene	KNOWN	PSMC1P7	1	1	-0.566339
chr3	161344792	161372880	161358836	ENSG00000196542.8	-	protein_coding	KNOWN	SPTSSB	5	4	-0.499841
chr3	161426427	161448242	161437334	ENSG00000240567.1	+	lincRNA	KNOWN	RP11-3P17.4	1	4	-0.801933
chr3	161429112	161429613	161429362	ENSG00000269888.1	+	lincRNA	KNOWN	RP11-3P17.5	1	2	-0.480147
chr3	161429127	161429597	161429362	ENSG00000234851.4	-	processed_pseudogene	KNOWN	RPL23AP42	1	1	-0.480147
chr3	161496808	161503942	161500375	ENSG00000182447.4	+	protein_coding	KNOWN	OTOL1	1	4	-0.999156
chr3	161816909	161821908	161819408	ENSG00000240354.1	-	lincRNA	KNOWN	RP11-774I5.1	1	2	-0.587675
chr3	162486541	162486949	162486745	ENSG00000241874.1	-	processed_pseudogene	KNOWN	TOMM22P6	1	1	-0.862205
chr3	162601627	162601792	162601709	ENSG00000243044.1	+	processed_pseudogene	KNOWN	RP13-526J3.1	1	1	-0.445381
chr3	163026396	163232149	163129272	ENSG00000241168.1	+	lincRNA	KNOWN	RP11-10O22.1	1	5	-0.707796
chr3	163115429	163116186	163115807	ENSG00000244571.1	+	processed_pseudogene	KNOWN	RP11-535I24.2	1	1	-0.591824
chr3	163127923	163361563	163244743	ENSG00000241369.5	-	lincRNA	KNOWN	LINC01192	9	8	-0.724917
chr3	163470205	163470266	163470235	ENSG00000238924.2	-	snRNA	KNOWN	RNU7-163P	1	1	-0.710328
chr3	163475067	163479365	163477216	ENSG00000240792.1	+	lincRNA	KNOWN	RP11-418B12.1	1	2	-0.710328
chr3	163516402	163516487	163516444	ENSG00000265090.1	-	miRNA	NOVEL	AC104637.1	1	1	-0.549215
chr3	164001606	164002465	164002035	ENSG00000214210.4	-	processed_pseudogene	KNOWN	RP11-208P4.1	1	1	-0.667745
chr3	164171471	164171556	164171513	ENSG00000221251.1	-	miRNA	KNOWN	MIR1263	1	1	-0.862205
chr3	164670878	164686076	164678477	ENSG00000241636.1	-	lincRNA	KNOWN	LINC01323	1	4	-1.033539
chr3	164714095	164831480	164772787	ENSG00000241767.2	-	lincRNA	KNOWN	LINC01324	2	4	-0.674526
chr3	164978898	165078495	165028696	ENSG00000090402.7	-	protein_coding	KNOWN	SI	3	48	-0.746886
chr3	165122713	165122823	165122768	ENSG00000200052.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.817243
chr3	165150006	165158062	165154034	ENSG00000239205.1	-	lincRNA	KNOWN	RP11-747D18.1	1	2	-0.607254
chr3	165186720	165197109	165191914	ENSG00000121871.3	-	protein_coding	KNOWN	SLITRK3	3	2	-0.423529
chr3	165206960	165655423	165431191	ENSG00000244128.5	+	lincRNA	KNOWN	LINC01322	4	6	-0.616838
chr3	165772904	165837472	165805188	ENSG00000114200.9	-	protein_coding	KNOWN	BCHE	5	5	-0.999606
chr3	166160021	166160370	166160195	ENSG00000242178.1	-	processed_pseudogene	KNOWN	MTND4P17	1	1	-0.641493
chr3	166160414	166160704	166160559	ENSG00000240084.1	-	processed_pseudogene	KNOWN	MTND4LP10	1	1	-0.641493
chr3	166160777	166161119	166160948	ENSG00000240824.1	-	processed_pseudogene	KNOWN	MTND3P7	1	1	-0.641493
chr3	166161203	166161968	166161585	ENSG00000242456.1	-	processed_pseudogene	KNOWN	RP11-12N13.4	1	1	-0.641493
chr3	166181313	166181820	166181566	ENSG00000242326.1	-	processed_pseudogene	KNOWN	RP11-12N13.2	1	1	-0.683968
chr3	166293756	166294353	166294054	ENSG00000244429.1	+	processed_pseudogene	KNOWN	RP11-12N13.1	1	1	-0.989950
chr3	166569693	166570763	166570228	ENSG00000244321.1	-	lincRNA	KNOWN	LINC01326	1	2	-0.971034
chr3	166605188	166605455	166605321	ENSG00000274149.1	+	processed_pseudogene	KNOWN	RP11-450H5.4	1	1	-0.864419
chr3	166670029	166670122	166670075	ENSG00000251759.1	-	misc_RNA	KNOWN	RN7SKP298	1	1	-0.433328
chr3	166691187	166691712	166691449	ENSG00000224962.4	+	processed_pseudogene	KNOWN	PSAT1P4	1	1	-0.756005
chr3	166721458	166721610	166721534	ENSG00000240458.1	+	processed_pseudogene	KNOWN	RP11-450H5.3	1	1	-0.247097
chr3	166811009	166811567	166811288	ENSG00000231516.3	+	processed_pseudogene	KNOWN	CBX1P5	1	1	-0.804915
chr3	166829227	166829294	166829260	ENSG00000276661.1	+	miRNA	NOVEL	AC128686.1	1	1	-0.804915
chr3	166835021	166844956	166839988	ENSG00000240033.1	-	lincRNA	KNOWN	RP11-12K11.2	1	2	-0.751283
chr3	166861944	166862110	166862027	ENSG00000239227.1	+	processed_pseudogene	KNOWN	RP11-12K11.1	1	1	-0.264943
chr3	167025413	167025499	167025456	ENSG00000215922.1	+	miRNA	NOVEL	AC092965.1	1	1	-0.133301
chr3	167065831	167066320	167066075	ENSG00000220343.5	+	processed_pseudogene	KNOWN	RP11-440K22.1	1	1	-0.497146
chr3	167240287	167381346	167310816	ENSG00000169064.12	-	protein_coding	KNOWN	ZBBX	13	21	-0.630843
chr3	167392796	167408519	167400657	ENSG00000241669.1	+	lincRNA	KNOWN	LINC01327	1	4	-0.651036
chr3	167441789	167479004	167460396	ENSG00000114204.14	-	protein_coding	KNOWN	SERPINI2	9	10	-0.576825
chr3	167478684	167653983	167566333	ENSG00000174776.10	-	protein_coding	KNOWN	WDR49	9	15	-0.595409
chr3	167683298	167734939	167709118	ENSG00000114209.14	-	protein_coding	KNOWN	PDCD10	18	9	-0.515716
chr3	167694355	167694642	167694498	ENSG00000241120.1	-	processed_pseudogene	KNOWN	HMGN1P8	1	1	-0.389877
chr3	167735243	167825568	167780405	ENSG00000163536.12	+	protein_coding	KNOWN	SERPINI1	7	9	-0.440068
chr3	167864773	167876917	167870845	ENSG00000242924.1	+	lincRNA	KNOWN	RP11-298O21.6	1	2	-0.584825
chr3	167864849	167866614	167865731	ENSG00000244214.1	+	lincRNA	KNOWN	RP11-298O21.7	1	2	-0.531860
chr3	167866500	167870977	167868738	ENSG00000244706.2	-	lincRNA	KNOWN	RP11-298O21.3	1	3	-0.552171
chr3	167866635	167883382	167875008	ENSG00000240292.1	+	lincRNA	KNOWN	RP11-298O21.2	1	7	-0.606160
chr3	167888414	167888715	167888564	ENSG00000239238.1	+	processed_pseudogene	KNOWN	MEMO1P3	1	1	-0.624836
chr3	167895948	167924011	167909979	ENSG00000244227.5	+	lincRNA	KNOWN	LINC01330	7	8	-0.669876
chr3	167956311	167956616	167956463	ENSG00000242036.1	-	processed_pseudogene	KNOWN	RP11-603B13.1	1	1	-0.505682
chr3	167958744	167959082	167958913	ENSG00000241203.1	+	processed_pseudogene	KNOWN	HMGN2P26	1	1	-0.505682
chr3	168008677	168095975	168052326	ENSG00000173905.8	-	protein_coding	KNOWN	GOLIM4	3	16	-0.471157
chr3	168203509	168203600	168203554	ENSG00000266363.1	+	miRNA	NOVEL	AC069243.1	1	1	-0.215676
chr3	168249522	168830599	168540060	ENSG00000206120.11	+	unitary_pseudogene	KNOWN	EGFEM1P	13	12	-0.602658
chr3	168288553	168291228	168289890	ENSG00000241882.1	+	lincRNA	KNOWN	RP11-637O11.2	1	2	-0.639157
chr3	168475198	168475388	168475293	ENSG00000222357.1	+	snRNA	KNOWN	RNU2-20P	1	1	-0.641728
chr3	168551854	168551949	168551901	ENSG00000207717.1	+	miRNA	KNOWN	MIR551B	1	1	-0.195290
chr3	168666559	168667423	168666991	ENSG00000226765.1	+	processed_pseudogene	KNOWN	RPSAP33	1	1	-0.754299
chr3	168858659	168859130	168858894	ENSG00000231688.1	-	processed_pseudogene	KNOWN	RPL21P43	1	1	-0.571581
chr3	168903366	168921996	168912681	ENSG00000242268.2	+	lincRNA	KNOWN	RP11-368I23.2	1	4	-0.462823
chr3	168927475	168927919	168927697	ENSG00000272797.1	+	lincRNA	KNOWN	RP11-368I23.3	1	1	-0.483510
chr3	168928169	168928598	168928383	ENSG00000273177.1	+	lincRNA	KNOWN	RP11-368I23.4	1	1	-0.483510
chr3	169003074	169005466	169004270	ENSG00000241383.1	+	lincRNA	KNOWN	RP11-152C17.1	1	2	-0.664083
chr3	169083499	169663618	169373558	ENSG00000085276.17	-	protein_coding	KNOWN	MECOM	19	17	-0.497365
chr3	169447867	169477052	169462459	ENSG00000241479.1	+	antisense	KNOWN	RP11-641D5.2	1	5	-0.558705
chr3	169483671	169484080	169483875	ENSG00000213178.3	-	processed_pseudogene	KNOWN	RP11-641D5.1	1	1	-0.501533
chr3	169483709	169483946	169483827	ENSG00000281137.1	+	protein_coding	KNOWN	AC074033.1	1	2	-0.501533
chr3	169613510	169623951	169618730	ENSG00000242795.2	-	sense_intronic	KNOWN	RP11-3K16.2	1	3	-0.418203
chr3	169709295	169709765	169709530	ENSG00000244381.1	+	processed_pseudogene	KNOWN	RP11-3K16.1	1	1	-0.378035
chr3	169720187	169720293	169720240	ENSG00000206777.1	-	snRNA	KNOWN	RNU6-637P	1	1	-0.500833
chr3	169764520	169765060	169764790	ENSG00000270141.3	-	lincRNA	KNOWN	TERC	1	1	-0.204990
chr3	169764610	169765047	169764828	ENSG00000277925.1	-	misc_RNA	NOVEL	Telomerase-vert	1	1	-0.204990
chr3	169766921	169769895	169768408	ENSG00000184378.2	-	protein_coding	KNOWN	ACTRT3	1	2	-0.204990
chr3	169769649	169772043	169770846	ENSG00000269889.1	+	antisense	KNOWN	RP11-816J6.3	1	2	0.056704
chr3	169772831	169789716	169781273	ENSG00000085274.15	+	protein_coding	KNOWN	MYNN	5	9	0.101515
chr3	169777192	169780334	169778763	ENSG00000269984.1	-	antisense	KNOWN	RP11-362K14.5	1	1	0.101515
chr3	169793428	169812986	169803207	ENSG00000171757.15	-	protein_coding	KNOWN	LRRC34	12	11	-0.470236
chr3	169793495	169793966	169793730	ENSG00000270135.1	+	antisense	KNOWN	RP11-362K14.7	1	1	-0.492971
chr3	169794962	169796213	169795587	ENSG00000270096.1	+	antisense	KNOWN	RP11-362K14.6	1	1	-0.492971
chr3	169821922	169837775	169829848	ENSG00000188306.6	+	protein_coding	KNOWN	LRRIQ4	1	5	-0.304163
chr3	169839179	169869930	169854554	ENSG00000114248.9	-	protein_coding	KNOWN	LRRC31	4	9	-0.158462
chr3	169902980	169904260	169903620	ENSG00000240128.1	-	processed_pseudogene	KNOWN	KRT18P43	1	1	0.189090
chr3	169911572	169939175	169925373	ENSG00000187033.9	+	protein_coding	KNOWN	SAMD7	3	9	-0.218911
chr3	169931998	169933229	169932613	ENSG00000244039.1	+	processed_pseudogene	KNOWN	RP11-379K17.2	1	1	0.235483
chr3	169939353	169966734	169953043	ENSG00000239219.2	-	antisense	KNOWN	RP11-379K17.4	4	3	-0.021159
chr3	169945987	169946754	169946370	ENSG00000244193.1	-	transcribed_processed_pseudogene	KNOWN	RP11-379K17.5	1	1	0.235483
chr3	169966635	169998373	169982504	ENSG00000008952.16	+	protein_coding	KNOWN	SEC62	10	9	-0.323434
chr3	169978536	169985715	169982125	ENSG00000240373.1	-	antisense	KNOWN	SEC62-AS1	1	2	-0.368426
chr3	170037929	170085403	170061666	ENSG00000173890.16	+	protein_coding	KNOWN	GPR160	10	5	-0.227181
chr3	170057301	170057429	170057365	ENSG00000201342.1	+	snRNA	KNOWN	RNU4-38P	1	1	-0.225748
chr3	170062244	170062951	170062597	ENSG00000242583.1	+	processed_pseudogene	KNOWN	RP11-379K17.9	1	1	-0.225748
chr3	170086732	170181749	170134240	ENSG00000173889.15	-	protein_coding	KNOWN	PHC3	17	15	-0.108597
chr3	170087810	170089590	170088700	ENSG00000268220.1	+	antisense	KNOWN	RP11-379K17.12	1	1	-0.300793
chr3	170149845	170149951	170149898	ENSG00000199536.1	+	snRNA	KNOWN	RNU6-315P	1	1	0.147845
chr3	170222365	170305981	170264173	ENSG00000163558.12	+	protein_coding	KNOWN	PRKCI	7	18	-0.031909
chr3	170244782	170244881	170244831	ENSG00000200118.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.019842
chr3	170345678	170353961	170349819	ENSG00000239628.1	+	lincRNA	KNOWN	RP11-543D10.2	1	2	0.145189
chr3	170357678	170396835	170377256	ENSG00000136603.13	+	protein_coding	KNOWN	SKIL	10	8	0.123561
chr3	170410512	170418615	170414563	ENSG00000242578.1	+	lincRNA	KNOWN	RP11-469J4.3	1	4	0.227079
chr3	170418865	170860380	170639622	ENSG00000013297.10	+	protein_coding	KNOWN	CLDN11	9	6	0.001778
chr3	170459584	170586074	170522829	ENSG00000013293.5	-	protein_coding	KNOWN	SLC7A14	2	8	-0.017444
chr3	170495627	170496636	170496131	ENSG00000241416.1	+	processed_pseudogene	KNOWN	KRT8P13	1	1	0.127441
chr3	170496131	170496263	170496197	ENSG00000281375.1	-	miRNA	NOVEL	AC008041.1	1	1	0.127441
chr3	170653846	170654259	170654052	ENSG00000213174.3	-	processed_pseudogene	KNOWN	RP11-373E16.1	1	1	0.114712
chr3	170656562	170662123	170659342	ENSG00000244738.1	+	sense_intronic	KNOWN	RP11-373E16.3	1	2	0.114712
chr3	170740351	170741365	170740858	ENSG00000239739.1	-	lincRNA	KNOWN	RP11-373E16.4	1	2	0.107422
chr3	170864875	170870483	170867679	ENSG00000163584.17	-	protein_coding	KNOWN	RPL22L1	6	4	0.037569
chr3	170888415	170908693	170898554	ENSG00000163577.7	-	protein_coding	KNOWN	EIF5A2	5	5	-0.159255
chr3	170952850	170953897	170953373	ENSG00000240704.1	-	processed_pseudogene	KNOWN	KLF7P1	1	1	-0.044581
chr3	170994870	170995033	170994951	ENSG00000199488.1	-	snRNA	KNOWN	RNU1-70P	1	1	-0.149826
chr3	170996348	171026750	171011549	ENSG00000163581.13	-	protein_coding	KNOWN	SLC2A2	5	11	-0.213175
chr3	171061339	171460408	171260873	ENSG00000154310.16	-	protein_coding	KNOWN	TNIK	15	33	-0.099764
chr3	171106664	171106759	171106711	ENSG00000207963.1	-	miRNA	KNOWN	MIR569	1	1	0.040461
chr3	171439526	171439627	171439576	ENSG00000222506.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.056368
chr3	171460612	171462256	171461434	ENSG00000279673.1	+	TEC	KNOWN	RP11-185E8.2	1	1	-0.144769
chr3	171468084	171469633	171468858	ENSG00000240497.2	+	lincRNA	KNOWN	RP11-185E8.1	1	2	-0.144769
chr3	171504245	171504351	171504298	ENSG00000207114.1	-	snRNA	KNOWN	RNU6-348P	1	1	0.253455
chr3	171534423	171534615	171534519	ENSG00000234594.1	+	processed_pseudogene	KNOWN	RP11-263C16.2	1	1	0.186114
chr3	171600405	171810950	171705677	ENSG00000075651.15	-	protein_coding	KNOWN	PLD1	17	27	-0.179646
chr3	171843349	171938715	171891032	ENSG00000186329.9	+	protein_coding	KNOWN	TMEM212	5	7	-0.124891
chr3	171876352	171900740	171888546	ENSG00000234717.1	-	lincRNA	KNOWN	TMEM212-AS1	1	3	-0.154147
chr3	171894436	171895240	171894838	ENSG00000235943.1	+	sense_intronic	KNOWN	TMEM212-IT1	1	2	-0.166470
chr3	171978374	171978518	171978446	ENSG00000281752.1	-	miRNA	NOVEL	AC055714.1	1	1	0.136846
chr3	172039628	172401665	172220646	ENSG00000075420.12	+	protein_coding	KNOWN	FNDC3B	12	26	0.004981
chr3	172225428	172225872	172225650	ENSG00000237483.1	-	processed_pseudogene	KNOWN	RP11-423E7.1	1	1	-0.103928
chr3	172237326	172237591	172237458	ENSG00000243398.3	+	misc_RNA	KNOWN	RN7SL141P	1	1	-0.059074
chr3	172301654	172303052	172302353	ENSG00000279862.1	-	TEC	KNOWN	RP11-423E7.2	1	1	0.138786
chr3	172425850	172427089	172426469	ENSG00000236686.1	-	processed_pseudogene	KNOWN	BZW1P1	1	1	0.019388
chr3	172445133	172448456	172446794	ENSG00000121853.3	-	protein_coding	KNOWN	GHSR	2	2	-0.430686
chr3	172505508	172523507	172514507	ENSG00000121858.10	-	protein_coding	KNOWN	TNFSF10	6	5	-0.232956
chr3	172522228	172522444	172522336	ENSG00000224611.1	+	processed_pseudogene	KNOWN	AC007919.18	1	1	-0.218650
chr3	172548493	172548628	172548560	ENSG00000280600.1	-	miRNA	NOVEL	AC007919.2	1	1	-0.109266
chr3	172560888	172595607	172578247	ENSG00000223387.6	-	lincRNA	KNOWN	RP11-408H1.3	3	4	-0.004658
chr3	172603440	172604006	172603723	ENSG00000224426.1	-	processed_pseudogene	KNOWN	SLC31A1P1	1	1	0.005483
chr3	172630249	172711218	172670733	ENSG00000144959.9	-	protein_coding	KNOWN	NCEH1	6	5	0.003316
chr3	172671559	172671639	172671599	ENSG00000264711.1	-	miRNA	NOVEL	AC007919.1	1	1	0.138786
chr3	172680714	172681224	172680969	ENSG00000231384.1	+	processed_pseudogene	KNOWN	AC007919.19	1	1	0.138786
chr3	172703124	172703225	172703174	ENSG00000252082.1	+	snRNA	KNOWN	RNU6-547P	1	1	0.003058
chr3	172750682	172821474	172786078	ENSG00000114346.13	+	protein_coding	KNOWN	ECT2	16	25	-0.404793
chr3	172771277	172771405	172771341	ENSG00000200355.1	-	snoRNA	NOVEL	SNORA72	1	1	-0.467880
chr3	172796429	172796558	172796493	ENSG00000201458.1	-	snRNA	KNOWN	RNU4-4P	1	1	-0.531445
chr3	172826192	172826261	172826226	ENSG00000280919.1	-	miRNA	NOVEL	AC108667.1	1	1	-0.832281
chr3	172828736	172829176	172828956	ENSG00000227440.1	-	processed_pseudogene	KNOWN	ATP5G1P4	1	1	-0.832281
chr3	172830981	172831229	172831105	ENSG00000237501.1	-	processed_pseudogene	KNOWN	RP11-816B4.1	1	1	-0.326413
chr3	172889358	173141268	173015313	ENSG00000144962.6	-	protein_coding	KNOWN	SPATA16	1	11	-0.670591
chr3	173153737	173336965	173245351	ENSG00000237473.1	+	lincRNA	KNOWN	RP11-324C10.1	1	5	-0.560388
chr3	173396284	174286644	173841464	ENSG00000169760.17	+	protein_coding	KNOWN	NLGN1	11	7	-0.459113
chr3	173644231	173644711	173644471	ENSG00000237645.1	+	processed_pseudogene	KNOWN	RP11-521A24.1	1	1	-0.624215
chr3	173910498	173920796	173915647	ENSG00000228213.5	-	antisense	KNOWN	NLGN1-AS1	2	4	-0.295031
chr3	174057641	174057864	174057752	ENSG00000252982.1	+	misc_RNA	KNOWN	RN7SKP234	1	1	-0.573891
chr3	174302944	174303287	174303115	ENSG00000232601.1	-	processed_pseudogene	KNOWN	RP11-393N4.1	1	1	-0.705021
chr3	174377244	174378005	174377624	ENSG00000213169.3	+	processed_pseudogene	KNOWN	RP11-393N4.2	1	1	-0.370742
chr3	174438573	175810552	175124562	ENSG00000177694.14	+	protein_coding	KNOWN	NAALADL2	13	14	-0.446472
chr3	174631823	174632064	174631943	ENSG00000253020.2	+	misc_RNA	KNOWN	RN7SKP40	1	1	-0.548221
chr3	175059361	175060031	175059696	ENSG00000230497.2	-	processed_pseudogene	KNOWN	EEF1B2P8	1	1	-0.634724
chr3	175079307	175115242	175097274	ENSG00000230292.5	-	processed_transcript	KNOWN	NAALADL2-AS3	2	4	-0.608088
chr3	175234861	175271096	175252978	ENSG00000226779.1	-	antisense	KNOWN	NAALADL2-AS2	1	3	-0.348153
chr3	175369540	175369621	175369580	ENSG00000264974.1	+	miRNA	KNOWN	MIR4789	1	1	0.000651
chr3	175397247	175397348	175397297	ENSG00000199792.1	-	snRNA	KNOWN	RNU6-1233P	1	1	-0.435520
chr3	175609479	175609613	175609546	ENSG00000201648.1	+	snRNA	KNOWN	RNU4-91P	1	1	-0.540276
chr3	175675087	175676801	175675944	ENSG00000236241.1	-	processed_pseudogene	KNOWN	RP11-744O11.2	1	1	-0.599886
chr3	175718231	175718670	175718450	ENSG00000214192.3	-	processed_pseudogene	KNOWN	UBE2V1P2	1	1	-0.372676
chr3	175767558	175767661	175767609	ENSG00000201452.1	+	snRNA	KNOWN	RNU6-1317P	1	1	-0.442345
chr3	175773145	175776333	175774739	ENSG00000225552.1	-	antisense	KNOWN	NAALADL2-AS1	1	3	-0.511707
chr3	175938929	175941037	175939983	ENSG00000260217.1	-	lincRNA	KNOWN	RP11-809F4.3	1	1	-0.642547
chr3	175977497	175978570	175978033	ENSG00000230362.1	-	processed_pseudogene	KNOWN	ACTG1P23	1	1	-0.444061
chr3	176068042	176068908	176068475	ENSG00000236357.1	-	processed_pseudogene	KNOWN	EI24P1	1	1	-0.819952
chr3	176069107	176069252	176069179	ENSG00000271413.1	+	processed_pseudogene	KNOWN	RP11-809F4.4	1	1	-0.819952
chr3	176113702	176114537	176114119	ENSG00000238026.1	-	processed_pseudogene	KNOWN	RP11-78E6.1	1	1	-0.675347
chr3	176604143	176635532	176619837	ENSG00000223715.1	-	lincRNA	KNOWN	LINC01208	2	3	-0.421256
chr3	176643941	176867838	176755889	ENSG00000232461.1	-	lincRNA	KNOWN	RP11-644C3.1	1	5	-0.511606
chr3	176763233	176763341	176763287	ENSG00000252302.1	+	rRNA	KNOWN	RNA5SP147	1	1	-0.812660
chr3	176814155	176817001	176815578	ENSG00000228308.1	-	lincRNA	KNOWN	LINC01209	1	2	-0.292438
chr3	177010719	177011067	177010893	ENSG00000231888.1	-	processed_pseudogene	KNOWN	MTND5P15	1	1	-0.072544
chr3	177019355	177197396	177108375	ENSG00000177565.15	-	protein_coding	KNOWN	TBL1XR1	22	16	-0.108214
chr3	177037405	177047923	177042664	ENSG00000231310.3	+	antisense	KNOWN	TBL1XR1-AS1	2	4	-0.215676
chr3	177120691	177120800	177120745	ENSG00000201343.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.074258
chr3	177126017	177126120	177126068	ENSG00000200882.1	-	snRNA	KNOWN	RNU6-681P	1	1	-0.074258
chr3	177294442	177323418	177308930	ENSG00000203645.2	+	lincRNA	KNOWN	LINC00501	1	2	0.123303
chr3	177297161	177298386	177297773	ENSG00000236893.1	-	processed_pseudogene	KNOWN	ASS1P7	1	1	0.204258
chr3	177337628	177349166	177343397	ENSG00000226782.2	-	lincRNA	KNOWN	RP11-706D8.3	1	3	-0.078941
chr3	177441921	177752305	177597113	ENSG00000228221.5	+	lincRNA	KNOWN	LINC00578	4	4	-0.033274
chr3	177503303	177503552	177503427	ENSG00000252028.1	-	misc_RNA	KNOWN	RN7SKP52	1	1	-0.376395
chr3	177621382	177628287	177624834	ENSG00000236385.1	-	lincRNA	KNOWN	RP11-114M1.2	1	3	0.129960
chr3	177624282	177624409	177624345	ENSG00000200288.1	-	snoRNA	NOVEL	SNORA18	1	1	0.129960
chr3	177683627	177691250	177687438	ENSG00000228561.2	+	lincRNA	KNOWN	RP11-114M1.1	1	4	-0.190058
chr3	177700346	177701072	177700709	ENSG00000277241.1	-	processed_pseudogene	KNOWN	RP11-114M1.3	1	1	-0.295031
chr3	177816865	177899224	177858044	ENSG00000231574.5	+	lincRNA	KNOWN	KCCAT211	2	3	-0.217138
chr3	177934823	177937662	177936242	ENSG00000225790.1	+	lincRNA	KNOWN	RP11-2L8.1	1	3	-0.430574
chr3	177954066	177959798	177956932	ENSG00000270321.1	-	lincRNA	KNOWN	RP11-2L8.2	1	2	-0.435940
chr3	178007672	178007779	178007725	ENSG00000199858.1	-	snRNA	KNOWN	RNU6-1120P	1	1	0.054272
chr3	178202050	178385417	178293733	ENSG00000223930.5	-	lincRNA	KNOWN	RP11-33A14.1	5	4	-0.316785
chr3	178272932	178844429	178558680	ENSG00000197584.11	+	protein_coding	KNOWN	KCNMB2	10	6	-0.498959
chr3	178419123	178843300	178631211	ENSG00000275163.1	+	protein_coding	KNOWN	RP11-385J1.3	1	5	-0.536163
chr3	178419201	178457309	178438255	ENSG00000223941.5	+	sense_intronic	KNOWN	LINC01014	3	3	-0.673731
chr3	178429197	178429290	178429243	ENSG00000252336.1	-	rRNA	KNOWN	RNA5SP148	1	1	-0.589647
chr3	178493327	178493810	178493568	ENSG00000271131.1	-	processed_pseudogene	KNOWN	RP11-33A14.3	1	1	-0.130401
chr3	178526505	178860405	178693455	ENSG00000237978.5	-	antisense	KNOWN	KCNMB2-AS1	5	8	-0.560333
chr3	179017223	179072279	179044751	ENSG00000172667.10	-	protein_coding	KNOWN	ZMAT3	3	7	0.039659
chr3	179097731	179097840	179097785	ENSG00000200616.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.082506
chr3	179101366	179147973	179124669	ENSG00000229102.1	-	lincRNA	KNOWN	RP11-360P21.2	1	3	-0.423617
chr3	179148114	179240093	179194103	ENSG00000121879.3	+	protein_coding	KNOWN	PIK3CA	4	21	-0.306947
chr3	179169083	179169210	179169146	ENSG00000201957.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.055854
chr3	179236691	179267002	179251846	ENSG00000171121.16	-	protein_coding	KNOWN	KCNMB3	7	5	-0.294480
chr3	179259028	179261273	179260150	ENSG00000240429.1	-	processed_pseudogene	KNOWN	LRRFIP1P1	1	1	0.046763
chr3	179322991	179338583	179330787	ENSG00000121864.9	+	protein_coding	KNOWN	ZNF639	10	7	-0.001569
chr3	179340322	179341887	179341104	ENSG00000260743.1	+	lincRNA	KNOWN	RP11-255C15.3	1	1	0.174454
chr3	179347692	179394931	179371311	ENSG00000171109.18	+	protein_coding	KNOWN	MFN1	9	18	-0.182540
chr3	179396089	179451590	179423839	ENSG00000114450.9	-	protein_coding	KNOWN	GNB4	5	10	-0.178814
chr3	179396961	179399191	179398076	ENSG00000242539.2	+	antisense	KNOWN	AC007620.3	3	2	-0.345072
chr3	179405448	179405944	179405696	ENSG00000272699.1	+	antisense	KNOWN	RP11-145M9.5	1	1	-0.345072
chr3	179452395	179452419	179452407	ENSG00000239255.1	-	processed_pseudogene	KNOWN	RP11-145M9.2	1	1	-0.367440
chr3	179464346	179465328	179464837	ENSG00000181260.8	+	processed_pseudogene	KNOWN	MTHFD2P7	1	1	-0.367440
chr3	179562880	179588408	179575644	ENSG00000136518.16	+	protein_coding	KNOWN	ACTL6A	14	14	-0.098409
chr3	179583262	179583762	179583512	ENSG00000272910.1	-	antisense	KNOWN	RP11-15L13.4	1	1	-0.150579
chr3	179584271	179584410	179584340	ENSG00000272660.1	-	antisense	KNOWN	RP11-145M9.6	1	1	-0.150579
chr3	179588285	179604654	179596469	ENSG00000136522.13	-	protein_coding	KNOWN	MRPL47	3	7	-0.365073
chr3	179604690	179627647	179616168	ENSG00000136521.12	+	protein_coding	KNOWN	NDUFB5	16	7	-0.089849
chr3	179614775	179614878	179614826	ENSG00000239096.1	-	snoRNA	NOVEL	snoU13	1	1	0.000493
chr3	179649494	179650200	179649847	ENSG00000243977.1	-	processed_pseudogene	KNOWN	RP11-473P24.2	1	1	-0.099807
chr3	179652755	179789401	179721078	ENSG00000058056.8	+	protein_coding	KNOWN	USP13	5	21	-0.031304
chr3	179794958	180037053	179916005	ENSG00000114757.18	-	protein_coding	KNOWN	PEX5L	18	15	-0.423909
chr3	179804063	179804366	179804214	ENSG00000270178.1	+	lincRNA	KNOWN	RP11-494H4.3	1	1	-0.215332
chr3	179875376	179881609	179878492	ENSG00000243799.1	+	antisense	KNOWN	PEX5L-AS1	1	2	-0.704475
chr3	179898229	179921895	179910062	ENSG00000244302.1	+	antisense	KNOWN	PEX5L-AS2	1	3	-0.338276
chr3	180161886	180161977	180161931	ENSG00000201822.1	-	rRNA	KNOWN	RNA5SP149	1	1	-0.492971
chr3	180201159	180201212	180201185	ENSG00000282327.1	+	processed_pseudogene	KNOWN	RP11-657G5.2	1	1	-0.098339
chr3	180212191	180213108	180212649	ENSG00000213158.6	+	processed_pseudogene	KNOWN	GAPDHP36	1	1	-0.480371
chr3	180323107	180325059	180324083	ENSG00000239880.1	+	processed_pseudogene	KNOWN	RP11-420J11.1	1	1	-0.414544
chr3	180414174	180422506	180418340	ENSG00000241696.1	+	lincRNA	KNOWN	RP11-420J11.2	2	2	-0.270578
chr3	180542701	180542836	180542768	ENSG00000201810.1	+	snoRNA	NOVEL	U8	1	1	-0.365357
chr3	180566718	180601935	180584326	ENSG00000239774.1	-	lincRNA	KNOWN	RP11-496B10.3	1	3	-0.186372
chr3	180581057	180581163	180581110	ENSG00000199986.1	+	snRNA	KNOWN	RNU6-486P	1	1	-0.149016
chr3	180589887	180590047	180589967	ENSG00000241946.1	-	processed_pseudogene	KNOWN	RP11-496B10.1	1	1	-0.191917
chr3	180602130	180617828	180609979	ENSG00000163728.10	+	protein_coding	KNOWN	TTC14	11	13	-0.124488
chr3	180602858	180871005	180736931	ENSG00000145075.11	-	protein_coding	KNOWN	CCDC39	7	25	-0.521380
chr3	180680084	180700449	180690266	ENSG00000243187.1	+	antisense	KNOWN	CCDC39-AS1	1	2	-0.510754
chr3	180736405	180736703	180736554	ENSG00000242811.3	-	misc_RNA	KNOWN	RN7SL229P	1	1	-0.601347
chr3	180772750	180773914	180773332	ENSG00000242068.1	-	processed_pseudogene	KNOWN	RP11-259P15.4	1	1	-0.510044
chr3	180820544	180821612	180821078	ENSG00000241473.1	+	processed_pseudogene	KNOWN	RP11-259P15.3	1	1	-0.537640
chr3	180827977	180829850	180828913	ENSG00000239516.1	-	processed_pseudogene	KNOWN	FLYWCH1P1	1	1	-0.537640
chr3	180868141	180982753	180925447	ENSG00000114416.17	+	protein_coding	KNOWN	FXR1	22	18	-0.383205
chr3	180887677	180888075	180887876	ENSG00000213157.3	-	processed_pseudogene	KNOWN	RP11-259P15.1	1	1	-0.360520
chr3	180983709	180989774	180986741	ENSG00000205981.6	-	protein_coding	KNOWN	DNAJC19	9	6	-0.708699
chr3	180989770	181836880	181413325	ENSG00000242808.7	+	sense_overlapping	KNOWN	SOX2-OT	59	8	-0.513129
chr3	181146233	181146463	181146348	ENSG00000242140.1	+	processed_pseudogene	KNOWN	RP11-262M14.2	1	1	-0.786702
chr3	181231737	181231843	181231790	ENSG00000206932.1	+	snRNA	KNOWN	RNU6-4P	1	1	-0.769032
chr3	181242345	181242901	181242623	ENSG00000237806.1	-	processed_pseudogene	KNOWN	FAUP2	1	2	-0.769032
chr3	181421058	181442486	181431772	ENSG00000241231.1	-	lincRNA	KNOWN	RP11-275H4.1	1	5	-0.478613
chr3	181505075	181505879	181505477	ENSG00000235294.1	-	processed_pseudogene	KNOWN	RPL7AP25	1	1	-0.717402
chr3	181534177	181535881	181535029	ENSG00000239381.5	-	lincRNA	KNOWN	RP11-4B14.3	3	3	-0.642197
chr3	181610498	181610729	181610613	ENSG00000276074.1	+	misc_RNA	NOVEL	SOX2OT_exon1	1	1	-0.352793
chr3	181699608	181699883	181699745	ENSG00000276690.1	+	misc_RNA	NOVEL	SOX2OT_exon3	1	1	-0.298798
chr3	181699705	181699783	181699744	ENSG00000281596.1	+	miRNA	NOVEL	AC117415.1	1	1	-0.298798
chr3	181711924	181714436	181713180	ENSG00000181449.3	+	protein_coding	KNOWN	SOX2	1	1	-0.223104
chr3	181715185	181715293	181715239	ENSG00000278026.1	+	misc_RNA	NOVEL	SOX2OT_exon4	1	1	-0.223104
chr3	181813401	181813702	181813551	ENSG00000266317.2	+	misc_RNA	KNOWN	RN7SL703P	1	1	-0.048871
chr3	181822872	181822990	181822931	ENSG00000199839.1	-	rRNA	KNOWN	RNA5SP150	1	1	-0.048871
chr3	181847526	181847885	181847705	ENSG00000239805.1	-	processed_pseudogene	KNOWN	RP11-252O18.2	1	1	-0.456134
chr3	181866351	181867154	181866752	ENSG00000213155.4	-	processed_pseudogene	KNOWN	RP11-252O18.3	1	2	-0.282404
chr3	181952343	182010678	181981510	ENSG00000242512.8	+	lincRNA	KNOWN	LINC01206	37	8	-0.513457
chr3	181968459	181968681	181968570	ENSG00000252257.1	+	misc_RNA	KNOWN	RN7SKP265	1	1	-0.325861
chr3	182121884	182142137	182132010	ENSG00000240478.1	+	lincRNA	KNOWN	RP11-416O18.2	1	2	-0.471893
chr3	182365147	182368256	182366701	ENSG00000242012.1	+	lincRNA	KNOWN	RP11-338L18.1	1	2	-0.212342
chr3	182446970	182486364	182466667	ENSG00000241098.1	-	lincRNA	KNOWN	FLJ46066	1	4	-0.392097
chr3	182460417	182461072	182460744	ENSG00000244199.1	-	processed_pseudogene	KNOWN	EIF4EP3	1	1	-0.583169
chr3	182498264	182507124	182502694	ENSG00000244247.1	-	lincRNA	KNOWN	RP11-139K4.2	1	4	-0.672719
chr3	182610674	182611414	182611044	ENSG00000228766.3	+	processed_pseudogene	KNOWN	RPL7L1P8	1	1	-0.697170
chr3	182644214	182655880	182650047	ENSG00000238837.3	+	lincRNA	KNOWN	RP11-646E18.2	1	5	-0.337003
chr3	182691928	182692285	182692106	ENSG00000243378.1	+	processed_pseudogene	KNOWN	RP11-646E18.3	1	1	-0.305344
chr3	182739669	182740848	182740258	ENSG00000260377.1	-	lincRNA	KNOWN	RP11-646E18.4	1	1	0.083954
chr3	182783236	182793394	182788315	ENSG00000240063.1	-	antisense	KNOWN	RP11-225N10.1	1	2	-0.126210
chr3	182793500	182921635	182857567	ENSG00000058063.15	+	protein_coding	KNOWN	ATP11B	10	30	-0.183689
chr3	182843521	182844619	182844070	ENSG00000270554.1	-	processed_pseudogene	KNOWN	RP11-225N10.3	1	1	-0.439621
chr3	182921240	182921938	182921589	ENSG00000273261.1	-	antisense	KNOWN	RP11-531F16.4	1	1	0.054517
chr3	182938074	182985953	182962013	ENSG00000043093.13	-	protein_coding	KNOWN	DCUN1D1	8	7	-0.004199
chr3	182950783	182956307	182953545	ENSG00000244346.1	-	processed_pseudogene	KNOWN	RP11-531F16.3	1	4	-0.077933
chr3	183015218	183116075	183065646	ENSG00000078070.11	-	protein_coding	KNOWN	MCCC1	16	19	0.056379
chr3	183016255	183017808	183017031	ENSG00000243368.2	+	antisense	KNOWN	MCCC1-AS1	1	2	0.121893
chr3	183122213	183163839	183143026	ENSG00000078081.7	-	protein_coding	KNOWN	LAMP3	5	6	-0.084965
chr3	183178043	183428778	183303410	ENSG00000053524.11	-	protein_coding	KNOWN	MCF2L2	13	30	-0.042263
chr3	183253244	183298504	183275874	ENSG00000176597.11	+	protein_coding	KNOWN	B3GNT5	12	3	-0.015975
chr3	183258300	183258416	183258358	ENSG00000202502.1	-	rRNA	KNOWN	RNA5SP151	1	1	0.140627
chr3	183447608	183456013	183451810	ENSG00000240024.5	+	transcribed_unprocessed_pseudogene	KNOWN	LINC00888	4	4	0.002089
chr3	183451857	183451988	183451922	ENSG00000201229.1	+	snoRNA	NOVEL	SNORA63	1	1	0.056368
chr3	183452567	183452764	183452665	ENSG00000253092.1	+	snoRNA	NOVEL	SNORA81	1	1	0.056368
chr3	183453814	183453944	183453879	ENSG00000199363.1	+	snoRNA	NOVEL	SNORA63	1	1	0.056368
chr3	183454128	183454262	183454195	ENSG00000251730.1	+	snoRNA	NOVEL	SNORA4	1	1	0.056368
chr3	183462851	183463201	183463026	ENSG00000271682.1	-	processed_pseudogene	KNOWN	RP11-393B14.2	1	1	0.056368
chr3	183487531	183555689	183521610	ENSG00000172578.11	-	protein_coding	KNOWN	KLHL6	4	8	0.281968
chr3	183548735	183552326	183550530	ENSG00000242522.1	+	antisense	KNOWN	KLHL6-AS1	1	2	0.251446
chr3	183613620	183616742	183615181	ENSG00000243584.1	+	processed_pseudogene	KNOWN	RP11-14I2.2	1	3	0.325664
chr3	183635568	183684477	183660022	ENSG00000114796.15	+	protein_coding	KNOWN	KLHL24	15	9	0.126935
chr3	183697818	183812625	183755221	ENSG00000163872.15	+	protein_coding	KNOWN	YEATS2	6	31	0.335176
chr3	183802475	183802553	183802514	ENSG00000216166.1	-	miRNA	NOVEL	AC131160.1	1	1	0.261917
chr3	183806156	183806204	183806180	ENSG00000276325.1	+	miRNA	NOVEL	AC131160.2	1	1	0.261917
chr3	183806457	183810783	183808620	ENSG00000233885.7	-	antisense	KNOWN	YEATS2-AS1	4	3	0.307820
chr3	183815876	183825594	183820735	ENSG00000180834.7	-	protein_coding	KNOWN	MAP6D1	4	3	0.515203
chr3	183829385	183884933	183857159	ENSG00000175193.12	-	protein_coding	KNOWN	PARL	10	10	0.440750
chr3	183884924	183888449	183886686	ENSG00000234371.6	+	transcribed_processed_pseudogene	KNOWN	RPSAP31	2	2	0.395238
chr3	183886800	183886885	183886842	ENSG00000263932.1	+	miRNA	KNOWN	MIR4448	1	1	0.395238
chr3	183895900	183910936	183903418	ENSG00000233441.6	-	transcribed_unprocessed_pseudogene	KNOWN	CYP2AB1P	2	9	0.440251
chr3	183919934	184018015	183968974	ENSG00000114770.16	-	protein_coding	KNOWN	ABCC5	13	30	0.463867
chr3	184006338	184011419	184008878	ENSG00000223882.1	+	antisense	KNOWN	ABCC5-AS1	1	3	0.118187
chr3	184026369	184027756	184027062	ENSG00000223529.1	-	processed_pseudogene	KNOWN	EEF1A1P8	1	1	0.404582
chr3	184031544	184039369	184035456	ENSG00000186090.10	+	protein_coding	KNOWN	HTR3D	4	8	0.459109
chr3	184053047	184060671	184056859	ENSG00000178084.1	+	protein_coding	KNOWN	HTR3C	1	9	0.327523
chr3	184076779	184084219	184080499	ENSG00000233576.1	+	unprocessed_pseudogene	KNOWN	RP11-778D9.9	1	9	0.290537
chr3	184086791	184086903	184086847	ENSG00000207351.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.290537
chr3	184095118	184105178	184100148	ENSG00000238020.1	-	antisense	KNOWN	HTR3E-AS1	1	3	0.540007
chr3	184097064	184106995	184102029	ENSG00000186038.9	+	protein_coding	KNOWN	HTR3E	6	9	0.540007
chr3	184115352	184117898	184116625	ENSG00000205955.4	+	transcribed_processed_pseudogene	KNOWN	HSP90AA5P	1	2	0.591563
chr3	184132942	184133561	184133251	ENSG00000273181.1	-	lincRNA	KNOWN	RP11-778D9.13	1	1	0.476815
chr3	184134019	184135238	184134628	ENSG00000272721.5	-	antisense	KNOWN	RP11-778D9.12	2	3	0.476815
chr3	184135038	184684758	184409898	ENSG00000145191.11	+	protein_coding	KNOWN	EIF2B5	17	16	0.802484
chr3	184149704	184150435	184150069	ENSG00000228205.1	+	processed_pseudogene	KNOWN	RP11-778D9.4	1	1	0.714417
chr3	184155388	184173610	184164499	ENSG00000161202.17	+	protein_coding	KNOWN	DVL3	8	15	0.943354
chr3	184174689	184184091	184179390	ENSG00000161203.13	+	protein_coding	KNOWN	AP2M1	22	14	1.219201
chr3	184186023	184194012	184190017	ENSG00000161204.11	+	protein_coding	KNOWN	ABCF3	18	21	1.037723
chr3	184230429	184242329	184236379	ENSG00000145198.14	+	protein_coding	KNOWN	VWA5B2	6	19	1.052821
chr3	184241405	184241489	184241447	ENSG00000221120.1	+	miRNA	KNOWN	MIR1224	1	1	1.052821
chr3	184242301	184249548	184245924	ENSG00000214160.9	-	protein_coding	KNOWN	ALG3	14	9	1.052821
chr3	184249650	184293031	184271340	ENSG00000145194.17	+	protein_coding	KNOWN	ECE2	11	19	0.916295
chr3	184259213	184261463	184260338	ENSG00000163888.3	-	protein_coding	KNOWN	CAMK2N2	1	2	0.873646
chr3	184298709	184309054	184303881	ENSG00000175166.16	+	protein_coding	KNOWN	PSMD2	20	21	1.143831
chr3	184314495	184335358	184324926	ENSG00000114867.19	+	protein_coding	KNOWN	EIF4G1	39	38	1.109840
chr3	184325696	184325771	184325733	ENSG00000212158.1	+	snoRNA	KNOWN	SNORD66	1	1	1.062505
chr3	184335926	184346275	184341100	ENSG00000175182.13	+	protein_coding	KNOWN	FAM131A	10	7	1.246782
chr3	184346185	184361651	184353918	ENSG00000114859.14	-	protein_coding	KNOWN	CLCN2	9	24	1.103544
chr3	184361718	184368596	184365157	ENSG00000163882.9	+	protein_coding	KNOWN	POLR2H	13	6	1.056659
chr3	184371935	184378144	184375039	ENSG00000090534.17	-	protein_coding	KNOWN	THPO	4	6	0.704388
chr3	184380073	184390736	184385404	ENSG00000090539.15	+	protein_coding	KNOWN	CHRD	17	24	0.720746
chr3	184401537	184439648	184420592	ENSG00000224153.2	+	lincRNA	KNOWN	RP11-433C9.2	2	3	0.646944
chr3	184505113	184508399	184506756	ENSG00000227509.1	+	sense_intronic	KNOWN	EIF2B5-IT1	1	2	0.755871
chr3	184546714	184556918	184551816	ENSG00000230215.1	-	antisense	KNOWN	EIF2B5-AS1	1	2	0.667254
chr3	184561784	184582409	184572096	ENSG00000182580.2	+	protein_coding	KNOWN	EPHB3	3	16	0.909970
chr3	184710367	184712002	184711184	ENSG00000177383.4	-	protein_coding	KNOWN	MAGEF1	1	1	0.572882
chr3	184734075	184738949	184736512	ENSG00000272970.1	+	lincRNA	KNOWN	RP11-329B9.4	1	3	0.542469
chr3	184741937	184742462	184742199	ENSG00000273403.1	+	lincRNA	KNOWN	RP11-329B9.3	1	1	0.542469
chr3	184742818	184743284	184743051	ENSG00000272922.1	+	lincRNA	KNOWN	RP11-329B9.5	1	1	0.542469
chr3	184756389	184773155	184764772	ENSG00000229433.1	-	lincRNA	KNOWN	RP11-329B9.1	1	3	0.725647
chr3	184812143	185052614	184932378	ENSG00000156931.15	+	protein_coding	KNOWN	VPS8	28	48	-0.025240
chr3	185078050	185153014	185115532	ENSG00000187068.2	-	protein_coding	KNOWN	C3orf70	1	2	-0.097111
chr3	185162871	185191955	185177413	ENSG00000223358.5	+	antisense	KNOWN	EHHADH-AS1	2	7	0.154871
chr3	185190624	185281990	185236307	ENSG00000113790.10	-	protein_coding	KNOWN	EHHADH	6	7	-0.095181
chr3	185245460	185246441	185245950	ENSG00000229704.1	-	processed_pseudogene	KNOWN	EIF2S2P2	1	1	-0.290624
chr3	185253210	185253272	185253241	ENSG00000264614.1	-	miRNA	KNOWN	MIR5588	1	1	0.206762
chr3	185282941	185489097	185386019	ENSG00000073803.13	+	protein_coding	KNOWN	MAP3K13	15	15	-0.042895
chr3	185417495	185418778	185418136	ENSG00000229638.1	-	processed_pseudogene	KNOWN	RPL4P4	1	1	-0.048669
chr3	185476496	185499057	185487776	ENSG00000163900.10	-	protein_coding	KNOWN	TMEM41A	7	6	0.230202
chr3	185506262	185552613	185529437	ENSG00000163898.9	-	protein_coding	KNOWN	LIPH	5	10	0.125624
chr3	185582496	185633551	185608023	ENSG00000163904.12	+	protein_coding	KNOWN	SENP2	13	17	0.112760
chr3	185606575	185606873	185606724	ENSG00000236489.1	+	processed_pseudogene	KNOWN	RP11-537I16.2	1	1	0.101707
chr3	185643739	185825056	185734397	ENSG00000073792.15	-	protein_coding	KNOWN	IGF2BP2	11	16	0.251815
chr3	185712528	185729787	185721157	ENSG00000163915.7	+	antisense	KNOWN	IGF2BP2-AS1	5	8	0.385937
chr3	185767847	185767904	185767875	ENSG00000265470.1	-	miRNA	KNOWN	MIR548AQ	1	1	0.224299
chr3	185915906	185938136	185927021	ENSG00000136527.17	-	protein_coding	KNOWN	TRA2B	16	10	0.289788
chr3	185959943	185980872	185970407	ENSG00000171658.8	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-443P15.2	7	5	0.024669
chr3	186046308	186110318	186078313	ENSG00000244405.7	-	protein_coding	KNOWN	ETV5	14	13	-0.033928
chr3	186076306	186076591	186076448	ENSG00000277118.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.174182
chr3	186079170	186080947	186080058	ENSG00000234197.1	+	antisense	KNOWN	ETV5-AS1	1	2	-0.174182
chr3	186105668	186362237	186233952	ENSG00000058866.14	-	protein_coding	KNOWN	DGKG	11	25	-0.003087
chr3	186440345	186450696	186445520	ENSG00000234548.5	+	lincRNA	KNOWN	RP11-78H24.1	4	4	-0.190356
chr3	186454982	186493661	186474321	ENSG00000224406.5	-	lincRNA	KNOWN	RP11-48F14.1	4	8	-0.220786
chr3	186476727	186478370	186477548	ENSG00000226859.1	+	lincRNA	KNOWN	RP11-48F14.2	1	2	-0.082613
chr3	186538441	186546702	186542571	ENSG00000213139.7	-	protein_coding	KNOWN	CRYGS	3	4	-0.158552
chr3	186546073	186570543	186558308	ENSG00000113838.12	-	protein_coding	KNOWN	TBCCD1	6	8	-0.216754
chr3	186567403	186597203	186582303	ENSG00000090520.10	+	protein_coding	KNOWN	DNAJB11	6	11	0.108515
chr3	186579476	186772986	186676231	ENSG00000197099.8	-	antisense	KNOWN	RP11-573D15.8	55	8	-0.122038
chr3	186612923	186621318	186617120	ENSG00000145192.12	+	protein_coding	KNOWN	AHSG	3	7	-0.093120
chr3	186629936	186630211	186630073	ENSG00000275696.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.197175
chr3	186635969	186653141	186644555	ENSG00000090512.11	+	protein_coding	KNOWN	FETUB	8	8	-0.274808
chr3	186660216	186678240	186669228	ENSG00000113905.4	+	protein_coding	KNOWN	HRG	3	7	-0.422997
chr3	186687329	186692506	186689917	ENSG00000225175.1	+	unprocessed_pseudogene	KNOWN	RP11-795A2.2	1	4	-0.215388
chr3	186698520	186708574	186703547	ENSG00000226724.1	+	unprocessed_pseudogene	KNOWN	RP11-795A2.3	1	6	-0.070628
chr3	186717276	186743954	186730615	ENSG00000113889.11	+	protein_coding	KNOWN	KNG1	3	11	-0.042596
chr3	186760693	186762050	186761371	ENSG00000226652.3	+	transcribed_processed_pseudogene	KNOWN	PSMD10P2	3	3	0.196689
chr3	186771841	186771947	186771894	ENSG00000207505.1	-	snRNA	KNOWN	RNU6-1105P	1	1	-0.184020
chr3	186772589	186773476	186773032	ENSG00000230951.1	+	processed_pseudogene	KNOWN	GPS2P2	1	1	-0.184020
chr3	186781780	186784179	186782979	ENSG00000263826.1	-	antisense	KNOWN	RP11-573D15.9	1	1	-0.184020
chr3	186783205	186789900	186786552	ENSG00000156976.14	+	protein_coding	KNOWN	EIF4A2	27	12	-0.184020
chr3	186784796	186784864	186784830	ENSG00000238942.1	+	snoRNA	KNOWN	SNORD2	1	1	-0.184020
chr3	186786323	186786445	186786384	ENSG00000200418.1	+	snoRNA	NOVEL	SNORA63	1	1	-0.184020
chr3	186786672	186786777	186786724	ENSG00000281017.1	+	miRNA	KNOWN	MIR1248	1	1	-0.184020
chr3	186786675	186786852	186786763	ENSG00000221420.2	+	snoRNA	KNOWN	SNORA81	1	1	-0.184020
chr3	186787300	186787431	186787365	ENSG00000200320.1	+	snoRNA	KNOWN	SNORA63	1	1	-0.184020
chr3	186787612	186787749	186787680	ENSG00000263776.1	+	snoRNA	KNOWN	SNORA4	1	1	-0.184020
chr3	186789880	186807058	186798469	ENSG00000163918.10	-	protein_coding	KNOWN	RFC4	14	11	0.413808
chr3	186807692	186818121	186812906	ENSG00000231724.1	+	antisense	KNOWN	RP11-573D15.3	1	2	0.220137
chr3	186810880	186825521	186818200	ENSG00000232233.1	-	lincRNA	KNOWN	RP11-573D15.2	1	4	0.163942
chr3	186826549	186827337	186826943	ENSG00000231982.1	+	unprocessed_pseudogene	KNOWN	RP11-573D15.1	1	3	0.163942
chr3	186842690	186858463	186850576	ENSG00000181092.9	+	protein_coding	KNOWN	ADIPOQ	2	4	0.020795
chr3	186851886	186856123	186854004	ENSG00000226482.1	-	antisense	KNOWN	ADIPOQ-AS1	1	3	0.000844
chr3	186900198	186900557	186900377	ENSG00000223803.1	+	processed_pseudogene	KNOWN	RPS20P14	1	1	0.154728
chr3	186922286	186922753	186922519	ENSG00000233565.1	-	processed_pseudogene	KNOWN	RP11-42D20.1	1	1	-0.137209
chr3	186930485	187078553	187004519	ENSG00000073849.14	+	protein_coding	KNOWN	ST6GAL1	22	8	0.070449
chr3	187120948	187180908	187150928	ENSG00000163923.9	-	protein_coding	KNOWN	RPL39L	3	4	0.026907
chr3	187197090	187207629	187202359	ENSG00000198491.3	-	antisense	KNOWN	RP11-208N14.4	1	5	0.091992
chr3	187197486	187201465	187199475	ENSG00000175077.5	+	protein_coding	KNOWN	RTP1	1	2	0.091992
chr3	187217285	187292022	187254653	ENSG00000127241.16	-	protein_coding	KNOWN	MASP1	15	16	0.292926
chr3	187368332	187372076	187370204	ENSG00000136514.2	+	protein_coding	KNOWN	RTP4	1	2	-0.041906
chr3	187383101	187384849	187383975	ENSG00000280270.1	+	TEC	KNOWN	RP11-560F18.1	1	1	0.209229
chr3	187423315	187423419	187423367	ENSG00000239093.1	+	snoRNA	NOVEL	snoU13	1	1	-0.473288
chr3	187448845	187449450	187449147	ENSG00000228952.1	+	lincRNA	KNOWN	RP11-567G11.1	1	2	-0.272883
chr3	187668906	187670399	187669652	ENSG00000157005.3	-	protein_coding	KNOWN	SST	1	2	-0.012539
chr3	187698259	187702557	187700408	ENSG00000198471.1	-	protein_coding	KNOWN	RTP2	1	2	-0.098692
chr3	187702313	187733849	187718081	ENSG00000228804.5	+	antisense	KNOWN	RP11-211G3.3	2	3	-0.054978
chr3	187721377	187745727	187733552	ENSG00000113916.17	-	protein_coding	KNOWN	BCL6	11	10	0.019043
chr3	187743686	187745420	187744553	ENSG00000223401.1	+	lincRNA	KNOWN	RP11-211G3.2	1	2	0.062845
chr3	187796187	187805258	187800722	ENSG00000224049.1	+	lincRNA	KNOWN	RP11-30O15.1	2	3	-0.224192
chr3	187932764	187946221	187939492	ENSG00000236864.1	-	lincRNA	KNOWN	RP11-44H4.1	1	2	0.333698
chr3	187958775	187976407	187967591	ENSG00000224187.1	-	lincRNA	KNOWN	RP11-132N15.3	2	2	-0.056667
chr3	187997422	188003990	188000706	ENSG00000225058.1	-	lincRNA	KNOWN	RP11-132N15.1	1	2	0.228808
chr3	188001700	188003406	188002553	ENSG00000236412.1	-	lincRNA	KNOWN	RP11-132N15.2	1	2	0.228808
chr3	188107096	188147020	188127058	ENSG00000234238.1	+	lincRNA	KNOWN	RP11-430L16.1	1	2	0.076587
chr3	188151206	188154057	188152631	ENSG00000270959.1	-	antisense	KNOWN	LPP-AS2	1	1	0.267842
chr3	188153284	188890671	188521977	ENSG00000145012.12	+	protein_coding	KNOWN	LPP	21	11	-0.052300
chr3	188178543	188180812	188179677	ENSG00000279891.1	+	TEC	KNOWN	FLJ42393	1	1	0.061935
chr3	188236130	188236238	188236184	ENSG00000276242.1	-	miRNA	NOVEL	AC117507.1	1	1	0.061618
chr3	188562238	188568666	188565452	ENSG00000224563.1	-	antisense	KNOWN	LPP-AS1	1	2	-0.115949
chr3	188630641	188630702	188630671	ENSG00000264114.1	-	miRNA	NOVEL	AC063932.1	1	1	0.073376
chr3	188688781	188688866	188688823	ENSG00000207651.1	+	miRNA	KNOWN	MIR28	1	1	-0.200562
chr3	188941715	188947639	188944677	ENSG00000234076.1	-	lincRNA	KNOWN	TPRG1-AS1	1	2	-0.153374
chr3	188947214	189325304	189136259	ENSG00000188001.9	+	protein_coding	KNOWN	TPRG1	15	11	-0.459755
chr3	188989382	188990135	188989758	ENSG00000236182.1	-	processed_pseudogene	KNOWN	RP11-297K7.1	1	1	-0.165977
chr3	189238686	189240594	189239640	ENSG00000230115.1	-	antisense	KNOWN	TPRG1-AS2	1	3	-0.546334
chr3	189631416	189897279	189764347	ENSG00000073282.12	+	protein_coding	KNOWN	TP63	14	14	-0.642437
chr3	189645327	189645466	189645396	ENSG00000227971.1	-	processed_pseudogene	KNOWN	RP11-600G3.1	1	1	-0.680202
chr3	189829922	189830009	189829965	ENSG00000216058.1	+	miRNA	KNOWN	MIR944	1	1	-0.581147
chr3	189956728	190122437	190039582	ENSG00000090530.9	-	protein_coding	KNOWN	P3H2	10	15	-0.249727
chr3	189969030	189969861	189969445	ENSG00000230077.1	-	processed_pseudogene	KNOWN	MTAPP2	1	1	-0.444762
chr3	190120964	190144846	190132905	ENSG00000225764.1	+	antisense	KNOWN	P3H2-AS1	1	4	0.085678
chr3	190143656	190143743	190143699	ENSG00000252733.1	+	miRNA	NOVEL	AC067718.1	1	1	-0.039253
chr3	190165417	190165523	190165470	ENSG00000212489.1	-	snRNA	KNOWN	RNU6-1109P	1	1	-0.218030
chr3	190166764	190167651	190167207	ENSG00000238077.1	+	processed_pseudogene	KNOWN	NMNAT1P3	1	1	-0.218030
chr3	190305701	190322475	190314088	ENSG00000163347.5	-	protein_coding	KNOWN	CLDN1	2	4	-0.803620
chr3	190322541	190412143	190367342	ENSG00000113946.3	+	protein_coding	KNOWN	CLDN16	3	5	-0.398241
chr3	190428655	190449876	190439265	ENSG00000198398.2	-	protein_coding	KNOWN	TMEM207	1	5	-0.618800
chr3	190514051	190659750	190586900	ENSG00000196083.9	+	protein_coding	KNOWN	IL1RAP	19	13	-0.309765
chr3	190624595	190625169	190624882	ENSG00000231047.1	+	processed_pseudogene	KNOWN	GCNT1P3	1	1	-0.100653
chr3	190642163	190642503	190642333	ENSG00000223117.1	+	misc_RNA	KNOWN	RN7SKP296	1	1	-0.665031
chr3	190659216	190659750	190659483	ENSG00000273370.1	+	lincRNA	KNOWN	RP11-268E23.2	1	1	-0.380597
chr3	190697923	190698848	190698385	ENSG00000228730.1	-	lincRNA	KNOWN	RP11-95L3.2	1	2	-0.484509
chr3	190714811	190716399	190715605	ENSG00000232610.1	+	processed_pseudogene	KNOWN	CCT6P4	1	1	-0.271892
chr3	190830965	190832173	190831569	ENSG00000214147.2	+	processed_pseudogene	KNOWN	RP11-332P22.2	1	1	-0.738950
chr3	190852877	190892429	190872653	ENSG00000205835.8	-	protein_coding	KNOWN	GMNC	4	5	-0.640268
chr3	191199241	191265615	191232428	ENSG00000188729.6	+	protein_coding	KNOWN	OSTN	2	4	-0.391725
chr3	191213291	191234605	191223948	ENSG00000233308.1	-	antisense	KNOWN	OSTN-AS1	1	6	-0.425611
chr3	191267168	191330536	191298852	ENSG00000188958.9	-	protein_coding	KNOWN	UTS2B	9	9	-0.187142
chr3	191329077	191398670	191363873	ENSG00000152492.13	+	protein_coding	KNOWN	CCDC50	3	12	-0.066606
chr3	191461163	191461456	191461309	ENSG00000253548.1	+	protein_coding	KNOWN	PYDC2	1	1	-0.584311
chr3	191557324	191590356	191573840	ENSG00000223812.5	+	lincRNA	KNOWN	RP11-197K6.1	2	4	-0.707787
chr3	191641135	191641237	191641186	ENSG00000201860.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.607499
chr3	191641329	191641424	191641376	ENSG00000280857.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.607499
chr3	191952349	191952826	191952587	ENSG00000237653.2	-	processed_pseudogene	KNOWN	RP11-655G22.2	1	1	-0.618502
chr3	192029880	192036557	192033218	ENSG00000232353.5	+	lincRNA	KNOWN	RP11-655G22.1	3	3	-0.922097
chr3	192093122	192093436	192093279	ENSG00000222583.1	+	misc_RNA	KNOWN	RN7SKP222	1	1	-0.209899
chr3	192139395	192767764	192453579	ENSG00000114279.13	-	protein_coding	KNOWN	FGF12	9	6	-0.547160
chr3	192238037	192283097	192260567	ENSG00000231383.2	+	antisense	KNOWN	FGF12-AS1	2	5	-0.607941
chr3	192515022	192516573	192515797	ENSG00000230126.1	+	antisense	KNOWN	FGF12-AS2	1	2	-0.599170
chr3	192516831	192521398	192519114	ENSG00000226709.1	+	antisense	KNOWN	FGF12-AS3	1	2	-0.599170
chr3	192534009	192534112	192534060	ENSG00000238902.1	-	snoRNA	NOVEL	snoU13	1	1	-0.743970
chr3	192729555	192729716	192729635	ENSG00000200184.1	-	snRNA	KNOWN	RNU1-20P	1	1	-0.567779
chr3	192796815	192918161	192857488	ENSG00000180611.6	-	protein_coding	KNOWN	MB21D2	1	2	0.069309
chr3	193144464	193176864	193160664	ENSG00000232130.1	-	lincRNA	KNOWN	RP11-143P4.2	1	3	-0.566208
chr3	193155456	193157208	193156332	ENSG00000236229.1	-	processed_pseudogene	KNOWN	VEZF1P1	1	2	-0.692740
chr3	193241125	193277738	193259431	ENSG00000127252.5	+	protein_coding	KNOWN	HRASLS	2	4	-0.577557
chr3	193274790	193378843	193326816	ENSG00000187527.10	-	protein_coding	KNOWN	ATP13A5	5	30	-0.513131
chr3	193307244	193314362	193310803	ENSG00000236508.1	+	antisense	KNOWN	ATP13A5-AS1	1	2	-0.387806
chr3	193402077	193593111	193497594	ENSG00000127249.14	-	protein_coding	KNOWN	ATP13A4	11	30	-0.394350
chr3	193553213	193555088	193554150	ENSG00000225473.1	+	antisense	KNOWN	ATP13A4-AS1	2	3	-0.599886
chr3	193578812	193593090	193585951	ENSG00000236297.1	-	transcribed_processed_pseudogene	KNOWN	RP11-175P19.2	2	3	-0.333587
chr3	193593144	193697823	193645483	ENSG00000198836.8	+	protein_coding	KNOWN	OPA1	19	31	-0.395907
chr3	193618609	193627337	193622973	ENSG00000224855.5	-	antisense	KNOWN	OPA1-AS1	2	3	-0.194312
chr3	193624189	193624301	193624245	ENSG00000207370.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.194312
chr3	193740471	193740715	193740593	ENSG00000243991.3	-	misc_RNA	KNOWN	RN7SL447P	1	1	-0.137743
chr3	193765681	193766003	193765842	ENSG00000223986.1	+	processed_pseudogene	KNOWN	RP11-528A4.3	1	1	-0.481743
chr3	193842560	193844024	193843292	ENSG00000229155.1	-	lincRNA	KNOWN	RP11-528A4.2	2	3	-0.115700
chr3	193957372	194003659	193980515	ENSG00000214146.2	-	lincRNA	KNOWN	RP11-699L21.1	2	3	-0.281450
chr3	193980614	194006098	193993356	ENSG00000238043.1	+	lincRNA	KNOWN	RP11-699L21.2	1	3	-0.282813
chr3	193993331	193993985	193993658	ENSG00000224403.1	-	processed_pseudogene	KNOWN	DPPA2P3	1	1	-0.320983
chr3	194005259	194070970	194038114	ENSG00000230102.7	-	processed_transcript	KNOWN	RP11-407B7.1	31	5	-0.052532
chr3	194070103	194080443	194075273	ENSG00000276407.4	+	lincRNA	KNOWN	RP11-407B7.3	2	4	-0.032860
chr3	194091561	194109174	194100367	ENSG00000229964.1	+	lincRNA	KNOWN	RP11-135A1.3	1	2	0.084256
chr3	194130616	194131201	194130908	ENSG00000232874.1	-	antisense	KNOWN	RP11-135A1.2	1	2	0.395541
chr3	194136145	194138732	194137438	ENSG00000114315.3	+	protein_coding	KNOWN	HES1	2	4	0.395541
chr3	194145674	194145971	194145822	ENSG00000242201.3	+	misc_RNA	KNOWN	RN7SL215P	1	1	0.395541
chr3	194203016	194250153	194226584	ENSG00000225742.5	-	lincRNA	KNOWN	RP11-513G11.4	2	3	-0.143223
chr3	194247648	194257772	194252710	ENSG00000238097.1	+	lincRNA	KNOWN	RP11-513G11.3	1	4	-0.176418
chr3	194276682	194287368	194282025	ENSG00000228271.1	+	lincRNA	KNOWN	RP11-513G11.2	1	3	0.164748
chr3	194296465	194312803	194304634	ENSG00000214145.6	-	lincRNA	KNOWN	LINC00887	4	6	0.113503
chr3	194339765	194351328	194345546	ENSG00000178772.6	-	protein_coding	KNOWN	CPN2	2	2	0.365933
chr3	194355247	194369743	194362495	ENSG00000172061.8	-	protein_coding	KNOWN	LRRC15	2	3	0.335397
chr3	194394821	194398354	194396587	ENSG00000178732.5	-	protein_coding	KNOWN	GP5	1	1	0.310887
chr3	194402672	194498364	194450518	ENSG00000133657.14	-	protein_coding	KNOWN	ATP13A3	11	33	0.097100
chr3	194471923	194472085	194472004	ENSG00000271483.1	+	processed_pseudogene	KNOWN	RP11-384A12.1	1	1	-0.034385
chr3	194487454	194518279	194502866	ENSG00000233058.1	+	antisense	KNOWN	LINC00884	2	3	0.232780
chr3	194496317	194501503	194498910	ENSG00000244675.2	-	sense_overlapping	KNOWN	AC108676.1	1	2	0.367626
chr3	194533503	194533583	194533543	ENSG00000252053.1	-	snRNA	KNOWN	RNU6-1101P	1	1	-0.180739
chr3	194562978	194564001	194563489	ENSG00000232873.1	-	processed_pseudogene	KNOWN	RPL23AP93	1	3	0.173985
chr3	194584011	194590260	194587135	ENSG00000231770.5	+	antisense	KNOWN	TMEM44-AS1	3	4	0.387261
chr3	194587673	194633689	194610681	ENSG00000145014.17	-	protein_coding	KNOWN	TMEM44	14	11	0.345270
chr3	194632923	194645401	194639162	ENSG00000229334.1	+	antisense	KNOWN	AC046143.3	1	2	0.478504
chr3	194637505	194637664	194637584	ENSG00000272707.1	-	lincRNA	KNOWN	RP11-534C12.1	1	1	0.478504
chr3	194640788	194672477	194656632	ENSG00000041802.10	-	protein_coding	KNOWN	LSG1	8	14	0.318615
chr3	194686544	194689037	194687790	ENSG00000185112.5	+	protein_coding	KNOWN	FAM43A	1	1	0.100307
chr3	194705548	194706964	194706256	ENSG00000233987.1	+	lincRNA	KNOWN	AC106706.1	1	2	0.415606
chr3	194708421	194782168	194745294	ENSG00000237222.3	+	lincRNA	KNOWN	AC090505.6	4	4	0.206840
chr3	194755589	194757422	194756505	ENSG00000234805.1	+	processed_pseudogene	KNOWN	AC090505.5	1	1	0.408727
chr3	194765238	194768712	194766975	ENSG00000230401.1	-	lincRNA	KNOWN	AC090505.4	1	3	0.408727
chr3	194827890	194832592	194830241	ENSG00000238031.1	+	lincRNA	KNOWN	AC090505.1	1	3	0.130867
chr3	195068279	195271167	195169723	ENSG00000173950.15	-	protein_coding	KNOWN	XXYLT1	12	5	0.382436
chr3	195094588	195096057	195095322	ENSG00000233303.1	+	antisense	KNOWN	XXYLT1-AS1	1	4	0.410263
chr3	195134506	195134580	195134543	ENSG00000265333.1	-	miRNA	KNOWN	MIR3137	1	1	0.301255
chr3	195146728	195147003	195146865	ENSG00000244314.3	-	misc_RNA	KNOWN	RN7SL36P	1	1	0.301255
chr3	195147871	195152790	195150330	ENSG00000230266.1	+	antisense	KNOWN	XXYLT1-AS2	2	2	0.359381
chr3	195214787	195214893	195214840	ENSG00000206600.1	+	snRNA	KNOWN	RNU6-25P	1	1	0.394176
chr3	195245066	195245324	195245195	ENSG00000281397.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.197109
chr3	195274736	195443078	195358907	ENSG00000114331.13	-	protein_coding	KNOWN	ACAP2	16	25	-0.043978
chr3	195280723	195282741	195281732	ENSG00000229325.1	-	sense_intronic	KNOWN	ACAP2-IT1	1	2	0.177383
chr3	195349664	195350030	195349847	ENSG00000227433.1	+	processed_pseudogene	KNOWN	AC069213.4	1	1	-0.121181
chr3	195419436	195419546	195419491	ENSG00000207368.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.058251
chr3	195514425	195543386	195528905	ENSG00000184203.7	-	protein_coding	KNOWN	PPP1R2	7	6	0.098619
chr3	195523087	195523221	195523154	ENSG00000252620.1	-	snRNA	KNOWN	RNU6ATAC24P	1	1	0.135319
chr3	195544048	195550581	195547314	ENSG00000223711.1	+	antisense	KNOWN	AC091633.3	3	2	0.088398
chr3	195553792	195554043	195553917	ENSG00000265882.2	+	misc_RNA	KNOWN	RN7SL73P	1	1	0.420463
chr3	195554610	195555083	195554846	ENSG00000236844.1	+	processed_pseudogene	KNOWN	AC091633.2	1	1	0.420463
chr3	195561215	195561580	195561397	ENSG00000236425.1	-	processed_pseudogene	KNOWN	AC090018.1	1	1	0.420463
chr3	195568702	195584205	195576453	ENSG00000189058.8	-	protein_coding	KNOWN	APOD	5	6	0.126560
chr3	195614947	195620233	195617590	ENSG00000224769.1	+	unprocessed_pseudogene	KNOWN	MUC20P1	1	2	0.007517
chr3	195635188	195636301	195635744	ENSG00000282206.1	+	unprocessed_pseudogene	KNOWN	RP11-141C7.5	1	2	0.686232
chr3	195650146	195651472	195650809	ENSG00000271662.1	-	processed_pseudogene	KNOWN	RP11-141C7.3	1	2	0.397882
chr3	195655565	195657927	195656746	ENSG00000229178.1	-	lincRNA	KNOWN	AC069513.4	1	3	0.397882
chr3	195658062	195739964	195699013	ENSG00000242086.8	+	lincRNA	KNOWN	LINC00969	142	14	0.308243
chr3	195658096	195685904	195672000	ENSG00000215837.7	+	transcribed_unprocessed_pseudogene	KNOWN	SDHAP2	1	15	0.281196
chr3	195688008	195688120	195688064	ENSG00000276635.1	+	miRNA	NOVEL	AC233280.3	1	1	0.193871
chr3	195699401	195699497	195699449	ENSG00000207650.1	+	miRNA	KNOWN	MIR570	1	1	0.389672
chr3	195720882	195741123	195731002	ENSG00000176945.16	+	protein_coding	KNOWN	MUC20	8	5	0.331157
chr3	195746765	195812277	195779521	ENSG00000145113.21	-	protein_coding	KNOWN	MUC4	22	25	0.375337
chr3	195836193	195860404	195848298	ENSG00000223783.1	-	lincRNA	KNOWN	AC124944.5	3	2	0.535828
chr3	195843986	195844596	195844291	ENSG00000235836.1	+	processed_pseudogene	KNOWN	AC124944.4	1	1	0.631440
chr3	195863364	195911945	195887654	ENSG00000061938.16	-	protein_coding	KNOWN	TNK2	22	15	0.586464
chr3	195882329	195882395	195882362	ENSG00000276489.1	-	miRNA	KNOWN	MIR6829	1	1	0.552775
chr3	195908076	195911257	195909666	ENSG00000224614.1	+	antisense	KNOWN	TNK2-AS1	1	2	0.712430
chr3	195912049	195913986	195913017	ENSG00000226155.1	+	antisense	KNOWN	AC124944.3	2	2	0.794400
chr3	195913078	195913683	195913380	ENSG00000273009.1	-	lincRNA	KNOWN	RP11-352G9.1	1	1	0.794400
chr3	195928589	195928775	195928682	ENSG00000239122.1	-	snRNA	KNOWN	RNU2-11P	1	1	0.794400
chr3	195937243	195938739	195937991	ENSG00000231443.2	+	processed_pseudogene	KNOWN	AC024937.6	1	2	0.286564
chr3	195949188	195952695	195950941	ENSG00000260261.1	-	lincRNA	KNOWN	RP11-480A16.1	1	1	0.492495
chr3	195959748	195990318	195975033	ENSG00000185485.14	-	transcribed_unprocessed_pseudogene	KNOWN	SDHAP1	8	17	0.482572
chr3	195960500	195960612	195960556	ENSG00000278820.1	-	miRNA	NOVEL	AC024937.1	1	1	0.554442
chr3	195996738	195998233	195997485	ENSG00000231464.1	+	processed_pseudogene	KNOWN	AC024937.4	1	2	0.255712
chr3	196027183	196082189	196054686	ENSG00000072274.12	-	protein_coding	KNOWN	TFRC	15	19	0.069264
chr3	196044695	196045254	196044974	ENSG00000228413.1	+	processed_pseudogene	KNOWN	AC024937.2	1	2	-0.235439
chr3	196072819	196072880	196072849	ENSG00000252174.1	+	snRNA	KNOWN	RNU7-18P	1	1	0.197602
chr3	196142636	196160890	196151763	ENSG00000224652.1	+	lincRNA	KNOWN	LINC00885	1	3	0.554490
chr3	196197449	196211437	196204443	ENSG00000163958.13	-	protein_coding	KNOWN	ZDHHC19	7	9	0.535196
chr3	196202349	196202453	196202401	ENSG00000222335.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.535598
chr3	196211487	196243178	196227332	ENSG00000163959.9	+	protein_coding	KNOWN	SLC51A	14	9	0.445664
chr3	196214222	196287957	196251089	ENSG00000161217.11	-	protein_coding	KNOWN	PCYT1A	16	10	0.417446
chr3	196248230	196318222	196283226	ENSG00000272741.1	-	protein_coding	KNOWN	RP11-447L10.1	1	6	0.402089
chr3	196250542	196251654	196251098	ENSG00000228028.2	+	antisense	KNOWN	AC069257.8	2	2	0.473421
chr3	196291219	196318299	196304759	ENSG00000213123.10	-	protein_coding	KNOWN	TCTEX1D2	5	6	0.390912
chr3	196298061	196298215	196298138	ENSG00000237418.1	-	processed_pseudogene	KNOWN	AC069257.6	1	1	0.326047
chr3	196316082	196338373	196327227	ENSG00000273331.1	-	protein_coding	KNOWN	TM4SF19-TCTEX1D2	1	6	0.444925
chr3	196318330	196325570	196321950	ENSG00000235897.1	+	antisense	KNOWN	TM4SF19-AS1	3	2	0.537680
chr3	196319342	196338503	196328922	ENSG00000145107.15	-	protein_coding	KNOWN	TM4SF19	4	6	0.428098
chr3	196341609	196341715	196341662	ENSG00000212146.1	-	snRNA	KNOWN	RNU6-910P	1	1	0.290772
chr3	196347662	196432474	196390068	ENSG00000163960.11	-	protein_coding	KNOWN	UBXN7	6	11	0.274778
chr3	196393710	196393812	196393761	ENSG00000206644.1	-	snRNA	KNOWN	RNU6-1279P	1	1	0.307498
chr3	196397508	196397778	196397643	ENSG00000241868.3	-	misc_RNA	KNOWN	RN7SL434P	1	1	0.307498
chr3	196399911	196400207	196400059	ENSG00000243339.3	+	misc_RNA	KNOWN	RN7SL738P	1	1	0.307498
chr3	196423322	196423522	196423422	ENSG00000226345.1	+	processed_pseudogene	KNOWN	AC083822.2	1	1	0.410521
chr3	196431385	196432530	196431957	ENSG00000225822.4	+	antisense	KNOWN	UBXN7-AS1	1	2	0.439915
chr3	196452996	196453055	196453025	ENSG00000225240.1	-	unprocessed_pseudogene	KNOWN	AC117490.2	1	1	0.132406
chr3	196468783	196503768	196486275	ENSG00000163961.4	-	protein_coding	KNOWN	RNF168	2	6	0.341192
chr3	196474801	196475394	196475097	ENSG00000273013.1	+	antisense	KNOWN	CTD-2002J20.1	1	1	0.485137
chr3	196506877	196515366	196511121	ENSG00000214097.4	-	protein_coding	KNOWN	SMCO1	2	3	0.411699
chr3	196527339	196528791	196528065	ENSG00000213358.3	-	unprocessed_pseudogene	KNOWN	AC092933.4	1	2	0.563613
chr3	196536532	196536702	196536617	ENSG00000225770.1	+	processed_pseudogene	KNOWN	AC092933.3	1	1	0.317995
chr3	196554177	196568674	196561425	ENSG00000185798.7	-	protein_coding	KNOWN	WDR53	5	4	0.158334
chr3	196568611	196589059	196578835	ENSG00000174013.7	+	protein_coding	KNOWN	FBXO45	2	3	0.371896
chr3	196631498	196632587	196632042	ENSG00000232065.1	-	antisense	KNOWN	LINC01063	1	2	0.662484
chr3	196639686	196662004	196650845	ENSG00000174004.5	+	protein_coding	KNOWN	NRROS	2	3	0.441927
chr3	196639775	196736007	196687891	ENSG00000163964.13	+	protein_coding	KNOWN	PIGX	9	8	0.185125
chr3	196706277	196712293	196709285	ENSG00000174007.7	-	protein_coding	KNOWN	CEP19	2	3	0.010836
chr3	196708859	196708964	196708911	ENSG00000201441.1	-	snRNA	KNOWN	RNU6-646P	1	1	-0.009704
chr3	196739857	196832647	196786252	ENSG00000180370.10	+	protein_coding	KNOWN	PAK2	3	15	0.181027
chr3	196747192	196747324	196747258	ENSG00000272359.1	-	snRNA	KNOWN	RNU4-89P	1	1	-0.086978
chr3	196784980	196785086	196785033	ENSG00000206892.1	-	snRNA	KNOWN	RNU6-42P	1	1	0.369526
chr3	196867856	196934714	196901285	ENSG00000119231.10	+	protein_coding	KNOWN	SENP5	7	10	0.263874
chr3	196912646	196914579	196913612	ENSG00000230732.4	+	sense_intronic	KNOWN	AC127904.2	1	2	0.381498
chr3	196935402	196942597	196938999	ENSG00000114503.10	-	protein_coding	KNOWN	NCBP2	13	5	0.069390
chr3	196939877	196942534	196941205	ENSG00000225578.1	+	antisense	KNOWN	NCBP2-AS1	1	3	0.069390
chr3	196942623	196943540	196943081	ENSG00000270170.1	+	protein_coding	KNOWN	NCBP2-AS2	1	1	0.069390
chr3	196946343	196969060	196957701	ENSG00000119227.7	-	protein_coding	KNOWN	PIGZ	4	3	0.233159
chr3	196983890	196987558	196985724	ENSG00000233487.6	-	transcribed_processed_pseudogene	KNOWN	RPSAP69	2	2	0.705637
chr3	196988621	197029816	197009218	ENSG00000163975.11	-	protein_coding	KNOWN	MFI2	7	16	0.444056
chr3	196999460	197004744	197002102	ENSG00000228109.1	+	antisense	KNOWN	MFI2-AS1	5	4	0.409283
chr3	197042560	197299300	197170930	ENSG00000075711.20	-	protein_coding	KNOWN	DLG1	28	26	-0.073837
chr3	197293878	197293948	197293913	ENSG00000265850.1	-	miRNA	KNOWN	MIR4797	1	1	0.179988
chr3	197298252	197303747	197300999	ENSG00000227375.5	+	antisense	KNOWN	DLG1-AS1	2	3	0.179988
chr3	197445061	197458323	197451692	ENSG00000235126.1	-	lincRNA	KNOWN	AC128709.3	1	3	0.470007
chr3	197450327	197456654	197453490	ENSG00000229912.1	-	lincRNA	KNOWN	AC128709.4	1	3	0.548849
chr3	197458405	197467105	197462755	ENSG00000237167.1	+	lincRNA	KNOWN	AC128709.2	1	2	0.548849
chr3	197505262	197506986	197506124	ENSG00000272989.1	-	lincRNA	KNOWN	RP13-616I3.1	1	1	0.694028
chr3	197509783	197573323	197541553	ENSG00000161267.11	-	protein_coding	KNOWN	BDH1	17	8	0.449315
chr3	197578213	197627906	197603059	ENSG00000214135.8	-	transcribed_unprocessed_pseudogene	KNOWN	AC024560.3	7	10	0.360581
chr3	197580344	197580629	197580486	ENSG00000213519.2	-	processed_pseudogene	KNOWN	AC132008.1	1	1	0.448136
chr3	197634315	197635811	197635063	ENSG00000249626.1	+	processed_pseudogene	KNOWN	RP11-496H1.1	1	1	0.529613
chr3	197645669	197646017	197645843	ENSG00000273308.1	+	lincRNA	KNOWN	RP11-496H1.2	1	1	0.529613
chr3	197660565	197665757	197663161	ENSG00000236833.1	-	lincRNA	KNOWN	AC024560.2	1	2	0.534732
chr3	197671393	197749727	197710560	ENSG00000145016.13	-	protein_coding	KNOWN	RUBCN	10	21	0.436687
chr3	197674496	197674576	197674536	ENSG00000216042.1	-	miRNA	KNOWN	MIR922	1	1	0.623148
chr3	197737179	197787596	197762387	ENSG00000122068.12	+	protein_coding	KNOWN	FYTTD1	9	10	0.130945
chr3	197789700	197790369	197790034	ENSG00000273375.1	+	lincRNA	KNOWN	RP11-803P9.1	1	1	0.133967
chr3	197791226	197888436	197839831	ENSG00000186001.12	+	protein_coding	KNOWN	LRCH3	19	22	0.189146
chr3	197830685	197831296	197830990	ENSG00000234136.1	-	antisense	KNOWN	AC055764.1	1	2	0.126757
chr3	197850400	197850954	197850677	ENSG00000234742.1	-	processed_pseudogene	KNOWN	AC144530.1	1	1	0.239890
chr3	197889075	197960142	197924608	ENSG00000114473.13	-	protein_coding	KNOWN	IQCG	13	12	0.190599
chr3	197894507	197894613	197894560	ENSG00000199306.1	+	snRNA	KNOWN	RNU6-858P	1	1	0.178032
chr3	197949987	197956610	197953298	ENSG00000182899.14	+	protein_coding	KNOWN	RPL35A	9	5	0.376811
chr3	197960200	198043720	198001960	ENSG00000185621.11	+	protein_coding	KNOWN	LMLN	11	17	-0.126229
chr3	197994601	197994709	197994655	ENSG00000201622.1	+	snRNA	KNOWN	RNU6-621P	1	1	-0.272883
chr3	198038321	198039234	198038777	ENSG00000232832.1	-	antisense	KNOWN	LMLN-AS1	1	3	-0.173742
chr3	198053522	198080720	198067121	ENSG00000226435.10	-	transcribed_unprocessed_pseudogene	KNOWN	ANKRD18DP	4	10	-0.312912
chr3	198071311	198071417	198071364	ENSG00000212297.1	-	snRNA	KNOWN	RNU6-821P	1	1	-0.579682
chr3	198110112	198111878	198110995	ENSG00000232783.5	+	transcribed_unprocessed_pseudogene	KNOWN	FRG2FP	4	4	-0.365053
chr3	198119721	198120778	198120249	ENSG00000213113.3	+	unprocessed_pseudogene	KNOWN	TUBB8P8	1	1	-0.365053
chr3	198121479	198123232	198122355	ENSG00000236246.2	-	unprocessed_pseudogene	KNOWN	FAM166AP10	1	5	-0.365053
chr3	198153287	198222513	198187900	ENSG00000236438.7	+	transcribed_unprocessed_pseudogene	KNOWN	FAM157A	3	15	0.182602
chr3	198196746	198196849	198196797	ENSG00000222792.1	+	snRNA	KNOWN	RNU6-860P	1	1	0.237109
chr3	198223497	198226310	198224903	ENSG00000230304.1	-	processed_pseudogene	KNOWN	CICP6	1	2	0.169994
chr3	198228194	198228376	198228285	ENSG00000226008.1	+	unprocessed_pseudogene	KNOWN	SEPT14P3	1	1	0.169994
chr4	49096	50124	49610	ENSG00000248302.3	-	transcribed_processed_pseudogene	KNOWN	BNIP3P41	2	1	-0.185571
chr4	53285	88211	70748	ENSG00000272602.5	+	protein_coding	KNOWN	ZNF595	5	4	-0.317009
chr4	65125	65233	65179	ENSG00000207643.1	+	miRNA	NOVEL	AC253576.1	1	1	-0.209262
chr4	105959	107114	106536	ENSG00000250238.1	-	processed_pseudogene	KNOWN	Z95704.3	1	1	-0.382380
chr4	124480	163989	144234	ENSG00000250312.6	+	protein_coding	KNOWN	ZNF718	2	4	0.055316
chr4	136461	136568	136514	ENSG00000211553.1	+	miRNA	NOVEL	AC253576.2	1	1	0.195496
chr4	149738	150317	150027	ENSG00000275426.1	+	sense_intronic	KNOWN	CH17-262A2.1	1	1	0.018645
chr4	201409	205009	203209	ENSG00000250892.1	-	unprocessed_pseudogene	KNOWN	RP11-1365D11.1	1	2	0.034767
chr4	212610	255985	234297	ENSG00000198155.5	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF876P	2	3	-0.115726
chr4	224215	224323	224269	ENSG00000252616.1	+	miRNA	NOVEL	AC079140.1	1	1	0.084574
chr4	268982	269531	269256	ENSG00000251188.1	-	processed_pseudogene	KNOWN	RP11-478C6.6	1	1	-0.282404
chr4	269866	270175	270020	ENSG00000251689.1	-	processed_pseudogene	KNOWN	RP11-478C6.5	1	1	-0.209966
chr4	270675	305321	287998	ENSG00000186777.11	-	protein_coding	KNOWN	ZNF732	2	4	-0.294700
chr4	336258	336786	336522	ENSG00000251535.1	-	processed_pseudogene	KNOWN	RP11-478C6.1	1	1	-0.200985
chr4	337814	384864	361339	ENSG00000131127.13	+	protein_coding	KNOWN	ZNF141	6	5	-0.113708
chr4	338097	338583	338340	ENSG00000248564.1	-	processed_pseudogene	KNOWN	RP11-478C6.2	1	1	-0.200985
chr4	342821	342962	342891	ENSG00000250321.1	-	processed_pseudogene	KNOWN	RP11-478C6.4	1	1	-0.200985
chr4	350157	350252	350204	ENSG00000207642.1	+	miRNA	KNOWN	MIR571	1	1	-0.155446
chr4	386174	454070	420122	ENSG00000281016.1	+	antisense	KNOWN	RP11-2H3.7	1	2	0.016952
chr4	393534	393658	393596	ENSG00000249025.1	+	processed_pseudogene	KNOWN	ZNF519P4	1	1	0.049179
chr4	409809	409915	409862	ENSG00000211482.1	+	miRNA	NOVEL	AC092574.1	1	1	0.049179
chr4	416118	416537	416327	ENSG00000272885.1	-	lincRNA	KNOWN	RP11-2H3.6	1	1	0.076138
chr4	425435	474129	449782	ENSG00000251595.7	-	transcribed_processed_pseudogene	KNOWN	ABCA11P	4	4	0.154056
chr4	425815	499156	462485	ENSG00000182903.15	-	protein_coding	KNOWN	ZNF721	6	7	0.125978
chr4	467528	467636	467582	ENSG00000252150.1	-	miRNA	NOVEL	AC092574.2	1	1	0.531035
chr4	499210	540196	519703	ENSG00000174227.15	+	protein_coding	KNOWN	PIGG	26	13	0.338551
chr4	573880	574412	574146	ENSG00000273238.1	-	lincRNA	KNOWN	RP11-1263C18.1	1	1	0.728180
chr4	625584	670782	648183	ENSG00000133256.12	+	protein_coding	KNOWN	PDE6B	12	22	0.680868
chr4	652850	656213	654531	ENSG00000242686.4	-	antisense	KNOWN	RP11-1191J2.2	4	4	0.702950
chr4	661209	661945	661577	ENSG00000272927.1	-	antisense	KNOWN	RP11-1191J2.5	1	1	0.702950
chr4	672436	674338	673387	ENSG00000169020.9	-	protein_coding	KNOWN	ATP5I	5	4	1.013238
chr4	673580	682033	677806	ENSG00000215375.6	+	protein_coding	KNOWN	MYL5	9	8	1.013238
chr4	681829	689441	685635	ENSG00000169026.12	-	protein_coding	KNOWN	MFSD7	9	10	1.013238
chr4	705748	770640	738194	ENSG00000185619.17	+	protein_coding	KNOWN	PCGF3	14	13	0.941685
chr4	722275	724034	723154	ENSG00000248416.1	-	antisense	KNOWN	RP11-1191J2.4	1	2	0.958725
chr4	757022	757740	757381	ENSG00000272588.1	-	antisense	KNOWN	RP11-440L14.4	1	1	0.899347
chr4	762387	781849	772118	ENSG00000249592.5	-	antisense	KNOWN	RP11-440L14.1	4	2	0.997092
chr4	764487	765074	764780	ENSG00000233799.1	-	antisense	KNOWN	AC139887.4	1	2	0.899347
chr4	784957	826198	805577	ENSG00000168993.14	-	protein_coding	KNOWN	CPLX1	4	5	0.859213
chr4	836512	837224	836868	ENSG00000260262.1	-	lincRNA	KNOWN	RP11-440L14.3	1	1	1.308687
chr4	849276	932373	890824	ENSG00000178950.16	-	protein_coding	KNOWN	GAK	23	28	1.038774
chr4	932387	958656	945521	ENSG00000127419.16	+	protein_coding	KNOWN	TMEM175	22	12	0.935931
chr4	958887	986895	972891	ENSG00000145214.13	-	protein_coding	KNOWN	DGKQ	5	23	1.252629
chr4	979073	993440	986256	ENSG00000145217.13	-	protein_coding	KNOWN	SLC26A1	5	4	1.349127
chr4	986997	1004506	995751	ENSG00000127415.12	+	protein_coding	KNOWN	IDUA	12	14	1.243281
chr4	1009936	1026897	1018416	ENSG00000127418.14	+	protein_coding	KNOWN	FGFRL1	7	8	1.087884
chr4	1027678	1028972	1028325	ENSG00000250259.1	+	lincRNA	KNOWN	RP11-460I19.2	1	2	1.087419
chr4	1056250	1113562	1084906	ENSG00000178222.12	-	protein_coding	KNOWN	RNF212	15	10	0.785482
chr4	1100016	1101558	1100787	ENSG00000251639.2	-	processed_pseudogene	KNOWN	RP11-20I20.1	1	2	0.882397
chr4	1113639	1132977	1123308	ENSG00000251652.1	+	antisense	KNOWN	RP11-20I20.2	2	3	0.458285
chr4	1115197	1153726	1134461	ENSG00000215367.10	-	unitary_pseudogene	KNOWN	TMED11P	3	5	0.493068
chr4	1118884	1119013	1118948	ENSG00000212458.1	+	snoRNA	NOVEL	SNORA48	1	1	0.446769
chr4	1151372	1153701	1152536	ENSG00000227189.2	+	antisense	KNOWN	AC092535.3	1	2	0.524103
chr4	1166932	1208962	1187947	ENSG00000159674.11	-	protein_coding	KNOWN	SPON2	22	8	0.653584
chr4	1167778	1168174	1167976	ENSG00000273179.1	+	antisense	KNOWN	RP11-20I20.4	1	1	0.524103
chr4	1210120	1218591	1214355	ENSG00000280927.1	+	antisense	KNOWN	CTBP1-AS	1	6	0.935650
chr4	1211448	1249953	1230700	ENSG00000159692.15	-	protein_coding	KNOWN	CTBP1	19	10	0.944985
chr4	1249300	1288291	1268795	ENSG00000196810.4	+	antisense	KNOWN	CTBP1-AS2	6	3	0.784297
chr4	1289851	1340147	1314999	ENSG00000090316.15	+	protein_coding	KNOWN	MAEA	20	10	1.056787
chr4	1347266	1388049	1367657	ENSG00000163945.15	+	protein_coding	KNOWN	UVSSA	8	14	1.139088
chr4	1356581	1358075	1357328	ENSG00000254094.1	+	sense_intronic	KNOWN	AC078852.1	1	2	1.163250
chr4	1358479	1359461	1358970	ENSG00000253399.1	+	sense_intronic	KNOWN	AC078852.2	1	2	1.163250
chr4	1391552	1395989	1393770	ENSG00000179979.8	+	protein_coding	KNOWN	CRIPAK	1	1	0.961931
chr4	1402932	1406331	1404631	ENSG00000235608.1	-	protein_coding	KNOWN	NKX1-1	1	2	0.961931
chr4	1550284	1550572	1550428	ENSG00000272783.1	+	lincRNA	KNOWN	RP13-1016M1.2	1	1	1.091992
chr4	1574062	1580253	1577157	ENSG00000244459.2	-	lincRNA	KNOWN	RP11-1398P2.1	1	2	1.036594
chr4	1617915	1684302	1651108	ENSG00000174137.12	-	protein_coding	KNOWN	FAM53A	7	6	1.049994
chr4	1683420	1683529	1683474	ENSG00000207009.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.798546
chr4	1692800	1712555	1702677	ENSG00000163950.12	-	protein_coding	KNOWN	SLBP	6	8	0.600658
chr4	1712821	1713622	1713221	ENSG00000270195.1	+	lincRNA	KNOWN	RP11-572O17.1	1	1	0.548630
chr4	1715952	1721358	1718655	ENSG00000168936.10	-	protein_coding	KNOWN	TMEM129	6	5	0.548630
chr4	1721490	1745176	1733333	ENSG00000013810.18	+	protein_coding	KNOWN	TACC3	13	16	0.665224
chr4	1793307	1808872	1801089	ENSG00000068078.17	+	protein_coding	KNOWN	FGFR3	10	19	1.130211
chr4	1811479	1856247	1833863	ENSG00000168924.14	-	protein_coding	KNOWN	LETM1	7	14	0.898086
chr4	1869153	1869214	1869183	ENSG00000240455.2	-	miRNA	KNOWN	RN7SL671P	1	1	0.903135
chr4	1871424	1982207	1926815	ENSG00000109685.17	+	protein_coding	KNOWN	WHSC1	27	25	0.605321
chr4	1974636	1974760	1974698	ENSG00000249784.1	+	scaRNA	KNOWN	SCARNA22	1	1	0.257843
chr4	1982714	2041903	2012308	ENSG00000185049.12	-	protein_coding	KNOWN	NELFA	16	11	0.496352
chr4	1986384	1986477	1986430	ENSG00000216105.1	-	miRNA	KNOWN	MIR943	1	1	0.257843
chr4	2041993	2043970	2042981	ENSG00000243449.6	+	protein_coding	KNOWN	C4orf48	2	4	0.650360
chr4	2059512	2069089	2064300	ENSG00000185818.7	+	protein_coding	KNOWN	NAT8L	2	3	0.742330
chr4	2071918	2242121	2157019	ENSG00000130997.16	-	protein_coding	KNOWN	POLN	13	26	0.409842
chr4	2088718	2090617	2089667	ENSG00000249006.1	-	processed_pseudogene	KNOWN	RP11-317B7.2	1	1	0.854038
chr4	2139673	2141058	2140365	ENSG00000250623.1	+	antisense	KNOWN	RP11-317B7.3	1	2	0.455428
chr4	2227464	2242164	2234814	ENSG00000214367.7	-	protein_coding	KNOWN	HAUS3	5	6	0.068840
chr4	2234251	2234499	2234375	ENSG00000249047.2	+	processed_pseudogene	KNOWN	COX6B1P5	1	1	-0.021537
chr4	2247432	2262294	2254863	ENSG00000123933.14	-	protein_coding	KNOWN	MXD4	5	6	0.783835
chr4	2250077	2250156	2250116	ENSG00000265080.1	-	miRNA	KNOWN	MIR4800	1	1	0.951984
chr4	2269582	2418663	2344122	ENSG00000159733.13	-	protein_coding	KNOWN	ZFYVE28	11	13	0.793396
chr4	2295584	2319089	2307336	ENSG00000251148.1	+	antisense	KNOWN	RP11-478C1.7	1	3	0.679757
chr4	2316197	2316506	2316351	ENSG00000239247.3	-	misc_RNA	KNOWN	RN7SL589P	1	1	0.586499
chr4	2324467	2325082	2324774	ENSG00000249077.1	+	processed_pseudogene	KNOWN	RP11-478C1.8	1	1	0.586499
chr4	2418974	2462942	2440958	ENSG00000206113.8	+	protein_coding	KNOWN	CFAP99	6	15	0.889241
chr4	2426476	2462926	2444701	ENSG00000249428.6	+	protein_coding	KNOWN	CFAP99	1	15	0.873923
chr4	2462220	2625320	2543770	ENSG00000063978.15	+	protein_coding	KNOWN	RNF4	22	9	0.759128
chr4	2463797	2464124	2463960	ENSG00000248399.1	+	sense_intronic	KNOWN	RP11-503N18.4	1	2	0.888739
chr4	2505081	2506279	2505680	ENSG00000251229.1	-	processed_pseudogene	KNOWN	RP11-503N18.5	1	2	0.643787
chr4	2607870	2608146	2608008	ENSG00000248155.1	-	unprocessed_pseudogene	KNOWN	WI2-89927D4.1	1	1	0.780702
chr4	2615124	2615224	2615174	ENSG00000206738.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.797879
chr4	2625261	2732565	2678913	ENSG00000125386.14	+	protein_coding	KNOWN	FAM193A	11	20	0.568330
chr4	2741648	2756376	2749012	ENSG00000168884.14	-	protein_coding	KNOWN	TNIP2	7	6	0.832179
chr4	2793023	2841098	2817060	ENSG00000087266.15	+	protein_coding	KNOWN	SH3BP2	29	14	1.185129
chr4	2843857	2930076	2886966	ENSG00000087274.16	+	protein_coding	KNOWN	ADD1	28	18	0.657382
chr4	2930561	2934859	2932710	ENSG00000109736.14	-	protein_coding	KNOWN	MFSD10	11	13	0.915114
chr4	2934899	2961738	2948318	ENSG00000249673.6	+	antisense	KNOWN	NOP14-AS1	7	5	0.966542
chr4	2937933	2963385	2950659	ENSG00000087269.15	-	protein_coding	KNOWN	NOP14	5	19	0.976954
chr4	2963608	3040747	3002177	ENSG00000125388.19	+	protein_coding	KNOWN	GRK4	10	16	0.626643
chr4	2981427	2981512	2981469	ENSG00000278136.1	-	miRNA	NOVEL	AL390065.1	1	1	0.820079
chr4	3044101	3044207	3044154	ENSG00000199335.1	+	snRNA	KNOWN	RNU6-204P	1	1	0.527378
chr4	3063471	3074514	3068992	ENSG00000251075.1	-	antisense	KNOWN	HTT-AS	1	3	0.704551
chr4	3063472	3063701	3063586	ENSG00000278778.1	+	misc_RNA	NOVEL	HTT-AS1_1	1	1	0.729422
chr4	3069977	3070151	3070064	ENSG00000274693.1	+	misc_RNA	NOVEL	HTT-AS1_2	1	1	0.676282
chr4	3074681	3243959	3159320	ENSG00000197386.10	+	protein_coding	KNOWN	HTT	13	67	0.509345
chr4	3244369	3271738	3258053	ENSG00000188981.10	+	protein_coding	KNOWN	MSANTD1	4	6	0.889178
chr4	3293028	3439913	3366470	ENSG00000159788.18	+	protein_coding	KNOWN	RGS12	25	18	0.678143
chr4	3312512	3313058	3312785	ENSG00000248840.2	+	transcribed_processed_pseudogene	KNOWN	RP11-357G3.2	2	1	0.654353
chr4	3323977	3324762	3324369	ENSG00000248843.1	-	processed_pseudogene	KNOWN	RP11-357G3.1	1	1	0.654353
chr4	3441887	3449495	3445691	ENSG00000109758.8	+	protein_coding	KNOWN	HGFAC	4	15	0.997664
chr4	3463311	3501473	3482392	ENSG00000175920.15	+	protein_coding	KNOWN	DOK7	7	7	0.883545
chr4	3503597	3504457	3504027	ENSG00000261643.1	-	sense_overlapping	KNOWN	RP11-529E10.6	1	1	1.065192
chr4	3506376	3532559	3519467	ENSG00000163956.10	-	protein_coding	KNOWN	LRPAP1	4	8	0.918821
chr4	3538044	3538418	3538231	ENSG00000280230.1	+	protein_coding	KNOWN	AL590235.1	1	1	0.593652
chr4	3544555	3548796	3546675	ENSG00000270090.5	+	lincRNA	KNOWN	RP11-529E10.7	2	5	0.593652
chr4	3576869	3590711	3583790	ENSG00000216560.4	+	processed_transcript	KNOWN	LINC00955	2	4	0.430413
chr4	3633029	3633975	3633502	ENSG00000250681.1	+	lincRNA	KNOWN	RP3-368B9.2	1	2	0.559431
chr4	3673593	3677855	3675724	ENSG00000250632.1	-	lincRNA	KNOWN	RP3-513G18.2	1	3	0.799101
chr4	3758748	3763390	3761069	ENSG00000250986.1	-	lincRNA	KNOWN	AC141928.1	1	2	0.761602
chr4	3766348	3768526	3767437	ENSG00000184160.7	+	protein_coding	KNOWN	ADRA2C	2	2	0.761602
chr4	3889356	3890249	3889802	ENSG00000251166.1	-	unprocessed_pseudogene	KNOWN	OR7E163P	1	1	0.388147
chr4	3901566	3902594	3902080	ENSG00000234386.4	-	unprocessed_pseudogene	KNOWN	OR7E162P	1	1	0.174849
chr4	3910283	3910604	3910443	ENSG00000249522.1	+	processed_pseudogene	KNOWN	RP11-718M20.5	1	1	0.477159
chr4	3915183	3955419	3935301	ENSG00000253917.4	-	processed_transcript	KNOWN	AC226119.5	1	6	0.440844
chr4	3915187	3924274	3919730	ENSG00000271977.1	-	transcribed_unprocessed_pseudogene	KNOWN	AC226119.4	1	4	0.477159
chr4	3935447	3942519	3938983	ENSG00000251271.3	+	unprocessed_pseudogene	KNOWN	ALG1L7P	1	8	0.428717
chr4	3941760	3955419	3948589	ENSG00000251669.5	-	transcribed_unprocessed_pseudogene	KNOWN	FAM86EP	9	8	0.411894
chr4	3967034	3967660	3967347	ENSG00000250476.1	-	processed_pseudogene	KNOWN	ENPP7P9	1	1	0.386322
chr4	4076711	4077491	4077101	ENSG00000243894.1	-	processed_pseudogene	KNOWN	RP11-489M13.1	1	1	-0.140669
chr4	4084334	4084481	4084407	ENSG00000221301.1	+	miRNA	NOVEL	AC116562.1	1	1	-0.140669
chr4	4086638	4086814	4086726	ENSG00000250940.1	+	processed_pseudogene	KNOWN	RP11-489M13.3	1	1	-0.140669
chr4	4117925	4118284	4118104	ENSG00000248669.1	-	processed_pseudogene	KNOWN	RP11-489M13.2	1	1	0.113053
chr4	4126659	4127569	4127114	ENSG00000198787.5	-	unprocessed_pseudogene	KNOWN	OR4D12P	1	1	0.113053
chr4	4143458	4150421	4146939	ENSG00000250381.1	-	unprocessed_pseudogene	KNOWN	UNC93B4	1	4	-0.065263
chr4	4156522	4157443	4156982	ENSG00000250710.3	-	unprocessed_pseudogene	KNOWN	OR7E99P	1	1	0.015641
chr4	4174319	4175238	4174778	ENSG00000249844.1	-	unprocessed_pseudogene	KNOWN	OR7E43P	1	1	0.174454
chr4	4188803	4226889	4207846	ENSG00000163982.5	-	protein_coding	KNOWN	OTOP1	1	6	0.104688
chr4	4235542	4248212	4241877	ENSG00000132406.11	-	protein_coding	KNOWN	TMEM128	2	5	0.183622
chr4	4267701	4290169	4278935	ENSG00000145220.13	-	protein_coding	KNOWN	LYAR	4	10	0.307901
chr4	4290251	4321786	4306018	ENSG00000168826.15	+	protein_coding	KNOWN	ZBTB49	6	8	0.343221
chr4	4321962	4334182	4328072	ENSG00000248516.1	+	lincRNA	KNOWN	RP11-265O12.1	1	3	0.152692
chr4	4348140	4419058	4383599	ENSG00000168824.14	+	protein_coding	KNOWN	NSG1	11	9	0.408349
chr4	4415742	4542346	4479044	ENSG00000168818.9	-	protein_coding	KNOWN	STX18	10	11	0.182630
chr4	4476121	4481700	4478910	ENSG00000248221.1	-	sense_intronic	KNOWN	STX18-IT1	1	4	0.009530
chr4	4507078	4507777	4507427	ENSG00000237170.3	+	processed_pseudogene	KNOWN	RPS7P15	1	2	0.192156
chr4	4542131	4710938	4626534	ENSG00000247708.7	+	antisense	KNOWN	STX18-AS1	7	6	0.240282
chr4	4820405	4821452	4820928	ENSG00000280310.1	+	TEC	KNOWN	RP11-326I19.2	1	1	0.366933
chr4	4844437	4850827	4847632	ENSG00000273396.1	+	lincRNA	KNOWN	LINC01396	1	4	-0.143138
chr4	4859666	4863936	4861801	ENSG00000163132.6	+	protein_coding	KNOWN	MSX1	2	2	0.439915
chr4	4894182	4895173	4894677	ENSG00000251587.1	-	processed_pseudogene	KNOWN	LDHAP1	1	1	0.035724
chr4	4920770	4921064	4920917	ENSG00000200761.1	-	misc_RNA	KNOWN	RN7SKP113	1	1	0.222494
chr4	5014586	5019472	5017029	ENSG00000170891.10	-	protein_coding	KNOWN	CYTL1	3	4	0.056802
chr4	5051442	5500998	5276220	ENSG00000152953.12	+	protein_coding	KNOWN	STK32B	8	13	-0.155603
chr4	5426885	5426984	5426934	ENSG00000252266.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.012920
chr4	5458581	5458881	5458731	ENSG00000201496.1	-	misc_RNA	KNOWN	RN7SKP275	1	1	0.303098
chr4	5524569	5527801	5526185	ENSG00000082929.8	+	processed_transcript	KNOWN	LINC01587	4	4	-0.157368
chr4	5542772	5709548	5626160	ENSG00000173040.12	-	protein_coding	KNOWN	EVC2	4	23	0.216880
chr4	5711197	5814305	5762751	ENSG00000072840.12	+	protein_coding	KNOWN	EVC	5	21	0.416309
chr4	5748084	5893058	5820571	ENSG00000072832.14	-	protein_coding	KNOWN	CRMP1	6	14	0.293285
chr4	5897591	5989818	5943704	ENSG00000181215.12	-	protein_coding	KNOWN	C4orf50	2	8	0.011698
chr4	5923275	5923328	5923301	ENSG00000263631.1	-	miRNA	KNOWN	MIR378D1	1	1	-0.011720
chr4	6026199	6200591	6113395	ENSG00000152969.16	-	protein_coding	KNOWN	JAKMIP1	7	21	0.077807
chr4	6200733	6238317	6219525	ENSG00000249896.1	+	lincRNA	KNOWN	RP11-586D19.1	1	5	-0.067915
chr4	6202328	6206649	6204488	ENSG00000251408.1	+	lincRNA	KNOWN	RP11-586D19.2	1	2	-0.190044
chr4	6239441	6239937	6239689	ENSG00000269908.1	+	lincRNA	KNOWN	RP11-1406H17.1	1	1	-0.060860
chr4	6269849	6303265	6286557	ENSG00000109501.13	+	protein_coding	KNOWN	WFS1	6	8	0.415467
chr4	6320578	6563600	6442089	ENSG00000074211.13	-	protein_coding	KNOWN	PPP2R2C	9	10	0.278023
chr4	6575175	6623362	6599268	ENSG00000013288.8	+	protein_coding	KNOWN	MAN2B2	5	19	0.592097
chr4	6640091	6642745	6641418	ENSG00000179010.14	+	protein_coding	KNOWN	MRFAP1	5	3	0.326897
chr4	6670725	6673830	6672277	ENSG00000251580.1	-	lincRNA	KNOWN	RP11-539L10.3	2	2	0.509149
chr4	6673451	6676047	6674749	ENSG00000170846.16	+	lincRNA	KNOWN	AC093323.3	3	2	0.509149
chr4	6687448	6690519	6688983	ENSG00000246526.2	-	lincRNA	KNOWN	RP11-539L10.2	1	3	0.490594
chr4	6691995	6692970	6692482	ENSG00000279859.2	-	TEC	KNOWN	RP11-539L10.4	2	1	0.399565
chr4	6693069	6697170	6695119	ENSG00000163993.6	+	protein_coding	KNOWN	S100P	2	2	0.399565
chr4	6697861	6698809	6698335	ENSG00000282742.1	-	TEC	KNOWN	RP11-539L10.5	1	1	0.399565
chr4	6707701	6709880	6708790	ENSG00000178988.10	-	protein_coding	KNOWN	MRFAP1L1	2	2	0.399565
chr4	6716055	6717671	6716863	ENSG00000186222.4	+	protein_coding	KNOWN	BLOC1S4	1	1	0.208050
chr4	6781375	6884170	6832772	ENSG00000170871.11	+	protein_coding	KNOWN	KIAA0232	5	10	0.320786
chr4	6909242	7033118	6971180	ENSG00000132405.18	+	protein_coding	KNOWN	TBC1D14	9	14	0.495307
chr4	6995341	6998958	6997149	ENSG00000187904.3	+	sense_overlapping	KNOWN	AC097382.5	1	2	0.498151
chr4	6997012	6997328	6997170	ENSG00000202392.1	+	misc_RNA	KNOWN	RN7SKP292	1	1	0.498151
chr4	6997526	6997626	6997576	ENSG00000265550.1	+	miRNA	NOVEL	AC097382.1	1	1	0.498151
chr4	7030554	7046231	7038392	ENSG00000245748.1	-	antisense	KNOWN	RP11-367J11.2	1	4	0.579856
chr4	7040849	7042939	7041894	ENSG00000173013.5	-	protein_coding	KNOWN	CCDC96	1	1	0.579856
chr4	7041899	7057952	7049925	ENSG00000173011.11	+	protein_coding	KNOWN	TADA2B	5	2	0.661602
chr4	7058906	7068197	7063551	ENSG00000109519.12	-	protein_coding	KNOWN	GRPEL1	4	4	0.744858
chr4	7094571	7103385	7098978	ENSG00000245468.3	-	lincRNA	KNOWN	RP11-367J11.3	3	3	0.290537
chr4	7112088	7112399	7112243	ENSG00000200867.1	-	misc_RNA	KNOWN	RN7SKP36	1	1	0.366614
chr4	7192538	7742836	7467687	ENSG00000184985.16	+	protein_coding	KNOWN	SORCS2	4	27	0.442728
chr4	7310450	7310524	7310487	ENSG00000264658.1	+	miRNA	KNOWN	MIR4798	1	1	0.405556
chr4	7324128	7324186	7324157	ENSG00000275916.1	-	miRNA	NOVEL	AC080003.1	1	1	0.405556
chr4	7432258	7434945	7433601	ENSG00000178597.5	-	protein_coding	KNOWN	PSAPL1	1	1	0.390650
chr4	7460028	7460118	7460073	ENSG00000266690.1	+	miRNA	KNOWN	MIR4274	1	1	0.854786
chr4	7754090	7778928	7766509	ENSG00000272620.1	+	antisense	KNOWN	AFAP1-AS1	1	2	0.625578
chr4	7758714	7939926	7849320	ENSG00000196526.10	-	protein_coding	KNOWN	AFAP1	10	18	0.543430
chr4	7939001	7940296	7939648	ENSG00000228919.5	+	lincRNA	KNOWN	AC097381.1	2	1	0.209229
chr4	7965310	8158832	8062071	ENSG00000163995.18	-	protein_coding	KNOWN	ABLIM2	16	23	0.578632
chr4	8005301	8005381	8005341	ENSG00000207807.1	-	miRNA	KNOWN	MIR95	1	1	0.825656
chr4	8022665	8023126	8022895	ENSG00000273267.1	+	antisense	KNOWN	RP11-338K13.1	1	1	0.639086
chr4	8066528	8067724	8067126	ENSG00000251460.1	+	antisense	KNOWN	RP11-1258F18.1	1	2	0.449148
chr4	8174421	8174999	8174710	ENSG00000250471.2	+	processed_pseudogene	KNOWN	GMPSP1	1	1	0.784288
chr4	8182072	8241803	8211937	ENSG00000125089.16	+	protein_coding	KNOWN	SH3TC1	25	18	0.801354
chr4	8200662	8200719	8200690	ENSG00000276852.1	+	miRNA	NOVEL	AC104650.1	1	1	0.935873
chr4	8215292	8216501	8215896	ENSG00000281359.1	-	protein_coding	KNOWN	AC104650.2	1	3	0.799637
chr4	8269765	8307111	8288438	ENSG00000170801.9	+	protein_coding	KNOWN	HTRA3	2	9	0.743946
chr4	8320176	8323863	8322019	ENSG00000249145.1	+	lincRNA	KNOWN	RP11-774O3.2	1	2	0.694028
chr4	8320279	8323965	8322122	ENSG00000248986.1	+	lincRNA	KNOWN	RP11-774O3.1	1	4	0.694028
chr4	8355090	8358338	8356714	ENSG00000251615.3	-	lincRNA	KNOWN	RP11-774O3.3	1	1	0.679731
chr4	8366282	8440723	8403502	ENSG00000087008.15	-	protein_coding	KNOWN	ACOX3	8	18	0.717558
chr4	8393015	8393124	8393069	ENSG00000202054.1	+	rRNA	KNOWN	RNA5SP152	1	1	0.743327
chr4	8436140	8493531	8464835	ENSG00000155275.18	+	protein_coding	KNOWN	TRMT44	9	11	0.408027
chr4	8453410	8454942	8454176	ENSG00000251186.1	-	antisense	KNOWN	RP11-689P11.3	1	2	0.347249
chr4	8482270	8512610	8497440	ENSG00000205959.3	+	lincRNA	KNOWN	RP11-689P11.2	2	4	0.258938
chr4	8558725	8619761	8589243	ENSG00000155269.11	+	protein_coding	KNOWN	GPR78	7	14	0.493638
chr4	8592660	8619759	8606209	ENSG00000109625.18	+	protein_coding	KNOWN	CPZ	9	11	0.572261
chr4	8745397	8746033	8745715	ENSG00000250915.1	-	lincRNA	KNOWN	RP11-1338A24.1	1	2	0.358593
chr4	8846076	8871817	8858946	ENSG00000215612.6	-	protein_coding	KNOWN	HMX1	3	14	0.214871
chr4	8858715	8860827	8859771	ENSG00000258507.1	-	sense_intronic	KNOWN	RP13-582L3.4	1	2	0.243995
chr4	8949630	8950559	8950094	ENSG00000197468.5	+	unprocessed_pseudogene	KNOWN	RP11-747H12.1	1	1	-0.034353
chr4	8959628	8963981	8961804	ENSG00000249272.1	+	unprocessed_pseudogene	KNOWN	UNC93B8	1	3	-0.045512
chr4	8981436	8982360	8981898	ENSG00000250804.1	+	unprocessed_pseudogene	KNOWN	RP11-747H12.3	1	1	0.261312
chr4	8990455	8990806	8990630	ENSG00000249347.1	+	processed_pseudogene	KNOWN	RP11-747H12.4	1	1	0.022386
chr4	9020857	9021161	9021009	ENSG00000271057.1	-	processed_pseudogene	KNOWN	RP11-747H12.7	1	1	0.246912
chr4	9023333	9023480	9023406	ENSG00000238726.1	-	miRNA	NOVEL	AC073648.1	1	1	0.246912
chr4	9030286	9031066	9030676	ENSG00000251313.1	+	processed_pseudogene	KNOWN	RP11-747H12.5	1	1	-0.071294
chr4	9051842	9052051	9051946	ENSG00000250342.1	-	processed_pseudogene	KNOWN	SNRPCP16	1	1	-0.176497
chr4	9079023	9141608	9110315	ENSG00000249767.1	+	unprocessed_pseudogene	KNOWN	ENPP7P10	1	3	0.202231
chr4	9153296	9165451	9159373	ENSG00000163612.10	+	unprocessed_pseudogene	KNOWN	FAM86KP	1	8	0.495714
chr4	9166297	9170270	9168283	ENSG00000250268.3	-	unprocessed_pseudogene	KNOWN	ALG1L14P	1	4	0.502111
chr4	9168229	9168294	9168261	ENSG00000264372.1	-	miRNA	NOVEL	AC108519.1	1	1	0.495714
chr4	9170409	9176730	9173569	ENSG00000229924.3	+	protein_coding	KNOWN	FAM90A26	1	7	0.589491
chr4	9210657	9212608	9211632	ENSG00000231396.2	+	protein_coding	KNOWN	USP17L10	2	3	0.003011
chr4	9215405	9217356	9216380	ENSG00000233136.2	+	protein_coding	KNOWN	USP17L11	2	3	0.003011
chr4	9220152	9221744	9220948	ENSG00000227551.1	+	protein_coding	KNOWN	USP17L12	1	1	0.003011
chr4	9224896	9226847	9225871	ENSG00000232399.3	+	protein_coding	KNOWN	USP17L13	2	3	0.003011
chr4	9229641	9231233	9230437	ENSG00000249482.1	+	unprocessed_pseudogene	KNOWN	USP17L14P	1	1	0.116919
chr4	9234385	9365080	9299732	ENSG00000223569.5	+	protein_coding	KNOWN	USP17L15	3	2	0.071365
chr4	9239130	9240722	9239926	ENSG00000250231.1	+	unprocessed_pseudogene	KNOWN	USP17L16P	1	1	0.149965
chr4	9243879	9245830	9244854	ENSG00000249104.2	+	protein_coding	KNOWN	USP17L17	2	3	0.149965
chr4	9248630	9250581	9249605	ENSG00000250844.2	+	protein_coding	KNOWN	USP17L18	2	3	0.165869
chr4	9253378	9255329	9254353	ENSG00000248920.2	+	protein_coding	KNOWN	USP17L19	2	3	0.203280
chr4	9258124	9260075	9259099	ENSG00000250745.2	+	protein_coding	KNOWN	USP17L20	2	3	0.203280
chr4	9262872	9264823	9263847	ENSG00000249811.2	+	protein_coding	KNOWN	USP17L21	2	3	0.203280
chr4	9267619	9269570	9268594	ENSG00000248933.2	+	protein_coding	KNOWN	USP17L22	2	3	0.203280
chr4	9272364	9272914	9272639	ENSG00000250913.2	+	protein_coding	KNOWN	USP17L23	1	1	0.102831
chr4	9325165	9327116	9326140	ENSG00000232264.4	+	protein_coding	KNOWN	USP17L24	2	3	0.000000
chr4	9329911	9331862	9330886	ENSG00000230430.4	+	protein_coding	KNOWN	USP17L25	2	3	-0.048953
chr4	9334658	9336609	9335633	ENSG00000229579.4	+	protein_coding	KNOWN	USP17L26	2	3	-0.051265
chr4	9339403	9340995	9340199	ENSG00000227140.3	+	protein_coding	KNOWN	USP17L5	1	1	-0.051265
chr4	9344148	9345740	9344944	ENSG00000235780.3	+	protein_coding	KNOWN	USP17L27	1	1	-0.051265
chr4	9348893	9350485	9349689	ENSG00000231051.3	+	protein_coding	KNOWN	USP17L28	1	1	0.002613
chr4	9353638	9355230	9354434	ENSG00000231637.3	+	protein_coding	KNOWN	USP17L29	1	1	0.125225
chr4	9358383	9359975	9359179	ENSG00000251694.1	+	unprocessed_pseudogene	KNOWN	USP17L9P	1	1	0.125225
chr4	9363129	9364721	9363925	ENSG00000228856.3	+	protein_coding	KNOWN	USP17L30	1	1	0.125225
chr4	9367874	9369070	9368472	ENSG00000205946.1	+	unprocessed_pseudogene	KNOWN	USP17L6P	1	1	0.125225
chr4	9384017	9388983	9386500	ENSG00000219492.4	-	unprocessed_pseudogene	KNOWN	RP11-1396O13.13	1	5	0.021488
chr4	9399204	9403565	9401384	ENSG00000188438.4	+	unprocessed_pseudogene	KNOWN	RP11-1396O13.14	1	2	-0.022974
chr4	9411178	9411253	9411215	ENSG00000252307.1	-	rRNA	KNOWN	RNA5SP153	1	1	-0.455909
chr4	9422313	9429702	9426007	ENSG00000232773.2	+	unprocessed_pseudogene	KNOWN	RP11-1396O13.15	1	2	-0.455909
chr4	9444534	9450514	9447524	ENSG00000186146.1	+	protein_coding	KNOWN	DEFB131	1	2	-0.499579
chr4	9459255	9460244	9459749	ENSG00000248364.1	+	unprocessed_pseudogene	KNOWN	OR7E86P	1	1	-0.177527
chr4	9470968	9471055	9471011	ENSG00000266246.1	+	miRNA	NOVEL	AC097493.1	1	1	0.008736
chr4	9483718	9484702	9484210	ENSG00000250884.1	+	unprocessed_pseudogene	KNOWN	OR7E85P	1	1	0.008736
chr4	9493736	9498066	9495901	ENSG00000251624.1	+	unprocessed_pseudogene	KNOWN	UNC93B7	1	3	0.349290
chr4	9512905	9513874	9513389	ENSG00000249866.1	+	unprocessed_pseudogene	KNOWN	OR7E83P	1	1	0.153392
chr4	9521910	9522276	9522093	ENSG00000249443.1	+	processed_pseudogene	KNOWN	RP11-1396O13.22	1	1	0.153392
chr4	9553614	9553985	9553799	ENSG00000242034.1	-	processed_pseudogene	KNOWN	RP11-1396O13.1	1	1	-0.083505
chr4	9556168	9556316	9556242	ENSG00000221275.1	-	miRNA	KNOWN	MIR548I2	1	1	-0.083505
chr4	9563171	9563950	9563560	ENSG00000244004.1	+	processed_pseudogene	KNOWN	RP11-1396O13.2	1	1	-0.083505
chr4	9583942	9584131	9584036	ENSG00000249799.1	-	processed_pseudogene	KNOWN	SNRPCP13	1	1	-0.184020
chr4	9677308	9677934	9677621	ENSG00000250942.1	+	processed_pseudogene	KNOWN	ENPP7P11	1	1	-0.172424
chr4	9692495	9702954	9697724	ENSG00000186234.7	+	unprocessed_pseudogene	KNOWN	FAM86MP	1	8	0.114712
chr4	9703754	9710812	9707283	ENSG00000251087.3	-	unprocessed_pseudogene	KNOWN	ALG1L3P	1	8	0.117926
chr4	9711953	9712233	9712093	ENSG00000203436.2	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.142618
chr4	9733370	9742361	9737865	ENSG00000249563.1	+	unprocessed_pseudogene	KNOWN	RP11-751L19.1	1	4	-0.082613
chr4	9754898	9755778	9755338	ENSG00000250425.1	+	unprocessed_pseudogene	KNOWN	OR7E35P	1	1	-0.051372
chr4	9771153	10054936	9913044	ENSG00000109667.11	-	protein_coding	KNOWN	SLC2A9	13	14	-0.012352
chr4	9781680	9784009	9782844	ENSG00000169676.5	+	protein_coding	KNOWN	DRD5	1	1	0.024878
chr4	9792751	9792861	9792806	ENSG00000252002.1	-	rRNA	KNOWN	RNA5SP154	1	1	-0.350151
chr4	9922814	9924146	9923480	ENSG00000249219.1	+	antisense	KNOWN	RP13-560N11.1	1	2	0.114131
chr4	10006482	10009725	10008103	ENSG00000250413.1	+	antisense	KNOWN	RP11-448G15.1	1	2	0.070077
chr4	10068089	10073019	10070554	ENSG00000261490.1	-	sense_overlapping	KNOWN	RP11-448G15.3	1	2	0.230603
chr4	10074339	10116949	10095644	ENSG00000071127.16	-	protein_coding	KNOWN	WDR1	18	15	0.717619
chr4	10078611	10078692	10078651	ENSG00000264931.1	-	miRNA	KNOWN	MIR3138	1	1	0.372100
chr4	10115756	10115884	10115820	ENSG00000223086.1	-	rRNA	KNOWN	RNA5SP155	1	1	0.656121
chr4	10143367	10143655	10143511	ENSG00000250393.1	-	processed_pseudogene	KNOWN	RP11-480G3.1	1	1	0.419919
chr4	10167159	10167765	10167462	ENSG00000251296.1	-	processed_pseudogene	KNOWN	AC006499.7	1	1	0.232040
chr4	10199823	10200672	10200247	ENSG00000248777.1	-	processed_pseudogene	KNOWN	AC006499.6	1	1	0.342642
chr4	10238213	10238235	10238224	ENSG00000271544.1	-	processed_pseudogene	KNOWN	AC006499.9	1	1	-0.164348
chr4	10254926	10256621	10255773	ENSG00000250040.2	-	processed_pseudogene	KNOWN	RAF1P1	1	1	0.121436
chr4	10259445	10260138	10259791	ENSG00000250573.1	-	processed_pseudogene	KNOWN	AC006499.5	1	1	0.121436
chr4	10267895	10268231	10268063	ENSG00000250074.1	-	processed_pseudogene	KNOWN	AC006499.4	1	1	0.121436
chr4	10284961	10285708	10285334	ENSG00000250505.1	-	processed_pseudogene	KNOWN	AC006499.3	1	1	0.200516
chr4	10292195	10292708	10292451	ENSG00000251278.1	-	processed_pseudogene	KNOWN	AC006499.2	1	1	-0.172465
chr4	10294463	10295579	10295021	ENSG00000251338.1	-	processed_pseudogene	KNOWN	AC006499.1	1	1	-0.172465
chr4	10410996	10411644	10411320	ENSG00000250613.1	+	processed_pseudogene	KNOWN	RP11-136I13.1	1	2	-0.239214
chr4	10439874	10457410	10448642	ENSG00000178163.7	-	protein_coding	KNOWN	ZNF518B	5	3	0.021270
chr4	10478524	10478923	10478723	ENSG00000248419.2	-	processed_pseudogene	KNOWN	RP11-136I13.2	1	1	-0.418424
chr4	10486395	10684865	10585630	ENSG00000109684.14	-	protein_coding	KNOWN	CLNK	4	19	-0.133069
chr4	10581280	10581389	10581334	ENSG00000281045.1	+	miRNA	NOVEL	AC005599.1	1	1	0.037544
chr4	10685003	10697661	10691332	ENSG00000249334.1	+	lincRNA	KNOWN	RP11-61G19.1	1	3	-0.304419
chr4	10737572	10749586	10743579	ENSG00000283083.1	+	lincRNA	KNOWN	RP11-61G19.2	1	3	-0.320790
chr4	11368827	11368921	11368874	ENSG00000207716.1	+	miRNA	KNOWN	MIR572	1	1	-0.352793
chr4	11371975	11372892	11372433	ENSG00000250896.1	+	processed_pseudogene	KNOWN	RNPS1P1	1	1	-0.320556
chr4	11393150	11429765	11411457	ENSG00000002587.9	-	protein_coding	KNOWN	HS3ST1	3	2	-0.262384
chr4	11414051	11414160	11414105	ENSG00000222182.1	-	rRNA	KNOWN	RNA5SP156	1	1	-0.098231
chr4	11469250	11478196	11473723	ENSG00000251152.1	+	lincRNA	KNOWN	RP11-281P23.1	1	2	-0.569059
chr4	11625714	11813958	11719836	ENSG00000249631.5	+	lincRNA	KNOWN	RP11-281P23.2	6	5	-0.416307
chr4	11740948	11769468	11755208	ENSG00000248300.1	-	lincRNA	KNOWN	RP11-74M11.2	1	4	-0.631626
chr4	11914667	11919688	11917177	ENSG00000248262.1	+	lincRNA	KNOWN	RP11-1J7.1	1	2	-0.399397
chr4	12013347	12013441	12013394	ENSG00000266669.1	-	miRNA	NOVEL	AC097452.1	1	1	-0.713436
chr4	12223451	12251286	12237368	ENSG00000251210.5	+	lincRNA	KNOWN	RP11-168E17.1	2	4	-0.775434
chr4	12312588	12312690	12312639	ENSG00000212282.1	+	snRNA	KNOWN	RNU6-578P	1	1	-0.772125
chr4	12639086	12641009	12640047	ENSG00000249995.1	+	processed_pseudogene	KNOWN	ECM1P2	1	2	-0.171043
chr4	12640298	12640637	12640467	ENSG00000249780.1	-	processed_pseudogene	KNOWN	RP11-352E6.2	1	1	-0.171043
chr4	12797074	12797172	12797123	ENSG00000275277.1	+	miRNA	NOVEL	AC096750.1	1	1	-0.191462
chr4	12859101	12864961	12862031	ENSG00000250371.1	-	lincRNA	KNOWN	RP11-22A3.2	1	2	-0.574964
chr4	12947574	12948670	12948122	ENSG00000250098.1	-	lincRNA	KNOWN	RP11-22A3.1	1	2	-0.541581
chr4	13333414	13338657	13336035	ENSG00000205940.8	+	transcribed_processed_pseudogene	KNOWN	HSP90AB2P	2	4	0.034848
chr4	13361354	13484365	13422859	ENSG00000157869.14	-	protein_coding	KNOWN	RAB28	8	8	-0.218730
chr4	13526319	13534335	13530327	ENSG00000281202.2	-	lincRNA	KNOWN	LINC01097	3	4	-0.150640
chr4	13540830	13545050	13542940	ENSG00000109705.7	-	protein_coding	KNOWN	NKX3-2	1	2	0.166374
chr4	13546075	13547801	13546938	ENSG00000246095.2	-	lincRNA	KNOWN	LINC01096	2	2	0.166374
chr4	13568738	13627723	13598230	ENSG00000038219.12	-	protein_coding	KNOWN	BOD1L1	6	26	-0.185357
chr4	13627442	13627591	13627516	ENSG00000281620.1	+	protein_coding	KNOWN	AC006445.1	1	2	-0.096670
chr4	13627865	13627957	13627911	ENSG00000266240.1	+	miRNA	KNOWN	MIR5091	1	1	-0.096670
chr4	13631820	13632599	13632209	ENSG00000249148.2	-	processed_pseudogene	KNOWN	AC006445.7	1	2	-0.179035
chr4	13647697	13648400	13648048	ENSG00000242209.1	-	processed_pseudogene	KNOWN	AC006445.6	1	2	-0.179035
chr4	13655179	13977075	13816127	ENSG00000250634.5	+	lincRNA	KNOWN	LINC01182	2	5	-0.213495
chr4	13658627	13658713	13658670	ENSG00000281488.1	+	miRNA	NOVEL	AC098830.1	1	1	-0.041532
chr4	13777377	13782157	13779767	ENSG00000250497.1	-	lincRNA	KNOWN	AC007126.1	1	1	-0.265771
chr4	13977166	13978028	13977597	ENSG00000224569.3	+	processed_pseudogene	KNOWN	RP11-341G5.2	1	1	-0.105045
chr4	14111968	14140052	14126010	ENSG00000248698.5	+	lincRNA	KNOWN	LINC01085	4	4	-0.008326
chr4	14126339	14126664	14126501	ENSG00000251317.1	+	transcribed_processed_pseudogene	KNOWN	KLF17P2	1	1	0.100074
chr4	14134936	14143592	14139264	ENSG00000251679.1	+	lincRNA	KNOWN	RP11-669M16.2	1	3	-0.202751
chr4	14164455	14242813	14203634	ENSG00000249988.1	+	lincRNA	KNOWN	RP11-669M16.1	2	3	-0.181025
chr4	14383123	14409078	14396100	ENSG00000251412.1	-	lincRNA	KNOWN	AC006296.1	1	6	-0.039062
chr4	14390439	14393992	14392215	ENSG00000248425.1	+	lincRNA	KNOWN	AC006296.2	1	2	0.016890
chr4	14470465	14888169	14679317	ENSG00000248360.7	-	lincRNA	KNOWN	LINC00504	4	7	-0.395935
chr4	14505865	14506480	14506172	ENSG00000251252.1	-	processed_pseudogene	KNOWN	MTND2P31	1	1	-0.826394
chr4	14690710	14690832	14690771	ENSG00000202449.1	+	snoRNA	NOVEL	SNORA63	1	1	-0.174288
chr4	14909961	15002045	14956003	ENSG00000247624.6	-	lincRNA	KNOWN	CPEB2-AS1	2	8	-0.438919
chr4	15002674	15070153	15036413	ENSG00000137449.15	+	protein_coding	KNOWN	CPEB2	9	12	-0.231894
chr4	15004942	15427914	15216428	ENSG00000249252.5	-	antisense	KNOWN	RP11-665G4.1	2	6	-0.096792
chr4	15093767	15094094	15093930	ENSG00000199420.1	-	misc_RNA	KNOWN	RN7SKP170	1	1	-0.246331
chr4	15339818	15446166	15392992	ENSG00000163145.12	+	protein_coding	KNOWN	C1QTNF7	7	4	0.007228
chr4	15358141	15420032	15389086	ENSG00000251379.1	-	antisense	KNOWN	RP11-484O2.1	1	4	0.074554
chr4	15469865	15601557	15535711	ENSG00000048342.15	+	protein_coding	KNOWN	CC2D2A	17	38	0.099203
chr4	15492729	15492972	15492850	ENSG00000249930.1	-	processed_pseudogene	KNOWN	AC007016.3	1	1	0.075409
chr4	15563698	15564253	15563975	ENSG00000273133.1	-	antisense	KNOWN	RP11-799M12.2	1	1	0.066901
chr4	15604539	15681679	15643109	ENSG00000118564.14	-	protein_coding	KNOWN	FBXL5	13	12	-0.059778
chr4	15681662	15705565	15693613	ENSG00000237765.6	+	protein_coding	KNOWN	FAM200B	23	4	0.196056
chr4	15702950	15738313	15720631	ENSG00000109743.10	+	protein_coding	KNOWN	BST1	5	10	0.222053
chr4	15730962	15731627	15731294	ENSG00000214846.4	-	processed_pseudogene	KNOWN	RP11-115L11.1	1	1	0.035724
chr4	15743196	15743582	15743389	ENSG00000248188.2	+	processed_pseudogene	KNOWN	RP11-442P12.2	1	1	0.035724
chr4	15778275	15853230	15815752	ENSG00000004468.12	+	protein_coding	KNOWN	CD38	5	8	-0.220154
chr4	15864938	15865940	15865439	ENSG00000251644.1	-	processed_pseudogene	KNOWN	HPRT1P1	1	3	-0.129087
chr4	15935569	15938740	15937154	ENSG00000137440.4	-	protein_coding	KNOWN	FGFBP1	1	3	0.032491
chr4	15960243	15969309	15964776	ENSG00000137441.7	-	protein_coding	KNOWN	FGFBP2	2	2	0.132864
chr4	15963076	16084378	16023727	ENSG00000007062.11	-	protein_coding	KNOWN	PROM1	20	28	-0.009033
chr4	16160505	16227410	16193957	ENSG00000169762.16	-	protein_coding	KNOWN	TAPT1	17	14	-0.178362
chr4	16178939	16183120	16181029	ENSG00000249234.1	+	antisense	KNOWN	RP11-452J21.2	1	2	-0.162054
chr4	16226685	16320140	16273412	ENSG00000263327.6	+	antisense	KNOWN	TAPT1-AS1	3	4	-0.069256
chr4	16256308	16256555	16256431	ENSG00000242358.1	-	processed_pseudogene	KNOWN	RPS21P4	1	1	-0.087558
chr4	16307456	16308167	16307811	ENSG00000248851.1	+	processed_pseudogene	KNOWN	AC006427.2	1	1	-0.189103
chr4	16360686	16397323	16379004	ENSG00000249506.3	-	transcribed_processed_pseudogene	KNOWN	ZEB2P1	2	3	-0.178452
chr4	16400430	16512187	16456308	ENSG00000248138.5	+	antisense	KNOWN	RP11-446J8.1	2	4	-0.086127
chr4	16501541	16898809	16700175	ENSG00000169744.12	-	protein_coding	KNOWN	LDB2	16	9	0.114871
chr4	16973275	17073903	17023589	ENSG00000249998.1	-	lincRNA	KNOWN	RP11-141E13.1	1	3	0.233336
chr4	17061878	17062165	17062021	ENSG00000251212.1	+	processed_pseudogene	KNOWN	MTND5P4	1	1	0.241002
chr4	17171757	17186059	17178908	ENSG00000250819.1	-	lincRNA	KNOWN	RP11-576E20.1	1	6	-0.100653
chr4	17320746	17320882	17320814	ENSG00000206780.1	-	snoRNA	NOVEL	SNORA75	1	1	-0.277582
chr4	17427696	17428274	17427985	ENSG00000215278.4	-	processed_pseudogene	KNOWN	RPS7P6	1	1	-0.237510
chr4	17460261	17512234	17486247	ENSG00000151552.11	-	protein_coding	KNOWN	QDPR	9	7	-0.030488
chr4	17515165	17527104	17521134	ENSG00000249581.2	+	protein_coding	KNOWN	CLRN2	1	3	-0.022179
chr4	17552117	17552752	17552434	ENSG00000249488.1	-	processed_pseudogene	KNOWN	NACAP5	1	1	-0.104073
chr4	17577192	17607972	17592582	ENSG00000002549.12	+	protein_coding	KNOWN	LAP3	11	13	0.022517
chr4	17587467	17614571	17601019	ENSG00000249502.1	-	antisense	KNOWN	AC006160.5	1	3	-0.059177
chr4	17614631	17634105	17624368	ENSG00000118579.11	+	protein_coding	KNOWN	MED28	5	6	0.016493
chr4	17629306	17781512	17705409	ENSG00000047662.4	-	protein_coding	KNOWN	FAM184B	1	18	-0.125222
chr4	17800655	17810758	17805706	ENSG00000163257.10	-	protein_coding	KNOWN	DCAF16	3	3	0.062163
chr4	17810902	17844862	17827882	ENSG00000109805.9	+	protein_coding	KNOWN	NCAPG	5	21	-0.251824
chr4	17841199	18021876	17931537	ENSG00000178177.14	-	protein_coding	KNOWN	LCORL	6	7	-0.453193
chr4	17911674	17912976	17912325	ENSG00000235413.3	+	processed_pseudogene	KNOWN	KRT18P63	1	2	-0.393435
chr4	18488062	18489508	18488785	ENSG00000251048.1	-	lincRNA	KNOWN	RP11-608B3.1	1	2	-0.521950
chr4	19098199	19098740	19098469	ENSG00000279918.1	+	TEC	KNOWN	AC006840.1	1	1	-0.110052
chr4	19172335	19456994	19314664	ENSG00000248238.1	-	lincRNA	KNOWN	RP11-3J1.1	1	3	-0.231949
chr4	19181814	19181856	19181835	ENSG00000251816.1	-	rRNA	KNOWN	RNA5SP157	1	1	-0.340968
chr4	19257951	19258337	19258144	ENSG00000279379.1	-	TEC	KNOWN	RP11-84N19.1	1	1	-0.370351
chr4	19455436	19909692	19682564	ENSG00000248515.1	+	lincRNA	KNOWN	RP11-608O21.1	1	4	-0.188106
chr4	19747179	19754591	19750885	ENSG00000249441.1	-	lincRNA	KNOWN	RP11-94H6.1	1	2	-0.250876
chr4	19813749	19814231	19813990	ENSG00000241612.1	+	processed_pseudogene	KNOWN	RP13-585F24.1	1	1	-0.258505
chr4	20037560	20037972	20037766	ENSG00000250611.1	-	processed_pseudogene	KNOWN	RP11-339D20.1	1	1	0.049557
chr4	20253260	20620561	20436910	ENSG00000145147.19	+	protein_coding	KNOWN	SLIT2	12	39	-0.206330
chr4	20392189	20394856	20393522	ENSG00000248228.1	+	sense_intronic	KNOWN	SLIT2-IT1	1	4	-0.764883
chr4	20528275	20528384	20528329	ENSG00000207732.1	+	miRNA	KNOWN	MIR218-1	1	1	-0.518441
chr4	20696282	20752907	20724594	ENSG00000163138.18	+	protein_coding	KNOWN	PACRGL	33	10	-0.274723
chr4	20728616	21948799	21338707	ENSG00000185774.14	-	protein_coding	KNOWN	KCNIP4	10	9	-0.414273
chr4	20766808	20767372	20767090	ENSG00000272995.1	+	antisense	KNOWN	RP11-362J17.1	1	1	-0.381939
chr4	21304542	21316485	21310513	ENSG00000250243.2	+	antisense	KNOWN	RP11-120A1.1	1	3	-0.595348
chr4	21582096	21613728	21597912	ENSG00000250092.2	+	antisense	KNOWN	RP11-556G22.3	1	4	-0.580653
chr4	21656511	21656869	21656690	ENSG00000242768.2	-	processed_pseudogene	KNOWN	RP11-556G22.1	1	1	-0.517218
chr4	21697450	21719026	21708238	ENSG00000248343.1	+	antisense	KNOWN	RP11-556G22.2	1	2	-0.371244
chr4	21843341	21853188	21848264	ENSG00000280650.1	-	lincRNA	KNOWN	KCNIP4-IT1	1	1	-0.538896
chr4	21949015	22330330	22139672	ENSG00000250039.3	+	antisense	KNOWN	RP11-17E2.2	1	4	-0.384571
chr4	22118983	22119089	22119036	ENSG00000239001.1	+	snRNA	KNOWN	RNU6-420P	1	1	-0.181459
chr4	22345071	22516054	22430562	ENSG00000152990.13	-	protein_coding	KNOWN	ADGRA3	13	19	-0.221456
chr4	22579041	22579146	22579093	ENSG00000273832.1	+	miRNA	NOVEL	AC098583.1	1	1	-0.744509
chr4	22594196	22594450	22594323	ENSG00000244538.1	+	processed_pseudogene	KNOWN	RP11-10G12.1	1	1	-0.198523
chr4	22607501	22611063	22609282	ENSG00000251516.1	+	unprocessed_pseudogene	KNOWN	RP11-10G12.2	1	4	-0.182309
chr4	22692914	22819575	22756244	ENSG00000249948.6	+	polymorphic_pseudogene	KNOWN	GBA3	7	6	-0.428529
chr4	22727375	22727950	22727662	ENSG00000237350.1	-	processed_pseudogene	KNOWN	CDC42P6	1	1	-0.441227
chr4	22997551	23056862	23027206	ENSG00000248837.5	+	lincRNA	KNOWN	RP11-412P11.1	3	4	-0.751668
chr4	23105502	23123487	23114494	ENSG00000249645.1	+	lincRNA	KNOWN	RP11-552M14.1	1	5	-0.485611
chr4	23234625	23285573	23260099	ENSG00000249547.1	-	lincRNA	KNOWN	RP11-453O5.1	1	2	-0.548311
chr4	23514940	23515284	23515112	ENSG00000251220.2	-	processed_pseudogene	KNOWN	RFPL4AP3	1	1	-0.608448
chr4	23560923	23768652	23664787	ENSG00000250137.1	+	antisense	KNOWN	RP11-380P13.1	2	2	-0.376986
chr4	23723262	23733579	23728420	ENSG00000251292.1	-	lincRNA	KNOWN	ERVH-1	1	4	-0.168488
chr4	23755041	23904089	23829565	ENSG00000109819.8	-	protein_coding	KNOWN	PPARGC1A	18	15	-0.282235
chr4	23779590	23782560	23781075	ENSG00000249453.1	+	antisense	KNOWN	RP13-497K6.1	1	3	-0.216557
chr4	24421176	24421301	24421238	ENSG00000222262.1	-	miRNA	NOVEL	AC092846.1	1	1	-0.074827
chr4	24517441	24584550	24550995	ENSG00000109606.12	-	protein_coding	KNOWN	DHX15	10	14	-0.271943
chr4	24520192	24520290	24520241	ENSG00000207697.1	-	miRNA	KNOWN	MIR573	1	1	-0.052780
chr4	24563193	24563461	24563327	ENSG00000243005.3	-	misc_RNA	KNOWN	RN7SL16P	1	1	-0.254333
chr4	24658072	24658375	24658223	ENSG00000249256.2	-	processed_pseudogene	KNOWN	ATP5LP3	1	1	0.208637
chr4	24659856	24671568	24665712	ENSG00000261121.1	+	lincRNA	KNOWN	RP11-496D24.2	1	2	0.179339
chr4	24768049	24768331	24768190	ENSG00000251638.1	+	processed_pseudogene	KNOWN	AC006390.4	1	1	-0.051133
chr4	24771467	24772420	24771943	ENSG00000248444.1	+	processed_pseudogene	KNOWN	HNRNPA1P65	1	1	0.170380
chr4	24789912	24800842	24795377	ENSG00000109610.5	+	protein_coding	KNOWN	SOD3	3	3	0.031704
chr4	24806117	24980204	24893160	ENSG00000181982.18	-	protein_coding	KNOWN	CCDC149	8	13	0.173955
chr4	24998847	25030879	25014863	ENSG00000153012.11	-	protein_coding	KNOWN	LGI2	2	8	-0.186610
chr4	25120014	25160442	25140228	ENSG00000109618.11	-	protein_coding	KNOWN	SEPSECS	7	12	-0.282318
chr4	25160641	25201440	25181040	ENSG00000281501.1	+	antisense	KNOWN	SEPSECS-AS1	2	2	-0.005078
chr4	25160663	25277306	25218984	ENSG00000281028.1	+	protein_coding	KNOWN	RP11-717K11.2	1	10	0.034338
chr4	25220403	25220913	25220658	ENSG00000271172.1	+	lincRNA	KNOWN	RP11-660M5.1	1	1	-0.146168
chr4	25233975	25279092	25256533	ENSG00000038210.12	+	protein_coding	KNOWN	PI4K2B	1	10	0.147817
chr4	25250545	25250639	25250592	ENSG00000278135.1	+	snRNA	NOVEL	U2	1	1	0.252456
chr4	25312785	25370383	25341584	ENSG00000168228.14	+	protein_coding	KNOWN	ZCCHC4	6	13	0.050319
chr4	25353970	25354071	25354020	ENSG00000264496.1	+	miRNA	NOVEL	AC108218.1	1	1	-0.313062
chr4	25377213	25418498	25397855	ENSG00000053900.10	+	protein_coding	KNOWN	ANAPC4	11	29	-0.366457
chr4	25472517	25473815	25473166	ENSG00000249320.1	+	processed_pseudogene	KNOWN	RP11-206P5.1	1	3	-0.174288
chr4	25504997	25506675	25505836	ENSG00000248608.2	+	processed_pseudogene	KNOWN	RP11-206P5.2	1	1	-0.191462
chr4	25598564	25598625	25598594	ENSG00000238632.1	-	snRNA	KNOWN	RNU7-126P	1	1	0.225017
chr4	25608711	25619468	25614089	ENSG00000248545.2	+	lincRNA	KNOWN	RP11-302F12.3	1	2	-0.046449
chr4	25622777	25623601	25623189	ENSG00000228154.3	+	processed_pseudogene	KNOWN	RP11-302F12.2	1	2	-0.083375
chr4	25655301	25678748	25667024	ENSG00000157765.11	+	protein_coding	KNOWN	SLC34A2	6	13	0.095926
chr4	25678850	25679020	25678935	ENSG00000242640.1	+	processed_pseudogene	KNOWN	RP11-302F12.1	1	1	0.049557
chr4	25686202	25686458	25686330	ENSG00000249277.1	-	processed_pseudogene	KNOWN	RP11-302F12.4	1	1	0.049557
chr4	25718082	25719745	25718913	ENSG00000250050.1	-	unprocessed_pseudogene	KNOWN	MTND4P9	1	2	-0.253144
chr4	25719755	25720030	25719892	ENSG00000248133.1	-	unprocessed_pseudogene	KNOWN	MTND4LP22	1	1	-0.253144
chr4	25720099	25720431	25720265	ENSG00000251353.1	-	unprocessed_pseudogene	KNOWN	MTND3P5	1	1	-0.253144
chr4	25720516	25721056	25720786	ENSG00000248654.1	-	unprocessed_pseudogene	KNOWN	RP11-302F12.5	1	1	-0.253144
chr4	25747427	25863760	25805593	ENSG00000091490.10	-	protein_coding	KNOWN	SEL1L3	13	24	0.191421
chr4	25770266	25773577	25771921	ENSG00000250541.1	+	antisense	KNOWN	RP11-302F12.10	1	2	0.164142
chr4	25861830	25929874	25895852	ENSG00000250317.8	+	protein_coding	KNOWN	SMIM20	5	4	0.222411
chr4	25864881	25869550	25867215	ENSG00000251009.2	-	lincRNA	KNOWN	RP13-494C23.1	1	2	0.288531
chr4	26111865	26113839	26112852	ENSG00000248452.2	+	processed_pseudogene	KNOWN	RP11-324H7.1	1	2	-0.093311
chr4	26163455	26435131	26299293	ENSG00000168214.20	+	protein_coding	KNOWN	RBPJ	31	12	0.174754
chr4	26481400	26490462	26485931	ENSG00000163394.5	-	protein_coding	KNOWN	CCKAR	1	5	0.089056
chr4	26576437	26755351	26665894	ENSG00000109680.10	+	protein_coding	KNOWN	TBC1D19	9	21	-0.195932
chr4	26637390	26637490	26637440	ENSG00000265627.1	-	miRNA	NOVEL	AC093807.1	1	1	-0.165396
chr4	26668020	26668119	26668069	ENSG00000281715.1	-	miRNA	NOVEL	AC093807.2	1	1	-0.340640
chr4	26702309	26702388	26702348	ENSG00000200999.1	+	snoRNA	NOVEL	SNORD74	1	1	-0.076827
chr4	26857678	27025381	26941529	ENSG00000109689.14	+	protein_coding	KNOWN	STIM2	10	13	-0.240144
chr4	26859806	26860599	26860202	ENSG00000240005.5	-	antisense	KNOWN	RP11-293A21.1	3	2	0.011373
chr4	26873561	26874349	26873955	ENSG00000248340.2	-	processed_pseudogene	KNOWN	RP11-293A21.2	1	2	-0.223104
chr4	27133996	27140051	27137023	ENSG00000251080.1	-	lincRNA	KNOWN	RP11-415C15.1	1	3	-0.201205
chr4	27207505	27218404	27212954	ENSG00000205830.1	-	lincRNA	KNOWN	AC024132.1	1	2	-0.365522
chr4	27217479	27282225	27249852	ENSG00000249699.1	+	lincRNA	KNOWN	RP11-415C15.2	1	6	-0.392191
chr4	27223319	27223427	27223373	ENSG00000222206.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.360520
chr4	27262506	27267254	27264880	ENSG00000251325.1	-	lincRNA	KNOWN	RP11-415C15.3	1	2	-0.348581
chr4	27585145	27586144	27585644	ENSG00000250858.1	+	processed_pseudogene	KNOWN	IGBP1P5	1	1	-0.272062
chr4	27967723	27985063	27976393	ENSG00000251410.1	-	lincRNA	KNOWN	AC007106.1	1	2	0.144634
chr4	28362279	28402864	28382571	ENSG00000250038.5	-	lincRNA	KNOWN	RP11-180C1.1	2	5	-0.190510
chr4	28435449	28600275	28517862	ENSG00000250064.1	+	lincRNA	KNOWN	RP11-123O22.1	1	4	-0.200133
chr4	28711198	28711476	28711337	ENSG00000243548.3	+	misc_RNA	KNOWN	RN7SL101P	1	1	-0.103559
chr4	28811500	28811667	28811583	ENSG00000281784.1	-	miRNA	NOVEL	AC096566.1	1	1	-0.163567
chr4	28823244	28824211	28823727	ENSG00000250927.1	-	processed_pseudogene	KNOWN	MESTP3	1	1	-0.163567
chr4	28996524	29014594	29005559	ENSG00000250190.1	+	lincRNA	KNOWN	RP11-292B1.2	1	3	-0.342622
chr4	29010619	29011021	29010820	ENSG00000276507.1	-	processed_pseudogene	KNOWN	RP11-769N22.2	1	1	-0.451943
chr4	29046591	29048765	29047678	ENSG00000249228.1	+	lincRNA	KNOWN	RP11-769N22.1	1	2	-0.388813
chr4	29118308	29202770	29160539	ENSG00000248176.1	+	lincRNA	KNOWN	RP11-472K22.1	1	3	-0.415279
chr4	29214398	29221162	29217780	ENSG00000248338.1	+	lincRNA	KNOWN	RP11-472K22.2	1	3	-0.757868
chr4	29407100	29408012	29407556	ENSG00000251373.1	+	processed_pseudogene	KNOWN	RP11-68D16.1	1	1	-0.234369
chr4	29465701	29467850	29466775	ENSG00000251113.2	-	processed_pseudogene	KNOWN	RP11-68D16.2	1	2	-0.125106
chr4	29748757	29750100	29749428	ENSG00000249542.2	+	processed_pseudogene	KNOWN	EEF1A1P21	1	1	-0.255175
chr4	29750196	29750310	29750253	ENSG00000212045.1	+	miRNA	NOVEL	AC109351.1	1	1	-0.443605
chr4	29907659	29907791	29907725	ENSG00000249564.1	-	processed_pseudogene	KNOWN	RP11-390C19.1	1	1	-0.584119
chr4	29962644	29963758	29963201	ENSG00000244031.3	-	processed_pseudogene	KNOWN	RPS3AP17	1	2	-0.708699
chr4	30006951	30008316	30007633	ENSG00000248281.1	-	processed_pseudogene	KNOWN	RP11-174E22.2	1	2	-0.263770
chr4	30720415	31146805	30933610	ENSG00000169851.15	+	protein_coding	KNOWN	PCDH7	8	4	-0.538212
chr4	30776257	30793970	30785113	ENSG00000249678.1	-	antisense	KNOWN	RP11-619J20.1	1	3	-0.463586
chr4	30884443	30885182	30884812	ENSG00000250624.1	-	unprocessed_pseudogene	KNOWN	RP11-93M12.1	1	1	-0.423773
chr4	31171144	31211675	31191409	ENSG00000251182.1	+	lincRNA	KNOWN	RP11-617I14.1	1	5	-0.311517
chr4	31349786	31349874	31349830	ENSG00000278814.1	-	miRNA	NOVEL	AC104071.1	1	1	-0.557321
chr4	31350284	31351725	31351004	ENSG00000251434.1	+	lincRNA	KNOWN	RP11-315A17.1	1	2	-0.410509
chr4	31506666	31558821	31532743	ENSG00000249882.1	+	lincRNA	KNOWN	RP11-665I14.1	1	3	-0.421434
chr4	31997397	32155406	32076401	ENSG00000251129.1	+	lincRNA	KNOWN	RP11-734I18.1	1	3	-0.529184
chr4	32351038	32353220	32352129	ENSG00000251329.1	+	lincRNA	KNOWN	RP11-240A16.1	1	2	-0.386471
chr4	33010948	33011746	33011347	ENSG00000250076.1	-	processed_pseudogene	KNOWN	RP11-141P6.1	1	1	-0.734677
chr4	33238239	33238670	33238454	ENSG00000249452.2	-	processed_pseudogene	KNOWN	RP11-638O6.1	1	1	-0.489179
chr4	33400538	33400679	33400608	ENSG00000249766.1	+	processed_pseudogene	KNOWN	RP11-802H3.1	1	1	-0.276048
chr4	33433510	33437877	33435693	ENSG00000248417.1	+	lincRNA	KNOWN	RP11-802H3.2	1	2	-0.584220
chr4	33536744	33536842	33536793	ENSG00000265035.1	+	miRNA	NOVEL	AC079772.1	1	1	-0.776364
chr4	33776347	34039893	33908120	ENSG00000250954.5	-	lincRNA	KNOWN	RP11-79E3.3	2	5	-0.481412
chr4	33850591	33979936	33915263	ENSG00000250723.5	+	lincRNA	KNOWN	RP11-79E3.2	4	4	-0.448445
chr4	33968174	33968526	33968350	ENSG00000239983.1	+	processed_pseudogene	KNOWN	RP11-79E3.1	1	1	0.131520
chr4	34120894	34269747	34195320	ENSG00000248685.5	-	lincRNA	KNOWN	RP11-548L20.1	2	4	-0.544111
chr4	34386754	34386837	34386795	ENSG00000263814.1	-	miRNA	NOVEL	AC093786.1	1	1	-0.310107
chr4	34657606	34669432	34663519	ENSG00000250597.5	+	lincRNA	KNOWN	RP11-725M22.1	3	4	-0.596064
chr4	34714270	34714598	34714434	ENSG00000275250.1	+	processed_pseudogene	KNOWN	RP11-768G3.1	1	1	-1.047171
chr4	34966241	34966344	34966292	ENSG00000238694.1	-	snoRNA	NOVEL	snoU13	1	1	-0.768845
chr4	35487812	35489750	35488781	ENSG00000250416.2	+	processed_pseudogene	KNOWN	SEC63P2	1	1	-0.473605
chr4	35495898	35496003	35495950	ENSG00000206665.1	+	snRNA	KNOWN	RNU6-573P	1	1	-0.423708
chr4	35948221	36244509	36096365	ENSG00000047365.11	-	protein_coding	KNOWN	ARAP2	10	33	-0.482672
chr4	36065060	36065726	36065393	ENSG00000248466.1	-	processed_pseudogene	KNOWN	RP11-640B6.1	1	1	-0.566971
chr4	36244116	36274220	36259168	ENSG00000247193.2	+	antisense	KNOWN	RP11-431M7.3	2	5	-0.333463
chr4	36281622	36345756	36313689	ENSG00000197057.8	+	protein_coding	KNOWN	DTHD1	5	9	-0.581631
chr4	36311190	36392410	36351800	ENSG00000251438.1	-	antisense	KNOWN	RP11-431M7.2	1	3	-0.549041
chr4	36496537	36641900	36569218	ENSG00000248215.5	-	lincRNA	KNOWN	RP11-722M1.1	3	6	-0.564997
chr4	36506043	36508869	36507456	ENSG00000251588.2	+	processed_pseudogene	KNOWN	RP11-698E18.1	1	1	-0.802299
chr4	37001816	37020708	37011262	ENSG00000261761.3	+	processed_transcript	KNOWN	RP11-103J17.2	2	2	-0.535267
chr4	37078577	37125424	37102000	ENSG00000247810.6	+	lincRNA	KNOWN	RP11-103J17.1	2	3	-0.597558
chr4	37241910	37241991	37241950	ENSG00000264319.1	-	miRNA	KNOWN	MIR4801	1	1	-0.570313
chr4	37244220	37449465	37346842	ENSG00000174145.7	+	protein_coding	KNOWN	NWD2	1	7	-0.405893
chr4	37453941	37623495	37538718	ENSG00000154274.14	+	protein_coding	KNOWN	C4orf19	3	4	-0.259246
chr4	37588087	37588875	37588481	ENSG00000248936.1	-	antisense	KNOWN	RP11-36B15.1	1	2	0.100307
chr4	37590800	37686376	37638588	ENSG00000181826.9	-	protein_coding	KNOWN	RELL1	3	7	0.018571
chr4	37699895	37700002	37699948	ENSG00000207075.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.340812
chr4	37781892	37781980	37781936	ENSG00000273527.1	+	miRNA	NOVEL	AC108022.1	1	1	-0.190942
chr4	37821361	37821838	37821599	ENSG00000239532.1	+	processed_pseudogene	KNOWN	RP11-9D8.1	1	1	-0.115604
chr4	37826633	37862937	37844785	ENSG00000169299.13	+	protein_coding	KNOWN	PGM2	6	14	-0.065505
chr4	37866561	37867091	37866826	ENSG00000279386.1	-	protein_coding	KNOWN	AC021106.1	1	1	-0.283300
chr4	37868292	37869978	37869135	ENSG00000249863.2	+	processed_pseudogene	KNOWN	RP11-177C12.1	1	2	-0.283300
chr4	37891087	38139175	38015131	ENSG00000065882.15	+	protein_coding	KNOWN	TBC1D1	19	21	0.081034
chr4	37960435	37961125	37960780	ENSG00000250254.1	+	protein_coding	KNOWN	PTTG2	1	1	0.154728
chr4	37995494	37996203	37995848	ENSG00000251332.1	-	processed_pseudogene	KNOWN	RP11-177C12.4	1	1	-0.004761
chr4	38006784	38007105	38006944	ENSG00000249649.1	-	processed_pseudogene	KNOWN	MRPS33P2	1	1	-0.004761
chr4	38089944	38090036	38089990	ENSG00000280678.1	-	miRNA	NOVEL	AC108933.1	1	1	0.152900
chr4	38238613	38238696	38238654	ENSG00000221495.1	+	miRNA	NOVEL	AC098680.1	1	1	0.045944
chr4	38286994	38287491	38287242	ENSG00000251642.1	+	lincRNA	KNOWN	RP11-600L4.1	1	2	-0.171043
chr4	38366914	38385759	38376336	ENSG00000248227.1	+	lincRNA	KNOWN	RP11-83C7.1	1	2	0.033751
chr4	38390754	38391675	38391214	ENSG00000280015.1	+	TEC	KNOWN	RP11-83C7.3	1	1	-0.334709
chr4	38420662	38523180	38471921	ENSG00000249534.1	-	lincRNA	KNOWN	LINC01258	1	8	-0.308333
chr4	38509767	38518056	38513911	ENSG00000249667.1	+	lincRNA	KNOWN	LINC01259	1	3	-0.475145
chr4	38564003	38570671	38567337	ENSG00000251635.1	+	lincRNA	KNOWN	RP11-213G21.2	1	3	-0.178467
chr4	38612701	38664883	38638792	ENSG00000231160.9	-	processed_transcript	KNOWN	KLF3-AS1	7	8	-0.132525
chr4	38618265	38619437	38618851	ENSG00000271958.1	-	lincRNA	KNOWN	RP11-617D20.2	1	2	-0.159927
chr4	38664196	38701042	38682619	ENSG00000109787.12	+	protein_coding	KNOWN	KLF3	3	6	0.129337
chr4	38758791	38758892	38758841	ENSG00000222230.1	-	rRNA	KNOWN	RNA5SP158	1	1	-0.077933
chr4	38772239	38782990	38777614	ENSG00000174123.10	-	protein_coding	KNOWN	TLR10	8	4	-0.184718
chr4	38790677	38856817	38823747	ENSG00000174125.7	-	protein_coding	KNOWN	TLR1	10	6	0.106665
chr4	38823715	38856817	38840266	ENSG00000174130.12	-	protein_coding	KNOWN	TLR6	5	3	0.116357
chr4	38859306	38859445	38859375	ENSG00000281018.1	+	miRNA	NOVEL	AC108044.1	1	1	-0.161765
chr4	38867677	38945739	38906708	ENSG00000197712.11	+	protein_coding	KNOWN	FAM114A1	6	15	0.449171
chr4	38868032	38868127	38868079	ENSG00000207944.1	+	miRNA	KNOWN	MIR574	1	1	-0.161765
chr4	38966744	39032922	38999833	ENSG00000121895.7	-	protein_coding	KNOWN	TMEM156	4	7	-0.009546
chr4	39045039	39126857	39085948	ENSG00000109790.16	+	protein_coding	KNOWN	KLHL5	7	12	0.087655
chr4	39112677	39126818	39119747	ENSG00000249207.1	-	antisense	KNOWN	RP11-360F5.1	1	4	0.338504
chr4	39133913	39135608	39134760	ENSG00000249685.1	+	lincRNA	KNOWN	RP11-360F5.3	1	2	0.333000
chr4	39182404	39285810	39234107	ENSG00000157796.17	+	protein_coding	KNOWN	WDR19	18	37	-0.004023
chr4	39287456	39366375	39326915	ENSG00000035928.14	-	protein_coding	KNOWN	RFC1	16	25	0.173333
chr4	39297605	39297711	39297658	ENSG00000206675.1	-	snRNA	KNOWN	RNU6-32P	1	1	0.425286
chr4	39399149	39399248	39399198	ENSG00000222592.1	+	snRNA	KNOWN	RNU6-887P	1	1	0.374800
chr4	39406853	39451536	39429194	ENSG00000134962.6	+	protein_coding	KNOWN	KLB	1	5	0.085638
chr4	39411910	39411974	39411942	ENSG00000264621.1	+	miRNA	KNOWN	MIR5591	1	1	-0.045512
chr4	39441665	39441764	39441714	ENSG00000238797.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.134056
chr4	39454124	39458948	39456536	ENSG00000163682.15	-	protein_coding	KNOWN	RPL9	11	8	0.570294
chr4	39459000	39477653	39468326	ENSG00000121897.13	+	protein_coding	KNOWN	LIAS	7	11	0.443048
chr4	39480255	39481905	39481080	ENSG00000224097.5	+	transcribed_processed_pseudogene	KNOWN	RP11-472B18.1	3	2	0.260192
chr4	39498755	39528311	39513533	ENSG00000109814.11	-	protein_coding	KNOWN	UGDH	12	12	0.420899
chr4	39528019	39594707	39561363	ENSG00000249348.1	+	antisense	KNOWN	UGDH-AS1	1	5	0.466889
chr4	39546330	39639090	39592710	ENSG00000163683.11	-	protein_coding	KNOWN	SMIM14	7	5	0.356269
chr4	39621012	39621073	39621042	ENSG00000252796.1	+	snRNA	KNOWN	RNU7-11P	1	1	-0.014923
chr4	39639140	39666644	39652892	ENSG00000255458.5	+	lincRNA	KNOWN	RP11-539G18.3	5	5	0.187907
chr4	39698044	39782792	39740418	ENSG00000078140.13	+	protein_coding	KNOWN	UBE2K	7	7	0.335287
chr4	39710085	39710176	39710130	ENSG00000252975.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.431478
chr4	39713842	39714451	39714146	ENSG00000249019.2	-	processed_pseudogene	KNOWN	RP11-539G18.1	1	2	0.431478
chr4	39761000	39761298	39761149	ENSG00000243260.3	+	misc_RNA	KNOWN	RN7SL558P	1	1	0.379154
chr4	39770081	39771371	39770726	ENSG00000180610.10	-	processed_pseudogene	KNOWN	ZBTB12P1	1	3	0.449314
chr4	39822863	39977956	39900409	ENSG00000121892.14	-	protein_coding	KNOWN	PDS5A	10	33	0.212204
chr4	39932454	39933561	39933007	ENSG00000271278.1	+	processed_pseudogene	KNOWN	TCEB1P33	1	3	0.149543
chr4	39936753	39936855	39936804	ENSG00000252970.1	+	rRNA	KNOWN	RNA5SP159	1	1	0.149543
chr4	39972741	39972797	39972769	ENSG00000275114.1	-	miRNA	NOVEL	AC098591.1	1	1	0.324653
chr4	39973128	39973442	39973285	ENSG00000250568.1	-	processed_pseudogene	KNOWN	RP11-333E13.2	1	1	0.324653
chr4	39973444	39974338	39973891	ENSG00000231707.4	+	processed_pseudogene	KNOWN	PABPC1P1	1	2	0.324653
chr4	40020240	40021517	40020878	ENSG00000249064.1	+	processed_pseudogene	KNOWN	KRT18P25	1	1	0.574385
chr4	40042917	40057199	40050058	ENSG00000205794.4	-	transcribed_processed_pseudogene	KNOWN	RP11-333E13.4	2	3	0.205679
chr4	40056826	40158252	40107539	ENSG00000078177.13	+	protein_coding	KNOWN	N4BP2	4	19	0.074836
chr4	40077884	40077982	40077933	ENSG00000200455.1	+	snRNA	KNOWN	RNU6-1112P	1	1	0.467031
chr4	40082983	40083106	40083044	ENSG00000201863.1	+	snoRNA	NOVEL	SNORA51	1	1	0.467031
chr4	40142198	40142365	40142281	ENSG00000248977.1	-	processed_pseudogene	KNOWN	RP11-395I6.1	1	1	-0.003692
chr4	40166675	40167831	40167253	ENSG00000260296.1	+	sense_overlapping	KNOWN	RP11-395I6.3	1	1	0.101773
chr4	40191053	40246967	40219010	ENSG00000168421.12	+	protein_coding	KNOWN	RHOH	24	5	0.094720
chr4	40265472	40266457	40265964	ENSG00000250338.1	+	lincRNA	KNOWN	RP11-395I6.2	1	2	0.346309
chr4	40316485	40330419	40323452	ENSG00000249241.1	+	lincRNA	KNOWN	AC195454.1	1	3	0.091743
chr4	40335329	40355217	40345273	ENSG00000174343.5	+	protein_coding	KNOWN	CHRNA9	3	5	0.125774
chr4	40377452	40377513	40377482	ENSG00000239010.1	-	snRNA	KNOWN	RNU7-74P	1	1	0.211044
chr4	40423267	40630875	40527071	ENSG00000163694.14	-	protein_coding	KNOWN	RBM47	15	7	0.123582
chr4	40426119	40427585	40426852	ENSG00000250893.1	+	antisense	KNOWN	RP11-588L15.2	1	2	0.430040
chr4	40463711	40463803	40463757	ENSG00000275251.1	+	miRNA	NOVEL	AC098869.1	1	1	-0.029753
chr4	40491733	40492024	40491878	ENSG00000242197.2	+	processed_pseudogene	KNOWN	RP11-588L15.1	1	1	0.216171
chr4	40502040	40502119	40502079	ENSG00000263642.1	-	miRNA	KNOWN	MIR4802	1	1	0.216171
chr4	40749897	40809985	40779941	ENSG00000179299.16	+	protein_coding	KNOWN	NSUN7	7	12	-0.059090
chr4	40786110	40786710	40786410	ENSG00000248780.1	+	processed_pseudogene	KNOWN	ARL4AP2	1	1	-0.035764
chr4	40810027	41216714	41013370	ENSG00000163697.16	-	protein_coding	KNOWN	APBB2	30	18	0.263705
chr4	40812779	40826151	40819465	ENSG00000250906.1	+	antisense	KNOWN	RP11-632F7.3	1	2	0.208715
chr4	40826655	40826765	40826710	ENSG00000207195.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.208715
chr4	40990154	40990273	40990213	ENSG00000201736.1	+	rRNA	KNOWN	RNA5SP160	1	1	0.265821
chr4	41084607	41084713	41084660	ENSG00000199790.1	+	snRNA	KNOWN	RNU6-836P	1	1	0.283651
chr4	41113942	41114045	41113993	ENSG00000207198.1	+	snRNA	KNOWN	RNU6-1195P	1	1	0.195370
chr4	41220074	41256727	41238400	ENSG00000251173.1	-	antisense	KNOWN	UCHL1-AS1	2	3	0.194890
chr4	41256413	41268455	41262434	ENSG00000154277.12	+	protein_coding	KNOWN	UCHL1	12	10	0.100166
chr4	41303237	41303337	41303287	ENSG00000207481.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.083114
chr4	41359607	41700044	41529825	ENSG00000064042.17	+	protein_coding	KNOWN	LIMCH1	22	32	-0.036258
chr4	41389115	41389593	41389354	ENSG00000239627.3	+	processed_pseudogene	KNOWN	RPL12P20	1	1	-0.027307
chr4	41688858	41692797	41690827	ENSG00000249216.1	-	antisense	KNOWN	RP11-227F19.5	1	3	-0.150858
chr4	41722538	41723512	41723025	ENSG00000249081.1	-	unprocessed_pseudogene	KNOWN	OR5M14P	1	2	0.044163
chr4	41744082	41748970	41746526	ENSG00000109132.6	-	protein_coding	KNOWN	PHOX2B	2	3	-0.222117
chr4	41748293	41824119	41786206	ENSG00000250467.1	+	antisense	KNOWN	RP11-227F19.1	1	5	-0.092963
chr4	41750345	41757341	41753843	ENSG00000249122.1	+	lincRNA	KNOWN	RP11-227F19.2	1	3	-0.057644
chr4	41771945	41772103	41772024	ENSG00000200338.1	-	snRNA	KNOWN	RNU1-49P	1	1	-0.218030
chr4	41794665	41794773	41794719	ENSG00000281235.1	-	miRNA	NOVEL	AC105389.1	1	1	0.134552
chr4	41842154	41843950	41843052	ENSG00000249745.1	-	processed_pseudogene	KNOWN	HMGB1P28	1	3	-0.116250
chr4	41876481	41882611	41879546	ENSG00000245870.2	-	lincRNA	KNOWN	LINC00682	3	2	0.028266
chr4	41883060	41894579	41888819	ENSG00000249771.1	-	lincRNA	KNOWN	RP11-457P14.5	1	3	0.083539
chr4	41924180	41924380	41924280	ENSG00000249887.1	+	processed_pseudogene	KNOWN	RP11-457P14.6	1	1	-0.218030
chr4	41935120	41960572	41947846	ENSG00000109133.12	+	protein_coding	KNOWN	TMEM33	8	8	-0.329609
chr4	41981696	41986467	41984081	ENSG00000182308.6	+	protein_coding	KNOWN	DCAF4L1	1	1	-0.288913
chr4	41988741	41989237	41988989	ENSG00000272862.1	-	lincRNA	KNOWN	RP11-814H16.2	1	1	-0.288913
chr4	41990472	42090457	42040464	ENSG00000014824.13	+	protein_coding	KNOWN	SLC30A9	5	19	-0.300270
chr4	42029209	42030123	42029666	ENSG00000249212.1	+	unprocessed_pseudogene	KNOWN	ATP1B1P1	1	1	-0.348321
chr4	42110938	42152878	42131908	ENSG00000188848.15	-	protein_coding	KNOWN	BEND4	3	6	-0.376544
chr4	42281830	42391268	42336549	ENSG00000250781.1	-	antisense	KNOWN	RP11-63A11.1	3	3	-0.116846
chr4	42397839	42402487	42400163	ENSG00000178343.4	+	protein_coding	KNOWN	SHISA3	1	2	0.002050
chr4	42408373	42657105	42532739	ENSG00000124406.16	-	protein_coding	KNOWN	ATP8A1	10	37	-0.313320
chr4	42445990	42446072	42446031	ENSG00000266058.1	+	miRNA	NOVEL	AC084010.1	1	1	-0.034385
chr4	42471810	42472380	42472095	ENSG00000240167.1	+	processed_pseudogene	KNOWN	RPS7P7	1	1	-0.291337
chr4	42561457	42562425	42561941	ENSG00000248283.2	-	processed_pseudogene	KNOWN	CCNL2P1	1	1	-0.323046
chr4	42657496	42657928	42657712	ENSG00000260519.1	+	antisense	KNOWN	RP11-109E24.2	1	1	-0.255107
chr4	42706107	42707335	42706721	ENSG00000251517.1	+	lincRNA	KNOWN	RP11-109E24.1	1	2	-0.246810
chr4	42892396	42892618	42892507	ENSG00000252595.1	+	misc_RNA	KNOWN	RN7SKP82	1	1	-0.205274
chr4	42893267	43030658	42961962	ENSG00000215203.2	+	protein_coding	KNOWN	GRXCR1	1	4	-0.300582
chr4	43133867	43234956	43184411	ENSG00000248939.1	+	lincRNA	KNOWN	RP11-395F4.1	1	5	-0.463885
chr4	43340875	43345600	43343237	ENSG00000250657.1	+	processed_transcript	KNOWN	RP11-1E6.1	2	5	-0.497075
chr4	43388157	43388437	43388297	ENSG00000277096.1	+	processed_pseudogene	KNOWN	RP11-324J13.3	1	1	-0.428015
chr4	43410041	43410937	43410489	ENSG00000213851.3	-	processed_pseudogene	KNOWN	RP11-324J13.1	1	1	-0.373300
chr4	43457527	43492543	43475035	ENSG00000248143.1	-	lincRNA	KNOWN	RP11-324J13.2	1	3	-0.649763
chr4	43586328	43588097	43587212	ENSG00000251501.1	+	processed_pseudogene	KNOWN	RP11-466J24.1	1	1	-0.557321
chr4	43598544	43598844	43598694	ENSG00000239464.3	-	misc_RNA	KNOWN	RN7SL691P	1	1	-0.558859
chr4	43863274	43863549	43863411	ENSG00000239679.3	+	misc_RNA	KNOWN	RN7SL193P	1	1	-0.383346
chr4	43898962	43899351	43899156	ENSG00000124399.4	+	processed_pseudogene	KNOWN	RP11-663P9.2	1	1	-0.485066
chr4	43980006	43981620	43980813	ENSG00000250863.1	-	lincRNA	KNOWN	RP11-663P9.1	1	2	-0.756005
chr4	44016861	44022063	44019462	ENSG00000251350.1	+	lincRNA	KNOWN	LVCAT1	2	2	-0.478896
chr4	44173909	44448807	44311358	ENSG00000183783.6	-	protein_coding	KNOWN	KCTD8	2	4	-0.529446
chr4	44299628	44299915	44299771	ENSG00000281514.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.510044
chr4	44448005	44448110	44448057	ENSG00000266496.1	+	miRNA	NOVEL	AC131951.1	1	1	-0.361726
chr4	44533615	44533880	44533747	ENSG00000251159.1	+	processed_pseudogene	KNOWN	RP11-500G9.1	1	1	-0.597940
chr4	44622065	44678556	44650310	ENSG00000177752.14	-	protein_coding	KNOWN	YIPF7	5	6	-0.525735
chr4	44678427	44700926	44689676	ENSG00000151806.13	+	protein_coding	KNOWN	GUF1	4	17	-0.292434
chr4	44682200	44726595	44704397	ENSG00000163281.11	-	protein_coding	KNOWN	GNPDA2	7	7	-0.430498
chr4	44693946	44694386	44694166	ENSG00000273369.1	-	antisense	KNOWN	RP11-700J17.1	1	1	-0.374789
chr4	44704405	44704965	44704685	ENSG00000272936.1	+	antisense	KNOWN	RP11-700J17.2	1	1	-0.374789
chr4	44840380	44841402	44840891	ENSG00000249729.2	-	processed_pseudogene	KNOWN	RP11-55C6.1	1	1	-0.350952
chr4	44944015	44944961	44944488	ENSG00000248987.2	-	processed_pseudogene	KNOWN	PRDX4P1	1	2	-0.686881
chr4	44994426	44996022	44995224	ENSG00000275959.1	+	processed_pseudogene	KNOWN	RP11-362I1.2	1	1	-0.368489
chr4	45009540	45051652	45030596	ENSG00000248744.1	+	lincRNA	KNOWN	RP11-362I1.1	1	6	-0.682502
chr4	45323253	45326028	45324640	ENSG00000248320.1	-	processed_pseudogene	KNOWN	PRKRIRP9	1	2	-0.840894
chr4	45414337	45414910	45414623	ENSG00000224560.3	-	processed_pseudogene	KNOWN	RP11-270L13.1	1	1	-0.341424
chr4	45480030	45480136	45480083	ENSG00000200720.1	+	snRNA	KNOWN	RNU6-931P	1	1	-0.225867
chr4	45995119	45995423	45995271	ENSG00000222257.1	+	misc_RNA	KNOWN	RN7SKP199	1	1	-0.406610
chr4	46035769	46124081	46079925	ENSG00000163285.7	-	protein_coding	KNOWN	GABRG1	1	9	-0.616718
chr4	46243548	46244215	46243881	ENSG00000260878.1	-	sense_overlapping	KNOWN	RP11-320H14.1	1	1	-0.475693
chr4	46248427	46475230	46361828	ENSG00000151834.15	-	protein_coding	KNOWN	GABRA2	16	11	-0.453722
chr4	46390255	46433188	46411721	ENSG00000249330.1	+	antisense	KNOWN	RP11-436F23.1	1	3	-0.325199
chr4	46531237	46531342	46531289	ENSG00000252243.1	-	snRNA	KNOWN	RNU6-412P	1	1	-0.436557
chr4	46723830	46724408	46724119	ENSG00000249936.3	-	processed_pseudogene	KNOWN	RAC1P2	1	1	-0.596064
chr4	46734827	46909235	46822031	ENSG00000170516.16	-	protein_coding	KNOWN	COX7B2	4	4	-0.457572
chr4	46918900	46994407	46956653	ENSG00000109158.10	-	protein_coding	KNOWN	GABRA4	5	9	-0.685459
chr4	46993723	47426444	47210083	ENSG00000163288.13	+	protein_coding	KNOWN	GABRB1	5	9	-0.413338
chr4	47431960	47438959	47435459	ENSG00000260918.1	+	sense_overlapping	KNOWN	RP11-731J8.2	1	1	-0.172771
chr4	47450796	47463719	47457257	ENSG00000169019.10	-	protein_coding	KNOWN	COMMD8	2	5	-0.335119
chr4	47463784	47470477	47467130	ENSG00000282904.1	+	bidirectional_promoter_lncrna	KNOWN	RP11-731J8.3	3	3	-0.322358
chr4	47485288	47593486	47539387	ENSG00000145246.13	+	protein_coding	KNOWN	ATP10D	7	23	-0.058869
chr4	47490967	47491471	47491219	ENSG00000242431.2	-	processed_pseudogene	KNOWN	RP11-731J8.1	1	1	-0.214255
chr4	47556731	47560259	47558495	ENSG00000248254.1	-	antisense	KNOWN	AC092597.3	1	3	0.034276
chr4	47593998	47838106	47716052	ENSG00000145244.11	-	protein_coding	KNOWN	CORIN	11	22	-0.121067
chr4	47652669	47652743	47652706	ENSG00000277388.1	+	miRNA	KNOWN	MIR8053	1	1	-0.235303
chr4	47706372	47706987	47706679	ENSG00000242262.1	+	processed_pseudogene	KNOWN	RP11-100N21.1	1	1	0.075872
chr4	47831385	47896709	47864047	ENSG00000282917.1	+	antisense	KNOWN	RP11-121C2.3	2	3	0.014208
chr4	47840122	47844339	47842230	ENSG00000259959.1	-	lincRNA	KNOWN	RP11-121C2.2	1	1	0.213554
chr4	47847233	47914667	47880950	ENSG00000170448.11	-	protein_coding	KNOWN	NFXL1	8	24	-0.067633
chr4	47914142	48040173	47977157	ENSG00000163293.11	+	protein_coding	KNOWN	NIPAL1	6	6	-0.118563
chr4	47935977	48016672	47976324	ENSG00000198515.13	-	protein_coding	KNOWN	CNGA1	9	11	-0.127842
chr4	47976216	47976327	47976271	ENSG00000221764.1	+	miRNA	NOVEL	AC107068.1	1	1	-0.407579
chr4	48066393	48134256	48100324	ENSG00000074966.10	-	protein_coding	KNOWN	TXK	6	15	-0.091359
chr4	48106081	48106188	48106134	ENSG00000200269.1	-	snRNA	KNOWN	RNU6-838P	1	1	0.091992
chr4	48135783	48269864	48202823	ENSG00000135605.12	-	protein_coding	KNOWN	TEC	5	18	-0.098482
chr4	48153434	48153535	48153484	ENSG00000202014.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.063610
chr4	48341322	48426212	48383767	ENSG00000109171.14	+	protein_coding	KNOWN	SLAIN2	5	8	-0.051773
chr4	48483343	48489196	48486269	ENSG00000145248.6	+	protein_coding	KNOWN	SLC10A4	1	3	0.294036
chr4	48490252	48494389	48492320	ENSG00000182223.7	+	protein_coding	KNOWN	ZAR1	1	4	0.135846
chr4	48497361	48780322	48638841	ENSG00000075539.13	-	protein_coding	KNOWN	FRYL	19	64	-0.118398
chr4	48574453	48574520	48574486	ENSG00000251722.1	-	snRNA	KNOWN	RNU5E-3P	1	1	-0.251963
chr4	48805212	48861817	48833514	ENSG00000109180.14	+	protein_coding	KNOWN	OCIAD1	28	9	-0.106789
chr4	48852008	48860203	48856105	ENSG00000248256.1	-	antisense	KNOWN	OCIAD1-AS1	1	2	-0.236241
chr4	48885019	48906937	48895978	ENSG00000145247.11	-	protein_coding	KNOWN	OCIAD2	10	7	-0.227933
chr4	48932755	48932854	48932804	ENSG00000252913.1	-	snRNA	KNOWN	RNU6-158P	1	1	-0.063463
chr4	48936582	48936880	48936731	ENSG00000251334.2	+	processed_pseudogene	KNOWN	RP11-317G22.2	1	1	-0.063463
chr4	48986247	49062081	49024164	ENSG00000109182.11	+	protein_coding	KNOWN	CWH43	5	16	-0.264480
chr4	49016682	49017154	49016918	ENSG00000225455.3	-	processed_pseudogene	KNOWN	TPI1P4	1	1	-0.060011
chr4	49197203	49197284	49197243	ENSG00000222437.1	+	miRNA	NOVEL	AC118282.3	1	1	-0.287889
chr4	49198015	49198097	49198056	ENSG00000221747.1	+	miRNA	NOVEL	AC118282.2	1	1	-0.287889
chr4	49198207	49198289	49198248	ENSG00000221415.1	+	miRNA	NOVEL	AC118282.1	1	1	-0.287889
chr4	49203171	49203726	49203448	ENSG00000249828.2	-	processed_pseudogene	KNOWN	RP11-1281K21.2	1	1	-0.287889
chr4	49209372	49209448	49209410	ENSG00000281200.1	+	miRNA	NOVEL	AC118282.4	1	1	-0.287889
chr4	49212251	49212624	49212437	ENSG00000249079.1	-	processed_pseudogene	KNOWN	RP11-1281K21.3	1	1	0.007295
chr4	49229573	49231284	49230428	ENSG00000280043.1	+	TEC	KNOWN	RP11-1281K21.8	1	1	-0.074070
chr4	49233289	49233965	49233627	ENSG00000250016.2	-	processed_pseudogene	KNOWN	SNX18P23	1	1	-0.101044
chr4	49238032	49245419	49241725	ENSG00000237961.4	-	processed_pseudogene	KNOWN	RP11-1281K21.1	1	4	-0.101044
chr4	49246021	49246538	49246279	ENSG00000268736.1	+	processed_pseudogene	KNOWN	RP11-1281K21.6	1	1	-0.101044
chr4	49246601	49246915	49246758	ENSG00000248946.2	+	processed_pseudogene	KNOWN	RP11-1281K21.7	1	2	-0.101044
chr4	49486926	49489554	49488240	ENSG00000248583.1	-	unprocessed_pseudogene	KNOWN	RP11-241F15.1	1	3	0.000000
chr4	49502145	49506022	49504083	ENSG00000251056.1	-	unprocessed_pseudogene	KNOWN	ANKRD20A17P	1	3	-0.608448
chr4	49507764	49508806	49508285	ENSG00000250769.2	-	processed_pseudogene	KNOWN	RP11-241F15.3	1	3	-0.608448
chr4	49523648	49523857	49523752	ENSG00000248532.2	-	processed_pseudogene	KNOWN	RP11-241F15.5	1	1	-0.173000
chr4	49524030	49524185	49524107	ENSG00000269848.1	-	processed_pseudogene	KNOWN	RP11-1281K21.9	1	1	-0.173000
chr4	49548564	49548855	49548709	ENSG00000268967.1	-	processed_pseudogene	KNOWN	RP11-1281K21.10	1	2	-0.353754
chr4	49548918	49549435	49549176	ENSG00000268391.1	-	processed_pseudogene	KNOWN	RP11-241F15.6	1	1	-0.353754
chr4	49550032	49557400	49553716	ENSG00000232471.3	+	unprocessed_pseudogene	KNOWN	RP11-241F15.7	1	4	-0.468414
chr4	49561285	49561470	49561377	ENSG00000251630.1	-	processed_pseudogene	KNOWN	RP11-241F15.9	1	1	-0.468414
chr4	49561479	49562149	49561814	ENSG00000251539.1	+	processed_pseudogene	KNOWN	SNX18P24	1	1	-0.468414
chr4	49579833	49580189	49580011	ENSG00000250753.2	+	processed_pseudogene	KNOWN	RP11-241F15.10	1	1	-0.133721
chr4	49583025	49583101	49583063	ENSG00000280630.1	-	miRNA	NOVEL	AC119751.5	1	1	-0.133721
chr4	49588772	49589529	49589150	ENSG00000249337.2	+	processed_pseudogene	KNOWN	SNX18P25	1	1	-0.133721
chr4	49595610	49595692	49595651	ENSG00000221075.1	-	miRNA	NOVEL	AC119751.1	1	1	-0.104405
chr4	49598423	49598505	49598464	ENSG00000221334.1	-	miRNA	NOVEL	AC119751.3	1	1	-0.104405
chr4	49598615	49598697	49598656	ENSG00000221082.1	-	miRNA	NOVEL	AC119751.2	1	1	-0.104405
chr4	49599428	49599509	49599468	ENSG00000223099.1	-	miRNA	NOVEL	AC119751.4	1	1	-0.104405
chr4	51843000	51916837	51879918	ENSG00000109184.14	+	protein_coding	KNOWN	DCUN1D4	22	12	-0.077429
chr4	51865050	51865535	51865292	ENSG00000250473.1	-	processed_pseudogene	KNOWN	DUTP7	1	1	0.251988
chr4	51918772	51919381	51919076	ENSG00000272576.1	+	lincRNA	KNOWN	RP11-365H22.2	1	1	-0.447167
chr4	51978079	51978372	51978225	ENSG00000243929.1	-	processed_pseudogene	KNOWN	RP11-61F5.1	1	1	-0.005305
chr4	51993702	52017620	52005661	ENSG00000188993.3	-	protein_coding	KNOWN	LRRC66	1	4	-0.097703
chr4	52020706	52038482	52029594	ENSG00000163069.12	-	protein_coding	KNOWN	SGCB	3	6	-0.346361
chr4	52044805	52046954	52045879	ENSG00000251040.1	+	lincRNA	KNOWN	RP11-535C7.1	1	3	-0.229936
chr4	52051331	52097292	52074311	ENSG00000163071.10	+	protein_coding	KNOWN	SPATA18	10	13	-0.197465
chr4	52440494	52441535	52441014	ENSG00000251286.2	-	processed_pseudogene	KNOWN	RP11-588F10.1	1	1	-0.149826
chr4	52494849	52494952	52494900	ENSG00000199924.1	+	snRNA	KNOWN	RNU6-1252P	1	1	-0.395274
chr4	52590972	52659335	52625153	ENSG00000109189.12	-	protein_coding	KNOWN	USP46	9	11	0.011970
chr4	52659406	52661668	52660537	ENSG00000248866.1	+	lincRNA	KNOWN	USP46-AS1	1	2	-0.071833
chr4	52680609	52692649	52686629	ENSG00000260120.1	+	lincRNA	KNOWN	RP11-177B4.2	1	3	-0.094753
chr4	52712404	52720351	52716377	ENSG00000226950.6	+	processed_transcript	KNOWN	DANCR	5	4	0.061618
chr4	52712682	52712747	52712714	ENSG00000264585.1	+	miRNA	KNOWN	MIR4449	1	1	0.061618
chr4	52713249	52713370	52713309	ENSG00000212588.1	+	snoRNA	KNOWN	SNORA26	1	1	0.061618
chr4	52720081	52720831	52720456	ENSG00000248375.1	-	processed_pseudogene	KNOWN	RP11-177B4.1	1	1	0.061618
chr4	52722618	52751640	52737129	ENSG00000226887.7	-	protein_coding	KNOWN	ERVMER34-1	3	4	0.080494
chr4	52748137	52748259	52748198	ENSG00000212490.1	+	snoRNA	NOVEL	SNORA26	1	1	0.091992
chr4	52751147	52751212	52751179	ENSG00000266656.1	-	miRNA	NOVEL	AC104066.1	1	1	0.025266
chr4	52786537	52786638	52786587	ENSG00000199901.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.047044
chr4	52789994	52815464	52802729	ENSG00000250302.1	+	lincRNA	KNOWN	LINC01618	1	5	-0.074693
chr4	52862290	52866835	52864562	ENSG00000128045.6	+	protein_coding	KNOWN	RASL11B	3	4	0.142618
chr4	52872982	53366075	53119528	ENSG00000184178.15	-	protein_coding	KNOWN	SCFD2	4	9	0.023770
chr4	52945649	52958087	52951868	ENSG00000248115.1	+	antisense	KNOWN	RP11-752D24.2	3	3	0.001176
chr4	53265461	53265567	53265514	ENSG00000207385.1	-	snRNA	KNOWN	RNU6-310P	1	1	0.347249
chr4	53377643	53460861	53419252	ENSG00000145216.15	+	protein_coding	KNOWN	FIP1L1	13	18	-0.177668
chr4	53377839	54295272	53836555	ENSG00000282278.1	+	protein_coding	KNOWN	RP11-231C18.3	1	24	0.110748
chr4	53459301	53701405	53580353	ENSG00000072201.13	-	protein_coding	KNOWN	LNX1	9	11	0.161546
chr4	53496400	53549578	53522989	ENSG00000250930.5	+	antisense	KNOWN	LNX1-AS1	4	4	0.198041
chr4	53575713	53576387	53576050	ENSG00000173966.7	+	processed_pseudogene	KNOWN	RP11-18M17.1	1	1	0.187961
chr4	53592956	53604047	53598501	ENSG00000248494.1	+	sense_intronic	KNOWN	LNX1-AS2	2	2	-0.083580
chr4	53611608	53611689	53611648	ENSG00000274537.1	+	miRNA	NOVEL	AC095040.1	1	1	0.433549
chr4	53659208	53737156	53698182	ENSG00000249341.1	+	sense_intronic	KNOWN	RP11-317M11.1	2	4	0.269330
chr4	53899871	53916835	53908353	ENSG00000249706.1	+	sense_intronic	KNOWN	RP11-89B16.1	1	3	0.034021
chr4	53927499	53928138	53927818	ENSG00000250815.1	-	processed_pseudogene	KNOWN	RP11-89B16.2	1	1	0.091992
chr4	53986587	53987058	53986822	ENSG00000229585.4	-	processed_pseudogene	KNOWN	RPL21P44	1	1	0.374926
chr4	53997415	53997712	53997563	ENSG00000272650.1	-	lincRNA	KNOWN	RP11-571I18.4	1	1	0.026029
chr4	54009789	54064690	54037239	ENSG00000109220.10	-	protein_coding	KNOWN	CHIC2	4	6	-0.190335
chr4	54059597	54061210	54060403	ENSG00000269506.2	+	antisense	KNOWN	RP11-571I18.5	1	1	-0.222705
chr4	54076625	54076848	54076736	ENSG00000251105.1	+	processed_pseudogene	KNOWN	RP11-571I18.2	1	1	0.292904
chr4	54086926	54087783	54087354	ENSG00000250147.1	+	processed_pseudogene	KNOWN	MORF4L2P1	1	1	0.292904
chr4	54099523	54102505	54101014	ENSG00000180613.10	+	protein_coding	KNOWN	GSX2	5	2	0.461226
chr4	54221126	54221472	54221299	ENSG00000242670.1	+	processed_pseudogene	KNOWN	RP11-601I15.1	1	1	0.141460
chr4	54229097	54298247	54263672	ENSG00000134853.11	+	protein_coding	KNOWN	PDGFRA	10	23	0.141298
chr4	54273705	54273772	54273738	ENSG00000278059.1	+	miRNA	NOVEL	AC098587.1	1	1	0.091992
chr4	54332892	54355954	54344423	ENSG00000248184.1	+	lincRNA	KNOWN	RP11-231C18.1	1	2	0.073161
chr4	54376002	54376752	54376377	ENSG00000248518.1	+	lincRNA	KNOWN	RP11-231C18.2	1	2	0.002557
chr4	54440502	54446723	54443612	ENSG00000251264.1	-	lincRNA	KNOWN	RP11-545H22.1	1	4	-0.147584
chr4	54603211	54607131	54605171	ENSG00000250456.1	-	lincRNA	KNOWN	AC006552.1	1	2	-0.123737
chr4	54657918	54740715	54699316	ENSG00000157404.15	+	protein_coding	KNOWN	KIT	4	21	-0.049349
chr4	54836161	54845402	54840781	ENSG00000249727.1	-	lincRNA	KNOWN	RP11-273B19.2	1	2	-0.198401
chr4	54845568	54859241	54852404	ENSG00000251256.1	+	lincRNA	KNOWN	RP11-273B19.1	1	2	-0.121185
chr4	54943630	54956818	54950224	ENSG00000248317.1	+	lincRNA	KNOWN	RP11-463H12.2	1	3	-0.076819
chr4	54976159	54976371	54976265	ENSG00000244422.3	-	processed_pseudogene	KNOWN	RPL38P3	1	1	0.009055
chr4	55010833	55010932	55010882	ENSG00000264332.1	-	miRNA	NOVEL	AC111194.1	1	1	-0.343318
chr4	55031965	55032071	55032018	ENSG00000252815.1	-	snRNA	KNOWN	RNU6-410P	1	1	-0.423650
chr4	55053060	55092534	55072797	ENSG00000250646.1	+	antisense	KNOWN	RP11-530I17.1	1	4	-0.356535
chr4	55063738	55064026	55063882	ENSG00000244034.3	+	misc_RNA	KNOWN	RN7SL424P	1	1	-0.314433
chr4	55078477	55125589	55102033	ENSG00000128052.8	-	protein_coding	KNOWN	KDR	3	30	-0.198310
chr4	55215624	55215919	55215771	ENSG00000239545.3	-	misc_RNA	KNOWN	RN7SL822P	1	1	-0.586080
chr4	55219344	55219973	55219658	ENSG00000250812.2	+	processed_pseudogene	KNOWN	RP11-530I17.2	1	1	-0.586080
chr4	55294490	55294598	55294544	ENSG00000206839.1	+	snRNA	KNOWN	RNU6-746P	1	1	-0.378150
chr4	55313011	55313924	55313467	ENSG00000250464.1	-	processed_pseudogene	KNOWN	LRRC34P2	1	2	-0.089178
chr4	55346109	55373096	55359602	ENSG00000128039.10	+	protein_coding	KNOWN	SRD5A3	3	5	0.211265
chr4	55351812	55352408	55352110	ENSG00000251111.2	-	processed_pseudogene	KNOWN	FCF1P8	1	1	0.295275
chr4	55363971	55395847	55379909	ENSG00000249700.8	-	processed_transcript	KNOWN	SRD5A3-AS1	27	8	0.217029
chr4	55387949	55388271	55388110	ENSG00000273257.1	+	lincRNA	KNOWN	RP11-177J6.1	1	1	0.170943
chr4	55395957	55453397	55424677	ENSG00000134851.12	+	protein_coding	KNOWN	TMEM165	12	7	0.081982
chr4	55412636	55412738	55412687	ENSG00000239040.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.055162
chr4	55427903	55547138	55487520	ENSG00000134852.14	-	protein_coding	KNOWN	CLOCK	11	24	-0.053815
chr4	55501595	55501708	55501651	ENSG00000238585.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.048381
chr4	55540502	55540835	55540668	ENSG00000223305.1	-	misc_RNA	KNOWN	RN7SKP30	1	1	0.005577
chr4	55547112	55547889	55547500	ENSG00000272969.1	+	antisense	KNOWN	RP11-528I4.2	1	1	0.005577
chr4	55556525	55592212	55574368	ENSG00000163440.10	-	protein_coding	KNOWN	PDCL2	2	7	-0.137463
chr4	55595229	55636698	55615963	ENSG00000109255.11	-	protein_coding	KNOWN	NMU	6	10	-0.155657
chr4	55798636	55798731	55798683	ENSG00000251923.1	+	snRNA	KNOWN	RNU6-276P	1	1	-0.348581
chr4	55820003	55837382	55828692	ENSG00000250821.1	+	lincRNA	KNOWN	RP11-345F18.1	1	3	-0.574240
chr4	55853616	55905034	55879325	ENSG00000090989.17	+	protein_coding	KNOWN	EXOC1	8	19	-0.188853
chr4	55885595	55885701	55885648	ENSG00000202358.1	+	snRNA	KNOWN	RNU6-652P	1	1	-0.302540
chr4	55929982	55930073	55930027	ENSG00000222954.1	+	miRNA	NOVEL	AC110611.1	1	1	0.009970
chr4	55948871	56033363	55991117	ENSG00000174799.10	+	protein_coding	KNOWN	CEP135	5	26	-0.131381
chr4	56049073	56328625	56188849	ENSG00000109265.12	+	protein_coding	KNOWN	KIAA1211	7	11	-0.242815
chr4	56097390	56097504	56097447	ENSG00000200741.1	+	rRNA	KNOWN	RNA5SP161	1	1	-0.285078
chr4	56097422	56097481	56097451	ENSG00000280464.1	+	miRNA	NOVEL	AC092627.1	1	1	-0.285078
chr4	56288485	56288584	56288534	ENSG00000252489.1	-	snRNA	KNOWN	RNU6-197P	1	1	-0.251082
chr4	56320719	56321334	56321026	ENSG00000250324.2	-	processed_pseudogene	KNOWN	MRPL22P1	1	1	0.132864
chr4	56338287	56387508	56362897	ENSG00000157426.13	-	protein_coding	KNOWN	AASDH	10	15	-0.133142
chr4	56356135	56356932	56356533	ENSG00000242083.2	+	processed_pseudogene	KNOWN	RPL7AP31	1	1	-0.275984
chr4	56387625	56388153	56387889	ENSG00000269921.1	+	lincRNA	KNOWN	RP11-646I6.5	1	1	0.016704
chr4	56393362	56435615	56414488	ENSG00000128059.8	-	protein_coding	KNOWN	PPAT	5	11	-0.071746
chr4	56396312	56396871	56396591	ENSG00000270147.1	+	lincRNA	KNOWN	RP11-646I6.6	1	1	-0.204250
chr4	56435741	56464579	56450160	ENSG00000128050.8	+	protein_coding	KNOWN	PAICS	8	10	0.029907
chr4	56466915	56503680	56485297	ENSG00000174780.15	+	protein_coding	KNOWN	SRP72	5	19	0.014644
chr4	56505343	56524448	56514895	ENSG00000196503.2	+	protein_coding	KNOWN	ARL9	1	4	-0.143530
chr4	56530609	56603507	56567058	ENSG00000249693.2	+	protein_coding	KNOWN	THEGL	2	9	-0.167651
chr4	56593004	56595681	56594342	ENSG00000248590.2	+	transcribed_processed_pseudogene	KNOWN	GLDCP1	1	1	-0.281823
chr4	56647988	56681899	56664943	ENSG00000171476.21	-	protein_coding	KNOWN	HOPX	15	5	0.059037
chr4	56662469	56665694	56664081	ENSG00000280285.1	-	TEC	KNOWN	RP11-630A13.4	1	1	0.069152
chr4	56710060	56710614	56710337	ENSG00000241250.1	+	processed_pseudogene	KNOWN	RPL17P20	1	1	-0.021665
chr4	56760919	56761485	56761202	ENSG00000227040.4	-	processed_pseudogene	KNOWN	RP11-533F5.2	1	1	0.083771
chr4	56794348	56794642	56794495	ENSG00000240545.3	-	misc_RNA	KNOWN	RN7SL492P	1	1	0.041660
chr4	56794354	56794438	56794396	ENSG00000281241.1	-	miRNA	NOVEL	AC022483.1	1	1	0.041660
chr4	56805834	56806131	56805982	ENSG00000265894.2	+	misc_RNA	KNOWN	RN7SL357P	1	1	0.041660
chr4	56809860	56821742	56815801	ENSG00000128040.10	-	protein_coding	KNOWN	SPINK2	7	4	0.033869
chr4	56810422	56810681	56810551	ENSG00000278226.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.033777
chr4	56818218	56818314	56818266	ENSG00000251799.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.033777
chr4	56907876	56935844	56921860	ENSG00000084093.15	+	protein_coding	KNOWN	REST	9	5	0.328439
chr4	56960927	56961373	56961150	ENSG00000269949.1	-	lincRNA	KNOWN	RP11-738E22.3	1	1	0.343910
chr4	56963370	56978823	56971096	ENSG00000084092.6	-	protein_coding	KNOWN	NOA1	1	7	0.254396
chr4	56977722	57031168	57004445	ENSG00000047315.14	+	protein_coding	KNOWN	POLR2B	12	26	0.186344
chr4	57002692	57002792	57002742	ENSG00000251703.1	+	snRNA	KNOWN	RNU6-998P	1	1	0.489869
chr4	57030773	57110385	57070579	ENSG00000163453.11	-	protein_coding	KNOWN	IGFBP7	3	5	0.139300
chr4	57072683	57073132	57072907	ENSG00000250384.1	+	processed_pseudogene	KNOWN	UBE2CP3	1	1	0.361690
chr4	57109762	57205510	57157636	ENSG00000245067.6	+	antisense	KNOWN	IGFBP7-AS1	3	5	0.086920
chr4	57154577	57156452	57155514	ENSG00000250192.1	+	lincRNA	KNOWN	RP11-300M6.1	1	3	0.048923
chr4	57352999	57353329	57353164	ENSG00000243920.2	-	processed_pseudogene	KNOWN	RPS26P24	1	1	0.185101
chr4	57425872	57465986	57445929	ENSG00000248505.1	+	lincRNA	KNOWN	RP11-319E12.1	1	6	-0.374491
chr4	57491390	57495233	57493311	ENSG00000251459.1	+	lincRNA	KNOWN	RP11-319E12.2	1	2	-0.306558
chr4	57595940	57605872	57600906	ENSG00000251049.2	-	lincRNA	KNOWN	RP11-685F15.1	1	2	-0.185789
chr4	57605694	57658800	57632247	ENSG00000250333.1	-	lincRNA	KNOWN	RP11-4O3.1	1	3	-0.423549
chr4	57720035	57724655	57722345	ENSG00000249831.2	+	lincRNA	KNOWN	RP11-4O3.2	1	2	-0.081340
chr4	58103147	58103434	58103290	ENSG00000248660.1	+	processed_pseudogene	KNOWN	SRIP1	1	1	-0.551216
chr4	58117758	58118070	58117914	ENSG00000249105.2	-	processed_pseudogene	KNOWN	RP11-25L5.2	1	1	-0.676061
chr4	58524515	58536328	58530421	ENSG00000250340.1	-	lincRNA	KNOWN	RP11-577G20.1	1	3	-0.654571
chr4	58562165	58565122	58563643	ENSG00000250078.1	-	lincRNA	KNOWN	RP11-577G20.2	1	3	-0.908008
chr4	58780626	58984152	58882389	ENSG00000251339.5	-	lincRNA	KNOWN	RP11-506N2.1	4	5	-0.569267
chr4	58984282	59046959	59015620	ENSG00000251266.1	+	lincRNA	KNOWN	RP11-340A13.2	2	3	-0.658495
chr4	58987182	58988160	58987671	ENSG00000249382.2	-	processed_transcript	KNOWN	RP11-340A13.1	3	3	-0.879249
chr4	59047020	59075256	59061138	ENSG00000250375.2	-	lincRNA	KNOWN	RP11-340A13.3	1	3	-0.624392
chr4	59152834	59176146	59164490	ENSG00000249111.1	+	lincRNA	KNOWN	RP11-622J8.1	1	2	-0.463818
chr4	59533786	59533898	59533842	ENSG00000199780.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.885288
chr4	59551142	59630324	59590733	ENSG00000249392.1	-	lincRNA	KNOWN	RP11-725D20.1	1	6	-0.607935
chr4	59767816	59792114	59779965	ENSG00000249892.1	-	lincRNA	KNOWN	RP11-525J21.1	1	4	-0.628500
chr4	59833175	59833276	59833225	ENSG00000201676.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.384911
chr4	59834063	59834167	59834115	ENSG00000201775.1	+	snRNA	KNOWN	RNU6-1325P	1	1	-0.384911
chr4	60038269	60038586	60038427	ENSG00000283043.1	+	processed_pseudogene	KNOWN	RP11-284H12.1	1	1	-0.948880
chr4	60663949	60664038	60663993	ENSG00000216027.1	-	miRNA	NOVEL	AC095061.1	1	1	-0.899075
chr4	60750586	60789999	60770292	ENSG00000249066.1	+	lincRNA	KNOWN	RP11-593F5.2	1	3	-0.131128
chr4	60784115	60784696	60784405	ENSG00000248237.2	+	processed_pseudogene	KNOWN	RP11-593F5.1	1	1	-0.171043
chr4	60922619	60922684	60922651	ENSG00000265829.1	+	miRNA	KNOWN	MIR548AG1	1	1	-0.458205
chr4	61143656	61153962	61148809	ENSG00000240152.2	+	lincRNA	KNOWN	RP11-16N2.1	2	4	-0.344102
chr4	61201258	62078335	61639796	ENSG00000150471.15	+	protein_coding	KNOWN	ADGRL3	19	26	-0.440267
chr4	61211652	61212203	61211927	ENSG00000241261.1	+	processed_pseudogene	KNOWN	RPL17P19	1	1	-0.263103
chr4	61420246	61428221	61424233	ENSG00000205682.2	-	lincRNA	KNOWN	RP11-798L4.1	1	3	-0.669069
chr4	61775449	61775850	61775649	ENSG00000226439.3	-	processed_pseudogene	KNOWN	RP11-621K7.1	1	1	-0.019654
chr4	61906313	61906408	61906360	ENSG00000202169.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.253605
chr4	62071752	62165554	62118653	ENSG00000248692.5	-	antisense	KNOWN	ADGRL3-AS1	4	9	-0.410685
chr4	62105660	62106049	62105854	ENSG00000225405.3	-	processed_pseudogene	KNOWN	RPS15AP17	1	1	-0.463824
chr4	62143542	62143634	62143588	ENSG00000273583.1	+	miRNA	NOVEL	AC007511.1	1	1	-0.276251
chr4	62248294	62248770	62248532	ENSG00000241344.1	+	processed_pseudogene	KNOWN	RPL21P47	1	1	-0.414361
chr4	62291562	62292337	62291949	ENSG00000250249.2	+	processed_pseudogene	KNOWN	RP11-30P21.2	1	2	-0.553343
chr4	62489495	62490218	62489856	ENSG00000248847.2	-	processed_pseudogene	KNOWN	RP11-26C10.1	1	1	-0.476683
chr4	62510469	62510771	62510620	ENSG00000248336.1	+	processed_pseudogene	KNOWN	HMGN1P11	1	1	-0.471534
chr4	62595377	62595462	62595419	ENSG00000265085.1	+	miRNA	NOVEL	AC110810.1	1	1	-0.570236
chr4	62816826	62818794	62817810	ENSG00000180673.9	+	processed_pseudogene	KNOWN	EXOC5P1	1	1	-0.623031
chr4	63128311	63143881	63136096	ENSG00000251055.2	+	lincRNA	KNOWN	RP11-257A22.1	1	3	-0.810234
chr4	63350114	63351472	63350793	ENSG00000231442.3	+	processed_pseudogene	KNOWN	LARP1BP1	1	1	-0.409069
chr4	63468701	63494278	63481489	ENSG00000250775.1	-	lincRNA	KNOWN	RP11-12K22.1	1	3	-0.386497
chr4	64275257	64409468	64342362	ENSG00000205678.7	-	protein_coding	KNOWN	TECRL	6	12	-0.634339
chr4	64397694	64397787	64397740	ENSG00000252104.1	-	snRNA	KNOWN	RNU6-191P	1	1	-0.560085
chr4	64430909	64433215	64432062	ENSG00000250768.1	+	processed_pseudogene	KNOWN	DPP3P1	1	2	-0.153484
chr4	64606418	64606613	64606515	ENSG00000251430.1	+	unprocessed_pseudogene	KNOWN	RP11-63H19.1	1	1	-0.636706
chr4	64607703	64608831	64608267	ENSG00000251385.2	-	processed_pseudogene	KNOWN	MTCYBP16	1	1	-0.636706
chr4	64608905	64609424	64609164	ENSG00000249893.1	+	unprocessed_pseudogene	KNOWN	MTND6P16	1	1	-0.636706
chr4	64609454	64610532	64609993	ENSG00000250169.1	-	processed_pseudogene	KNOWN	MTND5P13	1	1	-0.629856
chr4	64610616	64610909	64610762	ENSG00000248259.1	-	unprocessed_pseudogene	KNOWN	RP11-63H19.5	1	1	-0.622851
chr4	64610980	64611308	64611144	ENSG00000249045.1	-	unprocessed_pseudogene	KNOWN	RP11-63H19.8	1	1	-0.622851
chr4	64611374	64611888	64611631	ENSG00000248328.1	-	unprocessed_pseudogene	KNOWN	RP11-63H19.6	1	1	-0.622851
chr4	64767130	64767897	64767513	ENSG00000244669.1	-	processed_pseudogene	KNOWN	RP11-158O16.1	1	1	-0.439455
chr4	64914281	65004500	64959390	ENSG00000250125.1	-	lincRNA	KNOWN	RP11-707A18.1	1	7	-0.703306
chr4	65034634	65036017	65035325	ENSG00000248447.2	-	processed_pseudogene	KNOWN	RP11-633G11.1	1	1	-0.615226
chr4	65142703	65145763	65144233	ENSG00000248998.2	-	processed_pseudogene	KNOWN	EFTUD1P2	1	5	-0.886635
chr4	65216616	65217433	65217024	ENSG00000249351.2	+	processed_pseudogene	KNOWN	RP11-498E11.2	1	1	-0.890521
chr4	65319563	65670495	65495029	ENSG00000145242.13	-	protein_coding	KNOWN	EPHA5	6	18	-0.672604
chr4	65573459	65574328	65573893	ENSG00000243199.1	+	processed_pseudogene	KNOWN	RP11-408P14.1	1	1	-0.543011
chr4	65669961	65698029	65683995	ENSG00000250846.6	+	lincRNA	KNOWN	EPHA5-AS1	3	4	-0.303662
chr4	65702202	65705553	65703877	ENSG00000248479.1	+	lincRNA	KNOWN	RP11-807H7.2	1	2	-0.737022
chr4	65807240	65807435	65807337	ENSG00000222765.1	-	snRNA	KNOWN	RNU2-40P	1	1	-0.398334
chr4	65858761	65860204	65859482	ENSG00000251527.1	+	lincRNA	KNOWN	RP11-51P8.1	1	2	-0.692840
chr4	65998846	66150012	66074429	ENSG00000249413.2	+	lincRNA	KNOWN	RP11-25H12.1	1	4	-0.458435
chr4	66003281	66016792	66010036	ENSG00000272304.1	+	lincRNA	KNOWN	RP11-19C24.1	1	2	-0.298356
chr4	66094142	66094526	66094334	ENSG00000236562.4	+	processed_pseudogene	KNOWN	RP11-396M11.1	1	1	-0.059016
chr4	66276824	66276928	66276876	ENSG00000221563.1	+	miRNA	KNOWN	MIR1269A	1	1	-0.302540
chr4	66431092	66431521	66431306	ENSG00000244099.1	+	processed_pseudogene	KNOWN	RPS23P3	1	1	-0.285482
chr4	66897262	66897371	66897316	ENSG00000252890.1	+	snRNA	KNOWN	RNU6-699P	1	1	-0.417373
chr4	67417305	67468251	67442778	ENSG00000250075.5	-	lincRNA	KNOWN	RP11-584P21.2	3	4	-0.394385
chr4	67429591	67429754	67429672	ENSG00000206629.1	-	snRNA	KNOWN	RNU1-63P	1	1	-0.181385
chr4	67439992	67440118	67440055	ENSG00000274759.1	+	rRNA	NOVEL	5S_rRNA	1	1	-0.450907
chr4	67446267	67446574	67446420	ENSG00000250030.2	+	processed_pseudogene	KNOWN	RP11-584P21.4	1	1	-0.450907
chr4	67468748	67545606	67507177	ENSG00000145241.10	-	protein_coding	KNOWN	CENPC	7	20	-0.197038
chr4	67558728	67607337	67583032	ENSG00000035720.7	+	protein_coding	KNOWN	STAP1	2	10	-0.219430
chr4	67607856	67610313	67609084	ENSG00000279464.1	-	TEC	KNOWN	RP11-17P16.1	1	1	-0.216218
chr4	67612652	67701179	67656915	ENSG00000033178.12	-	protein_coding	KNOWN	UBA6	6	33	-0.284463
chr4	67638177	67638359	67638268	ENSG00000270257.1	+	processed_pseudogene	KNOWN	RP11-17P16.2	1	1	-0.370114
chr4	67701280	68080952	67891116	ENSG00000248049.6	+	antisense	KNOWN	UBA6-AS1	7	8	-0.341752
chr4	67716375	67717388	67716881	ENSG00000250656.2	-	processed_pseudogene	KNOWN	ST3GAL1P1	1	1	0.045198
chr4	67718996	67724262	67721629	ENSG00000270228.1	-	processed_pseudogene	KNOWN	RP11-453E17.3	1	5	0.045198
chr4	67725183	67726395	67725789	ENSG00000270292.1	-	processed_pseudogene	KNOWN	RP11-453E17.4	1	1	0.045198
chr4	67739328	67754360	67746844	ENSG00000109163.6	-	protein_coding	KNOWN	GNRHR	2	3	-0.208016
chr4	67747236	67747386	67747311	ENSG00000202374.1	+	snoRNA	NOVEL	SNORA62	1	1	-0.097203
chr4	67766480	67773854	67770167	ENSG00000232398.1	-	unprocessed_pseudogene	KNOWN	TMPRSS11CP	1	4	-0.590109
chr4	67820876	67884032	67852454	ENSG00000153802.11	-	protein_coding	KNOWN	TMPRSS11D	8	10	-0.282325
chr4	67909385	67964140	67936762	ENSG00000187054.14	-	protein_coding	KNOWN	TMPRSS11A	4	11	-0.386979
chr4	67991684	68015768	68003726	ENSG00000229009.7	-	transcribed_unprocessed_pseudogene	KNOWN	TMPRSS11GP	2	9	-0.471634
chr4	68003895	68004001	68003948	ENSG00000207428.1	+	snRNA	KNOWN	RNU6-95P	1	1	-0.497297
chr4	68038544	68039647	68039095	ENSG00000227725.3	+	processed_pseudogene	KNOWN	GCOM2	1	1	-0.240584
chr4	68053198	68129880	68091539	ENSG00000198092.5	-	protein_coding	KNOWN	TMPRSS11F	1	10	-0.511396
chr4	68061822	68063269	68062545	ENSG00000215127.6	-	transcribed_processed_pseudogene	KNOWN	SYT14P1	2	1	-0.577467
chr4	68182292	68212470	68197381	ENSG00000250426.2	+	transcribed_processed_pseudogene	KNOWN	FTLP10	2	3	-0.360478
chr4	68184081	68218080	68201080	ENSG00000250026.5	-	transcribed_unprocessed_pseudogene	KNOWN	TMPRSS11BNL	6	10	-0.374360
chr4	68226653	68245720	68236186	ENSG00000185873.7	-	protein_coding	KNOWN	TMPRSS11B	3	10	-0.482403
chr4	68282461	68285959	68284210	ENSG00000250642.3	-	unprocessed_pseudogene	KNOWN	RP11-642E20.5	1	3	-0.308249
chr4	68293127	68294364	68293745	ENSG00000248639.2	+	processed_pseudogene	KNOWN	RP11-642E20.2	1	2	-0.148271
chr4	68300325	68302459	68301392	ENSG00000249531.2	+	processed_pseudogene	KNOWN	RP11-642E20.3	1	2	-0.148271
chr4	68304343	68304939	68304641	ENSG00000248122.1	-	processed_pseudogene	KNOWN	APOOP4	1	1	-0.148271
chr4	68310387	68350089	68330238	ENSG00000083896.12	-	protein_coding	KNOWN	YTHDC1	7	17	-0.226125
chr4	68376323	68376505	68376414	ENSG00000162840.4	+	processed_pseudogene	KNOWN	MT2P1	1	1	0.091992
chr4	68447449	68497604	68472526	ENSG00000087128.9	+	protein_coding	KNOWN	TMPRSS11E	2	10	-0.502762
chr4	68509441	68517647	68513544	ENSG00000250566.1	-	unprocessed_pseudogene	KNOWN	UGT2B29P	1	2	-0.317377
chr4	68537184	68568527	68552855	ENSG00000197888.2	-	protein_coding	KNOWN	UGT2B17	1	6	-0.418988
chr4	68537413	68670628	68604020	ENSG00000196620.8	-	protein_coding	KNOWN	UGT2B15	2	7	-0.461426
chr4	68614419	68615013	68614716	ENSG00000249472.1	+	processed_pseudogene	KNOWN	RP11-1267H10.2	1	1	-0.431570
chr4	68615393	68616137	68615765	ENSG00000251101.1	-	processed_pseudogene	KNOWN	RP11-1267H10.1	1	1	-0.431570
chr4	68626847	68628899	68627873	ENSG00000251074.1	-	unprocessed_pseudogene	KNOWN	RP11-1267H10.3	1	2	-0.431570
chr4	68704600	68712498	68708549	ENSG00000248635.1	-	unprocessed_pseudogene	KNOWN	RP11-1267H10.4	1	4	-0.546649
chr4	68784618	68787474	68786046	ENSG00000250376.1	+	unprocessed_pseudogene	KNOWN	CTD-2005D20.1	1	4	-0.367440
chr4	68813995	68814727	68814361	ENSG00000251236.1	+	unprocessed_pseudogene	KNOWN	RP11-468N14.1	1	1	-0.317529
chr4	68815993	68831196	68823594	ENSG00000109181.11	+	protein_coding	KNOWN	UGT2B10	2	6	-0.354605
chr4	68834213	68834368	68834290	ENSG00000251424.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.3	1	1	-0.788427
chr4	68861332	68861610	68861471	ENSG00000249235.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.4	1	1	-0.526918
chr4	68877626	68880131	68878878	ENSG00000251529.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.5	1	2	-0.698780
chr4	68883885	68884440	68884162	ENSG00000248547.2	-	processed_pseudogene	KNOWN	RP11-468N14.6	1	1	-0.698780
chr4	68900651	68900910	68900780	ENSG00000248613.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.7	1	1	-0.386372
chr4	68901008	68906983	68903995	ENSG00000272626.1	-	lincRNA	KNOWN	RP11-468N14.13	1	2	-0.386372
chr4	68907918	68908034	68907976	ENSG00000249985.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.8	1	1	-0.386372
chr4	68914928	68924741	68919834	ENSG00000198277.6	-	unprocessed_pseudogene	KNOWN	RP11-468N14.09	1	4	-0.406997
chr4	68928463	68951791	68940127	ENSG00000135220.10	-	protein_coding	KNOWN	UGT2A3	2	7	-0.595938
chr4	68972999	68975993	68974496	ENSG00000251498.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.10	1	4	-0.752730
chr4	68985009	68988533	68986771	ENSG00000249735.1	-	unprocessed_pseudogene	KNOWN	RP11-468N14.12	1	3	-0.752730
chr4	68996935	68997709	68997322	ENSG00000250277.2	-	processed_pseudogene	KNOWN	RP11-468N14.11	1	1	-0.551315
chr4	69004618	69214731	69109674	ENSG00000213759.8	-	protein_coding	KNOWN	UGT2B11	4	7	-0.460940
chr4	69004862	69020414	69012638	ENSG00000251685.3	-	unprocessed_pseudogene	KNOWN	UGT2B27P	1	6	-0.451202
chr4	69021656	69022340	69021998	ENSG00000249890.1	-	unprocessed_pseudogene	KNOWN	RP11-813N20.2	1	1	-0.401823
chr4	69027831	69044578	69036204	ENSG00000250919.1	+	unprocessed_pseudogene	KNOWN	UGT2B26P	1	6	-0.370078
chr4	69051363	69112987	69082175	ENSG00000171234.13	+	protein_coding	KNOWN	UGT2B7	5	6	-0.438288
chr4	69066395	69069888	69068141	ENSG00000248763.2	+	unprocessed_pseudogene	KNOWN	RP13-644M16.5	1	3	-0.087987
chr4	69125274	69126451	69125862	ENSG00000251284.2	+	processed_pseudogene	KNOWN	RP13-644M16.1	1	1	-0.524093
chr4	69131351	69134814	69133082	ENSG00000250100.2	+	unprocessed_pseudogene	KNOWN	RP13-644M16.3	1	3	-0.576387
chr4	69144734	69147671	69146202	ENSG00000251427.1	+	unprocessed_pseudogene	KNOWN	RP13-644M16.2	1	4	-0.576387
chr4	69181660	69182372	69182016	ENSG00000196472.4	+	transcribed_unprocessed_pseudogene	KNOWN	RP13-644M16.4	1	1	-0.391687
chr4	69182100	69216766	69199433	ENSG00000250696.5	+	antisense	KNOWN	RP11-704M14.1	2	5	-0.434919
chr4	69215908	69216635	69216271	ENSG00000268803.1	-	unprocessed_pseudogene	KNOWN	RP11-704M14.2	1	1	-0.708071
chr4	69242628	69250815	69246721	ENSG00000249763.1	+	processed_pseudogene	KNOWN	RP11-618I10.1	1	5	-0.549171
chr4	69280487	69423402	69351944	ENSG00000135226.16	+	protein_coding	KNOWN	UGT2B28	3	7	-0.626323
chr4	69306469	69307173	69306821	ENSG00000251691.2	-	unprocessed_pseudogene	KNOWN	RP11-618I10.4	1	1	-0.871939
chr4	69346609	69358177	69352393	ENSG00000250612.2	+	processed_pseudogene	KNOWN	RP11-618I10.2	1	5	-0.664210
chr4	69387580	69388307	69387943	ENSG00000268209.1	+	unprocessed_pseudogene	KNOWN	RP11-618I10.3	1	1	-0.171043
chr4	69389492	69402081	69395786	ENSG00000215110.7	+	processed_pseudogene	KNOWN	UGT2B25P	1	6	-0.638417
chr4	69406931	69407655	69407293	ENSG00000248824.2	+	unprocessed_pseudogene	KNOWN	RP11-790I12.6	1	1	-0.658030
chr4	69408828	69423164	69415996	ENSG00000249956.4	+	processed_pseudogene	KNOWN	UGT2B24P	1	6	-0.791597
chr4	69437357	69441050	69439203	ENSG00000250828.2	+	unprocessed_pseudogene	KNOWN	RP11-790I12.3	1	3	-0.584220
chr4	69450014	69451613	69450813	ENSG00000249686.1	+	unprocessed_pseudogene	KNOWN	RP11-790I12.4	1	2	-0.617558
chr4	69479331	69479434	69479382	ENSG00000264696.1	+	miRNA	NOVEL	AC108078.1	1	1	-0.573024
chr4	69480165	69526014	69503089	ENSG00000156096.12	-	protein_coding	KNOWN	UGT2B4	6	6	-0.544204
chr4	69517667	69518400	69518033	ENSG00000248886.2	-	unprocessed_pseudogene	KNOWN	UGT2A3P7	1	1	-0.234236
chr4	69572391	69585527	69578959	ENSG00000251177.2	-	unprocessed_pseudogene	KNOWN	RP11-401E5.2	1	6	-0.546500
chr4	69588417	69653249	69620833	ENSG00000173610.12	-	protein_coding	KNOWN	UGT2A1	7	7	-0.559916
chr4	69589309	69639642	69614475	ENSG00000271271.5	-	protein_coding	KNOWN	UGT2A2	2	6	-0.547162
chr4	69721162	69787961	69754561	ENSG00000173597.8	-	protein_coding	KNOWN	SULT1B1	3	8	-0.520961
chr4	69791872	69813888	69802880	ENSG00000236959.1	-	unitary_pseudogene	KNOWN	SULT1D1P	1	7	-0.652689
chr4	69810780	69860152	69835466	ENSG00000109193.10	-	protein_coding	KNOWN	SULT1E1	3	8	-0.523175
chr4	69888877	69889406	69889141	ENSG00000251489.2	+	processed_pseudogene	KNOWN	RP11-736K12.1	1	1	-0.474708
chr4	69931081	69946574	69938827	ENSG00000126545.13	+	protein_coding	KNOWN	CSN1S1	6	16	-0.570973
chr4	69955256	69961007	69958131	ENSG00000135222.6	-	protein_coding	KNOWN	CSN2	1	7	-0.739131
chr4	69995930	70002570	69999250	ENSG00000126549.9	+	protein_coding	KNOWN	STATH	8	6	-0.443218
chr4	70020979	70021229	70021104	ENSG00000279857.1	-	protein_coding	KNOWN	AC063956.1	1	2	-0.567933
chr4	70028413	70036538	70032475	ENSG00000205649.7	+	protein_coding	KNOWN	HTN3	6	6	-0.597935
chr4	70050402	70058845	70054623	ENSG00000126550.8	+	protein_coding	KNOWN	HTN1	5	6	-0.412683
chr4	70067386	70085290	70076338	ENSG00000234124.6	+	unitary_pseudogene	KNOWN	CSN1S2AP	4	13	-0.598688
chr4	70133616	70176799	70155207	ENSG00000187533.13	+	protein_coding	KNOWN	PRR27	5	11	-0.675060
chr4	70196496	70204576	70200536	ENSG00000109205.16	+	protein_coding	KNOWN	ODAM	5	11	-0.773359
chr4	70226071	70235252	70230661	ENSG00000181617.5	+	protein_coding	KNOWN	FDCSP	1	5	-0.836143
chr4	70242588	70251428	70247008	ENSG00000171209.3	+	protein_coding	KNOWN	CSN3	1	5	-0.825992
chr4	70334966	70337116	70336041	ENSG00000145309.5	+	protein_coding	KNOWN	CABS1	1	2	-0.335119
chr4	70360761	70367158	70363959	ENSG00000109208.4	+	protein_coding	KNOWN	SMR3A	1	3	-0.232630
chr4	70370093	70390244	70380168	ENSG00000171201.10	+	protein_coding	KNOWN	SMR3B	4	4	-0.445994
chr4	70397882	70410194	70404038	ENSG00000171199.9	+	protein_coding	KNOWN	PROL1	4	4	-0.683456
chr4	70430492	70482997	70456744	ENSG00000171195.10	+	protein_coding	KNOWN	MUC7	7	4	-0.466690
chr4	70518540	70532742	70525641	ENSG00000187689.9	+	protein_coding	KNOWN	AMTN	2	9	-0.402372
chr4	70592256	70607288	70599772	ENSG00000178522.14	+	protein_coding	KNOWN	AMBN	3	14	-0.139334
chr4	70628744	70686816	70657780	ENSG00000132464.11	+	protein_coding	KNOWN	ENAM	4	9	-0.246267
chr4	70655541	70681817	70668679	ENSG00000132465.10	-	protein_coding	KNOWN	JCHAIN	6	6	-0.183561
chr4	70688479	70690551	70689515	ENSG00000132467.3	+	protein_coding	KNOWN	UTP3	1	1	-0.058697
chr4	70701755	70701858	70701806	ENSG00000207448.1	+	snRNA	KNOWN	RNU6-520P	1	1	-0.149669
chr4	70703018	70703123	70703070	ENSG00000207058.1	-	snRNA	KNOWN	RNU6-784P	1	1	-0.149669
chr4	70703747	70704491	70704119	ENSG00000272986.1	-	antisense	KNOWN	RP11-46J23.1	1	1	-0.149669
chr4	70704204	70807315	70755759	ENSG00000018189.12	+	protein_coding	KNOWN	RUFY3	15	19	0.009433
chr4	70815782	70839945	70827863	ENSG00000132463.13	-	protein_coding	KNOWN	GRSF1	8	11	0.095789
chr4	70852130	70852240	70852185	ENSG00000207007.1	+	snRNA	KNOWN	RNU6-891P	1	1	0.302352
chr4	70902326	71022449	70962387	ENSG00000173542.8	+	protein_coding	KNOWN	MOB1B	5	7	0.113825
chr4	70992538	71030914	71011726	ENSG00000156136.9	+	protein_coding	KNOWN	DCK	6	8	-0.139964
chr4	71187286	71572087	71379686	ENSG00000080493.13	+	protein_coding	KNOWN	SLC4A4	6	26	-0.083213
chr4	71300258	71301235	71300746	ENSG00000249170.1	-	processed_pseudogene	KNOWN	RP11-1J11.1	1	1	-0.148323
chr4	71434405	71437924	71436164	ENSG00000270098.1	-	processed_pseudogene	KNOWN	LDHAL6EP	1	2	-0.152161
chr4	71741693	71804041	71772867	ENSG00000145321.12	-	protein_coding	KNOWN	GC	8	14	-0.391815
chr4	71759518	71759616	71759567	ENSG00000222236.1	-	rRNA	KNOWN	RNA5SP163	1	1	-0.341905
chr4	71821305	71823980	71822642	ENSG00000248567.1	-	lincRNA	KNOWN	RP11-545L5.1	1	4	-0.348050
chr4	72031804	72148067	72089935	ENSG00000056291.17	+	protein_coding	KNOWN	NPFFR2	5	5	-0.510472
chr4	72280969	72568799	72424884	ENSG00000156140.8	-	protein_coding	KNOWN	ADAMTS3	4	23	-0.470477
chr4	72323028	72330751	72326889	ENSG00000250877.1	+	antisense	KNOWN	RP11-373J21.1	1	2	-0.453668
chr4	72324535	72324602	72324568	ENSG00000278609.1	-	miRNA	NOVEL	AC095056.1	1	1	-0.444061
chr4	72807267	72808192	72807729	ENSG00000270665.1	+	processed_pseudogene	KNOWN	HNRNPA1P67	1	1	-0.361374
chr4	72965178	72965303	72965240	ENSG00000252955.1	+	snRNA	KNOWN	RNU4ATAC9P	1	1	-0.104405
chr4	73026748	73026873	73026810	ENSG00000210839.1	+	snRNA	KNOWN	RNU6ATAC5P	1	1	-0.376913
chr4	73052362	73069755	73061058	ENSG00000163626.16	-	protein_coding	KNOWN	COX18	5	6	-0.250695
chr4	73073376	73258798	73166087	ENSG00000132466.17	-	protein_coding	KNOWN	ANKRD17	10	34	-0.074360
chr4	73098822	73099145	73098983	ENSG00000248641.1	+	processed_pseudogene	KNOWN	HMGA1P2	1	1	0.066457
chr4	73259209	73317953	73288581	ENSG00000250220.1	+	antisense	KNOWN	RP11-692D12.1	1	5	-0.174879
chr4	73263960	73264084	73264022	ENSG00000221639.1	+	snoRNA	NOVEL	SNORA3	1	1	0.164400
chr4	73337233	73337771	73337502	ENSG00000249976.2	-	processed_pseudogene	KNOWN	RP11-580P21.1	1	1	-0.111292
chr4	73397114	73421412	73409263	ENSG00000163631.16	+	protein_coding	KNOWN	ALB	20	15	-0.735520
chr4	73431138	73456174	73443656	ENSG00000081051.7	+	protein_coding	KNOWN	AFP	7	15	-0.482838
chr4	73481683	73504001	73492842	ENSG00000079557.4	+	protein_coding	KNOWN	AFM	2	15	-0.349539
chr4	73508803	73534128	73521465	ENSG00000250436.1	+	lincRNA	KNOWN	RP11-622A1.2	3	4	-0.530429
chr4	73543822	73544013	73543917	ENSG00000249970.1	+	processed_pseudogene	KNOWN	RP11-622A1.1	1	1	-0.472961
chr4	73571550	73620631	73596090	ENSG00000169435.13	-	protein_coding	KNOWN	RASSF6	5	11	-0.396819
chr4	73710302	73714527	73712414	ENSG00000228277.1	+	lincRNA	KNOWN	AC112518.3	1	3	-0.176114
chr4	73740506	73743716	73742111	ENSG00000169429.10	+	protein_coding	KNOWN	CXCL8	3	4	-0.060011
chr4	73777636	73778060	73777848	ENSG00000249051.2	-	processed_pseudogene	KNOWN	RP11-447E20.1	1	1	0.040153
chr4	73836497	73849064	73842780	ENSG00000124875.9	+	protein_coding	KNOWN	CXCL6	3	4	0.070459
chr4	73847866	73848829	73848347	ENSG00000250550.3	+	transcribed_unprocessed_pseudogene	KNOWN	PPBPP1	1	4	0.070459
chr4	73853189	73854155	73853672	ENSG00000109272.3	+	protein_coding	KNOWN	PF4V1	1	3	-0.255932
chr4	73869393	73871242	73870317	ENSG00000163739.4	+	protein_coding	KNOWN	CXCL1	2	4	-0.034086
chr4	73938604	73939558	73939081	ENSG00000249920.2	-	processed_pseudogene	KNOWN	HNRNPA1P55	1	1	-0.596547
chr4	73944011	73944324	73944167	ENSG00000250339.2	-	processed_pseudogene	KNOWN	CXCL1P	1	2	-0.596547
chr4	73981077	73982124	73981600	ENSG00000163737.3	-	protein_coding	KNOWN	PF4	1	3	0.091992
chr4	73987038	73988197	73987617	ENSG00000163736.3	-	protein_coding	KNOWN	PPBP	1	3	0.091992
chr4	73995642	73998779	73997210	ENSG00000163735.6	-	protein_coding	KNOWN	CXCL5	1	4	-0.447883
chr4	74011578	74011876	74011727	ENSG00000244194.3	+	misc_RNA	KNOWN	RN7SL218P	1	1	-0.554776
chr4	74036589	74038807	74037698	ENSG00000163734.4	-	protein_coding	KNOWN	CXCL3	4	4	-0.109642
chr4	74054038	74055399	74054718	ENSG00000248848.1	-	transcribed_unprocessed_pseudogene	KNOWN	PPBPP2	2	3	-0.125813
chr4	74085995	74086672	74086333	ENSG00000251017.1	-	processed_pseudogene	KNOWN	RP11-629B11.4	1	1	-0.288432
chr4	74097035	74099293	74098164	ENSG00000081041.8	-	protein_coding	KNOWN	CXCL2	3	4	-0.151122
chr4	74114174	74303099	74208636	ENSG00000163738.18	+	protein_coding	KNOWN	MTHFD2L	15	10	-0.336816
chr4	74156511	74158373	74157442	ENSG00000269559.2	-	antisense	KNOWN	RP11-629B11.5	1	1	-0.579954
chr4	74308473	74315307	74311890	ENSG00000182585.9	+	protein_coding	KNOWN	EPGN	9	6	-0.215910
chr4	74326886	74326963	74326924	ENSG00000265720.1	+	miRNA	NOVEL	AC097470.1	1	1	-0.179605
chr4	74365143	74388751	74376947	ENSG00000124882.3	+	protein_coding	KNOWN	EREG	3	5	-0.383084
chr4	74418917	74440457	74429687	ENSG00000250532.1	-	antisense	KNOWN	RP11-727M10.1	1	2	-0.093498
chr4	74445134	74455009	74450071	ENSG00000109321.10	+	protein_coding	KNOWN	AREG	3	6	-0.167318
chr4	74552584	74589481	74571032	ENSG00000249942.1	-	antisense	KNOWN	AC142293.3	1	6	-0.465098
chr4	74744759	74794686	74769722	ENSG00000174808.11	-	protein_coding	KNOWN	BTC	2	6	-0.535412
chr4	74917822	74918138	74917980	ENSG00000250356.1	+	processed_pseudogene	KNOWN	HSPE1P23	1	2	-0.020218
chr4	74933095	75050115	74991605	ENSG00000169116.11	+	protein_coding	KNOWN	PARM1	2	4	-0.402396
chr4	74955974	74970362	74963168	ENSG00000249717.1	-	antisense	KNOWN	RP11-44F21.3	2	4	-0.287636
chr4	74993877	75034824	75014350	ENSG00000248165.1	-	antisense	KNOWN	RP11-44F21.2	1	4	-0.420407
chr4	75081702	75084717	75083209	ENSG00000260265.1	-	lincRNA	KNOWN	RP11-44F21.5	4	2	-0.334541
chr4	75101477	75101943	75101710	ENSG00000250315.2	+	transcribed_processed_pseudogene	KNOWN	RP11-44F21.4	2	1	-0.389877
chr4	75194867	75195079	75194973	ENSG00000250560.2	+	processed_pseudogene	KNOWN	RP11-598G2.1	1	1	-0.386662
chr4	75269068	75361182	75315125	ENSG00000251185.1	-	lincRNA	KNOWN	RP11-542G1.1	1	2	-0.393059
chr4	75341279	75359024	75350151	ENSG00000251454.1	-	lincRNA	KNOWN	RP11-542G1.2	1	4	-0.485085
chr4	75354076	75362566	75358321	ENSG00000251383.1	+	lincRNA	KNOWN	RP11-542G1.3	1	4	-0.604616
chr4	75361207	75434449	75397828	ENSG00000248646.1	-	lincRNA	KNOWN	RP11-567N4.2	1	2	-0.245603
chr4	75401195	75423023	75412109	ENSG00000250735.5	+	lincRNA	KNOWN	RP11-567N4.3	2	4	-0.211005
chr4	75479037	75514764	75496900	ENSG00000163743.13	-	protein_coding	KNOWN	RCHY1	13	9	-0.201326
chr4	75513946	75550473	75532209	ENSG00000174796.12	+	protein_coding	KNOWN	THAP6	13	6	-0.009210
chr4	75556048	75565885	75560966	ENSG00000174792.10	+	protein_coding	KNOWN	C4orf26	5	4	0.369773
chr4	75578005	75630716	75604360	ENSG00000138769.10	-	protein_coding	KNOWN	CDKL2	4	14	-0.120243
chr4	75642782	75724525	75683653	ENSG00000138757.14	-	protein_coding	KNOWN	G3BP2	19	12	0.121351
chr4	75662120	75662213	75662166	ENSG00000201644.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.213421
chr4	75724593	75814286	75769439	ENSG00000138768.14	+	protein_coding	KNOWN	USO1	4	26	0.125814
chr4	75829454	75829589	75829521	ENSG00000222644.1	-	snRNA	KNOWN	RNU2-16P	1	1	0.101152
chr4	75830751	75832705	75831728	ENSG00000229717.2	+	antisense	KNOWN	RP11-556N4.1	1	1	0.133571
chr4	75859864	75902571	75881217	ENSG00000156194.17	-	protein_coding	KNOWN	PPEF2	7	18	0.251489
chr4	75913657	75941051	75927354	ENSG00000138744.14	-	protein_coding	KNOWN	NAAA	9	11	0.071660
chr4	75940950	75990962	75965956	ENSG00000198301.11	-	protein_coding	KNOWN	SDAD1	10	22	0.057798
chr4	75949920	75957413	75953666	ENSG00000279909.1	+	protein_coding	KNOWN	AC110615.1	1	3	0.123797
chr4	75980790	76005942	75993366	ENSG00000245928.2	+	antisense	KNOWN	RP11-630D6.5	1	3	-0.023878
chr4	75991788	75992048	75991918	ENSG00000280671.1	+	protein_coding	KNOWN	AC112719.2	1	2	-0.024105
chr4	76001275	76007488	76004381	ENSG00000138755.5	-	protein_coding	KNOWN	CXCL9	1	4	-0.024105
chr4	76011184	76112802	76061993	ENSG00000156219.16	+	protein_coding	KNOWN	ART3	15	12	-0.206903
chr4	76021117	76023497	76022307	ENSG00000169245.5	-	protein_coding	KNOWN	CXCL10	1	4	-0.259720
chr4	76033682	76041415	76037548	ENSG00000169248.12	-	protein_coding	KNOWN	CXCL11	2	5	-0.265560
chr4	76036750	76037064	76036907	ENSG00000225846.4	-	processed_pseudogene	KNOWN	RP11-630D6.1	1	1	-0.265560
chr4	76095408	76095508	76095458	ENSG00000265931.1	+	miRNA	NOVEL	AC112719.1	1	1	-0.104866
chr4	76114659	76148515	76131587	ENSG00000138750.14	-	protein_coding	KNOWN	NUP54	18	12	-0.241766
chr4	76158737	76213893	76186315	ENSG00000138760.8	-	protein_coding	KNOWN	SCARB2	5	12	-0.101807
chr4	76214040	76283780	76248910	ENSG00000189157.13	+	protein_coding	KNOWN	FAM47E	9	8	-0.003018
chr4	76251721	76311129	76281425	ENSG00000272414.5	+	protein_coding	KNOWN	FAM47E-STBD1	4	7	-0.190638
chr4	76306026	76311599	76308812	ENSG00000118804.8	+	protein_coding	KNOWN	STBD1	1	2	-0.192705
chr4	76312997	76421868	76367432	ENSG00000163749.17	-	protein_coding	KNOWN	CCDC158	5	24	-0.253405
chr4	76344550	76345590	76345070	ENSG00000249858.2	+	processed_pseudogene	KNOWN	SNX5P1	1	1	-0.466218
chr4	76356610	76356715	76356662	ENSG00000212368.1	-	snRNA	KNOWN	RNU6-1000P	1	1	-0.372971
chr4	76401251	76401569	76401410	ENSG00000240426.1	+	processed_pseudogene	KNOWN	RP11-356M17.1	1	1	-0.156507
chr4	76402076	76402146	76402111	ENSG00000199857.1	+	snoRNA	NOVEL	SNORD50	1	1	-0.156507
chr4	76435100	76783253	76609176	ENSG00000138771.14	+	protein_coding	KNOWN	SHROOM3	10	11	0.099982
chr4	76493247	76493386	76493316	ENSG00000221118.1	-	miRNA	NOVEL	AC112249.1	1	1	-0.224616
chr4	76509284	76509719	76509501	ENSG00000249278.1	-	processed_pseudogene	KNOWN	RP11-688H10.1	1	1	-0.224616
chr4	76532222	76532327	76532274	ENSG00000207307.1	-	snRNA	KNOWN	RNU6-145P	1	1	-0.093564
chr4	76573568	76573632	76573600	ENSG00000263445.1	+	miRNA	KNOWN	MIR4450	1	1	-0.094160
chr4	76575541	76575650	76575595	ENSG00000275761.1	+	miRNA	NOVEL	AC112249.2	1	1	-0.094160
chr4	76637623	76644368	76640995	ENSG00000231335.1	+	sense_intronic	KNOWN	AC107072.2	1	4	0.166760
chr4	76756960	76758474	76757717	ENSG00000233860.1	-	antisense	KNOWN	RP11-359D14.2	1	2	0.196834
chr4	76758554	76801964	76780259	ENSG00000224218.1	-	antisense	KNOWN	RP11-359D14.3	1	2	0.227196
chr4	76853964	76854060	76854012	ENSG00000264124.1	+	miRNA	NOVEL	AC104687.1	1	1	0.018825
chr4	76886029	76886370	76886199	ENSG00000270244.1	-	processed_pseudogene	KNOWN	RP11-123J14.4	1	1	0.026029
chr4	76891034	76891445	76891239	ENSG00000242727.2	+	processed_pseudogene	KNOWN	RP11-123J14.1	1	1	0.083954
chr4	76894928	76898147	76896537	ENSG00000186212.3	-	protein_coding	KNOWN	SOWAHB	1	1	0.083954
chr4	76949703	77040384	76995043	ENSG00000138758.11	+	protein_coding	KNOWN	SEPT11	16	12	0.066880
chr4	76958860	76959169	76959014	ENSG00000234036.4	-	processed_pseudogene	KNOWN	TXNP6	1	1	0.212286
chr4	77047158	77076005	77061581	ENSG00000118816.9	-	protein_coding	KNOWN	CCNI	9	7	0.166259
chr4	77082403	77083126	77082764	ENSG00000214062.5	-	processed_pseudogene	KNOWN	RPL7P17	1	1	0.100503
chr4	77112495	77113458	77112976	ENSG00000271676.1	-	processed_pseudogene	KNOWN	RP11-1E1.2	1	1	-0.156445
chr4	77150328	77150437	77150382	ENSG00000201641.1	-	snRNA	KNOWN	RNU6-1187P	1	1	-0.012345
chr4	77157151	77433388	77295269	ENSG00000138764.13	+	protein_coding	KNOWN	CCNG2	8	12	-0.135387
chr4	77216416	77216878	77216647	ENSG00000270669.1	-	processed_pseudogene	KNOWN	CTB-179I1.3	1	1	0.060283
chr4	77311397	77312111	77311754	ENSG00000250006.2	-	processed_pseudogene	KNOWN	CTB-179I1.1	1	1	-0.087558
chr4	77350370	77351235	77350802	ENSG00000248831.2	-	processed_pseudogene	KNOWN	CTB-179I1.2	1	1	-0.325566
chr4	77394491	77494286	77444388	ENSG00000249036.1	-	lincRNA	KNOWN	RP11-625I7.1	1	3	-0.220819
chr4	77511753	77611834	77561793	ENSG00000156234.7	+	protein_coding	KNOWN	CXCL13	2	5	-0.192753
chr4	77702746	77702803	77702774	ENSG00000221711.1	-	snoRNA	NOVEL	SNORD75	1	1	-0.336851
chr4	77713387	77819615	77766501	ENSG00000138767.12	-	protein_coding	KNOWN	CNOT6L	8	12	-0.351544
chr4	77862520	77952790	77907655	ENSG00000169288.17	+	protein_coding	KNOWN	MRPL1	6	9	-0.159287
chr4	77864508	77864804	77864656	ENSG00000250214.1	-	processed_pseudogene	KNOWN	RP13-488H8.1	1	1	-0.363891
chr4	77958000	77958780	77958390	ENSG00000248926.1	-	processed_pseudogene	KNOWN	RP11-777B9.1	1	1	-0.403536
chr4	77963940	77964511	77964225	ENSG00000248956.1	+	processed_pseudogene	KNOWN	HMGB1P44	1	1	-0.403536
chr4	77965300	77965410	77965355	ENSG00000278187.1	+	miRNA	NOVEL	AC114801.1	1	1	-0.403536
chr4	77987860	77988813	77988336	ENSG00000248640.1	-	processed_pseudogene	KNOWN	HNRNPA1P56	1	1	-0.435746
chr4	78003143	78003439	78003291	ENSG00000248128.1	+	processed_pseudogene	KNOWN	RP11-777B9.4	1	1	-0.217693
chr4	78008512	78008688	78008600	ENSG00000249072.1	-	processed_pseudogene	KNOWN	RP11-777B9.5	1	1	-0.217693
chr4	78057570	78544269	78300919	ENSG00000138759.17	+	protein_coding	KNOWN	FRAS1	8	74	-0.126227
chr4	78180866	78182046	78181456	ENSG00000249565.2	-	processed_pseudogene	KNOWN	SERBP1P5	1	1	-0.082613
chr4	78188336	78188423	78188379	ENSG00000221183.1	+	miRNA	NOVEL	AC093897.1	1	1	-0.082613
chr4	78379197	78379514	78379355	ENSG00000248117.1	+	processed_pseudogene	KNOWN	MINOS1P4	1	1	0.002010
chr4	78551519	78610451	78580985	ENSG00000138772.12	+	protein_coding	KNOWN	ANXA3	10	14	-0.045252
chr4	78632273	78632385	78632329	ENSG00000200998.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.519945
chr4	78645903	78682699	78664301	ENSG00000251442.5	+	lincRNA	KNOWN	LINC01094	6	5	0.221199
chr4	78648954	78649242	78649098	ENSG00000251019.1	-	processed_pseudogene	KNOWN	HIGD1AP13	1	1	0.519945
chr4	78768499	78768750	78768624	ENSG00000239793.1	+	processed_pseudogene	KNOWN	RP11-109G23.1	1	1	-0.251661
chr4	78773654	78775973	78774813	ENSG00000260278.1	-	antisense	KNOWN	RP11-109G23.3	1	1	-0.174523
chr4	78776342	78916372	78846357	ENSG00000138756.17	+	protein_coding	KNOWN	BMP2K	8	17	-0.265986
chr4	78820752	78820821	78820786	ENSG00000266270.1	+	miRNA	KNOWN	MIR5096	1	1	-0.054229
chr4	78887127	78939438	78913282	ENSG00000163291.14	-	protein_coding	KNOWN	PAQR3	12	13	-0.486670
chr4	78898855	78899154	78899004	ENSG00000242175.3	+	misc_RNA	KNOWN	RN7SL127P	1	1	-0.711469
chr4	78971748	79308798	79140273	ENSG00000249307.5	+	antisense	KNOWN	LINC01088	11	6	-0.627879
chr4	79225694	79326050	79275872	ENSG00000156269.4	-	protein_coding	KNOWN	NAA11	3	3	-0.572678
chr4	79406352	79408293	79407322	ENSG00000196475.5	-	protein_coding	KNOWN	GK2	1	1	-0.670211
chr4	79492416	79576460	79534438	ENSG00000250334.5	+	lincRNA	KNOWN	LINC00989	2	4	-0.548184
chr4	79587302	79588130	79587716	ENSG00000249646.2	-	transcribed_unprocessed_pseudogene	KNOWN	OR7E94P	2	1	-0.700413
chr4	79596542	79597173	79596857	ENSG00000251399.1	+	lincRNA	KNOWN	RP11-234K19.1	1	2	-0.320391
chr4	79663761	79696837	79680299	ENSG00000248408.1	+	lincRNA	KNOWN	RP11-452C8.1	1	4	-0.450392
chr4	79827471	79877770	79852620	ENSG00000251321.1	+	lincRNA	KNOWN	PCAT4	2	3	-0.743477
chr4	79843102	79843228	79843165	ENSG00000212620.1	+	snoRNA	NOVEL	SNORA75	1	1	-0.772781
chr4	79901149	80125454	80013301	ENSG00000163297.16	-	protein_coding	KNOWN	ANTXR2	9	18	-0.254223
chr4	80079532	80081122	80080327	ENSG00000236530.2	+	processed_pseudogene	KNOWN	AC097711.1	1	1	-0.162054
chr4	80161129	80162011	80161570	ENSG00000244002.1	+	processed_pseudogene	KNOWN	RPSAP39	1	1	0.091992
chr4	80183280	80190169	80186724	ENSG00000248719.1	-	antisense	KNOWN	RP11-377G16.2	1	2	-0.267712
chr4	80183879	80204329	80194104	ENSG00000152784.15	+	protein_coding	KNOWN	PRDM8	10	10	0.247550
chr4	80266599	80336680	80301639	ENSG00000138675.16	+	protein_coding	KNOWN	FGF5	5	5	-0.035544
chr4	80335720	80963756	80649738	ENSG00000197826.11	+	protein_coding	KNOWN	C4orf22	9	7	-0.399521
chr4	80386178	80388716	80387447	ENSG00000232327.4	-	processed_pseudogene	KNOWN	RP11-395C17.1	1	1	-0.251310
chr4	81030965	81057531	81044248	ENSG00000152785.6	+	protein_coding	KNOWN	BMP3	1	3	-0.303524
chr4	81087370	81215117	81151243	ENSG00000138669.9	-	protein_coding	KNOWN	PRKG2	7	19	-0.501514
chr4	81164940	81193395	81179167	ENSG00000251059.5	+	antisense	KNOWN	RP11-100N20.1	2	5	-0.502069
chr4	81334303	81334418	81334360	ENSG00000207065.1	+	snRNA	KNOWN	RNU5A-2P	1	1	-0.505249
chr4	81426393	82044244	81735318	ENSG00000138670.16	-	protein_coding	KNOWN	RASGEF1B	9	14	-0.315069
chr4	81602797	82044244	81823520	ENSG00000251331.6	-	lincRNA	KNOWN	RP11-689K5.3	4	6	-0.334318
chr4	81733385	81734207	81733796	ENSG00000248282.1	-	processed_pseudogene	KNOWN	RP11-112L18.1	1	1	-0.682241
chr4	81919995	81920387	81920191	ENSG00000248448.2	-	processed_pseudogene	KNOWN	COX5BP1	1	1	-0.472272
chr4	81928313	81928439	81928376	ENSG00000252762.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.472272
chr4	82010665	82013095	82011880	ENSG00000248543.2	-	processed_pseudogene	KNOWN	NPM1P41	1	3	-0.272772
chr4	82128535	82129656	82129095	ENSG00000250826.2	+	processed_pseudogene	KNOWN	HNRNPA3P13	1	1	-0.577860
chr4	82174547	82174653	82174600	ENSG00000202485.1	+	snRNA	KNOWN	RNU6-499P	1	1	-0.370351
chr4	82275071	82276600	82275835	ENSG00000234568.3	+	processed_pseudogene	KNOWN	BIN2P1	1	1	-0.360914
chr4	82344876	82345540	82345208	ENSG00000273156.1	-	lincRNA	KNOWN	RP11-127B20.2	1	1	-0.118226
chr4	82352498	82374503	82363500	ENSG00000138668.18	-	protein_coding	KNOWN	HNRNPD	12	9	-0.200404
chr4	82374301	82384027	82379164	ENSG00000272677.1	+	antisense	KNOWN	RP11-127B20.3	2	2	-0.085651
chr4	82401578	82402456	82402017	ENSG00000250325.1	-	processed_pseudogene	KNOWN	IGBP1P4	1	1	0.250140
chr4	82402638	82402706	82402672	ENSG00000202440.1	-	snoRNA	NOVEL	SNORD42	1	1	0.250140
chr4	82422564	82430408	82426486	ENSG00000152795.17	-	protein_coding	KNOWN	HNRNPDL	10	10	-0.171777
chr4	82430562	82461091	82445826	ENSG00000145293.14	+	protein_coding	KNOWN	ENOPH1	5	8	0.104380
chr4	82483170	82562357	82522763	ENSG00000249242.7	-	protein_coding	KNOWN	TMEM150C	4	8	-0.037548
chr4	82490823	82491635	82491229	ENSG00000214988.4	-	processed_pseudogene	KNOWN	RPL7AP26	1	1	-0.282404
chr4	82494786	82496278	82495532	ENSG00000227304.3	-	transcribed_processed_pseudogene	KNOWN	RP11-791G16.2	2	1	-0.282404
chr4	82571137	82571814	82571475	ENSG00000249960.2	+	processed_pseudogene	KNOWN	RP11-791G16.5	1	2	-0.104232
chr4	82580117	82581384	82580750	ENSG00000248113.2	-	processed_pseudogene	KNOWN	RP11-791G16.4	1	1	-0.104232
chr4	82613113	82621437	82617275	ENSG00000231782.6	-	lincRNA	KNOWN	LINC00575	2	4	-0.041532
chr4	82629539	82798857	82714198	ENSG00000145284.11	-	protein_coding	KNOWN	SCD5	2	5	0.065758
chr4	82691737	82692468	82692102	ENSG00000270480.1	+	processed_pseudogene	KNOWN	RP11-57B24.1	1	1	0.262876
chr4	82753337	82753430	82753383	ENSG00000207746.1	-	miRNA	KNOWN	MIR575	1	1	0.175320
chr4	82775461	82776101	82775781	ENSG00000270842.1	+	processed_pseudogene	KNOWN	RP11-57B24.2	1	2	-0.001621
chr4	82818661	82901166	82859913	ENSG00000138674.16	-	protein_coding	KNOWN	SEC31A	41	29	0.090256
chr4	82893009	82900960	82896984	ENSG00000251022.6	-	antisense	KNOWN	THAP9-AS1	12	5	0.050172
chr4	82900684	82919969	82910326	ENSG00000168152.12	+	protein_coding	KNOWN	THAP9	6	6	0.020655
chr4	82909973	83012926	82961449	ENSG00000189308.10	-	protein_coding	KNOWN	LIN54	10	13	0.097645
chr4	82944738	82944845	82944791	ENSG00000199530.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.182371
chr4	83003412	83003517	83003464	ENSG00000251874.1	+	snRNA	KNOWN	RNU6-615P	1	1	0.385723
chr4	83034447	83075818	83055132	ENSG00000138663.8	+	protein_coding	KNOWN	COPS4	11	11	0.020812
chr4	83090048	83137075	83113561	ENSG00000145287.10	-	protein_coding	KNOWN	PLAC8	6	8	0.192776
chr4	83233512	83247213	83240362	ENSG00000250057.1	-	lincRNA	KNOWN	RP11-576N17.5	1	3	0.063563
chr4	83237303	83237444	83237373	ENSG00000250677.1	+	processed_pseudogene	KNOWN	RP11-576N17.2	1	1	0.063563
chr4	83247179	83248206	83247692	ENSG00000248401.2	+	processed_pseudogene	KNOWN	RP11-576N17.3	1	1	0.063563
chr4	83261536	83284914	83273225	ENSG00000173085.13	-	protein_coding	KNOWN	COQ2	5	7	0.352217
chr4	83292461	83335153	83313807	ENSG00000173083.14	-	protein_coding	KNOWN	HPSE	7	13	0.116295
chr4	83369416	83369523	83369469	ENSG00000274154.1	-	processed_pseudogene	KNOWN	RP11-576N17.6	1	1	0.032796
chr4	83377363	83378076	83377719	ENSG00000251647.2	-	processed_pseudogene	KNOWN	RP11-576N17.4	1	2	0.182190
chr4	83407343	83455856	83431599	ENSG00000163312.10	-	protein_coding	KNOWN	HELQ	6	18	-0.241176
chr4	83455932	83469735	83462833	ENSG00000163319.10	+	protein_coding	KNOWN	MRPS18C	9	6	-0.292438
chr4	83459517	83523348	83491432	ENSG00000163322.13	-	protein_coding	KNOWN	FAM175A	9	9	-0.087366
chr4	83477524	83478424	83477974	ENSG00000213608.5	+	processed_pseudogene	KNOWN	SLC25A14P1	1	1	-0.342809
chr4	83502699	83503034	83502866	ENSG00000239525.1	+	processed_pseudogene	KNOWN	RPL30P5	1	1	0.145431
chr4	83535914	83605875	83570894	ENSG00000138678.10	+	protein_coding	KNOWN	GPAT3	8	13	-0.080596
chr4	83636196	83636290	83636243	ENSG00000201633.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.130881
chr4	83668510	83731755	83700132	ENSG00000249171.1	-	lincRNA	KNOWN	RP11-767N15.1	1	4	-0.562305
chr4	83748198	83748329	83748263	ENSG00000281366.1	-	miRNA	NOVEL	AC021192.1	1	1	-0.428162
chr4	83796436	84293412	84044924	ENSG00000250546.5	-	processed_transcript	KNOWN	RP11-8L2.1	3	8	-0.525949
chr4	84233657	84233763	84233710	ENSG00000200108.1	+	snRNA	KNOWN	RNU6-774P	1	1	-0.552780
chr4	84244003	84245488	84244745	ENSG00000214980.4	+	processed_pseudogene	KNOWN	RP11-274J2.1	1	1	-0.552780
chr4	84371393	84380189	84375791	ENSG00000248749.1	-	lincRNA	KNOWN	RP11-42A4.1	1	3	-0.396755
chr4	84491987	84498450	84495218	ENSG00000163623.9	-	protein_coding	KNOWN	NKX6-1	2	3	0.073495
chr4	84544304	84544519	84544411	ENSG00000258013.2	-	processed_pseudogene	KNOWN	RPL3P13	1	1	-0.632374
chr4	84582979	84651338	84617158	ENSG00000163624.5	+	protein_coding	KNOWN	CDS1	2	13	-0.415954
chr4	84669610	84966391	84818000	ENSG00000163625.15	-	protein_coding	KNOWN	WDFY3	12	68	-0.195883
chr4	84687725	84688000	84687862	ENSG00000239466.3	-	misc_RNA	KNOWN	RN7SL552P	1	1	-0.167875
chr4	84803258	84810391	84806824	ENSG00000251260.1	+	antisense	KNOWN	WDFY3-AS1	1	2	-0.189668
chr4	84886386	84886486	84886436	ENSG00000252062.1	-	snRNA	KNOWN	RNU6-469P	1	1	-0.246331
chr4	84965682	85011277	84988479	ENSG00000180769.8	+	processed_transcript	KNOWN	WDFY3-AS2	3	6	-0.284462
chr4	85100496	85100823	85100659	ENSG00000201901.1	+	misc_RNA	KNOWN	RN7SKP48	1	1	-0.687882
chr4	85246157	85246912	85246534	ENSG00000248725.3	+	processed_pseudogene	KNOWN	RP11-218C23.1	1	1	-0.531445
chr4	85475114	86002670	85738892	ENSG00000138639.17	+	protein_coding	KNOWN	ARHGAP24	12	10	-0.329757
chr4	85722443	85722550	85722496	ENSG00000266421.2	+	miRNA	NOVEL	AC097108.1	1	1	-0.642114
chr4	85910478	85910543	85910510	ENSG00000265774.1	-	miRNA	NOVEL	AC098870.1	1	1	-0.500833
chr4	86000327	86000766	86000546	ENSG00000273389.1	-	antisense	KNOWN	RP13-514E23.2	1	1	-0.320062
chr4	86012296	86013874	86013085	ENSG00000261496.1	-	sense_overlapping	KNOWN	RP13-514E23.1	1	1	-0.231846
chr4	86015123	86594131	86304627	ENSG00000109339.18	-	protein_coding	KNOWN	MAPK10	35	14	-0.349309
chr4	86117912	86219926	86168919	ENSG00000250062.5	+	antisense	KNOWN	RP11-778J15.1	2	4	-0.500461
chr4	86336318	86336614	86336466	ENSG00000252757.1	-	misc_RNA	KNOWN	RN7SKP96	1	1	-0.246810
chr4	86542482	86542552	86542517	ENSG00000266515.1	-	miRNA	KNOWN	MIR4452	1	1	-0.190210
chr4	86594315	86815171	86704743	ENSG00000163629.12	+	protein_coding	KNOWN	PTPN13	9	48	-0.148121
chr4	86823468	86849263	86836365	ENSG00000145283.7	-	protein_coding	KNOWN	SLC10A6	2	6	0.062601
chr4	86870191	86871404	86870797	ENSG00000243312.3	+	processed_pseudogene	KNOWN	RP11-397E7.1	1	2	-0.156921
chr4	86876205	86936202	86906203	ENSG00000163633.10	-	protein_coding	KNOWN	C4orf36	12	7	0.119364
chr4	86876338	86876652	86876495	ENSG00000250202.2	+	processed_pseudogene	KNOWN	RP11-397E7.2	1	1	-0.156921
chr4	86913266	86914817	86914041	ENSG00000251411.1	-	processed_pseudogene	KNOWN	RP11-397E7.4	1	3	0.281334
chr4	86935002	87141054	87038028	ENSG00000172493.20	+	protein_coding	KNOWN	AFF1	11	23	0.139579
chr4	86949669	86950113	86949891	ENSG00000235043.3	-	processed_pseudogene	KNOWN	TECRP1	1	1	0.314509
chr4	87160103	87240314	87200208	ENSG00000145332.13	-	protein_coding	KNOWN	KLHL8	8	10	-0.116764
chr4	87166844	87167734	87167289	ENSG00000248196.1	+	processed_pseudogene	KNOWN	RP11-476C8.2	1	1	-0.013618
chr4	87207092	87208086	87207589	ENSG00000248180.1	+	processed_pseudogene	KNOWN	GAPDHP60	1	1	-0.542923
chr4	87261931	87266822	87264376	ENSG00000250572.1	-	lincRNA	KNOWN	RP11-529H2.1	1	2	-0.364386
chr4	87300495	87300583	87300539	ENSG00000263981.1	-	miRNA	KNOWN	MIR5705	1	1	-0.466376
chr4	87303789	87322906	87313347	ENSG00000170509.11	-	protein_coding	KNOWN	HSD17B13	2	7	-0.089389
chr4	87317170	87345210	87331190	ENSG00000255723.1	-	processed_transcript	KNOWN	RP11-529H2.2	1	4	-0.019278
chr4	87336610	87391386	87363998	ENSG00000198189.10	-	protein_coding	KNOWN	HSD17B11	7	7	-0.109541
chr4	87386883	87387174	87387028	ENSG00000240966.3	-	misc_RNA	KNOWN	RN7SL681P	1	1	-0.022720
chr4	87410644	87411388	87411016	ENSG00000249262.2	+	processed_pseudogene	KNOWN	RP11-710E1.1	1	1	0.000844
chr4	87412228	87412346	87412287	ENSG00000280481.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.000844
chr4	87422582	87459454	87441018	ENSG00000170502.12	+	protein_coding	KNOWN	NUDT9	8	8	-0.211072
chr4	87460807	87462280	87461543	ENSG00000272856.1	-	lincRNA	KNOWN	RP11-710E1.2	1	2	-0.140454
chr4	87473335	87531061	87502198	ENSG00000152583.12	-	protein_coding	KNOWN	SPARCL1	10	12	-0.333796
chr4	87532543	87532677	87532610	ENSG00000281790.1	+	miRNA	NOVEL	AC093906.1	1	1	-0.177848
chr4	87568035	87733956	87650995	ENSG00000249001.5	-	antisense	KNOWN	RP11-742B18.1	4	4	-0.354043
chr4	87608529	87616910	87612719	ENSG00000152591.12	+	protein_coding	KNOWN	DSPP	2	5	-0.428953
chr4	87650307	87664361	87657334	ENSG00000152592.13	+	protein_coding	KNOWN	DMP1	2	6	-0.573589
chr4	87743952	87744053	87744002	ENSG00000200024.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.653194
chr4	87785920	87786371	87786145	ENSG00000249973.2	-	processed_pseudogene	KNOWN	CHCHD2P7	1	1	-0.652547
chr4	87799581	87812435	87806008	ENSG00000029559.6	+	protein_coding	KNOWN	IBSP	1	7	-0.490702
chr4	87821411	87846817	87834114	ENSG00000152595.16	+	protein_coding	KNOWN	MEPE	9	6	-0.292721
chr4	87891843	87894015	87892929	ENSG00000183199.6	+	processed_pseudogene	KNOWN	HSP90AB3P	1	1	-0.191080
chr4	87975650	87983426	87979538	ENSG00000118785.13	+	protein_coding	KNOWN	SPP1	11	8	0.101270
chr4	88000237	88000401	88000319	ENSG00000202000.1	+	snRNA	KNOWN	RNU1-36P	1	1	-0.424799
chr4	88007668	88077777	88042722	ENSG00000118762.7	+	protein_coding	KNOWN	PKD2	7	15	0.034495
chr4	88090264	88231322	88160793	ENSG00000118777.10	-	protein_coding	KNOWN	ABCG2	4	16	-0.127934
chr4	88163579	88163967	88163773	ENSG00000241853.1	+	processed_pseudogene	KNOWN	RP11-147K6.1	1	1	-0.231898
chr4	88201703	88201810	88201756	ENSG00000201707.1	+	snRNA	KNOWN	RNU6-818P	1	1	0.307452
chr4	88206427	88206552	88206489	ENSG00000221440.1	-	snRNA	KNOWN	RNU6ATAC31P	1	1	0.307452
chr4	88220569	88223837	88222203	ENSG00000251285.2	-	processed_pseudogene	KNOWN	RP11-147K6.2	1	2	-0.169336
chr4	88226729	88226829	88226779	ENSG00000199326.1	+	snRNA	KNOWN	RNU6-1298P	1	1	-0.169336
chr4	88257620	88284769	88271194	ENSG00000163644.14	-	protein_coding	KNOWN	PPM1K	10	7	-0.130608
chr4	88275205	88275308	88275256	ENSG00000200469.1	-	snRNA	KNOWN	RNU6-112P	1	1	-0.253936
chr4	88284942	88331421	88308181	ENSG00000246375.2	+	lincRNA	KNOWN	RP11-10L7.1	1	5	-0.217029
chr4	88330176	88330278	88330227	ENSG00000207480.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.044057
chr4	88378739	88443111	88410925	ENSG00000138642.14	+	protein_coding	KNOWN	HERC6	8	23	-0.280246
chr4	88457117	88506163	88481640	ENSG00000138646.8	+	protein_coding	KNOWN	HERC5	5	23	-0.167231
chr4	88493933	88494017	88493975	ENSG00000221079.2	+	miRNA	NOVEL	AC083829.1	1	1	-0.235734
chr4	88508591	88510403	88509497	ENSG00000249934.2	-	processed_pseudogene	KNOWN	RP11-466G12.3	1	1	-0.255201
chr4	88520985	88523813	88522399	ENSG00000145337.4	-	protein_coding	KNOWN	PYURF	1	2	-0.323046
chr4	88521048	88708542	88614795	ENSG00000138641.15	+	protein_coding	KNOWN	HERC3	14	26	-0.076925
chr4	88521573	88521789	88521681	ENSG00000255072.1	-	protein_coding	KNOWN	PIGY	1	1	-0.323046
chr4	88527160	88528170	88527665	ENSG00000249755.2	+	processed_pseudogene	KNOWN	RP11-466G12.2	1	2	-0.323046
chr4	88583666	88583972	88583819	ENSG00000252322.1	-	misc_RNA	KNOWN	RN7SKP244	1	1	-0.091720
chr4	88684848	88684954	88684901	ENSG00000207524.1	-	snRNA	KNOWN	RNU6-33P	1	1	-0.188116
chr4	88695915	88698235	88697075	ENSG00000177432.6	-	protein_coding	KNOWN	NAP1L5	1	1	-0.137795
chr4	88709789	88730103	88719946	ENSG00000248019.2	+	antisense	KNOWN	FAM13A-AS1	2	5	-0.022088
chr4	88710147	88710265	88710206	ENSG00000278151.1	+	misc_RNA	NOVEL	FAM13A-AS1_1	1	1	-0.021964
chr4	88723209	88723316	88723262	ENSG00000276003.1	+	misc_RNA	NOVEL	FAM13A-AS1_2	1	1	-0.021964
chr4	88725955	89111398	88918676	ENSG00000138640.14	-	protein_coding	KNOWN	FAM13A	22	24	-0.123904
chr4	89111500	89114899	89113199	ENSG00000180346.3	+	protein_coding	KNOWN	TIGD2	2	2	-0.250896
chr4	89119284	89119871	89119577	ENSG00000270720.1	+	lincRNA	KNOWN	RP11-84C13.2	1	1	-0.250896
chr4	89130852	89130953	89130902	ENSG00000212226.1	+	snRNA	KNOWN	RNU6-907P	1	1	-0.398147
chr4	89236386	89308010	89272198	ENSG00000185477.4	-	protein_coding	KNOWN	GPRIN3	2	2	-0.392362
chr4	89551356	89726752	89639054	ENSG00000251095.6	+	antisense	KNOWN	RP11-115D19.1	8	6	-0.582283
chr4	89724099	89838315	89781207	ENSG00000145335.15	-	protein_coding	KNOWN	SNCA	13	6	-0.395854
chr4	89743792	89744305	89744048	ENSG00000274238.1	+	antisense	KNOWN	RP11-115D19.3	1	1	-0.541880
chr4	89747802	89755853	89751827	ENSG00000277695.1	+	antisense	KNOWN	RP11-115D19.4	1	4	-0.503424
chr4	89748283	89749154	89748718	ENSG00000276542.1	+	antisense	KNOWN	RP11-115D19.2	1	1	-0.541880
chr4	89836408	89841978	89839193	ENSG00000247775.2	+	antisense	KNOWN	SNCA-AS1	2	4	-0.273005
chr4	89879532	89954629	89917080	ENSG00000138722.9	+	protein_coding	KNOWN	MMRN1	4	9	-0.820567
chr4	90127535	91601913	90864724	ENSG00000184305.14	+	protein_coding	KNOWN	CCSER1	13	11	-0.595311
chr4	90370123	90370427	90370275	ENSG00000252087.1	+	misc_RNA	KNOWN	RN7SKP248	1	1	-0.865448
chr4	90682996	90683123	90683059	ENSG00000251401.2	+	processed_pseudogene	KNOWN	RP11-11N6.1	1	1	-0.733979
chr4	90838903	90839037	90838970	ENSG00000187653.11	-	processed_pseudogene	KNOWN	TMSB4XP8	1	1	-0.703469
chr4	91108023	91112790	91110406	ENSG00000248984.1	-	antisense	KNOWN	AC004054.1	1	2	-0.520343
chr4	91319034	91325306	91322170	ENSG00000249049.1	-	antisense	KNOWN	RP11-763F8.1	1	3	-0.546410
chr4	91603275	91605292	91604283	ENSG00000279013.1	+	TEC	KNOWN	RP11-254A24.2	1	1	-1.039714
chr4	91885046	91885254	91885150	ENSG00000249891.2	-	processed_pseudogene	KNOWN	KRT19P6	1	1	-0.383742
chr4	91887886	91904335	91896110	ENSG00000249052.1	+	lincRNA	KNOWN	RP11-354O24.1	1	4	-0.333777
chr4	92182477	92184052	92183264	ENSG00000248817.1	-	processed_pseudogene	KNOWN	PMPCAP1	1	1	-0.449578
chr4	92260367	92260751	92260559	ENSG00000280056.1	-	TEC	KNOWN	RP11-562F9.3	1	1	-0.297660
chr4	92268767	92277075	92272921	ENSG00000249152.1	-	lincRNA	KNOWN	RP11-562F9.2	1	2	-0.389964
chr4	92297251	92304178	92300714	ENSG00000248511.1	-	lincRNA	KNOWN	RP11-9B6.1	1	3	-0.924310
chr4	92303622	93774556	93039089	ENSG00000152208.11	+	protein_coding	KNOWN	GRID2	8	16	-0.650928
chr4	92702345	92702659	92702502	ENSG00000251449.2	+	processed_pseudogene	KNOWN	MTND1P19	1	1	-0.717677
chr4	92821986	92822918	92822452	ENSG00000249239.2	-	processed_pseudogene	KNOWN	RP11-428L21.2	1	1	-1.021964
chr4	92833685	92838842	92836263	ENSG00000248627.1	-	antisense	KNOWN	RP11-428L21.1	1	2	-0.812660
chr4	92884663	92885107	92884885	ENSG00000248750.2	+	processed_pseudogene	KNOWN	RP11-131K17.1	1	1	-0.502369
chr4	93318623	93319786	93319204	ENSG00000250908.1	-	antisense	KNOWN	RP11-703C10.1	1	2	-0.484509
chr4	93820171	93820280	93820225	ENSG00000252342.1	+	rRNA	KNOWN	RNA5SP164	1	1	-0.467436
chr4	93828753	93830964	93829858	ENSG00000172238.4	+	protein_coding	KNOWN	ATOH1	1	1	-0.304632
chr4	94117792	94207556	94162674	ENSG00000246541.2	-	lincRNA	KNOWN	RP11-363G15.2	1	9	-0.324835
chr4	94195940	94196513	94196226	ENSG00000250897.2	-	processed_pseudogene	KNOWN	HMGB3P15	1	1	-0.531241
chr4	94207611	94291292	94249451	ENSG00000163104.17	+	protein_coding	KNOWN	SMARCAD1	8	25	-0.290734
chr4	94298535	94342876	94320705	ENSG00000163106.10	-	protein_coding	KNOWN	HPGDS	3	6	-0.192119
chr4	94369833	94370163	94369998	ENSG00000241103.1	+	processed_pseudogene	KNOWN	RP11-398J16.1	1	1	-0.418610
chr4	94451857	94668227	94560042	ENSG00000163110.14	+	protein_coding	KNOWN	PDLIM5	23	17	-0.106386
chr4	94675245	94702570	94688907	ENSG00000249951.1	+	lincRNA	KNOWN	RP11-554D13.1	1	2	-0.225691
chr4	94743800	94757533	94750666	ENSG00000249599.1	-	lincRNA	KNOWN	BMPR1B-AS1	1	3	-0.286185
chr4	94757968	95158448	94958208	ENSG00000138696.10	+	protein_coding	KNOWN	BMPR1B	8	13	-0.507424
chr4	95162504	95549206	95355855	ENSG00000182168.14	-	protein_coding	KNOWN	UNC5C	5	16	-0.561720
chr4	95549129	95552457	95550793	ENSG00000271474.1	+	antisense	KNOWN	RP11-710C12.1	1	1	-0.771573
chr4	95644952	95645293	95645122	ENSG00000242936.1	-	processed_pseudogene	KNOWN	RPL30P6	1	1	-0.592806
chr4	95840019	95841474	95840746	ENSG00000163114.5	+	protein_coding	KNOWN	PDHA2	1	1	-0.444509
chr4	95868667	95868764	95868715	ENSG00000200622.1	-	snRNA	KNOWN	RNU6-1059P	1	1	-0.745951
chr4	96152297	96152403	96152350	ENSG00000201744.1	-	snRNA	KNOWN	RNU6-34P	1	1	-0.813793
chr4	96212279	96213100	96212689	ENSG00000250655.1	+	processed_pseudogene	KNOWN	RP11-61G24.1	1	1	-0.743197
chr4	96310701	96818864	96564782	ENSG00000248510.2	+	lincRNA	KNOWN	RP11-145G20.1	2	4	-0.603865
chr4	96348734	96349038	96348886	ENSG00000201640.2	-	misc_RNA	KNOWN	RN7SKP28	1	1	-0.508652
chr4	96902801	96903050	96902925	ENSG00000236764.4	+	processed_pseudogene	KNOWN	COX7A2P2	1	1	-0.677888
chr4	97120701	97135059	97127880	ENSG00000253170.1	+	lincRNA	KNOWN	RP11-431J17.1	1	2	-0.411733
chr4	97184093	98143240	97663666	ENSG00000163116.9	-	protein_coding	KNOWN	STPG2	3	11	-0.591879
chr4	97334635	97633823	97484229	ENSG00000254044.5	-	sense_overlapping	KNOWN	RP11-681L8.1	2	5	-0.624906
chr4	97366926	97490164	97428545	ENSG00000251620.1	+	antisense	KNOWN	STPG2-AS1	1	6	-0.563530
chr4	97916353	97917401	97916877	ENSG00000250293.1	-	processed_pseudogene	KNOWN	CRYZP2	1	1	-0.353952
chr4	98025390	98026240	98025815	ENSG00000242697.2	+	processed_pseudogene	KNOWN	RPL5P12	1	1	-0.400712
chr4	98048555	98049043	98048799	ENSG00000214904.5	+	processed_pseudogene	KNOWN	DUTP8	1	1	-0.589186
chr4	98251688	98261630	98256659	ENSG00000214559.3	-	antisense	KNOWN	RP11-323J4.1	1	2	-0.183188
chr4	98261384	98443861	98352622	ENSG00000138698.14	+	protein_coding	KNOWN	RAP1GDS1	21	15	-0.265320
chr4	98409290	98409763	98409526	ENSG00000242318.1	+	processed_pseudogene	KNOWN	RP11-810D13.1	1	1	-0.558674
chr4	98470367	98658629	98564498	ENSG00000168785.7	-	protein_coding	KNOWN	TSPAN5	10	8	0.057675
chr4	98496364	98509935	98503149	ENSG00000251523.1	+	antisense	KNOWN	RP11-724M22.1	1	4	0.253355
chr4	98658904	98664550	98661727	ENSG00000260641.1	+	antisense	KNOWN	RP11-1299A16.3	1	1	0.188745
chr4	98713804	98713971	98713887	ENSG00000249764.1	-	processed_pseudogene	KNOWN	RP11-1299A16.1	1	1	-0.149016
chr4	98740742	98741231	98740986	ENSG00000227118.3	+	processed_pseudogene	KNOWN	BTF3P13	1	1	-0.320655
chr4	98871684	98930637	98901160	ENSG00000151247.12	-	protein_coding	KNOWN	EIF4E	11	8	0.037977
chr4	98909537	98909848	98909692	ENSG00000249055.1	-	transcribed_processed_pseudogene	KNOWN	TBCAP3	1	1	-0.157036
chr4	98928897	98994994	98961945	ENSG00000263923.1	+	antisense	KNOWN	RP11-571L19.7	1	5	-0.025084
chr4	98929914	98929993	98929953	ENSG00000238449.2	-	miRNA	NOVEL	AC019131.1	1	1	0.266490
chr4	98955982	98956767	98956374	ENSG00000214886.4	+	processed_pseudogene	KNOWN	FAM177A1P1	1	2	-0.298242
chr4	98966815	98966873	98966844	ENSG00000252548.1	-	snRNA	KNOWN	RNU7-149P	1	1	-0.298242
chr4	98976800	98977117	98976958	ENSG00000251437.1	-	processed_pseudogene	KNOWN	NDUFS5P4	1	1	0.075019
chr4	98995620	99062813	99029216	ENSG00000164024.11	+	protein_coding	KNOWN	METAP1	12	11	-0.239749
chr4	98997387	98997460	98997423	ENSG00000265213.1	+	miRNA	KNOWN	MIR3684	1	1	-0.077933
chr4	99022311	99023131	99022721	ENSG00000250496.2	-	processed_pseudogene	KNOWN	ABT1P1	1	1	-0.347540
chr4	99067256	99068125	99067690	ENSG00000272777.1	-	lincRNA	KNOWN	RP11-571L19.8	1	1	-0.180088
chr4	99070978	99088801	99079889	ENSG00000197894.10	-	protein_coding	KNOWN	ADH5	13	9	-0.074980
chr4	99088857	99301356	99195106	ENSG00000246090.6	+	antisense	KNOWN	RP11-696N14.1	7	10	-0.342742
chr4	99123657	99157792	99140724	ENSG00000198099.8	-	protein_coding	KNOWN	ADH4	12	10	-0.336915
chr4	99160514	99161645	99161079	ENSG00000249065.2	-	transcribed_processed_pseudogene	KNOWN	PCNAP1	2	1	-0.268303
chr4	99202638	99219537	99211087	ENSG00000172955.17	-	protein_coding	KNOWN	ADH6	8	9	-0.364148
chr4	99276367	99291028	99283697	ENSG00000187758.7	-	protein_coding	KNOWN	ADH1A	3	9	-0.343395
chr4	99304964	99321401	99313182	ENSG00000196616.12	-	protein_coding	KNOWN	ADH1B	6	10	-0.403632
chr4	99336492	99353027	99344759	ENSG00000248144.5	-	protein_coding	KNOWN	ADH1C	4	9	-0.402663
chr4	99412261	99435737	99423999	ENSG00000196344.11	-	protein_coding	KNOWN	ADH7	6	10	-0.294041
chr4	99469598	99498698	99484148	ENSG00000250300.1	-	unprocessed_pseudogene	KNOWN	RP11-696N14.3	1	4	-0.403288
chr4	99511004	99542303	99526653	ENSG00000138813.9	+	protein_coding	KNOWN	C4orf17	4	10	-0.553496
chr4	99546709	99564032	99555370	ENSG00000145331.13	-	protein_coding	KNOWN	TRMT10A	7	8	-0.574028
chr4	99563761	99623999	99593880	ENSG00000138823.12	+	protein_coding	KNOWN	MTTP	12	19	-0.581611
chr4	99594799	99625913	99610356	ENSG00000248676.1	-	antisense	KNOWN	RP11-766F14.1	1	4	-0.613190
chr4	99636529	99654648	99645588	ENSG00000248713.1	-	protein_coding	KNOWN	RP11-766F14.2	1	2	-0.324373
chr4	99816833	99870154	99843493	ENSG00000070190.12	+	protein_coding	KNOWN	DAPP1	4	10	-0.236744
chr4	99844138	99844696	99844417	ENSG00000279913.1	+	TEC	KNOWN	AP001962.3	1	1	-0.472507
chr4	99878336	99894490	99886413	ENSG00000109270.12	-	protein_coding	KNOWN	LAMTOR3	3	7	-0.407364
chr4	99896248	99946726	99921487	ENSG00000164031.16	-	protein_coding	KNOWN	DNAJB14	12	10	-0.392786
chr4	99942081	99942522	99942301	ENSG00000279098.1	-	TEC	KNOWN	RP11-15B17.4	1	1	-0.560085
chr4	99948086	99950388	99949237	ENSG00000164032.11	-	protein_coding	KNOWN	H2AFZ	6	5	-0.477180
chr4	99950006	100195099	100072552	ENSG00000245322.6	+	antisense	KNOWN	RP11-15B17.1	4	6	-0.268328
chr4	99990737	99991477	99991107	ENSG00000250403.1	-	processed_pseudogene	KNOWN	RP11-15B17.2	1	1	-0.456071
chr4	100041841	100042104	100041972	ENSG00000248820.2	-	processed_pseudogene	KNOWN	DYNLL1P6	1	1	-0.154648
chr4	100129945	100130035	100129990	ENSG00000222196.2	-	miRNA	NOVEL	AC121157.1	1	1	-0.443769
chr4	100185870	100190782	100188326	ENSG00000145358.6	-	protein_coding	KNOWN	DDIT4L	3	3	-0.361250
chr4	100190033	100215505	100202769	ENSG00000249710.1	+	antisense	KNOWN	RP11-588P8.1	1	5	-0.436706
chr4	100395341	100880126	100637733	ENSG00000164035.9	-	protein_coding	KNOWN	EMCN	10	12	-0.474902
chr4	100660279	100675113	100667696	ENSG00000250223.1	-	sense_intronic	KNOWN	LINC01216	1	4	-0.703364
chr4	100778582	100791235	100784908	ENSG00000251219.1	-	sense_intronic	KNOWN	LINC01217	1	2	-0.480093
chr4	100812255	100814280	100813267	ENSG00000251636.1	-	sense_intronic	KNOWN	LINC01218	1	2	-0.502955
chr4	101023409	101348278	101185843	ENSG00000138814.16	-	protein_coding	KNOWN	PPP3CA	9	14	-0.336808
chr4	101240795	101240872	101240833	ENSG00000273882.1	-	miRNA	KNOWN	MIR8066	1	1	-0.847467
chr4	101330302	101330414	101330358	ENSG00000221265.1	-	miRNA	KNOWN	MIR1255A	1	1	-0.015588
chr4	101347780	101348883	101348331	ENSG00000254531.1	+	lincRNA	KNOWN	FLJ20021	2	2	-0.015588
chr4	101411286	102074812	101743049	ENSG00000153064.11	+	protein_coding	KNOWN	BANK1	8	21	-0.482917
chr4	101723876	101723980	101723928	ENSG00000199529.1	+	snRNA	KNOWN	RNU6-462P	1	1	-0.741189
chr4	101972423	101972798	101972610	ENSG00000251149.1	+	processed_pseudogene	KNOWN	MTND5P5	1	1	-0.317121
chr4	101976894	102036903	102006898	ENSG00000251309.1	-	antisense	KNOWN	RP11-498M5.2	1	3	-0.541014
chr4	102158943	102159050	102158996	ENSG00000275124.1	+	miRNA	NOVEL	AP002022.1	1	1	-0.671205
chr4	102251041	102431258	102341149	ENSG00000138821.12	-	protein_coding	KNOWN	SLC39A8	8	11	-0.371846
chr4	102348392	102348691	102348541	ENSG00000241144.3	-	misc_RNA	KNOWN	RN7SL728P	1	1	-0.440356
chr4	102418602	102450010	102434306	ENSG00000248161.5	-	lincRNA	KNOWN	RP11-499E18.1	4	4	-0.332663
chr4	102461250	102462152	102461701	ENSG00000251572.2	+	processed_pseudogene	KNOWN	AF213884.1	1	1	-0.046392
chr4	102500841	102501319	102501080	ENSG00000260651.1	-	antisense	KNOWN	AF213884.2	1	1	-0.194312
chr4	102501329	102617302	102559315	ENSG00000109320.11	+	protein_coding	KNOWN	NFKB1	12	24	-0.217849
chr4	102565875	102565967	102565921	ENSG00000238553.1	-	miRNA	NOVEL	AF213884.3	1	1	-0.249045
chr4	102631488	102760994	102696241	ENSG00000109323.8	-	protein_coding	KNOWN	MANBA	7	17	0.011845
chr4	102662611	102663073	102662842	ENSG00000241981.2	+	processed_pseudogene	KNOWN	AF224669.3	1	1	-0.035243
chr4	102727274	102730721	102728997	ENSG00000230069.3	-	processed_pseudogene	KNOWN	LRRC37A15P	1	2	0.039416
chr4	102728746	102730171	102729458	ENSG00000248971.2	-	processed_pseudogene	KNOWN	KRT8P46	1	1	0.022008
chr4	102734358	102734612	102734485	ENSG00000224207.3	+	processed_pseudogene	KNOWN	RP11-10L12.1	1	1	0.194475
chr4	102751401	102752641	102752021	ENSG00000251288.2	+	processed_pseudogene	KNOWN	RP11-10L12.2	1	1	-0.145047
chr4	102794383	102868896	102831639	ENSG00000109332.19	-	protein_coding	KNOWN	UBE2D3	33	8	-0.189585
chr4	102828055	102844075	102836065	ENSG00000246560.2	+	antisense	KNOWN	RP11-10L12.4	1	2	0.038013
chr4	102837047	102837099	102837073	ENSG00000252739.1	-	snRNA	KNOWN	RNU7-151P	1	1	0.075019
chr4	102868978	102889242	102879110	ENSG00000145354.9	+	protein_coding	KNOWN	CISD2	3	4	0.228071
chr4	102885048	103019739	102952393	ENSG00000164037.16	-	protein_coding	KNOWN	SLC9B1	11	12	-0.425358
chr4	102896725	102898237	102897481	ENSG00000250651.1	+	processed_pseudogene	KNOWN	PABPC1P7	1	1	-0.596475
chr4	102898565	102898621	102898593	ENSG00000276978.1	+	miRNA	NOVEL	AC083826.1	1	1	-0.596475
chr4	102961956	102963327	102962641	ENSG00000249283.3	+	processed_pseudogene	KNOWN	ACTR3BP4	1	2	-0.527736
chr4	103019868	103085829	103052848	ENSG00000164038.14	-	protein_coding	KNOWN	SLC9B2	11	13	-0.043224
chr4	103079435	103099883	103089659	ENSG00000164039.14	-	protein_coding	KNOWN	BDH2	9	10	-0.031811
chr4	103105806	103198409	103152107	ENSG00000138778.11	-	protein_coding	KNOWN	CENPE	8	53	-0.478400
chr4	103256159	103453658	103354908	ENSG00000248740.5	+	lincRNA	KNOWN	RP11-328K4.1	3	4	-0.419050
chr4	103548745	103624534	103586639	ENSG00000251577.5	+	antisense	KNOWN	RP11-297P16.3	2	5	-0.552309
chr4	103550927	103559127	103555027	ENSG00000250920.1	-	lincRNA	KNOWN	RP11-297P16.4	1	4	-0.569025
chr4	103572089	103574082	103573085	ENSG00000251571.1	+	processed_pseudogene	KNOWN	DDX3P3	1	1	-0.717486
chr4	103586031	103719816	103652923	ENSG00000169836.4	-	protein_coding	KNOWN	TACR3	1	5	-0.775324
chr4	103924540	103924641	103924590	ENSG00000252460.1	+	snRNA	KNOWN	RNU6-635P	1	1	-0.465490
chr4	103961616	104036923	103999269	ENSG00000249614.1	+	lincRNA	KNOWN	RP11-703G6.1	1	4	-0.655057
chr4	104230380	104411035	104320707	ENSG00000251170.5	+	lincRNA	KNOWN	RP11-729M20.1	2	6	-0.711217
chr4	104278107	104278191	104278149	ENSG00000215999.2	-	miRNA	NOVEL	AC004052.1	1	1	-1.151462
chr4	104468312	104494901	104481606	ENSG00000168772.10	-	protein_coding	KNOWN	CXXC4	3	3	-0.827598
chr4	104490876	104490954	104490915	ENSG00000272082.1	+	miRNA	NOVEL	AC093628.1	1	1	-0.380761
chr4	104490965	104697592	104594278	ENSG00000245384.1	+	antisense	KNOWN	AC004053.1	1	10	-0.537048
chr4	104556960	104568877	104562918	ENSG00000250670.1	+	lincRNA	KNOWN	AC004063.1	1	4	-0.405508
chr4	104653874	104966793	104810333	ENSG00000248242.1	-	lincRNA	KNOWN	RP11-556I14.2	1	6	-0.525206
chr4	104796128	104796221	104796174	ENSG00000276215.1	+	miRNA	NOVEL	AC004053.2	1	1	-0.259772
chr4	104886118	104886955	104886536	ENSG00000244470.2	-	processed_pseudogene	KNOWN	RP11-395M19.1	1	1	-0.673543
chr4	104907357	105120000	105013678	ENSG00000248373.5	+	lincRNA	KNOWN	RP11-556I14.1	3	4	-0.478315
chr4	104974672	104974771	104974721	ENSG00000251906.2	+	snRNA	KNOWN	RNU6-351P	1	1	-0.564524
chr4	104996900	104997052	104996976	ENSG00000276992.1	-	processed_pseudogene	KNOWN	RP11-556I14.3	1	1	-0.565902
chr4	105102891	105104004	105103447	ENSG00000251473.2	-	processed_pseudogene	KNOWN	AC004069.1	1	1	-0.232206
chr4	105105987	105106094	105106040	ENSG00000252136.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.232206
chr4	105137280	105140619	105138949	ENSG00000251259.1	-	lincRNA	KNOWN	AC004069.2	1	2	-0.251963
chr4	105145875	105279816	105212845	ENSG00000168769.12	+	protein_coding	KNOWN	TET2	10	11	-0.207920
chr4	105171354	105178063	105174708	ENSG00000251586.1	-	antisense	KNOWN	TET2-AS1	1	5	-0.320134
chr4	105293664	105293946	105293805	ENSG00000243383.3	+	misc_RNA	KNOWN	RN7SL89P	1	1	-0.393435
chr4	105369077	105474081	105421579	ENSG00000138777.19	-	protein_coding	KNOWN	PPA2	22	13	-0.356780
chr4	105406997	105407092	105407044	ENSG00000200917.1	+	snRNA	KNOWN	RNU6-553P	1	1	-0.192738
chr4	105484698	105486080	105485389	ENSG00000249264.1	+	processed_pseudogene	KNOWN	EEF1A1P9	1	1	-0.115813
chr4	105526596	105527397	105526996	ENSG00000216425.4	-	processed_pseudogene	KNOWN	AC004066.2	1	1	-0.397046
chr4	105532475	105532630	105532552	ENSG00000250922.1	+	processed_pseudogene	KNOWN	ATP5EP1	1	1	-0.579954
chr4	105540190	105552355	105546272	ENSG00000250522.1	-	antisense	KNOWN	AC004066.3	1	4	-0.571759
chr4	105552620	105708093	105630356	ENSG00000236699.8	+	protein_coding	KNOWN	ARHGEF38	7	14	-0.642693
chr4	105561591	105570238	105565914	ENSG00000249885.1	+	sense_intronic	KNOWN	ARHGEF38-IT1	1	3	-0.536846
chr4	105679050	105680094	105679572	ENSG00000248778.1	-	processed_pseudogene	KNOWN	RP11-311D14.1	1	1	-0.580714
chr4	105682627	105895986	105789306	ENSG00000138785.14	-	protein_coding	KNOWN	INTS12	11	8	-0.436168
chr4	105708778	105847728	105778253	ENSG00000138780.14	+	protein_coding	KNOWN	GSTCD	11	12	-0.385404
chr4	105746245	105827172	105786708	ENSG00000251175.5	-	antisense	KNOWN	RP11-45L9.1	3	6	-0.334342
chr4	105894775	106004027	105949401	ENSG00000168743.12	+	protein_coding	KNOWN	NPNT	16	14	-0.269539
chr4	105927060	105932722	105929891	ENSG00000250740.1	-	antisense	KNOWN	RP11-710F7.2	2	2	-0.313652
chr4	106003317	106022478	106012897	ENSG00000249635.1	-	antisense	KNOWN	RP11-710F7.3	1	4	-0.092004
chr4	106041599	106321495	106181547	ENSG00000145348.16	-	protein_coding	KNOWN	TBCK	20	27	-0.375523
chr4	106315544	106349226	106332385	ENSG00000164022.16	+	protein_coding	KNOWN	AIMP1	4	7	0.037625
chr4	106358398	106367202	106362800	ENSG00000250298.1	-	lincRNA	KNOWN	GIMD1	1	2	-0.550246
chr4	106415706	106415785	106415745	ENSG00000222333.1	-	miRNA	NOVEL	AC093680.1	1	1	-0.247318
chr4	106433624	106453448	106443536	ENSG00000249613.1	+	lincRNA	KNOWN	RP13-612N21.1	1	4	-0.515413
chr4	106836498	106837601	106837049	ENSG00000248915.2	-	processed_pseudogene	KNOWN	ACTR6P1	1	1	-0.750217
chr4	106921802	107283806	107102804	ENSG00000155011.8	-	protein_coding	KNOWN	DKK2	4	6	-0.466961
chr4	107203349	107203924	107203636	ENSG00000213522.4	-	processed_pseudogene	KNOWN	RAC1P5	1	1	-0.173247
chr4	107258700	107301870	107280285	ENSG00000251081.1	+	lincRNA	KNOWN	RP11-713M6.2	1	2	-0.329687
chr4	107435118	107435220	107435169	ENSG00000252470.1	+	snRNA	KNOWN	RNU6-551P	1	1	-0.266903
chr4	107590276	107720452	107655364	ENSG00000138801.8	-	protein_coding	KNOWN	PAPSS1	8	12	-0.145642
chr4	107824563	107915047	107869805	ENSG00000164023.14	+	protein_coding	KNOWN	SGMS2	9	7	-0.215819
chr4	107863479	107978799	107921139	ENSG00000245293.2	-	antisense	KNOWN	RP11-286E11.1	2	7	-0.225373
chr4	107867807	107867910	107867858	ENSG00000222691.1	-	snRNA	KNOWN	RNU6-733P	1	1	-0.274994
chr4	107931369	107953457	107942413	ENSG00000155016.17	+	protein_coding	KNOWN	CYP2U1	3	7	-0.170897
chr4	107936031	107941255	107938643	ENSG00000249604.1	-	antisense	KNOWN	RP11-286E11.2	1	4	-0.195585
chr4	107989714	108035175	108012444	ENSG00000138796.15	+	protein_coding	KNOWN	HADH	10	9	-0.141680
chr4	108047545	108168956	108108250	ENSG00000138795.9	-	protein_coding	KNOWN	LEF1	21	12	-0.313036
chr4	108167525	108256836	108212180	ENSG00000232021.6	+	processed_transcript	KNOWN	LEF1-AS1	7	3	-0.326503
chr4	108407843	108408578	108408210	ENSG00000239939.1	-	processed_pseudogene	KNOWN	RPSAP34	1	1	-0.335962
chr4	108415220	108416639	108415929	ENSG00000278589.1	+	unprocessed_pseudogene	KNOWN	ZACNP1	1	4	-0.208668
chr4	108417705	108419763	108418734	ENSG00000250485.1	-	processed_pseudogene	KNOWN	EXOC7P1	1	1	-0.208668
chr4	108538190	108620460	108579325	ENSG00000234492.4	-	lincRNA	KNOWN	RPL34-AS1	4	4	-0.205155
chr4	108620566	108630412	108625489	ENSG00000109475.16	+	protein_coding	KNOWN	RPL34	7	6	0.113025
chr4	108650584	108667820	108659202	ENSG00000198856.12	+	protein_coding	KNOWN	OSTC	5	5	0.231999
chr4	108652150	108652256	108652203	ENSG00000206601.1	+	snRNA	KNOWN	RNU6-431P	1	1	0.231999
chr4	108742040	108763054	108752547	ENSG00000164089.8	-	protein_coding	KNOWN	ETNPPL	10	13	-0.322863
chr4	108773613	108774020	108773816	ENSG00000249257.1	+	processed_pseudogene	KNOWN	RP11-75N20.2	1	1	-0.149826
chr4	108788745	108789779	108789262	ENSG00000250185.2	-	processed_pseudogene	KNOWN	RCC2P8	1	1	-0.149826
chr4	108789200	108789262	108789231	ENSG00000265522.1	-	miRNA	NOVEL	AC097473.1	1	1	-0.149826
chr4	108810721	109302657	109056689	ENSG00000188517.14	-	protein_coding	KNOWN	COL25A1	9	38	-0.539892
chr4	109016698	109016782	109016740	ENSG00000277189.1	+	miRNA	NOVEL	AC073427.1	1	1	-0.149016
chr4	109303035	109316135	109309585	ENSG00000246774.1	+	lincRNA	KNOWN	AC004051.2	1	3	-0.399085
chr4	109346326	109347459	109346892	ENSG00000249465.1	-	processed_pseudogene	KNOWN	RBMXP4	1	1	-0.504111
chr4	109347475	109433817	109390646	ENSG00000247950.6	-	antisense	KNOWN	SEC24B-AS1	4	8	-0.431772
chr4	109433772	109540896	109487334	ENSG00000138802.11	+	protein_coding	KNOWN	SEC24B	3	25	-0.221203
chr4	109450772	109451068	109450920	ENSG00000243227.3	-	misc_RNA	KNOWN	RN7SL55P	1	1	-0.280426
chr4	109488698	109488795	109488746	ENSG00000207988.1	+	miRNA	KNOWN	MIR576	1	1	-0.127453
chr4	109553243	109554094	109553668	ENSG00000225094.3	-	processed_pseudogene	KNOWN	SETP20	1	1	0.280064
chr4	109555170	109555732	109555451	ENSG00000249965.2	+	processed_pseudogene	KNOWN	CDC42P4	1	1	0.280064
chr4	109560205	109688726	109624465	ENSG00000005059.15	+	protein_coding	KNOWN	CCDC109B	5	8	-0.123195
chr4	109673843	109674124	109673983	ENSG00000248785.1	+	processed_pseudogene	KNOWN	HIGD1AP14	1	1	0.055696
chr4	109688622	109703583	109696102	ENSG00000138794.9	-	protein_coding	KNOWN	CASP6	8	7	-0.253518
chr4	109692004	109692703	109692353	ENSG00000273447.1	+	antisense	KNOWN	AC004067.5	1	1	-0.284863
chr4	109709989	109730077	109720033	ENSG00000123739.10	-	protein_coding	KNOWN	PLA2G12A	4	4	-0.394851
chr4	109740694	109802179	109771436	ENSG00000205403.12	-	protein_coding	KNOWN	CFI	7	14	-0.197255
chr4	109815047	109815410	109815228	ENSG00000272795.1	-	lincRNA	KNOWN	RP11-602N24.3	1	1	-0.379151
chr4	109815510	109824740	109820125	ENSG00000109534.16	+	protein_coding	KNOWN	GAR1	4	7	-0.379151
chr4	109827994	109844604	109836299	ENSG00000180245.4	+	protein_coding	KNOWN	RRH	1	7	-0.356867
chr4	109848202	109872315	109860258	ENSG00000183423.11	+	protein_coding	KNOWN	LRIT3	2	4	-0.462411
chr4	109879070	109879897	109879483	ENSG00000249681.2	-	processed_pseudogene	KNOWN	KRT19P3	1	1	-0.315008
chr4	109912884	110012266	109962575	ENSG00000138798.11	+	protein_coding	KNOWN	EGF	12	24	-0.382568
chr4	109992325	109992431	109992378	ENSG00000207260.1	+	snRNA	KNOWN	RNU6-35P	1	1	-0.402773
chr4	110045846	110199199	110122522	ENSG00000170522.9	-	protein_coding	KNOWN	ELOVL6	8	6	-0.184430
chr4	110117736	110118070	110117903	ENSG00000263940.2	+	misc_RNA	KNOWN	RN7SL275P	1	1	-0.615072
chr4	110146374	110147248	110146811	ENSG00000248200.2	+	processed_pseudogene	KNOWN	RP11-115A14.1	1	2	-0.320391
chr4	110251871	110252099	110251985	ENSG00000166530.8	-	processed_pseudogene	KNOWN	HSBP1P2	1	1	-0.006189
chr4	110264865	110265017	110264941	ENSG00000250594.2	-	processed_pseudogene	KNOWN	RP11-433B3.1	1	1	-0.006189
chr4	110278185	110278291	110278238	ENSG00000212160.1	+	snRNA	KNOWN	RNU6-205P	1	1	-0.046336
chr4	110291644	110293573	110292608	ENSG00000250304.2	+	processed_pseudogene	KNOWN	ZBED1P1	1	1	0.144779
chr4	110298484	110298550	110298517	ENSG00000276369.1	+	miRNA	NOVEL	AC005187.1	1	1	0.144779
chr4	110365733	110565285	110465509	ENSG00000138792.9	+	protein_coding	KNOWN	ENPEP	5	20	-0.360207
chr4	110399773	110400511	110400142	ENSG00000251464.2	-	processed_pseudogene	KNOWN	RPL7L1P13	1	1	-0.598153
chr4	110415898	110418504	110417201	ENSG00000251046.2	+	processed_pseudogene	KNOWN	ZNF969P	1	2	-0.139678
chr4	110433109	110433188	110433148	ENSG00000199894.1	-	snoRNA	NOVEL	snoU2_19	1	1	-0.193917
chr4	110512488	110519505	110515996	ENSG00000250511.1	-	antisense	KNOWN	RP11-380D23.1	1	4	-0.475998
chr4	110595513	110615458	110605485	ENSG00000250103.2	-	lincRNA	KNOWN	RP11-380D23.2	2	4	-0.139805
chr4	110617423	110642123	110629773	ENSG00000164093.15	-	protein_coding	KNOWN	PITX2	13	7	0.004129
chr4	110794403	110797344	110795873	ENSG00000249519.1	+	lincRNA	KNOWN	LINC01438	1	2	-0.553343
chr4	110853376	110853470	110853423	ENSG00000251808.1	-	miRNA	NOVEL	AC024198.1	1	1	-0.291712
chr4	110860582	110860647	110860614	ENSG00000215961.1	-	miRNA	KNOWN	MIR297	1	1	-0.291712
chr4	110945109	110945799	110945454	ENSG00000251483.2	-	processed_pseudogene	KNOWN	LYPLA1P2	1	1	-0.356993
chr4	111063583	111064227	111063905	ENSG00000251312.2	+	processed_pseudogene	KNOWN	AC004062.2	1	1	-0.047283
chr4	111331412	111331518	111331465	ENSG00000200963.1	+	snRNA	KNOWN	RNU6-289P	1	1	-0.227945
chr4	111551854	111552173	111552013	ENSG00000241722.2	+	processed_pseudogene	KNOWN	RP11-255I10.1	1	1	-0.633148
chr4	111640495	111648808	111644651	ENSG00000248656.1	+	lincRNA	KNOWN	RP11-255I10.2	1	4	-0.596547
chr4	111802801	111839886	111821343	ENSG00000250855.1	+	lincRNA	KNOWN	RP11-269F21.1	1	3	-0.708936
chr4	111804418	111809694	111807056	ENSG00000248432.1	-	lincRNA	KNOWN	RP11-269F21.2	1	2	-0.810312
chr4	111826881	112072698	111949789	ENSG00000249815.1	-	lincRNA	KNOWN	RP11-269F21.3	1	3	-0.422030
chr4	112068010	112068526	112068268	ENSG00000250556.1	+	processed_pseudogene	KNOWN	CCDC34P1	1	1	-0.598525
chr4	112077598	112078400	112077999	ENSG00000250307.2	+	processed_pseudogene	KNOWN	TUBB8P3	1	1	-0.201454
chr4	112116510	112116903	112116706	ENSG00000240459.2	-	processed_pseudogene	KNOWN	RP11-477G18.1	1	1	-0.303493
chr4	112145397	112195256	112170326	ENSG00000174749.5	+	protein_coding	KNOWN	C4orf32	1	2	-0.173270
chr4	112171215	112171527	112171371	ENSG00000243280.2	+	processed_pseudogene	KNOWN	RP11-477G18.2	1	1	0.026616
chr4	112229561	112231596	112230578	ENSG00000260526.1	-	antisense	KNOWN	RP11-73K9.2	1	1	-0.183226
chr4	112231737	112270047	112250892	ENSG00000138660.11	+	protein_coding	KNOWN	AP1AR	6	10	-0.221562
chr4	112272968	112273316	112273142	ENSG00000272567.1	-	lincRNA	KNOWN	RP11-73K9.3	1	1	-0.003165
chr4	112274542	112285903	112280222	ENSG00000145365.10	-	protein_coding	KNOWN	TIFA	2	2	-0.003165
chr4	112285509	112442620	112364064	ENSG00000073331.17	+	protein_coding	KNOWN	ALPK1	18	16	-0.134027
chr4	112356135	112359819	112357977	ENSG00000251441.2	+	processed_pseudogene	KNOWN	RTEL1P1	1	1	0.061830
chr4	112455924	112457785	112456854	ENSG00000248697.1	+	processed_pseudogene	KNOWN	TOX4P1	1	1	-0.181027
chr4	112513516	112516172	112514844	ENSG00000178403.3	-	protein_coding	KNOWN	NEUROG2	1	2	-0.092433
chr4	112515385	112546881	112531133	ENSG00000249509.1	+	antisense	KNOWN	RP11-402J6.1	2	4	-0.158735
chr4	112530371	112530672	112530521	ENSG00000248439.2	-	processed_pseudogene	KNOWN	RPL23AP94	1	1	-0.216130
chr4	112539333	112636995	112588164	ENSG00000138658.15	-	protein_coding	KNOWN	ZGRF1	12	28	-0.290387
chr4	112564988	112565398	112565193	ENSG00000250966.2	+	processed_pseudogene	KNOWN	RP11-402J6.3	1	1	0.024429
chr4	112636964	112657592	112647278	ENSG00000174720.15	+	protein_coding	KNOWN	LARP7	15	15	-0.474016
chr4	112646476	112650051	112648263	ENSG00000249532.3	-	antisense	KNOWN	RP11-148B6.1	3	3	-0.544916
chr4	112647874	112647941	112647907	ENSG00000199169.1	-	miRNA	KNOWN	MIR367	1	1	-0.547833
chr4	112648004	112648071	112648037	ENSG00000199145.1	-	miRNA	KNOWN	MIR302D	1	1	-0.547833
chr4	112648183	112648251	112648217	ENSG00000207927.1	-	miRNA	KNOWN	MIR302A	1	1	-0.547833
chr4	112648363	112648430	112648396	ENSG00000199102.1	-	miRNA	KNOWN	MIR302C	1	1	-0.547833
chr4	112648485	112648557	112648521	ENSG00000274389.1	-	miRNA	KNOWN	MIR302B	1	1	-0.547833
chr4	112685055	112685503	112685279	ENSG00000220924.4	+	processed_pseudogene	KNOWN	OSTCP4	1	1	-0.175781
chr4	112693047	112706810	112699928	ENSG00000250046.3	-	lincRNA	KNOWN	RP11-148B6.2	1	2	0.011261
chr4	112693459	112693792	112693625	ENSG00000248633.1	-	transcribed_processed_pseudogene	KNOWN	WRBP1	1	1	0.011261
chr4	112738672	112739106	112738889	ENSG00000241002.1	+	processed_pseudogene	KNOWN	RP11-119H12.1	1	1	-0.391824
chr4	112755816	112755917	112755866	ENSG00000202536.2	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.152427
chr4	112788083	112788878	112788480	ENSG00000241741.1	-	processed_pseudogene	KNOWN	RPL7AP30	1	1	-0.179035
chr4	112797050	112798691	112797870	ENSG00000250500.1	-	processed_pseudogene	KNOWN	RP11-119H12.3	1	2	-0.312157
chr4	112818109	113383740	113100924	ENSG00000145362.17	+	protein_coding	KNOWN	ANK2	27	47	-0.425437
chr4	112826307	112827607	112826957	ENSG00000234841.4	+	processed_pseudogene	KNOWN	RP11-119H12.4	1	1	-0.481743
chr4	112880298	112882330	112881314	ENSG00000251126.2	-	antisense	KNOWN	RP11-119H12.6	1	2	-0.516817
chr4	112881718	112882132	112881925	ENSG00000228814.4	-	transcribed_processed_pseudogene	KNOWN	RP11-119H12.5	1	1	-0.516817
chr4	112979590	113071962	113025776	ENSG00000248152.1	-	antisense	KNOWN	RP11-650J17.1	1	3	-0.437430
chr4	113031287	113034551	113032919	ENSG00000249373.2	-	antisense	KNOWN	RP11-650J17.2	1	3	-0.316093
chr4	113152282	113152362	113152322	ENSG00000275810.1	+	miRNA	KNOWN	MIR8082	1	1	-0.542923
chr4	113214046	113217170	113215608	ENSG00000196656.7	-	transcribed_processed_pseudogene	KNOWN	AC004057.1	2	2	-0.454151
chr4	113419840	113420136	113419988	ENSG00000239279.3	+	misc_RNA	KNOWN	RN7SL184P	1	1	-0.375787
chr4	113420323	113420486	113420404	ENSG00000206820.1	+	snRNA	KNOWN	RNU1-138P	1	1	-0.375787
chr4	113451032	113761927	113606479	ENSG00000145349.16	-	protein_coding	KNOWN	CAMK2D	14	21	-0.274794
chr4	113840050	113840236	113840143	ENSG00000250229.1	+	processed_pseudogene	KNOWN	RP11-397D21.1	1	2	-0.256673
chr4	113900284	113979727	113940005	ENSG00000180801.12	-	protein_coding	KNOWN	ARSJ	3	4	-0.344695
chr4	113943256	113944320	113943788	ENSG00000249304.1	+	antisense	KNOWN	RP11-26P13.2	1	2	-0.363203
chr4	114103938	114104225	114104081	ENSG00000248716.2	+	processed_pseudogene	KNOWN	RP11-362M19.1	1	2	-0.517633
chr4	114598455	114678224	114638339	ENSG00000174607.10	+	protein_coding	KNOWN	UGT8	3	6	-0.630527
chr4	114656759	114656854	114656806	ENSG00000207931.1	+	miRNA	KNOWN	MIR577	1	1	-1.075953
chr4	114713579	114714920	114714249	ENSG00000250215.1	-	processed_pseudogene	KNOWN	CIR1P2	1	1	-0.635636
chr4	114799331	114799629	114799480	ENSG00000240637.3	+	misc_RNA	KNOWN	RN7SL808P	1	1	-0.775701
chr4	114827763	115113876	114970819	ENSG00000138653.9	-	protein_coding	KNOWN	NDST4	4	15	-0.622508
chr4	115142982	115143303	115143142	ENSG00000251308.1	+	processed_pseudogene	KNOWN	MRPS33P3	1	1	-0.666302
chr4	115628812	115629707	115629259	ENSG00000250693.2	+	processed_pseudogene	KNOWN	RPF2P2	1	1	-0.641615
chr4	115764099	115764819	115764459	ENSG00000248488.2	-	processed_pseudogene	KNOWN	PGAM4P2	1	1	-0.644974
chr4	115920707	115921978	115921342	ENSG00000250363.1	+	processed_pseudogene	KNOWN	KRT18P21	1	1	-0.468309
chr4	115922015	116297160	116109587	ENSG00000248173.5	-	lincRNA	KNOWN	RP11-659O3.1	2	3	-0.762671
chr4	116043407	116044045	116043726	ENSG00000250442.1	-	processed_pseudogene	KNOWN	EIF3KP3	1	1	-1.047411
chr4	116095110	116097066	116096088	ENSG00000249259.2	-	transcribed_processed_pseudogene	KNOWN	RP11-166J5.1	1	1	-0.428399
chr4	116193997	116194751	116194374	ENSG00000250627.2	-	processed_pseudogene	KNOWN	TTC39CP1	1	1	-1.047072
chr4	116298876	116300320	116299598	ENSG00000270394.2	+	protein_coding	KNOWN	MTRNR2L13	1	1	-0.925930
chr4	116378919	116379269	116379094	ENSG00000250272.1	+	processed_pseudogene	KNOWN	TRMT112P1	1	1	-0.764883
chr4	116425983	116430892	116428437	ENSG00000248139.2	-	processed_pseudogene	KNOWN	CUL4AP1	1	4	-0.424943
chr4	116489364	116515146	116502255	ENSG00000250791.1	-	lincRNA	KNOWN	RP11-55L3.1	2	5	-0.705587
chr4	116598161	116599611	116598886	ENSG00000213493.3	+	processed_pseudogene	KNOWN	ACTN4P1	1	1	-0.715363
chr4	116839279	116839385	116839332	ENSG00000201752.1	+	snRNA	KNOWN	RNU6-119P	1	1	-0.735827
chr4	116858093	116858973	116858533	ENSG00000271053.1	+	processed_pseudogene	KNOWN	RP11-97F8.1	1	1	-0.746946
chr4	117083554	117085576	117084565	ENSG00000174599.5	-	protein_coding	KNOWN	TRAM1L1	1	1	-0.948422
chr4	117249924	117250188	117250056	ENSG00000223605.1	+	unprocessed_pseudogene	KNOWN	AC107399.1	1	1	-0.714299
chr4	117314597	117360639	117337618	ENSG00000224932.1	-	lincRNA	KNOWN	AC107399.2	1	7	-0.579982
chr4	117360625	117372852	117366738	ENSG00000228358.5	+	lincRNA	KNOWN	AC113617.1	4	5	-0.602946
chr4	117406166	117691188	117548677	ENSG00000236922.9	+	lincRNA	KNOWN	LINC01378	7	5	-0.801524
chr4	117413462	117414279	117413870	ENSG00000237684.1	+	processed_pseudogene	KNOWN	RPSAP35	1	1	-0.717677
chr4	117574512	117576174	117575343	ENSG00000213492.2	-	transcribed_processed_pseudogene	KNOWN	NT5C3AP1	2	1	-1.029999
chr4	117834401	117869948	117852174	ENSG00000229565.1	+	lincRNA	KNOWN	AC108056.1	1	2	-0.637150
chr4	118033618	118258648	118146133	ENSG00000164100.8	+	protein_coding	KNOWN	NDST3	2	14	-0.554301
chr4	118193405	118194751	118194078	ENSG00000251463.2	-	processed_pseudogene	KNOWN	FKBP4P1	1	1	-0.417957
chr4	118278709	118279823	118279266	ENSG00000269893.6	+	lincRNA	KNOWN	SNHG8	5	4	-0.267089
chr4	118279190	118279320	118279255	ENSG00000275994.1	+	snoRNA	KNOWN	SNORA24	1	1	-0.267089
chr4	118280038	118353003	118316520	ENSG00000164099.3	-	protein_coding	KNOWN	PRSS12	4	13	-0.327141
chr4	118400514	118400834	118400674	ENSG00000230671.2	-	processed_pseudogene	KNOWN	NDUFS5P5	1	1	-0.012345
chr4	118460224	118460301	118460262	ENSG00000273716.2	-	processed_pseudogene	KNOWN	RP11-586D5.3	1	1	-0.128134
chr4	118467590	118554204	118510897	ENSG00000154608.13	+	transcribed_unprocessed_pseudogene	KNOWN	CEP170P1	2	17	-0.293450
chr4	118591773	118633729	118612751	ENSG00000260404.3	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-384K6.6	2	10	0.160492
chr4	118606450	118606553	118606501	ENSG00000223225.1	+	snRNA	KNOWN	RNU6-1054P	1	1	0.066606
chr4	118635970	118638782	118637376	ENSG00000248213.3	-	processed_pseudogene	KNOWN	CICP16	1	1	0.389672
chr4	118640673	118640858	118640765	ENSG00000251155.2	+	processed_pseudogene	KNOWN	SEPT14P4	1	1	0.389672
chr4	118664087	118685341	118674714	ENSG00000281731.2	-	lincRNA	KNOWN	RP11-384K6.8	3	7	-0.196604
chr4	118685368	118715433	118700400	ENSG00000145388.14	+	protein_coding	KNOWN	METTL14	6	11	-0.204352
chr4	118722823	118838683	118780753	ENSG00000150961.14	-	protein_coding	KNOWN	SEC24D	14	23	-0.041116
chr4	118850688	119061247	118955967	ENSG00000172403.10	+	protein_coding	KNOWN	SYNPO2	6	5	-0.210738
chr4	119006032	119006401	119006216	ENSG00000249002.2	+	processed_pseudogene	KNOWN	RP11-358D17.1	1	1	-0.129181
chr4	119042024	119043937	119042980	ENSG00000280551.1	+	TEC	KNOWN	RP11-358D17.2	1	1	0.065520
chr4	119135784	119187789	119161786	ENSG00000172399.5	+	protein_coding	KNOWN	MYOZ2	1	6	-0.279827
chr4	119192773	119212644	119202708	ENSG00000178636.8	-	transcribed_processed_pseudogene	KNOWN	RP11-455G16.1	3	4	-0.111096
chr4	119212587	119295517	119254052	ENSG00000145390.11	+	protein_coding	KNOWN	USP53	9	19	-0.124171
chr4	119296419	119304445	119300432	ENSG00000164096.12	-	protein_coding	KNOWN	C4orf3	2	3	0.080404
chr4	119317250	119322390	119319820	ENSG00000145384.3	-	protein_coding	KNOWN	FABP2	1	4	-0.040646
chr4	119334329	119378233	119356281	ENSG00000250412.1	+	unprocessed_pseudogene	KNOWN	KLHL2P1	1	4	-0.431620
chr4	119367562	119367646	119367604	ENSG00000201186.1	+	snRNA	KNOWN	RNU4-33P	1	1	-0.695160
chr4	119391831	119395335	119393583	ENSG00000249244.1	-	unprocessed_pseudogene	KNOWN	RP11-548H18.2	1	1	-0.254459
chr4	119407967	119454638	119431302	ENSG00000283050.1	-	transcribed_unprocessed_pseudogene	KNOWN	GTF2IP12	3	18	0.164157
chr4	119409333	119410233	119409783	ENSG00000260091.1	+	lincRNA	KNOWN	RP11-33B1.4	1	1	-0.076647
chr4	119434005	119434108	119434056	ENSG00000223208.1	-	snRNA	KNOWN	RNU6-1217P	1	1	-0.026190
chr4	119454791	119552025	119503408	ENSG00000245958.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-33B1.1	13	10	-0.222977
chr4	119456350	119457277	119456813	ENSG00000250950.1	+	lincRNA	KNOWN	RP11-33B1.3	1	2	0.024485
chr4	119494395	119628991	119561693	ENSG00000138735.15	-	protein_coding	KNOWN	PDE5A	12	21	-0.243458
chr4	119569699	119569825	119569762	ENSG00000221245.1	+	snoRNA	NOVEL	SNORA11	1	1	-0.683302
chr4	119799089	119804515	119801802	ENSG00000250772.5	-	lincRNA	KNOWN	LINC01365	2	5	-0.742949
chr4	119937557	119963898	119950727	ENSG00000250183.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-96A1.4	1	7	-0.486660
chr4	119939540	119964293	119951916	ENSG00000250392.2	+	lincRNA	KNOWN	RP11-700N1.1	1	2	-0.471964
chr4	119947131	119947232	119947181	ENSG00000200553.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.642348
chr4	120035033	120040615	120037824	ENSG00000253825.1	-	lincRNA	KNOWN	RP11-96A1.5	1	2	-0.469887
chr4	120055608	120067074	120061341	ENSG00000164109.13	-	protein_coding	KNOWN	MAD2L1	5	5	-0.369339
chr4	120066958	120416766	120241862	ENSG00000250938.5	+	antisense	KNOWN	RP11-679C8.2	4	6	-0.621109
chr4	120091046	120092282	120091664	ENSG00000250219.2	-	processed_pseudogene	KNOWN	LTV1P1	1	1	-0.560085
chr4	120342056	120342647	120342351	ENSG00000225665.4	+	processed_pseudogene	KNOWN	SAR1P3	1	1	-0.615226
chr4	120639090	120650796	120644943	ENSG00000249409.1	+	lincRNA	KNOWN	RP11-501E14.1	2	2	-0.871572
chr4	120684919	120922870	120803894	ENSG00000138738.10	-	protein_coding	KNOWN	PRDM5	12	16	-0.445610
chr4	120810469	120810569	120810519	ENSG00000212359.1	+	snRNA	KNOWN	RNU6-550P	1	1	-0.258107
chr4	120895494	120897083	120896288	ENSG00000251609.2	-	processed_pseudogene	KNOWN	SETP12	1	3	-0.742949
chr4	121035613	121073021	121054317	ENSG00000173376.13	-	protein_coding	KNOWN	NDNF	4	4	-0.560170
chr4	121061172	121061478	121061325	ENSG00000223006.1	-	misc_RNA	KNOWN	RN7SKP137	1	1	-0.492971
chr4	121071429	121080476	121075952	ENSG00000250344.1	+	lincRNA	KNOWN	RP11-647P12.1	1	3	-0.283976
chr4	121118299	121118734	121118516	ENSG00000271302.1	+	processed_pseudogene	KNOWN	RP11-647P12.2	1	1	-1.005474
chr4	121131408	121227466	121179437	ENSG00000050730.15	-	protein_coding	KNOWN	TNIP3	7	13	-0.431859
chr4	121192797	121192903	121192850	ENSG00000252183.1	-	snRNA	KNOWN	RNU6-948P	1	1	-0.243192
chr4	121329069	121329170	121329119	ENSG00000207148.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.882322
chr4	121329312	121381059	121355185	ENSG00000186867.10	-	protein_coding	KNOWN	QRFPR	4	7	-0.474905
chr4	121369433	121370345	121369889	ENSG00000213480.3	-	processed_pseudogene	KNOWN	RP11-364P2.2	1	1	-0.516813
chr4	121402587	121402671	121402629	ENSG00000264927.1	-	miRNA	NOVEL	AC093816.1	1	1	-0.514094
chr4	121451541	121451967	121451754	ENSG00000224062.4	+	processed_pseudogene	KNOWN	TUBB4BP5	1	1	-0.446222
chr4	121667955	121697113	121682534	ENSG00000164111.14	-	protein_coding	KNOWN	ANXA5	11	13	-0.102169
chr4	121758933	121765427	121762180	ENSG00000164112.12	-	protein_coding	KNOWN	TMEM155	8	6	-0.214897
chr4	121764585	121766814	121765699	ENSG00000226757.2	+	antisense	KNOWN	PP12613	1	1	-0.214897
chr4	121801317	121817021	121809169	ENSG00000123737.12	+	protein_coding	KNOWN	EXOSC9	12	13	-0.307612
chr4	121816444	121823933	121820188	ENSG00000145386.9	-	protein_coding	KNOWN	CCNA2	2	8	-0.558066
chr4	121824440	121870497	121847468	ENSG00000138686.9	-	protein_coding	KNOWN	BBS7	6	19	-0.251082
chr4	121870583	121872848	121871715	ENSG00000261501.1	+	lincRNA	KNOWN	RP11-63B13.1	1	1	-0.485193
chr4	121879027	121951754	121915390	ENSG00000138741.10	-	protein_coding	KNOWN	TRPC3	5	12	-0.471782
chr4	122077840	122078318	122078079	ENSG00000237868.1	-	processed_pseudogene	KNOWN	AC097533.1	1	1	-0.470741
chr4	122087508	122087811	122087659	ENSG00000241037.3	-	misc_RNA	KNOWN	RN7SL335P	1	1	-0.470741
chr4	122152333	122362758	122257545	ENSG00000138688.15	+	protein_coding	KNOWN	KIAA1109	16	86	-0.585241
chr4	122378966	122429802	122404384	ENSG00000164113.10	+	protein_coding	KNOWN	ADAD1	7	13	-0.519849
chr4	122451470	122456725	122454097	ENSG00000109471.4	-	protein_coding	KNOWN	IL2	2	4	-0.991424
chr4	122612628	122621069	122616848	ENSG00000138684.7	-	protein_coding	KNOWN	IL21	2	5	-0.067949
chr4	122618983	122689156	122654069	ENSG00000227145.1	+	antisense	KNOWN	IL21-AS1	1	11	-0.273177
chr4	122730548	122732193	122731370	ENSG00000224786.1	-	unitary_pseudogene	KNOWN	CETN4P	1	4	-0.148212
chr4	122732702	122744943	122738822	ENSG00000181004.9	+	protein_coding	KNOWN	BBS12	3	3	-0.148212
chr4	122815771	122816117	122815944	ENSG00000244083.1	-	processed_pseudogene	KNOWN	RP11-170N16.1	1	1	-0.282404
chr4	122826708	122898236	122862472	ENSG00000138685.12	+	protein_coding	KNOWN	FGF2	3	3	-0.062089
chr4	122827014	122827090	122827052	ENSG00000253069.1	+	miRNA	NOVEL	AC021205.1	1	1	-0.282404
chr4	122840343	122840690	122840516	ENSG00000240775.1	+	processed_pseudogene	KNOWN	RP11-170N16.2	1	1	-0.055907
chr4	122881878	122884712	122883295	ENSG00000273007.1	-	antisense	KNOWN	RP11-170N16.3	1	2	0.214476
chr4	122888697	122922968	122905832	ENSG00000170917.13	-	protein_coding	KNOWN	NUDT6	8	5	-0.216856
chr4	122923074	123319450	123121262	ENSG00000145375.7	+	protein_coding	KNOWN	SPATA5	2	16	-0.265262
chr4	122977895	122977972	122977933	ENSG00000276962.1	-	miRNA	NOVEL	AC021205.2	1	1	-0.014208
chr4	123007583	123007672	123007627	ENSG00000216154.2	+	miRNA	NOVEL	AC109357.1	1	1	-0.524680
chr4	123259949	123260118	123260033	ENSG00000250322.2	-	processed_pseudogene	KNOWN	CTB-51E13.1	1	1	-0.514997
chr4	123396795	123403760	123400277	ENSG00000164056.10	+	protein_coding	KNOWN	SPRY1	8	3	-0.525637
chr4	123490268	123522106	123506187	ENSG00000249125.1	+	lincRNA	KNOWN	RP11-381N20.2	1	3	-0.084535
chr4	123505279	123527525	123516402	ENSG00000251526.1	+	lincRNA	KNOWN	RP11-381N20.1	1	3	-0.090473
chr4	123650267	123930406	123790336	ENSG00000249464.5	+	lincRNA	KNOWN	LINC01091	4	6	-0.296891
chr4	123744923	123745673	123745298	ENSG00000226655.1	-	lincRNA	KNOWN	AC096732.2	1	3	-0.176298
chr4	123745750	123746226	123745988	ENSG00000228489.1	-	processed_pseudogene	KNOWN	RPL21P50	1	1	-0.176298
chr4	123861860	123862015	123861937	ENSG00000250458.2	-	processed_pseudogene	KNOWN	RP11-107E21.1	1	1	-0.524093
chr4	124062462	124062990	124062726	ENSG00000250484.2	+	processed_pseudogene	KNOWN	RP11-728C8.1	1	1	-0.195705
chr4	124149377	124252044	124200710	ENSG00000249837.1	-	lincRNA	KNOWN	CTD-2325B11.1	1	5	-0.463261
chr4	124435750	124437120	124436435	ENSG00000248506.1	-	processed_pseudogene	KNOWN	RP11-93I21.2	1	1	-0.349714
chr4	124462863	124463790	124463326	ENSG00000248565.2	-	processed_pseudogene	KNOWN	TECRP2	1	1	-0.278120
chr4	124499942	124558434	124529188	ENSG00000261083.1	-	lincRNA	KNOWN	RP11-93I21.3	1	9	-0.480996
chr4	124664052	124712732	124688392	ENSG00000151458.11	-	protein_coding	KNOWN	ANKRD50	2	5	-0.587138
chr4	125316399	125492932	125404665	ENSG00000196159.11	+	protein_coding	KNOWN	FAT4	3	17	-0.572267
chr4	125362819	125362929	125362874	ENSG00000201297.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.629544
chr4	125676718	125752793	125714755	ENSG00000250149.1	+	lincRNA	KNOWN	RP11-399F2.2	1	2	-0.528178
chr4	125681177	125683668	125682422	ENSG00000251436.2	-	processed_pseudogene	KNOWN	NUP58P1	1	2	-0.539513
chr4	125723267	125724217	125723742	ENSG00000249555.2	-	processed_pseudogene	KNOWN	TMEM248P1	1	1	-0.727854
chr4	126070708	126072004	126071356	ENSG00000251649.1	+	lincRNA	KNOWN	RP11-318I4.1	1	2	-0.659621
chr4	126106139	126106923	126106531	ENSG00000251005.1	-	processed_pseudogene	KNOWN	RP11-318I4.2	1	2	-0.492971
chr4	126563509	126564776	126564142	ENSG00000223620.3	+	processed_pseudogene	KNOWN	RBM48P1	1	2	-0.935489
chr4	127028107	127028219	127028163	ENSG00000199862.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.319822
chr4	127043430	127077762	127060596	ENSG00000250945.1	-	lincRNA	KNOWN	RP11-810P8.1	1	3	-0.357576
chr4	127096891	127470569	127283730	ENSG00000248491.5	-	lincRNA	KNOWN	RP11-125O18.1	3	6	-0.555879
chr4	127493505	127493828	127493666	ENSG00000248209.1	+	processed_pseudogene	KNOWN	RP11-18O11.1	1	1	-0.916673
chr4	127498327	127498807	127498567	ENSG00000249795.1	+	processed_pseudogene	KNOWN	RP11-18O11.2	1	1	-0.916673
chr4	127623271	127726737	127675004	ENSG00000164066.12	+	protein_coding	KNOWN	INTU	8	18	-0.539165
chr4	127730378	127774299	127752338	ENSG00000151475.5	+	protein_coding	KNOWN	SLC25A31	1	6	-0.377720
chr4	127781821	127840733	127811277	ENSG00000164070.11	+	protein_coding	KNOWN	HSPA4L	5	20	-0.573656
chr4	127809170	127809477	127809323	ENSG00000282855.1	+	processed_pseudogene	KNOWN	RP11-50D9.4	1	1	-0.452707
chr4	127812720	127813200	127812960	ENSG00000244021.4	-	processed_pseudogene	KNOWN	RP11-50D9.1	1	1	-0.651036
chr4	127840198	127844040	127842119	ENSG00000261668.1	-	antisense	KNOWN	RP11-50D9.3	1	1	-0.586080
chr4	127880861	127899195	127890028	ENSG00000142731.10	+	protein_coding	KNOWN	PLK4	11	16	-0.203304
chr4	127891991	127892082	127892036	ENSG00000251821.1	+	snRNA	KNOWN	RNU6-583P	1	1	-0.102095
chr4	127917805	127965995	127941900	ENSG00000164073.9	-	protein_coding	KNOWN	MFSD8	8	13	-0.211039
chr4	127965306	128039711	128002508	ENSG00000164074.14	+	protein_coding	KNOWN	ABHD18	6	13	-0.280496
chr4	128061268	128222931	128142099	ENSG00000138709.17	+	protein_coding	KNOWN	LARP1B	10	20	-0.227891
chr4	128069014	128069612	128069313	ENSG00000241651.4	-	processed_pseudogene	KNOWN	RP11-214O14.1	1	1	-0.099540
chr4	128155389	128156204	128155796	ENSG00000248394.1	+	processed_pseudogene	KNOWN	FOSL1P1	1	1	-0.084886
chr4	128269237	128288829	128279033	ENSG00000164040.16	-	protein_coding	KNOWN	PGRMC2	8	4	0.132867
chr4	128292751	128519394	128406072	ENSG00000251432.6	+	lincRNA	KNOWN	RP11-420A23.1	5	9	-0.085000
chr4	128552590	128553416	128553003	ENSG00000273077.1	-	lincRNA	KNOWN	RP11-130C6.1	1	2	0.084214
chr4	128567972	128570531	128569251	ENSG00000248187.1	-	lincRNA	KNOWN	RP11-184M15.1	1	2	0.090844
chr4	128582999	128601407	128592203	ENSG00000248802.1	-	lincRNA	KNOWN	RP11-184M15.2	2	2	-0.064885
chr4	128768228	128769948	128769088	ENSG00000280711.1	+	lincRNA	KNOWN	JADRR	1	1	-0.177615
chr4	128809623	128875224	128842423	ENSG00000077684.15	+	protein_coding	KNOWN	JADE1	14	11	-0.041930
chr4	128864921	129093607	128979264	ENSG00000151466.11	-	protein_coding	KNOWN	SCLT1	9	21	-0.456752
chr4	128944628	128944956	128944792	ENSG00000275647.1	+	processed_pseudogene	KNOWN	RP11-209D20.2	1	1	-0.569592
chr4	129041766	129041877	129041821	ENSG00000281369.1	+	pseudogene	NOVEL	AC093826.1	1	2	-0.644974
chr4	129093317	129116640	129104978	ENSG00000151470.12	+	protein_coding	KNOWN	C4orf33	6	6	-0.424519
chr4	129133106	129134098	129133602	ENSG00000251345.2	+	processed_pseudogene	KNOWN	RP11-392L5.2	1	1	-0.543955
chr4	129135926	129139740	129137833	ENSG00000248958.2	-	processed_pseudogene	KNOWN	ZSWIM5P3	1	3	-0.543955
chr4	129177386	129179094	129178240	ENSG00000251195.1	+	processed_pseudogene	KNOWN	RP11-378N18.1	1	2	-0.574271
chr4	129299175	129305022	129302098	ENSG00000250193.1	-	lincRNA	KNOWN	RP11-419L4.1	1	2	-0.265560
chr4	129724171	129771481	129747826	ENSG00000246876.6	-	lincRNA	KNOWN	RP11-519M16.1	2	6	-0.700617
chr4	129771659	129955368	129863513	ENSG00000249618.5	+	lincRNA	KNOWN	RP11-422J15.1	4	17	-0.755036
chr4	129903010	129904163	129903586	ENSG00000234125.5	+	processed_pseudogene	KNOWN	EEF1GP8	1	1	-0.483868
chr4	130376229	130386371	130381300	ENSG00000251326.1	+	lincRNA	KNOWN	RP11-521E5.1	1	2	-0.626237
chr4	130494673	130495285	130494979	ENSG00000248877.2	+	processed_pseudogene	KNOWN	PGBD4P4	1	1	-0.591273
chr4	130503357	130504344	130503850	ENSG00000249018.2	-	processed_pseudogene	KNOWN	GAPDHP56	1	1	-0.591273
chr4	130808507	130811933	130810220	ENSG00000280059.1	+	TEC	KNOWN	RP11-401I19.2	1	1	-0.994980
chr4	130881027	130885641	130883334	ENSG00000250503.1	-	lincRNA	KNOWN	RP11-401I19.1	1	2	-0.959234
chr4	131112748	131113255	131113001	ENSG00000250213.2	+	processed_pseudogene	KNOWN	RP11-488I4.2	1	2	-0.738950
chr4	131273242	131273348	131273295	ENSG00000206782.1	+	snRNA	KNOWN	RNU6-224P	1	1	-0.644974
chr4	131380013	131541397	131460705	ENSG00000250102.5	+	lincRNA	KNOWN	RP11-314N14.1	2	4	-0.639328
chr4	131540281	131540489	131540385	ENSG00000248715.2	+	processed_pseudogene	KNOWN	RP11-758B24.1	1	1	-0.721354
chr4	131720260	131720543	131720401	ENSG00000241392.3	-	misc_RNA	KNOWN	RN7SL205P	1	1	-0.908008
chr4	131768140	131768249	131768194	ENSG00000252014.1	+	snoRNA	NOVEL	SNORA70	1	1	0.432019
chr4	131768233	131768578	131768405	ENSG00000249416.2	+	processed_pseudogene	KNOWN	RP11-614F17.1	1	1	0.432019
chr4	131773302	131791482	131782392	ENSG00000251676.1	+	lincRNA	KNOWN	RP11-614F17.2	3	3	0.025590
chr4	131857343	131857913	131857628	ENSG00000184139.8	-	processed_pseudogene	KNOWN	RPL7AP28	1	1	-0.650512
chr4	131930031	131975952	131952991	ENSG00000251555.1	-	lincRNA	KNOWN	RP11-745L13.2	1	3	-0.529196
chr4	132004810	132124031	132064420	ENSG00000251598.1	-	lincRNA	KNOWN	RP11-789C2.1	1	3	-0.690719
chr4	132027175	132028434	132027804	ENSG00000249463.1	-	lincRNA	KNOWN	RP11-1E22.1	1	2	-0.638618
chr4	132367786	132368479	132368132	ENSG00000251051.1	-	processed_pseudogene	KNOWN	ELL2P2	1	1	-0.447741
chr4	132435802	132447235	132441518	ENSG00000248369.1	-	lincRNA	KNOWN	RP11-62N21.1	1	3	-1.001790
chr4	132591089	132678503	132634796	ENSG00000251398.1	+	lincRNA	KNOWN	LINC01256	1	4	-0.796281
chr4	132592084	132592536	132592310	ENSG00000249038.2	+	processed_pseudogene	KNOWN	AARSP1	1	1	-0.965724
chr4	132836772	132981677	132909224	ENSG00000251488.1	-	lincRNA	KNOWN	RP11-404I7.2	1	3	-0.642012
chr4	132985510	132988677	132987093	ENSG00000249513.2	-	lincRNA	KNOWN	RP11-404I7.1	1	3	-0.597079
chr4	133075311	133149116	133112213	ENSG00000250241.5	-	lincRNA	KNOWN	RP11-9G1.3	3	9	-0.601352
chr4	133124104	133126063	133125083	ENSG00000248735.2	+	processed_pseudogene	KNOWN	R3HDM2P1	1	1	-0.492971
chr4	133149315	133208606	133178960	ENSG00000138650.8	+	protein_coding	KNOWN	PCDH10	3	5	-0.495778
chr4	133560856	133560934	133560895	ENSG00000221637.1	-	miRNA	NOVEL	AC105252.1	1	1	-0.522117
chr4	133574566	133575208	133574887	ENSG00000250191.1	-	unprocessed_pseudogene	KNOWN	RP11-285A15.1	1	3	-0.484933
chr4	133708226	133708335	133708280	ENSG00000281057.1	+	miRNA	NOVEL	AC118562.1	1	1	-0.573589
chr4	133871246	134010690	133940968	ENSG00000251388.1	-	lincRNA	KNOWN	RP11-427M20.1	1	4	-0.577317
chr4	134043467	134043553	134043510	ENSG00000266277.1	-	miRNA	NOVEL	AC096763.1	1	1	-0.262673
chr4	134196333	134201748	134199040	ENSG00000254535.3	-	protein_coding	KNOWN	PABPC4L	1	2	-0.816378
chr4	134255173	134327473	134291323	ENSG00000251199.5	-	lincRNA	KNOWN	RP11-400D2.2	3	3	-0.767767
chr4	134327063	134328798	134327930	ENSG00000248191.1	+	processed_pseudogene	KNOWN	PES1P1	1	1	-0.556536
chr4	134423867	134457852	134440859	ENSG00000251291.1	+	lincRNA	KNOWN	RP11-400D2.3	1	3	-0.632441
chr4	134759399	134817289	134788344	ENSG00000249000.1	+	lincRNA	KNOWN	CTD-2012I17.1	1	5	-0.363405
chr4	134932889	134934131	134933510	ENSG00000249847.1	-	lincRNA	KNOWN	RP11-192C21.2	1	2	-0.380944
chr4	134944275	134944523	134944399	ENSG00000251228.1	+	processed_pseudogene	KNOWN	RP11-192C21.3	1	1	-0.380944
chr4	134952259	134952889	134952574	ENSG00000241411.1	-	processed_pseudogene	KNOWN	RP11-192C21.1	1	1	-0.872819
chr4	135045464	135046850	135046157	ENSG00000250144.1	+	processed_pseudogene	KNOWN	RP11-553P9.1	1	1	-0.869940
chr4	135067233	135097658	135082445	ENSG00000248434.1	+	lincRNA	KNOWN	RP11-553P9.2	3	4	-0.683523
chr4	135112905	135123779	135118342	ENSG00000248456.1	-	lincRNA	KNOWN	RP11-553P9.3	2	3	-0.492971
chr4	135371177	135371924	135371550	ENSG00000250834.1	-	processed_pseudogene	KNOWN	KRT18P54	1	1	-0.539040
chr4	135371590	135371681	135371635	ENSG00000207849.2	-	miRNA	NOVEL	AC108867.1	1	1	-0.539040
chr4	135565117	135567157	135566137	ENSG00000248104.1	-	processed_pseudogene	KNOWN	TARS2P1	1	1	-0.784019
chr4	135792384	135805904	135799144	ENSG00000250865.1	-	lincRNA	KNOWN	RP11-780O17.1	1	3	-0.801093
chr4	135866983	135913680	135890331	ENSG00000248330.5	-	lincRNA	KNOWN	LINC00613	3	4	-0.881419
chr4	135995929	135996092	135996010	ENSG00000207322.1	-	snRNA	KNOWN	RNU1-89P	1	1	-0.562873
chr4	136004509	136004902	136004705	ENSG00000251492.1	-	processed_pseudogene	KNOWN	RP11-782E2.2	1	1	-0.562873
chr4	136097797	136099240	136098518	ENSG00000261166.1	-	lincRNA	KNOWN	RP11-775H9.3	1	1	-0.797305
chr4	136118675	136395471	136257073	ENSG00000251567.5	-	lincRNA	KNOWN	RP11-775H9.2	2	4	-0.679019
chr4	136125909	136138874	136132391	ENSG00000250665.1	+	lincRNA	KNOWN	RP11-775H9.1	1	3	-0.681425
chr4	136355110	136356336	136355723	ENSG00000249311.4	-	processed_pseudogene	KNOWN	TERF1P3	1	1	-0.240205
chr4	136553236	136553739	136553487	ENSG00000279749.1	+	TEC	KNOWN	RP11-625B21.1	1	1	-0.916570
chr4	136707178	136707261	136707219	ENSG00000264362.1	-	miRNA	NOVEL	AC093875.1	1	1	-0.741189
chr4	136796722	137212799	137004760	ENSG00000248869.5	-	lincRNA	KNOWN	RP11-138I17.1	2	4	-0.698402
chr4	137193756	137198367	137196061	ENSG00000250341.1	+	lincRNA	KNOWN	RP11-785F11.1	1	2	-0.547261
chr4	137228126	137228231	137228178	ENSG00000222526.2	+	miRNA	NOVEL	AC060835.1	1	1	-0.591151
chr4	137301001	137301187	137301094	ENSG00000250813.1	-	processed_pseudogene	KNOWN	SERF1AP1	1	1	-0.477374
chr4	137425426	137425864	137425645	ENSG00000251440.2	-	processed_pseudogene	KNOWN	STMN1P2	1	1	-0.708399
chr4	137448087	137448501	137448294	ENSG00000213448.3	+	processed_pseudogene	KNOWN	RPS23P2	1	1	-0.037888
chr4	137518918	137532494	137525706	ENSG00000189184.11	-	protein_coding	KNOWN	PCDH18	8	5	-0.476742
chr4	137545731	137603430	137574580	ENSG00000251632.1	+	lincRNA	KNOWN	RP11-714L20.1	1	2	-0.567768
chr4	137601899	137602433	137602166	ENSG00000280352.1	-	TEC	KNOWN	RP13-884E18.3	1	1	-0.668542
chr4	137645265	137655174	137650219	ENSG00000250126.1	-	lincRNA	KNOWN	RP13-884E18.2	1	4	-0.427067
chr4	137690477	137734977	137712727	ENSG00000250777.1	-	lincRNA	KNOWN	RP13-884E18.4	1	5	-0.451396
chr4	137807706	137816402	137812054	ENSG00000250034.1	+	lincRNA	KNOWN	RP11-793B23.1	1	2	-0.677349
chr4	138027422	138130709	138079065	ENSG00000248307.5	-	lincRNA	KNOWN	LINC00616	5	11	-0.298896
chr4	138057464	138178177	138117820	ENSG00000250033.5	+	processed_transcript	KNOWN	SLC7A11-AS1	5	7	-0.386705
chr4	138164097	138242349	138203223	ENSG00000151012.13	-	protein_coding	KNOWN	SLC7A11	2	12	-0.351397
chr4	138277115	138281784	138279449	ENSG00000249091.1	-	lincRNA	KNOWN	RP11-733C7.1	1	2	-0.075303
chr4	138298856	138312658	138305757	ENSG00000248397.1	-	lincRNA	KNOWN	LINC00498	1	2	-0.420337
chr4	138309711	138424344	138367027	ENSG00000251372.5	+	lincRNA	KNOWN	LINC00499	4	4	-0.375347
chr4	138337530	138337588	138337559	ENSG00000281539.1	+	snRNA	NOVEL	U7	1	1	-0.388634
chr4	138425523	138436869	138431196	ENSG00000249381.1	+	lincRNA	KNOWN	LINC00500	1	2	-0.487021
chr4	138481255	138482096	138481675	ENSG00000248305.1	-	processed_pseudogene	KNOWN	RP11-310A13.2	1	1	-0.573272
chr4	138560704	138561941	138561322	ENSG00000248795.1	+	processed_pseudogene	KNOWN	RP11-173E2.1	1	1	-0.290624
chr4	138664725	138665569	138665147	ENSG00000250977.1	-	lincRNA	KNOWN	RP11-173E2.2	1	2	-0.239990
chr4	138773550	138801639	138787594	ENSG00000250501.2	+	lincRNA	KNOWN	RP11-98O2.1	2	4	-0.366943
chr4	138811678	138811766	138811722	ENSG00000238971.1	-	miRNA	NOVEL	AC093766.1	1	1	-0.795898
chr4	138819954	139012646	138916300	ENSG00000250195.1	-	antisense	KNOWN	RP11-371F15.3	3	3	-0.211125
chr4	138923930	138924232	138924081	ENSG00000250577.1	-	lincRNA	KNOWN	RP11-577B7.1	1	1	-0.393435
chr4	138988030	138988288	138988159	ENSG00000280976.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.634724
chr4	139015789	139045939	139030864	ENSG00000151014.5	+	protein_coding	KNOWN	NOCT	3	3	0.068270
chr4	139017493	139017579	139017536	ENSG00000264953.1	-	miRNA	NOVEL	AC093602.1	1	1	-0.043785
chr4	139028112	139177218	139102665	ENSG00000109381.19	-	protein_coding	KNOWN	ELF2	13	10	-0.122174
chr4	139055475	139055578	139055526	ENSG00000252503.1	+	snRNA	KNOWN	RNU6-531P	1	1	-0.362847
chr4	139100377	139100658	139100517	ENSG00000240723.3	+	misc_RNA	KNOWN	RN7SL382P	1	1	-0.103264
chr4	139114930	139115374	139115152	ENSG00000179967.11	-	processed_pseudogene	KNOWN	PPP1R14BP3	1	1	0.139298
chr4	139155153	139155444	139155298	ENSG00000276396.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.019842
chr4	139185441	139185746	139185593	ENSG00000265892.2	+	misc_RNA	KNOWN	RN7SL311P	1	1	-0.008120
chr4	139200395	139200513	139200454	ENSG00000207384.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.014923
chr4	139231026	139231119	139231072	ENSG00000252362.1	-	snRNA	KNOWN	RNU6-506P	1	1	0.044686
chr4	139256657	139256760	139256708	ENSG00000206722.1	-	snRNA	KNOWN	RNU6-1074P	1	1	0.133812
chr4	139266163	139280338	139273250	ENSG00000137463.4	-	protein_coding	KNOWN	MGARP	1	4	0.076326
chr4	139266880	139302551	139284715	ENSG00000109390.11	-	protein_coding	KNOWN	NDUFC1	11	6	0.022039
chr4	139301455	139420033	139360744	ENSG00000164134.12	+	protein_coding	KNOWN	NAA15	8	20	-0.017353
chr4	139318378	139318486	139318432	ENSG00000200520.1	+	snRNA	KNOWN	RNU6-1214P	1	1	-0.052398
chr4	139411927	139454034	139432980	ENSG00000273247.5	-	antisense	KNOWN	RP11-83A24.2	5	4	-0.043358
chr4	139426299	139430884	139428591	ENSG00000248863.2	-	transcribed_processed_pseudogene	KNOWN	RP11-83A24.1	2	2	0.042045
chr4	139436368	139436494	139436431	ENSG00000239005.1	-	snoRNA	NOVEL	ACA64	1	1	-0.200189
chr4	139453232	139476609	139464920	ENSG00000172007.5	+	protein_coding	KNOWN	RAB33B	2	2	0.048744
chr4	139495941	139606699	139551320	ENSG00000145391.13	-	protein_coding	KNOWN	SETD7	7	8	0.022818
chr4	139546266	139546727	139546496	ENSG00000249302.2	+	processed_pseudogene	KNOWN	FTH1P24	1	1	-0.038856
chr4	139556799	139557643	139557221	ENSG00000272717.1	+	antisense	KNOWN	RP11-342I1.2	1	1	0.164748
chr4	139618136	139623232	139620684	ENSG00000261268.1	-	lincRNA	KNOWN	RP11-308D13.3	1	2	-0.252767
chr4	139665768	139740745	139703256	ENSG00000085871.8	+	protein_coding	KNOWN	MGST2	7	7	-0.014197
chr4	139685127	139685427	139685277	ENSG00000201533.1	-	misc_RNA	KNOWN	RN7SKP237	1	1	-0.104866
chr4	139698144	139698554	139698349	ENSG00000178458.5	-	processed_pseudogene	KNOWN	H3F3AP6	1	1	0.010564
chr4	139716753	140154184	139935468	ENSG00000196782.12	-	protein_coding	KNOWN	MAML3	3	5	-0.132789
chr4	139794125	139794433	139794279	ENSG00000252233.1	-	misc_RNA	KNOWN	RN7SKP253	1	1	-0.385781
chr4	140128015	140134565	140131290	ENSG00000250698.1	+	antisense	KNOWN	RP11-392B6.1	1	3	-0.134442
chr4	140257286	140385726	140321506	ENSG00000153130.17	+	protein_coding	KNOWN	SCOC	11	5	-0.077643
chr4	140283724	140373381	140328552	ENSG00000196951.10	-	antisense	KNOWN	SCOC-AS1	3	5	-0.091356
chr4	140314163	140314550	140314356	ENSG00000249754.2	-	processed_pseudogene	KNOWN	RP11-425I13.2	1	1	-0.116761
chr4	140366240	140366861	140366550	ENSG00000241923.2	-	processed_pseudogene	KNOWN	RPL14P3	1	1	0.145431
chr4	140388455	140427968	140408211	ENSG00000153132.12	-	protein_coding	KNOWN	CLGN	3	16	-0.470406
chr4	140442262	140498377	140470319	ENSG00000205301.11	-	protein_coding	KNOWN	MGAT4D	9	11	-0.791359
chr4	140498402	140501330	140499866	ENSG00000280262.1	+	TEC	KNOWN	RP11-542P2.2	1	1	-0.505249
chr4	140524158	140553770	140538964	ENSG00000179387.9	+	protein_coding	KNOWN	ELMOD2	8	9	-0.450923
chr4	140559434	140568805	140564119	ENSG00000109424.3	-	protein_coding	KNOWN	UCP1	1	6	-0.340449
chr4	140577925	140578222	140578073	ENSG00000242102.3	+	misc_RNA	KNOWN	RN7SL152P	1	1	-0.399397
chr4	140600401	140600575	140600488	ENSG00000248621.2	-	processed_pseudogene	KNOWN	RP11-5K16.3	1	1	-0.390509
chr4	140620765	140756120	140688442	ENSG00000109436.7	-	protein_coding	KNOWN	TBC1D9	3	21	-0.124082
chr4	140641840	140645489	140643664	ENSG00000249661.1	-	processed_pseudogene	KNOWN	TNRC18P1	1	1	0.181075
chr4	140700835	140700942	140700888	ENSG00000207155.1	-	misc_RNA	KNOWN	RNY1P14	1	1	-0.440229
chr4	140712168	140716081	140714124	ENSG00000248335.1	+	antisense	KNOWN	RP11-102N12.2	1	2	-0.040112
chr4	140756528	140757921	140757224	ENSG00000273472.1	+	lincRNA	KNOWN	RP11-102N12.3	1	1	0.149707
chr4	140779039	140779141	140779090	ENSG00000222613.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.249045
chr4	140859807	141212877	141036342	ENSG00000170153.10	-	protein_coding	KNOWN	RNF150	6	8	-0.239309
chr4	141220887	141234697	141227792	ENSG00000109445.10	+	protein_coding	KNOWN	ZNF330	8	10	-0.221622
chr4	141240739	141278789	141259764	ENSG00000248747.1	-	lincRNA	KNOWN	RP11-586L23.1	1	3	-0.279327
chr4	141319450	141332618	141326034	ENSG00000248810.1	-	lincRNA	KNOWN	RP11-362F19.1	3	3	-0.368309
chr4	141405172	141407586	141406379	ENSG00000250189.2	+	processed_pseudogene	KNOWN	RP11-362F19.2	1	1	-0.302726
chr4	141430831	141431284	141431057	ENSG00000272632.1	+	lincRNA	KNOWN	RP11-362F19.3	1	1	-0.259174
chr4	141569931	141576077	141573004	ENSG00000250141.1	-	lincRNA	KNOWN	RP11-208N20.1	1	2	-0.614116
chr4	141636599	141733987	141685293	ENSG00000164136.16	+	protein_coding	KNOWN	IL15	8	10	-0.136030
chr4	142023160	142847432	142435296	ENSG00000109452.12	-	protein_coding	KNOWN	INPP4B	23	27	-0.326475
chr4	142286917	142287625	142287271	ENSG00000242134.2	-	processed_pseudogene	KNOWN	RPL5P13	1	1	-0.183115
chr4	142317238	142317546	142317392	ENSG00000250835.1	+	processed_pseudogene	KNOWN	LSM3P4	1	1	-0.406997
chr4	142514446	142518983	142516714	ENSG00000251248.1	+	lincRNA	KNOWN	RP11-223C24.2	1	2	-0.288280
chr4	142566019	142660950	142613484	ENSG00000249806.1	+	lincRNA	KNOWN	RP11-223C24.1	1	3	-0.372761
chr4	142933195	143184861	143059028	ENSG00000250326.1	-	antisense	KNOWN	RP11-284M14.1	2	3	-0.549423
chr4	143045086	143045878	143045482	ENSG00000251300.1	+	processed_pseudogene	KNOWN	RP11-54P19.1	1	1	-0.527528
chr4	143184917	143223830	143204373	ENSG00000170185.9	+	protein_coding	KNOWN	USP38	3	11	-0.529605
chr4	143286293	143329858	143308075	ENSG00000250969.1	+	lincRNA	KNOWN	RP11-364L4.3	1	2	-0.227650
chr4	143309466	143309566	143309516	ENSG00000200049.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.443727
chr4	143336762	143474568	143405665	ENSG00000109458.8	+	protein_coding	KNOWN	GAB1	14	11	-0.445810
chr4	143343460	143343535	143343497	ENSG00000265623.1	+	miRNA	KNOWN	MIR3139	1	1	-0.268410
chr4	143349275	143350117	143349696	ENSG00000228981.3	-	processed_pseudogene	KNOWN	RP11-364L4.1	1	1	-0.292861
chr4	143424753	143426013	143425383	ENSG00000243175.1	+	transcribed_processed_pseudogene	KNOWN	RPSAP36	2	1	-0.697790
chr4	143497412	143498126	143497769	ENSG00000250540.1	-	processed_pseudogene	KNOWN	RP11-58H15.3	1	2	-0.345588
chr4	143513463	143557486	143535474	ENSG00000153147.5	+	protein_coding	KNOWN	SMARCA5	3	24	-0.550164
chr4	143513472	143514635	143514053	ENSG00000245112.2	-	antisense	KNOWN	SMARCA5-AS1	1	2	-0.545438
chr4	143555082	143555583	143555332	ENSG00000248924.2	-	transcribed_processed_pseudogene	KNOWN	RP11-481K16.2	2	1	-0.497220
chr4	143559472	143649305	143604388	ENSG00000236296.7	+	transcribed_processed_pseudogene	KNOWN	GUSBP5	6	4	-0.396478
chr4	143577302	143700675	143638988	ENSG00000183090.5	-	protein_coding	KNOWN	FREM3	2	8	-0.442148
chr4	143700257	143865072	143782664	ENSG00000246448.2	+	antisense	KNOWN	RP13-578N3.3	1	7	-0.372387
chr4	143760399	143762093	143761246	ENSG00000250345.2	-	processed_pseudogene	KNOWN	RP11-780M14.1	1	2	-0.505910
chr4	143870867	143905563	143888215	ENSG00000197465.13	-	protein_coding	KNOWN	GYPE	3	4	-0.394095
chr4	143911514	143912053	143911783	ENSG00000249741.2	-	processed_pseudogene	KNOWN	RP11-673E1.3	1	1	-0.412683
chr4	143912331	143982454	143947392	ENSG00000251600.5	+	lincRNA	KNOWN	RP11-673E1.1	3	7	-0.479946
chr4	143953635	144126359	144039997	ENSG00000248828.1	+	antisense	KNOWN	RP11-673E1.4	1	5	-0.526996
chr4	143996104	144019345	144007724	ENSG00000250361.6	-	protein_coding	KNOWN	GYPB	15	7	-0.340476
chr4	144109303	144140751	144125027	ENSG00000170180.19	-	protein_coding	KNOWN	GYPA	12	8	-0.884021
chr4	144505900	144509001	144507450	ENSG00000261129.1	+	lincRNA	KNOWN	RP11-361D14.2	1	1	-0.793144
chr4	144572238	144572983	144572610	ENSG00000250504.2	+	processed_pseudogene	KNOWN	KRT18P51	1	1	-0.438523
chr4	144642922	144661357	144652139	ENSG00000248890.1	-	antisense	KNOWN	HHIP-AS1	3	4	-0.524457
chr4	144646021	144745271	144695646	ENSG00000164161.9	+	protein_coding	KNOWN	HHIP	8	13	-0.558345
chr4	144739762	144739941	144739851	ENSG00000273621.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.899497
chr4	144845625	144847344	144846484	ENSG00000249193.1	+	processed_pseudogene	KNOWN	HSPD1P5	1	1	-0.827226
chr4	144851572	144874787	144863179	ENSG00000250406.1	+	lincRNA	KNOWN	RP13-539F13.3	1	2	-0.704866
chr4	144920713	144921164	144920938	ENSG00000251452.2	-	processed_pseudogene	KNOWN	RP13-539F13.2	1	1	-0.916372
chr4	144967112	145098541	145032826	ENSG00000164162.12	-	protein_coding	KNOWN	ANAPC10	17	7	-0.511562
chr4	145035132	145035436	145035284	ENSG00000222594.1	+	misc_RNA	KNOWN	RN7SKP235	1	1	-0.234509
chr4	145097932	145129179	145113555	ENSG00000164163.10	+	protein_coding	KNOWN	ABCE1	10	19	-0.254643
chr4	145110838	145180161	145145499	ENSG00000164164.15	-	protein_coding	KNOWN	OTUD4	10	22	-0.349176
chr4	145149537	145149649	145149593	ENSG00000238713.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.587675
chr4	145269810	145270558	145270184	ENSG00000240992.1	-	processed_pseudogene	KNOWN	RPS23P4	1	2	-0.402002
chr4	145335263	145340421	145337842	ENSG00000272727.1	-	lincRNA	KNOWN	RP11-142A22.4	1	4	-0.252538
chr4	145375543	145376253	145375898	ENSG00000251333.3	+	processed_pseudogene	KNOWN	RTN3P1	1	1	-0.355467
chr4	145376909	145377957	145377433	ENSG00000278943.1	+	TEC	KNOWN	RP11-142A22.3	1	1	-0.355467
chr4	145456005	145456844	145456424	ENSG00000248745.2	+	processed_pseudogene	KNOWN	NMNAT1P4	1	1	-0.456071
chr4	145481194	145558079	145519636	ENSG00000170365.9	+	protein_coding	KNOWN	SMAD1	16	7	-0.326676
chr4	145497073	145502971	145500022	ENSG00000250582.1	-	antisense	KNOWN	SMAD1-AS2	1	2	-0.405023
chr4	145514615	145517118	145515866	ENSG00000250902.1	-	antisense	KNOWN	SMAD1-AS1	1	2	-0.172980
chr4	145599109	145600552	145599830	ENSG00000248686.1	+	lincRNA	KNOWN	RP11-557J10.5	1	2	-0.341358
chr4	145618263	145660035	145639149	ENSG00000151611.13	+	protein_coding	KNOWN	MMAA	5	7	-0.153385
chr4	145624159	145626035	145625097	ENSG00000249245.2	-	processed_pseudogene	KNOWN	RP11-557J10.3	1	1	0.013040
chr4	145642336	145650624	145646480	ENSG00000248356.1	-	antisense	KNOWN	RP11-557J10.4	1	2	-0.120561
chr4	145680204	145771032	145725618	ENSG00000237136.6	+	protein_coding	KNOWN	C4orf51	4	6	-0.106948
chr4	145757627	145938635	145848131	ENSG00000151612.15	-	protein_coding	KNOWN	ZNF827	10	15	-0.120070
chr4	145830456	145832980	145831718	ENSG00000279481.1	-	TEC	KNOWN	RP11-181K12.1	1	1	-0.236790
chr4	145833118	145839580	145836349	ENSG00000251687.1	+	antisense	KNOWN	RP11-181K12.2	1	3	-0.236790
chr4	145958128	145958240	145958184	ENSG00000201314.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.275217
chr4	146052604	146056762	146054683	ENSG00000260303.1	-	lincRNA	KNOWN	RP11-203B7.2	1	1	-0.427617
chr4	146077846	146108157	146093001	ENSG00000251024.1	-	lincRNA	KNOWN	RP11-203B7.1	1	3	-0.524756
chr4	146109455	146121913	146115684	ENSG00000248809.5	-	lincRNA	KNOWN	LINC01095	5	6	-0.297833
chr4	146122204	146122284	146122244	ENSG00000216055.1	-	miRNA	NOVEL	AC097372.1	1	1	-0.279977
chr4	146175685	146200000	146187842	ENSG00000164167.9	+	protein_coding	KNOWN	LSM6	7	5	-0.205786
chr4	146180851	146181316	146181083	ENSG00000279845.1	+	TEC	KNOWN	RP11-6L6.4	1	1	-0.075850
chr4	146224557	146229056	146226806	ENSG00000250673.1	+	lincRNA	KNOWN	RP11-6L6.2	1	3	-0.144769
chr4	146231892	146232267	146232079	ENSG00000280250.1	+	TEC	KNOWN	RP11-6L6.6	1	1	-0.354854
chr4	146241806	146243669	146242737	ENSG00000251010.1	+	antisense	KNOWN	RP11-6L6.7	1	2	-0.354854
chr4	146253975	146521964	146387969	ENSG00000120519.14	-	protein_coding	KNOWN	SLC10A7	9	13	-0.401812
chr4	146408583	146408688	146408635	ENSG00000278438.1	+	miRNA	KNOWN	MIR7849	1	1	-0.557822
chr4	146580048	146580210	146580129	ENSG00000207182.1	+	snRNA	KNOWN	RNU1-44P	1	1	-0.379513
chr4	146638893	146642474	146640683	ENSG00000151615.3	+	protein_coding	KNOWN	POU4F2	1	2	-0.604332
chr4	146639261	146639343	146639302	ENSG00000264323.1	+	miRNA	NOVEL	AC093887.1	1	1	-0.604332
chr4	146706638	146945882	146826260	ENSG00000137473.17	-	protein_coding	KNOWN	TTC29	9	14	-0.698576
chr4	146934001	146945471	146939736	ENSG00000248764.1	+	antisense	KNOWN	RP11-292D4.2	1	3	-0.678526
chr4	146957438	146975457	146966447	ENSG00000248346.1	+	lincRNA	KNOWN	RP11-292D4.1	2	4	-0.454372
chr4	147005492	147009145	147007318	ENSG00000260090.1	+	lincRNA	KNOWN	RP11-292D4.3	1	1	-0.183643
chr4	147025914	147030072	147027993	ENSG00000279376.1	+	TEC	KNOWN	RP11-292D4.4	1	1	-0.690789
chr4	147344629	147344717	147344673	ENSG00000221369.1	-	miRNA	KNOWN	MIR548G	1	1	-0.303493
chr4	147425974	147426351	147426162	ENSG00000241281.1	-	processed_pseudogene	KNOWN	RP11-364M6.1	1	1	-0.938705
chr4	147458724	147459321	147459022	ENSG00000249004.1	-	processed_pseudogene	KNOWN	PRMT5P1	1	1	-0.363460
chr4	147480917	147544954	147512935	ENSG00000151617.15	+	protein_coding	KNOWN	EDNRA	7	8	-0.277493
chr4	147487971	147496062	147492016	ENSG00000280219.1	+	TEC	KNOWN	RP11-752L20.3	1	1	-0.288268
chr4	147506091	147506765	147506428	ENSG00000251254.1	+	processed_pseudogene	KNOWN	GTF2F2P1	1	1	-0.328012
chr4	147567606	147594587	147581096	ENSG00000251688.1	+	lincRNA	KNOWN	RP11-752L20.5	1	7	-0.213259
chr4	147609552	147617245	147613398	ENSG00000251298.1	-	antisense	KNOWN	RP11-425A23.1	1	2	-0.079466
chr4	147617383	147672044	147644713	ENSG00000164168.7	+	protein_coding	KNOWN	TMEM184C	4	10	-0.149905
chr4	147637785	147684230	147661007	ENSG00000164169.12	-	protein_coding	KNOWN	PRMT9	4	12	-0.152790
chr4	147732063	148072780	147902421	ENSG00000071205.11	+	protein_coding	KNOWN	ARHGAP10	7	23	-0.103639
chr4	147745303	147745417	147745360	ENSG00000252951.1	-	rRNA	KNOWN	RNA5SP165	1	1	0.210173
chr4	147782595	147782668	147782631	ENSG00000264274.1	+	miRNA	KNOWN	MIR4799	1	1	-0.057386
chr4	147808926	147809209	147809067	ENSG00000240014.3	+	misc_RNA	KNOWN	RN7SL254P	1	1	-0.213353
chr4	147916529	147917386	147916957	ENSG00000270387.1	-	processed_pseudogene	KNOWN	RP11-315D13.1	1	1	-0.305344
chr4	148078762	148444698	148261730	ENSG00000151623.14	-	protein_coding	KNOWN	NR3C2	9	9	-0.554714
chr4	148146471	148208880	148177675	ENSG00000250354.1	+	antisense	KNOWN	RP11-76G10.1	1	3	-0.485911
chr4	148526493	148527139	148526816	ENSG00000251418.2	-	processed_pseudogene	KNOWN	RP11-655B23.1	1	1	-0.248499
chr4	148557947	148558048	148557997	ENSG00000201846.1	+	rRNA	KNOWN	RNA5SP166	1	1	-0.924496
chr4	148693032	148694323	148693677	ENSG00000250357.1	+	lincRNA	KNOWN	RP11-503L19.1	1	2	-0.667000
chr4	148703526	148703832	148703679	ENSG00000225176.2	-	processed_pseudogene	KNOWN	ATP5LP4	1	1	-0.667000
chr4	148819351	148819956	148819653	ENSG00000279016.1	-	TEC	KNOWN	RP11-360A10.1	1	1	-0.824680
chr4	148940941	148942378	148941659	ENSG00000249317.1	-	processed_transcript	KNOWN	CTB-191D16.1	2	3	-0.355467
chr4	148991572	148991633	148991602	ENSG00000239168.1	-	snRNA	KNOWN	RNU7-197P	1	1	-0.545438
chr4	149027445	149062522	149044983	ENSG00000249752.1	-	lincRNA	KNOWN	RP11-563M4.1	1	4	-0.371671
chr4	149147802	149149780	149148791	ENSG00000250252.1	-	lincRNA	KNOWN	RP11-342A1.1	1	2	-0.432923
chr4	149154295	149278123	149216209	ENSG00000248210.1	+	lincRNA	KNOWN	RP11-24I21.1	1	13	-0.572226
chr4	149295345	149295480	149295412	ENSG00000281875.1	-	miRNA	NOVEL	AC097465.1	1	1	-0.832281
chr4	149352017	149896233	149624125	ENSG00000234828.7	-	lincRNA	KNOWN	RP11-526A4.1	5	17	-0.532673
chr4	149666057	149711149	149688603	ENSG00000250905.1	+	lincRNA	KNOWN	RP11-707F2.1	1	3	-0.336608
chr4	149789952	149790303	149790127	ENSG00000251482.1	+	processed_pseudogene	KNOWN	AKIRIN2P1	1	1	-0.543524
chr4	149907560	149907675	149907617	ENSG00000202331.1	+	rRNA	KNOWN	RNA5SP167	1	1	-0.210278
chr4	149934376	149934483	149934429	ENSG00000207121.1	+	snRNA	KNOWN	RNU6-1230P	1	1	-0.325928
chr4	149956208	149958572	149957390	ENSG00000250704.1	+	lincRNA	KNOWN	RP11-423J7.1	1	2	-0.658030
chr4	150078274	150257457	150167865	ENSG00000170390.15	+	protein_coding	KNOWN	DCLK2	7	18	0.074804
chr4	150209706	150209768	150209737	ENSG00000238721.1	+	snRNA	KNOWN	RNU7-194P	1	1	0.050172
chr4	150264531	151015727	150640129	ENSG00000198589.10	-	protein_coding	KNOWN	LRBA	13	58	-0.399980
chr4	150422645	150423642	150423143	ENSG00000248521.1	-	processed_pseudogene	KNOWN	RP11-174F8.1	1	1	-0.700015
chr4	150579089	150581545	150580317	ENSG00000249690.1	+	antisense	KNOWN	RP11-1336O20.2	1	2	-0.580714
chr4	150581922	150584693	150583307	ENSG00000181541.5	+	protein_coding	KNOWN	MAB21L2	1	1	-0.580714
chr4	150639756	150639866	150639811	ENSG00000221235.1	-	miRNA	NOVEL	AC110813.1	1	1	-0.549215
chr4	150720981	150721478	150721229	ENSG00000183432.6	+	processed_pseudogene	KNOWN	ZBTB8OSP1	1	1	-0.675347
chr4	150970671	150970782	150970726	ENSG00000252451.1	-	rRNA	KNOWN	RNA5SP168	1	1	-0.388440
chr4	151027090	151027617	151027353	ENSG00000235606.3	+	processed_pseudogene	KNOWN	AK4P6	1	1	0.112030
chr4	151099573	151104652	151102112	ENSG00000145425.9	+	protein_coding	KNOWN	RPS3A	14	6	-0.006310
chr4	151102057	151102128	151102092	ENSG00000201264.1	+	snoRNA	NOVEL	SNORD73	1	1	-0.006310
chr4	151102751	151325632	151214191	ENSG00000109686.17	-	protein_coding	KNOWN	SH3D19	13	21	0.039755
chr4	151103827	151103891	151103859	ENSG00000208797.1	+	snoRNA	KNOWN	SNORD73A	1	1	-0.006310
chr4	151139991	151141103	151140547	ENSG00000270681.1	+	antisense	KNOWN	RP11-372K14.2	1	1	0.065192
chr4	151259503	151262849	151261176	ENSG00000249012.2	+	unprocessed_pseudogene	KNOWN	RP11-731D1.1	1	5	0.462555
chr4	151277171	151291453	151284312	ENSG00000189099.11	+	protein_coding	KNOWN	PRSS48	2	5	-0.084294
chr4	151279030	151279192	151279111	ENSG00000250350.1	-	unprocessed_pseudogene	KNOWN	RP11-731D1.3	1	1	-0.074980
chr4	151300518	151300613	151300565	ENSG00000252544.1	+	snRNA	KNOWN	RNU6-1282P	1	1	-0.166470
chr4	151333775	151353224	151343499	ENSG00000270265.1	-	lincRNA	KNOWN	RP11-731D1.4	1	2	0.020047
chr4	151407551	151408835	151408193	ENSG00000251611.1	-	lincRNA	KNOWN	RP11-610P16.1	1	2	-0.481916
chr4	151409216	151663632	151536424	ENSG00000164142.15	+	protein_coding	KNOWN	FAM160A1	8	14	-0.170815
chr4	151565710	151565810	151565760	ENSG00000278056.1	-	miRNA	NOVEL	AC097455.1	1	1	0.017991
chr4	151576766	151576916	151576841	ENSG00000253019.1	+	misc_RNA	KNOWN	RN7SKP35	1	1	-0.231953
chr4	151667224	151670502	151668863	ENSG00000251603.1	+	antisense	KNOWN	RP11-164P12.4	1	2	-0.005690
chr4	151669786	151670503	151670144	ENSG00000278978.1	+	TEC	KNOWN	RP11-164P12.5	1	1	0.191717
chr4	151670504	151761023	151715763	ENSG00000059691.11	-	protein_coding	KNOWN	GATB	14	13	0.077332
chr4	151674483	151677893	151676188	ENSG00000251455.1	+	antisense	KNOWN	RP11-164P12.3	1	3	0.298443
chr4	151799500	151801348	151800424	ENSG00000249184.1	+	lincRNA	KNOWN	RP11-424M21.1	1	3	-0.032815
chr4	151887543	151891263	151889403	ENSG00000249708.1	-	lincRNA	KNOWN	RP11-503L23.1	1	3	0.178198
chr4	151904932	151928648	151916790	ENSG00000249818.1	-	lincRNA	KNOWN	RP11-73G16.3	1	3	-0.134499
chr4	151919468	151943933	151931700	ENSG00000248991.1	+	lincRNA	KNOWN	RP11-73G16.2	1	4	-0.099172
chr4	151955991	151969381	151962686	ENSG00000251249.1	+	processed_transcript	KNOWN	RP11-73G16.1	3	2	0.041111
chr4	151971497	151971613	151971555	ENSG00000253077.1	-	rRNA	KNOWN	RNA5SP169	1	1	-0.144076
chr4	152100754	152104720	152102737	ENSG00000245954.6	+	lincRNA	KNOWN	RP11-18H21.1	3	3	0.155768
chr4	152146385	152178573	152162479	ENSG00000250706.1	-	lincRNA	KNOWN	RP11-18H21.2	1	5	0.208026
chr4	152207421	152225870	152216645	ENSG00000251377.1	-	lincRNA	KNOWN	RP11-18H21.3	2	3	-0.063060
chr4	152228468	152228534	152228501	ENSG00000266244.1	+	miRNA	NOVEL	AC079340.1	1	1	-0.080845
chr4	152264150	152264445	152264297	ENSG00000244544.2	-	misc_RNA	KNOWN	RN7SL446P	1	1	0.204886
chr4	152308283	152309983	152309133	ENSG00000270302.1	-	lincRNA	KNOWN	RP11-461L13.4	1	2	-0.123737
chr4	152317902	152318364	152318133	ENSG00000270883.1	-	lincRNA	KNOWN	RP11-461L13.5	1	1	-0.349518
chr4	152320544	152321044	152320794	ENSG00000270750.1	-	lincRNA	KNOWN	RP11-461L13.3	1	1	-0.349518
chr4	152321259	152536101	152428680	ENSG00000109670.13	-	protein_coding	KNOWN	FBXW7	13	13	-0.386893
chr4	152337655	152338098	152337876	ENSG00000270751.1	+	antisense	KNOWN	DEAR	1	2	-0.339959
chr4	152489327	152489416	152489371	ENSG00000264678.1	-	miRNA	KNOWN	MIR3140	1	1	-0.477117
chr4	152536264	152539263	152537763	ENSG00000268471.4	+	lincRNA	KNOWN	DKFZP434I0714	1	1	-0.165989
chr4	152536428	152536516	152536472	ENSG00000277685.1	+	miRNA	KNOWN	MIR4453	1	1	-0.165989
chr4	152551277	152552364	152551820	ENSG00000243417.1	-	processed_pseudogene	KNOWN	RP11-555K12.1	1	2	-0.449249
chr4	152613875	152614333	152614104	ENSG00000240669.1	-	processed_pseudogene	KNOWN	RP11-555K12.2	1	1	0.453547
chr4	152618632	152680165	152649398	ENSG00000170006.11	-	protein_coding	KNOWN	TMEM154	4	7	-0.089799
chr4	152666368	152670107	152668237	ENSG00000248571.1	+	antisense	KNOWN	RP11-768B22.2	1	2	-0.288891
chr4	152687727	152918463	152803095	ENSG00000164144.14	+	protein_coding	KNOWN	ARFIP1	12	9	-0.214382
chr4	152769354	152779764	152774559	ENSG00000169989.2	-	protein_coding	KNOWN	TIGD4	1	2	-0.048491
chr4	152796063	152796831	152796447	ENSG00000250980.1	-	processed_pseudogene	KNOWN	RP11-529H22.1	1	1	-0.134284
chr4	152900966	152901079	152901022	ENSG00000252375.1	+	miRNA	NOVEL	AC099339.1	1	1	-0.271892
chr4	152927446	152928207	152927826	ENSG00000231841.1	+	processed_pseudogene	KNOWN	RP11-206F17.2	1	1	-0.255932
chr4	152936352	152979696	152958024	ENSG00000137460.8	+	protein_coding	KNOWN	FHDC1	2	12	-0.103229
chr4	153034211	153091165	153062688	ENSG00000249022.1	+	lincRNA	KNOWN	RP11-285C1.2	1	5	-0.257869
chr4	153152342	153339320	153245831	ENSG00000109654.14	+	protein_coding	KNOWN	TRIM2	12	12	0.029661
chr4	153265662	153265755	153265708	ENSG00000252030.1	-	snRNA	KNOWN	RNU6-1196P	1	1	0.193687
chr4	153266909	153267010	153266959	ENSG00000201786.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.193687
chr4	153307792	153308717	153308254	ENSG00000213406.3	-	processed_pseudogene	KNOWN	ANXA2P1	1	1	0.034659
chr4	153344649	153415118	153379883	ENSG00000121211.7	+	protein_coding	KNOWN	MND1	6	10	-0.344485
chr4	153360533	153360654	153360593	ENSG00000263596.1	+	miRNA	NOVEL	AC013477.1	1	1	-0.320269
chr4	153381729	153382015	153381872	ENSG00000243883.3	-	misc_RNA	KNOWN	RN7SL419P	1	1	-0.628854
chr4	153466346	153636711	153551528	ENSG00000121210.15	+	protein_coding	KNOWN	KIAA0922	8	35	-0.129457
chr4	153640168	153681180	153660674	ENSG00000250771.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-153M7.3	2	3	-0.313770
chr4	153658572	153659653	153659112	ENSG00000248208.1	+	processed_pseudogene	KNOWN	RP11-153M7.1	1	1	-0.366547
chr4	153701500	153705699	153703599	ENSG00000137462.6	+	protein_coding	KNOWN	TLR2	1	1	-0.581198
chr4	153710125	153760235	153735180	ENSG00000145428.14	-	protein_coding	KNOWN	RNF175	9	9	-0.560855
chr4	153720327	153727722	153724024	ENSG00000249309.1	+	antisense	KNOWN	RP11-153M7.5	1	5	-0.699143
chr4	153741852	153741939	153741895	ENSG00000221657.2	-	miRNA	NOVEL	AC020703.1	1	1	-0.600499
chr4	153780592	153789120	153784856	ENSG00000145423.4	-	protein_coding	KNOWN	SFRP2	1	3	-0.958634
chr4	153873367	153873451	153873409	ENSG00000252181.1	-	miRNA	NOVEL	AC020703.2	1	1	-0.204783
chr4	154142122	154298819	154220470	ENSG00000280241.3	+	antisense	KNOWN	RP11-290O12.2	3	5	-0.480851
chr4	154218909	154218993	154218951	ENSG00000264137.1	+	miRNA	NOVEL	AC079298.1	1	1	-0.442666
chr4	154232037	154491716	154361876	ENSG00000197410.12	-	protein_coding	KNOWN	DCHS2	8	25	-0.599263
chr4	154235980	154237598	154236789	ENSG00000278981.1	+	antisense	KNOWN	RP11-9N12.2	1	1	-0.768151
chr4	154261735	154262193	154261964	ENSG00000280005.1	+	antisense	KNOWN	RP11-9N12.3	1	1	-0.472961
chr4	154373886	154374347	154374116	ENSG00000249200.1	+	processed_pseudogene	KNOWN	RP11-290O12.1	1	1	-0.243611
chr4	154523487	154524807	154524147	ENSG00000250609.1	+	processed_pseudogene	KNOWN	RP11-158C21.2	1	2	-0.259772
chr4	154535006	154550435	154542720	ENSG00000171566.11	-	protein_coding	KNOWN	PLRG1	13	15	-0.457433
chr4	154543933	154544037	154543985	ENSG00000200350.1	-	snRNA	KNOWN	RNU6-1285P	1	1	-0.465340
chr4	154555208	154555985	154555596	ENSG00000248611.1	+	processed_pseudogene	KNOWN	RP11-158C21.3	1	1	-0.185542
chr4	154562956	154571086	154567021	ENSG00000171564.11	+	protein_coding	KNOWN	FGB	7	8	-0.283339
chr4	154583126	154590766	154586946	ENSG00000171560.14	-	protein_coding	KNOWN	FGA	3	6	-0.864131
chr4	154604134	154612967	154608550	ENSG00000171557.16	-	protein_coding	KNOWN	FGG	12	10	-0.400800
chr4	154626945	154753118	154690031	ENSG00000121207.11	+	protein_coding	KNOWN	LRAT	8	6	-0.627646
chr4	154724586	154724880	154724733	ENSG00000249074.1	+	processed_pseudogene	KNOWN	RP11-21G20.1	1	1	-0.708975
chr4	154754756	154781873	154768314	ENSG00000249041.1	-	antisense	KNOWN	RP11-21G20.3	1	4	-0.496882
chr4	154770568	154770916	154770742	ENSG00000249692.1	+	processed_pseudogene	KNOWN	RP11-21G20.4	1	1	-0.590818
chr4	154781213	154828813	154805013	ENSG00000151962.7	+	protein_coding	KNOWN	RBM46	4	6	-0.599297
chr4	154787118	154787278	154787198	ENSG00000222582.1	+	snRNA	KNOWN	RNU2-66P	1	1	-0.590818
chr4	154790291	154790484	154790387	ENSG00000252604.1	+	snRNA	KNOWN	RNU2-44P	1	1	-0.440229
chr4	155173716	155381694	155277705	ENSG00000250910.7	+	antisense	KNOWN	AC097467.2	38	9	-0.701259
chr4	155206529	155209027	155207778	ENSG00000250538.5	-	antisense	KNOWN	RP11-92A5.2	2	3	-0.882322
chr4	155208629	155217078	155212853	ENSG00000185149.5	+	protein_coding	KNOWN	NPY2R	2	2	-0.903843
chr4	155286162	155287136	155286649	ENSG00000249924.2	-	lincRNA	KNOWN	RP11-27G13.1	1	2	-0.747072
chr4	155342658	155376970	155359814	ENSG00000164114.18	-	protein_coding	KNOWN	MAP9	8	14	-0.809245
chr4	155381042	155381239	155381140	ENSG00000250205.1	-	processed_pseudogene	KNOWN	YWHAEP4	1	1	-0.285482
chr4	155383107	155384102	155383604	ENSG00000250398.1	-	processed_pseudogene	KNOWN	RP11-27G13.4	1	2	-0.285482
chr4	155385352	155385492	155385422	ENSG00000271606.1	+	unprocessed_pseudogene	KNOWN	RP11-27G13.5	1	1	-0.285482
chr4	155451617	155452405	155452011	ENSG00000249247.1	-	unprocessed_pseudogene	KNOWN	MTCYBP17	1	1	-0.766964
chr4	155452526	155453044	155452785	ENSG00000249770.1	+	unprocessed_pseudogene	KNOWN	MTND6P17	1	1	-0.766964
chr4	155453049	155454803	155453926	ENSG00000248748.1	-	unprocessed_pseudogene	KNOWN	MTND5P9	1	1	-0.766964
chr4	155455050	155456411	155455730	ENSG00000248548.1	-	unprocessed_pseudogene	KNOWN	MTND4P8	1	1	-0.766964
chr4	155456638	155456981	155456809	ENSG00000249127.1	-	unprocessed_pseudogene	KNOWN	MTND3P3	1	2	-0.766964
chr4	155457180	155457960	155457570	ENSG00000249698.1	-	unprocessed_pseudogene	KNOWN	MTCO3P9	1	1	-0.766964
chr4	155457961	155458640	155458300	ENSG00000248420.1	-	unprocessed_pseudogene	KNOWN	MTATP6P9	1	1	-0.766964
chr4	155458870	155459563	155459216	ENSG00000249386.1	-	unprocessed_pseudogene	KNOWN	MTCO2P9	1	1	-0.766964
chr4	155459704	155461237	155460470	ENSG00000251223.1	-	unprocessed_pseudogene	KNOWN	MTCO1P9	1	1	-0.766964
chr4	155461633	155462663	155462148	ENSG00000248907.1	-	unprocessed_pseudogene	KNOWN	MTND2P33	1	1	-0.766964
chr4	155462873	155463823	155463348	ENSG00000251407.1	-	unprocessed_pseudogene	KNOWN	MTND1P22	1	1	-0.766964
chr4	155515727	155517459	155516593	ENSG00000251244.1	+	lincRNA	KNOWN	RP13-487K5.1	1	2	-0.833240
chr4	155666711	155732349	155699530	ENSG00000164116.16	+	protein_coding	KNOWN	GUCY1A3	13	11	-0.779288
chr4	155734448	155737062	155735755	ENSG00000260244.1	+	sense_overlapping	KNOWN	RP11-588K22.2	1	1	-0.465490
chr4	155758992	155807591	155783291	ENSG00000061918.12	+	protein_coding	KNOWN	GUCY1B3	7	15	-0.453070
chr4	155829729	155866273	155848001	ENSG00000256394.2	-	protein_coding	KNOWN	ASIC5	1	10	-0.592341
chr4	155854738	155920406	155887572	ENSG00000151790.8	+	protein_coding	KNOWN	TDO2	8	12	-0.555650
chr4	155924118	155953917	155939017	ENSG00000256043.2	-	protein_coding	KNOWN	CTSO	1	8	-0.509428
chr4	156006478	156006988	156006733	ENSG00000249013.1	+	processed_pseudogene	KNOWN	FTH1P21	1	1	-0.372676
chr4	156296561	156296646	156296603	ENSG00000221189.1	-	miRNA	NOVEL	AC108211.1	1	1	-0.518833
chr4	156585979	156590039	156588009	ENSG00000251511.1	+	lincRNA	KNOWN	RP11-171N4.1	1	2	-0.262880
chr4	156634494	156642454	156638474	ENSG00000251283.1	-	lincRNA	KNOWN	RP11-171N4.2	2	3	-0.412683
chr4	156642580	156643569	156643074	ENSG00000249479.1	+	antisense	KNOWN	RP11-171N4.3	1	2	-0.412683
chr4	156686664	156692636	156689650	ENSG00000248912.1	+	lincRNA	KNOWN	RP11-171N4.4	1	2	-0.461493
chr4	156760454	156971394	156865924	ENSG00000145431.10	-	protein_coding	KNOWN	PDGFC	9	8	-0.283455
chr4	156841359	156842236	156841797	ENSG00000248629.1	+	antisense	KNOWN	RP11-154F14.2	1	2	-0.543244
chr4	156876435	156876820	156876627	ENSG00000280284.1	+	TEC	KNOWN	RP11-154F14.3	1	1	-0.025660
chr4	156886645	156886862	156886753	ENSG00000278880.1	+	TEC	KNOWN	RP11-612J15.1	1	1	-0.025660
chr4	156972631	156972956	156972793	ENSG00000250622.1	+	processed_pseudogene	KNOWN	RP11-612J15.3	1	1	-0.211915
chr4	156986372	156986693	156986532	ENSG00000252350.1	-	ribozyme	KNOWN	RPPH1-3P	1	1	-0.211915
chr4	157064557	157064663	157064610	ENSG00000252524.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.768402
chr4	157076057	157172090	157124073	ENSG00000109738.10	+	protein_coding	KNOWN	GLRB	7	10	-0.486136
chr4	157201562	157201668	157201615	ENSG00000199859.1	-	snRNA	KNOWN	RNU6-582P	1	1	-0.476292
chr4	157204182	157366075	157285128	ENSG00000120251.18	+	protein_coding	KNOWN	GRIA2	14	17	-0.665296
chr4	157204462	157204855	157204658	ENSG00000249819.1	-	processed_pseudogene	KNOWN	RP11-392C20.1	1	1	-0.476292
chr4	157360144	157360198	157360171	ENSG00000263738.2	+	miRNA	NOVEL	AC079233.1	1	1	-0.964911
chr4	157572490	157576154	157574322	ENSG00000234111.6	+	lincRNA	KNOWN	RP11-364P22.1	3	3	-0.432670
chr4	157588148	157588235	157588191	ENSG00000221618.1	-	miRNA	NOVEL	AC093817.1	1	1	-0.432670
chr4	157637687	157667044	157652365	ENSG00000249275.1	+	lincRNA	KNOWN	RP11-364P22.2	1	2	-0.790822
chr4	157768013	157768113	157768063	ENSG00000200521.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.754299
chr4	157815010	157815480	157815245	ENSG00000249627.1	+	processed_pseudogene	KNOWN	RP11-312A15.1	1	1	-0.606181
chr4	157818101	157818572	157818336	ENSG00000279703.1	-	TEC	KNOWN	RP11-364P22.3	1	1	-0.606181
chr4	157945817	157946642	157946229	ENSG00000279994.1	-	TEC	KNOWN	RP11-312A15.2	1	1	-0.688891
chr4	157968412	157969615	157969013	ENSG00000250475.1	-	unprocessed_pseudogene	KNOWN	RP11-312A15.3	1	2	-0.503618
chr4	158109500	158110153	158109826	ENSG00000279139.1	-	TEC	KNOWN	RP11-597D13.1	1	1	-0.044928
chr4	158111361	158111931	158111646	ENSG00000280140.1	-	TEC	KNOWN	RP11-597D13.2	1	1	-0.362574
chr4	158124474	158173318	158148896	ENSG00000164125.15	-	protein_coding	KNOWN	FAM198B	9	6	-0.317812
chr4	158170752	158202877	158186814	ENSG00000248429.5	+	antisense	KNOWN	RP11-597D13.9	5	6	-0.337826
chr4	158182825	158183393	158183109	ENSG00000251073.1	+	processed_pseudogene	KNOWN	NUDT19P5	1	1	-0.172711
chr4	158199105	158200442	158199773	ENSG00000250604.1	-	antisense	KNOWN	RP11-597D13.8	1	2	-0.584601
chr4	158201604	158255411	158228507	ENSG00000164124.10	+	protein_coding	KNOWN	TMEM144	17	13	-0.417751
chr4	158270378	158278676	158274527	ENSG00000251429.1	+	transcribed_processed_pseudogene	KNOWN	RP11-597D13.7	3	3	-0.473207
chr4	158315311	158653372	158484341	ENSG00000171509.15	+	protein_coding	KNOWN	RXFP1	11	20	-0.496907
chr4	158395394	158395534	158395464	ENSG00000199634.1	+	snRNA	KNOWN	RNU4-79P	1	1	-0.879153
chr4	158469586	158470702	158470144	ENSG00000248387.1	+	processed_pseudogene	KNOWN	RP11-781M16.1	1	2	-0.429414
chr4	158490766	158509908	158500337	ENSG00000249901.1	-	antisense	KNOWN	RP11-781M16.2	1	3	-0.214435
chr4	158666679	158672255	158669467	ENSG00000205208.4	-	protein_coding	KNOWN	C4orf46	3	2	-0.246612
chr4	158672125	158709623	158690874	ENSG00000171503.11	+	protein_coding	KNOWN	ETFDH	8	13	-0.211180
chr4	158700691	158700909	158700800	ENSG00000271817.2	+	snoRNA	NOVEL	U3	1	1	-0.411775
chr4	158709134	158723396	158716265	ENSG00000171497.4	-	protein_coding	KNOWN	PPID	3	10	-0.151579
chr4	158769138	158908049	158838593	ENSG00000052795.12	+	protein_coding	KNOWN	FNIP2	6	17	-0.046483
chr4	158794590	158794696	158794643	ENSG00000206703.1	-	snRNA	KNOWN	RNU6-128P	1	1	-0.150466
chr4	158893134	159038760	158965947	ENSG00000164123.6	-	protein_coding	KNOWN	C4orf45	3	5	-0.168082
chr4	158909373	158909450	158909411	ENSG00000274535.1	-	snoRNA	NOVEL	SNORD39	1	1	-0.059016
chr4	159000146	159000290	159000218	ENSG00000221314.1	-	miRNA	NOVEL	AC093700.1	1	1	-0.296279
chr4	159007119	159007835	159007477	ENSG00000248988.1	+	processed_pseudogene	KNOWN	RP11-815N9.2	1	1	-0.296279
chr4	159026139	159026527	159026333	ENSG00000249367.1	+	processed_pseudogene	KNOWN	FABP5P12	1	1	-0.103139
chr4	159064297	159064398	159064347	ENSG00000206978.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.573825
chr4	159104178	159360169	159232173	ENSG00000109756.8	+	protein_coding	KNOWN	RAPGEF2	13	24	-0.219803
chr4	159128802	159128894	159128848	ENSG00000264105.1	-	miRNA	KNOWN	MIR3688-2	1	1	-0.247858
chr4	159375099	159375322	159375210	ENSG00000248552.1	-	processed_pseudogene	KNOWN	RP11-138A23.1	1	1	-0.080993
chr4	159398533	159401246	159399889	ENSG00000250180.1	+	lincRNA	KNOWN	RP11-138A23.2	1	2	-0.070859
chr4	159666503	159777784	159722143	ENSG00000250488.1	-	lincRNA	KNOWN	RP11-6C14.1	1	3	-0.551625
chr4	159722801	159722885	159722843	ENSG00000274246.1	-	miRNA	NOVEL	AC097466.1	1	1	-0.497376
chr4	160521829	160522311	160522070	ENSG00000250997.1	-	processed_pseudogene	KNOWN	RP11-502M1.1	1	1	-0.829534
chr4	160539254	160586817	160563035	ENSG00000249425.1	+	lincRNA	KNOWN	RP11-502M1.2	1	5	-0.673135
chr4	160818422	160818869	160818645	ENSG00000242635.2	+	processed_pseudogene	KNOWN	RPS14P7	1	1	-0.733510
chr4	161003877	161003958	161003917	ENSG00000221362.1	-	miRNA	NOVEL	AC106860.1	1	1	-1.092433
chr4	161378953	161388417	161383685	ENSG00000249568.1	+	antisense	KNOWN	RP11-234O6.2	1	2	-0.953332
chr4	161383897	162164035	161773966	ENSG00000168843.13	-	protein_coding	KNOWN	FSTL5	5	16	-0.836183
chr4	162022733	162047567	162035150	ENSG00000249419.1	+	antisense	KNOWN	RP11-497K21.1	1	6	-0.965316
chr4	162322188	162323907	162323047	ENSG00000251253.1	+	processed_pseudogene	KNOWN	MTHFD2P4	1	3	-0.715363
chr4	162521682	162522041	162521861	ENSG00000248396.1	+	processed_pseudogene	KNOWN	TOMM22P4	1	2	-0.976488
chr4	162709588	162709655	162709621	ENSG00000274761.1	-	miRNA	NOVEL	AC005150.3	1	1	-1.026403
chr4	162740668	162742048	162741358	ENSG00000248431.1	+	lincRNA	KNOWN	AC005150.1	1	2	-0.882013
chr4	162742591	162742677	162742634	ENSG00000273556.1	-	miRNA	NOVEL	AC005150.2	1	1	-0.882013
chr4	162858257	162858393	162858325	ENSG00000281116.1	-	miRNA	NOVEL	AC021134.1	1	1	-0.674268
chr4	162984795	162985416	162985105	ENSG00000251123.1	+	processed_pseudogene	KNOWN	RP11-580J4.1	1	1	-0.630474
chr4	163108785	163119965	163114375	ENSG00000250027.1	+	antisense	KNOWN	RP11-563E2.2	2	3	-0.621003
chr4	163110073	163166921	163138497	ENSG00000145414.8	-	protein_coding	KNOWN	NAF1	6	8	-0.568815
chr4	163265575	163266583	163266079	ENSG00000250547.1	-	processed_pseudogene	KNOWN	RP11-719L21.1	1	1	-0.534033
chr4	163323961	163344832	163334396	ENSG00000164128.6	-	protein_coding	KNOWN	NPY1R	7	5	-0.507980
chr4	163343939	163351934	163347936	ENSG00000164129.11	+	protein_coding	KNOWN	NPY5R	3	4	-0.456125
chr4	163382179	163382516	163382347	ENSG00000227283.1	+	processed_pseudogene	KNOWN	RPL35AP12	1	1	-0.849456
chr4	163471093	163473746	163472419	ENSG00000151005.4	-	protein_coding	KNOWN	TKTL2	1	1	-0.728302
chr4	163494442	163520539	163507490	ENSG00000198498.9	+	protein_coding	KNOWN	TMA16	9	7	-0.231022
chr4	163523292	163523386	163523339	ENSG00000264535.1	+	miRNA	NOVEL	AC093788.1	1	1	-0.314222
chr4	163524298	164384050	163954174	ENSG00000145416.13	-	protein_coding	KNOWN	MARCH1	15	10	-0.700200
chr4	163529771	163530697	163530234	ENSG00000273449.1	+	lincRNA	KNOWN	RP11-218F10.3	1	1	-0.248829
chr4	163828800	163829113	163828956	ENSG00000253001.1	-	misc_RNA	KNOWN	RN7SKP105	1	1	-0.390160
chr4	163932526	163933182	163932854	ENSG00000177803.7	+	processed_pseudogene	KNOWN	RP11-606P2.1	1	1	-0.754299
chr4	164188311	164190367	164189339	ENSG00000250746.1	+	processed_pseudogene	KNOWN	RP11-39C10.1	1	1	-0.841306
chr4	164197007	164197711	164197359	ENSG00000248546.3	-	processed_pseudogene	KNOWN	ANP32C	1	1	-0.627900
chr4	164597719	164597976	164597847	ENSG00000251162.1	+	processed_pseudogene	KNOWN	RP11-75A5.1	1	1	-0.760666
chr4	164620732	164620837	164620784	ENSG00000223037.1	+	snRNA	KNOWN	RNU6-284P	1	1	-0.632374
chr4	164725310	164726706	164726008	ENSG00000248162.1	+	processed_pseudogene	KNOWN	RP11-294O2.1	1	1	-0.536752
chr4	164754064	164803795	164778929	ENSG00000248771.5	+	lincRNA	KNOWN	LINC01207	2	4	-0.441038
chr4	164787290	164787396	164787343	ENSG00000201050.1	+	snRNA	KNOWN	RNU6-668P	1	1	-0.593575
chr4	164877004	164898965	164887984	ENSG00000248329.5	+	protein_coding	KNOWN	APELA	5	4	-0.557535
chr4	164915565	164916983	164916274	ENSG00000250227.1	+	processed_pseudogene	KNOWN	TRIM60P14	1	1	-0.092040
chr4	164920618	164921063	164920840	ENSG00000244146.1	-	processed_pseudogene	KNOWN	RP11-366M4.2	1	1	-0.092040
chr4	164929494	164929951	164929722	ENSG00000221891.2	-	processed_pseudogene	KNOWN	FAM218BP	1	1	-0.092040
chr4	164933086	164933506	164933296	ENSG00000270960.1	-	processed_pseudogene	KNOWN	RP11-366M4.18	1	1	-0.617822
chr4	164938322	164939990	164939156	ENSG00000248645.1	-	unprocessed_pseudogene	KNOWN	RP11-366M4.6	1	2	-0.617822
chr4	164943290	164943937	164943613	ENSG00000121089.4	+	processed_pseudogene	KNOWN	NACA3P	1	1	-0.617822
chr4	164948079	164949438	164948758	ENSG00000236941.6	+	processed_pseudogene	KNOWN	RP11-366M4.8	1	1	-0.617822
chr4	164954446	164977668	164966057	ENSG00000183439.6	-	protein_coding	KNOWN	TRIM61	2	5	-0.082913
chr4	164956948	164959122	164958035	ENSG00000250486.3	+	protein_coding	KNOWN	FAM218A	1	1	-0.086345
chr4	164968587	164970002	164969294	ENSG00000248632.1	-	processed_pseudogene	KNOWN	RP11-366M4.11	1	1	-0.086323
chr4	164987265	164987787	164987526	ENSG00000248229.1	+	processed_pseudogene	KNOWN	RP11-366M4.12	1	1	-0.075953
chr4	165007086	165007959	165007522	ENSG00000250887.1	-	lincRNA	KNOWN	RP11-366M4.13	1	2	-0.447883
chr4	165010459	165011851	165011155	ENSG00000250712.1	+	processed_pseudogene	KNOWN	RP11-366M4.14	1	1	-0.225867
chr4	165012366	165012845	165012605	ENSG00000240674.1	-	processed_pseudogene	KNOWN	RP11-366M4.1	1	1	-0.225867
chr4	165016887	165017433	165017160	ENSG00000276623.1	+	processed_pseudogene	KNOWN	RP11-366M4.19	1	1	-0.225867
chr4	165026261	165026944	165026602	ENSG00000250430.1	-	processed_pseudogene	KNOWN	RP11-366M4.15	1	1	-0.225867
chr4	165031953	165041744	165036848	ENSG00000176979.12	+	protein_coding	KNOWN	TRIM60	4	3	-0.361919
chr4	165045969	165046280	165046124	ENSG00000249617.1	+	processed_pseudogene	KNOWN	RP11-366M4.17	1	1	-0.361919
chr4	165059148	165060554	165059851	ENSG00000250374.3	+	processed_pseudogene	KNOWN	TRIM75P	1	1	-0.293662
chr4	165070608	165208549	165139578	ENSG00000170088.13	-	protein_coding	KNOWN	TMEM192	3	7	-0.305166
chr4	165207618	165323156	165265387	ENSG00000109466.13	+	protein_coding	KNOWN	KLHL2	10	15	-0.324025
chr4	165252580	165252661	165252620	ENSG00000200974.1	+	snRNA	KNOWN	RNU4-87P	1	1	-0.284863
chr4	165277984	165279645	165278814	ENSG00000229894.3	-	processed_pseudogene	KNOWN	RP11-668G10.2	1	1	-0.532797
chr4	165327623	165343160	165335391	ENSG00000052802.12	+	protein_coding	KNOWN	MSMO1	5	6	-0.128551
chr4	165361194	165498320	165429757	ENSG00000109472.13	+	protein_coding	KNOWN	CPE	5	9	-0.408618
chr4	165386242	165386337	165386289	ENSG00000207559.1	+	miRNA	KNOWN	MIR578	1	1	-0.294363
chr4	165404067	165406350	165405208	ENSG00000251596.1	-	processed_pseudogene	KNOWN	HADHAP1	1	1	-0.345817
chr4	165517255	165517501	165517378	ENSG00000248287.1	-	processed_pseudogene	KNOWN	SCGB1D5P	1	1	-0.074658
chr4	165547532	165551060	165549296	ENSG00000248327.1	-	processed_pseudogene	KNOWN	NOL8P1	1	1	-0.439131
chr4	165664350	165665671	165665010	ENSG00000250725.2	+	processed_pseudogene	KNOWN	RP11-511B7.1	1	3	-0.810312
chr4	165684639	165762778	165723708	ENSG00000249500.1	+	lincRNA	KNOWN	LINC01179	1	6	-0.559935
chr4	165873258	166103895	165988576	ENSG00000038295.7	+	protein_coding	KNOWN	TLL1	6	22	-0.569672
chr4	166053187	166053287	166053237	ENSG00000252959.1	-	rRNA	KNOWN	RNA5SP170	1	1	-0.642348
chr4	166227765	166227832	166227798	ENSG00000266254.1	+	miRNA	NOVEL	AC093874.1	1	1	-0.944350
chr4	166312935	166313034	166312984	ENSG00000206711.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.533328
chr4	166388701	166526119	166457410	ENSG00000249675.1	-	lincRNA	KNOWN	RP11-217C7.1	1	4	-0.578313
chr4	166733384	167234796	166984090	ENSG00000196104.10	-	protein_coding	KNOWN	SPOCK3	26	12	-0.720554
chr4	166918364	166918478	166918421	ENSG00000212373.1	-	rRNA	KNOWN	RNA5SP171	1	1	-0.560085
chr4	166981301	166981386	166981343	ENSG00000275159.1	-	miRNA	NOVEL	AC010103.1	1	1	-0.641834
chr4	167306910	167308789	167307849	ENSG00000250150.1	-	lincRNA	KNOWN	RP11-436A7.1	1	3	-0.553343
chr4	167400495	167400762	167400628	ENSG00000240772.3	-	misc_RNA	KNOWN	RN7SL776P	1	1	-0.302868
chr4	167648430	167648796	167648613	ENSG00000248913.1	+	processed_pseudogene	KNOWN	PHBP14	1	1	-0.683135
chr4	167662986	167663302	167663144	ENSG00000222721.1	+	misc_RNA	KNOWN	RN7SKP188	1	1	-0.924496
chr4	167741879	167742287	167742083	ENSG00000270336.1	-	processed_pseudogene	KNOWN	RP11-521F1.1	1	1	-0.767831
chr4	167946674	168113331	168030002	ENSG00000248601.1	-	antisense	KNOWN	RP11-310I9.1	1	4	-0.720457
chr4	168092515	168187690	168140102	ENSG00000109511.10	+	protein_coding	KNOWN	ANXA10	4	14	-0.477402
chr4	168216293	168318807	168267550	ENSG00000137628.16	-	protein_coding	KNOWN	DDX60	6	38	-0.475592
chr4	168356735	168537786	168447260	ENSG00000181381.13	-	protein_coding	KNOWN	DDX60L	16	38	-0.200202
chr4	168471409	168471539	168471474	ENSG00000207171.1	+	snoRNA	NOVEL	SNORA51	1	1	-0.414070
chr4	168497066	168928457	168712761	ENSG00000129116.17	+	protein_coding	KNOWN	PALLD	17	22	-0.022166
chr4	168598240	168598757	168598498	ENSG00000229226.3	-	processed_pseudogene	KNOWN	BTF3L4P4	1	2	-0.186309
chr4	168647896	168648587	168648241	ENSG00000249623.1	-	antisense	KNOWN	RP11-610J23.1	1	3	0.162381
chr4	168686608	168686716	168686662	ENSG00000206613.1	-	snRNA	KNOWN	RNU6-1336P	1	1	-0.037939
chr4	168755816	168756382	168756099	ENSG00000214676.4	+	processed_pseudogene	KNOWN	RPL9P16	1	1	0.213298
chr4	168828919	168832937	168830928	ENSG00000249609.1	-	antisense	KNOWN	RP11-635L1.3	1	2	0.196357
chr4	168843988	168844735	168844361	ENSG00000279384.1	+	TEC	KNOWN	RP11-635L1.2	1	1	0.216843
chr4	168863770	169010275	168937022	ENSG00000145439.11	-	protein_coding	KNOWN	CBR4	7	6	-0.022289
chr4	168885355	168885461	168885408	ENSG00000201176.1	+	snRNA	KNOWN	RNU6-853P	1	1	0.028666
chr4	169005249	169005344	169005296	ENSG00000201818.1	+	misc_RNA	KNOWN	RNY4P17	1	1	-0.293130
chr4	169010430	169010939	169010684	ENSG00000251445.1	+	antisense	KNOWN	RP11-483A20.3	1	2	-0.227888
chr4	169094256	169271105	169182680	ENSG00000154447.14	-	protein_coding	KNOWN	SH3RF1	5	12	-0.021867
chr4	169166272	169167117	169166694	ENSG00000214671.4	+	processed_pseudogene	KNOWN	RPL6P12	1	1	-0.200189
chr4	169201794	169220349	169211071	ENSG00000251171.1	+	antisense	KNOWN	RP11-327O17.2	1	5	-0.192727
chr4	169393275	169612629	169502952	ENSG00000137601.15	-	protein_coding	KNOWN	NEK1	8	36	-0.378236
chr4	169612633	169723673	169668153	ENSG00000109572.13	+	protein_coding	KNOWN	CLCN3	11	14	-0.248261
chr4	169729465	169757953	169743709	ENSG00000056050.6	-	protein_coding	KNOWN	C4orf27	3	8	-0.172990
chr4	169785194	169785280	169785237	ENSG00000264713.1	-	miRNA	NOVEL	AC106878.1	1	1	-0.248499
chr4	169791221	169791702	169791461	ENSG00000229204.3	-	processed_pseudogene	KNOWN	PTGES3P3	1	1	-0.206920
chr4	169832653	169833363	169833008	ENSG00000248625.1	+	processed_pseudogene	KNOWN	RP11-205M3.1	1	1	-0.261187
chr4	169917761	169975902	169946831	ENSG00000248319.1	-	lincRNA	KNOWN	RP11-205M3.3	1	5	-0.172368
chr4	169924288	169924339	169924313	ENSG00000278584.1	-	miRNA	NOVEL	AC079768.1	1	1	0.151231
chr4	169945981	169963334	169954657	ENSG00000251200.1	+	antisense	KNOWN	RP11-6E9.5	1	2	-0.254045
chr4	169981747	169993806	169987776	ENSG00000249955.1	+	antisense	KNOWN	RP11-6E9.4	1	3	-0.250745
chr4	169986597	170033031	170009814	ENSG00000198948.11	-	protein_coding	KNOWN	MFAP3L	11	4	-0.196584
chr4	170060222	170091699	170075960	ENSG00000109576.13	-	protein_coding	KNOWN	AADAT	8	14	-0.211962
chr4	170099818	170100104	170099961	ENSG00000248822.1	+	processed_pseudogene	KNOWN	APOBEC3AP1	1	1	-0.453244
chr4	170141292	170142532	170141912	ENSG00000248739.1	-	processed_pseudogene	KNOWN	RP11-654F3.1	1	2	-0.499923
chr4	170273919	170283079	170278499	ENSG00000250266.1	+	lincRNA	KNOWN	LINC01612	1	3	-0.365481
chr4	170343089	170372311	170357700	ENSG00000251061.2	+	lincRNA	KNOWN	RP11-789C1.2	1	3	-0.530477
chr4	170481695	170482195	170481945	ENSG00000250082.1	-	processed_pseudogene	KNOWN	RP11-796L2.1	1	1	-0.606352
chr4	170581470	170605450	170593460	ENSG00000181359.5	-	transcribed_processed_pseudogene	KNOWN	HSP90AA6P	2	2	-0.661068
chr4	170742469	170743718	170743093	ENSG00000250968.1	-	lincRNA	KNOWN	RP11-322J23.1	1	2	-0.507768
chr4	170814339	170814548	170814443	ENSG00000249943.1	-	processed_pseudogene	KNOWN	RP11-213L8.1	1	1	-0.664083
chr4	170891467	170891597	170891532	ENSG00000251961.1	+	snRNA	KNOWN	RNU6ATAC13P	1	1	-1.014208
chr4	171040602	171059163	171049882	ENSG00000248872.1	+	lincRNA	KNOWN	RP11-344G13.1	2	5	-0.664608
chr4	171113789	171114581	171114185	ENSG00000249525.1	+	processed_pseudogene	KNOWN	RP11-344G13.2	1	2	-0.497543
chr4	171169209	171169942	171169575	ENSG00000248755.1	-	processed_pseudogene	KNOWN	RP11-384D10.1	1	1	-0.636204
chr4	171186184	171186292	171186238	ENSG00000278502.1	+	miRNA	KNOWN	MIR6082	1	1	-0.543011
chr4	171289475	171298267	171293871	ENSG00000248339.1	-	lincRNA	KNOWN	RP11-717H13.1	1	2	-0.772606
chr4	171553000	171564267	171558633	ENSG00000251176.1	-	lincRNA	KNOWN	RP11-97E7.1	1	3	-0.456212
chr4	171602683	171638763	171620723	ENSG00000249297.1	-	lincRNA	KNOWN	RP11-97E7.2	1	5	-0.515825
chr4	171812254	173041559	172426906	ENSG00000174473.15	+	protein_coding	KNOWN	GALNTL6	7	13	-0.597619
chr4	172380028	172380487	172380257	ENSG00000248637.1	-	processed_pseudogene	KNOWN	RP11-485C11.1	1	1	-0.093223
chr4	173131928	173169652	173150790	ENSG00000245213.6	-	antisense	KNOWN	RP11-10K16.1	3	7	-0.511804
chr4	173141643	173141938	173141790	ENSG00000241652.3	+	misc_RNA	KNOWN	RN7SL253P	1	1	-0.460549
chr4	173168753	173323967	173246360	ENSG00000109586.11	+	protein_coding	KNOWN	GALNT7	7	12	-0.330094
chr4	173268160	173268233	173268196	ENSG00000221296.2	+	miRNA	KNOWN	MIR548T	1	1	-0.222323
chr4	173322206	173329694	173325950	ENSG00000248774.1	-	antisense	KNOWN	RP11-798M19.3	1	3	0.091992
chr4	173331695	173335125	173333410	ENSG00000164104.11	-	protein_coding	KNOWN	HMGB2	5	5	-0.201454
chr4	173363780	173370446	173367113	ENSG00000272870.1	-	antisense	KNOWN	RP11-798M19.6	4	3	-0.428933
chr4	173369969	173377532	173373750	ENSG00000164105.3	+	protein_coding	KNOWN	SAP30	2	4	-0.666634
chr4	173384701	173406380	173395540	ENSG00000164106.7	-	protein_coding	KNOWN	SCRG1	2	9	-0.461724
chr4	173419245	173420137	173419691	ENSG00000242882.1	-	processed_pseudogene	KNOWN	RPL5P11	1	1	-0.317771
chr4	173446603	173446704	173446653	ENSG00000252898.1	-	snRNA	KNOWN	RNU6-1096P	1	1	-0.327911
chr4	173467833	173470041	173468937	ENSG00000261646.1	-	lincRNA	KNOWN	RP11-489G11.3	1	1	-0.476123
chr4	173524969	173530229	173527599	ENSG00000164107.8	-	protein_coding	KNOWN	HAND2	4	4	0.007103
chr4	173527270	173591324	173559297	ENSG00000237125.8	+	antisense	KNOWN	HAND2-AS1	37	6	-0.391894
chr4	173593672	173594556	173594114	ENSG00000261672.1	+	lincRNA	KNOWN	RP11-475B2.1	1	1	-0.598680
chr4	173615936	173616906	173616421	ENSG00000234801.3	-	processed_pseudogene	KNOWN	MORF4	1	1	-0.176497
chr4	173633728	173634371	173634049	ENSG00000213370.3	-	processed_pseudogene	KNOWN	RANP6	1	1	-0.830006
chr4	173877471	173913252	173895361	ENSG00000250043.1	-	lincRNA	KNOWN	RP11-161D15.2	2	4	-0.508973
chr4	173897252	173929525	173913388	ENSG00000250708.1	+	lincRNA	KNOWN	RP11-161D15.1	2	4	-0.428056
chr4	173924207	173990861	173957534	ENSG00000251216.1	-	lincRNA	KNOWN	RP11-161D15.3	2	3	-0.654781
chr4	174094660	174220398	174157529	ENSG00000248174.5	-	lincRNA	KNOWN	RP11-148L24.1	2	5	-0.651121
chr4	174135055	174154637	174144846	ENSG00000250957.1	-	lincRNA	KNOWN	RP11-248N22.1	1	2	-0.821247
chr4	174164441	174168913	174166677	ENSG00000251213.1	-	lincRNA	KNOWN	RP11-248N22.2	1	3	-0.562680
chr4	174236658	174284264	174260461	ENSG00000164117.12	-	protein_coding	KNOWN	FBXO8	6	7	-0.498672
chr4	174283677	174333380	174308528	ENSG00000164118.12	+	protein_coding	KNOWN	CEP44	10	14	-0.581157
chr4	174354854	174376445	174365649	ENSG00000249875.1	-	lincRNA	KNOWN	RP11-51M24.1	1	3	-0.611271
chr4	174423795	174423864	174423829	ENSG00000265846.1	+	miRNA	KNOWN	MIR4276	1	1	-0.388634
chr4	174490177	174523154	174506665	ENSG00000164120.13	-	protein_coding	KNOWN	HPGD	14	7	-0.408026
chr4	174523701	174540344	174532022	ENSG00000250596.1	-	lincRNA	KNOWN	RP11-440I14.2	1	3	-0.408283
chr4	174536640	174540784	174538712	ENSG00000251584.1	+	lincRNA	KNOWN	RP11-440I14.3	1	3	-0.359572
chr4	174539189	174540255	174539722	ENSG00000250760.1	-	transcribed_processed_pseudogene	KNOWN	RP11-440I14.4	1	1	-0.359572
chr4	174636914	174829314	174733114	ENSG00000145451.12	-	protein_coding	KNOWN	GLRA3	4	10	-0.662604
chr4	174829668	174978180	174903924	ENSG00000168594.15	+	protein_coding	KNOWN	ADAM29	14	6	-0.624401
chr4	174923813	174924038	174923925	ENSG00000250200.1	-	processed_pseudogene	KNOWN	RP13-577H12.3	1	1	-0.834945
chr4	174927307	174927391	174927349	ENSG00000265493.1	-	miRNA	NOVEL	AC105914.1	1	1	-0.834945
chr4	174977571	174979381	174978476	ENSG00000250431.1	-	antisense	KNOWN	RP13-577H12.2	1	3	-0.607429
chr4	175017016	175019214	175018115	ENSG00000249411.1	+	processed_pseudogene	KNOWN	RP11-391J13.1	1	1	-0.533613
chr4	175286605	175290767	175288686	ENSG00000249284.1	+	processed_pseudogene	KNOWN	RP11-287F9.1	1	2	-0.744762
chr4	175346358	175403110	175374734	ENSG00000248551.1	-	lincRNA	KNOWN	RP11-287F9.2	1	3	-0.381488
chr4	175458289	175466697	175462493	ENSG00000249945.1	-	lincRNA	KNOWN	RP11-598D14.1	1	3	-0.449309
chr4	175494614	175496000	175495307	ENSG00000251174.1	+	processed_pseudogene	KNOWN	TSEN2P1	1	1	-0.496694
chr4	175574868	175576140	175575504	ENSG00000248574.1	+	processed_pseudogene	KNOWN	ADAM20P2	1	1	-0.387751
chr4	175632934	176002664	175817799	ENSG00000150625.16	-	protein_coding	KNOWN	GPM6A	21	8	-0.635008
chr4	175790307	175812189	175801248	ENSG00000249106.1	+	antisense	KNOWN	RP11-806K15.1	1	8	-0.546924
chr4	175962061	175962485	175962273	ENSG00000248249.1	+	processed_pseudogene	KNOWN	RP11-598O12.1	1	1	-0.736242
chr4	176012038	176014417	176013227	ENSG00000250372.1	-	processed_pseudogene	KNOWN	MARK2P4	1	1	-0.678082
chr4	176038083	176038188	176038135	ENSG00000264130.1	-	miRNA	NOVEL	AC110794.1	1	1	-0.591035
chr4	176065834	176182818	176124326	ENSG00000150627.15	+	protein_coding	KNOWN	WDR17	8	31	-0.663157
chr4	176098163	176098285	176098224	ENSG00000201516.1	+	snoRNA	NOVEL	SNORA51	1	1	-0.715363
chr4	176184638	176195671	176190154	ENSG00000150628.6	-	protein_coding	KNOWN	SPATA4	3	6	-0.439163
chr4	176213673	176277571	176245622	ENSG00000164122.8	-	protein_coding	KNOWN	ASB5	5	7	-0.397103
chr4	176308268	176320458	176314363	ENSG00000248980.1	-	antisense	KNOWN	RP11-87F15.2	1	3	-0.171038
chr4	176319964	176332245	176326104	ENSG00000129128.12	+	protein_coding	KNOWN	SPCS3	4	5	-0.269120
chr4	176631392	176633231	176632311	ENSG00000248480.1	-	processed_pseudogene	KNOWN	RP11-313E19.1	1	3	-0.219952
chr4	176669621	176706145	176687883	ENSG00000248388.5	+	antisense	KNOWN	RP11-313E19.2	2	3	-0.198786
chr4	176683538	176792727	176738132	ENSG00000150630.3	-	protein_coding	KNOWN	VEGFC	2	7	-0.290289
chr4	176866614	176875457	176871035	ENSG00000249458.1	-	lincRNA	KNOWN	RP11-624A4.1	1	3	-0.149863
chr4	176875702	176880605	176878153	ENSG00000250263.1	+	lincRNA	KNOWN	RP11-765K14.1	1	2	-0.048871
chr4	177181442	177181741	177181591	ENSG00000222859.1	+	misc_RNA	KNOWN	RN7SKP136	1	1	-0.537489
chr4	177242539	177248773	177245656	ENSG00000249008.1	-	lincRNA	KNOWN	RP11-487E13.1	1	4	-0.269408
chr4	177309836	177362943	177336389	ENSG00000109674.3	+	protein_coding	KNOWN	NEIL3	2	10	-0.195673
chr4	177343004	177357032	177350018	ENSG00000249084.1	-	antisense	KNOWN	RP11-376O6.2	1	2	-0.311396
chr4	177430770	177442503	177436636	ENSG00000038002.8	-	protein_coding	KNOWN	AGA	6	9	-0.333772
chr4	177444979	177677126	177561052	ENSG00000250131.1	+	antisense	KNOWN	RP11-130F10.1	1	6	-0.333854
chr4	177457111	177457228	177457169	ENSG00000201931.1	-	rRNA	KNOWN	RNA5SP172	1	1	0.056147
chr4	177544477	177544564	177544520	ENSG00000221499.1	-	miRNA	NOVEL	AC078881.1	1	1	-0.489238
chr4	177686673	177691068	177688870	ENSG00000251416.1	-	lincRNA	KNOWN	RP11-140M13.1	1	2	-0.348162
chr4	177728757	177990750	177859753	ENSG00000231171.3	+	lincRNA	KNOWN	LINC01098	1	6	-0.633299
chr4	177729638	177907936	177818787	ENSG00000251504.1	-	lincRNA	KNOWN	LINC01099	3	5	-0.546267
chr4	178116721	178116861	178116791	ENSG00000253000.1	-	snRNA	KNOWN	RNU1-45P	1	1	-0.862779
chr4	178286695	178287285	178286990	ENSG00000241877.1	+	processed_pseudogene	KNOWN	RP11-84H6.1	1	1	-0.817810
chr4	178401455	178401600	178401527	ENSG00000280918.1	+	miRNA	NOVEL	AC108205.1	1	1	-1.108827
chr4	178406695	178406830	178406762	ENSG00000201727.1	+	rRNA	KNOWN	RNA5SP173	1	1	-1.108827
chr4	178685886	178685956	178685921	ENSG00000212191.1	-	snoRNA	NOVEL	SNORD65	1	1	-0.844283
chr4	179069437	179069594	179069515	ENSG00000250839.1	+	unprocessed_pseudogene	KNOWN	RP11-296L20.1	1	1	-0.461752
chr4	179389134	179465305	179427219	ENSG00000250993.1	-	lincRNA	KNOWN	RP11-404J23.1	1	3	-0.720834
chr4	179856853	179857581	179857217	ENSG00000248921.1	+	processed_pseudogene	KNOWN	RP11-774G5.1	1	2	-0.543597
chr4	180573464	180574027	180573745	ENSG00000251025.1	-	processed_pseudogene	KNOWN	RP11-751A18.1	1	1	-0.429777
chr4	180731164	180759038	180745101	ENSG00000249883.1	-	lincRNA	KNOWN	RP11-460H9.1	1	4	-0.506802
chr4	181064089	181159149	181111619	ENSG00000248197.1	-	lincRNA	KNOWN	LINC00290	1	3	-0.580459
chr4	181237358	181237564	181237461	ENSG00000248770.1	-	unprocessed_pseudogene	KNOWN	RP11-665C14.1	1	1	-0.459023
chr4	181261161	181265029	181263095	ENSG00000249460.1	-	lincRNA	KNOWN	RP11-665C14.2	1	2	-0.518393
chr4	181522666	181523001	181522833	ENSG00000225356.3	+	processed_pseudogene	KNOWN	RP11-433O3.1	1	1	-0.370351
chr4	181820019	181829973	181824996	ENSG00000251336.1	-	lincRNA	KNOWN	RP11-540E16.2	1	3	-0.423597
chr4	181834865	181835108	181834986	ENSG00000251742.1	-	misc_RNA	KNOWN	RN7SKP13	1	1	-0.599323
chr4	181874438	182145249	182009843	ENSG00000177822.7	-	antisense	KNOWN	AC108142.1	8	5	-0.289115
chr4	181905790	181906467	181906128	ENSG00000251433.1	-	processed_pseudogene	KNOWN	CCNHP1	1	1	-0.484797
chr4	182143987	182803024	182473505	ENSG00000218336.7	+	protein_coding	KNOWN	TENM3	7	28	-0.206437
chr4	182144852	182190382	182167617	ENSG00000248266.1	+	sense_intronic	KNOWN	RP11-402C9.1	1	2	-0.241005
chr4	182169293	182169378	182169335	ENSG00000221227.1	+	miRNA	KNOWN	MIR1305	1	1	-0.169133
chr4	182548659	182548779	182548719	ENSG00000252343.1	+	snRNA	KNOWN	RNU2-34P	1	1	-0.436108
chr4	182631454	182631688	182631571	ENSG00000251714.1	-	misc_RNA	KNOWN	RN7SKP67	1	1	-0.165989
chr4	182697902	182708042	182702972	ENSG00000248816.1	-	antisense	KNOWN	RP11-18D7.3	1	2	-0.441227
chr4	182772565	182773931	182773248	ENSG00000248694.1	-	antisense	KNOWN	RP11-18D7.2	1	2	-0.013718
chr4	182826228	182826365	182826296	ENSG00000221186.1	+	miRNA	NOVEL	AC114798.1	1	1	0.324485
chr4	182881777	182882203	182881990	ENSG00000272646.1	-	lincRNA	KNOWN	RP11-188P17.2	1	1	0.393819
chr4	182890060	182917936	182903998	ENSG00000129187.14	-	protein_coding	KNOWN	DCTD	17	7	-0.035414
chr4	183028601	183029720	183029160	ENSG00000250636.1	-	processed_pseudogene	KNOWN	RP11-335L23.2	1	2	0.026774
chr4	183037665	183040119	183038892	ENSG00000230219.3	+	transcribed_processed_pseudogene	KNOWN	FAM92A1P2	2	2	-0.070280
chr4	183075480	183076033	183075756	ENSG00000273180.1	-	lincRNA	KNOWN	RP11-335L23.4	1	1	0.003554
chr4	183094423	183095056	183094739	ENSG00000272784.1	-	lincRNA	KNOWN	RP11-335L23.5	1	1	0.275704
chr4	183097017	183099199	183098108	ENSG00000251359.4	-	lincRNA	KNOWN	WWC2-AS2	1	1	0.275704
chr4	183099293	183320777	183210035	ENSG00000151718.15	+	protein_coding	KNOWN	WWC2	10	24	0.047949
chr4	183169348	183169417	183169382	ENSG00000252702.1	-	snRNA	KNOWN	RNU7-158P	1	1	0.268870
chr4	183233628	183240634	183237131	ENSG00000251128.1	-	antisense	KNOWN	WWC2-AS1	1	2	-0.181656
chr4	183318194	183320774	183319484	ENSG00000177300.6	-	protein_coding	KNOWN	CLDN22	1	1	0.204467
chr4	183321764	183322426	183322095	ENSG00000185758.7	-	protein_coding	KNOWN	CLDN24	2	1	0.204467
chr4	183380345	183381705	183381025	ENSG00000250292.1	+	processed_pseudogene	KNOWN	RP11-451F20.1	1	1	0.348332
chr4	183384553	183384620	183384586	ENSG00000263395.1	+	miRNA	NOVEL	AC093844.1	1	1	0.348332
chr4	183418890	183419805	183419347	ENSG00000248376.2	-	processed_pseudogene	KNOWN	RP11-692E14.1	1	1	0.180801
chr4	183444591	183448198	183446394	ENSG00000168564.5	+	protein_coding	KNOWN	CDKN2AIP	5	3	0.431622
chr4	183483490	183484185	183483837	ENSG00000213434.2	+	processed_pseudogene	KNOWN	VTI1BP2	1	1	0.395384
chr4	183494938	183504494	183499716	ENSG00000232648.3	-	antisense	KNOWN	RP11-367N14.2	1	3	-0.172711
chr4	183504994	183511096	183508045	ENSG00000168556.6	+	protein_coding	KNOWN	ING2	2	2	-0.150324
chr4	183516894	183517527	183517210	ENSG00000272744.1	+	lincRNA	KNOWN	RP11-367N14.3	1	1	-0.048186
chr4	183639635	183659225	183649430	ENSG00000182552.14	-	protein_coding	KNOWN	RWDD4	7	8	0.068260
chr4	183653572	183653676	183653624	ENSG00000252157.1	-	snRNA	KNOWN	RNU6-479P	1	1	-0.090385
chr4	183659267	183713594	183686430	ENSG00000168538.15	+	protein_coding	KNOWN	TRAPPC11	10	31	-0.073250
chr4	183675603	183675715	183675659	ENSG00000201433.1	-	snRNA	KNOWN	RNU6-335P	1	1	-0.026653
chr4	183705931	183706031	183705981	ENSG00000251739.1	+	snRNA	KNOWN	RNU6-1053P	1	1	-0.087987
chr4	183853431	184023526	183938478	ENSG00000173320.9	+	protein_coding	KNOWN	STOX2	5	4	-0.293485
chr4	183987678	183988750	183988214	ENSG00000248206.1	+	sense_intronic	KNOWN	RP11-739P1.2	1	3	-0.265078
chr4	184072403	184073039	184072721	ENSG00000250726.1	+	processed_pseudogene	KNOWN	RP11-616K6.1	1	1	-0.174288
chr4	184088706	184221230	184154968	ENSG00000164303.10	-	protein_coding	KNOWN	ENPP6	4	8	-0.313568
chr4	184254509	184255330	184254919	ENSG00000240159.1	+	processed_pseudogene	KNOWN	RP11-162O12.1	1	1	-0.541645
chr4	184267357	184267431	184267394	ENSG00000221523.1	-	miRNA	NOVEL	AC079080.1	1	1	-0.541645
chr4	184278936	184279233	184279084	ENSG00000244512.3	+	misc_RNA	KNOWN	RN7SL28P	1	1	-0.472793
chr4	184299129	184299640	184299384	ENSG00000227765.4	-	processed_pseudogene	KNOWN	MYL12BP2	1	1	-0.461944
chr4	184340756	184353977	184347366	ENSG00000180712.3	-	lincRNA	KNOWN	RP11-290F5.2	2	3	-0.075326
chr4	184365183	184382306	184373744	ENSG00000249096.6	-	lincRNA	KNOWN	RP11-290F5.1	3	6	-0.130137
chr4	184387713	184474580	184431146	ENSG00000168310.10	-	protein_coding	KNOWN	IRF2	9	9	0.074874
chr4	184431966	184432049	184432007	ENSG00000251878.1	+	snoRNA	NOVEL	SNORD79	1	1	-0.139634
chr4	184471924	184472609	184472266	ENSG00000270426.1	-	sense_intronic	KNOWN	RP11-326I11.5	1	1	0.435066
chr4	184474802	184477304	184476053	ENSG00000271646.1	+	lincRNA	KNOWN	RP11-326I11.3	1	1	0.435066
chr4	184506460	184537554	184522007	ENSG00000271538.5	-	lincRNA	KNOWN	RP11-326I11.4	2	3	-0.006274
chr4	184559175	184559783	184559479	ENSG00000249056.1	-	processed_pseudogene	KNOWN	RP11-326I11.1	1	1	-0.278991
chr4	184584093	184625030	184604561	ENSG00000254233.1	-	lincRNA	KNOWN	RP11-242J7.1	3	3	-0.012157
chr4	184627696	184649509	184638602	ENSG00000164305.17	-	protein_coding	KNOWN	CASP3	7	8	0.028326
chr4	184649613	184694963	184672288	ENSG00000164306.10	+	protein_coding	KNOWN	PRIMPOL	11	14	-0.034679
chr4	184694618	184734133	184714375	ENSG00000151725.11	-	protein_coding	KNOWN	CENPU	6	13	-0.181114
chr4	184755595	184826818	184791206	ENSG00000151726.13	-	protein_coding	KNOWN	ACSL1	12	22	-0.100302
chr4	184798296	184799046	184798671	ENSG00000249138.1	-	transcribed_processed_pseudogene	KNOWN	SLED1	2	1	-0.143386
chr4	184813619	184821300	184817459	ENSG00000251139.2	+	antisense	KNOWN	RP11-701P16.2	1	3	-0.046985
chr4	184844585	184855751	184850168	ENSG00000251230.5	-	lincRNA	KNOWN	MIR3945HG	2	3	0.050412
chr4	184851013	184851110	184851061	ENSG00000266698.1	-	miRNA	KNOWN	MIR3945	1	1	-0.077933
chr4	184893871	184899454	184896662	ENSG00000249173.5	-	lincRNA	KNOWN	LINC01093	3	3	-0.190595
chr4	184910889	184911352	184911120	ENSG00000251147.1	-	processed_pseudogene	KNOWN	RP11-701P16.3	1	1	-0.233408
chr4	184938383	184938440	184938411	ENSG00000263458.1	-	miRNA	KNOWN	MIR4455	1	1	-0.310891
chr4	184984277	184988127	184986202	ENSG00000279460.1	-	TEC	KNOWN	RP11-517M22.1	1	1	-0.003165
chr4	184988997	185005186	184997091	ENSG00000248517.1	+	lincRNA	KNOWN	RP11-386B13.4	1	2	-0.099390
chr4	185018841	185020804	185019822	ENSG00000187821.8	+	protein_coding	KNOWN	HELT	4	4	-0.187625
chr4	185051896	185107248	185079572	ENSG00000250754.5	+	lincRNA	KNOWN	RP11-386B13.3	3	9	-0.312448
chr4	185064981	185065323	185065152	ENSG00000249520.1	+	processed_pseudogene	KNOWN	RP11-386B13.1	1	1	-0.077933
chr4	185122322	185122422	185122372	ENSG00000265619.1	+	miRNA	NOVEL	AC093824.1	1	1	-0.005856
chr4	185143241	185150382	185146811	ENSG00000151729.10	+	protein_coding	KNOWN	SLC25A4	2	4	-0.004411
chr4	185159665	185209504	185184584	ENSG00000164323.12	-	protein_coding	KNOWN	CFAP97	5	5	-0.158914
chr4	185204237	185370185	185287211	ENSG00000109762.15	+	protein_coding	KNOWN	SNX25	7	19	0.076635
chr4	185363879	185395899	185379889	ENSG00000109771.15	-	protein_coding	KNOWN	LRP2BP	4	9	-0.145631
chr4	185370725	185390928	185380826	ENSG00000250410.1	+	antisense	KNOWN	RP11-714G18.1	1	3	-0.331395
chr4	185396021	185400628	185398324	ENSG00000186352.8	+	protein_coding	KNOWN	ANKRD37	6	5	0.258002
chr4	185399540	185425985	185412762	ENSG00000109775.10	-	protein_coding	KNOWN	UFSP2	9	12	-0.205289
chr4	185415973	185416086	185416029	ENSG00000207231.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.508401
chr4	185426249	185449826	185438037	ENSG00000205129.8	+	protein_coding	KNOWN	C4orf47	4	7	-0.095511
chr4	185445182	185471759	185458470	ENSG00000168491.9	-	protein_coding	KNOWN	CCDC110	9	7	-0.163741
chr4	185471516	185472263	185471889	ENSG00000249679.1	+	antisense	KNOWN	RP11-279O9.4	1	2	0.213007
chr4	185500660	185535612	185518136	ENSG00000154553.13	-	protein_coding	KNOWN	PDLIM3	13	8	-0.447338
chr4	185585444	185956652	185771048	ENSG00000154556.17	-	protein_coding	KNOWN	SORBS2	64	24	-0.288015
chr4	185587909	185594003	185590956	ENSG00000233110.1	+	antisense	KNOWN	RP11-301L8.2	1	4	-0.424145
chr4	185665885	185675417	185670651	ENSG00000235902.1	+	antisense	KNOWN	RP11-626E13.1	1	2	-0.371743
chr4	185709873	185709967	185709920	ENSG00000207497.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.325620
chr4	185918140	185919460	185918800	ENSG00000235149.1	+	lincRNA	KNOWN	RP11-45I20.1	1	2	-0.511781
chr4	186026456	186026586	186026521	ENSG00000222727.1	-	snRNA	KNOWN	RNU4-64P	1	1	-0.273526
chr4	186069152	186088069	186078610	ENSG00000164342.12	+	protein_coding	KNOWN	TLR3	5	5	-0.105485
chr4	186104419	186172667	186138543	ENSG00000109794.13	+	protein_coding	KNOWN	FAM149A	18	14	-0.345064
chr4	186130021	186130155	186130088	ENSG00000253013.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.513036
chr4	186157896	186158843	186158369	ENSG00000250327.1	+	processed_pseudogene	KNOWN	RPSAP70	1	2	-0.469566
chr4	186170863	186171257	186171060	ENSG00000251008.1	-	processed_pseudogene	KNOWN	ORAOV1P1	1	1	-0.240584
chr4	186189032	186191490	186190261	ENSG00000279943.1	-	TEC	KNOWN	FLJ38576	1	1	-0.268919
chr4	186191520	186213456	186202488	ENSG00000145476.15	+	protein_coding	KNOWN	CYP4V2	4	11	-0.273016
chr4	186208979	186258471	186233725	ENSG00000164344.15	+	protein_coding	KNOWN	KLKB1	7	15	-0.263872
chr4	186265945	186288806	186277375	ENSG00000088926.13	+	protein_coding	KNOWN	F11	7	15	-0.556306
chr4	186286094	186500997	186393545	ENSG00000251165.5	-	antisense	KNOWN	F11-AS1	4	6	-0.357348
chr4	186328716	186329601	186329158	ENSG00000213332.4	-	processed_pseudogene	KNOWN	SLC25A5P6	1	1	-0.504466
chr4	186426546	186555328	186490937	ENSG00000272297.2	-	protein_coding	KNOWN	RP11-215A19.2	1	2	-0.274864
chr4	186501109	186501215	186501162	ENSG00000212387.1	+	snRNA	KNOWN	RNU6-1055P	1	1	-0.380597
chr4	186533655	186555567	186544611	ENSG00000168412.6	-	protein_coding	KNOWN	MTNR1A	1	2	-0.217304
chr4	186587783	186726722	186657252	ENSG00000083857.13	-	protein_coding	KNOWN	FAT1	12	29	-0.037478
chr4	186890969	186892366	186891667	ENSG00000250829.2	+	lincRNA	KNOWN	RP11-11N5.1	1	2	-0.231797
chr4	186892552	186892983	186892767	ENSG00000272218.1	+	lincRNA	KNOWN	RP11-11N5.3	1	1	-0.231797
chr4	186900540	186900838	186900689	ENSG00000249539.1	+	processed_pseudogene	KNOWN	MRPS36P2	1	1	-0.231797
chr4	186979490	187021973	187000731	ENSG00000249742.1	-	lincRNA	KNOWN	RP11-217E13.1	1	3	-0.254205
chr4	187060099	187060930	187060514	ENSG00000250971.1	+	lincRNA	KNOWN	RP11-696F12.1	1	2	-0.056107
chr4	187201986	187209346	187205666	ENSG00000249747.1	+	lincRNA	KNOWN	RP11-308K2.1	2	3	-0.109642
chr4	187304083	187309682	187306882	ENSG00000250658.1	-	lincRNA	KNOWN	RP11-138B4.1	1	4	-0.135609
chr4	187370648	187371921	187371284	ENSG00000250042.1	+	lincRNA	KNOWN	RP11-91J3.2	1	3	-0.293130
chr4	187413564	187415697	187414630	ENSG00000250620.1	+	lincRNA	KNOWN	RP11-91J3.3	1	2	-0.320269
chr4	187423800	187423898	187423849	ENSG00000277323.1	-	miRNA	NOVEL	AC093763.1	1	1	-0.320269
chr4	187441677	187444298	187442987	ENSG00000251643.1	-	processed_pseudogene	KNOWN	RP11-91J3.1	1	3	-0.235894
chr4	187516153	187517208	187516680	ENSG00000251490.1	-	lincRNA	KNOWN	RP11-237D3.1	1	2	0.091992
chr4	187532878	187672641	187602759	ENSG00000250590.5	-	lincRNA	KNOWN	RP11-565A3.2	4	5	-0.324796
chr4	187613765	187660369	187637067	ENSG00000249642.1	+	lincRNA	KNOWN	RP11-565A3.1	2	3	-0.463524
chr4	187746094	187748199	187747146	ENSG00000249162.1	-	processed_pseudogene	KNOWN	ADAM20P3	1	1	-0.296170
chr4	187970273	187971284	187970778	ENSG00000213331.4	+	processed_pseudogene	KNOWN	RP11-713C19.2	1	2	-0.117727
chr4	187995771	188005050	188000410	ENSG00000179059.9	+	protein_coding	KNOWN	ZFP42	3	4	0.035036
chr4	188091273	188109603	188100438	ENSG00000179046.8	-	protein_coding	KNOWN	TRIML2	7	8	-0.183643
chr4	188106558	188106914	188106736	ENSG00000241011.1	+	processed_pseudogene	KNOWN	RP11-713C19.1	1	1	-0.183643
chr4	188121531	188121634	188121582	ENSG00000201085.1	-	snRNA	KNOWN	RNU6-173P	1	1	-0.295612
chr4	188139419	188147743	188143581	ENSG00000184108.7	+	protein_coding	KNOWN	TRIML1	3	6	-0.010491
chr4	188140822	188143379	188142100	ENSG00000247130.2	-	antisense	KNOWN	RP11-366H4.3	1	2	-0.010491
chr4	188160065	188161139	188160602	ENSG00000248370.1	+	lincRNA	KNOWN	RP11-366H4.1	1	2	0.224240
chr4	188207839	188207890	188207864	ENSG00000281034.1	+	miRNA	NOVEL	AC138781.1	1	1	-0.114459
chr4	188349376	188350024	188349700	ENSG00000242169.2	-	processed_pseudogene	KNOWN	RP11-219G10.1	1	1	-0.688351
chr4	188387471	188389666	188388568	ENSG00000248880.1	-	processed_pseudogene	KNOWN	ICE2P1	1	2	-0.503024
chr4	188400736	188681051	188540893	ENSG00000249378.5	+	lincRNA	KNOWN	LINC01060	6	6	-0.334924
chr4	188630924	188631747	188631335	ENSG00000250523.1	+	processed_pseudogene	KNOWN	RP11-756P10.1	1	2	-0.577860
chr4	188713644	188715442	188714543	ENSG00000275826.1	+	processed_pseudogene	KNOWN	RP11-756P10.7	1	1	-0.374030
chr4	188716665	188716725	188716695	ENSG00000252275.1	-	snRNA	KNOWN	RNU7-192P	1	1	-0.374030
chr4	188738373	188739494	188738933	ENSG00000180015.12	+	processed_pseudogene	KNOWN	RP11-756P10.3	1	1	-0.543597
chr4	188740507	188741281	188740894	ENSG00000278974.1	-	TEC	KNOWN	RP11-756P10.6	1	1	-0.543597
chr4	188757679	188778979	188768329	ENSG00000249269.1	+	lincRNA	KNOWN	RP11-756P10.4	1	3	-0.492858
chr4	188776657	188785511	188781084	ENSG00000251619.1	+	lincRNA	KNOWN	RP11-756P10.5	1	3	-0.504111
chr4	188777679	188796633	188787156	ENSG00000250626.2	-	lincRNA	KNOWN	RP11-756P10.2	1	3	-0.433472
chr4	188990715	189002075	188996395	ENSG00000250024.1	-	lincRNA	KNOWN	RP11-818C3.1	1	2	-0.411899
chr4	189193100	189204877	189198988	ENSG00000251310.1	+	lincRNA	KNOWN	RP11-706F1.1	1	2	-0.594254
chr4	189288677	189291336	189290006	ENSG00000249877.1	-	lincRNA	KNOWN	RP11-706F1.2	1	2	-0.535781
chr4	189472965	189475192	189474078	ENSG00000205100.2	+	transcribed_processed_pseudogene	KNOWN	HSP90AA4P	2	4	-0.372412
chr4	189659605	189661486	189660545	ENSG00000250739.1	+	lincRNA	KNOWN	LINC01262	1	3	-0.362772
chr4	189703881	189704490	189704185	ENSG00000272566.1	-	lincRNA	KNOWN	RP11-462G22.2	1	1	-0.402272
chr4	189709539	189709714	189709626	ENSG00000202215.1	-	snRNA	KNOWN	RNU1-51P	1	1	-0.402272
chr4	189780336	189940271	189860303	ENSG00000245685.6	-	lincRNA	KNOWN	AF146191.4	4	4	-0.272381
chr4	189881515	189884868	189883191	ENSG00000250666.1	+	lincRNA	KNOWN	LINC01596	1	2	-0.265330
chr4	189940788	189963204	189951996	ENSG00000109536.11	+	protein_coding	KNOWN	FRG1	7	9	-0.579180
chr4	189973599	189973847	189973723	ENSG00000249462.1	-	processed_pseudogene	KNOWN	MLLT10P2	1	1	-0.338085
chr4	189979902	189982379	189981140	ENSG00000271307.3	+	processed_pseudogene	KNOWN	AF146191.8	1	6	-0.338085
chr4	189982523	189984871	189983697	ENSG00000251297.1	-	unprocessed_pseudogene	KNOWN	TUBB7P	1	4	-0.338085
chr4	190015138	190015255	190015196	ENSG00000199572.1	+	rRNA	KNOWN	RNA5SP174	1	1	-0.360520
chr4	190017696	190017814	190017755	ENSG00000201145.1	+	rRNA	KNOWN	RNA5SP175	1	1	-0.360520
chr4	190021407	190022665	190022036	ENSG00000224807.5	-	unprocessed_pseudogene	KNOWN	DUX4L9	1	1	-0.360520
chr4	190024351	190027257	190025804	ENSG00000205097.6	-	protein_coding	KNOWN	FRG2	2	4	-0.360520
chr4	190037916	190038399	190038157	ENSG00000250053.1	-	processed_pseudogene	KNOWN	RARRES2P4	1	1	0.277644
chr4	190041342	190043414	190042378	ENSG00000214273.4	+	processed_pseudogene	KNOWN	AGGF1P1	1	1	0.277644
chr4	190057902	190063005	190060453	ENSG00000249003.1	-	unprocessed_pseudogene	KNOWN	CLUHP4	1	12	-0.028863
chr4	190060380	190060475	190060427	ENSG00000221407.1	-	miRNA	NOVEL	U85056.1	1	1	-0.028863
chr4	190064502	190067864	190066183	ENSG00000281591.1	+	lincRNA	KNOWN	DBET	1	1	-0.028863
chr4	190065233	190065914	190065573	ENSG00000277162.1	+	unprocessed_pseudogene	KNOWN	DUX4L30	1	1	-0.028863
chr4	190067935	190069209	190068572	ENSG00000281720.1	+	unprocessed_pseudogene	KNOWN	DUX4L8	1	1	-0.028863
chr4	190069302	190069385	190069343	ENSG00000261806.2	+	miRNA	NOVEL	AC126281.1	1	1	-0.028863
chr4	190071232	190072506	190071869	ENSG00000281652.1	+	unprocessed_pseudogene	KNOWN	DUX4L7	1	1	0.487163
chr4	190072599	190072682	190072640	ENSG00000275378.1	+	miRNA	NOVEL	AC126281.3	1	1	0.487163
chr4	190074525	190075799	190075162	ENSG00000281058.1	+	unprocessed_pseudogene	KNOWN	DUX4L6	1	1	0.487163
chr4	190075892	190075975	190075933	ENSG00000278393.1	+	miRNA	NOVEL	AC126281.8	1	1	0.487163
chr4	190077818	190079092	190078455	ENSG00000280799.1	+	unprocessed_pseudogene	KNOWN	DUX4L5	1	1	0.487163
chr4	190079185	190079268	190079226	ENSG00000273545.1	+	miRNA	NOVEL	AC126281.2	1	1	0.487163
chr4	190081118	190082386	190081752	ENSG00000258834.4	+	unprocessed_pseudogene	KNOWN	DUX4L4	1	1	0.487163
chr4	190082479	190082562	190082520	ENSG00000275922.1	+	miRNA	NOVEL	AC126281.5	1	1	0.487163
chr4	190084412	190085686	190085049	ENSG00000280757.1	+	unprocessed_pseudogene	KNOWN	DUX4L1	1	1	0.487163
chr4	190085779	190085862	190085820	ENSG00000277528.1	+	miRNA	NOVEL	AC126281.7	1	1	0.487163
chr4	190087705	190088979	190088342	ENSG00000281627.1	+	unprocessed_pseudogene	KNOWN	DUX4L3	1	1	0.487163
chr4	190089072	190089155	190089113	ENSG00000277451.1	+	miRNA	NOVEL	AC126281.6	1	1	0.487163
chr4	190091005	190092279	190091642	ENSG00000280457.1	+	unprocessed_pseudogene	KNOWN	DUX4L2	1	1	0.272282
chr4	190092372	190092455	190092413	ENSG00000275622.1	+	miRNA	NOVEL	AC126281.4	1	1	0.272282
chr4	190173774	190185942	190179858	ENSG00000260596.5	+	protein_coding	KNOWN	DUX4	6	4	0.016408
chr4	190175141	190175224	190175182	ENSG00000274222.1	+	miRNA	NOVEL	AC215524.1	1	1	0.016408
chr4	190195727	190196190	190195958	ENSG00000261914.2	+	processed_pseudogene	KNOWN	RPL23AP84	1	1	-0.025992
chr4	190195738	190195978	190195858	ENSG00000282994.1	-	processed_pseudogene	KNOWN	ABC7-42391500H16.4	1	1	-0.025992
chr4_GL000008v2_random	118091	118173	118132	ENSG00000274393.1	+	miRNA	NOVEL	AL583842.1	1	1	NA
chr4_GL000008v2_random	118284	118365	118324	ENSG00000275203.1	+	miRNA	NOVEL	AL583842.2	1	1	NA
chr4_GL000008v2_random	119196	119278	119237	ENSG00000277485.1	+	miRNA	NOVEL	AL583842.4	1	1	NA
chr4_GL000008v2_random	120628	120710	120669	ENSG00000278315.1	+	miRNA	NOVEL	AL583842.5	1	1	NA
chr4_GL000008v2_random	131853	131929	131891	ENSG00000277093.2	+	miRNA	NOVEL	AL583842.3	1	1	NA
chr5	58198	58915	58556	ENSG00000250020.1	+	processed_pseudogene	KNOWN	RP11-811I15.1	1	1	0.099811
chr5	92151	139863	116007	ENSG00000249430.1	+	lincRNA	KNOWN	CTD-2231H16.1	1	3	0.290030
chr5	140258	189970	165114	ENSG00000153404.13	+	protein_coding	KNOWN	PLEKHG4B	3	18	0.493708
chr5	144087	144197	144142	ENSG00000199540.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.013125
chr5	191511	195353	193432	ENSG00000185028.3	+	protein_coding	KNOWN	LRRC14B	1	2	0.883955
chr5	195778	196341	196059	ENSG00000261434.1	+	sense_overlapping	KNOWN	CTD-2083E4.7	1	1	0.883955
chr5	196871	218215	207543	ENSG00000164366.3	-	protein_coding	KNOWN	CCDC127	2	3	0.789849
chr5	213898	217279	215588	ENSG00000260774.1	-	processed_transcript	KNOWN	CTD-2083E4.4	1	2	0.639480
chr5	218241	256700	237470	ENSG00000073578.16	+	protein_coding	KNOWN	SDHA	20	15	0.464366
chr5	262769	262881	262825	ENSG00000277812.1	+	miRNA	NOVEL	AC021087.1	1	1	0.327281
chr5	269858	271516	270687	ENSG00000248925.1	-	antisense	KNOWN	CTD-2083E4.6	1	2	0.481225
chr5	271621	353856	312738	ENSG00000249915.7	+	protein_coding	KNOWN	PDCD6	14	7	0.601861
chr5	288833	290321	289577	ENSG00000250848.1	-	processed_pseudogene	KNOWN	CTD-2083E4.5	1	2	0.541507
chr5	304176	438291	371233	ENSG00000063438.16	+	protein_coding	KNOWN	AHRR	11	12	0.722848
chr5	403731	404546	404138	ENSG00000214278.4	-	processed_pseudogene	KNOWN	CTD-2228K2.2	1	1	0.848721
chr5	418703	419109	418906	ENSG00000250645.1	+	processed_pseudogene	KNOWN	CTD-2228K2.1	1	1	0.639025
chr5	441498	443160	442329	ENSG00000221990.4	-	antisense	KNOWN	EXOC3-AS1	2	1	0.928493
chr5	443158	471937	457547	ENSG00000180104.15	+	protein_coding	KNOWN	EXOC3	10	13	0.721575
chr5	466124	473098	469611	ENSG00000188242.4	-	antisense	KNOWN	PP7080	4	2	0.657672
chr5	473236	480884	477060	ENSG00000225138.7	+	processed_transcript	KNOWN	CTD-2228K2.7	7	7	0.658642
chr5	473310	524332	498821	ENSG00000066230.10	-	protein_coding	KNOWN	SLC9A3	3	17	0.844698
chr5	524705	526594	525649	ENSG00000250385.1	+	antisense	KNOWN	RP11-310P5.2	1	2	0.782036
chr5	535840	535882	535861	ENSG00000264233.1	-	miRNA	KNOWN	MIR4456	1	1	0.705575
chr5	602620	612210	607415	ENSG00000249650.1	-	antisense	KNOWN	RP11-310P5.1	1	3	0.376491
chr5	612272	667168	639720	ENSG00000112877.7	+	protein_coding	KNOWN	CEP72	4	12	0.698605
chr5	659862	693395	676628	ENSG00000171368.11	-	protein_coding	KNOWN	TPPP	1	4	0.751213
chr5	675826	676616	676221	ENSG00000271781.1	+	antisense	KNOWN	CTD-2589H19.6	1	1	0.810579
chr5	710360	766952	738656	ENSG00000206077.10	-	protein_coding	KNOWN	ZDHHC11B	4	11	0.382938
chr5	767382	768930	768156	ENSG00000249908.2	-	unprocessed_pseudogene	KNOWN	BRD9P2	1	2	0.538792
chr5	795606	850986	823296	ENSG00000188818.12	-	protein_coding	KNOWN	ZDHHC11	11	13	0.334589
chr5	816346	817001	816673	ENSG00000247872.2	+	processed_pseudogene	KNOWN	SPCS2P3	1	1	0.309745
chr5	850291	892824	871557	ENSG00000028310.17	-	protein_coding	KNOWN	BRD9	19	19	0.776454
chr5	892643	919357	906000	ENSG00000071539.13	+	protein_coding	KNOWN	TRIP13	7	13	0.467137
chr5	946315	956520	951417	ENSG00000248949.1	+	lincRNA	KNOWN	RP11-661C8.2	1	2	0.393150
chr5	979365	981300	980332	ENSG00000250173.1	+	lincRNA	KNOWN	RP11-661C8.3	1	2	0.593003
chr5	987180	997308	992244	ENSG00000215246.5	-	antisense	KNOWN	RP11-43F13.3	1	2	0.714086
chr5	1005039	1006623	1005831	ENSG00000272347.1	+	lincRNA	KNOWN	RP11-43F13.4	1	1	0.760786
chr5	1008829	1038943	1023886	ENSG00000145506.13	+	protein_coding	KNOWN	NKD2	5	11	0.558947
chr5	1050376	1112035	1081205	ENSG00000113504.20	-	protein_coding	KNOWN	SLC12A7	6	24	0.588010
chr5	1062896	1062974	1062935	ENSG00000263834.1	-	miRNA	KNOWN	MIR4635	1	1	0.569845
chr5	1173141	1178605	1175873	ENSG00000249201.2	-	antisense	KNOWN	CTD-3080P12.3	3	5	0.543866
chr5	1201595	1225117	1213356	ENSG00000174358.15	+	protein_coding	KNOWN	SLC6A19	2	12	0.877429
chr5	1225355	1246189	1235772	ENSG00000164363.9	+	protein_coding	KNOWN	SLC6A18	2	12	0.708046
chr5	1253147	1295069	1274108	ENSG00000164362.18	-	protein_coding	KNOWN	TERT	7	16	0.663170
chr5	1309310	1309377	1309343	ENSG00000263670.1	-	miRNA	KNOWN	MIR4457	1	1	0.657133
chr5	1317744	1345099	1331421	ENSG00000049656.13	-	protein_coding	KNOWN	CLPTM1L	16	17	0.577328
chr5	1363582	1380067	1371824	ENSG00000250584.2	-	lincRNA	KNOWN	LINC01511	3	2	0.341972
chr5	1370543	1370945	1370744	ENSG00000248951.2	-	processed_pseudogene	KNOWN	RP11-325I22.1	1	1	0.307929
chr5	1383159	1386409	1384784	ENSG00000279908.1	-	TEC	KNOWN	RP11-325I22.3	1	1	0.307929
chr5	1392790	1445430	1419110	ENSG00000142319.17	-	protein_coding	KNOWN	SLC6A3	3	15	0.547750
chr5	1456480	1523977	1490228	ENSG00000153395.9	-	protein_coding	KNOWN	LPCAT1	6	17	0.761315
chr5	1510762	1510856	1510809	ENSG00000273742.1	-	miRNA	KNOWN	MIR6075	1	1	0.865221
chr5	1544107	1551710	1547908	ENSG00000251532.1	-	lincRNA	KNOWN	CTD-2245E15.3	1	4	0.529188
chr5	1569421	1569533	1569477	ENSG00000278350.1	-	miRNA	NOVEL	AC091849.1	1	1	0.428041
chr5	1572222	1594620	1583421	ENSG00000185986.11	-	transcribed_unprocessed_pseudogene	KNOWN	SDHAP3	2	6	0.611069
chr5	1594626	1611467	1603046	ENSG00000271119.1	+	lincRNA	KNOWN	CTD-2012J19.3	1	3	0.293258
chr5	1598127	1598247	1598187	ENSG00000248126.1	+	unprocessed_pseudogene	KNOWN	CTD-2012J19.2	1	1	0.261086
chr5	1598920	1634005	1616462	ENSG00000188002.10	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-43F13.1	7	8	0.502563
chr5	1614836	1616334	1615585	ENSG00000232615.4	+	processed_pseudogene	KNOWN	CTD-2012J19.1	1	3	0.630160
chr5	1708785	1708868	1708826	ENSG00000263746.1	-	miRNA	KNOWN	MIR4277	1	1	0.174454
chr5	1725149	1728172	1726660	ENSG00000260066.1	+	lincRNA	KNOWN	CTD-2587M23.1	1	1	-0.023485
chr5	1798386	1801366	1799876	ENSG00000171421.12	-	protein_coding	KNOWN	MRPL36	5	2	0.424567
chr5	1801400	1816605	1809002	ENSG00000145494.11	+	protein_coding	KNOWN	NDUFS6	3	4	0.286074
chr5	1850950	1851497	1851223	ENSG00000249966.1	+	antisense	KNOWN	CTD-2194D22.1	1	2	0.353767
chr5	1855970	1856568	1856269	ENSG00000250417.1	-	lincRNA	KNOWN	CTD-2194D22.2	1	2	0.353767
chr5	1858409	1859890	1859149	ENSG00000279222.1	-	TEC	KNOWN	CTD-2194D22.5	1	1	0.353767
chr5	1877413	1887236	1882324	ENSG00000113430.9	-	protein_coding	KNOWN	IRX4	8	7	0.534836
chr5	1883966	1884649	1884307	ENSG00000249116.1	+	antisense	KNOWN	CTD-2194D22.3	1	2	0.534836
chr5	1887332	1900493	1893912	ENSG00000249326.1	+	antisense	KNOWN	CTD-2194D22.4	1	4	0.446514
chr5	1933863	1959176	1946519	ENSG00000248994.1	+	lincRNA	KNOWN	RP11-259O2.1	2	2	0.065072
chr5	1963609	1967154	1965381	ENSG00000248597.1	-	lincRNA	KNOWN	RP11-259O2.2	1	3	0.200516
chr5	1968094	1969013	1968553	ENSG00000249731.1	+	lincRNA	KNOWN	RP11-259O2.3	1	2	0.200516
chr5	2184710	2184820	2184765	ENSG00000201026.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.304295
chr5	2261859	2262023	2261941	ENSG00000275733.1	+	processed_pseudogene	KNOWN	RP11-24P24.1	1	1	0.121739
chr5	2712591	2715237	2713914	ENSG00000281560.1	+	lincRNA	KNOWN	LSINCT5	1	1	-0.022910
chr5	2736662	2737759	2737210	ENSG00000259757.1	-	lincRNA	KNOWN	RP11-129I19.2	1	2	0.031556
chr5	2745845	2751662	2748753	ENSG00000170561.12	-	protein_coding	KNOWN	IRX2	2	5	0.190940
chr5	2752131	2755397	2753764	ENSG00000186493.11	+	protein_coding	KNOWN	C5orf38	7	4	0.589065
chr5	2787451	2788549	2788000	ENSG00000249541.1	-	processed_pseudogene	KNOWN	RP11-692C23.1	1	1	-0.181656
chr5	2831021	2835139	2833080	ENSG00000248137.1	-	lincRNA	KNOWN	RP11-468D11.1	1	2	-0.340594
chr5	2965006	2967628	2966317	ENSG00000248736.1	+	lincRNA	KNOWN	RP11-35O7.1	1	2	-0.328714
chr5	3177835	3181232	3179533	ENSG00000249808.2	+	lincRNA	KNOWN	LINC01377	1	2	-0.377493
chr5	3417152	3536094	3476623	ENSG00000248118.1	-	lincRNA	KNOWN	LINC01019	1	5	-0.234604
chr5	3452816	3461660	3457238	ENSG00000249830.1	+	lincRNA	KNOWN	RP11-121L11.3	1	3	-0.014317
chr5	3496229	3504004	3500116	ENSG00000250716.1	-	lincRNA	KNOWN	LINC01017	1	3	-0.260680
chr5	3596054	3601403	3598728	ENSG00000170549.3	+	protein_coding	KNOWN	IRX1	1	4	0.375785
chr5	3596211	3600188	3598199	ENSG00000259603.1	-	antisense	KNOWN	CTD-2012M11.3	1	2	0.375785
chr5	3719695	3719789	3719742	ENSG00000280764.1	-	miRNA	NOVEL	AC091947.1	1	1	-0.295031
chr5	4012708	4013649	4013178	ENSG00000248962.1	-	lincRNA	KNOWN	CTD-2287N17.1	1	2	-0.053206
chr5	4033713	4041764	4037738	ENSG00000249994.1	-	lincRNA	KNOWN	CTD-2383I20.1	1	3	-0.084165
chr5	4135682	4143648	4139665	ENSG00000250921.1	+	lincRNA	KNOWN	CTD-2008N3.1	1	2	-0.017633
chr5	4436850	4440259	4438554	ENSG00000260763.1	-	lincRNA	KNOWN	RP11-445O3.3	1	2	-0.380597
chr5	4451930	4866221	4659075	ENSG00000248973.1	-	lincRNA	KNOWN	RP11-445O3.2	1	6	-0.372947
chr5	4512262	4516776	4514519	ENSG00000231291.3	+	lincRNA	KNOWN	RP11-445O3.1	1	2	-0.834008
chr5	4640731	4648254	4644492	ENSG00000251371.1	+	lincRNA	KNOWN	CTD-2318H23.1	1	2	-0.177615
chr5	4773481	4774865	4774173	ENSG00000249521.1	+	lincRNA	KNOWN	CTD-2161F6.3	1	2	-0.388813
chr5	4775476	4805769	4790622	ENSG00000248311.1	-	lincRNA	KNOWN	CTD-2161F6.2	1	2	-0.481793
chr5	4831699	4849800	4840749	ENSG00000248467.1	-	lincRNA	KNOWN	CTD-2161F6.1	1	2	-0.559001
chr5	4866521	4874759	4870640	ENSG00000249941.1	+	lincRNA	KNOWN	CTD-2046I8.1	1	3	-0.222851
chr5	4967764	4970425	4969094	ENSG00000251506.1	-	lincRNA	KNOWN	CTD-2247C11.2	1	3	0.168698
chr5	4974690	5034267	5004478	ENSG00000250481.1	-	lincRNA	KNOWN	CTD-2247C11.1	1	4	-0.074677
chr5	5034359	5070004	5052181	ENSG00000215231.7	+	lincRNA	KNOWN	LINC01020	4	8	-0.134200
chr5	5046796	5049497	5048146	ENSG00000251426.1	-	lincRNA	KNOWN	CTD-2247C11.4	2	2	-0.228049
chr5	5069192	5078311	5073751	ENSG00000250529.1	-	lincRNA	KNOWN	CTD-2247C11.5	1	2	0.057424
chr5	5126046	5126337	5126191	ENSG00000223007.1	+	misc_RNA	KNOWN	RN7SKP73	1	1	-0.144448
chr5	5132780	5140054	5136417	ENSG00000250579.1	-	antisense	KNOWN	CTD-2297D10.2	1	4	-0.177896
chr5	5140330	5320304	5230317	ENSG00000145536.15	+	protein_coding	KNOWN	ADAMTS16	4	23	-0.042556
chr5	5142138	5176214	5159176	ENSG00000250866.1	-	antisense	KNOWN	CTD-2297D10.1	1	2	-0.105789
chr5	5375723	5376836	5376279	ENSG00000251568.1	-	processed_pseudogene	KNOWN	ALG3P1	1	1	0.091992
chr5	5395378	5395957	5395667	ENSG00000248729.1	-	processed_pseudogene	KNOWN	MTCO1P30	1	1	0.028177
chr5	5395972	5396335	5396153	ENSG00000250808.1	-	processed_pseudogene	KNOWN	RP11-531A21.4	1	1	0.028177
chr5	5396477	5396968	5396722	ENSG00000251476.2	-	processed_pseudogene	KNOWN	MTCO1P31	1	1	0.028177
chr5	5420664	5490234	5455449	ENSG00000164151.11	+	protein_coding	KNOWN	ICE1	3	19	-0.008463
chr5	5515977	5516044	5516010	ENSG00000277333.1	-	miRNA	NOVEL	AC026799.1	1	1	0.236763
chr5	6019029	6022283	6020656	ENSG00000261037.1	-	lincRNA	KNOWN	CTC-471C19.1	1	1	-0.179813
chr5	6030035	6030841	6030438	ENSG00000259861.1	+	lincRNA	KNOWN	CTC-471C19.2	1	2	-0.327722
chr5	6112111	6112200	6112155	ENSG00000221568.1	+	miRNA	NOVEL	AC026797.1	1	1	-0.033539
chr5	6134303	6137171	6135737	ENSG00000278913.1	+	TEC	KNOWN	CTD-2299N12.1	1	1	-0.061020
chr5	6289857	6290624	6290240	ENSG00000250730.2	+	processed_pseudogene	KNOWN	HMGB3P3	1	2	-0.196521
chr5	6310441	6339884	6325162	ENSG00000250490.1	-	lincRNA	KNOWN	FLJ33360	2	2	0.022904
chr5	6371881	6378594	6375237	ENSG00000133398.3	-	protein_coding	KNOWN	MED10	3	4	0.136159
chr5	6448623	6494909	6471766	ENSG00000215218.3	+	protein_coding	KNOWN	UBE2QL1	1	2	0.133873
chr5	6532891	6533200	6533045	ENSG00000271230.1	-	processed_pseudogene	KNOWN	CTD-2195M18.2	1	1	0.027141
chr5	6582136	6588499	6585317	ENSG00000250056.5	+	lincRNA	KNOWN	LINC01018	4	5	0.337748
chr5	6599239	6633291	6616265	ENSG00000037474.14	-	protein_coding	KNOWN	NSUN2	9	19	0.253595
chr5	6633343	6674386	6653864	ENSG00000145545.11	+	protein_coding	KNOWN	SRD5A1	4	6	0.261758
chr5	6686325	6707711	6697018	ENSG00000248677.1	-	lincRNA	KNOWN	CTD-2044J15.1	2	3	-0.216589
chr5	6713007	6757048	6735027	ENSG00000112941.13	+	protein_coding	KNOWN	PAPD7	7	13	0.220275
chr5	6765891	6771953	6768922	ENSG00000251365.1	+	lincRNA	KNOWN	RP11-332J15.3	1	3	0.173266
chr5	6779458	6779998	6779728	ENSG00000272071.1	+	lincRNA	KNOWN	RP11-332J15.4	1	1	0.457987
chr5	6795880	6826728	6811304	ENSG00000249734.1	+	lincRNA	KNOWN	RP11-332J15.1	1	2	-0.090982
chr5	6848127	6848462	6848294	ENSG00000200243.1	-	misc_RNA	KNOWN	RN7SKP79	1	1	-0.126903
chr5	6868559	6886787	6877673	ENSG00000250060.1	+	lincRNA	KNOWN	RP11-332J15.2	1	3	-0.188172
chr5	6933670	7190812	7062241	ENSG00000250974.1	+	lincRNA	KNOWN	RP11-122F24.1	1	6	-0.275856
chr5	7047227	7047336	7047281	ENSG00000212258.1	+	rRNA	KNOWN	RNA5SP176	1	1	-0.306558
chr5	7239781	7240018	7239899	ENSG00000237611.2	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.160774
chr5	7287924	7288477	7288200	ENSG00000248775.1	-	processed_pseudogene	KNOWN	RP11-404K5.3	1	2	-0.380313
chr5	7290823	7296345	7293584	ENSG00000247732.2	+	unprocessed_pseudogene	KNOWN	RP11-404K5.1	1	2	-0.511781
chr5	7299774	7306592	7303183	ENSG00000205976.4	-	unprocessed_pseudogene	KNOWN	RP11-404K5.2	1	8	-0.511781
chr5	7326064	7326609	7326336	ENSG00000251250.1	+	lincRNA	KNOWN	RP11-404K5.4	1	2	0.187149
chr5	7344579	7345921	7345250	ENSG00000251678.1	+	lincRNA	KNOWN	CTD-2296D1.1	1	2	-0.142020
chr5	7346986	7347977	7347481	ENSG00000250668.1	-	lincRNA	KNOWN	CTD-2296D1.2	1	2	-0.142020
chr5	7362979	7364531	7363755	ENSG00000249638.1	-	lincRNA	KNOWN	CTD-2296D1.3	1	3	-0.260310
chr5	7367929	7373074	7370501	ENSG00000249865.1	-	antisense	KNOWN	CTD-2296D1.4	1	3	-0.655998
chr5	7373117	7379790	7376453	ENSG00000223597.2	+	lincRNA	KNOWN	CTD-2296D1.5	1	2	-0.922363
chr5	7396208	7830081	7613144	ENSG00000078295.15	+	protein_coding	KNOWN	ADCY2	9	27	-0.277972
chr5	7707802	7749766	7728784	ENSG00000250761.2	-	antisense	KNOWN	RP11-711G10.1	1	3	-0.336713
chr5	7830378	7851490	7840934	ENSG00000215217.6	-	protein_coding	KNOWN	C5orf49	2	3	0.002958
chr5	7851186	7906025	7878605	ENSG00000124275.14	+	protein_coding	KNOWN	MTRR	25	15	-0.219500
chr5	7859159	7869037	7864098	ENSG00000124279.11	-	protein_coding	KNOWN	FASTKD3	8	7	-0.054557
chr5	7924292	7925398	7924845	ENSG00000251168.1	+	lincRNA	KNOWN	CTD-2072I24.1	1	3	-0.041864
chr5	7980146	7980304	7980225	ENSG00000199773.1	+	snRNA	KNOWN	RNU1-76P	1	1	-0.273961
chr5	8080186	8080761	8080473	ENSG00000280338.1	-	TEC	KNOWN	RP11-334G8.1	1	1	-0.434376
chr5	8143618	8143784	8143701	ENSG00000280251.1	+	TEC	KNOWN	RP11-215I16.2	1	1	-0.165806
chr5	8157541	8157788	8157664	ENSG00000249486.1	-	unprocessed_pseudogene	KNOWN	RP11-215I16.1	1	1	-0.045512
chr5	8333481	8457558	8395519	ENSG00000245729.2	-	lincRNA	KNOWN	RP11-480D4.1	1	6	-0.251910
chr5	8387638	8457564	8422601	ENSG00000249159.6	-	lincRNA	KNOWN	RP11-480D4.2	2	5	-0.274029
chr5	8410789	8410996	8410892	ENSG00000251549.2	-	unprocessed_pseudogene	KNOWN	RP11-480D4.5	1	1	-0.417306
chr5	8444949	8445535	8445242	ENSG00000272049.1	-	lincRNA	KNOWN	RP11-480D4.6	1	1	-0.171043
chr5	8450743	8463095	8456919	ENSG00000247516.4	+	lincRNA	KNOWN	MIR4458HG	3	2	-0.451630
chr5	8455946	8456558	8456252	ENSG00000250037.1	-	unprocessed_pseudogene	KNOWN	RP11-480D4.4	1	1	-0.451630
chr5	8458842	8459183	8459012	ENSG00000279075.1	+	TEC	KNOWN	RP11-480D4.7	1	1	-0.451630
chr5	8460925	8460999	8460962	ENSG00000273868.1	+	miRNA	KNOWN	MIR4458	1	1	-0.451630
chr5	8525179	8528679	8526929	ENSG00000249782.1	+	lincRNA	KNOWN	RP11-417J1.1	1	2	-0.126354
chr5	8572047	8572206	8572126	ENSG00000279097.1	+	TEC	KNOWN	RP11-417J1.5	1	1	-0.296862
chr5	8614356	8614696	8614526	ENSG00000279264.1	+	TEC	KNOWN	RP11-417J1.6	1	1	-0.365357
chr5	8618581	8619104	8618842	ENSG00000250389.1	-	processed_pseudogene	KNOWN	MTND6P2	1	1	-0.365357
chr5	8619178	8620310	8619744	ENSG00000248765.1	+	processed_pseudogene	KNOWN	RP11-417J1.3	1	1	-0.365357
chr5	8659764	8660059	8659911	ENSG00000279002.1	-	TEC	KNOWN	RP11-417J1.7	1	1	-0.156445
chr5	8669018	8669250	8669134	ENSG00000280373.1	-	TEC	KNOWN	RP11-417J1.8	1	1	-0.156445
chr5	8685581	8685816	8685698	ENSG00000279125.1	-	TEC	KNOWN	RP11-417J1.4	1	1	-0.190151
chr5	8717684	8717883	8717783	ENSG00000280438.1	-	TEC	KNOWN	RP11-315A16.2	1	1	-0.380077
chr5	8754869	8755159	8755014	ENSG00000278877.1	+	TEC	KNOWN	RP11-315A16.3	1	1	-0.438523
chr5	8785042	8785468	8785255	ENSG00000260981.1	-	lincRNA	KNOWN	RP11-315A16.1	1	1	-0.194479
chr5	8793875	8794197	8794036	ENSG00000280185.1	+	TEC	KNOWN	RP11-315A16.4	1	1	-0.060960
chr5	8839732	8881525	8860628	ENSG00000250198.1	+	lincRNA	KNOWN	RP11-143A12.3	3	4	-0.009729
chr5	8949409	8949550	8949479	ENSG00000281755.1	+	miRNA	NOVEL	AC091895.1	1	1	-0.012978
chr5	8980404	8980659	8980531	ENSG00000279635.1	-	TEC	KNOWN	RP11-143A12.1	1	1	-0.220891
chr5	9001774	9045940	9023857	ENSG00000250619.1	+	antisense	KNOWN	CTD-2215L10.1	1	6	0.028358
chr5	9035026	9546075	9290550	ENSG00000112902.11	-	protein_coding	KNOWN	SEMA5A	4	23	0.091324
chr5	9053816	9053895	9053855	ENSG00000266415.1	-	miRNA	KNOWN	MIR4636	1	1	0.098535
chr5	9363275	9422481	9392878	ENSG00000248537.1	+	antisense	KNOWN	CTD-2201E9.4	1	4	0.162942
chr5	9498401	9498775	9498588	ENSG00000279698.1	-	TEC	KNOWN	CTD-2201E9.3	1	1	0.345207
chr5	9511333	9518086	9514709	ENSG00000251370.1	+	lincRNA	KNOWN	CTD-2201E9.1	1	3	0.091992
chr5	9519853	9523178	9521515	ENSG00000250001.1	-	sense_intronic	KNOWN	CTD-2201E9.2	1	2	0.091992
chr5	9546200	9550609	9548404	ENSG00000250786.1	+	lincRNA	KNOWN	SNHG18	2	3	0.024393
chr5	9548836	9548905	9548870	ENSG00000239112.1	+	snoRNA	KNOWN	SNORD123	1	1	-0.040203
chr5	9621377	9658458	9639917	ENSG00000248525.2	-	sense_overlapping	KNOWN	CTD-2001E22.1	1	3	-0.020647
chr5	9628997	9712378	9670687	ENSG00000169777.6	-	protein_coding	KNOWN	TAS2R1	3	3	0.032626
chr5	9641305	9903826	9772565	ENSG00000249781.6	-	lincRNA	KNOWN	CTD-2143L24.1	5	13	0.059178
chr5	9760907	9761013	9760960	ENSG00000222054.1	+	rRNA	KNOWN	RNA5SP177	1	1	0.013989
chr5	9854377	9889937	9872157	ENSG00000250814.1	+	lincRNA	KNOWN	RP11-447B18.1	1	2	0.025526
chr5	10057502	10057807	10057654	ENSG00000279011.1	+	TEC	KNOWN	RP11-191F9.4	1	1	0.001321
chr5	10064243	10064476	10064359	ENSG00000279755.1	-	TEC	KNOWN	RP11-191F9.2	1	1	0.001321
chr5	10070531	10070841	10070686	ENSG00000278874.1	+	TEC	KNOWN	RP11-191F9.3	1	1	-0.009888
chr5	10082571	10082772	10082671	ENSG00000280016.1	+	TEC	KNOWN	RP11-191F9.1	1	1	-0.009888
chr5	10137138	10138365	10137751	ENSG00000249807.1	+	lincRNA	KNOWN	CTD-2199O4.1	1	2	0.496746
chr5	10168783	10169006	10168894	ENSG00000280449.1	+	TEC	KNOWN	CTD-2199O4.4	1	1	0.219371
chr5	10171030	10171214	10171122	ENSG00000280368.1	-	TEC	KNOWN	CTD-2199O4.5	1	1	-0.140182
chr5	10195121	10197628	10196374	ENSG00000260515.1	-	lincRNA	KNOWN	CTD-2199O4.3	1	1	0.192103
chr5	10195187	10197622	10196404	ENSG00000271998.1	-	lincRNA	KNOWN	CTD-2199O4.7	1	1	0.192103
chr5	10203600	10204040	10203820	ENSG00000272417.1	-	lincRNA	KNOWN	CTD-2199O4.6	1	1	0.192103
chr5	10226330	10249897	10238113	ENSG00000150756.13	-	protein_coding	KNOWN	FAM173B	7	6	0.223372
chr5	10248325	10249915	10249120	ENSG00000248968.1	+	antisense	KNOWN	CTD-2256P15.1	1	2	0.255491
chr5	10249921	10266412	10258166	ENSG00000150753.11	+	protein_coding	KNOWN	CCT5	15	11	0.282618
chr5	10264597	10267146	10265871	ENSG00000271980.1	-	antisense	KNOWN	CTD-2256P15.4	1	1	0.282747
chr5	10269489	10269918	10269703	ENSG00000271715.1	-	lincRNA	KNOWN	CTD-2256P15.5	1	1	0.282747
chr5	10275875	10308026	10291950	ENSG00000164237.8	-	protein_coding	KNOWN	CMBL	7	6	0.495396
chr5	10292041	10292148	10292094	ENSG00000252341.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.528091
chr5	10337277	10337386	10337331	ENSG00000252671.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.483912
chr5	10342813	10343131	10342972	ENSG00000280369.1	+	TEC	KNOWN	CTD-2256P15.3	1	1	0.483912
chr5	10352701	10353601	10353151	ENSG00000259802.1	-	antisense	KNOWN	CTD-2256P15.2	1	1	0.179455
chr5	10353703	10440388	10397045	ENSG00000145495.14	+	protein_coding	KNOWN	MARCH6	14	26	0.192050
chr5	10353897	10353972	10353934	ENSG00000277064.1	+	miRNA	NOVEL	AC012640.1	1	1	0.179455
chr5	10441290	10441792	10441541	ENSG00000250600.1	-	antisense	KNOWN	ROPN1L-AS1	1	2	0.279415
chr5	10441524	10472029	10456776	ENSG00000145491.11	+	protein_coding	KNOWN	ROPN1L	5	6	0.342931
chr5	10478037	10478145	10478091	ENSG00000277073.1	+	miRNA	KNOWN	MIR6131	1	1	0.344110
chr5	10479371	10482309	10480840	ENSG00000246016.2	+	antisense	KNOWN	LINC01513	1	2	0.344110
chr5	10488820	10489142	10488981	ENSG00000244361.1	+	processed_pseudogene	KNOWN	RPL30P7	1	1	0.344110
chr5	10493291	10494094	10493692	ENSG00000249166.1	-	lincRNA	KNOWN	RP11-1C1.6	1	2	0.596336
chr5	10493527	10502728	10498127	ENSG00000249396.1	-	lincRNA	KNOWN	RP11-1C1.4	1	3	0.596336
chr5	10504996	10522084	10513540	ENSG00000249160.4	-	lincRNA	KNOWN	RP11-1C1.5	2	3	0.448606
chr5	10541454	10543192	10542323	ENSG00000280017.1	+	TEC	KNOWN	RP11-54F2.9	1	1	0.437127
chr5	10556582	10556815	10556698	ENSG00000279450.1	+	TEC	KNOWN	RP11-54F2.8	1	1	0.460960
chr5	10564330	10657816	10611073	ENSG00000164236.11	+	protein_coding	KNOWN	ANKRD33B	2	5	0.292672
chr5	10627260	10628225	10627742	ENSG00000250106.1	-	antisense	KNOWN	ANKRD33B-AS1	1	2	0.424068
chr5	10652211	10655925	10654068	ENSG00000251196.1	-	unprocessed_pseudogene	KNOWN	RP11-54F2.1	1	2	0.108386
chr5	10664495	10665113	10664804	ENSG00000251548.1	-	processed_pseudogene	KNOWN	RP11-215G15.4	1	1	0.108386
chr5	10675317	10675575	10675446	ENSG00000279979.1	-	TEC	KNOWN	CTD-2154B17.3	1	1	0.233348
chr5	10676096	10676423	10676259	ENSG00000278865.1	-	TEC	KNOWN	CTD-2154B17.2	1	1	0.233348
chr5	10679230	10761272	10720251	ENSG00000112977.15	-	protein_coding	KNOWN	DAP	6	4	0.406954
chr5	10761065	10770294	10765679	ENSG00000272324.5	+	antisense	KNOWN	CTD-2154B17.4	2	3	0.327331
chr5	10775058	10777062	10776060	ENSG00000250576.1	-	lincRNA	KNOWN	CTD-2154B17.1	1	2	0.423198
chr5	10971840	11904043	11437941	ENSG00000169862.18	-	protein_coding	KNOWN	CTNND2	17	22	-0.388272
chr5	11027200	11027307	11027253	ENSG00000207312.1	+	snRNA	KNOWN	RNU6-429P	1	1	-0.110693
chr5	12297399	12297504	12297451	ENSG00000212305.1	-	snRNA	KNOWN	RNU6-679P	1	1	-0.554776
chr5	12553890	12574637	12564263	ENSG00000248783.1	-	lincRNA	KNOWN	RP11-308B16.2	1	3	-0.366749
chr5	12574857	12804363	12689610	ENSG00000248131.5	+	lincRNA	KNOWN	LINC01194	3	4	-0.647431
chr5	12599623	12599700	12599661	ENSG00000264921.1	+	miRNA	NOVEL	AC106771.1	1	1	-0.684336
chr5	12794100	12794731	12794415	ENSG00000251112.2	-	processed_pseudogene	KNOWN	RP11-419C19.3	1	1	-0.679531
chr5	12794731	12795522	12795126	ENSG00000249053.1	+	processed_pseudogene	KNOWN	RP11-419C19.1	1	1	-0.679531
chr5	12914068	13032886	12973477	ENSG00000248457.1	-	lincRNA	KNOWN	RP11-419C19.2	1	3	-0.578317
chr5	13175846	13179572	13177709	ENSG00000248145.1	+	lincRNA	KNOWN	CTC-305H11.1	1	2	-0.666302
chr5	13250235	13250662	13250448	ENSG00000242608.1	-	processed_pseudogene	KNOWN	RPS23P5	1	1	-0.333538
chr5	13504347	13504477	13504412	ENSG00000281215.1	+	miRNA	NOVEL	AC010364.1	1	1	-0.247495
chr5	13553654	13553966	13553810	ENSG00000248462.1	-	processed_pseudogene	KNOWN	NENFP3	1	1	-0.363460
chr5	13637919	13638381	13638150	ENSG00000243744.2	-	processed_pseudogene	KNOWN	CTC-232H10.1	1	1	-0.065192
chr5	13690331	13944543	13817437	ENSG00000039139.9	-	protein_coding	KNOWN	DNAH5	4	79	-0.359275
chr5	13860338	13897771	13879054	ENSG00000251423.1	+	antisense	KNOWN	CTB-51A17.1	1	3	-0.135487
chr5	13919797	13919874	13919835	ENSG00000280702.1	-	miRNA	NOVEL	AC016576.1	1	1	-0.426040
chr5	14143702	14532128	14337915	ENSG00000038382.17	+	protein_coding	KNOWN	TRIO	24	57	0.378007
chr5	14341288	14343089	14342188	ENSG00000281325.1	+	protein_coding	KNOWN	AC016549.1	1	1	0.346233
chr5	14434723	14434815	14434769	ENSG00000275686.1	-	miRNA	NOVEL	AC016656.1	1	1	0.542244
chr5	14581775	14615007	14598391	ENSG00000145569.5	+	protein_coding	KNOWN	FAM105A	3	8	0.164928
chr5	14620020	14621313	14620666	ENSG00000248791.1	+	processed_pseudogene	KNOWN	CTD-2165H16.3	1	1	-0.110398
chr5	14639426	14641018	14640222	ENSG00000250526.1	-	processed_pseudogene	KNOWN	CCT6P2	1	1	-0.373983
chr5	14651941	14653329	14652635	ENSG00000250182.3	-	processed_pseudogene	KNOWN	EEF1A1P13	1	1	0.117083
chr5	14661808	14664604	14663206	ENSG00000261360.1	-	antisense	KNOWN	CTD-2165H16.4	3	3	0.117083
chr5	14664664	14699711	14682187	ENSG00000154124.4	+	protein_coding	KNOWN	OTULIN	6	7	0.057379
chr5	14704804	14871778	14788291	ENSG00000154122.12	-	protein_coding	KNOWN	ANKH	7	12	0.213571
chr5	14797125	14798400	14797762	ENSG00000249485.1	-	processed_pseudogene	KNOWN	RBBP4P1	1	1	0.076395
chr5	14825929	14826012	14825970	ENSG00000264792.1	-	miRNA	KNOWN	MIR4637	1	1	0.150206
chr5	14872332	14872713	14872522	ENSG00000272057.1	+	lincRNA	KNOWN	CTB-40H15.4	1	1	0.509549
chr5	14874400	14874711	14874555	ENSG00000249928.2	-	processed_pseudogene	KNOWN	UQCRBP3	1	1	0.509549
chr5	14877667	14877919	14877793	ENSG00000250662.1	-	processed_pseudogene	KNOWN	HNRNPKP5	1	1	0.509549
chr5	14910558	14910640	14910599	ENSG00000212036.2	-	miRNA	NOVEL	AC016575.1	1	1	0.186988
chr5	14960232	14961393	14960812	ENSG00000250247.1	+	processed_pseudogene	KNOWN	SEPHS2P1	1	1	0.107259
chr5	15110786	15110920	15110853	ENSG00000202269.1	-	snoRNA	NOVEL	U8	1	1	-0.299888
chr5	15112377	15117007	15114692	ENSG00000249332.1	-	lincRNA	KNOWN	RP1-251I12.1	1	3	-0.299888
chr5	15192139	15266541	15229340	ENSG00000248486.1	-	lincRNA	KNOWN	RP1-137K24.1	1	3	-0.336851
chr5	15384220	15384853	15384536	ENSG00000248834.2	+	processed_pseudogene	KNOWN	MARK2P5	1	1	-0.086345
chr5	15450701	15451811	15451256	ENSG00000248699.1	+	processed_pseudogene	KNOWN	CTD-2313D3.1	1	1	-0.154364
chr5	15500196	15939795	15719995	ENSG00000183580.9	+	protein_coding	KNOWN	FBXL7	3	4	-0.074895
chr5	15602189	15607348	15604768	ENSG00000250250.1	-	antisense	KNOWN	CTD-2350J17.1	2	2	-0.024066
chr5	15935159	15935272	15935215	ENSG00000216077.2	+	miRNA	KNOWN	MIR887	1	1	0.398831
chr5	16033229	16033356	16033292	ENSG00000222312.1	-	rRNA	KNOWN	RNA5SP178	1	1	-0.280426
chr5	16067139	16180762	16123950	ENSG00000183654.8	-	protein_coding	KNOWN	MARCH11	3	4	-0.355371
chr5	16129178	16141602	16135390	ENSG00000250981.1	+	antisense	KNOWN	RP11-19O2.1	1	2	-0.650480
chr5	16180238	16185585	16182911	ENSG00000250448.1	+	antisense	KNOWN	RP11-19O2.2	1	2	-0.595540
chr5	16192088	16192709	16192398	ENSG00000248403.1	-	processed_pseudogene	KNOWN	NACAP6	1	1	-0.247858
chr5	16373361	16440081	16406721	ENSG00000248150.1	-	lincRNA	KNOWN	RP1-167G20.1	1	8	-0.151888
chr5	16428536	16432436	16430486	ENSG00000249737.1	+	antisense	KNOWN	RP1-167G20.2	1	3	-0.007372
chr5	16451519	16465792	16458655	ENSG00000173545.4	-	protein_coding	KNOWN	ZNF622	1	6	0.175515
chr5	16473038	16617058	16545048	ENSG00000154153.13	-	protein_coding	KNOWN	FAM134B	6	9	-0.055484
chr5	16615926	16629969	16622947	ENSG00000246214.1	+	antisense	KNOWN	RP11-260E18.1	1	4	0.037544
chr5	16617225	16621276	16619250	ENSG00000250415.1	+	lincRNA	KNOWN	CTC-461F20.1	1	4	0.037544
chr5	16623004	16623095	16623049	ENSG00000201370.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.037544
chr5	16661914	16936276	16799095	ENSG00000145555.14	-	protein_coding	KNOWN	MYO10	12	41	0.328045
chr5	16853994	16854114	16854054	ENSG00000253093.1	+	rRNA	KNOWN	RNA5SP179	1	1	0.413920
chr5	16902294	16902641	16902467	ENSG00000243538.1	-	processed_pseudogene	KNOWN	RPS26P28	1	1	0.452492
chr5	16941843	16941951	16941897	ENSG00000201436.1	-	snRNA	KNOWN	RNU6-660P	1	1	0.591563
chr5	17065598	17276843	17171220	ENSG00000176788.8	+	protein_coding	KNOWN	BASP1	3	4	0.175490
chr5	17107360	17107789	17107574	ENSG00000271892.1	-	lincRNA	KNOWN	CTD-2228A4.1	1	1	0.408465
chr5	17117576	17117686	17117631	ENSG00000206814.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.068784
chr5	17130028	17217047	17173537	ENSG00000215196.4	-	antisense	KNOWN	AC091878.1	1	3	0.190147
chr5	17156971	17157071	17157021	ENSG00000251990.1	-	rRNA	KNOWN	RNA5SP180	1	1	0.221503
chr5	17202274	17203145	17202709	ENSG00000250816.1	+	processed_pseudogene	KNOWN	DCAF13P2	1	2	0.276416
chr5	17240611	17240715	17240663	ENSG00000252908.1	+	snRNA	KNOWN	RNU6-1003P	1	1	-0.037291
chr5	17306381	17306960	17306670	ENSG00000185296.8	+	processed_pseudogene	KNOWN	CTD-2139B15.1	1	1	-0.024150
chr5	17345616	17345955	17345785	ENSG00000201715.1	+	misc_RNA	KNOWN	RN7SKP133	1	1	-0.189640
chr5	17353695	17354624	17354159	ENSG00000223361.5	-	transcribed_processed_pseudogene	KNOWN	FTH1P10	2	1	-0.009704
chr5	17353910	17354899	17354404	ENSG00000248223.1	+	lincRNA	KNOWN	CTD-2139B15.2	1	2	-0.009704
chr5	17369225	17375577	17372401	ENSG00000249199.1	-	lincRNA	KNOWN	CTD-2139B15.5	1	2	0.085765
chr5	17378906	17387310	17383108	ENSG00000250822.1	-	lincRNA	KNOWN	CTD-2139B15.4	1	3	0.099012
chr5	17404019	17441694	17422856	ENSG00000248455.5	+	lincRNA	KNOWN	RP11-321E2.3	3	2	-0.088021
chr5	17444010	17483946	17463978	ENSG00000249662.5	+	lincRNA	KNOWN	RP11-321E2.4	2	3	-0.294742
chr5	17486231	17486825	17486528	ENSG00000251304.3	+	processed_pseudogene	KNOWN	RP11-321E2.5	1	1	-0.278571
chr5	17491361	17491769	17491565	ENSG00000268799.2	-	processed_pseudogene	KNOWN	RP11-321E2.13	1	1	-0.257244
chr5	17495658	17495826	17495742	ENSG00000250667.1	-	processed_pseudogene	KNOWN	RP11-321E2.12	1	1	-0.257244
chr5	17498231	17498825	17498528	ENSG00000185041.5	+	processed_pseudogene	KNOWN	RP11-321E2.6	1	1	-0.257244
chr5	17502043	17502363	17502203	ENSG00000248205.1	-	processed_pseudogene	KNOWN	RP11-321E2.11	1	1	-0.257244
chr5	17511833	17512238	17512035	ENSG00000249620.1	-	processed_pseudogene	KNOWN	RP11-321E2.10	1	1	-0.034920
chr5	17518366	17518960	17518663	ENSG00000248861.1	+	processed_pseudogene	KNOWN	RP11-321E2.2	1	1	-0.034920
chr5	17521801	17522395	17522098	ENSG00000249339.1	+	processed_pseudogene	KNOWN	RP11-321E2.7	1	1	-0.034920
chr5	17525235	17525829	17525532	ENSG00000250055.1	+	processed_pseudogene	KNOWN	RP11-321E2.8	1	1	-0.034920
chr5	17528669	17529263	17528966	ENSG00000250296.1	+	processed_pseudogene	KNOWN	RP11-321E2.9	1	1	-0.034920
chr5	17585162	17585758	17585460	ENSG00000250807.3	-	processed_pseudogene	KNOWN	RP11-432M8.2	1	1	0.000000
chr5	17587290	17587523	17587406	ENSG00000250088.1	-	processed_pseudogene	KNOWN	RP11-432M8.1	1	1	0.000000
chr5	17590364	17590960	17590662	ENSG00000250558.1	-	processed_pseudogene	KNOWN	RP11-432M8.3	1	1	0.202924
chr5	17593798	17594394	17594096	ENSG00000249427.1	-	processed_pseudogene	KNOWN	RP11-432M8.4	1	1	0.202924
chr5	17597232	17597828	17597530	ENSG00000249329.1	-	processed_pseudogene	KNOWN	RP11-432M8.5	1	1	0.202924
chr5	17598432	17598559	17598495	ENSG00000248422.1	-	processed_pseudogene	KNOWN	RP11-432M8.7	1	1	0.202924
chr5	17601882	17602134	17602008	ENSG00000249282.1	-	processed_pseudogene	KNOWN	RP11-432M8.6	1	1	0.202924
chr5	17604781	17605377	17605079	ENSG00000249357.3	+	processed_pseudogene	KNOWN	RP11-432M8.8	1	1	0.202924
chr5	17610990	17611583	17611286	ENSG00000249156.1	+	processed_pseudogene	KNOWN	RP11-432M8.9	1	1	-0.066706
chr5	17614781	17615111	17614946	ENSG00000271296.1	-	processed_pseudogene	KNOWN	RP11-432M8.20	1	1	-0.066706
chr5	17620533	17620939	17620736	ENSG00000250351.1	-	processed_pseudogene	KNOWN	RP11-432M8.10	1	1	-0.066706
chr5	17625551	17625959	17625755	ENSG00000250386.1	-	processed_pseudogene	KNOWN	RP11-432M8.11	1	1	-0.066706
chr5	17632088	17632683	17632385	ENSG00000249666.1	+	processed_pseudogene	KNOWN	RP11-432M8.12	1	1	-0.108921
chr5	17634460	17635053	17634756	ENSG00000250782.1	+	processed_pseudogene	KNOWN	RP11-432M8.13	1	1	-0.108921
chr5	17642962	17643228	17643095	ENSG00000248471.2	-	processed_pseudogene	KNOWN	RP11-432M8.15	1	1	-0.108921
chr5	17647712	17647944	17647828	ENSG00000248160.1	-	processed_pseudogene	KNOWN	RP11-432M8.14	1	1	-0.108921
chr5	17649046	17649643	17649344	ENSG00000248542.2	+	processed_pseudogene	KNOWN	RP11-432M8.16	1	1	-0.108921
chr5	17654373	17654643	17654508	ENSG00000248337.1	-	processed_pseudogene	KNOWN	RP11-432M8.18	1	1	-0.186473
chr5	17655129	17655538	17655333	ENSG00000269466.2	-	processed_pseudogene	KNOWN	RP11-432M8.17	1	1	-0.186473
chr5	17669283	17669518	17669400	ENSG00000274832.1	-	processed_pseudogene	KNOWN	RP11-432M8.21	1	1	-0.186473
chr5	17670168	17670571	17670369	ENSG00000250715.1	-	processed_pseudogene	KNOWN	RP11-432M8.19	1	1	-0.169449
chr5	17684584	17955857	17820220	ENSG00000249937.5	+	lincRNA	KNOWN	RP11-454P21.1	3	6	-0.425564
chr5	18049550	18049872	18049711	ENSG00000240785.1	+	processed_pseudogene	KNOWN	RPL36AP21	1	1	-0.397212
chr5	18236123	18236196	18236159	ENSG00000212278.1	+	snoRNA	NOVEL	SNORD81	1	1	-0.595540
chr5	18547312	18547605	18547458	ENSG00000241552.3	+	misc_RNA	KNOWN	RN7SL58P	1	1	-0.246331
chr5	18704433	18746173	18725303	ENSG00000248693.1	-	lincRNA	KNOWN	CTD-2023M8.1	1	2	-0.412260
chr5	18886622	18887095	18886858	ENSG00000249191.1	-	processed_pseudogene	KNOWN	UBE2V1P12	1	1	-0.801093
chr5	18893902	18894168	18894035	ENSG00000249927.1	-	processed_pseudogene	KNOWN	CTD-2151L9.2	1	1	-0.395274
chr5	18908866	18909543	18909204	ENSG00000249285.1	+	processed_pseudogene	KNOWN	RP11-81B23.1	1	1	-0.395274
chr5	18958147	18958413	18958280	ENSG00000276764.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.604939
chr5	18958153	18958237	18958195	ENSG00000281138.1	-	miRNA	NOVEL	AC114981.1	1	1	-0.604939
chr5	18965861	19142346	19054103	ENSG00000249174.1	-	lincRNA	KNOWN	RP11-124N3.3	1	2	-0.715681
chr5	19035197	19038799	19036998	ENSG00000251487.1	-	lincRNA	KNOWN	RP11-124N3.2	2	3	-0.709463
chr5	19041009	19041386	19041197	ENSG00000242654.1	+	processed_pseudogene	KNOWN	RPL32P14	1	1	-0.709463
chr5	19233366	19234487	19233926	ENSG00000249557.2	+	processed_pseudogene	KNOWN	HSPD1P15	1	1	-0.458561
chr5	19472951	20575873	20024412	ENSG00000145526.11	-	protein_coding	KNOWN	CDH18	12	15	-0.504915
chr5	19735510	19735561	19735535	ENSG00000264928.1	-	miRNA	NOVEL	AC118463.1	1	1	-0.492971
chr5	20158662	20158956	20158809	ENSG00000248766.2	-	processed_pseudogene	KNOWN	RP11-61K20.1	1	1	-0.819074
chr5	20304045	20305448	20304746	ENSG00000214132.4	-	processed_pseudogene	KNOWN	RP11-420O16.2	1	1	-0.628486
chr5	20305565	20331456	20318510	ENSG00000249854.1	+	lincRNA	KNOWN	RP11-420O16.1	1	2	-0.596057
chr5	20611840	20937691	20774765	ENSG00000251629.6	+	lincRNA	KNOWN	RP11-774D14.1	3	12	-0.434455
chr5	20612625	20614765	20613695	ENSG00000249490.1	-	lincRNA	KNOWN	CTD-2333M24.1	1	2	-0.652353
chr5	20830166	20830947	20830556	ENSG00000248308.1	-	processed_pseudogene	KNOWN	RP11-697E23.1	1	1	-0.326321
chr5	21196720	21196860	21196790	ENSG00000248286.1	+	processed_pseudogene	KNOWN	RP11-811J10.1	1	1	-0.336851
chr5	21323873	21341375	21332624	ENSG00000249359.2	-	lincRNA	KNOWN	RP11-374A4.1	1	3	-0.565873
chr5	21341833	21589372	21465602	ENSG00000183666.16	+	transcribed_unprocessed_pseudogene	KNOWN	GUSBP1	5	9	-0.313272
chr5	21481327	21484011	21482669	ENSG00000233974.3	-	processed_pseudogene	KNOWN	RP11-823P9.3	1	1	0.275214
chr5	21493436	21494596	21494016	ENSG00000279107.1	+	TEC	KNOWN	RP11-823P9.4	1	1	0.345142
chr5	21569755	21570045	21569900	ENSG00000272130.1	+	lincRNA	KNOWN	RP11-360I2.1	1	1	-0.353603
chr5	21616262	21779522	21697892	ENSG00000253766.1	+	antisense	KNOWN	RP11-804N13.1	1	4	-0.633448
chr5	21734211	21734304	21734257	ENSG00000221615.1	+	miRNA	NOVEL	AC140132.1	1	1	-0.552913
chr5	21750673	22853622	22302147	ENSG00000154162.13	-	protein_coding	KNOWN	CDH12	9	15	-0.535992
chr5	21882585	21884310	21883447	ENSG00000213430.6	+	processed_pseudogene	KNOWN	HSPD1P1	1	1	-0.471909
chr5	22139247	22141468	22140357	ENSG00000253104.1	-	sense_intronic	KNOWN	RP11-855C21.1	1	3	-0.497297
chr5	22142352	22152356	22147354	ENSG00000168967.14	+	transcribed_unprocessed_pseudogene	KNOWN	PMCHL1	4	4	-0.519500
chr5	22580225	22580819	22580522	ENSG00000249206.2	-	processed_pseudogene	KNOWN	GCNT1P2	1	1	-0.364184
chr5	23013048	23014527	23013787	ENSG00000249404.1	+	lincRNA	KNOWN	CTD-2234B20.1	1	2	-0.419722
chr5	23262159	23263185	23262672	ENSG00000250319.1	-	processed_pseudogene	KNOWN	CTD-2272G21.3	1	2	-0.635324
chr5	23299155	23299262	23299208	ENSG00000206912.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.764644
chr5	23303565	23305143	23304354	ENSG00000250332.1	-	processed_pseudogene	KNOWN	CTD-2272G21.2	1	1	-0.764644
chr5	23329427	23329892	23329659	ENSG00000249289.1	-	processed_pseudogene	KNOWN	CTD-2272G21.1	1	1	-0.615557
chr5	23443586	23528597	23486091	ENSG00000164256.10	+	protein_coding	KNOWN	PRDM9	3	11	-0.572188
chr5	23456468	23456850	23456659	ENSG00000248591.1	+	processed_pseudogene	KNOWN	CTD-2351A8.1	1	1	-0.876981
chr5	23688927	23689386	23689156	ENSG00000249607.1	+	processed_pseudogene	KNOWN	RP11-197O8.1	1	2	-0.701008
chr5	23951348	24178263	24064805	ENSG00000248874.5	+	lincRNA	KNOWN	C5orf17	2	5	-0.634904
chr5	23972188	23972294	23972241	ENSG00000252083.1	-	snoRNA	NOVEL	SNORA40	1	1	-1.089074
chr5	23980587	23980938	23980762	ENSG00000234865.3	+	transcribed_processed_pseudogene	KNOWN	CTD-2138O14.1	1	1	-1.089074
chr5	23994502	23994603	23994552	ENSG00000200600.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.506146
chr5	24170370	24171246	24170808	ENSG00000226432.3	+	processed_pseudogene	KNOWN	CTD-2015B23.2	1	1	-0.574964
chr5	24352309	24353443	24352876	ENSG00000250694.1	-	lincRNA	KNOWN	CTD-2074D8.1	1	2	-0.760451
chr5	24449351	24449615	24449483	ENSG00000277455.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.261118
chr5	24487100	24644978	24566039	ENSG00000040731.10	-	protein_coding	KNOWN	CDH10	4	12	-0.670041
chr5	24554018	24613222	24583620	ENSG00000251294.1	+	antisense	KNOWN	RP11-116O11.1	1	3	-0.809070
chr5	24578294	24578561	24578427	ENSG00000249562.1	-	processed_pseudogene	KNOWN	RP11-116O11.2	1	1	-0.768845
chr5	24749374	24749772	24749573	ENSG00000250099.1	-	processed_pseudogene	KNOWN	RP11-12P19.2	1	1	-0.253395
chr5	24786842	24787024	24786933	ENSG00000248156.2	-	processed_pseudogene	KNOWN	BTG4P1	1	1	-0.760666
chr5	24811481	24811548	24811514	ENSG00000223004.1	+	snoRNA	NOVEL	SNORD29	1	1	-0.516128
chr5	24835280	24840583	24837931	ENSG00000248908.1	-	lincRNA	KNOWN	RP11-730N24.1	1	3	-0.639519
chr5	24881943	24885461	24883702	ENSG00000250524.1	-	lincRNA	KNOWN	RP11-730N24.2	1	2	-0.715363
chr5	24910594	24910695	24910644	ENSG00000199911.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.987932
chr5	25126305	25190656	25158480	ENSG00000251273.1	-	lincRNA	KNOWN	RP11-549K20.1	1	5	-0.669135
chr5	25190682	25306172	25248427	ENSG00000245662.2	+	lincRNA	KNOWN	RP11-184E9.1	1	5	-0.607749
chr5	25218973	25298612	25258792	ENSG00000251654.2	-	lincRNA	KNOWN	RP11-192H6.2	1	5	-0.664060
chr5	25319834	25321346	25320590	ENSG00000260761.1	+	lincRNA	KNOWN	RP11-184E9.2	1	1	-0.313523
chr5	25349841	25350073	25349957	ENSG00000279671.1	+	TEC	KNOWN	RP11-184E9.3	1	1	-0.313392
chr5	25404733	25445925	25425329	ENSG00000248605.5	-	lincRNA	KNOWN	CTD-2306M5.1	3	3	-0.650408
chr5	25425412	25425599	25425505	ENSG00000279531.1	-	TEC	KNOWN	RP11-184E9.4	1	1	-0.538252
chr5	25701217	25701324	25701270	ENSG00000201016.1	-	snRNA	KNOWN	RNU6-374P	1	1	-0.818371
chr5	25716271	25716715	25716493	ENSG00000279869.1	+	TEC	KNOWN	CTD-2026A21.1	1	1	-0.768605
chr5	25909503	25911234	25910368	ENSG00000251593.1	+	processed_pseudogene	KNOWN	MSNP1	1	1	-0.670831
chr5	26012889	26013025	26012957	ENSG00000222560.1	+	snRNA	KNOWN	RNU4-43P	1	1	-0.691800
chr5	26382519	26399819	26391169	ENSG00000249099.1	-	lincRNA	KNOWN	RP11-351N6.1	1	5	-0.464791
chr5	26597022	26597131	26597076	ENSG00000277838.1	+	miRNA	NOVEL	AC026426.1	1	1	-0.879626
chr5	26669346	26669736	26669541	ENSG00000230571.2	+	processed_pseudogene	KNOWN	CTD-2533K21.3	1	1	-0.548012
chr5	26669711	26669989	26669850	ENSG00000248426.1	-	processed_pseudogene	KNOWN	CTD-2533K21.2	1	1	-0.548012
chr5	26670334	26670481	26670407	ENSG00000250703.1	-	processed_pseudogene	KNOWN	CTD-2533K21.1	1	1	-0.875587
chr5	26711551	26749997	26730774	ENSG00000251033.1	-	lincRNA	KNOWN	CTD-2533K21.4	1	3	-0.555446
chr5	26739753	26741183	26740468	ENSG00000249616.1	-	processed_pseudogene	KNOWN	CCNB3P1	1	1	-0.654889
chr5	26880600	27121150	27000875	ENSG00000113100.9	-	protein_coding	KNOWN	CDH9	5	12	-0.638197
chr5	27111569	27111674	27111621	ENSG00000207261.1	+	snRNA	KNOWN	RNU6-738P	1	1	-0.353808
chr5	27412613	27436411	27424512	ENSG00000248490.1	-	lincRNA	KNOWN	CTD-3007L5.1	1	4	-0.614849
chr5	27472292	27496401	27484346	ENSG00000250337.5	+	lincRNA	KNOWN	LINC01021	6	6	-0.516182
chr5	27986175	27986285	27986230	ENSG00000221721.1	-	miRNA	NOVEL	AC010455.1	1	1	-0.849456
chr5	28213359	28214559	28213959	ENSG00000250079.1	-	processed_pseudogene	KNOWN	RP11-560A7.1	1	1	-0.453442
chr5	28286389	28287665	28287027	ENSG00000249785.1	-	lincRNA	KNOWN	CTD-2061E9.1	1	2	-0.719742
chr5	28624657	28624763	28624710	ENSG00000252867.1	+	snRNA	KNOWN	RNU6-909P	1	1	-0.472272
chr5	28782678	28809249	28795963	ENSG00000250453.1	-	lincRNA	KNOWN	CTD-2134P3.1	1	2	-0.560528
chr5	28808538	28809255	28808896	ENSG00000270495.1	+	processed_pseudogene	KNOWN	CTD-2134P3.2	1	1	-0.503387
chr5	28897785	28898274	28898029	ENSG00000271035.1	-	processed_pseudogene	KNOWN	CTD-2269E23.3	1	1	-0.446428
chr5	28926816	28927023	28926919	ENSG00000162685.6	+	processed_pseudogene	KNOWN	LSP1P3	1	1	-0.584311
chr5	28927029	28927284	28927156	ENSG00000226400.2	+	processed_pseudogene	KNOWN	CTD-2269E23.2	1	1	-0.584311
chr5	28927298	28927459	28927378	ENSG00000277878.1	-	processed_pseudogene	KNOWN	CTD-2269E23.4	1	1	-0.584311
chr5	29001760	29003357	29002558	ENSG00000249226.1	+	processed_pseudogene	KNOWN	SUCLG2P4	1	2	-0.326413
chr5	29070496	29070610	29070553	ENSG00000252601.1	+	snoRNA	NOVEL	SNORA18	1	1	-0.555706
chr5	29104880	29105438	29105159	ENSG00000248687.2	+	unprocessed_pseudogene	KNOWN	RP11-42L13.2	1	2	-0.052957
chr5	29105568	29106861	29106214	ENSG00000270430.1	-	processed_pseudogene	KNOWN	RP11-42L13.3	1	1	-0.052957
chr5	29143503	29217115	29180309	ENSG00000259786.6	+	lincRNA	KNOWN	CTD-2118P12.1	6	9	-0.482301
chr5	29380296	29395981	29388138	ENSG00000248391.5	-	lincRNA	KNOWN	CTD-2010I22.2	2	5	-0.766405
chr5	29516005	29516504	29516254	ENSG00000276098.1	+	processed_pseudogene	KNOWN	CTD-2345H1.1	1	1	-0.536825
chr5	29600676	29600868	29600772	ENSG00000248418.2	+	processed_pseudogene	KNOWN	UBL5P1	1	1	-0.484358
chr5	29795938	29796268	29796103	ENSG00000250984.1	+	processed_pseudogene	KNOWN	CTD-2011G17.1	1	1	-0.407579
chr5	29848684	29849218	29848951	ENSG00000249744.1	-	processed_pseudogene	KNOWN	CTD-2057J6.2	1	1	-1.045512
chr5	29881709	29882945	29882327	ENSG00000233787.3	-	processed_pseudogene	KNOWN	CTD-2057J6.1	1	1	-0.451943
chr5	29948828	29949130	29948979	ENSG00000223136.1	+	misc_RNA	KNOWN	RN7SKP207	1	1	-0.436702
chr5	29979669	29983114	29981391	ENSG00000280305.1	+	TEC	KNOWN	CTD-2351A16.1	1	1	-0.425226
chr5	30152739	30152840	30152789	ENSG00000275925.1	+	miRNA	NOVEL	AC091856.1	1	1	-0.740898
chr5	30248350	30248893	30248621	ENSG00000250587.2	+	processed_pseudogene	KNOWN	HPRT1P2	1	1	-0.309749
chr5	30365405	30365684	30365544	ENSG00000250118.1	-	processed_pseudogene	KNOWN	RP11-136H13.2	1	1	-0.380077
chr5	31053565	31054153	31053859	ENSG00000241668.2	+	processed_pseudogene	KNOWN	RPL19P11	1	1	-0.477117
chr5	31065970	31066132	31066051	ENSG00000253940.1	-	processed_pseudogene	KNOWN	CTD-2127O16.2	1	1	-0.477117
chr5	31093977	31267610	31180793	ENSG00000254138.1	-	antisense	KNOWN	RP11-152K4.2	1	5	-0.172605
chr5	31193750	31329146	31261448	ENSG00000113361.12	+	protein_coding	KNOWN	CDH6	5	12	-0.217677
chr5	31249879	31250987	31250433	ENSG00000250482.3	+	processed_pseudogene	KNOWN	DUX4L51	1	1	-0.099375
chr5	31400497	31532196	31466346	ENSG00000113360.16	-	protein_coding	KNOWN	DROSHA	21	35	0.086107
chr5	31505684	31505788	31505736	ENSG00000206682.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.031871
chr5	31515382	31515525	31515453	ENSG00000281600.1	-	miRNA	NOVEL	AC106802.1	1	1	-0.183643
chr5	31532266	31555058	31543662	ENSG00000082213.17	+	protein_coding	KNOWN	C5orf22	10	9	0.032133
chr5	31558573	31559875	31559224	ENSG00000279923.1	+	TEC	KNOWN	CTD-2008E3.1	1	1	-0.116761
chr5	31595565	31595669	31595617	ENSG00000199765.1	-	snRNA	KNOWN	RNU6-363P	1	1	-0.130401
chr5	31639410	32110931	31875170	ENSG00000133401.15	+	protein_coding	KNOWN	PDZD2	12	25	0.093603
chr5	31657218	31665067	31661142	ENSG00000248624.1	+	sense_intronic	KNOWN	RP11-5N11.2	1	3	0.040593
chr5	31725539	31725902	31725720	ENSG00000248878.1	-	transcribed_processed_pseudogene	KNOWN	RP11-5N11.1	1	1	0.115451
chr5	31738269	31738660	31738464	ENSG00000249114.1	+	sense_intronic	KNOWN	RP11-5N11.3	1	1	0.021602
chr5	31741833	31742327	31742080	ENSG00000248813.1	-	lincRNA	KNOWN	RP11-5N11.4	1	1	0.021602
chr5	31743988	31744451	31744219	ENSG00000248378.1	-	lincRNA	KNOWN	RP11-5N11.5	1	1	0.021602
chr5	31747644	31748078	31747861	ENSG00000250164.1	-	lincRNA	KNOWN	RP11-5N11.6	1	1	0.021602
chr5	31754219	31754656	31754437	ENSG00000249688.1	+	sense_intronic	KNOWN	RP11-5N11.7	1	1	0.099334
chr5	31820564	31820638	31820601	ENSG00000252373.1	-	snRNA	KNOWN	RNU6-358P	1	1	0.218210
chr5	31822561	31823136	31822848	ENSG00000224282.3	-	processed_pseudogene	KNOWN	CTD-2290C23.1	1	1	0.218210
chr5	31832439	31832535	31832487	ENSG00000251887.2	+	snRNA	KNOWN	RNU6-760P	1	1	0.156122
chr5	31840492	31840971	31840731	ENSG00000241739.1	-	processed_pseudogene	KNOWN	CTD-2290C23.2	1	1	0.156122
chr5	31847271	31848148	31847709	ENSG00000243914.1	+	processed_pseudogene	KNOWN	RPL5P14	1	1	0.156122
chr5	31880035	31880084	31880059	ENSG00000265561.1	-	miRNA	NOVEL	AC025458.1	1	1	-0.082842
chr5	31908361	31909186	31908773	ENSG00000214108.4	+	processed_pseudogene	KNOWN	TPT1P5	1	2	0.162813
chr5	31923367	31923532	31923449	ENSG00000249774.1	+	processed_pseudogene	KNOWN	CTD-2206G10.2	1	1	0.323662
chr5	31936102	31936159	31936130	ENSG00000266243.1	-	miRNA	KNOWN	MIR4279	1	1	-0.062731
chr5	32103445	32121941	32112693	ENSG00000250764.1	-	antisense	KNOWN	CTD-2152M20.2	1	5	0.005184
chr5	32124704	32174350	32149527	ENSG00000113384.13	-	protein_coding	KNOWN	GOLPH3	3	4	0.134699
chr5	32134738	32134834	32134786	ENSG00000200065.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.203353
chr5	32174471	32175272	32174871	ENSG00000272086.1	+	lincRNA	KNOWN	CTD-2186M15.3	1	1	0.425416
chr5	32221932	32222347	32222139	ENSG00000230829.3	+	processed_pseudogene	KNOWN	CTD-2186M15.1	1	1	0.549762
chr5	32226994	32313009	32270001	ENSG00000150712.10	-	protein_coding	KNOWN	MTMR12	7	16	0.242364
chr5	32234766	32234875	32234820	ENSG00000199731.1	-	snRNA	KNOWN	RNU6-1079P	1	1	0.451988
chr5	32309662	32309768	32309715	ENSG00000207052.1	+	snRNA	KNOWN	RNU6-378P	1	1	0.154276
chr5	32354350	32444761	32399555	ENSG00000056097.15	-	protein_coding	KNOWN	ZFR	7	20	0.100261
chr5	32379407	32379467	32379437	ENSG00000222961.1	-	miRNA	NOVEL	AC008949.1	1	1	0.053311
chr5	32394378	32394475	32394426	ENSG00000207956.1	-	miRNA	KNOWN	MIR579	1	1	0.158663
chr5	32522758	32523865	32523311	ENSG00000249142.1	+	processed_pseudogene	KNOWN	CTD-2290P7.1	1	1	0.396846
chr5	32531633	32604079	32567856	ENSG00000113387.11	+	protein_coding	KNOWN	SUB1	13	6	0.303575
chr5	32646564	32651976	32649270	ENSG00000250885.1	-	lincRNA	KNOWN	CTD-2004A9.1	1	2	0.222796
chr5	32689070	32791724	32740397	ENSG00000113389.15	+	protein_coding	KNOWN	NPR3	7	8	0.137734
chr5	32781538	32781639	32781588	ENSG00000272174.1	+	miRNA	NOVEL	AC026703.1	1	1	0.388974
chr5	32887990	32888145	32888067	ENSG00000251062.1	-	processed_pseudogene	KNOWN	CTD-2218G20.1	1	1	-0.257815
chr5	32925639	33297910	33111774	ENSG00000250697.1	-	lincRNA	KNOWN	CTD-2066L21.3	3	3	0.004443
chr5	32947443	32962467	32954955	ENSG00000248279.5	+	lincRNA	KNOWN	CTD-2218G20.2	2	6	-0.085454
chr5	33008994	33025724	33017359	ENSG00000249102.1	+	lincRNA	KNOWN	CTD-2066L21.1	1	2	-0.052923
chr5	33011322	33017607	33014464	ENSG00000251281.1	-	lincRNA	KNOWN	CTD-2066L21.2	1	3	-0.054850
chr5	33090126	33090349	33090237	ENSG00000250672.1	-	processed_pseudogene	KNOWN	CTD-2017D15.1	1	1	-0.107946
chr5	33162179	33162807	33162493	ENSG00000240376.1	+	processed_pseudogene	KNOWN	RP11-36C20.1	1	1	-0.246331
chr5	33229735	33255553	33242644	ENSG00000251443.1	+	lincRNA	KNOWN	RP11-113I22.1	1	4	-0.007370
chr5	33424025	33440619	33432322	ENSG00000249572.1	-	antisense	KNOWN	CTD-2203K17.1	1	2	0.130063
chr5	33440696	33469539	33455117	ENSG00000113407.13	+	protein_coding	KNOWN	TARS	16	20	0.155376
chr5	33502072	33503135	33502603	ENSG00000249360.1	+	processed_pseudogene	KNOWN	CTD-2233C11.3	1	1	0.016704
chr5	33519616	33522230	33520923	ENSG00000250583.1	-	lincRNA	KNOWN	CTD-2233C11.2	1	2	0.105107
chr5	33523535	33892192	33707863	ENSG00000151388.10	-	protein_coding	KNOWN	ADAMTS12	6	24	0.185360
chr5	33888056	33888162	33888109	ENSG00000201623.1	-	snRNA	KNOWN	RNU6-923P	1	1	0.002355
chr5	33936386	33938237	33937311	ENSG00000182631.6	+	protein_coding	KNOWN	RXFP3	1	1	0.367270
chr5	33944616	33984730	33964673	ENSG00000164175.14	-	protein_coding	KNOWN	SLC45A2	5	7	0.060360
chr5	33970863	33972628	33971745	ENSG00000250914.1	+	processed_pseudogene	KNOWN	RP11-1084J3.1	1	2	-0.061631
chr5	33986178	34008108	33997143	ENSG00000242110.7	-	protein_coding	KNOWN	AMACR	9	6	-0.156241
chr5	33987174	34124528	34055851	ENSG00000273294.1	-	protein_coding	KNOWN	C1QTNF3-AMACR	1	9	-0.072911
chr5	33997044	33997724	33997384	ENSG00000250767.1	-	processed_pseudogene	KNOWN	RP11-1084J3.3	1	1	-0.176204
chr5	34019448	34043832	34031640	ENSG00000082196.20	-	protein_coding	KNOWN	C1QTNF3	6	6	0.120991
chr5	34105750	34106336	34106043	ENSG00000278900.1	-	TEC	KNOWN	RP11-1250I15.2	1	1	-0.345072
chr5	34124162	34124385	34124273	ENSG00000279995.1	-	TEC	KNOWN	RP11-1250I15.1	1	1	-0.263770
chr5	34158121	34158767	34158444	ENSG00000271771.1	+	lincRNA	KNOWN	RP11-1250I15.3	1	1	-0.233995
chr5	34164698	34244796	34204747	ENSG00000215158.9	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-1023L17.1	4	6	-0.138529
chr5	34190056	34193653	34191854	ENSG00000215156.5	+	processed_pseudogene	KNOWN	RP11-1023L17.2	1	1	0.384845
chr5	34373028	34373850	34373439	ENSG00000249380.1	+	processed_pseudogene	KNOWN	RP11-1325J9.1	1	1	-0.372514
chr5	34526154	34526301	34526227	ENSG00000275218.1	-	miRNA	NOVEL	AC114302.1	1	1	0.171162
chr5	34651457	34651888	34651672	ENSG00000271874.1	-	lincRNA	KNOWN	CTD-2024P10.2	1	1	0.536404
chr5	34656237	34832627	34744432	ENSG00000039560.13	+	protein_coding	KNOWN	RAI14	28	20	0.310287
chr5	34656412	34657250	34656831	ENSG00000250234.1	-	antisense	KNOWN	CTD-2024P10.1	1	2	0.536404
chr5	34837549	34839278	34838413	ENSG00000272323.1	-	antisense	KNOWN	CTD-2517O10.6	1	2	-0.048669
chr5	34838833	34899456	34869144	ENSG00000205838.12	+	protein_coding	KNOWN	TTC23L	8	11	-0.003477
chr5	34860783	34861506	34861144	ENSG00000250140.1	-	processed_pseudogene	KNOWN	CTD-2517O10.5	1	2	0.145573
chr5	34883057	34883520	34883288	ENSG00000241829.1	+	processed_pseudogene	KNOWN	RPL21P54	1	1	-0.141068
chr5	34905264	34918989	34912126	ENSG00000113456.18	-	protein_coding	KNOWN	RAD1	8	9	0.220415
chr5	34915376	34925996	34920686	ENSG00000113460.12	+	protein_coding	KNOWN	BRIX1	5	10	0.322997
chr5	34929593	34958964	34944278	ENSG00000168724.14	+	protein_coding	KNOWN	DNAJC21	6	13	0.111077
chr5	34998101	35048135	35023118	ENSG00000113492.13	-	protein_coding	KNOWN	AGXT2	6	14	0.019390
chr5	35034152	35034242	35034197	ENSG00000280468.1	+	miRNA	NOVEL	AC010368.1	1	1	-0.156396
chr5	35048756	35230589	35139672	ENSG00000113494.16	-	protein_coding	KNOWN	PRLR	20	10	0.014797
chr5	35081223	35081992	35081607	ENSG00000250886.1	+	processed_pseudogene	KNOWN	CTD-2046J7.1	1	2	-0.175630
chr5	35331709	35331831	35331770	ENSG00000281247.1	+	miRNA	NOVEL	AC027347.1	1	1	-0.356154
chr5	35429064	35429277	35429170	ENSG00000201368.2	+	snoRNA	NOVEL	U3	1	1	-0.789745
chr5	35617844	35814611	35716227	ENSG00000152582.12	+	protein_coding	KNOWN	SPEF2	14	37	-0.242895
chr5	35632963	35633024	35632993	ENSG00000238441.1	-	snRNA	KNOWN	RNU7-130P	1	1	-0.462320
chr5	35678484	35827018	35752751	ENSG00000248969.1	-	antisense	KNOWN	CTD-2113L7.1	1	4	-0.212496
chr5	35852695	35879603	35866149	ENSG00000168685.14	+	protein_coding	KNOWN	IL7R	10	8	-0.183567
chr5	35895689	35896020	35895854	ENSG00000279737.1	-	TEC	KNOWN	RP11-79C6.2	1	1	0.253743
chr5	35896188	35896290	35896239	ENSG00000248349.1	-	processed_pseudogene	KNOWN	RP11-79C6.1	1	1	0.253743
chr5	35904295	35938779	35921537	ENSG00000152611.11	-	protein_coding	KNOWN	CAPSL	4	5	0.054318
chr5	35938822	35939993	35939407	ENSG00000249748.1	+	antisense	KNOWN	RP11-79C6.3	1	2	-0.022872
chr5	35951010	36001028	35976019	ENSG00000145626.11	-	protein_coding	KNOWN	UGT3A1	7	8	-0.259267
chr5	36035017	36071358	36053187	ENSG00000168671.9	-	protein_coding	KNOWN	UGT3A2	5	7	-0.195368
chr5	36071791	36072079	36071935	ENSG00000251591.2	-	processed_pseudogene	KNOWN	CTD-2197M16.1	1	1	0.019641
chr5	36098412	36151961	36125186	ENSG00000164187.6	-	protein_coding	KNOWN	LMBRD2	3	18	-0.412232
chr5	36147892	36147988	36147940	ENSG00000207756.1	-	miRNA	KNOWN	MIR580	1	1	-0.412051
chr5	36151989	36184319	36168154	ENSG00000145604.15	+	protein_coding	KNOWN	SKP2	9	11	0.174463
chr5	36155119	36155222	36155170	ENSG00000201223.1	+	snRNA	KNOWN	RNU6-1305P	1	1	0.333000
chr5	36192592	36242279	36217435	ENSG00000152620.12	-	protein_coding	KNOWN	NADK2	11	13	-0.192225
chr5	36221055	36221902	36221478	ENSG00000245711.2	+	antisense	KNOWN	NADK2-AS1	1	2	-0.133568
chr5	36248434	36302114	36275274	ENSG00000164188.8	-	protein_coding	KNOWN	RANBP3L	4	15	-0.244920
chr5	36485343	36485440	36485391	ENSG00000222178.1	+	rRNA	KNOWN	RNA5SP181	1	1	-0.352572
chr5	36588506	36588661	36588583	ENSG00000242292.2	+	processed_pseudogene	KNOWN	CTD-2282P23.1	1	1	-0.125037
chr5	36606355	36688334	36647344	ENSG00000079215.13	+	protein_coding	KNOWN	SLC1A3	16	10	-0.205918
chr5	36636019	36649347	36642683	ENSG00000274441.1	-	antisense	KNOWN	CTD-2282P23.2	1	3	-0.127789
chr5	36666214	36725195	36695704	ENSG00000250155.1	-	antisense	KNOWN	CTD-2353F22.1	3	3	-0.051015
chr5	36667717	36669958	36668837	ENSG00000279400.1	+	TEC	KNOWN	CTD-2353F22.2	1	1	0.150885
chr5	36861736	36862217	36861976	ENSG00000272103.1	-	lincRNA	KNOWN	CTD-2653M23.3	1	1	-0.323046
chr5	36876759	37066413	36971586	ENSG00000164190.16	+	protein_coding	KNOWN	NIPBL	9	47	-0.135608
chr5	36885206	36886497	36885851	ENSG00000249850.1	+	processed_pseudogene	KNOWN	KRT18P31	1	1	-0.496637
chr5	37085056	37085852	37085454	ENSG00000244073.1	+	processed_pseudogene	KNOWN	RPS4XP6	1	1	0.401774
chr5	37106228	37249428	37177828	ENSG00000197603.13	-	protein_coding	KNOWN	C5orf42	15	52	0.050533
chr5	37130430	37130700	37130565	ENSG00000271378.1	+	processed_pseudogene	KNOWN	C8orf59P2	1	1	0.217523
chr5	37209364	37212381	37210872	ENSG00000228212.1	+	processed_pseudogene	KNOWN	OFD1P17	1	1	0.027374
chr5	37246173	37246479	37246326	ENSG00000242493.3	-	misc_RNA	KNOWN	RN7SL37P	1	1	-0.035013
chr5	37286449	37286977	37286713	ENSG00000270558.1	-	processed_pseudogene	KNOWN	CTD-2124B8.2	1	1	0.356492
chr5	37288137	37371181	37329659	ENSG00000113569.15	-	protein_coding	KNOWN	NUP155	8	35	0.136783
chr5	37327135	37327196	37327165	ENSG00000251880.1	+	snRNA	KNOWN	RNU7-75P	1	1	0.074290
chr5	37377049	37377971	37377510	ENSG00000250455.1	+	unprocessed_pseudogene	KNOWN	RP11-648M2.1	1	2	0.229495
chr5	37379212	37753435	37566323	ENSG00000082068.8	+	protein_coding	KNOWN	WDR70	7	18	0.099874
chr5	37505688	37506857	37506272	ENSG00000248216.1	-	processed_pseudogene	KNOWN	KCTD9P5	1	1	0.357803
chr5	37619985	37620088	37620036	ENSG00000222743.1	-	snRNA	KNOWN	RNU6-1190P	1	1	0.091992
chr5	37700331	37700437	37700384	ENSG00000206743.1	-	snRNA	KNOWN	RNU6-484P	1	1	0.057844
chr5	37795289	37795399	37795344	ENSG00000275899.1	+	miRNA	NOVEL	AC008869.1	1	1	0.260192
chr5	37812677	37839686	37826181	ENSG00000168621.14	-	protein_coding	KNOWN	GDNF	8	3	0.101310
chr5	37840438	37875799	37858118	ENSG00000248587.6	+	lincRNA	KNOWN	GDNF-AS1	3	4	-0.009087
chr5	37888249	37888350	37888299	ENSG00000278179.1	-	miRNA	NOVEL	AC008869.2	1	1	0.275789
chr5	37899363	37920869	37910116	ENSG00000248539.1	-	lincRNA	KNOWN	CTD-2194L12.2	1	4	-0.002075
chr5	37939365	37947955	37943660	ENSG00000250032.1	-	lincRNA	KNOWN	CTD-2194L12.3	1	2	-0.018712
chr5	37948491	37951055	37949773	ENSG00000251518.1	+	lincRNA	KNOWN	CTD-2130F23.2	1	2	-0.067736
chr5	37953402	37966964	37960183	ENSG00000248533.1	+	lincRNA	KNOWN	CTD-2130F23.1	1	2	-0.137743
chr5	38025697	38183932	38104814	ENSG00000250003.2	+	lincRNA	KNOWN	CTD-2116N24.1	1	3	-0.231358
chr5	38081672	38081743	38081707	ENSG00000238836.1	-	miRNA	NOVEL	AC074129.1	1	1	-0.335962
chr5	38148480	38153715	38151097	ENSG00000248461.1	+	lincRNA	KNOWN	CTD-2207A17.1	1	2	-0.355172
chr5	38197432	38198148	38197790	ENSG00000276332.1	+	processed_pseudogene	KNOWN	CTD-2007F2.1	1	1	0.211952
chr5	38258409	38465021	38361715	ENSG00000164318.17	+	protein_coding	KNOWN	EGFLAM	11	23	-0.089931
chr5	38282264	38290986	38286625	ENSG00000248730.1	-	antisense	KNOWN	EGFLAM-AS4	1	4	-0.410235
chr5	38345347	38346551	38345949	ENSG00000249071.2	-	antisense	KNOWN	EGFLAM-AS3	1	2	-0.053549
chr5	38399814	38403413	38401613	ENSG00000248572.5	-	antisense	KNOWN	EGFLAM-AS2	2	3	-0.122452
chr5	38425036	38427376	38426206	ENSG00000249491.1	-	antisense	KNOWN	EGFLAM-AS1	1	2	-0.251707
chr5	38429892	38430160	38430026	ENSG00000248234.1	-	processed_pseudogene	KNOWN	CTD-2108O9.4	1	1	-0.040482
chr5	38460925	38468339	38464632	ENSG00000251257.2	-	antisense	KNOWN	CTD-2263F21.1	2	2	0.122049
chr5	38474963	38608354	38541658	ENSG00000113594.9	-	protein_coding	KNOWN	LIFR	9	20	-0.099426
chr5	38556786	38671216	38614001	ENSG00000244968.6	+	antisense	KNOWN	LIFR-AS1	3	9	-0.126853
chr5	38557502	38557561	38557531	ENSG00000265304.1	-	miRNA	KNOWN	MIR3650	1	1	-0.111292
chr5	38682070	38685126	38683598	ENSG00000251189.1	+	lincRNA	KNOWN	CTD-2196P11.2	1	2	-0.198350
chr5	38710367	38720273	38715320	ENSG00000249911.1	-	lincRNA	KNOWN	LINC01265	1	5	-0.539621
chr5	38736055	38845829	38790942	ENSG00000249740.1	-	lincRNA	KNOWN	OSMR-AS1	2	4	-0.213977
chr5	38763158	38764289	38763723	ENSG00000248577.1	-	processed_pseudogene	KNOWN	RP11-122C5.2	1	2	-0.167875
chr5	38783580	38792754	38788167	ENSG00000250629.1	+	antisense	KNOWN	RP11-122C5.3	1	2	-0.361399
chr5	38845858	38945596	38895727	ENSG00000145623.12	+	protein_coding	KNOWN	OSMR	5	18	0.166281
chr5	38937919	39074408	39006163	ENSG00000164327.12	-	protein_coding	KNOWN	RICTOR	10	39	-0.057807
chr5	39022411	39022558	39022484	ENSG00000249089.1	+	unprocessed_pseudogene	KNOWN	AIG1P1	1	1	0.370094
chr5	39105236	39274528	39189882	ENSG00000082074.15	-	protein_coding	KNOWN	FYB	10	19	-0.000445
chr5	39141628	39141724	39141676	ENSG00000277910.1	+	miRNA	NOVEL	AC010633.1	1	1	-0.225349
chr5	39169210	39170335	39169772	ENSG00000251215.1	-	processed_pseudogene	KNOWN	GOLGA5P1	1	2	0.121236
chr5	39284262	39424868	39354565	ENSG00000113600.10	-	protein_coding	KNOWN	C9	4	11	-0.132348
chr5	39371675	39462300	39416987	ENSG00000153071.14	-	protein_coding	KNOWN	DAB2	17	15	0.129974
chr5	39520431	39524708	39522569	ENSG00000271334.5	+	lincRNA	KNOWN	CTD-2078B5.2	2	3	0.082773
chr5	39571478	39572639	39572058	ENSG00000251515.1	-	processed_pseudogene	KNOWN	CCDC11P1	1	1	-0.331220
chr5	39718984	39721513	39720248	ENSG00000250492.1	-	processed_pseudogene	KNOWN	INTS6P1	1	1	-0.234819
chr5	39888576	39889059	39888817	ENSG00000248651.1	-	processed_pseudogene	KNOWN	GCSHP1	1	1	-0.316648
chr5	40052291	40053324	40052807	ENSG00000250048.1	+	lincRNA	KNOWN	LINC00603	1	2	-0.634724
chr5	40066651	40067200	40066925	ENSG00000249668.1	+	processed_pseudogene	KNOWN	KRT18P56	1	1	-0.634724
chr5	40260657	40267657	40264157	ENSG00000250585.1	+	lincRNA	KNOWN	LINC00604	1	2	-0.475693
chr5	40269558	40269719	40269638	ENSG00000199361.1	+	snRNA	KNOWN	RNU1-150P	1	1	-0.475693
chr5	40320318	40320415	40320366	ENSG00000265615.1	+	miRNA	NOVEL	AC108105.1	1	1	-0.152161
chr5	40654963	40655094	40655028	ENSG00000199552.1	+	snoRNA	NOVEL	SNORA63	1	1	0.083275
chr5	40679498	40693735	40686616	ENSG00000171522.5	+	protein_coding	KNOWN	PTGER4	5	3	-0.211911
chr5	40714475	40755975	40735225	ENSG00000113638.12	-	protein_coding	KNOWN	TTC33	4	5	-0.073803
chr5	40759379	40798374	40778876	ENSG00000132356.11	-	protein_coding	KNOWN	PRKAA1	9	10	0.126621
chr5	40790077	40790204	40790140	ENSG00000212567.1	-	snoRNA	NOVEL	SNORA57	1	1	0.251568
chr5	40801222	40801596	40801409	ENSG00000279126.1	-	protein_coding	KNOWN	AC008810.1	1	1	0.251568
chr5	40825262	40835335	40830298	ENSG00000145592.13	-	protein_coding	KNOWN	RPL37	6	4	0.327357
chr5	40832656	40832735	40832695	ENSG00000212296.1	-	snoRNA	KNOWN	SNORD72	1	1	0.384599
chr5	40841184	40860175	40850679	ENSG00000132357.13	+	protein_coding	KNOWN	CARD6	2	3	0.223053
chr5	40909252	40982939	40946095	ENSG00000112936.18	+	protein_coding	KNOWN	C7	7	18	-0.254685
chr5	40911067	40911128	40911097	ENSG00000253098.1	-	snRNA	KNOWN	RNU7-161P	1	1	-0.167767
chr5	40967505	40967763	40967634	ENSG00000248120.1	-	processed_pseudogene	KNOWN	RP11-301A5.2	1	1	-0.212402
chr5	40998017	41071342	41034679	ENSG00000171495.16	-	protein_coding	KNOWN	MROH2B	6	42	-0.260796
chr5	41142234	41261438	41201836	ENSG00000039537.13	-	protein_coding	KNOWN	C6	8	18	-0.263485
chr5	41306954	41510628	41408791	ENSG00000182836.9	-	protein_coding	KNOWN	PLCXD3	2	4	-0.249157
chr5	41585882	41587787	41586834	ENSG00000251478.1	-	processed_pseudogene	KNOWN	CTD-2122P11.1	1	2	-0.682632
chr5	41730065	41870519	41800292	ENSG00000083720.12	-	protein_coding	KNOWN	OXCT1	8	17	-0.282169
chr5	41870030	41872241	41871135	ENSG00000248668.2	+	processed_transcript	KNOWN	OXCT1-AS1	2	3	-0.193680
chr5	41895068	41895599	41895333	ENSG00000240281.2	+	processed_pseudogene	KNOWN	CTD-2062O1.1	1	1	-0.675031
chr5	41904188	41921636	41912912	ENSG00000205765.8	+	protein_coding	KNOWN	C5orf51	4	6	-0.323621
chr5	41925254	41941743	41933498	ENSG00000151876.12	+	protein_coding	KNOWN	FBXO4	7	7	-0.090287
chr5	41951313	41952193	41951753	ENSG00000239694.1	-	processed_pseudogene	KNOWN	RPSAP38	1	1	0.072626
chr5	41963868	41963969	41963918	ENSG00000199487.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.072626
chr5	41967139	41968366	41967752	ENSG00000249266.1	-	processed_pseudogene	KNOWN	MTHFD2P6	1	2	0.072626
chr5	42188266	42191523	42189894	ENSG00000260786.1	+	lincRNA	KNOWN	RP11-112L7.1	1	1	-0.427204
chr5	42423777	42721878	42572827	ENSG00000112964.13	+	protein_coding	KNOWN	GHR	13	11	-0.345681
chr5	42465400	42468868	42467134	ENSG00000248873.1	-	processed_pseudogene	KNOWN	SERBP1P6	1	2	-0.169336
chr5	42466893	42468300	42467596	ENSG00000250860.1	-	processed_pseudogene	KNOWN	CTD-2265D6.2	1	1	-0.169336
chr5	42729138	42729519	42729328	ENSG00000270513.1	+	processed_pseudogene	KNOWN	RP11-116B13.1	1	1	-0.717402
chr5	42756801	42802360	42779580	ENSG00000198865.9	+	protein_coding	KNOWN	CCDC152	2	9	-0.530272
chr5	42799880	42887392	42843636	ENSG00000250722.5	-	protein_coding	KNOWN	SEPP1	15	6	-0.365321
chr5	42806394	42806997	42806695	ENSG00000272234.1	+	antisense	KNOWN	CTD-2325A15.5	1	1	-0.488783
chr5	42892319	42892817	42892568	ENSG00000249092.1	-	processed_pseudogene	KNOWN	CTD-2325A15.3	1	1	-0.098339
chr5	42897262	42897832	42897547	ENSG00000251163.1	-	processed_pseudogene	KNOWN	PRELID3BP4	1	1	-0.098339
chr5	42908208	42908667	42908437	ENSG00000251656.1	-	processed_pseudogene	KNOWN	PRELID3BP5	1	1	-0.098339
chr5	42917414	42917984	42917699	ENSG00000249516.1	+	processed_pseudogene	KNOWN	PRELID3BP6	1	1	-0.258695
chr5	42972624	42973092	42972858	ENSG00000250711.1	+	processed_pseudogene	KNOWN	PRELID3BP7	1	1	0.222494
chr5	43006733	43007543	43007138	ENSG00000271788.1	-	lincRNA	KNOWN	CTD-2201E18.5	1	1	0.245797
chr5	43014414	43067419	43040916	ENSG00000177738.3	-	sense_overlapping	KNOWN	CTD-2201E18.3	3	3	0.187706
chr5	43018429	43024247	43021338	ENSG00000251131.1	+	antisense	KNOWN	CTD-2035E11.3	2	3	0.107589
chr5	43033716	43034635	43034175	ENSG00000272382.1	+	lincRNA	KNOWN	CTD-2035E11.4	1	1	0.228728
chr5	43039081	43043170	43041125	ENSG00000177721.4	-	protein_coding	KNOWN	ANXA2R	2	2	0.228728
chr5	43041575	43045390	43043482	ENSG00000215068.7	+	antisense	KNOWN	AC025171.1	5	3	0.228728
chr5	43061395	43062441	43061918	ENSG00000272144.1	+	lincRNA	KNOWN	CTD-2035E11.5	1	1	0.212286
chr5	43065176	43192021	43128598	ENSG00000172262.11	+	protein_coding	KNOWN	ZNF131	20	8	0.229043
chr5	43143362	43143514	43143438	ENSG00000278487.1	-	processed_pseudogene	KNOWN	RP11-447H19.4	1	1	0.189839
chr5	43192071	43280850	43236460	ENSG00000177453.7	+	protein_coding	KNOWN	NIM1K	5	4	-0.052589
chr5	43206709	43207811	43207260	ENSG00000249779.1	+	processed_pseudogene	KNOWN	RP11-447H19.3	1	1	0.461565
chr5	43225506	43225813	43225659	ENSG00000249888.1	-	processed_pseudogene	KNOWN	RP11-447H19.2	1	1	-0.127974
chr5	43231812	43233173	43232492	ENSG00000247763.2	-	processed_pseudogene	KNOWN	RP11-447H19.1	1	1	-0.339348
chr5	43287601	43290839	43289220	ENSG00000261604.1	+	antisense	KNOWN	CTD-2636A23.2	2	2	-0.239541
chr5	43289395	43313512	43301453	ENSG00000112972.14	-	protein_coding	KNOWN	HMGCS1	7	11	-0.250542
chr5	43336164	43348716	43342440	ENSG00000188850.9	+	transcribed_processed_pseudogene	KNOWN	RP11-159F24.2	2	3	0.054517
chr5	43376645	43412391	43394518	ENSG00000151882.11	-	protein_coding	KNOWN	CCL28	4	4	-0.074083
chr5	43444252	43483893	43464072	ENSG00000151881.14	-	protein_coding	KNOWN	C5orf28	6	5	-0.083621
chr5	43483959	43509356	43496657	ENSG00000249492.1	+	processed_transcript	KNOWN	RP11-159F24.3	2	3	0.004844
chr5	43486701	43515145	43500923	ENSG00000172244.8	-	protein_coding	KNOWN	C5orf34	5	13	-0.002951
chr5	43495073	43496454	43495763	ENSG00000249855.1	-	processed_pseudogene	KNOWN	EEF1A1P19	1	1	-0.043663
chr5	43511058	43521811	43516434	ENSG00000248554.1	+	antisense	KNOWN	RP11-159F24.6	1	3	0.050651
chr5	43515274	43525310	43520292	ENSG00000248240.1	+	antisense	KNOWN	RP11-159F24.5	1	3	0.050651
chr5	43526267	43557758	43542012	ENSG00000172239.13	-	protein_coding	KNOWN	PAIP1	10	11	-0.136071
chr5	43571594	43603230	43587412	ENSG00000248092.7	-	antisense	KNOWN	NNT-AS1	6	3	0.110979
chr5	43586367	43587543	43586955	ENSG00000279557.1	-	TEC	KNOWN	CTD-2210P15.3	1	1	0.024088
chr5	43586918	43588223	43587570	ENSG00000249286.1	-	processed_pseudogene	KNOWN	AMD1P3	1	2	0.024088
chr5	43602692	43707405	43655048	ENSG00000112992.16	+	protein_coding	KNOWN	NNT	10	22	-0.121495
chr5	43666766	43667232	43666999	ENSG00000224993.3	-	processed_pseudogene	KNOWN	RPL29P12	1	1	-0.288039
chr5	43874367	43886628	43880497	ENSG00000249276.1	+	lincRNA	KNOWN	RP11-8L21.1	1	2	-0.464878
chr5	44066624	44066731	44066677	ENSG00000212561.1	-	snRNA	KNOWN	RNU6-381P	1	1	-0.171043
chr5	44303544	44389706	44346625	ENSG00000070193.4	-	protein_coding	KNOWN	FGF10	2	3	-0.619064
chr5	44388732	44413989	44401360	ENSG00000248464.1	+	antisense	KNOWN	FGF10-AS1	1	3	-0.268864
chr5	44495618	44510282	44502950	ENSG00000249203.1	-	lincRNA	KNOWN	RP11-473L15.3	2	3	-0.262879
chr5	44698431	44700808	44699619	ENSG00000250418.1	-	lincRNA	KNOWN	RP11-503D12.1	1	2	-0.686652
chr5	44716193	44716486	44716339	ENSG00000263556.2	+	misc_RNA	KNOWN	RN7SL383P	1	1	-0.771272
chr5	44744900	44808777	44776838	ENSG00000251141.5	-	antisense	KNOWN	RP11-53O19.1	8	5	-0.419092
chr5	44752949	44765744	44759346	ENSG00000248779.1	+	lincRNA	KNOWN	RP11-53O19.2	1	3	-0.418492
chr5	44808925	44820428	44814676	ENSG00000112996.9	+	protein_coding	KNOWN	MRPS30	5	8	-0.424227
chr5	44826076	44828592	44827334	ENSG00000272335.1	+	lincRNA	KNOWN	RP11-53O19.3	1	1	-0.443605
chr5	45028496	45028577	45028536	ENSG00000280761.1	-	miRNA	NOVEL	AC114954.1	1	1	-0.244190
chr5	45035199	45098647	45066923	ENSG00000248148.1	+	lincRNA	KNOWN	RP11-357F12.1	1	2	-0.620756
chr5	45254950	45696498	45475724	ENSG00000164588.5	-	protein_coding	KNOWN	HCN1	2	8	-0.717403
chr5	45557919	45559986	45558952	ENSG00000250422.1	+	processed_pseudogene	KNOWN	RP11-484L7.1	1	1	-0.767831
chr5	45574590	45576612	45575601	ENSG00000250017.1	+	processed_pseudogene	KNOWN	RP11-484L7.2	1	1	-0.436557
chr5	45890216	45895970	45893093	ENSG00000250122.1	+	lincRNA	KNOWN	CTD-2013M15.1	1	2	-0.512080
chr5	50396192	50443248	50419720	ENSG00000170571.11	-	protein_coding	KNOWN	EMB	5	9	-0.640101
chr5	50603229	50603511	50603370	ENSG00000271455.1	+	processed_pseudogene	KNOWN	RP11-269M20.2	1	1	-0.513377
chr5	50633124	50633602	50633363	ENSG00000213956.4	+	processed_pseudogene	KNOWN	RP11-269M20.1	1	1	-0.489056
chr5	50662859	50663266	50663062	ENSG00000271752.1	-	lincRNA	KNOWN	RP11-269M20.3	1	1	-0.150579
chr5	50665899	50846522	50756210	ENSG00000151883.16	+	protein_coding	KNOWN	PARP8	23	27	-0.489395
chr5	50858760	50860020	50859390	ENSG00000249405.1	-	lincRNA	KNOWN	RP11-317O24.1	1	2	-0.693269
chr5	50903608	50903743	50903675	ENSG00000270830.1	+	processed_pseudogene	KNOWN	RP11-317O24.3	1	1	-0.354691
chr5	50929484	50934521	50932002	ENSG00000251601.1	-	lincRNA	KNOWN	RP11-317O24.2	1	3	-0.037838
chr5	50965687	50967008	50966347	ENSG00000250360.1	-	lincRNA	KNOWN	CTD-2089N3.1	1	2	0.044057
chr5	50969217	50970167	50969692	ENSG00000251573.2	-	lincRNA	KNOWN	CTD-2089N3.2	2	3	0.012492
chr5	50969660	50970187	50969923	ENSG00000248918.2	+	lincRNA	KNOWN	CTD-2089N3.3	1	2	-0.019618
chr5	51055353	51055459	51055406	ENSG00000207060.1	-	snRNA	KNOWN	RNU6-480P	1	1	-0.950821
chr5	51061469	51061557	51061513	ENSG00000222945.2	-	miRNA	NOVEL	AC091866.1	1	1	-0.950821
chr5	51101172	51101643	51101407	ENSG00000278734.1	-	processed_pseudogene	KNOWN	CTD-2054H24.1	1	1	-0.397393
chr5	51167541	51167647	51167594	ENSG00000206606.1	-	snRNA	KNOWN	RNU6-1296P	1	1	-0.668338
chr5	51275253	51275734	51275493	ENSG00000240627.1	+	processed_pseudogene	KNOWN	CTD-2312P21.1	1	1	-0.617752
chr5	51372736	51383332	51378034	ENSG00000259663.2	-	antisense	KNOWN	CTD-2314G24.2	3	2	-0.615557
chr5	51383391	51394738	51389064	ENSG00000016082.14	+	protein_coding	KNOWN	ISL1	3	6	-0.480149
chr5	51409617	51410205	51409911	ENSG00000249338.1	-	processed_pseudogene	KNOWN	HMGB1P47	1	1	-0.397597
chr5	51427996	51428427	51428211	ENSG00000248891.2	-	processed_pseudogene	KNOWN	CTD-2335O3.2	1	1	-0.594642
chr5	51451158	51462089	51456623	ENSG00000251125.1	+	lincRNA	KNOWN	CTD-2335O3.3	1	3	-0.566500
chr5	51886688	51886769	51886728	ENSG00000251873.1	+	rRNA	KNOWN	RNA5SP182	1	1	-0.889393
chr5	51930808	51932036	51931422	ENSG00000249270.1	+	processed_pseudogene	KNOWN	KATNBL1P4	1	2	-0.562512
chr5	51963992	51964445	51964218	ENSG00000279470.1	+	TEC	KNOWN	RP11-182I21.2	1	1	-0.756005
chr5	52008031	52080987	52044509	ENSG00000248789.5	+	lincRNA	KNOWN	CTD-2203A3.1	2	4	-0.630453
chr5	52282567	52282859	52282713	ENSG00000244621.1	+	processed_pseudogene	KNOWN	RPS17P11	1	1	-0.662896
chr5	52579555	52581106	52580330	ENSG00000250827.1	-	processed_pseudogene	KNOWN	CTD-2141G3.1	1	1	-0.851425
chr5	52675193	52788026	52731609	ENSG00000248898.1	-	antisense	KNOWN	CTD-2288O8.1	1	4	-0.231161
chr5	52787896	52959210	52873553	ENSG00000213949.8	+	protein_coding	KNOWN	ITGA1	7	29	-0.117172
chr5	52787940	52804046	52795993	ENSG00000152684.10	+	protein_coding	KNOWN	PELO	2	3	-0.145099
chr5	52889666	52889954	52889810	ENSG00000251237.1	+	processed_pseudogene	KNOWN	B3GNTL1P1	1	1	-0.149766
chr5	52903908	52904478	52904193	ENSG00000241809.1	+	processed_pseudogene	KNOWN	CTD-2207L17.1	1	1	-0.280485
chr5	52932419	52990278	52961348	ENSG00000249899.5	-	antisense	KNOWN	CTD-2175A23.1	2	5	-0.148600
chr5	52989326	53094779	53042052	ENSG00000164171.10	+	protein_coding	KNOWN	ITGA2	6	30	-0.020840
chr5	53089016	53089468	53089242	ENSG00000272123.1	-	antisense	KNOWN	CTD-2366F13.2	1	1	-0.244190
chr5	53095679	53110063	53102871	ENSG00000164172.18	-	protein_coding	KNOWN	MOCS2	10	7	0.200397
chr5	53109842	53115126	53112484	ENSG00000247796.2	+	antisense	KNOWN	CTD-2366F13.1	3	3	-0.441345
chr5	53206561	53207176	53206868	ENSG00000213940.4	+	processed_pseudogene	KNOWN	RP11-94D20.1	1	1	-0.021071
chr5	53413504	53414260	53413882	ENSG00000240052.1	+	processed_pseudogene	KNOWN	RP11-289K10.1	1	2	0.109374
chr5	53480409	53487134	53483771	ENSG00000134363.11	+	protein_coding	KNOWN	FST	5	6	0.101452
chr5	53560633	53683340	53621986	ENSG00000164258.11	+	protein_coding	KNOWN	NDUFS4	6	6	-0.177383
chr5	53609587	53609658	53609622	ENSG00000238508.1	+	miRNA	NOVEL	AC024569.1	1	1	-0.082506
chr5	53776644	53819686	53798165	ENSG00000250447.5	-	lincRNA	KNOWN	CTD-2081C10.1	2	6	0.029127
chr5	53859166	53860401	53859783	ENSG00000217791.4	+	processed_pseudogene	KNOWN	ASS1P9	1	1	-0.282935
chr5	53880293	53881051	53880672	ENSG00000272416.1	-	lincRNA	KNOWN	CTD-2081C10.7	1	1	-0.079863
chr5	53883945	54310582	54097263	ENSG00000185305.10	-	protein_coding	KNOWN	ARL15	7	6	-0.068854
chr5	53912020	53912123	53912071	ENSG00000222960.1	-	snRNA	KNOWN	RNU6-272P	1	1	-0.135814
chr5	53942646	53942746	53942696	ENSG00000281639.1	+	miRNA	NOVEL	AC024571.1	1	1	0.200141
chr5	53951504	53951599	53951551	ENSG00000207627.1	-	miRNA	KNOWN	MIR581	1	1	0.108386
chr5	54048007	54048308	54048157	ENSG00000241230.3	-	misc_RNA	KNOWN	RN7SL801P	1	1	-0.094709
chr5	54075518	54075583	54075550	ENSG00000265421.1	-	miRNA	KNOWN	MIR4459	1	1	-0.027918
chr5	54286194	54286331	54286262	ENSG00000279638.1	-	TEC	KNOWN	CTD-2081C10.5	1	1	0.074398
chr5	54320944	54415125	54368034	ENSG00000249069.7	+	lincRNA	KNOWN	LINC01033	4	6	-0.102864
chr5	54399439	54400033	54399736	ENSG00000251597.1	+	processed_pseudogene	KNOWN	RPL37P25	1	2	0.041951
chr5	54455601	54456384	54455992	ENSG00000169271.2	+	protein_coding	KNOWN	HSPB3	1	1	0.139820
chr5	54517759	54546585	54532172	ENSG00000178996.12	+	protein_coding	KNOWN	SNX18	3	2	0.132633
chr5	54643557	54645987	54644772	ENSG00000280159.1	+	TEC	KNOWN	CTD-2591A1.1	1	1	0.062244
chr5	54808210	54872551	54840380	ENSG00000232517.2	-	unitary_pseudogene	KNOWN	AC112198.1	1	10	-0.007322
chr5	54852846	54852948	54852897	ENSG00000221073.1	-	miRNA	NOVEL	AC112198.2	1	1	-0.050809
chr5	54857272	54858491	54857881	ENSG00000226810.3	+	processed_pseudogene	KNOWN	RP11-45H22.1	1	1	-0.050809
chr5	54878238	54878588	54878413	ENSG00000249843.1	+	processed_pseudogene	KNOWN	RP11-45H22.2	1	1	0.242234
chr5	54956235	54957846	54957040	ENSG00000249016.1	-	lincRNA	KNOWN	RP11-45H22.3	1	2	-0.075953
chr5	54977864	55022671	55000267	ENSG00000164283.12	-	protein_coding	KNOWN	ESM1	4	3	-0.007783
chr5	55021299	55042844	55032071	ENSG00000240535.8	-	processed_transcript	KNOWN	CTD-2313F11.1	15	11	-0.064765
chr5	55024253	55034570	55029411	ENSG00000113088.5	+	protein_coding	KNOWN	GZMK	2	5	-0.050365
chr5	55040847	55040945	55040896	ENSG00000207229.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.102737
chr5	55054428	55055140	55054784	ENSG00000251376.1	+	lincRNA	KNOWN	CTD-2313F11.2	1	2	0.198907
chr5	55063179	55066230	55064704	ENSG00000248029.2	+	lincRNA	KNOWN	CTD-2313F11.3	1	2	0.198907
chr5	55073015	55096553	55084784	ENSG00000249454.1	+	unprocessed_pseudogene	KNOWN	GZMAP1	1	4	-0.090271
chr5	55102648	55110252	55106450	ENSG00000145649.7	+	protein_coding	KNOWN	GZMA	1	5	-0.010428
chr5	55112995	55173175	55143085	ENSG00000164287.12	-	protein_coding	KNOWN	CDC20B	5	12	0.091208
chr5	55160118	55167071	55163594	ENSG00000164294.13	+	protein_coding	KNOWN	GPX8	8	4	0.008223
chr5	55170532	55170622	55170577	ENSG00000198983.1	-	miRNA	KNOWN	MIR449A	1	1	0.059202
chr5	55170646	55170742	55170694	ENSG00000207728.1	-	miRNA	KNOWN	MIR449B	1	1	0.059202
chr5	55172262	55172353	55172307	ENSG00000251856.1	-	miRNA	KNOWN	MIR449C	1	1	0.059202
chr5	55219614	55227315	55223464	ENSG00000234602.7	-	protein_coding	KNOWN	MCIDAS	3	7	-0.183243
chr5	55231152	55233680	55232416	ENSG00000152669.8	-	protein_coding	KNOWN	CCNO	2	3	0.291556
chr5	55233934	55295201	55264567	ENSG00000251307.1	+	antisense	KNOWN	RP11-506H20.1	1	5	-0.125628
chr5	55256245	55307722	55281983	ENSG00000067248.9	-	protein_coding	KNOWN	DHX29	5	28	-0.313397
chr5	55307760	55425581	55366670	ENSG00000039123.15	+	protein_coding	KNOWN	SKIV2L2	9	27	-0.064445
chr5	55356308	55357523	55356915	ENSG00000271410.1	-	processed_pseudogene	KNOWN	RP11-506H20.2	1	1	0.126140
chr5	55406321	55406422	55406371	ENSG00000280573.1	+	miRNA	NOVEL	AC010480.1	1	1	0.038221
chr5	55424854	55535050	55479952	ENSG00000067113.16	-	protein_coding	KNOWN	PLPP1	6	6	0.138245
chr5	55484403	55485086	55484744	ENSG00000279883.1	+	TEC	KNOWN	CTD-2315M5.2	1	1	0.243995
chr5	55508850	55508926	55508888	ENSG00000265135.1	-	miRNA	KNOWN	MIR5687	1	1	0.118464
chr5	55530156	55530701	55530428	ENSG00000250853.1	-	processed_pseudogene	KNOWN	RNF138P1	1	1	0.084724
chr5	55551885	55552554	55552219	ENSG00000249410.1	-	processed_pseudogene	KNOWN	AK4P2	1	1	0.119648
chr5	55625845	55773194	55699519	ENSG00000177058.11	-	protein_coding	KNOWN	SLC38A9	26	16	-0.096418
chr5	55738017	55817157	55777587	ENSG00000152670.18	+	protein_coding	KNOWN	DDX4	14	22	-0.221231
chr5	55750206	55750401	55750303	ENSG00000251368.1	-	processed_pseudogene	KNOWN	RP11-175M2.1	1	1	-0.272772
chr5	55777469	55777587	55777528	ENSG00000199322.1	+	rRNA	KNOWN	RNA5SP183	1	1	-0.191402
chr5	55838801	55840025	55839413	ENSG00000248854.1	-	processed_pseudogene	KNOWN	HNRNPH1P3	1	1	-0.275740
chr5	55851379	55922853	55887116	ENSG00000164509.13	+	protein_coding	KNOWN	IL31RA	8	18	0.064438
chr5	55928640	55928741	55928690	ENSG00000279768.1	-	protein_coding	KNOWN	AC008914.1	1	2	0.336096
chr5	55935095	55994993	55965044	ENSG00000134352.19	-	protein_coding	KNOWN	IL6ST	15	18	-0.094422
chr5	55936143	55941727	55938935	ENSG00000262211.1	+	antisense	KNOWN	CTD-2031P19.5	1	3	0.053103
chr5	55944656	55944733	55944694	ENSG00000264281.3	+	processed_pseudogene	KNOWN	CTD-2031P19.4	1	1	0.053103
chr5	55995167	56003649	55999408	ENSG00000227908.3	+	antisense	KNOWN	FLJ31104	1	2	0.190294
chr5	56000518	56000621	56000569	ENSG00000238326.1	-	snoRNA	NOVEL	snoU13	1	1	0.190294
chr5	56059050	56067372	56063211	ENSG00000249236.1	+	lincRNA	KNOWN	CTD-2227I18.1	1	2	0.155070
chr5	56099678	56233359	56166518	ENSG00000164512.17	-	protein_coding	KNOWN	ANKRD55	6	12	0.109205
chr5	56125671	56125770	56125720	ENSG00000253032.1	+	snRNA	KNOWN	RNU6-299P	1	1	0.168343
chr5	56136979	56137531	56137255	ENSG00000243592.1	+	processed_pseudogene	KNOWN	RPL17P22	1	1	0.091992
chr5	56146739	56146846	56146792	ENSG00000223003.1	-	rRNA	KNOWN	RNA5SP184	1	1	0.091992
chr5	56192530	56193633	56193081	ENSG00000251435.1	+	processed_pseudogene	KNOWN	C1GALT1P2	1	1	-0.237316
chr5	56260333	56260446	56260389	ENSG00000212265.1	-	rRNA	KNOWN	RNA5SP185	1	1	0.174454
chr5	56275304	56276630	56275967	ENSG00000248781.1	-	processed_pseudogene	KNOWN	PSMC1P4	1	1	0.061295
chr5	56297564	56297689	56297626	ENSG00000210678.1	-	snRNA	KNOWN	RNU6ATAC2P	1	1	0.272113
chr5	56313905	56321397	56317651	ENSG00000249697.1	-	lincRNA	KNOWN	RP11-155L15.1	1	2	0.037544
chr5	56381781	56382075	56381928	ENSG00000250787.1	+	processed_pseudogene	KNOWN	HMGN1P17	1	1	-0.065248
chr5	56457038	56457138	56457088	ENSG00000265665.1	-	miRNA	NOVEL	AC008391.1	1	1	0.218904
chr5	56457795	56481946	56469870	ENSG00000248727.5	-	lincRNA	KNOWN	CTC-236F12.4	2	5	0.171308
chr5	56504635	56505072	56504853	ENSG00000226221.1	-	processed_pseudogene	KNOWN	RPL26P19	1	1	0.167543
chr5	56511567	56606232	56558899	ENSG00000225940.5	-	protein_coding	KNOWN	C5orf67	2	6	-0.013488
chr5	56536583	56537826	56537204	ENSG00000234553.1	-	sense_intronic	KNOWN	AC022431.3	1	2	0.223236
chr5	56770799	56772303	56771551	ENSG00000228650.2	+	lincRNA	KNOWN	AC008940.1	1	2	-0.069371
chr5	56815574	56896152	56855863	ENSG00000095015.5	+	protein_coding	KNOWN	MAP3K1	2	20	-0.121692
chr5	56842016	56862164	56852090	ENSG00000237705.1	-	antisense	KNOWN	AC008937.2	1	4	-0.028354
chr5	56900041	56910714	56905377	ENSG00000225230.1	-	antisense	KNOWN	AC008937.3	1	2	-0.362284
chr5	56909260	56925532	56917396	ENSG00000155542.11	+	protein_coding	KNOWN	SETD9	11	6	0.126679
chr5	56919602	56971675	56945638	ENSG00000155545.19	-	protein_coding	KNOWN	MIER3	11	14	-0.145617
chr5	56927874	56929573	56928723	ENSG00000271828.1	+	antisense	KNOWN	CTD-2310F14.1	1	1	0.151698
chr5	56941307	56947152	56944229	ENSG00000235635.1	+	antisense	KNOWN	AC016644.1	1	2	-0.300923
chr5	56975593	56976224	56975908	ENSG00000233943.1	-	processed_pseudogene	KNOWN	AC114973.1	1	1	-0.226084
chr5	57081745	57081951	57081848	ENSG00000248652.2	-	processed_pseudogene	KNOWN	RP11-101B14.4	1	1	-0.539921
chr5	57120796	57122624	57121710	ENSG00000250480.3	+	processed_pseudogene	KNOWN	RP11-101B14.1	1	3	-0.019757
chr5	57169108	57169209	57169158	ENSG00000207293.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.330100
chr5	57173948	57264679	57219313	ENSG00000062194.15	+	protein_coding	KNOWN	GPBP1	9	13	0.046905
chr5	57317989	57320020	57319004	ENSG00000248586.2	-	processed_pseudogene	KNOWN	CTD-2516K3.3	1	1	-0.068049
chr5	57395060	57533424	57464242	ENSG00000250961.1	+	antisense	KNOWN	CTD-2023N9.1	1	4	0.007511
chr5	57422464	57424391	57423427	ENSG00000250308.2	+	processed_pseudogene	KNOWN	SALL4P1	1	2	0.021170
chr5	57480016	57482809	57481412	ENSG00000169067.3	-	protein_coding	KNOWN	ACTBL2	1	1	-0.034325
chr5	57481820	57481903	57481861	ENSG00000264748.1	-	miRNA	NOVEL	AC025470.1	1	1	-0.034325
chr5	57550906	57551033	57550969	ENSG00000281462.1	-	miRNA	NOVEL	AC008780.1	1	1	-0.091074
chr5	57574027	57614341	57594184	ENSG00000248294.1	+	lincRNA	KNOWN	CTD-2023N9.2	1	4	-0.110550
chr5	57614389	57617431	57615910	ENSG00000249436.1	+	lincRNA	KNOWN	CTD-2023N9.3	1	2	-0.198598
chr5	57751192	57751717	57751454	ENSG00000249198.1	-	lincRNA	KNOWN	RP11-772C9.1	1	1	-0.231846
chr5	57872939	57873046	57872992	ENSG00000266864.1	-	miRNA	NOVEL	AC116606.1	1	1	-0.021017
chr5	57890327	57899162	57894744	ENSG00000249584.1	-	lincRNA	KNOWN	RP11-478P10.1	1	3	-0.239459
chr5	58108082	58122341	58115211	ENSG00000248132.2	-	lincRNA	KNOWN	CTD-2037L6.2	1	5	-0.252144
chr5	58161197	58161752	58161474	ENSG00000248271.1	+	processed_pseudogene	KNOWN	PGAM1P1	1	1	-0.427382
chr5	58453982	58460260	58457121	ENSG00000145632.14	-	protein_coding	KNOWN	PLK2	15	15	0.074714
chr5	58491435	58497090	58494262	ENSG00000175857.8	+	protein_coding	KNOWN	GAPT	7	3	-0.351310
chr5	58503295	58503700	58503497	ENSG00000271257.1	+	processed_pseudogene	KNOWN	CTD-2117L12.3	1	1	-0.351310
chr5	58530043	58530109	58530076	ENSG00000265699.1	-	miRNA	KNOWN	MIR548AE2	1	1	-0.223510
chr5	58541567	58558243	58549905	ENSG00000250127.1	-	lincRNA	KNOWN	CTD-2117L12.1	1	4	-0.252798
chr5	58582221	58859394	58720807	ENSG00000152932.7	+	protein_coding	KNOWN	RAB3C	4	5	-0.495484
chr5	58741581	58817099	58779340	ENSG00000248475.5	-	antisense	KNOWN	RP11-479O16.1	2	4	-0.531013
chr5	58822503	58823714	58823108	ENSG00000240412.1	+	processed_pseudogene	KNOWN	RPL5P15	1	2	-0.508157
chr5	58846885	58863414	58855149	ENSG00000248733.1	-	antisense	KNOWN	CTD-2176I21.2	1	3	-0.294171
chr5	58969038	60522120	59745579	ENSG00000113448.16	-	protein_coding	KNOWN	PDE4D	27	17	-0.456742
chr5	59039761	59063503	59051632	ENSG00000247345.2	+	antisense	KNOWN	RP11-266N13.2	1	2	-0.466975
chr5	59200025	59200154	59200089	ENSG00000281006.1	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.529497
chr5	59314110	59314800	59314455	ENSG00000276214.1	+	processed_pseudogene	KNOWN	CTD-2146O16.1	1	1	-0.233995
chr5	59528861	59529251	59529056	ENSG00000251306.1	+	processed_pseudogene	KNOWN	NDUFB4P2	1	1	-0.435255
chr5	59703597	59703708	59703652	ENSG00000202601.3	-	miRNA	KNOWN	MIR582	1	1	-0.644974
chr5	60021249	60033020	60027134	ENSG00000248935.1	+	antisense	KNOWN	CTD-2254N19.1	2	4	-0.578011
chr5	60304047	60304151	60304099	ENSG00000202017.1	-	snRNA	KNOWN	RNU6-806P	1	1	-0.644974
chr5	60429903	60430276	60430089	ENSG00000213896.4	-	processed_pseudogene	KNOWN	RP11-546M4.1	1	1	-0.428958
chr5	60430738	60431112	60430925	ENSG00000280447.1	+	protein_coding	KNOWN	AC109486.1	1	1	-0.505910
chr5	60459848	60460739	60460293	ENSG00000214244.4	-	processed_pseudogene	KNOWN	SETP21	1	1	-0.466498
chr5	60487713	60547657	60517685	ENSG00000152931.7	+	lincRNA	KNOWN	PART1	3	4	-0.361537
chr5	60487713	60487929	60487821	ENSG00000273701.1	+	misc_RNA	NOVEL	PART1_1	1	1	-0.426245
chr5	60488078	60488327	60488202	ENSG00000275634.1	+	misc_RNA	NOVEL	PART1_2	1	1	-0.426245
chr5	60546219	60546349	60546284	ENSG00000276233.1	+	misc_RNA	NOVEL	PART1_3	1	1	-0.465786
chr5	60596912	60700190	60648551	ENSG00000035499.12	-	protein_coding	KNOWN	DEPDC1B	6	11	-0.375200
chr5	60630514	60630973	60630743	ENSG00000251303.1	+	processed_pseudogene	KNOWN	CAB39P1	1	1	-0.684570
chr5	60743563	60744970	60744266	ENSG00000250148.1	-	processed_pseudogene	KNOWN	KRT8P31	1	1	0.006092
chr5	60751791	60844389	60798090	ENSG00000164181.13	-	protein_coding	KNOWN	ELOVL7	7	11	-0.376908
chr5	60866457	60866935	60866696	ENSG00000272308.1	-	lincRNA	KNOWN	RP11-231G3.1	1	1	-0.257457
chr5	60873831	60945073	60909452	ENSG00000049167.13	-	protein_coding	KNOWN	ERCC8	8	13	-0.325356
chr5	60891935	60893577	60892756	ENSG00000215032.2	-	processed_pseudogene	KNOWN	GNL3LP1	1	1	-0.325928
chr5	60917490	60919573	60918531	ENSG00000233847.1	+	antisense	KNOWN	AC104113.3	1	3	-0.401048
chr5	60945129	61153037	61049083	ENSG00000164182.10	+	protein_coding	KNOWN	NDUFAF2	4	5	-0.252252
chr5	61114432	61116753	61115592	ENSG00000279985.1	-	TEC	KNOWN	CTC-436P18.4	1	1	-0.290952
chr5	61145846	61146376	61146111	ENSG00000276945.1	-	unprocessed_pseudogene	KNOWN	CTC-436P18.5	1	1	-0.223104
chr5	61157709	61162474	61160091	ENSG00000188725.7	-	protein_coding	KNOWN	SMIM15	2	4	-0.447167
chr5	61162070	61232040	61197055	ENSG00000251279.1	+	antisense	KNOWN	CTC-436P18.1	1	4	-0.075115
chr5	61201309	61264929	61233119	ENSG00000249279.5	-	lincRNA	KNOWN	CTC-436P18.3	2	3	-0.042713
chr5	61332273	61546170	61439221	ENSG00000130449.5	+	protein_coding	KNOWN	ZSWIM6	1	14	-0.135190
chr5	61347126	61347716	61347421	ENSG00000251682.1	+	processed_pseudogene	KNOWN	RP11-631M6.3	1	1	0.230320
chr5	61356436	61356545	61356490	ENSG00000277348.1	+	miRNA	NOVEL	AC122718.1	1	1	-0.099540
chr5	61375112	61375855	61375483	ENSG00000250461.1	+	processed_pseudogene	KNOWN	RP11-631M6.2	1	1	-0.528999
chr5	61390668	61391871	61391269	ENSG00000213891.3	-	processed_pseudogene	KNOWN	RPL3P6	1	1	-0.101780
chr5	61557283	61557367	61557325	ENSG00000223200.1	+	miRNA	NOVEL	AC008836.1	1	1	-0.086978
chr5	61637708	61751763	61694735	ENSG00000178722.12	+	processed_transcript	KNOWN	C5orf64	6	4	-0.216593
chr5	61658474	61698432	61678453	ENSG00000248529.5	-	antisense	KNOWN	RP11-2O17.2	3	8	-0.266942
chr5	61664145	61664239	61664192	ENSG00000212215.1	-	snRNA	KNOWN	RNU6-913P	1	1	-0.103673
chr5	61732774	61735669	61734221	ENSG00000251575.2	-	lincRNA	KNOWN	CTD-2170G1.2	2	2	-0.132975
chr5	61831947	61833024	61832485	ENSG00000249878.1	-	processed_pseudogene	KNOWN	CTD-2244C20.1	1	1	-0.234236
chr5	61878109	61886129	61882119	ENSG00000248199.1	+	lincRNA	KNOWN	CTD-2244C20.2	1	2	-0.387618
chr5	62146665	62146946	62146805	ENSG00000251983.1	+	misc_RNA	KNOWN	RN7SKP157	1	1	-0.228049
chr5	62306162	62537249	62421705	ENSG00000068796.16	+	protein_coding	KNOWN	KIF2A	10	21	-0.111133
chr5	62387254	62403939	62395596	ENSG00000086189.9	-	protein_coding	KNOWN	DIMT1	5	12	-0.143507
chr5	62403972	62628582	62516277	ENSG00000086200.16	+	protein_coding	KNOWN	IPO11	14	30	-0.204188
chr5	62443176	62443282	62443229	ENSG00000199279.1	+	snRNA	KNOWN	RNU6-661P	1	1	0.046763
chr5	62512246	62512482	62512364	ENSG00000268942.2	-	processed_pseudogene	KNOWN	CKS1BP3	1	1	0.054517
chr5	62561859	62562216	62562037	ENSG00000241991.1	-	processed_pseudogene	KNOWN	RP11-95I19.2	1	1	-0.419348
chr5	62575951	62576271	62576111	ENSG00000240436.1	-	processed_pseudogene	KNOWN	RP11-95I19.1	1	1	-0.279456
chr5	62578735	62581448	62580091	ENSG00000186105.7	+	protein_coding	KNOWN	LRRC70	3	3	-0.279456
chr5	62776877	62777263	62777070	ENSG00000217416.4	-	processed_pseudogene	KNOWN	ISCA1P1	1	1	-0.069896
chr5	63022919	63023489	63023204	ENSG00000249579.2	-	processed_pseudogene	KNOWN	RP11-586E1.1	1	1	-0.445973
chr5	63301523	63302056	63301789	ENSG00000248185.1	+	processed_pseudogene	KNOWN	CTD-2049O17.1	1	2	-0.580123
chr5	63957893	63981043	63969468	ENSG00000248285.1	-	sense_overlapping	KNOWN	RP11-158J3.2	1	2	-0.470806
chr5	63960356	63962507	63961431	ENSG00000178394.4	-	protein_coding	KNOWN	HTR1A	2	2	-0.679531
chr5	64165844	64372869	64269356	ENSG00000164197.11	+	protein_coding	KNOWN	RNF180	3	8	-0.579290
chr5	64404512	64486615	64445563	ENSG00000236068.2	-	unitary_pseudogene	KNOWN	AC016561.1	1	5	-0.601359
chr5	64506257	64612312	64559284	ENSG00000186479.4	+	protein_coding	KNOWN	RGS7BP	3	6	-0.276295
chr5	64539504	64539792	64539648	ENSG00000242547.3	+	misc_RNA	KNOWN	RN7SL169P	1	1	-0.035013
chr5	64573569	64573670	64573619	ENSG00000201869.1	+	snRNA	KNOWN	RNU6-294P	1	1	-0.219048
chr5	64674853	64675387	64675120	ENSG00000224296.3	+	processed_pseudogene	KNOWN	MRPL49P1	1	1	-0.362040
chr5	64690308	64718090	64704199	ENSG00000145642.11	+	protein_coding	KNOWN	FAM159B	5	4	-0.483228
chr5	64718144	64768685	64743414	ENSG00000153006.14	-	protein_coding	KNOWN	SREK1IP1	5	6	-0.366970
chr5	64768930	65018763	64893846	ENSG00000153015.15	+	protein_coding	KNOWN	CWC27	5	14	-0.326717
chr5	64839096	64839195	64839145	ENSG00000281653.1	+	miRNA	NOVEL	AC109465.1	1	1	-0.544318
chr5	65020038	65020551	65020294	ENSG00000272370.1	+	lincRNA	KNOWN	RP11-307L14.1	1	1	-0.397524
chr5	65020614	65020989	65020801	ENSG00000272354.1	+	lincRNA	KNOWN	RP11-307L14.2	1	1	-0.397524
chr5	65123369	65123474	65123421	ENSG00000207439.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.226085
chr5	65148736	65481920	65315328	ENSG00000049192.14	-	protein_coding	KNOWN	ADAMTS6	8	26	-0.169424
chr5	65209921	65210948	65210434	ENSG00000248288.1	+	processed_pseudogene	KNOWN	CTD-2194F4.2	1	2	-0.286171
chr5	65251127	65251784	65251455	ENSG00000250732.1	-	processed_pseudogene	KNOWN	RPEP1	1	1	-0.367440
chr5	65415353	65416222	65415787	ENSG00000205644.5	+	processed_pseudogene	KNOWN	CTD-2375G15.1	1	1	-0.026653
chr5	65486444	65487048	65486746	ENSG00000250081.1	-	lincRNA	KNOWN	CTD-2116N20.1	1	2	-0.047411
chr5	65517766	65563171	65540468	ENSG00000123219.12	-	protein_coding	KNOWN	CENPK	17	11	-0.304929
chr5	65563236	65587549	65575392	ENSG00000113593.11	+	protein_coding	KNOWN	PPWD1	15	12	-0.279750
chr5	65589680	65625975	65607827	ENSG00000113595.14	-	protein_coding	KNOWN	TRIM23	7	13	-0.308791
chr5	65604661	65604761	65604711	ENSG00000207352.1	-	snRNA	KNOWN	RNU6-540P	1	1	-0.279977
chr5	65624716	65666233	65645474	ENSG00000113597.17	+	protein_coding	KNOWN	TRAPPC13	12	13	-0.054474
chr5	65624765	65630891	65627828	ENSG00000253251.2	+	protein_coding	KNOWN	CTC-534A2.2	2	2	-0.300796
chr5	65665928	65723035	65694481	ENSG00000197860.9	-	protein_coding	KNOWN	SGTB	2	11	0.086467
chr5	65722196	65871725	65796960	ENSG00000123213.22	+	protein_coding	KNOWN	NLN	10	13	0.034268
chr5	65732973	65733654	65733313	ENSG00000251648.2	+	processed_pseudogene	KNOWN	CTD-2353N24.1	1	1	0.133097
chr5	65924629	65925135	65924882	ENSG00000269961.1	-	lincRNA	KNOWN	CTD-2033C11.1	1	1	0.039841
chr5	65926475	66082549	66004512	ENSG00000112851.14	+	protein_coding	KNOWN	ERBB2IP	17	26	0.068138
chr5	65961183	65961319	65961251	ENSG00000252904.1	-	snoRNA	NOVEL	SNORA76	1	1	0.135846
chr5	66139971	66183615	66161793	ENSG00000153914.15	+	protein_coding	KNOWN	SREK1	16	13	-0.174489
chr5	66144156	66144795	66144475	ENSG00000253744.1	-	antisense	KNOWN	AC025442.3	1	2	-0.224192
chr5	66206212	66209447	66207829	ENSG00000248846.2	-	lincRNA	KNOWN	CTD-2016O11.1	1	2	-0.149016
chr5	66298468	66322944	66310706	ENSG00000251391.4	+	lincRNA	KNOWN	RP11-305P14.1	1	4	-0.241136
chr5	66507544	66511604	66509574	ENSG00000250313.2	-	lincRNA	KNOWN	RP11-5P22.3	1	3	-0.323744
chr5	66572057	66572546	66572301	ENSG00000234838.3	+	processed_pseudogene	KNOWN	RP11-5P22.1	1	1	-0.451370
chr5	66596361	67169595	66882978	ENSG00000069020.18	+	protein_coding	KNOWN	MAST4	21	29	-0.307936
chr5	66622868	66623177	66623022	ENSG00000248803.1	+	processed_pseudogene	KNOWN	RP11-287J9.1	1	1	-0.284863
chr5	66662331	66662988	66662659	ENSG00000249057.1	+	sense_intronic	KNOWN	MAST4-IT1	1	1	-0.383346
chr5	67001383	67003953	67002668	ENSG00000229666.1	-	antisense	KNOWN	MAST4-AS1	1	2	-0.120417
chr5	67179613	67196799	67188206	ENSG00000134061.5	-	protein_coding	KNOWN	CD180	2	3	-0.087888
chr5	67268022	67270182	67269102	ENSG00000251206.1	+	lincRNA	KNOWN	CTD-2187J20.1	1	3	0.015270
chr5	67379378	67805238	67592308	ENSG00000249364.5	+	lincRNA	KNOWN	RP11-434D9.1	6	5	-0.504947
chr5	67463809	67475592	67469700	ENSG00000250978.5	-	processed_transcript	KNOWN	RP11-357D18.1	2	5	-0.516182
chr5	67464522	67464608	67464565	ENSG00000222939.1	-	miRNA	NOVEL	AC079467.1	1	1	-0.314825
chr5	67608654	67609130	67608892	ENSG00000239870.1	+	processed_pseudogene	KNOWN	RP11-83M16.1	1	1	-0.516054
chr5	67632266	67646789	67639527	ENSG00000249736.1	-	lincRNA	KNOWN	RP11-83M16.5	1	3	-0.715363
chr5	67636382	67638942	67637662	ENSG00000249238.1	+	processed_pseudogene	KNOWN	BCL9P1	1	1	-0.715363
chr5	67690033	67690437	67690235	ENSG00000250669.1	-	processed_pseudogene	KNOWN	RP11-83M16.3	1	1	-0.531154
chr5	67692812	67693200	67693006	ENSG00000249721.1	-	processed_pseudogene	KNOWN	RP11-83M16.4	1	1	-0.531154
chr5	67699429	67902600	67801014	ENSG00000250421.5	-	lincRNA	KNOWN	RP11-83M16.6	2	4	-0.415741
chr5	67800740	67890096	67845418	ENSG00000249894.1	-	lincRNA	KNOWN	RP11-434D9.2	1	3	-0.399985
chr5	67855735	67855986	67855860	ENSG00000273860.1	+	processed_pseudogene	KNOWN	CTD-3066C23.1	1	1	-0.595624
chr5	67967445	67967551	67967498	ENSG00000223149.1	+	miRNA	NOVEL	AC010376.1	1	1	-0.325676
chr5	68087161	68087494	68087327	ENSG00000253801.2	-	processed_pseudogene	KNOWN	CTD-2060F24.1	1	1	-0.178537
chr5	68159061	68159146	68159103	ENSG00000252108.1	-	snRNA	KNOWN	RNU6-1232P	1	1	-0.244604
chr5	68159218	68159893	68159555	ENSG00000213864.3	-	processed_pseudogene	KNOWN	EEF1B2P2	1	1	-0.244604
chr5	68189876	68198407	68194141	ENSG00000253787.1	+	lincRNA	KNOWN	RP11-404L6.2	1	3	-0.095019
chr5	68215720	68301821	68258770	ENSG00000145675.14	+	protein_coding	KNOWN	PIK3R1	16	16	-0.092443
chr5	68374765	68375292	68375028	ENSG00000251044.2	+	lincRNA	KNOWN	CTD-2582M21.1	1	2	-0.081838
chr5	68430427	68434481	68432454	ENSG00000248884.1	-	lincRNA	KNOWN	CTC-537E7.3	1	3	-0.186309
chr5	68523878	68530007	68526942	ENSG00000249588.1	+	lincRNA	KNOWN	CTC-537E7.1	1	2	0.177558
chr5	68531690	68533530	68532610	ENSG00000248359.1	-	lincRNA	KNOWN	CTC-537E7.2	1	2	0.169994
chr5	68832585	68962158	68897371	ENSG00000249335.1	-	lincRNA	KNOWN	CTC-340D7.1	1	3	-0.209974
chr5	68854910	68855085	68854997	ENSG00000250289.1	-	processed_pseudogene	KNOWN	VWA8P1	1	1	-0.331038
chr5	68873954	68874087	68874020	ENSG00000212249.2	+	snoRNA	NOVEL	U8	1	1	-0.227765
chr5	68890139	68890224	68890181	ENSG00000278251.1	-	miRNA	NOVEL	AC093523.1	1	1	-0.134601
chr5	68963246	68967845	68965545	ENSG00000250066.1	+	lincRNA	KNOWN	RP11-141O11.1	1	2	-0.084165
chr5	68970439	68970752	68970595	ENSG00000276309.1	-	misc_RNA	KNOWN	RN7SKP251	1	1	-0.102737
chr5	68970692	69030165	69000428	ENSG00000249352.4	-	lincRNA	KNOWN	RP11-141O11.2	2	3	-0.119800
chr5	69038518	69043821	69041169	ENSG00000250237.1	-	lincRNA	KNOWN	CTC-498J12.1	1	2	-0.103928
chr5	69068925	69069200	69069062	ENSG00000249183.1	-	processed_pseudogene	KNOWN	SUMO2P4	1	1	-0.359704
chr5	69093646	69131069	69112357	ENSG00000145740.18	+	protein_coding	KNOWN	SLC30A5	9	17	0.072491
chr5	69113112	69136394	69124753	ENSG00000248664.1	-	antisense	KNOWN	CTC-498J12.3	1	6	0.003233
chr5	69160806	69160939	69160872	ENSG00000220986.1	+	snoRNA	NOVEL	SNORA50	1	1	-0.025365
chr5	69160808	69160939	69160873	ENSG00000280894.1	+	snoRNA	NOVEL	SNORA76	1	1	-0.025365
chr5	69167010	69178245	69172627	ENSG00000134057.14	+	protein_coding	KNOWN	CCNB1	7	9	0.033618
chr5	69186359	69189452	69187905	ENSG00000280187.1	-	TEC	KNOWN	CTC-351M12.1	1	1	0.054998
chr5	69189548	69210357	69199952	ENSG00000153044.9	+	protein_coding	KNOWN	CENPH	6	9	-0.012808
chr5	69217760	69230129	69223944	ENSG00000134056.11	+	protein_coding	KNOWN	MRPS36	5	4	0.304308
chr5	69234795	69277430	69256112	ENSG00000134058.10	+	protein_coding	KNOWN	CDK7	16	12	0.047793
chr5	69280175	69332809	69306492	ENSG00000183323.12	-	protein_coding	KNOWN	CCDC125	7	13	0.054189
chr5	69313371	69313872	69313621	ENSG00000213830.3	-	processed_pseudogene	KNOWN	CFL1P5	1	1	0.116938
chr5	69333929	69334249	69334089	ENSG00000215006.4	+	processed_pseudogene	KNOWN	CHCHD2P2	1	1	-0.036165
chr5	69349936	69350445	69350190	ENSG00000271045.1	+	processed_pseudogene	KNOWN	RP11-1113N2.4	1	1	0.131272
chr5	69350984	69370013	69360498	ENSG00000085231.13	-	protein_coding	KNOWN	AK6	5	5	0.154831
chr5	69364743	69370013	69367378	ENSG00000273841.4	-	protein_coding	KNOWN	TAF9	8	3	0.154590
chr5	69369293	69414801	69392047	ENSG00000152942.18	+	protein_coding	KNOWN	RAD17	20	19	0.023846
chr5	69415112	69444330	69429721	ENSG00000152939.14	+	protein_coding	KNOWN	MARVELD2	6	8	0.161178
chr5	69469883	69470136	69470009	ENSG00000244717.1	+	processed_pseudogene	KNOWN	RPS27P14	1	1	0.023122
chr5	69477472	69502466	69489969	ENSG00000249295.1	-	antisense	KNOWN	RP11-241G9.3	2	2	0.120656
chr5	69478997	69479265	69479131	ENSG00000266477.2	-	misc_RNA	KNOWN	RN7SL616P	1	1	0.083909
chr5	69492292	69558104	69525198	ENSG00000197822.10	+	protein_coding	KNOWN	OCLN	5	9	0.232023
chr5	69530613	69530717	69530665	ENSG00000212260.1	-	snRNA	KNOWN	RNU6-724P	1	1	0.345111
chr5	69560208	69594723	69577465	ENSG00000183474.15	+	protein_coding	KNOWN	GTF2H2C	15	17	0.041845
chr5	69607099	69624049	69615574	ENSG00000248477.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-848G14.2	2	5	-0.100720
chr5	69631963	69636399	69634181	ENSG00000250138.4	+	unprocessed_pseudogene	KNOWN	RP11-848G14.5	1	1	0.344266
chr5	69639459	69679259	69659359	ENSG00000253203.6	-	transcribed_unprocessed_pseudogene	KNOWN	GUSBP3	2	4	0.174189
chr5	69653248	69654334	69653791	ENSG00000248769.1	+	unprocessed_pseudogene	KNOWN	RP11-974F13.5	1	1	0.403652
chr5	69875271	69920867	69898069	ENSG00000198237.8	+	unprocessed_pseudogene	KNOWN	RP11-98J23.2	1	5	-0.343869
chr5	69898867	69903198	69901032	ENSG00000251158.1	-	unprocessed_pseudogene	KNOWN	RP11-98J23.1	1	1	-0.477029
chr5	69985204	69985501	69985352	ENSG00000249230.1	-	unprocessed_pseudogene	KNOWN	CDH12P2	1	1	-1.153765
chr5	70025247	70043113	70034180	ENSG00000205572.9	+	protein_coding	KNOWN	SERF1B	8	4	-0.102723
chr5	70049612	70078522	70064067	ENSG00000205571.12	+	protein_coding	KNOWN	SMN2	15	9	0.089811
chr5	70094659	70128434	70111546	ENSG00000179978.11	-	unprocessed_pseudogene	KNOWN	RP11-1319K7.1	1	12	-0.234366
chr5	70132679	70132973	70132826	ENSG00000253492.1	+	unprocessed_pseudogene	KNOWN	CDH12P3	1	1	-0.539621
chr5	70197255	70207745	70202500	ENSG00000254701.3	-	unprocessed_pseudogene	KNOWN	RP11-1415C14.4	1	4	-0.075465
chr5	70219918	70258930	70239424	ENSG00000253816.3	-	unprocessed_pseudogene	KNOWN	RP11-1415C14.3	1	4	0.133357
chr5	70415352	70448015	70431683	ENSG00000226259.10	+	transcribed_unprocessed_pseudogene	KNOWN	GTF2H2B	4	16	-0.054475
chr5	70449636	70450353	70449994	ENSG00000269983.1	+	lincRNA	KNOWN	RP11-497H16.9	1	1	0.098812
chr5	70462244	70479215	70470729	ENSG00000250687.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-497H16.7	3	6	-0.013989
chr5	70495100	70500903	70498001	ENSG00000253333.1	-	unprocessed_pseudogene	KNOWN	RP11-497H16.8	1	3	0.084130
chr5	70516387	70555266	70535826	ENSG00000196302.5	-	unprocessed_pseudogene	KNOWN	RP11-497H16.5	1	4	0.074057
chr5	70751184	70795914	70773549	ENSG00000253366.3	+	unprocessed_pseudogene	KNOWN	RP11-589F5.4	1	5	-0.158687
chr5	70860285	70860579	70860432	ENSG00000254335.1	-	unprocessed_pseudogene	KNOWN	CDH12P1	1	1	-0.698555
chr5	70900665	70918530	70909597	ENSG00000172058.15	+	protein_coding	KNOWN	SERF1A	9	4	-0.264246
chr5	70925030	70953942	70939486	ENSG00000172062.16	+	protein_coding	KNOWN	SMN1	11	9	0.511700
chr5	70968483	71025114	70996798	ENSG00000249437.7	-	protein_coding	KNOWN	NAIP	10	17	-0.068142
chr5	71032670	71067689	71050179	ENSG00000145736.14	-	protein_coding	KNOWN	GTF2H2	14	17	-0.015081
chr5	71074225	71093193	71083709	ENSG00000230847.4	-	unprocessed_pseudogene	KNOWN	RP11-195E2.1	1	5	-0.205224
chr5	71102898	71128753	71115825	ENSG00000251634.2	-	unprocessed_pseudogene	KNOWN	RP11-1280N14.3	1	9	0.120379
chr5	71132993	71133287	71133140	ENSG00000253900.1	+	unprocessed_pseudogene	KNOWN	CDH12P4	1	1	-0.021964
chr5	71197646	71208130	71202888	ENSG00000215630.6	-	unprocessed_pseudogene	KNOWN	GUSBP9	1	4	-0.114459
chr5	71220356	71259238	71239797	ENSG00000235558.3	-	unprocessed_pseudogene	KNOWN	RP11-1198D22.1	1	4	-0.073581
chr5	71351855	71446342	71399098	ENSG00000250387.2	-	lincRNA	KNOWN	RP11-136K7.2	2	3	-0.631839
chr5	71372676	71374898	71373787	ENSG00000253985.1	-	lincRNA	KNOWN	RP11-136K7.3	1	3	-0.534550
chr5	71375786	71385993	71380889	ENSG00000169040.14	+	transcribed_unprocessed_pseudogene	KNOWN	PMCHL2	4	4	-0.534550
chr5	71387276	71387363	71387319	ENSG00000265132.1	-	miRNA	NOVEL	AC145141.2	1	1	-0.534550
chr5	71445616	71446569	71446092	ENSG00000249981.1	+	lincRNA	KNOWN	RP11-136K7.1	1	2	-0.409829
chr5	71455615	71567820	71511717	ENSG00000145734.18	+	protein_coding	KNOWN	BDP1	6	39	-0.149038
chr5	71475761	71476316	71476038	ENSG00000253536.1	-	processed_pseudogene	KNOWN	RP11-1174L13.2	1	1	0.243995
chr5	71537652	71537846	71537749	ENSG00000247911.3	-	processed_pseudogene	KNOWN	HMGN1P12	1	1	-0.216846
chr5	71587288	71658704	71622996	ENSG00000131844.15	+	protein_coding	KNOWN	MCCC2	9	17	-0.034071
chr5	71614984	71615084	71615034	ENSG00000280673.1	-	miRNA	NOVEL	AC143336.1	1	1	0.026774
chr5	71719163	71721048	71720105	ENSG00000164326.4	+	protein_coding	KNOWN	CARTPT	2	3	0.002908
chr5	71754378	71756301	71755339	ENSG00000278824.1	-	processed_pseudogene	KNOWN	RP11-1315F8.2	1	2	-0.025502
chr5	71831315	71831410	71831362	ENSG00000281845.1	-	miRNA	NOVEL	AC138942.1	1	1	-0.103139
chr5	72107234	72209570	72158402	ENSG00000131711.14	+	protein_coding	KNOWN	MAP1B	6	7	0.075490
chr5	72169467	72169540	72169503	ENSG00000264099.1	+	miRNA	KNOWN	MIR4803	1	1	0.230189
chr5	72219409	72320646	72270027	ENSG00000113048.16	-	protein_coding	KNOWN	MRPS27	16	12	-0.038814
chr5	72314397	72314688	72314542	ENSG00000244748.3	-	misc_RNA	KNOWN	RN7SL153P	1	1	-0.022265
chr5	72320367	72368395	72344381	ENSG00000049883.14	+	protein_coding	KNOWN	PTCD2	12	11	0.055543
chr5	72381794	72382393	72382093	ENSG00000244061.1	+	processed_pseudogene	KNOWN	RP11-389C8.1	1	1	0.162381
chr5	72417489	72418335	72417912	ENSG00000251108.1	+	processed_pseudogene	KNOWN	YBX1P5	1	1	0.084796
chr5	72439903	72442387	72441145	ENSG00000261269.1	-	sense_overlapping	KNOWN	RP11-389C8.2	1	1	0.192059
chr5	72442652	72507727	72475189	ENSG00000178175.11	-	protein_coding	KNOWN	ZNF366	3	5	0.098101
chr5	72574120	72660669	72617394	ENSG00000248371.5	-	lincRNA	KNOWN	CTC-347C20.2	3	3	0.013886
chr5	72687112	72762727	72724919	ENSG00000251613.3	-	lincRNA	KNOWN	CTC-347C20.1	2	5	-0.182110
chr5	72725419	72726151	72725785	ENSG00000226544.4	+	processed_pseudogene	KNOWN	RPL7P22	1	1	-0.131634
chr5	72733833	72734209	72734021	ENSG00000223497.1	+	unitary_pseudogene	KNOWN	AC063979.1	1	1	0.133097
chr5	72768702	72768811	72768756	ENSG00000206770.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.459993
chr5	72794405	72816565	72805485	ENSG00000249085.1	-	antisense	KNOWN	CTD-2631K10.1	1	2	-0.153248
chr5	72816312	72916733	72866522	ENSG00000083312.17	+	protein_coding	KNOWN	TNPO1	14	25	0.023659
chr5	72878591	72878663	72878627	ENSG00000263593.1	+	miRNA	KNOWN	MIR4804	1	1	0.118792
chr5	72878868	72879185	72879026	ENSG00000242602.1	-	processed_pseudogene	KNOWN	CTD-2339M3.1	1	1	0.118792
chr5	72953635	72954274	72953954	ENSG00000271926.1	-	lincRNA	KNOWN	CTD-2376I4.1	1	1	0.134805
chr5	72955206	72955699	72955452	ENSG00000272081.1	-	lincRNA	KNOWN	CTD-2376I4.2	1	1	0.134805
chr5	72955981	73090522	73023251	ENSG00000157107.13	+	protein_coding	KNOWN	FCHO2	7	26	-0.135130
chr5	72996920	72997642	72997281	ENSG00000251467.1	+	processed_pseudogene	KNOWN	CTC-250P20.2	1	1	0.135581
chr5	73020700	73021279	73020989	ENSG00000248930.1	-	processed_pseudogene	KNOWN	CTC-250P20.1	1	1	-0.509459
chr5	73100073	73100183	73100128	ENSG00000200833.2	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.306874
chr5	73120292	73131817	73126054	ENSG00000157111.12	+	protein_coding	KNOWN	TMEM171	2	4	0.253653
chr5	73132008	73150592	73141300	ENSG00000251599.1	-	antisense	KNOWN	RP11-232L2.2	1	2	0.242354
chr5	73152416	73152938	73152677	ENSG00000250747.1	-	processed_pseudogene	KNOWN	RP11-232L2.1	1	1	0.106419
chr5	73154111	73154184	73154147	ENSG00000238738.1	-	miRNA	NOVEL	AC116345.1	1	1	0.106419
chr5	73173195	73175143	73174169	ENSG00000164325.7	+	protein_coding	KNOWN	TMEM174	2	2	0.153392
chr5	73213947	73294934	73254440	ENSG00000249743.5	+	lincRNA	KNOWN	RP11-60A8.1	5	5	0.259916
chr5	73337906	73338533	73338219	ENSG00000251543.1	+	lincRNA	KNOWN	RP11-60A8.2	1	2	0.123019
chr5	73382384	73410509	73396446	ENSG00000249149.2	+	transcribed_processed_pseudogene	KNOWN	RP11-79P5.3	2	3	0.151653
chr5	73444827	73448362	73446594	ENSG00000251493.3	-	protein_coding	KNOWN	FOXD1	2	2	0.201063
chr5	73446357	73446984	73446670	ENSG00000247993.2	+	lincRNA	KNOWN	FOXD1-AS1	1	2	0.201063
chr5	73451498	73453395	73452446	ENSG00000251604.1	+	lincRNA	KNOWN	LINC01385	1	2	0.549465
chr5	73454187	73472896	73463541	ENSG00000251324.1	-	antisense	KNOWN	LINC01386	1	5	0.439418
chr5	73497550	73498293	73497921	ENSG00000272525.1	-	lincRNA	KNOWN	RP11-79P5.9	1	1	0.191527
chr5	73498408	73505635	73502021	ENSG00000145741.15	+	protein_coding	KNOWN	BTF3	9	6	0.191527
chr5	73508685	73509254	73508969	ENSG00000255883.1	+	processed_pseudogene	KNOWN	RP11-79P5.10	1	1	0.191527
chr5	73552335	73565686	73559010	ENSG00000164331.9	-	protein_coding	KNOWN	ANKRA2	8	9	-0.027918
chr5	73565443	73583377	73574410	ENSG00000164338.9	+	protein_coding	KNOWN	UTP15	8	13	-0.148785
chr5	73626158	73941993	73784075	ENSG00000214944.9	+	protein_coding	KNOWN	ARHGEF28	14	37	-0.009797
chr5	73778039	73786491	73782265	ENSG00000249293.1	-	antisense	KNOWN	CTC-575I10.1	1	3	0.107020
chr5	73803296	73803599	73803447	ENSG00000184084.7	-	processed_pseudogene	KNOWN	CTD-2372A4.1	1	1	0.218169
chr5	73828012	73828073	73828042	ENSG00000238913.1	-	snRNA	KNOWN	RNU7-196P	1	1	-0.124583
chr5	73952940	73954014	73953477	ENSG00000259968.3	+	lincRNA	KNOWN	RP11-428C6.2	1	1	0.084419
chr5	74084068	74103216	74093642	ENSG00000248474.1	-	lincRNA	KNOWN	CTD-2292M14.1	1	2	0.087022
chr5	74306410	74308325	74307367	ENSG00000248942.1	-	lincRNA	KNOWN	LINC01335	1	3	0.033098
chr5	74317986	74318285	74318135	ENSG00000244326.3	+	misc_RNA	KNOWN	RN7SL814P	1	1	0.223236
chr5	74321631	74340152	74330891	ENSG00000251041.1	+	lincRNA	KNOWN	CTD-2275D24.1	1	3	0.260258
chr5	74322486	74328297	74325391	ENSG00000249343.1	+	lincRNA	KNOWN	LINC01333	1	3	0.223236
chr5	74327995	74334766	74331380	ENSG00000250446.1	-	lincRNA	KNOWN	LINC01332	1	2	0.270783
chr5	74369376	74536976	74453176	ENSG00000248673.1	-	lincRNA	KNOWN	LINC01331	1	3	0.081851
chr5	74627406	74641424	74634415	ENSG00000171617.13	-	protein_coding	KNOWN	ENC1	7	4	0.226927
chr5	74640023	74722647	74681335	ENSG00000049860.13	+	protein_coding	KNOWN	HEXB	13	14	0.114994
chr5	74721204	74767371	74744287	ENSG00000164347.17	-	protein_coding	KNOWN	GFM2	10	22	-0.178474
chr5	74725099	74725204	74725151	ENSG00000207336.1	-	snRNA	KNOWN	RNU6-658P	1	1	-0.048016
chr5	74766991	74780113	74773552	ENSG00000164346.9	+	protein_coding	KNOWN	NSA2	5	6	-0.265316
chr5	74777574	74866951	74822262	ENSG00000198780.11	-	protein_coding	KNOWN	FAM169A	7	13	-0.295318
chr5	74779309	74779413	74779361	ENSG00000199645.1	+	snRNA	KNOWN	RNU6-1330P	1	1	-0.265560
chr5	74798994	74800100	74799547	ENSG00000250071.1	+	processed_pseudogene	KNOWN	CTD-2060C23.1	1	1	-0.105948
chr5	74865893	74867854	74866873	ENSG00000271714.1	+	antisense	KNOWN	CTD-2377O17.1	1	1	-0.323046
chr5	74882656	74882783	74882719	ENSG00000212363.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.006923
chr5	74917726	75023928	74970827	ENSG00000249856.1	-	lincRNA	KNOWN	CTD-2503O16.4	1	5	-0.024887
chr5	74929880	74930566	74930223	ENSG00000196390.6	+	processed_pseudogene	KNOWN	CTD-2503O16.3	1	1	-0.142550
chr5	74931662	74931817	74931739	ENSG00000239517.1	+	processed_pseudogene	KNOWN	CTD-2503O16.1	1	1	-0.141965
chr5	74990189	74990637	74990413	ENSG00000182383.8	-	processed_pseudogene	KNOWN	RPL27AP5	1	1	-0.051500
chr5	75006713	75007012	75006862	ENSG00000249157.1	-	processed_pseudogene	KNOWN	RP11-229C3.4	1	1	-0.051500
chr5	75025346	75030899	75028122	ENSG00000176928.5	-	protein_coding	KNOWN	GCNT4	1	1	0.051153
chr5	75047719	75052843	75050281	ENSG00000250889.2	-	lincRNA	KNOWN	LINC01336	2	3	0.108545
chr5	75068275	75236878	75152576	ENSG00000145700.9	-	protein_coding	KNOWN	ANKRD31	3	26	-0.438295
chr5	75225424	75225668	75225546	ENSG00000251663.1	+	processed_pseudogene	KNOWN	SUMO2P5	1	1	-0.867366
chr5	75320155	75336914	75328534	ENSG00000247372.2	-	antisense	KNOWN	CTD-2235C13.2	1	3	-0.211418
chr5	75336329	75362104	75349216	ENSG00000113161.15	+	protein_coding	KNOWN	HMGCR	13	20	-0.247723
chr5	75363760	75364242	75364001	ENSG00000271815.1	+	lincRNA	KNOWN	CTD-2235C13.3	1	1	-0.418970
chr5	75368486	75512138	75440312	ENSG00000113163.15	-	protein_coding	KNOWN	COL4A3BP	7	19	-0.243808
chr5	75374463	75374809	75374636	ENSG00000242198.1	+	processed_pseudogene	KNOWN	CTD-2235C13.1	1	1	-0.272672
chr5	75511756	75601144	75556450	ENSG00000122008.15	+	protein_coding	KNOWN	POLK	17	16	-0.201124
chr5	75538598	75538658	75538628	ENSG00000251724.1	-	snRNA	KNOWN	RNU7-175P	1	1	-0.047283
chr5	75598482	75599380	75598931	ENSG00000248881.1	-	antisense	KNOWN	CTC-366B18.2	1	2	-0.251310
chr5	75608817	75609983	75609400	ENSG00000272040.1	+	lincRNA	KNOWN	CTC-366B18.4	1	1	-0.251310
chr5	75611459	75671846	75641652	ENSG00000189045.13	+	protein_coding	KNOWN	ANKDD1B	4	14	-0.208643
chr5	75674124	75717481	75695802	ENSG00000152359.14	-	protein_coding	KNOWN	POC5	14	12	-0.354938
chr5	75709495	75709599	75709547	ENSG00000207333.1	-	snRNA	KNOWN	RNU6-680P	1	1	-0.320203
chr5	75752570	75753479	75753024	ENSG00000251078.1	-	processed_pseudogene	KNOWN	SLC25A5P9	1	1	0.017030
chr5	75831255	75832764	75832009	ENSG00000251419.1	-	processed_pseudogene	KNOWN	RP11-524L6.4	1	1	-0.377493
chr5	75910283	75910576	75910429	ENSG00000249301.1	-	processed_pseudogene	KNOWN	RP11-524L6.3	1	1	-0.182183
chr5	75910565	75911867	75911216	ENSG00000248684.1	+	processed_pseudogene	KNOWN	BIN2P2	1	1	-0.182183
chr5	75920670	75921660	75921165	ENSG00000228367.3	-	processed_pseudogene	KNOWN	RP11-524L6.2	1	1	-0.182183
chr5	76075531	76075920	76075725	ENSG00000249777.1	+	processed_pseudogene	KNOWN	SAP18P1	1	1	-0.602382
chr5	76078666	76079763	76079214	ENSG00000251342.1	+	processed_pseudogene	KNOWN	CTC-235G5.2	1	1	-0.602382
chr5	76081946	76084186	76083066	ENSG00000248127.1	-	lincRNA	KNOWN	CTC-235G5.3	1	2	-0.602382
chr5	76083172	76353939	76218555	ENSG00000122012.13	+	protein_coding	KNOWN	SV2C	3	13	-0.355166
chr5	76091708	76091801	76091754	ENSG00000252833.1	-	rRNA	KNOWN	RNA5SP186	1	1	-0.258289
chr5	76170093	76174331	76172212	ENSG00000254893.5	-	protein_coding	KNOWN	AC113404.1	2	2	-0.528304
chr5	76170930	76171106	76171018	ENSG00000251668.2	+	unprocessed_pseudogene	KNOWN	RP11-466P24.5	1	1	-0.528304
chr5	76242024	76242404	76242214	ENSG00000249014.2	-	processed_pseudogene	KNOWN	HMGN2P4	1	1	-0.575433
chr5	76280956	76281267	76281111	ENSG00000251107.1	+	processed_pseudogene	KNOWN	PDCD5P2	1	1	-0.141498
chr5	76285542	76311462	76298502	ENSG00000250348.1	-	antisense	KNOWN	RP11-466P24.6	1	3	-0.100955
chr5	76376675	76377149	76376912	ENSG00000251235.3	+	processed_pseudogene	KNOWN	SNRPCP2	1	1	-0.011959
chr5	76403249	76708132	76555690	ENSG00000145703.15	+	protein_coding	KNOWN	IQGAP2	19	36	-0.258088
chr5	76510440	76510766	76510603	ENSG00000250574.1	+	processed_pseudogene	KNOWN	CTD-2275D10.2	1	1	-0.430574
chr5	76606608	76608970	76607789	ENSG00000249713.1	-	antisense	KNOWN	CTD-2236F14.1	1	2	-0.333314
chr5	76615482	76623434	76619458	ENSG00000164220.6	-	protein_coding	KNOWN	F2RL2	2	2	-0.184526
chr5	76691439	76716215	76703827	ENSG00000225407.3	-	antisense	KNOWN	CTD-2384B11.2	1	4	-0.351263
chr5	76712195	76712327	76712261	ENSG00000277188.1	+	misc_RNA	NOVEL	NCRUPAR_1	1	1	0.026029
chr5	76712763	76712861	76712812	ENSG00000278237.1	+	misc_RNA	NOVEL	NCRUPAR_2	1	1	0.026029
chr5	76716043	76735781	76725912	ENSG00000181104.6	+	protein_coding	KNOWN	F2R	2	2	0.126449
chr5	76818933	76835315	76827124	ENSG00000164251.4	+	protein_coding	KNOWN	F2RL1	2	2	0.383610
chr5	76836900	76837195	76837047	ENSG00000264391.2	-	misc_RNA	KNOWN	RN7SL208P	1	1	-0.103928
chr5	76850001	76921650	76885825	ENSG00000171643.13	+	protein_coding	KNOWN	S100Z	3	5	-0.114976
chr5	76948791	76948870	76948830	ENSG00000252684.1	+	snRNA	KNOWN	RNU6ATAC36P	1	1	-0.175941
chr5	76952713	76981158	76966935	ENSG00000145708.10	+	protein_coding	KNOWN	CRHBP	5	7	-0.178945
chr5	77029251	77065234	77047242	ENSG00000164252.12	+	protein_coding	KNOWN	AGGF1	4	14	-0.124144
chr5	77072072	77087323	77079697	ENSG00000132846.5	-	protein_coding	KNOWN	ZBED3	3	3	-0.009453
chr5	77073881	77074520	77074200	ENSG00000250615.1	+	antisense	KNOWN	CTC-564N23.2	1	2	-0.009453
chr5	77080434	77080571	77080502	ENSG00000238961.1	-	snoRNA	KNOWN	SNORA47	1	1	-0.009453
chr5	77086740	77166909	77126824	ENSG00000250802.6	+	antisense	KNOWN	ZBED3-AS1	17	7	0.030375
chr5	77137967	77138076	77138021	ENSG00000222316.1	+	miRNA	NOVEL	AC008581.1	1	1	0.131520
chr5	77146568	77147165	77146866	ENSG00000251566.1	+	processed_pseudogene	KNOWN	HMGB1P35	1	1	0.131520
chr5	77210449	77429807	77320128	ENSG00000113231.13	+	protein_coding	KNOWN	PDE8B	9	22	0.057051
chr5	77290268	77291800	77291034	ENSG00000251400.1	+	processed_pseudogene	KNOWN	ALDH7A1P1	1	1	-0.098530
chr5	77425970	77620611	77523290	ENSG00000164253.12	-	protein_coding	KNOWN	WDR41	29	14	-0.255358
chr5	77545397	77546266	77545831	ENSG00000244019.1	+	processed_pseudogene	KNOWN	RPS2P24	1	1	-0.867366
chr5	77582376	77583122	77582749	ENSG00000244363.3	+	processed_pseudogene	KNOWN	RPL7P23	1	1	-0.314825
chr5	77628712	77639688	77634200	ENSG00000171540.7	-	protein_coding	KNOWN	OTP	2	3	-0.319030
chr5	77691166	77868780	77779973	ENSG00000171530.13	-	protein_coding	KNOWN	TBCA	9	5	-0.271226
chr5	77784881	77786003	77785442	ENSG00000213763.4	+	processed_pseudogene	KNOWN	ACTBP2	1	1	-0.005705
chr5	77942757	77946438	77944597	ENSG00000253572.2	-	lincRNA	KNOWN	RP11-107N7.1	1	2	0.013040
chr5	78000525	78294755	78147640	ENSG00000132842.13	-	protein_coding	KNOWN	AP3B1	8	27	-0.253526
chr5	78041879	78044138	78043008	ENSG00000253558.1	-	transcribed_processed_pseudogene	KNOWN	CTD-2179L22.1	1	1	-0.572588
chr5	78056624	78056746	78056685	ENSG00000222085.1	-	miRNA	NOVEL	AC024568.1	1	1	-0.199612
chr5	78222184	78222517	78222350	ENSG00000249372.1	+	processed_pseudogene	KNOWN	ATP6V1G1P6	1	1	-0.415803
chr5	78307503	78307914	78307708	ENSG00000251605.1	+	processed_pseudogene	KNOWN	CTD-2037K23.1	1	1	-0.152546
chr5	78314916	78315025	78314970	ENSG00000200331.1	-	snRNA	KNOWN	RNU6-183P	1	1	-0.056331
chr5	78317036	78317137	78317086	ENSG00000206714.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.056331
chr5	78342365	78360507	78351436	ENSG00000245556.2	-	lincRNA	KNOWN	SCAMP1-AS1	2	3	-0.149518
chr5	78360583	78479071	78419827	ENSG00000085365.17	+	protein_coding	KNOWN	SCAMP1	7	9	-0.091016
chr5	78485215	78770021	78627618	ENSG00000145685.13	-	protein_coding	KNOWN	LHFPL2	8	5	0.199475
chr5	78644265	78644845	78644555	ENSG00000248909.1	-	processed_pseudogene	KNOWN	HMGB1P21	1	1	0.307929
chr5	78708734	78716082	78712408	ENSG00000254170.1	-	processed_pseudogene	KNOWN	CTD-2073O6.1	1	3	0.236029
chr5	78753596	78753873	78753734	ENSG00000254310.1	+	processed_pseudogene	KNOWN	CTD-2045M21.1	1	1	0.174885
chr5	78777209	78986087	78881648	ENSG00000113273.15	-	protein_coding	KNOWN	ARSB	6	8	0.021224
chr5	78997606	79236038	79116822	ENSG00000132837.14	-	protein_coding	KNOWN	DMGDH	10	16	0.063865
chr5	79000112	79001124	79000618	ENSG00000214890.3	-	processed_pseudogene	KNOWN	CTD-2299I21.1	1	1	-0.057064
chr5	79069717	79089466	79079591	ENSG00000132840.9	+	protein_coding	KNOWN	BHMT2	7	8	-0.128286
chr5	79111779	79132290	79122034	ENSG00000145692.14	+	protein_coding	KNOWN	BHMT	6	8	0.126385
chr5	79170234	79170335	79170284	ENSG00000201955.1	-	misc_RNA	KNOWN	RNY3P1	1	1	0.215863
chr5	79191549	79191747	79191648	ENSG00000249829.2	+	processed_pseudogene	KNOWN	CTC-422A18.1	1	1	-0.056531
chr5	79220942	79221073	79221007	ENSG00000206592.1	+	snoRNA	NOVEL	SNORA18	1	1	0.365315
chr5	79229904	79230588	79230246	ENSG00000250330.1	+	processed_pseudogene	KNOWN	CTC-422A18.2	1	2	0.330449
chr5	79236189	79327215	79281702	ENSG00000152409.8	+	protein_coding	KNOWN	JMY	2	11	0.039859
chr5	79284132	79284918	79284525	ENSG00000213757.3	-	processed_pseudogene	KNOWN	CTC-451P13.1	1	1	-0.091608
chr5	79372636	79514217	79443426	ENSG00000152413.14	-	protein_coding	KNOWN	HOMER1	5	9	-0.349633
chr5	79510434	79510919	79510676	ENSG00000213755.3	+	processed_pseudogene	KNOWN	RP11-342F17.1	1	1	-0.020483
chr5	79529302	79530093	79529697	ENSG00000243160.1	+	processed_pseudogene	KNOWN	RP11-342F17.2	1	1	-0.039280
chr5	79532251	79532362	79532306	ENSG00000275447.1	+	miRNA	NOVEL	AC093270.1	1	1	-0.178656
chr5	79534853	79534954	79534903	ENSG00000207391.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.178656
chr5	79562745	79562846	79562795	ENSG00000277818.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.008120
chr5	79612120	79686648	79649384	ENSG00000164329.13	+	protein_coding	KNOWN	PAPD4	17	17	-0.373666
chr5	79689877	79800240	79745058	ENSG00000164309.14	+	protein_coding	KNOWN	CMYA5	3	13	-0.202001
chr5	79774348	79816190	79795269	ENSG00000250258.1	-	antisense	KNOWN	CTC-431G16.2	1	5	-0.220151
chr5	79849552	79849846	79849699	ENSG00000238254.3	-	processed_pseudogene	KNOWN	CTC-431G16.3	1	1	0.091992
chr5	79936579	79967626	79952102	ENSG00000250888.1	+	antisense	KNOWN	LINC01455	1	3	-0.101851
chr5	79976731	79991262	79983996	ENSG00000177034.14	-	protein_coding	KNOWN	MTX3	4	9	-0.315185
chr5	79991311	80083287	80037299	ENSG00000113296.14	+	protein_coding	KNOWN	THBS4	7	22	-0.198893
chr5	80019609	80019920	80019764	ENSG00000251050.1	+	processed_pseudogene	KNOWN	RP11-168A11.4	1	1	-0.084886
chr5	80033171	80033302	80033236	ENSG00000249778.1	-	processed_pseudogene	KNOWN	TRMT112P2	1	1	-0.255174
chr5	80052374	80083654	80068014	ENSG00000249825.5	-	antisense	KNOWN	CTD-2201I18.1	2	8	-0.071267
chr5	80111651	80256079	80183865	ENSG00000164300.15	-	protein_coding	KNOWN	SERINC5	7	14	0.106747
chr5	80128361	80143883	80136122	ENSG00000251675.1	+	antisense	KNOWN	CTC-458I2.2	1	3	0.081671
chr5	80288449	80289781	80289115	ENSG00000249438.2	+	processed_pseudogene	KNOWN	KRT18P45	1	1	-0.138963
chr5	80299678	80302847	80301262	ENSG00000184188.6	-	processed_pseudogene	KNOWN	CTC-512J14.7	1	2	-0.042309
chr5	80306235	80306368	80306301	ENSG00000251828.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.042309
chr5	80315671	80315826	80315748	ENSG00000244076.1	+	processed_pseudogene	KNOWN	CTC-512J14.1	1	1	0.040461
chr5	80319625	80321842	80320733	ENSG00000164299.6	+	protein_coding	KNOWN	SPZ1	2	2	0.040461
chr5	80331573	80332541	80332057	ENSG00000227087.4	-	processed_pseudogene	KNOWN	RBMX2P5	1	1	-0.300326
chr5	80351021	80351956	80351488	ENSG00000248569.1	-	processed_pseudogene	KNOWN	CTC-512J14.5	1	1	-0.025502
chr5	80359080	80360040	80359560	ENSG00000220157.4	-	processed_pseudogene	KNOWN	HNRNPA1P12	1	1	-0.025502
chr5	80365726	80365832	80365779	ENSG00000206774.1	-	snRNA	KNOWN	RNU6-211P	1	1	-0.025502
chr5	80408013	80479350	80443681	ENSG00000039319.16	+	protein_coding	KNOWN	ZFYVE16	13	19	-0.279844
chr5	80482293	80488063	80485178	ENSG00000249042.5	-	antisense	KNOWN	CTD-2015H6.3	2	3	-0.323046
chr5	80487969	80542563	80515266	ENSG00000152380.9	+	protein_coding	KNOWN	FAM151B	5	11	-0.115124
chr5	80498534	80498971	80498752	ENSG00000242706.2	-	processed_pseudogene	KNOWN	CTD-2015H6.2	1	1	0.152292
chr5	80500332	80501400	80500866	ENSG00000240003.2	+	processed_pseudogene	KNOWN	RPL7P24	1	2	0.152292
chr5	80556755	80570488	80563621	ENSG00000189127.7	-	protein_coding	KNOWN	ANKRD34B	2	6	-0.282346
chr5	80603383	80603644	80603513	ENSG00000251366.1	-	processed_pseudogene	KNOWN	DBIP2	1	1	-0.089719
chr5	80608623	80622524	80615573	ENSG00000251221.1	-	lincRNA	KNOWN	LINC01337	1	2	-0.319796
chr5	80626228	80654983	80640605	ENSG00000228716.6	-	protein_coding	KNOWN	DHFR	7	7	-0.274778
chr5	80630313	80631590	80630951	ENSG00000249655.1	-	antisense	KNOWN	CTC-325J23.2	1	2	-0.334273
chr5	80650000	80650086	80650043	ENSG00000271043.2	-	processed_pseudogene	KNOWN	MTRNR2L2	1	1	0.017154
chr5	80654648	80876460	80765554	ENSG00000113318.9	+	protein_coding	KNOWN	MSH3	3	24	-0.366677
chr5	80746339	80746819	80746579	ENSG00000248967.1	-	processed_pseudogene	KNOWN	RP11-241J12.3	1	1	-0.377493
chr5	80855507	80855843	80855675	ENSG00000244630.2	-	processed_pseudogene	KNOWN	RP11-241J12.1	1	1	-0.266639
chr5	80947697	80960907	80954302	ENSG00000251450.1	-	antisense	KNOWN	RASGRF2-AS1	2	4	-0.298511
chr5	80960672	81230156	81095414	ENSG00000113319.11	+	protein_coding	KNOWN	RASGRF2	5	28	-0.305839
chr5	80997183	80998047	80997615	ENSG00000251001.1	-	processed_pseudogene	KNOWN	CTD-2193P3.1	1	2	-0.555706
chr5	81113385	81114852	81114118	ENSG00000249772.1	-	antisense	KNOWN	CTD-2193P3.2	1	2	-0.492971
chr5	81204084	81301560	81252822	ENSG00000247572.7	-	antisense	KNOWN	CKMT2-AS1	7	4	-0.028576
chr5	81233285	81266397	81249841	ENSG00000131730.15	+	protein_coding	KNOWN	CKMT2	12	11	0.159049
chr5	81242330	81242599	81242464	ENSG00000248794.1	-	processed_pseudogene	KNOWN	CTD-2248H3.1	1	1	0.217523
chr5	81301590	81313297	81307443	ENSG00000131732.11	+	protein_coding	KNOWN	ZCCHC9	9	6	-0.086182
chr5	81330005	81394179	81362092	ENSG00000172497.8	-	protein_coding	KNOWN	ACOT12	4	15	-0.049261
chr5	81413021	81751797	81582409	ENSG00000145687.15	-	protein_coding	KNOWN	SSBP2	21	18	-0.270564
chr5	81851601	81852201	81851901	ENSG00000249483.1	+	lincRNA	KNOWN	CTD-2249K22.1	1	1	-0.221425
chr5	81892490	81892721	81892605	ENSG00000214857.4	+	processed_pseudogene	KNOWN	SHFM1P1	1	2	-0.251082
chr5	81972025	82276857	82124441	ENSG00000152348.15	+	protein_coding	KNOWN	ATG10	9	9	-0.352086
chr5	81978250	81978319	81978284	ENSG00000264142.1	+	miRNA	NOVEL	AC114969.1	1	1	-0.114459
chr5	81991995	81992481	81992238	ENSG00000236447.2	+	sense_intronic	KNOWN	ATG10-IT1	1	1	-0.116955
chr5	82009602	82010094	82009848	ENSG00000251495.1	-	processed_pseudogene	KNOWN	PPIAP11	1	1	-0.109833
chr5	82073055	82073702	82073378	ENSG00000248192.1	-	antisense	KNOWN	ATG10-AS1	1	1	-0.833240
chr5	82078427	82078724	82078575	ENSG00000265684.2	+	misc_RNA	KNOWN	RN7SL378P	1	1	-0.833240
chr5	82265157	82265259	82265208	ENSG00000251374.1	-	processed_pseudogene	KNOWN	RPS23P5	1	1	-0.456751
chr5	82273358	82278577	82275967	ENSG00000186468.12	-	protein_coding	KNOWN	RPS23	8	6	0.000844
chr5	82279462	82386977	82333219	ENSG00000205464.11	+	protein_coding	KNOWN	ATP6AP1L	5	10	-0.058366
chr5	82545862	82546310	82546086	ENSG00000248393.1	-	lincRNA	KNOWN	CTD-2015A6.1	1	1	0.142323
chr5	82586776	82587411	82587093	ENSG00000248870.1	-	lincRNA	KNOWN	CTD-2015A6.2	1	1	-0.417306
chr5	82765404	82766333	82765868	ENSG00000249100.1	+	lincRNA	KNOWN	CTD-2218K11.2	1	1	-0.301829
chr5	82777797	82778586	82778191	ENSG00000240411.2	+	processed_pseudogene	KNOWN	RPL5P16	1	1	-0.373672
chr5	82824884	82825184	82825034	ENSG00000248105.1	+	processed_pseudogene	KNOWN	CTD-2218K11.3	1	1	-0.668821
chr5	82850864	82859836	82855350	ENSG00000281327.1	-	lincRNA	KNOWN	LINC01338	1	4	-0.436828
chr5	82919376	82921119	82920247	ENSG00000248112.1	-	lincRNA	KNOWN	RP11-78C3.1	1	2	-0.689113
chr5	82940458	82940983	82940720	ENSG00000249857.1	-	lincRNA	KNOWN	CTD-2227C6.3	1	1	-0.015537
chr5	82968888	82977153	82973020	ENSG00000248400.2	+	processed_pseudogene	KNOWN	ST13P12	1	2	-0.327986
chr5	83012285	83013109	83012697	ENSG00000249664.1	-	lincRNA	KNOWN	CTD-2227C6.2	1	1	-0.616959
chr5	83049376	83050964	83050170	ENSG00000271862.1	-	lincRNA	KNOWN	RP11-343L5.2	1	1	-0.222780
chr5	83052846	83077863	83065354	ENSG00000174695.9	-	protein_coding	KNOWN	TMEM167A	6	5	-0.108453
chr5	83064204	83064337	83064270	ENSG00000238835.1	-	snoRNA	KNOWN	SCARNA18	1	1	-0.184662
chr5	83077498	83353787	83215642	ENSG00000152422.15	+	protein_coding	KNOWN	XRCC4	6	8	-0.339075
chr5	83201229	83202141	83201685	ENSG00000243385.2	+	processed_pseudogene	KNOWN	CTD-2110K23.1	1	2	-0.449309
chr5	83279921	83280644	83280282	ENSG00000251552.1	-	processed_pseudogene	KNOWN	COQ10BP2	1	1	-0.241618
chr5	83426676	83427030	83426853	ENSG00000251395.1	+	processed_pseudogene	KNOWN	FTH1P9	1	1	-0.349135
chr5	83471465	83582303	83526884	ENSG00000038427.15	+	protein_coding	KNOWN	VCAN	12	15	-0.343728
chr5	83531352	83581320	83556336	ENSG00000249835.2	-	antisense	KNOWN	VCAN-AS1	2	3	-0.334890
chr5	83593344	83593472	83593408	ENSG00000281872.1	+	miRNA	NOVEL	AC020921.1	1	1	-0.667649
chr5	83637805	83721613	83679709	ENSG00000145681.10	-	protein_coding	KNOWN	HAPLN1	7	5	-0.397370
chr5	83685866	83686018	83685942	ENSG00000253073.1	+	misc_RNA	KNOWN	RN7SKP295	1	1	-0.399620
chr5	83703448	83703543	83703495	ENSG00000206744.1	+	snRNA	KNOWN	RNU6-620P	1	1	-0.563792
chr5	83746388	83746989	83746688	ENSG00000242858.1	-	processed_pseudogene	KNOWN	CTC-484M2.1	1	1	-0.106422
chr5	83803554	83803685	83803619	ENSG00000202157.1	+	snRNA	KNOWN	RNU4-11P	1	1	-0.560085
chr5	83875166	83875821	83875493	ENSG00000250013.1	-	processed_pseudogene	KNOWN	RP11-456A14.1	1	1	-0.570973
chr5	83940554	84384793	84162673	ENSG00000164176.12	-	protein_coding	KNOWN	EDIL3	4	11	-0.520609
chr5	83973796	83973886	83973841	ENSG00000216125.2	-	miRNA	NOVEL	AC109496.1	1	1	-1.159141
chr5	84196883	84196989	84196936	ENSG00000252861.1	+	snRNA	KNOWN	RNU6-448P	1	1	-0.621295
chr5	84384427	84490765	84437596	ENSG00000250320.5	+	antisense	KNOWN	CTD-2269F5.1	5	5	-0.463635
chr5	84999812	85000315	85000063	ENSG00000214853.5	-	processed_pseudogene	KNOWN	RP11-509M23.1	1	1	-0.821131
chr5	85112342	85112756	85112549	ENSG00000249349.1	-	lincRNA	KNOWN	CTC-384G19.1	1	1	-0.450535
chr5	85190629	85190830	85190729	ENSG00000248674.1	-	processed_pseudogene	KNOWN	RBBP4P6	1	1	-0.676338
chr5	85210060	85210903	85210481	ENSG00000250253.3	-	processed_pseudogene	KNOWN	RP11-1072N2.2	1	2	-0.829153
chr5	85212958	85213614	85213286	ENSG00000249792.1	-	lincRNA	KNOWN	RP11-1072N2.3	1	1	-0.829153
chr5	85237681	85238074	85237877	ENSG00000248170.1	-	processed_pseudogene	KNOWN	RP11-1072N2.4	1	2	-0.738950
chr5	85420028	85420451	85420239	ENSG00000248667.1	-	lincRNA	KNOWN	CTD-2331D11.2	1	1	-0.736242
chr5	85429702	85430184	85429943	ENSG00000249023.1	+	lincRNA	KNOWN	CTD-2331D11.3	1	1	-0.534884
chr5	85446974	85447758	85447366	ENSG00000249842.1	+	lincRNA	KNOWN	CTD-2331D11.4	1	1	-0.211624
chr5	85464434	85465310	85464872	ENSG00000243859.3	+	processed_pseudogene	KNOWN	RPL5P17	1	1	-0.393435
chr5	85528044	85528134	85528089	ENSG00000215953.1	-	miRNA	NOVEL	AC026700.1	1	1	-0.955314
chr5	85549409	85549952	85549680	ENSG00000251066.1	+	processed_pseudogene	KNOWN	CTC-534B23.1	1	1	-1.022179
chr5	85663232	85664684	85663958	ENSG00000250874.1	+	lincRNA	KNOWN	CTC-480C2.1	1	1	-0.750467
chr5	85762559	85763138	85762848	ENSG00000241965.2	+	processed_pseudogene	KNOWN	RPS2P25	1	1	-0.616545
chr5	85848502	85849199	85848850	ENSG00000249153.1	+	lincRNA	KNOWN	CTD-2036A18.2	1	1	-0.767527
chr5	86087526	86087847	86087686	ENSG00000250359.1	+	processed_pseudogene	KNOWN	PTP4A1P4	1	1	-0.524680
chr5	86282460	86296463	86289461	ENSG00000205449.11	+	transcribed_unprocessed_pseudogene	KNOWN	NBPF22P	2	9	-0.206162
chr5	86305233	86306149	86305691	ENSG00000280009.1	-	TEC	KNOWN	CTD-2123J17.2	1	1	-0.143636
chr5	86335024	86335808	86335416	ENSG00000248195.1	+	lincRNA	KNOWN	CTC-261N6.3	1	1	-0.876981
chr5	86353803	86368854	86361328	ENSG00000248363.5	+	lincRNA	KNOWN	CTC-261N6.1	2	3	-0.933245
chr5	86380660	86381426	86381043	ENSG00000250124.1	-	lincRNA	KNOWN	CTC-261N6.2	1	1	-0.939486
chr5	86402465	86402960	86402712	ENSG00000251585.1	+	processed_pseudogene	KNOWN	CTD-2299E8.1	1	1	-0.625608
chr5	86617904	86620962	86619433	ENSG00000127184.10	+	protein_coding	KNOWN	COX7C	7	4	-0.471909
chr5	86663144	86663250	86663197	ENSG00000207013.1	-	snRNA	KNOWN	RNU6-804P	1	1	-0.576387
chr5	86746818	86749772	86748295	ENSG00000250544.1	+	lincRNA	KNOWN	CTC-493L21.1	2	3	-0.266903
chr5	86797685	86800280	86798982	ENSG00000248701.1	+	lincRNA	KNOWN	CTC-493L21.2	1	2	-0.908008
chr5	86884231	86884881	86884556	ENSG00000242477.1	-	processed_pseudogene	KNOWN	CTD-2161E19.1	1	1	-0.864065
chr5	86967321	87137712	87052516	ENSG00000249061.1	+	lincRNA	KNOWN	RP11-72L22.1	2	3	-0.245191
chr5	87102603	87102846	87102724	ENSG00000251951.1	-	misc_RNA	KNOWN	RN7SKP34	1	1	0.110607
chr5	87114879	87114954	87114916	ENSG00000265919.1	-	miRNA	KNOWN	MIR4280	1	1	-0.104597
chr5	87205408	87240145	87222776	ENSG00000233828.3	-	lincRNA	KNOWN	CTC-242N15.1	2	2	-0.086584
chr5	87267888	87391931	87329909	ENSG00000145715.14	+	protein_coding	KNOWN	RASA1	6	26	-0.297734
chr5	87294189	87294473	87294331	ENSG00000241243.3	-	misc_RNA	KNOWN	RN7SL629P	1	1	-0.245509
chr5	87299687	87299797	87299742	ENSG00000207452.1	-	snRNA	KNOWN	RNU6-606P	1	1	-0.245509
chr5	87376256	87377180	87376718	ENSG00000272367.1	-	antisense	KNOWN	CTC-428H11.2	1	1	-0.484200
chr5	87391494	87413019	87402256	ENSG00000134480.13	-	protein_coding	KNOWN	CCNH	10	9	-0.076311
chr5	87420341	87420447	87420394	ENSG00000200462.1	-	snRNA	KNOWN	RNU6-727P	1	1	-0.098111
chr5	87662042	87679147	87670594	ENSG00000249362.1	+	lincRNA	KNOWN	CTD-2316B1.1	1	2	-0.975026
chr5	87713135	87733269	87723202	ENSG00000248708.1	-	lincRNA	KNOWN	CTD-2316B1.2	1	3	-0.488998
chr5	88189633	88269476	88229554	ENSG00000164180.13	-	protein_coding	KNOWN	TMEM161B	15	13	-0.415903
chr5	88268895	88436685	88352790	ENSG00000247828.7	+	antisense	KNOWN	TMEM161B-AS1	13	8	-0.449677
chr5	88274258	88274376	88274317	ENSG00000207129.1	-	rRNA	KNOWN	RNA5SP187	1	1	-0.391824
chr5	88381957	88382725	88382341	ENSG00000240083.2	+	processed_pseudogene	KNOWN	RPS3AP22	1	1	-0.669848
chr5	88382772	88382907	88382839	ENSG00000206958.1	+	snoRNA	NOVEL	SNORA70	1	1	-0.669848
chr5	88382948	88383260	88383104	ENSG00000250306.1	+	processed_pseudogene	KNOWN	CTC-498M16.3	1	1	-0.669848
chr5	88408982	88439090	88424036	ENSG00000250156.3	-	lincRNA	KNOWN	CTC-498M16.2	2	6	-0.410607
chr5	88433892	88498697	88466294	ENSG00000271904.1	-	lincRNA	KNOWN	CTC-498M16.4	1	2	-0.599111
chr5	88507546	88691041	88599293	ENSG00000245526.8	-	lincRNA	KNOWN	LINC00461	16	7	-0.514518
chr5	88602780	88603117	88602948	ENSG00000250705.1	+	processed_pseudogene	KNOWN	CTC-470C15.1	1	1	-0.335429
chr5	88666853	88666939	88666896	ENSG00000273878.1	-	miRNA	KNOWN	MIR9-2	1	1	-0.811046
chr5	88676218	88722831	88699524	ENSG00000245864.2	+	antisense	KNOWN	CTC-467M3.1	1	4	-0.260489
chr5	88692645	88693972	88693308	ENSG00000250377.1	-	lincRNA	KNOWN	CTC-467M3.3	1	2	0.047598
chr5	88692651	88692859	88692755	ENSG00000250555.2	+	antisense	KNOWN	CTC-467M3.2	1	2	0.047598
chr5	88717117	88904257	88810687	ENSG00000081189.13	-	protein_coding	KNOWN	MEF2C	34	12	-0.355999
chr5	88883328	89466398	89174863	ENSG00000248309.5	+	antisense	KNOWN	MEF2C-AS1	14	7	-0.546239
chr5	89466537	89470039	89468288	ENSG00000250831.1	-	lincRNA	KNOWN	CTD-2232E5.2	1	2	-0.547013
chr5	89581209	89677701	89629455	ENSG00000250437.1	+	lincRNA	KNOWN	RP11-116A1.1	1	2	-0.461055
chr5	89749398	89749502	89749450	ENSG00000277793.1	-	miRNA	NOVEL	AC112179.1	1	1	-0.595069
chr5	89900664	89904908	89902786	ENSG00000214942.4	+	lincRNA	KNOWN	AC113167.1	1	2	-0.750467
chr5	89944910	89947573	89946241	ENSG00000249265.1	+	lincRNA	KNOWN	AC113167.2	1	2	-0.799859
chr5	90016621	90016731	90016676	ENSG00000264342.2	-	miRNA	KNOWN	MIR3660	1	1	-0.743779
chr5	90158339	90290071	90224205	ENSG00000248555.6	-	processed_transcript	KNOWN	LINC01339	4	6	-0.473366
chr5	90353037	90356609	90354823	ENSG00000253321.1	-	lincRNA	KNOWN	RP11-61G23.2	1	2	-0.432088
chr5	90388468	90389363	90388915	ENSG00000260871.1	-	sense_overlapping	KNOWN	CTD-2373J6.1	1	1	-0.501099
chr5	90392261	90409786	90401023	ENSG00000153140.8	-	protein_coding	KNOWN	CETN3	6	6	-0.739032
chr5	90410000	90410669	90410334	ENSG00000255647.3	+	processed_transcript	KNOWN	CTD-2373J6.2	2	2	-0.225623
chr5	90458203	90474768	90466485	ENSG00000176055.9	-	protein_coding	KNOWN	MBLAC2	2	2	-0.246119
chr5	90471748	90514553	90493150	ENSG00000113356.10	+	protein_coding	KNOWN	POLR3G	8	9	-0.239874
chr5	90515611	90529584	90522597	ENSG00000176018.12	-	protein_coding	KNOWN	LYSMD3	4	4	-0.439531
chr5	90529344	91164221	90846782	ENSG00000164199.15	+	protein_coding	KNOWN	ADGRV1	11	90	-0.508935
chr5	90860616	90860727	90860671	ENSG00000276922.1	-	miRNA	NOVEL	AC099512.1	1	1	-0.435746
chr5	91030990	91031307	91031148	ENSG00000249514.1	-	processed_pseudogene	KNOWN	CTD-2266L18.1	1	1	-0.637154
chr5	91223419	91223967	91223693	ENSG00000212930.3	+	lincRNA	KNOWN	RP11-414H23.2	1	1	0.083480
chr5	91226475	91227071	91226773	ENSG00000251093.1	-	lincRNA	KNOWN	RP11-414H23.3	1	1	0.083480
chr5	91270727	91270867	91270797	ENSG00000199643.1	+	snRNA	KNOWN	RNU4-90P	1	1	-0.125426
chr5	91280097	91281142	91280619	ENSG00000234292.3	-	lincRNA	KNOWN	RP11-213H15.1	1	1	-0.125426
chr5	91303029	91314402	91308715	ENSG00000248323.5	-	lincRNA	KNOWN	LUCAT1	3	5	-0.171670
chr5	91313057	91314402	91313729	ENSG00000271762.1	-	lincRNA	KNOWN	RP11-213H15.4	1	4	0.165158
chr5	91314716	91314997	91314856	ENSG00000277001.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.165158
chr5	91354478	91354934	91354706	ENSG00000240388.2	+	processed_pseudogene	KNOWN	CTD-2061E19.1	1	1	0.182965
chr5	91355380	91356026	91355703	ENSG00000241059.2	+	antisense	KNOWN	CTD-2061E19.6	1	1	0.182965
chr5	91368724	91383359	91376041	ENSG00000113369.8	-	protein_coding	KNOWN	ARRDC3	7	8	-0.273683
chr5	91380349	91439085	91409717	ENSG00000281357.2	+	lincRNA	KNOWN	ARRDC3-AS1	3	3	-0.224673
chr5	91476382	91477018	91476700	ENSG00000251356.1	+	processed_pseudogene	KNOWN	RAB5CP2	1	1	-0.489179
chr5	91843687	91844529	91844108	ENSG00000248826.2	-	processed_pseudogene	KNOWN	PCBP2P3	1	1	-0.422581
chr5	91844022	91844116	91844069	ENSG00000276426.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.422581
chr5	92082597	92479426	92281011	ENSG00000250049.5	+	lincRNA	KNOWN	RP11-348J24.2	2	5	-0.464155
chr5	92329230	92332584	92330907	ENSG00000248864.1	+	lincRNA	KNOWN	RP11-348J24.1	1	2	-0.583208
chr5	92405941	92406044	92405992	ENSG00000264489.2	-	miRNA	NOVEL	AC120120.1	1	1	-0.422581
chr5	92410256	92660863	92535559	ENSG00000249776.5	-	lincRNA	KNOWN	RP11-133F8.2	3	4	-0.484199
chr5	92654848	92679141	92666994	ENSG00000249169.1	+	lincRNA	KNOWN	CTC-529L17.1	2	2	-0.670215
chr5	92675956	92688254	92682105	ENSG00000249984.1	-	lincRNA	KNOWN	CTC-529L17.2	1	2	-0.650676
chr5	92826255	92844004	92835129	ENSG00000248588.1	+	lincRNA	KNOWN	CTC-458G6.4	1	2	-0.027060
chr5	92840807	92841628	92841217	ENSG00000248950.1	-	processed_pseudogene	KNOWN	LDHBP3	1	1	0.122853
chr5	92889387	92890840	92890113	ENSG00000249958.1	-	processed_pseudogene	KNOWN	CCT7P2	1	1	-0.381081
chr5	92907180	92939591	92923385	ENSG00000248528.1	-	lincRNA	KNOWN	CTC-458G6.2	1	4	-0.473266
chr5	93019663	93068669	93044166	ENSG00000251361.1	-	lincRNA	KNOWN	CTD-2091N23.1	1	3	-0.441679
chr5	93267429	93268425	93267927	ENSG00000213730.3	+	processed_pseudogene	KNOWN	POLD2P1	1	1	-0.470603
chr5	93409359	93585648	93497503	ENSG00000237187.8	-	antisense	KNOWN	NR2F1-AS1	14	9	-0.123972
chr5	93583337	93594615	93588976	ENSG00000175745.11	+	protein_coding	KNOWN	NR2F1	5	4	0.220563
chr5	93600357	93603598	93601977	ENSG00000278905.1	+	TEC	KNOWN	RP11-65F13.3	1	1	0.303911
chr5	93618069	94111699	93864884	ENSG00000113391.16	-	protein_coding	KNOWN	FAM172A	9	11	-0.404492
chr5	93620696	93620788	93620742	ENSG00000251725.1	-	miRNA	KNOWN	MIR2277	1	1	-0.776097
chr5	93682838	93683667	93683252	ENSG00000249353.2	-	processed_pseudogene	KNOWN	NPM1P27	1	1	-0.245043
chr5	93734806	93741637	93738221	ENSG00000248483.5	-	protein_coding	KNOWN	POU5F2	2	1	-0.332264
chr5	93741640	93743500	93742570	ENSG00000272406.1	+	lincRNA	KNOWN	RP11-185E12.2	1	2	-0.332264
chr5	93860669	93863825	93862247	ENSG00000251023.1	-	sense_intronic	KNOWN	RP11-549J18.1	1	1	-0.485666
chr5	94152966	94618604	94385785	ENSG00000185261.13	-	protein_coding	KNOWN	KIAA0825	4	20	-0.463964
chr5	94567461	94568909	94568185	ENSG00000251544.1	+	processed_pseudogene	KNOWN	MTND5P12	1	1	-0.386662
chr5	94568929	94569470	94569199	ENSG00000254132.1	-	processed_pseudogene	KNOWN	MTND6P3	1	1	-0.386662
chr5	94569540	94570676	94570108	ENSG00000251340.1	+	processed_pseudogene	KNOWN	RP11-461G12.2	1	1	-0.293261
chr5	94592771	94594791	94593781	ENSG00000232578.4	+	processed_pseudogene	KNOWN	CTC-303L1.1	1	1	-0.197515
chr5	94611906	94618122	94615014	ENSG00000270133.1	-	sense_intronic	KNOWN	CTC-303L1.2	1	3	-0.492971
chr5	94618347	94739436	94678891	ENSG00000133302.12	+	protein_coding	KNOWN	SLF1	8	21	-0.379875
chr5	94703741	95284575	94994158	ENSG00000175471.19	-	protein_coding	KNOWN	MCTP1	18	23	-0.491799
chr5	94788789	94793599	94791194	ENSG00000249175.1	+	antisense	KNOWN	CTC-484P3.3	1	4	-0.540686
chr5	94825961	94826694	94826327	ENSG00000243806.1	-	processed_pseudogene	KNOWN	RPL7P18	1	1	-0.387751
chr5	94877599	94877777	94877688	ENSG00000276514.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.898485
chr5	94979151	94980893	94980022	ENSG00000249545.1	+	antisense	KNOWN	CTC-558O19.1	1	2	-0.782477
chr5	95391344	95450454	95420899	ENSG00000153347.9	+	protein_coding	KNOWN	FAM81B	9	11	-0.347182
chr5	95440044	95440687	95440365	ENSG00000225165.3	+	processed_pseudogene	KNOWN	CTD-2538A21.1	1	1	-0.273658
chr5	95463895	95555007	95509451	ENSG00000198677.10	-	protein_coding	KNOWN	TTC37	15	43	-0.208125
chr5	95521369	95521475	95521422	ENSG00000212259.1	+	snRNA	KNOWN	RNU6-308P	1	1	-0.271972
chr5	95555074	95605064	95580069	ENSG00000164291.16	+	protein_coding	KNOWN	ARSK	5	9	-0.219764
chr5	95608159	95608259	95608209	ENSG00000274992.1	-	miRNA	NOVEL	AC008547.1	1	1	-0.089249
chr5	95620078	95622142	95621110	ENSG00000178015.4	+	protein_coding	KNOWN	GPR150	1	1	0.206762
chr5	95646754	95684773	95665763	ENSG00000175449.13	+	protein_coding	KNOWN	RFESD	8	6	-0.074583
chr5	95652181	95698711	95675446	ENSG00000145757.15	-	protein_coding	KNOWN	SPATA9	6	9	-0.117186
chr5	95701249	95732295	95716772	ENSG00000250240.5	-	antisense	KNOWN	CTD-2154I11.2	2	4	-0.031749
chr5	95713522	95824383	95768952	ENSG00000164292.12	+	protein_coding	KNOWN	RHOBTB3	16	12	0.111719
chr5	95751319	95823005	95787162	ENSG00000173221.13	-	protein_coding	KNOWN	GLRX	7	4	0.122512
chr5	95768999	95770700	95769849	ENSG00000251348.1	+	processed_pseudogene	KNOWN	HSPD1P11	1	1	0.063322
chr5	95834424	95835046	95834735	ENSG00000251000.1	-	processed_pseudogene	KNOWN	AC008592.3	1	2	0.347453
chr5	95835943	95852721	95844332	ENSG00000251409.1	-	lincRNA	KNOWN	AC008592.4	1	2	0.365700
chr5	95849309	95849855	95849582	ENSG00000272021.1	+	lincRNA	KNOWN	AC008592.8	1	1	0.347453
chr5	95852232	95860133	95856182	ENSG00000236882.7	+	lincRNA	KNOWN	LINC01554	3	4	0.459925
chr5	95861786	95874519	95868152	ENSG00000250362.1	+	processed_transcript	KNOWN	AC008592.5	2	3	0.383546
chr5	95885098	95962071	95923584	ENSG00000118985.15	-	protein_coding	KNOWN	ELL2	8	12	0.113873
chr5	95962001	96631085	96296543	ENSG00000251314.2	+	antisense	KNOWN	CTD-2337A12.1	3	5	-0.046082
chr5	95964999	95986311	95975655	ENSG00000250955.1	-	lincRNA	KNOWN	AC008592.7	1	4	0.185212
chr5	95973041	95973446	95973243	ENSG00000213716.3	-	processed_pseudogene	KNOWN	FABP5P5	1	1	0.224442
chr5	96050115	96215519	96132817	ENSG00000250551.1	+	lincRNA	KNOWN	RP11-254I22.1	1	3	0.087170
chr5	96079138	96079212	96079175	ENSG00000207578.1	+	miRNA	KNOWN	MIR583	1	1	0.449314
chr5	96210121	96210227	96210174	ENSG00000206997.1	-	snRNA	KNOWN	RNU6-524P	1	1	-0.294287
chr5	96213346	96215075	96214210	ENSG00000249746.1	-	lincRNA	KNOWN	RP11-254I22.3	1	2	-0.294287
chr5	96247776	96278751	96263263	ENSG00000250158.1	+	lincRNA	KNOWN	RP11-254I22.2	1	2	-0.139497
chr5	96390415	96434143	96412279	ENSG00000175426.10	-	protein_coding	KNOWN	PCSK1	4	14	0.084843
chr5	96525267	96779595	96652431	ENSG00000153113.23	+	protein_coding	KNOWN	CAST	44	32	-0.019891
chr5	96590192	96590276	96590234	ENSG00000238518.1	-	miRNA	NOVEL	AC020900.1	1	1	0.051803
chr5	96741079	96742698	96741888	ENSG00000249180.1	-	antisense	KNOWN	CTC-506B8.1	1	2	-0.318096
chr5	96760810	96808100	96784455	ENSG00000164307.12	-	protein_coding	KNOWN	ERAP1	9	20	-0.155782
chr5	96784777	96785999	96785388	ENSG00000248734.2	+	antisense	KNOWN	CTD-2260A17.1	2	2	-0.328340
chr5	96802960	96803102	96803031	ENSG00000281288.1	+	miRNA	NOVEL	AC008906.1	1	1	0.057640
chr5	96804353	96806105	96805229	ENSG00000272109.1	+	antisense	KNOWN	CTD-2260A17.3	2	2	0.057640
chr5	96814028	96935809	96874918	ENSG00000247121.6	-	antisense	KNOWN	CTD-2260A17.2	4	4	0.046051
chr5	96875939	96919716	96897827	ENSG00000164308.16	+	protein_coding	KNOWN	ERAP2	11	19	-0.069610
chr5	96935394	97037515	96986454	ENSG00000113441.15	+	protein_coding	KNOWN	LNPEP	5	18	-0.156198
chr5	96942299	96943184	96942741	ENSG00000227836.1	+	processed_pseudogene	KNOWN	AC008850.3	1	2	0.083909
chr5	96962656	96962757	96962706	ENSG00000200884.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.117832
chr5	97056402	97057358	97056880	ENSG00000213701.4	-	processed_pseudogene	KNOWN	SETP22	1	1	-0.363310
chr5	97089075	97437217	97263146	ENSG00000251513.2	+	lincRNA	KNOWN	CTD-2215E18.1	1	7	-0.311292
chr5	97091175	97091303	97091239	ENSG00000281286.1	+	miRNA	NOVEL	AC008865.1	1	1	-0.335429
chr5	97091867	97142872	97117369	ENSG00000145721.11	-	protein_coding	KNOWN	LIX1	2	6	-0.184591
chr5	97160867	97183260	97172063	ENSG00000058729.10	-	protein_coding	KNOWN	RIOK2	7	10	-0.428481
chr5	97175950	97176113	97176031	ENSG00000206698.1	-	snRNA	KNOWN	RNU1-73P	1	1	-0.350952
chr5	97188090	97201880	97194985	ENSG00000248758.1	-	antisense	KNOWN	CTD-2215E18.2	1	2	-0.381949
chr5	97223371	97227957	97225664	ENSG00000251054.1	-	lincRNA	KNOWN	CTD-2215E18.3	1	2	-0.344648
chr5	97336858	97337040	97336949	ENSG00000249761.1	-	processed_pseudogene	KNOWN	CTD-2278B20.1	1	1	-0.373300
chr5	97368776	97370421	97369598	ENSG00000251389.1	+	processed_pseudogene	KNOWN	YTHDF1P1	1	1	-0.246282
chr5	97449358	97449741	97449549	ENSG00000249977.1	-	processed_pseudogene	KNOWN	RP11-155G15.3	1	1	-0.474355
chr5	97504696	97671046	97587871	ENSG00000250331.1	+	lincRNA	KNOWN	LINC01340	1	4	-0.369253
chr5	97677547	97678681	97678114	ENSG00000248931.1	-	processed_pseudogene	KNOWN	RP11-72K17.2	1	1	-0.488383
chr5	97737894	97738913	97738403	ENSG00000251193.1	+	processed_pseudogene	KNOWN	RP11-72K17.1	1	1	-0.453004
chr5	97881420	97922695	97902057	ENSG00000248202.1	+	lincRNA	KNOWN	RP11-455B3.1	2	2	-0.465695
chr5	98025965	98026139	98026052	ENSG00000249101.1	+	processed_pseudogene	KNOWN	AC008834.2	1	1	-0.576802
chr5	98086260	98161193	98123726	ENSG00000248901.1	-	lincRNA	KNOWN	AC008834.1	1	5	-0.320571
chr5	98203059	98205193	98204126	ENSG00000249135.1	+	processed_pseudogene	KNOWN	RP11-274E7.1	1	2	-0.316288
chr5	98213402	98214121	98213761	ENSG00000238000.1	+	processed_pseudogene	KNOWN	RP11-274E7.2	1	1	-0.353246
chr5	98338744	98339832	98339288	ENSG00000176183.8	+	processed_pseudogene	KNOWN	CH17-12M21.1	1	1	-0.229936
chr5	98392070	98393530	98392800	ENSG00000250221.1	-	processed_pseudogene	KNOWN	KRT8P32	1	1	-0.169395
chr5	98402542	98402732	98402637	ENSG00000250830.1	-	processed_pseudogene	KNOWN	MRPS35P2	1	1	-0.169395
chr5	98409675	98410100	98409887	ENSG00000249990.1	-	processed_pseudogene	KNOWN	RP11-474J18.2	1	1	-0.185582
chr5	98410235	98411792	98411013	ENSG00000249448.1	-	processed_pseudogene	KNOWN	MTCO1P24	1	1	-0.237510
chr5	98576341	98577260	98576800	ENSG00000251102.1	+	processed_pseudogene	KNOWN	CTBP2P4	1	1	-0.202751
chr5	98639097	98639231	98639164	ENSG00000223053.1	-	miRNA	NOVEL	AC022142.1	1	1	-0.398536
chr5	98679402	98681367	98680384	ENSG00000251553.1	+	processed_pseudogene	KNOWN	CTC-463N11.1	1	1	-0.436557
chr5	98768650	98798643	98783646	ENSG00000174136.11	+	protein_coding	KNOWN	RGMB	7	5	0.023955
chr5	98769618	98773469	98771543	ENSG00000246763.6	-	antisense	KNOWN	RGMB-AS1	5	3	0.010193
chr5	98792863	98795766	98794314	ENSG00000279232.1	-	protein_coding	KNOWN	AC008522.1	1	1	0.025564
chr5	98833382	98833711	98833546	ENSG00000250162.1	+	processed_pseudogene	KNOWN	CSNK1A1P3	1	1	-0.408621
chr5	98853985	98928957	98891471	ENSG00000153922.10	-	protein_coding	KNOWN	CHD1	12	36	-0.289924
chr5	98889731	98889833	98889782	ENSG00000222610.1	+	snRNA	KNOWN	RNU6-402P	1	1	-0.232137
chr5	98929171	98995013	98962092	ENSG00000248489.1	+	lincRNA	KNOWN	CTD-2007H13.3	1	3	-0.067735
chr5	98936638	98936747	98936692	ENSG00000200351.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.023512
chr5	98954394	98954972	98954683	ENSG00000241597.2	+	processed_pseudogene	KNOWN	CTD-2007H13.1	1	1	0.017991
chr5	99489559	99499367	99494463	ENSG00000249444.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-93O17.1	2	2	-0.575755
chr5	99522311	99525462	99523886	ENSG00000206356.5	-	processed_pseudogene	KNOWN	RP11-93O17.2	1	1	0.015540
chr5	99532628	99534611	99533619	ENSG00000227762.4	+	unprocessed_pseudogene	KNOWN	GUSBP8	1	4	-0.257697
chr5	99549432	99577957	99563694	ENSG00000249515.1	+	lincRNA	KNOWN	CTD-2151A2.1	1	2	-0.837147
chr5	99594329	99594740	99594534	ENSG00000248236.1	-	processed_pseudogene	KNOWN	CTD-2151A2.2	1	1	-0.752357
chr5	99594880	99595297	99595088	ENSG00000248928.1	+	processed_pseudogene	KNOWN	CTD-2151A2.3	1	1	-0.752357
chr5	99948295	99949583	99948939	ENSG00000250391.1	-	processed_pseudogene	KNOWN	CTD-2160D9.1	1	1	-0.769032
chr5	99996547	99997932	99997239	ENSG00000249963.1	+	processed_pseudogene	KNOWN	EEF1A1P20	1	1	-0.076690
chr5	100021804	100021906	100021855	ENSG00000199378.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.830472
chr5	100045928	100046374	100046151	ENSG00000270232.1	-	processed_pseudogene	KNOWN	MTCYBP22	1	1	-0.705964
chr5	100046450	100046970	100046710	ENSG00000270230.1	+	processed_pseudogene	KNOWN	MTND6P22	1	1	-0.705964
chr5	100046977	100048785	100047881	ENSG00000271687.1	-	processed_pseudogene	KNOWN	MTND5P10	1	1	-0.705964
chr5	100048988	100050362	100049675	ENSG00000270906.1	-	processed_pseudogene	KNOWN	MTND4P35	1	1	-0.548922
chr5	100050359	100050650	100050504	ENSG00000270350.1	-	processed_pseudogene	KNOWN	MTND4LP5	1	1	-0.111542
chr5	100050365	100050438	100050401	ENSG00000264839.1	+	miRNA	NOVEL	AC113407.1	1	1	-0.111542
chr5	100050719	100051063	100050891	ENSG00000271480.1	-	processed_pseudogene	KNOWN	RP11-475J5.10	1	1	-0.111542
chr5	100051133	100051916	100051524	ENSG00000270388.1	-	processed_pseudogene	KNOWN	RP11-475J5.8	1	1	-0.111542
chr5	100051920	100052597	100052258	ENSG00000270307.1	-	processed_pseudogene	KNOWN	MTATP6P2	1	1	-0.111542
chr5	100052859	100053539	100053199	ENSG00000270225.1	-	processed_pseudogene	KNOWN	RP11-475J5.4	1	1	-0.111542
chr5	100053686	100055045	100054365	ENSG00000271207.1	-	processed_pseudogene	KNOWN	MTCO1P22	1	1	-0.111542
chr5	100062275	100067954	100065114	ENSG00000274455.1	-	unprocessed_pseudogene	KNOWN	CTD-2012B7.1	1	5	-0.111542
chr5	100153672	100153779	100153725	ENSG00000207077.1	+	snRNA	KNOWN	RNU6-1119P	1	1	-0.917227
chr5	100375700	100381398	100378549	ENSG00000275374.1	-	unprocessed_pseudogene	KNOWN	RP11-346J10.2	1	5	-0.105948
chr5	100388853	100389938	100389395	ENSG00000273957.1	+	unprocessed_pseudogene	KNOWN	RP11-346J10.3	1	2	-0.105948
chr5	100401441	100408899	100405170	ENSG00000249787.1	+	lincRNA	KNOWN	RP11-346J10.1	1	3	0.301839
chr5	100449754	100535262	100492508	ENSG00000247877.6	-	lincRNA	KNOWN	CTD-2001C12.1	2	5	-0.674555
chr5	100535305	100586741	100561023	ENSG00000174132.8	+	protein_coding	KNOWN	FAM174A	3	3	-0.460686
chr5	100654112	100657970	100656041	ENSG00000250806.2	-	lincRNA	KNOWN	CTC-293G12.1	1	3	-0.216958
chr5	100733058	100733386	100733222	ENSG00000207269.1	+	misc_RNA	KNOWN	RN7SKP62	1	1	-0.781096
chr5	100806935	100903266	100855100	ENSG00000113532.12	-	protein_coding	KNOWN	ST8SIA4	4	5	-0.714567
chr5	100816482	100816565	100816523	ENSG00000221263.1	-	miRNA	KNOWN	MIR548P	1	1	-0.667000
chr5	101288712	101288821	101288766	ENSG00000277212.1	+	miRNA	NOVEL	AC116311.1	1	1	-0.658030
chr5	101581830	101582128	101581979	ENSG00000277506.1	+	misc_RNA	KNOWN	RN7SL802P	1	1	-0.608448
chr5	101816475	101816780	101816627	ENSG00000251261.4	-	unprocessed_pseudogene	KNOWN	OR7H2P	1	1	-0.735172
chr5	101976296	101976798	101976547	ENSG00000249495.1	+	processed_pseudogene	KNOWN	RP11-1152B5.1	1	1	-0.665258
chr5	102108666	102108764	102108715	ENSG00000277724.1	-	miRNA	NOVEL	AC106765.1	1	1	-0.505682
chr5	102131007	102131135	102131071	ENSG00000199786.1	-	rRNA	KNOWN	RNA5SP188	1	1	-0.577860
chr5	102144077	102146572	102145324	ENSG00000248261.1	+	lincRNA	KNOWN	CTD-2333K2.1	1	2	-0.577860
chr5	102233986	102296549	102265267	ENSG00000173930.8	-	protein_coding	KNOWN	SLCO4C1	1	13	-0.690889
chr5	102302504	102302810	102302657	ENSG00000222987.1	+	misc_RNA	KNOWN	RN7SKP68	1	1	-0.122133
chr5	102371782	102499016	102435399	ENSG00000205359.9	-	protein_coding	KNOWN	SLCO6A1	9	14	-0.572074
chr5	102500541	102505670	102503105	ENSG00000249017.1	+	antisense	KNOWN	RP11-58B2.1	2	2	-0.328226
chr5	102581368	102617589	102599478	ENSG00000250958.1	+	lincRNA	KNOWN	LINC00492	1	2	-0.605979
chr5	102605635	102606197	102605916	ENSG00000247402.2	+	lincRNA	KNOWN	CTD-2340E1.2	1	2	-0.488469
chr5	102609156	102671559	102640357	ENSG00000250682.5	-	lincRNA	KNOWN	LINC00491	4	4	-0.491774
chr5	102753981	103031105	102892543	ENSG00000145730.20	+	protein_coding	KNOWN	PAM	27	25	-0.331038
chr5	103032376	103033031	103032703	ENSG00000175749.11	+	processed_pseudogene	KNOWN	EIF3KP1	1	1	-0.447167
chr5	103086000	103120151	103103075	ENSG00000145723.16	-	protein_coding	KNOWN	GIN1	7	8	-0.358363
chr5	103120149	103212799	103166474	ENSG00000145725.19	+	protein_coding	KNOWN	PPIP5K2	17	33	-0.376003
chr5	103246048	103253519	103249783	ENSG00000248203.1	-	antisense	KNOWN	CTC-503K11.2	1	2	-0.255182
chr5	103258702	103278660	103268681	ENSG00000181751.9	+	protein_coding	KNOWN	C5orf30	3	3	-0.121274
chr5	103408941	103412511	103410726	ENSG00000250567.1	-	lincRNA	KNOWN	CTD-2154H6.1	1	2	0.095365
chr5	103430406	103526618	103478512	ENSG00000226926.6	-	unitary_pseudogene	KNOWN	PDZPH1P	2	10	-0.232129
chr5	103529676	103541985	103535830	ENSG00000248757.1	-	lincRNA	KNOWN	CTD-2193G5.1	1	4	-0.567945
chr5	103548855	103562793	103555824	ENSG00000112874.9	-	protein_coding	KNOWN	NUDT12	4	7	-0.223630
chr5	104079911	104105403	104092657	ENSG00000251026.1	+	lincRNA	KNOWN	RP11-138J23.1	1	5	-0.332618
chr5	104098874	104099038	104098956	ENSG00000201910.1	+	snRNA	KNOWN	RNU1-140P	1	1	-0.444509
chr5	104260531	104260826	104260678	ENSG00000239808.3	-	misc_RNA	KNOWN	RN7SL255P	1	1	-0.694302
chr5	104383298	105392970	104888134	ENSG00000251574.6	-	lincRNA	KNOWN	RP11-6N13.1	9	4	-0.662975
chr5	104434772	104435499	104435135	ENSG00000278958.1	+	TEC	KNOWN	RP11-313L6.2	1	1	-0.811500
chr5	104773641	104799772	104786706	ENSG00000253776.1	+	lincRNA	KNOWN	RP11-6N13.4	1	2	-0.668213
chr5	104780288	104780389	104780338	ENSG00000252881.1	-	snRNA	KNOWN	RNU6-334P	1	1	-0.709463
chr5	104917492	105246364	105081928	ENSG00000253584.1	-	lincRNA	KNOWN	CTD-2374C24.1	2	5	-0.681545
chr5	105099473	105100098	105099785	ENSG00000232159.3	+	processed_pseudogene	KNOWN	RAB9BP1	1	1	-0.793238
chr5	105922994	105923108	105923051	ENSG00000201790.1	-	rRNA	KNOWN	RNA5SP189	1	1	-0.527977
chr5	106415576	106417241	106416408	ENSG00000251204.1	-	processed_pseudogene	KNOWN	CTC-278L1.1	1	1	-0.754203
chr5	106543066	106544330	106543698	ENSG00000250145.1	-	processed_pseudogene	KNOWN	CTD-2285G11.1	1	1	-1.042101
chr5	106546665	106546803	106546734	ENSG00000252337.1	+	snoRNA	NOVEL	SNORA31	1	1	-1.042101
chr5	106815197	107011014	106913105	ENSG00000251027.1	-	lincRNA	KNOWN	CTC-254B4.1	2	4	-0.649447
chr5	107195156	107195332	107195244	ENSG00000250273.1	+	processed_pseudogene	KNOWN	PSMC1P5	1	1	-0.615226
chr5	107376889	107670895	107523892	ENSG00000184349.12	-	protein_coding	KNOWN	EFNA5	6	5	-0.406955
chr5	107699835	107716841	107708338	ENSG00000249959.5	-	lincRNA	KNOWN	RP11-252I13.2	2	5	-0.429830
chr5	107724961	107727117	107726039	ENSG00000248827.1	+	processed_pseudogene	KNOWN	RP11-252I13.1	1	1	-0.543597
chr5	107734773	107735066	107734919	ENSG00000239708.3	-	misc_RNA	KNOWN	RN7SL782P	1	1	-0.441227
chr5	107810629	107810924	107810776	ENSG00000251732.1	+	misc_RNA	KNOWN	RN7SKP122	1	1	-0.063463
chr5	107859035	108382098	108120566	ENSG00000145743.15	-	protein_coding	KNOWN	FBXL17	6	10	-0.370860
chr5	108593609	108593967	108593788	ENSG00000244245.1	+	processed_pseudogene	KNOWN	RP11-120B7.1	1	1	-0.790172
chr5	108727825	108728260	108728042	ENSG00000272523.1	-	lincRNA	KNOWN	LINC01023	1	1	-0.082506
chr5	108747822	109196841	108972331	ENSG00000151422.12	+	protein_coding	KNOWN	FER	10	20	-0.361935
chr5	108784098	108785552	108784825	ENSG00000249921.2	+	processed_pseudogene	KNOWN	CTC-329H14.1	1	2	-0.389135
chr5	108818041	108830790	108824415	ENSG00000250383.1	-	antisense	KNOWN	CTD-2197I11.1	1	2	0.048640
chr5	108891437	108891546	108891491	ENSG00000207404.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.306558
chr5	108894347	108894628	108894487	ENSG00000250441.1	-	processed_pseudogene	KNOWN	RP11-47F1.1	1	1	-0.306558
chr5	109014834	109014940	109014887	ENSG00000206593.1	-	snRNA	KNOWN	RNU6-47P	1	1	-0.303493
chr5	109051315	109052457	109051886	ENSG00000176857.5	-	processed_pseudogene	KNOWN	GJA1P1	1	1	-0.274136
chr5	109237120	109326369	109281744	ENSG00000249476.1	-	lincRNA	KNOWN	CTD-2587M2.1	1	4	-0.348251
chr5	109334709	109409994	109372351	ENSG00000198961.9	-	protein_coding	KNOWN	PJA2	4	10	-0.316715
chr5	109448349	109449063	109448706	ENSG00000248867.1	-	processed_pseudogene	KNOWN	CTD-2128F4.1	1	2	-0.255932
chr5	109467353	109467952	109467652	ENSG00000251367.1	+	lincRNA	KNOWN	RP11-231G15.2	1	1	-0.269516
chr5	109470843	109471586	109471214	ENSG00000248876.1	+	lincRNA	KNOWN	RP11-231G15.3	1	1	-0.538252
chr5	109497877	109499108	109498492	ENSG00000248440.1	+	lincRNA	KNOWN	RP11-231G15.1	1	2	-0.659695
chr5	109588338	109589592	109588965	ENSG00000214794.4	+	processed_pseudogene	KNOWN	KRT18P42	1	1	-0.378755
chr5	109672691	109672786	109672738	ENSG00000281444.1	-	miRNA	NOVEL	AC012603.2	1	1	-0.328851
chr5	109685580	109685692	109685636	ENSG00000266090.1	+	miRNA	NOVEL	AC012603.1	1	1	-0.328851
chr5	109687802	109688329	109688065	ENSG00000271849.1	-	lincRNA	KNOWN	CTC-332L22.1	1	1	-0.328851
chr5	109689366	109869625	109779495	ENSG00000112893.9	+	protein_coding	KNOWN	MAN2A1	6	22	-0.320992
chr5	109699500	109699834	109699667	ENSG00000202512.1	-	misc_RNA	KNOWN	RN7SKP230	1	1	-0.392042
chr5	109840128	109840692	109840410	ENSG00000249068.1	-	processed_pseudogene	KNOWN	CTC-287O8.1	1	1	-0.109215
chr5	109883182	109884751	109883966	ENSG00000254106.1	+	lincRNA	KNOWN	AC011366.3	1	3	-0.144448
chr5	109884610	109885423	109885016	ENSG00000253224.1	-	processed_pseudogene	KNOWN	PGAM5P1	1	1	-0.144448
chr5	110289233	110738956	110514094	ENSG00000186952.14	-	protein_coding	KNOWN	TMEM232	13	14	-0.485334
chr5	110513829	110513915	110513872	ENSG00000221436.1	-	miRNA	KNOWN	MIR548F3	1	1	-0.599886
chr5	110684794	110684927	110684860	ENSG00000207177.1	-	snoRNA	NOVEL	SNORA51	1	1	-0.462869
chr5	110738136	110765161	110751648	ENSG00000164209.16	+	protein_coding	KNOWN	SLC25A46	8	8	-0.281898
chr5	110908284	110908713	110908498	ENSG00000270779.1	+	processed_pseudogene	KNOWN	CTD-2026D23.1	1	1	-0.336542
chr5	110948029	110950780	110949404	ENSG00000248966.1	-	processed_pseudogene	KNOWN	BCLAF1P1	1	1	-0.465302
chr5	110970951	111008899	110989925	ENSG00000248428.1	-	lincRNA	KNOWN	CTC-551A13.1	1	6	-0.607177
chr5	110983563	110984466	110984014	ENSG00000251627.1	-	processed_pseudogene	KNOWN	CTD-2089O24.2	1	1	-0.636936
chr5	111070062	111078024	111074043	ENSG00000145777.14	+	protein_coding	KNOWN	TSLP	3	5	-0.503942
chr5	111076921	111092115	111084518	ENSG00000253613.2	-	antisense	KNOWN	CTC-551A13.2	1	4	-0.450225
chr5	111091716	111130502	111111109	ENSG00000134987.11	+	protein_coding	KNOWN	WDR36	6	23	-0.237026
chr5	111155244	111156152	111155698	ENSG00000250728.1	-	processed_pseudogene	KNOWN	AC010468.3	1	3	-0.315512
chr5	111192226	111193042	111192634	ENSG00000214784.4	-	processed_pseudogene	KNOWN	AC010468.1	1	1	-1.393435
chr5	111223653	111494886	111359269	ENSG00000152495.10	+	protein_coding	KNOWN	CAMK4	13	12	-0.408934
chr5	111265809	111270089	111267949	ENSG00000249318.1	-	antisense	KNOWN	AC010468.2	1	2	-0.177515
chr5	111277517	111302567	111290042	ENSG00000248268.1	-	antisense	KNOWN	CTC-499J9.1	1	3	-0.293452
chr5	111496033	111512590	111504311	ENSG00000164211.12	-	protein_coding	KNOWN	STARD4	12	6	-0.266455
chr5	111512226	111739726	111625976	ENSG00000246859.2	+	antisense	KNOWN	STARD4-AS1	2	7	-0.079255
chr5	111555895	111555980	111555937	ENSG00000221310.1	+	miRNA	NOVEL	AC008967.1	1	1	0.101840
chr5	111572102	111572239	111572170	ENSG00000249619.1	-	processed_pseudogene	KNOWN	HMGN1P13	1	1	-0.249045
chr5	111572236	111572398	111572317	ENSG00000251099.2	+	processed_pseudogene	KNOWN	CTD-2367A17.1	1	1	-0.249045
chr5	111662621	111997464	111830042	ENSG00000134986.13	-	protein_coding	KNOWN	NREP	23	6	0.001698
chr5	111719769	111720061	111719915	ENSG00000253057.1	-	misc_RNA	KNOWN	RN7SKP57	1	1	-0.043892
chr5	111846050	111846566	111846308	ENSG00000249439.1	-	processed_pseudogene	KNOWN	HMGN1P14	1	1	0.037544
chr5	111912508	112017309	111964908	ENSG00000250095.5	+	antisense	KNOWN	NREP-AS1	3	4	-0.071723
chr5	112142441	112419316	112280878	ENSG00000129595.12	-	protein_coding	KNOWN	EPB41L4A	11	23	-0.488060
chr5	112160526	112164276	112162401	ENSG00000224032.6	+	lincRNA	KNOWN	EPB41L4A-AS1	4	3	-0.142473
chr5	112161485	112161617	112161551	ENSG00000238363.1	+	snoRNA	KNOWN	SNORA13	1	1	-0.142473
chr5	112173570	112175548	112174559	ENSG00000250882.1	+	antisense	KNOWN	CTC-459M5.1	1	2	-0.320449
chr5	112192020	112210139	112201079	ENSG00000251187.5	+	antisense	KNOWN	CTC-459M5.2	3	4	-0.317269
chr5	112228283	112257309	112242796	ENSG00000251076.1	+	antisense	KNOWN	RP11-526F3.1	1	4	-0.517197
chr5	112363456	112363666	112363561	ENSG00000248350.1	-	processed_pseudogene	KNOWN	CTC-470E21.1	1	1	-0.492971
chr5	112419583	112420978	112420280	ENSG00000278921.2	+	lincRNA	KNOWN	EPB41L4A-AS2	2	1	-0.865364
chr5	112452703	112452989	112452846	ENSG00000248430.1	-	processed_pseudogene	KNOWN	HMGB3P16	1	1	-0.212402
chr5	112546973	112547505	112547239	ENSG00000251014.1	+	processed_pseudogene	KNOWN	RP11-159K7.1	1	1	-0.193629
chr5	112628436	112632100	112630268	ENSG00000250358.5	+	lincRNA	KNOWN	RP11-159K7.2	3	4	-0.180327
chr5	112707498	112846239	112776868	ENSG00000134982.16	+	protein_coding	KNOWN	APC	10	17	-0.220898
chr5	112777630	112778161	112777895	ENSG00000250045.2	-	processed_pseudogene	KNOWN	CBX3P3	1	1	-0.084039
chr5	112778363	112778469	112778416	ENSG00000212370.1	+	snRNA	KNOWN	RNU6-482P	1	1	-0.084039
chr5	112827213	112867582	112847397	ENSG00000258864.1	+	protein_coding	KNOWN	CTC-554D6.1	1	8	-0.179432
chr5	112861188	112893079	112877133	ENSG00000272869.5	+	protein_coding	KNOWN	CTC-487M23.8	4	5	-0.001885
chr5	112861222	112869788	112865505	ENSG00000153037.13	+	protein_coding	KNOWN	SRP19	8	5	-0.105689
chr5	112876379	112922539	112899459	ENSG00000129625.12	-	protein_coding	KNOWN	REEP5	7	6	0.133195
chr5	112885094	112885745	112885419	ENSG00000249947.2	+	processed_pseudogene	KNOWN	XBP1P1	1	1	0.031691
chr5	112891422	112893094	112892258	ENSG00000212643.2	+	protein_coding	KNOWN	ZRSR1	1	1	0.077041
chr5	112893333	112894001	112893667	ENSG00000270067.1	+	antisense	KNOWN	CTC-487M23.5	1	1	0.077041
chr5	112894933	112896531	112895732	ENSG00000279522.1	+	TEC	KNOWN	CTC-487M23.6	1	1	0.077041
chr5	112898023	112898371	112898197	ENSG00000272389.1	+	antisense	KNOWN	CTC-487M23.7	1	1	0.077041
chr5	112905638	112905737	112905687	ENSG00000266499.1	-	miRNA	NOVEL	AC008536.1	1	1	0.077041
chr5	112976702	113020970	112998836	ENSG00000172795.15	+	protein_coding	KNOWN	DCP2	8	11	0.051791
chr5	113022099	113488830	113255464	ENSG00000171444.17	-	protein_coding	KNOWN	MCC	10	19	-0.124184
chr5	113323028	113437174	113380101	ENSG00000232633.4	+	antisense	KNOWN	CTD-2201G3.1	2	5	-0.349280
chr5	113327765	113327857	113327811	ENSG00000277074.1	-	miRNA	NOVEL	AC126917.1	1	1	-0.126354
chr5	113432554	113435031	113433792	ENSG00000212122.3	-	protein_coding	KNOWN	TSSK1B	1	1	-0.113818
chr5	113493835	113493960	113493897	ENSG00000251741.1	+	snRNA	KNOWN	RNU4ATAC13P	1	1	0.034276
chr5	113513683	113595285	113554484	ENSG00000047188.15	+	protein_coding	KNOWN	YTHDC2	7	30	-0.525997
chr5	114056006	114057174	114056590	ENSG00000251628.1	+	lincRNA	KNOWN	RP11-371M22.1	1	2	-0.251310
chr5	114253513	114253754	114253633	ENSG00000222706.1	+	misc_RNA	KNOWN	RN7SKP89	1	1	0.145103
chr5	114360945	114496500	114428722	ENSG00000080709.14	+	protein_coding	KNOWN	KCNN2	9	9	-0.140526
chr5	114488997	114668410	114578703	ENSG00000246316.7	-	antisense	KNOWN	RP11-492A10.1	2	5	-0.417678
chr5	114576041	114579970	114578005	ENSG00000251542.1	+	lincRNA	KNOWN	CTC-313D10.1	1	2	-0.444061
chr5	115031273	115031894	115031583	ENSG00000251132.1	-	lincRNA	KNOWN	RP11-438C19.2	1	1	-0.252273
chr5	115087892	115088475	115088183	ENSG00000250242.1	-	lincRNA	KNOWN	RP11-438C19.1	1	1	-0.410509
chr5	115124762	115180546	115152654	ENSG00000152503.9	-	protein_coding	KNOWN	TRIM36	10	10	-0.383126
chr5	115148764	115149644	115149204	ENSG00000250472.1	-	sense_intronic	KNOWN	TRIM36-IT1	1	1	-0.474708
chr5	115188563	115188932	115188747	ENSG00000249791.1	+	antisense	KNOWN	CTC-428G20.2	1	1	-0.042101
chr5	115204012	115262872	115233442	ENSG00000164219.9	-	protein_coding	KNOWN	PGGT1B	5	9	-0.367212
chr5	115262505	115263448	115262976	ENSG00000271797.1	+	antisense	KNOWN	CTC-428G20.6	1	1	-0.205274
chr5	115264669	115265464	115265066	ENSG00000243304.3	-	processed_pseudogene	KNOWN	CTC-428G20.1	1	1	-0.205274
chr5	115267188	115296831	115282009	ENSG00000164221.12	-	protein_coding	KNOWN	CCDC112	7	11	-0.161525
chr5	115289036	115289330	115289183	ENSG00000250197.1	-	processed_pseudogene	KNOWN	HMGN1P15	1	1	-0.216130
chr5	115389643	115392370	115391006	ENSG00000249026.2	-	processed_pseudogene	KNOWN	CTNNAP1	1	1	0.037491
chr5	115402380	115402962	115402671	ENSG00000248722.1	+	processed_pseudogene	KNOWN	AK3P4	1	1	0.014824
chr5	115489634	115489931	115489782	ENSG00000249944.1	+	processed_pseudogene	KNOWN	CTB-161J7.1	1	1	0.161116
chr5	115493557	115493821	115493689	ENSG00000249433.1	+	processed_pseudogene	KNOWN	CTB-161J7.2	1	1	-0.167875
chr5	115512077	115513694	115512885	ENSG00000250444.1	+	processed_pseudogene	KNOWN	CCT5P1	1	1	-0.384107
chr5	115520908	115544894	115532901	ENSG00000145780.7	-	protein_coding	KNOWN	FEM1C	1	3	-0.512754
chr5	115578642	115626161	115602401	ENSG00000251201.8	-	protein_coding	KNOWN	TMED7-TICAM2	3	4	-0.386950
chr5	115578650	115602479	115590564	ENSG00000243414.5	-	protein_coding	KNOWN	TICAM2	2	2	-0.144116
chr5	115602057	115620659	115611358	ENSG00000249249.1	+	antisense	KNOWN	AC010226.4	3	3	-0.595322
chr5	115613508	115632992	115623250	ENSG00000134970.13	-	protein_coding	KNOWN	TMED7	3	3	-0.649817
chr5	115691462	115692167	115691814	ENSG00000249021.1	-	lincRNA	KNOWN	CTC-505O3.3	1	1	-0.176711
chr5	115755644	115756286	115755965	ENSG00000248709.1	+	lincRNA	KNOWN	CTC-505O3.2	1	1	-0.466975
chr5	115770586	115770989	115770787	ENSG00000251118.1	+	processed_pseudogene	KNOWN	CTC-505O3.1	1	1	-0.356871
chr5	115774319	115774502	115774410	ENSG00000222598.1	-	snRNA	KNOWN	RNU2-49P	1	1	-0.356871
chr5	115804733	115816954	115810843	ENSG00000129596.4	-	protein_coding	KNOWN	CDO1	4	6	-0.284678
chr5	115828200	115841858	115835029	ENSG00000145782.12	-	protein_coding	KNOWN	ATG12	13	6	-0.049725
chr5	115841481	115914081	115877781	ENSG00000177879.14	+	protein_coding	KNOWN	AP3S1	8	8	-0.230156
chr5	115855994	115858468	115857231	ENSG00000280329.1	+	protein_coding	KNOWN	AC026449.1	1	3	0.015540
chr5	115962454	116027619	115995036	ENSG00000172901.19	+	protein_coding	KNOWN	LVRN	10	21	-0.196806
chr5	115974513	115976275	115975394	ENSG00000248295.2	-	processed_pseudogene	KNOWN	DDX43P1	1	1	-0.233679
chr5	116022391	116058928	116040659	ENSG00000268714.3	+	protein_coding	KNOWN	CTD-2287O16.3	1	3	-0.359499
chr5	116030018	116030111	116030064	ENSG00000221778.2	+	miRNA	NOVEL	AC034236.2	1	1	-0.336542
chr5	116032324	116060118	116046221	ENSG00000268223.3	+	protein_coding	KNOWN	ARL14EPL	2	5	-0.378942
chr5	116043171	116043261	116043216	ENSG00000220996.1	-	miRNA	NOVEL	AC034236.1	1	1	-0.336542
chr5	116051917	116052289	116052103	ENSG00000185641.6	-	processed_pseudogene	KNOWN	CTD-2287O16.1	1	1	-0.453004
chr5	116078110	116078570	116078340	ENSG00000272265.1	-	lincRNA	KNOWN	CTD-2287O16.4	1	1	-0.101888
chr5	116083807	116085416	116084611	ENSG00000271918.1	-	antisense	KNOWN	CTD-2287O16.5	1	1	-0.101888
chr5	116084991	116412762	116248876	ENSG00000145781.8	+	protein_coding	KNOWN	COMMD10	7	7	-0.408049
chr5	116188455	116188552	116188503	ENSG00000212457.1	-	snRNA	KNOWN	RNU6-644P	1	1	-0.309371
chr5	116218026	116218295	116218160	ENSG00000232916.1	-	processed_pseudogene	KNOWN	HMGN2P27	1	1	-0.395274
chr5	116302354	116304134	116303244	ENSG00000250015.1	-	lincRNA	KNOWN	CTC-339F2.2	1	2	-0.547418
chr5	116443616	116574934	116509275	ENSG00000092421.16	-	protein_coding	KNOWN	SEMA6A	15	20	-0.349078
chr5	116447547	116508276	116477911	ENSG00000248445.5	+	antisense	KNOWN	SEMA6A-AS1	6	3	-0.360128
chr5	116562562	116562930	116562746	ENSG00000239528.1	+	processed_pseudogene	KNOWN	RPS14P8	1	1	-0.255174
chr5	116574482	116591398	116582940	ENSG00000249167.1	+	lincRNA	KNOWN	CTB-118N6.2	1	2	-0.226475
chr5	116716243	116716650	116716446	ENSG00000197575.6	+	processed_pseudogene	KNOWN	RPS17P2	1	1	-0.962456
chr5	116742991	116762209	116752600	ENSG00000251311.1	-	lincRNA	KNOWN	RP11-249M12.2	1	4	-0.286925
chr5	116820993	116830187	116825590	ENSG00000249150.1	-	lincRNA	KNOWN	CTC-472C24.1	1	3	-0.266370
chr5	117019548	117019679	117019613	ENSG00000250650.1	-	processed_pseudogene	KNOWN	RP11-492L8.1	1	1	-0.177615
chr5	117031200	117038569	117034884	ENSG00000250949.1	+	lincRNA	KNOWN	RP11-492L8.2	1	2	-0.447819
chr5	117301104	117301442	117301273	ENSG00000243758.1	-	processed_pseudogene	KNOWN	RPL35AP15	1	1	-0.644974
chr5	117415509	117546298	117480903	ENSG00000248663.6	+	lincRNA	KNOWN	LINC00992	2	4	-0.622071
chr5	117719240	117722097	117720668	ENSG00000251477.1	-	processed_pseudogene	KNOWN	RP11-74D3.2	1	2	-0.760451
chr5	117778826	117779532	117779179	ENSG00000249582.1	-	processed_pseudogene	KNOWN	RPL7L1P4	1	1	-0.563563
chr5	117924987	117925122	117925054	ENSG00000281682.1	+	miRNA	NOVEL	AC114945.1	1	1	-0.568259
chr5	117925008	118266035	118095521	ENSG00000249797.1	+	lincRNA	KNOWN	CTD-3179P9.1	2	4	-0.578954
chr5	118282575	118284782	118283678	ENSG00000250427.1	+	lincRNA	KNOWN	HNCAT21	1	2	-0.568259
chr5	118468156	118562117	118515136	ENSG00000250891.1	-	lincRNA	KNOWN	CTD-2281M20.1	2	9	-0.381534
chr5	118575575	118581324	118578449	ENSG00000249551.1	+	lincRNA	KNOWN	RP11-2N5.2	1	5	0.044374
chr5	118596188	118628092	118612140	ENSG00000249128.1	+	lincRNA	KNOWN	RP11-2N5.1	1	5	-0.390547
chr5	118758211	118758274	118758242	ENSG00000238904.1	+	snRNA	KNOWN	RNU7-34P	1	1	-0.367440
chr5	118760474	118785459	118772966	ENSG00000249426.1	-	lincRNA	KNOWN	CTC-448D22.1	1	2	-0.179934
chr5	118837322	118988545	118912933	ENSG00000169570.9	-	protein_coding	KNOWN	DTWD2	4	6	-0.325506
chr5	118973796	118974122	118973959	ENSG00000197744.5	+	processed_pseudogene	KNOWN	PTMAP2	1	1	0.126140
chr5	119006347	119070890	119038618	ENSG00000249494.5	-	antisense	KNOWN	CTB-161M19.4	3	6	-0.212172
chr5	119010060	119010542	119010301	ENSG00000250678.1	+	processed_pseudogene	KNOWN	CTB-161M19.1	1	1	-0.246810
chr5	119011471	119012056	119011763	ENSG00000250928.1	+	processed_pseudogene	KNOWN	CTB-161M19.2	1	1	-0.246810
chr5	119037772	119249138	119143455	ENSG00000172869.14	+	protein_coding	KNOWN	DMXL1	15	44	-0.182964
chr5	119126782	119128444	119127613	ENSG00000248885.1	-	processed_pseudogene	KNOWN	RP11-950K24.2	1	2	-0.161127
chr5	119132651	119132882	119132766	ENSG00000248979.2	-	processed_pseudogene	KNOWN	LAMTOR3P2	1	1	-0.317884
chr5	119138859	119138965	119138912	ENSG00000206786.1	+	snRNA	KNOWN	RNU6-701P	1	1	-0.317884
chr5	119154637	119154716	119154676	ENSG00000264536.1	+	miRNA	KNOWN	MIR5706	1	1	-0.139738
chr5	119163298	119163388	119163343	ENSG00000275541.1	-	miRNA	NOVEL	AC118465.1	1	1	-0.139738
chr5	119257340	119257437	119257388	ENSG00000266587.1	-	miRNA	NOVEL	AC027320.1	1	1	-0.123468
chr5	119268692	119399688	119334190	ENSG00000145779.7	+	protein_coding	KNOWN	TNFAIP8	7	3	0.007586
chr5	119306343	119306631	119306487	ENSG00000243333.3	-	misc_RNA	KNOWN	RN7SL174P	1	1	-0.139955
chr5	119408205	119408305	119408255	ENSG00000281463.1	-	miRNA	NOVEL	AC035144.1	1	1	0.117527
chr5	119445716	119445833	119445774	ENSG00000202092.1	+	rRNA	KNOWN	RNA5SP190	1	1	0.041951
chr5	119452443	119637199	119544821	ENSG00000133835.14	+	protein_coding	KNOWN	HSD17B4	27	25	-0.370953
chr5	119547131	119547606	119547368	ENSG00000213663.4	-	processed_pseudogene	KNOWN	CTD-2158P22.1	1	1	-0.551315
chr5	119555250	119555658	119555454	ENSG00000249919.1	-	processed_pseudogene	KNOWN	FABP5P6	1	1	-0.516817
chr5	119629559	119635822	119632690	ENSG00000164334.15	+	protein_coding	KNOWN	FAM170A	7	5	-0.448504
chr5	119652523	119653000	119652761	ENSG00000250895.1	-	processed_pseudogene	KNOWN	CTD-2158P22.4	1	1	-0.556165
chr5	119680197	119681080	119680638	ENSG00000234259.3	+	processed_pseudogene	KNOWN	CTC-507E12.1	1	1	-0.586080
chr5	120245448	120333502	120289475	ENSG00000251293.1	-	lincRNA	KNOWN	CTC-552D5.1	1	2	-0.506866
chr5	120337549	120337653	120337601	ENSG00000251975.1	-	snRNA	KNOWN	RNU6-718P	1	1	-0.209010
chr5	120345907	120404837	120375372	ENSG00000261036.1	-	lincRNA	KNOWN	RP11-574H6.1	1	2	-0.435289
chr5	120464278	120687332	120575805	ENSG00000184838.14	+	protein_coding	KNOWN	PRR16	5	4	-0.286611
chr5	120658077	120658371	120658224	ENSG00000270741.1	-	processed_pseudogene	KNOWN	PRELID3BP8	1	1	-0.497297
chr5	120710698	120710840	120710769	ENSG00000222609.1	-	snRNA	KNOWN	RNU4-69P	1	1	-0.413536
chr5	120781218	120790778	120785998	ENSG00000248927.1	+	lincRNA	KNOWN	CTD-2334D19.1	1	2	-0.437328
chr5	121040090	121044032	121042061	ENSG00000251135.2	+	processed_pseudogene	KNOWN	AC008565.1	1	3	-0.644974
chr5	121059244	121060953	121060098	ENSG00000248853.1	+	processed_pseudogene	KNOWN	CTD-2613O8.1	1	2	-0.401048
chr5	121195980	121196210	121196095	ENSG00000250847.1	-	unprocessed_pseudogene	KNOWN	CTD-2020P22.1	1	1	-0.662896
chr5	121199704	121357398	121278551	ENSG00000229855.8	+	lincRNA	KNOWN	CTC-546K23.1	7	6	-0.603535
chr5	121363002	121365314	121364158	ENSG00000279860.1	+	TEC	KNOWN	CTC-546K23.2	1	1	-0.745951
chr5	121575848	121576320	121576084	ENSG00000244088.1	-	processed_pseudogene	KNOWN	RPL23AP44	1	1	-0.891706
chr5	121616247	121616807	121616527	ENSG00000213661.3	+	processed_pseudogene	KNOWN	RP11-510I6.2	1	1	-0.826394
chr5	121671373	121671872	121671622	ENSG00000249600.1	-	processed_pseudogene	KNOWN	RP11-510I6.3	1	1	-0.518062
chr5	121851955	121852833	121852394	ENSG00000181867.2	+	protein_coding	KNOWN	FTMT	1	1	-0.827390
chr5	121961961	122075570	122018765	ENSG00000151304.5	+	protein_coding	KNOWN	SRFBP1	2	8	-0.318944
chr5	122063195	122078285	122070740	ENSG00000113083.12	-	protein_coding	KNOWN	LOX	5	7	0.042069
chr5	122128762	122154856	122141809	ENSG00000247311.2	-	antisense	KNOWN	CTC-441N14.2	1	2	-0.181865
chr5	122129513	122179617	122154565	ENSG00000164185.4	+	protein_coding	KNOWN	ZNF474	4	5	-0.046853
chr5	122154496	122156015	122155255	ENSG00000249610.1	-	antisense	KNOWN	CTC-441N14.1	1	2	0.280437
chr5	122157368	122182658	122170013	ENSG00000250803.5	+	transcribed_processed_pseudogene	KNOWN	CTC-441N14.4	4	5	0.037680
chr5	122311297	122311673	122311485	ENSG00000272139.1	-	antisense	KNOWN	CTD-2544H17.2	1	1	-0.269465
chr5	122311354	122464219	122387786	ENSG00000064692.18	+	protein_coding	KNOWN	SNCAIP	22	14	-0.321506
chr5	122321291	122323358	122322324	ENSG00000249621.1	-	lincRNA	KNOWN	CTD-2544H17.1	1	2	-0.269465
chr5	122369762	122383568	122376665	ENSG00000249916.1	-	antisense	KNOWN	CTD-2280E9.1	1	4	-0.328517
chr5	122436497	122479087	122457792	ENSG00000250328.5	-	antisense	KNOWN	MGC32805	5	6	-0.328042
chr5	122478662	122478729	122478695	ENSG00000277169.1	+	miRNA	NOVEL	AC022101.1	1	1	-0.323046
chr5	122628952	122730685	122679818	ENSG00000251538.5	-	lincRNA	KNOWN	RP11-166A12.1	3	12	-0.466403
chr5	122675795	122676755	122676275	ENSG00000240058.3	+	processed_pseudogene	KNOWN	ARGFXP1	1	1	-0.289098
chr5	122774996	122830108	122802552	ENSG00000205302.6	+	protein_coding	KNOWN	SNX2	13	15	-0.382588
chr5	122776431	122776527	122776479	ENSG00000212114.1	-	miRNA	NOVEL	AC093267.1	1	1	-0.233883
chr5	122832356	122834533	122833444	ENSG00000260686.1	+	sense_overlapping	KNOWN	CTB-36H16.2	1	1	-0.386662
chr5	122843439	123029354	122936396	ENSG00000064652.10	+	protein_coding	KNOWN	SNX24	12	8	-0.052049
chr5	123022487	123022783	123022635	ENSG00000263432.2	-	misc_RNA	KNOWN	RN7SL689P	1	1	-0.323046
chr5	123023250	123036741	123029995	ENSG00000168938.5	-	protein_coding	KNOWN	PPIC	2	5	0.048671
chr5	123036271	123054667	123045469	ENSG00000249996.1	+	antisense	KNOWN	RP11-359P5.1	1	2	0.260644
chr5	123070782	123071080	123070931	ENSG00000276047.1	+	misc_RNA	KNOWN	RN7SL711P	1	1	-0.353419
chr5	123087248	123090299	123088773	ENSG00000223652.2	-	antisense	KNOWN	AC106786.1	2	2	-0.288712
chr5	123089121	123194266	123141693	ENSG00000061455.10	+	protein_coding	KNOWN	PRDM6	4	8	0.006465
chr5	123236079	123236370	123236224	ENSG00000213655.4	+	processed_pseudogene	KNOWN	CTD-2347I17.1	1	1	-0.203833
chr5	123344885	123423592	123384238	ENSG00000168944.15	-	protein_coding	KNOWN	CEP120	9	23	-0.226887
chr5	123400922	123402344	123401633	ENSG00000250539.1	-	processed_pseudogene	KNOWN	KRT8P33	1	1	-0.110637
chr5	123468781	123469429	123469105	ENSG00000249400.1	-	processed_pseudogene	KNOWN	HMGB3P17	1	1	-0.349135
chr5	123508736	123509187	123508961	ENSG00000279772.1	-	TEC	KNOWN	CTD-2169H9.1	1	1	0.195421
chr5	123512099	123617045	123564572	ENSG00000151292.17	+	protein_coding	KNOWN	CSNK1G3	10	13	-0.385003
chr5	123636110	123637403	123636756	ENSG00000235275.3	+	processed_pseudogene	KNOWN	KRT18P16	1	1	-0.607499
chr5	124059794	124405079	124232436	ENSG00000253807.5	-	lincRNA	KNOWN	LINC01170	2	5	-0.419550
chr5	124220579	124221077	124220828	ENSG00000250862.1	-	processed_pseudogene	KNOWN	HMGB1P29	1	1	-0.142473
chr5	124395603	124400655	124398129	ENSG00000251421.2	+	lincRNA	KNOWN	CTC-369A16.2	1	2	-0.456751
chr5	124455373	124460098	124457735	ENSG00000248600.1	+	lincRNA	KNOWN	CTD-2308B18.4	1	3	-0.331038
chr5	124459912	124460549	124460230	ENSG00000251214.1	-	lincRNA	KNOWN	CTD-2308B18.1	1	1	-0.331038
chr5	124469591	124469901	124469746	ENSG00000250438.1	+	lincRNA	KNOWN	CTD-2308B18.2	1	1	-0.331038
chr5	124492775	124536348	124514561	ENSG00000248296.1	-	lincRNA	KNOWN	CTD-2308B18.3	1	3	-0.416475
chr5	124636913	124748807	124692860	ENSG00000168916.15	-	protein_coding	KNOWN	ZNF608	10	9	-0.058374
chr5	124707827	124710737	124709282	ENSG00000249112.1	+	antisense	KNOWN	RP11-43D2.2	1	3	-0.245341
chr5	124734618	124735175	124734896	ENSG00000251456.1	-	sense_intronic	KNOWN	RP11-436H11.5	1	1	-0.024201
chr5	124808828	124809233	124809030	ENSG00000242814.2	-	processed_pseudogene	KNOWN	RP11-436H11.1	1	1	-0.285710
chr5	124829472	124830290	124829881	ENSG00000248443.1	+	lincRNA	KNOWN	RP11-284A20.3	1	1	-0.303289
chr5	124868972	124869914	124869443	ENSG00000249261.1	-	lincRNA	KNOWN	RP11-284A20.2	1	1	-0.343656
chr5	124919947	124921598	124920772	ENSG00000249423.1	+	lincRNA	KNOWN	RP11-284A20.1	1	2	-0.192152
chr5	125036831	125042239	125039535	ENSG00000250411.1	+	lincRNA	KNOWN	RP11-257I8.2	1	2	-0.320655
chr5	125074665	125074980	125074822	ENSG00000250194.1	+	processed_pseudogene	KNOWN	RP11-257I8.1	1	1	-0.096453
chr5	125108204	125149929	125129066	ENSG00000249365.1	+	lincRNA	KNOWN	RP11-508M8.1	1	2	-0.426403
chr5	125265528	125265651	125265589	ENSG00000250721.1	+	processed_pseudogene	KNOWN	HMGB1P22	1	1	-0.427118
chr5	125295409	125295493	125295451	ENSG00000274872.1	+	miRNA	NOVEL	AC109471.1	1	1	-0.406997
chr5	125325350	125367734	125346542	ENSG00000281608.1	+	lincRNA	KNOWN	RP11-395P13.7	1	2	-0.160818
chr5	125350868	125351131	125350999	ENSG00000222107.1	-	misc_RNA	KNOWN	RN7SKP117	1	1	-0.131904
chr5	125376828	125377439	125377133	ENSG00000250402.2	-	lincRNA	KNOWN	RP11-395P13.4	1	1	-0.480998
chr5	125493261	125602227	125547744	ENSG00000260192.1	+	lincRNA	KNOWN	RP11-756H20.1	1	4	-0.530286
chr5	125862746	125863193	125862969	ENSG00000249950.1	-	processed_pseudogene	KNOWN	CTC-394G3.1	1	1	-0.319986
chr5	125886285	125886753	125886519	ENSG00000249904.1	-	processed_pseudogene	KNOWN	CTC-394G3.2	1	1	-0.624215
chr5	125966777	125968085	125967431	ENSG00000241888.2	-	processed_pseudogene	KNOWN	RPSAP37	1	2	-0.917723
chr5	126076800	126279801	126178300	ENSG00000248752.1	-	lincRNA	KNOWN	RP11-114J13.1	1	3	-0.457540
chr5	126179577	126193850	126186713	ENSG00000248107.1	+	lincRNA	KNOWN	CTC-339D2.1	1	4	-0.576375
chr5	126196835	126196915	126196875	ENSG00000265637.1	+	miRNA	NOVEL	AC010235.1	1	1	-0.608448
chr5	126360132	126496494	126428313	ENSG00000155324.9	+	protein_coding	KNOWN	GRAMD3	19	15	0.072345
chr5	126433505	126490371	126461938	ENSG00000250602.5	-	antisense	KNOWN	RP11-517I3.1	3	3	0.202902
chr5	126496279	126498604	126497441	ENSG00000279118.1	+	TEC	KNOWN	RP11-517I3.2	1	1	-0.033539
chr5	126541841	126595418	126568629	ENSG00000164904.15	-	protein_coding	KNOWN	ALDH7A1	16	18	0.090529
chr5	126600268	126627252	126613760	ENSG00000164902.13	+	protein_coding	KNOWN	PHAX	5	5	0.039654
chr5	126628019	126628319	126628169	ENSG00000230929.5	-	processed_pseudogene	KNOWN	RP11-395C3.1	1	1	-0.000037
chr5	126631722	126636287	126634004	ENSG00000196900.4	+	protein_coding	KNOWN	TEX43	2	3	0.141745
chr5	126663337	126663568	126663452	ENSG00000213630.3	-	processed_pseudogene	KNOWN	BOLA3P3	1	1	0.198907
chr5	126737438	126737995	126737716	ENSG00000249768.2	-	processed_pseudogene	KNOWN	HSPE1P10	1	1	-0.026403
chr5	126751963	126776486	126764224	ENSG00000251072.2	-	lincRNA	KNOWN	RP11-434D11.4	1	4	-0.140007
chr5	126755316	126755417	126755366	ENSG00000252185.1	-	snRNA	KNOWN	RNU6-752P	1	1	-0.239717
chr5	126776623	126837020	126806821	ENSG00000113368.11	+	protein_coding	KNOWN	LMNB1	8	12	0.042877
chr5	126867714	127030808	126949261	ENSG00000173926.5	-	protein_coding	KNOWN	MARCH3	5	5	-0.092175
chr5	127042558	127073492	127058025	ENSG00000164241.13	-	protein_coding	KNOWN	C5orf63	8	6	-0.261799
chr5	127073587	127075604	127074595	ENSG00000279446.1	+	TEC	KNOWN	AC005915.1	1	1	-0.396627
chr5	127143082	127143247	127143164	ENSG00000214743.4	-	processed_pseudogene	KNOWN	MRPS5P3	1	1	-0.063659
chr5	127170535	127172266	127171400	ENSG00000250080.1	-	processed_pseudogene	KNOWN	CTB-88F18.2	1	1	-0.200363
chr5	127176696	127177050	127176873	ENSG00000271585.1	-	processed_pseudogene	KNOWN	CTB-88F18.4	1	1	-0.200363
chr5	127179756	127179900	127179828	ENSG00000250956.1	-	processed_pseudogene	KNOWN	CTB-88F18.3	1	1	-0.200363
chr5	127290831	127465737	127378284	ENSG00000145794.16	+	protein_coding	KNOWN	MEGF10	10	26	-0.388542
chr5	127465822	127466118	127465970	ENSG00000249577.1	+	processed_pseudogene	KNOWN	CTD-2195M15.1	1	1	-0.292868
chr5	127478295	127478737	127478516	ENSG00000271766.1	+	lincRNA	KNOWN	CTD-2195M15.3	1	1	-0.804386
chr5	127511464	127512842	127512153	ENSG00000250859.1	-	processed_pseudogene	KNOWN	HNRNPKP1	1	1	-0.138621
chr5	127517609	127555089	127536349	ENSG00000164244.20	+	protein_coding	KNOWN	PRRC1	6	10	-0.332112
chr5	127588746	127590710	127589728	ENSG00000282925.1	-	lincRNA	KNOWN	CTD-2195M15.4	1	2	-0.138382
chr5	127649044	127658630	127653837	ENSG00000205279.8	+	protein_coding	KNOWN	CTXN3	4	3	-0.450051
chr5	127651693	127664029	127657861	ENSG00000248799.1	-	antisense	KNOWN	CTC-548H10.2	1	4	-0.457347
chr5	127703390	127941634	127822512	ENSG00000230561.3	+	lincRNA	KNOWN	LINC01183	3	7	-0.168328
chr5	127784618	127787042	127785830	ENSG00000251032.1	-	processed_pseudogene	KNOWN	CUL1P1	1	1	-0.156921
chr5	127838486	127857804	127848145	ENSG00000250603.1	-	lincRNA	KNOWN	CTC-228N24.2	1	2	-0.107169
chr5	127940426	128083172	128011799	ENSG00000245937.7	-	lincRNA	KNOWN	LINC01184	11	5	-0.171402
chr5	128083766	128189688	128136727	ENSG00000064651.13	+	protein_coding	KNOWN	SLC12A2	8	27	-0.288059
chr5	128109486	128110994	128110240	ENSG00000250329.1	+	processed_pseudogene	KNOWN	KDELC1P1	1	1	-0.135531
chr5	128257909	128659185	128458547	ENSG00000138829.10	-	protein_coding	KNOWN	FBN2	9	71	-0.278501
chr5	128371099	128371212	128371155	ENSG00000207290.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.665647
chr5	128538013	129033642	128785827	ENSG00000113396.12	+	protein_coding	KNOWN	SLC27A6	4	11	-0.387602
chr5	128663978	128742829	128703403	ENSG00000248634.1	+	sense_intronic	KNOWN	CTC-573M9.1	1	2	-0.281073
chr5	129094751	129114028	129104389	ENSG00000066583.11	+	protein_coding	KNOWN	ISOC1	2	5	-0.327749
chr5	129097688	129097766	129097727	ENSG00000264563.1	+	miRNA	KNOWN	MIR4633	1	1	-0.287422
chr5	129397062	129397147	129397104	ENSG00000265691.1	-	miRNA	KNOWN	MIR4460	1	1	-0.308188
chr5	129459559	129460689	129460124	ENSG00000249421.1	-	antisense	KNOWN	ADAMTS19-AS1	1	2	-0.676061
chr5	129460265	129738683	129599474	ENSG00000145808.8	+	protein_coding	KNOWN	ADAMTS19	4	23	-0.686390
chr5	129500361	129905917	129703139	ENSG00000251680.5	-	antisense	KNOWN	CTC-575N7.1	2	5	-0.579091
chr5	129748079	129766732	129757405	ENSG00000186367.6	+	protein_coding	KNOWN	KIAA1024L	1	3	-0.445797
chr5	129904472	130186634	130045553	ENSG00000198108.3	+	protein_coding	KNOWN	CHSY3	2	3	-0.496344
chr5	129974891	129975001	129974946	ENSG00000221562.1	+	snRNA	KNOWN	RNU6ATAC10P	1	1	-0.751039
chr5	130114409	130114510	130114459	ENSG00000199455.1	+	rRNA	KNOWN	RNA5SP191	1	1	-0.536914
chr5	130140031	130141950	130140990	ENSG00000248610.1	+	processed_pseudogene	KNOWN	HSPA8P4	1	1	-0.539040
chr5	130277625	130277693	130277659	ENSG00000263954.1	-	miRNA	NOVEL	AC004769.1	1	1	-0.432167
chr5	130386621	130386680	130386650	ENSG00000252514.1	-	snRNA	KNOWN	RNU7-53P	1	1	-0.285646
chr5	130529419	130529889	130529654	ENSG00000249312.1	+	processed_pseudogene	KNOWN	ARL2BPP4	1	1	-0.517549
chr5	130598348	130598779	130598563	ENSG00000249418.2	+	processed_pseudogene	KNOWN	AC005741.2	1	1	-0.868262
chr5	130989897	130990428	130990162	ENSG00000244192.1	+	processed_pseudogene	KNOWN	RP11-114H7.1	1	1	-0.229069
chr5	130994253	130996164	130995208	ENSG00000250405.2	+	processed_pseudogene	KNOWN	RP11-114H7.2	1	1	-0.117931
chr5	131008583	131008742	131008662	ENSG00000248955.1	+	processed_pseudogene	KNOWN	RP11-114H7.3	1	1	-0.117931
chr5	131159027	131171735	131165381	ENSG00000169567.11	-	protein_coding	KNOWN	HINT1	10	5	-0.191924
chr5	131170810	131205426	131188118	ENSG00000186687.15	+	protein_coding	KNOWN	LYRM7	4	5	0.067753
chr5	131245493	131398447	131321970	ENSG00000158985.13	+	protein_coding	KNOWN	CDC42SE2	12	6	-0.003153
chr5	131261321	131261607	131261464	ENSG00000279370.1	-	TEC	KNOWN	RP1-247F3.1	1	1	-0.002645
chr5	131423921	131635236	131529578	ENSG00000158987.20	-	protein_coding	KNOWN	RAPGEF6	15	29	-0.172851
chr5	131425891	131796983	131611437	ENSG00000273217.1	-	protein_coding	KNOWN	CTC-432M15.3	1	29	-0.199853
chr5	131440031	131440196	131440113	ENSG00000275939.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.403139
chr5	131641714	131797063	131719388	ENSG00000217128.11	-	protein_coding	KNOWN	FNIP1	6	19	-0.249038
chr5	131797415	131797929	131797672	ENSG00000279584.1	+	TEC	KNOWN	AC005593.2	1	1	0.035776
chr5	131806993	131945698	131876345	ENSG00000239642.5	-	protein_coding	KNOWN	MEIKIN	5	13	-0.392049
chr5	131807143	131994278	131900710	ENSG00000281938.1	-	protein_coding	KNOWN	CTB-127M13.1	1	31	-0.328518
chr5	131944408	131968220	131956314	ENSG00000234758.1	+	antisense	KNOWN	AC034228.4	1	3	-0.455461
chr5	131949973	132012243	131981108	ENSG00000164398.12	-	protein_coding	KNOWN	ACSL6	21	21	-0.073298
chr5	132003592	132007022	132005307	ENSG00000223548.1	+	antisense	KNOWN	AC034228.3	1	2	0.091992
chr5	132011448	132013199	132012323	ENSG00000231585.1	+	antisense	KNOWN	AC034228.2	1	3	0.077778
chr5	132060529	132063204	132061866	ENSG00000164399.4	+	protein_coding	KNOWN	IL3	1	5	0.220148
chr5	132073790	132076170	132074980	ENSG00000164400.5	+	protein_coding	KNOWN	CSF2	1	4	0.376295
chr5	132080066	132080133	132080099	ENSG00000253067.1	+	snoRNA	NOVEL	snoZ6	1	1	0.376295
chr5	132147491	132149559	132148525	ENSG00000227616.1	-	unprocessed_pseudogene	KNOWN	AC063976.1	1	2	-0.178778
chr5	132163603	132163765	132163684	ENSG00000235775.1	-	unprocessed_pseudogene	KNOWN	AC063976.2	1	1	-0.477623
chr5	132179234	132181128	132180181	ENSG00000224015.1	-	lincRNA	KNOWN	AC063976.3	1	2	-0.372971
chr5	132184876	132192808	132188842	ENSG00000237714.1	+	antisense	KNOWN	P4HA2-AS1	1	3	-0.178488
chr5	132191838	132295315	132243576	ENSG00000072682.18	-	protein_coding	KNOWN	P4HA2	21	16	0.387653
chr5	132199456	132203487	132201471	ENSG00000224431.1	+	processed_pseudogene	KNOWN	AC063976.7	1	2	0.176205
chr5	132257671	132273454	132265562	ENSG00000131435.12	+	protein_coding	KNOWN	PDLIM4	7	7	0.238049
chr5	132294443	132344206	132319324	ENSG00000197208.5	+	protein_coding	KNOWN	SLC22A4	3	10	0.201234
chr5	132311285	132369916	132340600	ENSG00000233006.6	-	processed_transcript	KNOWN	AC034220.3	4	8	0.147990
chr5	132365490	132365599	132365544	ENSG00000263597.1	-	miRNA	KNOWN	MIR3936	1	1	0.069031
chr5	132369752	132395614	132382683	ENSG00000197375.12	+	protein_coding	KNOWN	SLC22A5	9	11	0.391022
chr5	132410636	132476044	132443340	ENSG00000197536.10	+	protein_coding	KNOWN	C5orf56	7	4	0.513517
chr5	132419416	132426714	132423065	ENSG00000238160.1	-	antisense	KNOWN	AC116366.5	2	2	0.383881
chr5	132468147	132468257	132468202	ENSG00000202533.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.685466
chr5	132468890	132473043	132470966	ENSG00000234290.2	-	antisense	KNOWN	AC116366.6	1	2	0.417050
chr5	132481609	132490798	132486203	ENSG00000125347.13	-	protein_coding	KNOWN	IRF1	11	10	0.356516
chr5	132488382	132488702	132488542	ENSG00000277192.1	+	antisense	KNOWN	RP11-89G4.1	1	1	0.319260
chr5	132541444	132556838	132549141	ENSG00000113525.9	-	protein_coding	KNOWN	IL5	3	4	0.157901
chr5	132556019	132646344	132601181	ENSG00000113522.13	+	protein_coding	KNOWN	RAD50	9	25	-0.150368
chr5	132630589	132664272	132647430	ENSG00000223442.1	-	antisense	KNOWN	TH2LCRR	4	4	0.015949
chr5	132656263	132661110	132658686	ENSG00000169194.9	+	protein_coding	KNOWN	IL13	6	6	0.037544
chr5	132673986	132682676	132678331	ENSG00000113520.10	+	protein_coding	KNOWN	IL4	4	5	0.772302
chr5	132688681	132723725	132706203	ENSG00000230612.3	+	antisense	KNOWN	AC004237.1	4	3	0.104177
chr5	132692628	132737638	132715133	ENSG00000131437.15	-	protein_coding	KNOWN	KIF3A	8	19	0.062538
chr5	132747445	132754403	132750924	ENSG00000205089.7	+	protein_coding	KNOWN	CCNI2	4	6	0.369966
chr5	132750817	132807241	132779029	ENSG00000164402.13	-	protein_coding	KNOWN	SEPT8	16	11	0.594352
chr5	132813587	132816797	132815192	ENSG00000198944.5	+	protein_coding	KNOWN	SOWAHA	1	1	0.311957
chr5	132817248	132818000	132817624	ENSG00000272203.1	-	lincRNA	KNOWN	AC004775.5	1	1	0.311957
chr5	132822141	132830898	132826519	ENSG00000164403.14	-	protein_coding	KNOWN	SHROOM1	8	10	0.329387
chr5	132848577	132848696	132848636	ENSG00000201274.1	+	rRNA	KNOWN	RNA5SP192	1	1	0.481735
chr5	132861181	132866884	132864032	ENSG00000164404.8	-	protein_coding	KNOWN	GDF9	7	4	0.174454
chr5	132866560	132868031	132867295	ENSG00000164405.10	+	protein_coding	KNOWN	UQCRQ	6	3	0.174454
chr5	132872322	132875046	132873684	ENSG00000164406.7	+	protein_coding	KNOWN	LEAP2	3	3	0.264571
chr5	132875379	132963634	132919506	ENSG00000072364.12	-	protein_coding	KNOWN	AFF4	9	21	0.202103
chr5	132942932	132945050	132943991	ENSG00000235253.1	+	processed_pseudogene	KNOWN	AC010240.2	1	2	0.057844
chr5	132945342	132945454	132945398	ENSG00000202417.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.057844
chr5	132948493	132948718	132948605	ENSG00000225364.1	+	processed_pseudogene	KNOWN	ATP6V0E1P1	1	1	0.057844
chr5	132963770	132964164	132963967	ENSG00000272023.1	+	lincRNA	KNOWN	CTC-350I8.1	1	1	0.328226
chr5	132987652	132988110	132987881	ENSG00000229738.1	-	processed_pseudogene	KNOWN	AC010240.3	1	1	0.291556
chr5	132993099	132993200	132993149	ENSG00000199677.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.099854
chr5	132996985	133026604	133011794	ENSG00000155329.11	-	protein_coding	KNOWN	ZCCHC10	10	5	0.263022
chr5	133003119	133003365	133003242	ENSG00000248648.1	+	processed_pseudogene	KNOWN	RP11-485M7.1	1	1	0.099854
chr5	133051962	133106449	133079205	ENSG00000170606.13	+	protein_coding	KNOWN	HSPA4	6	21	0.273348
chr5	133052769	133052971	133052870	ENSG00000279691.1	+	TEC	KNOWN	RP11-485M7.2	1	1	0.719438
chr5	133111055	133114475	133112765	ENSG00000251616.1	-	lincRNA	KNOWN	RP11-485M7.3	1	2	0.280601
chr5	133160438	133224413	133192425	ENSG00000248245.1	+	antisense	KNOWN	CTB-49A3.2	2	4	-0.149148
chr5	133172218	133173053	133172635	ENSG00000240611.1	-	processed_pseudogene	KNOWN	CTB-49A3.1	1	1	-0.520083
chr5	133196455	133612564	133404509	ENSG00000053108.16	-	protein_coding	KNOWN	FSTL4	7	16	-0.069203
chr5	133243764	133248781	133246272	ENSG00000249478.1	+	antisense	KNOWN	CTB-49A3.5	2	2	-0.063286
chr5	133256492	133275977	133266234	ENSG00000250244.5	+	antisense	KNOWN	CTB-49A3.4	2	3	0.105940
chr5	133387773	133388549	133388161	ENSG00000250409.1	+	antisense	KNOWN	CTB-3M24.3	1	2	0.091992
chr5	133427596	133427706	133427651	ENSG00000221287.1	-	miRNA	KNOWN	MIR1289-2	1	1	-0.454497
chr5	133457805	133458331	133458068	ENSG00000280104.1	+	TEC	KNOWN	CTB-3M24.2	1	1	0.033986
chr5	133469005	133469067	133469036	ENSG00000273939.1	-	miRNA	NOVEL	AC010608.1	1	1	0.033986
chr5	133574829	133575298	133575063	ENSG00000279197.1	-	TEC	KNOWN	CTB-3M24.1	1	1	-0.196634
chr5	133720495	133720934	133720714	ENSG00000251243.1	-	processed_pseudogene	KNOWN	AC005178.1	1	1	0.076050
chr5	133913677	133917269	133915473	ENSG00000249073.1	+	lincRNA	KNOWN	WSPAR	1	3	-0.131514
chr5	133955502	133968787	133962144	ENSG00000113583.7	-	protein_coding	KNOWN	C5orf15	3	3	-0.100653
chr5	133971915	134005133	133988524	ENSG00000213585.10	-	protein_coding	KNOWN	VDAC1	7	9	0.415925
chr5	134005147	134005562	134005354	ENSG00000271737.1	+	lincRNA	KNOWN	CTB-113I20.2	1	1	0.412212
chr5	134081914	134082040	134081977	ENSG00000271128.1	-	processed_pseudogene	KNOWN	CTB-113I20.1	1	1	0.321997
chr5	134114711	134151865	134133288	ENSG00000081059.19	+	protein_coding	KNOWN	TCF7	24	11	0.573160
chr5	134148935	134177038	134162986	ENSG00000113558.18	-	protein_coding	KNOWN	SKP1	13	7	0.400766
chr5	134167170	134226071	134196620	ENSG00000272772.1	-	protein_coding	KNOWN	CTD-2410N18.5	1	3	0.388611
chr5	134194334	134226142	134210238	ENSG00000113575.9	-	protein_coding	KNOWN	PPP2CA	6	7	0.361935
chr5	134205614	134371044	134288329	ENSG00000273345.5	-	processed_transcript	KNOWN	CTD-2410N18.4	2	10	0.212983
chr5	134225757	134225852	134225804	ENSG00000266751.1	+	miRNA	KNOWN	MIR3661	1	1	0.455539
chr5	134226410	134227827	134227118	ENSG00000270177.1	+	lincRNA	KNOWN	CTD-2410N18.3	1	1	0.455539
chr5	134267421	134267856	134267638	ENSG00000239615.1	+	processed_pseudogene	KNOWN	CTD-2410N18.1	1	1	0.282514
chr5	134286350	134371047	134328698	ENSG00000006837.11	-	protein_coding	KNOWN	CDKL3	10	13	0.158832
chr5	134371179	134391992	134381585	ENSG00000119048.7	+	protein_coding	KNOWN	UBE2B	8	7	0.167905
chr5	134394360	134395008	134394684	ENSG00000279469.1	-	TEC	KNOWN	RP11-215P8.2	1	1	0.395238
chr5	134399495	134401921	134400708	ENSG00000248559.1	+	antisense	KNOWN	RP11-215P8.3	1	2	0.395238
chr5	134402087	134411898	134406992	ENSG00000237190.3	-	protein_coding	KNOWN	CDKN2AIPNL	2	3	0.416023
chr5	134422838	134423335	134423086	ENSG00000243648.1	+	processed_pseudogene	KNOWN	RP11-215P8.1	1	1	0.502624
chr5	134429051	134460615	134444833	ENSG00000250564.1	-	lincRNA	KNOWN	RP11-215P8.4	1	3	0.418983
chr5	134436711	134492519	134464615	ENSG00000250994.1	+	lincRNA	KNOWN	AC005355.1	1	2	0.387977
chr5	134500178	134500284	134500231	ENSG00000207222.1	-	snRNA	KNOWN	RNU6-456P	1	1	0.403193
chr5	134506552	134509229	134507890	ENSG00000251169.2	+	lincRNA	KNOWN	AC005355.2	1	2	0.403193
chr5	134517810	134518092	134517951	ENSG00000240250.3	+	misc_RNA	KNOWN	RN7SL541P	1	1	0.610777
chr5	134522613	134523096	134522854	ENSG00000280420.1	-	TEC	KNOWN	AC005355.3	1	1	0.610777
chr5	134524312	134583230	134553771	ENSG00000043143.20	+	protein_coding	KNOWN	JADE2	11	12	0.783380
chr5	134601144	134649271	134625207	ENSG00000152700.13	-	protein_coding	KNOWN	SAR1B	11	8	0.533486
chr5	134634839	134634945	134634892	ENSG00000207459.1	-	snRNA	KNOWN	RNU6-1311P	1	1	0.790723
chr5	134648789	134727823	134688306	ENSG00000113615.12	+	protein_coding	KNOWN	SEC24A	3	23	0.259213
chr5	134701172	134701278	134701225	ENSG00000201298.1	-	snRNA	KNOWN	RNU6-1164P	1	1	0.369773
chr5	134715483	134715582	134715532	ENSG00000222266.1	+	snRNA	KNOWN	RNU6-757P	1	1	0.253355
chr5	134738501	134752160	134745330	ENSG00000164615.4	+	protein_coding	KNOWN	CAMLG	2	4	0.338143
chr5	134758771	134855133	134806952	ENSG00000145833.15	+	protein_coding	KNOWN	DDX46	12	23	0.443795
chr5	134804778	134805132	134804955	ENSG00000241179.1	-	processed_pseudogene	KNOWN	CTB-2L9.1	1	1	0.376088
chr5	134845680	134859737	134852708	ENSG00000181904.8	+	protein_coding	KNOWN	C5orf24	6	3	0.220156
chr5	134863091	134863433	134863262	ENSG00000270892.1	-	processed_pseudogene	KNOWN	AC006077.4	1	1	0.215623
chr5	134873803	134901525	134887664	ENSG00000113621.14	+	protein_coding	KNOWN	TXNDC15	10	5	0.246653
chr5	134904906	135007959	134956432	ENSG00000132570.14	+	protein_coding	KNOWN	PCBD2	4	8	0.036825
chr5	134905235	134905691	134905463	ENSG00000279799.1	+	TEC	KNOWN	AC006077.3	1	1	0.084458
chr5	134923303	134924049	134923676	ENSG00000244921.2	-	processed_pseudogene	KNOWN	MTCYBP18	1	1	0.177299
chr5	134924123	134924644	134924383	ENSG00000249119.1	+	processed_pseudogene	KNOWN	MTND6P4	1	1	0.177299
chr5	134924648	134926459	134925553	ENSG00000248923.1	-	processed_pseudogene	KNOWN	MTND5P11	1	1	0.177299
chr5	134926660	134928036	134927348	ENSG00000247627.2	-	processed_pseudogene	KNOWN	MTND4P12	1	1	0.177299
chr5	134928030	134928326	134928178	ENSG00000198868.3	-	processed_pseudogene	KNOWN	MTND4LP30	1	1	0.177299
chr5	134928039	134928112	134928075	ENSG00000263963.1	+	miRNA	KNOWN	MIR4461	1	1	0.177299
chr5	134928393	134928527	134928460	ENSG00000249192.1	-	processed_pseudogene	KNOWN	CTB-36O1.3	1	1	0.177299
chr5	134967906	135011707	134989806	ENSG00000152705.7	+	protein_coding	KNOWN	CATSPER3	2	8	0.086813
chr5	135027735	135034813	135031274	ENSG00000069011.15	-	protein_coding	KNOWN	PITX1	6	4	0.555849
chr5	135033280	135358219	135195749	ENSG00000224186.8	+	antisense	KNOWN	C5orf66	6	6	0.364211
chr5	135034521	135035894	135035207	ENSG00000277619.1	+	antisense	KNOWN	CTC-276P9.4	1	1	0.613108
chr5	135038831	135040047	135039439	ENSG00000249082.2	-	lincRNA	KNOWN	C5orf66-AS1	2	2	0.613108
chr5	135120526	135139681	135130103	ENSG00000248753.1	+	lincRNA	KNOWN	CTC-276P9.2	1	3	0.426195
chr5	135124380	135131249	135127814	ENSG00000248482.1	-	lincRNA	KNOWN	CTC-276P9.3	1	2	0.431569
chr5	135236234	135248179	135242206	ENSG00000249647.2	-	lincRNA	KNOWN	C5orf66-AS2	2	4	0.375785
chr5	135333900	135399914	135366907	ENSG00000113648.16	-	protein_coding	KNOWN	H2AFY	20	9	0.303942
chr5	135399280	135401296	135400288	ENSG00000270021.1	+	antisense	KNOWN	CTC-203F4.2	1	1	0.297934
chr5	135444214	135447348	135445781	ENSG00000251380.3	-	protein_coding	KNOWN	DCANP1	1	1	-0.241838
chr5	135444218	135452399	135448308	ENSG00000255833.1	-	protein_coding	KNOWN	TIFAB	1	2	-0.061285
chr5	135450613	135458697	135454655	ENSG00000249639.1	+	antisense	KNOWN	CTB-138E5.1	1	2	0.373623
chr5	135534282	135535949	135535115	ENSG00000181965.5	-	protein_coding	KNOWN	NEUROG1	1	1	0.139557
chr5	135559577	135634874	135597225	ENSG00000250167.1	+	antisense	KNOWN	CTC-321K16.1	2	4	-0.007493
chr5	135570679	135579279	135574979	ENSG00000145824.12	-	protein_coding	KNOWN	CXCL14	2	4	0.156441
chr5	135648584	135653935	135651259	ENSG00000251045.1	-	lincRNA	KNOWN	CTC-321K16.4	1	3	-0.176669
chr5	135713119	135713216	135713167	ENSG00000238393.1	-	miRNA	NOVEL	AC009009.1	1	1	-0.003489
chr5	135742462	135746356	135744409	ENSG00000223539.4	-	unprocessed_pseudogene	KNOWN	AC011431.1	1	2	0.083724
chr5	135801229	135801314	135801271	ENSG00000263840.1	-	miRNA	NOVEL	AC011431.2	1	1	-0.051372
chr5	135802985	135803075	135803030	ENSG00000265924.1	-	miRNA	KNOWN	MIR5692C1	1	1	-0.051372
chr5	135804505	135804593	135804549	ENSG00000264039.1	-	miRNA	NOVEL	AC114296.1	1	1	-0.051372
chr5	135812667	135826582	135819624	ENSG00000250378.1	+	lincRNA	KNOWN	RP11-119J18.1	1	2	-0.211789
chr5	135834649	135888637	135861643	ENSG00000145832.12	+	protein_coding	KNOWN	SLC25A48	7	7	0.004703
chr5	135892246	135895827	135894036	ENSG00000145839.1	-	protein_coding	KNOWN	IL9	1	5	0.282747
chr5	135897637	135900250	135898943	ENSG00000254239.1	+	lincRNA	KNOWN	GS1-39E22.2	1	2	0.282747
chr5	135900353	135918161	135909257	ENSG00000253927.1	-	lincRNA	KNOWN	GS1-39E22.1	1	5	0.136415
chr5	135922279	135955034	135938656	ENSG00000145826.8	-	protein_coding	KNOWN	LECT2	5	4	-0.181953
chr5	135930317	135951591	135940954	ENSG00000164616.15	+	transcribed_unitary_pseudogene	KNOWN	FBXL21	8	7	-0.233250
chr5	136028895	136063818	136046356	ENSG00000120708.16	+	protein_coding	KNOWN	TGFBI	15	17	0.628292
chr5	136080471	136080597	136080534	ENSG00000270123.3	-	vaultRNA	KNOWN	VTRNA2-1	1	1	0.575139
chr5	136080497	136080597	136080547	ENSG00000278815.1	-	misc_RNA	KNOWN	Vault	1	1	0.575139
chr5	136129507	136134890	136132198	ENSG00000164621.5	-	antisense	KNOWN	SMAD5-AS1	1	2	0.333346
chr5	136129516	136129781	136129648	ENSG00000277859.1	+	misc_RNA	NOVEL	SMAD5-AS1_1	1	1	0.148299
chr5	136132845	136188747	136160796	ENSG00000113658.16	+	protein_coding	KNOWN	SMAD5	12	8	0.091535
chr5	136133696	136133826	136133761	ENSG00000275646.1	+	misc_RNA	NOVEL	SMAD5-AS1_2	1	1	0.351960
chr5	136133912	136134035	136133973	ENSG00000277524.1	+	misc_RNA	NOVEL	SMAD5-AS1_3	1	1	0.351960
chr5	136134082	136134248	136134165	ENSG00000274934.1	+	misc_RNA	NOVEL	SMAD5-AS1_4	1	1	0.351960
chr5	136191468	136193134	136192301	ENSG00000271824.1	-	lincRNA	KNOWN	AC009014.3	1	1	0.147033
chr5	136213320	136365537	136289428	ENSG00000069018.17	-	protein_coding	KNOWN	TRPC7	7	12	-0.157313
chr5	136214048	136222159	136218103	ENSG00000248211.1	+	antisense	KNOWN	TRPC7-AS1	1	2	0.152533
chr5	136303757	136316100	136309928	ENSG00000250947.1	+	antisense	KNOWN	TRPC7-AS2	1	3	-0.072555
chr5	136376348	136397042	136386695	ENSG00000279240.1	-	lincRNA	KNOWN	AC063980.3	1	2	-0.523129
chr5	136381268	136381511	136381389	ENSG00000248351.1	-	processed_pseudogene	KNOWN	HSPD1P18	1	1	-0.548680
chr5	136428892	136429854	136429373	ENSG00000213568.4	+	processed_pseudogene	KNOWN	HNRNPA1P13	1	1	-0.280817
chr5	136466677	136520298	136493487	ENSG00000249803.5	+	lincRNA	KNOWN	RP11-114H21.2	2	3	-0.422070
chr5	136734927	136754686	136744806	ENSG00000250284.1	+	lincRNA	KNOWN	CTB-1I21.1	1	3	0.052373
chr5	136857628	136858342	136857985	ENSG00000248616.1	+	processed_pseudogene	KNOWN	CTB-1I21.2	1	1	-0.434756
chr5	136969200	136969306	136969253	ENSG00000222285.1	-	rRNA	KNOWN	RNA5SP193	1	1	-0.351060
chr5	136975298	137598379	137286838	ENSG00000152377.13	-	protein_coding	KNOWN	SPOCK1	11	11	0.140619
chr5	137533454	137533521	137533487	ENSG00000221612.1	+	miRNA	NOVEL	AC106775.1	1	1	0.141235
chr5	137617500	137736090	137676795	ENSG00000146021.14	-	protein_coding	KNOWN	KLHL3	14	15	0.002452
chr5	137647562	137647673	137647617	ENSG00000216009.2	-	miRNA	KNOWN	MIR874	1	1	0.135713
chr5	137745651	137754376	137750013	ENSG00000177733.6	-	protein_coding	KNOWN	HNRNPA0	1	1	-0.204610
chr5	137761546	137761936	137761741	ENSG00000270697.1	+	lincRNA	KNOWN	RP11-381K20.4	1	1	-0.528950
chr5	137801193	137810751	137805972	ENSG00000226306.6	+	transcribed_processed_pseudogene	KNOWN	NPY6R	2	2	-0.288923
chr5	137814333	137889336	137851834	ENSG00000250159.6	-	antisense	KNOWN	RP11-381K20.2	2	5	-0.174928
chr5	137867791	137887851	137877821	ENSG00000120729.9	+	protein_coding	KNOWN	MYOT	8	11	-0.026124
chr5	137887968	137942747	137915357	ENSG00000078795.16	+	protein_coding	KNOWN	PKD2L2	7	15	-0.094187
chr5	137937960	138051961	137994960	ENSG00000031003.10	-	protein_coding	KNOWN	FAM13B	11	23	-0.037141
chr5	137966337	137966444	137966390	ENSG00000277843.1	+	miRNA	NOVEL	AC106753.1	1	1	-0.104073
chr5	138032774	138037266	138035020	ENSG00000246323.2	+	antisense	KNOWN	RP11-325L7.1	1	2	0.150544
chr5	138039199	138039979	138039589	ENSG00000250260.1	+	lincRNA	KNOWN	RP11-325L7.2	1	2	0.150544
chr5	138069355	138069458	138069406	ENSG00000222924.1	-	snRNA	KNOWN	RNU6-1148P	1	1	0.162381
chr5	138083892	138092365	138088128	ENSG00000061492.11	+	protein_coding	KNOWN	WNT8A	4	8	0.211100
chr5	138115172	138139443	138127307	ENSG00000112981.4	-	protein_coding	KNOWN	NME5	6	6	0.072102
chr5	138116573	138116680	138116626	ENSG00000212460.1	+	snRNA	KNOWN	RNU6-460P	1	1	0.246877
chr5	138123011	138123111	138123061	ENSG00000199880.1	-	snRNA	KNOWN	RNU6-888P	1	1	0.246877
chr5	138139766	138178986	138159376	ENSG00000112983.17	-	protein_coding	KNOWN	BRD8	26	27	0.105185
chr5	138178719	138187715	138183217	ENSG00000112984.11	+	protein_coding	KNOWN	KIF20A	7	20	0.389378
chr5	138187648	138213343	138200495	ENSG00000094880.10	-	protein_coding	KNOWN	CDC23	9	16	0.185579
chr5	138252379	138274671	138263525	ENSG00000146013.10	-	protein_coding	KNOWN	GFRA3	2	8	0.173159
chr5	138266996	138267757	138267376	ENSG00000249851.1	-	processed_pseudogene	KNOWN	RP11-166J22.1	1	2	0.135713
chr5	138285265	138338355	138311810	ENSG00000158402.18	-	protein_coding	KNOWN	CDC25C	9	14	0.097368
chr5	138331935	138349729	138340832	ENSG00000120709.10	+	protein_coding	KNOWN	FAM53C	11	6	0.404701
chr5	138347027	138349641	138348334	ENSG00000249971.1	-	antisense	KNOWN	RP11-256P1.1	1	2	0.404701
chr5	138352596	138437028	138394812	ENSG00000120733.13	+	protein_coding	KNOWN	KDM3B	9	24	0.397047
chr5	138439017	138446969	138442993	ENSG00000132563.15	+	protein_coding	KNOWN	REEP2	11	8	0.360640
chr5	138454540	138454732	138454636	ENSG00000271196.1	-	processed_pseudogene	KNOWN	RP11-461O14.3	1	1	0.881774
chr5	138465490	138469315	138467402	ENSG00000120738.7	+	protein_coding	KNOWN	EGR1	1	2	0.881774
chr5	138473744	138474361	138474052	ENSG00000241458.1	+	processed_pseudogene	KNOWN	RPL7P19	1	1	0.595566
chr5	138506095	138543300	138524697	ENSG00000120705.12	-	protein_coding	KNOWN	ETF1	9	11	0.483608
chr5	138554882	138575444	138565163	ENSG00000113013.12	-	protein_coding	KNOWN	HSPA9	13	17	0.648558
chr5	138558970	138559039	138559004	ENSG00000222937.1	-	snoRNA	NOVEL	SNORD63	1	1	0.724849
chr5	138561043	138561110	138561076	ENSG00000206989.1	-	snoRNA	KNOWN	SNORD63	1	1	0.724849
chr5	138610967	138935034	138773000	ENSG00000044115.20	+	protein_coding	KNOWN	CTNNA1	44	19	0.323362
chr5	138620329	138620964	138620646	ENSG00000232174.3	+	processed_pseudogene	KNOWN	CTB-164L20.1	1	1	0.613338
chr5	138623479	138623582	138623530	ENSG00000238745.1	+	snoRNA	NOVEL	snoU13	1	1	0.613338
chr5	138744434	138753309	138748871	ENSG00000253404.1	-	antisense	KNOWN	AC034243.1	1	2	0.427733
chr5	138868923	138875368	138872145	ENSG00000146006.7	-	protein_coding	KNOWN	LRRTM2	4	2	0.297378
chr5	138946720	139293557	139120138	ENSG00000120725.12	-	protein_coding	KNOWN	SIL1	15	11	0.276554
chr5	139012329	139012441	139012385	ENSG00000201532.1	+	rRNA	KNOWN	RNA5SP194	1	1	-0.096275
chr5	139012647	139051203	139031925	ENSG00000249593.6	+	antisense	KNOWN	CTB-46B19.2	4	5	-0.005853
chr5	139035148	139035987	139035567	ENSG00000242683.1	-	processed_pseudogene	KNOWN	RPL12P21	1	3	0.046904
chr5	139221758	139221837	139221797	ENSG00000252533.1	+	snRNA	KNOWN	RNU6-572P	1	1	0.106276
chr5	139273752	139331677	139302714	ENSG00000280987.3	+	protein_coding	KNOWN	MATR3	13	20	0.125700
chr5	139274102	139283244	139278673	ENSG00000281398.2	+	processed_transcript	KNOWN	SNHG4	8	7	0.118709
chr5	139276180	139276320	139276250	ENSG00000252213.1	+	snoRNA	NOVEL	SNORA74	1	1	0.118709
chr5	139278781	139278978	139278879	ENSG00000200959.1	+	snoRNA	KNOWN	SNORA74A	1	1	0.118709
chr5	139278883	139279015	139278949	ENSG00000281220.1	+	miRNA	NOVEL	AC011404.1	1	1	0.118709
chr5	139293648	139331359	139312503	ENSG00000015479.17	+	protein_coding	KNOWN	MATR3	27	15	0.107421
chr5	139299852	139299968	139299910	ENSG00000199545.1	+	rRNA	KNOWN	RNA5SP195	1	1	0.327620
chr5	139333038	139333365	139333201	ENSG00000253015.1	-	misc_RNA	KNOWN	RN7SKP64	1	1	0.333653
chr5	139341587	139369720	139355653	ENSG00000120727.12	+	protein_coding	KNOWN	PAIP2	8	4	0.387356
chr5	139364677	139369717	139367197	ENSG00000272742.1	-	antisense	KNOWN	CTB-43P18.1	1	2	0.410263
chr5	139367196	139384553	139375874	ENSG00000170482.16	-	protein_coding	KNOWN	SLC23A1	7	15	0.481107
chr5	139387480	139390081	139388780	ENSG00000170476.15	-	protein_coding	KNOWN	MZB1	8	5	0.497717
chr5	139390592	139395713	139393152	ENSG00000228672.3	-	protein_coding	KNOWN	PROB1	1	1	0.588823
chr5	139396563	139404088	139400325	ENSG00000170469.10	-	protein_coding	KNOWN	SPATA24	7	6	0.588823
chr5	139408588	139444491	139426539	ENSG00000170464.9	-	protein_coding	KNOWN	DNAJC18	12	8	0.490471
chr5	139442316	139462707	139452511	ENSG00000279686.1	-	protein_coding	KNOWN	ECSCR	1	12	0.630799
chr5	139447907	139448017	139447962	ENSG00000200378.1	+	snRNA	KNOWN	RNU5B-4P	1	1	0.377613
chr5	139448556	139462743	139455649	ENSG00000249751.3	-	protein_coding	KNOWN	ECSCR	1	10	0.742548
chr5	139475534	139482935	139479234	ENSG00000184584.12	-	protein_coding	KNOWN	TMEM173	15	8	0.635614
chr5	139492538	139493105	139492821	ENSG00000249689.1	+	processed_pseudogene	KNOWN	AC138517.5	1	1	0.457276
chr5	139494256	139496116	139495186	ENSG00000249215.1	+	processed_pseudogene	KNOWN	AC138517.4	1	1	0.457276
chr5	139526431	139628433	139577432	ENSG00000131508.15	+	protein_coding	KNOWN	UBE2D2	8	8	0.292560
chr5	139554900	139555001	139554950	ENSG00000207020.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.391006
chr5	139612002	139612363	139612182	ENSG00000275506.1	-	processed_pseudogene	KNOWN	CTD-2062A1.2	1	1	0.099769
chr5	139644460	139645002	139644731	ENSG00000272255.1	-	lincRNA	KNOWN	CTD-3224K15.3	1	1	0.668392
chr5	139647299	139683882	139665590	ENSG00000171604.11	+	protein_coding	KNOWN	CXXC5	16	3	0.966521
chr5	139648999	139649728	139649363	ENSG00000250635.1	-	lincRNA	KNOWN	CTD-3224K15.2	1	2	0.668392
chr5	139684645	139745010	139714827	ENSG00000249526.1	+	lincRNA	KNOWN	CTB-35F21.1	1	6	0.699408
chr5	139717985	139718090	139718037	ENSG00000200756.1	-	snRNA	KNOWN	RNU6-236P	1	1	0.453630
chr5	139741349	139746223	139743786	ENSG00000249131.1	-	lincRNA	KNOWN	CTB-35F21.2	1	3	0.418802
chr5	139772528	139775406	139773967	ENSG00000251387.1	-	lincRNA	KNOWN	CTB-35F21.3	1	2	0.411002
chr5	139775305	139775472	139775388	ENSG00000271792.1	+	lincRNA	KNOWN	CTB-35F21.5	1	1	0.411002
chr5	139795821	139844466	139820143	ENSG00000146005.3	+	protein_coding	KNOWN	PSD2	1	15	0.543005
chr5	139846779	140043299	139945039	ENSG00000158458.19	-	protein_coding	KNOWN	NRG2	9	11	0.130463
chr5	139848290	139856389	139852339	ENSG00000250692.1	+	antisense	KNOWN	CTB-35F21.4	1	3	0.109865
chr5	140019492	140019592	140019542	ENSG00000207317.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.068533
chr5	140072857	140108630	140090743	ENSG00000245146.6	-	antisense	KNOWN	LINC01024	7	4	-0.045627
chr5	140107777	140125619	140116698	ENSG00000185129.5	+	protein_coding	KNOWN	PURA	3	2	0.119084
chr5	140125935	140129392	140127663	ENSG00000182700.4	+	protein_coding	KNOWN	IGIP	1	1	0.142976
chr5	140157319	140173051	140165185	ENSG00000254363.6	+	processed_transcript	KNOWN	CTB-131B5.5	2	5	0.565032
chr5	140174642	140282052	140228347	ENSG00000120306.9	+	protein_coding	KNOWN	CYSTM1	4	4	0.377764
chr5	140195702	140195791	140195746	ENSG00000264890.1	-	miRNA	NOVEL	AC011379.1	1	1	0.091992
chr5	140200163	140203187	140201675	ENSG00000250069.1	+	sense_intronic	KNOWN	CTB-131B5.2	1	1	0.091992
chr5	140245039	140303121	140274080	ENSG00000113068.9	-	protein_coding	KNOWN	PFDN1	7	5	0.455021
chr5	140287313	140289276	140288294	ENSG00000281227.1	+	protein_coding	KNOWN	AC011380.1	1	3	0.274645
chr5	140332843	140346631	140339737	ENSG00000113070.7	-	protein_coding	KNOWN	HBEGF	3	6	0.576191
chr5	140348484	140357794	140353139	ENSG00000253965.1	-	antisense	KNOWN	CTC-329D1.3	1	2	0.588880
chr5	140360202	140375143	140367672	ENSG00000113073.14	+	protein_coding	KNOWN	SLC4A9	6	22	0.591285
chr5	140370891	140401367	140386129	ENSG00000249637.1	-	antisense	KNOWN	CTC-329D1.2	1	2	0.432416
chr5	140397323	140397444	140397383	ENSG00000222790.1	-	snRNA	KNOWN	RNU4-14P	1	1	0.165573
chr5	140401814	140539856	140470835	ENSG00000131503.20	+	protein_coding	KNOWN	ANKHD1	21	34	0.096061
chr5	140401908	140549569	140475738	ENSG00000254996.5	+	protein_coding	KNOWN	ANKHD1-EIF4EBP3	3	36	0.103074
chr5	140527352	140527428	140527390	ENSG00000200051.1	-	snoRNA	NOVEL	SNORD45	1	1	0.100259
chr5	140537340	140558310	140547825	ENSG00000213523.9	-	protein_coding	KNOWN	SRA1	6	5	0.333829
chr5	140547666	140549578	140548622	ENSG00000243056.1	+	protein_coding	KNOWN	EIF4EBP3	1	3	0.203353
chr5	140558268	140593752	140576010	ENSG00000113108.17	-	protein_coding	KNOWN	APBB3	24	13	0.510854
chr5	140563671	140563751	140563711	ENSG00000274910.1	-	miRNA	KNOWN	MIR6831	1	1	0.532564
chr5	140564456	140569103	140566779	ENSG00000176087.14	+	protein_coding	KNOWN	SLC35A4	4	3	0.532564
chr5	140579667	140579792	140579729	ENSG00000200235.1	+	snoRNA	NOVEL	SNORA27	1	1	0.564745
chr5	140581504	140582335	140581919	ENSG00000251453.1	+	processed_pseudogene	KNOWN	HAUS1P1	1	1	0.564745
chr5	140609085	140609400	140609242	ENSG00000240518.2	+	processed_pseudogene	KNOWN	RP11-515C16.1	1	1	0.155807
chr5	140631728	140633701	140632714	ENSG00000170458.13	-	protein_coding	KNOWN	CD14	5	3	0.597883
chr5	140638740	140647785	140643262	ENSG00000131495.8	-	protein_coding	KNOWN	NDUFA2	4	3	0.597883
chr5	140639427	140645408	140642417	ENSG00000113119.12	+	protein_coding	KNOWN	TMCO6	14	12	0.597883
chr5	140647058	140662479	140654768	ENSG00000113141.15	+	protein_coding	KNOWN	IK	12	21	0.462348
chr5	140647844	140647926	140647885	ENSG00000264052.1	+	miRNA	KNOWN	MIR3655	1	1	0.597883
chr5	140664676	140674124	140669400	ENSG00000120314.18	+	protein_coding	KNOWN	WDR55	5	8	0.615913
chr5	140670794	140673586	140672190	ENSG00000256453.1	-	protein_coding	KNOWN	DND1	1	4	0.855292
chr5	140673173	140692024	140682598	ENSG00000170445.12	-	protein_coding	KNOWN	HARS	13	13	0.826864
chr5	140691426	140699291	140695358	ENSG00000112855.14	+	protein_coding	KNOWN	HARS2	12	13	0.590654
chr5	140698680	140706676	140702678	ENSG00000146007.10	+	protein_coding	KNOWN	ZMAT2	3	6	0.590654
chr5	140711275	140711373	140711324	ENSG00000199990.1	+	misc_RNA	KNOWN	VTRNA1-1	1	1	0.181259
chr5	140718925	140719013	140718969	ENSG00000202111.1	+	misc_RNA	KNOWN	VTRNA1-2	1	1	0.181259
chr5	140726158	140726246	140726202	ENSG00000202515.1	+	misc_RNA	KNOWN	VTRNA1-3	1	1	0.181259
chr5	140732290	140732863	140732576	ENSG00000250515.1	-	processed_pseudogene	KNOWN	RP11-515C16.7	1	2	0.159807
chr5	140764110	140764821	140764465	ENSG00000248106.2	+	processed_pseudogene	KNOWN	AC005609.2	1	1	-0.095635
chr5	140786136	141012347	140899241	ENSG00000204970.9	+	protein_coding	KNOWN	PCDHA1	3	4	-0.385606
chr5	140788457	140822193	140805325	ENSG00000279726.1	-	antisense	KNOWN	AC005609.16	2	3	-0.362061
chr5	140794852	141012344	140903598	ENSG00000204969.6	+	protein_coding	KNOWN	PCDHA2	3	4	-0.387972
chr5	140801028	141012344	140906686	ENSG00000255408.3	+	protein_coding	KNOWN	PCDHA3	2	4	-0.387459
chr5	140806929	141012344	140909636	ENSG00000204967.10	+	protein_coding	KNOWN	PCDHA4	4	5	-0.386941
chr5	140821604	141012344	140916974	ENSG00000204965.8	+	protein_coding	KNOWN	PCDHA5	3	5	-0.391456
chr5	140827958	141012344	140920151	ENSG00000081842.17	+	protein_coding	KNOWN	PCDHA6	3	4	-0.394339
chr5	140834248	141012344	140923296	ENSG00000204963.5	+	protein_coding	KNOWN	PCDHA7	2	4	-0.390528
chr5	140841187	141012344	140926765	ENSG00000204962.5	+	protein_coding	KNOWN	PCDHA8	2	4	-0.382213
chr5	140847463	141012344	140929903	ENSG00000204961.6	+	protein_coding	KNOWN	PCDHA9	2	4	-0.374090
chr5	140849105	140849696	140849400	ENSG00000278907.1	-	antisense	KNOWN	AC005609.19	1	1	-0.595624
chr5	140855883	141012344	140934113	ENSG00000250120.6	+	protein_coding	KNOWN	PCDHA10	3	4	-0.376318
chr5	140861224	140863521	140862372	ENSG00000249504.3	+	transcribed_unprocessed_pseudogene	KNOWN	PCDHA14	1	1	-0.219367
chr5	140867513	140867959	140867736	ENSG00000278946.1	-	antisense	KNOWN	AC005609.20	1	1	-0.219367
chr5	140868183	141012344	140940263	ENSG00000249158.6	+	protein_coding	KNOWN	PCDHA11	3	5	-0.389709
chr5	140875302	141012344	140943823	ENSG00000251664.3	+	protein_coding	KNOWN	PCDHA12	2	4	-0.390046
chr5	140875346	140875922	140875634	ENSG00000278915.1	-	antisense	KNOWN	AC005609.18	1	1	-0.439333
chr5	140878073	140882642	140880357	ENSG00000278901.1	-	antisense	KNOWN	AC005609.17	1	2	-0.439333
chr5	140882208	141012344	140947276	ENSG00000239389.7	+	protein_coding	KNOWN	PCDHA13	3	5	-0.387430
chr5	140926369	141012344	140969356	ENSG00000248383.4	+	protein_coding	KNOWN	PCDHAC1	2	4	-0.371865
chr5	140966212	140966490	140966351	ENSG00000279028.1	-	antisense	KNOWN	CTC-270D5.2	1	1	-0.664083
chr5	140966235	141012344	140989289	ENSG00000243232.4	+	protein_coding	KNOWN	PCDHAC2	4	4	-0.355785
chr5	141046260	141096402	141071331	ENSG00000279047.3	-	antisense	KNOWN	CTC-270D5.1	5	4	-0.366957
chr5	141051135	141059344	141055239	ENSG00000171815.5	+	protein_coding	KNOWN	PCDHB1	1	1	-0.292438
chr5	141078076	141084481	141081278	ENSG00000279558.1	+	lincRNA	KNOWN	CH17-140K24.1	1	3	-0.381462
chr5	141094578	141098703	141096640	ENSG00000112852.6	+	protein_coding	KNOWN	PCDHB2	5	2	-0.364724
chr5	141100242	141174391	141137316	ENSG00000272154.4	-	antisense	KNOWN	AC005754.7	4	4	-0.352328
chr5	141100473	141103827	141102150	ENSG00000113205.5	+	protein_coding	KNOWN	PCDHB3	2	2	-0.364724
chr5	141118680	141120765	141119722	ENSG00000272108.1	+	lincRNA	KNOWN	AC005754.8	1	1	-0.239459
chr5	141121799	141125623	141123711	ENSG00000081818.3	+	protein_coding	KNOWN	PCDHB4	2	2	-0.239459
chr5	141135218	141138625	141136921	ENSG00000113209.8	+	protein_coding	KNOWN	PCDHB5	2	2	-0.334823
chr5	141136683	141245380	141191031	ENSG00000280029.3	-	antisense	KNOWN	CH17-140K24.2	5	3	-0.272673
chr5	141150022	141153287	141151654	ENSG00000113211.5	+	protein_coding	KNOWN	PCDHB6	2	2	-0.466218
chr5	141155996	141159061	141157528	ENSG00000255622.3	+	transcribed_unprocessed_pseudogene	KNOWN	PCDHB17P	2	1	-0.466218
chr5	141168231	141168893	141168562	ENSG00000280336.1	+	lincRNA	KNOWN	CH17-140K24.3	1	1	-0.466218
chr5	141172619	141176383	141174501	ENSG00000113212.6	+	protein_coding	KNOWN	PCDHB7	1	1	-0.399861
chr5	141177790	141180529	141179159	ENSG00000120322.3	+	protein_coding	KNOWN	PCDHB8	1	1	-0.399861
chr5	141177849	141182369	141180109	ENSG00000279472.1	+	processed_transcript	KNOWN	CH17-140K24.4	1	2	-0.399861
chr5	141181399	141186399	141183899	ENSG00000272674.3	+	protein_coding	KNOWN	PCDHB16	2	2	-0.399861
chr5	141182409	141188582	141185495	ENSG00000279068.1	+	protein_coding	KNOWN	CH17-140K24.5	2	3	-0.399861
chr5	141182560	141195642	141189101	ENSG00000120324.7	+	protein_coding	KNOWN	PCDHB10	2	4	-0.286912
chr5	141183401	141201396	141192398	ENSG00000278936.1	-	antisense	KNOWN	CH17-140K24.7	2	2	-0.234022
chr5	141187127	141191541	141189334	ENSG00000177839.6	+	protein_coding	KNOWN	PCDHB9	3	2	-0.308387
chr5	141191599	141194088	141192843	ENSG00000279375.1	-	antisense	KNOWN	CH17-140K24.6	1	2	-0.138014
chr5	141199582	141203779	141201680	ENSG00000197479.6	+	protein_coding	KNOWN	PCDHB11	2	2	-0.138014
chr5	141208697	141212571	141210634	ENSG00000120328.6	+	protein_coding	KNOWN	PCDHB12	3	2	-0.013237
chr5	141213919	141218979	141216449	ENSG00000187372.11	+	protein_coding	KNOWN	PCDHB13	1	1	0.049928
chr5	141222932	141227759	141225345	ENSG00000120327.6	+	protein_coding	KNOWN	PCDHB14	2	2	0.049928
chr5	141223372	141245861	141234616	ENSG00000279983.1	+	protein_coding	KNOWN	CH17-140K24.8	1	2	-0.264875
chr5	141234333	141237529	141235931	ENSG00000146001.5	+	transcribed_unprocessed_pseudogene	KNOWN	PCDHB18P	3	2	-0.396397
chr5	141239923	141243034	141241478	ENSG00000262096.2	+	transcribed_unprocessed_pseudogene	KNOWN	PCDHB19P	2	1	-0.396397
chr5	141245349	141249365	141247357	ENSG00000113248.5	+	protein_coding	KNOWN	PCDHB15	2	2	-0.396397
chr5	141259235	141261364	141260299	ENSG00000277795.1	+	processed_pseudogene	KNOWN	AC005752.10	1	3	-0.120815
chr5	141260225	141320821	141290523	ENSG00000178913.7	-	protein_coding	KNOWN	TAF7	3	3	-0.140739
chr5	141302629	141304045	141303337	ENSG00000120329.6	-	protein_coding	KNOWN	SLC25A2	1	1	0.014916
chr5	141326210	141329357	141327783	ENSG00000272070.1	+	lincRNA	KNOWN	AC005618.6	2	2	0.036649
chr5	141330571	141512981	141421776	ENSG00000204956.5	+	protein_coding	KNOWN	PCDHGA1	2	4	0.218531
chr5	141338760	141512979	141425869	ENSG00000081853.14	+	protein_coding	KNOWN	PCDHGA2	2	4	0.213475
chr5	141343829	141512979	141428404	ENSG00000254245.2	+	protein_coding	KNOWN	PCDHGA3	3	5	0.210103
chr5	141350102	141512979	141431540	ENSG00000254221.2	+	protein_coding	KNOWN	PCDHGB1	2	4	0.205865
chr5	141350109	141350662	141350385	ENSG00000280026.1	-	antisense	KNOWN	AC005618.8	1	1	-0.030865
chr5	141355025	141512979	141434002	ENSG00000262576.2	+	protein_coding	KNOWN	PCDHGA4	2	4	0.213243
chr5	141360042	141512979	141436510	ENSG00000253910.2	+	protein_coding	KNOWN	PCDHGB2	2	4	0.221251
chr5	141364232	141512979	141438605	ENSG00000253485.2	+	protein_coding	KNOWN	PCDHGA5	2	4	0.228353
chr5	141370264	141512979	141441621	ENSG00000262209.2	+	protein_coding	KNOWN	PCDHGB3	2	4	0.238678
chr5	141373914	141512979	141443446	ENSG00000253731.2	+	protein_coding	KNOWN	PCDHGA6	2	4	0.236831
chr5	141382739	141512979	141447859	ENSG00000253537.2	+	protein_coding	KNOWN	PCDHGA7	2	4	0.231940
chr5	141387698	141512979	141450338	ENSG00000253953.2	+	protein_coding	KNOWN	PCDHGB4	2	4	0.228889
chr5	141390157	141512979	141451568	ENSG00000253767.2	+	protein_coding	KNOWN	PCDHGA8	2	4	0.227729
chr5	141397987	141512979	141455483	ENSG00000276547.1	+	protein_coding	KNOWN	PCDHGB5	2	4	0.245709
chr5	141402932	141512979	141457955	ENSG00000261934.2	+	protein_coding	KNOWN	PCDHGA9	2	4	0.258383
chr5	141408021	141512979	141460500	ENSG00000253305.2	+	protein_coding	KNOWN	PCDHGB6	2	4	0.272672
chr5	141412987	141512979	141462983	ENSG00000253846.2	+	protein_coding	KNOWN	PCDHGA10	2	4	0.280713
chr5	141417645	141512979	141465312	ENSG00000254122.2	+	protein_coding	KNOWN	PCDHGB7	2	4	0.284260
chr5	141421047	141512979	141467013	ENSG00000253873.5	+	protein_coding	KNOWN	PCDHGA11	3	4	0.287077
chr5	141426286	141429158	141427722	ENSG00000248449.2	+	unitary_pseudogene	KNOWN	PCDHGB8P	2	1	0.208133
chr5	141427295	141427752	141427523	ENSG00000279855.1	-	antisense	KNOWN	AC005618.9	1	1	0.208133
chr5	141430589	141512979	141471784	ENSG00000253159.2	+	protein_coding	KNOWN	PCDHGA12	2	4	0.296127
chr5	141439853	141442449	141441151	ENSG00000276545.1	+	unprocessed_pseudogene	KNOWN	PCDHGB9P	1	2	0.221034
chr5	141468465	141471528	141469996	ENSG00000273557.1	+	sense_intronic	KNOWN	CTD-2024I7.18	1	2	0.214771
chr5	141475947	141512979	141494463	ENSG00000240184.6	+	protein_coding	KNOWN	PCDHGC3	8	5	0.354746
chr5	141479316	141479625	141479470	ENSG00000242020.3	+	misc_RNA	KNOWN	RN7SL68P	1	1	0.114832
chr5	141479535	141479617	141479576	ENSG00000281646.1	+	miRNA	NOVEL	AC008781.1	1	1	0.114832
chr5	141484997	141512979	141498988	ENSG00000242419.5	+	protein_coding	KNOWN	PCDHGC4	4	4	0.432339
chr5	141489121	141512979	141501050	ENSG00000240764.3	+	protein_coding	KNOWN	PCDHGC5	2	4	0.487223
chr5	141515016	141619055	141567035	ENSG00000131504.15	-	protein_coding	KNOWN	DIAPH1	14	28	0.282543
chr5	141558311	141565263	141561787	ENSG00000246422.2	+	antisense	KNOWN	CTD-2024I7.13	1	3	0.056586
chr5	141588935	141589142	141589038	ENSG00000240974.1	+	processed_pseudogene	KNOWN	CTD-2024I7.1	1	1	0.167719
chr5	141618414	141626481	141622447	ENSG00000228737.2	+	antisense	KNOWN	AC008781.7	1	3	0.445224
chr5	141620876	141636870	141628873	ENSG00000171720.9	-	protein_coding	KNOWN	HDAC3	16	15	0.411083
chr5	141636950	141641077	141639013	ENSG00000164620.8	+	protein_coding	KNOWN	RELL2	7	8	0.365753
chr5	141639302	141651419	141645360	ENSG00000197948.10	-	protein_coding	KNOWN	FCHSD1	10	20	0.417400
chr5	141653401	141682221	141667811	ENSG00000120318.15	-	protein_coding	KNOWN	ARAP3	7	33	0.848091
chr5	141825708	141826325	141826016	ENSG00000278925.1	-	TEC	KNOWN	AC005753.1	1	1	0.555392
chr5	141853111	141879246	141866178	ENSG00000156453.13	-	protein_coding	KNOWN	PCDH1	8	5	0.814535
chr5	141896168	141896689	141896428	ENSG00000226040.3	-	processed_pseudogene	KNOWN	AC005740.3	1	1	0.121739
chr5	141923808	141942047	141932927	ENSG00000081791.8	+	protein_coding	KNOWN	KIAA0141	7	13	0.478253
chr5	141943585	141969741	141956663	ENSG00000113555.5	-	protein_coding	KNOWN	PCDH12	3	4	0.503253
chr5	141952419	141953375	141952897	ENSG00000271871.1	+	antisense	KNOWN	AC005740.6	1	1	0.501383
chr5	141958328	141990291	141974309	ENSG00000013561.17	+	protein_coding	KNOWN	RNF14	16	9	0.412501
chr5	141970637	141982687	141976662	ENSG00000254099.1	-	antisense	KNOWN	AC005740.5	1	3	0.363294
chr5	141991749	142013041	142002395	ENSG00000113552.15	-	protein_coding	KNOWN	GNPDA1	13	8	0.223138
chr5	142036707	142037125	142036916	ENSG00000250347.1	-	processed_pseudogene	KNOWN	AC005740.4	1	1	0.325191
chr5	142108505	142154443	142131474	ENSG00000131507.10	+	protein_coding	KNOWN	NDFIP1	4	8	0.059171
chr5	142165767	142168387	142167077	ENSG00000280047.1	+	TEC	KNOWN	CTC-463A16.1	1	1	0.073844
chr5	142310427	142326455	142318441	ENSG00000187678.8	-	protein_coding	KNOWN	SPRY4	5	3	0.494318
chr5	142317620	142318322	142317971	ENSG00000281881.1	-	lincRNA	KNOWN	SPRY4-IT1	1	1	0.494318
chr5	142317830	142317920	142317875	ENSG00000277968.1	+	misc_RNA	NOVEL	SPRY4-IT1_1	1	1	0.494318
chr5	142318047	142318167	142318107	ENSG00000274721.1	+	misc_RNA	NOVEL	SPRY4-IT1_2	1	1	0.494318
chr5	142325293	142672001	142498647	ENSG00000231185.6	+	antisense	KNOWN	AC005592.2	6	4	0.286577
chr5	142534255	142534345	142534300	ENSG00000280643.1	-	miRNA	NOVEL	AC005215.1	1	1	-0.069371
chr5	142566700	142567076	142566888	ENSG00000225147.1	+	processed_pseudogene	KNOWN	RPS12P10	1	1	0.279195
chr5	142592178	142698070	142645124	ENSG00000113578.17	-	protein_coding	KNOWN	FGF1	16	5	0.285780
chr5	142703782	142705421	142704601	ENSG00000261757.1	+	lincRNA	KNOWN	AC005592.3	1	1	0.319884
chr5	142745600	142760998	142753299	ENSG00000236714.1	+	lincRNA	KNOWN	AC005592.1	1	4	0.212204
chr5	142770384	143229011	142999697	ENSG00000145819.15	+	protein_coding	KNOWN	ARHGAP26	20	23	0.163687
chr5	142859604	142868922	142864263	ENSG00000226272.5	-	antisense	KNOWN	ARHGAP26-AS1	3	6	0.255772
chr5	143192500	143194166	143193333	ENSG00000230789.1	+	sense_intronic	KNOWN	ARHGAP26-IT1	1	2	0.154053
chr5	143277931	143435512	143356721	ENSG00000113580.14	-	protein_coding	KNOWN	NR3C1	16	10	0.073050
chr5	143332605	143333239	143332922	ENSG00000231579.3	+	processed_pseudogene	KNOWN	RPL7P21	1	1	-0.100653
chr5	143375628	143375883	143375755	ENSG00000279679.1	-	TEC	KNOWN	RP11-278J6.5	1	1	0.250690
chr5	143406959	143407420	143407189	ENSG00000279130.1	+	TEC	KNOWN	RP11-278J6.4	1	1	0.134741
chr5	143489855	143531350	143510602	ENSG00000249429.1	-	lincRNA	KNOWN	CTD-2050E21.1	1	2	0.008945
chr5	143542514	143542587	143542550	ENSG00000253023.1	-	snRNA	KNOWN	RNU7-156P	1	1	-0.108148
chr5	143559219	143562548	143560883	ENSG00000251205.2	+	lincRNA	KNOWN	CTD-2050E21.2	1	4	-0.124820
chr5	143605628	143828772	143717200	ENSG00000249881.1	+	sense_overlapping	KNOWN	CTB-57H20.1	1	5	0.002504
chr5	143679860	143679971	143679915	ENSG00000266478.1	+	miRNA	KNOWN	MIR5197	1	1	-0.263273
chr5	143752090	143752704	143752397	ENSG00000225869.4	-	processed_pseudogene	KNOWN	CTB-70D19.1	1	1	0.129860
chr5	143812161	143820719	143816440	ENSG00000158497.2	+	protein_coding	KNOWN	HMHB1	1	2	0.238213
chr5	144140879	144141166	144141022	ENSG00000239390.3	+	misc_RNA	KNOWN	RN7SL87P	1	1	-0.067075
chr5	144158159	144170714	144164436	ENSG00000145817.16	-	protein_coding	KNOWN	YIPF5	6	6	-0.400886
chr5	144170832	144485686	144328259	ENSG00000183775.10	+	protein_coding	KNOWN	KCTD16	2	4	-0.148223
chr5	144369334	144385310	144377322	ENSG00000249605.1	+	sense_intronic	KNOWN	CTC-218H9.1	1	5	-0.236570
chr5	144439206	144439478	144439342	ENSG00000250972.1	+	processed_pseudogene	KNOWN	CKS1BP5	1	1	-0.115166
chr5	144522140	144522988	144522564	ENSG00000213488.4	+	processed_pseudogene	KNOWN	CTB-85P21.1	1	2	0.030216
chr5	144535354	144535670	144535512	ENSG00000201423.1	-	misc_RNA	KNOWN	RN7SKP246	1	1	0.193437
chr5	144984708	144984852	144984780	ENSG00000281461.1	-	miRNA	NOVEL	AC005371.1	1	1	-0.190647
chr5	145001853	145005789	145003821	ENSG00000249229.2	-	processed_pseudogene	KNOWN	NAMPTP2	1	2	-0.229936
chr5	145197775	145197859	145197817	ENSG00000221467.1	+	miRNA	NOVEL	AC132803.1	1	1	-0.288151
chr5	145222610	145228982	145225796	ENSG00000251031.1	-	lincRNA	KNOWN	CTC-367F4.1	1	2	-0.212863
chr5	145228811	145230054	145229432	ENSG00000215325.4	+	processed_pseudogene	KNOWN	ASS1P10	1	1	-0.200129
chr5	145337932	145381670	145359801	ENSG00000250842.1	-	lincRNA	KNOWN	CTC-806A22.1	1	2	-0.021427
chr5	145429868	145451099	145440483	ENSG00000248125.1	+	lincRNA	KNOWN	CTB-73N10.1	2	3	0.074498
chr5	145471799	145835369	145653584	ENSG00000186314.11	-	protein_coding	KNOWN	PRELID2	9	8	-0.112411
chr5	145728360	145729349	145728854	ENSG00000249363.1	-	processed_pseudogene	KNOWN	CTB-78O21.1	1	2	-0.362267
chr5	145859733	145872968	145866350	ENSG00000204928.1	-	protein_coding	KNOWN	GRXCR2	1	3	0.080310
chr5	145936579	146081791	146009185	ENSG00000156463.17	+	protein_coding	KNOWN	SH3RF2	7	10	0.057373
chr5	145997218	145998003	145997610	ENSG00000248493.1	+	processed_pseudogene	KNOWN	AC005351.1	1	1	0.212917
chr5	146084386	146104369	146094377	ENSG00000173261.8	-	protein_coding	KNOWN	PLAC8L1	2	4	0.017512
chr5	146099406	146120412	146109909	ENSG00000251556.1	+	antisense	KNOWN	RP11-118M9.3	1	3	0.100643
chr5	146113038	146182660	146147849	ENSG00000133706.17	-	protein_coding	KNOWN	LARS	16	32	0.138024
chr5	146137755	146138381	146138068	ENSG00000239602.1	+	processed_pseudogene	KNOWN	RP11-449H3.1	1	2	0.212286
chr5	146138771	146139008	146138889	ENSG00000239317.1	+	processed_pseudogene	KNOWN	RP11-449H3.2	1	1	0.212286
chr5	146203550	146339251	146271400	ENSG00000275740.1	+	protein_coding	KNOWN	RP11-449H3.3	1	20	0.100385
chr5	146203600	146289132	146246366	ENSG00000091009.7	+	protein_coding	KNOWN	RBM27	2	21	0.204834
chr5	146245191	146245253	146245222	ENSG00000238374.1	-	snRNA	KNOWN	RNU7-180P	1	1	0.177383
chr5	146307098	146376963	146342030	ENSG00000250025.2	-	antisense	KNOWN	CTC-359M8.1	2	3	-0.021679
chr5	146339024	146340520	146339772	ENSG00000091010.4	+	protein_coding	KNOWN	POU4F3	1	2	-0.229936
chr5	146375591	146376219	146375905	ENSG00000271724.1	-	sense_intronic	KNOWN	CTC-359M8.3	1	2	0.058243
chr5	146400981	146407359	146404170	ENSG00000248842.1	+	lincRNA	KNOWN	CTB-1H10.1	1	2	0.091992
chr5	146447311	146511961	146479636	ENSG00000113649.11	+	protein_coding	KNOWN	TCERG1	16	23	-0.259079
chr5	146510116	146510271	146510193	ENSG00000277568.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.179605
chr5	146513103	146516190	146514646	ENSG00000173250.2	-	protein_coding	KNOWN	GPR151	1	1	-0.179605
chr5	146563226	146617004	146590115	ENSG00000250407.1	+	antisense	KNOWN	CTB-99A3.1	1	4	-0.128708
chr5	146581146	147084784	146832965	ENSG00000156475.18	-	protein_coding	KNOWN	PPP2R2B	21	11	-0.334746
chr5	146656401	146656695	146656548	ENSG00000241291.3	-	misc_RNA	KNOWN	RN7SL791P	1	1	-0.363891
chr5	146706381	146707600	146706990	ENSG00000248568.1	-	processed_pseudogene	KNOWN	KRT8P48	1	1	-0.082259
chr5	146734835	146734904	146734869	ENSG00000265875.1	+	miRNA	NOVEL	AC011357.1	1	1	-0.301672
chr5	146914207	146919506	146916856	ENSG00000249553.1	-	sense_intronic	KNOWN	PPP2R2B-IT1	1	4	-0.110501
chr5	147180204	147234859	147207531	ENSG00000250343.1	-	antisense	KNOWN	CTC-255N20.1	1	3	-0.282047
chr5	147234963	147387852	147311407	ENSG00000169302.14	+	protein_coding	KNOWN	STK32A	9	14	-0.354111
chr5	147390811	147510056	147450433	ENSG00000113657.12	-	protein_coding	KNOWN	DPYSL3	9	14	0.101784
chr5	147401760	147401996	147401878	ENSG00000272239.1	+	antisense	KNOWN	CTB-108O6.2	1	1	0.020439
chr5	147559994	147662009	147611001	ENSG00000280780.2	+	antisense	KNOWN	JAKMIP2-AS1	4	5	-0.229076
chr5	147585439	147782848	147684143	ENSG00000176049.15	-	protein_coding	KNOWN	JAKMIP2	6	22	-0.362726
chr5	147824568	147831786	147828177	ENSG00000164266.10	-	protein_coding	KNOWN	SPINK1	3	4	-0.415103
chr5	147851644	147852659	147852151	ENSG00000249518.1	-	processed_pseudogene	KNOWN	CTC-327F10.1	1	1	-0.442070
chr5	147870682	147882191	147876436	ENSG00000164265.8	+	protein_coding	KNOWN	SCGB3A2	4	3	-0.142913
chr5	147880726	147906538	147893632	ENSG00000178776.4	-	protein_coding	KNOWN	C5orf46	3	4	-0.194429
chr5	147886086	147886878	147886482	ENSG00000248362.1	-	antisense	KNOWN	CTC-327F10.5	1	1	-0.142913
chr5	147887112	147887704	147887408	ENSG00000251320.1	+	antisense	KNOWN	CTC-327F10.4	1	1	-0.142913
chr5	147922179	147923421	147922800	ENSG00000250346.1	+	processed_pseudogene	KNOWN	EEF1GP2	1	1	-0.399861
chr5	148025683	148137289	148081486	ENSG00000133710.15	+	protein_coding	KNOWN	SPINK5	9	34	-0.575578
chr5	148169733	148175398	148172565	ENSG00000196800.6	+	protein_coding	KNOWN	SPINK14	2	4	-0.304126
chr5	148202794	148215137	148208965	ENSG00000178172.6	+	protein_coding	KNOWN	SPINK6	3	5	-0.750645
chr5	148221360	148221642	148221501	ENSG00000249503.1	-	processed_pseudogene	KNOWN	HMGN1P16	1	1	-0.772781
chr5	148238570	148242594	148240582	ENSG00000248109.1	+	lincRNA	KNOWN	CTC-295J13.3	1	2	-0.731851
chr5	148268180	148286254	148277217	ENSG00000214510.9	+	protein_coding	KNOWN	SPINK13	3	6	-0.741054
chr5	148268307	148383783	148326045	ENSG00000247199.3	-	antisense	KNOWN	RP11-373N22.3	1	5	-0.490184
chr5	148307298	148308258	148307778	ENSG00000249834.3	+	processed_pseudogene	KNOWN	PGBD4P3	1	2	-0.312398
chr5	148312419	148315922	148314170	ENSG00000145879.10	+	protein_coding	KNOWN	SPINK7	6	4	-0.466975
chr5	148321203	148339849	148330526	ENSG00000204909.7	+	protein_coding	KNOWN	SPINK9	2	5	-0.444119
chr5	148383935	148442836	148413385	ENSG00000145868.16	+	protein_coding	KNOWN	FBXO38	20	22	-0.245886
chr5	148389748	148390029	148389888	ENSG00000274799.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.371520
chr5	148430159	148430807	148430483	ENSG00000251330.3	-	antisense	KNOWN	CTD-2283N19.1	1	2	-0.404576
chr5	148451032	148677235	148564133	ENSG00000164270.17	-	protein_coding	KNOWN	HTR4	13	8	-0.358413
chr5	148644687	148646390	148645538	ENSG00000253297.1	-	sense_intronic	KNOWN	CTB-160O22.1	1	1	-0.342411
chr5	148825245	148828687	148826966	ENSG00000169252.5	+	protein_coding	KNOWN	ADRB2	1	1	-0.159193
chr5	148923639	149063163	148993401	ENSG00000169247.11	-	protein_coding	KNOWN	SH3TC2	15	20	0.115929
chr5	148970340	148970653	148970496	ENSG00000272411.1	+	antisense	KNOWN	RP11-44B19.1	1	1	0.239549
chr5	149057554	149057656	149057605	ENSG00000251842.1	-	snRNA	KNOWN	RNU6-732P	1	1	0.251058
chr5	149062304	149062414	149062359	ENSG00000207714.2	-	miRNA	KNOWN	MIR584	1	1	0.251058
chr5	149063317	149109787	149086552	ENSG00000250072.5	+	lincRNA	KNOWN	CTC-529P8.1	6	4	0.049025
chr5	149116178	149116480	149116329	ENSG00000200161.1	-	misc_RNA	KNOWN	RN7SKP145	1	1	0.003554
chr5	149141483	149260542	149201012	ENSG00000173210.19	+	protein_coding	KNOWN	ABLIM3	12	24	0.357034
chr5	149163955	149276776	149220365	ENSG00000248647.2	-	antisense	KNOWN	RP11-331K21.1	2	3	0.376680
chr5	149216523	149276805	149246664	ENSG00000253406.1	-	antisense	KNOWN	AC012613.2	1	2	0.454194
chr5	149271871	149341802	149306836	ENSG00000157510.13	+	protein_coding	KNOWN	AFAP1L1	6	19	0.486131
chr5	149345430	149354583	149350006	ENSG00000164284.14	+	protein_coding	KNOWN	GRPEL2	4	4	0.299537
chr5	149348116	149357642	149352879	ENSG00000253618.1	-	antisense	KNOWN	GRPEL2-AS1	1	2	0.301713
chr5	149358007	149369653	149363830	ENSG00000145882.10	+	protein_coding	KNOWN	PCYOX1L	7	6	0.303139
chr5	149371324	149404202	149387763	ENSG00000127743.5	-	protein_coding	KNOWN	IL17B	3	3	0.587004
chr5	149372174	149375116	149373645	ENSG00000253865.1	+	antisense	KNOWN	RP11-394O4.3	1	2	0.546756
chr5	149406689	149428678	149417683	ENSG00000249669.7	+	lincRNA	KNOWN	MIR143HG	12	6	0.894059
chr5	149425771	149428289	149427030	ENSG00000275871.1	-	lincRNA	KNOWN	RP11-394O4.6	1	2	0.939093
chr5	149428918	149429023	149428970	ENSG00000208035.1	+	miRNA	KNOWN	MIR143	1	1	0.939093
chr5	149430286	149432834	149431560	ENSG00000269936.3	+	lincRNA	KNOWN	RP11-394O4.5	1	1	1.193437
chr5	149430646	149430733	149430689	ENSG00000276365.1	+	miRNA	KNOWN	MIR145	1	1	1.193437
chr5	149492197	149551552	149521874	ENSG00000113712.16	-	protein_coding	KNOWN	CSNK1A1	12	11	0.168445
chr5	149494314	149504670	149499492	ENSG00000230551.4	-	processed_transcript	KNOWN	CTB-89H12.4	1	2	0.197786
chr5	149545383	149545810	149545596	ENSG00000241112.1	-	processed_pseudogene	KNOWN	RPL29P14	1	1	0.115839
chr5	149551947	149634968	149593457	ENSG00000183111.11	+	protein_coding	KNOWN	ARHGEF37	3	13	0.465541
chr5	149604276	149604417	149604346	ENSG00000221135.1	-	miRNA	NOVEL	AC021078.1	1	1	0.413920
chr5	149606637	149606741	149606689	ENSG00000222213.1	-	snRNA	KNOWN	RNU6-588P	1	1	0.413920
chr5	149695748	149695959	149695853	ENSG00000221043.2	-	snoRNA	NOVEL	U3	1	1	0.246714
chr5	149722070	149722372	149722221	ENSG00000242928.3	+	misc_RNA	KNOWN	RN7SL868P	1	1	0.171960
chr5	149730298	149855022	149792660	ENSG00000155846.16	+	protein_coding	KNOWN	PPARGC1B	7	12	0.605261
chr5	149732797	149732908	149732852	ENSG00000199047.2	+	miRNA	KNOWN	MIR378A	1	1	0.563861
chr5	149857955	149944793	149901374	ENSG00000132915.10	-	protein_coding	KNOWN	PDE6A	5	22	0.340367
chr5	149932014	149932668	149932341	ENSG00000251583.1	-	processed_pseudogene	KNOWN	AC008427.2	1	1	0.289529
chr5	149940030	149940131	149940080	ENSG00000200334.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.289529
chr5	149960737	149993455	149977096	ENSG00000155850.7	+	protein_coding	KNOWN	SLC26A2	3	3	0.378975
chr5	149993118	150001167	149997142	ENSG00000164296.6	-	protein_coding	KNOWN	TIGD6	3	2	0.343864
chr5	150000046	150053142	150026594	ENSG00000113716.12	+	protein_coding	KNOWN	HMGXB3	6	21	0.580142
chr5	150014785	150015154	150014969	ENSG00000248696.1	-	processed_pseudogene	KNOWN	AC011406.2	1	1	0.651717
chr5	150021567	150021921	150021744	ENSG00000241907.1	-	processed_pseudogene	KNOWN	RPS20P4	1	1	0.651717
chr5	150053291	150113372	150083331	ENSG00000182578.13	-	protein_coding	KNOWN	CSF1R	9	22	0.801755
chr5	150094302	150095048	150094675	ENSG00000214485.6	+	processed_pseudogene	KNOWN	RPL7P1	1	1	0.601853
chr5	150098406	150098506	150098456	ENSG00000199409.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.601853
chr5	150113837	150155872	150134854	ENSG00000113721.13	-	protein_coding	KNOWN	PDGFRB	11	23	1.079288
chr5	150166795	150184558	150175676	ENSG00000113722.16	+	protein_coding	KNOWN	CDX1	2	4	0.716275
chr5	150189957	150222788	150206372	ENSG00000011083.8	+	protein_coding	KNOWN	SLC6A7	3	16	0.881476
chr5	150219491	150290291	150254891	ENSG00000070808.15	-	protein_coding	KNOWN	CAMK2A	7	19	0.749858
chr5	150250811	150250878	150250844	ENSG00000273560.1	-	miRNA	NOVEL	AC011372.1	1	1	0.833680
chr5	150296343	150339307	150317825	ENSG00000183876.8	-	protein_coding	KNOWN	ARSI	3	2	0.778291
chr5	150357639	150400308	150378973	ENSG00000070814.17	+	protein_coding	KNOWN	TCOF1	15	27	0.712110
chr5	150401637	150412929	150407283	ENSG00000019582.14	-	protein_coding	KNOWN	CD74	12	9	0.621783
chr5	150443190	150449756	150446473	ENSG00000164587.11	-	protein_coding	KNOWN	RPS14	7	5	0.536777
chr5	150475531	150485968	150480749	ENSG00000254333.1	-	lincRNA	KNOWN	CTC-367J11.1	1	3	1.007103
chr5	150485818	150558211	150522014	ENSG00000070614.14	+	protein_coding	KNOWN	NDST1	9	15	0.933138
chr5	150601080	150659220	150630150	ENSG00000171992.12	+	protein_coding	KNOWN	SYNPO	5	3	0.683962
chr5	150608428	150615354	150611891	ENSG00000253852.1	-	antisense	KNOWN	CTB-140J7.2	1	3	0.574917
chr5	150660874	150679365	150670119	ENSG00000164591.13	+	protein_coding	KNOWN	MYOZ3	9	7	0.575823
chr5	150670658	150672390	150671524	ENSG00000250309.2	-	antisense	KNOWN	CTC-345K18.2	1	2	0.416831
chr5	150690794	150701107	150695950	ENSG00000086589.11	-	protein_coding	KNOWN	RBM22	8	11	0.241002
chr5	150708440	150759109	150733774	ENSG00000132912.12	-	protein_coding	KNOWN	DCTN4	15	15	0.161812
chr5	150777946	150796734	150787340	ENSG00000256235.1	+	protein_coding	KNOWN	SMIM3	1	2	0.322416
chr5	150846523	150900736	150873629	ENSG00000237693.4	+	protein_coding	KNOWN	IRGM	3	4	0.041996
chr5	150894392	150904983	150899687	ENSG00000145908.12	-	protein_coding	KNOWN	ZNF300	5	7	-0.428482
chr5	150930645	150946289	150938467	ENSG00000197083.11	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF300P1	2	5	-0.165396
chr5	150950109	150952460	150951284	ENSG00000274235.1	-	unprocessed_pseudogene	KNOWN	CTC-311G1.1	1	3	-0.065888
chr5	150978419	150979175	150978797	ENSG00000277866.1	+	unprocessed_pseudogene	KNOWN	CTC-311G1.2	1	1	-0.270578
chr5	151016918	151017411	151017164	ENSG00000279109.1	-	protein_coding	KNOWN	AC008641.1	1	3	0.309897
chr5	151020438	151028993	151024715	ENSG00000211445.11	+	protein_coding	KNOWN	GPX3	11	6	0.309897
chr5	151029945	151093577	151061761	ENSG00000145901.14	-	protein_coding	KNOWN	TNIP1	21	18	0.636324
chr5	151100712	151157882	151129297	ENSG00000197043.13	-	protein_coding	KNOWN	ANXA6	15	26	0.616536
chr5	151158106	151158462	151158284	ENSG00000254298.1	-	lincRNA	KNOWN	CTB-17P3.4	1	2	0.653367
chr5	151181052	151224145	151202598	ENSG00000198624.12	-	protein_coding	KNOWN	CCDC69	8	9	0.235189
chr5	151212150	151270440	151241295	ENSG00000196743.8	+	protein_coding	KNOWN	GM2A	3	4	0.365819
chr5	151276762	151303766	151290264	ENSG00000186334.9	-	protein_coding	KNOWN	SLC36A3	3	11	-0.032299
chr5	151314978	151347590	151331284	ENSG00000186335.8	-	protein_coding	KNOWN	SLC36A2	6	10	0.065366
chr5	151319422	151319776	151319599	ENSG00000270904.1	+	processed_pseudogene	KNOWN	CTC-224D3.1	1	1	0.177299
chr5	151366433	151431352	151398892	ENSG00000253897.1	-	unprocessed_pseudogene	KNOWN	CTB-23I7.1	1	9	-0.041385
chr5	151368444	151368515	151368479	ENSG00000252270.1	-	miRNA	NOVEL	AC034205.1	1	1	0.009956
chr5	151378003	151378640	151378321	ENSG00000253472.1	-	processed_pseudogene	KNOWN	CTB-23I7.2	1	1	0.125939
chr5	151380341	151382381	151381361	ENSG00000271494.1	+	processed_pseudogene	KNOWN	CTB-23I7.3	1	2	0.125939
chr5	151437046	151492381	151464713	ENSG00000123643.12	+	protein_coding	KNOWN	SLC36A1	11	12	0.175688
chr5	151477459	151477577	151477518	ENSG00000200227.1	-	rRNA	KNOWN	RNA5SP197	1	1	0.309583
chr5	151504093	151568944	151536518	ENSG00000086570.12	-	protein_coding	KNOWN	FAT2	2	23	0.165172
chr5	151509453	151512769	151511111	ENSG00000271795.1	+	antisense	KNOWN	CTC-251D13.1	1	1	0.392573
chr5	151522087	151522148	151522117	ENSG00000276622.1	-	miRNA	KNOWN	MIR6499	1	1	0.488293
chr5	151652275	151655449	151653862	ENSG00000260581.1	+	antisense	KNOWN	CTB-113P19.4	1	2	0.301445
chr5	151661096	151687165	151674130	ENSG00000113140.10	-	protein_coding	KNOWN	SPARC	9	10	0.625178
chr5	151676945	151724782	151700863	ENSG00000249035.6	+	antisense	KNOWN	CTB-113P19.1	2	5	0.601530
chr5	151704289	151704578	151704433	ENSG00000222102.1	-	misc_RNA	KNOWN	RN7SKP232	1	1	0.697062
chr5	151724831	151725356	151725093	ENSG00000272112.1	-	lincRNA	KNOWN	CTB-113P19.5	1	1	0.303139
chr5	151742316	151772532	151757424	ENSG00000177556.11	-	protein_coding	KNOWN	ATOX1	7	5	0.455950
chr5	151753992	151767247	151760619	ENSG00000253921.1	+	antisense	KNOWN	CTB-113P19.3	1	3	0.511217
chr5	151765859	151766378	151766118	ENSG00000213433.5	-	transcribed_processed_pseudogene	KNOWN	RPLP1P6	2	1	0.511217
chr5	151770242	151771508	151770875	ENSG00000275765.5	-	lincRNA	KNOWN	RP11-54C4.3	1	2	0.304295
chr5	151771045	151812785	151791915	ENSG00000145907.14	+	protein_coding	KNOWN	G3BP1	14	12	0.186839
chr5	151822513	151924842	151873677	ENSG00000145888.10	-	protein_coding	KNOWN	GLRA1	4	9	-0.108677
chr5	151848886	151850791	151849838	ENSG00000270978.1	+	processed_pseudogene	KNOWN	RP11-54C4.2	1	2	-0.076898
chr5	151875566	151875692	151875629	ENSG00000222308.1	-	rRNA	KNOWN	RNA5SP198	1	1	-0.251963
chr5	151949571	152270448	152110009	ENSG00000254226.5	+	lincRNA	KNOWN	CTB-12O2.1	4	7	-0.318047
chr5	152391532	152433368	152412450	ENSG00000132911.4	-	protein_coding	KNOWN	NMUR2	2	4	-0.444505
chr5	152495718	152496017	152495867	ENSG00000242080.1	-	processed_pseudogene	KNOWN	CTC-550M4.1	1	1	-0.472272
chr5	152618965	153223543	152921254	ENSG00000249484.8	-	lincRNA	KNOWN	LINC01470	5	6	-0.395156
chr5	153489615	153813869	153651742	ENSG00000155511.17	+	protein_coding	KNOWN	GRIA1	13	16	0.067222
chr5	153568290	153568412	153568351	ENSG00000280480.1	-	miRNA	NOVEL	AC025156.1	1	1	0.151801
chr5	153755382	153755680	153755531	ENSG00000242976.3	+	misc_RNA	KNOWN	RN7SL177P	1	1	-0.125426
chr5	153887428	153898987	153893207	ENSG00000251183.1	-	lincRNA	KNOWN	AC091962.3	1	4	0.035829
chr5	153901459	153903223	153902341	ENSG00000261382.1	+	lincRNA	KNOWN	RP11-461L18.1	1	1	0.068659
chr5	153990128	154038936	154014532	ENSG00000055147.17	-	protein_coding	KNOWN	FAM114A2	18	15	-0.172662
chr5	154038906	154220478	154129692	ENSG00000037749.11	+	protein_coding	KNOWN	MFAP3	12	5	0.011144
chr5	154093304	154093379	154093341	ENSG00000251710.1	-	miRNA	NOVEL	AC010295.1	1	1	-0.021071
chr5	154190730	154420984	154305857	ENSG00000164574.15	+	protein_coding	KNOWN	GALNT10	10	14	0.279318
chr5	154329437	154445850	154387643	ENSG00000245275.7	-	antisense	KNOWN	SAP30L-AS1	4	4	0.277841
chr5	154337471	154338452	154337961	ENSG00000253119.1	-	processed_pseudogene	KNOWN	HNRNPA3P7	1	1	0.038694
chr5	154340032	154340126	154340079	ENSG00000221070.1	-	miRNA	NOVEL	AC008625.1	1	1	0.038694
chr5	154347106	154347247	154347176	ENSG00000221430.1	+	miRNA	KNOWN	MIR1294	1	1	0.038694
chr5	154349428	154349725	154349576	ENSG00000241963.3	+	misc_RNA	KNOWN	RN7SL655P	1	1	0.038694
chr5	154445957	154461054	154453505	ENSG00000164576.11	+	protein_coding	KNOWN	SAP30L	9	5	0.495257
chr5	154474972	154478264	154476618	ENSG00000113196.2	-	protein_coding	KNOWN	HAND1	1	2	0.427595
chr5	154483917	154486150	154485033	ENSG00000254293.1	-	lincRNA	KNOWN	CTB-158E9.1	2	2	0.427595
chr5	154493576	154494743	154494159	ENSG00000253886.1	+	processed_pseudogene	KNOWN	CTB-158E9.2	1	1	0.363796
chr5	154559308	154560440	154559874	ENSG00000253146.1	-	processed_pseudogene	KNOWN	CIR1P1	1	1	-0.084165
chr5	154596012	154596072	154596042	ENSG00000264760.1	-	miRNA	KNOWN	MIR3141	1	1	0.464363
chr5	154685776	154685861	154685818	ENSG00000221552.1	+	miRNA	KNOWN	MIR1303	1	1	0.179899
chr5	154705626	154705727	154705676	ENSG00000274472.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.308803
chr5	154712902	154817607	154765254	ENSG00000155506.16	+	protein_coding	KNOWN	LARP1	15	19	0.519440
chr5	154718383	154718689	154718536	ENSG00000272197.2	-	misc_RNA	KNOWN	RN7SL803P	1	1	0.383041
chr5	154729231	154729694	154729462	ENSG00000241187.1	+	processed_pseudogene	KNOWN	CTC-209L16.1	1	1	0.383041
chr5	154818491	154859252	154838871	ENSG00000170271.10	-	protein_coding	KNOWN	FAXDC2	16	9	0.563615
chr5	154821943	154822258	154822100	ENSG00000277039.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.577419
chr5	154829458	154829540	154829499	ENSG00000263361.1	+	miRNA	KNOWN	MIR378H	1	1	0.577419
chr5	154857553	154876793	154867173	ENSG00000155508.13	+	protein_coding	KNOWN	CNOT8	25	8	0.277770
chr5	154887416	154938209	154912812	ENSG00000082516.8	-	protein_coding	KNOWN	GEMIN5	3	28	0.308202
chr5	154941070	154969411	154955240	ENSG00000082515.16	+	protein_coding	KNOWN	MRPL22	8	8	-0.064416
chr5	154993598	154994445	154994021	ENSG00000253261.1	+	processed_pseudogene	KNOWN	CTC-280C13.1	1	2	0.008091
chr5	155013755	155018132	155015943	ENSG00000226650.5	+	protein_coding	KNOWN	KIF4B	1	1	-0.025502
chr5	155024714	155024800	155024757	ENSG00000221131.2	-	miRNA	NOVEL	AC008410.1	1	1	-0.025502
chr5	155111184	155112324	155111754	ENSG00000253646.1	-	processed_pseudogene	KNOWN	CTD-2311A18.1	1	2	-0.584713
chr5	155397291	155398353	155397822	ENSG00000271477.1	+	processed_pseudogene	KNOWN	CTC-447K7.1	1	2	-0.286520
chr5	155491336	155493598	155492467	ENSG00000270442.1	+	processed_pseudogene	KNOWN	CTB-95D12.1	1	1	-0.734360
chr5	155845437	155845528	155845482	ENSG00000200275.1	+	rRNA	KNOWN	RNA5SP199	1	1	-0.509181
chr5	155845469	155845527	155845498	ENSG00000280546.1	+	miRNA	NOVEL	AC140677.1	1	1	-0.509181
chr5	155870344	156767788	156319066	ENSG00000170624.13	+	protein_coding	KNOWN	SGCD	4	10	-0.368165
chr5	156458398	156458507	156458452	ENSG00000253370.2	-	unprocessed_pseudogene	KNOWN	CTB-56J15.1	1	1	-0.303937
chr5	156658587	156660435	156659511	ENSG00000279646.1	-	protein_coding	KNOWN	AC016577.1	1	2	-0.313523
chr5	156704058	156739812	156721935	ENSG00000254163.1	-	antisense	KNOWN	CTC-340I23.2	1	3	-0.217233
chr5	156814130	156814234	156814182	ENSG00000199468.1	+	snRNA	KNOWN	RNU6-556P	1	1	-0.340533
chr5	156850563	156851174	156850868	ENSG00000231989.3	+	processed_pseudogene	KNOWN	PPP1R2P3	1	1	-0.365357
chr5	156919282	156963255	156941268	ENSG00000145850.8	-	protein_coding	KNOWN	TIMD4	3	9	-0.201482
chr5	156924119	156924710	156924414	ENSG00000270560.1	+	processed_pseudogene	KNOWN	APOOP1	1	1	-0.216130
chr5	157029413	157059119	157044266	ENSG00000113249.12	-	protein_coding	KNOWN	HAVCR1	6	9	-0.261553
chr5	157085832	157142869	157114350	ENSG00000135077.8	-	protein_coding	KNOWN	HAVCR2	6	7	-0.266250
chr5	157104788	157114900	157109844	ENSG00000254246.1	+	antisense	KNOWN	CTB-120L21.1	1	2	-0.277710
chr5	157137412	157159019	157148215	ENSG00000155868.7	-	protein_coding	KNOWN	MED7	3	3	-0.084584
chr5	157142933	157255191	157199062	ENSG00000113263.12	+	protein_coding	KNOWN	ITK	10	17	-0.086962
chr5	157161846	157166264	157164055	ENSG00000170613.4	-	protein_coding	KNOWN	FAM71B	1	2	0.152292
chr5	157199242	157224380	157211811	ENSG00000253980.1	-	antisense	KNOWN	CTB-4E7.1	1	2	-0.203522
chr5	157235185	157235299	157235242	ENSG00000222086.1	-	miRNA	NOVEL	AC010609.1	1	1	-0.315512
chr5	157260122	157266625	157263373	ENSG00000253653.1	-	antisense	KNOWN	CTC-248O19.1	1	3	0.075597
chr5	157266079	157395595	157330837	ENSG00000055163.18	+	protein_coding	KNOWN	CYFIP2	25	32	0.153211
chr5	157341600	157345721	157343660	ENSG00000172568.4	-	protein_coding	KNOWN	FNDC9	2	2	0.519629
chr5	157362615	157460078	157411346	ENSG00000251405.2	-	sense_overlapping	KNOWN	CTB-109A12.1	2	3	0.083414
chr5	157375741	157384950	157380345	ENSG00000248544.2	-	antisense	KNOWN	CTB-47B11.3	2	3	0.348332
chr5	157395534	157575775	157485654	ENSG00000135074.15	-	protein_coding	KNOWN	ADAM19	5	23	0.212202
chr5	157422439	157422873	157422656	ENSG00000253155.1	+	processed_pseudogene	KNOWN	CTB-47B11.1	1	1	-0.157368
chr5	157460019	157474717	157467368	ENSG00000172548.14	+	protein_coding	KNOWN	NIPAL4	5	7	0.143210
chr5	157565964	157569098	157567531	ENSG00000253519.1	+	antisense	KNOWN	AC106801.1	1	2	0.112651
chr5	157579497	157579599	157579548	ENSG00000252068.1	+	snRNA	KNOWN	RNU6-390P	1	1	0.350968
chr5	157604707	157605637	157605172	ENSG00000254336.1	-	processed_pseudogene	KNOWN	AC008694.2	1	2	0.216082
chr5	157625679	157671480	157648579	ENSG00000039600.10	-	protein_coding	KNOWN	SOX30	3	6	-0.069399
chr5	157671553	157680143	157675848	ENSG00000187658.6	+	protein_coding	KNOWN	C5orf52	1	3	0.147033
chr5	157682985	157690266	157686625	ENSG00000253798.1	-	antisense	KNOWN	AC008694.3	1	2	0.147947
chr5	157731197	157741448	157736322	ENSG00000113272.13	+	protein_coding	KNOWN	THG1L	3	6	0.107422
chr5	157743695	157760709	157752202	ENSG00000155858.5	+	protein_coding	KNOWN	LSM11	1	4	0.113233
chr5	157747504	157747707	157747605	ENSG00000253630.1	-	unprocessed_pseudogene	KNOWN	CTC-370J7.1	1	1	0.107422
chr5	157785743	157859175	157822459	ENSG00000113282.13	-	protein_coding	KNOWN	CLINT1	10	12	-0.071002
chr5	157809098	157809204	157809151	ENSG00000206819.1	+	snRNA	KNOWN	RNU6-260P	1	1	-0.305768
chr5	157931258	157931563	157931410	ENSG00000244331.1	-	processed_pseudogene	KNOWN	CTB-47B8.1	1	1	0.259102
chr5	157976766	157976956	157976861	ENSG00000222626.1	-	snRNA	KNOWN	RNU2-48P	1	1	-0.045512
chr5	157984658	157989990	157987324	ENSG00000253743.1	-	unprocessed_pseudogene	KNOWN	MARK2P11	1	5	-0.045512
chr5	157986146	157987706	157986926	ENSG00000213414.3	-	processed_pseudogene	KNOWN	CTB-47B8.5	1	1	-0.045512
chr5	158078099	158078764	158078431	ENSG00000253422.1	-	processed_pseudogene	KNOWN	CTB-47B8.4	1	1	-0.049736
chr5	158173601	158176422	158175011	ENSG00000253792.1	-	lincRNA	KNOWN	CTC-436K13.5	1	2	-0.004471
chr5	158175396	158200016	158187706	ENSG00000253673.1	+	lincRNA	KNOWN	CTC-436K13.1	1	2	-0.007420
chr5	158188977	158189911	158189444	ENSG00000254047.2	-	processed_pseudogene	KNOWN	CTC-436K13.4	1	1	-0.004471
chr5	158225352	158234376	158229864	ENSG00000253449.1	-	lincRNA	KNOWN	CTC-436K13.6	1	5	-0.378933
chr5	158256137	158258436	158257286	ENSG00000253424.1	+	lincRNA	KNOWN	CTC-436K13.3	1	2	0.024429
chr5	158275711	158278813	158277262	ENSG00000253134.1	+	lincRNA	KNOWN	CTC-436K13.2	1	2	-0.492971
chr5	158320683	158409773	158365228	ENSG00000276778.1	-	lincRNA	KNOWN	RP11-524N5.1	1	7	-0.297591
chr5	158424585	158452758	158438671	ENSG00000254350.1	+	lincRNA	KNOWN	RP11-542A14.1	1	2	-0.297881
chr5	158464465	158464678	158464571	ENSG00000272085.1	+	lincRNA	KNOWN	RP11-542A14.2	1	1	-0.101733
chr5	158485190	158534438	158509814	ENSG00000254135.1	+	lincRNA	KNOWN	RP11-32D16.1	2	3	-0.302899
chr5	158550836	158550930	158550883	ENSG00000281605.1	-	miRNA	NOVEL	AC091939.1	1	1	-0.551864
chr5	158695916	159099761	158897838	ENSG00000164330.16	-	protein_coding	KNOWN	EBF1	11	17	-0.303814
chr5	158983006	158984789	158983897	ENSG00000253811.1	+	antisense	KNOWN	CTD-2363C16.1	1	3	-0.056107
chr5	158985806	158987199	158986502	ENSG00000253456.1	+	antisense	KNOWN	CTD-2363C16.2	1	3	-0.056107
chr5	159100483	159117478	159108980	ENSG00000245812.2	+	lincRNA	KNOWN	RP11-175K6.1	3	3	-0.323716
chr5	159106380	159108617	159107498	ENSG00000279204.1	+	TEC	KNOWN	RP11-175K6.2	1	1	-0.476576
chr5	159157409	159210053	159183731	ENSG00000145860.11	-	protein_coding	KNOWN	RNF145	12	12	-0.091147
chr5	159209921	159248796	159229358	ENSG00000253256.1	+	antisense	KNOWN	CTB-11I22.1	1	3	-0.070222
chr5	159227715	159245127	159236421	ENSG00000253315.1	+	lincRNA	KNOWN	CTB-11I22.2	1	3	-0.109911
chr5	159230194	159230322	159230258	ENSG00000252458.1	+	snoRNA	NOVEL	SNORA68	1	1	-0.123276
chr5	159259744	159259828	159259786	ENSG00000280648.1	-	miRNA	NOVEL	AC011376.1	1	1	-0.208762
chr5	159263081	159286040	159274560	ENSG00000164332.7	+	protein_coding	KNOWN	UBLCP1	3	11	-0.095862
chr5	159310933	159451999	159381466	ENSG00000249738.7	+	lincRNA	KNOWN	AC008697.1	3	8	-0.014244
chr5	159314783	159330887	159322835	ENSG00000113302.4	-	protein_coding	KNOWN	IL12B	1	8	-0.060906
chr5	159318042	159318167	159318104	ENSG00000221601.1	+	snRNA	KNOWN	RNU4ATAC2P	1	1	-0.070280
chr5	159448556	159466276	159457416	ENSG00000253298.1	-	lincRNA	KNOWN	AC008703.1	1	7	0.157413
chr5	159525938	159526010	159525974	ENSG00000266432.1	+	miRNA	NOVEL	AC008703.2	1	1	0.363064
chr5	159748233	159761061	159754647	ENSG00000254199.1	-	lincRNA	KNOWN	AC008691.1	1	4	-0.154097
chr5	159776772	159871384	159824078	ENSG00000253311.1	-	lincRNA	KNOWN	AC011343.1	1	3	0.177271
chr5	159916783	159972544	159944663	ENSG00000170214.3	+	protein_coding	KNOWN	ADRA1B	1	2	0.222603
chr5	159950493	159951498	159950995	ENSG00000248626.1	-	processed_pseudogene	KNOWN	GAPDHP40	1	1	0.307005
chr5	160008445	160008546	160008495	ENSG00000199398.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.395668
chr5	160009113	160065543	160037328	ENSG00000113312.10	+	protein_coding	KNOWN	TTC1	5	8	0.114353
chr5	160023740	160024045	160023892	ENSG00000223908.5	-	processed_pseudogene	KNOWN	AC068657.2	1	1	0.234950
chr5	160061801	160119423	160090612	ENSG00000170234.12	-	protein_coding	KNOWN	PWWP2A	6	6	0.250481
chr5	160072268	160072364	160072316	ENSG00000280834.1	+	snRNA	NOVEL	U6	1	1	0.721880
chr5	160187367	160238735	160213051	ENSG00000170231.15	+	protein_coding	KNOWN	FABP6	4	7	0.217255
chr5	160195744	160204826	160200285	ENSG00000247699.2	-	antisense	KNOWN	CTB-127C13.1	2	2	0.225743
chr5	160247517	160248217	160247867	ENSG00000253772.1	+	processed_pseudogene	KNOWN	RP11-34P1.1	1	1	0.379794
chr5	160251652	160345396	160298524	ENSG00000135083.14	-	protein_coding	KNOWN	CCNJL	8	8	0.170784
chr5	160258253	160258585	160258419	ENSG00000254373.1	+	processed_pseudogene	KNOWN	RP11-34P1.2	1	1	0.091992
chr5	160326693	160326969	160326831	ENSG00000270612.1	+	processed_pseudogene	KNOWN	RP11-34P1.4	1	1	0.009530
chr5	160347751	160370641	160359196	ENSG00000145861.7	-	protein_coding	KNOWN	C1QTNF2	1	3	0.309275
chr5	160393148	160400097	160396622	ENSG00000221886.3	-	protein_coding	KNOWN	ZBED8	2	3	-0.308546
chr5	160401641	160421711	160411676	ENSG00000164609.9	-	protein_coding	KNOWN	SLU7	9	16	-0.095470
chr5	160421822	160428744	160425283	ENSG00000164611.12	+	protein_coding	KNOWN	PTTG1	7	6	0.056586
chr5	160468268	160487426	160477847	ENSG00000253522.3	+	lincRNA	KNOWN	MIR3142HG	1	2	0.126673
chr5	160474402	160474483	160474442	ENSG00000265237.1	+	miRNA	KNOWN	MIR3142	1	1	0.141179
chr5	160485352	160485450	160485401	ENSG00000277727.1	+	miRNA	KNOWN	MIR146A	1	1	0.141179
chr5	160563120	160852214	160707667	ENSG00000118322.12	-	protein_coding	KNOWN	ATP10B	11	26	-0.216477
chr5	160613873	160639183	160626528	ENSG00000253687.1	+	antisense	KNOWN	CTC-348L5.1	1	2	-0.241008
chr5	160664587	160664681	160664634	ENSG00000239192.1	+	miRNA	NOVEL	AC011363.1	1	1	-0.382788
chr5	160685351	160692889	160689120	ENSG00000254391.1	+	antisense	KNOWN	CTC-529G1.1	1	4	-0.431708
chr5	160931778	160938626	160935202	ENSG00000253417.5	-	lincRNA	KNOWN	RP11-109J4.1	2	3	0.114131
chr5	161230050	161230147	161230098	ENSG00000221002.1	-	miRNA	NOVEL	AC022120.1	1	1	-0.560085
chr5	161288429	161549044	161418736	ENSG00000145864.12	-	protein_coding	KNOWN	GABRB2	9	11	-0.483170
chr5	161547063	161702593	161624828	ENSG00000145863.10	+	protein_coding	KNOWN	GABRA6	9	9	-0.448354
chr5	161687347	161689408	161688377	ENSG00000253403.1	-	antisense	KNOWN	RP11-348M17.2	1	2	-0.492971
chr5	161751448	161751768	161751608	ENSG00000118990.5	-	processed_pseudogene	KNOWN	GLRXP3	1	1	-0.033539
chr5	161847191	161899981	161873586	ENSG00000022355.15	+	protein_coding	KNOWN	GABRA1	10	11	-0.591400
chr5	161910252	162001196	161955724	ENSG00000280776.1	-	lincRNA	KNOWN	LINC01202	1	3	-0.770428
chr5	162067540	162155536	162111538	ENSG00000113327.14	+	protein_coding	KNOWN	GABRG2	6	11	-0.537685
chr5	162424378	162427345	162425861	ENSG00000254173.1	-	lincRNA	KNOWN	RP11-96G10.1	1	2	-0.693609
chr5	162477891	162477993	162477942	ENSG00000201474.1	+	snRNA	KNOWN	RNU6-164P	1	1	-0.401656
chr5	162558685	162623461	162591073	ENSG00000254186.1	-	lincRNA	KNOWN	RP11-167P20.1	1	4	-0.492556
chr5	162761833	162762313	162762073	ENSG00000254351.1	+	processed_pseudogene	KNOWN	ARL2BPP5	1	1	-0.213944
chr5	163012265	163437326	163224795	ENSG00000250061.5	-	antisense	KNOWN	RP11-541P9.3	4	5	-0.424571
chr5	163039291	163039599	163039445	ENSG00000249449.1	+	processed_pseudogene	KNOWN	MRPL57P6	1	1	-0.581409
chr5	163416525	163416731	163416628	ENSG00000250114.1	+	unprocessed_pseudogene	KNOWN	CTB-95B16.1	1	1	-0.125239
chr5	163437569	163446151	163441860	ENSG00000113328.18	+	protein_coding	KNOWN	CCNG1	13	8	-0.236631
chr5	163446526	163460140	163453333	ENSG00000170584.10	-	protein_coding	KNOWN	NUDCD2	4	4	-0.130061
chr5	163460203	163491945	163476074	ENSG00000072571.19	+	protein_coding	KNOWN	HMMR	8	18	-0.286554
chr5	163483065	163494058	163488561	ENSG00000251018.2	-	antisense	KNOWN	HMMR-AS1	2	4	-0.349351
chr5	163503114	163519336	163511225	ENSG00000038274.16	+	protein_coding	KNOWN	MAT2B	8	7	-0.111676
chr5	163709210	163709514	163709362	ENSG00000224012.3	-	processed_pseudogene	KNOWN	RP11-756G12.1	1	1	-0.239522
chr5	163796065	163796165	163796115	ENSG00000251998.1	-	snRNA	KNOWN	RNU6-168P	1	1	-0.325566
chr5	163855140	163856642	163855891	ENSG00000273569.1	-	processed_pseudogene	KNOWN	CTC-320C6.1	1	2	-0.584601
chr5	163887506	163887827	163887666	ENSG00000271679.1	-	processed_pseudogene	KNOWN	LSM1P2	1	1	-0.250240
chr5	164119098	164234097	164176597	ENSG00000253331.1	-	lincRNA	KNOWN	CTC-207P7.1	1	5	-0.471953
chr5	164209631	164211892	164210761	ENSG00000253538.1	+	lincRNA	KNOWN	CTB-32P11.1	1	2	-0.683431
chr5	164296696	165171643	164734169	ENSG00000241956.9	+	antisense	KNOWN	CTC-340A15.2	16	6	-0.510485
chr5	164448422	164467402	164457912	ENSG00000253236.1	-	lincRNA	KNOWN	CTD-2313P7.1	1	4	-0.766027
chr5	164601002	164601452	164601227	ENSG00000253600.1	-	processed_pseudogene	KNOWN	CTC-340A15.1	1	1	-0.561358
chr5	164935162	164935268	164935215	ENSG00000206845.1	-	snRNA	KNOWN	RNU6-209P	1	1	-0.341905
chr5	165220577	165241752	165231164	ENSG00000254066.1	-	lincRNA	KNOWN	CTB-181F24.1	2	3	-0.639881
chr5	165349030	165778689	165563859	ENSG00000253693.1	+	lincRNA	KNOWN	CTC-535M15.2	1	2	-0.506272
chr5	165609441	165609679	165609560	ENSG00000252794.1	+	misc_RNA	KNOWN	RN7SKP60	1	1	-0.619211
chr5	165754516	165754651	165754583	ENSG00000281695.1	-	miRNA	NOVEL	AC008562.1	1	1	-0.474355
chr5	165782805	165783134	165782969	ENSG00000253512.1	-	processed_pseudogene	KNOWN	CTC-535M15.1	1	1	-0.620726
chr5	165905126	165905608	165905367	ENSG00000253946.1	+	processed_pseudogene	KNOWN	CTC-425K20.1	1	1	-0.352310
chr5	166028567	166029311	166028939	ENSG00000254252.1	-	processed_pseudogene	KNOWN	RPL7P20	1	1	-0.596922
chr5	166128498	166155439	166141968	ENSG00000254171.1	+	lincRNA	KNOWN	RP11-67M9.1	1	3	-0.321400
chr5	166379124	166379209	166379166	ENSG00000277612.1	-	miRNA	NOVEL	AC026403.1	1	1	-0.549873
chr5	166382305	166382599	166382452	ENSG00000229119.3	+	processed_pseudogene	KNOWN	CTB-63M22.1	1	1	-0.549873
chr5	166905222	166926370	166915796	ENSG00000254130.1	-	lincRNA	KNOWN	CTB-7E3.1	1	3	-0.466651
chr5	167116318	167119585	167117951	ENSG00000253713.1	-	lincRNA	KNOWN	CTC-264O10.2	1	2	-0.617229
chr5	167164934	167168401	167166667	ENSG00000253469.1	-	lincRNA	KNOWN	CTC-264O10.1	1	2	-0.427382
chr5	167284799	168264157	167774478	ENSG00000145934.15	+	protein_coding	KNOWN	TENM2	11	29	-0.186292
chr5	167287320	167294273	167290796	ENSG00000254365.1	-	antisense	KNOWN	CTB-180C19.1	1	2	-0.444926
chr5	167296234	167303372	167299803	ENSG00000254297.1	-	antisense	KNOWN	CTC-286N12.1	1	3	-0.200616
chr5	167306273	167309870	167308071	ENSG00000253527.1	-	antisense	KNOWN	CTB-105L4.2	1	3	-0.200616
chr5	167653228	167660481	167656854	ENSG00000254187.1	-	antisense	KNOWN	CTB-78F1.1	1	2	-0.040112
chr5	167721363	167729124	167725243	ENSG00000253357.1	+	sense_intronic	KNOWN	CTB-78F1.2	1	2	0.013136
chr5	167870545	167870665	167870605	ENSG00000221741.1	-	miRNA	NOVEL	AC093304.1	1	1	-0.084259
chr5	167914585	167914721	167914653	ENSG00000281515.1	-	miRNA	NOVEL	AC008464.1	1	1	-0.063127
chr5	167937717	167953469	167945593	ENSG00000253660.1	-	antisense	KNOWN	CTC-353G13.1	1	4	-0.098164
chr5	167965187	167967086	167966136	ENSG00000253947.1	-	antisense	KNOWN	CTB-77H17.1	1	2	0.011618
chr5	168033091	168033205	168033148	ENSG00000253065.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.095432
chr5	168085329	168187719	168136524	ENSG00000253925.1	-	antisense	KNOWN	CTB-178M22.1	1	6	0.082047
chr5	168128856	168130422	168129639	ENSG00000279739.1	+	TEC	KNOWN	CTB-105N12.2	1	1	0.127221
chr5	168229583	168232357	168230970	ENSG00000253978.1	-	antisense	KNOWN	CTB-178M22.2	1	3	0.036607
chr5	168291651	168472303	168381977	ENSG00000113645.13	+	protein_coding	KNOWN	WWC1	17	23	0.255531
chr5	168486445	168519299	168502872	ENSG00000113643.8	+	protein_coding	KNOWN	RARS	10	15	0.179284
chr5	168529116	168530634	168529875	ENSG00000188573.7	+	protein_coding	KNOWN	FBLL1	1	1	0.143750
chr5	168548495	168579600	168564047	ENSG00000120137.6	-	protein_coding	KNOWN	PANK3	3	7	-0.081803
chr5	168552277	168553727	168553002	ENSG00000253861.1	-	processed_pseudogene	KNOWN	SLC2A3P1	1	1	-0.072395
chr5	168560892	168560977	168560934	ENSG00000199035.1	-	miRNA	KNOWN	MIR103A1	1	1	-0.072395
chr5	168616352	168616996	168616674	ENSG00000233913.7	+	processed_pseudogene	KNOWN	CTC-575D19.1	1	1	0.163942
chr5	168654513	168667761	168661137	ENSG00000254192.1	+	antisense	KNOWN	CTC-558O2.2	1	3	0.204886
chr5	168661733	169301129	168981431	ENSG00000184347.14	-	protein_coding	KNOWN	SLIT3	8	36	0.203413
chr5	168706567	168720884	168713725	ENSG00000254042.1	+	antisense	KNOWN	CTC-558O2.1	2	6	0.193511
chr5	168768146	168768255	168768200	ENSG00000207739.1	-	miRNA	KNOWN	MIR218-2	1	1	0.334126
chr5	168791498	168791610	168791554	ENSG00000202345.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.469297
chr5	168993000	168995677	168994338	ENSG00000248965.1	+	antisense	KNOWN	CTB-174D11.2	1	3	0.084832
chr5	169012148	169013146	169012647	ENSG00000279752.1	-	TEC	KNOWN	CTB-174D11.3	1	1	0.113156
chr5	169013227	169037998	169025612	ENSG00000248222.5	+	antisense	KNOWN	CTB-174D11.1	10	5	0.145635
chr5	169263601	169263694	169263647	ENSG00000207619.1	-	miRNA	KNOWN	MIR585	1	1	0.397700
chr5	169552449	169552555	169552502	ENSG00000206614.1	+	snRNA	KNOWN	RNU6-477P	1	1	0.006824
chr5	169583634	169604778	169594206	ENSG00000040275.16	+	protein_coding	KNOWN	SPDL1	16	12	-0.354547
chr5	169637247	170083382	169860314	ENSG00000134516.15	+	protein_coding	KNOWN	DOCK2	17	53	0.063802
chr5	169772966	169779365	169776165	ENSG00000253269.1	-	antisense	KNOWN	CTB-37A13.1	1	2	-0.017831
chr5	169864264	169980740	169922502	ENSG00000204767.3	-	protein_coding	KNOWN	FAM196B	2	4	0.136724
chr5	169923460	169923514	169923487	ENSG00000216020.2	-	miRNA	NOVEL	AC008449.1	1	1	0.122365
chr5	170028488	170028566	170028527	ENSG00000263831.1	+	miRNA	KNOWN	MIR378E	1	1	-0.124432
chr5	170105897	170109725	170107811	ENSG00000168269.8	+	protein_coding	KNOWN	FOXI1	2	2	-0.070439
chr5	170140664	170141940	170141302	ENSG00000253219.1	-	processed_pseudogene	KNOWN	KRT18P41	1	1	-0.352572
chr5	170191579	170199141	170195360	ENSG00000249601.2	-	lincRNA	KNOWN	LINC01187	2	4	-0.062229
chr5	170232447	170252575	170242511	ENSG00000234511.8	+	processed_transcript	KNOWN	C5orf58	6	4	-0.056937
chr5	170246237	170298227	170272232	ENSG00000043462.11	-	protein_coding	KNOWN	LCP2	10	21	-0.240665
chr5	170308701	170312716	170310708	ENSG00000250274.1	-	lincRNA	KNOWN	CTB-114C7.4	1	2	-0.093006
chr5	170331429	170333879	170332654	ENSG00000235172.7	+	lincRNA	KNOWN	LINC01366	3	3	-0.161765
chr5	170353487	170736632	170545059	ENSG00000182132.12	+	protein_coding	KNOWN	KCNIP1	9	9	-0.091000
chr5	170374671	170389677	170382174	ENSG00000145936.8	-	protein_coding	KNOWN	KCNMB1	2	4	-0.004471
chr5	170389493	170422844	170406168	ENSG00000253647.1	+	antisense	KNOWN	CTD-2270F17.1	1	3	-0.165544
chr5	170483806	170486407	170485106	ENSG00000253858.1	-	antisense	KNOWN	CTB-147C13.1	1	2	-0.293792
chr5	170639158	170681437	170660297	ENSG00000253591.1	-	antisense	KNOWN	CTC-265N9.1	1	6	-0.153957
chr5	170747047	170788650	170767848	ENSG00000253348.1	-	antisense	KNOWN	CTC-455F18.1	3	3	0.015316
chr5	170763350	170814047	170788698	ENSG00000094755.16	+	protein_coding	KNOWN	GABRP	10	11	0.035024
chr5	170767384	170767451	170767417	ENSG00000276554.1	+	miRNA	NOVEL	AC008514.1	1	1	0.278143
chr5	170861870	171300015	171080942	ENSG00000204764.12	+	protein_coding	KNOWN	RANBP17	23	30	-0.299193
chr5	170866835	170867144	170866989	ENSG00000244501.3	+	misc_RNA	KNOWN	RN7SL623P	1	1	-0.130401
chr5	170896929	170904461	170900695	ENSG00000253966.1	+	processed_pseudogene	KNOWN	CTC-455F18.3	1	2	-0.672792
chr5	171251866	171252982	171252424	ENSG00000253213.1	+	processed_pseudogene	KNOWN	RP11-546B8.3	1	1	-0.115700
chr5	171305981	171308755	171307368	ENSG00000275038.1	-	protein_coding	KNOWN	RP11-546B8.6	1	1	-0.108148
chr5	171309284	171312134	171310709	ENSG00000164438.5	+	protein_coding	KNOWN	TLX3	1	3	0.479990
chr5	171345343	171345630	171345486	ENSG00000213393.5	-	processed_pseudogene	KNOWN	RP11-546B8.1	1	1	0.497631
chr5	171359117	171359412	171359264	ENSG00000265740.2	+	misc_RNA	KNOWN	RN7SL339P	1	1	0.429433
chr5	171365595	171367693	171366644	ENSG00000254256.1	+	processed_pseudogene	KNOWN	RPSAP71	1	4	0.429433
chr5	171366118	171366252	171366185	ENSG00000206909.1	+	snoRNA	NOVEL	SNORA70	1	1	0.429433
chr5	171366299	171366611	171366455	ENSG00000254012.1	+	processed_pseudogene	KNOWN	RP11-546B8.5	1	1	0.429433
chr5	171386656	171386760	171386708	ENSG00000264249.1	-	miRNA	KNOWN	MIR3912	1	1	0.301915
chr5	171387116	171411137	171399126	ENSG00000181163.13	+	protein_coding	KNOWN	NPM1	12	12	0.014934
chr5	171419656	171457623	171438639	ENSG00000156427.7	+	protein_coding	KNOWN	FGF18	1	5	0.442712
chr5	171770530	171770720	171770625	ENSG00000264303.1	+	miRNA	NOVEL	AC011410.1	1	1	0.040593
chr5	171773652	171774739	171774195	ENSG00000253110.1	+	lincRNA	KNOWN	CTB-78H18.1	1	2	0.040593
chr5	171785872	171794598	171790235	ENSG00000185662.8	+	protein_coding	KNOWN	SMIM23	2	5	0.055045
chr5	171861549	172006873	171934211	ENSG00000072803.17	-	protein_coding	KNOWN	FBXW11	12	14	0.116066
chr5	172042073	172188386	172115229	ENSG00000072786.12	-	protein_coding	KNOWN	STK10	16	19	0.544826
chr5	172194172	172203452	172198812	ENSG00000214360.4	+	protein_coding	KNOWN	EFCAB9	1	4	0.540088
chr5	172209640	172284071	172246855	ENSG00000168246.5	-	protein_coding	KNOWN	UBTD2	1	3	0.179397
chr5	172252334	172252478	172252406	ENSG00000212529.1	-	snoRNA	NOVEL	SNORA57	1	1	0.349150
chr5	172254418	172255439	172254928	ENSG00000253218.1	-	processed_pseudogene	KNOWN	KLF3P1	1	1	0.349150
chr5	172279202	172279315	172279258	ENSG00000222732.1	+	miRNA	NOVEL	AC008671.1	1	1	0.076138
chr5	172325181	172454523	172389852	ENSG00000174705.11	-	protein_coding	KNOWN	SH3PXD2B	4	13	0.452710
chr5	172557392	172559014	172558203	ENSG00000254299.1	-	lincRNA	KNOWN	CTB-54I1.1	1	3	0.309299
chr5	172609094	172609444	172609269	ENSG00000280318.1	-	TEC	KNOWN	CTB-79E8.4	1	1	0.200324
chr5	172641266	172691540	172666403	ENSG00000214357.8	+	protein_coding	KNOWN	NEURL1B	3	5	0.456526
chr5	172656522	172656713	172656617	ENSG00000253683.1	-	processed_pseudogene	KNOWN	CTB-79E8.3	1	1	0.512930
chr5	172662165	172662263	172662214	ENSG00000265160.1	+	miRNA	KNOWN	MIR5003	1	1	0.512930
chr5	172690454	172697720	172694087	ENSG00000253445.1	-	antisense	KNOWN	CTB-79E8.2	1	2	0.713949
chr5	172758226	172762556	172760391	ENSG00000253295.1	+	antisense	KNOWN	RP11-779O18.1	1	3	0.594492
chr5	172762521	172763258	172762889	ENSG00000213386.3	-	processed_pseudogene	KNOWN	RP11-779O18.2	1	1	0.594492
chr5	172762980	172777774	172770377	ENSG00000253736.1	+	antisense	KNOWN	RP11-779O18.3	1	2	0.651828
chr5	172768090	172771195	172769642	ENSG00000120129.5	-	protein_coding	KNOWN	DUSP1	1	4	0.636515
chr5	172779982	172780094	172780038	ENSG00000206741.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.703589
chr5	172785262	172785424	172785343	ENSG00000270243.1	-	processed_pseudogene	KNOWN	RP11-779O18.4	1	1	0.703589
chr5	172816621	172819958	172818289	ENSG00000253628.1	+	lincRNA	KNOWN	RP11-536N17.1	1	2	0.353619
chr5	172834275	172952685	172893480	ENSG00000113719.15	+	protein_coding	KNOWN	ERGIC1	14	10	0.802250
chr5	172954786	172959392	172957089	ENSG00000204758.7	-	antisense	KNOWN	CTC-308K20.1	3	5	0.846235
chr5	172954907	172957162	172956034	ENSG00000254295.1	+	lincRNA	KNOWN	CTC-308K20.2	1	3	0.846235
chr5	172958729	172969771	172964250	ENSG00000037241.7	+	protein_coding	KNOWN	RPL26L1	6	4	0.846235
chr5	172975511	172976374	172975942	ENSG00000253785.1	+	processed_pseudogene	KNOWN	CTC-308K20.3	1	1	0.370147
chr5	172983757	173035445	173009601	ENSG00000113732.8	+	protein_coding	KNOWN	ATP6V0E1	4	4	0.288761
chr5	172986680	172987198	172986939	ENSG00000254328.1	+	processed_pseudogene	KNOWN	CTC-308K20.4	1	2	0.370147
chr5	173020728	173020928	173020828	ENSG00000212402.1	+	snoRNA	KNOWN	SNORA74B	1	1	0.299505
chr5	173052452	173052555	173052503	ENSG00000207210.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.347493
chr5	173056352	173139284	173097818	ENSG00000164463.12	+	protein_coding	KNOWN	CREBRF	6	9	0.357883
chr5	173085342	173086210	173085776	ENSG00000253439.1	-	processed_pseudogene	KNOWN	CDC42P5	1	2	0.308200
chr5	173144162	173145039	173144600	ENSG00000253172.1	-	antisense	KNOWN	CTC-209H22.3	1	2	0.472264
chr5	173144442	173164387	173154414	ENSG00000113734.17	+	protein_coding	KNOWN	BNIP1	5	7	0.404126
chr5	173155552	173155834	173155693	ENSG00000281353.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.377810
chr5	173225836	173226423	173226129	ENSG00000254200.1	-	processed_pseudogene	KNOWN	RPL7AP33	1	1	0.084937
chr5	173232109	173235357	173233733	ENSG00000183072.9	-	protein_coding	KNOWN	NKX2-5	4	2	0.581508
chr5	173254190	173254290	173254240	ENSG00000201277.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.314384
chr5	173292517	173292619	173292568	ENSG00000252169.1	-	rRNA	KNOWN	RNA5SP200	1	1	0.349790
chr5	173314713	173329503	173322108	ENSG00000113739.10	-	protein_coding	KNOWN	STC2	5	4	0.418307
chr5	173347455	173347536	173347495	ENSG00000274994.1	+	miRNA	KNOWN	MIR8056	1	1	0.401039
chr5	173362134	173362240	173362187	ENSG00000199219.1	-	snRNA	KNOWN	RNU6-500P	1	1	0.572474
chr5	173414035	173451165	173432600	ENSG00000253968.1	+	lincRNA	KNOWN	CTB-32H22.1	1	4	-0.038436
chr5	173463500	173484584	173474042	ENSG00000253141.1	+	lincRNA	KNOWN	CTB-164N12.1	2	3	0.309222
chr5	173562478	173573199	173567838	ENSG00000253768.1	+	lincRNA	KNOWN	CTB-33O18.1	1	3	0.343555
chr5	173574938	173576275	173575606	ENSG00000254164.1	+	lincRNA	KNOWN	CTB-33O18.2	1	2	0.084937
chr5	173579643	173585068	173582355	ENSG00000253955.1	+	antisense	KNOWN	CTB-33O18.3	2	4	0.084937
chr5	173607514	173616660	173612087	ENSG00000145919.10	-	protein_coding	KNOWN	BOD1	7	4	0.173319
chr5	173642519	173658194	173650356	ENSG00000253959.1	+	lincRNA	KNOWN	CTB-43E15.1	1	2	0.094199
chr5	173689459	173705849	173697654	ENSG00000253428.1	+	lincRNA	KNOWN	CTB-43E15.2	1	3	0.475499
chr5	173707614	173746211	173726912	ENSG00000253686.1	-	lincRNA	KNOWN	LINC01484	3	3	0.382252
chr5	173730078	173730177	173730127	ENSG00000263401.1	+	miRNA	NOVEL	AC008674.1	1	1	0.127793
chr5	173786790	173809039	173797914	ENSG00000254211.5	-	lincRNA	KNOWN	LINC01485	5	4	0.476116
chr5	173888280	173961976	173925128	ENSG00000113742.12	+	protein_coding	KNOWN	CPEB4	10	10	0.030684
chr5	173973779	174006140	173989959	ENSG00000185056.9	+	protein_coding	KNOWN	C5orf47	2	5	-0.218487
chr5	174039751	174040240	174039995	ENSG00000253109.1	-	processed_pseudogene	KNOWN	RPL12P22	1	1	-0.094709
chr5	174045604	174243501	174144552	ENSG00000170091.10	+	protein_coding	KNOWN	HMP19	9	6	-0.007608
chr5	174056060	174056585	174056322	ENSG00000253244.1	-	antisense	KNOWN	RP11-619L12.3	1	2	0.023820
chr5	174081506	174086559	174084032	ENSG00000253447.5	-	antisense	KNOWN	RP11-619L12.4	3	4	-0.117931
chr5	174173101	174181814	174177457	ENSG00000254011.1	+	sense_intronic	KNOWN	CTC-229L21.1	1	2	-0.172554
chr5	174329612	174330503	174330057	ENSG00000249722.1	+	lincRNA	KNOWN	CTC-430J12.2	1	2	0.296728
chr5	174336295	174532457	174434376	ENSG00000249306.5	+	lincRNA	KNOWN	LINC01411	6	6	-0.058719
chr5	174513305	174514307	174513806	ENSG00000213376.4	+	processed_pseudogene	KNOWN	GAPDHP71	1	1	-0.021537
chr5	174561776	174562063	174561919	ENSG00000249031.1	+	processed_pseudogene	KNOWN	SUMO2P6	1	1	0.108965
chr5	174618164	174625775	174621969	ENSG00000250256.1	+	lincRNA	KNOWN	RP11-267A15.3	1	4	-0.113912
chr5	174632932	174633209	174633070	ENSG00000248929.1	+	processed_pseudogene	KNOWN	HIGD1AP3	1	1	0.172162
chr5	174724533	174730893	174727713	ENSG00000120149.8	+	protein_coding	KNOWN	MSX2	2	2	0.170869
chr5	174751304	174850725	174801014	ENSG00000251670.1	+	lincRNA	KNOWN	CTD-2532K18.1	1	4	-0.243057
chr5	174751734	174751787	174751760	ENSG00000266890.1	+	miRNA	KNOWN	MIR4634	1	1	-0.425692
chr5	174820027	174826324	174823175	ENSG00000251144.1	+	lincRNA	KNOWN	CTD-2532K18.2	1	2	-0.177615
chr5	174919082	174995513	174957297	ENSG00000204754.3	-	lincRNA	KNOWN	CTC-281M20.1	1	3	-0.313561
chr5	174923090	174923945	174923517	ENSG00000251122.1	+	processed_pseudogene	KNOWN	NIFKP2	1	1	-0.108921
chr5	174926541	174926717	174926629	ENSG00000248293.1	+	unprocessed_pseudogene	KNOWN	CTC-281M20.3	1	1	-0.108921
chr5	174986295	174987050	174986672	ENSG00000249403.1	+	lincRNA	KNOWN	CTC-281M20.4	1	2	-0.555706
chr5	175290731	175291252	175290991	ENSG00000248355.1	+	processed_pseudogene	KNOWN	ARL2BPP6	1	2	-0.237714
chr5	175440039	175444208	175442123	ENSG00000184845.3	-	protein_coding	KNOWN	DRD1	1	2	-0.259481
chr5	175477062	175529742	175503402	ENSG00000164466.12	+	protein_coding	KNOWN	SFXN1	12	11	0.145475
chr5	175483595	175484192	175483893	ENSG00000270839.1	-	processed_pseudogene	KNOWN	CTC-571O20.1	1	1	0.296682
chr5	175628188	175628462	175628325	ENSG00000222111.1	+	misc_RNA	KNOWN	RN7SKP148	1	1	0.245701
chr5	175658030	175686242	175672136	ENSG00000113749.6	+	protein_coding	KNOWN	HRH2	2	3	0.231951
chr5	175703898	175704004	175703951	ENSG00000200648.1	+	snRNA	KNOWN	RNU6-226P	1	1	0.407768
chr5	175709603	175710756	175710179	ENSG00000279496.1	+	TEC	KNOWN	CTC-251I16.1	1	1	0.243399
chr5	175796310	175884020	175840165	ENSG00000145920.14	+	protein_coding	KNOWN	CPLX2	10	5	0.300329
chr5	175903874	175904371	175904122	ENSG00000280068.1	-	TEC	KNOWN	RP11-91H12.1	1	1	0.130986
chr5	175906939	175958538	175932738	ENSG00000250820.1	-	sense_overlapping	KNOWN	RP11-91H12.4	1	2	0.267971
chr5	175917873	176034680	175976276	ENSG00000051596.9	-	protein_coding	KNOWN	THOC3	12	6	0.127234
chr5	175935209	175935301	175935255	ENSG00000266083.1	-	miRNA	NOVEL	AC138965.1	1	1	0.086774
chr5	175972611	175985856	175979233	ENSG00000250801.1	+	antisense	KNOWN	RP11-91H12.3	3	3	0.012191
chr5	176006145	176007387	176006766	ENSG00000272494.1	+	unprocessed_pseudogene	KNOWN	OR1X1P	1	2	0.013136
chr5	176040744	176042878	176041811	ENSG00000250992.1	+	antisense	KNOWN	RP11-826N14.1	1	2	0.232542
chr5	176049678	176062021	176055849	ENSG00000248469.1	-	antisense	KNOWN	RP11-826N14.2	1	3	0.243697
chr5	176060689	176132258	176096473	ENSG00000182230.11	+	protein_coding	KNOWN	FAM153B	21	27	0.033830
chr5	176124210	176131461	176127835	ENSG00000251458.1	-	lincRNA	KNOWN	RP11-844P9.1	1	2	0.068566
chr5	176137157	176155738	176146447	ENSG00000251623.1	+	lincRNA	KNOWN	RP11-826N14.4	1	5	-0.075756
chr5	176143085	176199295	176171190	ENSG00000248596.6	-	lincRNA	KNOWN	RP11-844P9.2	7	23	0.021005
chr5	176203314	176203710	176203512	ENSG00000270989.1	-	processed_pseudogene	KNOWN	RP11-844P9.4	1	1	0.493013
chr5	176238367	176345991	176292179	ENSG00000170085.17	+	protein_coding	KNOWN	SIMC1	11	12	-0.020321
chr5	176308063	176309013	176308538	ENSG00000251667.1	+	processed_pseudogene	KNOWN	BRCC3P1	1	1	0.185651
chr5	176346061	176361968	176354014	ENSG00000122203.14	-	protein_coding	KNOWN	KIAA1191	13	9	0.044607
chr5	176347941	176353584	176350762	ENSG00000250909.1	+	antisense	KNOWN	RP11-843P14.2	1	3	0.018696
chr5	176354206	176356168	176355187	ENSG00000251414.1	+	antisense	KNOWN	RP11-843P14.1	1	2	0.099371
chr5	176365468	176401865	176383666	ENSG00000175414.6	+	protein_coding	KNOWN	ARL10	4	4	0.429651
chr5	176367946	176368031	176367988	ENSG00000221464.1	+	miRNA	KNOWN	MIR1271	1	1	0.099371
chr5	176383938	176388975	176386456	ENSG00000048162.19	-	protein_coding	KNOWN	NOP16	12	8	0.295923
chr5	176388747	176389771	176389259	ENSG00000146066.2	+	protein_coding	KNOWN	HIGD2A	1	2	0.295923
chr5	176392455	176416569	176404512	ENSG00000175416.12	-	protein_coding	KNOWN	CLTB	7	6	0.688189
chr5	176439090	176439238	176439164	ENSG00000280139.1	+	TEC	KNOWN	CTB-162J7.1	1	1	0.365315
chr5	176447628	176510074	176478851	ENSG00000113194.12	+	protein_coding	KNOWN	FAF2	6	11	0.559019
chr5	176451762	176451872	176451817	ENSG00000221373.1	+	miRNA	NOVEL	AC010297.1	1	1	0.393046
chr5	176526697	176538025	176532361	ENSG00000146083.11	-	protein_coding	KNOWN	RNF44	8	11	0.765152
chr5	176542511	176595974	176569242	ENSG00000074276.10	+	protein_coding	KNOWN	CDHR2	7	32	0.668569
chr5	176547433	176547726	176547579	ENSG00000243959.3	-	misc_RNA	KNOWN	RN7SL684P	1	1	0.964757
chr5	176556704	176556805	176556754	ENSG00000207420.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.653009
chr5	176595802	176610133	176602967	ENSG00000169258.6	-	protein_coding	KNOWN	GPRIN1	1	2	0.734368
chr5	176620084	176630556	176625320	ENSG00000074317.10	-	protein_coding	KNOWN	SNCB	6	7	0.555938
chr5	176629439	176629500	176629469	ENSG00000266329.1	-	miRNA	KNOWN	MIR4281	1	1	0.544199
chr5	176630682	176646641	176638661	ENSG00000175766.11	+	protein_coding	KNOWN	EIF4E1B	8	9	0.764902
chr5	176647387	176659054	176653220	ENSG00000048140.17	+	protein_coding	KNOWN	TSPAN17	9	9	0.582122
chr5	176707356	176726243	176716799	ENSG00000248484.1	-	lincRNA	KNOWN	RP11-375B1.1	1	2	0.584743
chr5	176726942	176739458	176733200	ENSG00000251446.1	-	lincRNA	KNOWN	RP11-375B1.2	1	4	0.327868
chr5	176743205	176743871	176743538	ENSG00000248859.2	+	lincRNA	KNOWN	LINC01574	1	2	0.246115
chr5	176810477	176880895	176845686	ENSG00000113763.10	+	protein_coding	KNOWN	UNC5A	3	15	0.618211
chr5	176880869	176899332	176890100	ENSG00000160883.10	-	protein_coding	KNOWN	HK3	6	19	0.816164
chr5	176905005	177022633	176963819	ENSG00000087206.16	-	protein_coding	KNOWN	UIMC1	14	15	0.511215
chr5	177022696	177081189	177051942	ENSG00000113761.11	+	protein_coding	KNOWN	ZNF346	10	9	0.708559
chr5	177051714	177052963	177052338	ENSG00000251666.1	+	sense_intronic	KNOWN	ZNF346-IT1	1	2	0.566901
chr5	177086886	177098144	177092515	ENSG00000160867.14	+	protein_coding	KNOWN	FGFR4	16	18	0.902592
chr5	177133025	177300215	177216620	ENSG00000165671.18	+	protein_coding	KNOWN	NSD1	15	24	0.617345
chr5	177264766	177265241	177265003	ENSG00000240729.1	+	processed_pseudogene	KNOWN	CTD-2301A4.3	1	1	0.413920
chr5	177265580	177266588	177266084	ENSG00000270706.1	-	processed_pseudogene	KNOWN	PRMT1P1	1	1	0.413920
chr5	177301198	177303744	177302471	ENSG00000169228.13	-	protein_coding	KNOWN	RAB24	9	9	0.888197
chr5	177301461	177312757	177307109	ENSG00000213347.10	-	protein_coding	KNOWN	MXD3	9	11	0.906645
chr5	177303774	177306959	177305366	ENSG00000169230.9	+	protein_coding	KNOWN	PRELID1	8	5	0.888197
chr5	177331562	177351852	177341707	ENSG00000169223.14	-	protein_coding	KNOWN	LMAN2	8	8	0.942782
chr5	177346073	177346426	177346249	ENSG00000239393.1	+	processed_pseudogene	KNOWN	CTD-2301A4.1	1	1	0.940874
chr5	177357837	177372601	177365219	ENSG00000169220.17	+	protein_coding	KNOWN	RGS14	13	15	0.979941
chr5	177379235	177398848	177389041	ENSG00000131183.10	+	protein_coding	KNOWN	SLC34A1	5	13	1.144729
chr5	177400107	177400636	177400371	ENSG00000196570.2	-	protein_coding	KNOWN	PFN3	1	1	1.241859
chr5	177402140	177409576	177405858	ENSG00000131187.9	-	protein_coding	KNOWN	F12	6	14	1.241859
chr5	177403204	177442901	177423052	ENSG00000198055.10	+	protein_coding	KNOWN	GRK6	11	16	1.191737
chr5	177438503	177447699	177443101	ENSG00000246334.2	-	antisense	KNOWN	PRR7-AS1	4	4	1.080118
chr5	177446445	177456286	177451365	ENSG00000131188.11	+	protein_coding	KNOWN	PRR7	4	4	1.253958
chr5	177456608	177474401	177465504	ENSG00000113758.13	-	protein_coding	KNOWN	DBN1	11	15	1.414460
chr5	177476631	177479656	177478143	ENSG00000279821.1	-	TEC	KNOWN	RP11-1334A24.5	1	1	1.603770
chr5	177483394	177497606	177490500	ENSG00000196923.13	-	protein_coding	KNOWN	PDLIM7	16	14	1.647973
chr5	177494995	177503647	177499321	ENSG00000248996.1	+	antisense	KNOWN	RP11-1334A24.6	1	2	1.686353
chr5	177501907	177511274	177506590	ENSG00000146094.13	-	protein_coding	KNOWN	DOK3	13	6	1.670903
chr5	177511577	177517469	177514523	ENSG00000183258.11	-	protein_coding	KNOWN	DDX41	19	17	1.572846
chr5	177519788	177554541	177537164	ENSG00000146067.15	-	protein_coding	KNOWN	FAM193B	19	12	1.209392
chr5	177554824	177555364	177555094	ENSG00000272459.1	+	lincRNA	KNOWN	RP11-1277A3.3	1	1	0.735199
chr5	177592158	177596124	177594141	ENSG00000184840.11	+	protein_coding	KNOWN	TMED9	6	5	0.863964
chr5	177600100	177610347	177605223	ENSG00000027847.13	+	protein_coding	KNOWN	B4GALT7	8	6	0.864738
chr5	177611253	177619754	177615503	ENSG00000247679.2	+	antisense	KNOWN	RP11-1277A3.1	1	3	0.886767
chr5	177619059	177672209	177645634	ENSG00000246596.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-1277A3.2	3	5	0.356421
chr5	177682294	177713969	177698131	ENSG00000249849.1	+	antisense	KNOWN	RP11-1101H11.1	1	3	0.260307
chr5	177707981	177783398	177745689	ENSG00000170074.19	-	protein_coding	KNOWN	FAM153A	23	27	0.241689
chr5	177782197	177794396	177788296	ENSG00000249109.1	+	antisense	KNOWN	RP11-1026M7.2	1	3	0.281474
chr5	177801204	177803344	177802274	ENSG00000248943.1	-	lincRNA	KNOWN	RP11-1026M7.3	1	2	-0.035243
chr5	177809407	177950732	177880069	ENSG00000170089.15	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-423H2.1	13	6	0.196249
chr5	177836434	177837646	177837040	ENSG00000214351.5	-	unprocessed_pseudogene	KNOWN	OR1X5P	1	2	-0.101733
chr5	177857945	177871194	177864569	ENSG00000249186.1	-	antisense	KNOWN	RP11-423H2.5	3	3	0.034355
chr5	177908465	177908557	177908511	ENSG00000221204.1	+	miRNA	NOVEL	AC106795.1	1	1	0.405150
chr5	177939622	177983054	177961338	ENSG00000250101.1	+	lincRNA	KNOWN	RP11-1252I4.2	1	2	0.566241
chr5	177950335	177963960	177957147	ENSG00000249684.5	+	antisense	KNOWN	RP11-423H2.3	4	4	0.584052
chr5	177967004	177967457	177967230	ENSG00000280207.1	+	lincRNA	KNOWN	RP11-423H2.4	1	1	0.584052
chr5	177971316	177972281	177971798	ENSG00000249129.1	+	processed_pseudogene	KNOWN	SUDS3P1	1	1	0.573206
chr5	177992235	177996242	177994238	ENSG00000175325.2	-	protein_coding	KNOWN	PROP1	1	3	0.575366
chr5	178006405	178055559	178030982	ENSG00000204677.10	+	protein_coding	KNOWN	FAM153C	13	12	0.030986
chr5	178055604	178056194	178055899	ENSG00000218227.3	+	processed_pseudogene	KNOWN	RP11-889L3.1	1	1	0.224442
chr5	178113443	178126087	178119765	ENSG00000145911.5	+	protein_coding	KNOWN	N4BP3	1	5	0.748888
chr5	178130996	178150565	178140780	ENSG00000145916.18	+	protein_coding	KNOWN	RMND5B	12	12	0.918696
chr5	178149460	178153967	178151713	ENSG00000145912.8	-	protein_coding	KNOWN	NHP2	6	4	0.618558
chr5	178165702	178166562	178166132	ENSG00000251211.1	+	processed_pseudogene	KNOWN	RP11-889L3.4	1	1	0.576403
chr5	178185719	178187299	178186509	ENSG00000244234.1	-	processed_pseudogene	KNOWN	GMCL1P1	1	1	0.627486
chr5	178204507	178211180	178207843	ENSG00000197451.10	+	protein_coding	KNOWN	HNRNPAB	9	12	0.555067
chr5	178208497	178232791	178220644	ENSG00000175309.14	-	protein_coding	KNOWN	PHYKPL	18	14	0.700314
chr5	178237618	178590555	178414086	ENSG00000050767.15	-	protein_coding	KNOWN	COL23A1	3	29	0.409721
chr5	178344843	178345316	178345079	ENSG00000271681.1	+	processed_pseudogene	KNOWN	RP11-1259L22.2	1	1	0.570253
chr5	178350867	178352250	178351558	ENSG00000253698.1	+	antisense	KNOWN	RP11-1259L22.1	1	2	0.280753
chr5	178377924	178378220	178378072	ENSG00000242341.3	+	misc_RNA	KNOWN	RN7SL646P	1	1	0.395384
chr5	178438681	178443094	178440887	ENSG00000245688.1	-	sense_intronic	KNOWN	CTB-26E19.1	1	2	0.461226
chr5	178602664	178630615	178616639	ENSG00000113240.12	-	protein_coding	KNOWN	CLK4	15	15	0.207776
chr5	178619728	178619998	178619863	ENSG00000252464.1	-	misc_RNA	KNOWN	RN7SKP70	1	1	0.091992
chr5	178711592	178730702	178721147	ENSG00000169131.10	-	protein_coding	KNOWN	ZNF354A	3	5	0.132565
chr5	178764861	178818435	178791648	ENSG00000250420.8	-	transcribed_unprocessed_pseudogene	KNOWN	AACSP1	2	11	0.298817
chr5	178825382	178825571	178825476	ENSG00000274813.1	+	unprocessed_pseudogene	KNOWN	RP11-21I4.3	1	1	-0.076984
chr5	178840097	178841134	178840615	ENSG00000253725.1	+	processed_pseudogene	KNOWN	RP11-21I4.2	1	1	0.267079
chr5	178842028	178842235	178842131	ENSG00000278441.1	-	processed_pseudogene	KNOWN	RP11-21I4.4	1	1	0.267079
chr5	178859953	178888122	178874037	ENSG00000178338.10	+	protein_coding	KNOWN	ZNF354B	4	5	0.442710
chr5	178884715	178884879	178884797	ENSG00000206624.1	+	snRNA	KNOWN	RNU1-39P	1	1	0.307720
chr5	178895894	178933212	178914553	ENSG00000198939.7	+	protein_coding	KNOWN	ZFP2	5	5	0.027529
chr5	178909710	178910609	178910159	ENSG00000213328.3	-	processed_pseudogene	KNOWN	RP11-281O15.2	1	1	0.028958
chr5	178922064	178922716	178922390	ENSG00000253869.1	+	processed_pseudogene	KNOWN	PIGFP1	1	1	0.075118
chr5	178938677	178939223	178938950	ENSG00000272431.1	-	lincRNA	KNOWN	RP11-281O15.8	1	1	0.152746
chr5	178941191	178966433	178953812	ENSG00000178187.7	+	protein_coding	KNOWN	ZNF454	3	5	0.055290
chr5	178969390	178990116	178979753	ENSG00000254035.1	+	antisense	KNOWN	RP11-281O15.4	1	2	0.209456
chr5	178978327	178996206	178987266	ENSG00000113262.14	-	protein_coding	KNOWN	GRM6	5	11	0.356932
chr5	178997969	178998815	178998392	ENSG00000254158.1	-	processed_pseudogene	KNOWN	RP11-281O15.5	1	1	0.627029
chr5	179023752	179035064	179029408	ENSG00000234284.6	+	protein_coding	KNOWN	ZNF879	4	5	-0.110677
chr5	179060415	179083537	179071976	ENSG00000177932.6	+	protein_coding	KNOWN	ZNF354C	1	5	0.289406
chr5	179082680	179083194	179082937	ENSG00000253144.1	-	processed_pseudogene	KNOWN	RP11-281O15.7	1	1	0.328795
chr5	179110851	179345430	179228140	ENSG00000087116.13	-	protein_coding	KNOWN	ADAMTS2	5	22	0.866576
chr5	179377505	179378865	179378185	ENSG00000253979.1	+	lincRNA	KNOWN	RP11-443C10.2	1	2	0.813016
chr5	179377531	179378761	179378146	ENSG00000253163.1	-	lincRNA	KNOWN	RP11-443C10.1	1	2	0.813016
chr5	179385819	179385992	179385905	ENSG00000253617.2	-	processed_pseudogene	KNOWN	RP11-443C10.3	1	1	0.813016
chr5	179455415	179456095	179455755	ENSG00000250674.1	+	lincRNA	KNOWN	RP11-798K23.1	1	2	0.360188
chr5	179492076	179492157	179492116	ENSG00000274716.1	-	snRNA	NOVEL	U4	1	1	0.421454
chr5	179503322	179515579	179509450	ENSG00000253652.1	-	lincRNA	KNOWN	RP11-798K23.4	1	2	0.347392
chr5	179522457	179525074	179523765	ENSG00000251545.2	+	unprocessed_pseudogene	KNOWN	RP11-798K23.3	1	4	0.258770
chr5	179527224	179527513	179527368	ENSG00000253520.1	-	processed_pseudogene	KNOWN	RP11-798K23.5	1	1	0.258770
chr5	179550558	179610026	179580292	ENSG00000176783.14	+	protein_coding	KNOWN	RUFY1	14	18	0.651787
chr5	179572156	179572741	179572448	ENSG00000249140.1	+	processed_pseudogene	KNOWN	PRDX2P3	1	1	0.581508
chr5	179595904	179603741	179599822	ENSG00000244945.1	-	antisense	KNOWN	RP11-1379J22.2	1	9	0.723124
chr5	179614178	179634784	179624481	ENSG00000169045.17	-	protein_coding	KNOWN	HNRNPH1	50	14	0.899453
chr5	179629151	179629410	179629280	ENSG00000273549.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.895927
chr5	179641544	179645046	179643295	ENSG00000204661.9	-	processed_transcript	KNOWN	C5orf60	8	6	0.911113
chr5	179651284	179652457	179651870	ENSG00000228259.3	+	unprocessed_pseudogene	KNOWN	RP11-1379J22.7	2	3	0.727228
chr5	179657762	179664432	179661097	ENSG00000250999.1	+	antisense	KNOWN	RP11-1379J22.5	3	3	0.727228
chr5	179678583	179680974	179679778	ENSG00000204659.4	-	protein_coding	KNOWN	CBY3	1	2	1.022899
chr5	179678628	179730925	179704776	ENSG00000127022.14	+	protein_coding	KNOWN	CANX	19	15	0.791152
chr5	179679032	179694768	179686900	ENSG00000225051.5	+	transcribed_processed_pseudogene	KNOWN	HMGB3P22	2	2	0.876552
chr5	179732850	179796511	179764680	ENSG00000161021.11	+	protein_coding	KNOWN	MAML1	4	5	0.804403
chr5	179793980	179796647	179795313	ENSG00000213316.9	+	protein_coding	KNOWN	LTC4S	8	5	0.961769
chr5	179797597	179806952	179802274	ENSG00000161013.16	-	protein_coding	KNOWN	MGAT4B	23	15	0.961769
chr5	179798278	179798346	179798312	ENSG00000221394.1	-	miRNA	KNOWN	MIR1229	1	1	0.961769
chr5	179806398	179838078	179822238	ENSG00000161011.19	+	protein_coding	KNOWN	SQSTM1	16	8	1.200118
chr5	179835133	179862173	179848653	ENSG00000161010.14	-	protein_coding	KNOWN	C5orf45	25	9	0.885599
chr5	179845832	179846152	179845992	ENSG00000222448.1	+	misc_RNA	KNOWN	RN7SKP150	1	1	0.983843
chr5	179847035	179847130	179847082	ENSG00000252202.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.983843
chr5	179859013	179861283	179860148	ENSG00000245317.2	+	lincRNA	KNOWN	CTC-241N9.1	1	2	0.765631
chr5	179862066	179907859	179884962	ENSG00000197226.12	-	protein_coding	KNOWN	TBC1D9B	20	22	0.872202
chr5	179911651	180072118	179991884	ENSG00000113269.13	-	protein_coding	KNOWN	RNF130	8	9	0.091098
chr5	179933805	179934196	179934000	ENSG00000242979.1	-	processed_pseudogene	KNOWN	RPS15AP18	1	1	0.013215
chr5	179936285	179936527	179936406	ENSG00000281431.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.013215
chr5	179939457	179940132	179939794	ENSG00000249876.1	-	processed_pseudogene	KNOWN	CTC-563A5.4	1	1	0.013215
chr5	179963615	179964419	179964017	ENSG00000249412.1	+	antisense	KNOWN	CTC-563A5.2	1	2	0.060108
chr5	180015292	180015402	180015347	ENSG00000198995.2	-	miRNA	KNOWN	MIR340	1	1	-0.064350
chr5	180078357	180081691	180080024	ENSG00000278965.1	-	TEC	KNOWN	RP11-39H3.2	1	1	0.083999
chr5	180085717	180087038	180086377	ENSG00000253480.1	-	processed_pseudogene	KNOWN	RP11-39H3.1	1	2	0.083999
chr5	180100791	180209153	180154972	ENSG00000146090.15	-	protein_coding	KNOWN	RASGEF1C	7	15	0.350024
chr5	180226378	180227000	180226689	ENSG00000229721.3	-	processed_pseudogene	KNOWN	RP11-252I14.1	1	1	0.084130
chr5	180233143	180292099	180262621	ENSG00000050748.17	-	protein_coding	KNOWN	MAPK9	13	12	0.027887
chr5	180257680	180258366	180258023	ENSG00000253908.1	+	processed_pseudogene	KNOWN	RP11-252I14.2	1	1	0.084650
chr5	180293245	180295253	180294249	ENSG00000248367.1	+	antisense	KNOWN	CTB-129O4.1	1	2	0.288531
chr5	180300690	180353387	180327038	ENSG00000131459.12	-	protein_coding	KNOWN	GFPT2	8	19	0.511807
chr5	180441559	180443238	180442398	ENSG00000250509.1	+	lincRNA	KNOWN	CTC-573N18.1	1	2	0.068013
chr5	180444509	180444612	180444560	ENSG00000200555.1	+	snRNA	KNOWN	RNU6-525P	1	1	0.068013
chr5	180494412	180578405	180536408	ENSG00000113300.11	+	protein_coding	KNOWN	CNOT6	7	14	0.242813
chr5	180534184	180534642	180534413	ENSG00000250749.1	-	processed_pseudogene	KNOWN	RP11-451H23.1	1	1	0.348513
chr5	180582445	180582530	180582487	ENSG00000263759.1	+	miRNA	NOVEL	AC122714.1	1	1	0.062548
chr5	180590103	180591540	180590821	ENSG00000161055.3	-	protein_coding	KNOWN	SCGB3A1	2	3	0.216171
chr5	180601506	180649624	180625565	ENSG00000037280.15	-	protein_coding	KNOWN	FLT4	12	30	0.708282
chr5	180671892	180672598	180672245	ENSG00000251352.1	-	processed_pseudogene	KNOWN	RP11-451H23.2	1	1	0.213007
chr5	180684766	180686546	180685656	ENSG00000248717.1	+	lincRNA	KNOWN	RP11-451H23.3	1	2	0.213007
chr5	180692832	180693763	180693297	ENSG00000236791.2	-	unprocessed_pseudogene	KNOWN	OR2AI1P	1	1	0.243995
chr5	180729586	180729737	180729661	ENSG00000199892.2	+	snRNA	KNOWN	RNU1-17P	1	1	-0.222882
chr5	180739042	180740099	180739570	ENSG00000174339.2	-	protein_coding	KNOWN	OR2Y1	1	1	-0.169336
chr5	180784782	180815652	180800217	ENSG00000131446.16	-	protein_coding	KNOWN	MGAT1	25	4	0.459937
chr5	180810401	180811384	180810892	ENSG00000280161.1	+	TEC	KNOWN	CTC-205M6.1	1	1	0.501293
chr5	180829954	180831605	180830779	ENSG00000278970.1	-	TEC	KNOWN	HEIH	1	1	0.176153
chr5	180830957	180835726	180833341	ENSG00000245060.6	+	lincRNA	KNOWN	LINC00847	5	3	0.167043
chr5	180847611	180861285	180854448	ENSG00000196670.13	-	protein_coding	KNOWN	ZFP62	7	4	0.116494
chr5	180899077	180950906	180924991	ENSG00000113303.11	+	protein_coding	KNOWN	BTNL8	11	8	-0.210200
chr5	180909838	180909927	180909882	ENSG00000222852.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.012265
chr5	180945756	180945907	180945831	ENSG00000243664.1	+	processed_pseudogene	KNOWN	RPS29P12	1	1	-0.300326
chr5	180967189	180970762	180968975	ENSG00000249287.1	-	processed_pseudogene	KNOWN	CTD-2593A12.3	1	2	-0.212689
chr5	180967848	180968567	180968207	ENSG00000248761.1	+	processed_pseudogene	KNOWN	CTD-2593A12.2	1	1	-0.267089
chr5	180982273	180982611	180982442	ENSG00000231228.4	+	processed_pseudogene	KNOWN	CTD-2593A12.4	1	1	-0.012345
chr5	180988845	181006727	180997786	ENSG00000168903.8	+	protein_coding	KNOWN	BTNL3	1	8	-0.344524
chr5	181007281	181007384	181007332	ENSG00000206686.1	+	snRNA	KNOWN	RNU6-1036P	1	1	-0.367440
chr5	181040225	181061523	181050874	ENSG00000165810.16	+	protein_coding	KNOWN	BTNL9	10	11	0.127794
chr5	181043403	181043484	181043443	ENSG00000277912.1	-	miRNA	KNOWN	MIR8089	1	1	-0.147196
chr5	181065086	181065677	181065381	ENSG00000241870.1	+	processed_pseudogene	KNOWN	CTB-14A14.1	1	1	0.361025
chr5	181099140	181100666	181099903	ENSG00000214295.4	-	processed_pseudogene	KNOWN	FOXO1B	1	1	0.270137
chr5	181114106	181115674	181114890	ENSG00000248560.1	+	processed_pseudogene	KNOWN	CTB-14A14.2	1	1	0.504815
chr5	181124357	181125304	181124830	ENSG00000185372.2	-	protein_coding	KNOWN	OR2V1	1	1	0.504815
chr5	181154943	181155890	181155416	ENSG00000182613.1	+	protein_coding	KNOWN	OR2V2	1	1	0.257051
chr5	181191046	181191852	181191449	ENSG00000248473.1	-	lincRNA	KNOWN	CTC-338M12.2	1	2	0.844333
chr5	181191924	181194429	181193176	ENSG00000250222.1	+	antisense	KNOWN	CTC-338M12.5	2	3	0.844333
chr5	181193924	181205293	181199608	ENSG00000146054.17	-	protein_coding	KNOWN	TRIM7	7	7	0.844333
chr5	181195496	181203103	181199299	ENSG00000250900.6	+	antisense	KNOWN	CTC-338M12.6	6	3	0.844333
chr5	181205361	181206120	181205740	ENSG00000248514.1	-	antisense	KNOWN	CTC-338M12.1	1	2	0.844333
chr5	181222499	181235809	181229154	ENSG00000146063.18	+	protein_coding	KNOWN	TRIM41	10	8	0.758087
chr5	181222566	181222633	181222599	ENSG00000264732.1	-	miRNA	KNOWN	MIR4638	1	1	0.522626
chr5	181224646	181230685	181227665	ENSG00000247049.2	-	antisense	KNOWN	CTC-338M12.7	1	2	0.583901
chr5	181236909	181248096	181242502	ENSG00000204628.11	-	protein_coding	KNOWN	GNB2L1	35	9	1.062039
chr5	181241814	181241892	181241853	ENSG00000272296.1	-	snoRNA	KNOWN	SNORD96A	1	1	1.062039
chr5	181243312	181243379	181243345	ENSG00000264549.1	-	snoRNA	KNOWN	SNORD95	1	1	1.062039
chr5	181246523	181272167	181259345	ENSG00000233937.6	+	processed_transcript	KNOWN	CTC-338M12.4	5	4	0.699244
chr5	181254417	181261139	181257778	ENSG00000183718.5	-	protein_coding	KNOWN	TRIM52	6	2	0.659881
chr5	181261212	181272307	181266759	ENSG00000248275.1	+	processed_transcript	KNOWN	TRIM52-AS1	4	3	0.622605
chr5	181281375	181283652	181282513	ENSG00000248103.1	+	lincRNA	KNOWN	CTC-338M12.9	1	2	0.480689
chr5	181291673	181295572	181293622	ENSG00000274525.1	+	unprocessed_pseudogene	KNOWN	CTC-338M12.13	1	3	0.027543
chr5	181301967	181302070	181302018	ENSG00000222533.1	+	snRNA	KNOWN	RNU6-705P	1	1	0.027543
chr5	181306502	181324685	181315593	ENSG00000238035.8	+	lincRNA	KNOWN	AC138035.2	3	8	0.301595
chr5	181329049	181331839	181330444	ENSG00000274553.1	-	processed_pseudogene	KNOWN	AC138035.3	1	1	0.282812
chr5	181329241	181342213	181335727	ENSG00000250765.5	+	lincRNA	KNOWN	AC138035.1	2	4	0.246868
chr5	181367268	181368262	181367765	ENSG00000230178.1	+	protein_coding	KNOWN	OR4F3	1	1	-0.144076
chr5	181378695	181379038	181378866	ENSG00000251035.1	-	processed_pseudogene	KNOWN	WBP1LP4	1	1	-0.178097
chr5	181471963	181472430	181472196	ENSG00000213285.4	+	processed_pseudogene	KNOWN	RPL23AP45	1	1	-0.021899
chr6	95124	95454	95289	ENSG00000271530.1	+	processed_pseudogene	KNOWN	WBP1LP12	1	1	0.196328
chr6	105919	106856	106387	ENSG00000220212.1	-	unprocessed_pseudogene	KNOWN	OR4F1P	1	1	0.196328
chr6	131910	144885	138397	ENSG00000170590.8	-	lincRNA	KNOWN	LINC00266-3	2	4	-0.147347
chr6	142272	145083	143677	ENSG00000217929.3	-	processed_pseudogene	KNOWN	CICP18	1	1	-0.147347
chr6	167607	170631	169119	ENSG00000218577.1	-	unprocessed_pseudogene	KNOWN	RP3-416J7.1	1	3	-0.000684
chr6	181466	205484	193475	ENSG00000263667.1	-	lincRNA	KNOWN	RP3-416J7.4	1	8	-0.078866
chr6	203313	206392	204852	ENSG00000205653.1	+	lincRNA	KNOWN	RP3-416J7.5	1	2	0.021602
chr6	291630	351355	321492	ENSG00000112679.14	+	protein_coding	KNOWN	DUSP22	16	8	0.282771
chr6	391739	411447	401593	ENSG00000137265.14	+	protein_coding	KNOWN	IRF4	5	10	0.161378
chr6	485133	693111	589122	ENSG00000112685.13	-	protein_coding	KNOWN	EXOC2	3	28	-0.215612
chr6	524171	525581	524876	ENSG00000230433.1	+	antisense	KNOWN	RP1-20B11.2	1	2	-0.440741
chr6	655939	656963	656451	ENSG00000188996.4	-	protein_coding	KNOWN	HUS1B	1	1	-0.354755
chr6	669081	670307	669694	ENSG00000219712.1	-	processed_pseudogene	KNOWN	RP11-532F6.2	1	1	-0.244883
chr6	708592	711405	709998	ENSG00000272463.1	-	lincRNA	KNOWN	RP11-532F6.3	1	1	0.074336
chr6	711533	750729	731131	ENSG00000271727.1	+	lincRNA	KNOWN	RP11-532F6.4	1	4	0.052515
chr6	761675	780648	771161	ENSG00000271911.1	+	lincRNA	KNOWN	RP11-532F6.5	1	3	-0.031623
chr6	774747	780214	777480	ENSG00000272485.1	-	lincRNA	KNOWN	RP11-284J1.1	1	2	-0.079961
chr6	905445	909006	907225	ENSG00000276687.1	-	lincRNA	KNOWN	RP5-1077H22.2	1	2	-0.026005
chr6	958324	962272	960298	ENSG00000278343.1	-	lincRNA	KNOWN	RP5-1077H22.1	1	2	0.075313
chr6	1026494	1027225	1026859	ENSG00000270937.1	-	lincRNA	KNOWN	RP5-856G1.1	1	1	0.034848
chr6	1079929	1104946	1092437	ENSG00000176515.1	+	lincRNA	KNOWN	RP5-856G1.2	1	3	0.115944
chr6	1312473	1314187	1313330	ENSG00000164379.5	+	protein_coding	KNOWN	FOXQ1	1	1	0.229495
chr6	1321698	1324022	1322860	ENSG00000281809.1	-	lincRNA	KNOWN	LINC01394	1	2	0.229495
chr6	1383790	1385066	1384428	ENSG00000261730.1	-	antisense	KNOWN	RP4-668J24.2	1	1	-0.013718
chr6	1389834	1395597	1392715	ENSG00000137273.3	+	protein_coding	KNOWN	FOXF2	1	2	0.571851
chr6	1390314	1390411	1390362	ENSG00000275859.1	-	miRNA	KNOWN	MIR6720	1	1	0.589111
chr6	1507322	1507598	1507460	ENSG00000243439.3	+	misc_RNA	KNOWN	RN7SL352P	1	1	0.105931
chr6	1513698	1515289	1514493	ENSG00000218027.2	-	processed_pseudogene	KNOWN	RP11-157J24.1	1	1	0.069508
chr6	1528364	1528911	1528637	ENSG00000272279.1	-	lincRNA	KNOWN	RP11-157J24.2	1	1	0.069508
chr6	1605531	1606079	1605805	ENSG00000280916.1	+	lincRNA	KNOWN	FOXCUT	1	2	0.142873
chr6	1609972	1613897	1611934	ENSG00000054598.6	+	protein_coding	KNOWN	FOXC1	1	1	0.746122
chr6	1623806	2245692	1934749	ENSG00000112699.10	-	protein_coding	KNOWN	GMDS	10	11	-0.002236
chr6	2245748	2482022	2363885	ENSG00000250903.8	+	lincRNA	KNOWN	GMDS-AS1	16	7	-0.084885
chr6	2341450	2341711	2341580	ENSG00000236086.4	+	processed_pseudogene	KNOWN	HMGN2P28	1	1	-0.146619
chr6	2409536	2409635	2409585	ENSG00000266252.1	-	miRNA	NOVEL	AL031768.1	1	1	-0.087642
chr6	2437549	2438249	2437899	ENSG00000272465.1	+	lincRNA	KNOWN	RP1-136B1.1	1	1	0.247910
chr6	2561947	2564143	2563045	ENSG00000280423.1	+	TEC	KNOWN	RP11-299J5.1	1	1	0.011373
chr6	2621913	2634603	2628258	ENSG00000164385.8	-	lincRNA	KNOWN	LINC01600	1	3	0.176688
chr6	2636936	2640001	2638468	ENSG00000228718.1	+	lincRNA	KNOWN	RP11-145H9.3	1	2	0.201815
chr6	2663629	2750966	2707297	ENSG00000145949.9	-	protein_coding	KNOWN	MYLK4	1	13	-0.003478
chr6	2765414	2786952	2776183	ENSG00000124535.15	+	protein_coding	KNOWN	WRNIP1	5	7	-0.175760
chr6	2832332	2842006	2837169	ENSG00000021355.12	-	protein_coding	KNOWN	SERPINB1	5	7	-0.084165
chr6	2854031	2854107	2854069	ENSG00000266750.1	-	miRNA	KNOWN	MIR4645	1	1	0.380753
chr6	2854657	2881407	2868032	ENSG00000230438.6	-	lincRNA	KNOWN	SERPINB9P1	2	4	0.323422
chr6	2887266	2903280	2895273	ENSG00000170542.5	-	protein_coding	KNOWN	SERPINB9	1	7	-0.002173
chr6	2910613	2912113	2911363	ENSG00000232999.1	-	unitary_pseudogene	KNOWN	RP1-90J20.10	1	2	0.434273
chr6	2916894	2917733	2917313	ENSG00000228365.1	+	lincRNA	KNOWN	RP1-90J20.2	1	2	0.434273
chr6	2948159	2972165	2960162	ENSG00000124570.17	-	protein_coding	KNOWN	SERPINB6	8	8	0.502999
chr6	2987967	2991173	2989570	ENSG00000244041.7	+	lincRNA	KNOWN	LINC01011	4	3	0.295900
chr6	2987987	3028869	3008428	ENSG00000124588.19	+	protein_coding	KNOWN	NQO2	9	10	0.514839
chr6	2989722	2999134	2994428	ENSG00000224846.2	-	antisense	KNOWN	RP1-90J20.8	2	2	0.566481
chr6	3023142	3023772	3023457	ENSG00000271361.1	-	processed_pseudogene	KNOWN	HTATSF1P2	1	1	0.486964
chr6	3033183	3033288	3033235	ENSG00000274855.1	+	processed_pseudogene	KNOWN	RP1-90J20.14	1	1	0.283782
chr6	3045384	3045800	3045592	ENSG00000232654.1	+	processed_pseudogene	KNOWN	FAM136BP	1	1	0.283782
chr6	3048835	3049211	3049023	ENSG00000217707.2	+	unprocessed_pseudogene	KNOWN	SERPINB8P1	1	1	0.283782
chr6	3055890	3056761	3056325	ENSG00000229282.1	+	lincRNA	KNOWN	RP1-40E16.2	1	2	0.361690
chr6	3063991	3115187	3089589	ENSG00000137275.13	+	protein_coding	KNOWN	RIPK1	3	11	0.432566
chr6	3068045	3068894	3068469	ENSG00000272277.1	-	antisense	KNOWN	RP1-40E16.12	1	1	0.361690
chr6	3088686	3088809	3088747	ENSG00000222248.1	-	rRNA	KNOWN	RNA5SP201	1	1	0.502854
chr6	3118374	3153578	3135976	ENSG00000137274.12	+	protein_coding	KNOWN	BPHL	12	9	0.487023
chr6	3138394	3153062	3145728	ENSG00000228170.1	-	antisense	KNOWN	RP1-40E16.11	1	2	0.525178
chr6	3153669	3157526	3155597	ENSG00000137267.5	-	protein_coding	KNOWN	TUBB2A	2	4	0.736661
chr6	3177044	3179764	3178404	ENSG00000216819.1	-	unprocessed_pseudogene	KNOWN	TUBB2BP1	1	3	0.577419
chr6	3182744	3195756	3189250	ENSG00000230269.6	-	lincRNA	KNOWN	RP1-40E16.9	2	3	0.409090
chr6	3224261	3231730	3227995	ENSG00000137285.9	-	protein_coding	KNOWN	TUBB2B	2	4	0.310657
chr6	3231403	3303373	3267388	ENSG00000180822.11	+	protein_coding	KNOWN	PSMG4	10	4	0.487462
chr6	3268962	3457022	3362992	ENSG00000137266.14	-	protein_coding	KNOWN	SLC22A23	12	12	0.285125
chr6	3311662	3313650	3312656	ENSG00000272320.1	+	antisense	KNOWN	RP11-506K6.4	1	1	0.213178
chr6	3594247	3624747	3609497	ENSG00000228793.1	-	lincRNA	KNOWN	RP1-223B1.1	1	3	0.130922
chr6	3693923	3694075	3693999	ENSG00000270477.1	-	processed_pseudogene	KNOWN	RP1-72E17.2	1	1	0.159106
chr6	3722614	3752026	3737320	ENSG00000168994.13	-	protein_coding	KNOWN	PXDC1	4	5	0.698659
chr6	3751111	3753871	3752491	ENSG00000270504.1	+	antisense	KNOWN	RP11-420L9.5	1	1	0.629649
chr6	3754099	3754840	3754469	ENSG00000219992.2	+	processed_pseudogene	KNOWN	RP11-420L9.2	1	2	0.629649
chr6	3831933	3855737	3843835	ENSG00000238158.6	+	sense_overlapping	KNOWN	RP11-420L9.4	2	2	0.344264
chr6	3849386	3851317	3850351	ENSG00000145945.5	+	protein_coding	KNOWN	FAM50B	2	2	0.293281
chr6	3893126	3894292	3893709	ENSG00000233068.2	+	lincRNA	KNOWN	RP1-140K8.1	2	3	0.431741
chr6	3904920	3911979	3908449	ENSG00000260604.2	-	lincRNA	KNOWN	RP1-140K8.5	1	1	0.383149
chr6	3913922	3914292	3914107	ENSG00000218472.2	-	processed_pseudogene	KNOWN	RP1-140K8.2	1	1	0.258502
chr6	3921847	3922146	3921996	ENSG00000217135.2	+	processed_pseudogene	KNOWN	RP1-140K8.3	1	1	0.258502
chr6	3941282	3941801	3941541	ENSG00000217566.2	+	processed_pseudogene	KNOWN	TDGF1P4	1	1	0.304212
chr6	3978062	3979099	3978580	ENSG00000216657.1	+	processed_pseudogene	KNOWN	GLRX3P2	1	1	0.077492
chr6	3982673	3984130	3983401	ENSG00000279926.1	+	TEC	KNOWN	RP3-406P24.5	1	1	0.077492
chr6	4018713	4019202	4018957	ENSG00000272248.1	+	lincRNA	KNOWN	RP3-406P24.4	1	1	-0.086154
chr6	4018843	4021215	4020029	ENSG00000230648.1	-	antisense	KNOWN	RP3-406P24.3	1	2	-0.086154
chr6	4021267	4064983	4043125	ENSG00000112739.16	+	protein_coding	KNOWN	PRPF4B	9	19	0.226825
chr6	4049434	4087344	4068389	ENSG00000145975.13	-	protein_coding	KNOWN	FAM217A	7	7	-0.013608
chr6	4079209	4130951	4105080	ENSG00000185689.15	+	protein_coding	KNOWN	C6orf201	7	7	-0.124931
chr6	4115689	4135597	4125643	ENSG00000198721.12	-	protein_coding	KNOWN	ECI2	11	11	-0.084037
chr6	4135423	4146053	4140738	ENSG00000254821.1	+	antisense	KNOWN	RP3-400B16.4	1	2	0.369977
chr6	4136072	4157385	4146728	ENSG00000234817.2	+	lincRNA	KNOWN	RP3-400B16.1	1	4	0.174821
chr6	4186624	4188109	4187366	ENSG00000237716.1	-	lincRNA	KNOWN	RP3-400B16.3	1	2	0.391006
chr6	4189116	4189806	4189461	ENSG00000216307.2	+	processed_pseudogene	KNOWN	RP3-400B16.2	1	1	0.391006
chr6	4345743	4347037	4346390	ENSG00000231811.2	-	lincRNA	KNOWN	RP3-527G5.1	1	3	0.115579
chr6	4427963	4428081	4428022	ENSG00000201185.1	+	rRNA	KNOWN	RNA5SP202	1	1	-0.253337
chr6	4491807	4495769	4493788	ENSG00000260239.1	+	lincRNA	KNOWN	RP11-274H24.1	1	2	0.230968
chr6	4529722	4530008	4529865	ENSG00000270695.1	+	processed_pseudogene	KNOWN	RP1-21P18.1	1	1	0.417582
chr6	4599287	4602420	4600853	ENSG00000260673.1	-	lincRNA	KNOWN	RP4-529N6.2	1	2	0.343249
chr6	4610656	4611304	4610980	ENSG00000205444.2	+	lincRNA	KNOWN	RP4-529N6.1	1	2	0.537792
chr6	4702463	4703779	4703121	ENSG00000217385.1	+	processed_pseudogene	KNOWN	PSMC1P11	1	1	0.351859
chr6	4706159	4955551	4830855	ENSG00000153046.17	+	protein_coding	KNOWN	CDYL	9	9	0.122539
chr6	4774526	4775408	4774967	ENSG00000236336.1	-	antisense	KNOWN	RP3-430A16.1	1	2	-0.043892
chr6	4979072	4979494	4979283	ENSG00000217030.1	+	processed_pseudogene	KNOWN	RP11-428J1.2	1	1	0.305822
chr6	4994732	5004063	4999397	ENSG00000124787.13	-	protein_coding	KNOWN	RPP40	7	8	0.261917
chr6	5029972	5043449	5036710	ENSG00000272142.1	+	lincRNA	KNOWN	RP11-428J1.5	3	2	0.462218
chr6	5031756	5054423	5043089	ENSG00000271978.1	-	lincRNA	KNOWN	RP11-428J1.4	1	2	0.389818
chr6	5065795	5066982	5066388	ENSG00000220685.3	-	processed_pseudogene	KNOWN	RP11-530A18.1	1	1	0.091992
chr6	5084581	5089487	5087034	ENSG00000219607.3	+	protein_coding	KNOWN	PPP1R3G	1	1	0.202315
chr6	5102593	5260939	5181766	ENSG00000214113.10	-	protein_coding	KNOWN	LYRM4	9	4	0.029140
chr6	5148233	5148322	5148277	ENSG00000265083.1	-	miRNA	KNOWN	MIR3691	1	1	-0.033539
chr6	5224728	5224797	5224762	ENSG00000280624.1	-	miRNA	NOVEL	AL162381.1	1	1	0.029931
chr6	5261044	5771580	5516312	ENSG00000145982.11	+	protein_coding	KNOWN	FARS2	4	7	-0.121896
chr6	5291030	5291388	5291209	ENSG00000220446.2	-	processed_pseudogene	KNOWN	RP3-520B18.1	1	1	0.173063
chr6	5451683	5458075	5454879	ENSG00000269985.1	-	antisense	KNOWN	RP1-232P20.1	2	3	-0.201508
chr6	5609227	5610195	5609711	ENSG00000218574.1	-	processed_pseudogene	KNOWN	HNRNPA1P37	1	1	-0.075597
chr6	5664985	5695272	5680128	ENSG00000270174.1	-	antisense	KNOWN	RP1-256G22.2	1	4	-0.055003
chr6	5788346	5788699	5788522	ENSG00000217239.3	-	processed_pseudogene	KNOWN	RP1-182O16.1	1	1	-0.032188
chr6	5817421	5818366	5817893	ENSG00000216360.1	-	processed_pseudogene	KNOWN	RP1-182O16.2	1	1	0.038973
chr6	5851506	5870220	5860863	ENSG00000233064.2	+	lincRNA	KNOWN	RP3-380B8.4	1	3	-0.120039
chr6	5918564	5918844	5918704	ENSG00000239472.3	-	misc_RNA	KNOWN	RN7SL221P	1	1	-0.087987
chr6	5972412	5974012	5973212	ENSG00000215057.4	+	processed_pseudogene	KNOWN	PKMP5	1	1	-0.011959
chr6	5997999	6007605	6002802	ENSG00000124785.8	-	protein_coding	KNOWN	NRN1	4	4	-0.092433
chr6	6144085	6321013	6232549	ENSG00000124491.15	-	protein_coding	KNOWN	F13A1	6	15	-0.307213
chr6	6169304	6169435	6169369	ENSG00000263572.2	-	miRNA	KNOWN	MIR7853	1	1	-0.320331
chr6	6346465	6622771	6484618	ENSG00000216863.9	-	antisense	KNOWN	LY86-AS1	6	8	-0.317138
chr6	6347081	6347381	6347231	ENSG00000241216.1	-	transcribed_processed_pseudogene	KNOWN	SNAPC5P1	1	1	0.056586
chr6	6534697	6535631	6535164	ENSG00000218868.1	+	processed_pseudogene	KNOWN	CNN3P1	1	1	-0.534681
chr6	6588108	6654983	6621545	ENSG00000112799.8	+	protein_coding	KNOWN	LY86	2	6	-0.290082
chr6	6680309	6683633	6681971	ENSG00000261211.1	-	lincRNA	KNOWN	RP1-80N2.3	1	1	-0.083375
chr6	6685148	6686984	6686066	ENSG00000279368.1	+	TEC	KNOWN	RP1-80N2.4	1	1	-0.083375
chr6	6692744	6711002	6701873	ENSG00000226281.2	-	lincRNA	KNOWN	RP1-80N2.2	1	2	-0.053129
chr6	6758276	6759291	6758783	ENSG00000224532.2	-	lincRNA	KNOWN	RP3-470L22.1	1	2	0.005483
chr6	6794915	6795402	6795158	ENSG00000219986.2	-	processed_pseudogene	KNOWN	BTF3P7	1	1	-0.130401
chr6	6901022	6918715	6909868	ENSG00000223342.2	-	lincRNA	KNOWN	RP3-429O6.1	1	2	0.011298
chr6	6938606	6938897	6938751	ENSG00000240936.3	-	misc_RNA	KNOWN	RN7SL554P	1	1	0.488293
chr6	6993191	6995554	6994372	ENSG00000203498.2	+	lincRNA	KNOWN	RP11-556O15.1	1	3	0.194475
chr6	7107597	7251980	7179788	ENSG00000124782.19	+	protein_coding	KNOWN	RREB1	10	13	0.238704
chr6	7183083	7185287	7184185	ENSG00000225092.2	+	sense_intronic	KNOWN	RP11-405O10.2	1	2	0.252883
chr6	7187582	7187686	7187634	ENSG00000201483.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.252883
chr6	7268306	7347446	7307876	ENSG00000124783.12	-	protein_coding	KNOWN	SSR1	10	10	0.151646
chr6	7276031	7298872	7287451	ENSG00000238221.1	+	antisense	KNOWN	RP11-69L16.4	1	3	0.331087
chr6	7326656	7389743	7358199	ENSG00000164304.15	-	protein_coding	KNOWN	CAGE1	9	14	0.039298
chr6	7331286	7331676	7331481	ENSG00000219375.1	-	processed_pseudogene	KNOWN	RP11-69L16.3	1	1	-0.132882
chr6	7338839	7339568	7339203	ENSG00000220472.1	-	processed_pseudogene	KNOWN	RP11-69L16.5	1	1	-0.132882
chr6	7340854	7342056	7341455	ENSG00000230570.1	-	processed_pseudogene	KNOWN	RP11-69L16.6	1	1	-0.132882
chr6	7389496	7418037	7403766	ENSG00000124784.8	+	protein_coding	KNOWN	RIOK1	5	17	0.258473
chr6	7481094	7482594	7481844	ENSG00000233503.1	-	processed_pseudogene	KNOWN	HNRNPLP1	1	1	0.252032
chr6	7506203	7506549	7506376	ENSG00000219993.1	+	processed_pseudogene	KNOWN	RP11-288G3.3	1	1	0.130060
chr6	7516600	7517840	7517220	ENSG00000234115.2	-	processed_pseudogene	KNOWN	RP11-288G3.4	1	1	0.345748
chr6	7540451	7541338	7540894	ENSG00000261189.1	-	antisense	KNOWN	RP3-512B11.3	1	1	0.114712
chr6	7541575	7586717	7564146	ENSG00000096696.13	+	protein_coding	KNOWN	DSP	3	24	0.074757
chr6	7590199	7611967	7601083	ENSG00000168566.12	+	protein_coding	KNOWN	SNRNP48	3	9	0.230954
chr6	7620422	7620878	7620650	ENSG00000236512.1	+	processed_pseudogene	KNOWN	RP3-336K20__B.2	1	1	0.145763
chr6	7726797	7881422	7804109	ENSG00000153162.8	+	protein_coding	KNOWN	BMP6	1	7	0.074781
chr6	7881517	7910814	7896165	ENSG00000239264.8	-	protein_coding	KNOWN	TXNDC5	5	10	0.071067
chr6	7881522	8064364	7972943	ENSG00000259040.5	-	protein_coding	KNOWN	BLOC1S5-TXNDC5	1	13	0.041744
chr6	7938430	7939322	7938876	ENSG00000217746.1	-	processed_pseudogene	KNOWN	RP1-303A1.1	1	1	0.292456
chr6	7986537	7988192	7987364	ENSG00000219294.6	+	processed_pseudogene	KNOWN	PIP5K1P1	1	1	0.176205
chr6	8013567	8064414	8038990	ENSG00000188428.17	-	protein_coding	KNOWN	BLOC1S5	5	6	-0.138820
chr6	8015726	8102530	8059128	ENSG00000265818.1	-	protein_coding	KNOWN	EEF1E1-BLOC1S5	1	7	-0.102264
chr6	8015810	8064376	8040093	ENSG00000282913.1	-	protein_coding	KNOWN	BLOC1S5	1	4	-0.136667
chr6	8073360	8102578	8087969	ENSG00000124802.11	-	protein_coding	KNOWN	EEF1E1	6	4	-0.101870
chr6	8329655	8342455	8336055	ENSG00000232234.2	+	lincRNA	KNOWN	RP11-203H2.1	1	2	-0.337801
chr6	8341937	8343021	8342479	ENSG00000234763.1	-	lincRNA	KNOWN	RP11-203H2.2	1	2	-0.328459
chr6	8413068	8435483	8424275	ENSG00000124786.9	-	protein_coding	KNOWN	SLC35B3	1	11	-0.018038
chr6	8652137	8653846	8652991	ENSG00000251164.1	+	lincRNA	KNOWN	HULC	1	2	-0.415410
chr6	8653558	8653797	8653677	ENSG00000276019.1	+	misc_RNA	NOVEL	HULC	1	1	-0.415410
chr6	8784178	8785445	8784811	ENSG00000230939.1	+	lincRNA	KNOWN	RP11-314C16.1	1	2	-0.480998
chr6	9124221	9161777	9142999	ENSG00000225775.1	-	lincRNA	KNOWN	RP11-354I10.1	1	3	-0.272119
chr6	9596110	10211608	9903859	ENSG00000181355.20	-	protein_coding	KNOWN	OFCC1	18	19	-0.267378
chr6	10118452	10119253	10118852	ENSG00000216368.2	+	processed_pseudogene	KNOWN	RP3-486D24.1	1	1	0.060456
chr6	10213881	10214362	10214121	ENSG00000229765.2	-	processed_pseudogene	KNOWN	RP11-339A7.1	1	1	-0.195171
chr6	10222036	10222161	10222098	ENSG00000221583.1	+	snRNA	KNOWN	RNU6ATAC21P	1	1	-0.195171
chr6	10312350	10312458	10312404	ENSG00000275271.1	+	miRNA	NOVEL	AL138885.1	1	1	-0.069759
chr6	10365593	10366582	10366087	ENSG00000216781.2	-	processed_pseudogene	KNOWN	RP1-290I10.2	1	2	0.417662
chr6	10393186	10419659	10406422	ENSG00000137203.10	-	protein_coding	KNOWN	TFAP2A	19	8	0.390071
chr6	10409340	10416446	10412893	ENSG00000229950.1	+	antisense	KNOWN	TFAP2A-AS1	2	3	0.579052
chr6	10423140	10426176	10424658	ENSG00000228478.1	-	lincRNA	KNOWN	RP1-290I10.3	1	3	0.611366
chr6	10429255	10434874	10432064	ENSG00000183674.11	-	lincRNA	KNOWN	LINC00518	5	4	0.302612
chr6	10434316	10456781	10445548	ENSG00000229401.1	+	lincRNA	KNOWN	MIR5689HG	2	4	0.163491
chr6	10439717	10439794	10439755	ENSG00000263705.1	+	miRNA	KNOWN	MIR5689	1	1	0.255491
chr6	10459906	10460541	10460223	ENSG00000238076.1	-	processed_pseudogene	KNOWN	MRPL48P1	1	1	-0.049254
chr6	10474500	10478502	10476501	ENSG00000231056.1	-	lincRNA	KNOWN	RP1-290I10.5	1	2	-0.214111
chr6	10492223	10629368	10560795	ENSG00000111846.15	+	protein_coding	KNOWN	GCNT2	17	5	-0.149236
chr6	10511036	10514546	10512791	ENSG00000237685.1	-	antisense	KNOWN	RP11-360O19.4	1	2	0.101578
chr6	10514282	10514973	10514627	ENSG00000216359.1	+	processed_pseudogene	KNOWN	RP11-360O19.1	1	1	0.101578
chr6	10574749	10575227	10574988	ENSG00000217181.1	-	processed_pseudogene	KNOWN	RP11-360O19.5	1	1	-0.137209
chr6	10633762	10634695	10634228	ENSG00000205318.5	+	processed_pseudogene	KNOWN	GCNT6	1	1	-0.442345
chr6	10671418	10694797	10683107	ENSG00000137434.11	-	protein_coding	KNOWN	C6orf52	6	6	-0.001067
chr6	10674658	10674768	10674713	ENSG00000201048.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.006310
chr6	10694695	10709782	10702238	ENSG00000111845.4	+	protein_coding	KNOWN	PAK1IP1	1	10	0.019235
chr6	10722915	10731129	10727022	ENSG00000111843.13	+	protein_coding	KNOWN	TMEM14C	5	6	-0.199390
chr6	10743324	10747663	10745493	ENSG00000272097.1	-	lincRNA	KNOWN	RP11-421M1.8	2	2	0.453590
chr6	10747759	10852753	10800256	ENSG00000137210.13	+	protein_coding	KNOWN	TMEM14B	20	7	0.014154
chr6	10747794	10930423	10839108	ENSG00000272162.1	+	protein_coding	KNOWN	RP11-637O19.3	1	19	-0.144091
chr6	10752791	10752926	10752858	ENSG00000222383.1	-	rRNA	KNOWN	RNA5SP203	1	1	-0.135419
chr6	10762723	10838555	10800639	ENSG00000111837.11	-	protein_coding	KNOWN	MAK	5	15	0.058319
chr6	10873223	10881941	10877582	ENSG00000124827.6	-	protein_coding	KNOWN	GCM2	1	5	-0.261187
chr6	10881780	10884349	10883064	ENSG00000235051.3	+	antisense	KNOWN	RP11-637O19.2	1	3	-0.261187
chr6	10886831	10979320	10933075	ENSG00000153157.12	+	protein_coding	KNOWN	SYCP2L	7	30	-0.493004
chr6	10980759	11044314	11012536	ENSG00000197977.3	-	protein_coding	KNOWN	ELOVL2	1	8	-0.369505
chr6	11015586	11015888	11015737	ENSG00000274541.1	+	processed_pseudogene	KNOWN	RP1-62D2.4	1	1	-0.540276
chr6	11043524	11078226	11060875	ENSG00000230314.6	+	antisense	KNOWN	ELOVL2-AS1	4	5	-0.112017
chr6	11094033	11138733	11116383	ENSG00000224531.5	+	protein_coding	KNOWN	SMIM13	2	3	-0.039538
chr6	11102489	11111732	11107110	ENSG00000244476.2	-	protein_coding	KNOWN	ERVFRD-1	2	2	0.015800
chr6	11154929	11155150	11155039	ENSG00000271245.1	-	processed_pseudogene	KNOWN	RP4-761I2.5	1	1	0.146099
chr6	11173452	11259099	11216275	ENSG00000247925.2	+	antisense	KNOWN	RP3-510L9.1	1	5	0.188306
chr6	11183298	11382348	11282823	ENSG00000111859.16	-	protein_coding	KNOWN	NEDD9	16	10	0.105320
chr6	11417350	11481239	11449294	ENSG00000233656.1	+	lincRNA	KNOWN	RP11-716O23.1	1	3	-0.193407
chr6	11487226	11515710	11501468	ENSG00000242753.1	+	lincRNA	KNOWN	RP11-716O23.2	1	5	-0.145389
chr6	11503509	11503671	11503590	ENSG00000202313.1	-	snRNA	KNOWN	RNU1-64P	1	1	-0.052780
chr6	11514192	11516466	11515329	ENSG00000218020.3	+	transcribed_processed_pseudogene	KNOWN	PRKRIRP5	1	1	-0.416349
chr6	11538278	11583524	11560901	ENSG00000205269.5	+	protein_coding	KNOWN	TMEM170B	1	3	-0.255345
chr6	11607552	11607981	11607766	ENSG00000271897.1	+	lincRNA	KNOWN	RP11-679B17.2	1	1	0.159106
chr6	11644067	11644343	11644205	ENSG00000277473.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.007779
chr6	11709819	11709960	11709889	ENSG00000207419.1	+	snoRNA	NOVEL	SNORA67	1	1	-0.366496
chr6	11712054	11807046	11759550	ENSG00000111863.12	-	protein_coding	KNOWN	ADTRP	10	7	0.209386
chr6	11810602	11811248	11810925	ENSG00000234427.1	+	lincRNA	KNOWN	RP3-413H6.2	1	2	-0.109642
chr6	11861626	11862970	11862298	ENSG00000215124.2	-	processed_pseudogene	KNOWN	AMD1P4	1	1	-0.034325
chr6	11990343	11992012	11991177	ENSG00000225102.1	-	antisense	KNOWN	RP11-456H18.1	1	2	-0.174523
chr6	12007670	12008856	12008263	ENSG00000229896.2	+	lincRNA	KNOWN	RP11-456H18.2	2	3	-0.174523
chr6	12008762	12164999	12086880	ENSG00000095951.16	+	protein_coding	KNOWN	HIVEP1	9	9	-0.100365
chr6	12290363	12297194	12293778	ENSG00000078401.6	+	protein_coding	KNOWN	EDN1	1	5	0.376088
chr6	12319453	12319592	12319522	ENSG00000218893.1	+	processed_pseudogene	KNOWN	SUMO2P12	1	1	0.169528
chr6	12406486	12406781	12406633	ENSG00000223321.1	-	misc_RNA	KNOWN	RN7SKP293	1	1	0.067330
chr6	12514110	12514724	12514417	ENSG00000212802.4	+	processed_pseudogene	KNOWN	RPL15P3	1	1	-0.184526
chr6	12582915	12585404	12584159	ENSG00000234015.1	-	lincRNA	KNOWN	RP11-125M16.1	1	2	-0.288151
chr6	12716805	13290484	13003644	ENSG00000112137.16	+	protein_coding	KNOWN	PHACTR1	11	15	-0.313226
chr6	12753675	12753771	12753723	ENSG00000223291.1	+	miRNA	NOVEL	AL354680.1	1	1	-0.908008
chr6	13214056	13214219	13214137	ENSG00000206702.1	+	snRNA	KNOWN	RNU1-11P	1	1	-0.175630
chr6	13264861	13295586	13280223	ENSG00000215022.7	-	antisense	KNOWN	RP1-257A7.4	4	5	0.003106
chr6	13266542	13328583	13297562	ENSG00000145979.17	-	protein_coding	KNOWN	TBC1D7	21	8	-0.021246
chr6	13290018	13290490	13290254	ENSG00000272379.1	-	lincRNA	KNOWN	RP1-257A7.5	1	1	0.091992
chr6	13357830	13487662	13422746	ENSG00000145990.10	-	protein_coding	KNOWN	GFOD1	6	2	0.228897
chr6	13486294	13486852	13486573	ENSG00000237786.1	+	antisense	KNOWN	GFOD1-AS1	1	2	0.124969
chr6	13521266	13522045	13521655	ENSG00000218265.1	+	processed_pseudogene	KNOWN	RPS4XP7	1	1	0.198907
chr6	13547704	13548013	13547858	ENSG00000202351.1	+	misc_RNA	KNOWN	RN7SKP204	1	1	0.014455
chr6	13574529	13615158	13594843	ENSG00000124523.14	+	protein_coding	KNOWN	SIRT5	6	10	-0.050281
chr6	13614111	13615155	13614633	ENSG00000261071.1	-	antisense	KNOWN	RP1-223E5.4	1	1	-0.166320
chr6	13615327	13632739	13624033	ENSG00000225921.6	+	protein_coding	KNOWN	NOL7	3	9	-0.180055
chr6	13621498	13711564	13666531	ENSG00000010017.12	-	protein_coding	KNOWN	RANBP9	2	14	-0.332991
chr6	13680080	13680141	13680110	ENSG00000280458.1	+	snRNA	NOVEL	U7	1	1	-0.534193
chr6	13786557	13814568	13800562	ENSG00000050393.11	-	protein_coding	KNOWN	MCUR1	3	10	0.018525
chr6	13825432	13826574	13826003	ENSG00000272209.1	+	lincRNA	KNOWN	RP3-500L14.2	1	1	0.127397
chr6	13924446	13980302	13952374	ENSG00000180537.12	+	protein_coding	KNOWN	RNF182	8	4	-0.335180
chr6	13949095	13949666	13949380	ENSG00000220868.2	+	processed_pseudogene	KNOWN	MRPL35P1	1	1	-0.082259
chr6	14004920	14006901	14005910	ENSG00000233981.1	+	lincRNA	KNOWN	RP3-380E11.2	1	2	-0.387405
chr6	14117256	14136918	14127087	ENSG00000112149.9	+	protein_coding	KNOWN	CD83	2	5	0.007319
chr6	14156462	14156523	14156492	ENSG00000238987.1	+	snRNA	KNOWN	RNU7-133P	1	1	0.124053
chr6	14229775	14231570	14230672	ENSG00000230631.1	-	lincRNA	KNOWN	RP11-359N11.1	1	2	-0.094727
chr6	14280127	14285454	14282790	ENSG00000226673.2	-	lincRNA	KNOWN	LINC01108	2	3	-0.027969
chr6	14391231	14393288	14392259	ENSG00000237346.1	-	lincRNA	KNOWN	RP3-448I9.2	1	4	-0.102656
chr6	14394326	14404289	14399307	ENSG00000234540.1	+	lincRNA	KNOWN	RP3-448I9.1	1	3	-0.102656
chr6	14597514	14599690	14598602	ENSG00000229646.2	-	lincRNA	KNOWN	RP11-330A16.1	1	2	0.000844
chr6	14646535	14646638	14646586	ENSG00000206960.1	+	snRNA	KNOWN	RNU6-793P	1	1	-0.108921
chr6	14661829	15090003	14875916	ENSG00000234261.3	-	lincRNA	KNOWN	RP11-146I2.1	2	4	0.016290
chr6	15102946	15104130	15103538	ENSG00000216754.2	-	processed_pseudogene	KNOWN	RP1-190J20.2	1	2	0.043357
chr6	15112968	15113221	15113094	ENSG00000242989.3	+	misc_RNA	KNOWN	RN7SL332P	1	1	0.171915
chr6	15149699	15149799	15149749	ENSG00000264687.1	-	miRNA	NOVEL	AL050335.1	1	1	0.091992
chr6	15243923	15245000	15244461	ENSG00000271888.1	-	lincRNA	KNOWN	RP11-560J1.2	1	1	0.008468
chr6	15246296	15522040	15384168	ENSG00000008083.13	+	protein_coding	KNOWN	JARID2	3	18	0.089288
chr6	15247815	15248634	15248224	ENSG00000235488.1	-	antisense	KNOWN	JARID2-AS1	1	2	0.008468
chr6	15314920	15315026	15314973	ENSG00000201367.1	+	snRNA	KNOWN	RNU6-522P	1	1	0.076395
chr6	15324367	15324472	15324419	ENSG00000201519.1	-	snRNA	KNOWN	RNU6-645P	1	1	0.076395
chr6	15522195	15522300	15522247	ENSG00000277411.1	-	rRNA	NOVEL	5S_rRNA	1	1	0.468140
chr6	15522801	15663058	15592929	ENSG00000047579.19	-	protein_coding	KNOWN	DTNBP1	12	11	-0.119117
chr6	15934782	15935315	15935048	ENSG00000214027.3	+	processed_pseudogene	KNOWN	ARPC3P5	1	1	-0.310891
chr6	15994944	15999797	15997370	ENSG00000232947.1	+	lincRNA	KNOWN	RP11-401E14.2	1	2	-0.500025
chr6	16041381	16041614	16041497	ENSG00000274212.1	-	processed_pseudogene	KNOWN	RP11-401E14.3	1	1	-0.539513
chr6	16107622	16108593	16108107	ENSG00000217585.1	+	processed_pseudogene	KNOWN	RP1-13D10.5	1	1	-0.372514
chr6	16129125	16148248	16138686	ENSG00000007944.14	+	protein_coding	KNOWN	MYLIP	2	7	-0.538839
chr6	16141556	16141624	16141590	ENSG00000263712.1	+	miRNA	KNOWN	MIR4639	1	1	-0.550456
chr6	16160926	16161411	16161168	ENSG00000218073.1	+	processed_pseudogene	KNOWN	RP1-13D10.2	1	1	-0.365690
chr6	16163377	16163762	16163569	ENSG00000217078.1	-	processed_pseudogene	KNOWN	RP1-13D10.3	1	1	-0.365690
chr6	16171606	16172031	16171818	ENSG00000216364.1	+	processed_pseudogene	KNOWN	MRPL42P2	1	1	-0.478097
chr6	16205014	16205120	16205067	ENSG00000251831.1	+	snRNA	KNOWN	RNU6-1114P	1	1	-0.193917
chr6	16232231	16232330	16232280	ENSG00000207193.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.007103
chr6	16238580	16295549	16267064	ENSG00000137198.9	+	protein_coding	KNOWN	GMPR	4	9	0.100146
chr6	16259101	16264553	16261827	ENSG00000282024.1	-	antisense	KNOWN	RP3-467D16.3	2	2	0.208637
chr6	16299112	16761491	16530301	ENSG00000124788.17	-	protein_coding	KNOWN	ATXN1	10	9	0.142208
chr6	16301693	16301824	16301758	ENSG00000281447.1	-	miRNA	NOVEL	AL009031.1	1	1	0.276732
chr6	16428444	16428523	16428483	ENSG00000265642.1	-	miRNA	NOVEL	AL034375.1	1	1	-0.013125
chr6	16761138	16762652	16761895	ENSG00000229931.1	+	antisense	KNOWN	RP1-151F17.1	2	3	-0.007544
chr6	16764346	16766883	16765614	ENSG00000272341.1	+	lincRNA	KNOWN	RP1-151F17.2	1	1	-0.007544
chr6	16897425	16897489	16897457	ENSG00000221492.2	+	miRNA	NOVEL	AL591610.1	1	1	0.174454
chr6	17054585	17054684	17054634	ENSG00000277100.1	+	miRNA	NOVEL	AL133405.1	1	1	-0.090662
chr6	17102258	17131372	17116815	ENSG00000230873.8	+	protein_coding	KNOWN	STMND1	3	5	0.099738
chr6	17281346	17293875	17287610	ENSG00000112183.14	+	protein_coding	KNOWN	RBM24	8	5	0.253032
chr6	17381367	17382120	17381743	ENSG00000219314.1	+	processed_pseudogene	KNOWN	RP1-273P12.1	1	1	-0.225349
chr6	17393216	17557792	17475504	ENSG00000112186.11	+	protein_coding	KNOWN	CAP2	9	13	0.176993
chr6	17530899	17531652	17531275	ENSG00000184612.8	-	processed_pseudogene	KNOWN	RPL7P26	1	1	0.091992
chr6	17582034	17582305	17582169	ENSG00000218359.1	+	processed_pseudogene	KNOWN	SUMO2P13	1	1	0.058044
chr6	17600355	17611719	17606037	ENSG00000137414.5	+	protein_coding	KNOWN	FAM8A1	1	5	0.162248
chr6	17615035	17706834	17660934	ENSG00000124789.11	-	protein_coding	KNOWN	NUP153	3	23	0.176401
chr6	17619533	17619634	17619583	ENSG00000206881.1	+	snRNA	KNOWN	RNU6-190P	1	1	0.249232
chr6	17706257	17707344	17706800	ENSG00000272269.1	+	antisense	KNOWN	RP11-500C11.3	1	1	0.266021
chr6	17721786	17721903	17721844	ENSG00000201415.1	-	rRNA	KNOWN	RNA5SP204	1	1	0.408019
chr6	17737458	17737556	17737507	ENSG00000201442.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.447257
chr6	17759183	17987623	17873403	ENSG00000137177.18	-	protein_coding	KNOWN	KIF13A	12	39	0.134581
chr6	17953572	17953930	17953751	ENSG00000220920.1	+	unprocessed_pseudogene	KNOWN	RP3-525L6.2	1	1	0.091992
chr6	18121419	18122606	18122012	ENSG00000187566.4	-	protein_coding	KNOWN	NHLRC1	1	1	-0.191801
chr6	18128311	18155074	18141692	ENSG00000137364.4	-	protein_coding	KNOWN	TPMT	1	9	0.209430
chr6	18155329	18223853	18189591	ENSG00000165097.13	+	protein_coding	KNOWN	KDM1B	3	18	-0.031629
chr6	18223868	18264823	18244345	ENSG00000124795.14	-	protein_coding	KNOWN	DEK	8	12	-0.129803
chr6	18273165	18273266	18273215	ENSG00000199715.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.026029
chr6	18304854	18305045	18304949	ENSG00000278102.1	-	processed_pseudogene	KNOWN	RP11-14J16.1	1	1	-0.061814
chr6	18306973	18307079	18307026	ENSG00000200681.1	-	snRNA	KNOWN	RNU6-263P	1	1	-0.061814
chr6	18363417	18365423	18364420	ENSG00000217414.2	-	processed_pseudogene	KNOWN	RP11-528A10.2	1	1	-0.475312
chr6	18366736	18368644	18367690	ENSG00000218976.2	-	unprocessed_pseudogene	KNOWN	RP11-528A10.1	1	3	-0.475312
chr6	18387350	18468874	18428112	ENSG00000137393.9	+	protein_coding	KNOWN	RNF144B	2	8	-0.207062
chr6	18571784	18571880	18571832	ENSG00000207775.1	+	miRNA	KNOWN	MIR548A1	1	1	-0.661990
chr6	19143695	19144160	19143927	ENSG00000217379.2	+	processed_pseudogene	KNOWN	RP11-254A17.1	1	1	-0.411899
chr6	19290319	19321021	19305670	ENSG00000231662.1	-	lincRNA	KNOWN	RP11-686D16.1	1	2	-0.552919
chr6	19348181	19349076	19348628	ENSG00000218643.2	+	processed_pseudogene	KNOWN	RPL5P20	1	1	-0.295669
chr6	19438283	19438418	19438350	ENSG00000201523.1	+	rRNA	KNOWN	RNA5SP205	1	1	-0.334541
chr6	19534944	19839080	19687012	ENSG00000226786.2	-	antisense	KNOWN	RP1-167F1.2	1	5	-0.311054
chr6	19612755	19614036	19613395	ENSG00000214012.4	+	processed_pseudogene	KNOWN	KRT18P38	1	1	-0.257342
chr6	19638040	19638808	19638424	ENSG00000217314.2	-	processed_pseudogene	KNOWN	UQCRFS1P3	1	2	-0.337516
chr6	19642425	19642529	19642477	ENSG00000200957.1	-	snRNA	KNOWN	RNU6-801P	1	1	-0.337516
chr6	19689825	19753113	19721469	ENSG00000237404.1	-	lincRNA	KNOWN	RP3-471C18.2	2	3	-0.272135
chr6	19730427	19734567	19732497	ENSG00000227116.1	-	lincRNA	KNOWN	RP3-471C18.1	1	2	-0.113123
chr6	19802164	19804752	19803458	ENSG00000228412.6	-	lincRNA	KNOWN	RP4-625H18.2	5	3	-0.210856
chr6	19837386	19840684	19839035	ENSG00000172201.10	+	protein_coding	KNOWN	ID4	2	7	-0.345072
chr6	20042455	20042940	20042697	ENSG00000229700.1	-	processed_pseudogene	KNOWN	RP1-130G2.1	1	1	-0.029314
chr6	20102145	20212399	20157272	ENSG00000172197.10	-	protein_coding	KNOWN	MBOAT1	1	13	-0.113714
chr6	20212087	20317739	20264913	ENSG00000227803.2	+	antisense	KNOWN	RP11-239H6.2	1	3	-0.190166
chr6	20401906	20493715	20447810	ENSG00000112242.14	+	protein_coding	KNOWN	E2F3	3	7	-0.059481
chr6	20421583	20421887	20421735	ENSG00000240869.3	-	misc_RNA	KNOWN	RN7SL128P	1	1	-0.043096
chr6	20421686	20421749	20421717	ENSG00000281428.1	-	miRNA	NOVEL	AL136303.2	1	1	-0.043096
chr6	20422318	20422401	20422359	ENSG00000252949.1	+	miRNA	NOVEL	AL136303.1	1	1	-0.043096
chr6	20437821	20440178	20438999	ENSG00000224707.1	+	sense_intronic	KNOWN	E2F3-IT1	1	2	-0.108921
chr6	20452369	20452473	20452421	ENSG00000222431.1	-	snRNA	KNOWN	RNU6-141P	1	1	-0.003933
chr6	20500175	20500276	20500225	ENSG00000201683.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.076725
chr6	20534457	21232404	20883430	ENSG00000145996.11	+	protein_coding	KNOWN	CDKAL1	4	16	-0.209004
chr6	20722328	20723655	20722991	ENSG00000225832.1	-	processed_pseudogene	KNOWN	RP3-348I23.3	1	2	-0.492971
chr6	20756103	20800694	20778398	ENSG00000233848.1	-	antisense	KNOWN	RP3-348I23.2	1	5	-0.133239
chr6	20993474	20993568	20993521	ENSG00000252046.1	-	snRNA	KNOWN	RNU6-150P	1	1	0.125159
chr6	21354411	21355296	21354853	ENSG00000227089.2	-	lincRNA	KNOWN	RP1-135L22.1	1	2	0.174454
chr6	21486061	21511895	21498978	ENSG00000280989.1	-	lincRNA	KNOWN	LINC00581	1	4	-0.408315
chr6	21522476	21523772	21523124	ENSG00000231754.1	-	lincRNA	KNOWN	RP11-204E9.1	1	2	-0.136949
chr6	21592769	21598619	21595694	ENSG00000124766.5	+	protein_coding	KNOWN	SOX4	1	1	-0.018332
chr6	21602128	21602383	21602255	ENSG00000220771.2	+	processed_pseudogene	KNOWN	BOLA2P3	1	1	-0.018332
chr6	21664772	22214505	21939638	ENSG00000272168.5	+	lincRNA	KNOWN	CASC15	6	12	-0.122495
chr6	21822536	21822737	21822636	ENSG00000280443.1	+	TEC	KNOWN	RP4-551N11.1	1	1	0.091992
chr6	22085544	22085918	22085731	ENSG00000222515.1	+	misc_RNA	KNOWN	RN7SKP240	1	1	0.074504
chr6	22134957	22147193	22141075	ENSG00000260455.1	-	lincRNA	KNOWN	NBAT1	1	3	-0.368426
chr6	22213306	22214237	22213771	ENSG00000219404.2	-	processed_pseudogene	KNOWN	RP11-524C21.1	1	2	-0.406997
chr6	22220781	22222395	22221588	ENSG00000261568.1	+	lincRNA	KNOWN	RP11-524C21.2	1	1	-0.406997
chr6	22260424	22317798	22289111	ENSG00000260049.1	+	antisense	KNOWN	RP3-404K8.2	1	4	-0.468476
chr6	22287244	22297501	22292372	ENSG00000172179.11	-	protein_coding	KNOWN	PRL	3	6	-0.365195
chr6	22569493	22571666	22570579	ENSG00000112273.6	+	protein_coding	KNOWN	HDGFL1	1	1	-0.636202
chr6	22589137	22593833	22591485	ENSG00000228772.2	-	lincRNA	KNOWN	RP1-309H15.2	1	3	-0.515584
chr6	22744395	23031780	22888087	ENSG00000233358.2	-	lincRNA	KNOWN	RP1-209A6.1	1	3	-0.341568
chr6	23102680	23103546	23103113	ENSG00000218476.2	+	processed_pseudogene	KNOWN	RP11-108N13.1	1	1	-0.515339
chr6	23124981	23125087	23125034	ENSG00000207394.1	-	snRNA	KNOWN	RNU6-1060P	1	1	-0.350526
chr6	23337711	23346560	23342135	ENSG00000235743.1	+	lincRNA	KNOWN	RP11-439H9.1	1	4	-0.617822
chr6	23649496	23649774	23649635	ENSG00000219453.1	+	processed_pseudogene	KNOWN	RP4-810F7.1	1	1	-0.690777
chr6	23854444	23855457	23854950	ENSG00000278128.1	+	processed_pseudogene	KNOWN	RP11-440J4.2	1	1	-0.582767
chr6	23856698	23856818	23856758	ENSG00000218512.2	-	processed_pseudogene	KNOWN	SPTLC1P2	1	1	-0.582767
chr6	23971879	23972941	23972410	ENSG00000220748.2	+	processed_pseudogene	KNOWN	RP1-59B16.1	1	1	-0.109642
chr6	24001824	24002433	24002128	ENSG00000219582.3	+	processed_pseudogene	KNOWN	HNRNPA1P58	1	1	-0.672079
chr6	24126122	24154900	24140511	ENSG00000152954.11	+	protein_coding	KNOWN	NRSN1	7	4	-0.258124
chr6	24166273	24166374	24166323	ENSG00000251830.1	+	snoRNA	NOVEL	SNORD46	1	1	-0.561142
chr6	24171756	24358052	24264904	ENSG00000146038.11	-	protein_coding	KNOWN	DCDC2	3	10	-0.385255
chr6	24356903	24358284	24357593	ENSG00000146049.1	+	protein_coding	KNOWN	KAAG1	1	1	-0.375614
chr6	24365651	24365754	24365702	ENSG00000202050.1	+	snRNA	KNOWN	RNU6-391P	1	1	-0.375614
chr6	24402908	24426194	24414551	ENSG00000124532.14	+	protein_coding	KNOWN	MRS2	6	12	-0.068438
chr6	24424565	24495205	24459885	ENSG00000112293.14	-	protein_coding	KNOWN	GPLD1	6	25	-0.110237
chr6	24494852	24537207	24516029	ENSG00000112294.12	+	protein_coding	KNOWN	ALDH5A1	5	11	-0.064304
chr6	24544104	24646155	24595129	ENSG00000137261.13	-	protein_coding	KNOWN	KIAA0319	6	22	-0.048025
chr6	24598012	24599790	24598901	ENSG00000218186.2	+	processed_pseudogene	KNOWN	KRT8P43	1	2	0.336530
chr6	24599052	24599184	24599118	ENSG00000280713.1	-	miRNA	NOVEL	AL512385.1	1	1	0.336530
chr6	24649977	24667033	24658505	ENSG00000111802.13	-	protein_coding	KNOWN	TDP2	5	7	-0.051940
chr6	24667035	24705065	24686050	ENSG00000112304.10	+	protein_coding	KNOWN	ACOT13	3	4	0.077037
chr6	24700907	24701793	24701350	ENSG00000272345.1	-	antisense	KNOWN	RP1-30M3.5	1	1	0.126343
chr6	24704861	24720836	24712848	ENSG00000112308.12	-	protein_coding	KNOWN	C6orf62	2	5	0.097300
chr6	24706747	24707151	24706949	ENSG00000272402.1	+	antisense	KNOWN	RP1-30M3.6	1	1	0.126343
chr6	24742302	24751921	24747111	ENSG00000224164.1	+	lincRNA	KNOWN	RP3-369A17.4	2	3	-0.010628
chr6	24750671	24751625	24751148	ENSG00000218806.2	-	processed_pseudogene	KNOWN	RP3-369A17.2	1	2	-0.125239
chr6	24774931	24786099	24780515	ENSG00000112312.9	+	protein_coding	KNOWN	GMNN	7	7	-0.041275
chr6	24797321	24798889	24798105	ENSG00000260286.3	-	protein_coding	KNOWN	C6orf229	1	2	-0.175941
chr6	24797373	24809798	24803585	ENSG00000282804.1	-	protein_coding	KNOWN	RP3-369A17.6	1	3	-0.175941
chr6	24804282	25042168	24923225	ENSG00000111913.15	-	protein_coding	KNOWN	FAM65B	9	23	0.129017
chr6	24839967	24840065	24840016	ENSG00000263391.1	-	miRNA	NOVEL	AL512428.1	1	1	0.339004
chr6	24947880	24948344	24948112	ENSG00000217083.1	+	processed_pseudogene	KNOWN	RP1-245M18.2	1	1	-0.103559
chr6	24976419	24976982	24976700	ENSG00000214975.4	+	processed_pseudogene	KNOWN	PPIAP29	1	2	-0.111542
chr6	25014952	25042170	25028561	ENSG00000272053.1	-	lincRNA	KNOWN	RP11-367G6.3	1	3	0.169316
chr6	25023247	25024483	25023865	ENSG00000220517.2	-	processed_pseudogene	KNOWN	ASS1P1	1	1	0.187340
chr6	25031009	25031287	25031148	ENSG00000244618.3	-	misc_RNA	KNOWN	RN7SL334P	1	1	0.147033
chr6	25041839	25056664	25049251	ENSG00000229313.1	+	antisense	KNOWN	RP3-425P12.5	1	3	0.036595
chr6	25053627	25057073	25055350	ENSG00000223623.1	-	lincRNA	KNOWN	RP3-425P12.1	1	4	-0.098614
chr6	25061625	25063507	25062566	ENSG00000230372.1	-	lincRNA	KNOWN	RP3-425P12.2	1	3	-0.098614
chr6	25081068	25166555	25123811	ENSG00000168405.14	-	unitary_pseudogene	KNOWN	CMAHP	8	14	0.029905
chr6	25140003	25141403	25140703	ENSG00000219682.4	+	processed_pseudogene	KNOWN	RP3-425P12.4	1	1	0.187675
chr6	25152547	25152883	25152715	ENSG00000262400.1	+	processed_pseudogene	KNOWN	RP11-191A15.1	1	1	0.246714
chr6	25181359	25181745	25181552	ENSG00000217805.2	+	processed_pseudogene	KNOWN	RP11-191A15.2	1	1	0.276075
chr6	25203253	25203340	25203296	ENSG00000264238.1	+	miRNA	NOVEL	AL590084.1	1	1	0.043898
chr6	25218688	25219069	25218878	ENSG00000219681.2	+	processed_pseudogene	KNOWN	RP11-191A15.4	1	1	-0.172655
chr6	25245356	25261411	25253383	ENSG00000235733.2	-	antisense	KNOWN	RP3-522P13.3	1	4	-0.184979
chr6	25248263	25248779	25248521	ENSG00000271108.1	+	processed_pseudogene	KNOWN	KATNBL1P5	1	1	-0.179813
chr6	25261239	25261731	25261485	ENSG00000216718.7	+	processed_pseudogene	KNOWN	RP3-522P13.1	1	1	-0.187081
chr6	25272200	25273751	25272975	ENSG00000213972.3	-	processed_pseudogene	KNOWN	RP3-522P13.2	1	3	-0.142064
chr6	25279078	25620530	25449804	ENSG00000079691.17	+	protein_coding	KNOWN	LRRC16A	5	37	0.037174
chr6	25287432	25287533	25287482	ENSG00000207286.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.142064
chr6	25326110	25326186	25326148	ENSG00000277593.1	+	miRNA	NOVEL	AL024509.1	1	1	0.017138
chr6	25383599	25383702	25383650	ENSG00000207490.1	+	snRNA	KNOWN	RNU6-987P	1	1	-0.073498
chr6	25407895	25407971	25407933	ENSG00000253017.1	+	miRNA	NOVEL	AL160037.1	1	1	-0.011386
chr6	25652201	25701783	25676992	ENSG00000079689.13	+	protein_coding	KNOWN	SCGN	3	11	-0.300540
chr6	25678769	25679164	25678966	ENSG00000217408.2	-	processed_pseudogene	KNOWN	PRELID1P2	1	1	-0.202456
chr6	25726132	25726527	25726329	ENSG00000164508.4	-	protein_coding	KNOWN	HIST1H2AA	1	1	-0.489179
chr6	25726909	25727292	25727100	ENSG00000146047.5	+	protein_coding	KNOWN	HIST1H2BA	1	1	-0.489179
chr6	25731782	25732091	25731936	ENSG00000178762.4	-	processed_pseudogene	KNOWN	HIST1H2BPS1	1	1	-0.251963
chr6	25732497	25732827	25732662	ENSG00000216436.2	+	processed_pseudogene	KNOWN	HIST1H2APS1	1	1	-0.251963
chr6	25732635	25732774	25732704	ENSG00000280964.1	-	miRNA	NOVEL	AL512384.1	1	1	-0.251963
chr6	25754699	25781191	25767945	ENSG00000146039.10	+	protein_coding	KNOWN	SLC17A4	3	13	-0.341772
chr6	25782897	25832059	25807478	ENSG00000124568.10	-	protein_coding	KNOWN	SLC17A1	4	13	-0.550666
chr6	25833066	25882286	25857676	ENSG00000124564.17	-	protein_coding	KNOWN	SLC17A3	10	13	-0.259569
chr6	25846628	25846728	25846678	ENSG00000276745.1	-	miRNA	NOVEL	AL138726.1	1	1	-0.275465
chr6	25882026	25882395	25882210	ENSG00000242387.1	-	transcribed_processed_pseudogene	KNOWN	HIST1H2APS2	1	1	-0.587608
chr6	25885419	25885751	25885585	ENSG00000277410.1	+	processed_pseudogene	KNOWN	RP1-139G21.4	1	1	-0.587608
chr6	25912754	25930726	25921740	ENSG00000112337.10	-	protein_coding	KNOWN	SLC17A2	3	12	-0.327053
chr6	25962802	25991226	25977014	ENSG00000112343.10	+	protein_coding	KNOWN	TRIM38	1	8	-0.055473
chr6	25983812	25999167	25991489	ENSG00000272558.1	-	antisense	KNOWN	U91328.21	1	2	0.053004
chr6	25992662	26001775	25997218	ENSG00000272462.2	+	lincRNA	KNOWN	U91328.19	1	2	0.069031
chr6	26013241	26013757	26013499	ENSG00000272810.1	+	lincRNA	KNOWN	U91328.22	1	1	0.009099
chr6	26016379	26016601	26016490	ENSG00000224447.1	+	unprocessed_pseudogene	KNOWN	HIST1H1PS2	1	1	0.009099
chr6	26017085	26017732	26017408	ENSG00000124610.4	-	protein_coding	KNOWN	HIST1H1A	1	1	0.009099
chr6	26020490	26020900	26020695	ENSG00000275714.1	+	protein_coding	KNOWN	HIST1H3A	1	1	0.009099
chr6	26021679	26021990	26021834	ENSG00000278637.1	+	protein_coding	KNOWN	HIST1H4A	1	1	0.009099
chr6	26026815	26027252	26027033	ENSG00000278705.1	-	protein_coding	KNOWN	HIST1H4B	1	1	0.009099
chr6	26031650	26032060	26031855	ENSG00000274267.1	-	protein_coding	KNOWN	HIST1H3B	1	1	-0.030214
chr6	26033176	26033568	26033372	ENSG00000278463.1	-	protein_coding	KNOWN	HIST1H2AB	1	1	-0.030214
chr6	26043227	26123904	26083565	ENSG00000276410.2	-	protein_coding	KNOWN	HIST1H2BB	2	2	0.215512
chr6	26043989	26044357	26044173	ENSG00000234816.2	+	unprocessed_pseudogene	KNOWN	U91328.2	1	1	-0.030214
chr6	26045411	26045821	26045616	ENSG00000278272.1	+	protein_coding	KNOWN	HIST1H3C	1	1	-0.030214
chr6	26055787	26056428	26056107	ENSG00000187837.3	-	protein_coding	KNOWN	HIST1H1C	1	1	0.384599
chr6	26087281	26098343	26092812	ENSG00000010704.18	+	protein_coding	KNOWN	HFE	14	7	0.340535
chr6	26103876	26104310	26104093	ENSG00000197061.4	+	protein_coding	KNOWN	HIST1H4C	1	1	0.449148
chr6	26107419	26108136	26107777	ENSG00000187475.5	-	protein_coding	KNOWN	HIST1H1T	1	1	0.449148
chr6	26114873	26123926	26119399	ENSG00000180596.7	-	protein_coding	KNOWN	HIST1H2BC	2	2	0.055696
chr6	26124145	26139116	26131630	ENSG00000180573.9	+	protein_coding	KNOWN	HIST1H2AC	3	2	0.449859
chr6	26124436	26124576	26124506	ENSG00000281052.1	-	miRNA	NOVEL	U91328.1	1	1	0.055696
chr6	26156354	26157107	26156730	ENSG00000168298.6	+	protein_coding	KNOWN	HIST1H1E	1	1	0.438723
chr6	26158146	26171349	26164747	ENSG00000158373.8	+	protein_coding	KNOWN	HIST1H2BD	2	2	0.425652
chr6	26160765	26172802	26166783	ENSG00000283064.1	-	antisense	KNOWN	RP1-221C16.8	1	3	0.408954
chr6	26164072	26164363	26164217	ENSG00000217159.2	+	processed_pseudogene	KNOWN	LARP1P1	1	1	0.438723
chr6	26172059	26184655	26178357	ENSG00000274290.2	+	protein_coding	KNOWN	HIST1H2BE	2	4	0.310887
chr6	26188765	26189076	26188920	ENSG00000277157.1	-	protein_coding	KNOWN	HIST1H4D	1	1	0.310887
chr6	26195566	26195771	26195668	ENSG00000216331.1	+	unprocessed_pseudogene	KNOWN	HIST1H1PS1	1	1	0.195943
chr6	26195595	26199293	26197444	ENSG00000282988.1	-	protein_coding	KNOWN	RP1-34B20.21	2	3	0.195943
chr6	26196840	26197250	26197045	ENSG00000197409.7	-	protein_coding	KNOWN	HIST1H3D	1	1	0.195943
chr6	26198851	26199243	26199047	ENSG00000196866.2	-	protein_coding	KNOWN	HIST1H2AD	1	1	0.195943
chr6	26198861	26198997	26198929	ENSG00000281823.1	+	miRNA	NOVEL	AL031777.2	1	1	0.195943
chr6	26199520	26200715	26200117	ENSG00000277224.2	+	protein_coding	KNOWN	HIST1H2BF	1	1	0.195943
chr6	26202156	26202654	26202405	ENSG00000217275.2	+	processed_pseudogene	KNOWN	RP1-34B20.4	1	1	0.195943
chr6	26204552	26206038	26205295	ENSG00000276966.2	+	protein_coding	KNOWN	HIST1H4E	1	1	0.195943
chr6	26215159	26216692	26215925	ENSG00000273802.2	-	protein_coding	KNOWN	HIST1H2BG	1	1	0.228808
chr6	26216975	26217483	26217229	ENSG00000277075.2	+	protein_coding	KNOWN	HIST1H2AE	1	1	0.228808
chr6	26217220	26217357	26217288	ENSG00000280547.1	-	miRNA	NOVEL	AL031777.1	1	1	0.228808
chr6	26219045	26219240	26219142	ENSG00000277720.1	+	unprocessed_pseudogene	KNOWN	RP1-34B20.19	1	1	0.228808
chr6	26224199	26227473	26225836	ENSG00000274750.2	+	protein_coding	KNOWN	HIST1H3E	2	2	0.228808
chr6	26233122	26233255	26233188	ENSG00000218281.1	+	unprocessed_pseudogene	KNOWN	HIST1H2APS3	1	1	0.235958
chr6	26234268	26234933	26234600	ENSG00000124575.6	-	protein_coding	KNOWN	HIST1H1D	1	1	0.235958
chr6	26240426	26240737	26240581	ENSG00000274618.1	+	protein_coding	KNOWN	HIST1H4F	1	1	0.235958
chr6	26246681	26246977	26246829	ENSG00000275663.1	-	protein_coding	KNOWN	HIST1H4G	1	1	0.235958
chr6	26250195	26250605	26250400	ENSG00000277775.1	-	protein_coding	KNOWN	HIST1H3F	1	1	0.451395
chr6	26251651	26253710	26252680	ENSG00000275713.2	+	protein_coding	KNOWN	HIST1H2BH	1	1	0.451395
chr6	26269405	26271815	26270610	ENSG00000273983.1	-	protein_coding	KNOWN	HIST1H3G	1	1	0.327308
chr6	26272021	26272701	26272361	ENSG00000218690.2	-	transcribed_unprocessed_pseudogene	KNOWN	HIST1H2APS4	2	1	0.286720
chr6	26272976	26273356	26273166	ENSG00000278588.1	+	protein_coding	KNOWN	HIST1H2BI	1	1	0.286720
chr6	26277609	26285638	26281623	ENSG00000158406.4	-	protein_coding	KNOWN	HIST1H4H	4	3	0.286720
chr6	26312572	26312685	26312628	ENSG00000281724.1	-	miRNA	NOVEL	AL021917.1	1	1	0.209828
chr6	26321876	26322292	26322084	ENSG00000220875.1	-	processed_pseudogene	KNOWN	HIST1H3PS1	1	1	0.209828
chr6	26365159	26378320	26371739	ENSG00000186470.13	+	protein_coding	KNOWN	BTN3A2	19	11	0.567669
chr6	26383096	26394874	26388985	ENSG00000124508.16	+	protein_coding	KNOWN	BTN2A2	16	8	0.577262
chr6	26402237	26415216	26408726	ENSG00000026950.16	+	protein_coding	KNOWN	BTN3A1	11	10	0.512933
chr6	26421391	26432383	26426887	ENSG00000124549.14	+	transcribed_unprocessed_pseudogene	KNOWN	BTN2A3P	5	7	0.538321
chr6	26440472	26453415	26446943	ENSG00000111801.15	+	protein_coding	KNOWN	BTN3A3	15	11	0.323529
chr6	26457904	26476621	26467262	ENSG00000112763.15	+	protein_coding	KNOWN	BTN2A1	7	9	0.473506
chr6	26501221	26510422	26505821	ENSG00000124557.12	+	protein_coding	KNOWN	BTN1A1	2	8	0.278516
chr6	26519351	26519458	26519404	ENSG00000199289.1	-	snRNA	KNOWN	RNU6-502P	1	1	0.235249
chr6	26523450	26526579	26525014	ENSG00000228223.2	+	lincRNA	KNOWN	HCG11	1	1	0.235249
chr6	26527063	26527404	26527233	ENSG00000261353.1	+	lincRNA	KNOWN	CTA-14H9.5	1	1	0.235249
chr6	26538405	26546254	26542329	ENSG00000182952.4	+	protein_coding	KNOWN	HMGN4	2	2	0.278143
chr6	26596952	26600744	26598848	ENSG00000146109.4	+	protein_coding	KNOWN	ABT1	1	3	0.184603
chr6	26602733	26606661	26604697	ENSG00000275846.1	+	lincRNA	KNOWN	RP11-457M11.7	2	2	0.184603
chr6	26611903	26613109	26612506	ENSG00000271071.1	-	processed_pseudogene	KNOWN	RP11-457M11.6	1	1	-0.124632
chr6	26634383	26659752	26647067	ENSG00000181315.10	-	protein_coding	KNOWN	ZNF322	8	5	-0.395630
chr6	26640702	26640781	26640741	ENSG00000281140.1	-	miRNA	NOVEL	AL513548.1	1	1	-0.465786
chr6	26686241	26687964	26687102	ENSG00000261584.1	+	lincRNA	KNOWN	RP11-457M11.5	1	1	-0.311364
chr6	26761897	26762029	26761963	ENSG00000281452.1	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.463971
chr6	26871484	26956554	26914019	ENSG00000241549.8	-	transcribed_unprocessed_pseudogene	KNOWN	GUSBP2	3	9	-0.107716
chr6	26896952	26898777	26897864	ENSG00000243307.2	+	processed_pseudogene	KNOWN	POM121L6P	1	1	0.078120
chr6	26956992	27023924	26990458	ENSG00000224843.6	+	lincRNA	KNOWN	LINC00240	4	3	-0.296910
chr6	27001208	27001648	27001428	ENSG00000272312.1	-	lincRNA	KNOWN	RP11-239L20.6	1	1	-0.317121
chr6	27020335	27020447	27020391	ENSG00000238621.1	+	miRNA	KNOWN	TRI-TAT2-2	1	1	-0.060907
chr6	27033435	27034310	27033872	ENSG00000220581.1	-	unitary_pseudogene	KNOWN	VN1R12P	1	1	-0.110995
chr6	27060365	27061249	27060807	ENSG00000216762.1	-	processed_pseudogene	KNOWN	VN1R13P	1	1	-0.407854
chr6	27083280	27084147	27083713	ENSG00000219770.1	+	unitary_pseudogene	KNOWN	VN1R11P	1	1	-0.527904
chr6	27109790	27109980	27109885	ENSG00000222800.1	-	snRNA	KNOWN	RNU2-62P	1	1	0.190172
chr6	27122657	27123221	27122939	ENSG00000272468.1	-	lincRNA	KNOWN	RP1-86C11.7	1	1	-0.525637
chr6	27125897	27132750	27129323	ENSG00000124635.8	-	protein_coding	KNOWN	HIST1H2BJ	3	2	-0.409752
chr6	27133042	27135291	27134166	ENSG00000196787.3	+	protein_coding	KNOWN	HIST1H2AG	1	1	-0.236957
chr6	27138588	27139881	27139234	ENSG00000276180.1	+	protein_coding	KNOWN	HIST1H4I	1	1	-0.236957
chr6	27146418	27146798	27146608	ENSG00000197903.7	-	protein_coding	KNOWN	HIST1H2BK	1	1	-0.236957
chr6	27147129	27147515	27147322	ENSG00000274997.1	+	protein_coding	KNOWN	HIST1H2AH	1	1	-0.236957
chr6	27147375	27147516	27147445	ENSG00000280696.1	-	miRNA	NOVEL	AL021807.1	1	1	-0.236957
chr6	27147626	27147688	27147657	ENSG00000265565.1	+	miRNA	KNOWN	MIR3143	1	1	-0.236957
chr6	27211244	27211913	27211578	ENSG00000174572.3	+	processed_pseudogene	KNOWN	RP11-209A2.1	1	1	-0.231898
chr6	27247701	27256624	27252162	ENSG00000112812.15	+	protein_coding	KNOWN	PRSS16	20	12	0.129141
chr6	27268113	27269229	27268671	ENSG00000270935.1	+	processed_pseudogene	KNOWN	XXbac-BPGBPG24O18.1	1	1	0.203023
chr6	27285903	27312170	27299036	ENSG00000158553.4	-	protein_coding	KNOWN	POM121L2	2	2	0.009377
chr6	27324894	27325768	27325331	ENSG00000220758.4	+	unprocessed_pseudogene	KNOWN	VN1R10P	1	1	-0.405508
chr6	27357825	27360221	27359023	ENSG00000204789.4	-	processed_pseudogene	KNOWN	ZNF204P	1	1	-0.461162
chr6	27374615	27403904	27389259	ENSG00000124613.8	+	protein_coding	KNOWN	ZNF391	4	4	-0.133147
chr6	27404010	27406964	27405487	ENSG00000271755.1	-	lincRNA	KNOWN	RP1-153G14.4	1	1	-0.094971
chr6	27407697	27407996	27407846	ENSG00000237154.2	+	processed_pseudogene	KNOWN	MCFD2P1	1	1	-0.094971
chr6	27450743	27473118	27461930	ENSG00000096654.15	-	protein_coding	KNOWN	ZNF184	2	6	-0.017140
chr6	27495813	27495929	27495871	ENSG00000280950.1	+	miRNA	NOVEL	AL021918.2	1	1	-0.342809
chr6	27510501	27510694	27510597	ENSG00000278332.1	+	processed_pseudogene	KNOWN	XXbac-BPGBPG34I8.2	1	1	0.037836
chr6	27515039	27515274	27515156	ENSG00000270666.1	-	processed_pseudogene	KNOWN	XXbac-BPGBPG34I8.1	1	1	0.037836
chr6	27523076	27524339	27523707	ENSG00000218347.2	+	processed_pseudogene	KNOWN	HNRNPA1P1	1	2	0.037836
chr6	27545669	27545777	27545723	ENSG00000280871.1	+	miRNA	NOVEL	AL021918.1	1	1	-0.372971
chr6	27560822	27561744	27561283	ENSG00000219738.2	-	processed_pseudogene	KNOWN	XXbac-BPG34I8.3	1	2	-0.163005
chr6	27596412	27596517	27596464	ENSG00000206671.1	+	snRNA	KNOWN	RNU6-471P	1	1	0.155417
chr6	27631409	27631532	27631470	ENSG00000238648.1	+	miRNA	KNOWN	TRI-TAT2-3	1	1	-0.022778
chr6	27652602	27652825	27652713	ENSG00000216676.2	-	processed_pseudogene	KNOWN	RP1-15D7.1	1	1	0.062448
chr6	27666481	27666589	27666535	ENSG00000276793.1	+	miRNA	NOVEL	AL031229.1	1	1	0.062448
chr6	27694035	27710222	27702128	ENSG00000281706.2	+	lincRNA	KNOWN	LINC01012	4	4	-0.020501
chr6	27737000	27738494	27737747	ENSG00000216915.2	-	processed_pseudogene	KNOWN	RP1-97D16.1	1	1	-0.264801
chr6	27780619	27781111	27780865	ENSG00000218069.2	-	processed_pseudogene	KNOWN	RSL24D1P1	1	1	0.285716
chr6	27807075	27807339	27807207	ENSG00000217862.2	+	processed_pseudogene	KNOWN	HIST1H4PS1	1	1	-0.095868
chr6	27807444	27807931	27807687	ENSG00000185130.5	-	protein_coding	KNOWN	HIST1H2BL	1	1	-0.095868
chr6	27808199	27808701	27808450	ENSG00000196747.4	+	protein_coding	KNOWN	HIST1H2AI	1	1	-0.095868
chr6	27808413	27808553	27808483	ENSG00000281258.1	-	miRNA	NOVEL	AL009179.1	1	1	-0.095868
chr6	27810064	27811300	27810682	ENSG00000278828.1	+	protein_coding	KNOWN	HIST1H3H	1	1	0.107099
chr6	27814354	27814740	27814547	ENSG00000276368.1	-	protein_coding	KNOWN	HIST1H2AJ	1	1	0.107099
chr6	27814397	27814537	27814467	ENSG00000280826.1	+	miRNA	NOVEL	AL049822.1	1	1	0.107099
chr6	27815044	27815424	27815234	ENSG00000273703.1	+	protein_coding	KNOWN	HIST1H2BM	1	1	0.107099
chr6	27824108	27824480	27824294	ENSG00000197238.4	+	protein_coding	KNOWN	HIST1H4J	1	1	0.107099
chr6	27831216	27831527	27831371	ENSG00000273542.1	-	protein_coding	KNOWN	HIST1H4K	1	1	0.543501
chr6	27837760	27865798	27851779	ENSG00000233822.4	+	protein_coding	KNOWN	HIST1H2BN	4	3	0.311855
chr6	27837947	27838339	27838143	ENSG00000275221.1	-	protein_coding	KNOWN	HIST1H2AK	1	1	0.543501
chr6	27837957	27838094	27838025	ENSG00000281435.1	+	miRNA	NOVEL	Z98744.1	1	1	0.543501
chr6	27864062	27864401	27864231	ENSG00000217646.1	-	processed_pseudogene	KNOWN	HIST1H2BPS2	1	1	0.132406
chr6	27865355	27865747	27865551	ENSG00000276903.1	+	protein_coding	KNOWN	HIST1H2AL	1	1	0.132406
chr6	27865600	27865738	27865669	ENSG00000281512.1	-	miRNA	NOVEL	Z98744.2	1	1	0.132406
chr6	27866849	27867529	27867189	ENSG00000184357.4	-	protein_coding	KNOWN	HIST1H1B	1	1	0.132406
chr6	27871905	27872315	27872110	ENSG00000275379.1	-	protein_coding	KNOWN	HIST1H3I	1	1	0.321193
chr6	27873199	27873510	27873354	ENSG00000275126.1	-	protein_coding	KNOWN	HIST1H4L	1	1	0.321193
chr6	27890382	27893106	27891744	ENSG00000197153.4	-	protein_coding	KNOWN	HIST1H3J	2	2	0.400114
chr6	27892757	27893149	27892953	ENSG00000278677.1	-	protein_coding	KNOWN	HIST1H2AM	1	1	0.400114
chr6	27892767	27892904	27892835	ENSG00000281851.1	+	miRNA	NOVEL	Z98744.3	1	1	0.400114
chr6	27893463	27893843	27893653	ENSG00000274641.1	+	protein_coding	KNOWN	HIST1H2BO	1	1	0.400114
chr6	27897504	27897566	27897535	ENSG00000238610.1	-	snRNA	KNOWN	RNU7-26P	1	1	0.400114
chr6	27911185	27912396	27911790	ENSG00000168131.4	-	protein_coding	KNOWN	OR2B2	1	1	-0.370351
chr6	27937465	27938403	27937934	ENSG00000168126.3	+	unprocessed_pseudogene	KNOWN	OR2W6P	1	1	-0.695014
chr6	27957241	27958182	27957711	ENSG00000124657.1	+	protein_coding	KNOWN	OR2B6	1	1	-0.841666
chr6	27965175	27965514	27965344	ENSG00000214374.2	+	processed_pseudogene	KNOWN	RPLP2P1	1	1	-0.841666
chr6	27977150	27978075	27977612	ENSG00000216629.1	+	unprocessed_pseudogene	KNOWN	OR2W4P	1	1	-0.371664
chr6	28010723	28012355	28011539	ENSG00000217539.2	+	processed_pseudogene	KNOWN	IQCB2P	1	1	-0.412313
chr6	28015568	28015777	28015672	ENSG00000199851.2	+	snoRNA	NOVEL	U3	1	1	-0.412313
chr6	28033947	28034855	28034401	ENSG00000217315.1	+	unprocessed_pseudogene	KNOWN	OR2W2P	1	1	-0.737208
chr6	28046434	28047367	28046900	ENSG00000187763.3	+	unprocessed_pseudogene	KNOWN	OR2B7P	1	1	-0.737208
chr6	28053228	28054165	28053696	ENSG00000182477.5	-	unprocessed_pseudogene	KNOWN	OR2B8P	1	1	-0.035243
chr6	28073316	28074233	28073774	ENSG00000220721.1	+	unprocessed_pseudogene	KNOWN	OR1F12	1	1	-0.197515
chr6	28078792	28081130	28079961	ENSG00000272009.1	-	antisense	KNOWN	RP1-313I6.12	1	2	-0.197515
chr6	28080975	28089563	28085269	ENSG00000197279.3	+	protein_coding	KNOWN	ZNF165	1	4	-0.197515
chr6	28091154	28093664	28092409	ENSG00000219891.2	+	transcribed_unprocessed_pseudogene	KNOWN	ZSCAN12P1	2	2	-0.118368
chr6	28115628	28116551	28116089	ENSG00000219392.1	+	unprocessed_pseudogene	KNOWN	RP1-265C24.5	1	1	-0.042494
chr6	28121795	28137293	28129544	ENSG00000269293.2	-	antisense	KNOWN	ZSCAN16-AS1	2	3	0.106272
chr6	28124560	28130082	28127321	ENSG00000196812.4	+	protein_coding	KNOWN	ZSCAN16	1	4	-0.037743
chr6	28136849	28139678	28138263	ENSG00000261839.1	+	lincRNA	KNOWN	RP1-265C24.8	1	1	0.273599
chr6	28141910	28159472	28150691	ENSG00000198315.10	+	protein_coding	KNOWN	ZKSCAN8	4	7	0.045639
chr6	28161781	28169594	28165687	ENSG00000226314.7	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF192P1	5	5	-0.149016
chr6	28170845	28172521	28171683	ENSG00000280107.1	+	TEC	KNOWN	AL022393.9	1	1	-0.136485
chr6	28176188	28176674	28176431	ENSG00000216901.1	+	unprocessed_pseudogene	KNOWN	AL022393.7	1	1	-0.136485
chr6	28188050	28189432	28188741	ENSG00000218016.2	+	unprocessed_pseudogene	KNOWN	ZNF192P2	1	1	-0.136485
chr6	28217643	28218634	28218138	ENSG00000176933.5	-	processed_pseudogene	KNOWN	TOB2P1	1	1	0.148948
chr6	28224886	28233482	28229184	ENSG00000137185.11	+	protein_coding	KNOWN	ZSCAN9	8	5	0.115934
chr6	28244623	28252224	28248423	ENSG00000187626.8	-	protein_coding	KNOWN	ZKSCAN4	1	5	0.109001
chr6	28259320	28260958	28260139	ENSG00000189134.3	+	protein_coding	KNOWN	NKAPL	1	1	0.209349
chr6	28267010	28278224	28272617	ENSG00000197062.11	+	protein_coding	KNOWN	ZSCAN26	7	4	0.027555
chr6	28267121	28281580	28274350	ENSG00000276302.1	+	protein_coding	KNOWN	RP5-874C20.8	1	4	0.010825
chr6	28281572	28302549	28292060	ENSG00000137338.5	+	protein_coding	KNOWN	PGBD1	1	7	0.003053
chr6	28315613	28315883	28315748	ENSG00000273712.1	-	processed_pseudogene	KNOWN	RP5-874C20.7	1	1	0.030216
chr6	28319660	28319852	28319756	ENSG00000270326.1	-	processed_pseudogene	KNOWN	RP5-874C20.6	1	1	0.030216
chr6	28324693	28356271	28340482	ENSG00000235109.7	-	protein_coding	KNOWN	ZSCAN31	19	8	-0.214119
chr6	28349914	28369177	28359545	ENSG00000189298.13	+	protein_coding	KNOWN	ZKSCAN3	3	7	-0.046775
chr6	28378955	28399734	28389344	ENSG00000158691.14	-	protein_coding	KNOWN	ZSCAN12	2	6	0.144054
chr6	28410270	28410456	28410363	ENSG00000251877.1	+	snRNA	KNOWN	RNU2-45P	1	1	-0.503618
chr6	28431930	28443502	28437716	ENSG00000187987.9	-	protein_coding	KNOWN	ZSCAN23	3	4	0.219747
chr6	28446973	28447807	28447390	ENSG00000231162.4	+	processed_pseudogene	KNOWN	COX11P1	1	1	0.219747
chr6	28455648	28456141	28455894	ENSG00000219262.1	-	unprocessed_pseudogene	KNOWN	OR2E1P	1	1	0.054517
chr6	28503296	28528215	28515755	ENSG00000198704.9	-	protein_coding	KNOWN	GPX6	4	6	0.016100
chr6	28525925	28534952	28530438	ENSG00000224586.6	+	protein_coding	KNOWN	GPX5	4	6	-0.076091
chr6	28571630	28616212	28593921	ENSG00000232040.2	-	protein_coding	KNOWN	ZBED9	4	5	-0.037702
chr6	28587378	28591747	28589562	ENSG00000246350.1	+	antisense	KNOWN	RP5-1186N24.3	1	2	-0.054341
chr6	28633381	28633594	28633487	ENSG00000271440.1	-	processed_pseudogene	KNOWN	RP11-373N24.2	1	1	-0.145047
chr6	28648286	28649066	28648676	ENSG00000235570.1	-	lincRNA	KNOWN	LINC00533	1	2	-0.145047
chr6	28658234	28658317	28658275	ENSG00000265764.2	-	miRNA	NOVEL	AL121932.1	1	1	0.328432
chr6	28732017	28732904	28732460	ENSG00000237425.1	+	processed_pseudogene	KNOWN	RPSAP2	1	1	-0.051974
chr6	28783633	28784004	28783818	ENSG00000235559.1	-	processed_pseudogene	KNOWN	NOP56P1	1	1	0.173063
chr6	28837869	28839006	28838437	ENSG00000225173.1	-	lincRNA	KNOWN	XXbac-BPG308K3.5	1	2	0.117377
chr6	28859625	28864630	28862127	ENSG00000225595.2	-	lincRNA	KNOWN	LINC01623	3	2	-0.048186
chr6	28861416	28862047	28861731	ENSG00000213916.2	+	processed_pseudogene	KNOWN	RPL13P	1	1	-0.048186
chr6	28888832	28889906	28889369	ENSG00000233366.1	-	processed_pseudogene	KNOWN	ZNF90P2	1	1	0.091992
chr6	28896530	28897322	28896926	ENSG00000224157.1	+	antisense	KNOWN	HCG14	1	2	0.109065
chr6	28903002	28923989	28913495	ENSG00000204713.10	-	protein_coding	KNOWN	TRIM27	7	9	0.172940
chr6	28915645	28915744	28915694	ENSG00000212240.1	+	snRNA	KNOWN	RNU6-930P	1	1	0.204886
chr6	28943877	28944537	28944207	ENSG00000204709.4	+	lincRNA	KNOWN	LINC01556	1	2	0.372620
chr6	28969130	28970460	28969795	ENSG00000228666.1	-	processed_pseudogene	KNOWN	KRT18P1	1	1	0.221239
chr6	28977475	28977773	28977624	ENSG00000263426.2	+	misc_RNA	KNOWN	RN7SL471P	1	1	0.117229
chr6	28977613	28977709	28977661	ENSG00000280628.1	+	miRNA	NOVEL	AL662791.1	1	1	0.117229
chr6	28986203	28987484	28986843	ENSG00000227214.2	+	antisense	KNOWN	HCG15	1	3	0.117229
chr6	28986800	28988536	28987668	ENSG00000244349.1	+	antisense	KNOWN	HCG16	1	2	0.117229
chr6	28994785	29005316	29000050	ENSG00000197935.6	-	protein_coding	KNOWN	ZNF311	2	7	0.452582
chr6	29026680	29027607	29027143	ENSG00000223677.1	-	unprocessed_pseudogene	KNOWN	OR2AD1P	1	1	-0.171043
chr6	29036021	29076524	29056272	ENSG00000277661.4	+	antisense	KNOWN	XXbac-BPG258E24.10	3	4	-0.275808
chr6	29044213	29045240	29044726	ENSG00000204704.2	-	protein_coding	KNOWN	OR2W1	1	1	-0.134779
chr6	29071824	29072599	29072211	ENSG00000236909.1	-	unprocessed_pseudogene	KNOWN	OR2P1P	1	1	-0.069472
chr6	29076573	29077168	29076870	ENSG00000228364.1	-	processed_pseudogene	NOVEL	SAR1P1	1	1	-0.069472
chr6	29086307	29087313	29086810	ENSG00000204703.4	-	protein_coding	KNOWN	OR2B3	1	1	-0.069472
chr6	29100609	29101881	29101245	ENSG00000204702.4	+	polymorphic_pseudogene	KNOWN	OR2J1	1	1	-0.388001
chr6	29111891	29112826	29112358	ENSG00000204701.1	+	protein_coding	KNOWN	OR2J3	1	1	-0.356282
chr6	29124210	29128908	29126559	ENSG00000227206.1	+	lincRNA	KNOWN	XXbac-BCX196D17.5	1	2	-0.356282
chr6	29137880	29138816	29138348	ENSG00000203492.3	-	unprocessed_pseudogene	KNOWN	OR2N1P	1	1	-0.398536
chr6	29173303	29174574	29173938	ENSG00000204700.4	+	protein_coding	KNOWN	OR2J2	1	1	-0.514997
chr6	29181510	29182445	29181977	ENSG00000224233.1	+	unprocessed_pseudogene	KNOWN	OR2J4P	1	1	-0.514997
chr6	29201768	29201834	29201801	ENSG00000273960.1	+	miRNA	NOVEL	AL645937.1	1	1	-0.520083
chr6	29215236	29216179	29215707	ENSG00000230598.1	+	unprocessed_pseudogene	KNOWN	OR2H4P	1	1	-0.343224
chr6	29223973	29290440	29257206	ENSG00000232505.2	+	lincRNA	KNOWN	XXbac-BPG308J9.3	2	3	-0.279276
chr6	29229227	29230157	29229692	ENSG00000213911.2	-	unprocessed_pseudogene	KNOWN	OR2G1P	1	1	-0.349389
chr6	29262703	29264079	29263391	ENSG00000204697.3	-	unprocessed_pseudogene	KNOWN	OR2U1P	1	2	-0.154364
chr6	29268462	29269421	29268941	ENSG00000242524.1	-	unprocessed_pseudogene	KNOWN	OR2U2P	1	1	-0.154364
chr6	29290711	29291653	29291182	ENSG00000197171.5	+	unprocessed_pseudogene	KNOWN	OR2B4P	1	1	-0.556536
chr6	29306690	29307655	29307172	ENSG00000204695.3	+	protein_coding	KNOWN	OR14J1	1	1	-0.556536
chr6	29329626	29331061	29330343	ENSG00000230056.1	-	processed_pseudogene	KNOWN	DDX6P1	1	1	-0.539939
chr6	29355230	29431967	29393598	ENSG00000243729.3	-	protein_coding	KNOWN	OR5V1	2	4	-0.222238
chr6	29373423	29375291	29374357	ENSG00000112462.8	-	protein_coding	KNOWN	OR12D3	1	1	-0.488201
chr6	29396555	29397671	29397113	ENSG00000280236.1	+	polymorphic_pseudogene	KNOWN	OR12D2	2	1	-0.188116
chr6	29396700	29397623	29397161	ENSG00000168787.6	+	protein_coding	KNOWN	OR12D2	1	1	-0.188116
chr6	29417280	29418226	29417753	ENSG00000251608.1	+	polymorphic_pseudogene	KNOWN	OR12D1	1	1	0.111101
chr6	29425504	29457071	29441287	ENSG00000204694.10	-	protein_coding	KNOWN	OR11A1	3	5	-0.321494
chr6	29439306	29440977	29440141	ENSG00000206474.7	+	polymorphic_pseudogene	KNOWN	OR10C1	2	1	-0.497220
chr6	29440016	29440954	29440485	ENSG00000279941.1	+	protein_coding	KNOWN	OR10C1	1	1	-0.497220
chr6	29450210	29450558	29450384	ENSG00000277881.1	+	processed_pseudogene	KNOWN	XXbac-BPG13B8.11	1	1	-0.099489
chr6	29457181	29464328	29460754	ENSG00000204688.9	+	protein_coding	KNOWN	OR2H1	7	4	-0.099489
chr6	29464596	29469806	29467201	ENSG00000225797.2	-	unprocessed_pseudogene	KNOWN	UBDP1	1	2	-0.099489
chr6	29475025	29476071	29475548	ENSG00000230164.1	-	unprocessed_pseudogene	KNOWN	MAS1LP1	1	1	-0.032099
chr6	29486697	29487956	29487326	ENSG00000204687.4	-	protein_coding	KNOWN	MAS1L	1	1	-0.032099
chr6	29489271	29489676	29489473	ENSG00000213900.2	-	processed_pseudogene	KNOWN	RPS17P1	1	1	-0.032099
chr6	29497509	29510556	29504032	ENSG00000229274.1	+	lincRNA	KNOWN	XXbac-BPG13B8.10	1	4	-0.057782
chr6	29529420	29533665	29531542	ENSG00000224582.5	+	antisense	KNOWN	LINC01015	2	4	0.168124
chr6	29537704	29538787	29538245	ENSG00000229281.1	-	unprocessed_pseudogene	KNOWN	GPR53P	1	1	0.156481
chr6	29553219	29554166	29553692	ENSG00000237988.3	+	unprocessed_pseudogene	KNOWN	OR2I1P	1	1	0.174454
chr6	29555515	29559925	29557720	ENSG00000213886.3	-	protein_coding	KNOWN	UBD	1	2	0.174454
chr6	29555629	29633976	29594802	ENSG00000204681.10	-	protein_coding	KNOWN	GABBR1	20	23	0.047706
chr6	29573909	29574836	29574372	ENSG00000232173.2	+	unprocessed_pseudogene	KNOWN	OR2H5P	1	1	-0.378638
chr6	29577459	29577748	29577603	ENSG00000227609.2	+	processed_pseudogene	KNOWN	TMEM183AP1	1	1	-0.378638
chr6	29582249	29582332	29582290	ENSG00000201330.1	+	snoRNA	KNOWN	SNORD32B	1	1	-0.378638
chr6	29582508	29583025	29582766	ENSG00000231301.1	+	processed_pseudogene	KNOWN	RPL13AP	1	1	-0.378638
chr6	29587455	29589038	29588246	ENSG00000204657.3	+	protein_coding	KNOWN	OR2H2	1	1	-0.378638
chr6	29636060	29636343	29636201	ENSG00000235238.1	-	processed_pseudogene	KNOWN	SUMO2P1	1	1	0.469839
chr6	29656981	29672372	29664676	ENSG00000204655.11	+	protein_coding	KNOWN	MOG	19	8	0.191897
chr6	29672392	29681110	29676751	ENSG00000204644.9	-	protein_coding	KNOWN	ZFP57	3	6	0.323317
chr6	29708125	29708547	29708336	ENSG00000233916.1	-	processed_pseudogene	KNOWN	ZDHHC20P1	1	1	0.281334
chr6	29722775	29738528	29730651	ENSG00000204642.13	+	protein_coding	KNOWN	HLA-F	15	8	0.242532
chr6	29722981	29723971	29723476	ENSG00000225864.1	-	unprocessed_pseudogene	KNOWN	HCG4P11	1	1	0.188954
chr6	29726601	29749049	29737825	ENSG00000214922.9	-	processed_transcript	KNOWN	HLA-F-AS1	3	6	0.272933
chr6	29726669	29727139	29726904	ENSG00000239257.1	-	transcribed_processed_pseudogene	KNOWN	RPL23AP1	1	1	0.188954
chr6	29741731	29748969	29745350	ENSG00000273340.1	-	transcribed_unprocessed_pseudogene	KNOWN	MICE	1	6	0.287912
chr6	29748289	29748513	29748401	ENSG00000227758.1	+	unprocessed_pseudogene	KNOWN	HCG9P5	1	1	0.287912
chr6	29750371	29750472	29750421	ENSG00000199290.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.498762
chr6	29750729	29751148	29750938	ENSG00000235821.1	-	processed_pseudogene	KNOWN	IFITM4P	1	1	0.498762
chr6	29751965	29752207	29752086	ENSG00000272236.1	-	lincRNA	KNOWN	XXbac-BPG170G13.32	1	1	0.498762
chr6	29763258	29763392	29763325	ENSG00000270896.1	-	processed_pseudogene	KNOWN	XXbac-BPG170G13.31	1	1	0.498762
chr6	29790954	29797811	29794382	ENSG00000181126.13	+	transcribed_unprocessed_pseudogene	KNOWN	HLA-V	4	4	0.324826
chr6	29791753	29792750	29792251	ENSG00000176998.4	-	unprocessed_pseudogene	KNOWN	HCG4	1	1	0.324826
chr6	29800415	29802425	29801420	ENSG00000261548.1	+	unprocessed_pseudogene	KNOWN	HLA-P	1	5	0.324826
chr6	29803195	29803991	29803593	ENSG00000213880.3	-	processed_pseudogene	KNOWN	RPL7AP7	1	1	0.324826
chr6	29812565	29812696	29812630	ENSG00000237042.1	-	unprocessed_pseudogene	KNOWN	MICG	1	1	0.391110
chr6	29826967	29831125	29829046	ENSG00000204632.11	+	protein_coding	KNOWN	HLA-G	7	8	0.399188
chr6	29827385	29828364	29827874	ENSG00000229142.1	-	unprocessed_pseudogene	KNOWN	HCG4P8	1	1	0.391110
chr6	29852363	29852491	29852427	ENSG00000233265.1	-	unprocessed_pseudogene	KNOWN	MICF	1	1	0.159896
chr6	29871895	29873783	29872839	ENSG00000281831.1	-	lincRNA	KNOWN	HCP5B	1	1	0.222191
chr6	29887294	29888268	29887781	ENSG00000230521.1	-	unprocessed_pseudogene	KNOWN	HCG4P7	1	1	0.222191
chr6	29887752	29890482	29889117	ENSG00000206341.7	+	unprocessed_pseudogene	KNOWN	HLA-H	1	7	0.281591
chr6	29896654	29897786	29897220	ENSG00000231130.1	+	unprocessed_pseudogene	KNOWN	HLA-T	1	4	0.557930
chr6	29906543	29906909	29906726	ENSG00000233677.1	+	unprocessed_pseudogene	KNOWN	DDX39BP1	1	2	0.557930
chr6	29907783	29908645	29908214	ENSG00000235963.1	-	unprocessed_pseudogene	KNOWN	MCCD1P1	1	2	0.557930
chr6	29925983	29926973	29926478	ENSG00000227262.3	-	unprocessed_pseudogene	KNOWN	HCG4B	1	1	0.484693
chr6	29926459	29929232	29927845	ENSG00000230795.3	+	unprocessed_pseudogene	KNOWN	HLA-K	1	6	0.484693
chr6	29934101	29934286	29934193	ENSG00000228078.1	+	unprocessed_pseudogene	KNOWN	HLA-U	1	1	0.413920
chr6	29941260	29945884	29943572	ENSG00000206503.11	+	protein_coding	KNOWN	HLA-A	8	10	0.413920
chr6	29942075	29943067	29942571	ENSG00000227766.1	-	unprocessed_pseudogene	KNOWN	HCG4P5	1	1	0.413920
chr6	29956596	29958570	29957583	ENSG00000235290.1	+	unprocessed_pseudogene	KNOWN	HLA-W	1	5	0.457987
chr6	29970801	29972464	29971632	ENSG00000229390.1	-	unprocessed_pseudogene	KNOWN	MICD	1	3	0.380117
chr6	29975112	29978410	29976761	ENSG00000204625.10	+	lincRNA	KNOWN	HCG9	2	3	0.380117
chr6	29993209	29993605	29993407	ENSG00000238024.1	+	unprocessed_pseudogene	KNOWN	DDX39BP2	1	2	0.329856
chr6	29994437	29995314	29994875	ENSG00000224312.1	-	unprocessed_pseudogene	KNOWN	MCCD1P2	1	2	0.329856
chr6	30001011	30061640	30031325	ENSG00000204623.8	-	antisense	KNOWN	ZNRD1-AS1	11	12	0.294662
chr6	30005971	30009956	30007963	ENSG00000204622.11	+	transcribed_unprocessed_pseudogene	KNOWN	HLA-J	4	8	0.329856
chr6	30006121	30007116	30006618	ENSG00000237669.1	-	unprocessed_pseudogene	KNOWN	HCG4P3	1	1	0.329856
chr6	30031713	30033003	30032358	ENSG00000232757.1	+	processed_pseudogene	KNOWN	ETF1P1	1	2	0.099897
chr6	30035916	30035983	30035949	ENSG00000278104.1	+	misc_RNA	NOVEL	ZNRD1-AS1_1	1	1	0.099897
chr6	30058115	30058190	30058152	ENSG00000275856.1	+	misc_RNA	NOVEL	ZNRD1-AS1_2	1	1	0.196689
chr6	30058899	30064909	30061904	ENSG00000066379.14	+	protein_coding	KNOWN	ZNRD1	6	5	0.196689
chr6	30061080	30061183	30061131	ENSG00000278773.1	+	misc_RNA	NOVEL	ZNRD1-AS1_3	1	1	0.196689
chr6	30066709	30070333	30068521	ENSG00000204619.7	+	protein_coding	KNOWN	PPP1R11	6	4	0.211393
chr6	30070266	30075887	30073076	ENSG00000204618.8	-	protein_coding	KNOWN	RNF39	2	5	0.356234
chr6	30088821	30088953	30088887	ENSG00000252901.1	-	miRNA	NOVEL	AL669914.1	1	1	0.356234
chr6	30102897	30113106	30108001	ENSG00000204616.10	-	protein_coding	KNOWN	TRIM31	7	9	0.237312
chr6	30105240	30114724	30109982	ENSG00000231226.1	+	antisense	KNOWN	TRIM31-AS1	1	4	0.355895
chr6	30132805	30132966	30132885	ENSG00000252228.1	-	snoRNA	NOVEL	SNORA48	1	1	0.274322
chr6	30136108	30148735	30142421	ENSG00000204614.8	+	protein_coding	KNOWN	TRIM40	4	6	0.274322
chr6	30151945	30160934	30156439	ENSG00000204613.10	-	protein_coding	KNOWN	TRIM10	2	8	0.369526
chr6	30163206	30172696	30167951	ENSG00000204610.12	+	protein_coding	KNOWN	TRIM15	5	8	0.343498
chr6	30184455	30213427	30198941	ENSG00000234127.8	-	protein_coding	KNOWN	TRIM26	8	10	0.490875
chr6	30186798	30188614	30187706	ENSG00000233892.1	-	processed_pseudogene	KNOWN	PAIP1P1	1	2	0.277942
chr6	30234039	30326134	30280086	ENSG00000270604.5	-	lincRNA	KNOWN	HCG17	2	5	0.344716
chr6	30238301	30242279	30240290	ENSG00000236475.1	+	unprocessed_pseudogene	KNOWN	TRIM26BP	1	3	0.115451
chr6	30259584	30293014	30276299	ENSG00000243753.5	+	transcribed_unprocessed_pseudogene	KNOWN	HLA-L	3	7	0.433466
chr6	30282349	30286054	30284201	ENSG00000280128.1	-	TEC	KNOWN	XXbac-BPG283O16.9	1	1	0.560469
chr6	30287397	30327150	30307273	ENSG00000231074.8	-	antisense	KNOWN	HCG18	16	5	0.424989
chr6	30326479	30343729	30335104	ENSG00000204599.14	+	protein_coding	KNOWN	TRIM39	11	9	0.522138
chr6	30328907	30346854	30337880	ENSG00000248167.7	+	protein_coding	KNOWN	TRIM39-RPP21	1	11	0.551127
chr6	30345131	30346884	30346007	ENSG00000241370.5	+	protein_coding	KNOWN	RPP21	9	5	0.563443
chr6	30351416	30351550	30351483	ENSG00000224372.1	+	unprocessed_pseudogene	KNOWN	HLA-N	1	1	0.456403
chr6	30359278	30359911	30359594	ENSG00000224486.1	-	processed_pseudogene	KNOWN	HCG19P	1	1	0.456403
chr6	30363112	30364280	30363696	ENSG00000236405.1	-	processed_pseudogene	KNOWN	UBQLN1P1	1	1	0.456403
chr6	30414715	30419319	30417017	ENSG00000226577.1	+	unprocessed_pseudogene	KNOWN	MICC	1	5	0.429687
chr6	30466452	30467994	30467223	ENSG00000229068.1	+	processed_pseudogene	KNOWN	TMPOP1	1	2	0.630968
chr6	30468882	30470251	30469566	ENSG00000224936.1	+	processed_pseudogene	KNOWN	SUCLA2P1	1	1	0.668085
chr6	30485940	30486590	30486265	ENSG00000236603.2	+	processed_pseudogene	KNOWN	RANP1	1	1	0.832605
chr6	30489467	30494205	30491836	ENSG00000204592.8	+	protein_coding	KNOWN	HLA-E	3	8	0.886492
chr6	30516266	30519217	30517741	ENSG00000235781.1	+	antisense	KNOWN	XXbac-BPG249D20.9	1	2	0.636797
chr6	30541377	30557174	30549275	ENSG00000204590.12	-	protein_coding	KNOWN	GNL1	5	12	0.841024
chr6	30556886	30563723	30560304	ENSG00000204576.11	+	protein_coding	KNOWN	PRR3	6	5	0.886131
chr6	30571376	30597179	30584277	ENSG00000204574.12	+	protein_coding	KNOWN	ABCF1	7	25	0.818044
chr6	30584312	30584425	30584368	ENSG00000216101.2	+	miRNA	KNOWN	MIR877	1	1	0.750685
chr6	30600400	30618612	30609506	ENSG00000204569.9	-	protein_coding	KNOWN	PPP1R10	7	20	1.106593
chr6	30616229	30616305	30616267	ENSG00000222894.1	-	miRNA	NOVEL	AL662800.1	1	1	1.233464
chr6	30617709	30626395	30622052	ENSG00000204568.11	+	protein_coding	KNOWN	MRPS18B	4	7	1.233464
chr6	30626842	30646823	30636832	ENSG00000137343.17	+	protein_coding	KNOWN	ATAT1	11	13	0.847491
chr6	30633632	30633956	30633794	ENSG00000228415.3	+	processed_pseudogene	KNOWN	PTMAP1	1	1	0.775064
chr6	30647039	30653210	30650124	ENSG00000204564.11	+	protein_coding	KNOWN	C6orf136	13	6	0.962384
chr6	30648666	30648759	30648712	ENSG00000266183.1	+	miRNA	NOVEL	AL662800.2	1	1	0.775064
chr6	30653119	30673037	30663078	ENSG00000204560.9	-	protein_coding	KNOWN	DHX16	4	20	1.119232
chr6	30676389	30687895	30682142	ENSG00000146112.11	-	protein_coding	KNOWN	PPP1R18	6	4	1.031280
chr6	30684796	30684892	30684844	ENSG00000277346.1	+	miRNA	NOVEL	AL662797.1	1	1	1.031280
chr6	30688047	30691420	30689733	ENSG00000137404.14	-	protein_coding	KNOWN	NRM	9	5	0.959959
chr6	30696806	30697535	30697170	ENSG00000230449.1	-	processed_pseudogene	KNOWN	RPL7P4	1	1	0.861986
chr6	30699807	30717889	30708848	ENSG00000137337.14	-	protein_coding	KNOWN	MDC1	9	15	0.861859
chr6	30703067	30713184	30708125	ENSG00000224328.1	+	antisense	KNOWN	MDC1-AS1	1	3	0.861894
chr6	30720201	30725426	30722813	ENSG00000196230.12	+	protein_coding	KNOWN	TUBB	4	4	0.861694
chr6	30723105	30723877	30723491	ENSG00000272540.1	-	antisense	KNOWN	XXbac-BPG252P9.9	1	1	0.861694
chr6	30727709	30742733	30735221	ENSG00000137312.14	-	protein_coding	KNOWN	FLOT1	12	13	1.181348
chr6	30736304	30736414	30736359	ENSG00000201988.2	-	misc_RNA	NOVEL	Y_RNA	1	1	1.238833
chr6	30742929	30743592	30743260	ENSG00000272273.1	+	antisense	KNOWN	XXbac-BPG252P9.10	1	2	1.238833
chr6	30743199	30744554	30743876	ENSG00000137331.11	-	protein_coding	KNOWN	IER3	2	2	1.238833
chr6	30751038	30751289	30751163	ENSG00000263608.2	+	misc_RNA	KNOWN	RN7SL353P	1	1	1.200926
chr6	30766825	30792250	30779537	ENSG00000228022.5	+	lincRNA	KNOWN	HCG20	2	4	0.929539
chr6	30798654	30830659	30814656	ENSG00000214894.6	-	lincRNA	KNOWN	LINC00243	2	2	0.723875
chr6	30839526	30848159	30843842	ENSG00000237923.1	-	lincRNA	KNOWN	XXbac-BPG27H4.8	1	3	0.861935
chr6	30864250	30864552	30864401	ENSG00000202241.1	+	misc_RNA	KNOWN	RN7SKP186	1	1	0.720482
chr6	30866982	30875918	30871450	ENSG00000237775.1	-	antisense	KNOWN	DDR1-AS1	1	2	0.813582
chr6	30876421	30900156	30888288	ENSG00000204580.11	+	protein_coding	KNOWN	DDR1	58	21	1.119971
chr6	30890883	30890972	30890927	ENSG00000264594.1	+	miRNA	KNOWN	MIR4640	1	1	1.466116
chr6	30908184	30914106	30911145	ENSG00000213780.10	+	protein_coding	KNOWN	GTF2H4	6	14	0.983393
chr6	30908242	30926459	30917350	ENSG00000137411.16	+	protein_coding	KNOWN	VARS2	13	41	0.837197
chr6	30931353	30955636	30943494	ENSG00000196260.4	-	protein_coding	KNOWN	SFTA2	3	6	0.864125
chr6	30932618	30932709	30932663	ENSG00000252761.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.928191
chr6	30940972	30954221	30947596	ENSG00000168631.11	+	protein_coding	KNOWN	DPCR1	2	4	0.840245
chr6	30945979	30954862	30950420	ENSG00000233529.1	-	antisense	KNOWN	HCG21	1	3	0.777104
chr6	30961403	30962396	30961899	ENSG00000275906.1	-	processed_pseudogene	KNOWN	XXbac-BPG118E17.10	1	2	0.652208
chr6	30983718	30989903	30986810	ENSG00000204544.5	+	protein_coding	KNOWN	MUC21	2	3	0.398799
chr6	31010474	31035402	31022938	ENSG00000261272.1	+	protein_coding	KNOWN	MUC22	1	4	0.434294
chr6	31053450	31059890	31056670	ENSG00000228789.6	+	lincRNA	KNOWN	HCG22	6	4	0.707651
chr6	31083010	31083109	31083059	ENSG00000222895.1	+	snRNA	KNOWN	RNU6-1133P	1	1	0.703589
chr6	31111223	31112559	31111891	ENSG00000204542.2	-	protein_coding	KNOWN	C6orf15	1	2	1.075118
chr6	31114750	31140092	31127421	ENSG00000204540.10	+	protein_coding	KNOWN	PSORS1C1	9	6	1.008628
chr6	31115090	31120446	31117768	ENSG00000204539.3	-	protein_coding	KNOWN	CDSN	1	2	1.075118
chr6	31137536	31139350	31138443	ENSG00000204538.3	-	protein_coding	KNOWN	PSORS1C2	1	2	0.908171
chr6	31140727	31140913	31140820	ENSG00000238211.1	+	processed_pseudogene	KNOWN	POLR2LP	1	1	0.908171
chr6	31142439	31158238	31150338	ENSG00000204536.13	-	protein_coding	KNOWN	CCHCR1	30	18	1.025226
chr6	31158542	31167159	31162850	ENSG00000137310.11	+	protein_coding	KNOWN	TCF19	4	4	1.132634
chr6	31164337	31180731	31172534	ENSG00000204531.15	-	protein_coding	KNOWN	POU5F1	9	6	1.023338
chr6	31173735	31177899	31175817	ENSG00000204528.3	-	sense_intronic	KNOWN	PSORS1C3	1	3	0.965675
chr6	31195200	31198037	31196618	ENSG00000272501.1	-	antisense	KNOWN	XXbac-BPG299F13.17	1	1	1.042711
chr6	31197760	31203968	31200864	ENSG00000206344.6	+	protein_coding	KNOWN	HCG27	4	2	1.042711
chr6	31200165	31201918	31201041	ENSG00000271821.1	-	lincRNA	KNOWN	XXbac-BPG299F13.14	1	2	1.042711
chr6	31222913	31223093	31223003	ENSG00000255726.1	+	unprocessed_pseudogene	KNOWN	XXbac-BPG299F13.15	1	1	0.374722
chr6	31224342	31225058	31224700	ENSG00000255899.1	-	unprocessed_pseudogene	KNOWN	XXbac-BPG299F13.16	1	3	0.374722
chr6	31268749	31272130	31270439	ENSG00000204525.15	-	protein_coding	KNOWN	HLA-C	9	8	0.390694
chr6	31275572	31278754	31277163	ENSG00000214892.4	+	processed_pseudogene	KNOWN	USP8P1	1	1	0.511291
chr6	31280317	31281519	31280918	ENSG00000227939.1	+	processed_pseudogene	KNOWN	RPL3P2	1	1	0.511291
chr6	31287510	31288964	31288237	ENSG00000231402.1	-	processed_pseudogene	KNOWN	WASF5P	1	1	0.511291
chr6	31293908	31301642	31297775	ENSG00000256166.1	-	lincRNA	KNOWN	XXbac-BPG248L24.13	1	4	-0.006498
chr6	31307815	31308549	31308182	ENSG00000229836.1	-	unprocessed_pseudogene	KNOWN	XXbac-BPG248L24.10	1	2	-0.006498
chr6	31353872	31357188	31355530	ENSG00000234745.9	-	protein_coding	KNOWN	HLA-B	7	8	0.509113
chr6	31355224	31355316	31355270	ENSG00000277402.1	-	miRNA	KNOWN	MIR6891	1	1	0.509113
chr6	31356647	31357637	31357142	ENSG00000271581.1	+	unprocessed_pseudogene	KNOWN	XXbac-BPG248L24.12	1	1	0.509113
chr6	31366352	31366898	31366625	ENSG00000228432.1	-	processed_pseudogene	KNOWN	DHFRP2	1	1	0.509113
chr6	31370134	31370240	31370187	ENSG00000201658.1	+	snRNA	KNOWN	RNU6-283P	1	1	0.280894
chr6	31374318	31374403	31374360	ENSG00000265294.1	-	miRNA	NOVEL	AL671883.1	1	1	0.280894
chr6	31377419	31378019	31377719	ENSG00000230994.1	+	processed_pseudogene	KNOWN	FGFR3P1	1	1	0.280894
chr6	31380411	31380839	31380625	ENSG00000223702.1	+	processed_pseudogene	KNOWN	ZDHHC20P2	1	1	0.280894
chr6	31382074	31382288	31382181	ENSG00000225851.1	-	unprocessed_pseudogene	KNOWN	HLA-S	1	2	0.280894
chr6	31394289	31395495	31394892	ENSG00000272221.1	-	lincRNA	KNOWN	XXbac-BPG181B23.7	1	1	0.682348
chr6	31399784	31415315	31407549	ENSG00000204520.12	+	protein_coding	KNOWN	MICA	3	6	0.787389
chr6	31400702	31477506	31439104	ENSG00000206337.10	+	sense_overlapping	KNOWN	HCP5	4	3	0.629588
chr6	31402152	31402250	31402201	ENSG00000199332.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.682348
chr6	31441667	31446973	31444320	ENSG00000230174.1	+	lincRNA	KNOWN	LINC01149	1	2	0.407194
chr6	31462728	31463336	31463032	ENSG00000233902.1	-	unprocessed_pseudogene	KNOWN	XXbac-BPG181B23.6	1	1	0.407768
chr6	31494881	31511124	31503002	ENSG00000204516.9	+	protein_coding	KNOWN	MICB	4	6	0.821274
chr6	31496689	31496790	31496739	ENSG00000201680.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.817998
chr6	31515979	31516211	31516095	ENSG00000256851.1	+	unprocessed_pseudogene	KNOWN	XXbac-BPG16N22.5	1	1	0.865299
chr6	31519480	31520291	31519885	ENSG00000219797.2	-	processed_pseudogene	KNOWN	PPIAP9	1	2	0.865299
chr6	31528114	31528693	31528403	ENSG00000225499.1	+	processed_pseudogene	KNOWN	RPL15P4	1	1	0.865299
chr6	31528717	31530232	31529474	ENSG00000204511.2	+	protein_coding	KNOWN	MCCD1	1	2	0.866064
chr6	31530219	31542448	31536333	ENSG00000198563.13	-	protein_coding	KNOWN	DDX39B	21	11	0.870271
chr6	31530219	31546608	31538413	ENSG00000254870.5	-	protein_coding	KNOWN	ATP6V1G2-DDX39B	3	13	0.870271
chr6	31532757	31532869	31532813	ENSG00000276877.1	-	miRNA	NOVEL	AL662801.1	1	1	0.870271
chr6	31536374	31536449	31536411	ENSG00000201785.1	-	snoRNA	KNOWN	SNORD117	1	1	0.870271
chr6	31541101	31541178	31541139	ENSG00000265236.1	-	snoRNA	KNOWN	SNORD84	1	1	0.870271
chr6	31542304	31543138	31542721	ENSG00000234006.1	+	antisense	KNOWN	DDX39B-AS1	2	2	0.870271
chr6	31544462	31548427	31546444	ENSG00000213760.10	-	protein_coding	KNOWN	ATP6V1G2	6	3	0.870271
chr6	31546870	31558829	31552849	ENSG00000204498.10	+	protein_coding	KNOWN	NFKBIL1	5	4	1.170457
chr6	31572054	31574324	31573189	ENSG00000226979.8	+	protein_coding	KNOWN	LTA	4	4	1.193353
chr6	31575567	31578336	31576951	ENSG00000232810.3	+	protein_coding	KNOWN	TNF	1	4	1.193353
chr6	31580525	31582522	31581523	ENSG00000227507.2	-	protein_coding	KNOWN	LTB	4	4	1.193353
chr6	31586124	31588909	31587516	ENSG00000204482.10	+	protein_coding	KNOWN	LST1	21	5	1.193353
chr6	31588895	31592985	31590940	ENSG00000204475.9	-	protein_coding	KNOWN	NCR3	6	5	1.110285
chr6	31611083	31611356	31611219	ENSG00000230622.1	-	processed_pseudogene	KNOWN	UQCRHP1	1	1	0.830760
chr6	31615184	31617021	31616102	ENSG00000204472.12	+	protein_coding	KNOWN	AIF1	5	6	0.830760
chr6	31620720	31637771	31629245	ENSG00000204469.12	+	protein_coding	KNOWN	PRRC2A	14	31	1.116930
chr6	31623079	31623210	31623144	ENSG00000200816.1	+	snoRNA	KNOWN	SNORA38	1	1	0.830760
chr6	31633787	31633858	31633822	ENSG00000274494.1	+	miRNA	KNOWN	MIR6832	1	1	1.458589
chr6	31639028	31652705	31645866	ENSG00000204463.12	-	protein_coding	KNOWN	BAG6	29	25	1.483069
chr6	31652416	31658210	31655313	ENSG00000204444.10	+	protein_coding	KNOWN	APOM	3	6	1.582317
chr6	31658298	31660772	31659535	ENSG00000204439.3	-	protein_coding	KNOWN	C6orf47	1	1	1.582317
chr6	31658329	31660721	31659525	ENSG00000227198.1	+	antisense	KNOWN	C6orf47-AS1	1	2	1.582317
chr6	31661229	31666283	31663756	ENSG00000204438.10	-	protein_coding	KNOWN	GPANK1	8	4	1.582317
chr6	31663288	31663401	31663344	ENSG00000201207.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.582317
chr6	31665236	31670343	31667789	ENSG00000204435.13	+	protein_coding	KNOWN	CSNK2B	8	7	1.552918
chr6	31666102	31673546	31669824	ENSG00000263020.6	+	protein_coding	KNOWN	XXbac-BPG32J3.22	3	8	1.374349
chr6	31670167	31673776	31671971	ENSG00000240053.8	+	protein_coding	KNOWN	LY6G5B	3	3	1.145859
chr6	31676684	31684040	31680362	ENSG00000204428.12	-	protein_coding	KNOWN	LY6G5C	7	4	1.145859
chr6	31686949	31703444	31695196	ENSG00000204427.11	-	protein_coding	KNOWN	ABHD16A	16	20	1.331622
chr6	31686962	31714072	31700517	ENSG00000204422.7	-	protein_coding	KNOWN	XXbac-BPG32J3.20	1	22	1.291670
chr6	31701029	31701091	31701060	ENSG00000266776.1	-	miRNA	KNOWN	MIR4646	1	1	1.373763
chr6	31706885	31710595	31708740	ENSG00000204424.9	+	protein_coding	KNOWN	LY6G6F	1	6	1.313283
chr6	31706904	31717918	31712411	ENSG00000250641.1	+	protein_coding	KNOWN	XXbac-BPG32J3.19	1	6	1.103079
chr6	31711771	31714065	31712918	ENSG00000255552.7	-	protein_coding	KNOWN	LY6G6E	4	3	0.997287
chr6	31715356	31717804	31716580	ENSG00000244355.7	+	protein_coding	KNOWN	LY6G6D	3	3	0.997287
chr6	31718594	31726714	31722654	ENSG00000204420.8	+	protein_coding	KNOWN	C6orf25	11	7	0.997287
chr6	31718648	31721845	31720246	ENSG00000204421.2	-	protein_coding	KNOWN	LY6G6C	2	4	0.997287
chr6	31727038	31730617	31728827	ENSG00000213722.8	-	protein_coding	KNOWN	DDAH2	10	7	1.063696
chr6	31730581	31739763	31735172	ENSG00000213719.8	-	protein_coding	KNOWN	CLIC1	5	8	1.381877
chr6	31739948	31762834	31751391	ENSG00000204410.14	+	protein_coding	KNOWN	MSH5	19	25	1.300790
chr6	31740020	31764851	31752435	ENSG00000255152.8	+	protein_coding	KNOWN	MSH5-SAPCD1	4	29	1.295397
chr6	31756951	31757053	31757002	ENSG00000252743.1	-	snRNA	KNOWN	RNU6-850P	1	1	1.237291
chr6	31762799	31764851	31763825	ENSG00000228727.8	+	protein_coding	KNOWN	SAPCD1	4	5	1.237291
chr6	31764310	31765588	31764949	ENSG00000235663.1	-	antisense	KNOWN	SAPCD1-AS1	1	2	1.237291
chr6	31765590	31777294	31771442	ENSG00000204396.10	-	protein_coding	KNOWN	VWA7	5	17	1.462481
chr6	31777518	31795953	31786735	ENSG00000204394.12	-	protein_coding	KNOWN	VARS	14	30	1.471635
chr6	31778817	31778905	31778861	ENSG00000201555.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.598583
chr6	31797396	31806984	31802190	ENSG00000204392.10	-	protein_coding	KNOWN	LSM2	7	5	1.205521
chr6	31809619	31815065	31812342	ENSG00000204390.9	-	protein_coding	KNOWN	HSPA1L	1	2	1.286318
chr6	31815464	31817946	31816705	ENSG00000204389.9	+	protein_coding	KNOWN	HSPA1A	2	2	1.292379
chr6	31827735	31830255	31828995	ENSG00000204388.6	+	protein_coding	KNOWN	HSPA1B	1	1	1.278819
chr6	31834608	31839766	31837187	ENSG00000204387.12	+	protein_coding	KNOWN	C6orf48	10	5	1.158898
chr6	31835263	31835326	31835294	ENSG00000201823.1	+	snoRNA	KNOWN	SNORD48	1	1	1.158898
chr6	31837076	31837142	31837109	ENSG00000201754.1	+	snoRNA	KNOWN	SNORD52	1	1	1.158898
chr6	31857659	31862906	31860282	ENSG00000204386.10	-	protein_coding	KNOWN	NEU1	4	6	1.036742
chr6	31863192	31879046	31871119	ENSG00000204385.10	-	protein_coding	KNOWN	SLC44A4	9	21	1.296835
chr6	31879759	31897687	31888723	ENSG00000204371.11	-	protein_coding	KNOWN	EHMT2	12	28	1.437166
chr6	31883761	31884204	31883982	ENSG00000237080.2	+	antisense	KNOWN	EHMT2-AS1	1	2	1.492530
chr6	31897785	31945672	31921728	ENSG00000166278.14	+	protein_coding	KNOWN	C2	17	18	1.129827
chr6	31899607	31901992	31900799	ENSG00000204366.3	-	protein_coding	KNOWN	ZBTB12	1	2	1.363425
chr6	31927698	31952048	31939873	ENSG00000244255.5	+	protein_coding	KNOWN	XXbac-BPG116M5.17	2	30	1.059983
chr6	31934474	31941724	31938099	ENSG00000281756.1	-	antisense	KNOWN	C2-AS1	1	3	1.027861
chr6	31945650	31952084	31948867	ENSG00000243649.8	+	protein_coding	KNOWN	CFB	14	18	1.137295
chr6	31952087	31959110	31955598	ENSG00000204356.11	-	protein_coding	KNOWN	NELFE	14	11	1.365557
chr6	31956839	31956940	31956889	ENSG00000221267.1	-	miRNA	KNOWN	MIR1236	1	1	1.365557
chr6	31959080	31969755	31964417	ENSG00000204351.11	+	protein_coding	KNOWN	SKIV2L	16	28	1.365557
chr6	31969810	31972292	31971051	ENSG00000204348.9	-	protein_coding	KNOWN	DXO	15	7	1.474863
chr6	31971091	31982821	31976956	ENSG00000204344.14	+	protein_coding	KNOWN	STK19	17	8	1.483872
chr6	31982024	32002681	31992352	ENSG00000244731.7	+	protein_coding	KNOWN	C4A	17	41	1.287457
chr6	31999976	32003521	32001748	ENSG00000233627.2	-	antisense	KNOWN	C4A-AS1	1	2	1.163942
chr6	32005636	32008451	32007043	ENSG00000204338.8	+	transcribed_unprocessed_pseudogene	KNOWN	CYP21A1P	2	10	1.163942
chr6	32006168	32007104	32006636	ENSG00000279546.1	-	protein_coding	KNOWN	AL645922.1	1	2	1.163942
chr6	32008614	32012472	32010543	ENSG00000248290.1	-	unprocessed_pseudogene	KNOWN	TNXA	1	13	1.110644
chr6	32013270	32013787	32013528	ENSG00000250535.1	+	unprocessed_pseudogene	KNOWN	STK19B	1	3	1.080794
chr6	32014762	32035418	32025090	ENSG00000224389.8	+	protein_coding	KNOWN	C4B	16	41	1.159487
chr6	32032713	32036258	32034485	ENSG00000229776.1	-	antisense	KNOWN	C4B-AS1	1	2	1.380753
chr6	32038265	32041670	32039967	ENSG00000231852.6	+	protein_coding	KNOWN	CYP21A2	15	10	1.380753
chr6	32041154	32115334	32078244	ENSG00000168477.17	-	protein_coding	KNOWN	TNXB	9	44	1.242741
chr6	32078508	32078628	32078568	ENSG00000252512.1	-	rRNA	KNOWN	RNA5SP206	1	1	1.135178
chr6	32098176	32128253	32113214	ENSG00000213676.10	-	protein_coding	KNOWN	ATF6B	9	18	1.237445
chr6	32128707	32130291	32129499	ENSG00000204315.3	-	protein_coding	KNOWN	FKBPL	1	2	1.253643
chr6	32148359	32154373	32151366	ENSG00000204314.10	-	protein_coding	KNOWN	PRRT1	12	6	1.060773
chr6	32153441	32163680	32158560	ENSG00000221988.12	+	protein_coding	KNOWN	PPT2	12	10	1.110370
chr6	32153845	32171978	32162911	ENSG00000258388.7	+	protein_coding	KNOWN	PPT2-EGFL8	7	21	1.106565
chr6	32164583	32168281	32166432	ENSG00000241404.6	+	protein_coding	KNOWN	EGFL8	6	9	1.110370
chr6	32168212	32178096	32173154	ENSG00000204310.10	-	protein_coding	KNOWN	AGPAT1	8	7	1.081808
chr6	32170030	32170116	32170073	ENSG00000278512.1	-	miRNA	KNOWN	MIR6721	1	1	1.075504
chr6	32178354	32180793	32179573	ENSG00000204308.7	+	protein_coding	KNOWN	RNF5	2	6	1.075504
chr6	32179816	32179876	32179846	ENSG00000277264.1	+	miRNA	KNOWN	MIR6833	1	1	1.075504
chr6	32180968	32184324	32182646	ENSG00000204305.13	-	protein_coding	KNOWN	AGER	15	11	1.075504
chr6	32184733	32185882	32185307	ENSG00000273333.2	-	3prime_overlapping_ncrna	KNOWN	XXbac-BPG300A18.13	1	2	1.075504
chr6	32184741	32190186	32187463	ENSG00000204304.11	-	protein_coding	KNOWN	PBX2	5	9	1.075535
chr6	32190766	32195523	32193144	ENSG00000213654.9	-	protein_coding	KNOWN	GPSM3	5	8	1.076395
chr6	32194843	32224067	32209455	ENSG00000204301.6	-	protein_coding	KNOWN	NOTCH4	5	30	0.950556
chr6	32255284	32350039	32302661	ENSG00000277427.1	+	antisense	KNOWN	XXbac-BPG154L12.5	1	2	0.148803
chr6	32255711	32265838	32260774	ENSG00000225914.1	+	antisense	KNOWN	XXbac-BPG154L12.4	1	2	0.521550
chr6	32288526	32371912	32330219	ENSG00000204296.11	-	protein_coding	KNOWN	C6orf10	10	33	-0.165436
chr6	32325219	32326178	32325698	ENSG00000237285.1	+	processed_pseudogene	KNOWN	HNRNPA1P2	1	1	-0.122452
chr6	32352877	32352983	32352930	ENSG00000223335.1	+	snRNA	KNOWN	RNU6-603P	1	1	-0.497297
chr6	32390510	32393686	32392098	ENSG00000228962.1	+	antisense	KNOWN	HCG23	1	3	0.233720
chr6	32393963	32407128	32400545	ENSG00000204290.10	-	protein_coding	KNOWN	BTNL2	5	7	0.233720
chr6	32439842	32445046	32442444	ENSG00000204287.13	+	protein_coding	KNOWN	HLA-DRA	2	5	-0.068473
chr6	32459821	32473500	32466660	ENSG00000196301.3	-	unprocessed_pseudogene	KNOWN	HLA-DRB9	1	2	0.069027
chr6	32517343	32530287	32523815	ENSG00000198502.5	-	protein_coding	KNOWN	HLA-DRB5	1	6	0.474932
chr6	32549940	32550090	32550015	ENSG00000251916.1	-	snRNA	KNOWN	RNU1-61P	1	1	0.197399
chr6	32552713	32560022	32556367	ENSG00000229391.7	-	transcribed_unprocessed_pseudogene	KNOWN	HLA-DRB6	3	6	0.284637
chr6	32552990	32589848	32571419	ENSG00000196126.10	-	protein_coding	KNOWN	HLA-DRB1	2	6	0.064134
chr6	32628179	32647062	32637620	ENSG00000196735.11	+	protein_coding	KNOWN	HLA-DQA1	7	6	0.124809
chr6	32659467	32668383	32663925	ENSG00000179344.16	-	protein_coding	KNOWN	HLA-DQB1	9	6	-0.212265
chr6	32659880	32660729	32660304	ENSG00000223534.1	+	antisense	KNOWN	HLA-DQB1-AS1	1	2	-0.212265
chr6	32706124	32706955	32706539	ENSG00000235040.1	-	unprocessed_pseudogene	KNOWN	MTCO3P1	1	1	0.023044
chr6	32718005	32719170	32718587	ENSG00000232080.5	+	processed_transcript	KNOWN	XXbac-BPG254F23.7	4	3	0.091992
chr6	32730758	32731695	32731226	ENSG00000226030.1	-	unprocessed_pseudogene	KNOWN	HLA-DQB3	1	2	-0.066912
chr6	32741342	32747215	32744278	ENSG00000237541.3	+	protein_coding	KNOWN	HLA-DQA2	1	5	-0.066912
chr6	32749912	32749979	32749945	ENSG00000263649.1	-	miRNA	KNOWN	MIR3135B	1	1	-0.066912
chr6	32756098	32763534	32759816	ENSG00000232629.8	-	protein_coding	KNOWN	HLA-DQB2	4	6	0.016834
chr6	32812763	32817048	32814905	ENSG00000241106.6	-	protein_coding	KNOWN	HLA-DOB	4	6	0.317995
chr6	32813767	32838822	32826294	ENSG00000250264.1	-	protein_coding	KNOWN	XXbac-BPG246D15.9	1	15	0.457415
chr6	32821833	32838780	32830306	ENSG00000204267.13	-	protein_coding	KNOWN	TAP2	5	13	0.523137
chr6	32840717	32844703	32842710	ENSG00000204264.8	-	protein_coding	KNOWN	PSMB8	5	6	0.713912
chr6	32844086	32846495	32845290	ENSG00000204261.8	+	lincRNA	KNOWN	PSMB8-AS1	6	3	0.713912
chr6	32844136	32859585	32851860	ENSG00000240065.7	+	protein_coding	KNOWN	PSMB9	5	6	0.856351
chr6	32845209	32853978	32849593	ENSG00000168394.10	-	protein_coding	KNOWN	TAP1	3	11	0.818075
chr6	32879171	32879848	32879509	ENSG00000234515.1	-	transcribed_processed_pseudogene	KNOWN	PPP1R2P1	2	1	-0.055685
chr6	32896416	32896490	32896453	ENSG00000235301.1	+	unprocessed_pseudogene	KNOWN	HLA-Z	1	1	0.715576
chr6	32934629	32941070	32937849	ENSG00000242574.8	-	protein_coding	KNOWN	HLA-DMB	6	6	0.466840
chr6	32936916	32937010	32936963	ENSG00000212066.1	-	miRNA	NOVEL	AL645941.1	1	1	0.466840
chr6	32937364	32953122	32945243	ENSG00000248993.1	-	protein_coding	KNOWN	XXbac-BPG181M17.5	1	4	0.519232
chr6	32948613	32969094	32958853	ENSG00000204257.14	-	protein_coding	KNOWN	HLA-DMA	9	5	0.713307
chr6	32968660	32981505	32975082	ENSG00000204256.12	+	protein_coding	KNOWN	BRD2	19	14	0.914439
chr6	32970232	32970886	32970559	ENSG00000223837.2	+	sense_intronic	KNOWN	BRD2-IT1	1	2	0.935764
chr6	32972065	32972853	32972459	ENSG00000263756.1	-	antisense	KNOWN	XXbac-BPG181M17.6	1	2	0.935764
chr6	33004178	33009612	33006895	ENSG00000204252.12	-	protein_coding	KNOWN	HLA-DOA	7	6	0.401039
chr6	33064569	33080775	33072672	ENSG00000231389.7	-	protein_coding	KNOWN	HLA-DPA1	7	6	0.322858
chr6	33075926	33087201	33081563	ENSG00000223865.10	+	protein_coding	KNOWN	HLA-DPB1	8	6	0.306649
chr6	33079451	33079860	33079655	ENSG00000224796.1	+	processed_pseudogene	KNOWN	RPL32P1	1	1	0.306649
chr6	33091753	33097295	33094524	ENSG00000231461.1	-	unprocessed_pseudogene	KNOWN	HLA-DPA2	1	4	0.323317
chr6	33103794	33107330	33105562	ENSG00000228688.1	-	unprocessed_pseudogene	KNOWN	COL11A2P1	1	6	0.323317
chr6	33112451	33129084	33120767	ENSG00000224557.7	+	transcribed_unprocessed_pseudogene	KNOWN	HLA-DPB2	2	5	0.651419
chr6	33131216	33143325	33137270	ENSG00000237398.1	-	unprocessed_pseudogene	KNOWN	HLA-DPA3	1	2	0.401589
chr6	33144783	33147767	33146275	ENSG00000230313.1	+	antisense	KNOWN	HCG24	1	2	0.401589
chr6	33162681	33192499	33177590	ENSG00000204248.10	-	protein_coding	KNOWN	COL11A2	6	66	1.023386
chr6	33193588	33200688	33197138	ENSG00000204231.10	-	protein_coding	KNOWN	RXRB	5	10	1.147335
chr6	33199601	33199696	33199648	ENSG00000202441.2	+	misc_RNA	KNOWN	RNY4P10	1	1	1.147335
chr6	33200445	33204439	33202442	ENSG00000112473.16	+	protein_coding	KNOWN	SLC39A7	5	8	1.147335
chr6	33204642	33206831	33205736	ENSG00000204228.3	+	protein_coding	KNOWN	HSD17B8	2	9	1.147335
chr6	33207835	33207944	33207889	ENSG00000199036.1	+	miRNA	KNOWN	MIR219A1	1	1	1.147335
chr6	33208495	33212722	33210608	ENSG00000204227.4	+	protein_coding	KNOWN	RING1	2	7	1.087030
chr6	33215705	33216328	33216016	ENSG00000225463.1	+	processed_pseudogene	KNOWN	ZNF70P1	1	1	1.053722
chr6	33237799	33239690	33238744	ENSG00000223457.1	+	processed_pseudogene	KNOWN	HTATSF1P1	1	3	0.727359
chr6	33246075	33246856	33246465	ENSG00000272217.1	-	lincRNA	KNOWN	XXbac-BPG157A10.21	1	2	0.727359
chr6	33249534	33254989	33252261	ENSG00000232940.5	+	antisense	KNOWN	HCG25	4	5	0.602970
chr6	33250272	33272047	33261159	ENSG00000223501.8	-	protein_coding	KNOWN	VPS52	11	20	0.637253
chr6	33272010	33276510	33274260	ENSG00000231500.6	+	protein_coding	KNOWN	RPS18	8	7	1.079130
chr6	33277132	33284832	33280982	ENSG00000235863.3	+	protein_coding	KNOWN	B3GALT4	2	2	1.079130
chr6	33279108	33289527	33284317	ENSG00000227057.7	-	protein_coding	KNOWN	WDR46	9	15	1.079130
chr6	33287227	33287289	33287258	ENSG00000274694.1	-	miRNA	KNOWN	MIR6873	1	1	1.079130
chr6	33289302	33298401	33293851	ENSG00000204220.9	+	protein_coding	KNOWN	PFDN6	7	5	1.573647
chr6	33290245	33290325	33290285	ENSG00000275010.1	+	miRNA	KNOWN	MIR6834	1	1	1.614670
chr6	33291654	33299324	33295489	ENSG00000237441.9	-	protein_coding	KNOWN	RGL2	11	18	1.614670
chr6	33299694	33314387	33307040	ENSG00000231925.11	-	protein_coding	KNOWN	TAPBP	9	9	1.545316
chr6	33314406	33317942	33316174	ENSG00000236104.2	-	protein_coding	KNOWN	ZBTB22	3	2	1.382442
chr6	33318558	33329269	33323913	ENSG00000204209.10	-	protein_coding	KNOWN	DAXX	13	9	1.382442
chr6	33338978	33339495	33339236	ENSG00000229596.3	+	processed_pseudogene	KNOWN	MYL8P	1	1	0.884896
chr6	33365548	33366243	33365895	ENSG00000228285.2	-	processed_pseudogene	KNOWN	LYPLA2P1	1	1	0.933088
chr6	33389374	33389475	33389424	ENSG00000225644.1	-	processed_pseudogene	KNOWN	RPL35AP4	1	1	0.986499
chr6	33391536	33409924	33400730	ENSG00000237649.7	+	protein_coding	KNOWN	KIFC1	4	11	0.733538
chr6	33400059	33400556	33400307	ENSG00000204194.1	-	processed_pseudogene	KNOWN	RPL12P1	1	1	0.733538
chr6	33410399	33416453	33413426	ENSG00000112511.17	+	protein_coding	KNOWN	PHF1	11	15	1.284637
chr6	33416442	33418317	33417379	ENSG00000112514.15	-	protein_coding	KNOWN	CUTA	15	7	1.284637
chr6	33420070	33457541	33438805	ENSG00000197283.12	+	protein_coding	KNOWN	SYNGAP1	9	20	1.209824
chr6	33437363	33454453	33445908	ENSG00000274259.2	-	antisense	KNOWN	XXbac-BPG294E21.9	2	3	1.187793
chr6	33438331	33438437	33438384	ENSG00000264085.1	+	miRNA	KNOWN	MIR5004	1	1	1.285211
chr6	33453970	33457548	33455759	ENSG00000213588.5	+	protein_coding	KNOWN	ZBTB9	4	2	0.911420
chr6	33540046	33589026	33564536	ENSG00000204188.7	+	unitary_pseudogene	KNOWN	GGNBP1	6	7	0.883939
chr6	33540694	33541000	33540847	ENSG00000242014.3	+	misc_RNA	KNOWN	RN7SL26P	1	1	0.485334
chr6	33562880	33563130	33563005	ENSG00000276746.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.701100
chr6	33572547	33580293	33576420	ENSG00000030110.12	-	protein_coding	KNOWN	BAK1	3	7	1.284637
chr6	33586106	33593338	33589722	ENSG00000197251.3	-	lincRNA	KNOWN	LINC00336	1	2	1.129224
chr6	33601007	33601255	33601131	ENSG00000281834.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.948026
chr6	33620365	33696574	33658469	ENSG00000096433.10	+	protein_coding	KNOWN	ITPR3	2	59	0.995457
chr6	33694293	33711727	33703010	ENSG00000137288.9	-	protein_coding	KNOWN	UQCC2	4	5	1.012270
chr6	33698128	33698234	33698181	ENSG00000266509.1	+	miRNA	KNOWN	MIR3934	1	1	1.038014
chr6	33721670	33746905	33734287	ENSG00000161896.11	-	protein_coding	KNOWN	IP6K3	3	7	0.767701
chr6	33771202	33789136	33780169	ENSG00000161904.11	-	protein_coding	KNOWN	LEMD2	14	10	1.116938
chr6	33794673	33804011	33799342	ENSG00000096395.10	-	protein_coding	KNOWN	MLN	3	5	0.951129
chr6	33867506	33896914	33882210	ENSG00000249346.6	-	lincRNA	KNOWN	LINC01016	5	3	0.846276
chr6	33883170	33883411	33883290	ENSG00000271362.1	+	processed_pseudogene	KNOWN	RP3-468B3.4	1	1	0.811015
chr6	33893323	33927631	33910477	ENSG00000233183.2	+	lincRNA	KNOWN	RP3-468B3.2	3	4	0.836309
chr6	33899135	33899200	33899167	ENSG00000276824.1	+	miRNA	KNOWN	MIR7159	1	1	0.868320
chr6	33999972	34000051	34000011	ENSG00000221697.1	-	miRNA	KNOWN	MIR1275	1	1	0.658441
chr6	34018645	34155622	34087133	ENSG00000124493.13	-	protein_coding	KNOWN	GRM4	14	11	0.883182
chr6	34189780	34191079	34190429	ENSG00000271231.1	+	processed_pseudogene	KNOWN	KRT18P9	1	1	0.505909
chr6	34219439	34220066	34219752	ENSG00000214810.4	+	processed_pseudogene	KNOWN	CYCSP55	1	2	0.673964
chr6	34236873	34246231	34241552	ENSG00000137309.19	+	protein_coding	KNOWN	HMGA1	6	6	0.608313
chr6	34240673	34240736	34240704	ENSG00000276404.1	+	miRNA	KNOWN	MIR6835	1	1	0.608313
chr6	34246380	34249470	34247925	ENSG00000186577.11	-	protein_coding	KNOWN	C6orf1	8	5	0.608313
chr6	34248568	34286768	34267668	ENSG00000225339.3	+	processed_transcript	KNOWN	RP11-513I15.6	5	3	0.727109
chr6	34263311	34263673	34263492	ENSG00000220583.1	-	processed_pseudogene	KNOWN	RPL35P2	1	1	0.796343
chr6	34279679	34392674	34336176	ENSG00000272325.1	-	protein_coding	KNOWN	NUDT3	1	5	0.494902
chr6	34288770	34426048	34357409	ENSG00000270800.1	-	protein_coding	KNOWN	RPS10-NUDT3	1	9	0.547393
chr6	34417454	34426125	34421789	ENSG00000124614.13	-	protein_coding	KNOWN	RPS10	7	6	0.733305
chr6	34466061	34535231	34500646	ENSG00000124507.10	+	protein_coding	KNOWN	PACSIN1	7	10	0.707887
chr6	34470790	34470929	34470859	ENSG00000221635.1	-	miRNA	NOVEL	AL157372.1	1	1	0.725317
chr6	34537802	34556333	34547067	ENSG00000124664.10	-	protein_coding	KNOWN	SPDEF	2	6	1.043248
chr6	34576258	34576656	34576457	ENSG00000196114.3	-	processed_pseudogene	KNOWN	RP3-391O22.3	1	1	0.792432
chr6	34587288	34696859	34642073	ENSG00000196821.9	-	protein_coding	KNOWN	C6orf106	3	5	0.508119
chr6	34616538	34617258	34616898	ENSG00000216636.1	+	processed_pseudogene	KNOWN	RPL7P25	1	1	0.569198
chr6	34685355	34685642	34685498	ENSG00000265123.2	-	misc_RNA	KNOWN	RN7SL200P	1	1	0.453547
chr6	34686602	34687106	34686854	ENSG00000220643.1	+	processed_pseudogene	KNOWN	RP3-391O22.1	1	2	0.453547
chr6	34696317	34697470	34696893	ENSG00000272288.5	+	antisense	KNOWN	RP11-140K17.3	2	2	0.379154
chr6	34715613	34715940	34715776	ENSG00000186328.4	+	processed_pseudogene	KNOWN	RP11-140K17.2	1	1	0.282514
chr6	34744176	34744673	34744424	ENSG00000217130.1	+	processed_pseudogene	KNOWN	RP3-375P9.2	1	1	0.302671
chr6	34757406	34773794	34765600	ENSG00000124562.9	+	protein_coding	KNOWN	SNRPC	4	6	0.518209
chr6	34792015	34883138	34837576	ENSG00000065060.16	+	protein_coding	KNOWN	UHRF1BP1	2	22	0.561190
chr6	34821445	34821542	34821493	ENSG00000206717.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.494956
chr6	34873831	34873927	34873879	ENSG00000252106.2	+	misc_RNA	KNOWN	RNY3P15	1	1	0.313316
chr6	34877778	34888089	34882933	ENSG00000064995.16	-	protein_coding	KNOWN	TAF11	2	5	0.313316
chr6	34889265	35091413	34990339	ENSG00000064999.13	+	protein_coding	KNOWN	ANKS1A	2	24	0.532518
chr6	35023522	35023831	35023676	ENSG00000187762.5	+	processed_pseudogene	KNOWN	HSPE1P11	1	1	0.532564
chr6	35070871	35071049	35070960	ENSG00000273870.1	-	processed_pseudogene	KNOWN	RP11-174N3.4	1	1	0.786647
chr6	35118071	35148610	35133340	ENSG00000124678.17	-	protein_coding	KNOWN	TCP11	28	11	0.440853
chr6	35133454	35133538	35133496	ENSG00000264241.1	+	miRNA	NOVEL	AL138721.1	1	1	0.405927
chr6	35139088	35139192	35139140	ENSG00000266330.2	+	miRNA	NOVEL	AL138721.2	1	1	0.405927
chr6	35214419	35253079	35233749	ENSG00000146197.8	+	protein_coding	KNOWN	SCUBE3	1	22	0.753020
chr6	35220370	35224630	35222500	ENSG00000272374.1	-	lincRNA	KNOWN	RP3-329A5.8	1	1	0.553323
chr6	35258909	35295985	35277447	ENSG00000065029.14	+	protein_coding	KNOWN	ZNF76	11	14	0.630871
chr6	35279177	35279819	35279498	ENSG00000217004.1	-	unprocessed_pseudogene	KNOWN	RP3-329A5.1	1	2	0.485064
chr6	35297852	35321771	35309811	ENSG00000023892.10	+	protein_coding	KNOWN	DEF6	3	11	0.521231
chr6	35342558	35428191	35385374	ENSG00000112033.13	+	protein_coding	KNOWN	PPARD	5	9	0.870478
chr6	35443044	35449866	35446455	ENSG00000227154.3	+	unprocessed_pseudogene	KNOWN	MKRNP2	1	4	0.699674
chr6	35452361	35467103	35459732	ENSG00000112039.3	+	protein_coding	KNOWN	FANCE	1	10	0.861935
chr6	35468408	35470785	35469596	ENSG00000198755.10	+	protein_coding	KNOWN	RPL10A	5	6	0.873175
chr6	35470508	35470579	35470543	ENSG00000276712.1	+	miRNA	KNOWN	MIR7111	1	1	0.895927
chr6	35473597	35497076	35485336	ENSG00000007866.18	-	protein_coding	KNOWN	TEAD3	3	13	0.970650
chr6	35497874	35512938	35505406	ENSG00000112041.12	-	protein_coding	KNOWN	TULP1	8	15	1.054775
chr6	35544632	35545669	35545150	ENSG00000228559.1	+	lincRNA	KNOWN	RP3-340B19.3	1	3	0.359214
chr6	35555873	35556264	35556068	ENSG00000219023.1	+	processed_pseudogene	KNOWN	RP3-340B19.2	1	1	0.434880
chr6	35573585	35728583	35651084	ENSG00000096060.14	-	protein_coding	KNOWN	FKBP5	4	12	0.252017
chr6	35607628	35607934	35607781	ENSG00000218749.1	+	processed_pseudogene	KNOWN	RP3-340B19.5	1	1	0.181722
chr6	35651818	35651945	35651881	ENSG00000212579.1	+	snoRNA	NOVEL	SNORA40	1	1	0.184021
chr6	35664717	35664789	35664753	ENSG00000265527.1	-	miRNA	KNOWN	MIR5690	1	1	0.184021
chr6	35701003	35701138	35701070	ENSG00000223063.1	-	miRNA	NOVEL	AL157823.1	1	1	0.360988
chr6	35733867	35736947	35735407	ENSG00000232909.1	-	antisense	KNOWN	RP3-510O8.4	1	4	0.787881
chr6	35737032	35749079	35743055	ENSG00000157343.8	+	protein_coding	KNOWN	ARMC12	4	6	0.787881
chr6	35765908	35766927	35766417	ENSG00000220734.1	+	processed_pseudogene	KNOWN	RP3-510O8.3	1	2	0.477159
chr6	35776594	35779552	35778073	ENSG00000196748.9	+	protein_coding	KNOWN	CLPSL2	4	4	0.390515
chr6	35781017	35793675	35787346	ENSG00000204140.9	+	protein_coding	KNOWN	CLPSL1	2	3	0.488718
chr6	35794982	35797344	35796163	ENSG00000137392.9	-	protein_coding	KNOWN	CLPS	3	3	0.728669
chr6	35805293	35833874	35819583	ENSG00000197753.8	+	protein_coding	KNOWN	LHFPL5	2	4	0.531531
chr6	35832966	35921342	35877154	ENSG00000096063.14	-	protein_coding	KNOWN	SRPK1	14	17	0.222685
chr6	35911481	35911729	35911605	ENSG00000281304.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.279807
chr6	35943514	36024868	35984191	ENSG00000112053.13	-	protein_coding	KNOWN	SLC26A8	8	20	0.205580
chr6	35989515	35990436	35989975	ENSG00000271304.1	-	processed_pseudogene	KNOWN	DPRXP2	1	2	0.207814
chr6	36027677	36111236	36069456	ENSG00000112062.10	+	protein_coding	KNOWN	MAPK14	10	13	0.215654
chr6	36091991	36092646	36092318	ENSG00000237719.1	-	processed_pseudogene	KNOWN	RP1-179N16.3	1	1	0.237109
chr6	36127809	36144524	36136166	ENSG00000156711.16	+	protein_coding	KNOWN	MAPK13	5	12	0.834957
chr6	36146698	36197205	36171951	ENSG00000246982.6	-	antisense	KNOWN	RP1-179N16.6	2	4	0.474349
chr6	36196744	36232790	36214767	ENSG00000096070.19	+	protein_coding	KNOWN	BRPF3	12	13	0.412814
chr6	36243203	36308595	36275899	ENSG00000180316.11	+	protein_coding	KNOWN	PNPLA1	4	8	0.418348
chr6	36315757	36336885	36326321	ENSG00000189325.6	-	protein_coding	KNOWN	C6orf222	1	12	0.437726
chr6	36354091	36387800	36370945	ENSG00000010030.13	-	protein_coding	KNOWN	ETV7	8	8	0.666825
chr6	36386831	36393462	36390146	ENSG00000224666.3	+	antisense	KNOWN	RP1-50J22.4	2	3	0.801728
chr6	36390551	36442889	36416720	ENSG00000179165.10	-	protein_coding	KNOWN	PXT1	2	5	0.553807
chr6	36442767	36491143	36466955	ENSG00000112078.13	+	protein_coding	KNOWN	KCTD20	10	8	0.576152
chr6	36450912	36451201	36451056	ENSG00000240733.3	-	misc_RNA	KNOWN	RN7SL502P	1	1	0.697713
chr6	36493892	36547470	36520681	ENSG00000112079.8	-	protein_coding	KNOWN	STK38	1	14	0.446888
chr6	36510517	36510598	36510557	ENSG00000264878.1	-	miRNA	NOVEL	Z85986.1	1	1	0.390432
chr6	36522191	36522501	36522346	ENSG00000239964.3	+	misc_RNA	KNOWN	RN7SL748P	1	1	0.390432
chr6	36594353	36605600	36599976	ENSG00000112081.16	+	protein_coding	KNOWN	SRSF3	8	7	0.768915
chr6	36622436	36622512	36622474	ENSG00000263894.1	-	miRNA	KNOWN	MIR3925	1	1	0.670165
chr6	36639545	36639672	36639608	ENSG00000238554.1	-	snRNA	KNOWN	RNU1-88P	1	1	1.048048
chr6	36672838	36672944	36672891	ENSG00000251864.1	+	misc_RNA	NOVEL	Y_RNA	1	1	1.040545
chr6	36673621	36675126	36674373	ENSG00000281450.1	-	lincRNA	KNOWN	PANDAR	1	1	1.040545
chr6	36673817	36675270	36674543	ENSG00000213500.3	+	processed_pseudogene	KNOWN	LAP3P2	1	1	1.040545
chr6	36676460	36687339	36681899	ENSG00000124762.13	+	protein_coding	KNOWN	CDKN1A	8	4	1.040545
chr6	36697851	36733183	36715517	ENSG00000255587.7	+	protein_coding	KNOWN	RAB44	2	14	0.770727
chr6	36737050	36737986	36737518	ENSG00000220349.4	+	processed_pseudogene	KNOWN	RP3-431A14.4	1	1	0.519598
chr6	36740775	36840002	36790388	ENSG00000124772.11	-	protein_coding	KNOWN	CPNE5	8	21	0.717486
chr6	36854827	36875024	36864925	ENSG00000137168.7	-	protein_coding	KNOWN	PPIL1	2	4	0.621611
chr6	36871870	36928964	36900417	ENSG00000198663.16	+	protein_coding	KNOWN	C6orf89	4	10	0.470251
chr6	36940071	36944675	36942373	ENSG00000232598.2	-	lincRNA	KNOWN	RP1-90K10.4	1	2	0.568207
chr6	36948263	36964837	36956550	ENSG00000164530.13	+	protein_coding	KNOWN	PI16	3	8	0.686147
chr6	36968141	36986298	36977219	ENSG00000137409.18	-	protein_coding	KNOWN	MTCH1	7	13	0.999007
chr6	37005646	37029070	37017358	ENSG00000146192.14	+	protein_coding	KNOWN	FGD2	11	16	0.754217
chr6	37044860	37045189	37045024	ENSG00000226976.3	+	processed_pseudogene	KNOWN	COX6A1P2	1	1	0.450127
chr6	37091314	37091806	37091560	ENSG00000216412.4	+	processed_pseudogene	KNOWN	RPL12P2	1	1	0.580927
chr6	37170203	37175426	37172814	ENSG00000137193.13	+	protein_coding	KNOWN	PIM1	3	6	0.736661
chr6	37212180	37258155	37235167	ENSG00000172738.11	-	protein_coding	KNOWN	TMEM217	6	4	0.552104
chr6	37257772	37332970	37295371	ENSG00000065491.8	+	protein_coding	KNOWN	TBC1D22B	1	13	0.527825
chr6	37295584	37295742	37295663	ENSG00000275550.1	-	processed_pseudogene	KNOWN	RP4-744I24.4	1	1	0.587802
chr6	37353972	37394738	37374355	ENSG00000112130.16	+	protein_coding	KNOWN	RNF8	8	8	0.436960
chr6	37361185	37361483	37361334	ENSG00000239953.3	+	misc_RNA	KNOWN	RN7SL273P	1	1	0.517298
chr6	37433219	37482827	37458023	ENSG00000137200.12	+	protein_coding	KNOWN	CMTR1	6	24	0.317824
chr6	37482920	37499922	37491421	ENSG00000198937.8	-	protein_coding	KNOWN	CCDC167	1	4	0.740743
chr6	37507348	37535616	37521482	ENSG00000204110.6	+	lincRNA	KNOWN	RP1-153P14.8	1	4	0.556484
chr6	37543553	37547280	37545416	ENSG00000229559.2	-	transcribed_processed_pseudogene	KNOWN	RP1-153P14.3	2	3	0.345748
chr6	37545145	37550860	37548002	ENSG00000227920.2	+	lincRNA	KNOWN	RP1-153P14.5	1	5	0.412282
chr6	37555365	37555422	37555393	ENSG00000263926.1	-	miRNA	KNOWN	MIR4462	1	1	0.787378
chr6	37567716	37571460	37569588	ENSG00000279942.1	+	TEC	KNOWN	RP1-153P14.7	1	1	0.756141
chr6	37630679	37699306	37664992	ENSG00000112139.14	-	protein_coding	KNOWN	MDGA1	10	17	0.674818
chr6	37815777	37819218	37817497	ENSG00000225945.1	-	antisense	KNOWN	RP3-441A12.1	1	3	0.048490
chr6	37819499	38154624	37987061	ENSG00000156639.11	+	protein_coding	KNOWN	ZFAND3	7	6	0.067994
chr6	37832922	37833185	37833053	ENSG00000243313.2	-	misc_RNA	KNOWN	RN7SL285P	1	1	0.100554
chr6	37915573	37915742	37915657	ENSG00000200597.1	+	snRNA	KNOWN	RNU1-87P	1	1	0.044057
chr6	38002832	38003313	38003072	ENSG00000218521.1	-	processed_pseudogene	KNOWN	RP11-420A21.1	1	1	0.115971
chr6	38168451	38640148	38404299	ENSG00000183826.16	-	protein_coding	KNOWN	BTBD9	8	11	0.077821
chr6	38207274	38207345	38207309	ENSG00000200706.1	+	snoRNA	NOVEL	SNORD45	1	1	0.586464
chr6	38359148	38359229	38359188	ENSG00000238716.1	-	miRNA	NOVEL	AL031905.1	1	1	-0.092791
chr6	38481692	38482531	38482111	ENSG00000226533.1	+	antisense	KNOWN	BTBD9-AS1	1	2	0.243110
chr6	38565950	38566055	38566002	ENSG00000199938.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.305506
chr6	38587323	38588529	38587926	ENSG00000217227.1	+	processed_pseudogene	KNOWN	RP1-319M7.2	1	1	-0.213353
chr6	38675925	38703141	38689533	ENSG00000124767.6	-	protein_coding	KNOWN	GLO1	2	6	0.093054
chr6	38714051	38715217	38714634	ENSG00000236355.2	-	lincRNA	KNOWN	RP3-503A6.2	1	2	-0.177398
chr6	38715341	39030529	38872935	ENSG00000124721.17	+	protein_coding	KNOWN	DNAH8	5	93	-0.316565
chr6	38744086	38744386	38744236	ENSG00000244297.3	+	misc_RNA	KNOWN	RN7SL465P	1	1	-0.129181
chr6	38762905	38764694	38763799	ENSG00000219273.1	+	processed_pseudogene	KNOWN	RP1-217P22.2	1	1	-0.689113
chr6	38822307	38822404	38822355	ENSG00000212586.1	-	snoRNA	NOVEL	SNORA8	1	1	-0.476576
chr6	38923029	38953099	38938064	ENSG00000231150.5	-	antisense	KNOWN	RP1-207H1.3	3	4	-0.291597
chr6	38928031	38928153	38928092	ENSG00000220076.1	+	processed_pseudogene	KNOWN	RP1-207H1.2	1	1	-0.328340
chr6	39039603	39039985	39039794	ENSG00000220556.4	-	processed_pseudogene	KNOWN	RP1-202I21.3	1	1	-0.301922
chr6	39048798	39087743	39068270	ENSG00000112164.5	+	protein_coding	KNOWN	GLP1R	1	13	0.336709
chr6	39104064	39115189	39109626	ENSG00000112167.9	-	protein_coding	KNOWN	SAYSD1	3	2	-0.046507
chr6	39110321	39112952	39111636	ENSG00000217165.1	+	processed_pseudogene	KNOWN	ANKRD18EP	1	1	-0.195038
chr6	39188973	39229450	39209211	ENSG00000164626.8	-	protein_coding	KNOWN	KCNK5	1	5	0.215731
chr6	39299001	39314553	39306777	ENSG00000124780.13	-	protein_coding	KNOWN	KCNK17	3	6	0.147807
chr6	39314698	39322968	39318833	ENSG00000095981.10	-	protein_coding	KNOWN	KCNK16	5	6	0.396846
chr6	39329990	39725405	39527697	ENSG00000164627.17	-	protein_coding	KNOWN	KIF6	8	23	-0.210896
chr6	39353747	39354172	39353959	ENSG00000218986.1	+	processed_pseudogene	KNOWN	RP1-137F1.3	1	1	0.099409
chr6	39553811	39554943	39554377	ENSG00000231276.2	+	processed_pseudogene	KNOWN	E2F4P1	1	1	-0.101888
chr6	39620345	39620464	39620404	ENSG00000252990.1	-	snRNA	KNOWN	RNU1-54P	1	1	-0.249700
chr6	39792298	39904877	39848587	ENSG00000146122.16	+	protein_coding	KNOWN	DAAM2	11	26	0.399089
chr6	39818751	39823227	39820989	ENSG00000281969.1	+	TEC	KNOWN	XXyac-YR38GF2.1	1	1	0.482907
chr6	39881804	39900071	39890937	ENSG00000235033.7	-	antisense	KNOWN	RP11-61I13.3	6	4	0.453672
chr6	39899578	39934551	39917064	ENSG00000124615.17	-	protein_coding	KNOWN	MOCS1	9	11	0.262614
chr6	39958414	39958833	39958623	ENSG00000180211.5	-	processed_pseudogene	KNOWN	RP1-278E11.3	1	1	-0.070947
chr6	39992815	40000233	39996524	ENSG00000220586.1	+	processed_pseudogene	KNOWN	TUBBP9	1	2	-0.089455
chr6	40271566	40276237	40273901	ENSG00000227131.1	-	lincRNA	KNOWN	RP11-552E20.1	1	3	-0.378035
chr6	40334954	40379887	40357420	ENSG00000204091.7	+	antisense	KNOWN	TDRG1	4	3	-0.015157
chr6	40344344	40346151	40345247	ENSG00000204092.2	-	lincRNA	KNOWN	LINC00951	1	2	0.030880
chr6	40358744	40369474	40364109	ENSG00000226070.1	-	lincRNA	KNOWN	RP11-552E20.4	1	2	0.163331
chr6	40391586	40587465	40489525	ENSG00000156564.8	-	protein_coding	KNOWN	LRFN2	1	3	-0.000288
chr6	40392730	40392874	40392802	ENSG00000280824.1	+	miRNA	NOVEL	AL591063.1	1	1	-0.193208
chr6	40407853	40407955	40407904	ENSG00000252767.1	+	snRNA	KNOWN	RNU6-250P	1	1	-0.193208
chr6	40501631	40502393	40502012	ENSG00000236075.1	-	sense_intronic	KNOWN	RP11-121P10.1	1	2	-0.003767
chr6	40516336	40523933	40520134	ENSG00000226454.1	-	sense_intronic	KNOWN	RP3-462C17.1	1	3	-0.044859
chr6	40713411	40715363	40714387	ENSG00000237947.1	-	lincRNA	KNOWN	RP11-570K4.1	1	3	0.133214
chr6	41026911	41039217	41033064	ENSG00000124602.9	-	protein_coding	KNOWN	UNC5CL	3	9	0.263534
chr6	41033627	41097787	41065707	ENSG00000124596.16	-	protein_coding	KNOWN	OARD1	16	8	0.349391
chr6	41042554	41044337	41043445	ENSG00000112212.11	+	protein_coding	KNOWN	TSPO2	3	4	0.331283
chr6	41053304	41064511	41058907	ENSG00000124701.5	+	protein_coding	KNOWN	APOBEC2	1	3	0.478573
chr6	41072945	41099976	41086460	ENSG00000001167.14	+	protein_coding	KNOWN	NFYA	2	10	0.245473
chr6	41101022	41140835	41120928	ENSG00000161912.17	+	transcribed_unprocessed_pseudogene	KNOWN	ADCY10P1	3	23	-0.069418
chr6	41149342	41154337	41151839	ENSG00000161911.11	-	protein_coding	KNOWN	TREML1	4	6	0.135041
chr6	41158506	41163186	41160846	ENSG00000095970.16	-	protein_coding	KNOWN	TREM2	3	5	0.192059
chr6	41190277	41201194	41195735	ENSG00000112195.8	-	protein_coding	KNOWN	TREML2	1	5	0.157880
chr6	41208713	41217947	41213330	ENSG00000184106.8	-	transcribed_unprocessed_pseudogene	KNOWN	TREML3P	2	5	0.163792
chr6	41228324	41238882	41233603	ENSG00000188056.11	+	protein_coding	KNOWN	TREML4	3	6	0.090483
chr6	41239520	41239626	41239573	ENSG00000212176.1	-	rRNA	KNOWN	RNA5SP207	1	1	0.076479
chr6	41247369	41249649	41248509	ENSG00000225690.1	+	unprocessed_pseudogene	KNOWN	TREML5P	1	2	0.076479
chr6	41250851	41251097	41250974	ENSG00000274256.1	+	processed_pseudogene	KNOWN	RP1-229K20.8	1	1	-0.253505
chr6	41252696	41252858	41252777	ENSG00000278745.1	+	processed_pseudogene	KNOWN	RP1-229K20.9	1	1	-0.253505
chr6	41267926	41286719	41277322	ENSG00000124731.12	-	protein_coding	KNOWN	TREM1	7	4	-0.026367
chr6	41269875	41270239	41270057	ENSG00000218809.1	-	unprocessed_pseudogene	KNOWN	RP1-229K20.5	1	1	-0.085176
chr6	41302466	41302572	41302519	ENSG00000206745.1	-	snRNA	KNOWN	RNU6-643P	1	1	0.025564
chr6	41308166	41308565	41308365	ENSG00000213461.3	-	processed_pseudogene	KNOWN	RP13-235E23.1	1	1	0.025564
chr6	41335655	41350887	41343271	ENSG00000096264.13	+	protein_coding	KNOWN	NCR2	3	6	0.122109
chr6	41381392	41381832	41381612	ENSG00000279284.1	-	TEC	KNOWN	RP1-149M18.3	1	1	0.398831
chr6	41405819	41406561	41406190	ENSG00000280371.1	+	TEC	KNOWN	RP1-149M18.4	1	1	0.067469
chr6	41494853	41548621	41521737	ENSG00000234753.5	-	antisense	KNOWN	FOXP4-AS1	5	2	0.496048
chr6	41502444	41519852	41511148	ENSG00000226917.5	+	lincRNA	KNOWN	LINC01276	2	3	0.462107
chr6	41546426	41602384	41574405	ENSG00000137166.14	+	protein_coding	KNOWN	FOXP4	6	17	0.735895
chr6	41598723	41598788	41598755	ENSG00000266494.1	+	miRNA	KNOWN	MIR4641	1	1	0.934112
chr6	41636882	41654246	41645564	ENSG00000112559.13	+	protein_coding	KNOWN	MDFI	9	6	0.552791
chr6	41666906	41667649	41667277	ENSG00000230913.1	+	processed_pseudogene	KNOWN	NPM1P51	1	1	0.970976
chr6	41683978	41736259	41710118	ENSG00000112561.17	-	protein_coding	KNOWN	TFEB	17	10	0.774818
chr6	41720396	41734032	41727214	ENSG00000231102.1	+	antisense	KNOWN	RP11-298J23.5	1	2	0.807982
chr6	41736711	41754109	41745410	ENSG00000096088.16	-	protein_coding	KNOWN	PGC	4	9	0.805599
chr6	41764292	41764460	41764376	ENSG00000269387.1	-	lincRNA	KNOWN	RP11-298J23.8	1	1	0.910444
chr6	41770176	41786542	41778359	ENSG00000137218.10	-	protein_coding	KNOWN	FRS3	5	7	0.666686
chr6	41780349	41790141	41785245	ENSG00000124593.14	+	protein_coding	KNOWN	PRICKLE4	5	10	0.667438
chr6	41783474	41787129	41785301	ENSG00000278224.4	+	protein_coding	KNOWN	PRICKLE4	5	6	0.666686
chr6	41787662	41789898	41788780	ENSG00000214736.7	+	protein_coding	KNOWN	TOMM6	2	3	0.666686
chr6	41789896	41895361	41842628	ENSG00000164663.13	-	protein_coding	KNOWN	USP49	6	10	0.324033
chr6	41791410	41791477	41791443	ENSG00000268745.1	+	antisense	KNOWN	RP11-298J23.9	1	1	0.718533
chr6	41832854	41832993	41832923	ENSG00000206977.1	+	snoRNA	NOVEL	SNORA8	1	1	0.206812
chr6	41868622	41869731	41869176	ENSG00000227516.1	+	lincRNA	KNOWN	RP5-973N23.4	1	2	0.220316
chr6	41905354	41921139	41913246	ENSG00000124641.14	-	protein_coding	KNOWN	MED20	8	6	0.669708
chr6	41917416	41917526	41917471	ENSG00000207371.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.759416
chr6	41921188	41933046	41927117	ENSG00000112578.9	+	protein_coding	KNOWN	BYSL	5	7	0.723315
chr6	41934933	42050357	41992645	ENSG00000112576.12	-	protein_coding	KNOWN	CCND3	23	5	0.431301
chr6	42018408	42018514	42018461	ENSG00000206875.1	-	snRNA	KNOWN	RNU6-761P	1	1	0.420940
chr6	42030053	42031382	42030717	ENSG00000223946.1	+	lincRNA	KNOWN	RP11-533O20.2	1	2	0.555939
chr6	42050513	42087461	42068987	ENSG00000137413.15	+	protein_coding	KNOWN	TAF8	10	10	0.649430
chr6	42092233	42094259	42093246	ENSG00000261068.2	-	lincRNA	KNOWN	RP11-7K24.3	1	1	0.651076
chr6	42101118	42142619	42121868	ENSG00000188112.8	-	protein_coding	KNOWN	C6orf132	2	5	0.694228
chr6	42155406	42180056	42167731	ENSG00000048545.13	+	protein_coding	KNOWN	GUCA1A	5	7	0.761685
chr6	42155426	42163439	42159432	ENSG00000214732.2	+	protein_coding	KNOWN	RP1-139D8.6	2	2	0.743264
chr6	42184401	42194916	42189658	ENSG00000112599.8	-	protein_coding	KNOWN	GUCA1B	1	4	0.774371
chr6	42206801	42217865	42212333	ENSG00000048544.5	-	protein_coding	KNOWN	MRPS10	1	7	0.360221
chr6	42224931	42452051	42338491	ENSG00000124496.12	-	protein_coding	KNOWN	TRERF1	5	18	0.461304
chr6	42499710	42500022	42499866	ENSG00000237107.3	+	processed_pseudogene	KNOWN	RP11-256G5.1	1	1	0.301710
chr6	42564062	42693504	42628783	ENSG00000024048.10	+	protein_coding	KNOWN	UBR2	3	47	0.270232
chr6	42664162	42664268	42664215	ENSG00000206848.1	+	snRNA	KNOWN	RNU6-890P	1	1	0.224747
chr6	42696600	42722574	42709587	ENSG00000112619.7	-	protein_coding	KNOWN	PRPH2	1	3	0.801890
chr6	42727234	42727700	42727467	ENSG00000213435.3	+	processed_pseudogene	KNOWN	ATP6V0CP3	1	1	0.947118
chr6	42744481	42746096	42745288	ENSG00000124659.6	-	protein_coding	KNOWN	TBCC	1	1	0.692189
chr6	42746958	42868560	42807759	ENSG00000112624.12	+	protein_coding	KNOWN	GLTSCR1L	3	15	0.713700
chr6	42879618	42889925	42884771	ENSG00000146223.14	+	protein_coding	KNOWN	RPL7L1	10	7	0.363294
chr6	42890265	42890816	42890540	ENSG00000221821.3	-	protein_coding	KNOWN	C6orf226	1	1	0.695849
chr6	42915989	42925835	42920912	ENSG00000171611.9	+	protein_coding	KNOWN	PTCRA	4	5	0.820079
chr6	42929192	42939287	42934239	ENSG00000137161.16	+	protein_coding	KNOWN	CNPY3	2	6	1.130945
chr6	42940364	42948360	42944362	ENSG00000231113.2	+	antisense	KNOWN	RP3-475N16.1	2	4	1.157955
chr6	42956345	42956765	42956555	ENSG00000181524.6	-	processed_pseudogene	KNOWN	RPL24P4	1	1	1.271901
chr6	42960758	42963880	42962319	ENSG00000124713.5	+	protein_coding	KNOWN	GNMT	1	6	1.271901
chr6	42963870	42979220	42971545	ENSG00000124587.13	-	protein_coding	KNOWN	PEX6	2	17	1.122550
chr6	42984499	43012342	42998420	ENSG00000112640.14	+	protein_coding	KNOWN	PPP2R5D	9	16	1.101919
chr6	43012094	43013968	43013031	ENSG00000124733.3	-	protein_coding	KNOWN	MEA1	1	4	1.257051
chr6	43014103	43021298	43017700	ENSG00000124702.17	+	protein_coding	KNOWN	KLHDC3	3	12	1.257051
chr6	43021645	43034156	43027900	ENSG00000124541.6	+	protein_coding	KNOWN	RRP36	3	7	1.193966
chr6	43033897	43034405	43034151	ENSG00000272223.1	-	antisense	KNOWN	RP1-20C7.6	1	1	1.067188
chr6	43036196	43036500	43036348	ENSG00000240625.3	-	misc_RNA	KNOWN	RN7SL403P	1	1	1.067188
chr6	43037617	43053945	43045781	ENSG00000044090.8	-	protein_coding	KNOWN	CUL7	3	26	1.121826
chr6	43040777	43075099	43057938	ENSG00000137171.14	+	protein_coding	KNOWN	KLC4	19	18	1.171769
chr6	43054029	43059806	43056917	ENSG00000112651.11	-	protein_coding	KNOWN	MRPL2	9	7	1.293271
chr6	43074331	43074739	43074535	ENSG00000272170.1	-	antisense	KNOWN	RP11-387M24.5	1	1	0.884396
chr6	43076268	43161719	43118993	ENSG00000112655.15	+	protein_coding	KNOWN	PTK7	20	20	0.912648
chr6	43171299	43181507	43176403	ENSG00000112658.7	+	protein_coding	KNOWN	SRF	1	7	1.160939
chr6	43182175	43224587	43203381	ENSG00000112659.13	+	protein_coding	KNOWN	CUL9	18	41	0.938769
chr6	43213801	43223860	43218830	ENSG00000245261.1	-	antisense	KNOWN	RP3-330M21.5	1	2	0.872026
chr6	43225629	43229484	43227556	ENSG00000112667.12	-	protein_coding	KNOWN	DNPH1	4	4	0.872026
chr6	43243680	43288259	43265969	ENSG00000146216.11	+	protein_coding	KNOWN	TTBK1	2	15	0.877849
chr6	43295694	43305538	43300616	ENSG00000137204.14	+	protein_coding	KNOWN	SLC22A7	9	11	0.857108
chr6	43299710	43308797	43304253	ENSG00000146215.13	-	protein_coding	KNOWN	CRIP3	7	8	0.857108
chr6	43307134	43369478	43338306	ENSG00000171467.15	-	protein_coding	KNOWN	ZNF318	4	10	0.643083
chr6	43310231	43310357	43310294	ENSG00000219222.1	+	processed_pseudogene	KNOWN	RPL12P47	1	1	0.864968
chr6	43328134	43328476	43328305	ENSG00000220614.1	+	processed_pseudogene	KNOWN	RP11-480N24.4	1	1	0.864968
chr6	43363479	43364219	43363849	ENSG00000179157.4	+	processed_pseudogene	KNOWN	RPS2P28	1	1	0.645927
chr6	43364220	43364294	43364257	ENSG00000226558.1	+	processed_pseudogene	KNOWN	RP11-213N20.1	1	1	0.645927
chr6	43427366	43450430	43438898	ENSG00000124574.14	+	protein_coding	KNOWN	ABCC10	10	22	0.726049
chr6	43434542	43434620	43434581	ENSG00000276770.1	+	miRNA	KNOWN	MIR6780B	1	1	0.709376
chr6	43450352	43456632	43453492	ENSG00000171462.14	-	protein_coding	KNOWN	DLK2	4	6	1.187149
chr6	43474186	43474292	43474239	ENSG00000207076.1	+	snRNA	KNOWN	RNU6-1113P	1	1	0.904246
chr6	43477523	43506556	43492039	ENSG00000137221.14	+	protein_coding	KNOWN	TJAP1	15	11	1.039575
chr6	43506969	43510686	43508827	ENSG00000204052.4	-	protein_coding	KNOWN	LRRC73	1	6	1.185014
chr6	43509702	43529585	43519643	ENSG00000171453.17	+	protein_coding	KNOWN	POLR1C	9	9	1.373208
chr6	43511827	43516990	43514408	ENSG00000137207.11	-	protein_coding	KNOWN	YIPF3	17	9	1.376721
chr6	43519180	43519724	43519452	ENSG00000271754.1	-	antisense	KNOWN	RP3-337H4.9	1	1	1.376721
chr6	43522330	43576075	43549202	ENSG00000124571.17	-	protein_coding	KNOWN	XPO5	12	32	0.899099
chr6	43538822	43539703	43539262	ENSG00000219470.1	-	processed_pseudogene	KNOWN	RP3-337H4.6	1	1	0.949034
chr6	43544144	43544270	43544207	ENSG00000252218.1	+	scaRNA	NOVEL	SCARNA15	1	1	0.949034
chr6	43561872	43562419	43562145	ENSG00000271970.1	+	antisense	KNOWN	RP3-337H4.10	1	1	0.676954
chr6	43576150	43615660	43595905	ENSG00000170734.11	+	protein_coding	KNOWN	POLH	3	11	0.827175
chr6	43588230	43591362	43589796	ENSG00000203362.2	-	antisense	KNOWN	RP3-337H4.8	1	2	0.850702
chr6	43605316	43629162	43617239	ENSG00000172432.18	-	protein_coding	KNOWN	GTPBP2	10	12	0.736901
chr6	43629540	43640952	43635246	ENSG00000124688.13	+	protein_coding	KNOWN	MAD2L1BP	3	4	1.172281
chr6	43631501	43631601	43631551	ENSG00000275849.1	-	miRNA	NOVEL	AL353602.1	1	1	1.191527
chr6	43645046	43672599	43658822	ENSG00000172426.15	+	protein_coding	KNOWN	RSPH9	2	6	0.803904
chr6	43671303	43687791	43679547	ENSG00000096080.11	-	protein_coding	KNOWN	MRPS18A	3	6	0.682061
chr6	43705949	43706751	43706350	ENSG00000218107.1	-	processed_pseudogene	KNOWN	RP1-261G23.4	1	1	0.758484
chr6	43722786	43737834	43730310	ENSG00000236961.1	-	lincRNA	KNOWN	RP1-261G23.5	1	3	0.797061
chr6	43770184	43786487	43778335	ENSG00000112715.20	+	protein_coding	KNOWN	VEGFA	29	8	1.156800
chr6	43770429	43770616	43770522	ENSG00000272114.1	-	antisense	KNOWN	RP1-261G23.7	1	1	1.156800
chr6	43851757	43852333	43852045	ENSG00000223469.1	-	lincRNA	KNOWN	RP11-344J7.2	1	2	0.710230
chr6	43995723	44074652	44035187	ENSG00000237686.6	-	antisense	KNOWN	RP5-1120P11.1	2	5	0.925300
chr6	44000580	44005958	44003269	ENSG00000181577.15	+	protein_coding	KNOWN	C6orf223	4	4	0.696763
chr6	44013001	44013101	44013051	ENSG00000265518.1	+	miRNA	NOVEL	AL109615.1	1	1	0.836735
chr6	44073913	44077952	44075932	ENSG00000231881.1	+	lincRNA	KNOWN	RP5-1120P11.3	1	2	1.238310
chr6	44089242	44089696	44089469	ENSG00000183239.5	-	processed_pseudogene	KNOWN	RP5-1120P11.4	1	1	1.238310
chr6	44113454	44127457	44120455	ENSG00000180992.6	-	protein_coding	KNOWN	MRPL14	1	3	0.693282
chr6	44126914	44155519	44141216	ENSG00000137216.18	+	protein_coding	KNOWN	TMEM63B	10	24	0.892230
chr6	44158811	44184402	44171606	ENSG00000137225.12	+	protein_coding	KNOWN	CAPN11	5	23	0.922314
chr6	44209766	44210063	44209914	ENSG00000265439.2	+	misc_RNA	KNOWN	RN7SL811P	1	1	0.669784
chr6	44216939	44218236	44217587	ENSG00000262179.2	+	lincRNA	KNOWN	RP1-302G2.5	2	2	0.713480
chr6	44219505	44234151	44226828	ENSG00000112759.16	+	protein_coding	KNOWN	SLC29A1	10	14	0.738825
chr6	44246166	44253888	44250027	ENSG00000096384.19	+	protein_coding	KNOWN	HSP90AB1	4	12	0.883309
chr6	44254096	44257890	44255993	ENSG00000157593.16	-	protein_coding	KNOWN	SLC35B2	7	4	0.962575
chr6	44254206	44254285	44254245	ENSG00000265700.1	-	miRNA	KNOWN	MIR4647	1	1	0.962575
chr6	44258166	44265788	44261977	ENSG00000146232.14	-	protein_coding	KNOWN	NFKBIE	5	8	0.962575
chr6	44270466	44307506	44288986	ENSG00000178233.17	+	protein_coding	KNOWN	TMEM151B	2	3	0.902574
chr6	44273194	44378957	44326075	ENSG00000272442.2	+	protein_coding	KNOWN	RP11-444E17.6	1	10	0.694436
chr6	44278743	44297688	44288215	ENSG00000146221.9	-	protein_coding	KNOWN	TCTE1	2	5	0.903748
chr6	44299654	44313326	44306490	ENSG00000124608.4	-	protein_coding	KNOWN	AARS2	2	22	0.876076
chr6	44342660	44377167	44359913	ENSG00000249481.6	+	protein_coding	KNOWN	SPATS1	4	9	0.457777
chr6	44387525	44450426	44418975	ENSG00000096401.7	+	protein_coding	KNOWN	CDC5L	1	16	0.173997
chr6	44435641	44435722	44435681	ENSG00000266619.1	+	miRNA	KNOWN	MIR4642	1	1	0.150544
chr6	44525259	44526754	44526006	ENSG00000237530.1	+	lincRNA	KNOWN	RP3-449H6.1	1	3	0.313348
chr6	44551577	44553281	44552429	ENSG00000279076.1	+	TEC	KNOWN	RP3-449H6.2	1	1	0.313379
chr6	44809317	45377953	45093635	ENSG00000196284.13	-	protein_coding	KNOWN	SUPT3H	6	13	-0.138053
chr6	44898711	44899295	44899003	ENSG00000270900.1	+	processed_pseudogene	KNOWN	NUDT19P4	1	1	0.145431
chr6	45097496	45097976	45097736	ENSG00000276156.1	+	unprocessed_pseudogene	KNOWN	RP11-491H9.4	1	2	-0.314001
chr6	45098021	45099260	45098640	ENSG00000277769.1	+	processed_pseudogene	KNOWN	RBM22P4	1	1	-0.314001
chr6	45158870	45159511	45159190	ENSG00000219384.1	+	processed_pseudogene	KNOWN	RP11-491H9.3	1	1	-0.030264
chr6	45197674	45197770	45197722	ENSG00000207769.1	-	miRNA	KNOWN	MIR586	1	1	-0.438523
chr6	45328157	45664349	45496253	ENSG00000124813.20	+	protein_coding	KNOWN	RUNX2	11	9	0.089164
chr6	45421079	45422005	45421542	ENSG00000271857.1	-	antisense	KNOWN	RP1-244F24.1	1	1	0.125939
chr6	45573346	45576770	45575058	ENSG00000261080.1	-	lincRNA	KNOWN	RP1-166H4.2	1	2	0.121286
chr6	45898451	46080395	45989423	ENSG00000112782.15	-	protein_coding	KNOWN	CLIC5	8	6	-0.114311
chr6	46018745	46018851	46018798	ENSG00000212468.1	+	snRNA	KNOWN	RNU6-754P	1	1	0.001018
chr6	46097093	46129706	46113399	ENSG00000231769.2	-	antisense	KNOWN	RP1-8B1.4	2	3	-0.276038
chr6	46129993	46146699	46138346	ENSG00000001561.6	+	protein_coding	KNOWN	ENPP4	1	4	-0.688589
chr6	46159187	46170971	46165079	ENSG00000112796.9	-	protein_coding	KNOWN	ENPP5	3	5	-0.829301
chr6	46204729	46207386	46206057	ENSG00000229349.2	+	processed_pseudogene	KNOWN	ACTG1P9	1	1	-0.452014
chr6	46220736	46491972	46356354	ENSG00000172348.14	-	protein_coding	KNOWN	RCAN2	4	5	-0.383275
chr6	46438310	46438619	46438464	ENSG00000226541.1	+	processed_pseudogene	KNOWN	RP11-795J1.2	1	1	-0.346892
chr6	46492052	46532758	46512405	ENSG00000236466.1	+	antisense	KNOWN	RP11-795J1.1	1	3	-0.373962
chr6	46549580	46652830	46601205	ENSG00000146233.7	-	protein_coding	KNOWN	CYP39A1	5	12	-0.429673
chr6	46652915	46678193	46665554	ENSG00000153291.15	+	protein_coding	KNOWN	SLC25A27	8	9	-0.368156
chr6	46670444	46688165	46679304	ENSG00000242973.6	-	antisense	KNOWN	RP11-446F17.3	3	2	-0.362267
chr6	46687875	46704319	46696097	ENSG00000180113.15	+	protein_coding	KNOWN	TDRD6	3	5	-0.400754
chr6	46704201	46735693	46719947	ENSG00000146070.16	-	protein_coding	KNOWN	PLA2G7	2	12	-0.394059
chr6	46746917	46759506	46753211	ENSG00000230062.5	+	protein_coding	KNOWN	ANKRD66	2	5	-0.201030
chr6	46758296	46761158	46759727	ENSG00000236164.1	-	lincRNA	KNOWN	RP11-268F1.3	1	2	-0.198523
chr6	46793390	46839782	46816586	ENSG00000112818.9	+	protein_coding	KNOWN	MEP1A	2	14	-0.333371
chr6	46852512	46954943	46903727	ENSG00000069122.18	-	protein_coding	KNOWN	ADGRF5	4	21	-0.223634
chr6	46903471	46909078	46906274	ENSG00000225730.1	+	antisense	KNOWN	RP3-365O12.2	1	4	-0.262060
chr6	46997703	47042363	47020033	ENSG00000153292.15	-	protein_coding	KNOWN	ADGRF1	13	15	-0.004639
chr6	47231532	47309905	47270718	ENSG00000146072.6	-	protein_coding	KNOWN	TNFRSF21	1	6	-0.083088
chr6	47368943	47369230	47369086	ENSG00000271328.1	+	processed_pseudogene	KNOWN	B3GNTL1P2	1	1	-0.688695
chr6	47477243	47477572	47477407	ENSG00000270761.1	-	lincRNA	KNOWN	RP11-385F7.1	1	1	-0.213817
chr6	47477789	47627263	47552526	ENSG00000198087.7	+	protein_coding	KNOWN	CD2AP	5	18	-0.275162
chr6	47489067	47489170	47489118	ENSG00000199762.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.213817
chr6	47562622	47563018	47562820	ENSG00000216813.1	+	processed_pseudogene	KNOWN	RP11-812I20.2	1	1	-0.380379
chr6	47656436	47697797	47677116	ENSG00000164393.8	+	protein_coding	KNOWN	ADGRF2	4	11	-0.250639
chr6	47685864	47722021	47703942	ENSG00000153294.11	+	protein_coding	KNOWN	ADGRF4	3	11	-0.217905
chr6	47715283	47715601	47715442	ENSG00000252711.1	+	misc_RNA	KNOWN	RN7SKP116	1	1	-0.315956
chr6	47729827	47740741	47735284	ENSG00000226594.1	-	lincRNA	KNOWN	RP11-550C4.6	1	2	-0.151008
chr6	47752828	47753240	47753034	ENSG00000216616.1	-	processed_pseudogene	KNOWN	RP11-550C4.4	1	1	-0.425067
chr6	47781982	47832780	47807381	ENSG00000124818.14	+	protein_coding	KNOWN	OPN5	5	7	-0.206670
chr6	47823390	47823550	47823470	ENSG00000200340.1	+	snRNA	KNOWN	RNU1-105P	1	1	-0.264439
chr6	47878028	48068689	47973358	ENSG00000244694.7	-	protein_coding	KNOWN	PTCHD4	2	3	-0.469864
chr6	48149203	48150005	48149604	ENSG00000226068.1	-	processed_pseudogene	KNOWN	HNRNPA3P4	1	1	-0.384360
chr6	48213604	48214794	48214199	ENSG00000216835.3	-	processed_pseudogene	KNOWN	RBMXP1	1	1	-0.483123
chr6	48701491	48701872	48701681	ENSG00000278736.1	-	processed_pseudogene	KNOWN	RP1-281E18.1	1	1	-0.377493
chr6	48952070	48952781	48952425	ENSG00000271162.1	-	processed_pseudogene	KNOWN	RP1-57E3.1	1	1	-0.366114
chr6	49077712	49078051	49077881	ENSG00000218337.1	-	processed_pseudogene	KNOWN	RP4-724P12.1	1	1	-0.016261
chr6	49115537	49116115	49115826	ENSG00000274867.1	+	processed_pseudogene	KNOWN	RP4-724P12.2	1	1	-0.527736
chr6	49273600	49273794	49273697	ENSG00000217631.1	+	processed_pseudogene	KNOWN	RP1-142O9.2	1	1	-0.331608
chr6	49344800	49344861	49344830	ENSG00000252457.1	-	snRNA	KNOWN	RNU7-65P	1	1	-0.176497
chr6	49358185	49360420	49359302	ENSG00000277043.1	-	processed_pseudogene	KNOWN	EEF1A1P42	1	2	-0.517218
chr6	49430360	49463191	49446775	ENSG00000146085.7	-	protein_coding	KNOWN	MUT	1	13	-0.257319
chr6	49463378	49493107	49478242	ENSG00000031691.6	+	protein_coding	KNOWN	CENPQ	1	9	-0.364605
chr6	49499958	49527047	49513502	ENSG00000203972.9	+	protein_coding	KNOWN	GLYATL3	2	6	-0.339274
chr6	49550646	49561907	49556276	ENSG00000197261.11	+	protein_coding	KNOWN	C6orf141	7	5	-0.012804
chr6	49565924	49580166	49573045	ENSG00000216998.1	-	unitary_pseudogene	KNOWN	CYP2AC1P	1	7	-0.216968
chr6	49605158	49636839	49620998	ENSG00000112077.15	-	protein_coding	KNOWN	RHAG	3	11	-0.336127
chr6	49692358	49713590	49702974	ENSG00000124490.13	-	protein_coding	KNOWN	CRISP2	3	11	-0.571808
chr6	49721931	49724007	49722969	ENSG00000279127.1	+	TEC	KNOWN	RP3-442L6.4	1	1	-0.661368
chr6	49727384	49744437	49735910	ENSG00000096006.11	-	protein_coding	KNOWN	CRISP3	4	8	-0.614788
chr6	49785651	49787307	49786479	ENSG00000170950.5	-	protein_coding	KNOWN	PGK2	1	1	-0.603154
chr6	49817430	49820442	49818936	ENSG00000235122.3	+	antisense	KNOWN	RP3-417L20.4	1	3	-0.253605
chr6	49823712	49824782	49824247	ENSG00000226707.1	-	lincRNA	KNOWN	RP11-719J20.1	1	3	-0.253605
chr6	49834257	49877096	49855676	ENSG00000124812.14	-	protein_coding	KNOWN	CRISP1	4	8	-0.421669
chr6	49946101	49949444	49947772	ENSG00000214643.5	-	protein_coding	KNOWN	DEFB133	2	2	-0.589186
chr6	49960249	49964105	49962177	ENSG00000177684.3	-	protein_coding	KNOWN	DEFB114	1	2	-0.100653
chr6	49968677	49969625	49969151	ENSG00000214642.1	-	protein_coding	KNOWN	DEFB113	1	2	-0.100653
chr6	50009138	50021981	50015559	ENSG00000203970.3	-	protein_coding	KNOWN	DEFB110	2	2	-0.688316
chr6	50043575	50048651	50046113	ENSG00000180872.4	-	protein_coding	KNOWN	DEFB112	1	2	-0.391687
chr6	50093711	50099282	50096496	ENSG00000226733.1	+	lincRNA	KNOWN	RP11-397G17.1	1	2	-0.773707
chr6	50514035	50521104	50517569	ENSG00000233470.1	+	lincRNA	KNOWN	RP11-524K22.1	1	2	-0.378899
chr6	50587607	50637205	50612406	ENSG00000230472.5	-	lincRNA	KNOWN	RP1-28O17.1	2	5	-0.567901
chr6	50713828	50772988	50743408	ENSG00000008197.4	+	protein_coding	KNOWN	TFAP2D	2	8	-0.329656
chr6	50818723	50847613	50833168	ENSG00000008196.12	+	protein_coding	KNOWN	TFAP2B	3	7	-0.113758
chr6	50857255	50857662	50857458	ENSG00000060303.5	-	processed_pseudogene	KNOWN	RPS17P5	1	1	-0.115053
chr6	50897615	50898225	50897920	ENSG00000216913.2	-	processed_pseudogene	KNOWN	RP4-753D5.3	1	1	-0.410509
chr6	50912712	50913256	50912984	ENSG00000230204.1	-	processed_pseudogene	KNOWN	FTH1P5	1	1	-0.511349
chr6	51385282	51385849	51385565	ENSG00000270306.1	-	processed_pseudogene	KNOWN	RP3-437C15.2	1	1	-0.448577
chr6	51410081	51410537	51410309	ENSG00000232702.3	-	processed_pseudogene	KNOWN	RP3-437C15.1	1	1	-0.148212
chr6	51464690	51464765	51464727	ENSG00000212532.1	+	snoRNA	NOVEL	SNORD66	1	1	-0.606352
chr6	51537155	51537543	51537349	ENSG00000214641.3	-	processed_pseudogene	KNOWN	RP11-793K1.1	1	1	-0.459182
chr6	51599723	51622884	51611303	ENSG00000228689.7	+	antisense	KNOWN	RP3-335N17.2	3	3	-0.509680
chr6	51615300	52087625	51851462	ENSG00000170927.14	-	protein_coding	KNOWN	PKHD1	2	67	-0.344727
chr6	51975673	51975959	51975816	ENSG00000240641.3	+	misc_RNA	KNOWN	RN7SL580P	1	1	-0.409069
chr6	52144331	52144442	52144386	ENSG00000207604.2	+	miRNA	KNOWN	MIR206	1	1	-0.224341
chr6	52146814	52151119	52148966	ENSG00000225613.2	-	lincRNA	KNOWN	LINCMD1	1	3	-0.192779
chr6	52148923	52149041	52148982	ENSG00000199080.1	+	miRNA	KNOWN	MIR133B	1	1	-0.224341
chr6	52186387	52190638	52188512	ENSG00000112115.5	+	protein_coding	KNOWN	IL17A	1	3	-0.148723
chr6	52236681	52244537	52240609	ENSG00000112116.9	-	protein_coding	KNOWN	IL17F	2	3	-0.295031
chr6	52246460	52247362	52246911	ENSG00000218363.1	+	processed_pseudogene	KNOWN	SLC25A20P1	1	1	-0.295031
chr6	52264009	52284881	52274445	ENSG00000112118.17	-	protein_coding	KNOWN	MCM3	7	17	0.205772
chr6	52361421	52407777	52384599	ENSG00000170915.8	+	protein_coding	KNOWN	PAQR8	3	3	0.214382
chr6	52420308	52495785	52458046	ENSG00000096093.14	+	protein_coding	KNOWN	EFHC1	5	11	0.015177
chr6	52497402	52576915	52537158	ENSG00000065308.4	-	protein_coding	KNOWN	TRAM2	1	11	0.521430
chr6	52577307	52583993	52580650	ENSG00000225791.6	+	lincRNA	KNOWN	TRAM2-AS1	4	4	0.644533
chr6	52657373	52657651	52657512	ENSG00000270382.1	+	processed_pseudogene	KNOWN	RP1-152L7.9	1	1	0.219999
chr6	52665148	52669155	52667151	ENSG00000216775.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP1-152L7.5	2	3	0.219999
chr6	52671109	52686588	52678848	ENSG00000096092.5	+	protein_coding	KNOWN	TMEM14A	1	5	0.585032
chr6	52687930	52703825	52695877	ENSG00000220377.1	-	unprocessed_pseudogene	KNOWN	GSTA8P	1	5	0.080550
chr6	52688661	52688998	52688829	ENSG00000271227.1	+	processed_pseudogene	KNOWN	RP1-152L7.8	1	1	0.585032
chr6	52739590	52744656	52742123	ENSG00000237674.1	-	unprocessed_pseudogene	KNOWN	GSTA7P	1	4	0.353829
chr6	52750089	52763569	52756829	ENSG00000244067.2	-	protein_coding	KNOWN	GSTA2	1	7	0.266021
chr6	52765280	52778347	52771813	ENSG00000217228.1	-	unprocessed_pseudogene	KNOWN	GSTA12P	1	4	0.287413
chr6	52791664	52803910	52797787	ENSG00000243955.5	-	protein_coding	KNOWN	GSTA1	3	7	0.328059
chr6	52805613	52813460	52809536	ENSG00000223622.2	-	unprocessed_pseudogene	KNOWN	GSTA6P	1	5	0.243520
chr6	52831655	52870329	52850992	ENSG00000182793.10	-	protein_coding	KNOWN	GSTA5	4	7	0.012886
chr6	52847910	52909685	52878797	ENSG00000174156.13	-	protein_coding	KNOWN	GSTA3	4	7	0.057546
chr6	52847910	52870329	52859119	ENSG00000230375.1	-	unprocessed_pseudogene	KNOWN	GSTA11P	1	6	-0.065497
chr6	52873014	52879940	52876477	ENSG00000230845.1	-	unprocessed_pseudogene	KNOWN	GSTA10P	1	5	0.120420
chr6	52939726	52957521	52948623	ENSG00000243236.6	-	transcribed_unprocessed_pseudogene	KNOWN	GSTA9P	2	6	0.139615
chr6	52977948	52995378	52986663	ENSG00000170899.10	-	protein_coding	KNOWN	GSTA4	6	7	0.272199
chr6	52995620	52995950	52995785	ENSG00000202198.1	+	misc_RNA	KNOWN	RN7SK	1	1	0.660504
chr6	53001279	53061802	53031540	ENSG00000112144.15	-	protein_coding	KNOWN	ICK	2	15	0.261174
chr6	53051991	53100873	53076432	ENSG00000112146.16	+	protein_coding	KNOWN	FBXO9	13	13	0.067103
chr6	53090961	53091257	53091109	ENSG00000242865.3	+	misc_RNA	KNOWN	RN7SL244P	1	1	-0.201205
chr6	53125644	53126146	53125895	ENSG00000261745.2	-	sense_overlapping	KNOWN	RP11-506E9.3	1	1	0.310887
chr6	53126964	53148829	53137896	ENSG00000137270.10	-	protein_coding	KNOWN	GCM1	1	6	0.122376
chr6	53153795	53153898	53153846	ENSG00000253026.1	-	snRNA	KNOWN	RNU6-464P	1	1	0.187675
chr6	53196720	53197159	53196939	ENSG00000219074.1	-	processed_pseudogene	KNOWN	SOD1P1	1	1	0.498617
chr6	53206598	53208697	53207647	ENSG00000218713.1	-	processed_pseudogene	KNOWN	RP1-34L19.1	1	1	0.498617
chr6	53219261	53219424	53219342	ENSG00000206908.1	+	snRNA	KNOWN	RNU1-136P	1	1	0.307498
chr6	53235621	53236297	53235959	ENSG00000219163.2	-	processed_pseudogene	KNOWN	HMGB1P20	1	1	0.100925
chr6	53267398	53349179	53308288	ENSG00000012660.13	-	protein_coding	KNOWN	ELOVL5	7	9	0.196267
chr6	53276993	53277071	53277032	ENSG00000264056.1	+	miRNA	KNOWN	MIR5685	1	1	0.261917
chr6	53336943	53337346	53337144	ENSG00000217527.1	-	transcribed_processed_pseudogene	KNOWN	RPS16P5	1	1	0.292586
chr6	53350158	53350705	53350431	ENSG00000271367.1	+	lincRNA	KNOWN	RP3-483K16.4	1	1	0.209229
chr6	53354715	53355065	53354890	ENSG00000219863.5	+	processed_pseudogene	KNOWN	RPL31P28	1	1	0.209229
chr6	53368670	53369009	53368839	ENSG00000218049.1	+	processed_pseudogene	KNOWN	RPL31P33	1	1	0.209229
chr6	53378503	53378861	53378682	ENSG00000218261.1	+	processed_pseudogene	KNOWN	RP11-96J19.1	1	1	0.005835
chr6	53381519	53382203	53381861	ENSG00000271338.1	+	processed_pseudogene	KNOWN	RP11-96J19.4	1	1	0.005835
chr6	53415294	53415607	53415450	ENSG00000253010.1	-	misc_RNA	KNOWN	RN7SKP256	1	1	0.062244
chr6	53418452	53418737	53418594	ENSG00000271373.1	-	processed_pseudogene	KNOWN	NANOGP3	1	1	0.062244
chr6	53456442	53456533	53456487	ENSG00000216072.2	-	miRNA	NOVEL	AL591034.1	1	1	-0.089121
chr6	53497341	53616970	53557155	ENSG00000001084.10	-	protein_coding	KNOWN	GCLC	13	16	-0.025842
chr6	53503185	53506919	53505052	ENSG00000249379.1	+	antisense	KNOWN	RP1-27K12.4	1	3	-0.054557
chr6	53561289	53617171	53589230	ENSG00000231683.6	-	lincRNA	KNOWN	RP1-27K12.2	7	5	-0.085844
chr6	53628380	53631394	53629887	ENSG00000235899.1	+	antisense	KNOWN	LINC01564	1	3	-0.216307
chr6	53647901	53665708	53656804	ENSG00000124743.5	-	protein_coding	KNOWN	KLHL31	2	3	-0.225730
chr6	53664170	53664312	53664241	ENSG00000275446.1	+	miRNA	NOVEL	AL157773.1	1	1	-0.205689
chr6	53740749	53747022	53743885	ENSG00000227885.1	-	lincRNA	KNOWN	RP11-79N23.1	1	3	0.058439
chr6	53790875	53794274	53792574	ENSG00000228614.1	-	antisense	KNOWN	RP13-476E20.1	1	3	0.082531
chr6	53794497	53924121	53859309	ENSG00000137269.14	+	protein_coding	KNOWN	LRRC1	4	14	0.058014
chr6	53918974	53920788	53919881	ENSG00000271218.1	-	antisense	KNOWN	RP3-523E19.2	1	2	-0.203464
chr6	53929982	54266280	54098131	ENSG00000146147.14	+	protein_coding	KNOWN	MLIP	13	14	-0.299442
chr6	53930022	53997667	53963844	ENSG00000236740.6	+	lincRNA	KNOWN	RP11-411K7.1	2	4	0.004428
chr6	53978549	54079726	54029137	ENSG00000235050.6	-	antisense	KNOWN	MLIP-AS1	13	6	-0.360872
chr6	53998890	54007152	54003021	ENSG00000236996.1	+	sense_intronic	KNOWN	MLIP-IT1	1	4	-0.221899
chr6	54016479	54016777	54016628	ENSG00000218143.2	-	processed_pseudogene	KNOWN	ERHP2	1	1	-0.372514
chr6	54307859	54390152	54349005	ENSG00000137251.15	+	protein_coding	KNOWN	TINAG	4	11	-0.258761
chr6	54365335	54369971	54367653	ENSG00000228231.2	-	antisense	KNOWN	RP11-124I4.2	1	3	-0.451151
chr6	54485169	54485850	54485509	ENSG00000213335.4	-	processed_pseudogene	KNOWN	CLNS1AP1	1	1	-0.387751
chr6	54602487	54603150	54602818	ENSG00000216347.1	-	processed_pseudogene	KNOWN	RP3-334F4.2	1	1	-0.644974
chr6	54624605	54625488	54625046	ENSG00000220773.1	+	processed_pseudogene	KNOWN	RPSAP44	1	1	-0.075303
chr6	54770583	54771134	54770858	ENSG00000220635.2	+	processed_pseudogene	KNOWN	KRASP1	1	1	-0.509181
chr6	54786387	54786492	54786439	ENSG00000251946.1	+	snRNA	KNOWN	RNU6-1023P	1	1	-0.509181
chr6	54840118	54840855	54840486	ENSG00000224984.1	-	antisense	KNOWN	RP11-524H19.2	1	2	-0.433731
chr6	54846771	54942022	54894396	ENSG00000168143.8	+	protein_coding	KNOWN	FAM83B	1	5	-0.472836
chr6	54943167	54945099	54944133	ENSG00000261116.1	+	sense_overlapping	KNOWN	RP3-523K23.2	1	1	-0.673543
chr6	55106460	55282620	55194540	ENSG00000137252.9	+	protein_coding	KNOWN	HCRTR2	2	8	-0.580819
chr6	55327469	55402493	55364981	ENSG00000187871.2	+	protein_coding	KNOWN	GFRAL	1	9	-0.576376
chr6	55434369	55579214	55506791	ENSG00000146151.12	-	protein_coding	KNOWN	HMGCLL1	9	10	-0.630540
chr6	55680642	55681021	55680831	ENSG00000220725.1	-	processed_pseudogene	KNOWN	RP11-228O6.2	1	1	-0.604616
chr6	55753645	55875564	55814604	ENSG00000112175.7	-	protein_coding	KNOWN	BMP5	1	7	-0.658457
chr6	55939790	55940624	55940207	ENSG00000214604.3	-	processed_pseudogene	KNOWN	NPM1P36	1	1	-0.336245
chr6	56056590	56394094	56225342	ENSG00000124749.16	-	protein_coding	KNOWN	COL21A1	12	30	-0.297001
chr6	56276529	56276796	56276662	ENSG00000219095.1	-	processed_pseudogene	KNOWN	RP11-323I14__A.1	1	1	-0.134601
chr6	56331788	56332117	56331952	ENSG00000227602.1	-	sense_intronic	KNOWN	RP3-445N2.1	1	1	-0.169274
chr6	56431950	56433213	56432581	ENSG00000220666.2	-	processed_pseudogene	KNOWN	RCC2P7	1	1	-0.197515
chr6	56432379	56432442	56432410	ENSG00000266793.1	-	miRNA	NOVEL	AL137008.1	1	1	-0.197515
chr6	56457987	56954628	56706307	ENSG00000151914.18	-	protein_coding	KNOWN	DST	36	98	0.087968
chr6	56844002	56864078	56854040	ENSG00000231441.1	+	antisense	KNOWN	RP11-472M19.2	1	4	-0.008139
chr6	56871191	56871743	56871467	ENSG00000216854.2	+	processed_pseudogene	KNOWN	RPL17P26	1	1	0.297311
chr6	56945730	56945836	56945783	ENSG00000200224.2	+	snRNA	KNOWN	RNU6-626P	1	1	0.100981
chr6	56955126	57027342	56991234	ENSG00000151917.17	+	protein_coding	KNOWN	BEND6	4	7	0.020101
chr6	56975606	56976062	56975834	ENSG00000219790.3	-	processed_pseudogene	KNOWN	OSTCP6	1	1	-0.053686
chr6	57004520	57004799	57004659	ENSG00000218980.2	+	processed_pseudogene	KNOWN	FTH1P15	1	1	0.043082
chr6	57029521	57029988	57029754	ENSG00000276576.1	+	processed_pseudogene	KNOWN	MRPL30P1	1	1	-0.127789
chr6	57046532	57055239	57050885	ENSG00000168116.13	+	protein_coding	KNOWN	KIAA1586	3	4	-0.010060
chr6	57086844	57170307	57128575	ENSG00000112200.16	+	protein_coding	KNOWN	ZNF451	18	15	0.086532
chr6	57114894	57174236	57144565	ENSG00000226803.7	-	antisense	KNOWN	RP11-203B9.4	21	8	0.013979
chr6	57172326	57189833	57181079	ENSG00000112208.11	+	protein_coding	KNOWN	BAG2	1	3	0.058243
chr6	57186992	57222314	57204653	ENSG00000112210.11	-	protein_coding	KNOWN	RAB23	2	7	0.118041
chr6	57314805	57646849	57480827	ENSG00000146143.17	+	protein_coding	KNOWN	PRIM2	7	14	-0.082339
chr6	57390132	57390212	57390172	ENSG00000212017.2	+	miRNA	KNOWN	MIR548U	1	1	-0.114459
chr6	57493855	57497691	57495773	ENSG00000266579.1	+	lincRNA	KNOWN	RP1-71H19.2	1	2	0.133812
chr6	57663854	57663967	57663910	ENSG00000281746.1	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.227888
chr6	57855891	57856468	57856179	ENSG00000272541.1	-	lincRNA	KNOWN	XXbac-BPGBPG55C20.1	1	1	-0.109642
chr6	57902609	57903148	57902878	ENSG00000271761.1	-	lincRNA	KNOWN	XXbac-BPGBPG55C20.3	1	1	-0.517633
chr6	57908560	57913911	57911235	ENSG00000272316.1	-	lincRNA	KNOWN	XXbac-BPGBPG55C20.2	1	1	-0.508007
chr6	57919784	57930291	57925037	ENSG00000239650.4	-	unprocessed_pseudogene	KNOWN	GUSBP4	1	5	-0.481176
chr6	57937458	57939015	57938236	ENSG00000218189.4	+	processed_pseudogene	KNOWN	POM121L14P	1	1	0.333578
chr6	57946074	57961501	57953787	ENSG00000215190.8	-	lincRNA	KNOWN	LINC00680	5	6	-0.152639
chr6	57965630	57972218	57968924	ENSG00000225096.1	+	lincRNA	KNOWN	XXbac-BPG55C20.7	1	3	-0.324515
chr6	57967687	57968661	57968174	ENSG00000214563.2	-	processed_pseudogene	KNOWN	GAPDHP15	1	1	-0.318558
chr6	58071720	58073134	58072427	ENSG00000216687.2	-	processed_pseudogene	KNOWN	RP11-278J20.2	1	1	-0.582767
chr6	58119741	58121029	58120385	ENSG00000214561.3	-	processed_pseudogene	KNOWN	RBBP4P4	1	1	-0.223510
chr6	58162610	58187582	58175096	ENSG00000223633.2	+	lincRNA	KNOWN	RP11-143A22.1	1	2	-0.322754
chr6	58386799	58386961	58386880	ENSG00000275046.1	+	processed_pseudogene	KNOWN	RP11-136G2.1	1	1	-0.711866
chr6	60291693	60291774	60291733	ENSG00000212065.3	+	miRNA	NOVEL	AC244258.1	1	1	-0.046528
chr6	60562547	60562700	60562623	ENSG00000280324.2	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.851974
chr6	60562705	60562788	60562746	ENSG00000281441.1	+	sRNA	NOVEL	Clostridiales-1	1	1	-0.851974
chr6	60719222	60720196	60719709	ENSG00000277172.1	-	processed_pseudogene	KNOWN	GAPDHP41	1	1	-0.466975
chr6	60723148	60723898	60723523	ENSG00000275773.1	+	lincRNA	KNOWN	RP11-343D24.2	1	2	-0.466975
chr6	60826185	60826533	60826359	ENSG00000274844.1	-	processed_pseudogene	KNOWN	RP11-325M4.2	1	1	-0.386929
chr6	60873360	60874642	60874001	ENSG00000276290.1	-	processed_pseudogene	KNOWN	RBBP4P3	1	1	-0.283048
chr6	61180832	61180944	61180888	ENSG00000221606.1	-	miRNA	NOVEL	AL356131.1	1	1	-0.302028
chr6	61240898	61241311	61241104	ENSG00000220030.1	+	processed_pseudogene	KNOWN	RP1-91N13.1	1	1	-0.597940
chr6	61574328	61574402	61574365	ENSG00000255633.5	+	processed_pseudogene	KNOWN	MTRNR2L9	1	1	-0.188779
chr6	61585946	61587035	61586490	ENSG00000279892.1	-	protein_coding	KNOWN	AL356135.1	1	2	-0.188779
chr6	61630233	61681049	61655641	ENSG00000250686.2	-	3prime_overlapping_ncrna	KNOWN	RP1-240B8.3	1	6	-0.313170
chr6	61679960	62286227	61983093	ENSG00000112232.8	-	protein_coding	KNOWN	KHDRBS2	1	9	-0.560003
chr6	62460940	62461503	62461221	ENSG00000216859.1	-	processed_pseudogene	KNOWN	RP11-448N11.1	1	1	-0.224865
chr6	62547427	62548272	62547849	ENSG00000217067.2	+	unprocessed_pseudogene	KNOWN	RP11-448N11.2	1	2	-0.281467
chr6	62611153	62611327	62611240	ENSG00000262566.1	-	processed_pseudogene	KNOWN	RP11-448N11.3	1	1	-0.214670
chr6	62683176	62683269	62683222	ENSG00000264206.2	+	miRNA	NOVEL	AL589736.1	1	1	-0.564355
chr6	62726835	62726924	62726879	ENSG00000264410.1	-	miRNA	NOVEL	AL121931.1	1	1	-0.341518
chr6	62983084	62983170	62983127	ENSG00000266682.1	-	miRNA	NOVEL	AL590558.1	1	1	-0.997276
chr6	63193072	63193630	63193351	ENSG00000217477.2	-	processed_pseudogene	KNOWN	RP11-184C23.1	1	1	-0.597408
chr6	63211446	63213024	63212235	ENSG00000198225.5	+	protein_coding	KNOWN	FKBP1C	1	1	-0.290154
chr6	63227485	63227743	63227614	ENSG00000219940.2	+	processed_pseudogene	KNOWN	SPTLC1P3	1	1	-0.290154
chr6	63229087	63230110	63229598	ENSG00000218520.5	-	processed_pseudogene	KNOWN	RP11-184C23.4	1	1	-0.301360
chr6	63275951	63319977	63297964	ENSG00000146166.16	-	protein_coding	KNOWN	LGSN	4	5	-0.306617
chr6	63392222	63392606	63392414	ENSG00000218617.1	+	processed_pseudogene	KNOWN	RP3-407E4.2	1	1	-0.084165
chr6	63395007	63397106	63396056	ENSG00000218274.2	-	unprocessed_pseudogene	KNOWN	RP3-407E4.3	1	5	-0.084165
chr6	63440766	63443580	63442173	ENSG00000218048.2	+	unprocessed_pseudogene	KNOWN	RP3-407E4.4	1	3	-0.022080
chr6	63480134	63481876	63481005	ENSG00000225121.2	+	unprocessed_pseudogene	KNOWN	EEF1B2P5	1	2	-0.174795
chr6	63521761	63583587	63552674	ENSG00000112245.9	+	protein_coding	KNOWN	PTP4A1	6	6	-0.187147
chr6	63548708	63549508	63549108	ENSG00000213312.3	-	processed_pseudogene	KNOWN	RPL7AP34	1	1	-0.305885
chr6	63571005	63572408	63571706	ENSG00000266680.1	-	antisense	KNOWN	RP5-1148A21.3	1	1	-0.052882
chr6	63612761	63612903	63612832	ENSG00000262651.1	-	processed_pseudogene	KNOWN	RP11-164N20.2	1	1	-0.213300
chr6	63615827	63616361	63616094	ENSG00000213309.3	-	processed_pseudogene	KNOWN	RPL9P18	1	1	-0.213300
chr6	63635820	63779336	63707578	ENSG00000118482.11	+	protein_coding	KNOWN	PHF3	12	17	-0.246913
chr6	63719980	65707225	64713602	ENSG00000188107.13	-	protein_coding	KNOWN	EYS	13	44	-0.521627
chr6	63797189	63798031	63797610	ENSG00000218813.1	+	processed_pseudogene	KNOWN	RP11-59D5__B.3	1	1	-0.129035
chr6	63806836	63822642	63814739	ENSG00000236345.1	+	antisense	KNOWN	RP11-59D5__B.2	1	2	0.010412
chr6	63857441	63857769	63857605	ENSG00000219653.1	+	processed_pseudogene	KNOWN	GCNT1P4	1	1	-0.420214
chr6	64377795	64412779	64395287	ENSG00000232120.1	+	antisense	KNOWN	RP11-349P19.1	1	4	-0.479867
chr6	64631205	64631682	64631443	ENSG00000217811.1	-	processed_pseudogene	KNOWN	HNRNPDP2	1	1	-0.592146
chr6	64728837	64733837	64731337	ENSG00000243828.2	-	transcribed_processed_pseudogene	KNOWN	RP11-307F22.2	3	2	-0.644755
chr6	64974393	64974492	64974442	ENSG00000221312.1	+	miRNA	NOVEL	AL109922.1	1	1	-0.865448
chr6	65302522	65304957	65303739	ENSG00000214558.4	+	processed_pseudogene	KNOWN	RP11-74E24.2	1	1	-1.014050
chr6	65467000	65467096	65467048	ENSG00000274061.1	+	miRNA	NOVEL	AL109612.1	1	1	-0.934160
chr6	65788417	65789287	65788852	ENSG00000220483.4	+	processed_pseudogene	KNOWN	SLC25A51P1	1	1	-0.633501
chr6	65836930	65838039	65837484	ENSG00000233859.2	-	processed_pseudogene	KNOWN	ADH5P4	1	1	-0.239852
chr6	66093431	66094909	66094170	ENSG00000218890.1	-	processed_pseudogene	KNOWN	NUFIP1P	1	1	-0.294363
chr6	66710242	66710827	66710534	ENSG00000270521.1	-	processed_pseudogene	KNOWN	RP11-24C14.1	1	1	-0.440503
chr6	66728843	66728904	66728873	ENSG00000238949.1	-	snRNA	KNOWN	RNU7-66P	1	1	-0.440503
chr6	67149509	67149599	67149554	ENSG00000266073.1	-	miRNA	NOVEL	AL590874.1	1	1	-0.757868
chr6	67210408	67210480	67210444	ENSG00000212229.1	-	snoRNA	NOVEL	SNORD65	1	1	-0.644974
chr6	67456346	67457250	67456798	ENSG00000271111.1	-	processed_pseudogene	KNOWN	RP11-409K15.1	1	1	-0.659621
chr6	67467231	67467308	67467269	ENSG00000251965.1	-	rRNA	KNOWN	RNA5SP208	1	1	-0.659621
chr6	67546651	67546754	67546702	ENSG00000201015.1	+	snRNA	KNOWN	RNU6-280P	1	1	-0.397974
chr6	67625356	67625464	67625410	ENSG00000206672.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.061359
chr6	67887646	67889339	67888492	ENSG00000227706.3	-	lincRNA	KNOWN	RP11-301G19.1	1	2	-0.207568
chr6	67933485	67934682	67934083	ENSG00000270509.1	+	processed_pseudogene	KNOWN	RP11-301G19.2	1	1	-0.727436
chr6	68055351	68060502	68057926	ENSG00000223504.1	+	lincRNA	KNOWN	RP11-542F9.1	1	2	-0.607006
chr6	68226972	68329899	68278435	ENSG00000226497.1	-	lincRNA	KNOWN	RP11-406O16.1	1	4	-0.414606
chr6	68262189	68262278	68262233	ENSG00000278564.1	-	miRNA	NOVEL	AL593844.1	1	1	-0.265902
chr6	68493439	68493526	68493482	ENSG00000266675.1	+	miRNA	NOVEL	AL606923.1	1	1	-0.570973
chr6	68598204	68598393	68598298	ENSG00000218834.1	-	processed_pseudogene	KNOWN	RP11-361F19.1	1	1	-0.400712
chr6	68629962	68635027	68632494	ENSG00000230910.2	-	antisense	KNOWN	RP3-525N10.2	3	3	-0.405646
chr6	68635367	69389511	69012439	ENSG00000135298.13	+	protein_coding	KNOWN	ADGRB3	5	32	-0.563923
chr6	69214730	69214810	69214770	ENSG00000265498.1	-	miRNA	NOVEL	AL158051.1	1	1	0.061830
chr6	69621381	69621472	69621426	ENSG00000265362.2	+	miRNA	NOVEL	AL358133.1	1	1	-0.212863
chr6	69675802	69797111	69736456	ENSG00000168216.10	-	protein_coding	KNOWN	LMBRD1	3	16	-0.309283
chr6	69705287	69706160	69705723	ENSG00000219085.1	-	processed_pseudogene	KNOWN	NPM1P37	1	1	-0.588128
chr6	69745871	69746851	69746361	ENSG00000219881.1	+	processed_pseudogene	KNOWN	GAPDHP42	1	1	-0.225037
chr6	69866571	70209976	70038273	ENSG00000082293.12	+	protein_coding	KNOWN	COL19A1	5	51	-0.447419
chr6	70098390	70098676	70098533	ENSG00000216365.2	-	processed_pseudogene	KNOWN	RPL37P15	1	1	-0.125813
chr6	70215061	70303083	70259072	ENSG00000112280.15	-	protein_coding	KNOWN	COL9A1	10	38	-0.356371
chr6	70222758	70242156	70232457	ENSG00000253809.1	+	antisense	KNOWN	RP1-149L1.1	1	2	-0.375490
chr6	70394887	70399417	70397152	ENSG00000237643.1	+	lincRNA	KNOWN	RP11-462G2.1	1	3	-0.676934
chr6	70412828	70413950	70413389	ENSG00000224349.2	-	antisense	KNOWN	RP11-462G2.2	1	2	-0.252656
chr6	70412941	70561174	70487057	ENSG00000082269.16	+	protein_coding	KNOWN	FAM135A	16	22	-0.442396
chr6	70513294	70513356	70513325	ENSG00000238386.1	+	snRNA	KNOWN	RNU7-48P	1	1	-0.697923
chr6	70566917	70589569	70578243	ENSG00000154079.5	+	protein_coding	KNOWN	SDHAF4	2	3	-0.052211
chr6	70596438	70596980	70596709	ENSG00000271967.1	+	lincRNA	KNOWN	RP11-134K13.4	1	1	-0.074200
chr6	70608234	70609334	70608784	ENSG00000232389.1	-	processed_pseudogene	KNOWN	RP11-134K13.2	1	1	-0.074200
chr6	70663502	70664279	70663890	ENSG00000218870.1	-	processed_pseudogene	KNOWN	SLC25A6P6	1	1	-0.159547
chr6	70667776	70862015	70764895	ENSG00000112305.14	+	protein_coding	KNOWN	SMAP1	6	11	-0.288570
chr6	70693839	70694619	70694229	ENSG00000262803.1	+	processed_pseudogene	KNOWN	RP11-160A9.3	1	1	-0.554371
chr6	70734503	70734962	70734732	ENSG00000217767.2	+	processed_pseudogene	KNOWN	RP11-160A9.2	1	1	0.133333
chr6	70856679	70957038	70906858	ENSG00000112309.10	-	protein_coding	KNOWN	B3GAT2	2	4	-0.290432
chr6	71075564	71076375	71075969	ENSG00000219669.1	+	processed_pseudogene	KNOWN	BECN1P2	1	1	-0.527528
chr6	71126893	71127105	71126999	ENSG00000221345.2	-	snoRNA	NOVEL	U3	1	1	-0.175941
chr6	71165076	71165770	71165423	ENSG00000218350.1	+	processed_pseudogene	KNOWN	LYPLA1P3	1	1	-0.384761
chr6	71182612	71182718	71182665	ENSG00000207180.1	+	snRNA	KNOWN	RNU6-411P	1	1	-0.673543
chr6	71221457	71328228	71274842	ENSG00000232295.7	-	processed_transcript	KNOWN	RP11-154D6.1	24	8	0.022403
chr6	71251758	71252988	71252373	ENSG00000276127.1	+	processed_pseudogene	KNOWN	RP11-154D6.2	1	1	0.027452
chr6	71288803	71308950	71298876	ENSG00000119900.7	+	protein_coding	KNOWN	OGFRL1	2	7	-0.211591
chr6	71295173	71417436	71356304	ENSG00000269966.1	-	lincRNA	KNOWN	RP3-331H24.5	1	7	-0.066794
chr6	71328942	71329806	71329374	ENSG00000230597.1	+	lincRNA	KNOWN	RP3-331H24.4	1	2	0.145234
chr6	71344344	71420769	71382556	ENSG00000233237.6	-	lincRNA	KNOWN	LINC00472	6	5	-0.101326
chr6	71373253	71375387	71374320	ENSG00000279312.1	-	TEC	KNOWN	RP3-331H24.7	1	1	-0.006975
chr6	71376933	71377045	71376989	ENSG00000199094.2	-	miRNA	KNOWN	MIR30C2	1	1	-0.006975
chr6	71386852	71390829	71388840	ENSG00000279289.1	-	TEC	KNOWN	RP3-331H24.6	1	1	-0.004698
chr6	71403551	71403621	71403586	ENSG00000207827.1	-	miRNA	KNOWN	MIR30A	1	1	0.003936
chr6	71450834	71458874	71454854	ENSG00000223765.2	+	lincRNA	KNOWN	RP1-288M22.2	1	4	0.074610
chr6	71538884	71538976	71538930	ENSG00000212099.1	-	miRNA	NOVEL	AL035467.1	1	1	-0.125365
chr6	71550958	71551643	71551300	ENSG00000219575.1	-	processed_pseudogene	KNOWN	RP1-288M22.1	1	1	-0.397974
chr6	71584721	71585906	71585313	ENSG00000218014.1	+	processed_pseudogene	KNOWN	KRT19P1	1	1	-0.234659
chr6	71585089	71585201	71585145	ENSG00000211530.1	+	miRNA	NOVEL	AL354933.1	1	1	-0.234659
chr6	71652474	71652611	71652542	ENSG00000202069.1	-	snRNA	KNOWN	RNU4-66P	1	1	-0.696504
chr6	71886703	72403143	72144923	ENSG00000079841.18	+	protein_coding	KNOWN	RIMS1	20	34	-0.292819
chr6	72316599	72317436	72317017	ENSG00000218732.1	-	processed_pseudogene	KNOWN	RP5-1046G13.2	1	1	-0.468965
chr6	72522641	72523238	72522939	ENSG00000217483.1	+	processed_pseudogene	KNOWN	RP11-135M8__A.1	1	1	-0.180380
chr6	72538579	72538669	72538624	ENSG00000274037.1	+	miRNA	NOVEL	FO393414.1	1	1	0.036344
chr6	72598451	72599634	72599042	ENSG00000181514.6	-	processed_pseudogene	KNOWN	RP3-474G15.1	1	1	-0.409069
chr6	72621792	73198851	72910321	ENSG00000185760.15	+	protein_coding	KNOWN	KCNQ5	13	16	-0.021728
chr6	72630495	72678558	72654526	ENSG00000233844.1	+	sense_intronic	KNOWN	KCNQ5-IT1	1	4	0.136062
chr6	72967687	72967753	72967720	ENSG00000266180.1	-	miRNA	KNOWN	MIR4282	1	1	0.083480
chr6	72986313	72987750	72987031	ENSG00000232422.1	+	processed_pseudogene	KNOWN	KNOP1P4	1	1	-0.130401
chr6	73055097	73055857	73055477	ENSG00000220515.2	+	processed_pseudogene	KNOWN	PGAM1P10	1	1	0.153392
chr6	73134803	73143514	73139158	ENSG00000229154.1	-	antisense	KNOWN	KCNQ5-AS1	1	5	-0.061921
chr6	73150569	73150650	73150609	ENSG00000277026.1	-	miRNA	NOVEL	AL365232.1	1	1	-0.397813
chr6	73157517	73158139	73157828	ENSG00000234025.1	-	processed_pseudogene	KNOWN	RBPMS2P1	1	1	-0.397813
chr6	73209083	73210080	73209581	ENSG00000251360.2	-	transcribed_unprocessed_pseudogene	KNOWN	KHDC1P1	1	3	0.126159
chr6	73209746	73263196	73236471	ENSG00000243501.5	-	protein_coding	KNOWN	RP11-257K9.8	1	8	0.258968
chr6	73223544	73225770	73224657	ENSG00000256980.4	-	protein_coding	KNOWN	KHDC1L	2	3	0.252883
chr6	73241314	73310365	73275839	ENSG00000135314.12	-	protein_coding	KNOWN	KHDC1	7	5	0.244154
chr6	73263008	73263084	73263046	ENSG00000263378.1	+	miRNA	NOVEL	AC019205.1	1	1	0.459501
chr6	73263215	73301401	73282308	ENSG00000229852.2	+	antisense	KNOWN	RP11-398K22.12	3	3	0.258181
chr6	73290403	73291262	73290832	ENSG00000239626.1	+	processed_pseudogene	KNOWN	RPSAP41	1	1	-0.051599
chr6	73291962	73293277	73292619	ENSG00000234882.1	+	processed_pseudogene	KNOWN	EIF3EP1	1	1	-0.051599
chr6	73322837	73323450	73323143	ENSG00000223389.1	+	processed_pseudogene	KNOWN	SDCBP2P1	1	1	0.553126
chr6	73327524	73329017	73328270	ENSG00000226840.1	+	processed_pseudogene	KNOWN	PAICSP3	1	2	0.553126
chr6	73353062	73354295	73353678	ENSG00000203909.3	-	protein_coding	KNOWN	DPPA5	1	3	0.566310
chr6	73362677	73364171	73363424	ENSG00000203908.3	+	protein_coding	KNOWN	KHDC3L	1	3	0.566310
chr6	73368555	73395133	73381844	ENSG00000203907.9	-	protein_coding	KNOWN	OOEP	3	4	0.059384
chr6	73369704	73387717	73378710	ENSG00000231332.2	+	antisense	KNOWN	OOEP-AS1	1	2	0.009630
chr6	73373108	73373263	73373185	ENSG00000235174.1	-	processed_pseudogene	KNOWN	RPL39P3	1	1	0.000361
chr6	73391038	73391767	73391402	ENSG00000224221.1	-	processed_pseudogene	KNOWN	RPS6P8	1	1	0.146735
chr6	73394748	73417569	73406158	ENSG00000080007.7	+	protein_coding	KNOWN	DDX43	3	17	0.204365
chr6	73413515	73452276	73432895	ENSG00000164430.15	-	protein_coding	KNOWN	MB21D1	3	6	0.232473
chr6	73461578	73509236	73485407	ENSG00000135297.15	+	protein_coding	KNOWN	MTO1	19	13	0.445601
chr6	73464073	73464177	73464125	ENSG00000207023.1	+	snRNA	KNOWN	RNU6-975P	1	1	0.374027
chr6	73477058	73477142	73477100	ENSG00000264609.1	+	miRNA	NOVEL	AL603910.1	1	1	0.592759
chr6	73487590	73487877	73487733	ENSG00000271986.2	-	misc_RNA	KNOWN	RN7SL827P	1	1	0.592759
chr6	73492025	73492742	73492383	ENSG00000223821.1	-	antisense	KNOWN	RP11-505P4.6	1	2	0.323939
chr6	73515750	73523797	73519773	ENSG00000156508.17	-	protein_coding	KNOWN	EEF1A1	11	10	0.494318
chr6	73523618	73570596	73547107	ENSG00000229862.5	+	antisense	KNOWN	RP11-505P4.7	2	4	0.638438
chr6	73526744	73526879	73526811	ENSG00000223967.1	-	processed_pseudogene	KNOWN	RP11-505P4.5	1	1	0.494318
chr6	73593379	73654155	73623767	ENSG00000119899.12	-	protein_coding	KNOWN	SLC17A5	2	11	0.592818
chr6	73618346	73618597	73618471	ENSG00000218459.1	+	processed_pseudogene	KNOWN	RPS27P15	1	1	0.544851
chr6	73693903	73696131	73695017	ENSG00000231652.2	-	antisense	KNOWN	RP11-553A21.3	1	2	0.461226
chr6	73695785	73828316	73762050	ENSG00000156535.13	+	protein_coding	KNOWN	CD109	4	33	0.215431
chr6	73971346	73973115	73972230	ENSG00000279790.1	+	TEC	KNOWN	RP11-374N7.2	1	1	0.143217
chr6	74004520	74004812	74004666	ENSG00000217268.1	-	processed_pseudogene	KNOWN	TXNP7	1	1	-0.250695
chr6	74069451	74690727	74380089	ENSG00000223786.1	+	lincRNA	KNOWN	RP11-554D15.1	1	4	-0.104897
chr6	74282266	74282660	74282463	ENSG00000217178.1	+	processed_pseudogene	KNOWN	RP11-9G10.1	1	1	-0.134973
chr6	74530248	74734279	74632263	ENSG00000272243.5	-	lincRNA	KNOWN	RP11-554D15.3	3	3	0.043705
chr6	74610449	74610715	74610582	ENSG00000218483.1	-	processed_pseudogene	KNOWN	RP11-554D15.2	1	1	0.091992
chr6	74642384	74652002	74647193	ENSG00000224583.1	+	lincRNA	KNOWN	RP11-554D15.4	1	2	0.067999
chr6	74719746	74719843	74719794	ENSG00000264884.1	-	miRNA	NOVEL	AL590684.1	1	1	-0.304430
chr6	74849077	74850484	74849780	ENSG00000219736.1	-	processed_pseudogene	KNOWN	RP11-560O20.1	1	1	-0.040384
chr6	75084326	75206051	75145188	ENSG00000111799.20	-	protein_coding	KNOWN	COL12A1	11	67	0.221305
chr6	75237675	75250323	75243999	ENSG00000112695.11	-	protein_coding	KNOWN	COX7A2	8	5	0.114736
chr6	75252924	75284968	75268946	ENSG00000112697.15	-	protein_coding	KNOWN	TMEM30A	4	7	0.226701
chr6	75285014	75297003	75291008	ENSG00000225793.2	+	lincRNA	KNOWN	RP1-234P15.4	3	3	0.007038
chr6	75291859	75493738	75392798	ENSG00000118407.14	-	protein_coding	KNOWN	FILIP1	4	7	-0.003800
chr6	75319101	75319980	75319540	ENSG00000203489.3	-	processed_pseudogene	KNOWN	HMGB1P39	1	1	-0.093875
chr6	75357214	75399300	75378257	ENSG00000237174.7	+	antisense	KNOWN	RP11-415D17.3	8	5	0.020013
chr6	75398860	75399067	75398963	ENSG00000221332.2	-	snoRNA	NOVEL	U3	1	1	-0.145587
chr6	75428407	75428473	75428440	ENSG00000263533.1	+	miRNA	KNOWN	MIR4463	1	1	0.316779
chr6	75454944	75458900	75456922	ENSG00000238156.1	+	lincRNA	KNOWN	RP11-415D17.4	1	4	0.127616
chr6	75465123	75465570	75465346	ENSG00000217680.1	+	processed_pseudogene	KNOWN	RP11-415D17.1	1	1	0.127616
chr6	75473738	75473894	75473816	ENSG00000201291.1	-	snRNA	KNOWN	RNU1-34P	1	1	-0.234112
chr6	75499705	75500136	75499920	ENSG00000219722.1	+	processed_pseudogene	KNOWN	RPL26P20	1	1	0.150487
chr6	75586122	75586461	75586291	ENSG00000220730.2	+	processed_pseudogene	KNOWN	RP11-474L11.3	1	1	0.261917
chr6	75593055	75593145	75593100	ENSG00000252137.1	+	snRNA	KNOWN	RNU6-1338P	1	1	0.109374
chr6	75601509	75718278	75659893	ENSG00000112701.17	+	protein_coding	KNOWN	SENP6	12	24	0.057980
chr6	75610958	75611945	75611451	ENSG00000217488.2	-	transcribed_processed_pseudogene	KNOWN	RP11-474L11.5	2	1	0.543099
chr6	75644084	75644177	75644130	ENSG00000252498.1	+	snRNA	KNOWN	RNU6-1016P	1	1	-0.247318
chr6	75654970	75655299	75655134	ENSG00000200091.1	-	misc_RNA	KNOWN	RN7SKP163	1	1	0.065520
chr6	75749192	75919537	75834364	ENSG00000196586.13	+	protein_coding	KNOWN	MYO6	8	36	-0.156200
chr6	75768059	75768158	75768108	ENSG00000252156.1	-	snRNA	KNOWN	RNU6-155P	1	1	0.181934
chr6	75865239	75865335	75865287	ENSG00000223169.1	-	rRNA	KNOWN	RNA5SP209	1	1	-0.173062
chr6	75921115	76072678	75996896	ENSG00000112706.11	-	protein_coding	KNOWN	IMPG1	4	17	-0.324175
chr6	75928513	75928625	75928569	ENSG00000200040.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.188745
chr6	76092834	76092940	76092887	ENSG00000222652.1	+	snRNA	KNOWN	RNU6-248P	1	1	-0.181459
chr6	76446988	76447089	76447038	ENSG00000238697.1	-	snRNA	KNOWN	RNU6-261P	1	1	-0.463069
chr6	76522451	76593623	76558037	ENSG00000236635.2	-	lincRNA	KNOWN	RP11-35J1.1	1	3	-0.589701
chr6	76557653	76557754	76557703	ENSG00000272445.1	-	snRNA	KNOWN	RNU6-84P	1	1	-0.765497
chr6	76561328	76562590	76561959	ENSG00000280511.1	+	lincRNA	KNOWN	RP11-35J1.2	1	2	-0.765497
chr6	76660486	76662770	76661628	ENSG00000231762.1	+	processed_pseudogene	KNOWN	RP11-354K4.1	1	1	-0.480147
chr6	76774983	76775860	76775421	ENSG00000271945.1	+	lincRNA	KNOWN	RP11-354K4.2	1	2	-0.541880
chr6	77343557	77343654	77343605	ENSG00000276064.1	+	processed_pseudogene	KNOWN	RP11-274E6.1	1	1	-0.168660
chr6	77462205	77463464	77462834	ENSG00000135312.5	-	protein_coding	KNOWN	HTR1B	1	1	-0.406348
chr6	77496119	77496671	77496395	ENSG00000219253.1	+	processed_pseudogene	KNOWN	RPS6P7	1	1	-0.567933
chr6	77690658	77926974	77808816	ENSG00000269964.2	+	protein_coding	KNOWN	MEI4	1	4	-0.468062
chr6	78604467	78606036	78605251	ENSG00000230309.1	-	lincRNA	KNOWN	RP3-390M24.1	1	2	-0.075118
chr6	78809715	78813303	78811509	ENSG00000229495.1	-	lincRNA	KNOWN	RP11-173D14.3	1	2	-0.228059
chr6	78867472	78946440	78906956	ENSG00000146243.13	+	protein_coding	KNOWN	IRAK1BP1	4	5	-0.330971
chr6	78909249	78909312	78909280	ENSG00000275100.1	-	miRNA	NOVEL	AL450327.1	1	1	-0.326234
chr6	78935867	79078236	79007051	ENSG00000146247.13	-	protein_coding	KNOWN	PHIP	2	40	-0.291157
chr6	79067692	79068138	79067915	ENSG00000217512.1	-	processed_pseudogene	KNOWN	RP11-477E3.2	1	1	-0.522983
chr6	79201245	79234738	79217991	ENSG00000118418.14	-	protein_coding	KNOWN	HMGN3	3	7	-0.174852
chr6	79233718	79236797	79235257	ENSG00000270362.1	+	antisense	KNOWN	HMGN3-AS1	1	2	-0.185303
chr6	79278105	79278427	79278266	ENSG00000220154.2	-	processed_pseudogene	KNOWN	RP11-46B11.2	1	1	-0.356154
chr6	79301963	79302066	79302014	ENSG00000201464.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.397046
chr6	79326568	79327207	79326887	ENSG00000217786.1	-	processed_pseudogene	KNOWN	RP3-508D13.1	1	1	-0.216130
chr6	79354443	79354713	79354578	ENSG00000218029.3	-	processed_pseudogene	KNOWN	RP1-232L24.2	1	1	-0.506146
chr6	79406240	79406774	79406507	ENSG00000262048.1	-	processed_pseudogene	KNOWN	RP1-232L24.4	1	1	-0.171043
chr6	79420297	79421305	79420801	ENSG00000231533.1	+	lincRNA	KNOWN	RP1-232L24.3	1	3	-0.346129
chr6	79436908	79437167	79437037	ENSG00000218748.1	-	processed_pseudogene	KNOWN	DBIP1	1	1	-0.402773
chr6	79484991	79537458	79511224	ENSG00000135338.13	-	protein_coding	KNOWN	LCA5	3	9	-0.470089
chr6	79552794	79553160	79552977	ENSG00000261970.1	+	processed_pseudogene	KNOWN	RP11-342L8.2	1	1	0.054759
chr6	79561132	79561602	79561367	ENSG00000272137.1	+	lincRNA	KNOWN	RP11-177G23.2	1	1	0.054759
chr6	79573877	79575530	79574703	ENSG00000279659.1	+	TEC	KNOWN	RP11-177G23.1	1	1	-0.328459
chr6	79631283	79703659	79667471	ENSG00000198478.7	+	protein_coding	KNOWN	SH3BGRL2	1	4	-0.179663
chr6	79803583	79807225	79805404	ENSG00000235357.1	-	lincRNA	KNOWN	LINC01621	1	3	-0.396397
chr6	79826793	79826885	79826839	ENSG00000221470.1	-	miRNA	NOVEL	AL132875.1	1	1	-0.154169
chr6	79854684	79855632	79855158	ENSG00000220918.1	+	processed_pseudogene	KNOWN	RP1-92C4.1	1	1	-0.295669
chr6	79871873	79874610	79873241	ENSG00000233835.1	+	lincRNA	KNOWN	RP1-92C4.2	1	2	-0.739611
chr6	79914812	79947580	79931196	ENSG00000118402.5	-	protein_coding	KNOWN	ELOVL4	1	6	-0.163336
chr6	79953005	79954011	79953508	ENSG00000218582.2	-	processed_pseudogene	KNOWN	GAPDHP63	1	1	-0.093564
chr6	79964215	79964519	79964367	ENSG00000220311.1	+	processed_pseudogene	KNOWN	RPL35AP18	1	1	-0.093564
chr6	80001402	80001907	80001654	ENSG00000281602.1	-	protein_coding	KNOWN	AL133475.1	1	3	-0.192217
chr6	80003887	80042527	80023207	ENSG00000112742.9	+	protein_coding	KNOWN	TTK	11	22	-0.320107
chr6	80064286	80070199	80067242	ENSG00000218418.2	-	processed_pseudogene	KNOWN	RP11-296E7.1	1	1	-0.274449
chr6	80077729	80078362	80078045	ENSG00000217377.1	-	processed_pseudogene	KNOWN	AK4P5	1	1	-0.271647
chr6	80106647	80346270	80226458	ENSG00000083123.14	+	protein_coding	KNOWN	BCKDHB	6	11	-0.227753
chr6	80355424	80356859	80356141	ENSG00000272129.1	+	lincRNA	KNOWN	RP11-250B2.6	1	1	0.044686
chr6	80374015	80374569	80374292	ENSG00000219547.1	-	processed_pseudogene	KNOWN	RPL17P25	1	1	-0.040112
chr6	80440730	80441172	80440951	ENSG00000279022.1	+	TEC	KNOWN	RP11-250B2.4	1	1	-0.166470
chr6	80443344	80465927	80454635	ENSG00000233967.6	+	lincRNA	KNOWN	RP11-250B2.3	3	4	0.040797
chr6	80466958	80469080	80468019	ENSG00000260645.1	+	lincRNA	KNOWN	RP11-250B2.5	1	1	0.127397
chr6	80470071	80470428	80470249	ENSG00000219361.1	-	processed_pseudogene	KNOWN	RPSAP72	1	1	-0.251963
chr6	80499196	80499392	80499294	ENSG00000181705.2	-	processed_pseudogene	KNOWN	RP11-11L12.2	1	1	0.128986
chr6	80555841	80557189	80556515	ENSG00000216352.1	-	processed_pseudogene	KNOWN	RP11-486E2.1	1	1	0.061295
chr6	81491439	81752774	81622106	ENSG00000112773.15	-	protein_coding	KNOWN	FAM46A	5	3	-0.273543
chr6	81527102	81534915	81531008	ENSG00000226089.2	-	sense_intronic	KNOWN	RP1-300G12.2	2	3	-0.246680
chr6	81551686	81554092	81552889	ENSG00000277797.1	+	lincRNA	KNOWN	RP11-244G12.1	1	1	-0.409069
chr6	81622200	81622319	81622259	ENSG00000212336.1	+	rRNA	KNOWN	RNA5SP210	1	1	-0.581198
chr6	81724722	81736353	81730537	ENSG00000232031.1	-	sense_intronic	KNOWN	RP5-991C6.4	1	4	-0.195431
chr6	81764024	81764156	81764090	ENSG00000206886.1	+	snoRNA	NOVEL	SNORA70	1	1	0.157955
chr6	81764211	81764503	81764357	ENSG00000219702.1	+	processed_pseudogene	KNOWN	RP5-991C6.2	1	1	0.157955
chr6	81813286	81814157	81813721	ENSG00000224995.1	-	lincRNA	KNOWN	LINC01526	1	2	-0.150284
chr6	81845185	81933480	81889332	ENSG00000226453.1	-	lincRNA	KNOWN	RP11-379B8.1	1	3	-0.034690
chr6	81950224	81950338	81950281	ENSG00000281694.1	-	miRNA	NOVEL	AL360157.1	1	1	0.024529
chr6	81969453	81969539	81969496	ENSG00000260574.1	-	lincRNA	KNOWN	RP11-801I18.1	1	1	0.024529
chr6	82169983	82247754	82208868	ENSG00000005700.14	-	protein_coding	KNOWN	IBTK	10	29	-0.285148
chr6	82210338	82210440	82210389	ENSG00000223044.1	-	snRNA	KNOWN	RNU6-130P	1	1	-0.413536
chr6	82263996	82264974	82264485	ENSG00000220537.1	-	processed_pseudogene	KNOWN	RP3-492P14.2	1	1	-0.124217
chr6	82363206	82370828	82367017	ENSG00000146242.8	+	protein_coding	KNOWN	TPBG	3	3	-0.249031
chr6	82892398	83065841	82979119	ENSG00000118420.16	-	protein_coding	KNOWN	UBE3D	8	11	-0.072207
chr6	82924829	82925122	82924975	ENSG00000220091.2	-	processed_pseudogene	KNOWN	LAP3P1	1	1	-0.026886
chr6	82932601	82938677	82935639	ENSG00000227215.1	+	antisense	KNOWN	RP11-445L13__B.3	1	2	-0.304767
chr6	83067666	83171350	83119508	ENSG00000083097.14	+	protein_coding	KNOWN	DOPEY1	7	40	-0.060446
chr6	83072973	83073135	83073054	ENSG00000281446.1	+	protein_coding	KNOWN	AL139333.1	1	2	0.127397
chr6	83161150	83193936	83177543	ENSG00000013375.15	-	protein_coding	KNOWN	PGM3	15	14	0.044828
chr6	83193379	83198932	83196155	ENSG00000013392.7	+	protein_coding	KNOWN	RWDD2A	1	3	0.180430
chr6	83210389	83431071	83320730	ENSG00000065833.8	-	protein_coding	KNOWN	ME1	1	14	-0.143880
chr6	83367706	83367791	83367748	ENSG00000252309.1	+	miRNA	NOVEL	AL391416.1	1	1	-0.164107
chr6	83392416	83393409	83392912	ENSG00000219951.4	+	processed_pseudogene	KNOWN	RP11-378G13.2	1	1	-0.335429
chr6	83512538	83525704	83519121	ENSG00000146250.6	+	protein_coding	KNOWN	PRSS35	1	2	0.223236
chr6	83552880	83709691	83631285	ENSG00000065609.14	-	protein_coding	KNOWN	SNAP91	22	30	-0.291166
chr6	83728055	83736525	83732290	ENSG00000237874.2	+	lincRNA	KNOWN	RP3-393K13.1	1	2	-0.597496
chr6	83853266	83857515	83855390	ENSG00000203877.8	+	protein_coding	KNOWN	RIPPLY2	3	4	-0.623031
chr6	83859643	83967424	83913533	ENSG00000065615.13	+	protein_coding	KNOWN	CYB5R4	3	16	-0.312259
chr6	83983728	84007323	83995525	ENSG00000228679.1	+	lincRNA	KNOWN	RP4-676J13.2	1	4	-0.242863
chr6	84023055	84024553	84023804	ENSG00000230852.1	+	lincRNA	KNOWN	RP11-51G5.1	1	2	-0.169336
chr6	84033756	84090881	84062318	ENSG00000135324.5	+	protein_coding	KNOWN	MRAP2	1	4	-0.036257
chr6	84124241	84227635	84175938	ENSG00000135315.11	-	protein_coding	KNOWN	CEP162	7	27	-0.420043
chr6	84421028	84556152	84488590	ENSG00000231776.5	-	lincRNA	KNOWN	LINC01611	3	4	-0.272258
chr6	84429584	84430802	84430193	ENSG00000226309.1	-	processed_pseudogene	KNOWN	SMARCE1P2	1	1	-0.371614
chr6	84687351	84764519	84725935	ENSG00000112837.16	-	protein_coding	KNOWN	TBX18	7	9	-0.123341
chr6	84687712	84709578	84698645	ENSG00000228290.6	+	antisense	KNOWN	RP11-132M7.3	11	5	-0.258369
chr6	84689292	84689429	84689360	ENSG00000219604.1	-	processed_pseudogene	KNOWN	RP11-132M7.2	1	1	-0.131904
chr6	84966397	84966625	84966511	ENSG00000216523.1	-	processed_pseudogene	KNOWN	RP3-435K13.1	1	1	-0.540637
chr6	85155667	85167749	85161708	ENSG00000220291.1	+	unprocessed_pseudogene	KNOWN	RP3-455E7.1	1	6	-0.336245
chr6	85257328	85257694	85257511	ENSG00000216902.3	+	processed_pseudogene	KNOWN	RP1-161C16.1	1	1	-0.294425
chr6	85286076	85290849	85288462	ENSG00000217060.1	+	unprocessed_pseudogene	KNOWN	RP11-30P6.1	1	5	-0.422919
chr6	85287789	85289007	85288398	ENSG00000213211.2	+	processed_pseudogene	KNOWN	KRT18P64	1	1	-0.437688
chr6	85387219	85390186	85388702	ENSG00000234155.1	-	lincRNA	KNOWN	RP11-30P6.6	1	2	0.014464
chr6	85426657	85427125	85426891	ENSG00000216439.1	-	processed_pseudogene	KNOWN	DUTP5	1	1	0.378110
chr6	85427453	85427966	85427709	ENSG00000214460.3	-	processed_pseudogene	KNOWN	TPT1P6	1	1	0.378110
chr6	85449584	85495791	85472687	ENSG00000135318.11	+	protein_coding	KNOWN	NT5E	5	9	0.150975
chr6	85498441	85499058	85498749	ENSG00000280232.1	-	TEC	KNOWN	RP11-321N4.4	1	1	0.186988
chr6	85505496	85594156	85549826	ENSG00000135317.12	-	protein_coding	KNOWN	SNX14	19	29	-0.028134
chr6	85557978	85615234	85586606	ENSG00000271793.1	-	protein_coding	KNOWN	RP11-321N4.5	1	8	0.069971
chr6	85607785	85643792	85625788	ENSG00000135316.17	-	protein_coding	KNOWN	SYNCRIP	4	12	0.330311
chr6	85659892	85660606	85660249	ENSG00000220563.1	-	processed_pseudogene	KNOWN	PKMP3	1	1	0.308803
chr6	85660950	85678736	85669843	ENSG00000203875.10	-	processed_transcript	KNOWN	SNHG5	22	7	0.339896
chr6	85677294	85677368	85677331	ENSG00000281147.1	-	snoRNA	KNOWN	SNORD50A	1	1	0.372100
chr6	85677589	85677658	85677623	ENSG00000275072.1	-	snoRNA	KNOWN	SNORD50B	1	1	0.372100
chr6	85731371	85732011	85731691	ENSG00000217334.1	+	processed_pseudogene	KNOWN	RP11-33E24.3	1	1	-0.627900
chr6	85735744	85735921	85735832	ENSG00000198738.4	-	processed_pseudogene	KNOWN	SMIM11P1	1	1	-0.627900
chr6	85751581	85751753	85751667	ENSG00000222686.1	+	snRNA	KNOWN	RNU4-72P	1	1	-0.079694
chr6	85777639	85777755	85777697	ENSG00000200427.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.463069
chr6	85868953	85869464	85869208	ENSG00000218766.1	+	processed_pseudogene	KNOWN	RP11-207F8.1	1	1	-0.328340
chr6	85993021	85993159	85993090	ENSG00000202103.1	-	snRNA	KNOWN	RNU4-12P	1	1	-0.299330
chr6	86086415	86087134	86086774	ENSG00000220069.1	-	processed_pseudogene	KNOWN	RPL7P27	1	1	-0.173150
chr6	86170447	86171018	86170732	ENSG00000217272.1	-	processed_pseudogene	KNOWN	RP1-263J7.2	1	1	-0.185236
chr6	86214237	86214576	86214406	ENSG00000220831.4	-	processed_pseudogene	KNOWN	NDUFA5P9	1	1	-0.429961
chr6	86432244	86432669	86432456	ENSG00000219500.1	+	processed_pseudogene	KNOWN	RP11-15J23.1	1	1	-0.376395
chr6	86435848	86436138	86435993	ENSG00000243124.3	+	misc_RNA	KNOWN	RN7SL643P	1	1	-0.376395
chr6	86729708	86730108	86729908	ENSG00000218561.1	-	processed_pseudogene	KNOWN	RP1-253B10.1	1	1	-0.222325
chr6	86768522	86768932	86768727	ENSG00000219190.1	-	processed_pseudogene	KNOWN	RP1-253B10.2	1	1	-0.367440
chr6	86897118	86897421	86897269	ENSG00000217769.4	+	processed_pseudogene	KNOWN	RP11-76H14.2	1	1	-0.397813
chr6	86897547	86897683	86897615	ENSG00000220240.1	+	unprocessed_pseudogene	KNOWN	RP11-76H14.5	1	1	-0.397813
chr6	86937306	87016683	86976994	ENSG00000168830.7	+	protein_coding	KNOWN	HTR1E	1	2	-0.195434
chr6	86970466	86971193	86970829	ENSG00000214457.3	+	processed_pseudogene	KNOWN	RPL7P29	1	1	-0.165806
chr6	87000045	87000291	87000168	ENSG00000217169.2	-	processed_pseudogene	KNOWN	MTHFD2P2	1	1	-0.273293
chr6	87070156	87070461	87070308	ENSG00000217776.1	-	processed_pseudogene	KNOWN	RP11-156F23.2	1	1	-0.202456
chr6	87083233	87083536	87083384	ENSG00000252697.1	+	misc_RNA	KNOWN	RN7SKP209	1	1	-0.202456
chr6	87085498	87095406	87090452	ENSG00000135346.8	-	protein_coding	KNOWN	CGA	6	5	-0.263328
chr6	87121693	87122688	87122190	ENSG00000215477.2	-	processed_pseudogene	KNOWN	RCN1P1	1	1	-0.391758
chr6	87151159	87155285	87153222	ENSG00000272008.1	-	antisense	KNOWN	RP11-393I2.4	1	1	0.057640
chr6	87152833	87264196	87208514	ENSG00000188994.12	+	protein_coding	KNOWN	ZNF292	9	8	-0.093044
chr6	87173368	87174303	87173835	ENSG00000218313.1	-	processed_pseudogene	KNOWN	RP11-393I2.2	1	1	-0.034226
chr6	87282978	87329278	87306128	ENSG00000164411.10	-	protein_coding	KNOWN	GJB7	4	3	-0.188222
chr6	87298772	87300447	87299609	ENSG00000216990.2	+	processed_pseudogene	KNOWN	HSPD1P10	1	1	-0.075118
chr6	87322583	87399749	87361166	ENSG00000111850.10	+	protein_coding	KNOWN	SMIM8	9	8	-0.220418
chr6	87344849	87365463	87355156	ENSG00000203872.6	+	protein_coding	KNOWN	C6orf163	4	5	-0.318436
chr6	87356831	87358605	87357718	ENSG00000279616.1	+	TEC	KNOWN	RP1-102H19.7	1	1	-0.244190
chr6	87407983	87464465	87436224	ENSG00000272514.5	+	protein_coding	KNOWN	CFAP206	4	13	-0.380817
chr6	87408012	87511634	87459823	ENSG00000213204.8	+	protein_coding	KNOWN	RP3-382I10.7	3	16	-0.287943
chr6	87425795	87426088	87425941	ENSG00000216324.1	-	processed_pseudogene	KNOWN	RP3-382I10.2	1	1	-0.432535
chr6	87441165	87442146	87441655	ENSG00000218793.1	-	processed_pseudogene	KNOWN	RP3-382I10.3	1	1	-0.297050
chr6	87444395	87445175	87444785	ENSG00000218698.1	-	processed_pseudogene	KNOWN	ST13P16	1	1	-0.297050
chr6	87470623	87512336	87491479	ENSG00000164414.16	+	protein_coding	KNOWN	SLC35A1	6	8	-0.132324
chr6	87488445	87488552	87488498	ENSG00000206715.1	+	snRNA	KNOWN	RNU6-444P	1	1	-0.456071
chr6	87514378	87590003	87552190	ENSG00000146282.17	-	protein_coding	KNOWN	RARS2	4	20	0.050714
chr6	87590067	87667453	87628760	ENSG00000135336.14	+	protein_coding	KNOWN	ORC3	6	20	0.156908
chr6	87675072	87702209	87688640	ENSG00000135334.8	-	protein_coding	KNOWN	AKIRIN2	2	5	0.273183
chr6	87720915	87721018	87720966	ENSG00000238628.1	+	snoRNA	NOVEL	snoU13	1	1	0.232473
chr6	87826173	87826285	87826229	ENSG00000207131.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.222839
chr6	87845650	87845947	87845798	ENSG00000240997.3	+	misc_RNA	KNOWN	RN7SL183P	1	1	-0.305885
chr6	87847542	87847638	87847590	ENSG00000265585.2	+	miRNA	NOVEL	AL138919.1	1	1	-0.305885
chr6	87891424	87891869	87891646	ENSG00000271114.1	+	processed_pseudogene	KNOWN	RP11-453D21.1	1	1	-0.552349
chr6	88047789	88066832	88057310	ENSG00000118434.8	+	protein_coding	KNOWN	SPACA1	3	7	-0.472815
chr6	88139864	88166359	88153111	ENSG00000118432.12	-	protein_coding	KNOWN	CNR1	7	4	-0.268344
chr6	88172261	88175762	88174011	ENSG00000279565.1	+	TEC	KNOWN	RP4-570O12.3	1	1	-0.518441
chr6	88265158	88265511	88265334	ENSG00000220131.1	+	processed_pseudogene	KNOWN	RP4-570O12.2	1	1	-0.245878
chr6	88275882	88276989	88276435	ENSG00000220267.1	-	processed_pseudogene	KNOWN	ACTBP8	1	1	-0.048016
chr6	88276125	88276208	88276166	ENSG00000281199.1	-	miRNA	NOVEL	AL139042.1	1	1	-0.048016
chr6	88298950	88421033	88359991	ENSG00000234426.1	-	lincRNA	KNOWN	RP11-459O1.2	1	3	-0.316493
chr6	88610272	88963721	88786996	ENSG00000111880.15	-	protein_coding	KNOWN	RNGTT	4	16	-0.296245
chr6	88714242	88714430	88714336	ENSG00000222145.1	-	snoRNA	NOVEL	SNORA73	1	1	-0.174523
chr6	88964527	88966587	88965557	ENSG00000280277.1	+	TEC	KNOWN	RP1-72A23.4	1	1	-0.060011
chr6	89001548	89001814	89001681	ENSG00000220130.1	+	processed_pseudogene	KNOWN	RP1-72A23.3	1	1	-0.233679
chr6	89059628	89060109	89059868	ENSG00000220960.1	+	processed_pseudogene	KNOWN	RP1-72A23.1	1	1	-0.267089
chr6	89063500	89063690	89063595	ENSG00000223001.1	-	snRNA	KNOWN	RNU2-61P	1	1	-0.267089
chr6	89080164	89080667	89080415	ENSG00000271931.1	-	antisense	KNOWN	RP11-63L7.5	1	1	0.135846
chr6	89080751	89085160	89082955	ENSG00000146278.10	+	protein_coding	KNOWN	PNRC1	3	2	0.135846
chr6	89090946	89091242	89091094	ENSG00000264017.2	+	misc_RNA	KNOWN	RN7SL336P	1	1	-0.069896
chr6	89095959	89118081	89107020	ENSG00000154548.8	-	protein_coding	KNOWN	SRSF12	5	5	-0.092001
chr6	89146050	89165565	89155807	ENSG00000146281.5	+	protein_coding	KNOWN	PM20D2	1	7	-0.039307
chr6	89176543	89176677	89176610	ENSG00000281765.1	-	miRNA	NOVEL	AL353135.1	1	1	-0.355467
chr6	89177501	89231278	89204389	ENSG00000146276.11	-	protein_coding	KNOWN	GABRR1	7	12	-0.122269
chr6	89257208	89315299	89286253	ENSG00000111886.10	-	protein_coding	KNOWN	GABRR2	3	9	-0.006155
chr6	89301783	89303114	89302448	ENSG00000220418.1	+	processed_pseudogene	KNOWN	TUBB3P1	1	1	0.123356
chr6	89326625	89352848	89339736	ENSG00000198833.6	-	protein_coding	KNOWN	UBE2J1	1	8	-0.074712
chr6	89364636	89412270	89388453	ENSG00000025039.14	-	protein_coding	KNOWN	RRAGD	3	7	-0.089829
chr6	89422099	89423048	89422573	ENSG00000218965.1	-	processed_pseudogene	KNOWN	NACAP7	1	2	0.001226
chr6	89433170	89633834	89533502	ENSG00000135299.16	+	protein_coding	KNOWN	ANKRD6	22	16	-0.009071
chr6	89478141	89478433	89478287	ENSG00000239316.3	+	misc_RNA	KNOWN	RN7SL11P	1	1	0.190172
chr6	89560875	89567044	89563959	ENSG00000237027.1	-	antisense	KNOWN	RP11-16C18.3	2	3	0.016264
chr6	89568144	89638753	89603448	ENSG00000083099.10	-	protein_coding	KNOWN	LYRM2	11	6	0.039169
chr6	89642499	89819723	89731111	ENSG00000112159.11	-	protein_coding	KNOWN	MDN1	5	102	0.146570
chr6	89673469	89675783	89674626	ENSG00000228124.1	+	antisense	KNOWN	RP1-122O8.7	1	2	0.398653
chr6	89797598	89797877	89797737	ENSG00000220871.1	+	processed_pseudogene	KNOWN	DNAJC19P6	1	1	0.285716
chr6	89814709	89815463	89815086	ENSG00000217653.1	+	processed_pseudogene	KNOWN	RP11-63K6.1	1	1	0.164343
chr6	89829894	89874436	89852165	ENSG00000118412.12	+	protein_coding	KNOWN	CASP8AP2	6	10	0.347010
chr6	89841329	89841424	89841376	ENSG00000199630.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.519163
chr6	89876544	89876878	89876711	ENSG00000218300.1	+	processed_pseudogene	KNOWN	RP11-63K6.4	1	1	-0.240328
chr6	89886156	89887848	89887002	ENSG00000219240.2	+	processed_pseudogene	KNOWN	RP11-63K6.5	1	2	-0.240328
chr6	89894469	89896120	89895294	ENSG00000135355.3	+	protein_coding	KNOWN	GJA10	1	1	-0.000037
chr6	89898283	89898392	89898337	ENSG00000252891.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.000037
chr6	89920196	89921760	89920978	ENSG00000232532.1	+	antisense	KNOWN	RP11-63K6.7	1	2	-0.198305
chr6	89926529	90296908	90111718	ENSG00000112182.14	-	protein_coding	KNOWN	BACH2	10	9	-0.201414
chr6	89950116	89953186	89951651	ENSG00000226455.1	+	antisense	KNOWN	RP3-512E2.2	2	3	0.100259
chr6	90001222	90001506	90001364	ENSG00000222078.1	-	misc_RNA	KNOWN	RN7SKP110	1	1	-0.012539
chr6	90116700	90117105	90116902	ENSG00000218730.1	-	processed_pseudogene	KNOWN	RP3-453I5.2	1	1	-0.299776
chr6	90312742	90312833	90312787	ENSG00000266760.1	+	miRNA	KNOWN	MIR4464	1	1	-0.100653
chr6	90345219	90362632	90353925	ENSG00000260271.1	+	lincRNA	KNOWN	RP1-45N11.1	1	6	-0.495756
chr6	90446772	90446846	90446809	ENSG00000252676.1	+	miRNA	NOVEL	AL391559.1	1	1	-0.301351
chr6	90513573	90587045	90550309	ENSG00000135341.17	-	protein_coding	KNOWN	MAP3K7	6	17	-0.148754
chr6	91390313	91393000	91391656	ENSG00000224605.1	-	lincRNA	KNOWN	RP1-177I10.1	1	3	-0.497297
chr6	91521660	91521737	91521698	ENSG00000263734.1	+	miRNA	KNOWN	MIR4643	1	1	-0.662356
chr6	91629915	91690428	91660171	ENSG00000224944.1	-	lincRNA	KNOWN	CASC6	1	4	-0.652044
chr6	91726810	91727070	91726940	ENSG00000262095.1	+	processed_pseudogene	KNOWN	RP3-433F14.4	1	1	-0.632374
chr6	91727159	91727324	91727241	ENSG00000219087.2	+	processed_pseudogene	KNOWN	MTND4LP19	1	1	-0.632374
chr6	91727282	91727505	91727393	ENSG00000220340.1	-	processed_pseudogene	KNOWN	RP3-433F14.1	1	1	-0.632374
chr6	91739609	91739897	91739753	ENSG00000240961.3	+	misc_RNA	KNOWN	RN7SL415P	1	1	-0.393435
chr6	91815843	91816428	91816135	ENSG00000219867.1	-	processed_pseudogene	KNOWN	RP11-40G16.1	1	1	-0.712752
chr6	92013842	92014734	92014288	ENSG00000220553.1	+	processed_pseudogene	KNOWN	RPL5P19	1	1	-0.155389
chr6	92119423	92119633	92119528	ENSG00000200492.2	+	snoRNA	NOVEL	U3	1	1	-0.757674
chr6	92387841	92388827	92388334	ENSG00000261038.1	-	lincRNA	KNOWN	RP1-149C7.1	1	1	-0.955943
chr6	92644741	92644808	92644774	ENSG00000265419.1	+	miRNA	NOVEL	AL359987.1	1	1	-0.783918
chr6	92723003	92723829	92723416	ENSG00000220908.2	-	lincRNA	KNOWN	RP11-127B16.1	1	2	-0.599255
chr6	92790453	92790665	92790559	ENSG00000221455.2	+	snoRNA	NOVEL	U3	1	1	-0.766964
chr6	92812045	92812171	92812108	ENSG00000238412.2	+	miRNA	NOVEL	AL589947.1	1	1	-0.505249
chr6	92887251	92888581	92887916	ENSG00000219387.2	-	processed_pseudogene	KNOWN	ATF1P1	1	2	-1.047283
chr6	93070387	93103384	93086885	ENSG00000235099.1	+	lincRNA	KNOWN	RP1-23E21.2	1	2	-0.405225
chr6	93091976	93092760	93092368	ENSG00000213187.3	-	processed_pseudogene	KNOWN	COPS5P1	1	1	-0.303417
chr6	93240020	93419547	93329783	ENSG00000135333.13	-	protein_coding	KNOWN	EPHA7	2	17	-0.718213
chr6	93811825	93813036	93812430	ENSG00000280451.1	+	TEC	KNOWN	RP11-64I5.1	1	1	-0.622099
chr6	93879106	93879229	93879167	ENSG00000252249.1	+	snoRNA	NOVEL	SNORA18	1	1	-0.385167
chr6	93886900	93889410	93888155	ENSG00000229600.1	+	lincRNA	KNOWN	RP11-524K14.1	1	2	-0.385167
chr6	94163920	94194658	94179289	ENSG00000231143.1	+	lincRNA	KNOWN	RP3-463P15.1	1	2	-0.503430
chr6	94344737	94344962	94344849	ENSG00000220370.1	+	processed_pseudogene	KNOWN	RP3-399J4.2	1	1	-0.577860
chr6	94397664	94398829	94398246	ENSG00000279403.1	+	TEC	KNOWN	RP3-399J4.3	1	1	-0.719936
chr6	94442030	94443809	94442919	ENSG00000270484.1	-	processed_pseudogene	KNOWN	RP3-399J4.4	1	1	-0.797305
chr6	94446740	94447179	94446959	ENSG00000216853.1	-	processed_pseudogene	KNOWN	RP3-399J4.1	1	1	-0.797305
chr6	95504182	95504496	95504339	ENSG00000219627.1	+	processed_pseudogene	KNOWN	CYCSP17	1	1	-0.411899
chr6	95575183	95577450	95576316	ENSG00000261366.1	-	antisense	KNOWN	MANEA-AS1	1	1	-0.418492
chr6	95577543	95609457	95593500	ENSG00000172469.14	+	protein_coding	KNOWN	MANEA	4	5	-0.556578
chr6	95630115	95632929	95631522	ENSG00000219549.1	-	processed_pseudogene	KNOWN	RP11-374I15.1	1	2	-0.513036
chr6	95991107	95992349	95991728	ENSG00000219941.1	+	processed_pseudogene	KNOWN	KRT18P50	1	1	-0.441440
chr6	96015984	96215612	96115798	ENSG00000172461.10	+	protein_coding	KNOWN	FUT9	2	3	-0.615077
chr6	96282567	96282863	96282715	ENSG00000242560.3	+	misc_RNA	KNOWN	RN7SL797P	1	1	-0.218348
chr6	96358374	96521669	96440021	ENSG00000233797.1	-	antisense	KNOWN	UFL1-AS1	1	7	-0.479711
chr6	96521595	96555276	96538435	ENSG00000014123.9	+	protein_coding	KNOWN	UFL1	2	19	-0.399173
chr6	96562548	96616636	96589592	ENSG00000112214.10	+	protein_coding	KNOWN	FHL5	3	7	-0.443794
chr6	96648489	96649069	96648779	ENSG00000213183.3	-	processed_pseudogene	KNOWN	RPS7P8	1	1	-0.620726
chr6	96649453	96649591	96649522	ENSG00000207309.1	-	snRNA	KNOWN	RNU4-70P	1	1	-0.620726
chr6	96653274	96654142	96653708	ENSG00000219139.1	+	processed_pseudogene	KNOWN	RP11-304C16.2	1	1	-0.440119
chr6	96672129	96672969	96672549	ENSG00000217331.1	-	processed_pseudogene	KNOWN	RP11-304C16.3	1	1	-0.672719
chr6	96750824	96751728	96751276	ENSG00000216518.1	+	processed_pseudogene	KNOWN	EEF1GP6	1	1	-0.496694
chr6	96785137	96795821	96790479	ENSG00000224384.1	+	antisense	KNOWN	RP3-417O22.3	1	3	-0.217839
chr6	96794126	96837463	96815794	ENSG00000112218.8	-	protein_coding	KNOWN	GPR63	1	2	-0.249623
chr6	96889313	96897881	96893597	ENSG00000123545.5	-	protein_coding	KNOWN	NDUFAF4	3	4	-0.487899
chr6	96914699	96914995	96914847	ENSG00000263479.2	-	misc_RNA	KNOWN	RN7SL509P	1	1	-0.323046
chr6	96924620	97140754	97032687	ENSG00000186231.16	+	protein_coding	KNOWN	KLHL32	7	11	-0.415473
chr6	97142161	97283217	97212689	ENSG00000146263.11	-	protein_coding	KNOWN	MMS22L	12	25	-0.494718
chr6	97283303	98399872	97841587	ENSG00000271860.6	+	lincRNA	KNOWN	RP11-436D23.1	9	8	-0.625406
chr6	97710953	97717197	97714075	ENSG00000226207.1	-	lincRNA	KNOWN	RP1-104O17.3	1	3	-0.663386
chr6	98024531	98024621	98024576	ENSG00000238367.1	+	miRNA	KNOWN	MIR2113	1	1	-0.890521
chr6	98179499	98179832	98179665	ENSG00000220505.2	-	processed_pseudogene	KNOWN	EIF4EBP2P3	1	1	-0.484797
chr6	98210020	98214683	98212351	ENSG00000236920.2	-	lincRNA	KNOWN	RP11-111D3.2	1	2	-0.566392
chr6	98780257	98780505	98780381	ENSG00000187472.4	-	processed_pseudogene	KNOWN	RP11-67P15.1	1	1	-0.269345
chr6	98829967	98832508	98831237	ENSG00000283010.1	-	lincRNA	KNOWN	RP1-273N12.4	1	3	0.110551
chr6	98834592	98839490	98837041	ENSG00000184486.8	+	protein_coding	KNOWN	POU3F2	1	1	0.118144
chr6	98868538	98948006	98908272	ENSG00000112234.8	-	protein_coding	KNOWN	FBXL4	2	10	-0.254891
chr6	99082449	99082761	99082605	ENSG00000271042.1	+	processed_pseudogene	KNOWN	RP3-364H10.1	1	1	-0.417022
chr6	99124609	99124696	99124652	ENSG00000265226.1	+	miRNA	KNOWN	MIR548AI	1	1	-0.567353
chr6	99174744	99175479	99175111	ENSG00000232699.3	+	processed_pseudogene	KNOWN	BDH2P1	1	1	-0.828574
chr6	99271169	99350062	99310615	ENSG00000146267.11	-	protein_coding	KNOWN	FAXC	4	6	-0.231645
chr6	99369400	99394204	99381802	ENSG00000132423.10	-	protein_coding	KNOWN	COQ3	4	8	-0.388425
chr6	99398051	99425331	99411691	ENSG00000132424.14	-	protein_coding	KNOWN	PNISR	10	12	-0.225721
chr6	99424922	99431373	99428147	ENSG00000228506.1	+	antisense	KNOWN	RP11-98I9.4	1	2	-0.324293
chr6	99432379	99521728	99477053	ENSG00000123552.17	-	protein_coding	KNOWN	USP45	13	18	-0.350497
chr6	99520693	99531918	99526305	ENSG00000228439.4	+	antisense	KNOWN	TSTD3	1	4	-0.214851
chr6	99526097	99526205	99526151	ENSG00000274603.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.238157
chr6	99542380	99568973	99555676	ENSG00000112237.12	-	protein_coding	KNOWN	CCNC	19	13	-0.130829
chr6	99568097	99569096	99568596	ENSG00000272017.1	+	antisense	KNOWN	RP1-199J3.7	1	1	-0.142473
chr6	99575712	99576456	99576084	ENSG00000219755.1	+	processed_pseudogene	KNOWN	RP1-199J3.5	1	1	-0.281467
chr6	99587611	99589898	99588754	ENSG00000279170.1	+	TEC	KNOWN	RP1-199J3.6	1	1	-0.281467
chr6	99606730	99615578	99611154	ENSG00000112238.11	+	protein_coding	KNOWN	PRDM13	2	4	-0.079156
chr6	99642237	99642347	99642292	ENSG00000199303.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.686718
chr6	99919910	99994247	99957078	ENSG00000152034.10	-	protein_coding	KNOWN	MCHR2	2	6	-0.429932
chr6	99993944	100076413	100035178	ENSG00000229315.6	+	antisense	KNOWN	MCHR2-AS1	4	5	-0.416143
chr6	100050372	100051236	100050804	ENSG00000219257.2	-	processed_pseudogene	KNOWN	NPM1P38	1	1	-0.381078
chr6	100093311	100093768	100093539	ENSG00000275716.1	-	processed_pseudogene	KNOWN	RP3-344J20.3	1	1	-0.060011
chr6	100136064	100136663	100136363	ENSG00000213177.3	+	processed_pseudogene	KNOWN	PRDX2P4	1	1	-0.280920
chr6	100177209	100178192	100177700	ENSG00000216378.1	+	processed_pseudogene	KNOWN	RP3-344J20.1	1	1	-0.467042
chr6	100229545	100229649	100229597	ENSG00000275020.1	-	miRNA	NOVEL	AL080285.1	1	1	0.157209
chr6	100385015	100464929	100424972	ENSG00000112246.9	-	protein_coding	KNOWN	SIM1	4	12	-0.128450
chr6	100427118	100437484	100432301	ENSG00000228082.1	+	antisense	KNOWN	RP1-121G13.2	1	2	-0.092921
chr6	100508194	100881372	100694783	ENSG00000112249.13	-	protein_coding	KNOWN	ASCC3	7	42	-0.421932
chr6	100530276	100531052	100530664	ENSG00000220695.1	+	processed_pseudogene	KNOWN	RP1-121G13.3	1	1	-0.406127
chr6	100881471	100882987	100882229	ENSG00000260000.2	+	antisense	KNOWN	RP3-467N11.1	1	1	-0.256736
chr6	100889603	100890338	100889970	ENSG00000270987.1	+	processed_pseudogene	KNOWN	RP3-467N11.2	1	1	-0.172670
chr6	101398788	102070083	101734435	ENSG00000164418.19	+	protein_coding	KNOWN	GRIK2	11	17	-0.484476
chr6	101430411	101431553	101430982	ENSG00000218475.2	-	processed_pseudogene	KNOWN	ACTG1P18	1	1	-0.087332
chr6	102078872	102079555	102079213	ENSG00000218536.1	+	processed_pseudogene	KNOWN	AP002530.2	1	1	-0.406814
chr6	102453367	102453792	102453579	ENSG00000219757.1	-	processed_pseudogene	KNOWN	RP11-793L10.1	1	1	-0.385710
chr6	102828886	102828976	102828931	ENSG00000276165.1	+	miRNA	NOVEL	AL513011.1	1	1	-0.950821
chr6	103002514	103003897	103003205	ENSG00000217120.1	+	processed_pseudogene	KNOWN	RP1-76C18.1	1	1	-0.717486
chr6	103583135	103583268	103583201	ENSG00000202283.1	+	snoRNA	NOVEL	SNORA33	1	1	-0.619503
chr6	104017633	104019748	104018690	ENSG00000216817.1	-	processed_pseudogene	KNOWN	R3HDM2P2	1	1	-0.245704
chr6	104025540	104026763	104026151	ENSG00000214428.3	-	processed_pseudogene	KNOWN	NPM1P10	1	2	-0.245704
chr6	104687241	104687671	104687456	ENSG00000218173.1	+	processed_pseudogene	KNOWN	RP11-427E4.1	1	1	-0.523528
chr6	104728093	104859919	104794006	ENSG00000085382.11	-	protein_coding	KNOWN	HACE1	12	26	-0.531590
chr6	104766822	104766926	104766874	ENSG00000252944.1	+	snRNA	KNOWN	RNU6-897P	1	1	-0.416705
chr6	104831129	104845820	104838474	ENSG00000227535.2	-	sense_overlapping	KNOWN	RP11-809N15.2	1	3	-0.580967
chr6	104860449	104862123	104861286	ENSG00000271099.1	+	processed_pseudogene	KNOWN	RP11-809N15.3	1	1	-0.340119
chr6	104936294	104940527	104938410	ENSG00000203809.5	-	lincRNA	KNOWN	LINC00577	1	3	-0.147584
chr6	104957048	105083332	105020190	ENSG00000187772.6	+	protein_coding	KNOWN	LIN28B	1	4	-0.532981
chr6	105045562	105045668	105045615	ENSG00000212147.1	-	snRNA	KNOWN	RNU6-1106P	1	1	-0.488783
chr6	105096822	105137174	105116998	ENSG00000112276.13	-	protein_coding	KNOWN	BVES	3	8	-0.108799
chr6	105136308	105169945	105153126	ENSG00000203808.10	+	antisense	KNOWN	BVES-AS1	4	5	-0.483084
chr6	105158280	105179995	105169137	ENSG00000132429.9	-	protein_coding	KNOWN	POPDC3	4	4	-0.428383
chr6	105196853	105196936	105196894	ENSG00000252918.1	-	miRNA	NOVEL	AL359709.1	1	1	-0.239717
chr6	105273220	105273760	105273490	ENSG00000272102.1	-	lincRNA	KNOWN	RP3-355L5.5	1	1	0.033098
chr6	105277565	105403084	105340324	ENSG00000085377.13	-	protein_coding	KNOWN	PREP	2	15	-0.148031
chr6	105279016	105281755	105280385	ENSG00000231628.1	+	antisense	KNOWN	RP3-355L5.4	1	2	0.033098
chr6	105298149	105298895	105298522	ENSG00000216639.1	+	processed_pseudogene	KNOWN	RP3-355L5.3	1	1	-0.298960
chr6	105302453	105302823	105302638	ENSG00000219902.1	-	processed_pseudogene	KNOWN	RPL35P3	1	1	-0.298960
chr6	105612667	105632196	105622431	ENSG00000237567.1	-	lincRNA	KNOWN	RP3-359N14.2	1	6	0.154339
chr6	105666326	105667998	105667162	ENSG00000219088.1	+	processed_pseudogene	KNOWN	RP3-359N14.1	1	1	-0.401048
chr6	105904373	105904687	105904530	ENSG00000200198.1	+	misc_RNA	KNOWN	RN7SKP211	1	1	0.023605
chr6	106086320	106109939	106098129	ENSG00000057657.14	+	protein_coding	KNOWN	PRDM1	8	9	0.048474
chr6	106100140	106100593	106100366	ENSG00000269919.1	+	sense_intronic	KNOWN	RP1-134E15.3	1	1	0.052892
chr6	106184476	106325820	106255148	ENSG00000057663.12	-	protein_coding	KNOWN	ATG5	7	8	-0.194608
chr6	106271634	106271720	106271677	ENSG00000273744.1	+	snRNA	NOVEL	U4	1	1	0.051803
chr6	106283413	106283711	106283562	ENSG00000244710.3	-	misc_RNA	KNOWN	RN7SL47P	1	1	0.051803
chr6	106304176	106304286	106304231	ENSG00000252444.1	+	snRNA	KNOWN	RNU6-344P	1	1	-0.317884
chr6	106358566	106359717	106359141	ENSG00000233941.1	-	antisense	KNOWN	RP11-404H14.1	1	2	-0.195585
chr6	106360808	106571978	106466393	ENSG00000112297.14	+	protein_coding	KNOWN	AIM1	4	22	-0.157768
chr6	106420706	106420807	106420756	ENSG00000207499.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.297220
chr6	106449381	106449497	106449439	ENSG00000202386.1	+	rRNA	KNOWN	RNA5SP211	1	1	0.109694
chr6	106451496	106457248	106454372	ENSG00000282408.1	-	antisense	KNOWN	RP3-335E1.1	1	2	-0.405508
chr6	106454828	106454929	106454878	ENSG00000200314.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.405508
chr6	106571971	106629487	106600729	ENSG00000130347.12	-	protein_coding	KNOWN	RTN4IP1	4	9	-0.054306
chr6	106607716	106607819	106607767	ENSG00000200295.1	+	snRNA	KNOWN	RNU6-527P	1	1	0.042804
chr6	106629578	106668417	106648997	ENSG00000130348.11	+	protein_coding	KNOWN	QRSL1	3	11	-0.133511
chr6	106642463	106642928	106642695	ENSG00000216977.1	+	processed_pseudogene	KNOWN	RPL21P65	1	1	-0.224192
chr6	106695535	106699994	106697764	ENSG00000229654.1	+	lincRNA	KNOWN	RP1-60O19.2	1	3	-0.417306
chr6	106717452	106787541	106752496	ENSG00000235142.7	-	lincRNA	KNOWN	RP1-60O19.1	12	7	-0.303911
chr6	106738948	106739054	106739001	ENSG00000202285.1	-	snRNA	KNOWN	RNU6-117P	1	1	-0.318558
chr6	106784125	106784220	106784172	ENSG00000207577.1	+	miRNA	KNOWN	MIR587	1	1	-0.068049
chr6	106969831	106975627	106972729	ENSG00000272398.5	-	protein_coding	KNOWN	CD24	8	3	0.100147
chr6	107028213	107051342	107039777	ENSG00000130349.9	+	protein_coding	KNOWN	C6orf203	4	5	0.043561
chr6	107065182	107115269	107090225	ENSG00000178409.13	-	protein_coding	KNOWN	BEND3	2	5	0.036276
chr6	107133071	107133170	107133120	ENSG00000252125.1	+	snRNA	KNOWN	RNU6-1299P	1	1	0.108965
chr6	107152557	107459564	107306060	ENSG00000164494.11	-	protein_coding	KNOWN	PDSS2	3	8	-0.183296
chr6	107192300	107192573	107192436	ENSG00000276620.1	+	processed_pseudogene	KNOWN	RP11-300D11.3	1	1	-0.244190
chr6	107229759	107230152	107229955	ENSG00000220237.1	+	processed_pseudogene	KNOWN	RPS24P12	1	1	-0.181618
chr6	107489958	107660167	107575062	ENSG00000112320.11	+	protein_coding	KNOWN	SOBP	4	7	-0.337312
chr6	107509803	107511721	107510762	ENSG00000234206.5	-	antisense	KNOWN	RP1-67A8.3	2	3	-0.472946
chr6	107697299	107700218	107698758	ENSG00000280135.1	-	TEC	KNOWN	RP1-47M23.3	1	1	0.083724
chr6	107704104	107824317	107764210	ENSG00000146285.13	-	protein_coding	KNOWN	SCML4	11	8	-0.033723
chr6	107867756	107958189	107912972	ENSG00000025796.13	-	protein_coding	KNOWN	SEC63	10	21	-0.071370
chr6	107930088	107930182	107930135	ENSG00000238420.1	+	snRNA	KNOWN	RNU6-437P	1	1	-0.195038
chr6	107931800	107932254	107932027	ENSG00000232778.1	+	processed_pseudogene	KNOWN	RPL23AP50	1	1	-0.195038
chr6	107957413	107959986	107958699	ENSG00000272476.1	+	antisense	KNOWN	RP1-191J18.66	1	1	0.212673
chr6	107985089	107985690	107985389	ENSG00000224987.1	-	processed_pseudogene	KNOWN	RP1-191J18.65	1	2	-0.123021
chr6	107985659	107985773	107985716	ENSG00000253090.2	-	snoRNA	NOVEL	SNORA73	1	1	-0.123021
chr6	107985811	107986031	107985921	ENSG00000231112.1	-	processed_pseudogene	KNOWN	MTHFD2P3	1	1	-0.123021
chr6	108004357	108005568	108004962	ENSG00000225093.1	-	processed_pseudogene	KNOWN	RPL3P7	1	1	0.330779
chr6	108030249	108030718	108030483	ENSG00000271734.1	-	lincRNA	KNOWN	RP1-111B22.3	1	1	0.352144
chr6	108041409	108165854	108103631	ENSG00000081087.14	-	protein_coding	KNOWN	OSTM1	7	7	0.132942
chr6	108060818	108060930	108060874	ENSG00000238490.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.181027
chr6	108123515	108159392	108141453	ENSG00000225174.1	+	lincRNA	KNOWN	OSTM1-AS1	2	2	0.151418
chr6	108166058	108188809	108177433	ENSG00000112333.11	+	protein_coding	KNOWN	NR2E1	4	9	0.133666
chr6	108178871	108179317	108179094	ENSG00000279398.1	+	TEC	KNOWN	RP3-429G5.5	1	1	0.160523
chr6	108211222	108261260	108236241	ENSG00000112335.14	-	protein_coding	KNOWN	SNX3	4	5	0.076083
chr6	108252214	108252400	108252307	ENSG00000233511.1	+	processed_pseudogene	KNOWN	RP1-128O3.5	1	1	0.123356
chr6	108252401	108252507	108252454	ENSG00000212525.1	+	rRNA	KNOWN	RNA5SP212	1	1	0.123356
chr6	108275642	108276546	108276094	ENSG00000230248.1	+	lincRNA	KNOWN	RP1-128O3.4	1	2	0.296191
chr6	108292766	108292869	108292817	ENSG00000206974.1	+	snRNA	KNOWN	RNU6-1144P	1	1	-0.033539
chr6	108294894	108526796	108410845	ENSG00000135537.16	+	protein_coding	KNOWN	LACE1	7	13	-0.099505
chr6	108318079	108318404	108318241	ENSG00000238055.1	+	processed_pseudogene	KNOWN	RP1-128O3.6	1	1	0.029061
chr6	108359084	108359863	108359473	ENSG00000279498.1	-	TEC	KNOWN	RP11-72I2.2	1	1	-0.058034
chr6	108372772	108372927	108372849	ENSG00000238079.1	-	processed_pseudogene	KNOWN	RP11-72I2.1	1	1	-0.145700
chr6	108387512	108388080	108387796	ENSG00000227072.1	+	processed_pseudogene	KNOWN	RP3-466I7.1	1	2	-0.145700
chr6	108392073	108392177	108392125	ENSG00000200799.1	+	snRNA	KNOWN	RNU6-770P	1	1	-0.006310
chr6	108551018	108551207	108551112	ENSG00000271608.1	-	processed_pseudogene	KNOWN	RP11-697G4.4	1	1	0.483501
chr6	108559835	108684774	108622304	ENSG00000118689.14	+	protein_coding	KNOWN	FOXO3	3	4	0.170990
chr6	108618000	108618285	108618142	ENSG00000228976.1	-	processed_pseudogene	KNOWN	SUMO2P8	1	1	-0.211915
chr6	108751654	108769942	108760798	ENSG00000203801.8	+	lincRNA	KNOWN	LINC00222	7	5	0.312118
chr6	108782126	108787053	108784589	ENSG00000219565.2	-	transcribed_processed_pseudogene	KNOWN	ZNF259P1	2	1	0.040330
chr6	108817680	108817926	108817803	ENSG00000231559.1	+	processed_pseudogene	KNOWN	RP3-354J5.3	1	1	0.256111
chr6	108848416	108974472	108911444	ENSG00000118690.12	+	protein_coding	KNOWN	ARMC2	5	18	0.107089
chr6	108856400	108856737	108856568	ENSG00000218872.1	-	processed_pseudogene	KNOWN	RP11-249L21.2	1	1	0.044426
chr6	108907615	108907873	108907744	ENSG00000228834.1	-	processed_pseudogene	KNOWN	RP11-249L21.4	1	1	0.213780
chr6	108922976	108924103	108923539	ENSG00000230290.1	-	antisense	KNOWN	ARMC2-AS1	1	2	-0.027969
chr6	108986437	109094819	109040628	ENSG00000080546.13	-	protein_coding	KNOWN	SESN1	7	10	-0.214504
chr6	108998482	108999125	108998803	ENSG00000271730.1	+	antisense	KNOWN	RP11-787I22.3	1	1	-0.323046
chr6	109059509	109059614	109059561	ENSG00000199944.1	-	snRNA	KNOWN	RNU6-653P	1	1	-0.163567
chr6	109095110	109163932	109129521	ENSG00000183137.14	+	protein_coding	KNOWN	CEP57L1	24	12	-0.021889
chr6	109165833	109271014	109218423	ENSG00000243587.6	+	polymorphic_pseudogene	KNOWN	C6orf183	2	15	-0.008991
chr6	109285485	109355063	109320274	ENSG00000203799.10	+	unitary_pseudogene	KNOWN	CCDC162P	11	20	0.148605
chr6	109288440	109288562	109288501	ENSG00000233908.1	+	processed_pseudogene	KNOWN	RP11-425D10.1	1	1	-0.065248
chr6	109288571	109290503	109289537	ENSG00000219700.1	-	processed_pseudogene	KNOWN	PTCHD3P3	1	2	-0.058375
chr6	109305494	109305595	109305544	ENSG00000201023.1	+	misc_RNA	KNOWN	RNY3P11	1	1	-0.038902
chr6	109327175	109327914	109327544	ENSG00000218632.3	-	processed_pseudogene	KNOWN	RPL7P28	1	1	0.119473
chr6	109366514	109382559	109374536	ENSG00000135535.14	-	protein_coding	KNOWN	CD164	11	7	-0.027948
chr6	109382795	109383666	109383230	ENSG00000260273.1	+	antisense	KNOWN	RP11-425D10.10	1	1	-0.059126
chr6	109390215	109441171	109415693	ENSG00000185250.15	-	protein_coding	KNOWN	PPIL6	8	9	0.036515
chr6	109434174	109434240	109434207	ENSG00000239160.1	-	miRNA	NOVEL	AL109947.1	1	1	0.198907
chr6	109440763	109443919	109442341	ENSG00000135587.8	+	protein_coding	KNOWN	SMPD2	3	10	0.198907
chr6	109444062	109465968	109455015	ENSG00000135596.17	-	protein_coding	KNOWN	MICAL1	8	25	0.731574
chr6	109462594	109483237	109472915	ENSG00000112365.4	-	protein_coding	KNOWN	ZBTB24	1	7	0.600100
chr6	109487906	109506800	109497353	ENSG00000223537.2	+	antisense	KNOWN	RP5-919F19.5	1	3	0.059423
chr6	109492856	109691217	109592036	ENSG00000155085.15	-	protein_coding	KNOWN	AK9	12	41	-0.308807
chr6	109504387	109504526	109504456	ENSG00000253037.1	+	miRNA	NOVEL	AL109947.2	1	1	0.015030
chr6	109691312	109825428	109758370	ENSG00000112367.10	+	protein_coding	KNOWN	FIG4	5	23	-0.206538
chr6	109826522	109828785	109827653	ENSG00000232311.1	+	lincRNA	KNOWN	RP1-249I4.2	1	2	-0.149766
chr6	109978256	109980718	109979487	ENSG00000146360.8	+	protein_coding	KNOWN	GPR6	2	3	-0.353696
chr6	110099819	110180004	110139911	ENSG00000112290.12	-	protein_coding	KNOWN	WASF1	10	11	-0.230717
chr6	110180141	110254275	110217208	ENSG00000168438.14	+	protein_coding	KNOWN	CDC40	7	16	-0.255298
chr6	110245928	110358272	110302100	ENSG00000053328.8	-	protein_coding	KNOWN	METTL24	2	5	-0.163256
chr6	110391771	110415562	110403666	ENSG00000203797.9	-	protein_coding	KNOWN	DDO	3	5	-0.036929
chr6	110424687	110476641	110450664	ENSG00000004809.13	-	protein_coding	KNOWN	SLC22A16	8	10	-0.122919
chr6	110439996	110440303	110440149	ENSG00000241162.3	-	misc_RNA	KNOWN	RN7SL617P	1	1	-0.095868
chr6	110440082	110440165	110440123	ENSG00000281088.1	-	miRNA	NOVEL	AC002464.1	1	1	-0.095868
chr6	110477907	110479436	110478671	ENSG00000260188.1	+	antisense	KNOWN	CTA-331P3.1	1	1	-0.039714
chr6	110562175	110562615	110562395	ENSG00000219559.1	-	processed_pseudogene	KNOWN	RP11-346C16.4	1	1	-0.044787
chr6	110598093	110598705	110598399	ENSG00000270934.1	+	processed_pseudogene	KNOWN	RP11-346C16.6	1	1	0.148854
chr6	110609978	110815958	110712968	ENSG00000155111.14	-	protein_coding	KNOWN	CDK19	8	14	-0.086484
chr6	110645699	110646558	110646128	ENSG00000213150.2	+	processed_pseudogene	KNOWN	RP11-346C16.2	1	1	-0.001667
chr6	110700562	110700900	110700731	ENSG00000217041.1	+	processed_pseudogene	KNOWN	RP11-346C16.1	1	1	0.255817
chr6	110706362	110706882	110706622	ENSG00000219150.2	-	processed_pseudogene	KNOWN	RP11-569A2.2	1	2	0.255817
chr6	110722250	110722348	110722299	ENSG00000200522.1	-	snRNA	KNOWN	RNU6-957P	1	1	0.083222
chr6	110814621	110895713	110855167	ENSG00000123505.14	+	protein_coding	KNOWN	AMD1	9	9	0.106147
chr6	110848546	110848673	110848609	ENSG00000212587.1	+	snoRNA	NOVEL	SNORA40	1	1	-0.059074
chr6	110856417	110856522	110856469	ENSG00000199360.1	+	snRNA	KNOWN	RNU6-1115P	1	1	0.205374
chr6	110858239	110859147	110858693	ENSG00000213149.3	+	processed_pseudogene	KNOWN	CNN2P9	1	1	0.205374
chr6	110863860	110864451	110864155	ENSG00000271607.1	+	processed_pseudogene	KNOWN	RP3-418A9.3	1	2	0.205374
chr6	110923566	110924107	110923836	ENSG00000219329.1	+	processed_pseudogene	KNOWN	RP11-397G5.2	1	1	0.091992
chr6	110958560	110967890	110963225	ENSG00000155115.6	+	protein_coding	KNOWN	GTF3C6	2	6	0.270795
chr6	110969773	110969872	110969822	ENSG00000266032.1	-	miRNA	NOVEL	AL357515.1	1	1	0.270795
chr6	110982015	111028263	111005139	ENSG00000197498.12	+	protein_coding	KNOWN	RPF2	4	10	0.092269
chr6	111008270	111008376	111008323	ENSG00000207431.1	-	snRNA	KNOWN	RNU6-906P	1	1	-0.007544
chr6	111046868	111047521	111047194	ENSG00000218803.1	-	processed_pseudogene	KNOWN	GSTM2P1	1	1	0.166846
chr6	111087503	111231194	111159348	ENSG00000112394.16	+	protein_coding	KNOWN	SLC16A10	6	6	-0.133199
chr6	111091213	111091332	111091272	ENSG00000200926.1	-	snRNA	KNOWN	RNU6-960P	1	1	0.012920
chr6	111227747	111259034	111243390	ENSG00000231046.1	-	antisense	KNOWN	RP11-428F8.2	1	4	-0.131713
chr6	111259348	111271167	111265257	ENSG00000173214.5	+	protein_coding	KNOWN	KIAA1919	1	4	0.037136
chr6	111277932	111278742	111278337	ENSG00000230177.1	+	antisense	KNOWN	RP5-1112D6.4	1	2	-0.100653
chr6	111297126	111298510	111297818	ENSG00000271789.1	+	lincRNA	KNOWN	RP5-1112D6.7	1	1	0.150885
chr6	111299028	111483715	111391371	ENSG00000009413.15	-	protein_coding	KNOWN	REV3L	14	34	-0.083329
chr6	111309203	111313517	111311360	ENSG00000272356.1	+	antisense	KNOWN	RP5-1112D6.8	1	1	-0.002795
chr6	111353702	111354183	111353942	ENSG00000220392.1	+	processed_pseudogene	KNOWN	FCF1P5	1	1	-0.076763
chr6	111360641	111361607	111361124	ENSG00000229276.1	-	sense_intronic	KNOWN	REV3L-IT1	1	2	-0.076763
chr6	111430260	111431781	111431020	ENSG00000218676.1	+	processed_pseudogene	KNOWN	BRD7P4	1	1	-0.079054
chr6	111483511	111598302	111540906	ENSG00000231889.7	+	antisense	KNOWN	TRAF3IP2-AS1	12	4	0.177365
chr6	111494991	111495713	111495352	ENSG00000220506.2	-	processed_pseudogene	KNOWN	RP3-415N12.1	1	2	0.216798
chr6	111556454	111606278	111581366	ENSG00000056972.18	-	protein_coding	KNOWN	TRAF3IP2	12	10	0.327592
chr6	111599875	111602295	111601085	ENSG00000255389.1	+	antisense	KNOWN	C6orf3	1	1	0.303173
chr6	111660332	111873452	111766892	ENSG00000010810.17	-	protein_coding	KNOWN	FYN	29	14	0.104522
chr6	111900489	111901851	111901170	ENSG00000227012.2	-	lincRNA	KNOWN	RP1-97J1.2	1	2	0.083580
chr6	111909680	111909767	111909723	ENSG00000211983.2	+	miRNA	NOVEL	AL158035.1	1	1	0.083580
chr6	112054072	112070969	112062520	ENSG00000112761.18	+	protein_coding	KNOWN	WISP3	11	7	0.394207
chr6	112070777	112087529	112079153	ENSG00000074935.13	-	protein_coding	KNOWN	TUBE1	11	12	-0.299199
chr6	112087599	112102790	112095194	ENSG00000203778.7	+	protein_coding	KNOWN	FAM229B	2	4	-0.064966
chr6	112108760	112254939	112181849	ENSG00000112769.18	-	protein_coding	KNOWN	LAMA4	22	39	-0.092255
chr6	112154765	112166476	112160620	ENSG00000237234.6	+	antisense	KNOWN	RP1-142L7.5	7	7	-0.354691
chr6	112196440	112196546	112196493	ENSG00000207044.1	-	snRNA	KNOWN	RNU6-1226P	1	1	0.284637
chr6	112217640	112219570	112218605	ENSG00000270661.1	-	lincRNA	KNOWN	RP1-142L7.9	1	1	-0.103024
chr6	112234165	112234758	112234461	ENSG00000271208.1	-	lincRNA	KNOWN	RP1-142L7.8	1	1	0.033777
chr6	112236093	112307009	112271551	ENSG00000226440.7	+	antisense	KNOWN	RP11-506B6.6	9	4	0.029194
chr6	112236806	112350094	112293450	ENSG00000281613.2	+	protein_coding	KNOWN	RP11-506B6.7	4	5	0.011891
chr6	112325753	112326749	112326251	ENSG00000216663.3	-	processed_pseudogene	KNOWN	RP11-506B6.5	1	1	0.055466
chr6	112347330	112351296	112349313	ENSG00000251258.1	+	protein_coding	KNOWN	RFPL4B	1	3	-0.050256
chr6	112355841	112356714	112356277	ENSG00000219773.1	-	processed_pseudogene	KNOWN	RPSAP45	1	1	0.027503
chr6	112361437	112362722	112362079	ENSG00000215807.4	-	processed_pseudogene	KNOWN	KRT18P65	1	1	0.027503
chr6	112361848	112361939	112361893	ENSG00000266485.1	-	miRNA	NOVEL	AL365214.1	1	1	0.027503
chr6	112365704	112367444	112366574	ENSG00000217770.1	-	processed_pseudogene	KNOWN	FEM1AP3	1	1	0.027503
chr6	112476538	112481636	112479087	ENSG00000232299.1	-	lincRNA	KNOWN	RP1-105O18.1	1	2	0.012375
chr6	112532182	112532285	112532233	ENSG00000252215.1	+	miRNA	NOVEL	AL357514.1	1	1	-0.039652
chr6	112616703	112617880	112617291	ENSG00000225580.2	-	processed_pseudogene	KNOWN	RP1-159M24.1	1	1	0.075313
chr6	112825939	112826470	112826204	ENSG00000271498.1	+	processed_pseudogene	KNOWN	RP11-505K1.1	1	1	-0.284729
chr6	112971493	112971599	112971546	ENSG00000201386.1	+	snRNA	KNOWN	RNU6-1163P	1	1	-0.292672
chr6	113010937	113011415	113011176	ENSG00000218490.1	+	processed_pseudogene	KNOWN	FCF1P10	1	1	-0.452329
chr6	113222166	113224072	113223119	ENSG00000216904.2	+	processed_pseudogene	KNOWN	SOCS5P5	1	2	-0.157528
chr6	113357003	113367944	113362473	ENSG00000223811.1	-	lincRNA	KNOWN	RP11-437J19.1	1	3	0.152655
chr6	113428540	113433421	113430980	ENSG00000232316.1	-	lincRNA	KNOWN	RP1-124C6.1	2	2	0.040351
chr6	113428797	113428886	113428841	ENSG00000280723.1	+	miRNA	NOVEL	AL021326.1	1	1	-0.277242
chr6	113514987	113515083	113515035	ENSG00000222677.1	+	miRNA	NOVEL	AL513123.1	1	1	0.285872
chr6	113531118	113543793	113537455	ENSG00000236347.1	+	lincRNA	KNOWN	RP11-346D19.1	1	3	0.091992
chr6	113581501	113581947	113581724	ENSG00000218208.1	+	processed_pseudogene	KNOWN	RP11-367G18.2	1	1	-0.112022
chr6	113623535	113650074	113636804	ENSG00000230943.1	-	lincRNA	KNOWN	RP11-367G18.1	2	3	-0.026375
chr6	113704833	113704923	113704878	ENSG00000221559.2	+	miRNA	NOVEL	AL357519.1	1	1	-0.090069
chr6	113791829	113837368	113814598	ENSG00000231912.2	-	lincRNA	KNOWN	RP1-249H1.2	1	2	-0.124057
chr6	113839279	113839621	113839450	ENSG00000219758.6	+	processed_pseudogene	KNOWN	RP1-249H1.3	1	1	-0.047171
chr6	113857362	113863471	113860416	ENSG00000277443.1	+	protein_coding	KNOWN	MARCKS	2	5	0.143131
chr6	113868013	113873351	113870682	ENSG00000227502.2	-	lincRNA	KNOWN	LINC01268	1	3	-0.014533
chr6	113904138	113921642	113912890	ENSG00000175967.3	+	antisense	KNOWN	RP11-544L8__B.4	1	4	0.030236
chr6	113933028	114011308	113972168	ENSG00000196591.11	-	protein_coding	KNOWN	HDAC2	17	15	-0.180126
chr6	113969701	114471705	114220703	ENSG00000228624.7	+	antisense	KNOWN	RP3-399L15.3	18	10	-0.466521
chr6	114019621	114020483	114020052	ENSG00000216723.1	-	processed_pseudogene	KNOWN	NUDT19P3	1	2	-0.163265
chr6	114055586	114343045	114199315	ENSG00000249853.7	-	protein_coding	KNOWN	HS3ST5	3	5	-0.537427
chr6	114084168	114084792	114084480	ENSG00000216471.3	-	processed_pseudogene	KNOWN	RPSAP43	1	1	-0.410509
chr6	114220681	114220786	114220733	ENSG00000212333.1	-	rRNA	KNOWN	RNA5SP213	1	1	-0.587608
chr6	114277385	114277478	114277431	ENSG00000221599.1	-	miRNA	NOVEL	AL136446.1	1	1	-0.337873
chr6	114349483	114350648	114350065	ENSG00000218089.1	-	processed_pseudogene	KNOWN	DNAJA1P4	1	1	-0.465737
chr6	114477350	114488752	114483051	ENSG00000232395.1	-	lincRNA	KNOWN	RP3-399L15.1	2	2	-0.580967
chr6	114523451	114535875	114529663	ENSG00000226079.1	-	lincRNA	KNOWN	RP3-399L15.2	1	2	-0.633864
chr6	114778509	114778595	114778552	ENSG00000273817.1	-	miRNA	NOVEL	AL590964.1	1	1	-0.845077
chr6	114866873	114866976	114866924	ENSG00000251882.1	-	snRNA	KNOWN	RNU6-475P	1	1	-0.579060
chr6	115358498	115358752	115358625	ENSG00000219619.2	-	processed_pseudogene	KNOWN	RP11-126M14.1	1	1	-0.572824
chr6	115633542	115634191	115633866	ENSG00000228777.1	-	lincRNA	KNOWN	RP11-282C5.1	1	2	-0.824350
chr6	115931149	116060758	115995953	ENSG00000111816.7	-	protein_coding	KNOWN	FRK	1	8	-0.431752
chr6	116038756	116039495	116039125	ENSG00000186743.2	+	processed_pseudogene	KNOWN	TPI1P3	1	1	-0.393435
chr6	116100849	116249497	116175173	ENSG00000178425.13	+	protein_coding	KNOWN	NT5DC1	4	12	-0.286121
chr6	116118923	116158747	116138835	ENSG00000123500.9	-	protein_coding	KNOWN	COL10A1	4	3	-0.198303
chr6	116137058	116137572	116137315	ENSG00000218428.1	-	processed_pseudogene	KNOWN	NIP7P3	1	1	-0.214897
chr6	116244187	116244728	116244457	ENSG00000236326.1	-	antisense	KNOWN	RP3-486I3.5	1	2	-0.292438
chr6	116249961	116254140	116252050	ENSG00000187189.10	-	protein_coding	KNOWN	TSPYL4	1	1	-0.247445
chr6	116254173	116444860	116349516	ENSG00000111817.16	+	protein_coding	KNOWN	DSE	7	7	-0.021913
chr6	116254207	116256743	116255475	ENSG00000237021.2	+	lincRNA	KNOWN	RP3-486I3.7	1	2	-0.247032
chr6	116258493	116259115	116258804	ENSG00000233558.1	-	processed_pseudogene	KNOWN	RP3-486I3.4	1	1	-0.247032
chr6	116276578	116279903	116278240	ENSG00000189241.6	-	protein_coding	KNOWN	TSPYL1	1	1	-0.060011
chr6	116280199	116370273	116325236	ENSG00000240050.5	+	lincRNA	KNOWN	RP1-93H18.1	2	5	-0.029376
chr6	116453014	116453565	116453289	ENSG00000217241.1	-	processed_pseudogene	KNOWN	CBX3P9	1	1	0.141745
chr6	116457323	116458669	116457996	ENSG00000218153.2	-	processed_pseudogene	KNOWN	KRT18P22	1	1	0.141745
chr6	116457732	116457822	116457777	ENSG00000265516.1	-	miRNA	NOVEL	Z84488.1	1	1	0.141745
chr6	116460739	116463692	116462215	ENSG00000244158.1	-	antisense	KNOWN	RP1-93H18.6	1	2	0.141745
chr6	116461370	116463779	116462574	ENSG00000188820.12	+	protein_coding	KNOWN	FAM26F	3	3	0.141745
chr6	116492297	116497099	116494698	ENSG00000234117.2	+	antisense	KNOWN	RP11-259P20.1	1	3	-0.127575
chr6	116494989	116545610	116520299	ENSG00000173626.9	-	protein_coding	KNOWN	TRAPPC3L	3	5	-0.064084
chr6	116511646	116524792	116518219	ENSG00000178033.5	+	protein_coding	KNOWN	FAM26E	1	2	-0.087558
chr6	116529013	116558868	116543940	ENSG00000164451.13	+	protein_coding	KNOWN	FAM26D	5	4	-0.011775
chr6	116571367	116597675	116584521	ENSG00000111832.12	+	protein_coding	KNOWN	RWDD1	6	8	-0.249893
chr6	116616479	116632985	116624732	ENSG00000111834.12	+	protein_coding	KNOWN	RSPH4A	3	6	-0.087752
chr6	116635618	116668794	116652206	ENSG00000153975.9	-	protein_coding	KNOWN	ZUFSP	4	10	-0.277375
chr6	116681187	116741866	116711526	ENSG00000196911.9	+	protein_coding	KNOWN	KPNA5	4	15	-0.228544
chr6	116752197	116765723	116758960	ENSG00000183807.7	-	protein_coding	KNOWN	FAM162B	1	4	-0.566089
chr6	116792085	116829037	116810561	ENSG00000173612.9	-	protein_coding	KNOWN	GPRC6A	3	6	-0.650070
chr6	116877212	116932163	116904687	ENSG00000185002.9	+	protein_coding	KNOWN	RFX6	3	19	-0.672018
chr6	117048670	117048838	117048754	ENSG00000217089.1	-	processed_pseudogene	KNOWN	RPS29P13	1	1	-0.401997
chr6	117060682	117060799	117060740	ENSG00000200248.1	+	rRNA	KNOWN	RNA5SP214	1	1	-0.497146
chr6	117265558	117273565	117269561	ENSG00000170162.13	+	protein_coding	KNOWN	VGLL2	2	4	-0.545677
chr6	117288300	117425855	117357077	ENSG00000047936.10	-	protein_coding	KNOWN	ROS1	3	44	-0.444071
chr6	117299364	117299638	117299501	ENSG00000251814.1	+	misc_RNA	KNOWN	RN7SKP18	1	1	-0.556747
chr6	117301455	117301758	117301606	ENSG00000222713.1	+	misc_RNA	KNOWN	RN7SKP51	1	1	-0.556747
chr6	117318211	117573571	117445891	ENSG00000282218.1	-	protein_coding	KNOWN	RP1-179P9.3	1	7	-0.242709
chr6	117431591	117432442	117432016	ENSG00000219703.1	+	processed_pseudogene	KNOWN	RAP1BP3	1	2	-0.501688
chr6	117445390	117445441	117445415	ENSG00000281606.1	+	miRNA	NOVEL	AL132671.1	1	1	-0.501688
chr6	117451130	117453525	117452327	ENSG00000226181.1	-	antisense	KNOWN	RP1-92C8.3	1	2	-0.194889
chr6	117453817	117569858	117511837	ENSG00000164465.18	+	protein_coding	KNOWN	DCBLD1	12	15	-0.035018
chr6	117457734	117457838	117457786	ENSG00000207461.1	-	snRNA	KNOWN	RNU6-253P	1	1	-0.194889
chr6	117560269	117602542	117581405	ENSG00000047932.13	-	protein_coding	KNOWN	GOPC	3	9	-0.382670
chr6	117633706	117645087	117639396	ENSG00000218233.1	+	unitary_pseudogene	KNOWN	NEPNP	1	2	-0.345588
chr6	117675502	117710640	117693071	ENSG00000153989.7	+	protein_coding	KNOWN	NUS1	1	5	-0.241825
chr6	117907526	118317676	118112601	ENSG00000196376.10	+	protein_coding	KNOWN	SLC35F1	2	8	-0.450576
chr6	117998975	117999448	117999211	ENSG00000230202.1	+	processed_pseudogene	KNOWN	RP11-632C17__A.1	1	1	-0.373672
chr6	118452469	118454992	118453730	ENSG00000216809.1	-	processed_pseudogene	KNOWN	RP11-57K17.1	1	1	-0.142964
chr6	118460772	118710075	118585423	ENSG00000111860.13	-	protein_coding	KNOWN	CEP85L	11	14	-0.238759
chr6	118501430	118502906	118502168	ENSG00000169075.7	+	processed_pseudogene	KNOWN	RP3-509L4.3	1	1	-0.497632
chr6	118548298	118560730	118554514	ENSG00000198523.5	+	protein_coding	KNOWN	PLN	1	2	-0.417121
chr6	118589070	118589634	118589352	ENSG00000217330.1	+	processed_pseudogene	KNOWN	SSXP10	1	1	-0.128917
chr6	118757518	118783420	118770469	ENSG00000225549.3	+	transcribed_processed_pseudogene	KNOWN	RP11-210H10__A.1	2	3	-0.172055
chr6	118813442	118935162	118874302	ENSG00000111877.17	-	protein_coding	KNOWN	MCM9	9	13	-0.255826
chr6	118894220	118909167	118901693	ENSG00000111875.7	+	protein_coding	KNOWN	ASF1A	2	4	-0.259772
chr6	118934785	119031541	118983163	ENSG00000253194.1	+	antisense	KNOWN	RP11-351A11.1	1	3	-0.354796
chr6	118959763	119149387	119054575	ENSG00000111879.18	-	protein_coding	KNOWN	FAM184A	14	19	-0.351867
chr6	119057880	119057974	119057927	ENSG00000222649.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.455496
chr6	119069047	119069143	119069095	ENSG00000207982.1	-	miRNA	KNOWN	MIR548B	1	1	-0.455496
chr6	119159297	119159476	119159386	ENSG00000220139.1	+	processed_pseudogene	KNOWN	RP3-354N19.1	1	1	-0.100653
chr6	119177209	119349761	119263485	ENSG00000111885.6	-	protein_coding	KNOWN	MAN1A1	1	13	-0.540466
chr6	119269133	119269714	119269423	ENSG00000216316.1	-	processed_pseudogene	KNOWN	RP3-354N19.3	1	1	-0.538485
chr6	119327281	119327385	119327333	ENSG00000200732.1	+	snRNA	KNOWN	RNU6-194P	1	1	-0.447034
chr6	120015179	120015257	120015218	ENSG00000265725.1	+	miRNA	KNOWN	MIR3144	1	1	-0.679067
chr6	120411495	120411606	120411550	ENSG00000276617.1	+	miRNA	NOVEL	AL590731.1	1	1	-0.774152
chr6	120526294	120526400	120526347	ENSG00000206857.1	-	snRNA	KNOWN	RNU6-214P	1	1	-0.654889
chr6	120686621	120686742	120686681	ENSG00000200310.1	+	rRNA	KNOWN	RNA5SP215	1	1	-0.608448
chr6	120781220	120781512	120781366	ENSG00000216710.1	+	processed_pseudogene	KNOWN	COX6A1P3	1	1	-0.798384
chr6	121079494	121334745	121207119	ENSG00000146350.13	-	protein_coding	KNOWN	TBC1D32	9	36	-0.423979
chr6	121354354	121354460	121354407	ENSG00000206598.1	+	snRNA	KNOWN	RNU6-1286P	1	1	-0.539364
chr6	121378797	121378898	121378847	ENSG00000207403.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.135186
chr6	121381472	121381860	121381666	ENSG00000220447.1	+	processed_pseudogene	KNOWN	RP1-276J11.2	1	1	-0.135186
chr6	121389324	121390357	121389840	ENSG00000272714.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP1-276J11.3	1	2	-0.120122
chr6	121435692	121449727	121442709	ENSG00000152661.7	+	protein_coding	KNOWN	GJA1	1	2	-0.061921
chr6	121453981	121454121	121454051	ENSG00000199458.1	-	snRNA	KNOWN	RNU4-35P	1	1	-0.221899
chr6	121478273	121479908	121479090	ENSG00000219784.2	-	processed_pseudogene	KNOWN	RP1-172I22.1	1	4	-0.169395
chr6	121542486	121542626	121542556	ENSG00000201379.1	-	snRNA	KNOWN	RNU4-76P	1	1	-0.330699
chr6	121580332	121580521	121580426	ENSG00000222659.1	-	snRNA	KNOWN	RNU2-8P	1	1	-0.111292
chr6	121641009	121641221	121641115	ENSG00000220326.2	-	processed_pseudogene	KNOWN	RP11-129H15.1	1	1	-0.055112
chr6	121653795	121654690	121654242	ENSG00000218180.2	+	processed_pseudogene	KNOWN	SLC25A5P7	1	1	-0.157986
chr6	121679972	121680459	121680215	ENSG00000219135.1	-	processed_pseudogene	KNOWN	RPL23AP48	1	1	-0.165806
chr6	121682925	121684272	121683598	ENSG00000217139.2	+	processed_pseudogene	KNOWN	RP11-129H15.4	1	1	-0.165806
chr6	121858179	121858768	121858473	ENSG00000220184.2	-	processed_pseudogene	KNOWN	HMGB3P18	1	1	-0.339724
chr6	122211648	122211811	122211729	ENSG00000199932.1	+	snRNA	KNOWN	RNU1-18P	1	1	-0.422581
chr6	122399546	122433119	122416332	ENSG00000025156.12	+	protein_coding	KNOWN	HSF2	3	13	-0.358789
chr6	122436789	122439223	122438006	ENSG00000279453.1	-	TEC	KNOWN	RP3-425C14.4	1	1	-0.198523
chr6	122443354	122471822	122457588	ENSG00000111897.6	-	protein_coding	KNOWN	SERINC1	1	10	-0.313966
chr6	122454358	122454612	122454485	ENSG00000275339.1	+	processed_pseudogene	KNOWN	RP3-425C14.6	1	1	-0.325928
chr6	122471917	122726373	122599145	ENSG00000135549.14	+	protein_coding	KNOWN	PKIB	12	8	-0.477081
chr6	122471923	122484161	122478042	ENSG00000279114.1	+	TEC	KNOWN	RP3-425C14.5	1	2	-0.603529
chr6	122531123	122531436	122531279	ENSG00000277408.1	-	processed_pseudogene	KNOWN	RP3-425C14.7	1	1	-0.454290
chr6	122643388	122644771	122644079	ENSG00000272472.1	+	sense_intronic	KNOWN	RP11-95G17.2	1	1	-0.587675
chr6	122745280	122745529	122745404	ENSG00000240606.3	+	misc_RNA	KNOWN	RN7SL564P	1	1	-0.650512
chr6	122779475	122784074	122781774	ENSG00000164434.11	+	protein_coding	KNOWN	FABP7	2	4	-0.489118
chr6	122789049	122809720	122799384	ENSG00000172594.12	+	protein_coding	KNOWN	SMPDL3A	3	8	-0.143949
chr6	122859678	122859988	122859833	ENSG00000232362.1	-	processed_pseudogene	KNOWN	ATP5LP2	1	1	-0.401823
chr6	122995971	123072927	123034449	ENSG00000146352.12	+	protein_coding	KNOWN	CLVS2	2	6	-0.598932
chr6	123058834	123058920	123058877	ENSG00000276942.1	-	miRNA	NOVEL	AL591428.1	1	1	-0.179921
chr6	123216339	123637093	123426716	ENSG00000186439.12	-	protein_coding	KNOWN	TRDN	6	41	-0.686405
chr6	123389421	123510241	123449831	ENSG00000235535.7	+	antisense	KNOWN	RP11-532N4.2	14	9	-0.756389
chr6	123740434	123740532	123740483	ENSG00000216015.1	-	miRNA	NOVEL	AL354936.1	1	1	-0.756005
chr6	123804141	124825657	124314899	ENSG00000188580.13	+	protein_coding	KNOWN	NKAIN2	5	8	-0.656868
chr6	123823240	123829285	123826262	ENSG00000237321.1	+	sense_intronic	KNOWN	RP11-374A22.1	1	2	-0.308188
chr6	124909093	124963039	124936066	ENSG00000236548.1	-	antisense	KNOWN	RNF217-AS1	1	7	-0.590707
chr6	124962545	125092633	125027589	ENSG00000146373.16	+	protein_coding	KNOWN	RNF217	11	9	-0.212478
chr6	125119049	125264407	125191728	ENSG00000111907.20	+	protein_coding	KNOWN	TPD52L1	17	8	-0.165238
chr6	125219962	125302078	125261020	ENSG00000111906.17	-	protein_coding	KNOWN	HDDC2	10	6	-0.016049
chr6	125370211	125374324	125372267	ENSG00000226409.1	-	antisense	KNOWN	RP11-735G4.1	1	3	-0.342636
chr6	125425627	125445183	125435405	ENSG00000228704.1	-	lincRNA	KNOWN	RP11-138M12.1	1	3	-0.498025
chr6	125578558	125749190	125663874	ENSG00000237742.6	-	antisense	KNOWN	RP11-624M8.1	5	5	-0.395789
chr6	125674353	125720218	125697285	ENSG00000224506.2	+	lincRNA	KNOWN	RP1-293L8.2	1	4	-0.358780
chr6	125747664	125761269	125754466	ENSG00000135547.8	+	protein_coding	KNOWN	HEY2	2	5	-0.391407
chr6	125781161	125932030	125856595	ENSG00000111912.19	+	protein_coding	KNOWN	NCOA7	11	17	-0.109769
chr6	125797856	125818858	125808357	ENSG00000232131.1	-	antisense	KNOWN	NCOA7-AS1	1	3	-0.099819
chr6	125875168	125875498	125875333	ENSG00000222445.1	+	misc_RNA	KNOWN	RN7SKP56	1	1	0.231395
chr6	125956781	125980244	125968512	ENSG00000111911.6	+	protein_coding	KNOWN	HINT3	1	5	-0.077108
chr6	125979812	125979934	125979873	ENSG00000251920.1	-	rRNA	KNOWN	RNA5SP216	1	1	-0.461087
chr6	125986430	126039276	126012853	ENSG00000066651.17	+	protein_coding	KNOWN	TRMT11	11	15	-0.487374
chr6	126177193	126202239	126189716	ENSG00000231842.1	+	lincRNA	KNOWN	RP11-527F13.1	1	4	-0.504233
chr6	126257921	126258355	126258138	ENSG00000213133.4	-	processed_pseudogene	KNOWN	PPP1R14BP5	1	1	-0.565727
chr6	126340174	126348875	126344524	ENSG00000203760.8	+	protein_coding	KNOWN	CENPW	3	3	-0.500465
chr6	126484631	126484713	126484672	ENSG00000207632.1	+	miRNA	KNOWN	MIR588	1	1	-0.727436
chr6	126590287	126590393	126590340	ENSG00000201613.1	-	snRNA	KNOWN	RNU6-200P	1	1	-0.774152
chr6	126602356	126603649	126603002	ENSG00000220548.3	-	processed_pseudogene	KNOWN	VIM2P	1	1	-0.774152
chr6	126627484	126628570	126628027	ENSG00000275953.1	-	processed_pseudogene	KNOWN	RP11-753G20.2	1	1	-0.642197
chr6	126643488	126644390	126643939	ENSG00000217325.2	+	transcribed_processed_pseudogene	KNOWN	PRELID1P1	2	1	-0.294191
chr6	126683036	126683847	126683441	ENSG00000217404.2	+	processed_pseudogene	KNOWN	RPS4XP9	1	2	-0.555435
chr6	127118604	127197765	127158184	ENSG00000146374.13	+	protein_coding	KNOWN	RSPO3	3	6	-0.622522
chr6	127266610	127288567	127277588	ENSG00000118518.15	+	protein_coding	KNOWN	RNF146	15	5	-0.443447
chr6	127288710	127343609	127316159	ENSG00000093144.18	-	protein_coding	KNOWN	ECHDC1	23	7	-0.439093
chr6	127317883	127317973	127317928	ENSG00000251768.1	-	rRNA	KNOWN	RNA5SP217	1	1	-0.573024
chr6	127355756	127356789	127356272	ENSG00000213131.3	+	processed_pseudogene	KNOWN	YWHAZP4	1	2	-0.010491
chr6	127362513	127363403	127362958	ENSG00000220744.1	+	processed_pseudogene	KNOWN	RPL5P18	1	1	-0.010491
chr6	127416535	127416952	127416743	ENSG00000220522.2	-	processed_pseudogene	KNOWN	RP1-177A13.1	1	1	-0.354073
chr6	127435636	127436189	127435912	ENSG00000220694.2	+	processed_pseudogene	KNOWN	RP3-403A15.1	1	1	-0.294363
chr6	127438406	127519001	127478703	ENSG00000255330.9	-	protein_coding	KNOWN	RP3-403A15.5	4	12	-0.458070
chr6	127440343	127459391	127449867	ENSG00000189367.14	-	protein_coding	KNOWN	KIAA0408	5	6	-0.482130
chr6	127472794	127519191	127495992	ENSG00000214338.10	-	protein_coding	KNOWN	SOGA3	3	7	-0.413470
chr6	127519455	127591817	127555636	ENSG00000184530.8	+	protein_coding	KNOWN	C6orf58	2	6	-0.402909
chr6	127632958	127635321	127634139	ENSG00000219284.2	-	unprocessed_pseudogene	KNOWN	RP11-151M7.1	1	3	-1.193410
chr6	127654860	127655278	127655069	ENSG00000218187.2	-	processed_pseudogene	KNOWN	RP11-325O24.1	1	1	-0.502955
chr6	127659424	127660338	127659881	ENSG00000260212.1	+	unprocessed_pseudogene	KNOWN	RP11-325O24.5	1	2	-0.502955
chr6	127659690	127660579	127660134	ENSG00000219699.2	-	unprocessed_pseudogene	KNOWN	RP11-325O24.2	1	2	-0.502955
chr6	127664554	127681555	127673054	ENSG00000281248.1	+	lincRNA	KNOWN	RP11-325O24.6	1	4	-0.290872
chr6	127708072	127918631	127813351	ENSG00000172673.10	-	protein_coding	KNOWN	THEMIS	6	7	-0.481348
chr6	127909833	127910052	127909942	ENSG00000274493.1	+	processed_pseudogene	KNOWN	MRPS17P5	1	1	-0.589383
chr6	127968779	128520674	128244726	ENSG00000152894.14	-	protein_coding	KNOWN	PTPRK	22	34	-0.356529
chr6	128027886	128085248	128056567	ENSG00000227945.1	+	antisense	KNOWN	RP11-103C16.2	1	5	-0.388149
chr6	128500527	128501176	128500851	ENSG00000224733.1	+	antisense	KNOWN	RP1-86D1.5	1	2	0.091992
chr6	128556485	128556566	128556525	ENSG00000273790.2	-	miRNA	NOVEL	AL137006.1	1	1	-0.589647
chr6	128580113	128580884	128580498	ENSG00000213130.3	-	processed_pseudogene	KNOWN	EEF1DP5	1	1	-0.206349
chr6	128584390	128584491	128584440	ENSG00000206982.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.206349
chr6	128639188	128639653	128639420	ENSG00000220110.1	-	processed_pseudogene	KNOWN	RP1-6P5.2	1	1	-0.571581
chr6	128761717	128761808	128761762	ENSG00000202200.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.325861
chr6	128883141	129516569	129199855	ENSG00000196569.11	+	protein_coding	KNOWN	LAMA2	6	65	-0.315130
chr6	128928995	128929988	128929491	ENSG00000220884.2	-	processed_pseudogene	KNOWN	MESTP1	1	1	-0.353419
chr6	129157523	129159120	129158321	ENSG00000219642.2	-	processed_pseudogene	KNOWN	BMPR1APS1	1	1	-0.446222
chr6	129436875	129436980	129436927	ENSG00000252554.1	-	snRNA	KNOWN	RNU6-861P	1	1	-0.528160
chr6	129479615	129481410	129480512	ENSG00000233351.1	-	antisense	KNOWN	RP1-69D17.3	1	2	-0.688442
chr6	129526626	129552587	129539606	ENSG00000226149.5	-	lincRNA	KNOWN	RP1-69D17.4	2	7	-0.229375
chr6	129576132	129710225	129643178	ENSG00000146376.10	-	protein_coding	KNOWN	ARHGAP18	3	15	-0.003907
chr6	129747737	129747819	129747778	ENSG00000276301.2	+	miRNA	NOVEL	Z97352.1	1	1	0.048138
chr6	129756298	129757112	129756705	ENSG00000218689.2	-	processed_pseudogene	KNOWN	RPL5P21	1	1	-0.232011
chr6	129783769	129784045	129783907	ENSG00000219666.2	-	processed_pseudogene	KNOWN	RP11-174C7.1	1	1	-0.255279
chr6	129800908	129802214	129801561	ENSG00000218725.2	+	processed_pseudogene	KNOWN	B3GALNT2P1	1	2	-0.247032
chr6	129819637	129820170	129819903	ENSG00000219302.2	-	processed_pseudogene	KNOWN	RP11-174C7.3	1	1	-0.259481
chr6	129831244	129861547	129846395	ENSG00000203756.7	-	protein_coding	KNOWN	TMEM244	2	6	-0.271996
chr6	130013699	130141451	130077575	ENSG00000198945.7	+	protein_coding	KNOWN	L3MBTL3	10	25	-0.250325
chr6	130133410	130146179	130139794	ENSG00000227678.7	-	antisense	KNOWN	RP11-73O6.3	6	5	-0.103139
chr6	130144315	130365425	130254870	ENSG00000164483.16	-	protein_coding	KNOWN	SAMD3	15	14	-0.286297
chr6	130365734	130443063	130404398	ENSG00000164484.11	+	protein_coding	KNOWN	TMEM200A	4	3	-0.105211
chr6	130434265	130434353	130434309	ENSG00000266556.1	+	miRNA	NOVEL	AL137251.1	1	1	-0.133183
chr6	130573996	130574112	130574054	ENSG00000202438.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.206975
chr6	130697312	130697778	130697545	ENSG00000229923.2	+	lincRNA	KNOWN	RP11-102N11.1	1	2	-0.452014
chr6	130827406	130837135	130832270	ENSG00000256162.2	+	protein_coding	KNOWN	SMLR1	1	2	-0.304780
chr6	130839347	131063322	130951334	ENSG00000079819.16	-	protein_coding	KNOWN	EPB41L2	33	20	-0.120508
chr6	131135666	131283535	131209600	ENSG00000118507.15	+	protein_coding	KNOWN	AKAP7	10	8	-0.342328
chr6	131184325	131185486	131184905	ENSG00000218857.1	-	processed_pseudogene	KNOWN	RP1-209B5.2	1	1	-0.121787
chr6	131469059	131469536	131469297	ENSG00000219776.2	+	processed_pseudogene	KNOWN	RPL21P67	1	1	-0.121182
chr6	131573144	131584332	131578738	ENSG00000118520.13	+	protein_coding	KNOWN	ARG1	6	8	-0.176943
chr6	131573966	131628229	131601097	ENSG00000112282.17	-	protein_coding	KNOWN	MED23	9	31	-0.262070
chr6	131628442	131747418	131687930	ENSG00000154269.14	+	protein_coding	KNOWN	ENPP3	7	26	-0.193693
chr6	131642818	131642966	131642892	ENSG00000252560.1	-	snRNA	KNOWN	RNU4-18P	1	1	-0.163509
chr6	131700469	131701401	131700935	ENSG00000180658.3	-	protein_coding	KNOWN	OR2A4	1	1	-0.154520
chr6	131708684	131711017	131709850	ENSG00000236761.5	-	protein_coding	KNOWN	CTAGE9	1	1	-0.172678
chr6	131780721	131781312	131781016	ENSG00000216917.2	-	processed_pseudogene	KNOWN	RP5-988G15.1	1	1	-0.198350
chr6	131792172	131792231	131792201	ENSG00000266807.1	+	miRNA	KNOWN	MIR548H5	1	1	0.115324
chr6	131808016	131895155	131851585	ENSG00000197594.11	+	protein_coding	KNOWN	ENPP1	4	25	-0.028176
chr6	131819803	131820091	131819947	ENSG00000219532.2	-	processed_pseudogene	KNOWN	RP3-323K23.3	1	1	0.040766
chr6	131820334	131820653	131820493	ENSG00000200895.1	+	misc_RNA	KNOWN	RN7SKP245	1	1	0.040766
chr6	131825981	131828413	131827197	ENSG00000237115.2	-	processed_pseudogene	KNOWN	RP1-131F15.2	1	1	0.040766
chr6	131901963	131920565	131911264	ENSG00000236673.5	+	lincRNA	KNOWN	RP11-69I8.2	3	3	0.139425
chr6	131910191	131911527	131910859	ENSG00000280058.1	+	TEC	KNOWN	RP1-131F15.3	1	1	0.203637
chr6	131948176	131951373	131949774	ENSG00000118523.5	-	protein_coding	KNOWN	CTGF	1	5	0.236254
chr6	131950946	132077393	132014169	ENSG00000227220.1	+	antisense	KNOWN	RP11-69I8.3	1	2	-0.062150
chr6	132085084	132099279	132092181	ENSG00000236166.1	+	lincRNA	KNOWN	RP3-523C21.2	2	2	0.097778
chr6	132115192	132115263	132115227	ENSG00000265669.1	-	miRNA	KNOWN	MIR548AJ1	1	1	0.001321
chr6	132130252	132131795	132131023	ENSG00000280155.1	-	TEC	KNOWN	RP3-523C21.3	1	1	-0.092433
chr6	132131915	132169374	132150644	ENSG00000228495.1	+	lincRNA	KNOWN	LINC01013	5	4	-0.011257
chr6	132271982	132273332	132272657	ENSG00000223912.1	+	processed_pseudogene	KNOWN	EEF1A1P36	1	1	0.225848
chr6	132296055	132401545	132348800	ENSG00000079931.14	-	protein_coding	KNOWN	MOXD1	4	12	-0.309809
chr6	132445867	132513198	132479532	ENSG00000079950.13	-	protein_coding	KNOWN	STX7	4	10	-0.124504
chr6	132518830	132519295	132519062	ENSG00000225343.1	-	processed_pseudogene	KNOWN	RPL21P66	1	1	-0.216498
chr6	132538290	132539336	132538813	ENSG00000237110.2	+	protein_coding	KNOWN	TAAR9	1	1	-0.369456
chr6	132552693	132553721	132553207	ENSG00000146385.1	+	protein_coding	KNOWN	TAAR8	1	1	-0.818457
chr6	132559024	132559265	132559144	ENSG00000235998.1	+	unitary_pseudogene	KNOWN	TAAR7P	1	1	-0.818457
chr6	132570322	132571359	132570840	ENSG00000146383.7	+	protein_coding	KNOWN	TAAR6	1	1	-0.573344
chr6	132588673	132589686	132589179	ENSG00000135569.4	-	protein_coding	KNOWN	TAAR5	1	1	-0.573344
chr6	132594398	132595436	132594917	ENSG00000237449.1	-	unitary_pseudogene	KNOWN	TAAR4P	1	1	-0.313460
chr6	132608225	132609302	132608763	ENSG00000179073.6	-	unitary_pseudogene	KNOWN	TAAR3	2	1	-0.313460
chr6	132617022	132624275	132620648	ENSG00000146378.6	-	protein_coding	KNOWN	TAAR2	2	2	-0.598324
chr6	132644984	132646003	132645493	ENSG00000146399.1	-	protein_coding	KNOWN	TAAR1	1	1	-0.297955
chr6	132674885	132675383	132675134	ENSG00000218194.1	+	processed_pseudogene	KNOWN	HLFP1	1	1	-0.203833
chr6	132681590	132714049	132697819	ENSG00000112299.7	-	protein_coding	KNOWN	VNN1	1	7	-0.273564
chr6	132698783	132699667	132699225	ENSG00000218991.1	+	processed_pseudogene	KNOWN	CCNG1P1	1	1	-0.312850
chr6	132722787	132734765	132728776	ENSG00000093134.13	-	protein_coding	KNOWN	VNN3	15	8	-0.189783
chr6	132743870	132763459	132753664	ENSG00000112303.13	-	protein_coding	KNOWN	VNN2	16	8	-0.145925
chr6	132752675	132753951	132753313	ENSG00000234484.1	+	antisense	KNOWN	RP1-55C23.7	1	2	-0.149766
chr6	132764660	132765458	132765059	ENSG00000271488.1	+	processed_pseudogene	KNOWN	RBM11P1	1	1	-0.149766
chr6	132769370	132798553	132783961	ENSG00000146409.10	-	protein_coding	KNOWN	SLC18B1	3	14	-0.368905
chr6	132814441	132817564	132816002	ENSG00000112306.7	+	protein_coding	KNOWN	RPS12	2	6	-0.000574
chr6	132815307	132815379	132815343	ENSG00000206754.1	+	snoRNA	KNOWN	SNORD101	1	1	-0.000574
chr6	132816802	132816877	132816839	ENSG00000221500.1	+	snoRNA	KNOWN	SNORD100	1	1	-0.000574
chr6	132817219	132817348	132817283	ENSG00000200534.1	+	snoRNA	KNOWN	SNORA33	1	1	-0.000574
chr6	132868218	132868859	132868538	ENSG00000220557.1	-	processed_pseudogene	KNOWN	HMGB1P13	1	1	-0.299330
chr6	132891924	132893819	132892871	ENSG00000279960.1	+	TEC	KNOWN	RP5-1181K21.4	1	1	-0.685616
chr6	132997551	132998040	132997795	ENSG00000213122.4	-	processed_pseudogene	KNOWN	RPL23AP46	1	1	-0.488632
chr6	133088080	133106578	133097329	ENSG00000231023.6	+	lincRNA	KNOWN	LINC00326	2	6	-0.503824
chr6	133150568	133150816	133150692	ENSG00000220113.2	+	processed_pseudogene	KNOWN	MTCYBP4	1	1	-0.496752
chr6	133240598	133532120	133386359	ENSG00000112319.17	+	protein_coding	KNOWN	EYA4	14	20	-0.591859
chr6	133435077	133439464	133437270	ENSG00000223542.1	-	antisense	KNOWN	RP1-283K11.3	1	2	-0.521950
chr6	133452857	133456605	133454731	ENSG00000234567.1	-	antisense	KNOWN	RP1-283K11.2	1	3	-0.518062
chr6	133502252	133892802	133697527	ENSG00000227954.6	-	antisense	KNOWN	TARID	11	9	-0.242562
chr6	133510386	133510693	133510539	ENSG00000238059.1	-	processed_pseudogene	KNOWN	HSPE1P21	1	1	-0.389877
chr6	133540784	133541174	133540979	ENSG00000272428.1	+	lincRNA	KNOWN	RP11-704J17.5	1	1	-0.364386
chr6	133676729	133677429	133677079	ENSG00000218213.1	-	processed_pseudogene	KNOWN	FTH1P26	1	1	-0.218650
chr6	133821147	133851800	133836473	ENSG00000223586.5	+	lincRNA	KNOWN	LINC01312	2	3	0.014913
chr6	133889138	133895553	133892345	ENSG00000118526.6	+	protein_coding	KNOWN	TCF21	2	3	-0.325343
chr6	133952170	133990432	133971301	ENSG00000028839.9	+	protein_coding	KNOWN	TBPL1	8	7	-0.126298
chr6	133988697	134052636	134020666	ENSG00000146411.5	-	protein_coding	KNOWN	SLC2A12	1	5	0.018376
chr6	134009033	134009218	134009125	ENSG00000278744.1	+	processed_pseudogene	KNOWN	CTA-444M12.3	1	1	0.152292
chr6	134115235	134115736	134115485	ENSG00000216753.3	-	processed_pseudogene	KNOWN	HMGA1P7	1	1	0.027141
chr6	134133573	134133868	134133720	ENSG00000266875.2	+	misc_RNA	KNOWN	RN7SL408P	1	1	-0.107617
chr6	134169246	134318112	134243679	ENSG00000118515.11	-	protein_coding	KNOWN	SGK1	30	14	0.109004
chr6	134211450	134211527	134211488	ENSG00000276703.1	+	processed_pseudogene	KNOWN	RP1-188K17.2	1	1	0.126343
chr6	134257035	134257143	134257089	ENSG00000200058.1	+	rRNA	KNOWN	RNA5SP218	1	1	-0.000520
chr6	134283092	134283193	134283142	ENSG00000201309.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.016540
chr6	134296997	134298695	134297846	ENSG00000220378.3	-	processed_pseudogene	KNOWN	KRT8P42	1	2	0.247270
chr6	134393142	134393900	134393521	ENSG00000213118.4	-	processed_pseudogene	KNOWN	CHCHD2P4	1	2	0.193275
chr6	134428240	134520585	134474412	ENSG00000231971.5	-	lincRNA	KNOWN	RP11-557H15.3	2	5	-0.030363
chr6	134437716	134504581	134471148	ENSG00000236700.5	+	lincRNA	KNOWN	LINC01010	3	3	-0.013507
chr6	134525314	134659836	134592575	ENSG00000232310.6	-	lincRNA	KNOWN	RP11-557H15.4	5	4	-0.002092
chr6	134603564	134604698	134604131	ENSG00000218772.2	-	processed_pseudogene	KNOWN	FAM8A6P	1	1	0.343531
chr6	134606299	134609437	134607868	ENSG00000229722.1	-	lincRNA	KNOWN	RP11-557H15.5	1	2	0.343531
chr6	134636489	134642495	134639492	ENSG00000227723.1	+	lincRNA	KNOWN	CTA-31J9.2	1	3	0.109479
chr6	134706060	134707349	134706704	ENSG00000236389.1	-	lincRNA	KNOWN	RP1-287H17.1	1	2	0.022029
chr6	134715176	134715266	134715221	ENSG00000277231.1	-	miRNA	NOVEL	AL121970.1	1	1	-0.069896
chr6	134897874	134898759	134898316	ENSG00000213117.4	+	processed_pseudogene	KNOWN	RP3-352A20.1	1	1	-0.181870
chr6	134917390	134950122	134933756	ENSG00000118514.13	-	protein_coding	KNOWN	ALDH8A1	6	7	0.192125
chr6	134941392	134942450	134941921	ENSG00000240056.2	+	antisense	KNOWN	RP11-349J5.2	1	2	0.137795
chr6	134960378	135103056	135031717	ENSG00000112339.14	-	protein_coding	KNOWN	HBS1L	16	18	-0.196854
chr6	135055033	135060550	135057791	ENSG00000232876.1	+	antisense	KNOWN	CTA-212D2.2	1	2	-0.026190
chr6	135181315	135219173	135200244	ENSG00000118513.18	+	protein_coding	KNOWN	MYB	42	17	-0.201048
chr6	135195083	135195995	135195539	ENSG00000236703.1	-	antisense	KNOWN	MYB-AS1	1	2	-0.169206
chr6	135239160	135239256	135239208	ENSG00000207689.1	+	miRNA	KNOWN	MIR548A2	1	1	0.057640
chr6	135259996	135260933	135260464	ENSG00000224374.1	+	antisense	KNOWN	RP1-32B1.4	1	2	-0.029753
chr6	135283532	135497776	135390654	ENSG00000135541.20	-	protein_coding	KNOWN	AHI1	17	29	-0.397491
chr6	135301568	135307158	135304363	ENSG00000234084.1	+	antisense	KNOWN	RP3-388E23.2	1	3	-0.584659
chr6	135474504	135474609	135474556	ENSG00000201012.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.628854
chr6	135497801	135716055	135606928	ENSG00000231028.8	+	lincRNA	KNOWN	LINC00271	7	5	-0.327069
chr6	135619165	135620171	135619668	ENSG00000226540.2	-	processed_pseudogene	KNOWN	GAPDHP73	1	1	-0.347430
chr6	135629405	135630268	135629836	ENSG00000233534.1	-	lincRNA	KNOWN	RP1-38C16.2	1	2	-0.388299
chr6	135636086	135636713	135636399	ENSG00000217482.2	-	processed_pseudogene	KNOWN	HMGB1P17	1	1	-0.478544
chr6	135807148	135808466	135807807	ENSG00000236378.1	-	lincRNA	KNOWN	RP11-394G3.2	1	2	-0.227998
chr6	135851696	136195574	136023635	ENSG00000171408.13	+	protein_coding	KNOWN	PDE7B	3	13	-0.134821
chr6	135914755	135914847	135914801	ENSG00000238921.2	+	miRNA	NOVEL	AL360178.1	1	1	0.130724
chr6	135977811	135977903	135977857	ENSG00000222121.1	-	miRNA	NOVEL	AL512290.1	1	1	-0.108827
chr6	135991936	136225751	136108843	ENSG00000237596.6	-	antisense	KNOWN	RP13-143G15.4	15	8	-0.097649
chr6	136034553	136034886	136034719	ENSG00000213111.5	-	transcribed_processed_pseudogene	KNOWN	COX5BP2	1	1	-0.163005
chr6	136206478	136206860	136206669	ENSG00000277973.1	+	processed_pseudogene	KNOWN	RP11-472E5.3	1	1	-0.115700
chr6	136231024	136250335	136240679	ENSG00000146410.11	-	protein_coding	KNOWN	MTFR2	7	9	-0.239404
chr6	136256863	136289851	136273357	ENSG00000029363.15	-	protein_coding	KNOWN	BCLAF1	23	15	-0.215156
chr6	136317961	136318236	136318098	ENSG00000216519.2	+	processed_pseudogene	KNOWN	RP3-406A7.1	1	1	-0.258505
chr6	136335714	136336087	136335900	ENSG00000260418.1	-	lincRNA	KNOWN	RP3-406A7.7	1	1	-0.166320
chr6	136342281	136550819	136446550	ENSG00000135525.18	-	protein_coding	KNOWN	MAP7	9	19	-0.292697
chr6	136343193	136343249	136343221	ENSG00000276943.1	-	miRNA	NOVEL	AL023284.1	1	1	-0.166320
chr6	136364129	136365079	136364604	ENSG00000220660.2	+	transcribed_processed_pseudogene	KNOWN	RP3-406A7.3	2	2	-0.246331
chr6	136419847	136420425	136420136	ENSG00000216613.2	-	processed_pseudogene	KNOWN	RP3-406A7.5	1	1	-0.200985
chr6	136475862	136476150	136476006	ENSG00000218424.2	-	processed_pseudogene	KNOWN	NDUFS5P1	1	1	-0.479915
chr6	136545192	136545492	136545342	ENSG00000271765.1	+	misc_RNA	KNOWN	RN7SKP299	1	1	-0.006923
chr6	136550661	136552554	136551607	ENSG00000272189.1	+	antisense	KNOWN	RP3-325F22.5	1	1	0.027452
chr6	136557047	136792518	136674782	ENSG00000197442.9	-	protein_coding	KNOWN	MAP3K5	2	30	-0.165010
chr6	136629172	136647999	136638585	ENSG00000234263.1	+	antisense	KNOWN	RP3-325F22.3	1	3	-0.350160
chr6	136630243	136630355	136630299	ENSG00000212242.1	+	rRNA	KNOWN	RNA5SP219	1	1	-0.382327
chr6	136822564	136913937	136868250	ENSG00000112357.12	+	protein_coding	KNOWN	PEX7	3	10	-0.313706
chr6	136855349	136855457	136855403	ENSG00000277822.1	-	miRNA	NOVEL	AL121933.1	1	1	-0.265821
chr6	136855698	136855831	136855764	ENSG00000201807.1	-	snoRNA	NOVEL	SNORA27	1	1	-0.265821
chr6	136900233	136901529	136900881	ENSG00000213109.4	-	transcribed_processed_pseudogene	KNOWN	RP11-55K22.2	2	1	-0.488783
chr6	136922264	136925639	136923951	ENSG00000182747.4	+	protein_coding	KNOWN	SLC35D3	1	2	-0.484655
chr6	136934765	136934866	136934815	ENSG00000207247.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.308249
chr6	136973930	136974217	136974073	ENSG00000230350.1	-	processed_pseudogene	KNOWN	RPL35AP3	1	1	-0.249565
chr6	136982165	136993234	136987699	ENSG00000225391.5	-	lincRNA	KNOWN	NHEG1	2	3	-0.308149
chr6	136995170	136999504	136997337	ENSG00000235399.1	+	antisense	KNOWN	RP11-204P2.3	1	2	-0.450019
chr6	136999971	137045180	137022575	ENSG00000016402.13	-	protein_coding	KNOWN	IL20RA	8	7	-0.328529
chr6	137143820	137173648	137158734	ENSG00000164485.14	-	protein_coding	KNOWN	IL22RA2	3	7	-0.266068
chr6	137197484	137219449	137208466	ENSG00000027697.12	-	protein_coding	KNOWN	IFNGR1	5	8	-0.245707
chr6	137492202	137494250	137493226	ENSG00000177468.6	-	protein_coding	KNOWN	OLIG3	1	1	-0.429777
chr6	137543897	137544372	137544134	ENSG00000213108.3	-	processed_pseudogene	KNOWN	BTF3L4P3	1	1	-0.669848
chr6	137673460	137674554	137674007	ENSG00000230533.1	+	lincRNA	KNOWN	RP11-95M15.1	1	3	-0.479915
chr6	137705423	137707201	137706312	ENSG00000220412.1	-	processed_pseudogene	KNOWN	RP11-95M15.2	1	1	-0.221669
chr6	137716950	137717079	137717014	ENSG00000251969.3	+	miRNA	NOVEL	AL357060.1	1	1	-0.247214
chr6	137730170	137738983	137734576	ENSG00000234956.5	-	lincRNA	KNOWN	RP11-356I2.1	2	3	-0.296170
chr6	137784374	137784486	137784430	ENSG00000207300.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.264152
chr6	137823673	137868233	137845953	ENSG00000237499.6	-	antisense	KNOWN	RP11-356I2.4	6	4	-0.177996
chr6	137867188	137883312	137875250	ENSG00000118503.14	+	protein_coding	KNOWN	TNFAIP3	11	9	-0.090664
chr6	137943079	137945802	137944440	ENSG00000226004.1	-	lincRNA	KNOWN	RP11-10J5.1	1	2	-0.105689
chr6	137945366	137972522	137958944	ENSG00000229922.5	+	lincRNA	KNOWN	RP11-240M16.1	2	2	-0.263108
chr6	137995270	137996147	137995708	ENSG00000219463.1	+	processed_pseudogene	KNOWN	RPSAP42	1	1	-0.325676
chr6	138088505	138107511	138098008	ENSG00000112378.11	-	protein_coding	KNOWN	PERP	1	3	-0.182315
chr6	138161921	138344663	138253292	ENSG00000112379.8	+	protein_coding	KNOWN	ARFGEF3	1	34	-0.315239
chr6	138215986	138218491	138217238	ENSG00000254440.3	-	protein_coding	KNOWN	PBOV1	1	1	-0.769877
chr6	138377905	138383075	138380490	ENSG00000262543.1	+	lincRNA	KNOWN	RP3-422G23.4	1	2	-0.233883
chr6	138393373	138393544	138393458	ENSG00000218499.1	+	processed_pseudogene	KNOWN	RP3-422G23.3	1	1	-0.154923
chr6	138402585	138403560	138403072	ENSG00000215878.3	-	processed_pseudogene	KNOWN	MARCKSL1P2	1	1	-0.154923
chr6	138403531	138422197	138412864	ENSG00000051620.10	+	protein_coding	KNOWN	HEBP2	4	4	-0.115084
chr6	138422043	138692571	138557307	ENSG00000135540.11	-	protein_coding	KNOWN	NHSL1	9	8	-0.122394
chr6	138435213	138435294	138435253	ENSG00000266555.1	-	miRNA	KNOWN	MIR3145	1	1	-0.302287
chr6	138464099	138464383	138464241	ENSG00000274594.1	+	processed_pseudogene	KNOWN	RP11-43P8.2	1	1	-0.325464
chr6	138650226	138650973	138650599	ENSG00000216802.1	-	processed_pseudogene	KNOWN	RP11-390P2.2	1	1	-0.352310
chr6	138692548	138697288	138694918	ENSG00000225177.5	+	antisense	KNOWN	RP11-390P2.4	4	3	-0.069896
chr6	138725211	138773652	138749431	ENSG00000279968.1	-	protein_coding	KNOWN	GVQW2	2	5	0.082799
chr6	138773509	138793319	138783414	ENSG00000024862.16	+	protein_coding	KNOWN	CCDC28A	4	7	-0.005124
chr6	138795926	138904070	138849998	ENSG00000203734.11	+	protein_coding	KNOWN	ECT2L	5	22	-0.013612
chr6	138822747	138823799	138823273	ENSG00000225415.2	+	processed_pseudogene	KNOWN	RP3-509I19.1	1	1	-0.408082
chr6	138859027	138859133	138859080	ENSG00000206856.1	-	snRNA	KNOWN	RNU6-427P	1	1	0.023973
chr6	138878899	138879407	138879153	ENSG00000220600.2	-	transcribed_processed_pseudogene	KNOWN	RP3-509I19.6	2	1	0.059202
chr6	138903493	138988261	138945877	ENSG00000135597.18	-	protein_coding	KNOWN	REPS1	21	20	-0.240102
chr6	139028682	139043302	139035992	ENSG00000146386.7	+	protein_coding	KNOWN	ABRACL	2	3	-0.187090
chr6	139135112	139180802	139157957	ENSG00000112406.4	+	protein_coding	KNOWN	HECA	1	4	0.062212
chr6	139144204	139239653	139191928	ENSG00000231329.7	-	antisense	KNOWN	RP1-225E12.2	16	5	-0.055427
chr6	139159157	139277181	139218169	ENSG00000272446.5	-	processed_transcript	KNOWN	RP1-225E12.3	5	9	-0.140508
chr6	139240061	139292139	139266100	ENSG00000164440.14	-	protein_coding	KNOWN	TXLNB	2	10	-0.307960
chr6	139271362	139287307	139279334	ENSG00000226571.1	+	antisense	KNOWN	RP11-445F6.2	2	4	-0.439390
chr6	139338018	139339580	139338799	ENSG00000218565.2	+	processed_pseudogene	KNOWN	RP11-12A2.1	1	2	-0.338643
chr6	139371807	139374620	139373213	ENSG00000164442.9	-	protein_coding	KNOWN	CITED2	4	3	0.263677
chr6	139468995	139474596	139471795	ENSG00000238099.2	-	lincRNA	KNOWN	LINC01625	1	4	-0.065960
chr6	139614438	139615204	139614821	ENSG00000219806.1	-	processed_pseudogene	KNOWN	ATP5F1P6	1	1	-0.078893
chr6	139659928	139661513	139660720	ENSG00000205695.3	+	processed_pseudogene	KNOWN	RP11-15H7.2	1	1	-0.093120
chr6	139854850	139860151	139857500	ENSG00000231426.5	+	lincRNA	KNOWN	RP5-899B16.1	2	3	-0.037568
chr6	139856104	139877391	139866747	ENSG00000225148.1	-	lincRNA	KNOWN	RP5-899B16.2	1	2	0.001040
chr6	140067435	140093721	140080578	ENSG00000236013.5	+	lincRNA	KNOWN	RP3-332B22.1	3	3	-0.116404
chr6	140158591	140158694	140158642	ENSG00000252107.1	-	rRNA	KNOWN	RNA5SP220	1	1	-0.225623
chr6	140205252	140205326	140205289	ENSG00000263514.1	+	miRNA	KNOWN	MIR3668	1	1	-0.031067
chr6	140660623	140660713	140660668	ENSG00000221336.1	-	miRNA	NOVEL	AL356137.1	1	1	-0.223870
chr6	140683814	140683883	140683848	ENSG00000264390.1	+	miRNA	KNOWN	MIR4465	1	1	-0.130401
chr6	140761529	140762262	140761895	ENSG00000217684.2	+	processed_pseudogene	KNOWN	RPS3AP24	1	1	-0.123468
chr6	140845958	140852924	140849441	ENSG00000234147.1	-	lincRNA	KNOWN	RP3-460G2.2	1	2	-0.419838
chr6	140922457	140922910	140922683	ENSG00000216548.2	-	processed_pseudogene	KNOWN	RP11-471B18.1	1	1	-0.382380
chr6	141019788	141020026	141019907	ENSG00000275138.1	-	processed_pseudogene	KNOWN	RP11-432L12.1	1	1	-0.731851
chr6	141447011	141451006	141449008	ENSG00000259828.1	+	lincRNA	KNOWN	RP11-63E9.1	1	1	-0.579670
chr6	141486141	141486412	141486276	ENSG00000222764.1	-	misc_RNA	KNOWN	RN7SKP106	1	1	-0.242077
chr6	141635650	141636503	141636076	ENSG00000218351.2	-	transcribed_processed_pseudogene	KNOWN	RPS3AP23	2	1	-0.312075
chr6	142058330	142088799	142073564	ENSG00000135577.4	-	protein_coding	KNOWN	NMBR	2	3	-0.499695
chr6	142062717	142063053	142062885	ENSG00000270983.1	+	processed_pseudogene	KNOWN	RP11-137J7.3	1	1	-0.360520
chr6	142088233	142089219	142088726	ENSG00000236822.1	+	antisense	KNOWN	RP11-137J7.2	1	2	-0.586080
chr6	142133090	142135151	142134120	ENSG00000203733.5	+	protein_coding	KNOWN	GJE1	1	3	-0.362574
chr6	142147162	142224689	142185925	ENSG00000009844.15	+	protein_coding	KNOWN	VTA1	5	8	-0.232515
chr6	142183086	142183172	142183129	ENSG00000273631.1	-	miRNA	NOVEL	AL033522.1	1	1	-0.497297
chr6	142251847	142259632	142255739	ENSG00000237494.1	-	lincRNA	KNOWN	RP11-753B14.1	1	2	-0.147474
chr6	142301854	142446266	142374060	ENSG00000112414.14	+	protein_coding	KNOWN	ADGRG6	14	26	-0.215956
chr6	142526455	142637889	142582172	ENSG00000236366.2	-	lincRNA	KNOWN	RP11-440G9.1	2	4	-0.186942
chr6	142748443	142753759	142751101	ENSG00000233138.1	+	antisense	KNOWN	RP1-67K17.3	1	2	-0.117162
chr6	142751467	142945201	142848334	ENSG00000010818.8	-	protein_coding	KNOWN	HIVEP2	4	10	-0.131742
chr6	142788123	142794086	142791104	ENSG00000237851.1	+	lincRNA	KNOWN	RP1-67K17.4	1	2	-0.264793
chr6	142946047	142956698	142951372	ENSG00000224460.1	-	lincRNA	KNOWN	RP11-439L18.2	1	2	0.170666
chr6	142950211	142956646	142953428	ENSG00000232618.1	+	lincRNA	KNOWN	RP11-439L18.1	1	3	0.290676
chr6	142966421	143038077	143002249	ENSG00000229017.6	-	lincRNA	KNOWN	LINC01277	2	3	-0.254852
chr6	143039425	143042324	143040874	ENSG00000227192.1	-	lincRNA	KNOWN	RP1-45I4.3	1	2	0.043412
chr6	143060496	143340304	143200400	ENSG00000146416.16	+	protein_coding	KNOWN	AIG1	10	9	-0.134731
chr6	143094034	143099645	143096839	ENSG00000225752.1	-	antisense	KNOWN	RP1-45I4.2	1	2	0.021170
chr6	143298770	143299554	143299162	ENSG00000217495.2	-	processed_pseudogene	KNOWN	RP1-95L4.2	1	1	-0.169593
chr6	143327275	143327655	143327465	ENSG00000216642.1	+	processed_pseudogene	KNOWN	RP1-95L4.3	1	1	-0.213421
chr6	143342246	143343383	143342814	ENSG00000217648.1	+	processed_pseudogene	KNOWN	RP1-95L4.4	1	1	-0.272883
chr6	143386581	143387409	143386995	ENSG00000270655.1	+	processed_pseudogene	KNOWN	RP1-20N2.7	1	2	-0.092433
chr6	143422832	143450673	143436752	ENSG00000189007.15	-	protein_coding	KNOWN	ADAT2	3	6	-0.262737
chr6	143436216	143436710	143436463	ENSG00000218896.1	+	processed_pseudogene	KNOWN	TUBB8P2	1	1	-0.172655
chr6	143449603	143449668	143449635	ENSG00000278392.1	-	miRNA	NOVEL	AL031320.1	1	1	-0.172655
chr6	143449809	143449911	143449860	ENSG00000223203.1	+	rRNA	KNOWN	RNA5SP221	1	1	-0.172655
chr6	143450807	143490010	143470408	ENSG00000034693.14	+	protein_coding	KNOWN	PEX3	3	12	-0.341323
chr6	143484979	143507327	143496153	ENSG00000278206.1	+	processed_transcript	KNOWN	RP1-20N2.8	1	5	-0.447992
chr6	143490424	143506406	143498415	ENSG00000229036.7	+	transcribed_processed_pseudogene	KNOWN	VDAC1P8	14	5	-0.448577
chr6	143494811	143511690	143503250	ENSG00000001036.13	-	protein_coding	KNOWN	FUCA2	3	7	-0.402948
chr6	143536845	143831185	143684015	ENSG00000112419.14	+	protein_coding	KNOWN	PHACTR2	12	13	-0.123501
chr6	143554325	143562031	143558178	ENSG00000235740.1	-	antisense	KNOWN	PHACTR2-AS1	1	5	-0.080710
chr6	143807092	143844617	143825854	ENSG00000257065.1	+	protein_coding	KNOWN	RP3-468K18.5	1	5	0.028418
chr6	143843344	143863812	143853578	ENSG00000135521.8	+	protein_coding	KNOWN	LTV1	1	11	0.029304
chr6	143857318	143938471	143897894	ENSG00000280148.1	+	protein_coding	KNOWN	RP3-468K18.7	1	10	-0.182642
chr6	143858062	143858689	143858375	ENSG00000270890.1	-	processed_pseudogene	KNOWN	RP3-468K18.6	1	1	-0.018062
chr6	143864436	143938356	143901396	ENSG00000118491.9	+	protein_coding	KNOWN	ZC2HC1B	2	9	-0.198679
chr6	143940300	144064599	144002449	ENSG00000118495.18	-	protein_coding	KNOWN	PLAGL1	22	9	-0.151470
chr6	144004916	144008262	144006589	ENSG00000283122.1	-	non_coding	KNOWN	HYMAI	1	1	-0.121787
chr6	144007227	144007464	144007345	ENSG00000276680.1	+	misc_RNA	NOVEL	HYMAI	1	1	-0.121787
chr6	144036618	144037704	144037161	ENSG00000217231.2	+	processed_pseudogene	KNOWN	RP3-340H11.2	1	3	-0.034272
chr6	144094881	144095573	144095227	ENSG00000169976.6	-	protein_coding	KNOWN	SF3B5	1	1	-0.346892
chr6	144136450	144136775	144136612	ENSG00000219297.1	+	processed_pseudogene	KNOWN	MRPL42P3	1	1	-0.285765
chr6	144150526	144188370	144169448	ENSG00000135604.9	+	protein_coding	KNOWN	STX11	1	2	-0.027218
chr6	144200447	144200965	144200706	ENSG00000217027.1	-	processed_pseudogene	KNOWN	TPT1P4	1	1	-0.156445
chr6	144257034	144257624	144257329	ENSG00000216475.1	-	processed_pseudogene	KNOWN	RP1-91J24.1	1	1	-0.217693
chr6	144285701	144853034	144569367	ENSG00000152818.18	+	protein_coding	KNOWN	UTRN	13	74	-0.121824
chr6	144311699	144333301	144322500	ENSG00000225311.1	-	antisense	KNOWN	RP1-91J24.3	1	2	-0.027754
chr6	144397959	144398752	144398355	ENSG00000219409.2	+	processed_pseudogene	KNOWN	RP11-106E7.1	1	1	0.082342
chr6	144706733	144707047	144706890	ENSG00000217195.1	-	processed_pseudogene	KNOWN	RP11-277I20.2	1	1	0.016540
chr6	144708106	144708497	144708301	ENSG00000220739.2	-	processed_pseudogene	KNOWN	RP11-277I20.3	1	1	0.016540
chr6	145348758	145348849	145348803	ENSG00000221796.1	+	miRNA	NOVEL	AL356739.1	1	1	-0.252920
chr6	145463238	145463399	145463318	ENSG00000201119.1	-	snRNA	KNOWN	RNU1-33P	1	1	-0.308888
chr6	145489630	145492092	145490861	ENSG00000217612.2	-	processed_pseudogene	KNOWN	RP1-28C20.1	1	2	-0.501461
chr6	145501583	145736024	145618803	ENSG00000112425.13	-	protein_coding	KNOWN	EPM2A	8	6	-0.374364
chr6	145735570	145737218	145736394	ENSG00000270638.1	+	lincRNA	KNOWN	RP3-466P17.1	1	1	-0.395195
chr6	145736911	145737173	145737042	ENSG00000270828.1	-	lincRNA	KNOWN	RP3-466P17.2	1	1	-0.395195
chr6	145789760	145791832	145790796	ENSG00000280184.1	-	protein_coding	KNOWN	AL023806.1	1	1	-0.285678
chr6	145793502	145814753	145804127	ENSG00000118496.4	-	protein_coding	KNOWN	FBXO30	1	3	-0.302617
chr6	145799409	145886585	145842997	ENSG00000235652.7	+	antisense	KNOWN	RP11-545I5.3	12	4	-0.340687
chr6	145864245	145964423	145914334	ENSG00000146414.15	-	protein_coding	KNOWN	SHPRH	11	30	-0.429205
chr6	146027646	146437598	146232622	ENSG00000152822.13	+	protein_coding	KNOWN	GRM1	7	10	-0.624308
chr6	146171315	146171847	146171581	ENSG00000187103.3	+	processed_pseudogene	KNOWN	FUNDC2P3	1	1	-0.788861
chr6	146340420	146340524	146340472	ENSG00000222971.1	+	rRNA	KNOWN	RNA5SP222	1	1	-0.368370
chr6	146364931	146365494	146365212	ENSG00000216811.2	-	processed_pseudogene	KNOWN	RP1-69B13.2	1	1	-0.328226
chr6	146543693	146554965	146549329	ENSG00000118508.4	+	protein_coding	KNOWN	RAB32	1	3	-0.391058
chr6	146594516	146598931	146596723	ENSG00000237468.2	-	lincRNA	KNOWN	RP11-715G15.1	1	3	-0.342636
chr6	146598965	146815462	146707213	ENSG00000118492.16	+	protein_coding	KNOWN	ADGB	12	36	-0.623876
chr6	146638844	146639261	146639052	ENSG00000273719.1	-	processed_pseudogene	KNOWN	RP11-715G15.2	1	1	-0.565483
chr6	146802359	146803824	146803091	ENSG00000228283.3	-	transcribed_processed_pseudogene	KNOWN	KATNBL1P6	2	1	-0.602382
chr6	146841901	147204614	147023257	ENSG00000233452.6	-	antisense	KNOWN	STXBP5-AS1	9	11	-0.266723
chr6	146859181	146863081	146861131	ENSG00000227748.1	+	lincRNA	KNOWN	RP11-497D6.3	1	3	-0.386311
chr6	146948528	146951159	146949843	ENSG00000272397.1	-	lincRNA	KNOWN	RP11-497D6.5	1	2	-0.443887
chr6	147158925	147180992	147169958	ENSG00000196634.3	+	lincRNA	KNOWN	LUADT1	1	3	-0.186892
chr6	147204425	147390476	147297450	ENSG00000164506.14	+	protein_coding	KNOWN	STXBP5	7	28	-0.503917
chr6	147406531	147406824	147406677	ENSG00000273997.1	+	processed_pseudogene	KNOWN	RP11-361F15.5	1	1	-0.501688
chr6	147406889	147408281	147407585	ENSG00000220494.4	+	processed_pseudogene	KNOWN	YAP1P1	1	1	-0.501688
chr6	147508927	147737547	147623237	ENSG00000203727.3	+	protein_coding	KNOWN	SAMD5	2	2	-0.449064
chr6	147660703	147953937	147807320	ENSG00000227681.5	+	lincRNA	KNOWN	RP11-307P5.1	4	3	-0.545992
chr6	147741434	147743324	147742379	ENSG00000226249.1	-	lincRNA	KNOWN	RP11-307P5.2	1	2	-0.353808
chr6	148017422	148020974	148019198	ENSG00000234675.1	-	lincRNA	KNOWN	RP11-242F11.2	1	3	-0.415803
chr6	148133809	148137404	148135606	ENSG00000230205.1	-	lincRNA	KNOWN	RP11-631F7.2	1	2	-0.514344
chr6	148237585	148283408	148260496	ENSG00000224658.1	-	antisense	KNOWN	RP11-631F7.1	1	4	-0.098953
chr6	148272304	148552050	148412177	ENSG00000111961.16	+	protein_coding	KNOWN	SASH1	4	20	0.186129
chr6	148278672	148278778	148278725	ENSG00000207345.1	+	snRNA	KNOWN	RNU6-1222P	1	1	0.170418
chr6	148478693	148480763	148479728	ENSG00000215223.3	+	processed_pseudogene	KNOWN	CYP51A1P3	1	3	-0.135419
chr6	148524153	148524240	148524196	ENSG00000223322.2	-	miRNA	NOVEL	AL033378.1	1	1	0.322422
chr6	148567378	148567654	148567516	ENSG00000217824.1	-	processed_pseudogene	KNOWN	SNRPEP6	1	1	-0.195171
chr6	148647707	148648597	148648152	ENSG00000231368.1	-	processed_pseudogene	KNOWN	RPSAP40	1	1	-0.308888
chr6	148747328	149076990	148912159	ENSG00000111962.7	+	protein_coding	KNOWN	UST	3	8	0.069398
chr6	148955628	148964684	148960156	ENSG00000227660.1	-	antisense	KNOWN	UST-AS1	1	3	0.178501
chr6	149027700	149032573	149030136	ENSG00000236591.1	-	antisense	KNOWN	RP11-162J8.3	1	2	0.169164
chr6	149112009	149112672	149112340	ENSG00000219487.2	-	processed_pseudogene	KNOWN	RP11-365H23.1	1	1	-0.222117
chr6	149176707	149176794	149176750	ENSG00000263481.1	-	miRNA	NOVEL	AL603766.1	1	1	0.296191
chr6	149217926	149244072	149230999	ENSG00000228408.5	+	lincRNA	KNOWN	RP1-111D6.3	3	3	-0.016082
chr6	149218641	149411613	149315127	ENSG00000055208.17	+	protein_coding	KNOWN	TAB2	7	8	-0.138265
chr6	149243299	149244001	149243650	ENSG00000225924.1	-	antisense	KNOWN	RP1-111D6.2	1	2	-0.047072
chr6	149291352	149291646	149291499	ENSG00000241391.3	+	misc_RNA	KNOWN	RN7SL234P	1	1	-0.265330
chr6	149304107	149304428	149304267	ENSG00000216265.1	-	processed_pseudogene	KNOWN	FABP12P1	1	1	-0.265330
chr6	149400227	149401292	149400759	ENSG00000177688.6	+	protein_coding	KNOWN	SUMO4	1	1	-0.172711
chr6	149446795	149485061	149465928	ENSG00000178199.13	-	protein_coding	KNOWN	ZC3H12D	5	6	0.369764
chr6	149491567	149492289	149491928	ENSG00000219553.2	-	processed_pseudogene	KNOWN	RP1-281H8.3	1	1	0.099223
chr6	149504733	149546038	149525385	ENSG00000131013.3	-	protein_coding	KNOWN	PPIL4	2	13	-0.016926
chr6	149516956	149517017	149516986	ENSG00000252244.1	+	snRNA	KNOWN	RNU7-3P	1	1	-0.107946
chr6	149561152	149563949	149562550	ENSG00000235168.1	+	lincRNA	KNOWN	RP1-12G14.5	1	2	-0.113818
chr6	149566294	149591748	149579021	ENSG00000055211.12	+	protein_coding	KNOWN	GINM1	2	8	0.193449
chr6	149576089	149590864	149583476	ENSG00000281021.1	-	antisense	KNOWN	RP1-12G14.9	1	5	0.254391
chr6	149591755	149592663	149592209	ENSG00000233330.1	-	antisense	KNOWN	RP1-12G14.7	1	2	-0.115700
chr6	149594084	149594543	149594313	ENSG00000220848.4	+	processed_pseudogene	KNOWN	RPS18P9	1	1	-0.115700
chr6	149594625	149594759	149594692	ENSG00000202343.1	+	snoRNA	NOVEL	SNORA2	1	1	-0.115700
chr6	149594873	149648972	149621922	ENSG00000186625.13	-	protein_coding	KNOWN	KATNA1	8	11	0.084673
chr6	149631437	149631549	149631493	ENSG00000207292.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.438550
chr6	149658153	149718256	149688204	ENSG00000131023.12	-	protein_coding	KNOWN	LATS1	7	9	0.113653
chr6	149717621	149718888	149718254	ENSG00000278899.1	+	protein_coding	KNOWN	AL358852.1	1	1	0.138088
chr6	149724315	149749665	149736990	ENSG00000120253.13	-	protein_coding	KNOWN	NUP43	6	8	0.121033
chr6	149749443	149811420	149780431	ENSG00000120265.16	+	protein_coding	KNOWN	PCMT1	11	8	0.205997
chr6	149794763	149795746	149795254	ENSG00000219433.2	+	processed_pseudogene	KNOWN	BTBD10P2	1	2	0.275299
chr6	149796151	149826294	149811222	ENSG00000231760.4	-	antisense	KNOWN	RP11-350J20.5	3	2	0.107490
chr6	149818798	149864026	149841412	ENSG00000120256.9	-	protein_coding	KNOWN	LRP11	3	7	0.103615
chr6	149852462	149853192	149852827	ENSG00000273132.1	+	antisense	KNOWN	RP11-350J20.12	1	2	-0.053206
chr6	149863494	149919507	149891500	ENSG00000268592.3	+	antisense	KNOWN	RAET1E-AS1	1	2	0.238432
chr6	149879962	149881572	149880767	ENSG00000217733.2	+	processed_pseudogene	KNOWN	CCT7P1	1	1	0.489512
chr6	149883375	149898102	149890738	ENSG00000164520.11	-	protein_coding	KNOWN	RAET1E	7	5	0.307340
chr6	149884431	149919508	149901969	ENSG00000223701.3	+	antisense	KNOWN	RAET1E-AS1	2	3	0.189207
chr6	149904243	149906418	149905330	ENSG00000216906.2	+	processed_pseudogene	KNOWN	RP11-350J20.9	1	1	0.158419
chr6	149916878	149923121	149919999	ENSG00000203722.7	-	protein_coding	KNOWN	RAET1G	3	5	0.078120
chr6	149934527	149936782	149935654	ENSG00000216621.8	+	transcribed_processed_pseudogene	KNOWN	RP11-244K5.6	3	2	0.300435
chr6	149942000	149949235	149945617	ENSG00000131015.4	+	protein_coding	KNOWN	ULBP2	1	5	0.300435
chr6	149951833	149952239	149952036	ENSG00000215094.3	+	processed_pseudogene	KNOWN	RP11-244K5.7	1	1	0.258770
chr6	149964007	149973710	149968858	ENSG00000111981.4	+	protein_coding	KNOWN	ULBP1	1	5	0.250972
chr6	149977471	149979105	149978288	ENSG00000219298.1	+	processed_pseudogene	KNOWN	RP11-472G23.3	1	2	0.238381
chr6	149977922	149978416	149978169	ENSG00000231120.3	+	processed_pseudogene	KNOWN	BTF3P10	1	1	0.238381
chr6	149998019	150005157	150001588	ENSG00000218358.2	-	transcribed_unprocessed_pseudogene	KNOWN	RAET1K	2	4	0.055466
chr6	150018334	150025532	150021933	ENSG00000155918.7	-	protein_coding	KNOWN	RAET1L	2	5	0.191039
chr6	150032769	150033566	150033167	ENSG00000216444.1	+	processed_pseudogene	KNOWN	RAET1M	1	2	0.269990
chr6	150040547	150042033	150041290	ENSG00000235972.1	-	lincRNA	KNOWN	RP11-472G23.10	1	2	0.269990
chr6	150042546	150043353	150042949	ENSG00000213091.2	+	processed_pseudogene	KNOWN	PHBP1	1	1	0.269990
chr6	150063150	150069095	150066122	ENSG00000131019.10	-	protein_coding	KNOWN	ULBP3	2	5	0.272146
chr6	150143076	150250357	150196716	ENSG00000198729.4	+	protein_coding	KNOWN	PPP1R14C	1	4	0.027504
chr6	150164584	150164686	150164635	ENSG00000238594.1	+	snoRNA	NOVEL	snoU13	1	1	-0.192152
chr6	150326623	150326763	150326693	ENSG00000201628.1	-	snRNA	KNOWN	RNU4-7P	1	1	0.293250
chr6	150368892	150405969	150387430	ENSG00000009765.14	+	protein_coding	KNOWN	IYD	9	6	-0.236263
chr6	150384307	150385120	150384713	ENSG00000220598.1	-	processed_pseudogene	KNOWN	SSR1P1	1	1	-0.261240
chr6	150504811	150510300	150507555	ENSG00000219622.1	-	processed_pseudogene	KNOWN	RP11-291C6.1	1	3	-0.241409
chr6	150599863	150843665	150721764	ENSG00000120278.14	+	protein_coding	KNOWN	PLEKHG1	4	17	-0.245397
chr6	150600834	150605850	150603342	ENSG00000232891.1	+	sense_intronic	KNOWN	RP11-136K14.1	1	2	-0.479165
chr6	150624677	150626086	150625381	ENSG00000224029.1	+	sense_intronic	KNOWN	RP11-136K14.2	1	2	-0.162429
chr6	150650772	150652025	150651398	ENSG00000226599.1	-	lincRNA	KNOWN	RP11-136K14.3	1	2	-0.357811
chr6	150827663	150828384	150828023	ENSG00000213089.4	+	processed_pseudogene	KNOWN	PDCL3P5	1	1	-0.024150
chr6	150865549	151101887	150983718	ENSG00000120254.15	+	protein_coding	KNOWN	MTHFD1L	12	28	0.209030
chr6	150934968	150935566	150935267	ENSG00000218996.1	+	processed_pseudogene	KNOWN	RP1-99E18.2	1	1	0.248582
chr6	150939222	150939328	150939275	ENSG00000202119.1	+	snRNA	KNOWN	RNU6-302P	1	1	0.248582
chr6	151039916	151039971	151039943	ENSG00000221469.1	-	miRNA	NOVEL	AL133260.1	1	1	0.242234
chr6	151054897	151056057	151055477	ENSG00000232290.1	-	antisense	KNOWN	RP1-292B18.3	1	2	0.298443
chr6	151088103	151228447	151158275	ENSG00000223598.1	-	antisense	KNOWN	RP1-292B18.4	1	5	-0.015839
chr6	151099529	151099933	151099731	ENSG00000219747.1	+	processed_pseudogene	KNOWN	RP1-292B18.1	1	1	0.351859
chr6	151196681	151197638	151197159	ENSG00000231883.1	-	lincRNA	KNOWN	RP1-297M16.2	1	2	-0.418203
chr6	151201341	151201444	151201392	ENSG00000238616.1	+	snRNA	KNOWN	RNU6-300P	1	1	-0.418203
chr6	151225550	151225947	151225748	ENSG00000213087.3	-	processed_pseudogene	KNOWN	RP11-613F7.1	1	1	-0.171043
chr6	151239999	151358557	151299278	ENSG00000131016.16	+	protein_coding	KNOWN	AKAP12	5	5	-0.165498
chr6	151280515	151280612	151280563	ENSG00000252431.1	-	snRNA	KNOWN	RNU6-1247P	1	1	-0.126188
chr6	151298841	151298933	151298887	ENSG00000252487.1	-	misc_RNA	KNOWN	RNY4P20	1	1	-0.188686
chr6	151319635	151319950	151319792	ENSG00000223039.1	+	misc_RNA	KNOWN	RN7SKP268	1	1	-0.007544
chr6	151364117	151391548	151377832	ENSG00000181472.4	-	protein_coding	KNOWN	ZBTB2	1	3	0.059233
chr6	151378000	151378099	151378049	ENSG00000252615.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.033098
chr6	151404763	151452181	151428472	ENSG00000155906.16	-	protein_coding	KNOWN	RMND1	5	12	-0.090685
chr6	151411259	151413945	151412602	ENSG00000219395.2	-	processed_pseudogene	KNOWN	HSPA8P15	1	2	0.195370
chr6	151452258	151470101	151461179	ENSG00000146476.10	+	protein_coding	KNOWN	ARMT1	4	5	0.261948
chr6	151494030	151621193	151557611	ENSG00000120262.9	+	protein_coding	KNOWN	CCDC170	3	11	-0.357102
chr6	151615773	151615879	151615826	ENSG00000207422.1	-	snRNA	KNOWN	RNU6-813P	1	1	-0.347430
chr6	151656691	152129619	151893155	ENSG00000091831.21	+	protein_coding	KNOWN	ESR1	13	10	-0.350089
chr6	151813276	151814179	151813727	ENSG00000233823.1	-	antisense	KNOWN	RP3-443C4.2	1	2	-0.447883
chr6	152121684	152637801	152379742	ENSG00000131018.22	-	protein_coding	KNOWN	SYNE1	40	148	-0.129471
chr6	152380546	152381564	152381055	ENSG00000234577.1	+	antisense	KNOWN	SYNE1-AS1	1	2	0.412127
chr6	152402398	152404966	152403682	ENSG00000226193.1	+	antisense	KNOWN	RP3-398G3.5	1	2	-0.133183
chr6	152410275	152410394	152410334	ENSG00000202044.1	+	rRNA	KNOWN	RNA5SP223	1	1	-0.179035
chr6	152545930	152546984	152546457	ENSG00000233464.2	+	antisense	KNOWN	NANOGP11	1	2	-0.331608
chr6	152697895	152724567	152711231	ENSG00000120279.6	+	protein_coding	KNOWN	MYCT1	3	3	-0.196364
chr6	152705735	152706128	152705931	ENSG00000218792.2	+	processed_pseudogene	KNOWN	HSPD1P16	1	1	-0.107042
chr6	152750798	152759765	152755281	ENSG00000146469.12	+	protein_coding	KNOWN	VIP	3	7	-0.580967
chr6	152794496	152831913	152813204	ENSG00000224893.5	-	lincRNA	KNOWN	RP1-200K18.1	2	3	-0.655286
chr6	152856666	152856744	152856705	ENSG00000266595.1	-	miRNA	NOVEL	AL133269.1	1	1	-0.383346
chr6	152898047	152899280	152898663	ENSG00000217372.2	+	processed_pseudogene	KNOWN	TUBB4BP7	1	1	-0.312629
chr6	152959359	152959605	152959482	ENSG00000220745.2	-	processed_pseudogene	KNOWN	RP1-101K10.4	1	1	-0.220891
chr6	152970519	152983579	152977049	ENSG00000112029.9	-	protein_coding	KNOWN	FBXO5	3	5	-0.273141
chr6	152983750	152989223	152986486	ENSG00000227627.1	+	antisense	KNOWN	RP1-101K10.6	1	3	-0.273141
chr6	152987362	153002685	152995023	ENSG00000112031.15	-	protein_coding	KNOWN	MTRF1L	11	7	-0.136674
chr6	153004459	153131249	153067854	ENSG00000091844.7	-	protein_coding	KNOWN	RGS17	2	5	-0.424563
chr6	153052462	153052544	153052503	ENSG00000212101.1	+	miRNA	NOVEL	AL080276.1	1	1	-0.713192
chr6	153159220	153159345	153159282	ENSG00000201939.1	-	rRNA	KNOWN	RNA5SP224	1	1	-0.382327
chr6	153223991	153224124	153224057	ENSG00000281411.1	-	miRNA	NOVEL	AL121967.1	1	1	-0.829153
chr6	153231320	153347488	153289404	ENSG00000213121.2	+	lincRNA	KNOWN	RP11-306O13.1	1	3	-0.549815
chr6	153282287	153282733	153282510	ENSG00000218426.5	-	processed_pseudogene	KNOWN	RP11-475C16.1	1	1	-0.484509
chr6	153304595	153308982	153306788	ENSG00000237312.1	-	lincRNA	KNOWN	RP11-475C16.2	1	3	-0.579385
chr6	153344113	153344215	153344164	ENSG00000264321.1	+	miRNA	NOVEL	AL358134.1	1	1	-0.497006
chr6	153419021	153419090	153419055	ENSG00000281329.1	-	miRNA	NOVEL	AL358134.2	1	1	-0.900146
chr6	153420438	153420572	153420505	ENSG00000222806.1	+	rRNA	KNOWN	RNA5SP225	1	1	-0.900146
chr6	153665707	153666390	153666048	ENSG00000217160.2	+	processed_pseudogene	KNOWN	RP11-331O9.1	1	1	-0.809828
chr6	153666466	153666666	153666566	ENSG00000242246.2	+	processed_pseudogene	KNOWN	RP11-331O9.2	1	1	-0.809828
chr6	153666627	153667318	153666972	ENSG00000218776.4	+	processed_pseudogene	KNOWN	RP11-331O9.3	1	1	-0.809828
chr6	153667318	153668106	153667712	ENSG00000217044.1	+	processed_pseudogene	KNOWN	RP11-331O9.4	1	1	-0.809828
chr6	153668177	153668362	153668269	ENSG00000220733.1	+	processed_pseudogene	KNOWN	RP11-331O9.5	1	1	-0.809828
chr6	153668589	153668858	153668723	ENSG00000220514.1	+	processed_pseudogene	KNOWN	MTND4LP20	1	1	-0.809828
chr6	153668879	153669901	153669390	ENSG00000216713.1	+	processed_pseudogene	KNOWN	MTND4P13	1	1	-0.809828
chr6	153681447	153681553	153681500	ENSG00000199246.1	+	snRNA	KNOWN	RNU6-896P	1	1	-0.799755
chr6	153938433	153938992	153938712	ENSG00000217085.2	-	processed_pseudogene	KNOWN	HMGB3P19	1	1	-0.270578
chr6	154010496	154246867	154128681	ENSG00000112038.17	+	protein_coding	KNOWN	OPRM1	23	6	-0.468696
chr6	154154496	154356792	154255644	ENSG00000074706.13	-	protein_coding	KNOWN	IPCEF1	13	13	-0.432540
chr6	154159828	154510659	154335243	ENSG00000153721.17	-	protein_coding	KNOWN	CNKSR3	6	22	-0.257059
chr6	154216931	154217489	154217210	ENSG00000237593.1	+	processed_pseudogene	KNOWN	RP11-317B3.2	1	1	-0.499728
chr6	154503980	154504072	154504026	ENSG00000277810.1	+	miRNA	NOVEL	AL357075.1	1	1	-0.179310
chr6	154542552	154542740	154542646	ENSG00000275419.1	+	processed_pseudogene	KNOWN	RP11-486M3.3	1	1	-0.458205
chr6	154549517	154550242	154549879	ENSG00000220181.1	+	processed_pseudogene	KNOWN	RP11-486M3.2	1	1	-0.305002
chr6	154576309	154577079	154576694	ENSG00000219146.1	+	processed_pseudogene	KNOWN	RPS4XP8	1	1	-0.099489
chr6	154605616	154605954	154605785	ENSG00000231316.1	-	processed_pseudogene	KNOWN	RP11-134L4.2	1	1	-0.484933
chr6	154706643	154707795	154707219	ENSG00000205625.2	+	processed_pseudogene	KNOWN	RP11-15G8.1	1	1	0.055466
chr6	154733325	154834244	154783784	ENSG00000213079.9	+	protein_coding	KNOWN	SCAF8	6	22	-0.086411
chr6	154825176	154825279	154825227	ENSG00000200594.1	-	snRNA	KNOWN	RNU6-824P	1	1	-0.437558
chr6	154832697	155257723	155045210	ENSG00000146426.17	+	protein_coding	KNOWN	TIAM2	21	29	0.167210
chr6	154845074	154845620	154845347	ENSG00000218757.1	-	processed_pseudogene	KNOWN	RP3-472M2.2	1	1	-0.130401
chr6	154853360	154853436	154853398	ENSG00000264814.1	+	miRNA	KNOWN	MIR1273C	1	1	-0.262541
chr6	154881282	154881370	154881326	ENSG00000223286.1	+	miRNA	NOVEL	AL121952.1	1	1	-0.077933
chr6	154905076	154905206	154905141	ENSG00000238963.2	-	snoRNA	NOVEL	U8	1	1	0.170418
chr6	155004835	155005318	155005076	ENSG00000274451.1	-	unprocessed_pseudogene	KNOWN	RP1-66H9.1	1	3	0.147640
chr6	155253139	155256724	155254931	ENSG00000235381.1	-	antisense	KNOWN	RP11-477D19.2	1	2	0.144188
chr6	155257509	155314493	155286001	ENSG00000029639.10	-	protein_coding	KNOWN	TFB1M	9	7	-0.081210
chr6	155264013	155276548	155270280	ENSG00000171217.5	+	protein_coding	KNOWN	CLDN20	1	2	-0.012854
chr6	155380511	155381183	155380847	ENSG00000232529.1	-	lincRNA	KNOWN	RP1-257I9.2	1	2	-0.252920
chr6	155395370	155455903	155425636	ENSG00000074771.3	-	protein_coding	KNOWN	NOX3	1	14	-0.148711
chr6	155654963	155655026	155654994	ENSG00000238789.1	-	snRNA	KNOWN	RNU7-152P	1	1	-0.371955
chr6	155946797	155946879	155946838	ENSG00000221456.1	+	miRNA	KNOWN	MIR1202	1	1	-0.635636
chr6	156378750	156378824	156378787	ENSG00000212295.1	+	snoRNA	NOVEL	SNORD28	1	1	-0.359704
chr6	156493226	156499771	156496498	ENSG00000227360.1	-	lincRNA	KNOWN	RP11-518I13.1	2	3	-0.196578
chr6	156662050	156662437	156662243	ENSG00000220347.1	+	processed_pseudogene	KNOWN	RP11-230C9.1	1	1	-0.215792
chr6	156774217	156774662	156774439	ENSG00000271265.1	-	lincRNA	KNOWN	RP11-230C9.4	1	1	-0.148271
chr6	156776360	156778422	156777391	ENSG00000271551.2	-	antisense	KNOWN	RP11-230C9.2	1	2	-0.148271
chr6	156777374	157210779	156994076	ENSG00000049618.21	+	protein_coding	KNOWN	ARID1B	9	20	-0.119706
chr6	156779678	156779731	156779704	ENSG00000271899.1	-	miRNA	KNOWN	MIR4466	1	1	-0.148271
chr6	156780327	156780455	156780391	ENSG00000270487.1	-	antisense	KNOWN	RP11-230C9.3	1	1	-0.148271
chr6	156976294	156977072	156976683	ENSG00000218596.2	+	processed_pseudogene	KNOWN	RP11-2J18.1	1	2	0.083677
chr6	157107727	157119706	157113716	ENSG00000233044.1	-	antisense	KNOWN	RP1-137K2.2	1	2	0.021243
chr6	157289386	157323601	157306493	ENSG00000215712.10	-	protein_coding	KNOWN	TMEM242	2	4	0.343316
chr6	157299045	157300126	157299585	ENSG00000217783.2	-	processed_pseudogene	KNOWN	LDHAL6FP	1	1	0.173522
chr6	157323964	157324477	157324220	ENSG00000271040.1	+	lincRNA	KNOWN	RP5-933K21.3	1	1	0.599371
chr6	157365990	157366923	157366456	ENSG00000213078.3	-	processed_pseudogene	KNOWN	RP5-933K21.2	1	1	0.074714
chr6	157372556	157373171	157372863	ENSG00000218631.1	-	processed_pseudogene	KNOWN	RP3-395C13.1	1	1	-0.202456
chr6	157381133	157678146	157529639	ENSG00000175048.16	+	protein_coding	KNOWN	ZDHHC14	9	9	0.161096
chr6	157529132	157529200	157529166	ENSG00000266617.1	+	miRNA	KNOWN	MIR3692	1	1	0.406865
chr6	157700387	157945077	157822732	ENSG00000130340.14	+	protein_coding	KNOWN	SNX9	4	18	0.219427
chr6	157829143	157830573	157829858	ENSG00000234361.1	-	antisense	KNOWN	RP11-52J3.3	1	2	0.037289
chr6	157872571	157875210	157873890	ENSG00000229502.5	-	antisense	KNOWN	RP11-52J3.2	2	3	0.107846
chr6	157885114	157892786	157888950	ENSG00000236324.1	-	antisense	KNOWN	RP3-403L10.3	1	2	0.153324
chr6	157924402	157924676	157924539	ENSG00000220867.1	+	processed_pseudogene	KNOWN	HSPE1P26	1	1	0.250690
chr6	157934168	157934257	157934212	ENSG00000252658.1	+	snRNA	KNOWN	RNU6-786P	1	1	0.272564
chr6	157981887	158099176	158040531	ENSG00000078269.13	+	protein_coding	KNOWN	SYNJ2	6	27	0.605756
chr6	158001107	158002383	158001745	ENSG00000233496.1	+	sense_intronic	KNOWN	SYNJ2-IT1	1	3	0.473671
chr6	158109515	158168270	158138892	ENSG00000122335.13	-	protein_coding	KNOWN	SERAC1	7	18	0.169983
chr6	158168352	158199344	158183848	ENSG00000272047.1	+	protein_coding	KNOWN	GTF2H5	1	3	0.079042
chr6	158232236	158511828	158372032	ENSG00000130338.12	+	protein_coding	KNOWN	TULP4	7	14	0.168442
chr6	158237336	158242797	158240066	ENSG00000188451.8	-	processed_pseudogene	KNOWN	SRP72P2	1	2	0.198907
chr6	158282841	158428379	158355610	ENSG00000274023.1	+	sense_overlapping	KNOWN	RP11-732M18.4	1	2	0.083688
chr6	158397885	158398561	158398223	ENSG00000238019.1	-	antisense	KNOWN	RP11-732M18.2	1	2	0.005008
chr6	158437797	158438088	158437942	ENSG00000243373.3	+	misc_RNA	KNOWN	RN7SL173P	1	1	0.285633
chr6	158515605	158516229	158515917	ENSG00000219188.1	-	processed_pseudogene	KNOWN	CACYBPP3	1	1	0.497811
chr6	158536436	158635428	158585932	ENSG00000146433.8	+	protein_coding	KNOWN	TMEM181	1	17	0.314356
chr6	158609706	158621636	158615671	ENSG00000218226.1	-	processed_pseudogene	KNOWN	TATDN2P2	1	2	0.356005
chr6	158609707	158609790	158609748	ENSG00000278571.1	+	miRNA	KNOWN	MIR7161	1	1	0.077419
chr6	158636474	158644739	158640606	ENSG00000146425.10	-	protein_coding	KNOWN	DYNLT1	3	5	0.296923
chr6	158650014	158764876	158707445	ENSG00000164674.15	+	protein_coding	KNOWN	SYTL3	5	19	0.372554
chr6	158725747	158726803	158726275	ENSG00000219249.2	-	processed_pseudogene	KNOWN	AMZ2P2	1	1	0.400745
chr6	158764661	158764753	158764707	ENSG00000265558.1	-	miRNA	KNOWN	MIR3918	1	1	0.468434
chr6	158765741	158819412	158792576	ENSG00000092820.17	-	protein_coding	KNOWN	EZR	4	14	0.324676
chr6	158818011	158820593	158819302	ENSG00000233893.1	+	antisense	KNOWN	EZR-AS1	1	2	0.433911
chr6	158839528	158839618	158839573	ENSG00000277772.1	-	miRNA	NOVEL	AL589931.1	1	1	0.236382
chr6	158841117	158857632	158849374	ENSG00000243775.2	-	transcribed_processed_pseudogene	KNOWN	OSTCP1	2	3	0.332203
chr6	158869939	158910353	158890146	ENSG00000203711.11	+	lincRNA	KNOWN	C6orf99	4	4	0.249922
chr6	158921271	158922150	158921710	ENSG00000213076.3	-	processed_pseudogene	KNOWN	yR211F11.2	1	2	0.149136
chr6	158926466	158926571	158926518	ENSG00000223191.1	-	snRNA	KNOWN	RNU6-293P	1	1	0.149136
chr6	158972871	159000187	158986529	ENSG00000130363.11	-	protein_coding	KNOWN	RSPH3	4	8	-0.109306
chr6	158988178	159064925	159026551	ENSG00000271913.5	+	antisense	KNOWN	RP1-111C20.4	4	5	-0.116493
chr6	159034468	159045152	159039810	ENSG00000164691.16	-	protein_coding	KNOWN	TAGAP	3	10	-0.289643
chr6	159064728	159065273	159065000	ENSG00000226032.1	-	lincRNA	KNOWN	RP1-111C20.3	1	2	-0.016649
chr6	159107791	159116053	159111922	ENSG00000224478.1	+	lincRNA	KNOWN	RP11-13P5.1	1	4	0.286476
chr6	159165899	159170007	159167953	ENSG00000233682.3	-	antisense	KNOWN	RP11-13P5.2	2	3	-0.086968
chr6	159169397	159272109	159220753	ENSG00000164694.16	+	protein_coding	KNOWN	FNDC1	3	23	-0.046415
chr6	159240786	159243329	159242057	ENSG00000235086.1	+	sense_intronic	KNOWN	FNDC1-IT1	1	2	-0.394790
chr6	159353922	159354673	159354297	ENSG00000231178.1	-	lincRNA	KNOWN	RP11-125D12.1	1	2	-0.584763
chr6	159383531	159396443	159389987	ENSG00000234777.1	+	lincRNA	KNOWN	RP11-125D12.2	1	3	-0.066435
chr6	159526062	159526527	159526294	ENSG00000216480.2	-	processed_pseudogene	KNOWN	RP3-393E18.1	1	1	-0.247495
chr6	159555964	159556174	159556069	ENSG00000276413.1	+	processed_pseudogene	KNOWN	RP3-393E18.3	1	1	-0.184526
chr6	159586955	159589169	159588062	ENSG00000237927.1	-	lincRNA	KNOWN	RP3-393E18.2	1	2	-0.297714
chr6	159669057	159762529	159715793	ENSG00000112096.16	-	protein_coding	KNOWN	SOD2	16	8	0.015855
chr6	159712801	159713985	159713393	ENSG00000220305.1	-	processed_pseudogene	KNOWN	HNRNPH1P1	1	1	0.210636
chr6	159720415	159720540	159720477	ENSG00000251988.1	-	snRNA	KNOWN	RNU4ATAC18P	1	1	0.210636
chr6	159725585	159756319	159740952	ENSG00000146457.14	+	protein_coding	KNOWN	WTAP	7	8	-0.017920
chr6	159760328	159779055	159769691	ENSG00000120437.8	+	protein_coding	KNOWN	ACAT2	3	9	0.133793
chr6	159778498	159789749	159784123	ENSG00000120438.11	-	protein_coding	KNOWN	TCP1	18	12	0.233464
chr6	159780250	159780381	159780315	ENSG00000207392.1	-	snoRNA	KNOWN	SNORA20	1	1	0.233464
chr6	159785594	159785733	159785663	ENSG00000206910.1	-	snoRNA	KNOWN	SNORA29	1	1	0.233464
chr6	159789812	159798436	159794124	ENSG00000112110.9	+	protein_coding	KNOWN	MRPL18	4	4	0.167045
chr6	159800249	159820704	159810476	ENSG00000146453.12	+	protein_coding	KNOWN	PNLDC1	7	19	0.154958
chr6	159899186	159902510	159900848	ENSG00000236823.1	+	lincRNA	KNOWN	RP1-249F5.3	1	2	0.108480
chr6	159906690	159916530	159911610	ENSG00000130368.5	+	protein_coding	KNOWN	MAS1	1	1	0.047128
chr6	159969099	160113507	160041303	ENSG00000197081.12	+	protein_coding	KNOWN	IGF2R	5	48	0.268014
chr6	160003291	160007664	160005477	ENSG00000268257.2	-	antisense	KNOWN	AIRN	2	3	0.395238
chr6	160093082	160096212	160094647	ENSG00000213073.4	+	transcribed_processed_pseudogene	KNOWN	RP11-288H12.3	2	1	0.269779
chr6	160121789	160158718	160140253	ENSG00000175003.12	+	protein_coding	KNOWN	SLC22A1	7	11	0.132562
chr6	160163539	160163755	160163647	ENSG00000216516.1	-	processed_pseudogene	KNOWN	RP11-317M22.1	1	1	-0.251963
chr6	160171061	160277638	160224349	ENSG00000112499.12	-	protein_coding	KNOWN	SLC22A2	6	11	-0.284400
chr6	160272617	160276130	160274373	ENSG00000230234.1	+	lincRNA	KNOWN	RP1-276N6.2	1	2	-0.356766
chr6	160348268	160452581	160400424	ENSG00000146477.5	+	protein_coding	KNOWN	SLC22A3	1	11	-0.222725
chr6	160453428	160511124	160482276	ENSG00000213071.10	-	transcribed_unprocessed_pseudogene	KNOWN	LPAL2	4	17	-0.294576
chr6	160531483	160664259	160597871	ENSG00000198670.11	-	protein_coding	KNOWN	LPA	3	39	-0.293434
chr6	160666228	160676523	160671375	ENSG00000243831.1	-	unprocessed_pseudogene	KNOWN	RP1-81D8.4	1	2	-0.428574
chr6	160698288	160700632	160699460	ENSG00000224477.5	+	lincRNA	KNOWN	RP1-81D8.3	2	2	-0.407110
chr6	160702238	160753315	160727776	ENSG00000122194.18	+	protein_coding	KNOWN	PLG	12	19	-0.416108
chr6	160755398	160757518	160756458	ENSG00000276960.1	-	unprocessed_pseudogene	KNOWN	RP1-81D8.5	1	2	-0.542137
chr6	160773988	160783214	160778601	ENSG00000274903.1	+	unprocessed_pseudogene	KNOWN	RP1-81D8.6	1	2	-0.233584
chr6	160872888	160918649	160895768	ENSG00000224371.5	-	lincRNA	KNOWN	RP11-235G24.1	4	4	-0.474027
chr6	160905770	160913638	160909704	ENSG00000220913.1	+	unprocessed_pseudogene	KNOWN	RP11-235G24.2	1	3	-0.543973
chr6	160926369	160927162	160926765	ENSG00000233342.1	+	lincRNA	KNOWN	RP11-235G24.3	1	2	-0.417796
chr6	160931080	160969771	160950425	ENSG00000231863.1	+	antisense	KNOWN	RP3-428L16.1	1	4	-0.072212
chr6	160990318	160992342	160991330	ENSG00000272841.1	-	antisense	KNOWN	RP3-428L16.2	1	1	-0.186473
chr6	160991727	161117385	161054556	ENSG00000085511.19	+	protein_coding	KNOWN	MAP3K4	16	28	-0.113121
chr6	161129979	161274061	161202020	ENSG00000026652.13	-	protein_coding	KNOWN	AGPAT4	5	9	0.077163
chr6	161160105	161161982	161161043	ENSG00000279355.1	-	TEC	KNOWN	AGPAT4-IT1	1	1	0.261917
chr6	161347420	162727771	162037595	ENSG00000185345.18	-	protein_coding	KNOWN	PARK2	11	13	-0.378214
chr6	161615066	161615159	161615112	ENSG00000221021.1	+	miRNA	NOVEL	AL035697.1	1	1	-0.510937
chr6	162500242	162500335	162500288	ENSG00000280685.1	-	miRNA	NOVEL	AP000887.1	1	1	-0.314825
chr6	162568379	162569728	162569053	ENSG00000227913.1	+	processed_pseudogene	KNOWN	KRT8P44	1	1	-0.331038
chr6	162727132	163315492	163021312	ENSG00000112530.11	+	protein_coding	KNOWN	PACRG	11	7	-0.389441
chr6	162957258	162957548	162957403	ENSG00000217557.1	-	processed_pseudogene	KNOWN	RP11-157L10.1	1	1	-0.794351
chr6	163042557	163054161	163048359	ENSG00000225437.5	-	antisense	KNOWN	PACRG-AS2	3	4	-0.327535
chr6	163165414	163192002	163178708	ENSG00000225683.5	-	antisense	KNOWN	PACRG-AS3	6	5	-0.206771
chr6	163309985	163324530	163317257	ENSG00000281692.1	-	antisense	KNOWN	PACRG-AS1	1	6	-0.149011
chr6	163363210	163363463	163363336	ENSG00000217514.1	+	processed_pseudogene	KNOWN	RP3-495O10.1	1	1	-0.056872
chr6	163413065	163413960	163413512	ENSG00000270419.1	-	lincRNA	KNOWN	CAHM	1	1	-0.149826
chr6	163414000	163578596	163496298	ENSG00000112531.16	+	protein_coding	KNOWN	QKI	17	8	-0.241893
chr6	163586583	163588165	163587374	ENSG00000228692.2	-	lincRNA	KNOWN	RP5-826L7.1	1	2	-0.232280
chr6	163703904	163759841	163731872	ENSG00000235538.1	+	lincRNA	KNOWN	RP1-230L10.1	1	2	0.070597
chr6	163840561	163840852	163840706	ENSG00000266128.2	+	misc_RNA	KNOWN	RN7SL366P	1	1	-0.116116
chr6	164084023	164085661	164084842	ENSG00000260422.1	-	lincRNA	KNOWN	RP1-155D22.2	1	1	-0.605647
chr6	164108620	164109694	164109157	ENSG00000230627.1	-	lincRNA	KNOWN	RP1-155D22.1	1	2	-0.548680
chr6	164346489	164348644	164347566	ENSG00000226739.1	-	lincRNA	KNOWN	RP11-347L18.1	1	2	-0.839621
chr6	164539114	164539220	164539167	ENSG00000278612.1	-	miRNA	NOVEL	AL513023.1	1	1	-0.530773
chr6	164827750	164831630	164829690	ENSG00000227455.2	+	lincRNA	KNOWN	RP11-300M24.1	2	2	-0.496600
chr6	165117195	165117524	165117359	ENSG00000217878.2	-	processed_pseudogene	KNOWN	RP11-534P19.1	1	1	-0.421480
chr6	165279664	165309607	165294635	ENSG00000112539.14	-	protein_coding	KNOWN	C6orf118	3	9	-0.496351
chr6	165327287	165986603	165656945	ENSG00000112541.13	-	protein_coding	KNOWN	PDE10A	5	23	-0.329258
chr6	165409562	165409676	165409619	ENSG00000199523.1	+	rRNA	KNOWN	RNA5SP226	1	1	-0.548221
chr6	165718235	165718338	165718286	ENSG00000206681.1	-	snRNA	KNOWN	RNU6-730P	1	1	-0.017831
chr6	165754189	165775780	165764984	ENSG00000236627.1	+	antisense	KNOWN	RP11-252P19.1	1	2	-0.480252
chr6	165773201	165775186	165774193	ENSG00000223942.1	-	sense_intronic	KNOWN	RP11-252P19.2	1	2	-0.325735
chr6	165908802	165988048	165948425	ENSG00000223414.2	-	lincRNA	KNOWN	LINC00473	5	4	-0.133894
chr6	165987551	165989615	165988583	ENSG00000281832.1	+	lincRNA	KNOWN	LINC00602	1	1	-0.178778
chr6	166064291	166065300	166064795	ENSG00000216624.2	+	processed_pseudogene	KNOWN	GAPDHP72	1	1	-0.325620
chr6	166099665	166113273	166106469	ENSG00000231297.3	+	lincRNA	KNOWN	RP11-459F1.2	1	3	-0.411842
chr6	166099853	166099924	166099888	ENSG00000276643.1	+	snoRNA	NOVEL	SNORD45	1	1	-0.443675
chr6	166157656	166168700	166163178	ENSG00000164458.9	-	protein_coding	KNOWN	T	4	9	-0.412481
chr6	166209403	166209506	166209454	ENSG00000201292.1	+	snRNA	KNOWN	RNU6-153P	1	1	-0.325566
chr6	166229334	166229554	166229444	ENSG00000280991.1	+	unprocessed_pseudogene	KNOWN	RP4-655C5.7	1	1	-0.255230
chr6	166236969	166256947	166246958	ENSG00000233365.2	+	lincRNA	KNOWN	RP4-655C5.4	1	5	-0.119311
chr6	166240290	166240493	166240391	ENSG00000213536.2	-	processed_pseudogene	KNOWN	GNG5P1	1	1	-0.121522
chr6	166275462	166277077	166276269	ENSG00000280850.1	-	lincRNA	KNOWN	RP4-655C5.9	1	2	-0.091454
chr6	166305300	166308448	166306874	ENSG00000176381.5	-	protein_coding	KNOWN	PRR18	2	2	-0.107042
chr6	166319728	166342591	166331159	ENSG00000198818.9	-	protein_coding	KNOWN	SFT2D1	6	9	0.078894
chr6	166334568	166335471	166335019	ENSG00000233231.1	+	processed_pseudogene	KNOWN	HNRNPA1P49	1	1	-0.105948
chr6	166364919	166383013	166373966	ENSG00000060762.18	-	protein_coding	KNOWN	MPC1	7	6	-0.206076
chr6	166383189	166384824	166384006	ENSG00000261420.1	+	antisense	KNOWN	RP1-168L15.5	1	1	-0.253783
chr6	166388136	166389920	166389028	ENSG00000280057.1	+	TEC	KNOWN	RP1-168L15.6	1	1	-0.253783
chr6	166409364	166906451	166657907	ENSG00000071242.11	-	protein_coding	KNOWN	RPS6KA2	13	23	0.055437
chr6	166460663	166465383	166463023	ENSG00000232082.1	-	sense_intronic	KNOWN	RPS6KA2-IT1	1	4	0.054321
chr6	166509354	166509433	166509393	ENSG00000222958.1	-	miRNA	KNOWN	MIR1913	1	1	0.378613
chr6	166586124	166586477	166586300	ENSG00000235272.1	-	processed_pseudogene	KNOWN	FAM103A2P	1	1	0.215727
chr6	166701094	166702839	166701966	ENSG00000235008.1	-	processed_pseudogene	KNOWN	RP3-497J21.1	1	1	-0.158180
chr6	166858094	166956124	166907109	ENSG00000249141.1	-	protein_coding	KNOWN	RP11-514O12.4	1	8	-0.007469
chr6	166903698	166904835	166904266	ENSG00000231654.1	+	antisense	KNOWN	RPS6KA2-AS1	1	2	-0.280485
chr6	166929504	166957191	166943347	ENSG00000026297.15	-	protein_coding	KNOWN	RNASET2	14	14	0.202540
chr6	166969626	166999065	166984345	ENSG00000227598.1	-	antisense	KNOWN	RP1-167A14.2	1	3	-0.107121
chr6	166997807	166997912	166997859	ENSG00000265828.1	-	miRNA	KNOWN	MIR3939	1	1	0.107589
chr6	166999182	167052713	167025947	ENSG00000213066.11	+	protein_coding	KNOWN	FGFR1OP	7	13	-0.013132
chr6	166999405	167139141	167069273	ENSG00000272980.3	+	processed_transcript	KNOWN	RP11-517H2.6	1	13	-0.050642
chr6	167111807	167139696	167125751	ENSG00000112486.14	+	protein_coding	KNOWN	CCR6	3	4	0.030651
chr6	167146414	167196913	167171663	ENSG00000166984.11	+	protein_coding	KNOWN	TCP10L2	7	9	-0.030429
chr6	167156271	167158329	167157300	ENSG00000120436.3	-	protein_coding	KNOWN	GPR31	1	1	0.064770
chr6	167208631	167208897	167208764	ENSG00000216966.1	-	processed_pseudogene	KNOWN	RP11-568A7.1	1	1	-0.119883
chr6	167228300	167237511	167232905	ENSG00000280707.2	+	lincRNA	KNOWN	RP11-568A7.4	3	4	0.000092
chr6	167237508	167240480	167238994	ENSG00000231720.1	-	lincRNA	KNOWN	RP11-568A7.3	1	2	-0.038510
chr6	167241891	167245916	167243903	ENSG00000228648.1	+	lincRNA	KNOWN	RP11-568A7.2	1	2	-0.038510
chr6	167271169	167316019	167293594	ENSG00000112494.9	+	protein_coding	KNOWN	UNC93A	5	8	-0.048807
chr6	167325086	167359503	167342294	ENSG00000120440.13	+	protein_coding	KNOWN	TTLL2	3	6	-0.073299
chr6	167347472	167348053	167347762	ENSG00000217447.1	+	processed_pseudogene	KNOWN	RP3-366N23.4	1	1	-0.033539
chr6	167357031	167384510	167370770	ENSG00000203690.11	-	protein_coding	KNOWN	TCP10	10	9	-0.164444
chr6	167666840	167679270	167673055	ENSG00000272549.1	-	lincRNA	KNOWN	RP11-351J23.2	1	3	0.152266
chr6	167679626	167683787	167681706	ENSG00000203688.4	-	lincRNA	KNOWN	RP11-351J23.1	1	4	0.197235
chr6	167767083	167768568	167767825	ENSG00000213065.2	-	processed_pseudogene	KNOWN	RP3-431P23.2	1	1	-0.056107
chr6	167784537	167796859	167790698	ENSG00000146521.9	-	lincRNA	KNOWN	LINC01558	2	4	-0.071088
chr6	167795530	167798248	167796889	ENSG00000269155.2	+	lincRNA	KNOWN	RP3-431P23.5	1	1	-0.075953
chr6	167823876	167826709	167825292	ENSG00000198221.8	-	lincRNA	KNOWN	MLLT4-AS1	3	3	-0.303146
chr6	167826922	167972023	167899472	ENSG00000130396.20	+	protein_coding	KNOWN	MLLT4	22	34	-0.210662
chr6	167975924	167979776	167977850	ENSG00000235994.4	-	lincRNA	KNOWN	RP3-470B24.5	2	3	-0.111939
chr6	167992822	167997077	167994949	ENSG00000229921.6	-	lincRNA	KNOWN	KIF25-AS1	2	4	0.152292
chr6	167996241	168045089	168020665	ENSG00000125337.16	+	protein_coding	KNOWN	KIF25	6	10	0.011863
chr6	168055745	168081557	168068651	ENSG00000153303.16	-	protein_coding	KNOWN	FRMD1	9	16	0.523936
chr6	168194358	168204501	168199429	ENSG00000234768.1	+	lincRNA	KNOWN	RP11-503C24.1	1	2	0.173063
chr6	168225279	168226517	168225898	ENSG00000237987.1	-	lincRNA	KNOWN	RP11-503C24.2	1	2	0.265640
chr6	168229732	168240715	168235223	ENSG00000228361.2	+	lincRNA	KNOWN	RP11-503C24.3	1	3	0.200986
chr6	168242938	168262581	168252759	ENSG00000234647.2	+	lincRNA	KNOWN	RP11-503C24.4	2	5	0.059655
chr6	168286905	168289350	168288127	ENSG00000230711.2	-	processed_pseudogene	KNOWN	CTAGE13P	1	1	0.054711
chr6	168292830	168319754	168306292	ENSG00000164488.11	-	protein_coding	KNOWN	DACT2	4	6	0.155369
chr6	168298069	168302114	168300091	ENSG00000224417.2	-	sense_intronic	KNOWN	RP11-503C24.6	1	2	0.145573
chr6	168374697	168375355	168375026	ENSG00000260771.1	+	lincRNA	KNOWN	RP1-39J2.1	1	1	0.068276
chr6	168441151	168673445	168557298	ENSG00000112562.18	+	protein_coding	KNOWN	SMOC2	6	13	-0.016372
chr6	168716606	168723495	168720050	ENSG00000235815.1	+	lincRNA	KNOWN	RP1-125N5.2	1	3	0.266197
chr6	168820423	168820656	168820539	ENSG00000280665.1	+	TEC	KNOWN	RP11-35J6.1	1	1	-0.463069
chr6	168962610	168964341	168963475	ENSG00000225879.1	-	lincRNA	KNOWN	RP3-495K2.3	1	2	0.115451
chr6	169033381	169034050	169033715	ENSG00000279810.1	+	TEC	KNOWN	RP3-495K2.4	1	1	0.071233
chr6	169034197	169035642	169034919	ENSG00000229720.1	-	lincRNA	KNOWN	RP3-495K2.2	1	2	0.071233
chr6	169067818	169069424	169068621	ENSG00000234519.1	+	lincRNA	KNOWN	RP3-495K2.1	2	2	0.318268
chr6	169158092	169162924	169160508	ENSG00000223485.2	-	lincRNA	KNOWN	LINC01615	3	4	0.543249
chr6	169175304	169182740	169179022	ENSG00000261039.2	-	lincRNA	KNOWN	RP11-417E7.2	1	3	0.586256
chr6	169213254	169239565	169226409	ENSG00000226445.1	+	antisense	KNOWN	XXyac-YX65C7_A.2	1	3	0.782247
chr6	169215780	169254044	169234912	ENSG00000186340.14	-	protein_coding	KNOWN	THBS2	6	23	0.810978
chr6	169286534	169289216	169287875	ENSG00000233085.5	-	lincRNA	KNOWN	XXyac-YX65C7_A.3	2	3	0.868096
chr6	169296471	169297959	169297215	ENSG00000224999.1	-	processed_pseudogene	KNOWN	VTA1P1	1	2	0.020557
chr6	169369998	169388385	169379191	ENSG00000226194.5	-	lincRNA	KNOWN	RP1-137D17.1	2	2	0.284625
chr6	169426420	169427069	169426744	ENSG00000272848.1	-	lincRNA	KNOWN	RP1-137D17.2	1	1	0.269910
chr6	169457212	169702048	169579630	ENSG00000184465.15	-	protein_coding	KNOWN	WDR27	12	26	0.199276
chr6	169697248	169697333	169697290	ENSG00000265654.1	+	miRNA	NOVEL	AL513547.1	1	1	0.084536
chr6	169702190	169704856	169703523	ENSG00000185127.6	+	protein_coding	KNOWN	C6orf120	1	1	0.084536
chr6	169703905	169725566	169714735	ENSG00000130024.14	-	protein_coding	KNOWN	PHF10	6	12	0.109644
chr6	169725091	169725854	169725472	ENSG00000232640.1	-	antisense	KNOWN	RP1-266L20.2	1	3	0.119473
chr6	169725504	169738992	169732248	ENSG00000227704.1	+	antisense	KNOWN	RP1-266L20.4	1	2	0.124054
chr6	169740114	169751587	169745850	ENSG00000184786.5	-	protein_coding	KNOWN	TCTE3	2	4	0.093350
chr6	169751622	169781584	169766603	ENSG00000130023.15	+	protein_coding	KNOWN	ERMARD	16	18	0.048092
chr6	169770413	169772042	169771227	ENSG00000266896.1	+	sense_intronic	KNOWN	RP1-266L20.9	1	1	0.302077
chr6	169788790	169798825	169793807	ENSG00000229214.1	-	lincRNA	KNOWN	LINC00242	1	2	0.304636
chr6	169790321	169802873	169796597	ENSG00000231690.2	+	lincRNA	KNOWN	LINC00574	1	3	0.304986
chr6	169809318	169810102	169809710	ENSG00000236173.1	-	lincRNA	KNOWN	RP1-182D15.2	1	2	0.300283
chr6	170162517	170163027	170162772	ENSG00000232197.1	+	antisense	KNOWN	RP11-302L19.1	1	2	0.197526
chr6	170178681	170179660	170179170	ENSG00000273100.1	+	lincRNA	KNOWN	RP11-302L19.3	1	1	0.401320
chr6	170199769	170200258	170200013	ENSG00000218716.1	+	processed_pseudogene	KNOWN	RPL12P23	1	1	0.049681
chr6	170254334	170262569	170258451	ENSG00000230960.1	-	antisense	KNOWN	RP5-1086L22.1	1	3	0.415881
chr6	170266669	170276762	170271715	ENSG00000271820.1	-	lincRNA	KNOWN	RP5-894D12.5	1	3	0.220700
chr6	170272474	170279887	170276180	ENSG00000227508.6	+	lincRNA	KNOWN	LINC01624	3	2	0.124596
chr6	170282206	170306565	170294385	ENSG00000198719.8	-	protein_coding	KNOWN	DLL1	2	11	0.255962
chr6	170290703	170407065	170348884	ENSG00000112584.13	+	protein_coding	KNOWN	FAM120B	5	11	0.173530
chr6	170297876	170298375	170298125	ENSG00000271234.1	-	lincRNA	KNOWN	RP5-894D12.4	1	1	0.317759
chr6	170330761	170330844	170330802	ENSG00000266245.1	+	miRNA	KNOWN	MIR4644	1	1	-0.038856
chr6	170414139	170419325	170416732	ENSG00000261003.1	+	sense_overlapping	KNOWN	RP1-140C12.2	1	1	0.025188
chr6	170535117	170553341	170544229	ENSG00000008018.8	-	protein_coding	KNOWN	PSMB1	2	6	0.026715
chr6	170554302	170572870	170563586	ENSG00000112592.12	+	protein_coding	KNOWN	TBP	7	9	-0.012232
chr6	170575295	170584692	170579993	ENSG00000071994.10	-	protein_coding	KNOWN	PDCD2	15	7	0.059570
chr6	170639606	170640536	170640071	ENSG00000217874.2	+	unprocessed_pseudogene	KNOWN	OR4F7P	1	1	-0.081157
chr6	170651012	170651338	170651175	ENSG00000273640.1	-	processed_pseudogene	KNOWN	WBP1LP8	1	1	0.257051
chr6	170695313	170696950	170696131	ENSG00000234986.1	+	lincRNA	KNOWN	XX-C2158C12.1	1	3	0.119737
chr6	170725197	170728488	170726842	ENSG00000213863.2	+	lincRNA	KNOWN	XX-C2158C12.2	1	2	0.464293
chr6	170735751	170736545	170736148	ENSG00000230423.1	+	lincRNA	KNOWN	XX-C2158C6.1	1	2	0.169994
chr6	170736173	170737777	170736975	ENSG00000225532.1	-	lincRNA	KNOWN	XX-C2158C6.3	1	3	0.169994
chr6	170745518	170745977	170745747	ENSG00000219814.2	+	processed_pseudogene	KNOWN	RPL23AP47	1	1	0.169994
chr7	12704	27234	19969	ENSG00000283061.1	+	lincRNA	KNOWN	ABC7-481722F1.2	2	2	0.139820
chr7	19018	35489	27253	ENSG00000282572.2	-	processed_transcript	KNOWN	RP11-482G13.1	3	4	0.188387
chr7	37032	37477	37254	ENSG00000273644.1	+	processed_pseudogene	KNOWN	ABC7-481722F1.1	1	1	0.285529
chr7	70972	95683	83327	ENSG00000232325.4	-	lincRNA	KNOWN	AC093627.7	1	3	0.522677
chr7	77038	80418	78728	ENSG00000242611.1	+	lincRNA	KNOWN	AC093627.8	1	2	0.475778
chr7	135853	149466	142659	ENSG00000242474.2	-	lincRNA	KNOWN	AC093627.9	4	4	0.517125
chr7	149597	155465	152531	ENSG00000240859.1	+	lincRNA	KNOWN	AC093627.10	4	3	0.413139
chr7	161765	164972	163368	ENSG00000261795.1	-	lincRNA	KNOWN	RP11-90P13.1	1	1	0.405491
chr7	174920	176013	175466	ENSG00000239715.1	+	lincRNA	KNOWN	AC093627.11	1	3	0.842472
chr7	182935	194180	188557	ENSG00000240093.1	-	antisense	KNOWN	AC093627.12	1	3	0.772161
chr7	192969	260745	226857	ENSG00000177706.8	+	protein_coding	KNOWN	FAM20C	5	10	0.793344
chr7	227554	229557	228555	ENSG00000249852.1	-	TEC	KNOWN	AC145676.2	1	1	0.909877
chr7	290651	290821	290736	ENSG00000248999.1	+	processed_pseudogene	KNOWN	WI2-2373I1.1	1	1	0.909615
chr7	291344	294422	292883	ENSG00000248767.1	+	lincRNA	KNOWN	WI2-2373I1.2	1	2	0.909615
chr7	379359	382712	381035	ENSG00000249574.1	+	lincRNA	KNOWN	AC226118.1	1	3	1.016160
chr7	484107	496118	490112	ENSG00000234471.1	-	lincRNA	KNOWN	AC147651.1	1	3	0.897082
chr7	497258	520296	508777	ENSG00000197461.13	-	protein_coding	KNOWN	PDGFA	6	7	0.981261
chr7	520391	525232	522811	ENSG00000223855.1	+	lincRNA	KNOWN	HRAT92	1	3	1.129747
chr7	549197	727650	638423	ENSG00000188191.14	-	protein_coding	KNOWN	PRKAR1B	12	11	0.765943
chr7	550733	550813	550773	ENSG00000252986.1	+	miRNA	NOVEL	AC147651.2	1	1	0.938079
chr7	561958	565619	563788	ENSG00000229380.1	+	antisense	KNOWN	AC147651.5	1	2	0.938079
chr7	603185	608482	605833	ENSG00000237181.1	+	antisense	KNOWN	AC147651.4	1	2	0.754957
chr7	726701	786475	756588	ENSG00000164818.15	+	protein_coding	KNOWN	DNAAF5	8	13	0.627361
chr7	816615	896435	856525	ENSG00000164828.17	+	protein_coding	KNOWN	SUN1	35	21	0.941779
chr7	876552	896436	886494	ENSG00000239857.6	+	protein_coding	KNOWN	GET4	7	9	0.914597
chr7	879790	886547	883168	ENSG00000273151.1	-	antisense	KNOWN	RP11-449P15.2	1	1	0.892851
chr7	897901	955407	926654	ENSG00000105963.13	-	protein_coding	KNOWN	ADAP1	18	11	1.049288
chr7	898778	975599	937188	ENSG00000240230.5	-	protein_coding	KNOWN	COX19	4	12	1.000082
chr7	983199	989640	986419	ENSG00000073067.13	+	protein_coding	KNOWN	CYP2W1	5	9	0.834291
chr7	996986	1138260	1067623	ENSG00000146540.14	-	protein_coding	KNOWN	C7orf50	8	5	0.947218
chr7	1022935	1023045	1022990	ENSG00000199023.2	-	miRNA	KNOWN	MIR339	1	1	1.053772
chr7	1029025	1043891	1036458	ENSG00000225146.1	+	antisense	KNOWN	AC073957.15	1	2	1.080647
chr7	1044576	1059261	1051918	ENSG00000164849.8	+	protein_coding	KNOWN	GPR146	6	2	0.870026
chr7	1055360	1059261	1057310	ENSG00000257607.1	-	antisense	KNOWN	RP11-449P15.1	1	2	0.745602
chr7	1074450	1078036	1076243	ENSG00000224079.1	+	antisense	KNOWN	AC091729.7	1	3	0.932725
chr7	1080863	1082178	1081520	ENSG00000226291.1	+	antisense	KNOWN	AC091729.8	1	2	0.932725
chr7	1082208	1093815	1088011	ENSG00000164850.14	+	protein_coding	KNOWN	GPER1	7	3	0.889027
chr7	1152071	1160759	1156415	ENSG00000178381.11	-	protein_coding	KNOWN	ZFAND2A	7	6	0.843224
chr7	1160374	1165267	1162820	ENSG00000229043.2	+	antisense	KNOWN	AC091729.9	3	5	0.843224
chr7	1232907	1237318	1235112	ENSG00000164853.8	+	protein_coding	KNOWN	UNCX	1	3	0.995207
chr7	1267353	1269267	1268310	ENSG00000233082.1	+	lincRNA	KNOWN	AC073094.4	1	2	0.922067
chr7	1428465	1459502	1443983	ENSG00000164877.18	-	protein_coding	KNOWN	MICALL2	15	17	1.362176
chr7	1459937	1464008	1461972	ENSG00000225981.1	+	antisense	KNOWN	AC102953.4	1	2	1.472986
chr7	1464497	1467522	1466009	ENSG00000273230.1	-	lincRNA	KNOWN	RP11-1246C19.1	1	1	1.472986
chr7	1470277	1504367	1487322	ENSG00000164880.15	-	protein_coding	KNOWN	INTS1	8	48	1.576693
chr7	1508655	1509427	1509041	ENSG00000231927.1	-	antisense	KNOWN	AC102953.6	1	2	1.551423
chr7	1530714	1543043	1536878	ENSG00000198517.9	+	protein_coding	KNOWN	MAFK	3	4	0.931768
chr7	1542235	1560821	1551528	ENSG00000164855.15	-	protein_coding	KNOWN	TMEM184A	11	9	1.201716
chr7	1567330	1571005	1569167	ENSG00000157778.8	-	protein_coding	KNOWN	PSMG3	3	3	1.343297
chr7	1570073	1589626	1579849	ENSG00000230487.7	+	lincRNA	KNOWN	PSMG3-AS1	7	6	1.205106
chr7	1614590	1615325	1614957	ENSG00000230444.1	+	processed_pseudogene	KNOWN	TFAMP1	1	1	0.664176
chr7	1620654	1621405	1621029	ENSG00000231476.1	+	lincRNA	KNOWN	AC074389.5	1	2	0.664176
chr7	1688119	1747954	1718036	ENSG00000225968.7	+	protein_coding	KNOWN	ELFN1	2	3	0.737656
chr7	1691906	1692450	1692178	ENSG00000234977.1	-	lincRNA	KNOWN	AC074389.7	1	2	0.454562
chr7	1692810	1694325	1693567	ENSG00000205971.2	-	lincRNA	KNOWN	AC074389.6	2	2	0.454562
chr7	1738630	1742291	1740460	ENSG00000236081.1	-	lincRNA	KNOWN	ELFN1-AS1	2	2	0.708988
chr7	1780694	1780791	1780742	ENSG00000266391.1	-	miRNA	NOVEL	AC074389.1	1	1	0.491739
chr7	1815793	2233243	2024518	ENSG00000002822.15	-	protein_coding	KNOWN	MAD1L1	23	19	0.859649
chr7	1838586	1849931	1844258	ENSG00000176349.11	+	antisense	KNOWN	AC110781.3	2	2	0.413920
chr7	1844180	1844253	1844216	ENSG00000265089.1	-	miRNA	KNOWN	MIR4655	1	1	0.413920
chr7	2234231	2242198	2238214	ENSG00000122687.17	-	protein_coding	KNOWN	FTSJ2	5	4	0.948026
chr7	2242222	2251146	2246684	ENSG00000106268.15	+	protein_coding	KNOWN	NUDT1	9	5	0.967119
chr7	2251770	2354318	2303044	ENSG00000106266.8	-	protein_coding	KNOWN	SNX8	9	11	0.812404
chr7	2257515	2257577	2257546	ENSG00000277102.1	-	miRNA	KNOWN	MIR6836	1	1	1.096579
chr7	2287915	2288428	2288171	ENSG00000271098.1	+	processed_pseudogene	KNOWN	IMMP1LP3	1	2	1.022729
chr7	2354086	2380745	2367415	ENSG00000106263.17	+	protein_coding	KNOWN	EIF3B	12	19	0.886644
chr7	2384121	2388597	2386359	ENSG00000230914.2	+	lincRNA	KNOWN	AC004840.8	1	2	1.079355
chr7	2393847	2394131	2393989	ENSG00000271163.1	-	processed_pseudogene	KNOWN	RP4-607J2.1	1	1	0.975739
chr7	2403560	2448483	2426021	ENSG00000136213.9	+	protein_coding	KNOWN	CHST12	4	2	0.830613
chr7	2474844	2476894	2475869	ENSG00000275572.1	-	protein_coding	KNOWN	GRIFIN	2	5	1.179455
chr7	2512529	2529177	2520853	ENSG00000106003.12	+	protein_coding	KNOWN	LFNG	7	9	1.100404
chr7	2527074	2527145	2527109	ENSG00000264357.1	+	miRNA	KNOWN	MIR4648	1	1	1.100404
chr7	2537877	2555727	2546802	ENSG00000106009.15	-	protein_coding	KNOWN	BRAT1	6	14	1.038393
chr7	2558972	2614734	2586853	ENSG00000106012.17	+	protein_coding	KNOWN	IQCE	17	22	0.883348
chr7	2631951	2664802	2648376	ENSG00000136295.14	+	protein_coding	KNOWN	TTYH3	7	14	1.326112
chr7	2679522	2775500	2727511	ENSG00000174945.13	+	protein_coding	KNOWN	AMZ1	6	7	0.810032
chr7	2728112	2844324	2786218	ENSG00000146535.13	-	protein_coding	KNOWN	GNA12	8	5	0.568524
chr7	2835621	2836022	2835821	ENSG00000231357.1	+	processed_pseudogene	KNOWN	AC006028.11	1	1	0.532154
chr7	2906141	3043945	2975043	ENSG00000198286.9	-	protein_coding	KNOWN	CARD11	4	25	0.258635
chr7	2944035	2947091	2945563	ENSG00000237286.1	+	antisense	KNOWN	AC004906.3	1	2	0.551423
chr7	2999094	2999394	2999244	ENSG00000201794.1	+	misc_RNA	KNOWN	RN7SKP130	1	1	0.448423
chr7	3083252	3086421	3084836	ENSG00000228334.1	-	lincRNA	KNOWN	AC024028.1	1	2	0.160887
chr7	3140234	3174654	3157444	ENSG00000217455.8	-	lincRNA	KNOWN	AC091801.1	5	4	0.287112
chr7	3196626	3198256	3197441	ENSG00000231892.1	-	lincRNA	KNOWN	AC073316.2	1	3	-0.112208
chr7	3264032	3302452	3283242	ENSG00000236708.1	-	antisense	KNOWN	AC073316.1	1	2	0.065698
chr7	3301448	4269000	3785224	ENSG00000146555.18	+	protein_coding	KNOWN	SDK1	10	46	-0.045944
chr7	3337889	3338601	3338245	ENSG00000224593.1	+	transcribed_processed_pseudogene	KNOWN	RP11-30B1.1	2	1	-0.370535
chr7	3419067	3419149	3419108	ENSG00000211544.1	+	miRNA	NOVEL	AC069286.1	1	1	-0.073594
chr7	3642815	3643784	3643299	ENSG00000236510.1	-	antisense	KNOWN	AC011284.3	1	2	-0.563018
chr7	3840518	3840590	3840554	ENSG00000274335.1	-	miRNA	NOVEL	AC004984.1	1	1	-0.235894
chr7	4511959	4512033	4511996	ENSG00000261809.1	-	processed_pseudogene	KNOWN	CYP3A54P	1	1	0.107505
chr7	4682309	4771443	4726876	ENSG00000164916.10	+	protein_coding	KNOWN	FOXK1	3	9	0.822717
chr7	4775622	4794312	4784967	ENSG00000242802.6	+	protein_coding	KNOWN	AP5Z1	7	17	0.995509
chr7	4788565	4788639	4788602	ENSG00000264474.1	-	miRNA	KNOWN	MIR4656	1	1	0.976515
chr7	4797055	4883719	4840387	ENSG00000157927.16	-	protein_coding	KNOWN	RADIL	7	15	0.691696
chr7	4811188	4811289	4811238	ENSG00000206895.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.915527
chr7	4857733	4861994	4859863	ENSG00000218823.1	-	protein_coding	KNOWN	PAPOLB	1	1	0.159807
chr7	4865432	4865804	4865618	ENSG00000213935.3	-	processed_pseudogene	KNOWN	AC092610.12	1	1	0.159807
chr7	4905989	4959213	4932601	ENSG00000136297.14	-	protein_coding	KNOWN	MMD2	4	8	0.458996
chr7	4973988	5040675	5007331	ENSG00000196204.11	+	transcribed_unprocessed_pseudogene	KNOWN	RNF216P1	13	8	0.566400
chr7	4983718	5073221	5028469	ENSG00000272968.5	+	protein_coding	KNOWN	RBAK-RBAKDN	2	8	0.532072
chr7	5009164	5009328	5009246	ENSG00000270822.1	-	processed_pseudogene	KNOWN	RP11-730B22.1	1	1	0.598099
chr7	5031608	5037831	5034719	ENSG00000275328.1	-	unprocessed_pseudogene	KNOWN	SPDYE19P	1	6	0.729422
chr7	5045821	5069488	5057654	ENSG00000146587.17	+	protein_coding	KNOWN	RBAK	3	6	0.437338
chr7	5072125	5073223	5072674	ENSG00000273313.1	+	lincRNA	KNOWN	RBAKDN	1	3	0.376088
chr7	5117169	5118087	5117628	ENSG00000272595.1	+	unprocessed_pseudogene	KNOWN	OR10AH1P	1	1	0.496919
chr7	5121239	5144546	5132892	ENSG00000159904.11	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF890P	2	6	0.445115
chr7	5180061	5180162	5180111	ENSG00000202039.1	+	snRNA	KNOWN	RNU6-215P	1	1	0.271100
chr7	5190188	5233826	5212007	ENSG00000157954.14	+	protein_coding	KNOWN	WIPI2	14	13	0.677893
chr7	5274369	5306870	5290619	ENSG00000164638.10	+	protein_coding	KNOWN	SLC29A4	6	11	0.857103
chr7	5276336	5276415	5276375	ENSG00000263808.1	+	miRNA	NOVEL	AC093376.1	1	1	0.686637
chr7	5306790	5425414	5366102	ENSG00000182095.14	-	protein_coding	KNOWN	TNRC18	10	30	1.151389
chr7	5419827	5420767	5420297	ENSG00000241269.1	+	antisense	KNOWN	AC093620.5	1	2	1.183784
chr7	5419846	5423122	5421484	ENSG00000188365.3	+	antisense	KNOWN	AC092171.2	1	2	1.183784
chr7	5425770	5426401	5426085	ENSG00000272953.1	+	lincRNA	KNOWN	RP11-1275H24.2	1	1	1.183784
chr7	5426277	5428927	5427602	ENSG00000234432.4	-	lincRNA	KNOWN	RP11-1275H24.1	1	1	1.183784
chr7	5428731	5429672	5429201	ENSG00000273084.1	+	lincRNA	KNOWN	RP11-1275H24.3	1	1	1.183784
chr7	5431335	5513798	5472566	ENSG00000155034.18	-	protein_coding	KNOWN	FBXL18	5	7	1.147770
chr7	5475804	5479811	5477807	ENSG00000230733.2	+	lincRNA	KNOWN	AC092171.4	1	2	0.965646
chr7	5495819	5495917	5495868	ENSG00000207973.1	-	miRNA	KNOWN	MIR589	1	1	1.325711
chr7	5527151	5563784	5545467	ENSG00000075624.13	-	protein_coding	KNOWN	ACTB	13	7	1.397460
chr7	5528103	5528186	5528144	ENSG00000263900.1	-	miRNA	NOVEL	AC006483.1	1	1	1.206670
chr7	5556731	5557245	5556988	ENSG00000272719.1	+	antisense	KNOWN	CTB-161C1.1	1	1	1.219104
chr7	5560743	5561055	5560899	ENSG00000228974.5	+	processed_pseudogene	KNOWN	AC006483.5	1	1	1.219104
chr7	5592823	5606655	5599739	ENSG00000075618.17	+	protein_coding	KNOWN	FSCN1	5	5	1.190294
chr7	5620047	5781739	5700893	ENSG00000011275.18	-	protein_coding	KNOWN	RNF216	9	17	0.724739
chr7	5662432	5680461	5671446	ENSG00000237738.1	-	sense_intronic	KNOWN	RNF216-IT1	1	3	0.754120
chr7	5823160	5854435	5838797	ENSG00000235944.7	+	transcribed_unprocessed_pseudogene	KNOWN	ZNF815P	5	6	0.723974
chr7	5871753	5872050	5871901	ENSG00000277265.1	-	misc_RNA	KNOWN	RN7SL556P	1	1	0.495991
chr7	5879827	5886362	5883094	ENSG00000122543.10	+	protein_coding	KNOWN	OCM	2	5	0.495991
chr7	5898725	5926550	5912637	ENSG00000122674.11	+	protein_coding	KNOWN	CCZ1	7	15	0.585158
chr7	5925550	5970683	5948116	ENSG00000155026.16	-	protein_coding	KNOWN	RSPH10B	10	21	0.530376
chr7	5973239	6009125	5991182	ENSG00000122512.14	-	protein_coding	KNOWN	PMS2	7	15	0.733671
chr7	6004283	6004385	6004334	ENSG00000201990.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.765181
chr7	6009245	6023834	6016539	ENSG00000106305.9	+	protein_coding	KNOWN	AIMP2	4	5	0.269497
chr7	6016877	6017011	6016944	ENSG00000207217.1	+	snoRNA	NOVEL	SNORA42	1	1	0.242483
chr7	6022244	6059230	6040737	ENSG00000086232.12	-	protein_coding	KNOWN	EIF2AK1	10	15	0.637943
chr7	6031376	6036386	6033881	ENSG00000157999.5	+	protein_coding	KNOWN	ANKRD61	1	3	0.765341
chr7	6047721	6048023	6047872	ENSG00000240718.3	-	misc_RNA	KNOWN	RN7SL851P	1	1	0.765341
chr7	6057500	6057604	6057552	ENSG00000252929.1	+	snRNA	KNOWN	RNU6-218P	1	1	0.694150
chr7	6081103	6093085	6087094	ENSG00000231704.5	+	lincRNA	KNOWN	AC004895.4	3	4	0.561197
chr7	6104884	6161564	6133224	ENSG00000106346.11	+	protein_coding	KNOWN	USP42	7	18	0.410976
chr7	6161776	6272644	6217210	ENSG00000008256.15	-	protein_coding	KNOWN	CYTH3	11	13	0.484574
chr7	6185275	6185360	6185317	ENSG00000278065.1	-	miRNA	NOVEL	AC004895.1	1	1	0.886877
chr7	6212638	6212740	6212689	ENSG00000202273.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.320066
chr7	6329409	6348981	6339195	ENSG00000178397.12	-	protein_coding	KNOWN	FAM220A	6	3	0.404964
chr7	6365441	6365770	6365605	ENSG00000274319.1	+	processed_pseudogene	KNOWN	RPSAP73	1	1	0.787454
chr7	6374523	6403977	6389250	ENSG00000136238.17	+	protein_coding	KNOWN	RAC1	6	7	0.783897
chr7	6409126	6484190	6446658	ENSG00000164535.14	-	protein_coding	KNOWN	DAGLB	10	15	0.692727
chr7	6445953	6484242	6465097	ENSG00000136240.9	-	protein_coding	KNOWN	KDELR2	6	5	0.568631
chr7	6490793	6491098	6490945	ENSG00000231359.3	-	processed_pseudogene	KNOWN	AC072052.7	1	1	0.501104
chr7	6497462	6551436	6524449	ENSG00000215045.8	-	protein_coding	KNOWN	GRID2IP	3	22	0.579614
chr7	6577434	6589374	6583404	ENSG00000136247.14	+	protein_coding	KNOWN	ZDHHC4	12	9	0.562524
chr7	6578565	6588974	6583769	ENSG00000232581.1	-	antisense	KNOWN	AC079742.4	1	2	0.562524
chr7	6590017	6608726	6599371	ENSG00000146576.12	+	protein_coding	KNOWN	C7orf26	6	7	0.447867
chr7	6615617	6624290	6619953	ENSG00000236609.3	+	protein_coding	KNOWN	ZNF853	1	3	0.480445
chr7	6637322	6656432	6646877	ENSG00000205903.6	+	protein_coding	KNOWN	ZNF316	3	9	0.761860
chr7	6663974	6708901	6686437	ENSG00000228010.5	+	antisense	KNOWN	AC073343.13	3	4	0.459138
chr7	6673494	6676366	6674930	ENSG00000198580.7	+	unprocessed_pseudogene	KNOWN	RP11-611L7.2	1	5	0.530113
chr7	6688433	6706923	6697678	ENSG00000164631.18	-	protein_coding	KNOWN	ZNF12	5	6	0.221679
chr7	6691977	6692059	6692018	ENSG00000265245.1	+	miRNA	NOVEL	AC073343.1	1	1	0.193139
chr7	6710128	6753862	6731995	ENSG00000187953.10	+	transcribed_unprocessed_pseudogene	KNOWN	PMS2CL	4	14	0.507886
chr7	6715630	6720982	6718306	ENSG00000277327.1	-	unprocessed_pseudogene	KNOWN	SPDYE20P	1	5	0.492775
chr7	6754109	6799365	6776737	ENSG00000169402.15	+	protein_coding	KNOWN	RSPH10B2	11	21	0.562989
chr7	6794134	6826770	6810452	ENSG00000146574.15	-	protein_coding	KNOWN	CCZ1B	15	15	0.549652
chr7	6835420	6835794	6835607	ENSG00000273252.1	-	unprocessed_pseudogene	KNOWN	OR7E39P	1	1	0.309144
chr7	6855485	6859830	6857657	ENSG00000155070.8	-	processed_pseudogene	KNOWN	UNC93B2	1	3	0.382211
chr7	6866658	6867672	6867165	ENSG00000205897.5	-	unprocessed_pseudogene	KNOWN	OR7E136P	1	1	0.382211
chr7	6878545	6878632	6878588	ENSG00000263457.1	-	miRNA	NOVEL	AC079804.1	1	1	0.382248
chr7	6879627	6880626	6880126	ENSG00000250561.2	-	unprocessed_pseudogene	KNOWN	OR7E59P	1	1	0.382248
chr7	6900424	6900623	6900523	ENSG00000243531.1	-	processed_pseudogene	KNOWN	RP11-740N7.3	1	1	0.266866
chr7	6923804	6930835	6927319	ENSG00000226943.3	+	unprocessed_pseudogene	KNOWN	ALG1L5P	1	8	0.397512
chr7	6924078	6924513	6924295	ENSG00000241539.1	-	processed_pseudogene	KNOWN	RP11-740N7.4	1	1	0.382178
chr7	6931684	6939603	6935643	ENSG00000242731.3	-	unprocessed_pseudogene	KNOWN	FAM86LP	1	6	0.511145
chr7	7066611	7066692	7066651	ENSG00000264679.1	-	miRNA	NOVEL	AC092104.2	1	1	0.108111
chr7	7066964	7067045	7067004	ENSG00000266287.1	-	miRNA	KNOWN	MIR3683	1	1	0.108111
chr7	7067367	7067449	7067408	ENSG00000263504.1	-	miRNA	NOVEL	AC092104.1	1	1	0.108111
chr7	7068044	7068126	7068085	ENSG00000265155.1	-	miRNA	NOVEL	AC092104.3	1	1	0.108111
chr7	7068187	7068269	7068228	ENSG00000266409.1	-	miRNA	NOVEL	AC092104.5	1	1	0.108111
chr7	7068823	7068904	7068863	ENSG00000266121.1	-	miRNA	NOVEL	AC092104.4	1	1	0.108111
chr7	7078302	7079742	7079022	ENSG00000239696.3	-	processed_pseudogene	KNOWN	RP11-397J20.1	1	1	-0.273961
chr7	7102573	7102681	7102627	ENSG00000201218.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.292868
chr7	7156934	7248651	7202792	ENSG00000106392.10	+	protein_coding	KNOWN	C1GALT1	7	4	-0.063655
chr7	7177952	7178324	7178138	ENSG00000244167.1	+	processed_pseudogene	KNOWN	RP4-733B9.1	1	1	-0.370351
chr7	7255154	7277779	7266466	ENSG00000230825.1	+	processed_transcript	KNOWN	AC005532.5	3	4	0.038653
chr7	7293508	7293880	7293694	ENSG00000236712.1	+	processed_pseudogene	KNOWN	AC079448.1	1	1	-0.201739
chr7	7356203	7535853	7446028	ENSG00000215018.9	-	protein_coding	KNOWN	COL28A1	6	35	-0.121004
chr7	7550104	7552440	7551272	ENSG00000272732.1	-	lincRNA	KNOWN	RP5-1159O4.2	1	2	-0.279102
chr7	7552462	7566996	7559729	ENSG00000272894.5	-	lincRNA	KNOWN	RP5-1159O4.1	3	3	-0.279102
chr7	7566872	7608929	7587900	ENSG00000164654.15	+	protein_coding	KNOWN	MIOS	9	13	-0.204424
chr7	7619872	7620543	7620207	ENSG00000272745.1	+	lincRNA	KNOWN	RP5-1007H16.1	1	1	-0.212863
chr7	7636518	7718607	7677562	ENSG00000106399.11	-	protein_coding	KNOWN	RPA3	7	8	-0.201894
chr7	7640711	8004059	7822385	ENSG00000219545.9	+	antisense	KNOWN	UMAD1	7	5	-0.116735
chr7	7735743	7736851	7736297	ENSG00000270314.1	-	processed_pseudogene	KNOWN	GS1-165B14.2	1	1	0.075216
chr7	7738524	7742574	7740549	ENSG00000234718.6	-	lincRNA	KNOWN	AC007161.5	3	3	0.075216
chr7	7742091	7742535	7742313	ENSG00000269721.1	-	transcribed_processed_pseudogene	KNOWN	RPL23AP51	1	1	0.075216
chr7	7906519	7906624	7906571	ENSG00000201747.1	+	snRNA	KNOWN	RNU6-534P	1	1	0.182190
chr7	7909300	7910449	7909874	ENSG00000214998.2	-	processed_pseudogene	KNOWN	CCNB2P1	1	1	-0.028650
chr7	7949853	7950709	7950281	ENSG00000234141.1	-	antisense	KNOWN	AC009473.1	1	2	-0.012154
chr7	7958183	7969903	7964043	ENSG00000233108.1	-	antisense	KNOWN	AC006042.7	1	2	-0.041034
chr7	7968794	8094272	8031533	ENSG00000106415.12	+	protein_coding	KNOWN	GLCCI1	12	8	-0.192956
chr7	7980312	7982228	7981270	ENSG00000233264.2	+	processed_pseudogene	KNOWN	AC006042.8	1	3	-0.082259
chr7	8113184	8262687	8187935	ENSG00000003147.17	-	protein_coding	KNOWN	ICA1	18	15	-0.105709
chr7	8114025	8116561	8115293	ENSG00000227719.1	+	antisense	KNOWN	AC006042.6	1	3	-0.116761
chr7	8154916	8155027	8154971	ENSG00000265212.2	+	miRNA	NOVEL	AC007009.2	1	1	-0.136485
chr7	8262233	8262821	8262527	ENSG00000244239.1	+	antisense	KNOWN	AC007009.1	1	2	-0.084165
chr7	8262264	8344516	8303390	ENSG00000229970.3	+	antisense	KNOWN	AC007128.1	1	7	-0.206558
chr7	8303741	8341343	8322542	ENSG00000272328.1	+	lincRNA	KNOWN	RP4-594A5.1	2	3	-0.054197
chr7	8433955	8752963	8593459	ENSG00000122584.12	+	protein_coding	KNOWN	NXPH1	5	3	-0.493966
chr7	8938787	8939369	8939078	ENSG00000236748.1	+	processed_pseudogene	KNOWN	AC009500.2	1	1	-0.384446
chr7	9082557	9189857	9136207	ENSG00000278254.4	-	lincRNA	KNOWN	RP4-668E10.4	4	4	-0.462744
chr7	9084022	9084175	9084098	ENSG00000271526.1	+	processed_pseudogene	KNOWN	RP4-668E10.2	1	1	-0.703469
chr7	9170948	9171273	9171110	ENSG00000278446.1	-	processed_pseudogene	KNOWN	RP4-668E10.3	1	1	-0.203464
chr7	9594617	9594723	9594670	ENSG00000264766.1	-	miRNA	NOVEL	AC079756.1	1	1	-0.839061
chr7	9614978	9615985	9615481	ENSG00000233876.2	+	processed_pseudogene	KNOWN	GAPDHP68	1	1	-0.407241
chr7	9634270	9635703	9634986	ENSG00000271077.1	+	processed_pseudogene	KNOWN	AC096553.5	1	2	-0.444061
chr7	9726241	9728272	9727256	ENSG00000197320.5	+	processed_pseudogene	KNOWN	AC060834.2	1	1	-0.116116
chr7	9737322	9769513	9753417	ENSG00000234710.1	+	lincRNA	KNOWN	AC060834.3	1	5	-0.318266
chr7	9850924	9851386	9851155	ENSG00000270611.1	+	processed_pseudogene	KNOWN	GS1-69O6.1	1	1	-0.833154
chr7	9961024	9981817	9971420	ENSG00000235431.1	+	lincRNA	KNOWN	AC006373.1	1	3	-0.674234
chr7	10222797	10223011	10222904	ENSG00000212422.2	+	snoRNA	NOVEL	U3	1	1	-0.524680
chr7	10449820	10779944	10614882	ENSG00000283117.1	-	lincRNA	KNOWN	CTD-2060L22.1	1	3	-0.371051
chr7	10451311	10453252	10452281	ENSG00000229091.3	+	processed_pseudogene	KNOWN	HSPA8P8	1	1	-0.075465
chr7	10476581	10476878	10476729	ENSG00000234356.1	+	processed_pseudogene	KNOWN	AC009945.4	1	1	-0.198598
chr7	10702676	10707406	10705041	ENSG00000236414.1	+	lincRNA	KNOWN	AC004535.2	1	2	-0.388440
chr7	10901978	10902074	10902026	ENSG00000201774.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.402773
chr7	10931951	10940256	10936103	ENSG00000189043.9	-	protein_coding	KNOWN	NDUFA4	6	4	-0.269408
chr7	10940423	10940735	10940579	ENSG00000271185.1	+	lincRNA	KNOWN	RP5-855F16.1	1	1	-0.269408
chr7	10973872	11169630	11071751	ENSG00000106443.15	+	protein_coding	KNOWN	PHF14	15	18	-0.319028
chr7	11006399	11006876	11006637	ENSG00000230370.1	-	processed_pseudogene	KNOWN	RPL23AP52	1	1	0.025321
chr7	11180902	11520175	11350538	ENSG00000230333.6	+	processed_transcript	KNOWN	AC004538.3	14	6	-0.405240
chr7	11257681	11258535	11258108	ENSG00000226827.1	-	processed_pseudogene	KNOWN	NPM1P11	1	1	-0.496477
chr7	11370357	11832198	11601277	ENSG00000005108.15	-	protein_coding	KNOWN	THSD7A	5	28	-0.486737
chr7	11406955	11414078	11410516	ENSG00000230435.1	+	antisense	KNOWN	AC004160.4	1	3	-0.251746
chr7	11820317	11821294	11820805	ENSG00000235920.1	-	processed_pseudogene	KNOWN	AC073109.2	1	1	-0.634147
chr7	12211241	12243367	12227304	ENSG00000106460.18	+	protein_coding	KNOWN	TMEM106B	8	9	-0.561685
chr7	12330885	12403941	12367413	ENSG00000146530.11	-	protein_coding	KNOWN	VWDE	6	30	-0.582724
chr7	12439419	12440404	12439911	ENSG00000274970.1	-	processed_pseudogene	KNOWN	RP11-472F21.1	1	1	-0.611391
chr7	12471352	12472545	12471948	ENSG00000236048.2	+	processed_pseudogene	KNOWN	AC013470.6	1	1	-0.625421
chr7	12491095	12492004	12491549	ENSG00000203523.3	+	processed_pseudogene	KNOWN	TAS2R2P	1	1	-0.354073
chr7	12496429	12541910	12519169	ENSG00000226690.6	+	lincRNA	KNOWN	AC005281.1	3	7	-0.291459
chr7	12506007	12507478	12506742	ENSG00000224667.1	+	processed_pseudogene	KNOWN	AC013470.8	1	3	-0.354073
chr7	12570125	12571392	12570758	ENSG00000225606.1	-	antisense	KNOWN	AC005281.2	1	2	-0.006310
chr7	12570577	12660179	12615378	ENSG00000006747.14	+	protein_coding	KNOWN	SCIN	10	16	-0.107977
chr7	12654179	12654985	12654582	ENSG00000229233.1	+	sense_overlapping	KNOWN	CTD-2320J21.2	1	2	0.002355
chr7	12685637	12686033	12685835	ENSG00000271253.1	+	processed_pseudogene	KNOWN	CTD-2320J21.1	1	1	-0.161765
chr7	12686856	12690934	12688895	ENSG00000122644.12	+	protein_coding	KNOWN	ARL4A	6	3	-0.122600
chr7	12700758	12700889	12700823	ENSG00000199470.1	-	snoRNA	NOVEL	SNORA64	1	1	0.009055
chr7	12876684	12876946	12876815	ENSG00000222974.1	+	misc_RNA	KNOWN	RN7SKP228	1	1	-0.188116
chr7	12922545	12922920	12922732	ENSG00000230879.1	-	processed_pseudogene	KNOWN	RBMX2P4	1	1	-0.451370
chr7	13101391	13704149	13402770	ENSG00000229618.1	+	lincRNA	KNOWN	AC011288.2	2	5	-0.505561
chr7	13339201	13365049	13352125	ENSG00000237713.1	-	lincRNA	KNOWN	AC006000.5	1	5	-0.312737
chr7	13854355	13859025	13856690	ENSG00000224330.1	-	lincRNA	KNOWN	AC005019.3	1	2	-0.155446
chr7	13871856	13872513	13872184	ENSG00000213875.3	+	processed_pseudogene	KNOWN	AC005019.2	1	2	-0.076885
chr7	13891228	13991425	13941326	ENSG00000006468.13	-	protein_coding	KNOWN	ETV1	23	15	-0.202480
chr7	14010669	14010763	14010716	ENSG00000252374.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.395123
chr7	14070535	14071380	14070957	ENSG00000223445.1	-	processed_pseudogene	KNOWN	RPL6P21	1	1	-0.462597
chr7	14145049	14974777	14559913	ENSG00000136267.13	-	protein_coding	KNOWN	DGKB	13	26	-0.453230
chr7	14190795	14192157	14191476	ENSG00000233167.1	+	processed_pseudogene	KNOWN	EEF1A1P26	1	1	-0.662356
chr7	14775406	14775523	14775464	ENSG00000221428.1	+	miRNA	NOVEL	AC006150.2	1	1	-0.084435
chr7	14814131	14816565	14815348	ENSG00000226323.1	+	antisense	KNOWN	AC006150.1	1	3	-0.546410
chr7	14985378	14986074	14985726	ENSG00000225816.1	-	processed_pseudogene	KNOWN	GTF3AP5	1	1	-0.840193
chr7	15066207	15068651	15067429	ENSG00000227489.1	+	lincRNA	KNOWN	AC006458.3	1	2	-0.481566
chr7	15200318	15562015	15381166	ENSG00000187546.13	-	protein_coding	KNOWN	AGMO	4	13	-0.528463
chr7	15611212	15686812	15649012	ENSG00000106511.5	-	protein_coding	KNOWN	MEOX2	1	3	-0.583501
chr7	15667947	15681980	15674963	ENSG00000237070.1	+	antisense	KNOWN	AC005550.3	1	4	-0.501556
chr7	15688378	15695491	15691934	ENSG00000229108.1	+	lincRNA	KNOWN	MEOX2-AS1	1	2	-0.253979
chr7	15689075	15690854	15689964	ENSG00000225974.1	-	lincRNA	KNOWN	AC005550.5	1	2	-0.329284
chr7	15701435	15701752	15701593	ENSG00000235828.5	-	processed_pseudogene	KNOWN	RPL36AP26	1	1	-0.195106
chr7	15841297	15842360	15841828	ENSG00000229379.1	-	lincRNA	KNOWN	AC006041.1	1	2	-0.546269
chr7	16087527	16421322	16254424	ENSG00000214960.9	-	protein_coding	KNOWN	ISPD	3	10	-0.297673
chr7	16208945	16209265	16209105	ENSG00000224683.1	+	processed_pseudogene	KNOWN	RPL36AP29	1	1	-0.513377
chr7	16210488	16270604	16240546	ENSG00000229688.7	+	antisense	KNOWN	ISPD-AS1	5	5	-0.207247
chr7	16461481	16530580	16496030	ENSG00000171243.7	-	protein_coding	KNOWN	SOSTDC1	2	5	-0.165101
chr7	16471184	16471373	16471278	ENSG00000272537.1	+	lincRNA	KNOWN	GS1-166A23.1	1	1	-0.197515
chr7	16526880	16581568	16554224	ENSG00000205858.9	+	protein_coding	KNOWN	LRRC72	3	9	-0.297397
chr7	16583782	16586757	16585269	ENSG00000224280.1	-	processed_pseudogene	KNOWN	AC005014.5	1	1	0.091992
chr7	16593626	16594224	16593925	ENSG00000272361.2	-	lincRNA	KNOWN	GS1-166A23.2	1	1	-0.016785
chr7	16599776	16645817	16622796	ENSG00000106524.8	-	protein_coding	KNOWN	ANKMY2	6	11	0.076624
chr7	16646131	16706523	16676327	ENSG00000136261.14	+	protein_coding	KNOWN	BZW2	14	12	0.163515
chr7	16695871	16719898	16707884	ENSG00000235837.1	-	antisense	KNOWN	AC073333.8	1	4	0.119232
chr7	16753535	16784536	16769035	ENSG00000106537.7	+	protein_coding	KNOWN	TSPAN13	2	6	-0.099137
chr7	16789242	16789622	16789432	ENSG00000280130.1	+	protein_coding	KNOWN	AC073333.1	1	1	-0.176656
chr7	16791811	16833433	16812622	ENSG00000106541.11	-	protein_coding	KNOWN	AGR2	7	8	-0.104514
chr7	16849957	16850725	16850341	ENSG00000270593.1	-	processed_pseudogene	KNOWN	RP11-455J15.1	1	1	0.165200
chr7	16859405	16881987	16870696	ENSG00000173467.8	-	protein_coding	KNOWN	AGR3	4	8	-0.044508
chr7	16864267	16866308	16865287	ENSG00000232400.1	-	processed_pseudogene	KNOWN	RAD17P1	1	1	0.192103
chr7	16888621	16888885	16888753	ENSG00000227965.1	+	processed_pseudogene	KNOWN	AC098592.6	1	1	-0.253605
chr7	16938225	16938557	16938391	ENSG00000223867.1	+	processed_pseudogene	KNOWN	AC098592.7	1	1	0.203023
chr7	17033089	17033478	17033283	ENSG00000232841.1	-	processed_pseudogene	KNOWN	BRWD1P3	1	1	0.083003
chr7	17205652	17205928	17205790	ENSG00000278569.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.257593
chr7	17279834	17299357	17289595	ENSG00000237773.5	-	antisense	KNOWN	AC003075.4	8	4	-0.155884
chr7	17298622	17346152	17322387	ENSG00000106546.12	+	protein_coding	KNOWN	AHR	5	12	-0.264486
chr7	17373201	17373326	17373263	ENSG00000199473.1	-	snoRNA	NOVEL	SNORA63	1	1	0.147640
chr7	17374867	17466664	17420765	ENSG00000236318.1	+	lincRNA	KNOWN	AC019117.1	1	4	-0.038854
chr7	17434477	17460672	17447574	ENSG00000236039.1	-	lincRNA	KNOWN	AC019117.2	2	5	-0.066689
chr7	17463445	17558909	17511177	ENSG00000226598.1	-	lincRNA	KNOWN	AC017060.1	1	4	0.003151
chr7	17679549	17680659	17680104	ENSG00000228675.1	+	lincRNA	KNOWN	AC006482.1	1	2	0.116376
chr7	17790761	17940501	17865631	ENSG00000071189.21	-	protein_coding	KNOWN	SNX13	13	27	-0.280792
chr7	17940503	17942922	17941712	ENSG00000279048.1	+	TEC	KNOWN	RP11-511H23.2	1	1	-0.223510
chr7	17962079	17963029	17962554	ENSG00000236195.1	+	processed_pseudogene	KNOWN	RNMTL1P2	1	1	-0.049101
chr7	18000290	18000879	18000584	ENSG00000280340.1	-	TEC	KNOWN	RP11-511H23.1	1	1	-0.127789
chr7	18026774	18027863	18027318	ENSG00000229937.5	-	protein_coding	KNOWN	PRPS1L1	1	1	-0.048186
chr7	18086949	19002416	18544682	ENSG00000048052.21	+	protein_coding	KNOWN	HDAC9	29	26	-0.303038
chr7	18127220	18127309	18127264	ENSG00000221393.1	-	miRNA	KNOWN	MIR1302-6	1	1	-0.258505
chr7	18297339	18297436	18297387	ENSG00000223030.1	+	miRNA	NOVEL	AC091697.1	1	1	-0.535199
chr7	18429062	18430738	18429900	ENSG00000225000.1	-	antisense	KNOWN	AC010082.2	1	2	-0.110755
chr7	18807993	18808279	18808136	ENSG00000222164.1	-	misc_RNA	KNOWN	RN7SKP266	1	1	-0.135609
chr7	18892096	18899433	18895764	ENSG00000226522.1	-	antisense	KNOWN	AC004744.3	1	3	-0.086606
chr7	18948898	18949762	18949330	ENSG00000232492.1	-	processed_pseudogene	KNOWN	NPM1P13	1	1	-0.308546
chr7	19020991	19117672	19069331	ENSG00000122691.12	-	protein_coding	KNOWN	TWIST1	3	4	-0.178837
chr7	19112474	19114271	19113372	ENSG00000232821.1	+	antisense	KNOWN	AC003986.6	1	2	0.485656
chr7	19119933	19121916	19120924	ENSG00000236536.1	+	antisense	KNOWN	AC003986.7	1	2	0.485656
chr7	19144293	19146253	19145273	ENSG00000229533.1	+	antisense	KNOWN	AC003986.5	1	2	-0.155936
chr7	19144782	19145421	19145101	ENSG00000146618.3	-	protein_coding	KNOWN	FERD3L	1	1	-0.155936
chr7	19353534	19578606	19466070	ENSG00000223838.1	+	lincRNA	KNOWN	AC007091.1	1	6	-0.387577
chr7	19695462	19709087	19702274	ENSG00000105849.5	-	protein_coding	KNOWN	TWISTNB	2	4	-0.354755
chr7	19705358	19705436	19705397	ENSG00000265932.1	-	miRNA	KNOWN	MIR3146	1	1	-0.354755
chr7	19719310	19773598	19746454	ENSG00000173452.13	-	protein_coding	KNOWN	TMEM196	5	5	-0.561893
chr7	19719388	19719451	19719419	ENSG00000221576.2	+	miRNA	NOVEL	AC004543.1	1	1	-0.368560
chr7	19813685	19818090	19815887	ENSG00000237921.2	-	lincRNA	KNOWN	AC004543.2	1	4	-0.972139
chr7	19918981	20140453	20029717	ENSG00000243004.5	-	sense_overlapping	KNOWN	AC005062.2	8	6	-0.536372
chr7	20002765	20003247	20003006	ENSG00000213860.4	+	processed_pseudogene	KNOWN	RPL21P75	1	1	-0.301019
chr7	20096137	20130475	20113306	ENSG00000267055.1	+	lincRNA	KNOWN	RP11-486P11.1	1	5	-0.509458
chr7	20134655	20217404	20176029	ENSG00000183742.12	-	protein_coding	KNOWN	MACC1	5	7	-0.398626
chr7	20141916	20153531	20147723	ENSG00000228598.1	+	antisense	KNOWN	MACC1-AS1	1	4	-0.361335
chr7	20217577	20221700	20219638	ENSG00000233834.6	+	processed_transcript	KNOWN	AC005083.1	3	5	-0.153419
chr7	20296708	20311712	20304210	ENSG00000226097.5	+	lincRNA	KNOWN	AC099342.1	3	5	-0.269313
chr7	20328299	20331747	20330023	ENSG00000271133.5	-	antisense	KNOWN	CTA-293F17.1	2	4	-0.147076
chr7	20330702	20415754	20373228	ENSG00000105855.9	+	protein_coding	KNOWN	ITGB8	5	15	-0.401811
chr7	20377331	20377401	20377366	ENSG00000200753.1	+	snoRNA	NOVEL	SNORD56	1	1	-0.466004
chr7	20582072	20583206	20582639	ENSG00000179460.5	+	processed_pseudogene	KNOWN	EEF1A1P27	1	1	-0.341424
chr7	20588990	20590085	20589537	ENSG00000231525.1	+	processed_pseudogene	KNOWN	AC002486.2	1	2	-0.324850
chr7	20615207	20777038	20696122	ENSG00000004846.16	+	protein_coding	KNOWN	ABCB5	6	28	-0.383370
chr7	20641558	20641948	20641753	ENSG00000223866.1	-	processed_pseudogene	KNOWN	AC002486.3	1	1	-0.446874
chr7	20782283	20786886	20784584	ENSG00000164651.16	-	protein_coding	KNOWN	SP8	3	3	-0.164348
chr7	20827326	20827753	20827539	ENSG00000219451.3	+	processed_pseudogene	KNOWN	AC005251.3	1	1	-0.026190
chr7	20835431	21023148	20929289	ENSG00000232790.2	+	lincRNA	KNOWN	LINC01162	1	6	-0.422799
chr7	20843627	20843961	20843794	ENSG00000234839.1	+	processed_pseudogene	KNOWN	RPS26P30	1	1	-0.162109
chr7	21215537	21215830	21215683	ENSG00000243633.3	-	misc_RNA	KNOWN	RN7SL542P	1	1	-0.497146
chr7	21220213	21221428	21220820	ENSG00000225308.2	-	processed_pseudogene	KNOWN	ASS1P11	1	1	-0.497146
chr7	21381363	21381506	21381434	ENSG00000195024.2	+	snRNA	KNOWN	RNU1-15P	1	1	-0.238925
chr7	21400920	21401613	21401266	ENSG00000229949.1	-	processed_pseudogene	KNOWN	AC005094.2	1	2	-0.602382
chr7	21422269	21422368	21422318	ENSG00000266862.1	-	miRNA	NOVEL	AC004595.1	1	1	0.041366
chr7	21428034	21514822	21471428	ENSG00000105866.13	+	protein_coding	KNOWN	SP4	4	6	-0.284465
chr7	21471058	21471146	21471102	ENSG00000221783.1	+	miRNA	KNOWN	MIR1183	1	1	-0.384446
chr7	21543215	21901839	21722527	ENSG00000105877.17	+	protein_coding	KNOWN	DNAH11	12	83	-0.314800
chr7	21900900	21946084	21923492	ENSG00000164649.19	-	protein_coding	KNOWN	CDCA7L	10	11	-0.207855
chr7	22118238	22357144	22237691	ENSG00000136237.18	-	protein_coding	KNOWN	RAPGEF5	12	26	-0.067299
chr7	22298594	22298706	22298650	ENSG00000251993.1	+	rRNA	KNOWN	RNA5SP227	1	1	-0.093120
chr7	22380004	22380101	22380052	ENSG00000263927.1	+	miRNA	NOVEL	AC099759.1	1	1	0.083724
chr7	22419444	22632925	22526184	ENSG00000105889.14	-	protein_coding	KNOWN	STEAP1B	5	5	0.110797
chr7	22510616	22511999	22511307	ENSG00000233476.3	-	processed_pseudogene	KNOWN	EEF1A1P6	1	1	-0.080845
chr7	22563337	22573996	22568666	ENSG00000232759.1	+	antisense	KNOWN	AC002480.3	1	4	0.399390
chr7	22571607	22661792	22616699	ENSG00000225541.1	-	sense_overlapping	KNOWN	AC002480.5	1	2	0.243511
chr7	22589705	22591622	22590663	ENSG00000232949.1	+	antisense	KNOWN	AC002480.4	1	2	0.444048
chr7	22649960	22665533	22657746	ENSG00000238033.1	-	lincRNA	KNOWN	AC002480.2	1	5	0.339143
chr7	22725395	22727620	22726507	ENSG00000179428.2	-	antisense	KNOWN	AC073072.5	1	2	0.267969
chr7	22725884	22732002	22728943	ENSG00000136244.11	+	protein_coding	KNOWN	IL6	9	6	0.341569
chr7	22747675	22748804	22748239	ENSG00000228803.1	-	processed_pseudogene	KNOWN	AC073072.6	1	1	0.492775
chr7	22773646	22773993	22773819	ENSG00000234513.1	-	processed_pseudogene	KNOWN	AC073072.7	1	1	0.130466
chr7	22798447	22798979	22798713	ENSG00000281889.1	+	protein_coding	KNOWN	AC073072.1	1	3	0.466627
chr7	22812628	22822852	22817740	ENSG00000196683.10	-	protein_coding	KNOWN	TOMM7	7	4	0.228053
chr7	22854178	22861579	22857878	ENSG00000228649.8	+	processed_transcript	KNOWN	AC005682.5	3	4	0.477543
chr7	22856613	22856686	22856649	ENSG00000221740.1	+	snoRNA	KNOWN	SNORD93	1	1	0.477543
chr7	22863874	22881350	22872612	ENSG00000226329.2	-	unprocessed_pseudogene	KNOWN	AC005682.6	1	10	0.377774
chr7	22881893	22882390	22882141	ENSG00000226279.2	+	processed_pseudogene	KNOWN	RPL12P10	1	1	0.323939
chr7	22889371	23014130	22951750	ENSG00000122591.11	-	protein_coding	KNOWN	FAM126A	9	12	0.041442
chr7	23101228	23105703	23103465	ENSG00000230658.1	-	lincRNA	KNOWN	KLHL7-AS1	1	3	0.099565
chr7	23105758	23177914	23141836	ENSG00000122550.17	+	protein_coding	KNOWN	KLHL7	13	12	-0.006534
chr7	23129178	23129841	23129509	ENSG00000230042.1	+	processed_pseudogene	KNOWN	AK3P3	1	1	0.050172
chr7	23181827	23201011	23191419	ENSG00000136243.16	+	protein_coding	KNOWN	NUPL2	12	8	0.095690
chr7	23206013	23208045	23207029	ENSG00000226816.2	+	lincRNA	KNOWN	AC005082.12	1	1	0.157746
chr7	23235967	23275108	23255537	ENSG00000136235.15	+	protein_coding	KNOWN	GPNMB	14	11	0.214940
chr7	23298419	23298506	23298462	ENSG00000280508.1	+	miRNA	NOVEL	AC005082.1	1	1	0.334848
chr7	23298739	23311729	23305234	ENSG00000156928.4	+	protein_coding	KNOWN	MALSU1	5	4	0.287878
chr7	23310209	23470467	23390338	ENSG00000136231.13	-	protein_coding	KNOWN	IGF2BP3	18	15	0.128427
chr7	23365618	23365976	23365797	ENSG00000232627.1	+	processed_pseudogene	KNOWN	AC021876.4	1	1	0.238833
chr7	23396446	23396516	23396481	ENSG00000212264.1	+	snoRNA	NOVEL	SNORD65	1	1	-0.135242
chr7	23450658	23450722	23450690	ENSG00000252590.1	+	snRNA	KNOWN	RNU7-143P	1	1	0.184603
chr7	23480753	23480959	23480856	ENSG00000236654.2	+	processed_pseudogene	KNOWN	AC079780.3	1	1	0.258184
chr7	23489553	23489827	23489690	ENSG00000281884.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.258184
chr7	23490473	23491364	23490918	ENSG00000232818.2	+	processed_pseudogene	KNOWN	RPS2P32	1	1	0.171609
chr7	23491792	23491893	23491842	ENSG00000200847.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.171609
chr7	23504780	23532041	23518410	ENSG00000164548.10	-	protein_coding	KNOWN	TRA2A	12	10	0.383907
chr7	23562459	23564261	23563360	ENSG00000224785.1	-	processed_pseudogene	KNOWN	AC006026.9	1	1	-0.030492
chr7	23585062	23586355	23585708	ENSG00000232553.3	-	processed_pseudogene	KNOWN	CLK2P1	1	1	-0.116407
chr7	23597379	23644708	23621043	ENSG00000169193.11	+	protein_coding	KNOWN	CCDC126	8	5	-0.169799
chr7	23619333	23622826	23621079	ENSG00000227436.1	+	processed_pseudogene	KNOWN	FCF1P1	1	2	-0.245878
chr7	23638162	23638536	23638349	ENSG00000279448.1	-	protein_coding	KNOWN	AC006026.2	1	1	-0.068004
chr7	23655682	23655861	23655771	ENSG00000228953.1	+	processed_pseudogene	KNOWN	AC006026.12	1	1	-0.031880
chr7	23669277	23669354	23669315	ENSG00000223275.1	-	miRNA	NOVEL	AC006026.1	1	1	-0.031880
chr7	23680130	23703249	23691689	ENSG00000188732.10	+	protein_coding	KNOWN	FAM221A	8	8	-0.442999
chr7	23680195	23680786	23680490	ENSG00000234286.1	-	antisense	KNOWN	AC006026.13	1	2	-0.403777
chr7	23710167	23832513	23771340	ENSG00000196335.12	+	protein_coding	KNOWN	STK31	13	24	-0.412651
chr7	23721311	23721782	23721546	ENSG00000234800.2	-	processed_pseudogene	KNOWN	PCMTD1P3	1	1	-0.426882
chr7	23811144	23811660	23811402	ENSG00000231328.1	-	processed_pseudogene	KNOWN	TPT1P7	1	1	-0.380379
chr7	23891704	23897335	23894519	ENSG00000227930.1	-	lincRNA	KNOWN	AC009508.1	1	2	-0.337996
chr7	24132705	24132837	24132771	ENSG00000252041.1	+	rRNA	KNOWN	RNA5SP228	1	1	-0.124217
chr7	24196662	24255719	24226190	ENSG00000228944.1	-	antisense	KNOWN	AC004485.3	1	2	-0.384264
chr7	24284163	24291865	24288014	ENSG00000122585.7	+	protein_coding	KNOWN	NPY	3	5	-0.384722
chr7	24396702	24396769	24396735	ENSG00000281037.1	-	miRNA	NOVEL	AC002530.1	1	1	0.116376
chr7	24537332	24537438	24537385	ENSG00000206877.1	+	snRNA	KNOWN	RNU6-1103P	1	1	-0.560085
chr7	24573268	24694193	24633730	ENSG00000105926.15	+	protein_coding	KNOWN	MPP6	9	13	-0.361145
chr7	24589115	24589407	24589261	ENSG00000271096.1	-	processed_pseudogene	KNOWN	SUMO2P14	1	1	-0.371664
chr7	24674309	24674612	24674460	ENSG00000271330.1	-	processed_pseudogene	KNOWN	CTA-298G8.2	1	1	-0.323046
chr7	24698353	24758113	24728233	ENSG00000105928.13	-	protein_coding	KNOWN	DFNA5	14	10	0.181612
chr7	24796539	24981634	24889086	ENSG00000070882.12	-	protein_coding	KNOWN	OSBPL3	14	23	0.182531
chr7	24900812	24900905	24900858	ENSG00000238976.1	+	miRNA	NOVEL	AC004016.1	1	1	-0.142064
chr7	24906135	24906594	24906364	ENSG00000234999.1	-	processed_pseudogene	KNOWN	SNRPCP19	1	1	-0.142064
chr7	25120091	25125361	25122726	ENSG00000172115.8	-	protein_coding	KNOWN	CYCS	4	4	0.152292
chr7	25134697	25180356	25157526	ENSG00000153790.11	-	protein_coding	KNOWN	C7orf31	5	10	-0.134629
chr7	25185623	25188724	25187173	ENSG00000234406.1	+	processed_pseudogene	KNOWN	AC004129.7	1	3	-0.348581
chr7	25212170	25212965	25212567	ENSG00000213798.3	-	processed_pseudogene	KNOWN	AC004129.9	1	1	-0.566971
chr7	25224570	25228486	25226528	ENSG00000105954.2	-	protein_coding	KNOWN	NPVF	1	3	-0.566971
chr7	25264656	25264882	25264769	ENSG00000202233.2	+	snoRNA	NOVEL	U3	1	1	-0.181656
chr7	25265924	25266290	25266107	ENSG00000234922.1	-	processed_pseudogene	KNOWN	TSEN15P3	1	1	-0.181656
chr7	25321302	25326815	25324058	ENSG00000233824.1	-	lincRNA	KNOWN	AC003985.1	1	3	-0.337996
chr7	25358240	25359908	25359074	ENSG00000260951.1	-	lincRNA	KNOWN	RP5-978I12.1	1	1	-0.179921
chr7	25547762	25551062	25549412	ENSG00000227386.1	-	lincRNA	KNOWN	AC091705.1	1	2	-0.076065
chr7	25570668	25570758	25570713	ENSG00000222101.1	+	miRNA	NOVEL	AC091705.2	1	1	-0.138621
chr7	25593351	25750994	25672172	ENSG00000223561.6	-	lincRNA	KNOWN	AC003090.1	3	4	-0.191818
chr7	25689580	25689959	25689769	ENSG00000239622.1	-	processed_pseudogene	KNOWN	CTA-242H14.1	1	1	-0.094421
chr7	25948657	25949403	25949030	ENSG00000270933.1	-	lincRNA	KNOWN	CTD-2227E11.1	1	1	-0.475312
chr7	25949903	25950013	25949958	ENSG00000199085.2	-	miRNA	KNOWN	MIR148A	1	1	-0.446650
chr7	26060339	26060438	26060388	ENSG00000266430.1	+	miRNA	NOVEL	AC004520.1	1	1	-0.199239
chr7	26152240	26187125	26169682	ENSG00000050344.8	+	protein_coding	KNOWN	NFE2L3	3	4	0.369860
chr7	26173533	26174945	26174239	ENSG00000273237.1	-	antisense	KNOWN	CTB-119C2.1	1	1	0.413920
chr7	26189927	26201529	26195728	ENSG00000122566.20	-	protein_coding	KNOWN	HNRNPA2B1	8	13	0.284332
chr7	26201162	26213356	26207259	ENSG00000122565.18	+	protein_coding	KNOWN	CBX3	8	6	0.284115
chr7	26276195	26276606	26276400	ENSG00000232383.1	+	processed_pseudogene	KNOWN	AC010677.5	1	1	0.001794
chr7	26291895	26374329	26333112	ENSG00000086300.15	+	protein_coding	KNOWN	SNX10	9	7	0.039209
chr7	26372144	26376701	26374422	ENSG00000225792.1	-	antisense	KNOWN	AC004540.4	2	2	-0.178656
chr7	26398593	26494256	26446424	ENSG00000214870.8	+	lincRNA	KNOWN	AC004540.5	6	3	-0.176389
chr7	26533121	26538788	26535954	ENSG00000122548.5	-	lincRNA	KNOWN	KIAA0087	1	2	-0.229936
chr7	26538378	26541048	26539713	ENSG00000280255.1	+	TEC	KNOWN	RP5-1007F24.1	1	1	-0.229936
chr7	26551822	26557200	26554511	ENSG00000233760.1	+	lincRNA	KNOWN	AC004947.2	3	3	-0.384446
chr7	26637871	26647305	26642588	ENSG00000222004.7	+	lincRNA	KNOWN	C7orf71	2	4	-0.116001
chr7	26667062	26995239	26831150	ENSG00000005020.12	-	protein_coding	KNOWN	SKAP2	9	13	-0.349802
chr7	26922110	26922912	26922511	ENSG00000213787.3	+	processed_pseudogene	KNOWN	RPL7AP38	1	1	-0.119512
chr7	26982768	26983367	26983067	ENSG00000226059.2	-	processed_pseudogene	KNOWN	HMGB3P20	1	1	-0.425067
chr7	27022537	27022676	27022606	ENSG00000266055.1	+	miRNA	NOVEL	AC004079.1	1	1	-0.303937
chr7	27023737	27024907	27024322	ENSG00000214869.5	+	processed_pseudogene	KNOWN	TPM3P4	1	2	-0.303937
chr7	27048169	27048628	27048398	ENSG00000213786.3	+	processed_pseudogene	KNOWN	NHP2P2	1	1	-0.186984
chr7	27092993	27095996	27094494	ENSG00000105991.7	-	protein_coding	KNOWN	HOXA1	2	3	0.381498
chr7	27095647	27100265	27097956	ENSG00000233429.9	+	antisense	KNOWN	HOTAIRM1	6	3	0.381498
chr7	27096124	27096248	27096186	ENSG00000276528.1	+	misc_RNA	NOVEL	HOTAIRM1_1	1	1	0.381498
chr7	27098900	27099114	27099007	ENSG00000276771.1	+	misc_RNA	NOVEL	HOTAIRM1_2	1	1	0.381498
chr7	27099778	27099836	27099807	ENSG00000274864.1	+	misc_RNA	NOVEL	HOTAIRM1_3	1	1	0.381498
chr7	27099856	27099957	27099906	ENSG00000274396.1	+	misc_RNA	NOVEL	HOTAIRM1_4	1	1	0.381498
chr7	27099967	27100111	27100039	ENSG00000277694.1	+	misc_RNA	NOVEL	HOTAIRM1_5	1	1	0.381498
chr7	27100354	27102811	27101582	ENSG00000105996.6	-	protein_coding	KNOWN	HOXA2	2	2	0.381498
chr7	27106184	27152581	27129382	ENSG00000105997.22	-	protein_coding	KNOWN	HOXA3	7	5	0.213974
chr7	27107777	27134302	27121039	ENSG00000253552.7	+	antisense	KNOWN	HOXA-AS2	11	4	0.245848
chr7	27128507	27130799	27129653	ENSG00000197576.13	-	protein_coding	KNOWN	HOXA4	4	3	0.195970
chr7	27128969	27152561	27140765	ENSG00000273433.1	-	processed_transcript	KNOWN	RP1-170O19.22	1	3	0.139745
chr7	27129977	27155928	27142952	ENSG00000254369.6	+	antisense	KNOWN	HOXA-AS3	5	3	0.214427
chr7	27141052	27143668	27142360	ENSG00000106004.4	-	protein_coding	KNOWN	HOXA5	2	2	0.054124
chr7	27145396	27150603	27147999	ENSG00000106006.6	-	protein_coding	KNOWN	HOXA6	2	3	0.135419
chr7	27147366	27152598	27149982	ENSG00000272801.1	-	processed_transcript	KNOWN	RP1-170O19.23	1	2	0.402263
chr7	27153716	27157936	27155826	ENSG00000122592.7	-	protein_coding	KNOWN	HOXA7	3	3	0.754957
chr7	27158344	27158976	27158660	ENSG00000270182.1	+	sense_intronic	KNOWN	RP1-170O19.24	1	1	0.754957
chr7	27162435	27175180	27168807	ENSG00000078399.15	-	protein_coding	KNOWN	HOXA9	6	3	0.798080
chr7	27163535	27180013	27171774	ENSG00000257184.3	-	protein_coding	KNOWN	HOXA10-HOXA9	1	3	0.819424
chr7	27168619	27171915	27170267	ENSG00000253187.2	+	antisense	KNOWN	HOXA10-AS	3	3	0.816622
chr7	27169480	27169564	27169522	ENSG00000207584.1	-	miRNA	KNOWN	MIR196B	1	1	0.754957
chr7	27170591	27180261	27175426	ENSG00000253293.4	-	protein_coding	KNOWN	HOXA10	6	3	0.861037
chr7	27181510	27185223	27183366	ENSG00000005073.5	-	protein_coding	KNOWN	HOXA11	2	3	0.861037
chr7	27184518	27189293	27186905	ENSG00000240990.9	+	antisense	KNOWN	HOXA11-AS	5	5	0.861037
chr7	27185433	27185530	27185481	ENSG00000273961.1	+	misc_RNA	NOVEL	HOXA11-AS1_1	1	1	0.861037
chr7	27185832	27186018	27185925	ENSG00000278334.1	+	misc_RNA	NOVEL	HOXA11-AS1_2	1	1	0.861037
chr7	27186166	27186263	27186214	ENSG00000276496.1	+	misc_RNA	NOVEL	HOXA11-AS1_3	1	1	0.861037
chr7	27186573	27193448	27190010	ENSG00000253508.1	-	lincRNA	KNOWN	RP1-170O19.14	1	2	0.784595
chr7	27186892	27187124	27187008	ENSG00000277966.1	+	misc_RNA	NOVEL	HOXA11-AS1_4	1	1	0.861037
chr7	27187819	27188021	27187920	ENSG00000278592.1	+	misc_RNA	NOVEL	HOXA11-AS1_5	1	1	0.861037
chr7	27188816	27188994	27188905	ENSG00000278020.1	+	misc_RNA	NOVEL	HOXA11-AS1_6	1	1	0.861037
chr7	27193503	27200106	27196804	ENSG00000106031.7	-	protein_coding	KNOWN	HOXA13	2	2	0.708663
chr7	27198575	27207259	27202917	ENSG00000243766.7	+	antisense	KNOWN	HOTTIP	5	2	0.708663
chr7	27200465	27200521	27200493	ENSG00000276609.1	+	misc_RNA	NOVEL	HOTTIP_1	1	1	0.708663
chr7	27201844	27202219	27202031	ENSG00000278708.1	+	misc_RNA	NOVEL	HOTTIP_2	1	1	0.708663
chr7	27202302	27202638	27202470	ENSG00000277469.1	+	misc_RNA	NOVEL	HOTTIP_3	1	1	0.708663
chr7	27206139	27206303	27206221	ENSG00000277553.1	+	misc_RNA	NOVEL	HOTTIP_4	1	1	0.708663
chr7	27239243	27241228	27240235	ENSG00000253308.2	-	lincRNA	KNOWN	RP1-170O19.17	1	2	0.241505
chr7	27241429	27247229	27244329	ENSG00000253405.1	-	antisense	KNOWN	EVX1-AS	3	4	0.241505
chr7	27242700	27250493	27246596	ENSG00000106038.12	+	protein_coding	KNOWN	EVX1	4	4	0.247743
chr7	27269357	27269678	27269517	ENSG00000213783.4	-	processed_pseudogene	KNOWN	RPL35P4	1	1	0.339919
chr7	27328607	27329534	27329070	ENSG00000236569.3	-	processed_pseudogene	KNOWN	HNRNPA1P73	1	1	-0.159927
chr7	27361843	27409938	27385890	ENSG00000224322.1	+	lincRNA	KNOWN	AC004009.3	1	5	-0.091730
chr7	27380562	27381206	27380884	ENSG00000279655.1	+	TEC	KNOWN	AC004009.1	1	1	0.074504
chr7	27412164	27412891	27412527	ENSG00000279429.1	+	TEC	KNOWN	AC004009.2	1	1	0.171281
chr7	27458163	27458849	27458506	ENSG00000233830.2	-	processed_pseudogene	KNOWN	EIF4HP1	1	1	-0.173902
chr7	27461766	27462969	27462367	ENSG00000213781.3	+	processed_pseudogene	KNOWN	PSMC1P2	1	1	-0.173902
chr7	27491682	27492765	27492223	ENSG00000235574.1	-	processed_pseudogene	KNOWN	AC073150.6	1	1	-0.172508
chr7	27525442	27662995	27594218	ENSG00000106049.8	-	protein_coding	KNOWN	HIBADH	4	8	-0.119781
chr7	27733064	27740395	27736729	ENSG00000229893.2	-	antisense	KNOWN	AC004549.6	1	2	0.143831
chr7	27739331	27844564	27791947	ENSG00000106052.13	+	protein_coding	KNOWN	TAX1BP1	13	18	-0.089999
chr7	27830573	28180743	28005658	ENSG00000153814.11	-	protein_coding	KNOWN	JAZF1	8	5	0.155030
chr7	28118113	28118219	28118166	ENSG00000206623.1	-	snRNA	KNOWN	RNU6-979P	1	1	0.177568
chr7	28180322	28243917	28212119	ENSG00000234336.6	+	antisense	KNOWN	JAZF1-AS1	3	4	-0.068022
chr7	28279211	28279700	28279455	ENSG00000174495.12	-	processed_pseudogene	KNOWN	AC005017.2	1	1	-0.257951
chr7	28299321	28825894	28562607	ENSG00000146592.16	+	protein_coding	KNOWN	CREB5	15	11	-0.266232
chr7	28615097	28615888	28615492	ENSG00000225286.1	-	processed_pseudogene	KNOWN	AC005105.2	1	1	-0.276251
chr7	28953358	28958292	28955825	ENSG00000255690.2	-	protein_coding	KNOWN	TRIL	1	1	-0.205209
chr7	28957667	28959345	28958506	ENSG00000228421.2	+	lincRNA	KNOWN	AC005013.5	1	2	-0.205209
chr7	28979967	29013367	28996667	ENSG00000272568.5	+	antisense	KNOWN	CTB-113D17.1	3	6	0.016258
chr7	28987028	28988899	28987963	ENSG00000233517.1	+	antisense	KNOWN	AC005162.5	1	2	-0.116250
chr7	28995231	29195451	29095341	ENSG00000106066.13	-	protein_coding	KNOWN	CPVL	14	17	-0.305381
chr7	29080284	29082527	29081405	ENSG00000229452.1	+	antisense	KNOWN	AC005162.4	1	3	-0.387176
chr7	29088188	29088311	29088249	ENSG00000223052.1	-	miRNA	NOVEL	AC007096.1	1	1	-0.387176
chr7	29122274	29514328	29318301	ENSG00000106069.20	+	protein_coding	KNOWN	CHN2	33	13	-0.198006
chr7	29199540	29208970	29204255	ENSG00000235669.1	-	antisense	KNOWN	AC004593.3	1	3	-0.238398
chr7	29212302	29213214	29212758	ENSG00000237065.2	+	transcribed_processed_pseudogene	KNOWN	NANOGP4	1	1	-0.421586
chr7	29514225	29563670	29538947	ENSG00000223813.2	-	antisense	KNOWN	AC007255.8	2	3	0.075969
chr7	29551521	29552151	29551836	ENSG00000270196.1	+	processed_pseudogene	KNOWN	RP11-550A18.1	1	1	0.071814
chr7	29563811	29567295	29565553	ENSG00000176532.3	+	protein_coding	KNOWN	PRR15	2	2	0.071814
chr7	29598795	29685255	29642025	ENSG00000225264.3	-	transcribed_processed_pseudogene	KNOWN	ZNRF2P2	3	2	0.009493
chr7	29625870	29625983	29625926	ENSG00000223437.1	+	processed_pseudogene	KNOWN	TMSB4XP3	1	1	-0.052019
chr7	29650227	29742594	29696410	ENSG00000227855.3	+	transcribed_unprocessed_pseudogene	KNOWN	DPY19L2P3	3	19	-0.159808
chr7	29680734	29680828	29680781	ENSG00000212024.2	-	miRNA	KNOWN	MIR550A3	1	1	-0.046336
chr7	29806486	29917066	29861776	ENSG00000122574.10	+	protein_coding	KNOWN	WIPF3	3	9	-0.149079
chr7	29912528	29912632	29912580	ENSG00000238906.1	+	snoRNA	NOVEL	snoU13	1	1	-0.247318
chr7	29920103	29990289	29955196	ENSG00000136193.16	-	protein_coding	KNOWN	SCRN1	10	8	0.191297
chr7	29988600	30025660	30007130	ENSG00000227014.5	+	antisense	KNOWN	AC007285.6	2	4	0.006450
chr7	29993142	29993241	29993191	ENSG00000276574.1	-	miRNA	NOVEL	AC007285.1	1	1	-0.020274
chr7	30010587	30026684	30018635	ENSG00000106080.10	-	protein_coding	KNOWN	FKBP14	4	5	0.047598
chr7	30027404	30130483	30078943	ENSG00000106086.18	+	protein_coding	KNOWN	PLEKHA8	8	14	0.116970
chr7	30069658	30075115	30072386	ENSG00000231519.1	-	antisense	KNOWN	AC007285.7	1	3	0.126066
chr7	30134810	30162762	30148786	ENSG00000180354.15	+	protein_coding	KNOWN	MTURN	4	3	0.302182
chr7	30140870	30141417	30141143	ENSG00000230751.1	+	sense_intronic	KNOWN	AC007036.4	1	2	0.211952
chr7	30157531	30159534	30158532	ENSG00000251660.1	+	sense_overlapping	KNOWN	AC007036.5	1	2	0.409563
chr7	30167804	30168004	30167904	ENSG00000225907.1	+	processed_pseudogene	KNOWN	RPS27P16	1	1	0.409563
chr7	30176387	30179014	30177700	ENSG00000227017.1	-	lincRNA	KNOWN	AC007036.6	1	2	-0.050452
chr7	30284307	30367692	30325999	ENSG00000180233.10	+	protein_coding	KNOWN	ZNRF2	2	5	-0.066710
chr7	30289794	30289890	30289842	ENSG00000207771.1	+	miRNA	KNOWN	MIR550A1	1	1	-0.082613
chr7	30362400	30412502	30387451	ENSG00000281593.1	+	protein_coding	KNOWN	GS1-114I9.3	1	4	-0.247503
chr7	30371508	30372741	30372124	ENSG00000235859.5	+	processed_pseudogene	KNOWN	AC006978.6	1	1	-0.331220
chr7	30390885	30412375	30401630	ENSG00000281404.1	+	lincRNA	KNOWN	LINC01176	2	3	-0.188014
chr7	30424527	30478784	30451655	ENSG00000106100.10	-	protein_coding	KNOWN	NOD1	8	15	0.271046
chr7	30424672	30425412	30425042	ENSG00000272638.1	+	antisense	KNOWN	GS1-114I9.1	1	1	-0.128206
chr7	30496621	30504844	30500732	ENSG00000006625.17	-	protein_coding	KNOWN	GGCT	8	4	0.286808
chr7	30497077	30550761	30523919	ENSG00000281039.1	-	protein_coding	KNOWN	RP4-777O23.3	1	5	0.228723
chr7	30516309	30594809	30555559	ENSG00000196295.11	-	processed_transcript	KNOWN	AC005154.6	32	9	0.243370
chr7	30523143	30524535	30523839	ENSG00000244480.1	-	transcribed_processed_pseudogene	KNOWN	AC005154.7	1	1	0.083999
chr7	30525731	30533613	30529672	ENSG00000264520.1	+	lincRNA	KNOWN	RP4-777O23.2	1	3	0.194265
chr7	30544053	30544431	30544242	ENSG00000226874.1	+	processed_pseudogene	KNOWN	AC005154.8	1	1	0.324485
chr7	30550217	30551569	30550893	ENSG00000263683.1	+	lincRNA	KNOWN	RP4-777O23.1	1	2	0.528784
chr7	30594681	30634033	30614357	ENSG00000106105.13	+	protein_coding	KNOWN	GARS	10	17	0.153778
chr7	30651943	30700129	30676036	ENSG00000106113.18	-	protein_coding	KNOWN	CRHR2	8	14	0.530955
chr7	30697985	30757602	30727793	ENSG00000241644.2	+	protein_coding	KNOWN	INMT	4	4	0.419284
chr7	30742431	30742818	30742624	ENSG00000223419.1	-	processed_pseudogene	KNOWN	AC006022.4	1	1	0.160705
chr7	30752137	30892081	30822109	ENSG00000254959.6	+	protein_coding	KNOWN	INMT-FAM188B	2	20	0.311497
chr7	30771417	30892387	30831902	ENSG00000106125.14	+	protein_coding	KNOWN	FAM188B	3	18	0.274583
chr7	30796691	30803410	30800050	ENSG00000229263.1	-	antisense	KNOWN	AC004691.5	1	2	0.326897
chr7	30852273	30923812	30888042	ENSG00000250424.4	+	protein_coding	KNOWN	RP5-877J2.1	1	11	0.558025
chr7	30876004	30876149	30876076	ENSG00000281634.1	-	miRNA	NOVEL	AC004691.1	1	1	0.555392
chr7	30911855	30925516	30918685	ENSG00000240583.10	+	protein_coding	KNOWN	AQP1	5	5	0.425416
chr7	30938669	30993254	30965961	ENSG00000106128.18	+	protein_coding	KNOWN	GHRHR	12	13	0.179698
chr7	31052461	31111479	31081970	ENSG00000078549.14	+	protein_coding	KNOWN	ADCYAP1R1	7	17	0.165335
chr7	31119284	31119572	31119428	ENSG00000232887.1	-	processed_pseudogene	KNOWN	AC006466.5	1	1	0.160056
chr7	31316998	31317124	31317061	ENSG00000221751.1	+	miRNA	NOVEL	AC006380.1	1	1	-0.149016
chr7	31330711	31330896	31330803	ENSG00000271027.1	+	processed_pseudogene	KNOWN	RP11-463M14.1	1	1	-0.249625
chr7	31337461	31340894	31339177	ENSG00000164600.5	-	protein_coding	KNOWN	NEUROD6	2	3	-0.249625
chr7	31414645	31421286	31417965	ENSG00000231418.1	-	lincRNA	KNOWN	AC006380.3	1	4	-0.465620
chr7	31514071	31658720	31586395	ENSG00000180347.13	+	protein_coding	KNOWN	CCDC129	11	15	-0.445983
chr7	31686715	31708455	31697585	ENSG00000106341.10	+	protein_coding	KNOWN	PPP1R17	3	5	-0.412429
chr7	31751179	32299329	32025254	ENSG00000154678.16	-	protein_coding	KNOWN	PDE1C	11	19	-0.276542
chr7	31794248	31794345	31794296	ENSG00000223070.1	+	miRNA	NOVEL	AC006377.1	1	1	-0.532863
chr7	31941261	31941583	31941422	ENSG00000236460.1	+	processed_pseudogene	KNOWN	SNX2P2	1	1	-0.148271
chr7	32456963	32457758	32457360	ENSG00000226468.2	-	processed_pseudogene	KNOWN	AC018641.7	1	1	-0.104073
chr7	32471513	32472409	32471961	ENSG00000226421.1	+	processed_pseudogene	KNOWN	SLC25A5P5	1	1	-0.099628
chr7	32485332	32495283	32490307	ENSG00000106355.9	-	protein_coding	KNOWN	LSM5	10	6	0.078370
chr7	32495426	32588721	32542073	ENSG00000105778.17	+	protein_coding	KNOWN	AVL9	8	16	0.083107
chr7	32580949	32761787	32671368	ENSG00000229358.3	-	unprocessed_pseudogene	KNOWN	DPY19L1P1	1	22	-0.069513
chr7	32728569	32729011	32728790	ENSG00000237004.3	+	processed_pseudogene	KNOWN	ZNRF2P1	1	1	0.118303
chr7	32732981	32733077	32733029	ENSG00000207573.1	+	miRNA	KNOWN	MIR550A2	1	1	-0.390024
chr7	32758882	32759353	32759117	ENSG00000273014.1	+	lincRNA	KNOWN	RP11-225B17.2	1	1	-0.009888
chr7	32760279	32762924	32761601	ENSG00000281332.1	+	lincRNA	KNOWN	LINC00997	1	1	-0.009888
chr7	32788334	32788442	32788388	ENSG00000250756.1	+	unprocessed_pseudogene	KNOWN	RP11-225B17.1	1	1	0.193139
chr7	32791814	32791946	32791880	ENSG00000251999.1	+	snoRNA	NOVEL	SNORA31	1	1	0.446949
chr7	32812757	32838570	32825663	ENSG00000231952.3	+	unprocessed_pseudogene	KNOWN	DPY19L1P2	1	9	0.159499
chr7	32845394	32846061	32845727	ENSG00000272905.1	+	lincRNA	KNOWN	RP11-265E18.1	1	1	0.344912
chr7	32868172	32894131	32881151	ENSG00000170852.10	-	protein_coding	KNOWN	KBTBD2	8	4	0.165742
chr7	32916815	32943176	32929995	ENSG00000205763.13	-	transcribed_unprocessed_pseudogene	KNOWN	RP9P	2	6	0.323201
chr7	32951426	32951656	32951541	ENSG00000224573.1	+	processed_pseudogene	KNOWN	AC083863.5	1	1	0.378613
chr7	32957404	33006931	32982167	ENSG00000122642.10	+	protein_coding	KNOWN	FKBP9	14	11	0.422126
chr7	33001950	33002054	33002002	ENSG00000252821.1	-	snRNA	KNOWN	RNU6-388P	1	1	0.532120
chr7	33014114	33062797	33038455	ENSG00000122643.18	-	protein_coding	KNOWN	NT5C3A	14	11	0.048304
chr7	33036212	33036382	33036297	ENSG00000229054.1	-	processed_pseudogene	KNOWN	AC074338.4	1	1	-0.035013
chr7	33045798	33046090	33045944	ENSG00000241420.3	-	misc_RNA	KNOWN	RN7SL505P	1	1	-0.035013
chr7	33094797	33109401	33102099	ENSG00000164610.8	-	protein_coding	KNOWN	RP9	4	6	0.284637
chr7	33128988	33129143	33129065	ENSG00000228015.1	-	processed_pseudogene	KNOWN	AC074338.5	1	1	0.051350
chr7	33129244	33606068	33367656	ENSG00000122507.20	+	protein_coding	KNOWN	BBS9	16	24	-0.223928
chr7	33177740	33177838	33177789	ENSG00000222741.1	+	rRNA	KNOWN	RNA5SP229	1	1	-0.159927
chr7	33276834	33277091	33276962	ENSG00000224946.1	-	processed_pseudogene	KNOWN	AC007312.3	1	1	-0.295031
chr7	33379964	33380886	33380425	ENSG00000238090.1	+	processed_pseudogene	KNOWN	AC006195.2	1	1	-0.530773
chr7	33725981	33728456	33727218	ENSG00000173862.3	+	lincRNA	KNOWN	RP11-89N17.1	1	2	0.120561
chr7	33730292	33732064	33731178	ENSG00000227481.1	-	antisense	KNOWN	RP11-89N17.2	1	2	0.078252
chr7	33793168	33803156	33798162	ENSG00000236494.1	-	lincRNA	KNOWN	RP11-89N17.4	2	3	-0.094886
chr7	33868501	33874231	33871366	ENSG00000233219.1	-	lincRNA	KNOWN	RP11-89N17.3	1	3	0.168824
chr7	33904911	34155872	34030391	ENSG00000164619.8	+	protein_coding	KNOWN	BMPER	7	16	-0.017348
chr7	34209526	34256343	34232934	ENSG00000236212.1	+	lincRNA	KNOWN	AC009262.2	1	2	-0.171760
chr7	34297496	34297598	34297547	ENSG00000202431.1	-	snRNA	KNOWN	RNU6-438P	1	1	-0.278571
chr7	34312950	34313045	34312997	ENSG00000265985.1	-	miRNA	NOVEL	AC005686.1	1	1	0.004044
chr7	34346512	34871582	34609047	ENSG00000197085.11	-	processed_transcript	KNOWN	NPSR1-AS1	7	6	-0.295394
chr7	34658239	34878332	34768285	ENSG00000187258.13	+	protein_coding	KNOWN	NPSR1	9	10	-0.274668
chr7	34710757	34711480	34711118	ENSG00000235379.1	+	processed_pseudogene	KNOWN	RPL7P31	1	1	-0.431570
chr7	34750253	34752053	34751153	ENSG00000230356.1	-	processed_pseudogene	KNOWN	NCAPD2P1	1	1	-0.096081
chr7	34753424	34753719	34753571	ENSG00000242653.3	+	misc_RNA	KNOWN	RN7SL132P	1	1	-0.096081
chr7	34892417	34892549	34892483	ENSG00000251802.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.000574
chr7	34928876	35038271	34983573	ENSG00000173852.13	-	protein_coding	KNOWN	DPY19L1	8	22	-0.270275
chr7	34940760	34940834	34940797	ENSG00000221669.1	-	miRNA	KNOWN	MIR548N	1	1	-0.208132
chr7	35079989	35186041	35133015	ENSG00000189212.12	-	transcribed_unprocessed_pseudogene	KNOWN	DPY19L2P1	3	21	-0.534325
chr7	35169224	35169535	35169379	ENSG00000236592.5	+	processed_pseudogene	KNOWN	S100A11P2	1	1	-0.246331
chr7	35202430	35254147	35228288	ENSG00000164532.10	-	protein_coding	KNOWN	TBX20	2	8	-0.338412
chr7	35258381	35259729	35259055	ENSG00000226063.1	-	lincRNA	KNOWN	AC009531.2	1	2	-0.079961
chr7	35496021	35510263	35503142	ENSG00000235464.1	-	lincRNA	KNOWN	AC007652.1	1	2	-0.026491
chr7	35632659	35695571	35664115	ENSG00000122557.9	-	protein_coding	KNOWN	HERPUD2	7	9	-0.222447
chr7	35695214	35699413	35697313	ENSG00000271122.1	+	antisense	KNOWN	RP11-379H18.1	1	1	0.037544
chr7	35715034	35734887	35724960	ENSG00000227544.8	+	lincRNA	KNOWN	AC018647.3	5	5	0.017524
chr7	35751856	35800616	35776236	ENSG00000228878.7	-	lincRNA	KNOWN	SEPT7-AS1	3	6	0.008250
chr7	35768122	35768640	35768381	ENSG00000232736.1	-	processed_pseudogene	KNOWN	AC007551.2	1	1	0.084172
chr7	35800932	35907105	35854018	ENSG00000122545.18	+	protein_coding	KNOWN	SEPT7	20	14	-0.056022
chr7	35842889	35842973	35842931	ENSG00000221156.1	+	miRNA	NOVEL	AC007551.1	1	1	-0.006040
chr7	35847038	35847426	35847232	ENSG00000274328.1	-	processed_pseudogene	KNOWN	RP11-239C9.1	1	1	-0.006040
chr7	35930158	35930264	35930211	ENSG00000200446.1	-	snRNA	KNOWN	RNU6-1085P	1	1	0.180801
chr7	35933888	35934569	35934228	ENSG00000273580.1	+	unprocessed_pseudogene	KNOWN	RP11-609L3.2	1	1	0.180801
chr7	35946294	35972587	35959440	ENSG00000226102.3	+	unprocessed_pseudogene	KNOWN	SEPT7P3	1	6	-0.161085
chr7	35971147	35971567	35971357	ENSG00000270889.1	-	processed_pseudogene	KNOWN	RP11-609L3.1	1	1	-0.134284
chr7	36029611	36055431	36042521	ENSG00000232930.1	+	lincRNA	KNOWN	AC083864.3	1	4	0.299028
chr7	36079084	36085736	36082410	ENSG00000205745.2	+	lincRNA	KNOWN	AC083864.4	1	2	0.032010
chr7	36095272	36100653	36097962	ENSG00000261184.1	+	sense_overlapping	KNOWN	RP11-196O2.1	2	2	0.333000
chr7	36109024	36110872	36109948	ENSG00000228815.1	-	processed_pseudogene	KNOWN	MARK2P13	1	1	0.352554
chr7	36146842	36148024	36147433	ENSG00000271117.1	+	processed_pseudogene	KNOWN	RP11-377H23.1	1	1	0.499940
chr7	36153149	36301543	36227346	ENSG00000122547.10	+	protein_coding	KNOWN	EEPD1	5	9	0.298838
chr7	36228621	36228884	36228752	ENSG00000228770.1	-	processed_pseudogene	KNOWN	AC007327.6	1	1	0.374926
chr7	36229280	36231107	36230193	ENSG00000229679.1	-	antisense	KNOWN	AC007327.5	1	2	0.403240
chr7	36305631	36305904	36305767	ENSG00000234457.1	+	processed_pseudogene	KNOWN	AC006960.5	1	2	0.312118
chr7	36319775	36320479	36320127	ENSG00000260070.1	+	antisense	KNOWN	RP11-182J23.1	1	1	0.502994
chr7	36324221	36390125	36357173	ENSG00000164542.12	-	protein_coding	KNOWN	KIAA0895	13	7	-0.020985
chr7	36337667	36337778	36337722	ENSG00000201432.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.050027
chr7	36389806	36453791	36421798	ENSG00000011426.10	+	protein_coding	KNOWN	ANLN	13	24	-0.094429
chr7	36463023	36504513	36483768	ENSG00000237400.1	+	antisense	KNOWN	AC006960.7	1	4	-0.059013
chr7	36512949	36724549	36618749	ENSG00000136250.11	-	protein_coding	KNOWN	AOAH	12	22	-0.268105
chr7	36597834	36600120	36598977	ENSG00000230539.1	-	sense_intronic	KNOWN	AOAH-IT1	1	3	-0.233679
chr7	36642146	36642244	36642195	ENSG00000274526.1	-	miRNA	NOVEL	KF511026.1	1	1	-0.373672
chr7	36734004	36734535	36734269	ENSG00000272984.1	-	lincRNA	KNOWN	RP11-85E16.1	1	1	-0.286520
chr7	36750687	36763081	36756884	ENSG00000229424.1	+	lincRNA	KNOWN	AC007349.4	1	3	-0.245449
chr7	36781008	36782789	36781898	ENSG00000235728.1	+	lincRNA	KNOWN	AC007349.5	1	2	0.066901
chr7	36818959	36819690	36819324	ENSG00000225739.1	+	processed_pseudogene	KNOWN	NPM1P18	1	1	-0.399861
chr7	36838972	36841373	36840172	ENSG00000230831.1	+	antisense	KNOWN	AC007349.7	1	2	-0.344107
chr7	36854361	37449249	37151805	ENSG00000155849.15	-	protein_coding	KNOWN	ELMO1	19	22	-0.249474
chr7	36919357	36919432	36919394	ENSG00000221325.1	-	miRNA	KNOWN	MIR1200	1	1	-0.288753
chr7	36997796	37013630	37005713	ENSG00000224101.1	+	antisense	KNOWN	ELMO1-AS1	1	3	-0.158551
chr7	37105523	37105610	37105566	ENSG00000221157.1	-	miRNA	NOVEL	AC009196.1	1	1	-0.050302
chr7	37116779	37117185	37116982	ENSG00000224706.1	+	processed_pseudogene	KNOWN	RPS17P13	1	1	-0.214255
chr7	37351143	37351242	37351192	ENSG00000222869.1	+	snRNA	KNOWN	RNU6-565P	1	1	-0.281626
chr7	37375522	37376023	37375772	ENSG00000213744.3	+	processed_pseudogene	KNOWN	RPS10P14	1	1	0.042748
chr7	37419628	37419767	37419697	ENSG00000200113.1	+	snoRNA	NOVEL	SNORA51	1	1	-0.442345
chr7	37435115	37435216	37435165	ENSG00000201566.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.279102
chr7	37585500	37586329	37585914	ENSG00000178503.6	-	processed_pseudogene	KNOWN	NECAP1P1	1	1	-0.347992
chr7	37683796	37833788	37758792	ENSG00000187037.8	+	protein_coding	KNOWN	GPR141	5	4	-0.516213
chr7	37683843	37951941	37817892	ENSG00000086289.11	+	protein_coding	KNOWN	EPDR1	4	4	-0.468580
chr7	37821210	37821610	37821410	ENSG00000225314.1	+	processed_pseudogene	KNOWN	AC018634.9	1	1	-0.576802
chr7	37848597	37900401	37874499	ENSG00000086288.11	+	protein_coding	KNOWN	NME8	6	18	-0.406468
chr7	37905932	38025695	37965813	ENSG00000106483.11	-	protein_coding	KNOWN	SFRP4	3	6	-0.393818
chr7	38178222	38230671	38204446	ENSG00000010270.13	+	protein_coding	KNOWN	STARD3NL	7	10	-0.393201
chr7	38239580	38368091	38303835	ENSG00000227191.7	-	TR_C_gene	KNOWN	TRGC2	2	8	-0.204425
chr7	38253380	38253429	38253404	ENSG00000211687.1	-	TR_J_gene	KNOWN	TRGJ2	1	1	-0.522515
chr7	38256337	38256396	38256366	ENSG00000211688.1	-	TR_J_gene	KNOWN	TRGJP2	1	1	-0.522515
chr7	38257879	38265678	38261778	ENSG00000211689.7	-	TR_C_gene	KNOWN	TRGC1	1	3	-0.522515
chr7	38269491	38269540	38269515	ENSG00000211690.1	-	TR_J_gene	KNOWN	TRGJ1	1	1	-0.522515
chr7	38273587	38273647	38273617	ENSG00000211691.2	-	TR_J_gene	KNOWN	TRGJP	1	1	-0.406947
chr7	38276259	38276318	38276288	ENSG00000211692.1	-	TR_J_gene	KNOWN	TRGJP1	1	1	-0.406947
chr7	38291616	38292078	38291847	ENSG00000211693.2	-	TR_V_gene	KNOWN	TRGV11	1	1	-0.453832
chr7	38295763	38296233	38295998	ENSG00000231202.1	-	TR_V_pseudogene	KNOWN	TRGVB	1	1	-0.453832
chr7	38299811	38300322	38300066	ENSG00000211694.2	-	TR_V_gene	KNOWN	TRGV10	1	1	-0.453832
chr7	38311383	38311808	38311595	ENSG00000231916.1	+	processed_pseudogene	KNOWN	AC006033.22	1	1	0.003455
chr7	38317017	38318861	38317939	ENSG00000211695.2	-	TR_V_gene	KNOWN	TRGV9	1	2	0.003455
chr7	38322446	38322730	38322588	ENSG00000225992.1	-	TR_V_pseudogene	KNOWN	TRGVA	1	1	0.003455
chr7	38326070	38329643	38327856	ENSG00000272908.1	-	lincRNA	KNOWN	RP11-121A8.1	1	2	0.003455
chr7	38330343	38330935	38330639	ENSG00000211696.2	-	TR_V_gene	KNOWN	TRGV8	1	2	0.336299
chr7	38335041	38335514	38335277	ENSG00000249978.1	-	TR_V_pseudogene	KNOWN	TRGV7	1	2	0.336299
chr7	38340700	38340998	38340849	ENSG00000226212.2	-	TR_V_pseudogene	KNOWN	TRGV6	1	1	0.336299
chr7	38341577	38378804	38360190	ENSG00000281103.1	+	antisense	KNOWN	TRG-AS1	2	4	-0.103819
chr7	38343894	38350022	38346958	ENSG00000211697.3	-	TR_V_gene	KNOWN	TRGV5	2	3	0.334010
chr7	38345030	38345499	38345264	ENSG00000228668.1	-	TR_V_pseudogene	KNOWN	TRGV5P	1	2	0.336299
chr7	38353715	38354517	38354116	ENSG00000211698.2	-	TR_V_gene	KNOWN	TRGV4	1	2	-0.273658
chr7	38358512	38359162	38358837	ENSG00000211699.2	-	TR_V_gene	KNOWN	TRGV3	1	2	-0.273658
chr7	38362864	38363518	38363191	ENSG00000233306.2	-	TR_V_gene	KNOWN	TRGV2	1	2	-0.273658
chr7	38367586	38368169	38367877	ENSG00000211701.2	-	TR_V_gene	KNOWN	TRGV1	1	2	-0.273658
chr7	38383704	38631567	38507635	ENSG00000078053.16	-	protein_coding	KNOWN	AMPH	9	21	-0.212913
chr7	38531042	38531338	38531190	ENSG00000241756.3	-	misc_RNA	KNOWN	RN7SL83P	1	1	-0.223313
chr7	38655205	38656613	38655909	ENSG00000227404.1	+	processed_pseudogene	KNOWN	KRT8P20	1	1	-0.137795
chr7	38655893	38656025	38655959	ENSG00000281438.1	-	miRNA	NOVEL	AC011309.1	1	1	-0.137795
chr7	38685346	38687037	38686191	ENSG00000164556.7	-	processed_pseudogene	KNOWN	FAM183BP	1	2	-0.145337
chr7	38704222	38704315	38704268	ENSG00000274278.1	-	miRNA	NOVEL	AC004850.1	1	1	-0.185789
chr7	38722963	38932394	38827678	ENSG00000006715.15	-	protein_coding	KNOWN	VPS41	14	29	-0.261731
chr7	38977998	39493095	39235546	ENSG00000106536.19	+	protein_coding	KNOWN	POU6F2	10	11	-0.300989
chr7	38984243	39013551	38998897	ENSG00000233854.1	-	antisense	KNOWN	POU6F2-AS2	1	5	-0.510140
chr7	39294307	39294406	39294356	ENSG00000266481.1	-	miRNA	NOVEL	AC092174.1	1	1	-0.505462
chr7	39329003	39329134	39329068	ENSG00000206947.1	-	snoRNA	NOVEL	SNORA20	1	1	-0.133075
chr7	39404598	39406346	39405472	ENSG00000224122.1	-	antisense	KNOWN	POU6F2-AS1	1	4	-0.467042
chr7	39545646	39566239	39555942	ENSG00000227172.2	-	antisense	KNOWN	AC011290.4	1	3	-0.184686
chr7	39566376	39610320	39588348	ENSG00000241127.7	+	protein_coding	KNOWN	YAE1D1	6	3	0.200141
chr7	39569376	39570198	39569787	ENSG00000236015.1	-	processed_pseudogene	KNOWN	AC011290.5	1	1	-0.133554
chr7	39609610	39610290	39609950	ENSG00000231951.1	-	antisense	KNOWN	AC004837.4	1	2	0.225173
chr7	39609717	39610280	39609998	ENSG00000106540.4	+	processed_pseudogene	KNOWN	AC004837.3	1	1	0.202485
chr7	39623483	39708124	39665803	ENSG00000006451.7	+	protein_coding	KNOWN	RALA	5	5	0.208367
chr7	39685011	39685098	39685054	ENSG00000275912.1	-	miRNA	NOVEL	AC004837.1	1	1	0.091992
chr7	39700341	39703296	39701818	ENSG00000228554.1	-	antisense	KNOWN	AC004837.5	1	2	0.091992
chr7	39733632	39793092	39763362	ENSG00000188185.11	+	lincRNA	KNOWN	LINC00265	2	12	-0.088694
chr7	39768341	39768444	39768392	ENSG00000252480.1	+	snRNA	KNOWN	RNU6-719P	1	1	0.022729
chr7	39788967	39789304	39789135	ENSG00000270797.1	-	processed_pseudogene	KNOWN	RP5-1173I20.1	1	1	-0.406259
chr7	39796593	39797911	39797252	ENSG00000226220.1	-	processed_pseudogene	KNOWN	CICP22	1	1	0.569198
chr7	39816549	39868140	39842344	ENSG00000237251.2	+	unprocessed_pseudogene	KNOWN	AC072061.2	1	5	-0.185915
chr7	39833286	39833793	39833539	ENSG00000231198.1	-	processed_pseudogene	KNOWN	AC004987.10	1	1	-0.276876
chr7	39833571	39834718	39834144	ENSG00000233225.3	+	processed_pseudogene	KNOWN	AC004987.9	1	1	-0.276876
chr7	39854494	39855056	39854775	ENSG00000175741.5	-	processed_pseudogene	KNOWN	RWDD4P2	1	1	-0.323046
chr7	39888375	39888664	39888519	ENSG00000242855.3	+	misc_RNA	KNOWN	RN7SL496P	1	1	-0.301241
chr7	39947522	39949755	39948638	ENSG00000259826.1	-	antisense	KNOWN	RP11-467D6.1	1	1	0.017138
chr7	39950037	40097134	40023585	ENSG00000065883.14	+	protein_coding	KNOWN	CDK13	7	14	0.054230
chr7	40107288	40107454	40107371	ENSG00000273444.1	+	unprocessed_pseudogene	KNOWN	RP5-1147A1.2	1	1	0.178869
chr7	40115685	40115943	40115814	ENSG00000270577.1	+	processed_pseudogene	KNOWN	RP5-1147A1.1	1	1	0.122049
chr7	40126023	40134659	40130341	ENSG00000168303.6	-	protein_coding	KNOWN	MPLKIP	1	2	0.239612
chr7	40128121	40128232	40128176	ENSG00000199273.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.122049
chr7	40134977	40860763	40497870	ENSG00000175600.15	+	protein_coding	KNOWN	SUGCT	9	15	0.014169
chr7	40151613	40154151	40152882	ENSG00000248711.1	+	unprocessed_pseudogene	KNOWN	THUMPD3P1	1	3	0.144459
chr7	40538127	40546928	40542527	ENSG00000203446.2	-	antisense	KNOWN	AC004988.1	1	2	-0.074018
chr7	40775558	40785217	40780387	ENSG00000227658.1	+	sense_intronic	KNOWN	AC005160.3	1	4	0.084419
chr7	40964667	40979939	40972303	ENSG00000232458.1	-	lincRNA	KNOWN	LINC01450	1	3	-0.098810
chr7	41101604	41133507	41117555	ENSG00000224017.1	+	lincRNA	KNOWN	LINC01449	1	6	0.024106
chr7	41667168	41705335	41686251	ENSG00000236310.1	-	sense_overlapping	KNOWN	AC005027.3	1	3	-0.072671
chr7	41685114	41703108	41694111	ENSG00000122641.9	-	protein_coding	KNOWN	INHBA	3	3	0.056589
chr7	41693916	41779388	41736652	ENSG00000224116.6	+	antisense	KNOWN	INHBA-AS1	3	4	0.182931
chr7	41960950	42237870	42099410	ENSG00000106571.12	-	protein_coding	KNOWN	GLI3	6	15	0.050078
chr7	42113365	42113620	42113492	ENSG00000213721.3	+	processed_pseudogene	KNOWN	HMGN2P30	1	1	0.003636
chr7	42218409	42218514	42218461	ENSG00000276614.1	-	miRNA	NOVEL	AC005158.1	1	1	0.082832
chr7	42661726	42706447	42684086	ENSG00000238284.1	-	lincRNA	KNOWN	LINC01448	1	3	-0.327998
chr7	42794906	42802494	42798700	ENSG00000229161.2	+	unprocessed_pseudogene	KNOWN	TCP1P1	1	3	-0.632695
chr7	42829672	42844438	42837055	ENSG00000231539.1	-	lincRNA	KNOWN	AC010132.10	1	2	0.058903
chr7	42901272	42902639	42901955	ENSG00000261019.1	-	lincRNA	KNOWN	RP11-111K18.2	1	1	0.073730
chr7	42908726	42912305	42910515	ENSG00000136197.12	-	protein_coding	KNOWN	C7orf25	6	2	0.063096
chr7	42909273	42932174	42920723	ENSG00000256646.7	-	protein_coding	KNOWN	RP11-111K18.1	2	9	0.048699
chr7	42916857	42932223	42924540	ENSG00000106588.10	-	protein_coding	KNOWN	PSMA2	5	9	0.043433
chr7	42918741	42920084	42919412	ENSG00000234983.1	+	processed_pseudogene	KNOWN	AC010132.11	1	2	0.057226
chr7	42932200	42948958	42940579	ENSG00000106591.3	+	protein_coding	KNOWN	MRPL32	4	3	-0.038069
chr7	42954135	43113931	43034033	ENSG00000232006.8	-	lincRNA	KNOWN	AC005537.2	10	6	-0.015473
chr7	43096732	43096844	43096788	ENSG00000201933.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.091992
chr7	43112599	43566001	43339300	ENSG00000002746.14	+	protein_coding	KNOWN	HECW1	11	30	0.080103
chr7	43117896	43163187	43140541	ENSG00000181211.1	+	sense_intronic	KNOWN	HECW1-IT1	1	7	-0.013157
chr7	43150897	43151009	43150953	ENSG00000264069.2	+	miRNA	KNOWN	MIR3943	1	1	-0.060011
chr7	43194421	43194482	43194451	ENSG00000252983.1	+	snRNA	KNOWN	RNU7-35P	1	1	0.132864
chr7	43207762	43207866	43207814	ENSG00000223258.1	-	snRNA	KNOWN	RNU6-575P	1	1	0.132864
chr7	43239066	43249268	43244167	ENSG00000228680.1	-	antisense	KNOWN	AC004692.4	3	3	-0.165166
chr7	43274159	43274582	43274370	ENSG00000213717.3	+	processed_pseudogene	KNOWN	AC004692.5	1	1	0.247446
chr7	43508728	43522542	43515635	ENSG00000231638.1	-	antisense	KNOWN	AC011738.4	1	3	0.539608
chr7	43578888	43578972	43578930	ENSG00000252308.1	+	miRNA	NOVEL	AC011738.1	1	1	0.434384
chr7	43582758	43626786	43604772	ENSG00000164543.5	+	protein_coding	KNOWN	STK17A	3	7	0.120285
chr7	43608456	43729717	43669086	ENSG00000106603.17	-	protein_coding	KNOWN	COA1	19	8	0.196944
chr7	43758680	43807342	43783011	ENSG00000106605.10	+	protein_coding	KNOWN	BLVRA	5	9	0.436271
chr7	43767290	43767599	43767444	ENSG00000229497.1	+	processed_pseudogene	KNOWN	AC005189.6	1	1	0.359096
chr7	43866558	43869893	43868225	ENSG00000062582.13	-	protein_coding	KNOWN	MRPS24	5	4	0.339545
chr7	43866558	43906589	43886573	ENSG00000270617.1	-	protein_coding	KNOWN	URGCP-MRPS24	1	7	0.632483
chr7	43875894	43926411	43901152	ENSG00000106608.16	-	protein_coding	KNOWN	URGCP	13	7	0.535640
chr7	43918697	43920054	43919375	ENSG00000237972.1	+	processed_pseudogene	KNOWN	TUBG1P	1	1	0.240090
chr7	43926438	43956136	43941287	ENSG00000078967.12	+	protein_coding	KNOWN	UBE2D4	11	9	0.418604
chr7	43940895	44019175	43980035	ENSG00000214783.9	-	processed_transcript	KNOWN	POLR2J4	2	16	0.816714
chr7	43951910	44019151	43985530	ENSG00000273432.1	-	processed_transcript	KNOWN	RP5-1165K10.2	1	9	0.880908
chr7	43961590	43973325	43967457	ENSG00000241057.1	-	transcribed_unprocessed_pseudogene	KNOWN	AC004985.12	1	7	0.768688
chr7	43984994	43990207	43987600	ENSG00000239556.2	-	transcribed_unprocessed_pseudogene	KNOWN	AC004951.5	1	6	1.034043
chr7	44000889	44010122	44005505	ENSG00000136206.3	+	protein_coding	KNOWN	SPDYE1	1	7	1.030113
chr7	44004046	44007866	44005956	ENSG00000228434.1	-	lincRNA	KNOWN	AC004951.6	1	3	1.035408
chr7	44013562	44019170	44016366	ENSG00000272655.1	-	transcribed_unprocessed_pseudogene	KNOWN	POLR2J4	2	3	0.637960
chr7	44026951	44041892	44034421	ENSG00000228903.6	-	transcribed_unprocessed_pseudogene	KNOWN	RASA4CP	3	11	1.021036
chr7	44039171	44042306	44040738	ENSG00000235314.1	+	lincRNA	KNOWN	LINC00957	2	2	1.119213
chr7	44044640	44069456	44057048	ENSG00000136279.18	+	protein_coding	KNOWN	DBNL	22	13	1.088404
chr7	44051766	44051829	44051797	ENSG00000274083.1	+	miRNA	KNOWN	MIR6837	1	1	1.079919
chr7	44062727	44065587	44064157	ENSG00000164708.5	-	protein_coding	KNOWN	PGAM2	1	3	1.079919
chr7	44064908	44066079	44065493	ENSG00000239775.1	+	sense_overlapping	KNOWN	AC017116.11	2	2	1.079919
chr7	44072247	44082540	44077393	ENSG00000122678.14	-	protein_coding	KNOWN	POLM	18	11	1.033397
chr7	44073378	44073433	44073405	ENSG00000277792.1	-	miRNA	KNOWN	MIR6838	1	1	1.033397
chr7	44104361	44114562	44109461	ENSG00000106624.8	+	protein_coding	KNOWN	AEBP1	9	21	1.049310
chr7	44110849	44110912	44110880	ENSG00000264652.1	+	miRNA	KNOWN	MIR4649	1	1	1.298722
chr7	44114681	44124358	44119519	ENSG00000106628.10	-	protein_coding	KNOWN	POLD2	18	12	1.298722
chr7	44125752	44125873	44125812	ENSG00000252848.1	-	rRNA	KNOWN	RNA5SP230	1	1	1.298722
chr7	44138864	44141332	44140098	ENSG00000106631.8	-	protein_coding	KNOWN	MYL7	10	7	0.731110
chr7	44144271	44198170	44171220	ENSG00000106633.15	-	protein_coding	KNOWN	GCK	9	11	0.819298
chr7	44200968	44214294	44207631	ENSG00000106636.7	+	protein_coding	KNOWN	YKT6	7	8	0.684019
chr7	44217150	44334577	44275863	ENSG00000058404.19	-	protein_coding	KNOWN	CAMK2B	26	24	0.846048
chr7	44367140	44369292	44368216	ENSG00000279853.1	-	TEC	KNOWN	RP5-844F9.1	1	1	0.547836
chr7	44367176	44367270	44367223	ENSG00000280507.1	+	miRNA	NOVEL	AC004453.1	1	1	0.547836
chr7	44379121	44490880	44435000	ENSG00000015676.17	-	protein_coding	KNOWN	NUDCD3	11	7	0.644536
chr7	44467897	44468304	44468100	ENSG00000146677.7	+	processed_pseudogene	KNOWN	AC004453.8	1	1	0.646754
chr7	44503773	44503879	44503826	ENSG00000200456.1	-	snRNA	KNOWN	RNU6-1097P	1	1	0.626536
chr7	44511025	44511332	44511178	ENSG00000225443.1	-	processed_pseudogene	KNOWN	AC004938.5	1	1	0.561477
chr7	44512535	44541315	44526925	ENSG00000015520.14	-	protein_coding	KNOWN	NPC1L1	4	20	0.624337
chr7	44565417	44575051	44570234	ENSG00000136271.10	-	protein_coding	KNOWN	DDX56	12	14	0.776553
chr7	44577894	44582287	44580090	ENSG00000158604.14	-	protein_coding	KNOWN	TMED4	5	5	0.963477
chr7	44601032	44601487	44601259	ENSG00000271586.1	+	processed_pseudogene	KNOWN	RP11-52M17.1	1	1	0.676954
chr7	44606572	44709066	44657819	ENSG00000105953.14	+	protein_coding	KNOWN	OGDH	10	26	0.619073
chr7	44748581	44769881	44759231	ENSG00000122515.14	+	protein_coding	KNOWN	ZMIZ2	15	20	0.778769
chr7	44785050	44787340	44786195	ENSG00000228596.1	-	antisense	KNOWN	AC013436.6	1	2	1.043678
chr7	44796680	44824564	44810622	ENSG00000196262.13	+	protein_coding	KNOWN	PPIA	10	6	0.999527
chr7	44826791	44848083	44837437	ENSG00000105968.18	-	protein_coding	KNOWN	H2AFV	8	5	0.500121
chr7	44848416	44849568	44848992	ENSG00000234183.1	+	antisense	KNOWN	AC004854.4	2	2	0.453590
chr7	44876293	44885361	44880827	ENSG00000146676.6	-	protein_coding	KNOWN	PURB	1	1	0.345207
chr7	44881748	44881800	44881774	ENSG00000264326.1	-	miRNA	KNOWN	MIR4657	1	1	0.345207
chr7	44884953	44886393	44885673	ENSG00000272768.1	+	antisense	KNOWN	RP4-673M15.1	1	1	0.345207
chr7	44902790	44903074	44902932	ENSG00000281768.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.738355
chr7	44919669	44920329	44919999	ENSG00000230160.1	+	processed_pseudogene	KNOWN	AC004854.5	1	2	0.764235
chr7	44958999	44960909	44959954	ENSG00000260997.1	-	sense_overlapping	KNOWN	RP4-647J21.1	1	1	0.417478
chr7	44962662	44979098	44970880	ENSG00000136286.14	-	protein_coding	KNOWN	MYO1G	7	22	0.700033
chr7	44983023	44986961	44984992	ENSG00000232956.8	-	lincRNA	KNOWN	SNHG15	10	5	0.927872
chr7	44985378	44985510	44985444	ENSG00000277184.1	-	snoRNA	KNOWN	SNORA9	1	1	0.927872
chr7	44999475	45076469	45037972	ENSG00000136280.15	+	protein_coding	KNOWN	CCM2	19	10	0.511459
chr7	45031236	45031495	45031365	ENSG00000280981.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.392073
chr7	45080438	45088914	45084676	ENSG00000136274.8	-	protein_coding	KNOWN	NACAD	2	8	0.765046
chr7	45100100	45112047	45106073	ENSG00000136270.13	-	protein_coding	KNOWN	TBRG4	17	11	0.865822
chr7	45104349	45104482	45104415	ENSG00000206838.1	-	snoRNA	KNOWN	SNORA5A	1	1	0.919931
chr7	45104906	45105042	45104974	ENSG00000201772.1	-	snoRNA	KNOWN	SNORA5C	1	1	0.919931
chr7	45105968	45106099	45106033	ENSG00000200656.1	-	snoRNA	KNOWN	SNORA5B	1	1	0.919931
chr7	45157791	45186302	45172046	ENSG00000122679.8	+	protein_coding	KNOWN	RAMP3	3	4	0.243442
chr7	45303620	45304362	45303991	ENSG00000275295.1	+	processed_pseudogene	KNOWN	RP11-111G20.3	1	2	-0.282133
chr7	45391626	45392205	45391915	ENSG00000234359.3	-	processed_pseudogene	KNOWN	ELK1P1	1	1	0.130262
chr7	45460712	45542182	45501447	ENSG00000225537.1	+	lincRNA	KNOWN	AC073325.1	1	3	-0.245987
chr7	45534523	45534681	45534602	ENSG00000226999.1	-	processed_pseudogene	KNOWN	AC073325.2	1	1	-0.241135
chr7	45574140	45723116	45648628	ENSG00000164742.14	+	protein_coding	KNOWN	ADCY1	4	20	0.114247
chr7	45723780	45768985	45746382	ENSG00000214765.8	-	transcribed_unprocessed_pseudogene	KNOWN	SEPT7P2	9	14	0.031463
chr7	45769105	45815263	45792184	ENSG00000272556.2	+	transcribed_unprocessed_pseudogene	KNOWN	GTF2IP13	2	17	0.213727
chr7	45789585	45789688	45789636	ENSG00000212450.1	+	snRNA	KNOWN	RNU6-241P	1	1	0.281334
chr7	45816216	45819016	45817616	ENSG00000235955.1	-	processed_pseudogene	KNOWN	CICP20	1	1	0.405652
chr7	45816557	45821064	45818810	ENSG00000226838.1	+	unprocessed_pseudogene	KNOWN	AC096582.8	1	2	0.405652
chr7	45818582	45819097	45818839	ENSG00000251378.1	+	unprocessed_pseudogene	KNOWN	AC096582.9	1	1	0.405652
chr7	45843634	45843740	45843687	ENSG00000202350.1	+	snRNA	KNOWN	RNU6-326P	1	1	0.253273
chr7	45888357	45893668	45891012	ENSG00000146678.9	+	protein_coding	KNOWN	IGFBP1	3	4	0.466023
chr7	45912245	45921874	45917059	ENSG00000146674.14	-	protein_coding	KNOWN	IGFBP3	11	6	0.248717
chr7	45969657	45980191	45974924	ENSG00000237471.1	+	lincRNA	KNOWN	AC073115.6	1	3	0.466542
chr7	45990905	46000898	45995901	ENSG00000229628.1	+	lincRNA	KNOWN	AC073115.7	1	2	0.386105
chr7	45997540	45998071	45997805	ENSG00000233952.1	-	processed_pseudogene	KNOWN	FTLP15	1	1	0.386105
chr7	45999621	46000778	46000199	ENSG00000221971.3	-	processed_pseudogene	KNOWN	TTC4P1	1	1	0.386105
chr7	46144937	46145688	46145312	ENSG00000224547.1	+	processed_pseudogene	KNOWN	ZNF619P1	1	1	0.059202
chr7	46261064	46294469	46277766	ENSG00000229459.1	+	lincRNA	KNOWN	AC023669.1	1	4	0.009101
chr7	46302120	46343621	46322870	ENSG00000237760.1	+	lincRNA	KNOWN	AC092657.2	1	2	-0.047914
chr7	46476457	46477940	46477198	ENSG00000240355.1	-	lincRNA	KNOWN	AC004869.3	1	2	0.199438
chr7	46477822	46481578	46479700	ENSG00000230680.2	-	lincRNA	KNOWN	AC004869.2	1	3	0.199438
chr7	46634614	46634946	46634780	ENSG00000224519.1	+	processed_pseudogene	KNOWN	HMGN1P19	1	1	-0.031391
chr7	46673785	46759851	46716818	ENSG00000233539.5	-	lincRNA	KNOWN	AC011294.3	3	5	-0.003529
chr7	46781373	46783443	46782408	ENSG00000242948.1	+	transcribed_processed_pseudogene	KNOWN	EPS15P1	2	1	0.244801
chr7	46890625	47049678	46970151	ENSG00000232072.1	-	lincRNA	KNOWN	AC004901.1	2	3	0.054940
chr7	46969702	47027481	46998591	ENSG00000223829.5	+	processed_transcript	KNOWN	AC004870.4	3	4	-0.056644
chr7	47000620	47079128	47039874	ENSG00000229192.6	-	lincRNA	KNOWN	AC004870.3	2	4	0.069822
chr7	47026128	47026570	47026349	ENSG00000242552.1	-	processed_pseudogene	KNOWN	MRPL42P4	1	1	0.029061
chr7	47052793	47053674	47053233	ENSG00000214754.3	+	processed_pseudogene	KNOWN	AC004870.5	1	1	0.146440
chr7	47275154	47582558	47428856	ENSG00000136205.16	-	protein_coding	KNOWN	TNS3	12	31	0.604636
chr7	47621939	47629893	47625916	ENSG00000236078.1	+	lincRNA	KNOWN	LINC01447	1	4	0.586256
chr7	47655244	47661648	47658446	ENSG00000221845.4	+	lincRNA	KNOWN	C7orf65	1	3	0.473500
chr7	47695730	47979581	47837655	ENSG00000136273.11	-	protein_coding	KNOWN	HUS1	9	9	0.276726
chr7	47761476	47766772	47764124	ENSG00000146666.5	+	antisense	KNOWN	LINC00525	1	3	0.233036
chr7	47774652	47948491	47861571	ENSG00000158683.7	-	protein_coding	KNOWN	PKD1L1	4	57	0.273012
chr7	47795291	47819847	47807569	ENSG00000136275.10	+	antisense	KNOWN	C7orf69	2	4	0.353647
chr7	47956793	47957318	47957055	ENSG00000225507.1	+	processed_pseudogene	KNOWN	AC069282.6	1	1	0.150290
chr7	47987148	48029119	48008133	ENSG00000164744.12	-	protein_coding	KNOWN	SUN3	10	12	-0.026782
chr7	48035511	48061304	48048407	ENSG00000164746.13	+	protein_coding	KNOWN	C7orf57	6	9	0.174817
chr7	48088628	48108733	48098680	ENSG00000183696.13	+	protein_coding	KNOWN	UPP1	12	10	0.518762
chr7	48171458	48647496	48409477	ENSG00000179869.14	+	protein_coding	KNOWN	ABCA13	8	62	-0.318649
chr7	48652669	48652814	48652741	ENSG00000281791.1	-	miRNA	NOVEL	AC091770.1	1	1	-0.330699
chr7	48660575	48663305	48661940	ENSG00000228173.1	-	lincRNA	KNOWN	AC091770.3	1	2	-0.330699
chr7	48846426	48852898	48849662	ENSG00000225705.2	-	processed_pseudogene	KNOWN	AC004899.3	1	4	-0.495140
chr7	48847766	48851625	48849695	ENSG00000279578.1	+	TEC	KNOWN	RP4-815D20.1	1	1	-0.498445
chr7	48902556	48903891	48903223	ENSG00000229165.1	-	processed_pseudogene	KNOWN	GDI2P1	1	1	-0.151279
chr7	48919765	48926013	48922889	ENSG00000218305.3	+	processed_pseudogene	KNOWN	CDC14C	1	3	-0.300793
chr7	49029978	49030068	49030023	ENSG00000277285.1	-	miRNA	NOVEL	AC096752.1	1	1	-0.264368
chr7	49230137	49254816	49242476	ENSG00000234686.1	+	lincRNA	KNOWN	AC010971.1	1	4	-0.434229
chr7	49258493	49259846	49259169	ENSG00000270763.1	-	processed_pseudogene	KNOWN	DDX43P2	1	1	-0.948422
chr7	49760897	49762764	49761830	ENSG00000279104.1	-	TEC	KNOWN	RP11-138B9.1	1	1	-0.596922
chr7	49773661	49921950	49847805	ENSG00000188730.4	+	protein_coding	KNOWN	VWC2	1	4	-0.308916
chr7	49850421	50121329	49985875	ENSG00000042813.7	-	protein_coding	KNOWN	ZPBP	6	8	-0.393657
chr7	49942251	49944440	49943345	ENSG00000223893.1	-	processed_pseudogene	KNOWN	GNL2P1	1	1	-0.419169
chr7	50096036	50159830	50127933	ENSG00000164500.6	+	protein_coding	KNOWN	C7orf72	1	9	-0.524978
chr7	50141540	50142823	50142181	ENSG00000228005.1	-	antisense	KNOWN	AC020743.2	1	3	-0.802214
chr7	50202239	50204318	50203278	ENSG00000231681.1	-	lincRNA	KNOWN	AC020743.3	1	2	-0.122747
chr7	50274790	50275622	50275206	ENSG00000235620.1	-	lincRNA	KNOWN	AC020743.4	1	3	-0.387816
chr7	50304124	50405101	50354612	ENSG00000185811.16	+	protein_coding	KNOWN	IKZF1	18	8	-0.143461
chr7	50435380	50435486	50435433	ENSG00000200815.1	+	snRNA	KNOWN	RNU6-1091P	1	1	-0.111755
chr7	50444128	50542535	50493331	ENSG00000132436.11	-	protein_coding	KNOWN	FIGNL1	14	5	0.003744
chr7	50458436	50565457	50511946	ENSG00000132437.17	-	protein_coding	KNOWN	DDC	14	15	0.041377
chr7	50531759	50543463	50537611	ENSG00000226122.1	+	antisense	KNOWN	DDC-AS1	1	5	-0.132795
chr7	50590063	50793462	50691762	ENSG00000106070.17	-	protein_coding	KNOWN	GRB10	23	19	0.282690
chr7	50839363	50841992	50840677	ENSG00000236046.1	-	lincRNA	KNOWN	AC004920.3	1	2	-0.010857
chr7	50843578	50843732	50843655	ENSG00000228085.1	-	processed_pseudogene	KNOWN	AC004920.2	1	1	-0.010857
chr7	50866747	51022990	50944868	ENSG00000228204.2	+	antisense	KNOWN	RP4-724E13.2	2	4	-0.092608
chr7	50935350	50935493	50935421	ENSG00000201133.1	-	snoRNA	NOVEL	SNORA4	1	1	-0.376852
chr7	51016212	51316818	51166515	ENSG00000106078.17	-	protein_coding	KNOWN	COBL	10	14	-0.087733
chr7	51259429	51260167	51259798	ENSG00000231490.1	-	processed_pseudogene	KNOWN	RPL7L1P2	1	1	-0.359804
chr7	51382284	51384660	51383472	ENSG00000227233.1	+	processed_pseudogene	KNOWN	CICP17	1	1	0.052246
chr7	51386363	51387101	51386732	ENSG00000228897.1	-	processed_pseudogene	KNOWN	CTD-2021A8.2	1	1	0.052246
chr7	51388430	51389114	51388772	ENSG00000227080.2	-	processed_pseudogene	KNOWN	CTD-2021A8.3	1	1	0.052246
chr7	51600286	51600573	51600429	ENSG00000229478.1	-	processed_pseudogene	KNOWN	ROBO2P1	1	1	-0.141599
chr7	51614251	51630870	51622560	ENSG00000229403.1	+	lincRNA	KNOWN	RP4-718N17.2	1	2	-0.008208
chr7	51716657	51716922	51716789	ENSG00000242650.3	+	misc_RNA	KNOWN	RN7SL292P	1	1	-0.428162
chr7	51870335	51870402	51870368	ENSG00000274604.1	-	miRNA	NOVEL	AC006478.1	1	1	-0.229936
chr7	52165235	52192913	52179074	ENSG00000233960.1	-	lincRNA	KNOWN	RP11-153N17.1	1	4	-0.469981
chr7	52269437	52269569	52269503	ENSG00000253028.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.458482
chr7	52891837	52897807	52894822	ENSG00000234304.2	-	processed_pseudogene	KNOWN	SGOL1P2	1	2	-0.629473
chr7	53002420	53003429	53002924	ENSG00000223970.1	+	processed_pseudogene	KNOWN	RP11-598O8.1	1	1	-0.358401
chr7	53035642	53036924	53036283	ENSG00000221900.5	+	protein_coding	KNOWN	POM121L12	1	1	-0.586080
chr7	53187388	53188938	53188163	ENSG00000227344.2	+	processed_pseudogene	KNOWN	HAUS6P1	1	1	-0.713192
chr7	53316149	53316740	53316444	ENSG00000271194.1	+	processed_pseudogene	KNOWN	RNF138P2	1	1	-0.466975
chr7	53366058	53366209	53366133	ENSG00000199629.1	+	snRNA	KNOWN	RNU1-14P	1	1	-0.681237
chr7	53490148	53490439	53490293	ENSG00000222154.1	-	misc_RNA	KNOWN	RN7SKP218	1	1	-0.275465
chr7	53514992	53517116	53516054	ENSG00000234105.1	-	lincRNA	KNOWN	GS1-278J22.1	1	2	-0.193100
chr7	53559214	53568249	53563731	ENSG00000228627.1	-	lincRNA	KNOWN	GS1-278J22.2	1	3	-0.514472
chr7	53655509	53811931	53733720	ENSG00000205628.2	-	lincRNA	KNOWN	LINC01446	1	6	-0.540711
chr7	53776136	53776324	53776230	ENSG00000222355.1	+	snRNA	KNOWN	RNU2-29P	1	1	-0.475816
chr7	53779783	53780263	53780023	ENSG00000271306.1	+	processed_pseudogene	KNOWN	RAC1P9	1	2	-0.475816
chr7	53787167	53787298	53787232	ENSG00000232418.1	+	processed_pseudogene	KNOWN	RP11-678B3.1	1	1	-0.475816
chr7	53862233	53863339	53862786	ENSG00000235454.1	+	processed_pseudogene	KNOWN	HAUS6P3	1	1	-0.397046
chr7	53926676	53947744	53937210	ENSG00000238131.1	-	lincRNA	KNOWN	RP11-806J6.1	1	3	-0.300259
chr7	54201224	54202421	54201822	ENSG00000280920.1	+	lincRNA	KNOWN	HPVC1	1	1	-0.501238
chr7	54330697	54349849	54340273	ENSG00000231427.5	+	lincRNA	KNOWN	LINC01445	2	3	-0.676061
chr7	54419444	54420328	54419886	ENSG00000213673.3	+	processed_pseudogene	KNOWN	SLC25A5P3	1	1	-0.371255
chr7	54542325	54571080	54556702	ENSG00000170419.10	+	protein_coding	KNOWN	VSTM2A	8	6	-0.181226
chr7	54556970	54571726	54564348	ENSG00000224223.1	+	sense_overlapping	KNOWN	VSTM2A-OT1	1	4	-0.098432
chr7	54576052	54578794	54577423	ENSG00000228735.1	-	lincRNA	KNOWN	GS1-18A18.2	1	2	-0.552349
chr7	54621025	54621131	54621078	ENSG00000200471.1	+	snRNA	KNOWN	RNU6-1125P	1	1	-0.407315
chr7	54656358	54656734	54656546	ENSG00000232612.1	+	processed_pseudogene	KNOWN	RPL31P35	1	1	-0.114459
chr7	54752250	54759974	54756112	ENSG00000132432.13	-	protein_coding	KNOWN	SEC61G	7	5	0.293199
chr7	54759425	54804928	54782176	ENSG00000234707.2	+	antisense	KNOWN	RP11-745C15.2	1	3	0.190279
chr7	54933699	54938184	54935941	ENSG00000218586.3	+	processed_pseudogene	KNOWN	RP4-791C19.1	1	1	0.230320
chr7	55019021	55256620	55137820	ENSG00000146648.15	+	protein_coding	KNOWN	EGFR	11	28	0.327902
chr7	55179750	55188934	55184342	ENSG00000224057.1	-	antisense	KNOWN	EGFR-AS1	1	2	0.339919
chr7	55235965	55255635	55245800	ENSG00000280890.1	-	lincRNA	KNOWN	ELDR	1	4	0.474871
chr7	55244247	55245681	55244964	ENSG00000237210.1	+	processed_pseudogene	KNOWN	RP11-339F13.2	1	1	0.463551
chr7	55259809	55260256	55260032	ENSG00000230564.1	-	processed_pseudogene	KNOWN	CALM1P2	1	1	0.503060
chr7	55342316	55344958	55343637	ENSG00000230936.1	+	processed_pseudogene	KNOWN	RP11-775L16.1	1	1	0.091992
chr7	55365448	55433742	55399595	ENSG00000132434.9	+	protein_coding	KNOWN	LANCL2	5	10	0.222609
chr7	55436056	55572988	55504522	ENSG00000154978.12	-	protein_coding	KNOWN	VOPP1	17	6	0.367436
chr7	55573171	55588336	55580753	ENSG00000223475.1	+	antisense	KNOWN	RP11-310H4.1	1	3	0.106491
chr7	55592074	55593193	55592633	ENSG00000233977.1	+	lincRNA	KNOWN	RP11-310H4.2	1	2	0.488572
chr7	55593777	55595006	55594391	ENSG00000231394.1	+	lincRNA	KNOWN	RP11-310H4.3	1	2	0.488572
chr7	55638274	55638842	55638558	ENSG00000234844.1	-	processed_pseudogene	KNOWN	CDC42P2	1	1	-0.029145
chr7	55645620	55646951	55646285	ENSG00000235207.1	+	processed_pseudogene	KNOWN	TUBBP6	1	1	-0.029145
chr7	55656768	55678490	55667629	ENSG00000231317.1	-	unprocessed_pseudogene	KNOWN	RP11-310H4.6	1	6	-0.167868
chr7	55681074	55713252	55697163	ENSG00000176826.15	-	transcribed_unprocessed_pseudogene	KNOWN	FKBP9P1	2	9	0.063167
chr7	55685977	55686081	55686029	ENSG00000252857.1	+	snRNA	KNOWN	RNU6-389P	1	1	-0.150466
chr7	55731100	55731403	55731251	ENSG00000275853.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.329789
chr7	55732144	55732431	55732287	ENSG00000224971.1	+	processed_pseudogene	KNOWN	SUMO2P3	1	1	0.329789
chr7	55736779	55739605	55738192	ENSG00000237799.2	+	processed_pseudogene	KNOWN	CICP11	1	1	0.329789
chr7	55741525	55741869	55741697	ENSG00000275875.1	+	processed_pseudogene	KNOWN	RP11-613E4.5	1	1	0.329789
chr7	55743073	55743457	55743265	ENSG00000273720.1	+	processed_pseudogene	KNOWN	RP11-613E4.4	1	1	0.329789
chr7	55764797	55773288	55769042	ENSG00000226278.1	+	unprocessed_pseudogene	KNOWN	PSPHP1	1	2	0.311758
chr7	55789368	55789474	55789421	ENSG00000206729.1	+	snRNA	KNOWN	RNU6-1126P	1	1	0.109914
chr7	55793544	55862789	55828166	ENSG00000154997.8	-	protein_coding	KNOWN	SEPT14	2	10	-0.076401
chr7	55797946	55798480	55798213	ENSG00000235738.1	-	processed_pseudogene	KNOWN	RP11-419M24.2	1	1	-0.000037
chr7	55798034	55798876	55798455	ENSG00000225270.1	+	processed_pseudogene	KNOWN	CICP12	1	1	-0.000037
chr7	55810779	55811411	55811095	ENSG00000229762.1	-	processed_pseudogene	KNOWN	RP11-419M24.1	1	1	-0.068944
chr7	55876738	55877024	55876881	ENSG00000225018.1	-	processed_pseudogene	KNOWN	RP11-419M24.5	1	1	-0.029999
chr7	55877912	55878164	55878038	ENSG00000227499.1	+	processed_pseudogene	KNOWN	RP11-419M24.4	1	1	-0.029999
chr7	55887277	55955239	55921258	ENSG00000249773.3	+	protein_coding	KNOWN	RP11-15K19.2	1	8	0.170578
chr7	55887475	55942225	55914850	ENSG00000178665.14	+	protein_coding	KNOWN	ZNF713	6	7	0.159049
chr7	55951793	56000181	55975987	ENSG00000146729.9	+	protein_coding	KNOWN	GBAS	11	10	0.287868
chr7	55951819	55956501	55954160	ENSG00000239789.5	+	protein_coding	KNOWN	MRPS17	2	3	0.134303
chr7	56011051	56051604	56031327	ENSG00000146733.13	-	protein_coding	KNOWN	PSPH	12	8	0.591969
chr7	56051630	56063989	56057809	ENSG00000146731.10	+	protein_coding	KNOWN	CCT6A	9	14	0.340812
chr7	56055365	56055502	56055433	ENSG00000206603.1	+	snoRNA	NOVEL	SNORA22	1	1	0.340812
chr7	56060470	56060602	56060536	ENSG00000207168.1	+	snoRNA	KNOWN	SNORA15	1	1	0.340812
chr7	56064002	56080670	56072336	ENSG00000129103.17	+	protein_coding	KNOWN	SUMF2	19	10	0.530492
chr7	56080283	56092996	56086639	ENSG00000164776.9	-	protein_coding	KNOWN	PHKG1	10	11	0.634602
chr7	56101569	56106576	56104072	ENSG00000106153.12	-	protein_coding	KNOWN	CHCHD2	2	4	0.626536
chr7	56114681	56116400	56115540	ENSG00000185290.3	-	protein_coding	KNOWN	NUPR1L	1	2	0.254612
chr7	56163145	56163533	56163339	ENSG00000230191.1	+	processed_pseudogene	KNOWN	RP4-725G10.3	1	1	-0.061020
chr7	56175634	56176412	56176023	ENSG00000233028.1	+	processed_pseudogene	KNOWN	RP4-725G10.4	1	1	0.059931
chr7	56228634	56229782	56229208	ENSG00000227491.1	-	processed_pseudogene	KNOWN	CCNJP1	1	1	-0.116250
chr7	56288230	56291425	56289827	ENSG00000223559.1	+	processed_pseudogene	KNOWN	RP11-700P18.1	1	2	-0.084476
chr7	56304678	56305526	56305102	ENSG00000224155.2	-	processed_pseudogene	KNOWN	RP11-700P18.2	1	1	-0.194889
chr7	56322804	56323601	56323202	ENSG00000203462.2	+	unprocessed_pseudogene	KNOWN	RP11-814E24.1	1	2	-0.254566
chr7	56340231	56340337	56340284	ENSG00000202296.1	-	snRNA	KNOWN	RNU6-1335P	1	1	-0.051599
chr7	56360362	56360541	56360451	ENSG00000231299.1	-	unprocessed_pseudogene	KNOWN	SEPT14P24	1	1	0.038411
chr7	56362458	56365270	56363864	ENSG00000225371.1	+	processed_pseudogene	KNOWN	CICP8	1	1	0.038411
chr7	56380976	56381312	56381144	ENSG00000224370.1	+	processed_pseudogene	KNOWN	RP11-814E24.3	1	1	0.681513
chr7	56402070	56402173	56402121	ENSG00000223330.1	-	snRNA	KNOWN	RNU6-1052P	1	1	-0.048871
chr7	56408699	56409210	56408954	ENSG00000232944.1	-	processed_pseudogene	KNOWN	RP13-492C18.1	1	2	-0.048871
chr7	56421857	56448375	56435116	ENSG00000237268.2	-	transcribed_unprocessed_pseudogene	KNOWN	RP13-492C18.2	2	5	-0.225528
chr7	56462536	56467771	56465153	ENSG00000278205.1	+	unprocessed_pseudogene	KNOWN	RP11-760D2.13	1	2	-0.393435
chr7	56482105	56483295	56482700	ENSG00000225488.1	-	lincRNA	KNOWN	RP11-760D2.1	1	2	-0.147584
chr7	56490682	56491635	56491158	ENSG00000226485.1	+	processed_pseudogene	KNOWN	RBM22P3	1	1	0.020909
chr7	56493124	56497285	56495204	ENSG00000261275.1	+	lincRNA	KNOWN	RP11-760D2.11	1	1	0.020909
chr7	56502284	56503044	56502664	ENSG00000231504.1	-	processed_pseudogene	KNOWN	NMD3P2	1	1	0.020909
chr7	56525428	56526113	56525770	ENSG00000223740.1	-	processed_pseudogene	KNOWN	RP11-760D2.4	1	1	-0.349135
chr7	56534230	56538130	56536180	ENSG00000233288.1	-	lincRNA	KNOWN	RP11-760D2.5	1	2	-0.411177
chr7	56559221	56559958	56559589	ENSG00000224947.1	+	processed_pseudogene	KNOWN	VN1R25P	1	1	-0.578218
chr7	56567906	56568858	56568382	ENSG00000213650.3	-	processed_pseudogene	KNOWN	RP11-760D2.7	1	2	-0.578218
chr7	56577848	56578866	56578357	ENSG00000234716.1	+	processed_pseudogene	KNOWN	RP11-760D2.9	1	2	-0.154169
chr7	56597379	56598342	56597860	ENSG00000213067.2	+	processed_pseudogene	KNOWN	RP11-760D2.10	1	1	-0.478544
chr7	56603410	56603553	56603481	ENSG00000271047.1	+	processed_pseudogene	KNOWN	RP11-760D2.12	1	1	-0.478544
chr7	56631739	56632727	56632233	ENSG00000229909.1	-	processed_pseudogene	KNOWN	TRIM60P16	1	2	-0.229936
chr7	56638943	56650696	56644819	ENSG00000228303.1	-	unprocessed_pseudogene	KNOWN	RP11-10F11.2	1	3	-0.234242
chr7	56685036	56687366	56686201	ENSG00000277174.1	-	unprocessed_pseudogene	KNOWN	RP11-10F11.3	1	3	-0.403777
chr7	56736396	56736590	56736493	ENSG00000282879.1	-	processed_pseudogene	KNOWN	RP11-10F11.4	1	1	-0.124583
chr7	56804059	56804689	56804374	ENSG00000268187.6	+	protein_coding	KNOWN	AC118758.1	1	2	-0.367440
chr7	56805336	56808148	56806742	ENSG00000277253.1	+	processed_pseudogene	KNOWN	RP13-580B18.2	1	1	-0.367440
chr7	56809214	56848800	56829007	ENSG00000279072.1	-	lincRNA	KNOWN	RP13-580B18.4	6	5	0.441701
chr7	56875385	56882146	56878765	ENSG00000233437.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP13-580B18.1	2	5	-0.157368
chr7	56940341	56944353	56942347	ENSG00000225244.3	-	unprocessed_pseudogene	KNOWN	RP11-220H4.2	1	4	0.047598
chr7	56955785	56955864	56955824	ENSG00000264426.1	-	miRNA	KNOWN	MIR4283-1	1	1	0.619923
chr7	56991888	57009149	57000518	ENSG00000189166.6	+	unprocessed_pseudogene	KNOWN	TNRC18P3	1	11	0.275592
chr7	57014285	57020273	57017279	ENSG00000214668.4	-	unprocessed_pseudogene	KNOWN	SLC29A4P1	1	5	-0.042026
chr7	57060590	57061301	57060945	ENSG00000229508.2	-	unprocessed_pseudogene	KNOWN	PHKG1P4	1	2	-0.235303
chr7	57067950	57074664	57071307	ENSG00000275061.2	-	unprocessed_pseudogene	KNOWN	RP11-220H4.6	1	2	-0.196939
chr7	57119614	57139864	57129739	ENSG00000185177.12	-	protein_coding	KNOWN	ZNF479	3	6	-0.344008
chr7	57147986	57150347	57149166	ENSG00000235095.1	-	unprocessed_pseudogene	KNOWN	RP11-1217F2.1	1	3	-0.438349
chr7	57167880	57168651	57168265	ENSG00000231537.1	+	unprocessed_pseudogene	KNOWN	MTCO3P10	1	1	-0.458482
chr7	57169406	57170771	57170088	ENSG00000225295.1	+	unprocessed_pseudogene	KNOWN	MTND4P4	1	1	-0.362992
chr7	57170974	57172771	57171872	ENSG00000228440.1	+	unprocessed_pseudogene	KNOWN	MTND5P6	1	1	-0.289643
chr7	57173357	57174362	57173859	ENSG00000224880.1	+	unprocessed_pseudogene	KNOWN	MTCYBP29	1	1	-0.289643
chr7	57177409	57180052	57178730	ENSG00000224723.1	-	unprocessed_pseudogene	KNOWN	GUSBP10	1	4	-0.289643
chr7	57185788	57186202	57185995	ENSG00000230764.1	+	unprocessed_pseudogene	KNOWN	MTND1P4	1	1	-0.289643
chr7	57186412	57187441	57186926	ENSG00000237309.1	+	unprocessed_pseudogene	KNOWN	MTND2P6	1	1	-0.289643
chr7	57187892	57190140	57189016	ENSG00000236692.1	+	unprocessed_pseudogene	KNOWN	MTCO1P10	1	1	-0.281061
chr7	57191141	57191927	57191534	ENSG00000228851.1	+	unprocessed_pseudogene	KNOWN	RP11-1217F2.10	1	1	-0.152812
chr7	57192694	57194068	57193381	ENSG00000227584.1	+	unprocessed_pseudogene	KNOWN	MTND4P5	1	1	-0.152812
chr7	57194257	57196054	57195155	ENSG00000230531.1	+	unprocessed_pseudogene	KNOWN	MTND5P7	1	1	-0.152812
chr7	57196638	57197772	57197205	ENSG00000234671.1	+	unprocessed_pseudogene	KNOWN	MTCYBP5	1	1	-0.152812
chr7	57200825	57203597	57202211	ENSG00000169325.10	-	unprocessed_pseudogene	KNOWN	GUSBP12	1	4	-0.152812
chr7	57209865	57222174	57216019	ENSG00000234089.1	-	lincRNA	KNOWN	RP11-1217F2.15	2	2	0.359089
chr7	57227001	57227066	57227033	ENSG00000238431.1	+	snRNA	KNOWN	RNU7-157P	1	1	0.364723
chr7	57270839	57275197	57273018	ENSG00000274299.1	+	unprocessed_pseudogene	KNOWN	RP11-114G11.3	1	2	-0.284729
chr7	57402181	57404717	57403449	ENSG00000280225.1	-	TEC	KNOWN	RP11-114G11.4	1	1	0.448136
chr7	57404771	57416203	57410487	ENSG00000260653.5	+	lincRNA	KNOWN	RP11-114G11.5	2	5	0.219610
chr7	57405025	57405090	57405057	ENSG00000266168.1	+	miRNA	KNOWN	MIR3147	1	1	0.448136
chr7	57422830	57423725	57423277	ENSG00000227182.1	-	unitary_pseudogene	KNOWN	VN1R28P	1	1	0.027036
chr7	57424503	57425676	57425089	ENSG00000235368.1	+	processed_pseudogene	KNOWN	SAPCD2P2	1	1	0.027036
chr7	57450177	57473546	57461861	ENSG00000182111.8	+	protein_coding	KNOWN	ZNF716	1	4	-0.117867
chr7	57485166	57485895	57485530	ENSG00000270957.1	+	processed_pseudogene	KNOWN	RP11-1324A7.2	1	2	-0.446428
chr7	57599794	57610104	57604949	ENSG00000233601.1	+	unprocessed_pseudogene	KNOWN	NCOR1P3	1	2	-0.042043
chr7	57628479	57645189	57636834	ENSG00000243981.4	-	transcribed_processed_pseudogene	KNOWN	RP11-368M16.3	3	5	0.106008
chr7	57629285	57630151	57629718	ENSG00000270749.1	+	processed_pseudogene	KNOWN	RP11-368M16.10	1	1	-0.137740
chr7	57638725	57639112	57638918	ENSG00000229627.2	+	processed_pseudogene	KNOWN	BSNDP4	1	1	0.136235
chr7	57650381	57651119	57650750	ENSG00000230796.1	-	unprocessed_pseudogene	KNOWN	RP11-368M16.9	1	2	-0.064127
chr7	57650521	57650854	57650687	ENSG00000237639.2	+	unprocessed_pseudogene	KNOWN	RP11-368M16.5	1	1	-0.064127
chr7	57652736	57653459	57653097	ENSG00000233962.1	-	unprocessed_pseudogene	KNOWN	RP11-368M16.8	1	2	-0.064127
chr7	57652875	57653208	57653041	ENSG00000236261.1	+	unprocessed_pseudogene	KNOWN	RP11-368M16.6	1	1	-0.064127
chr7	57654822	57655392	57655107	ENSG00000234085.1	+	unprocessed_pseudogene	KNOWN	RP11-368M16.7	1	1	-0.064127
chr7	57770619	57770946	57770782	ENSG00000227015.1	-	unprocessed_pseudogene	KNOWN	RP11-548K12.6	1	1	0.194043
chr7	57770966	57771173	57771069	ENSG00000232161.1	+	unprocessed_pseudogene	KNOWN	RP11-548K12.7	1	1	0.194043
chr7	57772584	57773199	57772891	ENSG00000230271.1	-	unprocessed_pseudogene	KNOWN	RP11-548K12.5	1	1	0.194043
chr7	57773183	57773381	57773282	ENSG00000250923.1	+	unprocessed_pseudogene	KNOWN	RP11-548K12.8	1	1	0.194043
chr7	57776972	57777521	57777246	ENSG00000224484.1	-	unprocessed_pseudogene	KNOWN	RP11-548K12.4	1	1	0.194043
chr7	57817601	57818012	57817806	ENSG00000236907.1	-	unprocessed_pseudogene	KNOWN	RP11-548K12.3	1	1	-0.197515
chr7	57817996	57818197	57818096	ENSG00000250618.1	+	unprocessed_pseudogene	KNOWN	RP11-548K12.9	1	1	-0.197515
chr7	57819819	57820627	57820223	ENSG00000224653.1	+	unprocessed_pseudogene	KNOWN	RP11-548K12.10	1	2	-0.197515
chr7	57820032	57820410	57820221	ENSG00000223836.1	-	unprocessed_pseudogene	KNOWN	RP11-548K12.2	1	1	-0.197515
chr7	57822201	57822942	57822571	ENSG00000237236.1	+	unprocessed_pseudogene	KNOWN	RP11-548K12.11	1	2	-0.197515
chr7	57822465	57822801	57822633	ENSG00000231232.4	-	unprocessed_pseudogene	KNOWN	RP11-548K12.1	1	1	-0.197515
chr7	57828331	57837046	57832688	ENSG00000231484.1	+	unprocessed_pseudogene	KNOWN	RP11-548K12.12	1	3	-0.043903
chr7	57835309	57836251	57835780	ENSG00000271696.1	-	processed_pseudogene	KNOWN	RP11-548K12.13	1	1	-0.007544
chr7	62275361	62275678	62275519	ENSG00000233918.1	-	processed_pseudogene	KNOWN	RP11-715L17.1	1	1	-0.206401
chr7	63011463	63011569	63011516	ENSG00000207443.1	-	snRNA	KNOWN	RNU6-417P	1	1	-0.359704
chr7	63044827	63054431	63049629	ENSG00000227148.1	-	lincRNA	KNOWN	RP11-196D18.1	1	2	0.316972
chr7	63057453	63060084	63058768	ENSG00000233454.1	+	unprocessed_pseudogene	KNOWN	RP11-196D18.2	1	2	0.280601
chr7	63068087	63068151	63068119	ENSG00000265865.1	-	miRNA	NOVEL	AC069285.1	1	1	0.280601
chr7	63087070	63088261	63087665	ENSG00000233782.1	-	processed_pseudogene	KNOWN	ZNF90P3	1	1	0.241369
chr7	63113635	63114805	63114220	ENSG00000234312.1	-	processed_pseudogene	KNOWN	SAPCD2P4	1	1	0.041366
chr7	63117501	63154934	63136217	ENSG00000231523.1	-	unprocessed_pseudogene	KNOWN	SEPT14P1	1	6	-0.192559
chr7	63175940	63176019	63175979	ENSG00000199231.1	-	snoRNA	NOVEL	snoU2_19	1	1	-0.546334
chr7	63209219	63211822	63210520	ENSG00000237572.1	+	unprocessed_pseudogene	KNOWN	RP11-373D7.1	1	2	-0.282708
chr7	63233035	63234245	63233640	ENSG00000226075.2	-	unprocessed_pseudogene	KNOWN	PHKG1P1	1	4	0.138385
chr7	63233115	63241645	63237380	ENSG00000244550.1	-	processed_transcript	KNOWN	RP5-905H7.3	1	3	0.138385
chr7	63241590	63248321	63244955	ENSG00000240651.1	-	unprocessed_pseudogene	KNOWN	SEPT7P4	1	2	0.138385
chr7	63263065	63263456	63263260	ENSG00000236638.1	+	processed_pseudogene	KNOWN	RP5-905H7.4	1	1	-0.525151
chr7	63291518	63304056	63297787	ENSG00000185037.9	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF733P	2	4	-0.426668
chr7	63326674	63354326	63340500	ENSG00000226587.1	-	lincRNA	KNOWN	RP5-905H7.9	1	3	-0.326821
chr7	63342711	63343200	63342955	ENSG00000227298.1	+	processed_pseudogene	KNOWN	ARAFP3	1	1	-0.353568
chr7	63345840	63346732	63346286	ENSG00000232165.1	+	processed_pseudogene	KNOWN	RP5-905H7.6	1	1	-0.353568
chr7	63348861	63351774	63350317	ENSG00000230000.2	+	processed_transcript	KNOWN	RP5-905H7.11	3	2	-0.344134
chr7	63349154	63350059	63349606	ENSG00000227545.1	-	processed_pseudogene	KNOWN	RP5-905H7.10	1	1	-0.352541
chr7	63354033	63354365	63354199	ENSG00000227923.1	+	processed_pseudogene	KNOWN	RP5-905H7.7	1	1	-0.338085
chr7	63354457	63359306	63356881	ENSG00000229301.1	+	lincRNA	KNOWN	RP5-905H7.8	1	3	-0.338085
chr7	63367427	63368156	63367791	ENSG00000236284.1	-	processed_pseudogene	KNOWN	VN1R31P	1	1	-0.338085
chr7	63377329	63378233	63377781	ENSG00000230361.1	+	unitary_pseudogene	KNOWN	VN1R32P	1	1	-0.136036
chr7	63380466	63385789	63383127	ENSG00000230600.1	-	lincRNA	KNOWN	RP11-73B2.2	1	2	-0.136036
chr7	63388808	63393657	63391232	ENSG00000232817.1	-	lincRNA	KNOWN	RP11-73B2.4	1	3	0.022630
chr7	63393749	63394109	63393929	ENSG00000223889.1	-	processed_pseudogene	KNOWN	RP11-73B2.3	1	1	0.074290
chr7	63393788	63422046	63407917	ENSG00000227305.1	+	lincRNA	KNOWN	RP11-340I6.3	1	4	-0.083160
chr7	63394277	63395439	63394858	ENSG00000234387.1	+	lincRNA	KNOWN	RP11-340I6.1	1	2	0.074290
chr7	63396341	63399250	63397795	ENSG00000268181.3	-	processed_transcript	KNOWN	RP11-73B2.7	2	2	0.074290
chr7	63398046	63398957	63398501	ENSG00000234467.1	+	processed_pseudogene	KNOWN	SLC25A1P2	1	1	0.074290
chr7	63401385	63402271	63401828	ENSG00000227426.1	-	unitary_pseudogene	KNOWN	VN1R33P	1	1	0.074290
chr7	63404842	63405400	63405121	ENSG00000224368.1	-	processed_pseudogene	KNOWN	ARAFP2	1	1	0.074290
chr7	63449819	63456687	63453253	ENSG00000197990.6	+	unprocessed_pseudogene	KNOWN	ZNF734P	1	3	-0.338633
chr7	63480598	63480989	63480793	ENSG00000230132.1	-	processed_pseudogene	KNOWN	RP5-1193P9.2	1	1	-0.640197
chr7	63495799	63502536	63499167	ENSG00000164740.5	+	processed_pseudogene	KNOWN	SEPT7P5	1	2	-0.446222
chr7	63509303	63510165	63509734	ENSG00000228645.2	+	processed_pseudogene	KNOWN	PHKG1P2	1	1	-0.415170
chr7	63556598	63562588	63559593	ENSG00000214660.6	+	unprocessed_pseudogene	KNOWN	SLC29A4P2	1	5	0.219371
chr7	63567743	63585075	63576409	ENSG00000223566.1	-	unprocessed_pseudogene	KNOWN	TNRC18P2	1	11	0.337369
chr7	63621090	63621169	63621129	ENSG00000265214.1	+	miRNA	KNOWN	MIR4283-2	1	1	0.344476
chr7	63632608	63636617	63634612	ENSG00000226401.3	+	unprocessed_pseudogene	KNOWN	RP5-965K10.3	1	4	0.532564
chr7	63699390	63700441	63699915	ENSG00000226411.1	+	unprocessed_pseudogene	KNOWN	CTD-2526L21.2	1	2	0.134636
chr7	63762476	63765094	63763785	ENSG00000275217.2	+	protein_coding	KNOWN	AC079355.1	1	3	0.576587
chr7	63768257	63771047	63769652	ENSG00000271466.1	-	processed_pseudogene	KNOWN	CICP24	1	2	0.516443
chr7	63789909	63790098	63790003	ENSG00000227397.1	+	processed_pseudogene	KNOWN	CTD-2526L21.3	1	1	0.216867
chr7	63843314	63843505	63843409	ENSG00000236574.1	+	processed_pseudogene	KNOWN	RP11-340I6.4	1	1	-0.266462
chr7	63876341	63877350	63876845	ENSG00000225451.1	+	processed_pseudogene	KNOWN	RP11-340I6.5	1	1	-0.089178
chr7	63888200	63900794	63894497	ENSG00000236299.7	-	lincRNA	KNOWN	RP11-340I6.7	8	6	0.219636
chr7	63893286	63894641	63893963	ENSG00000235720.1	+	processed_pseudogene	KNOWN	RP11-340I6.6	1	1	0.271100
chr7	63900823	63917994	63909408	ENSG00000226581.1	+	lincRNA	KNOWN	RP11-340I6.8	1	4	0.085473
chr7	63901068	63901133	63901100	ENSG00000263891.1	+	miRNA	NOVEL	AC092634.1	1	1	0.271100
chr7	63908966	63910453	63909709	ENSG00000226342.1	-	processed_pseudogene	KNOWN	NMD3P1	1	1	0.149379
chr7	63924787	63926306	63925546	ENSG00000227910.1	-	transcribed_processed_pseudogene	KNOWN	RP11-73B2.6	3	2	-0.127575
chr7	63926836	63926901	63926868	ENSG00000265017.1	+	miRNA	NOVEL	AC092634.2	1	1	-0.127575
chr7	63931141	63931968	63931554	ENSG00000213645.2	+	processed_pseudogene	KNOWN	SLC25A1P3	1	1	-0.323046
chr7	63934449	63935331	63934890	ENSG00000233173.1	-	unitary_pseudogene	KNOWN	VN1R34P	1	1	-0.323046
chr7	63937905	63938509	63938207	ENSG00000231264.1	-	processed_pseudogene	KNOWN	ARAFP1	1	1	-0.323046
chr7	63963431	63964123	63963777	ENSG00000228660.1	-	unprocessed_pseudogene	KNOWN	VN1R35P	1	1	-0.205844
chr7	63965834	63966124	63965979	ENSG00000230639.1	-	unprocessed_pseudogene	KNOWN	VN1R36P	1	1	-0.205844
chr7	63980385	63981477	63980931	ENSG00000176232.10	-	unprocessed_pseudogene	KNOWN	RP5-1193P9.4	1	2	-0.227626
chr7	63993904	63994006	63993955	ENSG00000278577.1	+	unprocessed_pseudogene	KNOWN	RP11-340I6.11	1	1	0.034441
chr7	64005576	64016130	64010853	ENSG00000241149.2	+	unprocessed_pseudogene	KNOWN	RP11-561N12.2	1	3	-0.331575
chr7	64027852	64030105	64028978	ENSG00000228564.1	-	antisense	KNOWN	LINC01005	2	3	-0.567603
chr7	64045443	64078549	64061996	ENSG00000214652.5	+	protein_coding	KNOWN	ZNF727	1	4	-0.209957
chr7	64085560	64086576	64086068	ENSG00000223558.1	+	processed_pseudogene	KNOWN	TRIM60P17	1	2	-0.391687
chr7	64100305	64150721	64125513	ENSG00000224458.3	+	transcribed_unprocessed_pseudogene	KNOWN	GUSBP6	2	7	0.066961
chr7	64104093	64105295	64104694	ENSG00000248704.1	-	unprocessed_pseudogene	KNOWN	MTND4P2	1	1	-0.249625
chr7	64105292	64105576	64105434	ENSG00000248315.1	-	unprocessed_pseudogene	KNOWN	MTND4LP2	1	1	-0.249625
chr7	64105654	64105995	64105824	ENSG00000230052.1	-	unprocessed_pseudogene	KNOWN	MTND3P2	1	1	-0.249625
chr7	64106065	64106819	64106442	ENSG00000233385.1	-	unprocessed_pseudogene	KNOWN	MTCO3P8	1	1	-0.249625
chr7	64106822	64107572	64107197	ENSG00000227035.1	-	unprocessed_pseudogene	KNOWN	RP11-3N2.8	1	2	-0.249625
chr7	64107829	64108486	64108157	ENSG00000234234.1	-	unprocessed_pseudogene	KNOWN	MTCO2P8	1	1	-0.249625
chr7	64108625	64110147	64109386	ENSG00000234700.1	-	unprocessed_pseudogene	KNOWN	MTCO1P8	1	1	-0.194388
chr7	64110547	64111550	64111048	ENSG00000230252.1	-	unprocessed_pseudogene	KNOWN	MTND2P4	1	1	0.318420
chr7	64111752	64112572	64112162	ENSG00000235646.1	-	unprocessed_pseudogene	KNOWN	MTND1P2	1	1	0.318420
chr7	64140495	64150058	64145276	ENSG00000229881.1	+	lincRNA	KNOWN	RP11-321E8.4	1	3	-0.028460
chr7	64141538	64142401	64141969	ENSG00000236976.1	-	processed_pseudogene	KNOWN	RP11-165H4.2	1	1	-0.028638
chr7	64149685	64150432	64150058	ENSG00000213643.3	-	processed_pseudogene	KNOWN	VN1R37P	1	1	-0.011923
chr7	64180006	64180892	64180449	ENSG00000235227.1	-	unitary_pseudogene	KNOWN	VN1R38P	1	1	-0.380597
chr7	64181710	64182893	64182301	ENSG00000213644.2	+	processed_pseudogene	KNOWN	SAPCD2P1	1	1	-0.380597
chr7	64207090	64220508	64213799	ENSG00000223614.5	+	protein_coding	KNOWN	ZNF735	1	4	-0.191583
chr7	64228474	64266931	64247702	ENSG00000197123.9	+	protein_coding	KNOWN	ZNF679	2	5	0.074297
chr7	64307459	64354860	64331159	ENSG00000234444.9	+	protein_coding	KNOWN	ZNF736	8	5	-0.086797
chr7	64355078	64356199	64355638	ENSG00000227986.1	+	unprocessed_pseudogene	KNOWN	TRIM60P18	1	2	-0.208875
chr7	64425623	64426334	64425978	ENSG00000276650.1	-	unprocessed_pseudogene	KNOWN	RP11-321E8.8	1	2	-0.191080
chr7	64433830	64434592	64434211	ENSG00000232727.2	+	processed_pseudogene	KNOWN	YWHAEP1	1	1	-0.597221
chr7	64443802	64444742	64444272	ENSG00000223845.1	-	unitary_pseudogene	KNOWN	VN1R40P	1	1	-0.597221
chr7	64469185	64470653	64469919	ENSG00000228014.1	+	processed_pseudogene	KNOWN	ZNF680P1	1	1	-0.387415
chr7	64500825	64501729	64501277	ENSG00000228653.2	+	processed_pseudogene	KNOWN	HNRNPCP7	1	1	-0.223870
chr7	64519884	64563106	64541495	ENSG00000173041.11	-	protein_coding	KNOWN	ZNF680	5	4	-0.189243
chr7	64551498	64552066	64551782	ENSG00000223974.1	+	processed_pseudogene	KNOWN	BNIP3P42	1	1	0.073133
chr7	64566814	64567443	64567128	ENSG00000235349.1	-	processed_pseudogene	KNOWN	RP11-561N12.6	1	2	0.073133
chr7	64569428	64570437	64569932	ENSG00000213642.3	-	processed_pseudogene	KNOWN	RP11-561N12.5	1	1	0.119925
chr7	64582733	64583207	64582970	ENSG00000224669.1	+	processed_pseudogene	KNOWN	RP11-561N12.1	1	1	0.180926
chr7	64590599	64591133	64590866	ENSG00000276475.1	-	processed_pseudogene	KNOWN	RP11-561N12.8	1	1	0.276075
chr7	64666083	64711582	64688832	ENSG00000196247.11	+	protein_coding	KNOWN	ZNF107	6	7	-0.048571
chr7	64678954	64687393	64683173	ENSG00000271550.1	-	processed_pseudogene	KNOWN	BNIP3P11	1	2	-0.046392
chr7	64679064	64679176	64679120	ENSG00000275667.1	+	miRNA	KNOWN	MIR6839	1	1	-0.046392
chr7	64735933	64736743	64736338	ENSG00000224172.1	-	processed_pseudogene	KNOWN	RP11-416N13.1	1	1	0.159896
chr7	64768156	64769101	64768628	ENSG00000277206.1	+	unprocessed_pseudogene	KNOWN	RP11-797H7.6	1	2	-0.104073
chr7	64794388	64833681	64814034	ENSG00000197008.9	+	protein_coding	KNOWN	ZNF138	7	5	-0.091389
chr7	64835280	64836882	64836081	ENSG00000234338.1	-	processed_pseudogene	KNOWN	RP11-797H7.1	1	1	-0.149826
chr7	64852397	64853354	64852875	ENSG00000182722.5	-	processed_pseudogene	KNOWN	SEPHS1P1	1	1	-0.177615
chr7	64862999	64864370	64863684	ENSG00000213640.3	+	processed_pseudogene	KNOWN	EEF1DP4	1	2	-0.177615
chr7	64870172	64930966	64900569	ENSG00000198039.11	+	protein_coding	KNOWN	ZNF273	7	8	0.207256
chr7	64888527	64890100	64889313	ENSG00000189316.3	-	antisense	KNOWN	RP11-797H7.5	1	3	0.279636
chr7	64933273	64933616	64933444	ENSG00000223476.1	+	processed_pseudogene	KNOWN	VN1R42P	1	1	-0.209664
chr7	64942143	64942926	64942534	ENSG00000270948.1	-	processed_pseudogene	KNOWN	RP11-460N20.7	1	1	-0.209664
chr7	64971776	65006684	64989230	ENSG00000152926.14	-	protein_coding	KNOWN	ZNF117	4	4	-0.332247
chr7	64990809	65006743	64998776	ENSG00000213462.4	-	protein_coding	KNOWN	ERV3-1	3	2	-0.008702
chr7	65023204	65023310	65023257	ENSG00000201165.1	-	snRNA	KNOWN	RNU6-1229P	1	1	0.221760
chr7	65038354	65074713	65056533	ENSG00000234585.6	+	transcribed_unprocessed_pseudogene	KNOWN	CCT6P3	3	12	0.120521
chr7	65038372	65038565	65038468	ENSG00000239985.2	+	unprocessed_pseudogene	KNOWN	RP11-460N20.3	1	1	0.246714
chr7	65065999	65066132	65066065	ENSG00000207344.1	+	snoRNA	NOVEL	SNORA22	1	1	0.055696
chr7	65070538	65070672	65070605	ENSG00000207062.1	+	snoRNA	NOVEL	SNORA15	1	1	0.083818
chr7	65075023	65078780	65076901	ENSG00000227113.2	+	unprocessed_pseudogene	KNOWN	RP11-460N20.4	1	2	0.083818
chr7	65084103	65100232	65092167	ENSG00000226002.1	+	unprocessed_pseudogene	KNOWN	GTF2IP14	1	6	0.063459
chr7	65140528	65141723	65141125	ENSG00000280410.1	-	protein_coding	KNOWN	AC104073.2	1	3	-0.088090
chr7	65141225	65234216	65187720	ENSG00000164669.12	+	transcribed_unprocessed_pseudogene	KNOWN	INTS4P1	2	14	-0.131790
chr7	65235790	65236723	65236256	ENSG00000237026.1	-	processed_pseudogene	KNOWN	RP11-328P23.2	1	2	-0.110052
chr7	65247608	65247758	65247683	ENSG00000229064.1	-	processed_pseudogene	KNOWN	RP11-746P2.5	1	1	-0.110052
chr7	65263414	65263509	65263461	ENSG00000265175.1	+	miRNA	NOVEL	AC104073.1	1	1	-0.156921
chr7	65269374	65306238	65287806	ENSG00000282381.1	+	lincRNA	KNOWN	RP11-328P23.4	1	3	-0.020904
chr7	65290429	65292776	65291602	ENSG00000277544.1	+	unprocessed_pseudogene	KNOWN	RP11-746P2.6	1	4	-0.311132
chr7	65326719	65326816	65326767	ENSG00000252102.1	+	snoRNA	NOVEL	SNORA63	1	1	-0.316473
chr7	65327396	65327473	65327434	ENSG00000200130.1	+	snoRNA	NOVEL	SNORA63	1	1	-0.316473
chr7	65335174	65335668	65335421	ENSG00000231556.1	-	processed_pseudogene	KNOWN	RSL24D1P3	1	1	-0.218030
chr7	65355934	65357176	65356555	ENSG00000232906.1	+	processed_pseudogene	KNOWN	RP11-746P2.3	1	1	-0.315666
chr7	65373799	65401135	65387467	ENSG00000146757.13	+	protein_coding	KNOWN	ZNF92	5	4	0.128361
chr7	65463071	65463438	65463254	ENSG00000238124.1	+	lincRNA	KNOWN	RP11-667F9.2	1	2	0.061295
chr7	65508773	65508944	65508858	ENSG00000226767.1	-	processed_pseudogene	KNOWN	RP11-328P23.3	1	1	-0.327233
chr7	65525629	65554744	65540186	ENSG00000235421.1	-	unprocessed_pseudogene	KNOWN	RP11-667F9.1	1	4	-0.350319
chr7	65554258	65555459	65554858	ENSG00000280427.1	+	protein_coding	KNOWN	AC104057.1	1	4	-0.303493
chr7	65617077	65619214	65618145	ENSG00000230386.4	+	unprocessed_pseudogene	KNOWN	RP13-157F18.2	1	3	-0.218030
chr7	65647010	65770810	65708910	ENSG00000272693.3	-	lincRNA	KNOWN	RP11-479O9.4	2	8	-0.009820
chr7	65647864	65715661	65681762	ENSG00000273024.5	+	transcribed_unprocessed_pseudogene	KNOWN	INTS4P2	2	11	-0.203882
chr7	65751142	65763354	65757248	ENSG00000228409.5	+	transcribed_unprocessed_pseudogene	KNOWN	CCT6P1	3	14	0.280258
chr7	65755526	65755659	65755592	ENSG00000206634.1	+	snoRNA	KNOWN	SNORA22	1	1	0.280258
chr7	65760052	65760186	65760119	ENSG00000206785.1	+	snoRNA	NOVEL	SNORA15	1	1	0.280258
chr7	65764535	65768306	65766420	ENSG00000275833.1	+	unprocessed_pseudogene	KNOWN	RP11-479O9.3	1	2	0.280258
chr7	65773620	65802067	65787843	ENSG00000224316.1	+	unprocessed_pseudogene	KNOWN	GTF2IP5	1	7	0.072270
chr7	65814672	65814775	65814723	ENSG00000200670.1	+	snRNA	KNOWN	RNU6-912P	1	1	0.175408
chr7	65840212	65840596	65840404	ENSG00000236529.1	+	processed_pseudogene	KNOWN	RP13-254B10.1	1	1	0.106206
chr7	65859660	65859766	65859713	ENSG00000201560.1	-	snRNA	KNOWN	RNU6-973P	1	1	0.155807
chr7	65873267	65959563	65916415	ENSG00000196715.5	+	protein_coding	KNOWN	VKORC1L1	2	3	0.119788
chr7	65960684	65982314	65971499	ENSG00000169919.16	-	protein_coding	KNOWN	GUSB	14	12	0.462010
chr7	66004017	66004137	66004077	ENSG00000224365.1	+	processed_pseudogene	KNOWN	RP11-252P18.1	1	1	0.421299
chr7	66025126	66031544	66028335	ENSG00000229886.1	-	processed_pseudogene	KNOWN	RP5-1132H15.3	1	3	0.070771
chr7	66056234	66056318	66056276	ENSG00000252997.1	-	miRNA	NOVEL	AC068533.1	1	1	0.467329
chr7	66070904	66071318	66071111	ENSG00000205596.4	-	processed_pseudogene	KNOWN	RP5-1132H15.2	1	1	0.607533
chr7	66075798	66093558	66084678	ENSG00000126522.16	+	protein_coding	KNOWN	ASL	10	17	0.628516
chr7	66087761	66152277	66120019	ENSG00000249319.2	+	protein_coding	KNOWN	AC068533.7	1	12	0.639732
chr7	66114604	66154568	66134586	ENSG00000241258.6	+	protein_coding	KNOWN	CRCP	7	7	0.576257
chr7	66119603	66165011	66142307	ENSG00000234185.2	-	antisense	KNOWN	RP5-1132H15.1	1	4	0.507620
chr7	66205199	66420543	66312871	ENSG00000169902.13	+	protein_coding	KNOWN	TPST1	5	6	0.308528
chr7	66344303	66344414	66344358	ENSG00000252126.2	+	snRNA	KNOWN	RNU6-313P	1	1	0.251988
chr7	66376044	66401338	66388691	ENSG00000179406.6	-	lincRNA	KNOWN	LINC00174	4	7	0.623941
chr7	66395191	66395286	66395238	ENSG00000222364.1	+	snRNA	KNOWN	RNU6-96P	1	1	0.456403
chr7	66407288	66409239	66408263	ENSG00000251451.1	-	unprocessed_pseudogene	KNOWN	GTF2IP9	1	3	0.456403
chr7	66409143	66490059	66449601	ENSG00000230189.6	-	transcribed_unprocessed_pseudogene	KNOWN	GS1-124K5.2	3	12	0.302287
chr7	66423405	66423893	66423649	ENSG00000231234.2	-	processed_pseudogene	KNOWN	SKP1P1	1	1	0.339919
chr7	66434634	66435154	66434894	ENSG00000236928.3	-	processed_pseudogene	KNOWN	RP11-792A8.1	1	1	0.444152
chr7	66474556	66475749	66475152	ENSG00000279785.1	+	TEC	KNOWN	GS1-124K5.13	1	1	0.060628
chr7	66482801	66490108	66486454	ENSG00000244510.1	-	unprocessed_pseudogene	KNOWN	GS1-124K5.7	1	2	0.064483
chr7	66485095	66486532	66485813	ENSG00000244657.1	-	unprocessed_pseudogene	KNOWN	GS1-124K5.8	1	2	0.060628
chr7	66491049	66493566	66492307	ENSG00000223473.2	-	lincRNA	KNOWN	GS1-124K5.3	2	2	0.319061
chr7	66493706	66495474	66494590	ENSG00000237310.1	+	lincRNA	KNOWN	GS1-124K5.4	2	2	0.319061
chr7	66505155	66506223	66505689	ENSG00000179342.4	-	processed_pseudogene	KNOWN	GS1-124K5.9	1	1	0.319061
chr7	66511556	66545066	66528311	ENSG00000234500.1	+	unprocessed_pseudogene	KNOWN	GS1-124K5.10	1	8	0.726846
chr7	66526088	66542624	66534356	ENSG00000229180.5	-	lincRNA	KNOWN	GS1-124K5.11	2	3	0.742611
chr7	66553805	66554199	66554002	ENSG00000275400.1	-	processed_pseudogene	KNOWN	RP4-756H11.5	1	1	0.894431
chr7	66554588	66576923	66565755	ENSG00000232559.3	-	unprocessed_pseudogene	KNOWN	GS1-124K5.12	1	3	0.717104
chr7	66556216	66557065	66556640	ENSG00000232491.1	+	processed_pseudogene	KNOWN	SAPCD2P3	1	1	0.894431
chr7	66556889	66557362	66557125	ENSG00000177418.2	-	processed_pseudogene	KNOWN	RP4-756H11.4	1	1	0.894431
chr7	66606738	66607107	66606922	ENSG00000225573.4	-	processed_pseudogene	KNOWN	RPL35P5	1	1	0.417019
chr7	66628881	66811187	66720034	ENSG00000243335.8	+	protein_coding	KNOWN	KCTD7	4	13	0.490900
chr7	66654538	66669855	66662196	ENSG00000226824.6	+	sense_intronic	KNOWN	RP4-756H11.3	3	4	0.492079
chr7	66682164	66811464	66746814	ENSG00000154710.15	+	protein_coding	KNOWN	RABGEF1	10	10	0.430658
chr7	66739829	66740385	66740107	ENSG00000272831.1	-	antisense	KNOWN	RP11-792A8.4	1	1	0.534214
chr7	66748838	66749077	66748957	ENSG00000271064.1	-	processed_pseudogene	KNOWN	RP11-792A8.3	1	1	0.534214
chr7	66809993	66844826	66827409	ENSG00000230583.6	-	transcribed_unprocessed_pseudogene	KNOWN	GTF2IRD1P1	2	11	0.582732
chr7	66848496	66858136	66853316	ENSG00000232546.1	+	unprocessed_pseudogene	KNOWN	RP11-458F8.1	1	4	0.450830
chr7	66880708	66882981	66881844	ENSG00000230295.1	+	unprocessed_pseudogene	KNOWN	GTF2IP23	1	3	0.446423
chr7	66891188	66891291	66891239	ENSG00000212568.1	+	snRNA	KNOWN	RNU6-1254P	1	1	0.406266
chr7	66902857	66906297	66904577	ENSG00000273142.1	+	lincRNA	KNOWN	RP11-458F8.4	1	1	0.406266
chr7	66914581	66914943	66914762	ENSG00000179131.7	+	processed_pseudogene	KNOWN	RP11-458F8.3	1	1	0.479015
chr7	66915063	66915334	66915198	ENSG00000274135.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.479015
chr7	66921225	66958551	66939888	ENSG00000106609.16	+	protein_coding	KNOWN	TMEM248	7	7	0.235487
chr7	66980120	66980410	66980265	ENSG00000275878.1	+	misc_RNA	KNOWN	RN7SL43P	1	1	0.543501
chr7	66980335	66980409	66980372	ENSG00000280772.1	+	miRNA	NOVEL	AC079920.1	1	1	0.543501
chr7	66987677	66995601	66991639	ENSG00000126524.9	-	protein_coding	KNOWN	SBDS	5	6	0.413054
chr7	66995173	67239519	67117346	ENSG00000198874.12	+	protein_coding	KNOWN	TYW1	7	16	0.152554
chr7	67089257	67089470	67089363	ENSG00000233383.1	-	processed_pseudogene	KNOWN	RP11-324F21.1	1	1	0.083954
chr7	67114322	67114397	67114359	ENSG00000266525.1	-	miRNA	KNOWN	MIR4650-1	1	1	-0.117931
chr7	67139071	67139170	67139120	ENSG00000265024.1	-	miRNA	NOVEL	AC073089.1	1	1	0.184603
chr7	67279778	67286230	67283004	ENSG00000230358.3	+	unprocessed_pseudogene	KNOWN	SPDYE21P	1	5	0.593965
chr7	67295608	67302907	67299257	ENSG00000067601.7	-	transcribed_unprocessed_pseudogene	KNOWN	PMS2P4	2	5	0.508916
chr7	67297653	67297754	67297703	ENSG00000201565.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.508916
chr7	67302621	67321526	67312073	ENSG00000106610.14	+	transcribed_unprocessed_pseudogene	KNOWN	STAG3L4	3	5	0.461860
chr7	67307605	67308356	67307980	ENSG00000228019.1	-	unprocessed_pseudogene	KNOWN	RP11-166O4.4	1	2	0.508916
chr7	67333047	67334383	67333715	ENSG00000273448.1	+	lincRNA	KNOWN	RP11-166O4.6	1	1	-0.236845
chr7	67335976	67340024	67338000	ENSG00000235475.1	+	lincRNA	KNOWN	LINC01372	1	3	-0.236845
chr7	67356680	67356779	67356729	ENSG00000265600.1	+	miRNA	NOVEL	AC006480.1	1	1	0.170466
chr7	67627831	67628019	67627925	ENSG00000226392.1	+	unprocessed_pseudogene	KNOWN	RP4-736H5.1	1	1	0.157209
chr7	67628022	67628349	67628185	ENSG00000237466.1	+	unprocessed_pseudogene	KNOWN	RP4-736H5.2	1	1	0.157209
chr7	67691058	67697029	67694043	ENSG00000233423.1	-	lincRNA	KNOWN	RP4-736H5.3	1	2	0.167444
chr7	67769629	67770468	67770048	ENSG00000223948.1	-	processed_pseudogene	KNOWN	RP11-421N10.1	1	2	0.123446
chr7	68020253	68032690	68026471	ENSG00000225209.1	+	lincRNA	KNOWN	RP11-358M3.1	1	6	0.030674
chr7	68091223	68119209	68105216	ENSG00000236531.2	+	lincRNA	KNOWN	RP5-945F2.2	1	2	0.027560
chr7	68097737	68098250	68097993	ENSG00000232975.1	+	unprocessed_pseudogene	KNOWN	RP5-945F2.1	1	2	-0.040763
chr7	68150283	68288233	68219258	ENSG00000226829.1	-	lincRNA	KNOWN	RP5-945F2.3	1	5	-0.090623
chr7	68241637	68242267	68241952	ENSG00000237754.1	+	processed_pseudogene	KNOWN	RP11-521C10.1	1	1	0.058633
chr7	68266319	68266859	68266589	ENSG00000225959.1	-	unprocessed_pseudogene	KNOWN	MTND4P3	1	1	-0.257457
chr7	68405619	68405723	68405671	ENSG00000276921.1	-	miRNA	NOVEL	AC025540.1	1	1	-0.428482
chr7	68640798	68641584	68641191	ENSG00000228429.1	+	processed_pseudogene	KNOWN	RP5-859M6.1	1	1	-0.048016
chr7	68723911	68724048	68723979	ENSG00000222428.1	-	rRNA	KNOWN	RNA5SP231	1	1	-0.088580
chr7	69040152	69046803	69043477	ENSG00000233689.1	+	lincRNA	KNOWN	RP11-123O1.1	1	3	-0.200189
chr7	69125270	69125376	69125323	ENSG00000200189.1	+	snRNA	KNOWN	RNU6-832P	1	1	-0.418203
chr7	69187833	69189318	69188575	ENSG00000236839.1	-	lincRNA	KNOWN	RP11-3P22.1	1	3	-0.123737
chr7	69190141	69190224	69190182	ENSG00000265655.1	-	miRNA	NOVEL	AC069280.1	1	1	0.016264
chr7	69224696	69430923	69327809	ENSG00000225718.1	-	lincRNA	KNOWN	RP11-3P22.2	3	3	-0.003628
chr7	69330698	69331378	69331038	ENSG00000230654.1	-	unprocessed_pseudogene	KNOWN	RP11-666G4.2	1	1	-0.198401
chr7	69331835	69333633	69332734	ENSG00000229031.1	-	unprocessed_pseudogene	KNOWN	RP11-666G4.1	1	1	-0.198401
chr7	69401202	69401303	69401252	ENSG00000252423.1	-	snRNA	KNOWN	RNU6-229P	1	1	-0.156829
chr7	69507510	69507622	69507566	ENSG00000200857.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.108111
chr7	69595958	69597448	69596703	ENSG00000234215.2	-	lincRNA	KNOWN	RP5-942I16.1	1	2	-0.021219
chr7	69598919	70793068	70195993	ENSG00000158321.15	+	protein_coding	KNOWN	AUTS2	18	19	-0.270902
chr7	70837738	70838013	70837875	ENSG00000236978.1	+	processed_pseudogene	KNOWN	RP11-575M4.1	1	1	-0.117236
chr7	70882405	70882540	70882472	ENSG00000281437.1	-	miRNA	NOVEL	AC073873.1	1	1	-0.074827
chr7	71132169	71713600	71422884	ENSG00000185274.11	+	protein_coding	KNOWN	WBSCR17	5	11	-0.061959
chr7	71306592	71306698	71306645	ENSG00000277487.1	+	miRNA	NOVEL	AC079398.3	1	1	-0.026886
chr7	71307672	71307770	71307721	ENSG00000265878.2	-	miRNA	KNOWN	MIR3914-2	1	1	-0.026886
chr7	71310459	71310551	71310505	ENSG00000266688.1	-	miRNA	NOVEL	AC079398.1	1	1	-0.340019
chr7	71328207	71328303	71328255	ENSG00000275687.1	-	miRNA	NOVEL	AC079398.2	1	1	-0.340019
chr7	71617332	71617439	71617385	ENSG00000257902.2	-	miRNA	NOVEL	AC073330.1	1	1	-0.154169
chr7	71685452	71685747	71685599	ENSG00000199940.1	-	misc_RNA	KNOWN	RN7SKP75	1	1	-0.123986
chr7	71779491	72447151	72113321	ENSG00000183166.10	-	protein_coding	KNOWN	CALN1	6	7	-0.099714
chr7	71913738	71913856	71913797	ENSG00000201014.1	-	rRNA	KNOWN	RNA5SP232	1	1	-0.549554
chr7	71942259	71942468	71942363	ENSG00000235581.1	+	processed_pseudogene	KNOWN	GS1-111G14.1	1	1	-0.152860
chr7	72103181	72104209	72103695	ENSG00000228769.1	+	unprocessed_pseudogene	KNOWN	ABCF2P2	1	2	-0.448577
chr7	72558744	72828198	72693471	ENSG00000277149.4	-	protein_coding	KNOWN	TYW1B	3	14	-0.037793
chr7	72673068	72673167	72673117	ENSG00000266772.1	+	miRNA	NOVEL	AC211469.1	1	1	-0.266056
chr7	72697903	72697978	72697940	ENSG00000264494.1	+	miRNA	KNOWN	MIR4650-2	1	1	0.003554
chr7	72722885	72723089	72722987	ENSG00000270694.1	+	processed_pseudogene	KNOWN	RP11-535E8.2	1	1	0.256111
chr7	72768798	72769191	72768994	ENSG00000270555.1	+	processed_pseudogene	KNOWN	RP11-1394O16.1	1	1	-0.126507
chr7	72822894	72823171	72823032	ENSG00000266569.2	-	misc_RNA	KNOWN	RN7SL377P	1	1	0.319402
chr7	72829425	72836701	72833063	ENSG00000225648.5	+	transcribed_unprocessed_pseudogene	KNOWN	SBDSP1	5	5	0.225560
chr7	72841437	72841727	72841582	ENSG00000274656.1	-	misc_RNA	KNOWN	RN7SL625P	1	1	0.217523
chr7	72862757	72870510	72866633	ENSG00000179994.10	-	transcribed_unprocessed_pseudogene	KNOWN	SPDYE7P	2	6	0.281819
chr7	72879365	72951440	72915402	ENSG00000196313.11	+	protein_coding	KNOWN	POM121	5	16	0.498655
chr7	72924418	72925125	72924771	ENSG00000272843.1	-	antisense	KNOWN	RP11-313P13.5	1	1	0.649818
chr7	72947581	72954790	72951185	ENSG00000106133.17	-	transcribed_unprocessed_pseudogene	KNOWN	NSUN5P2	5	12	0.653158
chr7	72959485	72969466	72964475	ENSG00000155428.12	-	protein_coding	KNOWN	TRIM74	2	5	0.864363
chr7	72969696	73005922	72987809	ENSG00000174353.17	-	transcribed_unprocessed_pseudogene	KNOWN	STAG3L3	6	8	0.782003
chr7	72969814	72971727	72970770	ENSG00000205584.6	+	unprocessed_pseudogene	KNOWN	AC005488.11	1	4	0.845349
chr7	72983360	72983461	72983410	ENSG00000276178.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.843313
chr7	73005541	73021103	73013322	ENSG00000229018.5	+	unprocessed_pseudogene	KNOWN	PMS2P7	1	7	0.583675
chr7	73011144	73011245	73011194	ENSG00000201282.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.535598
chr7	73020338	73029766	73025052	ENSG00000273520.4	-	transcribed_unprocessed_pseudogene	KNOWN	SPDYE8P	2	8	0.535598
chr7	73037371	73049246	73043308	ENSG00000273897.1	+	unprocessed_pseudogene	KNOWN	CH17-264B6.4	1	6	0.367934
chr7	73039085	73039186	73039135	ENSG00000273927.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.367934
chr7	73048055	73057911	73052983	ENSG00000275976.4	-	transcribed_unprocessed_pseudogene	KNOWN	SPDYE11	3	8	0.592793
chr7	73065529	73077353	73071441	ENSG00000277125.1	+	unprocessed_pseudogene	KNOWN	CH17-264B6.3	1	6	0.541066
chr7	73067231	73067332	73067281	ENSG00000274984.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.648042
chr7	73068571	73068634	73068602	ENSG00000273626.1	-	miRNA	NOVEL	AC211476.1	1	1	0.648042
chr7	73076165	73086038	73081101	ENSG00000262461.5	-	transcribed_unprocessed_pseudogene	KNOWN	SPDYE9P	3	8	0.476042
chr7	73093657	73105389	73099523	ENSG00000174384.9	+	unprocessed_pseudogene	KNOWN	RP11-313P13.4	1	6	0.665857
chr7	73095357	73095458	73095407	ENSG00000199913.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.665857
chr7	73104201	73111140	73107670	ENSG00000274570.4	-	transcribed_unprocessed_pseudogene	KNOWN	SPDYE10P	2	5	0.670687
chr7	73154938	73207283	73181110	ENSG00000233369.7	+	transcribed_processed_pseudogene	KNOWN	GTF2IP4	2	24	0.568342
chr7	73187969	73188736	73188352	ENSG00000233523.1	-	processed_pseudogene	KNOWN	PHBP5	1	1	0.368202
chr7	73220624	73235945	73228284	ENSG00000182487.12	+	transcribed_unprocessed_pseudogene	KNOWN	NCF1B	3	11	0.554034
chr7	73242751	73280119	73261435	ENSG00000214544.7	-	transcribed_unprocessed_pseudogene	KNOWN	GTF2IRD2P1	3	14	0.695975
chr7	73293497	73301161	73297329	ENSG00000205578.5	+	unprocessed_pseudogene	KNOWN	POM121B	1	8	0.691454
chr7	73302517	73308867	73305692	ENSG00000130305.16	-	protein_coding	KNOWN	NSUN5	7	10	0.691454
chr7	73312539	73328082	73320310	ENSG00000146755.10	-	protein_coding	KNOWN	TRIM50	4	7	0.777427
chr7	73314107	73315213	73314660	ENSG00000225005.1	+	processed_pseudogene	KNOWN	RP11-483G21.3	1	1	0.777427
chr7	73328164	73358637	73343400	ENSG00000077800.11	+	protein_coding	KNOWN	FKBP6	7	9	0.652621
chr7	73339094	73339200	73339147	ENSG00000206709.1	-	snRNA	KNOWN	RNU6-1080P	1	1	0.707562
chr7	73403788	73403889	73403838	ENSG00000202035.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.233464
chr7	73433783	73436120	73434951	ENSG00000188763.4	+	protein_coding	KNOWN	FZD9	1	1	0.664881
chr7	73440398	73522278	73481338	ENSG00000009954.10	-	protein_coding	KNOWN	BAZ1B	3	20	0.501392
chr7	73507208	73507274	73507241	ENSG00000252713.1	+	snRNA	KNOWN	RNU6-1198P	1	1	0.474461
chr7	73536356	73558002	73547179	ENSG00000106635.7	-	protein_coding	KNOWN	BCL7B	14	7	0.592323
chr7	73568932	73578791	73573861	ENSG00000106638.15	-	protein_coding	KNOWN	TBL2	22	8	0.696587
chr7	73593194	73624543	73608868	ENSG00000009950.15	-	protein_coding	KNOWN	MLXIPL	11	17	0.642654
chr7	73609262	73611502	73610382	ENSG00000274080.1	-	sense_intronic	KNOWN	CTA-315H11.2	1	1	0.700503
chr7	73667825	73672112	73669968	ENSG00000176428.5	+	protein_coding	KNOWN	VPS37D	2	4	0.725500
chr7	73680969	73683453	73682211	ENSG00000176410.7	-	protein_coding	KNOWN	DNAJC30	1	1	0.870477
chr7	73683025	73705161	73694093	ENSG00000071462.11	+	protein_coding	KNOWN	WBSCR22	18	13	0.874824
chr7	73699206	73719672	73709439	ENSG00000106089.11	-	protein_coding	KNOWN	STX1A	14	10	0.852555
chr7	73711317	73711397	73711357	ENSG00000265724.1	+	miRNA	KNOWN	MIR4284	1	1	0.825477
chr7	73732569	73732868	73732718	ENSG00000241709.3	-	misc_RNA	KNOWN	RN7SL265P	1	1	0.860484
chr7	73735038	73736054	73735546	ENSG00000225969.1	+	antisense	KNOWN	ABHD11-AS1	1	4	0.860484
chr7	73736094	73738867	73737480	ENSG00000106077.18	-	protein_coding	KNOWN	ABHD11	14	6	0.860484
chr7	73768997	73770270	73769633	ENSG00000165215.6	-	protein_coding	KNOWN	CLDN3	1	1	0.417137
chr7	73799542	73832693	73816117	ENSG00000189143.9	+	protein_coding	KNOWN	CLDN4	5	4	0.476339
chr7	73834590	73842535	73838562	ENSG00000165171.10	-	protein_coding	KNOWN	WBSCR27	3	6	0.730031
chr7	73861159	73865893	73863526	ENSG00000175877.3	+	protein_coding	KNOWN	WBSCR28	2	4	0.840229
chr7	73985992	73988767	73987379	ENSG00000261467.2	+	lincRNA	KNOWN	RP11-731K22.1	1	1	0.719080
chr7	74027789	74069907	74048848	ENSG00000049540.16	+	protein_coding	KNOWN	ELN	34	34	0.661303
chr7	74059576	74062284	74060930	ENSG00000232415.1	-	antisense	KNOWN	CTB-51J22.1	1	2	0.690325
chr7	74082933	74122525	74102729	ENSG00000106683.14	+	protein_coding	KNOWN	LIMK1	8	16	0.940236
chr7	74174245	74197101	74185673	ENSG00000106682.14	+	protein_coding	KNOWN	EIF4H	5	7	0.432876
chr7	74191198	74191294	74191246	ENSG00000207741.1	+	miRNA	KNOWN	MIR590	1	1	0.663755
chr7	74199652	74229834	74214743	ENSG00000086730.16	+	protein_coding	KNOWN	LAT2	11	14	0.753168
chr7	74231499	74254458	74242978	ENSG00000049541.10	-	protein_coding	KNOWN	RFC2	13	11	0.963953
chr7	74289475	74405943	74347709	ENSG00000106665.15	+	protein_coding	KNOWN	CLIP2	9	17	0.840727
chr7	74453790	74602604	74528197	ENSG00000006704.10	+	protein_coding	KNOWN	GTF2IRD1	7	27	0.803340
chr7	74486691	74486955	74486823	ENSG00000280743.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.837728
chr7	74487428	74487540	74487484	ENSG00000238391.1	-	rRNA	KNOWN	RNA5SP233	1	1	0.837728
chr7	74606913	74607299	74607106	ENSG00000273069.1	+	lincRNA	KNOWN	RP5-1186P10.2	1	1	0.640885
chr7	74633510	74633884	74633697	ENSG00000279005.1	-	TEC	KNOWN	RP5-1186P10.1	1	1	0.554964
chr7	74657667	74760692	74709179	ENSG00000263001.5	+	protein_coding	KNOWN	GTF2I	21	35	0.452678
chr7	74688939	74729001	74708970	ENSG00000232729.7	-	processed_transcript	KNOWN	AC083884.8	6	4	0.520922
chr7	74741457	74742121	74741789	ENSG00000262648.1	-	processed_pseudogene	KNOWN	PHBP15	1	1	0.004085
chr7	74773962	74789315	74781638	ENSG00000158517.13	+	protein_coding	KNOWN	NCF1	11	11	0.771049
chr7	74796144	74851551	74823847	ENSG00000196275.13	-	protein_coding	KNOWN	GTF2IRD2	7	17	0.540028
chr7	74882163	74890610	74886386	ENSG00000277072.4	-	transcribed_unprocessed_pseudogene	KNOWN	STAG3L2	5	9	0.646638
chr7	74894116	74897835	74895975	ENSG00000123965.13	+	unprocessed_pseudogene	KNOWN	PMS2P5	1	4	0.515067
chr7	74895816	74895917	74895866	ENSG00000239069.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.515067
chr7	74906673	74913256	74909964	ENSG00000184616.8	-	unprocessed_pseudogene	KNOWN	SPDYE12P	1	6	0.479092
chr7	74964818	75024798	74994808	ENSG00000274070.1	+	protein_coding	KNOWN	GATSL2	2	9	0.912001
chr7	75027122	75074228	75050675	ENSG00000274523.4	-	protein_coding	KNOWN	WBSCR16	6	11	0.892945
chr7	75057877	75058188	75058032	ENSG00000277127.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.916043
chr7	75092573	75149817	75121195	ENSG00000174428.16	+	protein_coding	KNOWN	GTF2IRD2B	10	17	0.534140
chr7	75156639	75172044	75164341	ENSG00000165178.9	-	unprocessed_pseudogene	KNOWN	NCF1C	1	11	0.760190
chr7	75185385	75237696	75211540	ENSG00000277053.4	-	transcribed_unprocessed_pseudogene	KNOWN	GTF2IP1	10	24	0.622939
chr7	75203926	75204711	75204318	ENSG00000276592.1	+	processed_pseudogene	KNOWN	PHBP6	1	1	0.741305
chr7	75225433	75234310	75229871	ENSG00000277675.1	+	antisense	KNOWN	AC004878.2	1	3	0.558953
chr7	75232928	75233924	75233426	ENSG00000263081.1	+	antisense	KNOWN	AC004878.8	1	2	0.756389
chr7	75237293	75237405	75237349	ENSG00000275121.1	-	processed_pseudogene	KNOWN	CH17-232I21.1	1	1	0.756389
chr7	75281267	75287118	75284192	ENSG00000274959.1	+	unprocessed_pseudogene	KNOWN	SPDYE13P	1	7	0.652707
chr7	75288120	75299795	75293957	ENSG00000276840.1	-	unprocessed_pseudogene	KNOWN	PMS2P10	1	5	0.525950
chr7	75297990	75298091	75298040	ENSG00000267828.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.501636
chr7	75309144	75315046	75312095	ENSG00000278807.1	+	unprocessed_pseudogene	KNOWN	SPDYE14P	1	6	0.387261
chr7	75316048	75327765	75321906	ENSG00000273598.1	-	unprocessed_pseudogene	KNOWN	PMS2P6	1	5	0.367885
chr7	75325959	75326060	75326009	ENSG00000202021.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.367885
chr7	75337162	75343013	75340087	ENSG00000278080.1	+	unprocessed_pseudogene	KNOWN	SPDYE15P	1	7	0.485656
chr7	75344015	75359550	75351782	ENSG00000278416.1	-	unprocessed_pseudogene	KNOWN	PMS2P2	1	7	0.503220
chr7	75353885	75353986	75353935	ENSG00000199870.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.514225
chr7	75359194	75395383	75377288	ENSG00000205583.13	+	transcribed_unprocessed_pseudogene	KNOWN	STAG3L1	4	9	0.691991
chr7	75381638	75381739	75381688	ENSG00000275930.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.719018
chr7	75391955	75395434	75393694	ENSG00000146722.11	-	transcribed_unprocessed_pseudogene	KNOWN	AC006014.8	2	5	0.948346
chr7	75395063	75410996	75403029	ENSG00000178809.11	+	protein_coding	KNOWN	TRIM73	7	7	0.935120
chr7	75410322	75416787	75413554	ENSG00000223705.9	+	transcribed_unprocessed_pseudogene	KNOWN	NSUN5P1	8	11	0.736979
chr7	75416787	75486271	75451529	ENSG00000272391.5	-	protein_coding	KNOWN	POM121C	8	15	0.506397
chr7	75474707	75486108	75480407	ENSG00000242073.2	-	transcribed_unprocessed_pseudogene	KNOWN	AC006014.7	1	4	0.401589
chr7	75493625	75504304	75498964	ENSG00000170092.14	+	protein_coding	KNOWN	SPDYE5	3	8	0.363502
chr7	75502930	75528148	75515539	ENSG00000127957.16	-	transcribed_unprocessed_pseudogene	KNOWN	PMS2P3	8	10	0.286891
chr7	75513025	75513126	75513075	ENSG00000200874.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.257051
chr7	75533300	75738962	75636131	ENSG00000127946.16	-	protein_coding	KNOWN	HIP1	7	31	0.606721
chr7	75625089	75626970	75626029	ENSG00000279996.1	-	TEC	KNOWN	CTB-139P11.2	1	1	0.704969
chr7	75769533	75789896	75779714	ENSG00000006606.8	-	protein_coding	KNOWN	CCL26	2	4	0.808373
chr7	75811665	75823356	75817510	ENSG00000106178.6	-	protein_coding	KNOWN	CCL24	2	4	0.364195
chr7	75835663	75836141	75835902	ENSG00000219039.2	+	processed_pseudogene	KNOWN	AC005102.1	1	1	0.404779
chr7	75842602	75888926	75865764	ENSG00000005486.16	+	protein_coding	KNOWN	RHBDD2	9	5	0.599803
chr7	75899200	75986855	75943027	ENSG00000127948.13	+	protein_coding	KNOWN	POR	24	16	0.721057
chr7	75915197	75915269	75915233	ENSG00000265020.1	+	miRNA	KNOWN	MIR4651	1	1	0.826895
chr7	75922755	75923443	75923099	ENSG00000235090.1	+	processed_pseudogene	KNOWN	RPL7L1P3	1	1	0.826895
chr7	75943782	75943916	75943849	ENSG00000201643.1	+	snoRNA	KNOWN	SNORA14A	1	1	0.641330
chr7	75986837	75994659	75990748	ENSG00000189077.10	-	protein_coding	KNOWN	TMEM120A	15	12	0.806097
chr7	75996338	76048004	76022171	ENSG00000127952.16	-	protein_coding	KNOWN	STYXL1	11	9	0.695373
chr7	76043977	76045963	76044970	ENSG00000280388.1	-	TEC	KNOWN	RP11-229D13.3	1	1	0.552181
chr7	76048051	76067508	76057779	ENSG00000146701.11	+	protein_coding	KNOWN	MDH2	8	9	0.655122
chr7	76071469	76074963	76073216	ENSG00000230882.1	-	processed_pseudogene	KNOWN	AC005077.14	1	1	0.573960
chr7	76087444	76087547	76087495	ENSG00000251798.1	+	snRNA	KNOWN	RNU6-863P	1	1	0.573960
chr7	76090431	76108779	76099605	ENSG00000227038.2	-	transcribed_unprocessed_pseudogene	KNOWN	GTF2IP7	2	6	0.308125
chr7	76108434	76108763	76108598	ENSG00000241778.1	-	unprocessed_pseudogene	KNOWN	AC005077.9	1	2	0.308125
chr7	76113026	76113400	76113213	ENSG00000213549.3	-	processed_pseudogene	KNOWN	AC005077.8	1	1	0.531615
chr7	76117725	76132187	76124956	ENSG00000224273.1	-	unprocessed_pseudogene	KNOWN	AC005077.7	1	4	0.452015
chr7	76173733	76177205	76175469	ENSG00000228829.1	+	transcribed_unprocessed_pseudogene	KNOWN	AC005077.5	2	3	0.531615
chr7	76201900	76287288	76244594	ENSG00000177679.15	+	protein_coding	KNOWN	SRRM3	5	15	0.561778
chr7	76302544	76304295	76303419	ENSG00000106211.8	+	protein_coding	KNOWN	HSPB1	3	3	0.882538
chr7	76326794	76359031	76342912	ENSG00000170027.6	-	protein_coding	KNOWN	YWHAG	1	2	0.487227
chr7	76361768	76362113	76361940	ENSG00000213548.3	+	processed_pseudogene	KNOWN	AC005522.6	1	1	0.467859
chr7	76389334	76409695	76399514	ENSG00000146700.8	-	protein_coding	KNOWN	SSC4D	2	11	0.669770
chr7	76397518	76442071	76419794	ENSG00000188372.14	+	protein_coding	KNOWN	ZP3	7	9	0.616023
chr7	76461676	76505995	76483835	ENSG00000091073.19	+	protein_coding	KNOWN	DTX2	21	12	0.542609
chr7	76470162	76471058	76470610	ENSG00000233980.1	-	processed_pseudogene	KNOWN	FDPSP2	1	1	0.249783
chr7	76474587	76478856	76476721	ENSG00000250614.1	-	antisense	KNOWN	AC007078.4	1	2	0.249783
chr7	76510428	76516521	76513474	ENSG00000243566.6	+	protein_coding	KNOWN	UPK3B	5	6	0.757328
chr7	76521611	76522074	76521842	ENSG00000250778.1	+	unprocessed_pseudogene	KNOWN	AC004980.8	1	2	0.757328
chr7	76523605	76523706	76523655	ENSG00000238560.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.757328
chr7	76524515	76532692	76528603	ENSG00000230305.2	+	unprocessed_pseudogene	KNOWN	AC004980.9	1	3	0.713887
chr7	76531319	76541459	76536389	ENSG00000185040.13	-	protein_coding	KNOWN	SPDYE16	3	7	0.625424
chr7	76549360	76627982	76588671	ENSG00000205485.13	+	transcribed_unprocessed_pseudogene	KNOWN	AC004980.7	4	4	0.207160
chr7	76609986	76627261	76618623	ENSG00000146707.14	-	protein_coding	KNOWN	POMZP3	5	8	0.772028
chr7	76650401	76650897	76650649	ENSG00000214243.3	-	processed_pseudogene	KNOWN	AC004980.10	1	1	0.191527
chr7	76697502	76697654	76697578	ENSG00000221249.1	-	miRNA	NOVEL	AC004980.1	1	1	-0.761460
chr7	76902491	76919191	76910841	ENSG00000231183.3	+	processed_transcript	KNOWN	AC007003.1	2	2	-0.352782
chr7	76968197	76969250	76968723	ENSG00000231087.2	-	processed_pseudogene	KNOWN	FDPSP7	1	1	-0.048016
chr7	76968346	76968518	76968432	ENSG00000236280.1	+	processed_pseudogene	KNOWN	AC114737.3	1	1	-0.048016
chr7	76972679	76976961	76974820	ENSG00000225703.1	-	lincRNA	KNOWN	AC005522.7	1	2	0.392037
chr7	76978617	77004308	76991462	ENSG00000186704.9	+	transcribed_unprocessed_pseudogene	KNOWN	DTX2P1	1	8	0.534327
chr7	76980949	77043775	77012362	ENSG00000265479.5	+	processed_transcript	KNOWN	DTX2P1-UPK3BP1-PMS2P11	2	11	0.636418
chr7	77004662	77005774	77005218	ENSG00000242435.1	+	transcribed_unprocessed_pseudogene	KNOWN	UPK3BP1	1	2	0.647511
chr7	77011551	77015853	77013702	ENSG00000241350.1	+	transcribed_unprocessed_pseudogene	KNOWN	PMS2P11	1	5	0.611601
chr7	77013583	77013684	77013633	ENSG00000201885.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.611601
chr7	77024691	77030572	77027631	ENSG00000186645.7	-	unprocessed_pseudogene	KNOWN	SPDYE17	1	6	0.631602
chr7	77039944	77043776	77041860	ENSG00000233448.2	+	transcribed_unprocessed_pseudogene	KNOWN	PMS2P9	1	4	0.816885
chr7	77041647	77041748	77041697	ENSG00000201959.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.816885
chr7	77043721	77198626	77121173	ENSG00000259628.1	+	processed_transcript	KNOWN	RP11-467H10.2	1	3	0.000352
chr7	77052785	77059440	77056112	ENSG00000205482.8	-	unprocessed_pseudogene	KNOWN	SPDYE18	1	7	0.638735
chr7	77060345	77060479	77060412	ENSG00000237815.1	-	processed_pseudogene	KNOWN	AC007000.11	1	1	0.638735
chr7	77071751	77072237	77071994	ENSG00000225726.1	-	processed_pseudogene	KNOWN	AC007000.10	1	1	0.156122
chr7	77083886	77122116	77103001	ENSG00000214439.3	-	unprocessed_pseudogene	KNOWN	FAM185BP	1	6	-0.114435
chr7	77115399	77116192	77115795	ENSG00000213542.3	-	processed_pseudogene	KNOWN	RP11-467H10.1	1	1	0.214849
chr7	77122434	77329533	77225983	ENSG00000135205.14	+	protein_coding	KNOWN	CCDC146	9	19	-0.114792
chr7	77193371	77199826	77196598	ENSG00000127951.5	-	protein_coding	KNOWN	FGL2	1	2	-0.383742
chr7	77246340	77258123	77252231	ENSG00000250990.1	-	antisense	KNOWN	AC073635.5	1	4	0.001279
chr7	77310751	77416400	77363575	ENSG00000186088.15	-	protein_coding	KNOWN	GSAP	13	31	0.038863
chr7	77416673	77425443	77421058	ENSG00000273341.1	+	lincRNA	KNOWN	RP5-899E9.1	1	5	-0.022778
chr7	77461458	77462139	77461798	ENSG00000237620.1	+	processed_pseudogene	KNOWN	GCNT1P5	1	1	-0.129222
chr7	77537275	77640071	77588673	ENSG00000127947.15	+	protein_coding	KNOWN	PTPN12	16	18	0.024566
chr7	77657660	77696265	77676962	ENSG00000214293.8	-	lincRNA	KNOWN	APTR	5	4	0.261580
chr7	77696443	77783022	77739732	ENSG00000187257.14	+	protein_coding	KNOWN	RSBN1L	7	10	0.179988
chr7	77793728	77798580	77796154	ENSG00000135211.5	-	protein_coding	KNOWN	TMEM60	1	2	0.250357
chr7	77798792	77957503	77878147	ENSG00000006576.16	+	protein_coding	KNOWN	PHTF2	12	20	-0.017561
chr7	77895880	77895992	77895936	ENSG00000222432.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.126343
chr7	77990384	77995171	77992777	ENSG00000232756.1	+	antisense	KNOWN	RP5-1185I7.1	3	3	0.180348
chr7	78017057	79453574	78735315	ENSG00000187391.18	-	protein_coding	KNOWN	MAGI2	18	23	-0.130859
chr7	78134079	78134851	78134465	ENSG00000281008.1	+	TEC	KNOWN	RP4-587D13.1	1	1	0.024878
chr7	78170195	78170915	78170555	ENSG00000280958.1	+	TEC	KNOWN	RP4-587D13.2	1	1	0.034441
chr7	78347142	78359458	78353300	ENSG00000231322.5	+	transcribed_processed_pseudogene	KNOWN	RPL13AP17	4	6	-0.034141
chr7	78486530	78487028	78486779	ENSG00000226230.1	+	processed_pseudogene	KNOWN	AC007237.2	1	1	-0.154802
chr7	78901275	79000298	78950786	ENSG00000235751.3	-	sense_intronic	KNOWN	MAGI2-IT1	1	4	-0.214573
chr7	78939850	78940895	78940372	ENSG00000251276.1	+	antisense	KNOWN	MAGI2-AS1	1	2	0.201114
chr7	79008988	79012277	79010632	ENSG00000226978.1	+	antisense	KNOWN	MAGI2-AS2	1	3	-0.075946
chr7	79030240	79030345	79030292	ENSG00000212545.1	+	snRNA	KNOWN	RNU6-337P	1	1	0.023044
chr7	79124739	79125750	79125244	ENSG00000229110.1	+	processed_pseudogene	KNOWN	AC006355.3	1	1	0.180048
chr7	79139829	79177210	79158519	ENSG00000281120.1	+	antisense	KNOWN	RP5-1093G23.1	1	3	-0.067289
chr7	79343266	79343372	79343319	ENSG00000212482.1	-	snRNA	KNOWN	RNU6-530P	1	1	-0.151934
chr7	79353410	79354392	79353901	ENSG00000222024.2	+	processed_pseudogene	KNOWN	AC004945.1	1	1	-0.284863
chr7	79452877	79471208	79462042	ENSG00000234456.7	+	processed_transcript	KNOWN	MAGI2-AS3	26	5	0.007935
chr7	79543911	79544853	79544382	ENSG00000226285.1	-	processed_pseudogene	KNOWN	AC091813.2	1	1	-0.391885
chr7	79654109	79654227	79654168	ENSG00000200786.1	+	rRNA	KNOWN	RNA5SP234	1	1	-0.038712
chr7	79912104	79912208	79912156	ENSG00000206818.1	-	snRNA	KNOWN	RNU6-849P	1	1	-0.045512
chr7	80096600	80097215	80096907	ENSG00000230853.1	-	processed_pseudogene	KNOWN	AC004159.1	1	1	-0.285710
chr7	80133955	80219402	80176678	ENSG00000127955.15	+	protein_coding	KNOWN	GNAI1	6	8	-0.094002
chr7	80245926	80246225	80246075	ENSG00000244392.3	+	misc_RNA	KNOWN	RN7SL869P	1	1	-0.339724
chr7	80246409	80312456	80279432	ENSG00000234223.2	-	lincRNA	KNOWN	AC003988.1	1	5	0.018028
chr7	80312574	80391474	80352024	ENSG00000232667.9	-	antisense	KNOWN	AC004862.6	21	8	-0.222493
chr7	80318253	80318544	80318398	ENSG00000240347.3	+	misc_RNA	KNOWN	RN7SL35P	1	1	-0.249625
chr7	80369575	80679277	80524426	ENSG00000135218.17	+	protein_coding	KNOWN	CD36	23	17	-0.085010
chr7	80377554	80377835	80377694	ENSG00000223550.1	-	processed_pseudogene	KNOWN	SNRPBP1	1	1	-0.159547
chr7	80458671	80512020	80485345	ENSG00000214415.3	-	protein_coding	KNOWN	GNAT3	1	8	-0.094308
chr7	80662331	80662585	80662458	ENSG00000229436.1	-	processed_pseudogene	KNOWN	AC073850.6	1	1	-0.055565
chr7	80742538	80922359	80832448	ENSG00000075223.13	-	protein_coding	KNOWN	SEMA3C	9	18	-0.097410
chr7	80972516	80974724	80973620	ENSG00000279326.1	-	TEC	KNOWN	RP5-1136A10.1	1	1	-0.239459
chr7	81175508	81199115	81187311	ENSG00000237896.6	+	lincRNA	KNOWN	AC005008.2	2	5	-0.145022
chr7	81191398	81192009	81191703	ENSG00000226671.1	+	processed_pseudogene	KNOWN	AC005008.3	1	1	-0.269516
chr7	81294538	81294621	81294579	ENSG00000273949.1	-	miRNA	NOVEL	AC004541.1	1	1	-0.193165
chr7	81335106	81335183	81335144	ENSG00000223514.1	+	processed_pseudogene	KNOWN	AC004866.1	1	1	-0.358041
chr7	81431731	81432796	81432263	ENSG00000224134.1	+	unprocessed_pseudogene	KNOWN	AC004866.3	1	3	-0.423466
chr7	81463036	81463613	81463324	ENSG00000232968.1	-	processed_pseudogene	KNOWN	EIF4EP4	1	1	-0.055565
chr7	81528403	81561783	81545093	ENSG00000234113.2	-	lincRNA	KNOWN	AC008163.4	1	4	-0.222996
chr7	81576386	81626216	81601301	ENSG00000233491.6	-	lincRNA	KNOWN	AC010091.1	2	10	-0.501295
chr7	81610884	81611326	81611105	ENSG00000230196.1	-	processed_pseudogene	KNOWN	DDX43P3	1	1	-0.574452
chr7	81699006	81770438	81734722	ENSG00000019991.15	-	protein_coding	KNOWN	HGF	10	18	-0.362973
chr7	81920203	81920270	81920236	ENSG00000263416.1	-	miRNA	NOVEL	AC006145.1	1	1	-0.239717
chr7	81946444	82443798	82195121	ENSG00000153956.15	-	protein_coding	KNOWN	CACNA2D1	12	39	-0.369290
chr7	82009177	82029955	82019566	ENSG00000223770.5	+	antisense	KNOWN	AC006145.4	2	5	-0.615789
chr7	82290077	82290162	82290119	ENSG00000221262.1	+	miRNA	NOVEL	AC005159.1	1	1	-0.169395
chr7	82589848	82590691	82590269	ENSG00000213530.3	-	processed_pseudogene	KNOWN	MTHFD2P5	1	1	-0.562583
chr7	82657035	82657411	82657223	ENSG00000228711.1	+	processed_pseudogene	KNOWN	AC004006.2	1	1	-0.424686
chr7	82754013	83162930	82958471	ENSG00000186472.19	-	protein_coding	KNOWN	PCLO	9	25	-0.695295
chr7	83017898	83018011	83017954	ENSG00000202281.1	+	rRNA	KNOWN	RNA5SP235	1	1	-1.196439
chr7	83355154	83362266	83358710	ENSG00000235503.2	+	antisense	KNOWN	AC079799.2	1	2	-0.531445
chr7	83363906	83649010	83506458	ENSG00000170381.12	-	protein_coding	KNOWN	SEMA3E	4	17	-0.620025
chr7	83424880	83425002	83424941	ENSG00000230617.1	+	processed_pseudogene	KNOWN	AC079987.2	1	1	-0.766536
chr7	83663419	83664625	83664022	ENSG00000230244.1	+	processed_pseudogene	KNOWN	RAD23BP2	1	1	-0.656824
chr7	83919602	83919703	83919652	ENSG00000222994.1	-	miRNA	NOVEL	AC006322.1	1	1	-0.418492
chr7	83955777	84492724	84224250	ENSG00000075213.10	-	protein_coding	KNOWN	SEMA3A	7	18	-0.391471
chr7	84528122	84528830	84528476	ENSG00000227982.1	-	processed_pseudogene	KNOWN	RPL7P30	1	1	-0.335119
chr7	84532476	84584322	84558399	ENSG00000235139.2	+	lincRNA	KNOWN	AC003984.1	2	3	-0.231588
chr7	84665924	84666008	84665966	ENSG00000265050.1	-	miRNA	NOVEL	AC092022.1	1	1	-0.053614
chr7	84847877	84848253	84848065	ENSG00000235243.1	-	processed_pseudogene	KNOWN	AC093716.1	1	1	-0.425067
chr7	84876554	84876956	84876755	ENSG00000232605.2	+	processed_pseudogene	KNOWN	HMGN2P11	1	1	-0.365481
chr7	84939335	84940256	84939795	ENSG00000280325.1	-	TEC	KNOWN	AC074183.3	1	1	-0.270578
chr7	84939349	84940245	84939797	ENSG00000232019.1	-	lincRNA	KNOWN	AC074183.4	1	2	-0.270578
chr7	84983556	84984506	84984031	ENSG00000229251.3	+	processed_pseudogene	KNOWN	HNRNPA1P8	1	1	-0.476576
chr7	84995553	85186855	85091204	ENSG00000153993.13	-	protein_coding	KNOWN	SEMA3D	4	17	-0.376175
chr7	85027828	85029692	85028760	ENSG00000224059.1	+	processed_pseudogene	KNOWN	HSPA8P16	1	1	-0.644974
chr7	85381118	85381375	85381246	ENSG00000230614.3	-	processed_pseudogene	KNOWN	DYNLL1P7	1	1	-0.395123
chr7	85421122	85489293	85455207	ENSG00000225128.1	+	lincRNA	KNOWN	LINC00972	2	4	-0.350808
chr7	85636013	85636344	85636178	ENSG00000227785.1	-	processed_pseudogene	KNOWN	AC092013.1	1	1	-0.375401
chr7	86216785	86217733	86217259	ENSG00000236610.1	-	processed_pseudogene	KNOWN	SOCS5P1	1	1	-0.153765
chr7	86643914	86864884	86754399	ENSG00000198822.10	+	protein_coding	KNOWN	GRM3	5	6	-0.498585
chr7	86775081	86776022	86775551	ENSG00000231255.1	-	antisense	KNOWN	AC005009.1	1	2	-0.771947
chr7	86784226	86786670	86785448	ENSG00000233073.1	-	antisense	KNOWN	AC005009.2	2	3	-0.771947
chr7	86876906	87059699	86968302	ENSG00000164659.14	-	protein_coding	KNOWN	KIAA1324L	12	22	-0.410696
chr7	87109539	87111282	87110410	ENSG00000261462.1	+	lincRNA	KNOWN	CTA-254O6.1	1	1	-0.299643
chr7	87151423	87152420	87151921	ENSG00000224046.1	-	antisense	KNOWN	AC005076.5	2	2	0.042410
chr7	87152361	87196337	87174349	ENSG00000135164.18	+	protein_coding	KNOWN	DMTF1	38	20	-0.133131
chr7	87184849	87185020	87184934	ENSG00000278236.1	+	misc_RNA	NOVEL	uc_338	1	1	-0.326073
chr7	87196160	87220587	87208373	ENSG00000135185.11	-	protein_coding	KNOWN	TMEM243	8	5	0.094716
chr7	87218611	87218712	87218661	ENSG00000200397.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.235249
chr7	87325225	87345515	87335370	ENSG00000182165.17	-	lincRNA	KNOWN	TP53TG1	7	4	-0.221041
chr7	87345082	87345233	87345157	ENSG00000273623.1	+	misc_RNA	NOVEL	TP53TG1_1	1	1	-0.261645
chr7	87345305	87345486	87345395	ENSG00000276185.1	+	misc_RNA	NOVEL	TP53TG1_2	1	1	-0.261645
chr7	87345681	87399795	87372738	ENSG00000005469.11	+	protein_coding	KNOWN	CROT	7	19	-0.082912
chr7	87401697	87480435	87441066	ENSG00000005471.15	-	protein_coding	KNOWN	ABCB4	10	28	-0.096427
chr7	87503633	87713323	87608478	ENSG00000085563.14	-	protein_coding	KNOWN	ABCB1	11	29	-0.394664
chr7	87521461	87522410	87521935	ENSG00000231956.1	+	processed_pseudogene	KNOWN	HNRNPA1P9	1	1	-0.117727
chr7	87627548	87832296	87729922	ENSG00000105784.15	+	protein_coding	KNOWN	RUNDC3B	9	12	-0.484850
chr7	87833568	87876357	87854962	ENSG00000075303.12	-	protein_coding	KNOWN	SLC25A40	8	12	-0.332349
chr7	87876216	87909541	87892878	ENSG00000006634.7	+	protein_coding	KNOWN	DBF4	8	12	-0.060608
chr7	87934143	88202889	88068516	ENSG00000008277.14	+	protein_coding	KNOWN	ADAM22	11	31	-0.390533
chr7	88205118	88226993	88216055	ENSG00000075142.13	-	protein_coding	KNOWN	SRI	10	8	0.122944
chr7	88216660	88219226	88217943	ENSG00000254003.1	+	antisense	KNOWN	CTB-167B5.1	1	2	0.217523
chr7	88219359	88304367	88261863	ENSG00000228113.7	+	antisense	KNOWN	AC003991.3	14	6	-0.383740
chr7	88270892	88306891	88288891	ENSG00000127954.12	-	protein_coding	KNOWN	STEAP4	3	5	-0.439572
chr7	88448788	88449017	88448902	ENSG00000225701.1	-	processed_pseudogene	KNOWN	EIF4A1P13	1	1	-0.274330
chr7	88449092	88449231	88449161	ENSG00000207094.1	-	snoRNA	NOVEL	SNORA67	1	1	-0.274330
chr7	88455309	88456191	88455750	ENSG00000270812.1	+	processed_pseudogene	KNOWN	CTA-326K9.1	1	1	0.091992
chr7	88512029	88513187	88512608	ENSG00000235639.1	-	processed_pseudogene	KNOWN	AC002069.6	1	1	-0.316814
chr7	88564793	88566281	88565537	ENSG00000228928.1	-	processed_pseudogene	KNOWN	AC002069.5	1	1	-0.127885
chr7	88610241	88610669	88610455	ENSG00000231763.1	-	processed_pseudogene	KNOWN	PQLC1P1	1	1	-0.587675
chr7	88639014	88640416	88639715	ENSG00000237709.1	+	processed_pseudogene	KNOWN	EEF1A1P28	1	1	-0.395360
chr7	88640521	88640627	88640574	ENSG00000211518.1	+	miRNA	NOVEL	AC006988.1	1	1	-0.395360
chr7	88710631	88756725	88733678	ENSG00000233420.1	+	lincRNA	KNOWN	AC002127.4	1	6	-0.221374
chr7	88749470	88749694	88749582	ENSG00000227979.1	+	processed_pseudogene	KNOWN	AC002127.2	1	1	-0.326152
chr7	88759368	89337057	89048212	ENSG00000182348.6	+	protein_coding	KNOWN	ZNF804B	2	4	-0.537631
chr7	88794106	88795721	88794913	ENSG00000164645.2	-	protein_coding	KNOWN	C7orf62	1	2	-0.515269
chr7	89443974	89494262	89469118	ENSG00000227863.2	+	lincRNA	KNOWN	AC002383.2	1	6	-0.455345
chr7	89754620	89754726	89754673	ENSG00000239075.1	-	snRNA	KNOWN	RNU6-274P	1	1	-0.709228
chr7	89882353	90211635	90046994	ENSG00000227646.7	-	processed_transcript	KNOWN	STEAP2-AS1	2	3	-0.362340
chr7	90119299	90122890	90121094	ENSG00000238358.2	-	lincRNA	KNOWN	RP5-1121E10.2	1	2	-0.114459
chr7	90119400	90125600	90122500	ENSG00000235436.10	+	transcribed_unprocessed_pseudogene	KNOWN	DPY19L2P4	2	3	-0.114459
chr7	90154375	90164829	90159602	ENSG00000164647.8	+	protein_coding	KNOWN	STEAP1	3	5	-0.056531
chr7	90167590	90238137	90202863	ENSG00000157214.13	+	protein_coding	KNOWN	STEAP2	10	7	-0.153711
chr7	90171341	90171424	90171382	ENSG00000223029.1	+	miRNA	NOVEL	AC004969.1	1	1	-0.158704
chr7	90245174	90311063	90278118	ENSG00000105792.19	+	protein_coding	KNOWN	CFAP69	13	23	-0.207005
chr7	90251923	90252020	90251971	ENSG00000207488.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.007928
chr7	90266034	90270216	90268125	ENSG00000234459.1	-	antisense	KNOWN	AC002064.4	1	3	-0.013665
chr7	90312496	90322592	90317544	ENSG00000225498.1	+	lincRNA	KNOWN	AC002064.5	1	3	-0.046455
chr7	90335223	90391455	90363339	ENSG00000105793.15	+	protein_coding	KNOWN	GTPBP10	12	10	-0.148448
chr7	90345873	90346218	90346045	ENSG00000280440.1	-	TEC	KNOWN	AC002064.7	1	1	-0.175781
chr7	90383721	90513402	90448561	ENSG00000157224.15	+	protein_coding	KNOWN	CLDN12	15	7	-0.044616
chr7	90403434	90513391	90458412	ENSG00000273299.1	+	processed_transcript	KNOWN	CTB-13L3.1	1	4	-0.055869
chr7	90466424	91210590	90838507	ENSG00000058091.16	+	protein_coding	KNOWN	CDK14	15	15	-0.092877
chr7	90469787	90488964	90479375	ENSG00000251154.1	+	unprocessed_pseudogene	KNOWN	AC006153.3	1	4	-0.119449
chr7	90590619	90597353	90593986	ENSG00000223969.5	-	antisense	KNOWN	AC002456.2	3	3	0.100259
chr7	90631906	90632568	90632237	ENSG00000223584.1	+	processed_pseudogene	KNOWN	TVP23CP1	1	2	0.146148
chr7	91107374	91107793	91107583	ENSG00000226254.1	+	processed_pseudogene	KNOWN	PTP4A1P3	1	1	-0.136540
chr7	91264364	91271326	91267845	ENSG00000157240.3	+	protein_coding	KNOWN	FZD1	1	1	0.041533
chr7	91311368	91515409	91413388	ENSG00000243144.6	+	lincRNA	KNOWN	RP11-115N4.1	3	6	-0.277602
chr7	91320128	91321103	91320615	ENSG00000225843.1	-	processed_pseudogene	KNOWN	NIPA2P1	1	1	-0.328851
chr7	91380778	91556848	91468813	ENSG00000235450.1	-	lincRNA	KNOWN	RP11-142A5.1	1	2	-0.303088
chr7	91638847	91643512	91641179	ENSG00000223665.1	-	lincRNA	KNOWN	CTB-111F10.1	1	2	-0.287296
chr7	91692008	91880720	91786364	ENSG00000127989.13	-	protein_coding	KNOWN	MTERF1	8	5	-0.217986
chr7	91940867	92110673	92025770	ENSG00000127914.16	+	protein_coding	KNOWN	AKAP9	16	50	-0.034428
chr7	92112151	92142952	92127551	ENSG00000001630.15	-	protein_coding	KNOWN	CYP51A1	5	10	0.200564
chr7	92112159	92179531	92145845	ENSG00000240720.7	-	protein_coding	KNOWN	LRRD1	5	11	0.204229
chr7	92134604	92180725	92157664	ENSG00000188693.7	+	antisense	KNOWN	CYP51A1-AS1	1	5	0.209619
chr7	92198969	92246166	92222567	ENSG00000001631.14	-	protein_coding	KNOWN	KRIT1	25	20	0.230678
chr7	92200014	92206857	92203435	ENSG00000243107.1	-	sense_overlapping	KNOWN	AC000120.7	1	2	0.276416
chr7	92202243	92202334	92202288	ENSG00000200769.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.276416
chr7	92204015	92204098	92204056	ENSG00000221520.1	-	miRNA	KNOWN	MIR1285-1	1	1	0.276416
chr7	92246234	92401384	92323809	ENSG00000001629.9	+	protein_coding	KNOWN	ANKIB1	7	20	0.081027
chr7	92412976	92439562	92426269	ENSG00000230927.2	-	unitary_pseudogene	KNOWN	TMBIM7P	1	7	0.082237
chr7	92442077	92442489	92442283	ENSG00000270453.1	+	processed_pseudogene	KNOWN	CTB-10G5.1	1	1	0.051803
chr7	92447453	92458836	92453144	ENSG00000157259.6	+	protein_coding	KNOWN	GATAD1	3	5	0.152304
chr7	92457564	92491610	92474587	ENSG00000244055.1	+	antisense	KNOWN	AC007566.10	2	5	0.304451
chr7	92468380	92477986	92473183	ENSG00000242950.6	-	protein_coding	KNOWN	ERVW-1	5	2	0.356542
chr7	92487020	92528531	92507775	ENSG00000127980.15	-	protein_coding	KNOWN	PEX1	10	24	0.104279
chr7	92528773	92538005	92533389	ENSG00000127993.14	+	protein_coding	KNOWN	RBM48	4	6	0.287416
chr7	92540268	92557877	92549072	ENSG00000278819.1	-	unprocessed_pseudogene	KNOWN	RP5-1099C19.2	1	5	0.401996
chr7	92560793	92590394	92575593	ENSG00000234545.7	-	protein_coding	KNOWN	FAM133B	11	12	0.372958
chr7	92604921	92836594	92720757	ENSG00000105810.9	-	protein_coding	KNOWN	CDK6	5	8	0.185009
chr7	92701708	92701814	92701761	ENSG00000206763.1	-	snRNA	KNOWN	RNU6-10P	1	1	0.208637
chr7	92836483	92917187	92876835	ENSG00000237819.5	+	antisense	KNOWN	AC002454.1	4	3	0.206035
chr7	92971002	92971299	92971150	ENSG00000266794.2	-	misc_RNA	KNOWN	RN7SL7P	1	1	-0.041491
chr7	93099513	93118023	93108768	ENSG00000205413.7	-	protein_coding	KNOWN	SAMD9	3	3	0.168138
chr7	93130055	93148369	93139212	ENSG00000177409.11	-	protein_coding	KNOWN	SAMD9L	9	6	-0.098339
chr7	93188586	93226524	93207555	ENSG00000188175.9	-	protein_coding	KNOWN	HEPACAM2	5	11	-0.083496
chr7	93232340	93361121	93296730	ENSG00000004766.15	+	protein_coding	KNOWN	VPS50	20	29	-0.071056
chr7	93424487	93574730	93499608	ENSG00000004948.13	-	protein_coding	KNOWN	CALCR	7	16	-0.339820
chr7	93482760	93482855	93482807	ENSG00000208014.1	-	miRNA	KNOWN	MIR653	1	1	-0.242427
chr7	93483936	93484019	93483977	ENSG00000207656.1	-	miRNA	KNOWN	MIR489	1	1	-0.242427
chr7	93591573	93911265	93751419	ENSG00000127928.12	+	protein_coding	KNOWN	GNGT1	5	4	-0.248304
chr7	93640349	93640416	93640382	ENSG00000281203.1	-	miRNA	NOVEL	AC005024.1	1	1	-0.555127
chr7	93669826	93670077	93669951	ENSG00000237729.2	-	processed_pseudogene	KNOWN	AC002075.4	1	1	-0.002277
chr7	93716928	93717005	93716966	ENSG00000265423.1	+	miRNA	KNOWN	MIR4652	1	1	-0.217336
chr7	93777839	93778514	93778176	ENSG00000225898.1	+	processed_pseudogene	KNOWN	AC002075.3	1	1	-0.289643
chr7	93844789	93845308	93845048	ENSG00000213483.4	+	processed_pseudogene	KNOWN	NDUFAF4P2	1	1	-0.665438
chr7	93885397	93890991	93888194	ENSG00000105825.11	-	protein_coding	KNOWN	TFPI2	3	5	-0.158167
chr7	93890913	93893601	93892257	ENSG00000234695.1	+	antisense	KNOWN	AC002076.10	1	2	0.110728
chr7	93914987	93915108	93915047	ENSG00000278388.1	+	unprocessed_pseudogene	KNOWN	GS1-345D13.1	1	1	0.134805
chr7	93921699	93928610	93925154	ENSG00000127920.5	+	protein_coding	KNOWN	GNG11	1	2	0.134805
chr7	93954044	93956519	93955281	ENSG00000278959.1	-	TEC	KNOWN	RP11-455I9.1	1	1	0.282514
chr7	93962762	94004382	93983572	ENSG00000105829.11	-	protein_coding	KNOWN	BET1	7	7	0.122029
chr7	93969442	94011113	93990277	ENSG00000236861.6	+	antisense	KNOWN	AC006378.2	2	4	0.105905
chr7	94022833	94066661	94044747	ENSG00000236453.5	+	lincRNA	KNOWN	AC003092.1	2	5	-0.008265
chr7	94071759	94077157	94074458	ENSG00000236938.1	-	lincRNA	KNOWN	AC003092.2	1	3	0.145290
chr7	94394561	94431232	94412896	ENSG00000164692.17	+	protein_coding	KNOWN	COL1A2	13	52	0.734317
chr7	94495299	94495404	94495351	ENSG00000222870.1	+	snRNA	KNOWN	RNU6-1328P	1	1	-0.168071
chr7	94509219	94557019	94533119	ENSG00000127995.16	+	protein_coding	KNOWN	CASD1	6	18	-0.098128
chr7	94585230	94656209	94620719	ENSG00000127990.15	-	protein_coding	KNOWN	SGCE	11	12	-0.000043
chr7	94656325	94669695	94663010	ENSG00000242265.5	+	protein_coding	KNOWN	PEG10	9	3	0.125939
chr7	94695027	94695819	94695423	ENSG00000232385.2	-	processed_pseudogene	KNOWN	RPS3AP25	1	1	0.442273
chr7	94712409	94712511	94712460	ENSG00000239030.1	+	snRNA	KNOWN	RNU6-956P	1	1	0.101773
chr7	94738652	94739411	94739031	ENSG00000214342.2	+	processed_pseudogene	KNOWN	ATP5F1P2	1	1	-0.166160
chr7	94782886	94783525	94783205	ENSG00000230682.1	+	processed_pseudogene	KNOWN	GRPEL2P3	1	1	-0.305156
chr7	94801514	94801812	94801663	ENSG00000222220.1	+	misc_RNA	KNOWN	RN7SKP129	1	1	-0.124583
chr7	94833904	94834447	94834175	ENSG00000219807.2	+	processed_pseudogene	KNOWN	ARF1P1	1	1	-0.316648
chr7	94907202	95296415	95101808	ENSG00000158528.11	+	protein_coding	KNOWN	PPP1R9A	8	20	-0.120466
chr7	95018163	95018397	95018280	ENSG00000271159.1	-	processed_pseudogene	KNOWN	HINT1P2	1	1	-0.331816
chr7	95018407	95018554	95018480	ENSG00000231153.1	+	processed_pseudogene	KNOWN	AC002429.4	1	1	-0.331816
chr7	95098227	95098367	95098297	ENSG00000201607.1	+	snRNA	KNOWN	RNU4-16P	1	1	0.204018
chr7	95154713	95214332	95184522	ENSG00000236197.2	-	antisense	KNOWN	AC002429.5	1	4	-0.230011
chr7	95156606	95156671	95156638	ENSG00000277296.1	-	miRNA	NOVEL	AC002429.1	1	1	-0.140893
chr7	95297676	95324707	95311191	ENSG00000005421.8	-	protein_coding	KNOWN	PON1	4	9	-0.074716
chr7	95348718	95348910	95348814	ENSG00000237160.2	-	processed_pseudogene	KNOWN	AC004022.7	1	1	-0.244658
chr7	95350164	95351229	95350696	ENSG00000228751.1	+	processed_pseudogene	KNOWN	AC004022.8	1	1	0.237533
chr7	95359944	95396368	95378156	ENSG00000105852.10	-	protein_coding	KNOWN	PON3	10	9	0.004211
chr7	95404863	95435329	95420096	ENSG00000105854.12	-	protein_coding	KNOWN	PON2	18	9	0.125948
chr7	95416108	95416462	95416285	ENSG00000273138.1	+	antisense	KNOWN	GS1-293C5.1	1	1	0.135319
chr7	95471835	95473998	95472916	ENSG00000233942.1	+	lincRNA	KNOWN	AC004012.1	1	2	0.106865
chr7	95478444	95540232	95509338	ENSG00000005981.12	+	protein_coding	KNOWN	ASB4	3	5	0.108919
chr7	95542145	95544542	95543343	ENSG00000279525.1	+	TEC	KNOWN	GS1-306C12.1	1	1	-0.073067
chr7	95583499	95596491	95589995	ENSG00000004799.7	-	protein_coding	KNOWN	PDK4	5	11	-0.262199
chr7	95596682	95613719	95605200	ENSG00000231170.5	+	antisense	KNOWN	AC002451.3	3	2	-0.026111
chr7	95772506	96110322	95941414	ENSG00000158560.14	+	protein_coding	KNOWN	DYNC1I1	12	17	-0.189494
chr7	96118647	96119995	96119321	ENSG00000279067.1	+	TEC	KNOWN	GS1-25M2.1	1	1	-0.174402
chr7	96120220	96322147	96221183	ENSG00000004864.13	-	protein_coding	KNOWN	SLC25A13	8	18	-0.002490
chr7	96219662	96219756	96219709	ENSG00000208025.1	-	miRNA	KNOWN	MIR591	1	1	-0.147079
chr7	96283357	96283804	96283580	ENSG00000237551.1	+	processed_pseudogene	KNOWN	AC096775.2	1	1	0.067879
chr7	96306760	96306860	96306810	ENSG00000220987.1	-	miRNA	NOVEL	AC084368.1	1	1	0.328528
chr7	96306810	96306874	96306842	ENSG00000275834.1	+	processed_pseudogene	KNOWN	RP11-440E5.1	1	1	0.328528
chr7	96330638	96330744	96330691	ENSG00000207045.1	+	snRNA	KNOWN	RNU6-532P	1	1	0.061618
chr7	96341140	96341246	96341193	ENSG00000207115.1	+	snRNA	KNOWN	RNU6-364P	1	1	0.061618
chr7	96377857	96377920	96377888	ENSG00000252872.1	+	snRNA	KNOWN	RNU7-188P	1	1	-0.647619
chr7	96468331	96468422	96468376	ENSG00000238385.1	-	miRNA	NOVEL	AC004458.1	1	1	-0.037568
chr7	96481626	96709891	96595758	ENSG00000127922.9	-	protein_coding	KNOWN	SHFM1	24	6	-0.231332
chr7	96858182	96859618	96858900	ENSG00000227284.2	+	processed_pseudogene	KNOWN	MARK2P10	1	1	-0.431043
chr7	96940068	96940364	96940216	ENSG00000244318.3	-	misc_RNA	KNOWN	RN7SL252P	1	1	-0.098439
chr7	96955141	97014065	96984603	ENSG00000231764.8	-	antisense	KNOWN	DLX6-AS1	8	3	-0.167049
chr7	96965302	96965481	96965391	ENSG00000274409.1	+	misc_RNA	NOVEL	Evf1_1	1	1	-0.012804
chr7	96965489	96965695	96965592	ENSG00000277124.1	+	misc_RNA	NOVEL	Evf1_2	1	1	-0.012804
chr7	97005548	97011039	97008293	ENSG00000006377.10	+	protein_coding	KNOWN	DLX6	3	3	-0.196444
chr7	97013925	97014066	97013995	ENSG00000274709.1	-	misc_RNA	NOVEL	Evf-2_5p	1	1	-0.169449
chr7	97020392	97025097	97022744	ENSG00000105880.4	-	protein_coding	KNOWN	DLX5	3	3	-0.169449
chr7	97116590	97181763	97149176	ENSG00000196636.7	+	protein_coding	KNOWN	SDHAF3	4	3	0.077322
chr7	97135015	97135561	97135288	ENSG00000224551.1	-	processed_pseudogene	KNOWN	HMGB3P21	1	1	0.172610
chr7	97200708	97201483	97201095	ENSG00000224475.1	-	processed_pseudogene	KNOWN	AC073900.4	1	1	-0.064599
chr7	97291514	97291596	97291555	ENSG00000221192.1	-	miRNA	NOVEL	AC004745.1	1	1	-0.093564
chr7	97437518	97437896	97437707	ENSG00000226046.1	+	processed_pseudogene	KNOWN	AP1S2P1	1	1	-0.259994
chr7	97598933	97599260	97599096	ENSG00000199475.1	-	misc_RNA	KNOWN	RN7SKP104	1	1	-0.094709
chr7	97731908	97740472	97736190	ENSG00000006128.11	+	protein_coding	KNOWN	TAC1	5	7	-0.298593
chr7	97852118	97872542	97862330	ENSG00000070669.16	-	protein_coding	KNOWN	ASNS	17	14	0.059455
chr7	97870167	97870289	97870228	ENSG00000226744.1	+	processed_pseudogene	KNOWN	AC079781.5	1	1	0.099769
chr7	97885868	97886074	97885971	ENSG00000231812.1	+	processed_pseudogene	KNOWN	SNRPCP9	1	1	0.099769
chr7	97898347	97899115	97898731	ENSG00000237818.1	-	processed_pseudogene	KNOWN	RPS3AP29	1	1	-0.023485
chr7	97905972	97906119	97906045	ENSG00000221048.1	+	miRNA	NOVEL	AC079781.1	1	1	-0.023485
chr7	97906429	97906822	97906625	ENSG00000231859.1	+	processed_pseudogene	KNOWN	AC007875.2	1	1	-0.023485
chr7	97908256	97908424	97908340	ENSG00000232032.1	+	processed_pseudogene	KNOWN	AC079781.7	1	1	-0.023485
chr7	97938439	97938794	97938616	ENSG00000232097.1	-	processed_pseudogene	KNOWN	AC079781.8	1	1	0.433029
chr7	97946987	97947998	97947492	ENSG00000238228.1	-	unprocessed_pseudogene	KNOWN	OR7E7P	1	1	0.433029
chr7	97963658	97963726	97963692	ENSG00000266318.1	+	miRNA	KNOWN	MIR5692A1	1	1	0.155186
chr7	97964405	97964481	97964443	ENSG00000266668.1	-	miRNA	KNOWN	MIR5692C2	1	1	0.155186
chr7	97966090	97967074	97966582	ENSG00000183444.10	-	unprocessed_pseudogene	KNOWN	OR7E38P	1	1	0.155186
chr7	97969005	97972254	97970629	ENSG00000243554.1	-	unprocessed_pseudogene	KNOWN	AC004967.7	1	6	0.160480
chr7	97984684	97991169	97987926	ENSG00000135175.5	-	protein_coding	KNOWN	OCM2	2	4	0.146991
chr7	97998325	97998622	97998473	ENSG00000277946.1	+	misc_RNA	KNOWN	RN7SL478P	1	1	0.075118
chr7	98106885	98209633	98158259	ENSG00000164715.5	+	protein_coding	KNOWN	LMTK2	2	14	0.342018
chr7	98211427	98212979	98212203	ENSG00000180535.3	+	protein_coding	KNOWN	BHLHA15	2	2	0.830830
chr7	98214624	98252251	98233437	ENSG00000205356.9	-	protein_coding	KNOWN	TECPR1	17	26	0.874599
chr7	98252379	98310441	98281410	ENSG00000164713.9	+	protein_coding	KNOWN	BRI3	7	4	0.949079
chr7	98291651	98401068	98346359	ENSG00000006453.13	-	protein_coding	KNOWN	BAIAP2L1	5	14	0.477827
chr7	98322853	98323430	98323141	ENSG00000272950.1	+	antisense	KNOWN	RP11-307C18.1	1	1	0.258502
chr7	98385801	98386584	98386192	ENSG00000214389.2	-	processed_pseudogene	KNOWN	RPS3AP26	1	1	0.520085
chr7	98454119	98454617	98454368	ENSG00000213455.3	-	processed_pseudogene	KNOWN	AC091654.7	1	1	0.342886
chr7	98478551	98479225	98478888	ENSG00000223402.1	-	processed_pseudogene	KNOWN	AC074121.4	1	2	0.400114
chr7	98617297	98629868	98623582	ENSG00000106236.3	+	protein_coding	KNOWN	NPTX2	2	5	0.100120
chr7	98794718	98794824	98794771	ENSG00000207204.1	-	snRNA	KNOWN	RNU6-393P	1	1	0.182662
chr7	98846488	98870771	98858629	ENSG00000166448.14	-	protein_coding	KNOWN	TMEM130	8	8	0.795779
chr7	98877933	99013243	98945588	ENSG00000196367.12	+	protein_coding	KNOWN	TRRAP	7	72	0.767538
chr7	98881650	98881729	98881689	ENSG00000266019.1	+	miRNA	KNOWN	MIR3609	1	1	0.805209
chr7	98998538	98999930	98999234	ENSG00000238109.1	-	processed_pseudogene	KNOWN	AC004893.10	1	1	0.773083
chr7	99013165	99048240	99030702	ENSG00000242687.2	+	antisense	KNOWN	AC004893.11	3	6	0.851160
chr7	99027438	99144100	99085769	ENSG00000198742.9	-	protein_coding	KNOWN	SMURF1	4	19	0.596047
chr7	99173574	99207506	99190540	ENSG00000185467.7	-	protein_coding	KNOWN	KPNA7	1	10	0.575916
chr7	99238794	99311130	99274962	ENSG00000002079.12	+	unitary_pseudogene	KNOWN	MYH16	7	43	0.607118
chr7	99325898	99388164	99357031	ENSG00000241685.8	+	protein_coding	KNOWN	ARPC1A	6	14	0.847311
chr7	99374249	99394801	99384525	ENSG00000130429.12	+	protein_coding	KNOWN	ARPC1B	21	12	1.168129
chr7	99392048	99408829	99400438	ENSG00000106244.12	-	protein_coding	KNOWN	PDAP1	5	6	1.345048
chr7	99408641	99419616	99414128	ENSG00000106245.9	+	protein_coding	KNOWN	BUD31	9	6	1.095692
chr7	99416739	99466163	99441451	ENSG00000106246.17	-	protein_coding	KNOWN	PTCD1	5	8	1.107090
chr7	99419749	99466197	99442973	ENSG00000248919.7	-	protein_coding	KNOWN	ATP5J2-PTCD1	3	9	1.110230
chr7	99438922	99457371	99448146	ENSG00000160917.14	+	protein_coding	KNOWN	CPSF4	13	8	1.111660
chr7	99442890	99443496	99443193	ENSG00000228335.1	-	processed_pseudogene	KNOWN	AC073063.10	1	1	1.006062
chr7	99448475	99466331	99457403	ENSG00000241468.7	-	protein_coding	KNOWN	ATP5J2	12	4	1.247774
chr7	99472841	99503650	99488245	ENSG00000198556.13	+	protein_coding	KNOWN	ZNF789	12	7	0.737004
chr7	99486519	99500324	99493421	ENSG00000160908.14	-	protein_coding	KNOWN	ZNF394	7	4	0.711536
chr7	99504651	99534700	99519675	ENSG00000196652.11	+	protein_coding	KNOWN	ZKSCAN5	4	7	0.639132
chr7	99546308	99558536	99552422	ENSG00000221909.2	-	protein_coding	KNOWN	FAM200A	2	2	0.604037
chr7	99558406	99576453	99567429	ENSG00000197343.10	+	protein_coding	KNOWN	ZNF655	25	6	0.617341
chr7	99558695	99607810	99583252	ENSG00000272647.2	+	protein_coding	KNOWN	GS1-259H13.13	2	6	0.665107
chr7	99586915	99586999	99586957	ENSG00000265324.1	+	miRNA	NOVEL	AC005020.1	1	1	0.655071
chr7	99598066	99610813	99604439	ENSG00000244219.6	+	lincRNA	KNOWN	GS1-259H13.2	3	6	0.721368
chr7	99616946	99632407	99624676	ENSG00000197037.10	+	protein_coding	KNOWN	ZSCAN25	10	8	0.738307
chr7	99638242	99638767	99638504	ENSG00000224448.1	-	processed_pseudogene	KNOWN	GS1-259H13.7	1	1	0.723248
chr7	99648194	99679998	99664096	ENSG00000106258.13	-	protein_coding	KNOWN	CYP3A5	15	14	0.061394
chr7	99684957	99735102	99710029	ENSG00000282301.1	-	protein_coding	KNOWN	CYP3A7-CYP3A51P	2	15	0.024194
chr7	99685145	99700034	99692589	ENSG00000282277.1	-	unprocessed_pseudogene	KNOWN	CYP3A51P	1	3	0.115254
chr7	99705037	99735196	99720116	ENSG00000160870.12	-	protein_coding	KNOWN	CYP3A7	4	13	-0.031634
chr7	99713037	99713152	99713094	ENSG00000221487.1	+	miRNA	NOVEL	AC069294.1	1	1	-0.087233
chr7	99756960	99784265	99770612	ENSG00000160868.14	-	protein_coding	KNOWN	CYP3A4	4	13	-0.011794
chr7	99766543	99766892	99766717	ENSG00000273407.1	+	antisense	KNOWN	RP11-757A13.1	1	1	-0.143386
chr7	99820018	99820086	99820052	ENSG00000261511.1	+	unprocessed_pseudogene	KNOWN	CYP3A137P	1	1	-0.022872
chr7	99828013	99866102	99847057	ENSG00000021461.16	+	protein_coding	KNOWN	CYP3A43	17	14	0.000121
chr7	99869841	99869894	99869867	ENSG00000260445.1	+	unprocessed_pseudogene	KNOWN	CTD-3244O18.5	1	1	0.035958
chr7	99872168	99872258	99872213	ENSG00000260524.1	+	unprocessed_pseudogene	KNOWN	CYP3A52P	1	1	0.018825
chr7	99875987	99877057	99876522	ENSG00000244623.1	-	protein_coding	KNOWN	OR2AE1	1	1	0.018825
chr7	99876958	99919600	99898279	ENSG00000146833.15	-	protein_coding	KNOWN	TRIM4	5	7	0.406619
chr7	99923269	99929620	99926444	ENSG00000176402.5	-	protein_coding	KNOWN	GJC3	1	2	0.733538
chr7	99929392	99948620	99939006	ENSG00000237640.1	+	antisense	KNOWN	RP4-604G5.1	1	3	0.445560
chr7	99936610	99936711	99936660	ENSG00000199711.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.436173
chr7	99952033	99952158	99952095	ENSG00000222966.1	+	snoRNA	NOVEL	SNORA40	1	1	0.366852
chr7	99966720	99976157	99971438	ENSG00000160862.12	-	protein_coding	KNOWN	AZGP1	6	4	0.380833
chr7	99980762	99987535	99984148	ENSG00000214313.8	+	transcribed_unprocessed_pseudogene	KNOWN	AZGP1P1	2	4	0.388278
chr7	99992397	99993050	99992723	ENSG00000235713.1	+	unprocessed_pseudogene	KNOWN	RP4-604G5.3	1	1	0.664442
chr7	100015572	100041689	100028630	ENSG00000106261.16	+	protein_coding	KNOWN	ZKSCAN1	6	8	0.798770
chr7	100049774	100065038	100057406	ENSG00000166529.14	+	protein_coding	KNOWN	ZSCAN21	5	5	0.864139
chr7	100064033	100082548	100073290	ENSG00000166526.16	-	protein_coding	KNOWN	ZNF3	15	6	0.946167
chr7	100088954	100092200	100090577	ENSG00000168090.9	+	protein_coding	KNOWN	COPS6	10	10	1.081145
chr7	100092728	100101940	100097334	ENSG00000166508.17	-	protein_coding	KNOWN	MCM7	13	15	1.126757
chr7	100093560	100093643	100093601	ENSG00000207547.1	-	miRNA	KNOWN	MIR25	1	1	1.126757
chr7	100093768	100093847	100093807	ENSG00000207757.1	-	miRNA	KNOWN	MIR93	1	1	1.126757
chr7	100093993	100094074	100094033	ENSG00000208036.1	-	miRNA	KNOWN	MIR106B	1	1	1.126757
chr7	100101549	100110345	100105947	ENSG00000221838.9	+	protein_coding	KNOWN	AP4M1	17	16	1.132673
chr7	100107070	100119841	100113455	ENSG00000106290.14	-	protein_coding	KNOWN	TAF6	19	15	1.242658
chr7	100115214	100127139	100121176	ENSG00000242798.1	-	antisense	KNOWN	RP11-506M12.1	1	2	1.277151
chr7	100119613	100125511	100122562	ENSG00000166997.7	+	protein_coding	KNOWN	CNPY4	5	6	1.277151
chr7	100126694	100128498	100127596	ENSG00000214309.4	+	protein_coding	KNOWN	MBLAC1	2	2	1.277151
chr7	100130964	100140439	100135701	ENSG00000235077.1	+	antisense	KNOWN	AC073842.19	1	2	1.000069
chr7	100139629	100140682	100140155	ENSG00000214142.2	-	processed_pseudogene	KNOWN	RPL7P60	1	2	1.000069
chr7	100148907	100155944	100152425	ENSG00000188186.10	+	protein_coding	KNOWN	LAMTOR4	12	4	1.123726
chr7	100154420	100158715	100156567	ENSG00000146826.14	-	protein_coding	KNOWN	C7orf43	11	11	1.146440
chr7	100156605	100156669	100156637	ENSG00000266154.1	-	miRNA	KNOWN	MIR4658	1	1	1.146440
chr7	100159244	100168750	100163997	ENSG00000197093.10	-	protein_coding	KNOWN	GAL3ST4	8	4	1.146440
chr7	100169606	100177372	100173489	ENSG00000213420.7	-	protein_coding	KNOWN	GPC2	5	10	0.869704
chr7	100177563	100221488	100199525	ENSG00000066923.17	+	protein_coding	KNOWN	STAG3	19	34	0.812179
chr7	100200653	100272218	100236435	ENSG00000239521.7	-	protein_coding	KNOWN	GATS	11	8	0.988138
chr7	100217065	100217165	100217115	ENSG00000281555.1	-	miRNA	NOVEL	AC005071.3	1	1	1.059014
chr7	100218241	100221490	100219865	ENSG00000213413.2	+	protein_coding	KNOWN	PVRIG	2	6	1.059014
chr7	100220027	100220120	100220073	ENSG00000222482.1	-	miRNA	NOVEL	AC005071.1	1	1	1.059014
chr7	100307702	100322196	100314949	ENSG00000214300.7	+	protein_coding	KNOWN	SPDYE3	2	11	0.895177
chr7	100320992	100341908	100331450	ENSG00000078319.8	-	unprocessed_pseudogene	KNOWN	PMS2P1	1	6	0.792375
chr7	100330777	100330877	100330827	ENSG00000201913.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.728180
chr7	100336079	100351900	100343989	ENSG00000242294.6	+	transcribed_unprocessed_pseudogene	KNOWN	STAG3L5P	7	6	0.783143
chr7	100336104	100367831	100351967	ENSG00000272752.6	+	processed_transcript	KNOWN	STAG3L5P-PVRIG2P-PILRB	5	18	0.985273
chr7	100344375	100344475	100344425	ENSG00000281827.1	-	miRNA	NOVEL	AC005071.4	1	1	0.728180
chr7	100352176	100367733	100359954	ENSG00000121716.18	+	protein_coding	KNOWN	PILRB	13	11	1.185605
chr7	100352360	100353692	100353026	ENSG00000235333.3	+	transcribed_unprocessed_pseudogene	KNOWN	PVRIG2P	1	5	1.185605
chr7	100356651	100356721	100356686	ENSG00000278005.1	+	miRNA	KNOWN	MIR6840	1	1	1.185605
chr7	100367530	100400099	100383814	ENSG00000085514.15	+	protein_coding	KNOWN	PILRA	7	7	1.187387
chr7	100372544	100372609	100372576	ENSG00000278832.1	+	miRNA	NOVEL	AC005071.2	1	1	1.409962
chr7	100400826	100428992	100414909	ENSG00000078487.17	-	protein_coding	KNOWN	ZCWPW1	8	18	0.903021
chr7	100428790	100434126	100431458	ENSG00000146834.13	+	protein_coding	KNOWN	MEPCE	4	5	1.021395
chr7	100435257	100436510	100435883	ENSG00000241357.1	+	antisense	KNOWN	RP11-758P17.2	1	2	1.034009
chr7	100435282	100436565	100435923	ENSG00000160813.6	-	protein_coding	KNOWN	PPP1R35	5	4	1.034009
chr7	100436204	100438504	100437354	ENSG00000240211.1	+	antisense	KNOWN	RP11-758P17.3	1	2	1.034009
chr7	100456615	100464271	100460443	ENSG00000185955.4	-	protein_coding	KNOWN	C7orf61	2	3	1.120943
chr7	100463359	100479279	100471319	ENSG00000166925.8	-	protein_coding	KNOWN	TSC22D4	6	5	1.294056
chr7	100483927	100494799	100489363	ENSG00000166924.8	+	protein_coding	KNOWN	NYAP1	4	7	1.249985
chr7	100509717	100519926	100514821	ENSG00000225807.1	+	lincRNA	KNOWN	RP11-44M6.1	1	5	1.039838
chr7	100530362	100530659	100530510	ENSG00000242101.3	-	misc_RNA	KNOWN	RN7SL416P	1	1	0.962112
chr7	100539211	100568219	100553715	ENSG00000106351.12	+	protein_coding	KNOWN	AGFG2	5	12	1.040889
chr7	100570131	100571136	100570633	ENSG00000184414.2	+	processed_pseudogene	KNOWN	RP11-44M6.3	1	1	1.556067
chr7	100572228	100573820	100573024	ENSG00000205307.11	-	protein_coding	KNOWN	SAP25	4	6	1.556067
chr7	100572232	100578700	100575466	ENSG00000274272.1	-	processed_transcript	KNOWN	RP11-44M6.7	1	16	1.556067
chr7	100574011	100586153	100580082	ENSG00000077454.15	-	protein_coding	KNOWN	LRCH4	11	18	1.556067
chr7	100583982	100601117	100592549	ENSG00000106336.12	+	protein_coding	KNOWN	FBXO24	9	10	1.405675
chr7	100589402	100604206	100596804	ENSG00000224729.5	-	antisense	KNOWN	PCOLCE-AS1	2	9	1.333630
chr7	100602177	100608175	100605176	ENSG00000106333.12	+	protein_coding	KNOWN	PCOLCE	10	9	1.324283
chr7	100612102	100615384	100613743	ENSG00000106330.11	+	protein_coding	KNOWN	MOSPD3	8	6	1.658046
chr7	100620416	100642779	100631597	ENSG00000106327.12	-	protein_coding	KNOWN	TFR2	13	19	1.482086
chr7	100643097	100656461	100649779	ENSG00000077080.9	-	protein_coding	KNOWN	ACTL6B	6	14	1.149600
chr7	100673531	100679174	100676352	ENSG00000172354.9	+	protein_coding	KNOWN	GNB2	13	10	1.450886
chr7	100679507	100689448	100684477	ENSG00000146830.9	-	protein_coding	KNOWN	GIGYF1	4	24	1.450886
chr7	100706053	100707495	100706774	ENSG00000172336.4	+	protein_coding	KNOWN	POP7	2	2	1.299392
chr7	100720800	100723700	100722250	ENSG00000130427.2	+	protein_coding	KNOWN	EPO	1	5	1.096438
chr7	100733626	100797797	100765711	ENSG00000146839.18	+	protein_coding	KNOWN	ZAN	8	48	0.980900
chr7	100802565	100827521	100815043	ENSG00000196411.9	-	protein_coding	KNOWN	EPHB4	10	17	0.906556
chr7	100821027	100821264	100821145	ENSG00000263672.2	-	misc_RNA	KNOWN	RN7SL750P	1	1	0.909615
chr7	100826820	100867009	100846914	ENSG00000146828.17	+	protein_coding	KNOWN	SLC12A9	15	14	1.010355
chr7	100837314	100852616	100844965	ENSG00000236305.1	-	antisense	KNOWN	RP11-126L15.4	1	2	1.023518
chr7	100867138	100873454	100870296	ENSG00000087077.11	+	protein_coding	KNOWN	TRIP6	10	9	1.067654
chr7	100868036	100868107	100868071	ENSG00000273985.1	+	miRNA	KNOWN	MIR6875	1	1	1.010564
chr7	100875111	100888664	100881887	ENSG00000087087.18	+	protein_coding	KNOWN	SRRT	18	20	1.114929
chr7	100888723	100889718	100889220	ENSG00000176125.4	-	protein_coding	KNOWN	UFSP1	1	1	1.114929
chr7	100889994	100896974	100893484	ENSG00000087085.13	-	protein_coding	KNOWN	ACHE	14	5	1.471717
chr7	100906291	100906572	100906431	ENSG00000239825.3	-	misc_RNA	KNOWN	RN7SL549P	1	1	1.471973
chr7	100928370	100928540	100928455	ENSG00000235926.1	+	processed_pseudogene	KNOWN	RP13-650G11.1	1	1	0.788800
chr7	100949555	100968346	100958950	ENSG00000169894.17	+	protein_coding	KNOWN	MUC3A	4	12	0.814088
chr7	100963828	100968124	100965976	ENSG00000274993.1	-	antisense	KNOWN	RP11-395B7.2	2	6	0.816493
chr7	100969623	101018949	100994286	ENSG00000205277.9	+	protein_coding	KNOWN	MUC12	6	15	0.826844
chr7	101014320	101017608	101015964	ENSG00000227053.1	-	antisense	KNOWN	RP11-395B7.4	2	3	0.835560
chr7	101020072	101058745	101039408	ENSG00000169876.13	+	protein_coding	KNOWN	MUC17	4	13	0.815223
chr7	101058299	101058567	101058433	ENSG00000222636.1	+	misc_RNA	KNOWN	RN7SKP54	1	1	0.853381
chr7	101085439	101097967	101091703	ENSG00000169871.12	+	protein_coding	KNOWN	TRIM56	4	4	1.009792
chr7	101127089	101139266	101133177	ENSG00000106366.8	+	protein_coding	KNOWN	SERPINE1	1	9	1.147797
chr7	101154397	101161596	101157996	ENSG00000106367.13	+	protein_coding	KNOWN	AP1S1	3	6	1.219227
chr7	101159473	101159555	101159514	ENSG00000264425.1	+	miRNA	KNOWN	MIR4653	1	1	1.219227
chr7	101162509	101165593	101164051	ENSG00000128564.6	-	protein_coding	KNOWN	VGF	3	4	1.219227
chr7	101170493	101180276	101175384	ENSG00000167011.8	-	protein_coding	KNOWN	NAT16	4	5	1.367626
chr7	101195007	101201021	101198014	ENSG00000106384.10	-	protein_coding	KNOWN	MOGAT3	3	7	0.995607
chr7	101201809	101203526	101202667	ENSG00000205267.5	-	unprocessed_pseudogene	KNOWN	DGAT2L7P	1	5	0.995607
chr7	101203614	101204495	101204054	ENSG00000213394.3	-	processed_pseudogene	KNOWN	RPSAP46	1	1	0.995607
chr7	101205977	101218420	101212198	ENSG00000106397.11	-	protein_coding	KNOWN	PLOD3	16	19	0.979426
chr7	101217668	101224190	101220929	ENSG00000106400.11	+	protein_coding	KNOWN	ZNHIT1	4	6	0.971698
chr7	101232092	101238820	101235456	ENSG00000106404.13	-	protein_coding	KNOWN	CLDN15	8	6	1.176228
chr7	101239458	101252316	101245887	ENSG00000214253.8	-	protein_coding	KNOWN	FIS1	9	5	1.161860
chr7	101269938	101270041	101269989	ENSG00000207454.1	-	snRNA	KNOWN	RNU6-1104P	1	1	0.943193
chr7	101273322	101273715	101273518	ENSG00000278683.1	+	unprocessed_pseudogene	KNOWN	RP11-132A1.6	1	1	0.720544
chr7	101287482	101289771	101288626	ENSG00000214252.4	-	unprocessed_pseudogene	KNOWN	AZGP1P2	1	2	0.720544
chr7	101299613	101301270	101300441	ENSG00000232301.1	+	antisense	KNOWN	RP11-132A1.3	1	2	0.923869
chr7	101308346	101310985	101309665	ENSG00000232445.1	+	antisense	KNOWN	RP11-132A1.4	1	2	0.941568
chr7	101313367	101321823	101317595	ENSG00000128581.15	-	protein_coding	KNOWN	IFT22	11	6	0.971240
chr7	101362820	101559024	101460922	ENSG00000160963.13	+	protein_coding	KNOWN	COL26A1	3	13	0.687592
chr7	101388868	101389080	101388974	ENSG00000233683.1	-	processed_pseudogene	KNOWN	RP5-1106H14.1	1	1	0.908171
chr7	101562779	101569006	101565892	ENSG00000233123.1	-	lincRNA	KNOWN	LINC01007	3	3	1.019388
chr7	101613325	101629296	101621310	ENSG00000106436.4	-	protein_coding	KNOWN	MYL10	1	8	0.778575
chr7	101635218	101638685	101636951	ENSG00000279538.1	+	protein_coding	KNOWN	AC004953.1	1	6	0.518084
chr7	101815904	102283957	102049930	ENSG00000257923.9	+	protein_coding	KNOWN	CUX1	21	24	0.627355
chr7	101822247	101824729	101823488	ENSG00000259294.1	-	antisense	KNOWN	CTA-339C12.1	1	2	0.101094
chr7	101960116	101961894	101961005	ENSG00000272219.1	+	sense_intronic	KNOWN	CTB-181H17.1	1	1	0.793147
chr7	102153355	102154463	102153909	ENSG00000261535.1	-	antisense	KNOWN	CTA-305I2.1	1	2	0.742407
chr7	102161120	102161337	102161228	ENSG00000280404.1	-	pseudogene	NOVEL	AC005086.3	1	3	0.742407
chr7	102186819	102187039	102186929	ENSG00000280004.1	-	pseudogene	NOVEL	AC005086.2	1	2	0.893766
chr7	102188599	102188828	102188713	ENSG00000279724.1	-	pseudogene	NOVEL	AC005086.1	1	2	0.893766
chr7	102194076	102194164	102194120	ENSG00000252824.1	-	snoRNA	NOVEL	SNORA48	1	1	0.507029
chr7	102238321	102238406	102238363	ENSG00000264642.1	-	miRNA	NOVEL	AC005088.1	1	1	0.963668
chr7	102264706	102264979	102264842	ENSG00000278586.1	-	processed_pseudogene	KNOWN	CTA-313A17.5	1	1	0.538838
chr7	102285091	102321711	102303401	ENSG00000160999.10	+	protein_coding	KNOWN	SH2B2	3	9	0.925409
chr7	102293103	102293187	102293145	ENSG00000264675.1	+	miRNA	KNOWN	MIR4285	1	1	0.875417
chr7	102327256	102329530	102328393	ENSG00000170409.7	-	unprocessed_pseudogene	KNOWN	CTA-313A17.2	1	3	0.982114
chr7	102336869	102336970	102336919	ENSG00000200552.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.613108
chr7	102337316	102339115	102338215	ENSG00000228546.2	+	unprocessed_pseudogene	KNOWN	CTA-313A17.3	1	3	0.613108
chr7	102347206	102356444	102351825	ENSG00000260097.2	-	protein_coding	KNOWN	SPDYE6	1	8	0.676643
chr7	102363872	102426676	102395274	ENSG00000128563.13	+	protein_coding	KNOWN	PRKRIP1	8	10	0.661641
chr7	102364162	102380633	102372397	ENSG00000239969.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-163E9.2	3	5	0.635001
chr7	102380465	102382737	102381601	ENSG00000239486.1	-	unprocessed_pseudogene	KNOWN	RP11-163E9.1	1	3	0.597031
chr7	102405742	102405855	102405798	ENSG00000221510.1	-	miRNA	KNOWN	MIR548O	1	1	0.724535
chr7	102426818	102434780	102430799	ENSG00000239480.1	-	antisense	KNOWN	RP11-514P8.2	1	3	0.872950
chr7	102433106	102456821	102444963	ENSG00000160991.15	+	protein_coding	KNOWN	ORAI2	10	4	0.955819
chr7	102456238	102464876	102460557	ENSG00000160993.3	-	protein_coding	KNOWN	ALKBH4	3	3	0.790528
chr7	102464929	102473168	102469048	ENSG00000161036.10	+	protein_coding	KNOWN	LRWD1	9	15	0.885799
chr7	102465742	102465826	102465784	ENSG00000266715.1	+	miRNA	KNOWN	MIR5090	1	1	0.790528
chr7	102471469	102471531	102471500	ENSG00000264471.1	+	miRNA	KNOWN	MIR4467	1	1	1.038221
chr7	102473118	102478907	102476012	ENSG00000005075.15	-	protein_coding	KNOWN	POLR2J	2	4	1.038221
chr7	102480080	102480165	102480122	ENSG00000271745.1	+	miRNA	NOVEL	AC093668.2	1	1	1.038221
chr7	102482445	102517781	102500113	ENSG00000170667.14	-	protein_coding	KNOWN	RASA4B	7	21	0.978301
chr7	102483344	102543764	102513554	ENSG00000272949.1	-	processed_transcript	KNOWN	RP11-514P8.8	1	26	1.009153
chr7	102507203	102507287	102507245	ENSG00000238392.1	-	miRNA	NOVEL	AC093668.1	1	1	0.934796
chr7	102537918	102572656	102555287	ENSG00000168255.19	-	protein_coding	KNOWN	POLR2J3	21	9	1.058850
chr7	102541501	102592444	102566972	ENSG00000270249.1	-	protein_coding	KNOWN	RP11-514P8.7	1	7	0.976881
chr7	102551232	102562308	102556770	ENSG00000205238.9	+	protein_coding	KNOWN	SPDYE2	3	9	1.083031
chr7	102573807	102616757	102595282	ENSG00000105808.17	-	protein_coding	KNOWN	RASA4	17	21	0.945543
chr7	102582523	102642869	102612696	ENSG00000205236.6	-	protein_coding	KNOWN	RP11-514P8.6	1	26	0.989749
chr7	102606366	102606450	102606408	ENSG00000238997.1	-	miRNA	NOVEL	AC105052.1	1	1	1.018782
chr7	102637025	102642791	102639908	ENSG00000267368.1	-	protein_coding	KNOWN	UPK3BL	1	6	1.000276
chr7	102637049	102671641	102654345	ENSG00000267645.5	-	protein_coding	KNOWN	RP11-577H5.5	1	9	0.993548
chr7	102650325	102661398	102655861	ENSG00000173678.14	+	protein_coding	KNOWN	SPDYE2B	3	9	0.993942
chr7	102665368	102671629	102668498	ENSG00000228049.7	-	protein_coding	KNOWN	POLR2J2	2	4	0.978776
chr7	102672879	102678856	102675867	ENSG00000279168.1	-	protein_coding	KNOWN	AC105052.2	1	2	0.935689
chr7	102681836	102690469	102686152	ENSG00000233297.4	-	unprocessed_pseudogene	KNOWN	RASA4DP	1	9	0.931762
chr7	102748971	102809225	102779098	ENSG00000222011.8	+	protein_coding	KNOWN	FAM185A	8	8	-0.136002
chr7	102755146	102755939	102755542	ENSG00000213385.3	+	processed_pseudogene	KNOWN	RP11-577H5.1	1	1	-0.063286
chr7	102813230	103074843	102944036	ENSG00000161040.16	-	protein_coding	KNOWN	FBXL13	12	21	0.131497
chr7	102834605	102834708	102834656	ENSG00000252643.1	+	snRNA	KNOWN	RNU6-1136P	1	1	0.130466
chr7	102857450	102857755	102857602	ENSG00000238324.1	+	misc_RNA	KNOWN	RN7SKP198	1	1	0.139557
chr7	102912991	102944949	102928970	ENSG00000128606.12	+	protein_coding	KNOWN	LRRC17	5	5	0.017152
chr7	102973522	102988856	102981189	ENSG00000230257.1	+	antisense	KNOWN	NFE4	1	4	-0.082613
chr7	103014256	103014355	103014305	ENSG00000264045.1	+	miRNA	NOVEL	AC073127.1	1	1	0.342535
chr7	103030104	103031354	103030729	ENSG00000236226.1	+	antisense	KNOWN	RP11-645N11.3	1	2	-0.048016
chr7	103074881	103099764	103087322	ENSG00000170632.13	+	protein_coding	KNOWN	ARMC10	11	8	0.509817
chr7	103088664	103089610	103089137	ENSG00000233025.1	-	processed_pseudogene	KNOWN	CRYZP1	1	1	0.511617
chr7	103099776	103149560	103124668	ENSG00000161048.11	-	protein_coding	KNOWN	NAPEPLD	10	7	0.250027
chr7	103141349	103141939	103141644	ENSG00000224415.1	-	processed_pseudogene	KNOWN	RP11-401L13.4	1	1	0.159896
chr7	103152007	103152325	103152166	ENSG00000236848.2	-	processed_pseudogene	KNOWN	RPL23AP95	1	2	0.099854
chr7	103161947	103162660	103162303	ENSG00000279482.1	-	TEC	KNOWN	RP11-401L13.7	1	1	0.099854
chr7	103175133	103280410	103227771	ENSG00000170629.14	-	transcribed_unprocessed_pseudogene	KNOWN	DPY19L2P2	6	24	-0.390561
chr7	103262000	103262311	103262155	ENSG00000237632.3	+	processed_pseudogene	KNOWN	S100A11P1	1	1	-0.408437
chr7	103297422	103329511	103313466	ENSG00000105819.13	+	protein_coding	KNOWN	PMPCB	8	13	-0.239329
chr7	103312474	103344873	103328673	ENSG00000105821.14	-	protein_coding	KNOWN	DNAJC2	11	17	-0.128595
chr7	103344254	103369395	103356824	ENSG00000161057.10	+	protein_coding	KNOWN	PSMC2	5	13	0.091992
chr7	103348601	103348771	103348686	ENSG00000235354.1	+	processed_pseudogene	KNOWN	CTA-276O3.4	1	1	0.091992
chr7	103352730	103446177	103399453	ENSG00000170615.14	-	protein_coding	KNOWN	SLC26A5	15	20	-0.094882
chr7	103433461	103433561	103433511	ENSG00000251852.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.302287
chr7	103434994	103435092	103435043	ENSG00000252047.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.302287
chr7	103445207	103514007	103479607	ENSG00000234715.1	+	antisense	KNOWN	CTB-107G13.1	1	4	-0.168665
chr7	103471784	103989516	103730650	ENSG00000189056.13	-	protein_coding	KNOWN	RELN	7	65	-0.293726
chr7	103484208	103484539	103484373	ENSG00000222386.1	-	misc_RNA	KNOWN	RN7SKP86	1	1	-0.262925
chr7	104126341	104208047	104167194	ENSG00000164815.10	-	protein_coding	KNOWN	ORC5	8	15	-0.337642
chr7	104328656	104907232	104617944	ENSG00000187416.11	+	protein_coding	KNOWN	LHFPL3	2	4	-0.228070
chr7	104667749	104669576	104668662	ENSG00000197258.5	+	processed_pseudogene	KNOWN	EIF4BP6	1	1	0.075962
chr7	104738597	104804107	104771352	ENSG00000226869.6	-	processed_transcript	KNOWN	LHFPL3-AS1	7	7	-0.236708
chr7	104762011	104762094	104762052	ENSG00000280478.1	+	miRNA	NOVEL	AC079796.1	1	1	-0.247032
chr7	104826336	104826796	104826566	ENSG00000237606.2	+	processed_pseudogene	KNOWN	RP11-203P23.2	1	1	-0.063286
chr7	104894628	104926645	104910636	ENSG00000225329.3	-	processed_transcript	KNOWN	LHFPL3-AS2	2	5	0.281604
chr7	104911928	104912193	104912060	ENSG00000243352.3	+	misc_RNA	KNOWN	RN7SL8P	1	1	0.290405
chr7	104941063	104962334	104951698	ENSG00000237513.1	+	lincRNA	KNOWN	RP11-325F22.2	2	2	0.225139
chr7	104950315	105013044	104981679	ENSG00000228393.3	-	antisense	KNOWN	LINC01004	2	3	0.387682
chr7	105013425	105014321	105013873	ENSG00000239569.3	-	antisense	KNOWN	KMT2E-AS1	1	2	0.471184
chr7	105014152	105014199	105014175	ENSG00000280574.1	-	miRNA	NOVEL	AC007384.1	1	1	0.471184
chr7	105014179	105114361	105064270	ENSG00000005483.19	+	protein_coding	KNOWN	KMT2E	17	27	0.153478
chr7	105102838	105105483	105104160	ENSG00000272918.1	-	antisense	KNOWN	CTB-152G17.6	1	1	0.313071
chr7	105110704	105399308	105255006	ENSG00000135250.16	-	protein_coding	KNOWN	SRPK2	15	17	0.216143
chr7	105189190	105189814	105189502	ENSG00000270764.1	+	processed_pseudogene	KNOWN	CTB-152G17.5	1	2	-0.098231
chr7	105204600	105204859	105204729	ENSG00000271482.1	+	processed_pseudogene	KNOWN	CTB-152G17.4	1	1	0.278646
chr7	105244652	105244970	105244811	ENSG00000213361.2	+	processed_pseudogene	KNOWN	RP4-778K6.1	1	1	0.060965
chr7	105301522	105302086	105301804	ENSG00000244490.1	+	processed_pseudogene	KNOWN	RWDD4P1	1	1	0.239890
chr7	105304277	105306642	105305459	ENSG00000242154.1	+	antisense	KNOWN	RP4-778K6.3	1	2	0.239890
chr7	105332790	105332896	105332843	ENSG00000201179.1	+	snRNA	KNOWN	RNU6-1322P	1	1	0.453590
chr7	105439661	105522267	105480964	ENSG00000091127.13	-	protein_coding	KNOWN	PUS7	6	17	0.218956
chr7	105530209	105530671	105530440	ENSG00000223886.3	+	processed_pseudogene	KNOWN	RP11-251G23.2	1	1	0.544897
chr7	105532085	105567677	105549881	ENSG00000135249.7	+	protein_coding	KNOWN	RINT1	8	15	0.285406
chr7	105565120	105600875	105582997	ENSG00000185055.10	-	protein_coding	KNOWN	EFCAB10	6	5	0.289684
chr7	105571083	105573660	105572371	ENSG00000272604.1	+	antisense	KNOWN	RP11-251G23.5	1	1	0.433549
chr7	105582258	105583256	105582757	ENSG00000231167.3	-	processed_pseudogene	KNOWN	YBX1P2	1	1	0.433549
chr7	105605067	105876604	105740835	ENSG00000146776.14	-	protein_coding	KNOWN	ATXN7L1	11	12	0.302589
chr7	105819492	105820101	105819796	ENSG00000226624.1	+	processed_pseudogene	KNOWN	CTA-351J1.1	1	1	0.534214
chr7	105876796	106033773	105955284	ENSG00000128536.15	+	protein_coding	KNOWN	CDHR3	14	19	0.150907
chr7	106035798	106036431	106036114	ENSG00000280439.1	+	TEC	KNOWN	RP4-568B10.1	1	1	0.507029
chr7	106090503	106112576	106101539	ENSG00000008282.8	-	protein_coding	KNOWN	SYPL1	7	6	-0.041680
chr7	106125371	106126700	106126035	ENSG00000242562.1	+	processed_pseudogene	KNOWN	DCAF13P1	1	1	0.109914
chr7	106208167	106208267	106208217	ENSG00000201796.1	+	snRNA	KNOWN	RNU6-392P	1	1	0.210433
chr7	106248285	106286326	106267305	ENSG00000105835.11	-	protein_coding	KNOWN	NAMPT	13	11	-0.152946
chr7	106285480	106286326	106285903	ENSG00000273320.1	+	antisense	KNOWN	RP11-22N19.2	1	1	0.000199
chr7	106315225	106315743	106315484	ENSG00000243438.1	+	processed_pseudogene	KNOWN	LARP1BP2	1	1	-0.064127
chr7	106372251	106770207	106571229	ENSG00000243797.6	-	sense_overlapping	KNOWN	CTB-111H14.1	4	5	0.052558
chr7	106570947	106598908	106584927	ENSG00000267052.1	-	lincRNA	KNOWN	CTB-30L5.1	1	3	0.186639
chr7	106656765	106660996	106658880	ENSG00000253276.2	-	protein_coding	KNOWN	CCDC71L	2	3	-0.117236
chr7	106775011	106795564	106785287	ENSG00000228742.9	+	lincRNA	KNOWN	RP5-884M6.1	3	4	0.138959
chr7	106781600	106781715	106781657	ENSG00000251978.1	-	rRNA	KNOWN	RNA5SP236	1	1	0.165992
chr7	106865278	106907145	106886211	ENSG00000105851.10	+	protein_coding	KNOWN	PIK3CG	5	11	-0.070948
chr7	107044649	107161811	107103230	ENSG00000005249.12	+	protein_coding	KNOWN	PRKAR2B	3	11	-0.178516
chr7	107066591	107133733	107100162	ENSG00000243193.4	-	processed_transcript	KNOWN	CTA-360L10.1	6	4	-0.122661
chr7	107168961	107202529	107185745	ENSG00000105856.13	+	protein_coding	KNOWN	HBP1	15	12	-0.089160
chr7	107192559	107193300	107192929	ENSG00000272072.1	-	antisense	KNOWN	CTA-363E19.2	1	1	-0.221166
chr7	107201555	107564514	107383034	ENSG00000164597.13	-	protein_coding	KNOWN	COG5	10	22	-0.103737
chr7	107294885	107294951	107294918	ENSG00000221356.1	+	miRNA	NOVEL	AC004492.1	1	1	-0.373672
chr7	107450083	107450362	107450222	ENSG00000228341.1	+	processed_pseudogene	KNOWN	CTB-20D2.1	1	1	0.024485
chr7	107470018	107475659	107472838	ENSG00000172209.5	+	protein_coding	KNOWN	GPR22	3	3	-0.260525
chr7	107563484	107578464	107570974	ENSG00000105865.10	+	protein_coding	KNOWN	DUS4L	11	8	-0.057976
chr7	107579557	107580057	107579807	ENSG00000272854.1	-	antisense	KNOWN	RP4-593H12.1	1	1	-0.140051
chr7	107579977	107629170	107604573	ENSG00000075790.10	+	protein_coding	KNOWN	BCAP29	17	9	-0.076298
chr7	107603363	107603507	107603435	ENSG00000238832.1	+	snoRNA	NOVEL	snoU109	1	1	-0.262117
chr7	107628553	107629498	107629025	ENSG00000250474.1	+	processed_pseudogene	KNOWN	WBP1LP2	1	1	0.150885
chr7	107642765	107643023	107642894	ENSG00000225935.1	-	processed_pseudogene	KNOWN	BANF1P5	1	1	0.167149
chr7	107653968	107662151	107658059	ENSG00000233705.6	-	antisense	KNOWN	SLC26A4-AS1	8	5	0.123356
chr7	107660635	107717809	107689222	ENSG00000091137.11	+	protein_coding	KNOWN	SLC26A4	7	21	0.009678
chr7	107742817	107744581	107743699	ENSG00000241764.3	-	antisense	KNOWN	AC002467.7	3	2	0.060628
chr7	107743697	107761667	107752682	ENSG00000105879.11	+	protein_coding	KNOWN	CBLL1	8	7	-0.049608
chr7	107765467	107803225	107784346	ENSG00000091138.12	-	protein_coding	KNOWN	SLC26A3	5	21	-0.230976
chr7	107808734	107809568	107809151	ENSG00000229626.1	+	processed_pseudogene	KNOWN	PIGCP2	1	1	-0.316093
chr7	107890970	107931730	107911350	ENSG00000091140.12	+	protein_coding	KNOWN	DLD	13	15	-0.120010
chr7	107923799	108003255	107963527	ENSG00000091136.13	-	protein_coding	KNOWN	LAMB1	13	34	0.197273
chr7	107942116	107942740	107942428	ENSG00000273055.1	+	antisense	KNOWN	CTB-13F3.1	1	1	0.047869
chr7	107999791	107999982	107999886	ENSG00000238297.2	-	snoRNA	NOVEL	U3	1	1	0.379888
chr7	108023548	108130356	108076952	ENSG00000091128.12	-	protein_coding	KNOWN	LAMB4	8	34	0.010390
chr7	108036846	108036936	108036891	ENSG00000216085.1	-	miRNA	NOVEL	AC005048.1	1	1	0.083864
chr7	108147623	108456717	108302170	ENSG00000091129.19	-	protein_coding	KNOWN	NRCAM	17	33	-0.224568
chr7	108271000	108271061	108271030	ENSG00000251712.2	+	snRNA	KNOWN	RNU7-20P	1	1	-0.091608
chr7	108358307	108358405	108358356	ENSG00000266112.1	+	miRNA	NOVEL	AC007567.1	1	1	0.137221
chr7	108470422	108569666	108520044	ENSG00000135241.16	-	protein_coding	KNOWN	PNPLA8	12	12	-0.054502
chr7	108510233	108510976	108510604	ENSG00000231006.1	+	processed_pseudogene	KNOWN	RPL7P32	1	1	0.123019
chr7	108554543	108569750	108562146	ENSG00000177683.13	-	protein_coding	KNOWN	THAP5	8	4	-0.101780
chr7	108569568	108574850	108572209	ENSG00000128590.4	+	protein_coding	KNOWN	DNAJB9	3	3	-0.150587
chr7	108598375	108614267	108606321	ENSG00000225647.1	+	lincRNA	KNOWN	AC005487.2	1	4	-0.369523
chr7	108720608	108721601	108721104	ENSG00000270425.1	-	processed_pseudogene	KNOWN	CTA-369K23.1	1	1	-0.722976
chr7	108883975	108884587	108884281	ENSG00000205174.4	-	lincRNA	KNOWN	C7orf66	1	2	-0.378755
chr7	108900105	108905226	108902665	ENSG00000279043.1	-	TEC	KNOWN	CTB-22K14.1	1	1	-0.696504
chr7	108909453	108952666	108931059	ENSG00000229603.1	+	lincRNA	KNOWN	AC004014.3	1	4	-0.433730
chr7	108994031	108995029	108994530	ENSG00000227968.1	-	processed_pseudogene	KNOWN	BUB3P1	1	1	-0.514094
chr7	109322320	109326315	109324317	ENSG00000230941.1	-	lincRNA	KNOWN	AC002386.1	1	2	-0.659695
chr7	109521981	109597166	109559573	ENSG00000234273.1	-	lincRNA	KNOWN	AC073071.1	1	4	-0.608098
chr7	109660094	109660802	109660448	ENSG00000230192.1	+	processed_pseudogene	KNOWN	AC073387.2	1	1	-0.417957
chr7	109763574	109764357	109763965	ENSG00000271368.1	+	processed_pseudogene	KNOWN	RP11-10E6.1	1	1	-0.565120
chr7	109959218	109960184	109959701	ENSG00000237064.1	-	processed_pseudogene	KNOWN	EIF3IP1	1	1	-0.424799
chr7	109998434	109999624	109999029	ENSG00000232199.1	-	processed_pseudogene	KNOWN	RPL3P8	1	1	-0.393435
chr7	110215891	110216380	110216135	ENSG00000278424.1	+	unprocessed_pseudogene	KNOWN	RP11-745H7.1	1	1	0.062448
chr7	110432239	110534754	110483496	ENSG00000226965.1	-	lincRNA	KNOWN	AC003088.1	1	5	-0.204204
chr7	110663051	111562517	111112784	ENSG00000184903.9	-	protein_coding	KNOWN	IMMP2L	10	7	-0.259168
chr7	110724159	110725825	110724992	ENSG00000228540.1	-	sense_intronic	KNOWN	AC073326.3	1	2	-0.444441
chr7	111091006	111125454	111108230	ENSG00000173114.12	+	protein_coding	KNOWN	LRRN3	5	4	-0.252277
chr7	111394875	111395043	111394959	ENSG00000243621.1	+	processed_pseudogene	KNOWN	AC003989.3	1	1	-0.311905
chr7	111411319	111411883	111411601	ENSG00000227948.4	+	processed_pseudogene	KNOWN	AC003989.4	1	1	-0.408906
chr7	111726110	112206411	111966260	ENSG00000128512.19	-	protein_coding	KNOWN	DOCK4	17	53	-0.264241
chr7	111808516	111821773	111815144	ENSG00000225572.1	+	antisense	KNOWN	DOCK4-AS1	1	2	-0.171707
chr7	111953653	111953765	111953709	ENSG00000222346.1	-	rRNA	KNOWN	RNA5SP237	1	1	-0.313768
chr7	111971222	111971988	111971605	ENSG00000234358.1	-	processed_pseudogene	KNOWN	AC003080.4	1	1	-0.096865
chr7	112206588	112343096	112274842	ENSG00000198839.9	+	protein_coding	KNOWN	ZNF277	7	12	-0.137981
chr7	112288623	112288952	112288787	ENSG00000202406.1	+	misc_RNA	KNOWN	RN7SKP187	1	1	-0.232206
chr7	112328189	112409623	112368906	ENSG00000226851.1	-	antisense	KNOWN	AC004112.4	2	4	-0.092630
chr7	112372647	112373729	112373188	ENSG00000230999.1	+	unprocessed_pseudogene	KNOWN	MTND5P8	1	1	0.161533
chr7	112373733	112374250	112373991	ENSG00000232922.1	-	unprocessed_pseudogene	KNOWN	MTND6P24	1	1	0.161533
chr7	112374324	112375429	112374876	ENSG00000236232.1	+	unprocessed_pseudogene	KNOWN	MTCYBP24	1	1	0.161533
chr7	112422968	112481017	112451992	ENSG00000006652.13	+	protein_coding	KNOWN	IFRD1	17	13	0.007588
chr7	112446164	112446375	112446269	ENSG00000180019.5	-	processed_pseudogene	KNOWN	AC079741.2	1	1	0.004529
chr7	112480853	112491062	112485957	ENSG00000181016.9	+	protein_coding	KNOWN	LSMEM1	5	6	0.171282
chr7	112520488	112521670	112521079	ENSG00000182965.6	+	processed_pseudogene	KNOWN	NPM1P14	1	2	-0.101689
chr7	112622378	112708080	112665229	ENSG00000223646.1	+	lincRNA	KNOWN	AC002463.3	1	8	-0.382267
chr7	112735166	112738693	112736929	ENSG00000225358.1	-	processed_pseudogene	KNOWN	MIPEPP1	1	2	-0.694413
chr7	112762382	112790592	112776487	ENSG00000146802.12	-	protein_coding	KNOWN	TMEM168	7	6	-0.582541
chr7	112819147	112939916	112879531	ENSG00000164603.11	-	protein_coding	KNOWN	C7orf60	3	6	-0.387092
chr7	112954646	112995634	112975140	ENSG00000234520.5	-	lincRNA	KNOWN	HRAT17	2	6	-0.285735
chr7	113075124	113077181	113076152	ENSG00000279288.1	-	TEC	KNOWN	RP11-736E3.3	1	1	-0.434756
chr7	113078331	113087778	113083054	ENSG00000164604.12	-	protein_coding	KNOWN	GPR85	7	3	-0.434756
chr7	113100663	113146330	113123496	ENSG00000225457.1	+	processed_transcript	KNOWN	RP11-736E3.1	2	3	-0.265123
chr7	113116718	113118613	113117665	ENSG00000214194.8	-	lincRNA	KNOWN	LINC00998	4	3	-0.223695
chr7	113345470	113345580	113345525	ENSG00000277061.1	+	miRNA	NOVEL	AC073137.1	1	1	-0.067880
chr7	113415689	113416322	113416005	ENSG00000270997.1	+	processed_pseudogene	KNOWN	RP11-703P11.1	1	1	-0.569592
chr7	113451072	113451402	113451237	ENSG00000278894.1	+	TEC	KNOWN	RP11-786A20.1	1	1	-0.458561
chr7	113876777	114075920	113976348	ENSG00000154415.7	-	protein_coding	KNOWN	PPP1R3A	3	5	-0.475179
chr7	114086327	114693772	114390049	ENSG00000128573.23	+	protein_coding	KNOWN	FOXP2	26	23	-0.557330
chr7	114297114	114297429	114297271	ENSG00000236580.1	-	processed_pseudogene	KNOWN	RP11-95P9.1	1	1	-0.553577
chr7	114414244	114419875	114417059	ENSG00000224595.1	-	antisense	KNOWN	AC073626.2	1	2	-0.798597
chr7	114560961	114561517	114561239	ENSG00000282859.1	+	sense_intronic	KNOWN	CTA-250D13.1	1	1	-0.771272
chr7	114613787	114613906	114613846	ENSG00000202334.1	-	rRNA	KNOWN	RNA5SP238	1	1	-0.915581
chr7	114629855	114629956	114629905	ENSG00000266229.1	+	miRNA	NOVEL	AC020606.1	1	1	-0.915581
chr7	114653345	114653455	114653400	ENSG00000272230.1	+	miRNA	KNOWN	MIR3666	1	1	-0.644974
chr7	114922154	115019916	114971035	ENSG00000135272.9	+	protein_coding	KNOWN	MDFIC	8	5	-0.036095
chr7	115061537	115231355	115146446	ENSG00000233607.1	-	lincRNA	KNOWN	LINC01392	1	6	-0.288997
chr7	115078958	115126314	115102636	ENSG00000225535.6	+	lincRNA	KNOWN	LINC01393	4	5	-0.307438
chr7	115136475	115137220	115136847	ENSG00000226962.1	-	processed_pseudogene	KNOWN	RAC1P6	1	3	-0.136036
chr7	115207894	115207996	115207945	ENSG00000199764.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.611615
chr7	115503367	115504081	115503724	ENSG00000244565.1	+	processed_pseudogene	KNOWN	RP11-222O23.1	1	2	-0.737124
chr7	115581315	115581442	115581378	ENSG00000202377.1	-	snoRNA	NOVEL	SNORA25	1	1	-0.128777
chr7	115647461	115676329	115661895	ENSG00000242072.1	-	lincRNA	KNOWN	RP11-458K10.1	1	2	-0.452756
chr7	115679345	115682618	115680981	ENSG00000240973.1	-	lincRNA	KNOWN	RP11-458K10.2	1	2	-0.236845
chr7	115789729	115791049	115790389	ENSG00000243345.1	+	lincRNA	KNOWN	RP11-458K10.3	1	3	-0.228915
chr7	115833273	115833373	115833323	ENSG00000199224.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.421348
chr7	115935148	116159896	116047522	ENSG00000105967.15	-	protein_coding	KNOWN	TFEC	9	9	-0.434964
chr7	116209234	116211511	116210372	ENSG00000279086.1	-	TEC	KNOWN	RP11-667F14.1	1	1	0.046040
chr7	116210493	116258783	116234638	ENSG00000135269.17	+	protein_coding	KNOWN	TES	11	7	0.011616
chr7	116237929	116327896	116282912	ENSG00000243243.5	-	antisense	KNOWN	AC073130.3	2	5	0.033925
chr7	116238260	116499465	116368862	ENSG00000237813.3	-	antisense	KNOWN	AC002066.1	2	5	0.055933
chr7	116248600	116249422	116249011	ENSG00000281656.1	-	protein_coding	KNOWN	AC073130.2	1	2	-0.020035
chr7	116275606	116286734	116281170	ENSG00000237870.6	-	processed_transcript	KNOWN	AC073130.1	4	4	0.065025
chr7	116287380	116508541	116397960	ENSG00000105971.14	+	protein_coding	KNOWN	CAV2	15	14	0.061351
chr7	116320751	116321031	116320891	ENSG00000213167.3	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.032753
chr7	116524785	116561184	116542984	ENSG00000105974.11	+	protein_coding	KNOWN	CAV1	9	3	0.469014
chr7	116542718	116551969	116547343	ENSG00000235427.1	-	antisense	KNOWN	AC006159.5	1	2	0.615200
chr7	116563594	116571234	116567414	ENSG00000243220.1	-	antisense	KNOWN	AC006159.4	1	2	0.156352
chr7	116570960	116614820	116592890	ENSG00000231210.2	-	lincRNA	KNOWN	LINC01510	3	3	0.088568
chr7	116672390	116798386	116735388	ENSG00000105976.14	+	protein_coding	KNOWN	MET	7	21	0.072546
chr7	116811070	116922049	116866559	ENSG00000198898.12	+	protein_coding	KNOWN	CAPZA2	14	10	0.076136
chr7	116873454	116876376	116874915	ENSG00000235945.1	-	processed_pseudogene	KNOWN	AC002543.2	1	4	0.419286
chr7	116909877	116909964	116909920	ENSG00000252115.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.058044
chr7	116944286	116944414	116944350	ENSG00000222150.1	-	rRNA	KNOWN	RNA5SP239	1	1	0.219606
chr7	116952446	116954334	116953390	ENSG00000227199.1	-	antisense	KNOWN	ST7-AS1	1	1	0.290405
chr7	116952698	116952813	116952755	ENSG00000275359.1	+	misc_RNA	NOVEL	ST7-AS1_1	1	1	0.290405
chr7	116953214	116953324	116953269	ENSG00000277583.1	+	misc_RNA	NOVEL	ST7-AS1_2	1	1	0.290405
chr7	116953238	117230103	117091670	ENSG00000004866.18	+	protein_coding	KNOWN	ST7	30	16	-0.009488
chr7	116953899	117098806	117026352	ENSG00000214188.9	+	sense_intronic	KNOWN	ST7-OT4	6	5	0.036853
chr7	116954480	116954679	116954579	ENSG00000273596.1	+	misc_RNA	NOVEL	ST7-OT4_1	1	1	0.290405
chr7	116954983	116955154	116955068	ENSG00000273571.1	+	misc_RNA	NOVEL	ST7-OT4_2	1	1	0.290405
chr7	116956431	116956723	116956577	ENSG00000276100.1	+	misc_RNA	NOVEL	ST7-OT4_3	1	1	0.290405
chr7	116959593	116959805	116959699	ENSG00000274606.1	+	misc_RNA	NOVEL	ST7-OT4_4	1	1	0.290405
chr7	116965846	116967472	116966659	ENSG00000228368.1	-	antisense	KNOWN	AC106873.4	1	2	0.290405
chr7	116972165	116972911	116972538	ENSG00000213050.5	-	processed_pseudogene	KNOWN	TPM3P1	1	1	0.462175
chr7	117020211	117020319	117020265	ENSG00000275870.1	+	miRNA	KNOWN	MIR6132	1	1	-0.291012
chr7	117072072	117146480	117109276	ENSG00000226367.5	-	antisense	KNOWN	ST7-AS2	6	6	-0.163432
chr7	117117912	117117983	117117947	ENSG00000274344.1	+	misc_RNA	NOVEL	ST7-AS2_1	1	1	0.040766
chr7	117184126	117184199	117184162	ENSG00000275054.1	+	misc_RNA	NOVEL	ST7-OT3_1	1	1	0.137795
chr7	117187548	117187740	117187644	ENSG00000227532.1	-	processed_pseudogene	KNOWN	AC002542.2	1	1	0.137795
chr7	117190133	117190269	117190201	ENSG00000278526.1	+	misc_RNA	NOVEL	ST7-OT3_2	1	1	-0.074827
chr7	117191647	117191761	117191704	ENSG00000278482.1	+	misc_RNA	NOVEL	ST7-OT3_3	1	1	-0.074827
chr7	117262918	117264888	117263903	ENSG00000230785.2	-	processed_pseudogene	KNOWN	AC006326.3	1	2	0.336299
chr7	117263917	117264388	117264152	ENSG00000224042.2	+	processed_pseudogene	KNOWN	MTND4P6	1	1	0.336299
chr7	117264393	117264530	117264461	ENSG00000230605.1	-	processed_pseudogene	KNOWN	MTCYBP6	1	1	0.336299
chr7	117276631	117323289	117299960	ENSG00000105989.8	-	protein_coding	KNOWN	WNT2	4	5	0.080573
chr7	117300861	117322236	117311548	ENSG00000238202.1	+	antisense	KNOWN	AC002465.2	1	2	0.011783
chr7	117363222	117428123	117395672	ENSG00000154438.7	-	protein_coding	KNOWN	ASZ1	6	13	-0.440902
chr7	117439982	117440780	117440381	ENSG00000214684.2	-	processed_pseudogene	KNOWN	AC003045.1	1	2	-0.289315
chr7	117465784	117715971	117590877	ENSG00000001626.14	+	protein_coding	KNOWN	CFTR	11	27	-0.481136
chr7	117487737	117487929	117487833	ENSG00000237974.1	+	processed_pseudogene	KNOWN	AC000111.4	1	1	-0.186110
chr7	117560733	117564676	117562704	ENSG00000232661.1	-	antisense	KNOWN	AC000111.3	1	2	-0.615226
chr7	117586207	117586416	117586311	ENSG00000234001.1	-	processed_pseudogene	KNOWN	AC000111.5	1	1	-0.990470
chr7	117604791	117647415	117626103	ENSG00000083622.8	-	antisense	KNOWN	AC000111.6	1	3	-0.501533
chr7	117710651	117874139	117792395	ENSG00000077063.10	-	protein_coding	KNOWN	CTTNBP2	12	23	-0.335807
chr7	117882859	117883675	117883267	ENSG00000224136.1	+	processed_pseudogene	KNOWN	AC007568.1	1	2	-0.211400
chr7	117998858	118004045	118001451	ENSG00000234826.1	-	lincRNA	KNOWN	AC003084.2	1	3	-0.390509
chr7	118184032	118192824	118188428	ENSG00000128534.7	+	protein_coding	KNOWN	LSM8	4	4	-0.519455
chr7	118214669	118496171	118355420	ENSG00000106013.13	+	protein_coding	KNOWN	ANKRD7	8	16	-0.545516
chr7	118462499	118462594	118462546	ENSG00000222226.1	+	miRNA	NOVEL	AC006926.1	1	1	-0.524680
chr7	118880103	118881288	118880695	ENSG00000229982.1	-	processed_pseudogene	KNOWN	GTF3AP6	1	2	-0.426040
chr7	118950386	118951259	118950822	ENSG00000230520.1	-	processed_pseudogene	KNOWN	RP11-533K11.1	1	1	-0.434077
chr7	119178177	119179149	119178663	ENSG00000270516.1	-	processed_pseudogene	KNOWN	RP11-500M10.1	1	1	-0.952402
chr7	119484325	119484409	119484367	ENSG00000263692.1	-	miRNA	NOVEL	AC091320.1	1	1	-1.104809
chr7	119704556	119907375	119805965	ENSG00000225546.5	-	lincRNA	KNOWN	RP11-328J2.1	2	4	-0.731065
chr7	120005976	120006101	120006038	ENSG00000271739.1	-	snRNA	KNOWN	RNU1-29P	1	1	-0.338643
chr7	120009634	120009701	120009667	ENSG00000276899.1	-	miRNA	NOVEL	AC004915.1	1	1	-0.338643
chr7	120141016	120142996	120142006	ENSG00000233417.1	-	lincRNA	KNOWN	RP4-742N3.1	1	2	-0.959234
chr7	120168345	120186064	120177204	ENSG00000233969.1	+	lincRNA	KNOWN	RP5-1006K12.1	1	3	-0.572003
chr7	120182534	120182599	120182566	ENSG00000281290.1	-	miRNA	NOVEL	AC004946.1	1	1	-0.576802
chr7	120273668	120750331	120511999	ENSG00000184408.9	+	protein_coding	KNOWN	KCND2	3	6	-0.616904
chr7	120672871	120672975	120672923	ENSG00000252023.1	+	snRNA	KNOWN	RNU6-581P	1	1	-0.752357
chr7	120746738	120752514	120749626	ENSG00000231295.1	-	antisense	KNOWN	RP4-797C5.2	1	3	-0.478264
chr7	120787320	120858402	120822861	ENSG00000106025.8	-	protein_coding	KNOWN	TSPAN12	7	9	-0.481521
chr7	120950749	120977216	120963982	ENSG00000071243.15	+	protein_coding	KNOWN	ING3	6	12	-0.197108
chr7	120981426	120981553	120981489	ENSG00000202225.1	-	rRNA	KNOWN	RNA5SP240	1	1	-0.198523
chr7	120988677	121297444	121143060	ENSG00000106034.17	+	protein_coding	KNOWN	CPED1	10	23	-0.164180
chr7	121050927	121051203	121051065	ENSG00000234927.1	+	processed_pseudogene	KNOWN	HMGN1P18	1	1	-0.057064
chr7	121083700	121083813	121083756	ENSG00000212628.1	-	rRNA	KNOWN	RNA5SP241	1	1	-0.043523
chr7	121194948	121195057	121195002	ENSG00000207090.1	-	snRNA	KNOWN	RNU6-517P	1	1	-0.634724
chr7	121325367	121341104	121333235	ENSG00000002745.12	+	protein_coding	KNOWN	WNT16	2	4	0.163134
chr7	121348851	121396364	121372607	ENSG00000196937.10	-	protein_coding	KNOWN	FAM3C	5	10	-0.192218
chr7	121398452	121398767	121398609	ENSG00000213310.3	+	processed_pseudogene	KNOWN	CYCSP19	1	1	0.042410
chr7	121419072	121419845	121419458	ENSG00000227371.1	+	processed_pseudogene	KNOWN	RP11-3L10.2	1	2	-0.325735
chr7	121440834	121441261	121441047	ENSG00000234985.2	-	processed_pseudogene	KNOWN	RP11-3L10.3	1	1	-0.178311
chr7	121574669	121574754	121574711	ENSG00000221690.1	-	miRNA	NOVEL	AC004875.1	1	1	-0.116250
chr7	121643334	121650360	121646847	ENSG00000227743.1	-	lincRNA	KNOWN	RP4-745K6.1	1	3	-0.328088
chr7	121736443	121736725	121736584	ENSG00000252704.1	+	misc_RNA	KNOWN	RN7SKP277	1	1	-0.496752
chr7	121842368	121845131	121843749	ENSG00000233272.1	-	processed_pseudogene	KNOWN	PNPT1P2	1	4	-0.519236
chr7	121873089	122062036	121967562	ENSG00000106278.11	+	protein_coding	KNOWN	PTPRZ1	9	30	-0.619499
chr7	122075647	122144280	122109963	ENSG00000008311.14	-	protein_coding	KNOWN	AASS	7	24	-0.405410
chr7	122081720	122081781	122081750	ENSG00000252003.1	+	snRNA	KNOWN	RNU7-154P	1	1	-0.345072
chr7	122159300	122162243	122160771	ENSG00000226636.1	+	processed_pseudogene	KNOWN	RP5-1049N15.2	1	3	0.081723
chr7	122216347	122218437	122217392	ENSG00000234418.1	+	lincRNA	KNOWN	RP11-560I19.1	1	3	0.129960
chr7	122234531	122234903	122234717	ENSG00000213302.3	+	processed_pseudogene	KNOWN	RP11-560I19.2	1	1	-0.386929
chr7	122301394	122310691	122306042	ENSG00000128610.11	-	protein_coding	KNOWN	FEZF1	3	5	-0.027791
chr7	122303658	122310077	122306867	ENSG00000230316.6	+	antisense	KNOWN	FEZF1-AS1	3	7	-0.034754
chr7	122318425	122886759	122602592	ENSG00000081803.15	-	protein_coding	KNOWN	CADPS2	8	30	-0.500380
chr7	122328469	122440388	122384428	ENSG00000240499.7	+	antisense	KNOWN	RP5-1101C3.1	19	6	-0.488142
chr7	122676580	122676811	122676695	ENSG00000225795.1	+	processed_pseudogene	KNOWN	RP11-395G17.1	1	1	-0.528420
chr7	122681315	122681662	122681488	ENSG00000235459.5	+	processed_pseudogene	KNOWN	RPS26P31	1	1	-0.528420
chr7	122697712	122699156	122698434	ENSG00000188050.2	-	protein_coding	KNOWN	RNF133	1	1	-0.236062
chr7	122701664	122702967	122702315	ENSG00000235631.1	-	protein_coding	KNOWN	RNF148	2	3	-0.236062
chr7	122849746	122850352	122850049	ENSG00000227573.2	+	processed_pseudogene	KNOWN	RP5-1166A24.1	1	1	-0.308685
chr7	122994704	122995700	122995202	ENSG00000128519.3	-	protein_coding	KNOWN	TAS2R16	1	1	-0.702148
chr7	123069249	123103589	123086419	ENSG00000226680.2	-	lincRNA	KNOWN	RP11-61D3.1	1	4	-0.547112
chr7	123113531	123199986	123156758	ENSG00000081800.8	-	protein_coding	KNOWN	SLC13A1	4	18	-0.447043
chr7	123230120	123230741	123230430	ENSG00000223595.1	-	processed_pseudogene	KNOWN	LYPLA1P1	1	1	-0.368643
chr7	123452400	123535077	123493738	ENSG00000164675.10	-	protein_coding	KNOWN	IQUB	6	14	-0.526726
chr7	123456629	123459856	123458242	ENSG00000232524.1	+	antisense	KNOWN	RP11-332K15.1	1	3	-0.660081
chr7	123457988	123458094	123458041	ENSG00000207338.1	-	snRNA	KNOWN	RNU6-296P	1	1	-0.660081
chr7	123536997	123558255	123547626	ENSG00000128609.14	-	protein_coding	KNOWN	NDUFA5	12	6	-0.240930
chr7	123567010	123639481	123603245	ENSG00000146809.12	+	protein_coding	KNOWN	ASB15	7	14	-0.380134
chr7	123584859	123624957	123604908	ENSG00000230442.5	-	antisense	KNOWN	RP11-390E23.3	5	5	-0.471057
chr7	123655807	123664290	123660048	ENSG00000170807.11	+	protein_coding	KNOWN	LMOD2	2	3	-0.277846
chr7	123681935	123749067	123715501	ENSG00000106299.7	-	protein_coding	KNOWN	WASL	1	11	-0.331406
chr7	123749068	123751166	123750117	ENSG00000272686.1	+	antisense	KNOWN	RP11-390E23.6	1	1	-0.245486
chr7	123790605	123790711	123790658	ENSG00000201104.1	-	snRNA	KNOWN	RNU6-11P	1	1	-0.517335
chr7	123814139	123829252	123821695	ENSG00000228211.2	+	unitary_pseudogene	KNOWN	HYALP1	1	3	-0.409829
chr7	123828983	123877478	123853230	ENSG00000106302.9	+	protein_coding	KNOWN	HYAL4	5	5	-0.216203
chr7	123925237	123971414	123948325	ENSG00000106304.15	+	protein_coding	KNOWN	SPAM1	6	7	-0.327733
chr7	123932132	123932459	123932295	ENSG00000225583.1	+	processed_pseudogene	KNOWN	RP4-630C24.1	1	1	-0.234509
chr7	123994622	124027659	124011140	ENSG00000241345.1	+	antisense	KNOWN	RP4-630C24.3	2	5	-0.401334
chr7	124030916	124033023	124031969	ENSG00000234224.2	-	protein_coding	KNOWN	TMEM229A	1	1	-0.356282
chr7	124032205	124395118	124213661	ENSG00000242593.5	+	antisense	KNOWN	RP5-921G16.1	2	9	-0.568249
chr7	124274679	124287544	124281111	ENSG00000243574.1	-	lincRNA	KNOWN	RP11-264K23.1	1	2	-0.514094
chr7	124337380	124349860	124343620	ENSG00000241324.1	-	lincRNA	KNOWN	RP5-921G16.2	1	3	-0.798597
chr7	124476371	124476955	124476663	ENSG00000230268.3	+	processed_pseudogene	KNOWN	SSU72P8	1	1	-0.378087
chr7	124480524	124481395	124480959	ENSG00000213296.4	+	processed_pseudogene	KNOWN	RP5-1106E3.1	1	1	-0.378087
chr7	124647719	124647822	124647770	ENSG00000207214.1	+	snRNA	KNOWN	RNU6-102P	1	1	-0.293501
chr7	124742312	124745017	124743664	ENSG00000279419.1	-	TEC	KNOWN	RP5-907C10.3	1	1	-0.229936
chr7	124745997	124765627	124755812	ENSG00000170775.2	-	protein_coding	KNOWN	GPR37	1	2	-0.329875
chr7	124777292	124790689	124783990	ENSG00000275356.3	-	protein_coding	KNOWN	C7orf77	1	4	-0.528911
chr7	124822386	124929983	124876184	ENSG00000128513.14	-	protein_coding	KNOWN	POT1	19	19	-0.507509
chr7	124929873	125179315	125054594	ENSG00000224897.6	+	antisense	KNOWN	POT1-AS1	5	11	-0.519855
chr7	125033453	125035301	125034377	ENSG00000186676.3	+	processed_pseudogene	KNOWN	EEF1GP1	1	3	-0.354616
chr7	125151326	125153611	125152468	ENSG00000224899.1	-	lincRNA	KNOWN	RP11-3B12.5	1	2	-1.209178
chr7	125159974	125160547	125160260	ENSG00000205898.3	-	processed_pseudogene	KNOWN	RP11-3B12.4	1	1	-1.209178
chr7	125172218	125379321	125275769	ENSG00000237764.2	+	lincRNA	KNOWN	RP11-3B12.2	1	10	-0.528652
chr7	125229579	125264291	125246935	ENSG00000219445.2	-	lincRNA	KNOWN	RP11-3B12.3	1	5	-0.585234
chr7	125300504	125300878	125300691	ENSG00000213291.3	-	processed_pseudogene	KNOWN	RP11-420H19.3	1	1	-0.539857
chr7	125344969	125345377	125345173	ENSG00000234071.1	+	processed_pseudogene	KNOWN	RP11-420H19.1	1	1	-0.826478
chr7	125345825	125346197	125346011	ENSG00000227847.1	+	processed_pseudogene	KNOWN	RP11-420H19.2	1	1	-0.826478
chr7	125431347	125466401	125448874	ENSG00000227869.1	+	lincRNA	KNOWN	RP11-807H17.1	3	3	-0.601181
chr7	125917871	125933832	125925851	ENSG00000197462.3	+	lincRNA	KNOWN	AC005276.1	1	5	-0.322407
chr7	126040229	126040300	126040264	ENSG00000221418.1	+	miRNA	NOVEL	AC003968.1	1	1	-0.814899
chr7	126378970	126424185	126401577	ENSG00000241921.1	+	antisense	KNOWN	AC000370.2	1	7	-0.537689
chr7	126438598	127253294	126845946	ENSG00000179603.17	-	protein_coding	KNOWN	GRM8	15	12	-0.471002
chr7	126511135	126512879	126512007	ENSG00000227249.1	+	processed_pseudogene	KNOWN	AC000374.1	1	1	-0.512870
chr7	126868767	126870532	126869649	ENSG00000224981.1	-	processed_pseudogene	KNOWN	AC000367.1	1	1	-0.479539
chr7	126980967	126981778	126981372	ENSG00000230820.2	+	processed_pseudogene	KNOWN	AC000362.1	1	2	-0.715363
chr7	127058079	127058187	127058133	ENSG00000207692.2	-	miRNA	KNOWN	MIR592	1	1	-0.527186
chr7	127120442	127120546	127120494	ENSG00000280995.1	-	miRNA	NOVEL	AC000354.1	1	1	-0.423708
chr7	127215127	127229921	127222524	ENSG00000236340.5	+	antisense	KNOWN	AC000099.1	2	3	-0.205394
chr7	127295620	127296203	127295911	ENSG00000236105.1	+	processed_pseudogene	KNOWN	PRELID3BP10	1	1	-0.593575
chr7	127346790	127431924	127389357	ENSG00000048405.9	-	protein_coding	KNOWN	ZNF800	8	6	-0.241112
chr7	127349833	127350293	127350063	ENSG00000279265.1	-	TEC	KNOWN	AC000123.3	1	1	-0.102586
chr7	127350128	127351523	127350825	ENSG00000224138.1	+	antisense	KNOWN	AC000123.4	1	2	-0.105045
chr7	127359785	127364759	127362272	ENSG00000280347.1	-	TEC	KNOWN	AC000123.2	1	1	-0.105045
chr7	127476883	127485804	127481343	ENSG00000226770.1	+	lincRNA	KNOWN	AC000124.1	1	4	-0.361726
chr7	127580618	127593611	127587114	ENSG00000179562.2	-	protein_coding	KNOWN	GCC1	3	4	0.168707
chr7	127588345	127591705	127590025	ENSG00000004059.10	+	protein_coding	KNOWN	ARF5	6	6	0.194845
chr7	127591409	127602144	127596776	ENSG00000106328.9	+	protein_coding	KNOWN	FSCN3	5	7	0.250849
chr7	127610292	127615928	127613110	ENSG00000106331.14	-	protein_coding	KNOWN	PAX4	7	11	0.261086
chr7	127644685	127652012	127648348	ENSG00000240790.1	-	antisense	KNOWN	AC073934.6	1	3	0.283824
chr7	127652180	128092609	127872394	ENSG00000197157.10	+	protein_coding	KNOWN	SND1	16	24	0.231761
chr7	127857852	127858488	127858170	ENSG00000240579.1	-	processed_pseudogene	KNOWN	RP11-20L24.1	1	1	0.317995
chr7	127997597	128000077	127998837	ENSG00000279078.1	+	lincRNA	KNOWN	SND1-IT1	1	1	0.302077
chr7	128027071	128032107	128029589	ENSG00000128594.7	-	protein_coding	KNOWN	LRRC4	4	3	0.324505
chr7	128081861	128081960	128081910	ENSG00000207588.1	+	miRNA	KNOWN	MIR593	1	1	0.796167
chr7	128207871	128207943	128207907	ENSG00000207705.1	+	miRNA	KNOWN	MIR129-1	1	1	-0.059252
chr7	128241284	128257628	128249456	ENSG00000174697.4	+	protein_coding	KNOWN	LEP	1	3	0.274262
chr7	128264526	128264889	128264707	ENSG00000272915.1	-	lincRNA	KNOWN	RP11-62J1.4	1	1	0.325401
chr7	128290004	128290091	128290047	ENSG00000221429.1	+	miRNA	NOVEL	AC018635.1	1	1	0.415733
chr7	128297685	128343908	128320796	ENSG00000106344.8	-	protein_coding	KNOWN	RBM28	8	19	0.395744
chr7	128306649	128307678	128307163	ENSG00000242261.1	+	processed_pseudogene	KNOWN	RP11-62J1.3	1	1	0.415733
chr7	128344081	128344142	128344111	ENSG00000238750.1	+	snRNA	KNOWN	RNU7-27P	1	1	0.590332
chr7	128350325	128361685	128356005	ENSG00000224940.8	-	protein_coding	KNOWN	PRRT4	7	6	0.674324
chr7	128392277	128410252	128401264	ENSG00000106348.16	-	protein_coding	KNOWN	IMPDH1	17	17	0.809926
chr7	128433422	128433713	128433567	ENSG00000228700.1	-	processed_pseudogene	KNOWN	RP11-155G14.1	1	1	0.797132
chr7	128441694	128442726	128442210	ENSG00000279916.1	-	protein_coding	KNOWN	AC010655.1	1	3	0.797132
chr7	128443449	128443510	128443479	ENSG00000238590.1	-	snRNA	KNOWN	RNU7-54P	1	1	0.797132
chr7	128455840	128493859	128474849	ENSG00000273184.1	+	processed_transcript	KNOWN	RP11-212P7.3	1	5	0.572753
chr7	128455849	128458418	128457133	ENSG00000135245.9	+	protein_coding	KNOWN	HILPDA	4	2	0.656897
chr7	128455937	128469197	128462567	ENSG00000240758.2	+	processed_transcript	KNOWN	RP11-155G14.6	1	4	0.656897
chr7	128466563	128469171	128467867	ENSG00000272601.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-155G14.5	1	2	0.656897
chr7	128476729	128506602	128491665	ENSG00000165055.15	+	protein_coding	KNOWN	METTL2B	7	9	0.606914
chr7	128483907	128484158	128484032	ENSG00000276988.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.488293
chr7	128524016	128531069	128527542	ENSG00000273270.1	-	lincRNA	KNOWN	RP11-212P7.2	1	1	0.449190
chr7	128533652	128615970	128574811	ENSG00000280828.1	+	unprocessed_pseudogene	KNOWN	RP11-274B21.1	1	9	0.355275
chr7	128570241	128570688	128570464	ENSG00000213280.2	-	processed_pseudogene	KNOWN	RP11-212P7.1	1	1	0.206324
chr7	128574751	128622694	128598722	ENSG00000242588.5	+	processed_transcript	KNOWN	RP11-274B21.14	1	10	0.185879
chr7	128617865	128625905	128621885	ENSG00000281896.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-274B21.13	1	3	0.098878
chr7	128627172	128627275	128627223	ENSG00000223189.1	+	snRNA	KNOWN	RNU6-177P	1	1	0.098878
chr7	128651185	128652334	128651759	ENSG00000243302.3	+	processed_pseudogene	KNOWN	RP11-274B21.2	1	1	0.837273
chr7	128652841	128653243	128653042	ENSG00000230715.3	+	processed_pseudogene	KNOWN	RP11-274B21.4	1	1	0.837273
chr7	128653690	128654019	128653854	ENSG00000229413.2	-	processed_pseudogene	KNOWN	RP11-274B21.12	1	1	0.837273
chr7	128653969	128654722	128654345	ENSG00000243679.1	+	processed_pseudogene	KNOWN	RP11-274B21.3	1	1	0.837273
chr7	128655962	128658791	128657376	ENSG00000281490.1	-	processed_pseudogene	KNOWN	CICP14	1	2	0.837273
chr7	128667043	128668156	128667599	ENSG00000271553.1	+	lincRNA	KNOWN	RP11-274B21.10	1	1	0.837273
chr7	128669087	128669892	128669489	ENSG00000241493.1	-	processed_pseudogene	KNOWN	RP11-274B21.5	1	2	0.837273
chr7	128672288	128687872	128680080	ENSG00000205085.8	+	protein_coding	KNOWN	FAM71F2	6	6	0.542435
chr7	128690451	128691717	128691084	ENSG00000271344.1	+	lincRNA	KNOWN	RP11-274B21.9	1	1	0.380117
chr7	128693450	128693924	128693687	ENSG00000239722.1	+	processed_pseudogene	KNOWN	IMP3P2	1	1	0.380117
chr7	128697439	128697556	128697497	ENSG00000201041.1	+	rRNA	KNOWN	RNA5SP242	1	1	0.380117
chr7	128697710	128697744	128697727	ENSG00000252866.1	+	rRNA	KNOWN	RNA5SP243	1	1	0.380117
chr7	128709061	128731743	128720402	ENSG00000135248.15	+	protein_coding	KNOWN	FAM71F1	9	9	0.538234
chr7	128739292	128771807	128755549	ENSG00000128595.16	+	protein_coding	KNOWN	CALU	6	8	0.420433
chr7	128761338	128761598	128761468	ENSG00000244218.3	+	misc_RNA	KNOWN	RN7SL81P	1	1	0.236763
chr7	128772491	128775790	128774140	ENSG00000128617.2	-	protein_coding	KNOWN	OPN1SW	1	5	0.309897
chr7	128790757	128822132	128806444	ENSG00000128596.16	+	protein_coding	KNOWN	CCDC136	15	18	0.817739
chr7	128830377	128859274	128844825	ENSG00000128591.15	+	protein_coding	KNOWN	FLNC	3	48	1.087164
chr7	128850162	128862626	128856394	ENSG00000242902.1	-	antisense	KNOWN	RP11-309L24.2	1	4	1.375164
chr7	128862451	128910719	128886585	ENSG00000135253.13	-	protein_coding	KNOWN	KCP	8	40	1.026240
chr7	128862826	128865844	128864335	ENSG00000128524.4	+	protein_coding	KNOWN	ATP6V1F	2	3	1.375164
chr7	128866579	128872044	128869311	ENSG00000272899.2	+	lincRNA	KNOWN	RP11-309L24.4	1	2	1.264388
chr7	128906772	128906890	128906831	ENSG00000221401.1	+	miRNA	NOVEL	AC025594.1	1	1	0.854241
chr7	128912732	128914063	128913397	ENSG00000224163.4	-	unprocessed_pseudogene	KNOWN	RP11-309L24.6	1	3	0.676954
chr7	128937612	128950035	128943823	ENSG00000128604.18	+	protein_coding	KNOWN	IRF5	15	10	0.729320
chr7	128952527	128953316	128952921	ENSG00000275106.1	-	lincRNA	KNOWN	RP11-309L24.10	1	1	0.484693
chr7	128954180	129055173	129004676	ENSG00000064419.13	-	protein_coding	KNOWN	TNPO3	5	24	0.333841
chr7	128970734	128971029	128970881	ENSG00000242241.3	+	misc_RNA	KNOWN	RN7SL306P	1	1	0.307969
chr7	129028889	129030527	129029708	ENSG00000244556.1	+	processed_pseudogene	KNOWN	ODCP	1	1	0.183397
chr7	129055223	129057239	129056231	ENSG00000230359.5	+	transcribed_processed_pseudogene	KNOWN	TPI1P2	2	1	0.513818
chr7	129066021	129066462	129066241	ENSG00000242162.1	-	processed_pseudogene	KNOWN	RP11-128A6.3	1	1	0.513818
chr7	129095301	129095811	129095556	ENSG00000241102.1	-	processed_pseudogene	KNOWN	RP11-286H14.2	1	2	0.182190
chr7	129096027	129096735	129096381	ENSG00000241573.1	-	processed_pseudogene	KNOWN	RP11-286H14.1	1	2	0.182190
chr7	129117513	129117827	129117670	ENSG00000240416.1	-	processed_pseudogene	KNOWN	CYCSP20	1	1	0.349488
chr7	129126518	129130793	129128655	ENSG00000230626.3	+	transcribed_processed_pseudogene	KNOWN	RP11-286H14.4	2	2	0.326671
chr7	129144892	129169697	129157294	ENSG00000158457.5	+	protein_coding	KNOWN	TSPAN33	4	8	0.298041
chr7	129164849	129164961	129164905	ENSG00000200629.1	+	misc_RNA	KNOWN	RNY1P11	1	1	0.316552
chr7	129188872	129213545	129201208	ENSG00000128602.9	+	protein_coding	KNOWN	SMO	4	12	0.240603
chr7	129209775	129213545	129211660	ENSG00000243230.1	-	antisense	KNOWN	RP11-286H14.8	1	2	0.467969
chr7	129225023	129430211	129327617	ENSG00000158467.16	+	protein_coding	KNOWN	AHCYL2	12	17	0.145514
chr7	129410113	129410370	129410241	ENSG00000238072.1	-	processed_pseudogene	KNOWN	RP11-305M3.2	1	1	0.075872
chr7	129434433	129488399	129461416	ENSG00000128578.9	+	protein_coding	KNOWN	STRIP2	3	21	0.317395
chr7	129477875	129478101	129477988	ENSG00000239919.1	+	processed_pseudogene	KNOWN	SNRPGP3	1	1	0.290321
chr7	129484504	129484656	129484580	ENSG00000199846.1	+	snRNA	KNOWN	RNU1-72P	1	1	0.290321
chr7	129502479	129512932	129507705	ENSG00000240204.2	+	protein_coding	KNOWN	SMKR1	2	2	0.278586
chr7	129604548	129611630	129608089	ENSG00000273329.1	-	lincRNA	KNOWN	RP11-448A19.1	1	1	0.201595
chr7	129611714	129757082	129684398	ENSG00000106459.14	+	protein_coding	KNOWN	NRF1	7	12	0.091229
chr7	129756266	129756377	129756321	ENSG00000212238.1	+	rRNA	KNOWN	RNA5SP244	1	1	0.118586
chr7	129770379	129770490	129770434	ENSG00000207990.2	-	miRNA	KNOWN	MIR182	1	1	0.804552
chr7	129774692	129774769	129774730	ENSG00000199158.1	-	miRNA	KNOWN	MIR96	1	1	0.804552
chr7	129774905	129775014	129774959	ENSG00000207691.1	-	miRNA	KNOWN	MIR183	1	1	0.804552
chr7	129783370	129785185	129784277	ENSG00000242078.1	-	lincRNA	KNOWN	RP11-738B7.1	1	3	0.804552
chr7	129830732	129952949	129891840	ENSG00000186591.11	-	protein_coding	KNOWN	UBE2H	9	7	0.238073
chr7	129953234	130026989	129990111	ENSG00000244036.3	+	antisense	KNOWN	RP11-306G20.1	2	5	0.468055
chr7	129954693	129954794	129954743	ENSG00000199516.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.386826
chr7	130018286	130051451	130034868	ENSG00000091732.15	-	protein_coding	KNOWN	ZC3HC1	11	11	0.451219
chr7	130027277	130027397	130027337	ENSG00000201109.1	+	rRNA	KNOWN	RNA5SP245	1	1	0.590332
chr7	130070510	130135720	130103115	ENSG00000128607.13	+	protein_coding	KNOWN	KLHDC10	4	10	-0.050848
chr7	130141731	130142615	130142173	ENSG00000229196.3	+	antisense	KNOWN	RP11-775D22.2	2	2	0.138786
chr7	130164715	130207770	130186242	ENSG00000146842.16	-	protein_coding	KNOWN	TMEM209	7	15	0.003469
chr7	130173718	130205361	130189539	ENSG00000240571.1	+	antisense	KNOWN	RP11-775D22.3	1	5	-0.079543
chr7	130207860	130216843	130212351	ENSG00000165120.3	+	protein_coding	KNOWN	SSMEM1	1	3	0.293603
chr7	130255902	130262770	130259336	ENSG00000270992.1	+	processed_pseudogene	KNOWN	RP11-190G13.4	1	2	0.143831
chr7	130266827	130289798	130278312	ENSG00000158516.11	+	protein_coding	KNOWN	CPA2	4	11	0.031251
chr7	130293134	130324180	130308657	ENSG00000128510.10	+	protein_coding	KNOWN	CPA4	11	11	0.377735
chr7	130344816	130368730	130356773	ENSG00000158525.15	+	protein_coding	KNOWN	CPA5	11	13	0.504324
chr7	130380339	130388114	130384226	ENSG00000091704.9	+	protein_coding	KNOWN	CPA1	9	10	0.377394
chr7	130393771	130442433	130418102	ENSG00000106477.18	-	protein_coding	KNOWN	CEP41	19	11	0.294413
chr7	130481491	130484392	130482941	ENSG00000259920.1	-	lincRNA	KNOWN	RP11-2E11.5	1	1	-0.185303
chr7	130486042	130491033	130488537	ENSG00000272701.2	-	antisense	KNOWN	MESTIT1	1	2	-0.063829
chr7	130486171	130506296	130496233	ENSG00000106484.14	+	protein_coding	KNOWN	MEST	18	12	0.289510
chr7	130487483	130487622	130487552	ENSG00000277269.1	+	misc_RNA	NOVEL	MESTIT1_1	1	1	-0.185303
chr7	130488304	130488538	130488421	ENSG00000278055.1	+	misc_RNA	NOVEL	MESTIT1_2	1	1	-0.185303
chr7	130489868	130489966	130489917	ENSG00000274500.1	+	misc_RNA	NOVEL	MESTIT1_3	1	1	-0.185303
chr7	130495794	130498427	130497110	ENSG00000270823.1	-	antisense	KNOWN	RP11-2E11.6	1	1	0.401039
chr7	130496111	130496204	130496157	ENSG00000199043.1	+	miRNA	KNOWN	MIR335	1	1	0.401039
chr7	130506238	130668748	130587493	ENSG00000158623.14	-	protein_coding	KNOWN	COPG2	3	24	0.067930
chr7	130507660	130508282	130507971	ENSG00000270953.1	+	antisense	KNOWN	RP11-2E11.9	1	1	0.401039
chr7	130602795	130602913	130602854	ENSG00000239021.1	-	rRNA	KNOWN	RNA5SP246	1	1	-0.171043
chr7	130645225	130645594	130645409	ENSG00000226045.1	-	processed_pseudogene	KNOWN	AC009274.6	1	1	0.073376
chr7	130668648	130687432	130678040	ENSG00000213265.8	-	protein_coding	KNOWN	TSGA13	4	9	0.030069
chr7	130731235	130734061	130732648	ENSG00000266265.2	-	protein_coding	KNOWN	KLF14	1	1	-0.274791
chr7	130790208	130791724	130790966	ENSG00000271522.1	+	lincRNA	KNOWN	RP11-36B6.1	1	1	0.048138
chr7	130822868	130823219	130823043	ENSG00000229858.2	-	processed_pseudogene	KNOWN	AC016831.5	1	1	-0.177195
chr7	130823205	130823511	130823358	ENSG00000240680.1	-	processed_pseudogene	KNOWN	AC016831.3	1	1	-0.177195
chr7	130840204	130843725	130841964	ENSG00000232716.2	-	processed_pseudogene	KNOWN	AC016831.6	1	5	-0.488783
chr7	130853720	130928649	130891184	ENSG00000233559.1	+	lincRNA	KNOWN	AC016831.7	1	5	0.338110
chr7	130876735	130876821	130876778	ENSG00000277934.2	-	miRNA	KNOWN	MIR29A	1	1	0.322162
chr7	130876809	130913310	130895059	ENSG00000226380.7	-	lincRNA	KNOWN	AC058791.1	3	4	0.462683
chr7	130877459	130877539	130877499	ENSG00000274250.1	-	miRNA	KNOWN	MIR29B1	1	1	0.322162
chr7	130930209	130932206	130931207	ENSG00000271204.1	-	lincRNA	KNOWN	RP11-138A9.1	1	1	0.185605
chr7	130936464	130939661	130938062	ENSG00000273319.1	+	lincRNA	KNOWN	RP11-138A9.2	1	1	0.185605
chr7	130941760	131110176	131025968	ENSG00000231721.6	-	antisense	KNOWN	LINC-PINT	8	6	0.132755
chr7	131054886	131054992	131054939	ENSG00000199627.1	-	snRNA	KNOWN	RNU6-1010P	1	1	0.509310
chr7	131110096	131496636	131303366	ENSG00000128585.17	+	protein_coding	KNOWN	MKLN1	12	19	-0.045251
chr7	131242590	131242995	131242792	ENSG00000233287.1	+	processed_pseudogene	KNOWN	AC009362.2	1	1	0.233238
chr7	131309744	131328222	131318983	ENSG00000236753.5	-	processed_transcript	KNOWN	MKLN1-AS	6	6	0.188555
chr7	131493964	131497694	131495829	ENSG00000273489.1	-	antisense	KNOWN	RP11-180C16.1	1	1	-0.356993
chr7	131500262	131558217	131529239	ENSG00000128567.16	-	protein_coding	KNOWN	PODXL	8	9	0.252926
chr7	131520137	131520503	131520320	ENSG00000224545.1	+	processed_pseudogene	KNOWN	AC008264.4	1	1	0.371609
chr7	131661952	131662624	131662288	ENSG00000213261.3	-	processed_pseudogene	KNOWN	EEF1B2P6	1	1	0.449544
chr7	131665507	131665858	131665682	ENSG00000236238.2	+	processed_pseudogene	KNOWN	AC093106.4	1	1	0.449544
chr7	131702269	131702653	131702461	ENSG00000236395.1	-	processed_pseudogene	KNOWN	AC093106.6	1	1	0.030916
chr7	131753746	131754252	131753999	ENSG00000236281.1	-	processed_pseudogene	KNOWN	AC093106.5	1	1	-0.328117
chr7	131852680	131852774	131852727	ENSG00000252811.1	-	miRNA	NOVEL	AC008085.1	1	1	-0.013718
chr7	131892616	131893615	131893115	ENSG00000233263.1	-	processed_pseudogene	KNOWN	AC009518.2	1	2	0.137554
chr7	131893822	131894074	131893948	ENSG00000236386.1	+	processed_pseudogene	KNOWN	AC009518.3	1	1	0.137554
chr7	131897641	131948953	131923297	ENSG00000224865.7	+	lincRNA	KNOWN	AC009518.4	2	6	-0.179294
chr7	132086266	132087992	132087129	ENSG00000229532.1	+	processed_pseudogene	KNOWN	AC105443.2	1	3	0.192596
chr7	132123332	132648688	132386010	ENSG00000221866.9	-	protein_coding	KNOWN	PLXNA4	5	32	-0.023094
chr7	132264152	132271269	132267710	ENSG00000225144.2	+	antisense	KNOWN	AC018643.4	1	3	-0.026336
chr7	132352334	132367976	132360155	ENSG00000223436.1	+	antisense	KNOWN	AC011625.1	1	3	-0.192738
chr7	132648794	132728769	132688781	ENSG00000183470.9	+	lincRNA	KNOWN	FLJ40288	2	5	0.137444
chr7	132753023	132753126	132753074	ENSG00000201009.1	+	snoRNA	NOVEL	SNORD46	1	1	0.288849
chr7	132758970	132760632	132759801	ENSG00000225881.1	+	antisense	KNOWN	AC009365.4	1	2	0.288849
chr7	132784868	133082088	132933478	ENSG00000106554.11	-	protein_coding	KNOWN	CHCHD3	8	11	-0.167302
chr7	132830693	132849593	132840143	ENSG00000227197.1	+	antisense	KNOWN	AC009518.8	1	4	-0.149826
chr7	133034607	133035920	133035263	ENSG00000283041.1	-	processed_pseudogene	KNOWN	RP11-371A22.1	1	1	-0.290624
chr7	133082829	133082932	133082880	ENSG00000272393.1	+	snRNA	KNOWN	RNU6-92P	1	1	0.068013
chr7	133169416	133170514	133169965	ENSG00000237821.1	-	processed_pseudogene	KNOWN	AC083873.4	1	1	-0.044132
chr7	133253073	134066589	133659831	ENSG00000131558.14	+	protein_coding	KNOWN	EXOC4	24	18	-0.169172
chr7	133262640	133262730	133262685	ENSG00000238844.1	-	miRNA	NOVEL	AC083875.1	1	1	-0.249045
chr7	133290881	133290988	133290934	ENSG00000276137.1	+	miRNA	KNOWN	MIR6133	1	1	-0.562512
chr7	133315009	133315413	133315211	ENSG00000235429.1	-	processed_pseudogene	KNOWN	AC083875.2	1	1	-0.218937
chr7	133727368	133727734	133727551	ENSG00000235967.1	-	processed_pseudogene	KNOWN	COX5BP3	1	1	-0.054229
chr7	133732493	133733595	133733044	ENSG00000226205.1	-	processed_pseudogene	KNOWN	AC007790.4	1	2	0.024878
chr7	134127299	134264591	134195945	ENSG00000155530.2	+	protein_coding	KNOWN	LRGUK	2	20	-0.334280
chr7	134284500	134286055	134285277	ENSG00000231098.1	+	antisense	KNOWN	AC008154.4	1	2	-0.551864
chr7	134289332	134317051	134303191	ENSG00000205060.10	-	protein_coding	KNOWN	SLC35B4	4	10	-0.043992
chr7	134346071	134350791	134348431	ENSG00000229177.1	-	lincRNA	KNOWN	AC008154.5	1	2	-0.296383
chr7	134416290	134432453	134424371	ENSG00000273297.1	-	lincRNA	KNOWN	RP11-38M8.1	3	3	-0.205297
chr7	134442350	134459284	134450817	ENSG00000085662.13	-	protein_coding	KNOWN	AKR1B1	14	10	0.293340
chr7	134527592	134541408	134534500	ENSG00000198074.9	+	protein_coding	KNOWN	AKR1B10	4	10	0.192423
chr7	134549136	134579875	134564505	ENSG00000227471.8	+	protein_coding	KNOWN	AKR1B15	3	12	0.064682
chr7	134646808	134679813	134663310	ENSG00000172331.11	+	protein_coding	KNOWN	BPGM	4	4	-0.096467
chr7	134684144	134687990	134686067	ENSG00000224375.1	+	lincRNA	KNOWN	AC009276.4	1	3	0.002557
chr7	134734898	134735129	134735013	ENSG00000230101.5	-	processed_pseudogene	KNOWN	TUBB3P2	1	1	-0.025365
chr7	134744252	134970728	134857490	ENSG00000122786.19	+	protein_coding	KNOWN	CALD1	24	15	0.126711
chr7	134986508	135147963	135067235	ENSG00000146856.14	+	protein_coding	KNOWN	AGBL3	7	17	-0.359336
chr7	135092363	135170795	135131579	ENSG00000122783.16	-	protein_coding	KNOWN	C7orf49	14	4	-0.402005
chr7	135128444	135129685	135129064	ENSG00000223500.1	+	processed_pseudogene	KNOWN	AC083862.6	1	1	-0.221669
chr7	135148072	135166215	135157143	ENSG00000146859.6	+	protein_coding	KNOWN	TMEM140	2	2	-0.416443
chr7	135168403	135169547	135168975	ENSG00000272941.1	+	antisense	KNOWN	RP11-134L10.1	1	1	-0.409889
chr7	135183839	135211534	135197686	ENSG00000105875.13	-	protein_coding	KNOWN	WDR91	9	15	0.496293
chr7	135198401	135209837	135204119	ENSG00000231794.5	+	antisense	KNOWN	AC009542.2	4	4	0.545450
chr7	135206994	135207078	135207036	ENSG00000277138.1	-	miRNA	KNOWN	MIR6509	1	1	0.545450
chr7	135231979	135258492	135245235	ENSG00000146857.3	+	protein_coding	KNOWN	STRA8	1	9	-0.198764
chr7	135270017	135277409	135273713	ENSG00000276067.1	-	unprocessed_pseudogene	KNOWN	RP11-260N14.1	1	5	0.076644
chr7	135361795	135510127	135435961	ENSG00000080802.18	-	protein_coding	KNOWN	CNOT4	12	12	-0.177944
chr7	135444461	135444925	135444693	ENSG00000227073.1	+	processed_pseudogene	KNOWN	SDHDP2	1	1	0.044994
chr7	135557919	135648757	135603338	ENSG00000155561.14	+	protein_coding	KNOWN	NUP205	10	43	-0.027290
chr7	135650972	135651416	135651194	ENSG00000271414.1	+	processed_pseudogene	KNOWN	RP11-751K21.1	1	1	0.125350
chr7	135660039	135660647	135660343	ENSG00000223718.3	+	processed_pseudogene	KNOWN	AC093107.7	1	1	0.125350
chr7	135662496	135693418	135677957	ENSG00000243317.7	+	protein_coding	KNOWN	C7orf73	4	4	0.293992
chr7	135665599	135665702	135665650	ENSG00000212303.1	-	snRNA	KNOWN	RNU6-1154P	1	1	0.125350
chr7	135681237	135729258	135705247	ENSG00000164707.15	-	protein_coding	KNOWN	SLC13A4	7	16	0.378910
chr7	135704537	135704841	135704689	ENSG00000273219.1	+	antisense	KNOWN	RP11-644N4.1	1	1	0.348513
chr7	135728348	135748846	135738597	ENSG00000189320.8	-	protein_coding	KNOWN	FAM180A	4	4	0.199687
chr7	135798006	135798109	135798057	ENSG00000222219.1	-	miRNA	NOVEL	AC091736.1	1	1	-0.034226
chr7	135926455	135932881	135929668	ENSG00000224746.1	+	antisense	KNOWN	AC015987.1	1	2	0.065604
chr7	135926761	135977353	135952057	ENSG00000105887.10	-	protein_coding	KNOWN	MTPN	2	4	-0.086166
chr7	135927274	135927450	135927362	ENSG00000267697.1	-	protein_coding	KNOWN	LUZP6	1	1	0.265640
chr7	135960703	135960809	135960756	ENSG00000199700.1	+	snRNA	KNOWN	RNU6-223P	1	1	0.022570
chr7	136025761	136084668	136055214	ENSG00000230649.2	+	lincRNA	KNOWN	AC024084.1	1	4	-0.173335
chr7	136052813	136052917	136052865	ENSG00000274268.1	+	miRNA	NOVEL	AC024084.2	1	1	-0.179035
chr7	136092925	136437426	136265175	ENSG00000232053.6	+	lincRNA	KNOWN	AC009784.3	4	7	-0.505880
chr7	136129980	136130081	136130030	ENSG00000206705.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.477864
chr7	136244444	136244536	136244490	ENSG00000220982.3	+	miRNA	NOVEL	AC009784.1	1	1	-0.378755
chr7	136262558	136263017	136262787	ENSG00000236503.1	-	processed_pseudogene	KNOWN	AC009784.4	1	1	-0.709679
chr7	136485656	136488317	136486986	ENSG00000226066.1	+	processed_pseudogene	KNOWN	AC009541.1	1	1	-0.492971
chr7	136685559	137182107	136933833	ENSG00000234352.9	-	antisense	KNOWN	AC009264.1	9	5	-0.408754
chr7	136713871	136715188	136714529	ENSG00000231244.1	+	processed_pseudogene	KNOWN	PSMC1P3	1	1	-0.288432
chr7	136868669	137020255	136944462	ENSG00000181072.11	+	protein_coding	KNOWN	CHRM2	7	5	-0.314149
chr7	136903167	136903294	136903230	ENSG00000207597.1	+	miRNA	KNOWN	MIR490	1	1	-0.267904
chr7	136938280	136938553	136938416	ENSG00000223657.2	-	processed_pseudogene	KNOWN	KRT8P51	1	1	-0.320062
chr7	137164043	137164612	137164327	ENSG00000224469.1	+	processed_pseudogene	KNOWN	AC009517.2	1	1	-0.428840
chr7	137227341	137343865	137285603	ENSG00000105894.11	-	protein_coding	KNOWN	PTN	2	6	-0.273807
chr7	137287687	137287762	137287724	ENSG00000202023.1	+	snoRNA	NOVEL	SNORD81	1	1	-0.485984
chr7	137318592	137326953	137322772	ENSG00000231114.1	+	lincRNA	KNOWN	AC078842.4	2	2	-0.157036
chr7	137344930	137354483	137349706	ENSG00000228031.2	-	lincRNA	KNOWN	AC078842.3	1	4	-0.182743
chr7	137381037	137847092	137614064	ENSG00000157680.15	-	protein_coding	KNOWN	DGKI	13	34	-0.070107
chr7	137513832	137514238	137514035	ENSG00000279483.1	+	protein_coding	KNOWN	AC090498.1	1	1	0.074817
chr7	137721985	137722846	137722415	ENSG00000230383.1	+	processed_pseudogene	KNOWN	AC009245.3	1	1	-0.149766
chr7	137874979	138002067	137938523	ENSG00000182158.14	-	protein_coding	KNOWN	CREB3L2	8	13	0.295038
chr7	137953348	137957966	137955657	ENSG00000237243.1	+	antisense	KNOWN	AC022173.2	1	4	0.210433
chr7	138002324	138117986	138060155	ENSG00000122787.14	+	protein_coding	KNOWN	AKR1D1	6	10	-0.181572
chr7	138022458	138024339	138023398	ENSG00000234639.1	+	processed_pseudogene	KNOWN	AC009263.2	1	3	0.220316
chr7	138046654	138047897	138047275	ENSG00000231923.1	+	processed_pseudogene	KNOWN	AC024082.3	1	2	-0.124820
chr7	138060056	138060293	138060174	ENSG00000231931.1	+	processed_pseudogene	KNOWN	AC024082.4	1	1	-0.201508
chr7	138068542	138068629	138068585	ENSG00000221558.2	-	miRNA	NOVEL	AC024082.1	1	1	-0.201508
chr7	138091254	138091315	138091284	ENSG00000222514.1	+	misc_RNA	KNOWN	RN7SKP223	1	1	-0.540276
chr7	138122202	138124595	138123398	ENSG00000233951.3	+	processed_pseudogene	KNOWN	RCC2P3	1	3	-0.251310
chr7	138123758	138123821	138123789	ENSG00000266193.1	+	miRNA	KNOWN	MIR4468	1	1	-0.251310
chr7	138163440	138164637	138164038	ENSG00000225559.1	+	lincRNA	KNOWN	AC083867.4	1	2	-0.101888
chr7	138175045	138175136	138175090	ENSG00000252820.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.271756
chr7	138187998	138188129	138188063	ENSG00000201465.1	-	snoRNA	NOVEL	SNORA51	1	1	-0.271756
chr7	138298088	138298484	138298286	ENSG00000213238.6	-	processed_pseudogene	KNOWN	AC008155.2	1	1	-0.594193
chr7	138404195	138404523	138404359	ENSG00000213237.4	-	processed_pseudogene	KNOWN	AC008155.1	1	1	0.127181
chr7	138415480	138415574	138415527	ENSG00000281271.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.258915
chr7	138440690	138442238	138441464	ENSG00000214815.2	+	processed_pseudogene	KNOWN	AC008265.2	1	1	-0.184526
chr7	138460334	138589993	138525163	ENSG00000122779.16	+	protein_coding	KNOWN	TRIM24	7	26	-0.154489
chr7	138490581	138491361	138490971	ENSG00000234995.1	-	processed_pseudogene	KNOWN	AC013429.5	1	1	-0.229936
chr7	138594285	138701352	138647818	ENSG00000157703.15	-	protein_coding	KNOWN	SVOPL	7	15	-0.119785
chr7	138625060	138625179	138625119	ENSG00000252188.1	-	snoRNA	NOVEL	SNORA40	1	1	-0.026403
chr7	138645671	138646448	138646059	ENSG00000234658.1	-	processed_pseudogene	KNOWN	AC013429.4	1	2	-0.344107
chr7	138688980	138689522	138689251	ENSG00000243099.1	+	processed_pseudogene	KNOWN	AC020983.5	1	1	0.126757
chr7	138701607	138703062	138702334	ENSG00000223721.3	+	processed_pseudogene	KNOWN	UQCRFS1P2	1	2	-0.078994
chr7	138706295	138799560	138752927	ENSG00000105929.15	-	protein_coding	KNOWN	ATP6V0A4	7	22	0.195058
chr7	138797952	138838101	138818026	ENSG00000214128.10	+	protein_coding	KNOWN	TMEM213	5	3	0.084564
chr7	138831381	138981318	138906349	ENSG00000122778.9	-	protein_coding	KNOWN	KIAA1549	2	20	0.183007
chr7	138876359	138876465	138876412	ENSG00000199646.1	-	snRNA	KNOWN	RNU6-1272P	1	1	0.224299
chr7	139025706	139036029	139030867	ENSG00000146858.7	-	protein_coding	KNOWN	ZC3HAV1L	1	5	-0.043950
chr7	139043520	139109719	139076619	ENSG00000105939.12	-	protein_coding	KNOWN	ZC3HAV1	4	13	0.244908
chr7	139049456	139050006	139049731	ENSG00000229677.1	-	processed_pseudogene	KNOWN	RP11-383F6.1	1	1	0.134677
chr7	139133744	139191986	139162865	ENSG00000105948.13	+	protein_coding	KNOWN	TTC26	10	18	-0.271175
chr7	139172516	139174266	139173391	ENSG00000239254.1	-	processed_pseudogene	KNOWN	RP11-365F18.3	1	1	-0.359704
chr7	139198557	139199142	139198849	ENSG00000271537.1	-	processed_pseudogene	KNOWN	RP11-365F18.6	1	1	-0.289098
chr7	139227537	139227828	139227682	ENSG00000228360.1	-	processed_pseudogene	KNOWN	RP11-365F18.1	1	2	-0.100653
chr7	139228221	139228605	139228413	ENSG00000271404.1	+	processed_pseudogene	KNOWN	MZT1P2	1	2	-0.100653
chr7	139230356	139308236	139269296	ENSG00000157741.14	+	protein_coding	KNOWN	UBN2	4	18	-0.003386
chr7	139315291	139315394	139315342	ENSG00000206843.1	-	snRNA	KNOWN	RNU6-206P	1	1	0.073133
chr7	139339457	139346319	139342888	ENSG00000164898.12	+	protein_coding	KNOWN	C7orf55	5	3	0.384173
chr7	139340359	139423457	139381908	ENSG00000146963.17	+	protein_coding	KNOWN	LUC7L2	10	11	0.109492
chr7	139341360	139422599	139381979	ENSG00000269955.2	+	protein_coding	KNOWN	C7orf55-LUC7L2	1	11	0.107435
chr7	139359032	139359566	139359299	ENSG00000273391.1	-	antisense	KNOWN	RP11-634H22.1	1	1	0.422744
chr7	139448740	139448843	139448791	ENSG00000252332.1	+	snRNA	KNOWN	RNU6-911P	1	1	-0.107617
chr7	139452690	139483712	139468201	ENSG00000188883.4	-	protein_coding	KNOWN	KLRG2	2	5	0.071410
chr7	139502453	139503812	139503132	ENSG00000253183.1	+	processed_pseudogene	KNOWN	RP4-701O16.5	1	1	0.290119
chr7	139523856	139544984	139534420	ENSG00000236279.6	+	protein_coding	KNOWN	CLEC2L	3	5	0.106932
chr7	139534240	139534549	139534394	ENSG00000254270.1	+	processed_pseudogene	KNOWN	ERHP1	1	1	0.054517
chr7	139561570	139777778	139669674	ENSG00000064393.15	-	protein_coding	KNOWN	HIPK2	3	15	0.231909
chr7	139777051	140020325	139898688	ENSG00000059377.15	+	protein_coding	KNOWN	TBXAS1	22	18	0.042864
chr7	140023744	140063721	140043732	ENSG00000059378.12	-	protein_coding	KNOWN	PARP12	12	12	0.357044
chr7	140084746	140177035	140130890	ENSG00000006459.10	-	protein_coding	KNOWN	KDM7A	3	20	0.010286
chr7	140094697	140094792	140094744	ENSG00000251728.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.043986
chr7	140177261	140179640	140178450	ENSG00000260231.1	+	antisense	KNOWN	JHDM1D-AS1	1	1	0.126549
chr7	140209563	140209671	140209617	ENSG00000199971.1	-	snRNA	KNOWN	RNU6-797P	1	1	0.091992
chr7	140241870	140242032	140241951	ENSG00000199283.1	+	snRNA	KNOWN	RNU1-58P	1	1	0.263758
chr7	140282465	140282920	140282692	ENSG00000270512.1	+	processed_pseudogene	KNOWN	RP5-1136G2.1	1	1	0.247270
chr7	140292752	140293339	140293045	ENSG00000241661.1	+	processed_pseudogene	KNOWN	PPP1R2P6	1	1	0.116514
chr7	140293693	140404433	140349063	ENSG00000157800.17	-	protein_coding	KNOWN	SLC37A3	28	16	0.138173
chr7	140370441	140370545	140370493	ENSG00000223113.1	+	rRNA	KNOWN	RNA5SP247	1	1	-0.026190
chr7	140386781	140386907	140386844	ENSG00000202472.1	-	rRNA	KNOWN	RNA5SP248	1	1	-0.026190
chr7	140404043	140426250	140415146	ENSG00000146955.10	+	protein_coding	KNOWN	RAB19	3	4	0.572541
chr7	140435316	140435787	140435551	ENSG00000103200.6	-	processed_pseudogene	KNOWN	RP11-723C11.2	1	1	0.573525
chr7	140453040	140479569	140466304	ENSG00000133606.10	-	protein_coding	KNOWN	MKRN1	16	8	0.350893
chr7	140518420	140673993	140596206	ENSG00000146966.12	-	protein_coding	KNOWN	DENND2A	10	20	0.293342
chr7	140580287	140580349	140580318	ENSG00000221732.1	+	miRNA	NOVEL	AC006452.1	1	1	0.161254
chr7	140609847	140609955	140609901	ENSG00000201354.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.219999
chr7	140645829	140646126	140645977	ENSG00000240173.3	+	misc_RNA	KNOWN	RN7SL771P	1	1	0.323939
chr7	140645966	140646034	140646000	ENSG00000280499.1	+	miRNA	NOVEL	AC006452.2	1	1	0.323939
chr7	140673153	140696261	140684707	ENSG00000133597.9	+	protein_coding	KNOWN	ADCK2	6	8	0.366935
chr7	140690777	140722790	140706783	ENSG00000090266.12	+	protein_coding	KNOWN	NDUFB2	15	6	0.161933
chr7	140695336	140697077	140696206	ENSG00000240889.1	-	antisense	KNOWN	NDUFB2-AS1	1	2	0.391045
chr7	140719327	140924764	140822045	ENSG00000157764.12	-	protein_coding	KNOWN	BRAF	5	19	-0.120590
chr7	140884072	140884178	140884125	ENSG00000271932.1	+	snRNA	KNOWN	RNU6-85P	1	1	-0.091608
chr7	140934867	140935010	140934938	ENSG00000271611.1	+	processed_pseudogene	KNOWN	RP4-813F11.3	1	1	-0.107617
chr7	140997952	140999800	140998876	ENSG00000242703.1	-	processed_pseudogene	KNOWN	CCT4P1	1	2	-0.247983
chr7	141002610	141015228	141008919	ENSG00000090263.15	-	protein_coding	KNOWN	MRPS33	9	3	-0.238949
chr7	141052249	141052409	141052329	ENSG00000223212.1	+	snRNA	KNOWN	RNU4-74P	1	1	-0.367440
chr7	141074232	141480380	141277306	ENSG00000261115.5	+	protein_coding	KNOWN	TMEM178B	3	6	-0.049090
chr7	141173043	141173216	141173129	ENSG00000261778.1	-	processed_pseudogene	KNOWN	RP5-1173P7.1	1	1	-0.148367
chr7	141351977	141352768	141352372	ENSG00000261624.1	+	processed_pseudogene	KNOWN	RP5-914M6.1	1	2	-0.200035
chr7	141414383	141416390	141415386	ENSG00000204990.3	-	lincRNA	KNOWN	RP5-842K16.1	1	2	-0.037050
chr7	141429711	141431268	141430489	ENSG00000261629.1	-	antisense	KNOWN	RP5-842K16.2	1	2	0.062537
chr7	141512698	141513183	141512940	ENSG00000261797.1	-	lincRNA	KNOWN	RP11-744I24.3	1	2	0.054124
chr7	141529203	141551304	141540253	ENSG00000261570.1	-	antisense	KNOWN	RP11-744I24.2	2	4	0.069889
chr7	141551189	141655244	141603216	ENSG00000006530.15	+	protein_coding	KNOWN	AGK	11	17	-0.198911
chr7	141652381	141656810	141654595	ENSG00000244701.1	-	antisense	KNOWN	RP5-894A10.2	1	2	-0.107617
chr7	141656728	141702153	141679440	ENSG00000257093.6	-	protein_coding	KNOWN	KIAA1147	2	9	-0.052726
chr7	141662922	141663846	141663384	ENSG00000270157.1	-	sense_intronic	KNOWN	RP5-894A10.6	1	1	-0.107617
chr7	141704338	141738346	141721342	ENSG00000228775.7	-	antisense	KNOWN	WEE2-AS1	10	7	-0.208230
chr7	141708353	141731271	141719812	ENSG00000214102.7	+	protein_coding	KNOWN	WEE2	2	12	-0.232128
chr7	141727984	141728148	141728066	ENSG00000212153.1	+	snRNA	KNOWN	RNU1-82P	1	1	-0.251310
chr7	141738321	141787922	141763121	ENSG00000106028.10	+	protein_coding	KNOWN	SSBP1	15	8	-0.195256
chr7	141764097	141765197	141764647	ENSG00000127362.2	+	protein_coding	KNOWN	TAS2R3	1	1	-0.034920
chr7	141778442	141780819	141779630	ENSG00000127364.3	+	protein_coding	KNOWN	TAS2R4	1	1	-0.329965
chr7	141787815	141788640	141788227	ENSG00000270923.1	+	processed_pseudogene	KNOWN	TAS2R6P	1	1	-0.329965
chr7	141790217	141791367	141790792	ENSG00000127366.5	+	protein_coding	KNOWN	TAS2R5	1	1	0.117229
chr7	141801315	141802059	141801687	ENSG00000241926.1	-	processed_pseudogene	KNOWN	RP5-1154E9.7	1	1	0.117229
chr7	141802482	141803487	141802984	ENSG00000224354.2	-	processed_pseudogene	KNOWN	MTND2P5	1	1	0.117229
chr7	141803701	141804652	141804176	ENSG00000239648.1	-	processed_pseudogene	KNOWN	MTND1P3	1	1	0.117229
chr7	141811805	141812257	141812031	ENSG00000240677.1	+	processed_pseudogene	KNOWN	MYL6P4	1	1	-0.580204
chr7	141836286	141841487	141838886	ENSG00000165076.13	-	protein_coding	KNOWN	PRSS37	4	7	-0.391758
chr7	141862860	141863737	141863298	ENSG00000240031.1	+	transcribed_unprocessed_pseudogene	KNOWN	OR9A3P	2	1	-0.311364
chr7	141887148	141888092	141887620	ENSG00000237621.3	+	transcribed_unprocessed_pseudogene	KNOWN	OR9A1P	2	1	-0.284863
chr7	141907813	142106747	142007280	ENSG00000257335.8	+	protein_coding	KNOWN	MGAM	9	71	-0.359572
chr7	141911217	141911943	141911580	ENSG00000244292.1	+	transcribed_unprocessed_pseudogene	KNOWN	OR9N1P	2	1	-0.279977
chr7	141918817	141919909	141919363	ENSG00000258083.1	+	protein_coding	KNOWN	OR9A4	1	1	-0.279977
chr7	141927357	141947007	141937182	ENSG00000258227.6	-	protein_coding	KNOWN	CLEC5A	7	7	-0.055882
chr7	141972631	141973773	141973202	ENSG00000257138.1	-	protein_coding	KNOWN	TAS2R38	1	1	-0.444441
chr7	142111749	142222324	142167036	ENSG00000257743.8	+	protein_coding	KNOWN	MGAM2	3	48	-0.416784
chr7	142240740	142247067	142243903	ENSG00000240268.6	-	transcribed_unprocessed_pseudogene	KNOWN	MOXD2P	2	11	-0.441832
chr7	142252143	142258058	142255100	ENSG00000258223.6	-	protein_coding	KNOWN	PRSS58	2	6	-0.348581
chr7	142265833	142272235	142269034	ENSG00000186163.9	-	transcribed_unprocessed_pseudogene	KNOWN	TRY2P	2	4	-0.253241
chr7	142285750	142288869	142287309	ENSG00000241881.1	+	lincRNA	KNOWN	U66059.58	1	2	-0.075608
chr7	142287251	142291597	142289424	ENSG00000277083.1	-	transcribed_unprocessed_pseudogene	KNOWN	PRSS3P3	2	4	-0.103374
chr7	142299177	142299460	142299318	ENSG00000242736.1	+	TR_V_pseudogene	KNOWN	TRBV1	1	1	-0.151122
chr7	142300924	142301432	142301178	ENSG00000226660.2	+	TR_V_gene	KNOWN	TRBV2	1	2	-0.151122
chr7	142308542	142309048	142308795	ENSG00000237702.2	+	TR_V_gene	KNOWN	TRBV3-1	1	2	-0.151122
chr7	142313184	142313666	142313425	ENSG00000211710.3	+	TR_V_gene	KNOWN	TRBV4-1	1	2	-0.008120
chr7	142320677	142321544	142321110	ENSG00000211734.3	+	TR_V_gene	KNOWN	TRBV5-1	1	3	-0.008120
chr7	142328297	142328786	142328541	ENSG00000211706.2	+	TR_V_gene	KNOWN	TRBV6-1	1	2	-0.008120
chr7	142332182	142332701	142332441	ENSG00000211707.3	+	TR_V_gene	KNOWN	TRBV7-1	1	2	-0.183643
chr7	142345421	142345985	142345703	ENSG00000211745.3	+	TR_V_gene	KNOWN	TRBV4-2	1	2	-0.183643
chr7	142349152	142349664	142349408	ENSG00000283063.1	+	TR_V_gene	KNOWN	TRBV6-2	1	2	-0.183643
chr7	142352819	142353358	142353088	ENSG00000282939.1	+	TR_V_gene	KNOWN	TRBV7-2	1	2	0.250421
chr7	142358639	142358917	142358778	ENSG00000243889.1	+	TR_V_pseudogene	KNOWN	TRBV8-1	1	1	0.250421
chr7	142372640	142372912	142372776	ENSG00000242771.1	+	TR_V_pseudogene	KNOWN	TRBV5-2	1	1	0.031238
chr7	142380806	142381261	142381033	ENSG00000211713.3	+	TR_V_gene	KNOWN	TRBV6-4	1	2	0.031238
chr7	142384329	142384841	142384585	ENSG00000211714.3	+	TR_V_gene	KNOWN	TRBV7-3	1	2	0.031238
chr7	142386378	142386647	142386512	ENSG00000239944.1	+	TR_V_pseudogene	KNOWN	TRBV8-2	1	1	0.031238
chr7	142389202	142389668	142389435	ENSG00000211715.1	+	TR_V_gene	KNOWN	TRBV5-3	1	2	0.031238
chr7	142391891	142392412	142392151	ENSG00000211716.2	+	TR_V_gene	KNOWN	TRBV9	1	2	0.230189
chr7	142399860	142400377	142400118	ENSG00000211717.3	+	TR_V_gene	KNOWN	TRBV10-1	1	2	0.230189
chr7	142407672	142408136	142407904	ENSG00000211720.3	+	TR_V_gene	KNOWN	TRBV11-1	1	2	0.230189
chr7	142415224	142415666	142415445	ENSG00000244661.1	+	TR_V_pseudogene	KNOWN	TRBV12-1	1	2	-0.178778
chr7	142424965	142425465	142425215	ENSG00000229769.2	+	TR_V_gene	KNOWN	TRBV10-2	1	2	-0.178778
chr7	142433895	142434394	142434144	ENSG00000241657.1	+	lincRNA	KNOWN	TRBV11-2	1	2	0.196834
chr7	142440883	142441325	142441104	ENSG00000211739.4	+	TR_V_pseudogene	KNOWN	TRBV12-2	1	2	0.196834
chr7	142450947	142451448	142451197	ENSG00000211721.2	+	TR_V_gene	KNOWN	TRBV6-5	1	2	-0.059318
chr7	142455174	142455635	142455404	ENSG00000253409.1	+	TR_V_gene	KNOWN	TRBV7-4	1	2	-0.059318
chr7	142462916	142463581	142463248	ENSG00000230099.2	+	TR_V_gene	KNOWN	TRBV5-4	1	2	-0.059318
chr7	142469537	142470013	142469775	ENSG00000211724.3	+	TR_V_gene	KNOWN	TRBV6-6	1	2	-0.046507
chr7	142474096	142474567	142474331	ENSG00000227550.2	+	TR_V_pseudogene	KNOWN	TRBV7-5	1	2	0.376243
chr7	142482548	142483019	142482783	ENSG00000211725.3	+	TR_V_gene	KNOWN	TRBV5-5	1	2	0.376243
chr7	142487863	142488295	142488079	ENSG00000253188.1	+	TR_V_gene	KNOWN	TRBV6-7	1	2	0.376243
chr7	142492132	142492673	142492402	ENSG00000211727.3	+	TR_V_gene	KNOWN	TRBV7-6	1	2	0.206027
chr7	142500028	142500534	142500281	ENSG00000211728.2	+	TR_V_gene	KNOWN	TRBV5-6	1	2	0.206027
chr7	142507382	142507810	142507596	ENSG00000253534.1	+	TR_V_gene	KNOWN	TRBV6-8	1	2	0.206027
chr7	142511626	142512127	142511876	ENSG00000253291.1	+	TR_V_gene	KNOWN	TRBV7-7	1	2	0.246604
chr7	142520090	142520556	142520323	ENSG00000211731.1	+	TR_V_gene	KNOWN	TRBV5-7	1	2	0.246604
chr7	142529290	142529762	142529526	ENSG00000278030.1	+	TR_V_gene	KNOWN	TRBV7-9	1	2	0.246604
chr7	142535809	142536292	142536050	ENSG00000276405.1	+	TR_V_gene	KNOWN	TRBV13	1	2	0.091992
chr7	142544212	142544685	142544448	ENSG00000275791.1	+	TR_V_gene	KNOWN	TRBV10-3	1	2	0.091992
chr7	142554836	142555318	142555077	ENSG00000276597.1	+	TR_V_gene	KNOWN	TRBV11-3	1	2	0.266866
chr7	142560423	142560931	142560677	ENSG00000274752.1	+	TR_V_gene	KNOWN	TRBV12-3	1	2	0.266866
chr7	142563740	142564245	142563992	ENSG00000276953.1	+	TR_V_gene	KNOWN	TRBV12-4	1	2	0.266866
chr7	142580917	142581427	142581172	ENSG00000275158.1	+	TR_V_gene	KNOWN	TRBV12-5	1	2	0.216883
chr7	142587868	142588359	142588113	ENSG00000275743.1	+	TR_V_gene	KNOWN	TRBV14	1	2	0.216883
chr7	142592928	142593473	142593200	ENSG00000276819.1	+	TR_V_gene	KNOWN	TRBV15	1	2	-0.164981
chr7	142598016	142598469	142598242	ENSG00000275243.1	+	TR_V_gene	KNOWN	TRBV16	1	2	-0.164981
chr7	142601628	142602360	142601994	ENSG00000277880.1	+	TR_V_gene	KNOWN	TRBV17	1	2	-0.164981
chr7	142615716	142616415	142616065	ENSG00000276557.1	+	TR_V_gene	KNOWN	TRBV18	1	2	-0.179554
chr7	142618849	142619532	142619190	ENSG00000211746.3	+	TR_V_gene	KNOWN	TRBV19	1	2	-0.179554
chr7	142626649	142627399	142627024	ENSG00000211747.3	+	TR_V_gene	KNOWN	TRBV20-1	1	2	-0.179554
chr7	142636924	142637384	142637154	ENSG00000251578.1	+	TR_V_pseudogene	KNOWN	TRBV21-1	1	2	-0.276396
chr7	142641746	142642196	142641971	ENSG00000240578.1	+	TR_V_pseudogene	KNOWN	TRBV22-1	1	2	-0.276396
chr7	142645961	142646467	142646214	ENSG00000211749.1	+	TR_V_gene	KNOWN	TRBV23-1	1	2	-0.276396
chr7	142656701	142657213	142656957	ENSG00000211750.2	+	TR_V_gene	KNOWN	TRBV24-1	1	2	-0.584469
chr7	142666272	142667718	142666995	ENSG00000270672.1	+	protein_coding	KNOWN	MTRNR2L6	1	1	-0.584469
chr7	142670740	142671244	142670992	ENSG00000282499.1	+	TR_V_gene	KNOWN	TRBV25-1	1	2	-0.015421
chr7	142681415	142681869	142681642	ENSG00000239992.1	+	TR_V_pseudogene	KNOWN	TRBVA	1	2	-0.015421
chr7	142695699	142696183	142695941	ENSG00000249912.1	+	TR_V_pseudogene	KNOWN	TRBV26	1	2	-0.262117
chr7	142711384	142711924	142711654	ENSG00000241911.1	+	TR_V_pseudogene	KNOWN	TRBVB	1	2	-0.137743
chr7	142715346	142715861	142715603	ENSG00000211752.3	+	TR_V_gene	KNOWN	TRBV27	1	2	-0.137743
chr7	142720660	142721160	142720910	ENSG00000211753.4	+	TR_V_gene	KNOWN	TRBV28	1	2	-0.137743
chr7	142720670	142793368	142757019	ENSG00000211751.8	+	TR_C_gene	KNOWN	TRBC1	2	7	-0.060238
chr7	142722358	142722764	142722561	ENSG00000244273.1	+	processed_pseudogene	KNOWN	PGBD4P1	1	1	-0.137743
chr7	142740206	142740894	142740550	ENSG00000232869.2	+	TR_V_gene	KNOWN	TRBV29-1	1	2	-0.303937
chr7	142748662	142774564	142761613	ENSG00000275896.4	+	protein_coding	KNOWN	PRSS2	8	7	0.001404
chr7	142749468	142763997	142756732	ENSG00000204983.12	+	protein_coding	KNOWN	PRSS1	8	6	-0.004749
chr7	142760415	142763943	142762179	ENSG00000250591.3	+	unprocessed_pseudogene	KNOWN	PRSS3P1	1	5	0.006600
chr7	142778642	142779537	142779089	ENSG00000243661.1	-	processed_pseudogene	KNOWN	WBP1LP1	1	1	0.068066
chr7	142786213	142786224	142786218	ENSG00000282431.1	+	TR_D_gene	KNOWN	TRBD1	1	1	0.068066
chr7	142786880	142786927	142786903	ENSG00000282320.1	+	TR_J_gene	KNOWN	TRBJ1-1	1	1	0.068066
chr7	142787017	142787064	142787040	ENSG00000282420.1	+	TR_J_gene	KNOWN	TRBJ1-2	1	1	0.068066
chr7	142787630	142787679	142787654	ENSG00000282133.1	+	TR_J_gene	KNOWN	TRBJ1-3	1	1	0.068066
chr7	142788225	142788275	142788250	ENSG00000281958.1	+	TR_J_gene	KNOWN	TRBJ1-4	1	1	0.068066
chr7	142788498	142788547	142788522	ENSG00000282173.1	+	TR_J_gene	KNOWN	TRBJ1-5	1	1	0.068066
chr7	142788988	142789040	142789014	ENSG00000282780.1	+	TR_J_gene	KNOWN	TRBJ1-6	1	1	0.068066
chr7	142796365	142796414	142796389	ENSG00000211764.1	+	TR_J_gene	KNOWN	TRBJ2-1	1	1	0.442639
chr7	142796560	142796610	142796585	ENSG00000211765.1	+	TR_J_gene	KNOWN	TRBJ2-2	1	1	0.442639
chr7	142796697	142796742	142796719	ENSG00000211766.1	+	TR_J_gene	KNOWN	TRBJ2-2P	1	1	0.442639
chr7	142796847	142796895	142796871	ENSG00000211767.1	+	TR_J_gene	KNOWN	TRBJ2-3	1	1	0.442639
chr7	142796998	142797047	142797022	ENSG00000211768.1	+	TR_J_gene	KNOWN	TRBJ2-4	1	1	0.442639
chr7	142797119	142797166	142797142	ENSG00000211769.1	+	TR_J_gene	KNOWN	TRBJ2-5	1	1	0.442639
chr7	142797239	142797291	142797265	ENSG00000211770.1	+	TR_J_gene	KNOWN	TRBJ2-6	1	1	0.442639
chr7	142797456	142797502	142797479	ENSG00000211771.1	+	TR_J_gene	KNOWN	TRBJ2-7	1	1	0.442639
chr7	142801041	142802748	142801894	ENSG00000211772.9	+	TR_C_gene	KNOWN	TRBC2	1	4	0.442639
chr7	142812586	142813399	142812992	ENSG00000237254.2	-	TR_V_gene	KNOWN	TRBV30	1	2	0.038411
chr7	142855061	142871094	142863077	ENSG00000106123.11	+	protein_coding	KNOWN	EPHB6	11	20	-0.277226
chr7	142871203	142885762	142878482	ENSG00000165125.17	-	protein_coding	KNOWN	TRPV6	9	15	0.641599
chr7	142875836	142892743	142884289	ENSG00000224970.2	+	antisense	KNOWN	RP11-114L10.2	1	2	0.535406
chr7	142908101	142933808	142920954	ENSG00000127412.6	-	protein_coding	KNOWN	TRPV5	3	15	-0.156077
chr7	142939343	142940868	142940105	ENSG00000165131.6	+	protein_coding	KNOWN	C7orf34	2	3	-0.022944
chr7	142941114	142962681	142951897	ENSG00000197993.7	-	protein_coding	KNOWN	KEL	9	19	-0.045214
chr7	143026158	143027195	143026676	ENSG00000179468.5	-	protein_coding	KNOWN	OR9A2	1	1	0.160705
chr7	143047213	143047580	143047396	ENSG00000239293.1	-	unprocessed_pseudogene	KNOWN	OR9P1P	1	2	-0.272772
chr7	143052320	143053347	143052833	ENSG00000225781.1	+	protein_coding	KNOWN	OR6V1	1	1	0.144733
chr7	143062330	143063585	143062957	ENSG00000179420.11	-	transcribed_unprocessed_pseudogene	KNOWN	OR6W1P	2	2	0.144733
chr7	143132077	143139746	143135911	ENSG00000159763.3	+	protein_coding	KNOWN	PIP	1	4	0.166846
chr7	143183419	143184435	143183927	ENSG00000236398.2	+	protein_coding	KNOWN	TAS2R39	1	1	-0.402117
chr7	143220468	143222267	143221367	ENSG00000268170.2	-	antisense	KNOWN	RP11-556I13.2	1	1	0.159455
chr7	143222037	143223079	143222558	ENSG00000221937.4	+	protein_coding	KNOWN	TAS2R40	1	1	0.159455
chr7	143224042	143224234	143224138	ENSG00000279223.1	-	TEC	KNOWN	RP11-556I13.1	1	1	0.159455
chr7	143244093	143270854	143257473	ENSG00000197448.13	+	protein_coding	KNOWN	GSTK1	9	8	-0.042229
chr7	143255264	143287380	143271322	ENSG00000231840.1	-	antisense	KNOWN	AC073342.12	2	4	0.218668
chr7	143279957	143288048	143284002	ENSG00000178826.10	+	protein_coding	KNOWN	TMEM139	9	5	0.439915
chr7	143288215	143307696	143297955	ENSG00000106144.19	+	protein_coding	KNOWN	CASP2	7	12	0.361522
chr7	143290615	143290910	143290762	ENSG00000239419.3	+	misc_RNA	KNOWN	RN7SL535P	1	1	0.353619
chr7	143298516	143298814	143298665	ENSG00000240322.3	+	misc_RNA	KNOWN	RN7SL481P	1	1	0.353619
chr7	143312684	143313061	143312872	ENSG00000231531.5	-	processed_pseudogene	KNOWN	HINT1P1	1	1	0.403700
chr7	143316126	143352083	143334104	ENSG00000188037.10	+	protein_coding	KNOWN	CLCN1	4	23	0.272023
chr7	143353400	143362770	143358085	ENSG00000159784.17	-	protein_coding	KNOWN	FAM131B	9	7	0.537068
chr7	143363899	143364229	143364064	ENSG00000272619.1	+	lincRNA	KNOWN	RP11-563K23.1	1	1	0.537068
chr7	143379692	143380495	143380093	ENSG00000232533.1	-	antisense	KNOWN	AC093673.5	1	2	0.415496
chr7	143381080	143391111	143386095	ENSG00000159840.15	+	protein_coding	KNOWN	ZYX	10	10	0.498922
chr7	143382686	143382800	143382743	ENSG00000278449.1	+	miRNA	KNOWN	MIR6892	1	1	0.415496
chr7	143390289	143408892	143399590	ENSG00000146904.8	-	protein_coding	KNOWN	EPHA1	7	18	1.168058
chr7	143407813	143523449	143465631	ENSG00000229153.5	+	antisense	KNOWN	EPHA1-AS1	2	5	0.298396
chr7	143437034	143437973	143437503	ENSG00000234066.1	+	unitary_pseudogene	KNOWN	TAS2R62P	1	1	0.535122
chr7	143443453	143444409	143443931	ENSG00000185899.1	+	protein_coding	KNOWN	TAS2R60	1	1	0.535122
chr7	143477873	143478796	143478334	ENSG00000221855.1	+	protein_coding	KNOWN	TAS2R41	1	1	0.124782
chr7	143488489	143489402	143488945	ENSG00000236853.1	-	unitary_pseudogene	KNOWN	OR2R1P	1	1	0.124782
chr7	143510933	143511911	143511422	ENSG00000176510.4	-	polymorphic_pseudogene	KNOWN	OR10AC1	1	1	0.256623
chr7	143532749	143533164	143532956	ENSG00000229977.2	-	processed_pseudogene	KNOWN	AC073264.10	1	1	-0.000690
chr7	143545186	143546735	143545960	ENSG00000229877.1	-	processed_pseudogene	KNOWN	PAICSP5	1	2	-0.000690
chr7	143571801	143574387	143573094	ENSG00000271079.1	+	protein_coding	KNOWN	CTAGE15	1	1	-0.265737
chr7	143574746	143574848	143574797	ENSG00000252037.1	+	snRNA	KNOWN	RNU6-162P	1	1	-0.265737
chr7	143578907	143579072	143578989	ENSG00000230556.1	+	processed_pseudogene	KNOWN	AC073264.6	1	1	-0.265737
chr7	143598040	143604839	143601439	ENSG00000223459.5	+	unprocessed_pseudogene	KNOWN	TCAF1P1	1	7	0.019479
chr7	143620950	143730409	143675679	ENSG00000170379.19	+	protein_coding	KNOWN	TCAF2	6	9	-0.031404
chr7	143754628	143754730	143754679	ENSG00000252523.1	-	snRNA	KNOWN	RNU6-267P	1	1	-0.336466
chr7	143755089	143757696	143756392	ENSG00000271321.1	-	protein_coding	KNOWN	CTAGE6	1	1	-0.336466
chr7	143761790	143836933	143799361	ENSG00000253882.6	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-61L23.2	9	5	-0.092897
chr7	143782667	143784284	143783475	ENSG00000241136.1	+	processed_pseudogene	KNOWN	PAICSP6	1	2	-0.090212
chr7	143796295	143796720	143796507	ENSG00000232145.1	+	processed_pseudogene	KNOWN	RP11-307I2.1	1	1	-0.025972
chr7	143800732	143817973	143809352	ENSG00000159860.6	+	unprocessed_pseudogene	KNOWN	TCAF2P1	1	8	-0.090055
chr7	143851375	143902198	143876786	ENSG00000198420.9	-	protein_coding	KNOWN	TCAF1	7	9	-0.020996
chr7	143935166	143936279	143935722	ENSG00000221910.2	+	protein_coding	KNOWN	OR2F2	1	1	-0.096865
chr7	143954844	143997312	143976078	ENSG00000243583.1	+	lincRNA	KNOWN	RP4-669B10.3	2	3	-0.148981
chr7	143959927	143961015	143960471	ENSG00000213215.3	+	polymorphic_pseudogene	KNOWN	OR2F1	2	1	-0.037291
chr7	143959971	143960924	143960447	ENSG00000279723.1	+	protein_coding	KNOWN	AC004853.1	1	1	-0.037291
chr7	143979121	143980225	143979673	ENSG00000270729.1	-	processed_pseudogene	KNOWN	RP4-669B10.6	1	2	-0.223870
chr7	143980905	143981820	143981362	ENSG00000273377.1	+	unprocessed_pseudogene	KNOWN	OR2Q1P	1	1	-0.223870
chr7	143985142	143986651	143985896	ENSG00000242280.1	+	processed_pseudogene	KNOWN	SLC16A1P1	1	1	-0.223870
chr7	144003929	144004983	144004456	ENSG00000221813.3	+	protein_coding	KNOWN	OR6B1	1	1	-0.175630
chr7	144050368	144051380	144050874	ENSG00000221836.2	+	protein_coding	KNOWN	OR2A5	1	1	-0.298798
chr7	144074182	144075195	144074688	ENSG00000221933.2	+	protein_coding	KNOWN	OR2A25	1	1	-0.128777
chr7	144077721	144077825	144077773	ENSG00000239967.1	+	unprocessed_pseudogene	KNOWN	OR2A41P	1	1	-0.128777
chr7	144095048	144096093	144095570	ENSG00000221858.2	+	protein_coding	KNOWN	OR2A12	1	1	-0.396627
chr7	144109514	144110564	144110039	ENSG00000221989.2	+	protein_coding	KNOWN	OR2A2	1	1	-0.533330
chr7	144109583	144130069	144119826	ENSG00000221938.3	+	protein_coding	KNOWN	OR2A14	2	2	-0.644817
chr7	144118461	144119360	144118910	ENSG00000239981.1	-	unprocessed_pseudogene	KNOWN	OR2A15P	1	1	-0.650676
chr7	144142009	144142938	144142473	ENSG00000273234.1	+	unprocessed_pseudogene	KNOWN	OR2A13P	1	1	-0.445902
chr7	144157226	144158178	144157702	ENSG00000183122.4	+	unprocessed_pseudogene	KNOWN	OR2A3P	1	1	-0.175489
chr7	144176740	144177142	144176941	ENSG00000240621.1	+	unprocessed_pseudogene	KNOWN	OR2AO1P	1	1	-0.268184
chr7	144183466	144186053	144184759	ENSG00000225932.3	+	protein_coding	KNOWN	CTAGE4	1	1	-0.268184
chr7	144186083	144195655	144190869	ENSG00000213214.4	-	protein_coding	KNOWN	ARHGEF35	1	2	-0.063927
chr7	144194858	144280547	144237702	ENSG00000244198.5	+	antisense	KNOWN	RP4-545C24.1	8	6	-0.236023
chr7	144231911	144232843	144232377	ENSG00000212807.1	-	protein_coding	KNOWN	OR2A42	1	1	-0.394508
chr7	144250045	144252957	144251501	ENSG00000170356.8	-	transcribed_unprocessed_pseudogene	KNOWN	OR2A20P	2	1	-0.274250
chr7	144251264	144356181	144303722	ENSG00000244479.6	-	antisense	KNOWN	OR2A1-AS1	17	6	-0.189791
chr7	144258607	144259722	144259164	ENSG00000243896.3	-	protein_coding	KNOWN	OR2A7	1	1	-0.274250
chr7	144266701	144269288	144267994	ENSG00000244693.1	-	protein_coding	KNOWN	CTAGE8	1	1	-0.274250
chr7	144272445	144286966	144279705	ENSG00000204959.4	-	unprocessed_pseudogene	KNOWN	ARHGEF34P	1	12	-0.433867
chr7	144294480	144300934	144297707	ENSG00000228960.5	+	transcribed_unprocessed_pseudogene	KNOWN	OR2A9P	3	3	0.056514
chr7	144318125	144319057	144318591	ENSG00000221970.1	+	protein_coding	KNOWN	OR2A1	1	1	-0.004870
chr7	144355288	144380632	144367960	ENSG00000050327.14	+	protein_coding	KNOWN	ARHGEF5	4	15	0.094921
chr7	144397240	144410227	144403733	ENSG00000106410.14	-	protein_coding	KNOWN	NOBOX	2	10	0.047689
chr7	144434826	144435314	144435070	ENSG00000242978.1	-	processed_pseudogene	KNOWN	RP4-545C24.5	1	1	-0.114459
chr7	144451681	144451817	144451749	ENSG00000221507.1	+	snRNA	KNOWN	RNU6ATAC40P	1	1	-0.172905
chr7	144451941	144836395	144644168	ENSG00000196511.13	-	protein_coding	KNOWN	TPK1	13	12	-0.437757
chr7	144647186	144648575	144647880	ENSG00000243746.1	-	processed_pseudogene	KNOWN	EEF1A1P10	1	1	-0.518966
chr7	144849755	144850084	144849919	ENSG00000200673.1	-	misc_RNA	KNOWN	RN7SKP174	1	1	-0.279788
chr7	145005058	145006135	145005596	ENSG00000236343.1	+	processed_pseudogene	KNOWN	EI24P4	1	1	-0.552913
chr7	145009961	145010993	145010477	ENSG00000214035.3	+	processed_pseudogene	KNOWN	AC073310.4	1	1	-0.461959
chr7	145039999	145040941	145040470	ENSG00000225918.1	-	processed_pseudogene	KNOWN	RPL7P59	1	1	-0.426737
chr7	145269514	145270384	145269949	ENSG00000226592.1	+	processed_pseudogene	KNOWN	AC004911.2	1	1	-0.518080
chr7	145583197	145584817	145584007	ENSG00000231839.1	+	processed_pseudogene	KNOWN	AC073055.2	1	1	-0.516430
chr7	145675882	145681369	145678625	ENSG00000230746.1	-	lincRNA	KNOWN	AC006007.1	1	2	-0.374576
chr7	146050062	146050366	146050214	ENSG00000280144.1	+	TEC	KNOWN	RP11-13M3.1	1	1	-0.346129
chr7	146116002	148420998	147268500	ENSG00000174469.17	+	protein_coding	KNOWN	CNTNAP2	8	24	-0.407674
chr7	146208665	146208819	146208742	ENSG00000274127.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.478896
chr7	146311720	146311822	146311771	ENSG00000274118.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.551864
chr7	146896597	146896693	146896645	ENSG00000221766.1	-	miRNA	NOVEL	AC084872.1	1	1	-0.595540
chr7	147080934	147097609	147089271	ENSG00000236795.1	-	antisense	KNOWN	AC006004.1	1	4	-0.407538
chr7	147146342	147146756	147146549	ENSG00000226857.1	+	processed_pseudogene	KNOWN	DUTP3	1	1	-0.545438
chr7	147167344	147167572	147167458	ENSG00000232391.1	+	processed_pseudogene	KNOWN	RANP2	1	1	-0.636706
chr7	147378017	147378121	147378069	ENSG00000221442.1	-	miRNA	KNOWN	MIR548F4	1	1	-0.619287
chr7	147671711	147673143	147672427	ENSG00000230190.1	+	sense_intronic	KNOWN	AC005518.2	1	2	-0.604002
chr7	147704294	147704575	147704434	ENSG00000270634.1	-	processed_pseudogene	KNOWN	RP4-777G9.1	1	1	-0.547606
chr7	147831770	147831877	147831823	ENSG00000207318.1	+	snRNA	KNOWN	RNU6-1184P	1	1	-0.869534
chr7	147849884	147849982	147849933	ENSG00000251936.1	+	rRNA	KNOWN	RNA5SP249	1	1	-0.869534
chr7	147940007	147940301	147940154	ENSG00000242266.3	+	misc_RNA	KNOWN	RN7SL456P	1	1	-0.592232
chr7	148389645	148389859	148389752	ENSG00000199370.2	+	snoRNA	NOVEL	U3	1	1	0.074504
chr7	148438309	148438577	148438443	ENSG00000243374.3	+	misc_RNA	KNOWN	RN7SL72P	1	1	0.051120
chr7	148445786	148446299	148446042	ENSG00000274133.1	+	processed_pseudogene	KNOWN	RP11-163I18.2	1	1	0.051120
chr7	148580401	148580799	148580600	ENSG00000213210.4	+	processed_pseudogene	KNOWN	AC005229.5	1	1	0.300234
chr7	148590565	148615860	148603212	ENSG00000170279.2	+	protein_coding	KNOWN	C7orf33	1	3	-0.053270
chr7	148637179	148637587	148637383	ENSG00000213209.2	+	processed_pseudogene	KNOWN	AC005229.7	1	1	-0.303550
chr7	148649547	148650240	148649893	ENSG00000270200.1	+	processed_pseudogene	KNOWN	RP5-1136G13.1	1	2	-0.072818
chr7	148696467	148698664	148697565	ENSG00000273314.1	-	antisense	KNOWN	RP5-1136G13.2	1	1	-0.017419
chr7	148697914	148801036	148749475	ENSG00000055130.15	+	protein_coding	KNOWN	CUL1	4	22	0.061021
chr7	148730829	148730928	148730878	ENSG00000264918.1	-	miRNA	NOVEL	AC005229.1	1	1	0.091992
chr7	148807383	148884321	148845852	ENSG00000106462.10	-	protein_coding	KNOWN	EZH2	10	20	0.135254
chr7	148876018	148876286	148876152	ENSG00000275586.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.258642
chr7	148890226	148890513	148890369	ENSG00000239468.3	+	misc_RNA	KNOWN	RN7SL569P	1	1	-0.194126
chr7	148963315	148963410	148963362	ENSG00000252316.1	+	misc_RNA	KNOWN	RNY4	1	1	0.172365
chr7	148983755	148983856	148983805	ENSG00000202354.1	+	misc_RNA	KNOWN	RNY3	1	1	0.519853
chr7	148987136	148987248	148987192	ENSG00000201098.1	-	misc_RNA	KNOWN	RNY1	1	1	0.519853
chr7	148987527	148989432	148988479	ENSG00000281189.1	+	lincRNA	KNOWN	GHET1	1	1	0.519853
chr7	149003062	149028641	149015851	ENSG00000155660.10	-	protein_coding	KNOWN	PDIA4	3	10	0.667222
chr7	149033057	149033167	149033112	ENSG00000202528.1	+	snRNA	KNOWN	RNU6-650P	1	1	0.420774
chr7	149053961	149054173	149054067	ENSG00000234565.1	+	processed_pseudogene	KNOWN	COX6B1P1	1	1	0.690070
chr7	149069643	149090782	149080212	ENSG00000197362.13	-	protein_coding	KNOWN	ZNF786	3	4	0.392848
chr7	149102784	149126346	149114565	ENSG00000204947.8	-	protein_coding	KNOWN	ZNF425	4	4	0.385930
chr7	149125690	149125986	149125838	ENSG00000240877.3	-	misc_RNA	KNOWN	RN7SL521P	1	1	0.451534
chr7	149126416	149182802	149154609	ENSG00000197024.8	+	protein_coding	KNOWN	ZNF398	5	7	0.391373
chr7	149191043	149191223	149191133	ENSG00000239719.1	-	processed_pseudogene	KNOWN	RP4-800G7.1	1	1	0.533025
chr7	149195485	149226248	149210866	ENSG00000170265.11	+	protein_coding	KNOWN	ZNF282	4	9	0.668612
chr7	149239651	149255609	149247630	ENSG00000170260.8	+	protein_coding	KNOWN	ZNF212	5	5	0.391961
chr7	149262171	149297302	149279736	ENSG00000204946.9	+	protein_coding	KNOWN	ZNF783	5	14	0.619736
chr7	149275619	149277992	149276805	ENSG00000271664.1	-	unprocessed_pseudogene	KNOWN	RP4-800G7.3	1	4	0.713058
chr7	149285281	149297312	149291296	ENSG00000244560.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP4-800G7.2	6	10	0.650694
chr7	149321865	149322092	149321978	ENSG00000231397.1	-	processed_pseudogene	KNOWN	AC004941.5	1	1	0.091992
chr7	149334024	149334857	149334440	ENSG00000215311.3	+	processed_pseudogene	KNOWN	NPM1P12	1	1	-0.091315
chr7	149398204	149401456	149399830	ENSG00000228151.1	+	antisense	KNOWN	AC004941.3	1	2	0.117527
chr7	149422675	149424890	149423782	ENSG00000261842.1	+	lincRNA	KNOWN	RP11-143I21.1	1	1	0.083954
chr7	149431363	149461123	149446243	ENSG00000196453.7	-	protein_coding	KNOWN	ZNF777	1	6	0.387390
chr7	149472794	149497817	149485305	ENSG00000181220.15	-	protein_coding	KNOWN	ZNF746	4	7	0.496365
chr7	149541747	149541846	149541796	ENSG00000280992.1	-	miRNA	NOVEL	AC004932.1	1	1	-0.446428
chr7	149547154	149624752	149585953	ENSG00000133624.13	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF767P	6	9	0.272618
chr7	149714781	149734575	149724678	ENSG00000133619.17	+	protein_coding	KNOWN	KRBA1	9	17	0.345250
chr7	149764182	149773479	149768830	ENSG00000181444.12	-	protein_coding	KNOWN	ZNF467	2	5	0.529282
chr7	149776042	149833979	149805010	ENSG00000197558.11	+	protein_coding	KNOWN	SSPO	11	107	0.722377
chr7	149838367	149867479	149852923	ENSG00000106479.10	+	protein_coding	KNOWN	ZNF862	6	8	0.763979
chr7	149851572	149852170	149851871	ENSG00000280149.1	+	TEC	KNOWN	RP4-751H13.5	1	1	0.475597
chr7	149858400	149862492	149860446	ENSG00000273419.1	-	antisense	KNOWN	RP4-751H13.7	1	1	0.475597
chr7	149867697	149880610	149874153	ENSG00000204934.10	-	antisense	KNOWN	ATP6V0E2-AS1	3	4	0.448391
chr7	149872968	149880698	149876833	ENSG00000171130.17	+	protein_coding	KNOWN	ATP6V0E2	13	5	0.442489
chr7	149881359	149881580	149881469	ENSG00000273293.1	-	lincRNA	KNOWN	RP11-445N20.3	1	1	0.442489
chr7	149881477	149882105	149881791	ENSG00000279536.1	+	TEC	KNOWN	RP11-445N20.2	1	1	0.442489
chr7	149890739	149891416	149891077	ENSG00000273011.1	+	lincRNA	KNOWN	RP11-728K20.3	1	1	0.128891
chr7	149891191	149909704	149900447	ENSG00000224016.2	-	unprocessed_pseudogene	KNOWN	RP11-728K20.1	1	3	0.128891
chr7	150000752	150005124	150002938	ENSG00000260555.1	+	lincRNA	KNOWN	RP11-728K20.2	1	2	-0.073498
chr7	150040521	150076655	150058588	ENSG00000241449.5	+	lincRNA	KNOWN	RP11-545G3.1	3	5	0.055055
chr7	150047609	150047854	150047731	ENSG00000276538.1	-	unprocessed_pseudogene	KNOWN	RP11-545G3.2	1	1	0.202416
chr7	150079905	150079993	150079949	ENSG00000280676.1	-	miRNA	NOVEL	AC092666.1	1	1	-0.265771
chr7	150243916	150323725	150283820	ENSG00000106526.10	-	protein_coding	KNOWN	ACTR3C	6	8	0.052875
chr7	150322639	150338150	150330394	ENSG00000127399.14	+	protein_coding	KNOWN	LRRC61	5	4	0.219924
chr7	150329789	150332721	150331255	ENSG00000188707.5	+	protein_coding	KNOWN	ZBED6CL	1	1	0.351356
chr7	150338317	150341674	150339995	ENSG00000106538.9	-	protein_coding	KNOWN	RARRES2	5	6	0.374722
chr7	150341771	150342607	150342189	ENSG00000261305.1	+	sense_overlapping	KNOWN	RP4-584D14.7	1	1	0.374722
chr7	150363777	150372590	150368183	ENSG00000240449.1	-	antisense	KNOWN	RP4-584D14.5	1	3	0.567106
chr7	150368189	150374044	150371116	ENSG00000214022.11	+	protein_coding	KNOWN	REPIN1	19	4	0.594147
chr7	150368790	150410597	150389693	ENSG00000196456.9	+	protein_coding	KNOWN	ZNF775	5	3	0.639967
chr7	150379854	150383885	150381869	ENSG00000239377.1	-	antisense	KNOWN	RP4-584D14.6	1	2	0.615211
chr7	150400702	150412470	150406586	ENSG00000283013.1	+	protein_coding	KNOWN	RP11-511P7.5	7	3	0.658902
chr7	150433654	150448140	150440897	ENSG00000242258.1	+	lincRNA	KNOWN	LINC00996	2	4	0.389828
chr7	150450630	150479392	150465011	ENSG00000171115.3	+	protein_coding	KNOWN	GIMAP8	1	5	0.063257
chr7	150484061	150485135	150484598	ENSG00000271582.1	-	processed_pseudogene	KNOWN	RP11-511P7.4	1	1	0.018411
chr7	150512559	150513839	150513199	ENSG00000213205.3	-	processed_pseudogene	KNOWN	STRADBP1	1	1	-0.265821
chr7	150514830	150521073	150517951	ENSG00000179144.4	+	protein_coding	KNOWN	GIMAP7	1	2	-0.265821
chr7	150541754	150542098	150541926	ENSG00000243853.1	-	processed_pseudogene	KNOWN	ALDH7A1P3	1	1	-0.293298
chr7	150567277	150573955	150570616	ENSG00000133574.9	+	protein_coding	KNOWN	GIMAP4	5	3	-0.064395
chr7	150603561	150604644	150604102	ENSG00000271568.1	-	processed_pseudogene	KNOWN	RP11-632K21.7	1	1	-0.007544
chr7	150614061	150614764	150614412	ENSG00000232361.3	-	processed_pseudogene	KNOWN	RP11-632K21.3	1	1	-0.101888
chr7	150625375	150632648	150629011	ENSG00000133561.15	-	protein_coding	KNOWN	GIMAP6	3	3	-0.049930
chr7	150676833	150677918	150677375	ENSG00000270990.1	-	processed_pseudogene	KNOWN	RP11-632K21.6	1	4	-0.023485
chr7	150685697	150693641	150689669	ENSG00000106560.10	+	protein_coding	KNOWN	GIMAP2	3	3	-0.011896
chr7	150716557	150724284	150720420	ENSG00000213203.2	+	protein_coding	KNOWN	GIMAP1	2	3	-0.107317
chr7	150716668	150743646	150730157	ENSG00000281887.3	+	protein_coding	KNOWN	GIMAP1-GIMAP5	1	6	-0.069267
chr7	150722253	150750033	150736143	ENSG00000196329.11	+	protein_coding	KNOWN	GIMAP5	7	4	-0.053050
chr7	150746893	150747728	150747310	ENSG00000177590.7	-	processed_pseudogene	KNOWN	GIMAP3P	1	1	-0.032099
chr7	150749736	150750094	150749915	ENSG00000241134.3	+	processed_pseudogene	KNOWN	BET1P1	1	1	-0.027221
chr7	150791285	150801360	150796322	ENSG00000106565.17	-	protein_coding	KNOWN	TMEM176B	6	8	0.126425
chr7	150800403	150805120	150802761	ENSG00000002933.7	+	protein_coding	KNOWN	TMEM176A	11	7	0.126425
chr7	150824627	150861504	150843065	ENSG00000002726.19	+	protein_coding	KNOWN	AOC1	9	12	0.100165
chr7	150944961	150978315	150961638	ENSG00000055118.14	-	protein_coding	KNOWN	KCNH2	6	15	0.573207
chr7	150990995	151014588	151002791	ENSG00000164867.10	+	protein_coding	KNOWN	NOS3	10	27	0.744295
chr7	151012209	151024499	151018354	ENSG00000181652.18	-	protein_coding	KNOWN	ATG9B	11	18	1.023170
chr7	151028422	151047782	151038102	ENSG00000197150.12	+	protein_coding	KNOWN	ABCB8	22	17	0.988837
chr7	151028781	151029754	151029267	ENSG00000243433.1	-	antisense	KNOWN	RP11-148K1.10	1	2	1.023170
chr7	151048292	151052756	151050524	ENSG00000213199.7	+	protein_coding	KNOWN	ASIC3	9	11	1.190265
chr7	151053812	151058530	151056171	ENSG00000164885.12	-	protein_coding	KNOWN	CDK5	5	12	1.316865
chr7	151057210	151076527	151066868	ENSG00000164889.12	+	protein_coding	KNOWN	SLC4A2	20	23	1.314282
chr7	151074742	151076530	151075636	ENSG00000244151.1	-	antisense	KNOWN	RP11-148K1.12	1	2	1.309223
chr7	151076593	151080866	151078729	ENSG00000164896.19	-	protein_coding	KNOWN	FASTK	17	10	1.309223
chr7	151081080	151083546	151082313	ENSG00000164897.12	-	protein_coding	KNOWN	TMUB1	7	3	1.309223
chr7	151085831	151144436	151115133	ENSG00000133612.18	+	protein_coding	KNOWN	AGAP3	26	19	1.130987
chr7	151148589	151174745	151161667	ENSG00000164900.4	-	protein_coding	KNOWN	GBX1	2	3	0.919632
chr7	151175698	151187832	151181765	ENSG00000146926.10	-	protein_coding	KNOWN	ASB10	4	6	0.617819
chr7	151190873	151205496	151198184	ENSG00000278685.4	-	protein_coding	KNOWN	IQCA1L	3	19	1.190347
chr7	151207837	151227230	151217533	ENSG00000033050.7	-	protein_coding	KNOWN	ABCF2	6	16	0.892876
chr7	151232489	151238827	151235658	ENSG00000033100.14	+	protein_coding	KNOWN	CHPF2	4	5	0.813527
chr7	151238421	151238538	151238479	ENSG00000211517.1	+	miRNA	KNOWN	MIR671	1	1	0.813527
chr7	151238764	151277896	151258330	ENSG00000082014.16	-	protein_coding	KNOWN	SMARCD3	15	14	1.168817
chr7	151240399	151240972	151240685	ENSG00000272661.1	+	antisense	KNOWN	RP4-548D19.3	1	1	0.813527
chr7	151249325	151254390	151251857	ENSG00000243018.1	+	antisense	KNOWN	RP5-1070G24.2	1	2	1.387581
chr7	151341699	151378449	151360074	ENSG00000013374.15	+	protein_coding	KNOWN	NUB1	12	15	0.629730
chr7	151375909	151410727	151393318	ENSG00000187260.15	-	protein_coding	KNOWN	WDR86	8	6	0.903556
chr7	151409161	151413354	151411257	ENSG00000243836.5	+	processed_transcript	KNOWN	WDR86-AS1	4	6	0.728942
chr7	151427683	151439124	151433403	ENSG00000241456.1	+	antisense	KNOWN	RP4-555L14.4	1	2	0.648567
chr7	151428835	151440813	151434824	ENSG00000127377.8	-	protein_coding	KNOWN	CRYGN	5	4	0.648472
chr7	151433489	151433639	151433564	ENSG00000265810.1	-	miRNA	KNOWN	MIR3907	1	1	0.648385
chr7	151464650	151464938	151464794	ENSG00000241959.3	-	misc_RNA	KNOWN	RN7SL76P	1	1	0.872679
chr7	151466012	151520120	151493066	ENSG00000106615.9	-	protein_coding	KNOWN	RHEB	7	9	0.461033
chr7	151501878	151503463	151502670	ENSG00000240132.1	+	processed_pseudogene	KNOWN	ETF1P2	1	1	0.304212
chr7	151556111	151877125	151716618	ENSG00000106617.13	-	protein_coding	KNOWN	PRKAG2	16	16	0.555747
chr7	151806490	151810820	151808655	ENSG00000242048.3	+	processed_transcript	KNOWN	RP13-452N2.1	2	3	0.506503
chr7	151877042	151879223	151878132	ENSG00000239911.2	+	antisense	KNOWN	PRKAG2-AS1	2	3	0.513693
chr7	151900275	151900374	151900324	ENSG00000212219.1	+	snRNA	KNOWN	RNU6-604P	1	1	0.348006
chr7	151916331	151916418	151916374	ENSG00000222941.2	+	misc_RNA	NOVEL	Y_RNA	1	1	0.007329
chr7	151950386	151954985	151952685	ENSG00000227562.1	-	antisense	KNOWN	RP11-796I2.1	1	2	0.008663
chr7	151956379	152019934	151988156	ENSG00000106648.13	+	protein_coding	KNOWN	GALNTL5	11	12	0.116363
chr7	152025194	152025472	152025333	ENSG00000276213.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.075019
chr7	152025674	152122347	152074010	ENSG00000178234.12	+	protein_coding	KNOWN	GALNT11	13	14	0.170732
chr7	152120001	152121717	152120859	ENSG00000229591.1	-	antisense	KNOWN	RP5-981O7.2	1	2	0.048403
chr7	152128879	152129686	152129282	ENSG00000213188.3	+	processed_pseudogene	KNOWN	YBX1P4	1	1	0.048403
chr7	152134922	152436005	152285463	ENSG00000055609.17	-	protein_coding	KNOWN	KMT2C	13	59	0.034342
chr7	152267507	152267611	152267559	ENSG00000278435.1	-	miRNA	NOVEL	AC104692.1	1	1	-0.231357
chr7	152366763	152367015	152366889	ENSG00000270405.1	+	processed_pseudogene	KNOWN	RP11-208G20.3	1	1	0.082890
chr7	152367171	152367260	152367215	ENSG00000204894.4	+	processed_pseudogene	KNOWN	RP11-208G20.2	1	1	0.082890
chr7	152367519	152368661	152368090	ENSG00000241007.1	+	processed_pseudogene	KNOWN	SEPT7P6	1	1	0.082890
chr7	152402780	152402893	152402836	ENSG00000253088.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.013989
chr7	152436895	152443187	152440041	ENSG00000241735.1	+	transcribed_processed_pseudogene	KNOWN	FABP5P3	2	2	0.151934
chr7	152439221	152439308	152439264	ENSG00000221454.1	+	miRNA	NOVEL	AC005631.1	1	1	0.151934
chr7	152445477	152447150	152446313	ENSG00000020219.9	+	processed_pseudogene	KNOWN	CCT8L1P	1	1	0.151934
chr7	152463786	152465549	152464667	ENSG00000261455.1	+	lincRNA	KNOWN	LINC01003	1	1	0.148894
chr7	152590641	152590941	152590791	ENSG00000231139.1	-	unprocessed_pseudogene	KNOWN	AC104843.4	1	2	0.208185
chr7	152592973	152593091	152593032	ENSG00000199404.1	-	rRNA	KNOWN	RNA5SP250	1	1	0.208185
chr7	152602213	152602892	152602552	ENSG00000225416.1	-	processed_pseudogene	KNOWN	AC104843.3	1	2	0.208185
chr7	152609313	152609434	152609373	ENSG00000212590.1	+	snoRNA	NOVEL	SNORA26	1	1	0.208185
chr7	152644779	152676165	152660472	ENSG00000196584.2	-	protein_coding	KNOWN	XRCC2	2	3	-0.003385
chr7	152749079	152749735	152749407	ENSG00000214003.2	+	processed_pseudogene	KNOWN	ATP5F1P3	1	1	0.091992
chr7	152757662	152757951	152757806	ENSG00000244328.3	+	misc_RNA	KNOWN	RN7SL845P	1	1	0.057844
chr7	152759749	152855378	152807563	ENSG00000133627.17	+	protein_coding	KNOWN	ACTR3B	5	12	0.076153
chr7	153056737	153056819	153056778	ENSG00000265275.1	+	miRNA	NOVEL	AF104455.1	1	1	0.066606
chr7	153144313	153144588	153144450	ENSG00000224104.1	-	processed_pseudogene	KNOWN	AC079809.2	1	1	-0.333538
chr7	153399920	153413963	153406941	ENSG00000234722.3	-	lincRNA	KNOWN	LINC01287	3	4	-0.325239
chr7	153449429	153449875	153449652	ENSG00000233489.1	+	processed_pseudogene	KNOWN	PAXBP1P1	1	1	-0.098530
chr7	153887097	154894285	154390691	ENSG00000130226.16	+	protein_coding	KNOWN	DPP6	16	26	-0.091185
chr7	153968665	153968826	153968745	ENSG00000226509.1	-	processed_pseudogene	KNOWN	AC005588.2	1	1	-0.096618
chr7	154020657	154020737	154020697	ENSG00000281640.1	+	miRNA	NOVEL	AC006019.1	1	1	-0.219095
chr7	154026287	154038604	154032445	ENSG00000270114.1	-	antisense	KNOWN	RP5-1048B16.1	1	3	-0.170564
chr7	154055585	154059561	154057573	ENSG00000203335.4	-	antisense	KNOWN	AC006019.3	1	2	0.163942
chr7	154092201	154096043	154094122	ENSG00000233363.1	-	antisense	KNOWN	AC006019.4	1	2	-0.076046
chr7	154838388	154865483	154851935	ENSG00000236408.1	-	antisense	KNOWN	RP11-476H24.1	1	2	0.201812
chr7	154928498	154949908	154939203	ENSG00000214106.7	+	antisense	KNOWN	PAXIP1-AS2	3	8	0.105858
chr7	154943687	155003084	154973385	ENSG00000157212.18	-	protein_coding	KNOWN	PAXIP1	9	22	-0.198105
chr7	154951226	154952188	154951707	ENSG00000272760.1	+	antisense	KNOWN	RP11-5C23.1	1	1	-0.219469
chr7	154956429	154957107	154956768	ENSG00000273183.1	+	antisense	KNOWN	RP11-5C23.2	1	1	-0.219469
chr7	155003448	155005703	155004575	ENSG00000273344.1	+	lincRNA	KNOWN	PAXIP1-AS1	1	1	-0.279977
chr7	155067067	155071557	155069312	ENSG00000220575.7	-	antisense	KNOWN	HTR5A-AS1	2	2	0.004116
chr7	155070324	155085749	155078036	ENSG00000157219.3	+	protein_coding	KNOWN	HTR5A	2	2	-0.269563
chr7	155106062	155106400	155106231	ENSG00000274637.1	-	unprocessed_pseudogene	KNOWN	RP11-279O22.1	1	1	-0.078849
chr7	155106400	155106651	155106525	ENSG00000228806.1	+	unprocessed_pseudogene	KNOWN	AC092628.3	1	1	-0.078849
chr7	155181881	155182184	155182032	ENSG00000201066.1	+	misc_RNA	KNOWN	RN7SKP280	1	1	-0.192985
chr7	155196563	155198455	155197509	ENSG00000217825.2	-	lincRNA	KNOWN	AC099552.4	2	3	0.249821
chr7	155204147	155205189	155204668	ENSG00000228521.2	+	lincRNA	KNOWN	AC099552.3	1	2	0.249821
chr7	155222903	155223851	155223377	ENSG00000278998.1	+	TEC	KNOWN	RP11-1430O6.1	1	1	0.409076
chr7	155267299	155268052	155267675	ENSG00000225612.1	+	lincRNA	KNOWN	AC099552.2	1	3	0.296610
chr7	155295918	155297541	155296729	ENSG00000273117.1	-	lincRNA	KNOWN	AC144652.1	1	1	0.341807
chr7	155297776	155310235	155304005	ENSG00000186480.12	+	protein_coding	KNOWN	INSIG1	6	6	0.336923
chr7	155356985	155367934	155362459	ENSG00000204960.6	-	protein_coding	KNOWN	BLACE	2	6	0.381498
chr7	155382076	155396356	155389216	ENSG00000218672.1	+	lincRNA	KNOWN	AC008060.7	1	2	0.287993
chr7	155399922	155401782	155400852	ENSG00000260426.1	+	sense_overlapping	KNOWN	RP5-912I13.1	1	1	0.319402
chr7	155421206	155457099	155439152	ENSG00000236544.1	-	lincRNA	KNOWN	AC008060.8	1	3	0.350236
chr7	155458129	155464831	155461480	ENSG00000164778.4	+	protein_coding	KNOWN	EN2	1	2	0.281470
chr7	155474206	155533862	155504034	ENSG00000146910.11	-	protein_coding	KNOWN	CNPY1	2	5	0.013210
chr7	155478232	155478369	155478300	ENSG00000280862.1	+	miRNA	NOVEL	AC008060.1	1	1	0.119473
chr7	155510283	155518623	155514453	ENSG00000227365.1	+	antisense	KNOWN	AC008060.5	1	2	-0.366547
chr7	155611231	155645205	155628218	ENSG00000216895.8	-	antisense	KNOWN	AC009403.2	5	3	0.015582
chr7	155644451	155781485	155712968	ENSG00000184863.10	+	protein_coding	KNOWN	RBM33	10	18	0.031700
chr7	155799986	155812273	155806129	ENSG00000164690.7	-	protein_coding	KNOWN	SHH	5	5	0.570417
chr7	155871891	155872007	155871949	ENSG00000221113.1	+	miRNA	NOVEL	AC104133.1	1	1	-0.071198
chr7	155962632	155966343	155964487	ENSG00000204876.4	+	lincRNA	KNOWN	AC021218.2	1	2	0.091992
chr7	156186122	156186223	156186172	ENSG00000207061.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.043082
chr7	156263547	156263802	156263674	ENSG00000270584.1	+	processed_pseudogene	KNOWN	RP11-362B23.1	1	1	-0.479165
chr7	156432523	156435833	156434178	ENSG00000228569.1	-	lincRNA	KNOWN	AC073133.2	1	2	-0.503777
chr7	156437789	156445588	156441688	ENSG00000233878.1	-	lincRNA	KNOWN	AC073133.1	1	3	-0.503777
chr7	156472196	156640654	156556425	ENSG00000182648.11	-	lincRNA	KNOWN	LINC01006	8	4	-0.079076
chr7	156540491	156541103	156540797	ENSG00000279418.1	+	lincRNA	KNOWN	LINC00244	1	1	0.004044
chr7	156633355	156633787	156633571	ENSG00000234450.1	+	processed_pseudogene	KNOWN	AC005534.6	1	1	-0.285710
chr7	156640281	156677130	156658705	ENSG00000105982.16	+	protein_coding	KNOWN	RNF32	14	10	-0.124708
chr7	156654185	156657693	156655939	ENSG00000224903.1	-	antisense	KNOWN	AC005534.8	1	2	-0.048329
chr7	156668946	156893230	156781088	ENSG00000105983.19	-	protein_coding	KNOWN	LMBR1	21	19	-0.189727
chr7	156872078	156872218	156872148	ENSG00000206938.1	+	snRNA	KNOWN	RNU4-31P	1	1	-0.435023
chr7	156944721	156945645	156945183	ENSG00000230033.1	+	lincRNA	KNOWN	RP5-1121A15.3	1	2	0.293988
chr7	156949723	156973182	156961452	ENSG00000146909.7	+	protein_coding	KNOWN	NOM1	8	11	0.512479
chr7	156994051	157010651	157002351	ENSG00000130675.14	-	protein_coding	KNOWN	MNX1	8	3	-0.010053
chr7	157006307	157007132	157006719	ENSG00000235029.1	+	antisense	KNOWN	MNX1-AS2	1	2	-0.037291
chr7	157010805	157016426	157013615	ENSG00000243479.3	+	lincRNA	KNOWN	MNX1-AS1	1	2	0.656196
chr7	157057709	157058514	157058111	ENSG00000236102.2	-	lincRNA	KNOWN	RP4-639J15.1	1	2	0.268242
chr7	157087955	157088543	157088249	ENSG00000229365.3	-	processed_pseudogene	KNOWN	RP4-639J15.2	1	1	-0.082213
chr7	157109980	157111072	157110526	ENSG00000269446.2	+	lincRNA	KNOWN	RP4-639J15.3	1	1	-0.104245
chr7	157138913	157269372	157204142	ENSG00000009335.17	+	protein_coding	KNOWN	UBE3C	9	23	0.141363
chr7	157192368	157192832	157192600	ENSG00000225224.1	+	processed_pseudogene	KNOWN	RP4-814D15.2	1	1	-0.048489
chr7	157197600	157198511	157198055	ENSG00000236018.2	-	processed_pseudogene	KNOWN	RP4-814D15.1	1	2	-0.048489
chr7	157263022	157263229	157263125	ENSG00000224629.1	-	processed_pseudogene	KNOWN	RP5-1142J19.2	1	1	0.289722
chr7	157281536	157282686	157282111	ENSG00000229660.1	-	lincRNA	KNOWN	RP5-1142J19.1	1	2	0.632560
chr7	157335381	157417439	157376410	ENSG00000105993.14	+	protein_coding	KNOWN	DNAJB6	18	10	0.528537
chr7	157466231	157499716	157482973	ENSG00000234210.1	+	lincRNA	KNOWN	AC006372.4	1	4	0.228082
chr7	157501322	157503577	157502449	ENSG00000223872.1	+	lincRNA	KNOWN	AC006372.5	1	3	0.244762
chr7	157513294	157516841	157515067	ENSG00000233191.1	+	antisense	KNOWN	AC006372.6	1	3	0.225258
chr7	157525783	157527325	157526554	ENSG00000280266.1	+	TEC	KNOWN	RP11-331D5.2	1	1	0.225258
chr7	157539056	158587788	158063422	ENSG00000155093.17	-	protein_coding	KNOWN	PTPRN2	5	23	0.236697
chr7	157574336	157574422	157574379	ENSG00000207960.1	-	miRNA	KNOWN	MIR153-2	1	1	0.153684
chr7	157614023	157618765	157616394	ENSG00000222012.1	+	antisense	KNOWN	AC005481.5	1	2	0.226477
chr7	157739010	157740456	157739733	ENSG00000231515.1	-	sense_intronic	KNOWN	AC006003.3	1	2	0.356265
chr7	157854529	157866092	157860310	ENSG00000233038.5	+	antisense	KNOWN	AC011899.9	4	4	0.568957
chr7	157868538	157869154	157868846	ENSG00000272839.1	+	antisense	KNOWN	RP11-452C13.1	1	1	0.568957
chr7	158027373	158031128	158029250	ENSG00000231980.1	+	antisense	KNOWN	AC011899.10	1	2	0.340404
chr7	158532718	158532813	158532765	ENSG00000207637.1	-	miRNA	KNOWN	MIR595	1	1	0.225848
chr7	158537495	158539879	158538687	ENSG00000225365.1	+	antisense	KNOWN	AC078942.1	1	2	0.225848
chr7	158590629	158591120	158590874	ENSG00000232715.1	+	antisense	KNOWN	LINC01022	1	2	-0.004970
chr7	158591616	158591696	158591656	ENSG00000265598.1	+	miRNA	KNOWN	MIR5707	1	1	-0.004970
chr7	158623188	158623449	158623318	ENSG00000224324.1	-	processed_pseudogene	KNOWN	THAP5P1	1	1	0.099811
chr7	158631311	158704829	158668070	ENSG00000146918.19	-	protein_coding	KNOWN	NCAPG2	11	30	0.104207
chr7	158719730	158720161	158719945	ENSG00000228030.2	+	processed_pseudogene	KNOWN	AC019084.7	1	1	0.314384
chr7	158730995	158830253	158780624	ENSG00000117868.15	-	protein_coding	KNOWN	ESYT2	6	24	0.297226
chr7	158856578	158956747	158906662	ENSG00000126870.15	+	protein_coding	KNOWN	WDR60	5	25	0.243991
chr7	159006522	159030195	159018358	ENSG00000231419.6	+	processed_transcript	KNOWN	LINC00689	4	5	0.365171
chr7	159028175	159144957	159086566	ENSG00000106018.13	-	protein_coding	KNOWN	VIPR2	4	13	0.117546
chr7	159231435	159233377	159232406	ENSG00000229435.2	+	unprocessed_pseudogene	KNOWN	PIP5K1P2	1	3	-0.064127
chr8	64091	64320	64205	ENSG00000253620.2	-	processed_pseudogene	KNOWN	AC144568.4	1	2	0.000000
chr8	72601	79775	76188	ENSG00000253896.3	+	lincRNA	KNOWN	AC144568.2	2	2	0.116654
chr8	150584	150728	150656	ENSG00000254193.1	-	processed_pseudogene	KNOWN	RP11-585F1.8	1	1	0.234244
chr8	155274	155481	155377	ENSG00000253612.1	+	processed_pseudogene	KNOWN	WBP1LP3	1	1	0.234244
chr8	166049	167043	166546	ENSG00000176269.3	-	protein_coding	KNOWN	OR4F21	1	1	0.234244
chr8	200385	200562	200473	ENSG00000255464.1	-	unprocessed_pseudogene	KNOWN	SEPT14P8	1	1	-0.276876
chr8	202660	202897	202778	ENSG00000253166.2	-	unprocessed_pseudogene	KNOWN	RP11-585F1.6	1	2	-0.276876
chr8	213186	232231	222708	ENSG00000223508.5	-	transcribed_processed_pseudogene	KNOWN	RPL23AP53	3	3	0.169765
chr8	232137	247342	239739	ENSG00000172748.12	+	protein_coding	KNOWN	ZNF596	12	6	0.204467
chr8	233119	233692	233405	ENSG00000272812.1	+	sense_intronic	KNOWN	RP5-855D21.3	1	1	0.204467
chr8	234347	234887	234617	ENSG00000272240.1	-	antisense	KNOWN	RP5-855D21.1	1	1	0.204467
chr8	237045	237669	237357	ENSG00000273402.1	+	antisense	KNOWN	RP5-855D21.2	1	1	0.204467
chr8	264315	264672	264493	ENSG00000254104.2	+	processed_pseudogene	KNOWN	RP11-63E5.1	1	1	-0.121522
chr8	311133	331026	321079	ENSG00000249868.5	-	lincRNA	KNOWN	RP11-63E5.6	1	3	0.169135
chr8	375931	383174	379552	ENSG00000182366.9	-	lincRNA	KNOWN	FAM87A	4	4	0.279807
chr8	406428	477967	442197	ENSG00000147364.16	+	protein_coding	KNOWN	FBXO25	10	11	0.125618
chr8	450714	451343	451028	ENSG00000272293.1	-	antisense	KNOWN	RP11-91J19.3	1	1	0.168749
chr8	486117	488512	487314	ENSG00000279852.1	-	TEC	KNOWN	RP11-91J19.2	1	1	0.106347
chr8	489792	545781	517786	ENSG00000180190.11	-	protein_coding	KNOWN	TDRP	5	5	0.064336
chr8	614746	738106	676426	ENSG00000104714.13	-	protein_coding	KNOWN	ERICH1	11	6	0.383294
chr8	725188	725877	725532	ENSG00000254207.1	-	sense_intronic	KNOWN	RP11-43A14.1	1	2	0.297934
chr8	737651	1137777	937714	ENSG00000237647.8	+	antisense	KNOWN	ERICH1-AS1	5	4	0.076129
chr8	738548	740374	739461	ENSG00000282375.1	+	lincRNA	KNOWN	RP11-43A14.2	1	1	0.608475
chr8	891251	893112	892181	ENSG00000282759.1	-	lincRNA	KNOWN	RP11-555E9.1	1	2	0.355026
chr8	1018757	1019704	1019230	ENSG00000282692.1	+	lincRNA	KNOWN	CTD-3212A4.2	1	1	0.053772
chr8	1104882	1262580	1183731	ENSG00000254269.5	+	processed_transcript	KNOWN	CTD-2281E23.2	3	4	0.090403
chr8	1246789	1248760	1247774	ENSG00000254160.1	-	lincRNA	KNOWN	CTD-2281E23.3	1	3	-0.388813
chr8	1296034	1302607	1299320	ENSG00000275427.1	-	lincRNA	KNOWN	CTD-2281E23.1	1	3	0.237109
chr8	1368642	1369833	1369237	ENSG00000260721.1	-	lincRNA	KNOWN	AF067845.1	1	1	0.163153
chr8	1373685	1381394	1377539	ENSG00000282160.1	+	lincRNA	KNOWN	AF067845.2	1	2	0.211992
chr8	1377867	1380307	1379087	ENSG00000281961.1	+	lincRNA	KNOWN	AF067845.3	1	3	0.211992
chr8	1501366	1708476	1604921	ENSG00000198010.11	+	protein_coding	KNOWN	DLGAP2	6	12	0.042296
chr8	1565509	1622417	1593963	ENSG00000253267.5	-	antisense	KNOWN	DLGAP2-AS1	2	4	-0.038268
chr8	1730206	1731452	1730829	ENSG00000254265.1	+	processed_pseudogene	KNOWN	CTD-2336O2.2	1	2	-0.023485
chr8	1755778	1786572	1771175	ENSG00000182372.7	+	protein_coding	KNOWN	CLN8	7	3	0.538432
chr8	1758208	1760447	1759327	ENSG00000282021.1	-	lincRNA	KNOWN	CTD-2336O2.3	1	1	0.443464
chr8	1761990	1764502	1763246	ENSG00000253982.1	-	antisense	KNOWN	CTD-2336O2.1	3	2	0.443464
chr8	1817231	1817307	1817269	ENSG00000207826.1	+	miRNA	KNOWN	MIR596	1	1	0.473500
chr8	1823976	1958641	1891308	ENSG00000104728.15	+	protein_coding	KNOWN	ARHGEF10	15	30	0.470256
chr8	1971397	1976478	1973937	ENSG00000253696.2	+	lincRNA	KNOWN	KBTBD11-OT1	1	3	0.403700
chr8	1972570	1974637	1973603	ENSG00000253764.1	-	lincRNA	KNOWN	RP11-439C15.4	2	3	0.403700
chr8	1973878	2006936	1990407	ENSG00000176595.3	+	protein_coding	KNOWN	KBTBD11	1	2	0.390435
chr8	1974818	1975314	1975066	ENSG00000270988.1	+	lincRNA	KNOWN	RP11-439C15.5	1	1	0.403700
chr8	2033508	2035587	2034547	ENSG00000253805.1	+	lincRNA	KNOWN	RP11-1049H7.2	1	2	0.120847
chr8	2045040	2165552	2105296	ENSG00000036448.9	+	protein_coding	KNOWN	MYOM2	15	37	0.024756
chr8	2076589	2076640	2076614	ENSG00000273593.1	+	miRNA	KNOWN	MIR7160	1	1	0.099223
chr8	2493876	2512580	2503228	ENSG00000253444.1	-	lincRNA	KNOWN	AC133633.2	1	3	-0.274689
chr8	2495522	2499428	2497475	ENSG00000282686.1	+	lincRNA	KNOWN	CH17-31A6.1	1	3	-0.272581
chr8	2517898	2529710	2523804	ENSG00000282142.1	-	lincRNA	KNOWN	CH17-174L20.1	1	3	-0.287856
chr8	2518998	2522182	2520590	ENSG00000253855.1	+	lincRNA	KNOWN	AC133633.1	1	3	-0.287856
chr8	2589985	2623382	2606683	ENSG00000277526.4	-	lincRNA	KNOWN	RP11-378A12.1	2	5	-0.278991
chr8	2666079	2728451	2697265	ENSG00000254319.5	-	lincRNA	KNOWN	RP11-134O21.1	6	5	-0.339989
chr8	2727318	2822482	2774900	ENSG00000253853.1	+	lincRNA	KNOWN	GS1-57L11.1	1	5	-0.367808
chr8	2935353	4994972	3965162	ENSG00000183117.18	-	protein_coding	KNOWN	CSMD1	18	71	-0.379324
chr8	3121968	3122060	3122014	ENSG00000281850.1	-	miRNA	NOVEL	AC021523.1	1	1	-0.390509
chr8	3373353	3375226	3374289	ENSG00000253162.1	-	sense_intronic	KNOWN	RP11-279L11.1	1	2	-0.581409
chr8	3700492	3700628	3700560	ENSG00000222546.1	+	rRNA	KNOWN	RNA5SP251	1	1	-0.249625
chr8	4787332	4788584	4787958	ENSG00000254244.1	+	processed_pseudogene	KNOWN	PAICSP4	1	1	-0.500584
chr8	5072645	5072869	5072757	ENSG00000253262.1	-	processed_pseudogene	KNOWN	RP11-221H10.1	1	1	-0.647693
chr8	5127919	5128233	5128076	ENSG00000273876.1	-	unprocessed_pseudogene	KNOWN	RP11-221H10.2	1	1	-0.615557
chr8	5128279	5128412	5128345	ENSG00000206661.1	-	snoRNA	NOVEL	SNORA70	1	1	-0.615557
chr8	5142411	5142707	5142559	ENSG00000242079.1	-	misc_RNA	KNOWN	RN7SL318P	1	1	-0.541880
chr8	5363371	5363650	5363510	ENSG00000278256.1	+	unprocessed_pseudogene	KNOWN	RP11-29A2.1	1	1	-0.403966
chr8	5455218	5455665	5455441	ENSG00000271248.1	-	processed_pseudogene	KNOWN	RP11-745K9.2	1	1	-0.344107
chr8	5476548	5476966	5476757	ENSG00000240486.2	+	processed_pseudogene	KNOWN	RPL23AP54	1	1	-0.363460
chr8	5506068	5509126	5507597	ENSG00000253510.1	-	lincRNA	KNOWN	RP5-991O23.1	1	1	-0.337873
chr8	5659679	5670077	5664878	ENSG00000254007.1	-	lincRNA	KNOWN	RP11-281H11.1	1	3	-0.321675
chr8	5716584	5716804	5716694	ENSG00000275461.1	+	unprocessed_pseudogene	KNOWN	RP11-281H11.2	1	1	-0.661848
chr8	5848697	5849692	5849194	ENSG00000253571.1	+	processed_pseudogene	KNOWN	RP11-728L1.1	1	1	-0.073817
chr8	5910945	5911236	5911090	ENSG00000222589.1	-	misc_RNA	KNOWN	RN7SKP159	1	1	-0.467817
chr8	5951206	5951330	5951268	ENSG00000274464.1	-	miRNA	NOVEL	AC079054.1	1	1	-0.314633
chr8	6036433	6036974	6036703	ENSG00000253189.1	-	lincRNA	KNOWN	RP11-158A14.1	1	3	-0.110825
chr8	6044353	6257537	6150945	ENSG00000253880.1	-	lincRNA	KNOWN	RP11-124B13.1	1	5	-0.240993
chr8	6403551	6407142	6405346	ENSG00000246089.3	-	antisense	KNOWN	RP11-115C21.2	3	3	-0.253936
chr8	6406592	6648504	6527548	ENSG00000147316.12	+	protein_coding	KNOWN	MCPH1	7	14	0.159943
chr8	6473845	6474288	6474066	ENSG00000253550.1	-	processed_pseudogene	KNOWN	RP11-115C21.4	1	1	0.031691
chr8	6499651	6563409	6531530	ENSG00000091879.13	-	protein_coding	KNOWN	ANGPT2	4	9	0.205241
chr8	6615604	6617198	6616401	ENSG00000271743.1	-	lincRNA	KNOWN	CTD-2541M15.3	1	1	0.302759
chr8	6618475	6708209	6663342	ENSG00000249898.7	-	antisense	KNOWN	MCPH1-AS1	4	5	0.228792
chr8	6622124	6622220	6622172	ENSG00000276580.1	-	miRNA	KNOWN	MIR8055	1	1	0.302759
chr8	6708357	6759666	6734011	ENSG00000155189.11	+	protein_coding	KNOWN	AGPAT5	7	8	-0.205407
chr8	6745164	6745244	6745204	ENSG00000266038.1	+	miRNA	KNOWN	MIR4659B	1	1	-0.466218
chr8	6808517	6835644	6822080	ENSG00000275591.4	-	protein_coding	KNOWN	XKR5	2	8	0.042928
chr8	6835554	6885276	6860415	ENSG00000245857.2	+	lincRNA	KNOWN	GS1-24F4.2	2	3	0.048068
chr8	6870575	6878022	6874298	ENSG00000164825.3	-	protein_coding	KNOWN	DEFB1	1	2	-0.162822
chr8	6898878	6899468	6899173	ENSG00000250752.2	-	processed_pseudogene	KNOWN	RPL23AP96	1	1	0.091992
chr8	6924693	6926076	6925384	ENSG00000164822.4	-	protein_coding	KNOWN	DEFA6	1	2	-0.129222
chr8	6928608	6930473	6929540	ENSG00000254625.1	+	antisense	KNOWN	GS1-24F4.3	1	3	-0.038464
chr8	6935822	6938338	6937080	ENSG00000164821.4	-	protein_coding	KNOWN	DEFA4	1	3	0.227875
chr8	6950726	6951599	6951162	ENSG00000223629.1	-	unprocessed_pseudogene	KNOWN	DEFA8P	1	2	-0.065289
chr8	6959289	6960161	6959725	ENSG00000233238.1	-	unprocessed_pseudogene	KNOWN	DEFA9P	1	2	-0.065289
chr8	6968141	6969113	6968627	ENSG00000233531.1	-	unprocessed_pseudogene	KNOWN	DEFA10P	1	2	-0.065289
chr8	6977649	6980080	6978864	ENSG00000206047.2	-	protein_coding	KNOWN	DEFA1	2	3	-0.138846
chr8	6987178	6989721	6988449	ENSG00000215378.3	-	unprocessed_pseudogene	KNOWN	DEFT1P	1	3	-0.138846
chr8	6996766	7018289	7007527	ENSG00000240247.6	-	protein_coding	KNOWN	DEFA1B	2	3	-0.014536
chr8	6996837	7018301	7007569	ENSG00000239839.5	-	protein_coding	KNOWN	DEFA3	2	3	-0.015004
chr8	7006293	7007389	7006841	ENSG00000232039.2	-	unprocessed_pseudogene	KNOWN	DEFT1P2	1	2	0.096891
chr8	7028641	7029489	7029065	ENSG00000234178.1	-	unprocessed_pseudogene	KNOWN	DEFA11P	1	2	-0.192402
chr8	7038571	7039439	7039005	ENSG00000206042.1	-	unprocessed_pseudogene	KNOWN	DEFA7P	1	2	-0.106788
chr8	7055304	7056734	7056019	ENSG00000164816.7	-	protein_coding	KNOWN	DEFA5	1	2	-0.369235
chr8	7082971	7083328	7083149	ENSG00000255273.1	+	processed_pseudogene	KNOWN	AF238378.7	1	1	0.068908
chr8	7112314	7113728	7113021	ENSG00000234120.1	-	processed_pseudogene	KNOWN	AF228730.8	1	3	0.083480
chr8	7115899	7116048	7115973	ENSG00000216206.1	-	miRNA	NOVEL	AF228730.1	1	1	0.083480
chr8	7122857	7123704	7123280	ENSG00000228744.1	+	processed_pseudogene	KNOWN	RPS3AP30	1	1	0.083480
chr8	7143632	7143841	7143736	ENSG00000254683.1	-	processed_pseudogene	KNOWN	SNRPCP6	1	1	-0.096865
chr8	7170550	7170741	7170645	ENSG00000230106.1	+	processed_pseudogene	KNOWN	SNRPCP15	1	1	-0.094886
chr8	7190901	7191563	7191232	ENSG00000214268.2	-	processed_pseudogene	KNOWN	RPS3AP33	1	1	-0.284157
chr8	7198440	7198588	7198514	ENSG00000221567.1	+	miRNA	NOVEL	AF228730.2	1	1	-0.284157
chr8	7200756	7200857	7200806	ENSG00000231930.1	+	processed_pseudogene	KNOWN	AF228730.5	1	1	-0.284157
chr8	7238286	7238631	7238458	ENSG00000255025.1	-	processed_pseudogene	KNOWN	AF228730.13	1	1	0.199795
chr8	7246726	7247571	7247148	ENSG00000177306.4	-	unprocessed_pseudogene	KNOWN	OR7E125P	1	1	0.199795
chr8	7256904	7259914	7258409	ENSG00000230045.4	+	unprocessed_pseudogene	KNOWN	FAM90A15P	1	4	0.482782
chr8	7264526	7267536	7266031	ENSG00000233132.4	+	unprocessed_pseudogene	KNOWN	FAM90A3P	1	4	0.482782
chr8	7272148	7275158	7273653	ENSG00000249005.3	+	unprocessed_pseudogene	KNOWN	FAM90A4P	1	4	0.329031
chr8	7279770	7282780	7281275	ENSG00000223885.4	+	unprocessed_pseudogene	KNOWN	FAM90A13P	1	4	0.329031
chr8	7287392	7290402	7288897	ENSG00000215373.4	+	unprocessed_pseudogene	KNOWN	FAM90A5P	1	4	0.299923
chr8	7295014	7298024	7296519	ENSG00000233295.3	+	unprocessed_pseudogene	KNOWN	FAM90A20P	1	4	0.111621
chr8	7301611	7355354	7328482	ENSG00000215374.5	-	lincRNA	KNOWN	FAM66B	2	7	-0.271445
chr8	7312846	7319951	7316398	ENSG00000206034.1	+	unprocessed_pseudogene	KNOWN	DEFB109P1B	1	2	-0.740551
chr8	7332387	7333979	7333183	ENSG00000230549.3	+	protein_coding	KNOWN	USP17L1	1	1	-0.052398
chr8	7337115	7338707	7337911	ENSG00000236125.3	+	protein_coding	KNOWN	USP17L4	1	1	-0.052398
chr8	7341826	7342942	7342384	ENSG00000235778.1	+	unprocessed_pseudogene	KNOWN	AC130360.8	1	1	-0.052398
chr8	7355517	7385558	7370537	ENSG00000215372.6	-	protein_coding	KNOWN	ZNF705G	1	7	-0.021364
chr8	7373114	7377500	7375307	ENSG00000215371.3	+	unprocessed_pseudogene	KNOWN	DEFB108P2	1	2	-0.099374
chr8	7414860	7416863	7415861	ENSG00000177257.2	-	protein_coding	KNOWN	DEFB4B	1	2	-0.169500
chr8	7418991	7420546	7419768	ENSG00000255128.1	+	processed_pseudogene	KNOWN	HSPD1P3	1	1	-0.169500
chr8	7428888	7430348	7429618	ENSG00000177243.3	-	protein_coding	KNOWN	DEFB103B	1	2	-0.159006
chr8	7442684	7463674	7453179	ENSG00000164871.17	-	protein_coding	KNOWN	SPAG11B	9	4	0.090896
chr8	7470308	7475082	7472695	ENSG00000177023.2	-	protein_coding	KNOWN	DEFB104B	1	2	-0.239852
chr8	7482504	7486400	7484452	ENSG00000187082.2	-	protein_coding	KNOWN	DEFB106B	1	2	-0.239852
chr8	7487669	7489593	7488631	ENSG00000186599.7	+	protein_coding	KNOWN	DEFB105B	1	3	-0.239852
chr8	7495846	7509311	7502578	ENSG00000198129.2	+	protein_coding	KNOWN	DEFB107B	1	2	-0.414070
chr8	7539628	7542450	7541039	ENSG00000255251.1	+	protein_coding	KNOWN	PRR23D1	1	4	0.072363
chr8	7549053	7552062	7550557	ENSG00000248944.1	-	unprocessed_pseudogene	KNOWN	FAM90A6P	1	4	0.247087
chr8	7556700	7559712	7558206	ENSG00000236660.6	-	unprocessed_pseudogene	KNOWN	FAM90A7P	1	4	0.327208
chr8	7564350	7567360	7565855	ENSG00000234749.5	-	unprocessed_pseudogene	KNOWN	FAM90A21P	1	4	0.327208
chr8	7571995	7575006	7573500	ENSG00000215365.4	-	unprocessed_pseudogene	KNOWN	FAM90A22P	1	4	-0.050027
chr8	7579644	7582653	7581148	ENSG00000241737.2	-	unprocessed_pseudogene	KNOWN	FAM90A23P	1	4	-0.050027
chr8	7592006	7592916	7592461	ENSG00000233176.3	+	unprocessed_pseudogene	KNOWN	OR7E157P	1	1	0.165992
chr8	7601004	7601267	7601135	ENSG00000254796.1	+	processed_pseudogene	KNOWN	RP11-1118M6.2	1	1	0.165992
chr8	7696830	7697093	7696961	ENSG00000254889.1	-	processed_pseudogene	KNOWN	AC084121.14	1	1	0.284637
chr8	7705182	7706113	7705647	ENSG00000254715.3	-	unprocessed_pseudogene	KNOWN	OR7E154P	1	1	0.284637
chr8	7715443	7718453	7716948	ENSG00000189393.5	+	unprocessed_pseudogene	KNOWN	FAM90A14P	1	4	0.106639
chr8	7723091	7726101	7724596	ENSG00000231656.4	+	unprocessed_pseudogene	KNOWN	FAM90A18P	1	4	0.106639
chr8	7730739	7733749	7732244	ENSG00000229477.3	+	unprocessed_pseudogene	KNOWN	FAM90A16P	1	4	0.848721
chr8	7738387	7741396	7739891	ENSG00000224710.3	+	unprocessed_pseudogene	KNOWN	FAM90A8P	1	4	0.848721
chr8	7746034	7749606	7747820	ENSG00000223535.4	+	unprocessed_pseudogene	KNOWN	FAM90A17P	1	4	0.848721
chr8	7753682	7756692	7755187	ENSG00000237122.3	+	unprocessed_pseudogene	KNOWN	FAM90A19P	1	4	-0.908008
chr8	7761330	7764340	7762835	ENSG00000235825.3	+	unprocessed_pseudogene	KNOWN	FAM90A9P	1	4	-0.908008
chr8	7768977	7771988	7770482	ENSG00000254597.1	+	unprocessed_pseudogene	KNOWN	FAM90A10P	1	4	-0.345766
chr8	7778591	7781413	7780002	ENSG00000255378.1	-	protein_coding	KNOWN	PRR23D2	1	4	-0.056872
chr8	7793716	7795870	7794793	ENSG00000254776.1	-	unprocessed_pseudogene	KNOWN	AC084121.17	1	4	-0.277958
chr8	7811720	7815716	7813718	ENSG00000186572.2	-	protein_coding	KNOWN	DEFB107A	1	2	-0.525288
chr8	7821966	7823889	7822927	ENSG00000186562.7	-	protein_coding	KNOWN	DEFB105A	1	3	-0.525288
chr8	7825172	7829053	7827112	ENSG00000186579.2	+	protein_coding	KNOWN	DEFB106A	1	2	-0.525288
chr8	7836471	7841242	7838856	ENSG00000176782.2	+	protein_coding	KNOWN	DEFB104A	1	2	-0.194531
chr8	7847876	7868867	7858371	ENSG00000178287.17	+	protein_coding	KNOWN	SPAG11A	8	4	-0.506750
chr8	7881204	7882664	7881934	ENSG00000176797.3	+	protein_coding	KNOWN	DEFB103A	1	2	0.233084
chr8	7891003	7892555	7891779	ENSG00000254543.1	-	processed_pseudogene	KNOWN	HSPD1P2	1	1	0.103866
chr8	7894629	7896711	7895670	ENSG00000171711.2	+	protein_coding	KNOWN	DEFB4A	1	2	0.103866
chr8	7926337	7952413	7939375	ENSG00000215356.4	+	protein_coding	KNOWN	ZNF705B	1	7	0.066360
chr8	7934412	7938770	7936591	ENSG00000229907.3	-	unprocessed_pseudogene	KNOWN	DEFB108P1	1	2	0.117083
chr8	7955014	8008755	7981884	ENSG00000225725.4	+	lincRNA	KNOWN	FAM66E	2	8	-0.083140
chr8	7967344	7968544	7967944	ENSG00000255211.1	-	unprocessed_pseudogene	KNOWN	RP11-1195F20.7	1	1	-0.013942
chr8	7971661	7977985	7974823	ENSG00000237038.4	-	protein_coding	KNOWN	USP17L8	2	2	0.219747
chr8	7976393	7977985	7977189	ENSG00000225327.3	-	protein_coding	KNOWN	USP17L3	1	1	0.219747
chr8	7990415	7997521	7993968	ENSG00000205989.1	-	unprocessed_pseudogene	KNOWN	DEFB109P1B	1	2	-0.461401
chr8	8011782	8017011	8014396	ENSG00000233115.4	-	unprocessed_pseudogene	KNOWN	FAM90A11P	1	5	-0.184526
chr8	8019429	8024652	8022040	ENSG00000215354.9	-	transcribed_unprocessed_pseudogene	KNOWN	FAM90A24P	2	6	-0.184526
chr8	8027077	8032305	8029691	ENSG00000254229.2	-	unprocessed_pseudogene	KNOWN	FAM90A12P	1	6	0.165153
chr8	8039978	8040953	8040465	ENSG00000227013.3	+	unprocessed_pseudogene	KNOWN	OR7E96P	1	1	0.608242
chr8	8048919	8049267	8049093	ENSG00000253881.1	+	processed_pseudogene	KNOWN	RP11-52B19.8	1	1	0.608242
chr8	8086022	8086765	8086393	ENSG00000255459.1	-	processed_pseudogene	KNOWN	RP11-52B19.10	1	1	0.201063
chr8	8088941	8089089	8089015	ENSG00000221305.1	-	miRNA	KNOWN	MIR548I3	1	1	0.201063
chr8	8095946	8096726	8096336	ENSG00000244427.1	+	processed_pseudogene	KNOWN	RP11-52B19.1	1	1	0.063137
chr8	8116745	8116949	8116847	ENSG00000254311.1	-	processed_pseudogene	KNOWN	SNRPCP17	1	1	0.067744
chr8	8154308	8216916	8185612	ENSG00000249188.1	+	unprocessed_pseudogene	KNOWN	ENPP7P1	1	3	0.123749
chr8	8167819	8226614	8197216	ENSG00000253893.2	-	antisense	KNOWN	FAM85B	1	5	0.169218
chr8	8188535	8189195	8188865	ENSG00000268955.2	-	lincRNA	KNOWN	RP11-556O5.6	1	1	0.252149
chr8	8228595	8244865	8236730	ENSG00000173295.7	+	transcribed_unprocessed_pseudogene	KNOWN	FAM86B3P	8	9	0.557080
chr8	8236003	8244667	8240335	ENSG00000253981.5	-	transcribed_unprocessed_pseudogene	KNOWN	ALG1L13P	4	7	0.591918
chr8	8317736	8386498	8352117	ENSG00000275342.4	-	protein_coding	KNOWN	SGK223	2	6	0.260489
chr8	8414690	8424632	8419661	ENSG00000253505.1	-	lincRNA	KNOWN	CTA-398F10.1	2	2	0.045769
chr8	8456909	8461337	8459123	ENSG00000254153.1	-	lincRNA	KNOWN	CTA-398F10.2	1	3	0.357516
chr8	8555738	8560965	8558351	ENSG00000253343.1	-	lincRNA	KNOWN	CTD-3023L14.3	1	2	0.157746
chr8	8559894	8562124	8561009	ENSG00000253774.1	+	lincRNA	KNOWN	CTD-3023L14.1	1	3	0.157746
chr8	8561391	8569688	8565539	ENSG00000253130.1	+	lincRNA	KNOWN	CTD-3023L14.2	2	2	0.157746
chr8	8582352	8582427	8582389	ENSG00000281480.1	-	miRNA	NOVEL	AC114550.1	1	1	0.440555
chr8	8582352	8582655	8582503	ENSG00000263616.2	-	misc_RNA	KNOWN	RN7SL178P	1	1	0.440555
chr8	8633464	8633548	8633506	ENSG00000264445.1	+	miRNA	NOVEL	AC087269.1	1	1	0.107340
chr8	8701938	8704106	8703022	ENSG00000253958.1	+	protein_coding	KNOWN	CLDN23	1	1	0.077565
chr8	8723693	8782479	8753086	ENSG00000254367.5	-	lincRNA	KNOWN	RP11-211C9.1	2	4	0.063699
chr8	8783354	8893645	8838499	ENSG00000147324.10	-	protein_coding	KNOWN	MFHAS1	4	4	0.216911
chr8	8895813	8895918	8895865	ENSG00000200713.1	+	snRNA	KNOWN	RNU6-682P	1	1	0.515203
chr8	8933721	8934006	8933863	ENSG00000270966.1	-	processed_pseudogene	KNOWN	RP11-62H7.3	1	1	0.044943
chr8	8961200	8979025	8970112	ENSG00000233609.3	+	transcribed_processed_pseudogene	KNOWN	RP11-62H7.2	3	3	0.208194
chr8	8961575	8961708	8961641	ENSG00000207244.1	+	snoRNA	NOVEL	SNORA70	1	1	0.091992
chr8	9002147	9116746	9059446	ENSG00000104626.14	+	protein_coding	KNOWN	ERI1	9	8	0.151764
chr8	9048445	9048518	9048481	ENSG00000263407.1	+	miRNA	KNOWN	MIR4660	1	1	0.005577
chr8	9072455	9072516	9072485	ENSG00000239078.1	-	snRNA	KNOWN	RNU7-55P	1	1	0.309299
chr8	9091240	9091508	9091374	ENSG00000197334.2	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.352519
chr8	9136255	9151574	9143914	ENSG00000173281.4	-	protein_coding	KNOWN	PPP1R3B	2	2	0.207846
chr8	9141424	9145435	9143429	ENSG00000254340.1	+	antisense	KNOWN	RP11-10A14.3	2	3	0.203885
chr8	9151742	9168136	9159939	ENSG00000253426.5	+	lincRNA	KNOWN	RP11-10A14.4	3	4	0.242409
chr8	9158063	9158621	9158342	ENSG00000279949.1	+	lincRNA	KNOWN	RP11-10A14.9	1	1	0.242409
chr8	9180251	9182519	9181385	ENSG00000253252.2	-	lincRNA	KNOWN	RP11-10A14.6	1	2	0.006416
chr8	9189011	9202854	9195932	ENSG00000248538.6	+	lincRNA	KNOWN	RP11-10A14.5	3	4	-0.102061
chr8	9233013	9233449	9233231	ENSG00000254091.2	+	processed_pseudogene	KNOWN	RP11-10A14.8	1	1	-0.231898
chr8	9249417	9413714	9331565	ENSG00000254235.5	+	lincRNA	KNOWN	RP11-115J16.1	5	4	-0.139005
chr8	9255349	9260295	9257822	ENSG00000253887.1	-	lincRNA	KNOWN	RP11-10A14.7	1	2	-0.366635
chr8	9287472	9287578	9287525	ENSG00000207415.1	-	snRNA	KNOWN	RNU6-1151P	1	1	-0.110693
chr8	9351238	9358441	9354839	ENSG00000253735.1	-	lincRNA	KNOWN	RP11-115J16.3	1	3	-0.169548
chr8	9371090	9371195	9371142	ENSG00000201815.1	-	snRNA	KNOWN	RNU6-526P	1	1	-0.271647
chr8	9371970	9436205	9404087	ENSG00000254237.5	-	lincRNA	KNOWN	RP11-115J16.2	3	4	-0.164276
chr8	9453698	9457418	9455558	ENSG00000249050.1	+	processed_pseudogene	KNOWN	RP11-375N15.1	1	4	-0.250012
chr8	9555144	9556520	9555832	ENSG00000272267.2	-	antisense	KNOWN	RP11-375N15.2	1	1	0.002908
chr8	9555914	9782346	9669130	ENSG00000173273.15	+	protein_coding	KNOWN	TNKS	13	27	-0.135020
chr8	9658295	9658438	9658366	ENSG00000253697.1	-	unprocessed_pseudogene	KNOWN	RP11-1081K18.1	1	1	-0.040982
chr8	9741672	9741768	9741720	ENSG00000207701.1	+	miRNA	KNOWN	MIR597	1	1	-0.031880
chr8	9900064	9905366	9902715	ENSG00000253230.6	-	lincRNA	KNOWN	LINC00599	5	4	0.246438
chr8	9903388	9903472	9903430	ENSG00000275677.1	-	miRNA	KNOWN	MIR124-1	1	1	0.246438
chr8	10050485	10054254	10052369	ENSG00000260093.1	-	antisense	KNOWN	RP11-1E4.1	1	1	0.038553
chr8	10054268	10428891	10241579	ENSG00000175806.14	+	protein_coding	KNOWN	MSRA	10	7	-0.017505
chr8	10087921	10088031	10087976	ENSG00000221320.1	+	miRNA	NOVEL	AC023385.1	1	1	-0.073293
chr8	10336782	10337677	10337229	ENSG00000249848.1	-	processed_pseudogene	KNOWN	RP11-212F11.1	1	2	-0.028638
chr8	10433672	10438312	10435992	ENSG00000261451.1	+	sense_overlapping	KNOWN	RP11-981G7.1	1	1	0.076479
chr8	10474565	10481974	10478269	ENSG00000253641.5	+	lincRNA	KNOWN	LINCR-0001	3	5	-0.470603
chr8	10476223	10476329	10476276	ENSG00000207128.1	+	snRNA	KNOWN	RNU6-729P	1	1	-0.470603
chr8	10477491	10479375	10478433	ENSG00000253678.1	-	lincRNA	KNOWN	RP11-981G7.3	1	2	-0.470603
chr8	10482878	10547585	10515231	ENSG00000253649.2	-	antisense	KNOWN	PRSS51	2	5	-0.194724
chr8	10486807	10489666	10488236	ENSG00000272505.1	+	lincRNA	KNOWN	RP11-981G7.6	1	1	-0.470603
chr8	10525546	10554166	10539856	ENSG00000184647.10	+	protein_coding	KNOWN	PRSS55	3	5	-0.078428
chr8	10606349	10712187	10659268	ENSG00000183638.5	-	protein_coding	KNOWN	RP1L1	2	4	0.248911
chr8	10666978	10667070	10667024	ENSG00000263762.1	+	miRNA	KNOWN	MIR4286	1	1	0.229495
chr8	10672637	10700593	10686615	ENSG00000171060.10	+	protein_coding	KNOWN	C8orf74	7	5	0.240916
chr8	10686569	10686687	10686628	ENSG00000212433.1	+	rRNA	KNOWN	RNA5SP252	1	1	0.052463
chr8	10723768	10730512	10727140	ENSG00000171056.7	-	protein_coding	KNOWN	SOX7	1	2	0.353309
chr8	10725399	10839847	10782623	ENSG00000258724.1	-	protein_coding	KNOWN	CTD-2135J3.4	1	6	0.105369
chr8	10729314	10771392	10750353	ENSG00000248896.2	+	antisense	KNOWN	CTD-2135J3.3	2	3	0.069154
chr8	10764963	10839884	10802423	ENSG00000254093.8	-	protein_coding	KNOWN	PINX1	8	7	0.110528
chr8	10840576	10846501	10843538	ENSG00000253695.1	+	antisense	KNOWN	RP11-177H2.2	1	3	-0.028302
chr8	10856085	10859436	10857760	ENSG00000280294.1	-	TEC	KNOWN	RP11-177H2.1	1	1	-0.215063
chr8	10896045	11201366	11048705	ENSG00000171044.10	-	protein_coding	KNOWN	XKR6	4	3	0.112311
chr8	11035201	11035312	11035256	ENSG00000207600.2	-	miRNA	KNOWN	MIR598	1	1	0.222886
chr8	11062647	11067089	11064868	ENSG00000254839.1	-	lincRNA	KNOWN	AF131215.6	1	2	0.253743
chr8	11104691	11106704	11105697	ENSG00000269918.1	-	sense_intronic	KNOWN	AF131215.9	1	1	0.114712
chr8	11107788	11109726	11108757	ENSG00000255310.2	-	sense_intronic	KNOWN	AF131215.2	1	1	0.114712
chr8	11123381	11126064	11124722	ENSG00000254936.4	-	sense_intronic	KNOWN	AF131215.3	1	2	-0.077933
chr8	11136898	11138607	11137752	ENSG00000254556.1	-	sense_intronic	KNOWN	AF131215.4	1	1	0.212673
chr8	11175051	11175570	11175310	ENSG00000231965.4	+	processed_pseudogene	KNOWN	AF131215.1	1	1	0.020831
chr8	11202965	11203671	11203318	ENSG00000270076.1	+	lincRNA	KNOWN	AF131215.8	1	1	-0.084165
chr8	11247626	11267865	11257745	ENSG00000236827.1	-	lincRNA	KNOWN	LINC00529	1	2	0.051923
chr8	11256020	11256602	11256311	ENSG00000239315.4	+	processed_pseudogene	KNOWN	RPL19P13	1	1	0.068276
chr8	11281364	11282501	11281932	ENSG00000249316.2	-	unprocessed_pseudogene	KNOWN	CTC-493P15.2	1	2	0.020042
chr8	11283500	11285068	11284284	ENSG00000280273.1	-	protein_coding	KNOWN	AF131216.1	1	1	0.020042
chr8	11284416	11328146	11306281	ENSG00000104643.9	+	protein_coding	KNOWN	MTMR9	4	11	-0.051909
chr8	11315859	11325429	11320644	ENSG00000246477.3	-	antisense	KNOWN	AF131216.6	1	2	-0.005107
chr8	11330888	11332208	11331548	ENSG00000177710.5	+	protein_coding	KNOWN	SLC35G5	1	1	0.197602
chr8	11339637	11368452	11354044	ENSG00000154316.14	+	unitary_pseudogene	KNOWN	TDH	4	9	-0.051553
chr8	11345748	11347502	11346625	ENSG00000255020.1	-	antisense	KNOWN	AF131216.5	1	2	0.197602
chr8	11368402	11438658	11403530	ENSG00000184608.8	+	processed_transcript	KNOWN	FAM167A-AS1	3	7	0.111401
chr8	11379395	11379675	11379535	ENSG00000242483.3	+	misc_RNA	KNOWN	RN7SL293P	1	1	-0.061814
chr8	11392411	11392517	11392464	ENSG00000199368.1	-	snRNA	KNOWN	RNU6-1084P	1	1	0.109065
chr8	11421463	11474715	11448089	ENSG00000154319.14	-	protein_coding	KNOWN	FAM167A	7	4	0.405653
chr8	11494001	11564604	11529302	ENSG00000136573.12	+	protein_coding	KNOWN	BLK	6	13	0.420563
chr8	11552488	11552991	11552739	ENSG00000269954.1	-	lincRNA	KNOWN	RP11-148O21.6	1	1	0.490254
chr8	11553224	11554207	11553715	ENSG00000254774.1	-	antisense	KNOWN	RP11-148O21.3	1	2	0.490254
chr8	11556251	11558022	11557136	ENSG00000255518.1	-	antisense	KNOWN	RP11-148O21.4	1	2	0.490254
chr8	11558466	11560020	11559243	ENSG00000255354.1	-	antisense	KNOWN	RP11-148O21.2	1	3	0.490254
chr8	11576313	11581342	11578827	ENSG00000170983.3	+	lincRNA	KNOWN	LINC00208	1	3	0.428683
chr8	11676959	11760002	11718480	ENSG00000136574.17	+	protein_coding	KNOWN	GATA4	9	9	0.117254
chr8	11761256	11763223	11762239	ENSG00000255394.4	+	lincRNA	KNOWN	C8orf49	2	1	0.322162
chr8	11769639	11787346	11778492	ENSG00000154328.15	+	protein_coding	KNOWN	NEIL2	7	6	0.354358
chr8	11790005	11790386	11790195	ENSG00000227203.3	+	processed_pseudogene	KNOWN	SUB1P1	1	1	0.422965
chr8	11795573	11839309	11817441	ENSG00000079459.12	+	protein_coding	KNOWN	FDFT1	26	10	0.358539
chr8	11797928	11802568	11800248	ENSG00000255046.1	-	lincRNA	KNOWN	RP11-297N6.4	2	2	0.422965
chr8	11842524	11869448	11855986	ENSG00000164733.20	-	protein_coding	KNOWN	CTSB	33	12	0.714824
chr8	11846154	11846391	11846272	ENSG00000269899.1	-	sense_intronic	KNOWN	RP11-589N15.2	1	1	0.248496
chr8	11895850	11896870	11896360	ENSG00000255144.1	-	unprocessed_pseudogene	KNOWN	RP11-589N15.1	1	2	0.753995
chr8	11919900	11920809	11920354	ENSG00000254948.1	-	unprocessed_pseudogene	KNOWN	OR7E158P	1	1	0.382211
chr8	11928597	11929563	11929080	ENSG00000206014.6	-	unprocessed_pseudogene	KNOWN	OR7E161P	1	1	0.382211
chr8	11973937	11974599	11974268	ENSG00000205884.2	-	protein_coding	KNOWN	DEFB136	1	2	0.246966
chr8	11982321	11984590	11983455	ENSG00000205883.2	+	protein_coding	KNOWN	DEFB135	1	2	0.246966
chr8	11993174	11996312	11994743	ENSG00000205882.8	-	protein_coding	KNOWN	DEFB134	2	2	-0.282935
chr8	11999087	11999468	11999277	ENSG00000255174.1	+	processed_pseudogene	KNOWN	RP11-481A20.4	1	1	-0.282935
chr8	12003400	12004082	12003741	ENSG00000254507.2	-	transcribed_processed_pseudogene	KNOWN	RP11-481A20.10	2	1	-0.282935
chr8	12025244	12025598	12025421	ENSG00000255016.1	-	processed_pseudogene	KNOWN	RP11-481A20.8	1	1	0.055280
chr8	12033646	12034612	12034129	ENSG00000254817.1	-	unprocessed_pseudogene	KNOWN	OR7E160P	1	1	0.291025
chr8	12043506	12043670	12043588	ENSG00000254700.1	-	processed_pseudogene	KNOWN	RP11-1236K1.11	1	1	0.291025
chr8	12064389	12071747	12068068	ENSG00000233050.1	-	protein_coding	KNOWN	RP11-1236K1.1	1	2	-0.148247
chr8	12087396	12087445	12087420	ENSG00000252029.1	-	rRNA	KNOWN	RNA5SP253	1	1	-0.315666
chr8	12095176	12099536	12097356	ENSG00000255544.2	-	unprocessed_pseudogene	KNOWN	DEFB108P3	1	2	-0.084165
chr8	12104389	12115516	12109952	ENSG00000215343.7	+	protein_coding	KNOWN	ZNF705D	2	6	-0.076880
chr8	12115782	12177550	12146666	ENSG00000255052.4	+	antisense	KNOWN	FAM66D	1	4	-0.244586
chr8	12128107	12129298	12128702	ENSG00000254923.1	-	processed_pseudogene	KNOWN	RP11-1236K1.8	1	1	-0.069472
chr8	12132417	12134444	12133430	ENSG00000226430.5	-	protein_coding	KNOWN	USP17L7	1	1	-0.002645
chr8	12137168	12139077	12138122	ENSG00000223443.2	-	protein_coding	KNOWN	USP17L2	1	1	-0.002645
chr8	12150895	12151134	12151014	ENSG00000254866.2	-	processed_pseudogene	KNOWN	DEFB109P3	1	1	-0.738083
chr8	12172202	12178575	12175388	ENSG00000205879.4	-	unprocessed_pseudogene	KNOWN	FAM90A2P	1	6	0.091992
chr8	12178697	12182719	12180708	ENSG00000249889.1	+	unprocessed_pseudogene	KNOWN	ALG1L11P	1	4	0.091992
chr8	12180689	12180754	12180721	ENSG00000266637.1	+	miRNA	NOVEL	AC145124.1	1	1	0.091992
chr8	12182096	12194133	12188114	ENSG00000186523.14	-	protein_coding	KNOWN	FAM86B1	19	8	0.290898
chr8	12194467	12196280	12195373	ENSG00000255495.1	+	antisense	KNOWN	AC145124.2	1	2	0.671149
chr8	12205759	12206389	12206074	ENSG00000254527.1	-	processed_pseudogene	KNOWN	ENPP7P12	1	1	0.671149
chr8	12290071	12296180	12293125	ENSG00000237215.3	-	unprocessed_pseudogene	KNOWN	ABC12-47043100G14.2	1	2	-0.723584
chr8	12310962	12318316	12314639	ENSG00000232948.1	-	protein_coding	KNOWN	DEFB130	1	2	-0.342411
chr8	12333644	12333693	12333668	ENSG00000252535.1	-	rRNA	KNOWN	RNA5SP254	1	1	-0.552528
chr8	12341426	12345776	12343601	ENSG00000254623.1	-	unprocessed_pseudogene	KNOWN	DEFB108P4	1	2	-0.552528
chr8	12356136	12359391	12357763	ENSG00000215339.3	+	unprocessed_pseudogene	KNOWN	ZNF705CP	1	4	0.091992
chr8	12362019	12388296	12375157	ENSG00000227888.4	+	lincRNA	KNOWN	FAM66A	2	6	0.134746
chr8	12374366	12375546	12374956	ENSG00000254423.1	-	processed_pseudogene	KNOWN	RP11-351I21.7	1	1	0.153392
chr8	12378679	12380265	12379472	ENSG00000255556.2	-	processed_pseudogene	KNOWN	RP11-351I21.6	1	1	0.153392
chr8	12393209	12400366	12396787	ENSG00000242296.2	-	unprocessed_pseudogene	KNOWN	DEFB109P1	1	2	-0.213300
chr8	12412827	12414373	12413600	ENSG00000270074.1	+	lincRNA	KNOWN	RP11-351I21.11	1	1	0.003636
chr8	12415080	12418090	12416585	ENSG00000251402.3	-	unprocessed_pseudogene	KNOWN	FAM90A25P	1	4	0.003636
chr8	12421032	12425000	12423016	ENSG00000250794.2	+	unprocessed_pseudogene	KNOWN	ALG1L12P	1	4	0.003636
chr8	12425614	12436343	12430978	ENSG00000145002.12	-	protein_coding	KNOWN	FAM86B2	4	8	0.302613
chr8	12448013	12511278	12479645	ENSG00000255549.2	-	unprocessed_pseudogene	KNOWN	ENPP7P6	1	3	0.121796
chr8	12476462	12477122	12476792	ENSG00000270154.1	+	lincRNA	KNOWN	RP11-419I17.1	1	1	0.050413
chr8	12570350	12571130	12570740	ENSG00000242607.1	-	processed_pseudogene	KNOWN	RPS3AP34	1	1	-0.004492
chr8	12578005	12578152	12578078	ENSG00000238460.1	+	miRNA	NOVEL	AC068587.2	1	1	-0.004492
chr8	12580287	12581063	12580675	ENSG00000255122.1	+	processed_pseudogene	KNOWN	RP11-303G3.6	1	2	-0.004492
chr8	12628476	12629256	12628866	ENSG00000244289.1	-	processed_pseudogene	KNOWN	RPS3AP35	1	1	0.340379
chr8	12636104	12636252	12636178	ENSG00000238323.1	+	miRNA	NOVEL	AC068587.1	1	1	-0.097486
chr8	12638428	12638602	12638515	ENSG00000255253.1	+	processed_pseudogene	KNOWN	RP11-303G3.9	1	1	-0.097486
chr8	12676035	12676389	12676212	ENSG00000254581.1	-	processed_pseudogene	KNOWN	RP11-303G3.10	1	1	0.134427
chr8	12684154	12685153	12684653	ENSG00000177400.6	-	unprocessed_pseudogene	KNOWN	OR7E8P	1	1	0.134427
chr8	12696307	12697273	12696790	ENSG00000254917.1	-	unprocessed_pseudogene	KNOWN	OR7E15P	1	1	0.070618
chr8	12703066	12704056	12703561	ENSG00000254724.1	-	unprocessed_pseudogene	KNOWN	OR7E10P	1	1	0.070618
chr8	12719127	12719195	12719161	ENSG00000264512.1	+	miRNA	KNOWN	MIR5692A2	1	1	0.149873
chr8	12721894	12756073	12738983	ENSG00000154359.12	-	protein_coding	KNOWN	LONRF1	9	12	-0.048096
chr8	12727232	12727304	12727268	ENSG00000266206.1	-	miRNA	KNOWN	MIR3926-2	1	1	0.149873
chr8	12765849	12811478	12788663	ENSG00000254813.5	-	lincRNA	KNOWN	RP11-252C15.1	2	5	-0.123671
chr8	12794243	12818291	12806267	ENSG00000255494.1	+	lincRNA	KNOWN	LINC00681	1	2	-0.315233
chr8	12905838	12905921	12905879	ENSG00000264463.1	+	miRNA	NOVEL	AC090133.1	1	1	-0.303937
chr8	12945642	13031503	12988572	ENSG00000250305.8	+	protein_coding	KNOWN	KIAA1456	9	6	0.048489
chr8	12958387	12962200	12960293	ENSG00000251468.2	+	unprocessed_pseudogene	KNOWN	RP11-369K16.1	1	3	-0.100653
chr8	13044350	13044456	13044403	ENSG00000206996.1	+	snRNA	KNOWN	RNU6-842P	1	1	-0.044745
chr8	13083361	13604610	13343985	ENSG00000164741.14	-	protein_coding	KNOWN	DLC1	18	18	0.055329
chr8	13160178	13160279	13160228	ENSG00000200630.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.017831
chr8	13338574	13342754	13340664	ENSG00000253932.1	+	antisense	KNOWN	RP11-10C8.2	1	2	-0.243429
chr8	13353401	13353530	13353465	ENSG00000253257.1	-	processed_pseudogene	KNOWN	MTND4P7	1	1	0.099605
chr8	13536029	13536135	13536082	ENSG00000252179.1	+	rRNA	KNOWN	RNA5SP255	1	1	0.004529
chr8	13566843	13568287	13567565	ENSG00000164743.4	+	protein_coding	KNOWN	C8orf48	1	1	-0.376778
chr8	13583889	13584533	13584211	ENSG00000254491.1	-	processed_pseudogene	KNOWN	RP11-145O15.2	1	1	-0.014923
chr8	13695574	13705506	13700540	ENSG00000255457.1	+	processed_pseudogene	KNOWN	RP11-436P7.1	1	2	-0.584469
chr8	13741809	13742781	13742295	ENSG00000255413.1	+	processed_pseudogene	KNOWN	RP11-436P7.2	1	1	-0.599886
chr8	13844101	13849109	13846605	ENSG00000254753.1	-	lincRNA	KNOWN	RP11-480O10.1	1	2	-0.573272
chr8	13909231	13909780	13909505	ENSG00000254425.1	-	processed_pseudogene	KNOWN	RP11-480O10.2	1	1	-0.438523
chr8	14022687	14023422	14023054	ENSG00000255437.1	-	processed_pseudogene	KNOWN	RP11-510I21.1	1	1	-0.519938
chr8	14089864	15238339	14664101	ENSG00000185053.12	-	protein_coding	KNOWN	SGCZ	3	8	-0.598575
chr8	14161297	14165359	14163328	ENSG00000254575.1	+	antisense	KNOWN	RP11-3G21.1	1	3	-0.410509
chr8	14309033	14309672	14309352	ENSG00000214366.4	+	processed_pseudogene	KNOWN	EIF4EP5	1	1	-0.532969
chr8	14319455	14319516	14319485	ENSG00000252264.1	+	snRNA	KNOWN	RNU7-153P	1	1	-0.631947
chr8	14332555	14332663	14332609	ENSG00000206950.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.661093
chr8	14487776	14487879	14487827	ENSG00000252035.1	-	snRNA	KNOWN	RNU6-397P	1	1	-0.833046
chr8	14514741	14514865	14514803	ENSG00000263415.1	+	miRNA	NOVEL	AC021760.1	1	1	-0.875218
chr8	14690382	14690619	14690500	ENSG00000255365.1	+	processed_pseudogene	KNOWN	RP11-776K3.1	1	1	-0.499045
chr8	14853438	14853510	14853474	ENSG00000199127.1	-	miRNA	KNOWN	MIR383	1	1	-0.826478
chr8	14879057	14879819	14879438	ENSG00000255076.2	-	sense_intronic	KNOWN	CTD-2023J5.1	1	2	-0.618502
chr8	15325296	15325569	15325432	ENSG00000249368.1	+	processed_pseudogene	KNOWN	RP11-782K4.1	1	1	-0.697241
chr8	15417215	15766649	15591932	ENSG00000104723.20	+	protein_coding	KNOWN	TUSC3	13	11	-0.323415
chr8	15521884	15521966	15521925	ENSG00000223214.1	+	miRNA	NOVEL	AC091559.1	1	1	-0.395057
chr8	15688914	15689562	15689238	ENSG00000248423.1	-	processed_pseudogene	KNOWN	RP11-235P11.1	1	1	-0.657601
chr8	15806149	15807283	15806716	ENSG00000250483.1	-	processed_pseudogene	KNOWN	PPM1AP1	1	1	-0.164573
chr8	15943127	15943532	15943329	ENSG00000226836.5	+	processed_pseudogene	KNOWN	RP11-77B22.1	1	1	-0.251082
chr8	15973315	16000324	15986819	ENSG00000253648.1	+	lincRNA	KNOWN	RP11-77B22.2	1	3	-0.264453
chr8	16107878	16567490	16337684	ENSG00000038945.14	-	protein_coding	KNOWN	MSR1	14	10	-0.380645
chr8	16275681	16276296	16275988	ENSG00000253951.1	+	processed_pseudogene	KNOWN	RP11-447G11.1	1	1	-0.615226
chr8	16374618	16375082	16374850	ENSG00000253934.2	+	processed_pseudogene	KNOWN	MRPL49P2	1	1	-0.496813
chr8	16604255	16664879	16634567	ENSG00000253184.1	+	lincRNA	KNOWN	RP11-13N12.2	1	3	-0.320309
chr8	16676905	16915044	16795974	ENSG00000253496.2	-	lincRNA	KNOWN	RP11-13N12.1	2	4	-0.264183
chr8	16863196	16863496	16863346	ENSG00000264092.2	-	misc_RNA	KNOWN	RN7SL474P	1	1	-0.390285
chr8	16992169	17002181	16997175	ENSG00000078579.8	-	protein_coding	KNOWN	FGF20	2	3	-0.350718
chr8	17027238	17122644	17074941	ENSG00000155970.11	+	protein_coding	KNOWN	MICU3	6	15	0.002793
chr8	17131181	17149789	17140485	ENSG00000249258.2	+	lincRNA	KNOWN	RP11-468H14.2	1	3	-0.080475
chr8	17150301	17150888	17150594	ENSG00000244113.1	-	processed_pseudogene	KNOWN	RP11-468H14.1	1	1	0.237291
chr8	17156029	17224799	17190414	ENSG00000104219.12	+	protein_coding	KNOWN	ZDHHC2	4	13	-0.005662
chr8	17224964	17246878	17235921	ENSG00000198791.11	-	protein_coding	KNOWN	CNOT7	13	7	-0.247250
chr8	17246571	17302427	17274499	ENSG00000155975.9	+	protein_coding	KNOWN	VPS37A	11	12	-0.004000
chr8	17298030	17413528	17355779	ENSG00000003987.13	-	protein_coding	KNOWN	MTMR7	9	14	-0.211397
chr8	17303945	17304035	17303990	ENSG00000264599.2	+	miRNA	NOVEL	AC124074.1	1	1	-0.266462
chr8	17469518	17471618	17470568	ENSG00000214607.2	+	unitary_pseudogene	KNOWN	ADAM24P	1	1	-0.441555
chr8	17497088	17570573	17533830	ENSG00000003989.16	+	protein_coding	KNOWN	SLC7A2	5	14	-0.119792
chr8	17498647	17499238	17498942	ENSG00000279271.1	-	TEC	KNOWN	RP11-349F21.3	1	1	-0.115813
chr8	17498737	17499157	17498947	ENSG00000280453.1	+	TEC	KNOWN	RP11-349F21.4	1	1	-0.115813
chr8	17500012	17500605	17500308	ENSG00000279903.1	+	TEC	KNOWN	RP11-349F21.5	1	1	-0.115813
chr8	17510613	17511300	17510956	ENSG00000279932.1	+	sense_intronic	KNOWN	RP11-349F21.2	1	1	-0.079961
chr8	17576433	17644071	17610252	ENSG00000104213.12	+	protein_coding	KNOWN	PDGFRL	3	7	0.016988
chr8	17596312	17596378	17596345	ENSG00000277466.1	-	unprocessed_pseudogene	KNOWN	RP11-349F21.1	1	1	-0.061631
chr8	17643795	17800917	17722356	ENSG00000129422.14	-	protein_coding	KNOWN	MTUS1	29	15	-0.152126
chr8	17681578	17681657	17681617	ENSG00000265520.1	-	miRNA	KNOWN	MIR548V	1	1	0.398238
chr8	17703988	17706187	17705087	ENSG00000253168.1	+	antisense	KNOWN	RP11-326L2.1	1	2	-0.382788
chr8	17748118	17748230	17748174	ENSG00000212280.1	+	rRNA	KNOWN	RNA5SP256	1	1	-0.141068
chr8	17801345	17861069	17831207	ENSG00000253944.1	+	antisense	KNOWN	RP11-156K13.1	1	2	-0.267743
chr8	17808941	17820868	17814904	ENSG00000253671.1	+	processed_transcript	KNOWN	RP11-806O11.1	2	3	-0.278705
chr8	17864380	17910365	17887372	ENSG00000104760.16	-	protein_coding	KNOWN	FGL1	11	10	-0.407359
chr8	17882043	17882661	17882352	ENSG00000253215.1	+	antisense	KNOWN	RP11-156K13.2	1	2	-0.387176
chr8	17905756	17907887	17906821	ENSG00000254054.2	+	lincRNA	KNOWN	RP11-156K13.3	1	3	-0.474778
chr8	17922840	18029944	17976392	ENSG00000078674.17	+	protein_coding	KNOWN	PCM1	23	39	-0.173830
chr8	18056425	18084985	18070705	ENSG00000104763.17	-	protein_coding	KNOWN	ASAH1	13	14	-0.002690
chr8	18084868	18096394	18090631	ENSG00000245281.6	+	antisense	KNOWN	CTD-2547L16.1	5	5	0.036100
chr8	18088569	18089687	18089128	ENSG00000253384.1	-	processed_pseudogene	KNOWN	CTD-2547L16.3	1	1	0.134056
chr8	18170477	18223689	18197083	ENSG00000171428.13	+	protein_coding	KNOWN	NAT1	10	5	-0.264113
chr8	18200924	18201205	18201064	ENSG00000254015.1	-	processed_pseudogene	KNOWN	MTND4LP26	1	1	-0.252273
chr8	18370607	18371484	18371045	ENSG00000253937.1	+	unprocessed_pseudogene	KNOWN	NATP	1	1	-0.163005
chr8	18383274	18383917	18383595	ENSG00000244593.1	-	processed_pseudogene	KNOWN	RP11-685B14.1	1	1	-0.163005
chr8	18387108	18387777	18387442	ENSG00000271654.1	-	processed_pseudogene	KNOWN	RP11-685B14.3	1	1	-0.163005
chr8	18391245	18401218	18396231	ENSG00000156006.4	+	protein_coding	KNOWN	NAT2	2	2	-0.133075
chr8	18527301	19084730	18806015	ENSG00000156011.16	-	protein_coding	KNOWN	PSD3	20	16	-0.006860
chr8	18582843	18582943	18582893	ENSG00000274368.1	-	miRNA	NOVEL	AC100800.2	1	1	0.029450
chr8	18664693	18664764	18664728	ENSG00000238787.2	-	miRNA	NOVEL	AC100800.1	1	1	-0.150710
chr8	18720905	18734405	18727655	ENSG00000187229.3	+	antisense	KNOWN	RP11-161I2.1	1	3	-0.079236
chr8	18774547	18774918	18774732	ENSG00000244018.1	-	processed_pseudogene	KNOWN	RPL35P6	1	1	-0.035926
chr8	18809500	18809626	18809563	ENSG00000251963.1	-	miRNA	NOVEL	AC090420.1	1	1	-0.096081
chr8	18864681	18865247	18864964	ENSG00000278886.1	-	TEC	KNOWN	RP11-108A14.1	1	1	0.025802
chr8	18979619	18979772	18979695	ENSG00000201157.1	+	snoRNA	NOVEL	SNORA62	1	1	0.595654
chr8	18989279	19000952	18995115	ENSG00000253335.1	+	antisense	KNOWN	RP11-420B22.1	1	3	-0.332427
chr8	19001627	19001950	19001788	ENSG00000270255.1	+	processed_pseudogene	KNOWN	RP11-420B22.2	1	1	-0.393435
chr8	19084992	19259469	19172230	ENSG00000253557.5	-	lincRNA	KNOWN	RP11-1080G15.1	3	5	0.128113
chr8	19091733	19115024	19103378	ENSG00000254242.1	+	lincRNA	KNOWN	RP11-1080G15.2	1	3	0.221759
chr8	19237737	19241912	19239824	ENSG00000250316.1	+	unprocessed_pseudogene	KNOWN	RP11-618M23.1	1	5	0.075597
chr8	19246350	19249240	19247795	ENSG00000254201.1	+	lincRNA	KNOWN	RP11-618M23.2	1	2	0.075597
chr8	19254241	19257334	19255787	ENSG00000253280.1	-	lincRNA	KNOWN	RP11-618M23.4	1	4	0.427278
chr8	19277284	19277573	19277428	ENSG00000279919.1	+	TEC	KNOWN	RP11-618M23.3	1	1	0.250057
chr8	19313617	19396218	19354917	ENSG00000104611.11	+	protein_coding	KNOWN	SH2D4A	6	10	0.373630
chr8	19375128	19375622	19375375	ENSG00000279858.1	-	TEC	KNOWN	RP11-618M23.5	1	1	0.323317
chr8	19404161	19758029	19581095	ENSG00000147408.14	-	protein_coding	KNOWN	CSGALNACT1	16	10	0.038356
chr8	19678572	19688934	19683753	ENSG00000253270.1	+	lincRNA	KNOWN	RP11-1105O14.1	1	2	-0.047866
chr8	19817140	19852083	19834611	ENSG00000104613.11	+	protein_coding	KNOWN	INTS10	19	17	0.093193
chr8	19901717	19967258	19934487	ENSG00000175445.14	+	protein_coding	KNOWN	LPL	7	10	-0.073112
chr8	20079305	20118442	20098873	ENSG00000253775.1	+	antisense	KNOWN	AC100802.3	1	2	-0.145401
chr8	20113343	20113672	20113507	ENSG00000242709.1	-	processed_pseudogene	KNOWN	RPL30P9	1	1	0.037544
chr8	20144855	20183206	20164030	ENSG00000036565.14	-	protein_coding	KNOWN	SLC18A1	10	17	0.003919
chr8	20197367	20226819	20212093	ENSG00000147416.10	+	protein_coding	KNOWN	ATP6V1B2	6	14	-0.074672
chr8	20229779	20229877	20229828	ENSG00000222267.1	+	snRNA	KNOWN	RNU6-892P	1	1	-0.126354
chr8	20246165	20303963	20275064	ENSG00000061337.15	-	protein_coding	KNOWN	LZTS1	4	4	0.410971
chr8	20275773	20290458	20283115	ENSG00000253733.3	+	lincRNA	KNOWN	LZTS1-AS1	1	3	0.522398
chr8	20290174	20290289	20290231	ENSG00000274467.1	+	rRNA	KNOWN	RNA5SP257	1	1	0.408019
chr8	20350210	20372769	20361489	ENSG00000253164.5	+	lincRNA	KNOWN	RP11-563N12.2	2	5	0.200883
chr8	20551201	20551405	20551303	ENSG00000253178.1	+	unprocessed_pseudogene	KNOWN	RP11-404E12.1	1	1	-0.305664
chr8	20655691	20700134	20677912	ENSG00000253300.1	-	lincRNA	KNOWN	RP11-108E14.1	2	2	-0.349123
chr8	20934435	20934837	20934636	ENSG00000253866.1	-	processed_pseudogene	KNOWN	TMEM97P2	1	1	-0.262060
chr8	20941428	20950175	20945801	ENSG00000254260.1	+	lincRNA	KNOWN	RP11-369E15.1	1	4	-0.255250
chr8	20952645	20973877	20963261	ENSG00000254092.1	-	lincRNA	KNOWN	RP11-369E15.3	1	2	0.064182
chr8	20953127	20968904	20961015	ENSG00000253147.5	+	lincRNA	KNOWN	RP11-369E15.4	2	5	0.076395
chr8	20954012	20968904	20961458	ENSG00000254026.1	+	lincRNA	KNOWN	RP11-369E15.2	1	4	0.076395
chr8	20973797	20995119	20984458	ENSG00000253199.1	+	lincRNA	KNOWN	RP11-421P23.1	2	5	-0.047071
chr8	21023296	21029058	21026177	ENSG00000254040.1	+	lincRNA	KNOWN	RP11-421P23.2	1	4	-0.360135
chr8	21129990	21130100	21130045	ENSG00000280215.1	-	TEC	KNOWN	RP11-279N21.1	1	1	0.203944
chr8	21156131	21156233	21156182	ENSG00000215945.2	+	miRNA	NOVEL	AC021613.1	1	1	-0.143896
chr8	21298206	21309449	21303827	ENSG00000254334.1	+	lincRNA	KNOWN	RP11-24P4.1	2	3	-0.050302
chr8	21494028	21494116	21494072	ENSG00000266713.1	+	miRNA	NOVEL	AC009695.1	1	1	-0.100653
chr8	21549998	21550084	21550041	ENSG00000266630.1	+	miRNA	NOVEL	AC022716.1	1	1	-0.025002
chr8	21690403	21812357	21751380	ENSG00000168546.10	-	protein_coding	KNOWN	GFRA2	8	11	0.280679
chr8	21797460	21797759	21797609	ENSG00000273484.1	+	unprocessed_pseudogene	KNOWN	OR6R2P	1	1	0.421299
chr8	21908873	21913860	21911366	ENSG00000147443.12	-	protein_coding	KNOWN	DOK2	6	5	0.457053
chr8	21919671	22006585	21963128	ENSG00000130227.16	+	protein_coding	KNOWN	XPO7	9	28	0.199953
chr8	22024125	22036897	22030511	ENSG00000158806.13	+	protein_coding	KNOWN	NPM2	14	10	0.635161
chr8	22042398	22048809	22045603	ENSG00000158815.10	+	protein_coding	KNOWN	FGF17	4	5	0.949639
chr8	22048995	22082527	22065761	ENSG00000158856.17	+	protein_coding	KNOWN	DMTN	23	16	0.903100
chr8	22089159	22104898	22097028	ENSG00000158863.21	+	protein_coding	KNOWN	FAM160B2	12	18	0.935042
chr8	22106872	22109419	22108145	ENSG00000275074.1	-	protein_coding	KNOWN	NUDT18	2	3	0.959289
chr8	22114415	22133384	22123899	ENSG00000168453.14	-	protein_coding	KNOWN	HR	9	19	1.110942
chr8	22138020	22141951	22139985	ENSG00000168476.11	-	protein_coding	KNOWN	REEP4	7	8	1.117678
chr8	22146825	22157084	22151954	ENSG00000168481.8	-	protein_coding	KNOWN	LGI3	5	8	0.969333
chr8	22156913	22164479	22160696	ENSG00000168484.12	+	protein_coding	KNOWN	SFTPC	12	6	0.902876
chr8	22164736	22212326	22188531	ENSG00000168487.17	+	protein_coding	KNOWN	BMP1	18	21	0.957474
chr8	22169338	22171710	22170524	ENSG00000177725.5	+	sense_overlapping	KNOWN	CTD-2530N21.5	2	6	0.949282
chr8	22219704	22232341	22226022	ENSG00000168490.13	-	protein_coding	KNOWN	PHYHIP	5	6	1.127816
chr8	22244962	22245043	22245002	ENSG00000208037.1	-	miRNA	KNOWN	MIR320A	1	1	0.938236
chr8	22245104	22254600	22249852	ENSG00000168495.12	+	protein_coding	KNOWN	POLR3D	5	9	0.844845
chr8	22254576	22275162	22264869	ENSG00000254064.1	-	antisense	KNOWN	CTD-2530N21.4	1	2	0.717561
chr8	22275297	22357563	22316430	ENSG00000197181.11	+	protein_coding	KNOWN	PIWIL2	5	23	0.521318
chr8	22367249	22434129	22400689	ENSG00000104635.13	+	protein_coding	KNOWN	SLC39A14	12	9	0.810601
chr8	22389865	22390655	22390260	ENSG00000241026.1	-	unprocessed_pseudogene	KNOWN	CTD-2036J7.1	1	2	0.968466
chr8	22434391	22434497	22434444	ENSG00000201761.1	+	snRNA	KNOWN	RNU6-336P	1	1	0.591787
chr8	22440819	22541142	22490980	ENSG00000120910.14	+	protein_coding	KNOWN	PPP3CC	8	15	0.266558
chr8	22492631	22493044	22492837	ENSG00000254272.1	+	processed_pseudogene	KNOWN	RP11-382J24.2	1	1	0.384443
chr8	22540845	22545405	22543125	ENSG00000251034.1	-	antisense	KNOWN	RP11-582J16.4	1	2	0.361880
chr8	22544986	22575788	22560387	ENSG00000120896.13	+	protein_coding	KNOWN	SORBS3	22	21	0.784076
chr8	22565997	22567171	22566584	ENSG00000254230.1	-	antisense	KNOWN	RP11-582J16.3	1	2	0.797249
chr8	22578279	22598025	22588152	ENSG00000120913.23	+	protein_coding	KNOWN	PDLIM2	21	10	1.180632
chr8	22589274	22602084	22595679	ENSG00000248235.6	+	protein_coding	KNOWN	AC037459.4	3	5	1.281643
chr8	22599601	22604150	22601875	ENSG00000241852.9	+	protein_coding	KNOWN	C8orf58	7	7	1.292290
chr8	22604632	22621514	22613073	ENSG00000158941.16	+	protein_coding	KNOWN	CCAR2	14	21	1.048318
chr8	22613908	22616657	22615282	ENSG00000253200.1	-	antisense	KNOWN	RP11-582J16.5	1	1	0.934606
chr8	22620418	22669148	22644783	ENSG00000147439.11	-	protein_coding	KNOWN	BIN3	11	9	0.872064
chr8	22679013	22684009	22681511	ENSG00000261026.1	-	sense_overlapping	KNOWN	CTD-3247F14.2	1	1	0.819466
chr8	22687659	22693302	22690480	ENSG00000179388.8	-	protein_coding	KNOWN	EGR3	5	3	0.752986
chr8	22690150	22798616	22744383	ENSG00000253125.1	+	processed_transcript	KNOWN	RP11-459E5.1	3	5	0.828338
chr8	22713251	23000000	22856625	ENSG00000134020.7	-	protein_coding	KNOWN	PEBP4	3	7	0.650795
chr8	22877972	22888022	22882997	ENSG00000248738.6	+	antisense	KNOWN	RP11-87E22.2	3	4	0.626914
chr8	22895434	22897813	22896623	ENSG00000253142.1	-	sense_intronic	KNOWN	RP11-87E22.1	1	2	0.592794
chr8	22977877	22978127	22978002	ENSG00000240116.3	+	misc_RNA	KNOWN	RN7SL303P	1	1	0.537792
chr8	22984596	23019335	23001965	ENSG00000245025.2	-	antisense	KNOWN	RP11-875O11.1	2	2	0.720030
chr8	22987417	23020199	23003808	ENSG00000008853.16	+	protein_coding	KNOWN	RHOBTB2	8	12	0.737993
chr8	23020133	23069179	23044656	ENSG00000120889.12	-	protein_coding	KNOWN	TNFRSF10B	8	10	0.552698
chr8	23068229	23083619	23075924	ENSG00000246130.1	+	antisense	KNOWN	RP11-875O11.2	1	3	0.559751
chr8	23071377	23074488	23072932	ENSG00000253616.5	-	antisense	KNOWN	RP11-875O11.3	2	2	0.600380
chr8	23084355	23117437	23100896	ENSG00000173535.13	+	protein_coding	KNOWN	TNFRSF10C	5	6	0.540936
chr8	23135588	23164030	23149809	ENSG00000173530.5	-	protein_coding	KNOWN	TNFRSF10D	1	9	0.597039
chr8	23189279	23190675	23189977	ENSG00000253930.1	+	antisense	KNOWN	RP11-1149O23.2	1	2	0.680678
chr8	23190452	23225126	23207789	ENSG00000104689.9	-	protein_coding	KNOWN	TNFRSF10A	4	10	0.435261
chr8	23206918	23207369	23207143	ENSG00000243265.1	+	processed_pseudogene	KNOWN	RPL23AP55	1	1	0.587623
chr8	23224471	23230926	23227698	ENSG00000246582.2	+	processed_transcript	KNOWN	RP11-1149O23.3	3	3	0.275686
chr8	23225233	23230915	23228074	ENSG00000250714.3	-	antisense	KNOWN	RP11-1149O23.4	1	2	0.280259
chr8	23243637	23262000	23252818	ENSG00000147457.13	+	protein_coding	KNOWN	CHMP7	10	11	0.492795
chr8	23270120	23296279	23283199	ENSG00000104679.10	+	protein_coding	KNOWN	R3HCC1	10	9	0.359625
chr8	23297189	23425328	23361258	ENSG00000134013.15	-	protein_coding	KNOWN	LOXL2	15	14	0.625024
chr8	23336171	23366125	23351148	ENSG00000253837.1	+	processed_transcript	KNOWN	RP11-177H13.2	2	3	0.668335
chr8	23385783	23457695	23421739	ENSG00000197217.12	-	protein_coding	KNOWN	ENTPD4	11	13	0.494206
chr8	23458601	23484971	23471786	ENSG00000253390.1	+	lincRNA	KNOWN	CTC-756D1.2	1	2	0.276612
chr8	23483016	23483534	23483275	ENSG00000253483.1	-	processed_pseudogene	KNOWN	CTC-756D1.1	1	1	0.274322
chr8	23493009	23494198	23493603	ENSG00000253986.1	-	lincRNA	KNOWN	CTC-756D1.3	1	2	0.369727
chr8	23528805	23575463	23552134	ENSG00000147454.13	+	protein_coding	KNOWN	SLC25A37	12	4	0.481180
chr8	23600026	23600138	23600082	ENSG00000252067.1	-	snRNA	KNOWN	RNU4-71P	1	1	0.100074
chr8	23634876	23635507	23635191	ENSG00000253488.1	-	processed_pseudogene	KNOWN	FAM60DP	1	1	0.176384
chr8	23678693	23682927	23680810	ENSG00000167034.9	-	protein_coding	KNOWN	NKX3-1	2	3	-0.060907
chr8	23702451	23706598	23704524	ENSG00000180053.7	-	protein_coding	KNOWN	NKX2-6	1	2	0.612324
chr8	23707141	23789487	23748314	ENSG00000253471.1	+	lincRNA	KNOWN	RP11-175E9.1	1	3	0.428395
chr8	23726331	23743042	23734686	ENSG00000254002.1	-	lincRNA	KNOWN	RP11-213G6.2	1	3	0.293692
chr8	23768556	23768645	23768600	ENSG00000216123.1	-	miRNA	NOVEL	AC012119.1	1	1	0.332390
chr8	23805933	23806154	23806043	ENSG00000271118.1	-	processed_pseudogene	KNOWN	RP11-175E9.2	1	1	0.058044
chr8	23806229	23806377	23806303	ENSG00000207027.1	-	snoRNA	NOVEL	SNORA67	1	1	0.058044
chr8	23841915	23854807	23848361	ENSG00000159167.11	-	protein_coding	KNOWN	STC1	2	4	0.182914
chr8	24076997	24077158	24077077	ENSG00000207201.1	-	snRNA	KNOWN	RNU1-148P	1	1	-0.326234
chr8	24169957	24177080	24173518	ENSG00000253891.1	-	lincRNA	KNOWN	RP11-203E8.1	1	3	-0.164036
chr8	24294040	24359018	24326529	ENSG00000042980.12	+	protein_coding	KNOWN	ADAM28	12	23	-0.476636
chr8	24295814	24912073	24603943	ENSG00000253535.5	-	antisense	KNOWN	RP11-624C23.1	4	5	-0.389355
chr8	24384285	24406013	24395149	ENSG00000134028.14	+	protein_coding	KNOWN	ADAMDEC1	4	15	-0.487852
chr8	24440930	24526970	24483950	ENSG00000069206.15	+	protein_coding	KNOWN	ADAM7	4	23	-0.479160
chr8	24490312	24514829	24502570	ENSG00000253643.5	-	antisense	KNOWN	RP11-561E1.1	4	5	-0.544823
chr8	24811213	24811298	24811255	ENSG00000277760.1	+	miRNA	NOVEL	AF106564.1	1	1	-0.561358
chr8	24912165	24914717	24913441	ENSG00000272163.1	-	antisense	KNOWN	GS1-72M22.1	1	1	-0.156921
chr8	24913012	24919098	24916055	ENSG00000104722.13	+	protein_coding	KNOWN	NEFM	6	4	-0.156921
chr8	24950955	24957110	24954032	ENSG00000277586.1	-	protein_coding	KNOWN	NEFL	3	6	0.013565
chr8	24956621	24957110	24956865	ENSG00000272157.1	+	antisense	KNOWN	CTD-2168K21.2	1	1	0.013565
chr8	24992002	25009777	25000889	ENSG00000253832.1	+	lincRNA	KNOWN	CTD-2168K21.1	1	3	-0.337401
chr8	25141394	25141968	25141681	ENSG00000253670.1	-	processed_pseudogene	KNOWN	RP11-429O2.1	1	1	-0.279977
chr8	25184723	25418082	25301402	ENSG00000147459.17	+	protein_coding	KNOWN	DOCK5	12	52	0.276315
chr8	25282121	25282217	25282169	ENSG00000277665.1	-	miRNA	NOVEL	AC091185.1	1	1	0.203023
chr8	25345402	25345474	25345438	ENSG00000274988.1	+	miRNA	KNOWN	MIR6876	1	1	0.240514
chr8	25419260	25424654	25421957	ENSG00000147437.9	-	protein_coding	KNOWN	GNRH1	2	4	0.297391
chr8	25425521	25426580	25426050	ENSG00000253476.1	-	lincRNA	KNOWN	RP11-395I14.2	1	2	0.297391
chr8	25427847	25458476	25443161	ENSG00000104756.15	-	protein_coding	KNOWN	KCTD9	11	12	0.060746
chr8	25458997	25507920	25483458	ENSG00000184661.13	+	protein_coding	KNOWN	CDCA2	5	15	0.237283
chr8	25685798	25687524	25686661	ENSG00000253100.1	+	lincRNA	KNOWN	RP11-219J21.1	1	2	0.375164
chr8	25776679	25777456	25777067	ENSG00000253342.1	+	lincRNA	KNOWN	RP11-219J21.2	1	2	-0.315008
chr8	25834129	25840135	25837132	ENSG00000254178.1	-	lincRNA	KNOWN	RP11-299D14.2	1	2	-0.117462
chr8	25841730	26045397	25943563	ENSG00000221818.8	-	protein_coding	KNOWN	EBF2	4	16	0.011063
chr8	26136880	26136998	26136939	ENSG00000199620.1	+	rRNA	KNOWN	RNA5SP258	1	1	0.236763
chr8	26254883	26256628	26255755	ENSG00000249213.1	-	processed_pseudogene	KNOWN	RP11-98P2.1	1	2	0.066152
chr8	26291491	26372680	26332085	ENSG00000221914.8	+	protein_coding	KNOWN	PPP2R2A	24	10	0.139633
chr8	26379259	26382953	26381106	ENSG00000228451.3	-	transcribed_processed_pseudogene	KNOWN	SDAD1P1	2	2	-0.191402
chr8	26382898	26505636	26444267	ENSG00000104765.14	+	protein_coding	KNOWN	BNIP3L	8	7	0.238158
chr8	26422593	26423929	26423261	ENSG00000253430.1	+	sense_intronic	KNOWN	RP11-14I17.2	1	2	-0.007544
chr8	26433029	26434065	26433547	ENSG00000251203.1	-	processed_pseudogene	KNOWN	RP11-14I17.1	1	2	0.182447
chr8	26440491	26442595	26441543	ENSG00000254362.1	+	sense_intronic	KNOWN	RP11-14I17.3	1	4	0.182447
chr8	26504686	26514092	26509389	ENSG00000240694.8	-	protein_coding	KNOWN	PNMA2	8	4	0.199914
chr8	26514275	26658178	26586226	ENSG00000092964.16	+	protein_coding	KNOWN	DPYSL2	8	14	0.164071
chr8	26547669	26548463	26548066	ENSG00000253208.1	+	processed_pseudogene	KNOWN	RP11-1G11.2	1	1	-0.214111
chr8	26748150	26867273	26807711	ENSG00000120907.17	-	protein_coding	KNOWN	ADRA1A	11	3	-0.323337
chr8	26771790	26772140	26771965	ENSG00000240519.1	+	processed_pseudogene	KNOWN	RP11-384C12.1	1	1	-0.421632
chr8	26835817	26836300	26836058	ENSG00000253813.1	-	processed_pseudogene	KNOWN	COX6B1P4	1	1	0.036950
chr8	27010486	27010746	27010616	ENSG00000275115.1	+	unprocessed_pseudogene	KNOWN	RP11-613H2.3	1	1	0.207469
chr8	27011147	27012371	27011759	ENSG00000215288.4	-	processed_pseudogene	KNOWN	RP11-613H2.1	1	1	0.207469
chr8	27048853	27048963	27048908	ENSG00000221616.1	-	miRNA	KNOWN	MIR548H4	1	1	-0.044643
chr8	27063996	27065278	27064637	ENSG00000253899.1	-	processed_pseudogene	KNOWN	RP11-613H2.2	1	1	-0.290342
chr8	27086076	27087783	27086929	ENSG00000253903.2	+	lincRNA	KNOWN	RP11-521M14.2	1	2	-0.463908
chr8	27147709	27147797	27147753	ENSG00000221623.2	+	miRNA	NOVEL	AC090150.1	1	1	-0.500963
chr8	27184321	27210494	27197407	ENSG00000253888.1	+	antisense	KNOWN	RP11-521M14.1	1	3	-0.483696
chr8	27235323	27258420	27246871	ENSG00000015592.16	-	protein_coding	KNOWN	STMN4	7	8	0.050490
chr8	27284887	27311319	27298103	ENSG00000104228.12	-	protein_coding	KNOWN	TRIM35	4	6	0.430993
chr8	27311482	27459391	27385436	ENSG00000120899.17	+	protein_coding	KNOWN	PTK2B	17	36	0.397741
chr8	27433370	27433434	27433402	ENSG00000273836.1	+	miRNA	KNOWN	MIR6842	1	1	0.514225
chr8	27459761	27479883	27469822	ENSG00000120903.11	-	protein_coding	KNOWN	CHRNA2	11	7	0.382060
chr8	27490779	27545564	27518171	ENSG00000120915.13	+	protein_coding	KNOWN	EPHX2	12	19	0.188383
chr8	27560274	27589073	27574673	ENSG00000234770.1	+	unitary_pseudogene	KNOWN	GULOP	1	6	0.177184
chr8	27596917	27615031	27605974	ENSG00000120885.19	-	protein_coding	KNOWN	CLU	17	9	0.299275
chr8	27610601	27610751	27610676	ENSG00000273705.1	-	miRNA	KNOWN	MIR6843	1	1	0.465450
chr8	27633868	27676776	27655322	ENSG00000168077.13	+	protein_coding	KNOWN	SCARA3	2	6	0.287589
chr8	27679836	27679935	27679885	ENSG00000222862.2	+	snRNA	KNOWN	RNU6-1086P	1	1	0.091992
chr8	27697217	27697526	27697371	ENSG00000253560.1	-	processed_pseudogene	KNOWN	RP11-16P20.2	1	1	-0.093120
chr8	27701194	27703789	27702491	ENSG00000279302.1	+	TEC	KNOWN	RP11-16P20.4	1	1	-0.093120
chr8	27701673	27701767	27701720	ENSG00000265075.1	-	miRNA	KNOWN	MIR3622B	1	1	-0.093120
chr8	27733311	27772653	27752982	ENSG00000147419.16	-	protein_coding	KNOWN	CCDC25	11	9	0.079409
chr8	27733338	27756426	27744882	ENSG00000253875.1	+	antisense	KNOWN	RP11-16P20.3	1	4	0.005794
chr8	27771949	27812640	27792294	ENSG00000171320.14	+	protein_coding	KNOWN	ESCO2	8	12	0.031434
chr8	27773645	27773748	27773696	ENSG00000202242.1	+	snRNA	KNOWN	RNU6-1276P	1	1	0.575977
chr8	27809620	27838095	27823857	ENSG00000168078.9	-	protein_coding	KNOWN	PBK	4	8	-0.361597
chr8	27838477	27840382	27839429	ENSG00000253176.3	+	processed_pseudogene	KNOWN	RP11-1149M3.2	1	3	-0.116955
chr8	27869882	27992727	27931304	ENSG00000168079.16	-	protein_coding	KNOWN	SCARA5	4	9	0.162930
chr8	27886039	27886116	27886077	ENSG00000265847.1	-	miRNA	KNOWN	MIR4287	1	1	0.021602
chr8	27903229	27903495	27903362	ENSG00000253290.1	-	unprocessed_pseudogene	KNOWN	RP11-597M17.3	1	1	0.213178
chr8	27903566	27903715	27903640	ENSG00000253615.1	+	unprocessed_pseudogene	KNOWN	RP11-597M17.2	1	1	0.213178
chr8	27904481	27910310	27907395	ENSG00000253397.1	+	antisense	KNOWN	RP11-597M17.1	1	3	0.226103
chr8	28021964	28083871	28052917	ENSG00000189233.11	-	protein_coding	KNOWN	NUGGC	2	19	-0.078600
chr8	28089673	28191156	28140414	ENSG00000134014.16	+	protein_coding	KNOWN	ELP3	19	15	-0.133005
chr8	28225929	28227562	28226745	ENSG00000250516.1	+	processed_pseudogene	KNOWN	RP11-380I10.2	1	2	0.136386
chr8	28238430	28238905	28238667	ENSG00000253907.1	+	processed_pseudogene	KNOWN	RP11-380I10.3	1	1	-0.334273
chr8	28250063	28339255	28294659	ENSG00000253690.1	-	antisense	KNOWN	RP11-380I10.4	1	2	0.076471
chr8	28299683	28300566	28300124	ENSG00000239198.1	+	processed_pseudogene	KNOWN	RPL5P22	1	1	-0.131591
chr8	28316986	28343355	28330170	ENSG00000168081.8	+	protein_coding	KNOWN	PNOC	4	4	0.146499
chr8	28345585	28402701	28374143	ENSG00000186918.13	-	protein_coding	KNOWN	ZNF395	11	10	0.267312
chr8	28348287	28490318	28419302	ENSG00000214050.7	-	protein_coding	KNOWN	FBXO16	11	16	0.104541
chr8	28415524	28420055	28417789	ENSG00000254370.1	-	sense_intronic	KNOWN	RP11-181B11.1	1	2	0.242234
chr8	28416448	28416551	28416499	ENSG00000207361.1	+	snRNA	KNOWN	RNU6-178P	1	1	0.242234
chr8	28447264	28455902	28451583	ENSG00000253567.1	+	antisense	KNOWN	RP11-181B11.2	2	3	0.115091
chr8	28494205	28574268	28534236	ENSG00000104290.10	+	protein_coding	KNOWN	FZD3	4	8	-0.403488
chr8	28505116	28505182	28505149	ENSG00000265251.1	-	miRNA	KNOWN	MIR4288	1	1	-0.073594
chr8	28530411	28530519	28530465	ENSG00000202411.1	+	rRNA	KNOWN	RNA5SP259	1	1	-0.510044
chr8	28600469	28755599	28678034	ENSG00000012232.8	+	protein_coding	KNOWN	EXTL3	14	7	-0.007455
chr8	28696198	28701464	28698831	ENSG00000246339.5	-	antisense	KNOWN	EXTL3-AS1	4	3	0.084297
chr8	28767661	28890242	28828951	ENSG00000104299.14	-	protein_coding	KNOWN	INTS9	19	17	0.224787
chr8	28798142	28799469	28798805	ENSG00000254034.1	+	antisense	KNOWN	RP11-662B19.2	1	2	0.365010
chr8	28810103	28810418	28810260	ENSG00000242958.1	+	processed_pseudogene	KNOWN	RP11-662B19.1	1	1	0.300745
chr8	28890394	29064764	28977579	ENSG00000147421.17	+	protein_coding	KNOWN	HMBOX1	16	11	-0.069820
chr8	28915579	28915864	28915721	ENSG00000273710.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.047171
chr8	28949676	28955955	28952815	ENSG00000259196.1	+	sense_intronic	KNOWN	HMBOX1-IT1	1	2	-0.178527
chr8	29048494	29048604	29048549	ENSG00000200719.1	-	rRNA	KNOWN	RNA5SP260	1	1	-0.306558
chr8	29055935	29056685	29056310	ENSG00000259366.1	+	sense_intronic	KNOWN	CTD-2647L4.4	1	2	0.480889
chr8	29067279	29263124	29165201	ENSG00000197892.12	-	protein_coding	KNOWN	KIF13B	6	40	0.050160
chr8	29067279	29068454	29067866	ENSG00000259607.1	+	antisense	KNOWN	CTD-2647L4.5	1	2	0.480889
chr8	29110573	29140729	29125651	ENSG00000254129.1	+	antisense	KNOWN	CTD-2647L4.1	2	3	-0.111820
chr8	29218905	29219472	29219188	ENSG00000253770.1	+	processed_pseudogene	KNOWN	HMGB1P23	1	1	0.183734
chr8	29269974	29270061	29270017	ENSG00000212034.1	-	miRNA	NOVEL	AC084262.1	1	1	0.236080
chr8	29313756	29313848	29313802	ENSG00000263392.1	-	miRNA	NOVEL	AC084262.2	1	1	-0.003977
chr8	29323264	29323356	29323310	ENSG00000266476.1	-	miRNA	NOVEL	AC084262.3	1	1	-0.003977
chr8	29333064	29350668	29341866	ENSG00000120875.8	-	protein_coding	KNOWN	DUSP4	2	5	0.137034
chr8	29352420	29353170	29352795	ENSG00000260253.1	-	sense_overlapping	KNOWN	RP4-676L2.1	1	1	0.262722
chr8	29527312	29530323	29528817	ENSG00000253632.1	+	lincRNA	KNOWN	RP11-486M23.1	1	2	0.298116
chr8	29548171	29564341	29556256	ENSG00000253182.1	+	lincRNA	KNOWN	RP11-486M23.2	1	2	0.001385
chr8	29587001	29588426	29587713	ENSG00000280147.1	+	TEC	KNOWN	RP11-486M23.3	1	1	0.085328
chr8	29626721	29626854	29626787	ENSG00000280487.1	-	miRNA	NOVEL	AC069181.1	1	1	0.107178
chr8	29632091	29632644	29632367	ENSG00000243844.1	+	processed_pseudogene	KNOWN	RPL17P33	1	1	0.284637
chr8	29673922	29748109	29711015	ENSG00000251191.7	-	lincRNA	KNOWN	LINC00589	2	4	0.173060
chr8	29748309	29798492	29773400	ENSG00000253490.5	+	lincRNA	KNOWN	AC145110.1	3	4	0.157215
chr8	29815004	29854543	29834773	ENSG00000248964.6	-	lincRNA	KNOWN	RP11-94H18.1	2	3	0.295778
chr8	29864644	29871661	29868152	ENSG00000254086.1	+	lincRNA	KNOWN	RP11-94H18.2	1	2	0.301954
chr8	29905735	29908956	29907345	ENSG00000253604.1	+	lincRNA	KNOWN	RP11-489E7.1	1	2	0.385723
chr8	29921513	29953724	29937618	ENSG00000253279.5	+	lincRNA	KNOWN	FAM183CP	2	3	0.065525
chr8	29928605	29928689	29928647	ENSG00000221003.1	+	miRNA	NOVEL	AC131254.1	1	1	0.033098
chr8	29957272	29957348	29957310	ENSG00000264788.1	-	miRNA	KNOWN	MIR3148	1	1	-0.041532
chr8	30027713	30028900	30028306	ENSG00000254013.1	+	processed_pseudogene	KNOWN	MAP2K1P1	1	1	0.221922
chr8	30043801	30043908	30043854	ENSG00000239175.1	-	snRNA	KNOWN	RNU6-1218P	1	1	-0.132882
chr8	30063012	30083208	30073110	ENSG00000133872.13	-	protein_coding	KNOWN	SARAF	14	6	0.227141
chr8	30082758	30083467	30083112	ENSG00000272256.1	+	antisense	KNOWN	RP11-489E7.4	1	1	0.188207
chr8	30095398	30177208	30136303	ENSG00000104660.17	+	protein_coding	KNOWN	LEPROTL1	8	6	0.172820
chr8	30117384	30117779	30117581	ENSG00000241511.1	-	processed_pseudogene	KNOWN	RPS15AP24	1	1	0.191527
chr8	30131824	30144686	30138255	ENSG00000177669.3	-	protein_coding	KNOWN	MBOAT4	1	3	0.359613
chr8	30155830	30156232	30156031	ENSG00000271869.1	-	lincRNA	KNOWN	RP11-51J9.5	1	1	-0.012345
chr8	30156297	30183640	30169968	ENSG00000104671.7	+	protein_coding	KNOWN	DCTN6	6	7	-0.051416
chr8	30176554	30180888	30178721	ENSG00000253708.1	-	antisense	KNOWN	RP11-51J9.4	1	2	-0.090662
chr8	30197404	30198048	30197726	ENSG00000272375.1	+	lincRNA	KNOWN	RP11-51J9.6	1	1	0.159106
chr8	30237382	30240997	30239189	ENSG00000248159.1	+	processed_pseudogene	KNOWN	HSPA8P11	1	4	0.384443
chr8	30249502	30250092	30249797	ENSG00000254316.1	-	processed_pseudogene	KNOWN	CTD-2345M20.2	1	1	0.362893
chr8	30331961	30332277	30332119	ENSG00000253346.1	-	processed_pseudogene	KNOWN	CTD-3107M8.1	1	1	0.136159
chr8	30349866	30350347	30350106	ENSG00000254152.1	-	processed_pseudogene	KNOWN	CTD-3107M8.2	1	1	0.349618
chr8	30351873	30353518	30352695	ENSG00000127589.4	+	transcribed_processed_pseudogene	KNOWN	TUBBP1	2	1	0.431198
chr8	30382119	30385401	30383760	ENSG00000254109.5	-	antisense	KNOWN	RBPMS-AS1	3	4	0.447575
chr8	30384479	30572261	30478370	ENSG00000157110.15	+	protein_coding	KNOWN	RBPMS	20	10	0.331012
chr8	30552345	30553766	30553055	ENSG00000279041.1	+	TEC	KNOWN	CTD-2373N4.3	1	1	0.639480
chr8	30578318	30658251	30618284	ENSG00000197265.8	-	protein_coding	KNOWN	GTF2E2	5	8	0.108216
chr8	30596914	30597532	30597223	ENSG00000253112.1	+	antisense	KNOWN	CTD-2373N4.5	1	2	0.193139
chr8	30638600	30646064	30642332	ENSG00000253457.2	+	protein_coding	KNOWN	SMIM18	2	4	0.008091
chr8	30643689	30643802	30643745	ENSG00000254172.1	+	snRNA	KNOWN	RNU5A-3P	1	1	0.008091
chr8	30678061	30727926	30702993	ENSG00000104687.12	-	protein_coding	KNOWN	GSR	6	13	0.118452
chr8	30732247	30767006	30749626	ENSG00000104691.14	+	protein_coding	KNOWN	UBXN8	10	9	0.409870
chr8	30754236	30754539	30754387	ENSG00000271081.1	-	processed_pseudogene	KNOWN	RP11-465K4.4	1	1	0.472897
chr8	30774457	30814314	30794385	ENSG00000104695.12	-	protein_coding	KNOWN	PPP2CB	10	7	0.121730
chr8	30831544	30890606	30861075	ENSG00000133863.6	-	protein_coding	KNOWN	TEX15	3	7	-0.455122
chr8	30921060	30921335	30921197	ENSG00000253204.1	+	processed_pseudogene	KNOWN	RP5-1009N12.1	1	1	-0.010106
chr8	30983459	30984321	30983890	ENSG00000253793.1	-	processed_pseudogene	KNOWN	RP11-293D9.2	1	1	-0.227698
chr8	30995802	31033715	31014758	ENSG00000172733.11	-	protein_coding	KNOWN	PURG	3	2	-0.141802
chr8	31033801	31173769	31103785	ENSG00000165392.9	+	protein_coding	KNOWN	WRN	3	35	-0.278170
chr8	31131539	31131802	31131670	ENSG00000253579.1	-	processed_pseudogene	KNOWN	SUMO2P16	1	1	-0.136540
chr8	31167078	31177167	31172122	ENSG00000253961.1	-	antisense	KNOWN	RP11-363L24.3	2	4	-0.366978
chr8	31219894	31220984	31220439	ENSG00000229211.3	-	processed_pseudogene	KNOWN	KCTD9P6	1	2	-0.159927
chr8	31275596	31384279	31329937	ENSG00000253377.1	+	lincRNA	KNOWN	RP11-566H8.3	1	2	-0.430712
chr8	31339197	31346479	31342838	ENSG00000254095.1	+	processed_transcript	KNOWN	RP11-566H8.2	3	4	-0.444876
chr8	31497423	31498612	31498017	ENSG00000253275.1	+	lincRNA	KNOWN	RP11-566H8.1	1	2	-0.485317
chr8	31585154	31585246	31585200	ENSG00000264794.2	+	miRNA	NOVEL	AC104000.1	1	1	-0.085795
chr8	31598099	31598204	31598151	ENSG00000222468.1	-	rRNA	KNOWN	RNA5SP261	1	1	-0.818371
chr8	31639386	32767959	32203672	ENSG00000157168.18	+	protein_coding	KNOWN	NRG1	22	13	-0.291441
chr8	32026219	32139475	32082847	ENSG00000253974.5	+	sense_intronic	KNOWN	NRG1-IT1	4	4	-0.408510
chr8	32192028	32192153	32192090	ENSG00000252261.1	-	rRNA	KNOWN	RNA5SP262	1	1	-0.441832
chr8	32256496	32256623	32256559	ENSG00000200246.1	+	rRNA	KNOWN	RNA5SP263	1	1	-0.009453
chr8	32440746	32442725	32441735	ENSG00000254049.1	+	sense_intronic	KNOWN	NRG1-IT3	1	3	-0.099489
chr8	32911493	32911598	32911545	ENSG00000212407.1	-	snRNA	KNOWN	RNU6-663P	1	1	0.060456
chr8	32996178	33044855	33020516	ENSG00000247134.6	+	lincRNA	KNOWN	RP11-11N9.4	2	3	-0.226027
chr8	33014081	33015026	33014553	ENSG00000254346.2	+	processed_pseudogene	KNOWN	MTND1P6	1	1	-0.407579
chr8	33015261	33017043	33016152	ENSG00000254090.1	+	processed_pseudogene	KNOWN	MTND2P32	1	2	-0.407579
chr8	33039523	33039793	33039658	ENSG00000253393.1	+	processed_pseudogene	KNOWN	RANP9	1	1	-0.137795
chr8	33195837	33195937	33195887	ENSG00000265562.1	+	miRNA	NOVEL	AC104037.1	1	1	0.091992
chr8	33226848	33227147	33226997	ENSG00000253993.1	-	processed_pseudogene	KNOWN	RP11-451O18.1	1	1	0.091992
chr8	33338867	33338966	33338916	ENSG00000252735.1	+	snRNA	KNOWN	RNU6-528P	1	1	0.021219
chr8	33360839	33361415	33361127	ENSG00000272338.2	-	lincRNA	KNOWN	RP11-722E23.2	1	1	0.131958
chr8	33370824	33473422	33422123	ENSG00000172728.15	-	protein_coding	KNOWN	FUT10	11	5	0.075815
chr8	33436268	33436700	33436484	ENSG00000254061.1	-	processed_pseudogene	KNOWN	RP11-359B20.1	1	1	0.179939
chr8	33473386	33513601	33493493	ENSG00000129696.12	-	protein_coding	KNOWN	TTI2	6	8	0.197836
chr8	33484750	33501260	33493005	ENSG00000198042.10	+	protein_coding	KNOWN	MAK16	5	10	0.135761
chr8	33513475	33513578	33513526	ENSG00000239039.1	+	snoRNA	KNOWN	SNORD13	1	1	0.276075
chr8	33523154	33523291	33523222	ENSG00000253232.1	+	processed_pseudogene	KNOWN	RP11-359B20.5	1	1	0.276075
chr8	33540040	33540137	33540088	ENSG00000252505.1	+	snoRNA	NOVEL	SNORA70	1	1	0.226921
chr8	33540185	33540493	33540339	ENSG00000253995.1	+	processed_pseudogene	KNOWN	RP11-10D7.5	1	1	0.226921
chr8	33547755	33567125	33557440	ENSG00000133874.1	-	protein_coding	KNOWN	RNF122	1	6	0.177343
chr8	33580210	33580508	33580359	ENSG00000240189.3	-	misc_RNA	KNOWN	RN7SL621P	1	1	0.150885
chr8	33591332	33600106	33595719	ENSG00000133878.8	-	protein_coding	KNOWN	DUSP26	3	4	0.272073
chr8	33604856	34039008	33821932	ENSG00000253642.5	+	lincRNA	KNOWN	RP11-317N12.1	4	6	-0.180482
chr8	33641581	33641939	33641760	ENSG00000253684.1	-	processed_pseudogene	KNOWN	BUD31P1	1	1	0.212622
chr8	33715784	33716070	33715927	ENSG00000263794.2	+	misc_RNA	KNOWN	RN7SL457P	1	1	-0.028302
chr8	33722305	33723079	33722692	ENSG00000253569.1	-	processed_pseudogene	KNOWN	VENTXP5	1	1	-0.028302
chr8	33859480	33860223	33859851	ENSG00000240738.1	-	processed_pseudogene	KNOWN	RP1-273G13.1	1	1	-0.232011
chr8	33969567	33969879	33969723	ENSG00000188512.6	-	processed_pseudogene	KNOWN	RP1-273G13.2	1	1	-0.180693
chr8	33973701	34009595	33991648	ENSG00000254194.5	-	lincRNA	KNOWN	RP1-273G13.3	2	4	-0.204532
chr8	34174886	34184895	34179890	ENSG00000254302.1	+	lincRNA	KNOWN	RP11-431M3.1	1	2	-0.525761
chr8	34228439	34346731	34287585	ENSG00000253108.1	+	lincRNA	KNOWN	RP1-84O15.2	1	5	-0.438133
chr8	34229294	34248946	34239120	ENSG00000254033.1	-	lincRNA	KNOWN	RP11-431M3.2	1	2	-0.229941
chr8	34322992	34323642	34323317	ENSG00000215264.4	-	processed_pseudogene	KNOWN	RPL10AP3	1	1	-0.366214
chr8	34784052	34864798	34824425	ENSG00000254344.1	+	lincRNA	KNOWN	LINC01288	1	4	-0.446321
chr8	34874159	34874633	34874396	ENSG00000243181.2	+	processed_pseudogene	KNOWN	RP11-734J24.1	1	1	-0.356213
chr8	34970206	34970299	34970252	ENSG00000265560.1	+	miRNA	NOVEL	AC098612.1	1	1	-0.551864
chr8	35235457	35796550	35516003	ENSG00000156687.10	+	protein_coding	KNOWN	UNC5D	7	18	-0.371849
chr8	35254344	35256605	35255474	ENSG00000279099.1	+	TEC	KNOWN	RP11-595O22.1	1	1	-0.589479
chr8	35525176	35525763	35525469	ENSG00000232024.2	-	processed_pseudogene	KNOWN	LSM12P1	1	1	-0.089178
chr8	35862123	35970665	35916394	ENSG00000253452.5	+	lincRNA	KNOWN	RP11-473J6.1	2	7	-0.194023
chr8	36004316	36095046	36049681	ENSG00000253524.1	-	lincRNA	KNOWN	RP11-89M20.2	2	3	-0.359841
chr8	36121398	36121683	36121540	ENSG00000254309.1	-	processed_pseudogene	KNOWN	RP11-89M20.1	1	1	-0.584469
chr8	36277763	36278886	36278324	ENSG00000253504.1	-	unprocessed_pseudogene	KNOWN	MTCYBP19	1	1	-0.382788
chr8	36278960	36279483	36279221	ENSG00000254384.1	+	unprocessed_pseudogene	KNOWN	MTND6P19	1	1	-0.382788
chr8	36279491	36279696	36279593	ENSG00000253685.1	-	unprocessed_pseudogene	KNOWN	MTND5P41	1	1	-0.382788
chr8	36308245	36308364	36308304	ENSG00000253610.1	+	processed_pseudogene	KNOWN	RP11-139F9.1	1	1	0.159555
chr8	36309584	36309690	36309637	ENSG00000206871.1	-	snRNA	KNOWN	RNU6-533P	1	1	0.159555
chr8	36321039	36321404	36321221	ENSG00000254320.1	-	processed_pseudogene	KNOWN	RP11-593P24.4	1	2	-0.301351
chr8	36537391	36779164	36658277	ENSG00000253363.5	-	lincRNA	KNOWN	RP11-962G15.1	2	5	-0.437494
chr8	36581180	36581591	36581385	ENSG00000244708.1	-	processed_pseudogene	KNOWN	RPL23P10	1	1	-0.280426
chr8	36764445	36764551	36764498	ENSG00000199985.1	+	rRNA	KNOWN	RNA5SP264	1	1	-0.509746
chr8	36784324	36936128	36860226	ENSG00000215262.7	+	protein_coding	KNOWN	KCNU1	5	28	-0.252629
chr8	36795255	36795862	36795558	ENSG00000274489.1	-	processed_pseudogene	KNOWN	RP11-962G15.2	1	1	-0.500706
chr8	36888482	36889307	36888894	ENSG00000219491.6	+	unprocessed_pseudogene	KNOWN	TPT1P8	1	2	-0.043785
chr8	36987977	36988412	36988194	ENSG00000243503.2	-	processed_pseudogene	KNOWN	AC090453.1	1	1	-0.098439
chr8	37067441	37069418	37068429	ENSG00000254038.1	-	lincRNA	KNOWN	RP11-419C23.1	1	2	-0.243429
chr8	37095150	37095390	37095270	ENSG00000253650.1	+	processed_pseudogene	KNOWN	SMARCE1P4	1	1	0.201815
chr8	37173829	37173923	37173876	ENSG00000275998.1	+	miRNA	NOVEL	AC068207.1	1	1	0.013989
chr8	37326575	37331984	37329279	ENSG00000253123.3	-	processed_transcript	KNOWN	RP11-527N22.1	2	2	0.107579
chr8	37405439	37406724	37406081	ENSG00000253746.1	-	lincRNA	KNOWN	RP11-527N22.2	1	2	0.175408
chr8	37421341	37554183	37487762	ENSG00000253161.5	-	lincRNA	KNOWN	LINC01605	4	6	0.142694
chr8	37480089	37480809	37480449	ENSG00000253388.1	+	lincRNA	KNOWN	RP11-150O12.2	1	2	0.274322
chr8	37516410	37517021	37516715	ENSG00000253414.2	-	sense_intronic	KNOWN	RP11-150O12.6	1	2	0.445329
chr8	37560366	37565377	37562871	ENSG00000254111.2	+	lincRNA	KNOWN	RP11-150O12.5	1	3	0.708663
chr8	37597480	37599858	37598669	ENSG00000254290.1	-	lincRNA	KNOWN	RP11-150O12.3	2	2	0.746302
chr8	37600537	37625873	37613205	ENSG00000254306.1	-	lincRNA	KNOWN	RP11-150O12.4	1	5	0.471767
chr8	37626015	37674387	37650201	ENSG00000253344.1	-	antisense	KNOWN	RP11-346L1.2	1	2	0.361500
chr8	37668898	37669005	37668951	ENSG00000223215.1	+	snRNA	KNOWN	RNU6-607P	1	1	0.343531
chr8	37695751	37700021	37697886	ENSG00000183779.6	+	protein_coding	KNOWN	ZNF703	1	2	0.586189
chr8	37717579	37733756	37725667	ENSG00000253181.1	+	antisense	KNOWN	RP11-863K10.2	1	3	0.493492
chr8	37734761	37737426	37736093	ENSG00000183154.1	-	antisense	KNOWN	RP11-863K10.7	1	2	0.494318
chr8	37736599	37759101	37747850	ENSG00000147475.14	+	protein_coding	KNOWN	ERLIN2	11	12	0.413617
chr8	37747338	37748004	37747671	ENSG00000233170.4	-	processed_pseudogene	KNOWN	RP11-863K10.4	1	1	0.494318
chr8	37762593	37779767	37771180	ENSG00000147471.11	+	protein_coding	KNOWN	PROSC	9	8	0.412028
chr8	37784191	37844896	37814543	ENSG00000020181.17	+	protein_coding	KNOWN	ADGRA2	3	19	0.882921
chr8	37843268	37849904	37846586	ENSG00000104221.12	-	protein_coding	KNOWN	BRF2	4	5	1.073730
chr8	37858618	37899467	37879042	ENSG00000156675.15	-	protein_coding	KNOWN	RAB11FIP1	6	6	0.715937
chr8	37858949	37861333	37860141	ENSG00000280064.1	+	TEC	KNOWN	RP11-205M5.3	1	1	0.983739
chr8	37908738	37909037	37908887	ENSG00000241032.3	+	misc_RNA	KNOWN	RN7SL709P	1	1	0.333000
chr8	37934281	37940129	37937205	ENSG00000169154.5	-	protein_coding	KNOWN	GOT1L1	3	9	0.585806
chr8	37949736	37949831	37949783	ENSG00000264965.1	-	miRNA	NOVEL	AC144573.1	1	1	0.585806
chr8	37962991	37966965	37964978	ENSG00000188778.4	-	protein_coding	KNOWN	ADRB3	3	2	0.547186
chr8	37983070	37983373	37983221	ENSG00000270865.1	+	processed_pseudogene	KNOWN	RPL12P48	1	1	0.780048
chr8	38030341	38060365	38045353	ENSG00000187840.4	+	protein_coding	KNOWN	EIF4EBP1	2	3	0.512689
chr8	38062881	38063791	38063336	ENSG00000260949.1	+	sense_overlapping	KNOWN	KB-1836B5.1	1	1	0.663755
chr8	38099471	38099931	38099701	ENSG00000272128.1	+	lincRNA	KNOWN	KB-1836B5.4	1	1	0.507029
chr8	38105242	38144076	38124659	ENSG00000129691.15	+	protein_coding	KNOWN	ASH2L	12	16	0.513761
chr8	38122374	38122480	38122427	ENSG00000253437.1	+	snRNA	KNOWN	RNU6-988P	1	1	0.513693
chr8	38123274	38124651	38123962	ENSG00000240015.2	+	antisense	KNOWN	RP11-90P5.5	1	2	0.513693
chr8	38143649	38151265	38147457	ENSG00000147465.11	-	protein_coding	KNOWN	STAR	4	7	0.504544
chr8	38148741	38163772	38156256	ENSG00000253356.1	+	antisense	KNOWN	RP11-90P5.2	1	2	0.452257
chr8	38163321	38176730	38170025	ENSG00000175324.9	-	protein_coding	KNOWN	LSM1	5	5	0.598362
chr8	38166012	38166118	38166065	ENSG00000253739.1	-	snRNA	KNOWN	RNU6-323P	1	1	0.446423
chr8	38176533	38213301	38194917	ENSG00000156735.10	+	protein_coding	KNOWN	BAG4	4	5	0.629762
chr8	38201699	38204238	38202968	ENSG00000248585.2	-	processed_pseudogene	KNOWN	RP11-90P5.1	1	4	0.607633
chr8	38225218	38275558	38250388	ENSG00000085788.13	+	protein_coding	KNOWN	DDHD2	24	18	0.392261
chr8	38263130	38269243	38266186	ENSG00000147535.16	-	protein_coding	KNOWN	PLPP5	15	7	0.283651
chr8	38269697	38382272	38325984	ENSG00000147548.16	-	protein_coding	KNOWN	WHSC1L1	12	24	0.332319
chr8	38275888	38276680	38276284	ENSG00000255487.1	+	antisense	KNOWN	RP11-513D5.5	1	2	0.483912
chr8	38335981	38337551	38336766	ENSG00000254898.1	+	antisense	KNOWN	RP11-513D5.2	1	2	0.406100
chr8	38382364	38383461	38382912	ENSG00000272092.1	+	lincRNA	KNOWN	RP11-350N15.5	1	1	0.492530
chr8	38386207	38409527	38397867	ENSG00000165046.12	+	protein_coding	KNOWN	LETM2	15	11	0.537592
chr8	38400536	38401683	38401109	ENSG00000254981.1	-	antisense	KNOWN	RP11-350N15.3	1	2	0.546342
chr8	38408048	38408742	38408395	ENSG00000272159.1	-	antisense	KNOWN	RP11-350N15.6	1	1	0.546342
chr8	38411138	38468834	38439986	ENSG00000077782.19	-	protein_coding	KNOWN	FGFR1	41	19	0.822066
chr8	38421889	38426096	38423992	ENSG00000255201.1	+	antisense	KNOWN	RP11-350N15.4	1	2	0.912544
chr8	38434347	38435664	38435005	ENSG00000239218.2	-	transcribed_processed_pseudogene	KNOWN	RPS20P22	2	1	0.923594
chr8	38510834	38528662	38519748	ENSG00000196166.3	-	protein_coding	KNOWN	C8orf86	2	3	0.611770
chr8	38543652	38552680	38548166	ENSG00000253361.1	-	lincRNA	KNOWN	RP11-675F6.3	1	3	0.610923
chr8	38552248	38559020	38555634	ENSG00000254100.1	-	lincRNA	KNOWN	RP11-675F6.4	1	5	0.573960
chr8	38600661	38601200	38600930	ENSG00000253570.1	-	processed_pseudogene	KNOWN	RNF5P1	1	1	0.555299
chr8	38700626	38704855	38702740	ENSG00000254321.1	-	lincRNA	KNOWN	RP11-495O10.1	1	4	0.330779
chr8	38728186	38853028	38790607	ENSG00000147526.19	+	protein_coding	KNOWN	TACC1	29	15	0.420373
chr8	38744020	38744131	38744075	ENSG00000207258.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.462511
chr8	38799643	38802296	38800969	ENSG00000253586.1	+	sense_intronic	KNOWN	RP11-723D22.2	1	2	0.481034
chr8	38844866	38846439	38845652	ENSG00000253829.1	-	antisense	KNOWN	RP11-723D22.3	1	2	0.248111
chr8	38901235	38973909	38937572	ENSG00000169499.14	+	protein_coding	KNOWN	PLEKHA2	9	12	0.526124
chr8	38970360	38973011	38971685	ENSG00000253645.1	-	antisense	KNOWN	CTD-2544N14.3	1	2	0.546996
chr8	38974164	38988662	38981413	ENSG00000169495.4	+	protein_coding	KNOWN	HTRA4	1	9	0.546996
chr8	38988808	38996824	38992816	ENSG00000169490.16	-	protein_coding	KNOWN	TM2D2	10	4	0.456370
chr8	38996869	39105144	39051006	ENSG00000168615.11	+	protein_coding	KNOWN	ADAM9	9	22	0.079795
chr8	39018615	39018683	39018649	ENSG00000207199.1	-	snoRNA	NOVEL	SNORD38	1	1	-0.057386
chr8	39106990	39284911	39195950	ENSG00000197140.14	+	protein_coding	KNOWN	ADAM32	11	25	-0.157424
chr8	39157538	39158701	39158119	ENSG00000243095.1	-	processed_pseudogene	KNOWN	RPL3P10	1	1	-0.421417
chr8	39309909	39310443	39310176	ENSG00000253160.1	-	processed_pseudogene	KNOWN	RP11-1113C11.2	1	1	-0.163460
chr8	39314591	39417378	39365984	ENSG00000196115.12	+	unitary_pseudogene	KNOWN	ADAM5	11	16	-0.477945
chr8	39451045	39522852	39486948	ENSG00000197475.11	-	unitary_pseudogene	KNOWN	ADAM3A	9	22	-0.439143
chr8	39536219	39552035	39544127	ENSG00000278810.1	+	unprocessed_pseudogene	KNOWN	RP11-122L4.2	1	3	-0.663443
chr8	39556146	39558533	39557339	ENSG00000254067.1	+	lincRNA	KNOWN	RP11-122L4.1	1	3	-0.297050
chr8	39566705	39580134	39573419	ENSG00000254082.5	+	lincRNA	KNOWN	CTD-2024D23.1	2	4	-0.570051
chr8	39584489	39730064	39657276	ENSG00000168619.15	+	protein_coding	KNOWN	ADAM18	8	20	-0.557805
chr8	39743735	39838289	39791012	ENSG00000104755.14	-	protein_coding	KNOWN	ADAM2	7	21	-0.692540
chr8	39756082	39756188	39756135	ENSG00000221018.1	-	miRNA	NOVEL	AC136365.1	1	1	-0.776764
chr8	39860219	39860525	39860372	ENSG00000253332.1	+	processed_pseudogene	KNOWN	KB-1582A10.1	1	1	-0.528160
chr8	39867436	39867812	39867624	ENSG00000253233.1	-	processed_pseudogene	KNOWN	KB-1582A10.2	1	2	-0.528160
chr8	39902275	39928444	39915359	ENSG00000131203.12	+	protein_coding	KNOWN	IDO1	9	12	-0.426364
chr8	39903775	39995248	39949511	ENSG00000253939.1	-	antisense	KNOWN	RP11-44K6.3	1	3	-0.216434
chr8	39914229	39915721	39914975	ENSG00000253838.1	+	sense_intronic	KNOWN	RP11-44K6.2	1	2	-0.413244
chr8	39918076	39920890	39919483	ENSG00000254287.1	-	antisense	KNOWN	RP11-44K6.4	1	2	-0.413244
chr8	39934614	40016391	39975502	ENSG00000188676.13	+	protein_coding	KNOWN	IDO2	4	11	-0.155165
chr8	39997869	39998499	39998184	ENSG00000253790.1	-	processed_pseudogene	KNOWN	RP11-44K6.5	1	1	-0.264152
chr8	40104169	40107935	40106052	ENSG00000253381.1	+	lincRNA	KNOWN	RP11-359E19.1	1	2	0.037836
chr8	40114651	40127468	40121059	ENSG00000253665.1	+	lincRNA	KNOWN	RP11-359E19.2	1	3	0.221034
chr8	40153455	40155308	40154381	ENSG00000176907.4	+	protein_coding	KNOWN	C8orf4	1	1	-0.076984
chr8	40161458	40172612	40167035	ENSG00000254143.1	+	lincRNA	KNOWN	RP11-470M17.2	1	4	-0.120341
chr8	40298741	40343402	40321071	ENSG00000253802.1	-	lincRNA	KNOWN	CTA-392C11.1	3	3	-0.240704
chr8	40370028	40401848	40385938	ENSG00000253354.1	+	lincRNA	KNOWN	CTA-392C11.2	1	4	-0.243011
chr8	40519565	40520158	40519861	ENSG00000272479.1	-	lincRNA	KNOWN	RP11-301G7.1	1	1	-0.044697
chr8	40530590	40897833	40714211	ENSG00000165061.14	-	protein_coding	KNOWN	ZMAT4	9	7	-0.248921
chr8	40900016	40901854	40900935	ENSG00000254383.1	-	lincRNA	KNOWN	RP11-465K16.1	1	2	0.020909
chr8	41032892	41032998	41032945	ENSG00000206867.1	+	snRNA	KNOWN	RNU6-356P	1	1	-0.111803
chr8	41261958	41309497	41285727	ENSG00000104332.11	-	protein_coding	KNOWN	SFRP1	2	3	0.132082
chr8	41271048	41271143	41271095	ENSG00000263372.1	-	miRNA	KNOWN	MIR548AO	1	1	0.249533
chr8	41271431	41271566	41271498	ENSG00000239281.2	+	processed_pseudogene	KNOWN	RPS29P2	1	1	0.249533
chr8	41275115	41277003	41276059	ENSG00000253509.1	-	sense_intronic	KNOWN	CTD-3080F16.3	1	2	0.249533
chr8	41298163	41298265	41298214	ENSG00000206852.1	+	snRNA	KNOWN	RNU6-895P	1	1	0.021602
chr8	41426655	41426727	41426691	ENSG00000238936.1	+	snoRNA	NOVEL	SNORD65	1	1	-0.213716
chr8	41435298	41440419	41437858	ENSG00000253396.1	+	lincRNA	KNOWN	RP11-15G16.1	1	3	-0.093120
chr8	41490396	41510980	41500688	ENSG00000147533.16	+	protein_coding	KNOWN	GOLGA7	7	6	0.251332
chr8	41511240	41512521	41511880	ENSG00000253943.1	+	processed_pseudogene	KNOWN	KRT18P37	1	1	0.248582
chr8	41529206	41545046	41537126	ENSG00000147536.11	+	protein_coding	KNOWN	GINS4	9	8	0.165277
chr8	41534155	41578368	41556261	ENSG00000253133.1	-	antisense	KNOWN	RP11-360L9.4	1	3	0.349561
chr8	41540381	41545044	41542712	ENSG00000253174.2	-	antisense	KNOWN	RP11-360L9.7	2	2	0.160887
chr8	41577187	41625001	41601094	ENSG00000158669.11	+	protein_coding	KNOWN	GPAT4	11	13	0.295595
chr8	41609692	41621502	41615597	ENSG00000264578.1	-	antisense	KNOWN	RP11-360L9.8	1	2	0.349049
chr8	41645178	41650669	41647923	ENSG00000165066.12	-	protein_coding	KNOWN	NKX6-3	2	3	0.483639
chr8	41653220	41896762	41774991	ENSG00000029534.19	-	protein_coding	KNOWN	ANK1	14	43	0.483455
chr8	41660414	41660525	41660469	ENSG00000274705.1	-	miRNA	NOVEL	AC113133.1	1	1	0.737327
chr8	41660991	41665566	41663278	ENSG00000253389.2	+	antisense	KNOWN	RP11-930P14.1	3	2	0.737327
chr8	41734814	41734892	41734853	ENSG00000277839.1	+	miRNA	NOVEL	AC113133.2	1	1	0.357725
chr8	41803349	41803450	41803399	ENSG00000207101.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.423835
chr8	41828165	41829934	41829049	ENSG00000260588.1	-	lincRNA	KNOWN	RP11-930P14.2	1	1	0.266866
chr8	41840059	41840339	41840199	ENSG00000241834.3	-	misc_RNA	KNOWN	RN7SL149P	1	1	0.350185
chr8	41929479	42051990	41990734	ENSG00000083168.9	-	protein_coding	KNOWN	KAT6A	8	18	0.079277
chr8	42043504	42043575	42043539	ENSG00000238966.1	-	snoRNA	NOVEL	SNORD112	1	1	0.066606
chr8	42078863	42078973	42078918	ENSG00000277937.1	-	miRNA	NOVEL	AC103724.1	1	1	0.146440
chr8	42101318	42101836	42101577	ENSG00000244235.2	+	processed_pseudogene	KNOWN	RP11-589C21.1	1	1	0.303496
chr8	42128774	42129249	42129011	ENSG00000253135.1	-	processed_pseudogene	KNOWN	RP11-589C21.2	1	1	0.385937
chr8	42139461	42139752	42139606	ENSG00000271938.1	-	lincRNA	KNOWN	RP11-589C21.6	1	1	0.196149
chr8	42151772	42152763	42152267	ENSG00000261449.1	-	antisense	KNOWN	RP11-589C21.5	1	1	0.328059
chr8	42152946	42171673	42162309	ENSG00000070718.11	+	protein_coding	KNOWN	AP3M2	17	10	0.354444
chr8	42175233	42207724	42191478	ENSG00000104368.17	-	protein_coding	KNOWN	PLAT	12	15	0.711534
chr8	42233675	42271197	42252436	ENSG00000253408.5	-	antisense	KNOWN	RP11-231D20.2	6	3	0.301330
chr8	42271302	42332653	42301977	ENSG00000104365.13	+	protein_coding	KNOWN	IKBKB	30	22	0.587160
chr8	42338454	42371808	42355131	ENSG00000070501.11	+	protein_coding	KNOWN	POLB	17	15	0.412791
chr8	42341767	42342634	42342200	ENSG00000240395.1	-	processed_pseudogene	KNOWN	RPL5P23	1	1	0.663305
chr8	42374068	42377232	42375650	ENSG00000104371.4	-	protein_coding	KNOWN	DKK4	1	4	0.291025
chr8	42391624	42405897	42398760	ENSG00000078668.13	+	protein_coding	KNOWN	VDAC3	12	11	0.229495
chr8	42416475	42541926	42479200	ENSG00000168575.9	-	protein_coding	KNOWN	SLC20A2	14	11	0.373809
chr8	42484600	42485019	42484809	ENSG00000254131.1	+	processed_pseudogene	KNOWN	RP11-1007J8.1	1	1	0.409283
chr8	42537529	42538304	42537916	ENSG00000254165.1	-	antisense	KNOWN	RP11-503E24.2	1	2	0.355026
chr8	42541155	42555193	42548174	ENSG00000176209.11	+	protein_coding	KNOWN	SMIM19	8	4	0.356053
chr8	42697376	42737407	42717391	ENSG00000147432.6	+	protein_coding	KNOWN	CHRNB3	3	6	0.249876
chr8	42705583	42721946	42713764	ENSG00000255101.1	-	antisense	KNOWN	RP11-412B14.1	1	3	0.215150
chr8	42725547	42726228	42725887	ENSG00000255361.1	-	processed_pseudogene	KNOWN	RP11-412B14.2	1	1	0.168861
chr8	42752620	42796392	42774506	ENSG00000147434.8	-	protein_coding	KNOWN	CHRNA6	5	6	0.288851
chr8	42836674	42843325	42839999	ENSG00000131931.8	-	protein_coding	KNOWN	THAP1	4	3	0.084832
chr8	42849637	42897290	42873463	ENSG00000120925.13	-	protein_coding	KNOWN	RNF170	9	7	0.359941
chr8	42881236	42881517	42881376	ENSG00000242719.3	+	misc_RNA	KNOWN	RN7SL806P	1	1	0.290158
chr8	42896197	42896275	42896236	ENSG00000266044.1	-	miRNA	KNOWN	MIR4469	1	1	0.411982
chr8	42896932	43030539	42963735	ENSG00000168172.8	+	protein_coding	KNOWN	HOOK3	6	22	0.294928
chr8	42949388	42949495	42949441	ENSG00000202514.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.219227
chr8	43018424	43077334	43047879	ENSG00000254673.1	+	protein_coding	KNOWN	RP11-598P20.5	1	6	0.102489
chr8	43034194	43085788	43059991	ENSG00000168522.12	+	protein_coding	KNOWN	FNTA	14	10	0.003437
chr8	43073474	43073618	43073546	ENSG00000200731.1	+	snRNA	KNOWN	RNU1-124P	1	1	-0.185993
chr8	43093506	43123434	43108470	ENSG00000185900.9	+	protein_coding	KNOWN	POMK	3	5	0.371962
chr8	43125995	43126397	43126196	ENSG00000254198.1	-	processed_pseudogene	KNOWN	RP11-598P20.3	1	1	0.333000
chr8	43140455	43202855	43171655	ENSG00000165102.14	+	protein_coding	KNOWN	HGSNAT	10	18	0.207188
chr8	43219960	43220809	43220384	ENSG00000253611.1	-	processed_pseudogene	KNOWN	VN1R46P	1	1	-0.101649
chr8	43246755	43246935	43246845	ENSG00000253884.1	-	processed_pseudogene	KNOWN	RP11-726G23.2	1	1	-0.503566
chr8	43247191	43247410	43247300	ENSG00000255166.1	+	processed_pseudogene	KNOWN	RP11-726G23.11	1	1	-0.503566
chr8	43251711	43251858	43251784	ENSG00000253312.1	+	processed_pseudogene	KNOWN	RP11-359P18.2	1	1	-0.471111
chr8	43253732	43254089	43253910	ENSG00000253186.2	+	unprocessed_pseudogene	KNOWN	RP11-726G23.3	1	2	-0.471111
chr8	43270198	43271960	43271079	ENSG00000253606.2	-	processed_pseudogene	KNOWN	AFG3L2P1	1	1	-0.129181
chr8	43276270	43276823	43276546	ENSG00000234713.3	-	processed_pseudogene	KNOWN	RP11-726G23.10	1	1	-0.129181
chr8	43284626	43284806	43284716	ENSG00000253707.1	-	processed_pseudogene	KNOWN	RP11-726G23.8	1	1	-0.129181
chr8	43292483	43363518	43328000	ENSG00000188877.11	+	transcribed_unprocessed_pseudogene	KNOWN	POTEA	2	14	-0.385252
chr8	43303376	43303482	43303429	ENSG00000238509.1	+	snRNA	KNOWN	RNU6-104P	1	1	-0.454903
chr8	43313948	43314200	43314074	ENSG00000255497.1	+	processed_pseudogene	KNOWN	RP11-726G23.12	1	1	-0.396895
chr8	43366713	43366789	43366751	ENSG00000280822.1	-	miRNA	NOVEL	AC022616.1	1	1	-0.587675
chr8	43372559	43372677	43372618	ENSG00000254342.1	+	processed_pseudogene	KNOWN	RP11-726G23.6	1	1	-0.167652
chr8	43378297	43378510	43378403	ENSG00000201329.2	+	snoRNA	NOVEL	U3	1	1	-0.167652
chr8	43381784	43381874	43381829	ENSG00000281402.1	-	miRNA	NOVEL	AC022616.2	1	1	-0.167652
chr8	43442902	43452912	43447907	ENSG00000250637.2	+	unprocessed_pseudogene	KNOWN	RP11-359P18.1	1	5	-0.081535
chr8	43493937	43494762	43494349	ENSG00000254069.2	+	processed_pseudogene	KNOWN	RP11-359P18.7	1	1	-0.505249
chr8	43511820	43512033	43511926	ENSG00000253319.1	-	processed_pseudogene	KNOWN	RP11-359P18.8	1	1	-0.269408
chr8	43513643	43514421	43514032	ENSG00000253418.1	+	processed_pseudogene	KNOWN	SNX18P27	1	1	-0.269408
chr8	43539137	43539472	43539304	ENSG00000254145.1	+	processed_pseudogene	KNOWN	RP11-359P18.5	1	1	-0.001118
chr8	43539973	43540927	43540450	ENSG00000253748.2	+	unprocessed_pseudogene	KNOWN	CYP4F44P	1	3	-0.001118
chr8	43542076	43544057	43543066	ENSG00000253195.2	+	unprocessed_pseudogene	KNOWN	RP11-359P18.6	1	2	-0.001118
chr8	43672823	43673075	43672949	ENSG00000253845.1	+	processed_pseudogene	KNOWN	RP11-643N23.2	1	1	-0.227381
chr8	43674270	43674591	43674430	ENSG00000253198.1	-	processed_pseudogene	KNOWN	RP11-643N23.1	1	1	-0.227381
chr8	46028804	46028892	46028848	ENSG00000276685.1	-	misc_RNA	NOVEL	pRNA	1	1	-0.367440
chr8	46549089	46550802	46549945	ENSG00000253425.2	+	unprocessed_pseudogene	KNOWN	HSPA8P13	1	2	-0.596155
chr8	46579213	46614523	46596868	ENSG00000248498.3	-	unprocessed_pseudogene	KNOWN	ASNSP1	1	10	-0.514563
chr8	46671839	46671926	46671882	ENSG00000254070.1	+	processed_pseudogene	KNOWN	RP11-790L1.3	1	1	-0.105241
chr8	46697630	46698688	46698159	ENSG00000251470.1	+	unprocessed_pseudogene	KNOWN	ASNSP4	1	3	-0.320269
chr8	46784800	46785928	46785364	ENSG00000228984.3	+	processed_pseudogene	KNOWN	RP11-101E19.8	1	1	-0.762810
chr8	46792065	46793064	46792564	ENSG00000250857.3	+	processed_pseudogene	KNOWN	TRIM60P15	1	2	-0.027590
chr8	46822237	46854307	46838272	ENSG00000253314.5	+	lincRNA	KNOWN	LINC00293	4	9	-0.338650
chr8	46827228	46827894	46827561	ENSG00000253828.3	-	unprocessed_pseudogene	KNOWN	RP11-101E19.2	1	1	-0.323046
chr8	46828117	46828413	46828265	ENSG00000282321.1	-	unprocessed_pseudogene	KNOWN	MTND1P7	1	1	-0.323046
chr8	46831050	46831156	46831103	ENSG00000252594.1	+	snRNA	KNOWN	RNU6-656P	1	1	-0.397664
chr8	46837578	46838706	46838142	ENSG00000254118.1	-	processed_pseudogene	KNOWN	MTCYBP20	1	1	-0.397664
chr8	46838788	46839205	46838996	ENSG00000254156.1	+	transcribed_processed_pseudogene	KNOWN	MTND6P20	1	1	-0.397664
chr8	46870902	46872045	46871473	ENSG00000253803.1	-	processed_pseudogene	KNOWN	RP11-101E19.7	1	1	-0.241746
chr8	46922561	46928832	46925696	ENSG00000253745.1	+	lincRNA	KNOWN	RP11-350F16.1	1	2	-0.105545
chr8	46930840	46934446	46932643	ENSG00000253782.1	-	lincRNA	KNOWN	RP11-350F16.2	1	3	0.000249
chr8	46972476	46974617	46973546	ENSG00000215179.5	-	processed_pseudogene	KNOWN	MAPK6PS4	1	1	-0.075850
chr8	47068021	47068323	47068172	ENSG00000222099.1	-	misc_RNA	KNOWN	RN7SKP32	1	1	-0.604616
chr8	47085350	47085426	47085388	ENSG00000281136.1	+	miRNA	NOVEL	AC026241.1	1	1	-0.098111
chr8	47089572	47198861	47144216	ENSG00000248347.3	-	unprocessed_pseudogene	KNOWN	RP11-1134I14.2	1	10	-0.159397
chr8	47131781	47131887	47131834	ENSG00000200986.1	-	snRNA	KNOWN	RNU6-819P	1	1	-0.379832
chr8	47157118	47157771	47157444	ENSG00000188873.4	+	processed_pseudogene	KNOWN	RPL10AP2	1	1	-0.140299
chr8	47164870	47165524	47165197	ENSG00000248531.3	+	unprocessed_pseudogene	KNOWN	NDUFA5P12	1	2	-0.140299
chr8	47189305	47189560	47189432	ENSG00000254348.1	+	processed_pseudogene	KNOWN	RP11-1134I14.4	1	1	-0.067585
chr8	47190772	47193262	47192017	ENSG00000255366.1	+	lincRNA	KNOWN	RP11-1134I14.8	1	1	0.099645
chr8	47194002	47194347	47194174	ENSG00000253502.1	-	processed_pseudogene	KNOWN	ATP6V1G1P2	1	1	0.099645
chr8	47198032	47198323	47198177	ENSG00000253817.1	-	processed_pseudogene	KNOWN	RP11-1134I14.6	1	1	0.099645
chr8	47202444	47202897	47202670	ENSG00000215177.3	-	IG_V_pseudogene	KNOWN	IGLV8OR8-1	1	2	0.099645
chr8	47260575	47736306	47498440	ENSG00000164808.16	+	protein_coding	KNOWN	SPIDR	28	21	0.093288
chr8	47511034	47512141	47511587	ENSG00000253330.1	-	processed_pseudogene	KNOWN	RP11-697N18.3	1	1	0.353577
chr8	47527397	47528148	47527772	ENSG00000269924.1	+	sense_intronic	KNOWN	RP11-697N18.4	1	1	0.353577
chr8	47546804	47547926	47547365	ENSG00000251354.3	-	unprocessed_pseudogene	KNOWN	RP11-697N18.1	1	2	-0.055907
chr8	47592147	47592609	47592378	ENSG00000254065.1	-	processed_pseudogene	KNOWN	RP11-697N18.2	1	1	-0.250896
chr8	47667771	47667877	47667824	ENSG00000207369.1	+	snRNA	KNOWN	RNU6-665P	1	1	0.139040
chr8	47736909	47739086	47737997	ENSG00000221869.4	-	protein_coding	KNOWN	CEBPD	1	1	0.642603
chr8	47773108	47960183	47866645	ENSG00000253729.7	-	protein_coding	KNOWN	PRKDC	11	86	0.223967
chr8	47805079	47805179	47805129	ENSG00000207450.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.195703
chr8	47890058	47890130	47890094	ENSG00000211562.2	+	miRNA	NOVEL	AC103686.1	1	1	0.216250
chr8	47960185	47978160	47969172	ENSG00000104738.16	+	protein_coding	KNOWN	MCM4	16	17	0.352828
chr8	47979414	47979521	47979467	ENSG00000222522.1	+	snRNA	KNOWN	RNU6-519P	1	1	0.260192
chr8	48008400	48064708	48036554	ENSG00000169139.11	+	protein_coding	KNOWN	UBE2V2	8	5	0.334915
chr8	48193850	48194627	48194238	ENSG00000253843.1	-	processed_pseudogene	KNOWN	RP11-769N21.2	1	1	0.115324
chr8	48294026	48294694	48294360	ENSG00000253654.2	-	processed_pseudogene	KNOWN	CTD-2210A23.1	1	1	-0.323046
chr8	48307927	48308030	48307978	ENSG00000252710.1	-	snRNA	KNOWN	RNU6-295P	1	1	-0.323046
chr8	48316669	48316770	48316719	ENSG00000277418.1	+	rRNA	NOVEL	5S_rRNA	1	1	0.334268
chr8	48384590	48385049	48384819	ENSG00000224594.2	+	processed_pseudogene	KNOWN	RPL29P19	1	1	0.285529
chr8	48428143	48431041	48429592	ENSG00000279881.1	-	TEC	KNOWN	RP11-513O13.1	1	1	0.349423
chr8	48515852	48517089	48516470	ENSG00000253140.1	-	lincRNA	KNOWN	RP11-567J20.3	1	2	0.221072
chr8	48551567	48698510	48625038	ENSG00000253608.1	+	antisense	KNOWN	RP11-770E5.1	1	4	0.257663
chr8	48552015	48556441	48554228	ENSG00000253688.1	-	lincRNA	KNOWN	RP11-567J20.2	1	2	0.433029
chr8	48590401	48594621	48592511	ENSG00000233858.4	+	lincRNA	KNOWN	AC026904.1	1	2	0.412392
chr8	48597458	48621018	48609238	ENSG00000253702.1	-	lincRNA	KNOWN	RP11-567J20.1	1	4	0.259072
chr8	48620465	48623895	48622180	ENSG00000253455.1	+	lincRNA	KNOWN	RP11-770E5.3	1	2	0.084574
chr8	48657260	48658894	48658077	ENSG00000253892.1	-	lincRNA	KNOWN	RP11-770E5.2	1	2	0.127971
chr8	48710789	48735311	48723050	ENSG00000034239.10	-	protein_coding	KNOWN	EFCAB1	9	6	0.369609
chr8	48913916	48914380	48914148	ENSG00000233109.4	+	processed_pseudogene	KNOWN	RP11-22C8.1	1	1	0.215623
chr8	48917690	48921740	48919715	ENSG00000019549.8	-	protein_coding	KNOWN	SNAI2	2	4	0.215623
chr8	48938840	48938934	48938887	ENSG00000275096.1	+	miRNA	NOVEL	AC013701.1	1	1	0.144143
chr8	49054311	49076090	49065200	ENSG00000168333.13	+	protein_coding	KNOWN	C8orf22	4	5	-0.587784
chr8	49168539	49228925	49198732	ENSG00000253474.1	+	lincRNA	KNOWN	RP11-10H3.1	2	4	-0.606331
chr8	49330210	49330547	49330378	ENSG00000199640.1	+	misc_RNA	KNOWN	RN7SKP294	1	1	-0.258289
chr8	49352630	49352844	49352737	ENSG00000254268.1	-	processed_pseudogene	KNOWN	RFPL4AP7	1	1	-0.811046
chr8	49496763	49512180	49504471	ENSG00000253380.1	-	lincRNA	KNOWN	RP11-738G5.1	1	2	-0.485189
chr8	49536386	49554414	49545400	ENSG00000253206.1	-	lincRNA	KNOWN	RP11-738G5.2	1	4	-0.512115
chr8	49740216	49741321	49740768	ENSG00000253810.1	-	processed_pseudogene	KNOWN	PSAT1P1	1	1	-0.496752
chr8	49817586	49820944	49819265	ENSG00000253484.1	-	lincRNA	KNOWN	RP11-109P6.2	1	3	-0.407241
chr8	49906863	49907446	49907154	ENSG00000271148.1	-	lincRNA	KNOWN	RP11-401N18.1	1	1	-0.599255
chr8	49909789	50794118	50351953	ENSG00000147481.13	+	protein_coding	KNOWN	SNTG1	11	20	-0.462555
chr8	50381015	50382275	50381645	ENSG00000253849.1	+	sense_intronic	KNOWN	RP11-759A9.1	1	2	-0.177195
chr8	50490795	50491465	50491130	ENSG00000254392.1	+	processed_pseudogene	KNOWN	RP11-759A9.2	1	1	-0.610807
chr8	50762460	50762798	50762629	ENSG00000254358.1	-	processed_pseudogene	KNOWN	CYCSP22	1	1	-0.727927
chr8	50859530	50860062	50859796	ENSG00000253340.1	+	processed_pseudogene	KNOWN	RP11-139G7.1	1	1	-0.526579
chr8	51015021	51015165	51015093	ENSG00000201316.1	+	snoRNA	NOVEL	SNORA7	1	1	-0.875218
chr8	51257688	51321118	51289403	ENSG00000253664.1	+	antisense	KNOWN	RP11-401H2.1	1	2	-0.484519
chr8	51319578	51809445	51564511	ENSG00000147485.12	-	protein_coding	KNOWN	PXDNL	4	23	-0.361661
chr8	51435602	51436509	51436055	ENSG00000254025.1	+	processed_pseudogene	KNOWN	BRIX1P1	1	1	-0.204250
chr8	51721670	51722164	51721917	ENSG00000254225.1	-	processed_pseudogene	KNOWN	RP11-11C20.1	1	1	-0.312704
chr8	51810110	51810681	51810395	ENSG00000272076.1	-	lincRNA	KNOWN	RP11-11C20.3	1	1	-0.325566
chr8	51817575	51899186	51858380	ENSG00000168300.13	-	protein_coding	KNOWN	PCMTD1	8	7	-0.274040
chr8	51895957	51896374	51896165	ENSG00000253475.1	-	sense_intronic	KNOWN	RP11-110G21.2	1	2	-0.279456
chr8	51899325	51947173	51923249	ENSG00000228801.5	+	antisense	KNOWN	RP11-110G21.1	4	3	-0.116755
chr8	51950284	51950690	51950487	ENSG00000272024.1	+	lincRNA	KNOWN	RP11-546K22.3	1	1	-0.111292
chr8	51961458	52022974	51992216	ENSG00000253844.1	+	lincRNA	KNOWN	RP11-546K22.1	1	2	-0.155959
chr8	51996210	52008355	52002282	ENSG00000254136.1	-	lincRNA	KNOWN	RP11-546K22.2	1	2	-0.140669
chr8	52110839	52460959	52285899	ENSG00000147488.11	-	protein_coding	KNOWN	ST18	24	26	-0.331047
chr8	52150820	52154892	52152856	ENSG00000254314.1	+	antisense	KNOWN	RP11-26M5.3	1	2	-0.210571
chr8	52194362	52199580	52196971	ENSG00000253551.1	+	antisense	KNOWN	RP11-26M5.2	1	2	-0.054557
chr8	52294455	52301942	52298198	ENSG00000253924.1	+	lincRNA	KNOWN	RP11-1023P17.2	1	3	0.042804
chr8	52313154	52313500	52313327	ENSG00000240534.1	-	processed_pseudogene	KNOWN	RPL34P17	1	1	-0.519653
chr8	52534037	52565507	52549772	ENSG00000196711.8	-	protein_coding	KNOWN	FAM150A	2	5	-0.376122
chr8	52622456	52745843	52684149	ENSG00000023287.12	-	protein_coding	KNOWN	RB1CC1	10	24	-0.118987
chr8	52722903	52723141	52723022	ENSG00000271555.1	+	sense_intronic	KNOWN	CTD-3214K23.1	1	1	-0.109642
chr8	52891846	52891976	52891911	ENSG00000281352.1	-	miRNA	NOVEL	AC087348.1	1	1	-0.421586
chr8	52938431	52941117	52939774	ENSG00000183729.3	+	protein_coding	KNOWN	NPBWR1	1	1	-0.308888
chr8	52975111	52976116	52975613	ENSG00000248911.2	-	processed_pseudogene	KNOWN	RP11-182E14.1	1	1	-0.084506
chr8	52995348	52995458	52995403	ENSG00000265835.2	-	miRNA	NOVEL	AC009800.1	1	1	-0.205844
chr8	53037629	53037749	53037689	ENSG00000251871.1	-	miRNA	NOVEL	AC016113.1	1	1	-0.409202
chr8	53162339	53162987	53162663	ENSG00000250494.1	+	processed_pseudogene	KNOWN	RP11-162D9.1	1	2	-0.140051
chr8	53177571	53242683	53210127	ENSG00000254687.1	+	antisense	KNOWN	RP11-162D9.3	2	3	-0.277650
chr8	53225716	53251697	53238706	ENSG00000082556.10	-	protein_coding	KNOWN	OPRK1	6	5	-0.290325
chr8	53388701	53390872	53389786	ENSG00000260484.1	-	lincRNA	KNOWN	RP11-1081M5.2	1	1	-0.253430
chr8	53394215	53394795	53394505	ENSG00000274295.1	+	processed_pseudogene	KNOWN	RP11-1081M5.3	1	1	-0.460056
chr8	53395211	53395946	53395578	ENSG00000253369.1	-	lincRNA	KNOWN	RP11-1081M5.1	1	2	-0.460056
chr8	53515170	53515905	53515537	ENSG00000254204.1	+	lincRNA	KNOWN	RP11-400K9.3	1	2	-0.116250
chr8	53515171	53523931	53519551	ENSG00000237807.3	-	lincRNA	KNOWN	RP11-400K9.4	1	2	-0.116250
chr8	53532908	53533704	53533306	ENSG00000240919.1	+	processed_pseudogene	KNOWN	RP11-400K9.1	1	2	-0.074827
chr8	53537060	53540300	53538680	ENSG00000206144.5	+	processed_pseudogene	KNOWN	RP11-400K9.2	1	2	-0.074827
chr8	53712697	53712896	53712796	ENSG00000253668.1	+	processed_pseudogene	KNOWN	RP11-463C14.1	1	1	-0.275984
chr8	53715557	53843558	53779557	ENSG00000047249.16	-	protein_coding	KNOWN	ATP6V1H	20	14	-0.165122
chr8	53851808	53959303	53905555	ENSG00000147509.13	+	protein_coding	KNOWN	RGS20	10	6	0.250284
chr8	53876150	53876649	53876399	ENSG00000272457.1	-	antisense	KNOWN	RP11-1070A24.2	1	1	0.245537
chr8	53887008	53887244	53887126	ENSG00000244159.1	-	processed_pseudogene	KNOWN	RP11-1070A24.1	1	1	0.245537
chr8	53914719	53914824	53914771	ENSG00000200528.1	+	snRNA	KNOWN	RNU6-1331P	1	1	0.254930
chr8	53966552	54022529	53994540	ENSG00000187735.12	-	protein_coding	KNOWN	TCEA1	11	12	0.197970
chr8	53971231	53974210	53972720	ENSG00000253667.2	+	processed_pseudogene	KNOWN	RP11-30L15.4	1	3	0.263758
chr8	53993605	53994438	53994021	ENSG00000280473.1	+	protein_coding	KNOWN	AC100821.2	1	3	0.123186
chr8	54042989	54045629	54044309	ENSG00000260955.2	-	lincRNA	KNOWN	RP11-30L15.6	1	3	0.296191
chr8	54046367	54102017	54074192	ENSG00000120992.17	-	protein_coding	KNOWN	LYPLA1	15	9	0.143314
chr8	54066681	54066781	54066731	ENSG00000276621.1	+	miRNA	NOVEL	AC100821.1	1	1	0.194242
chr8	54073114	54073566	54073340	ENSG00000254274.1	+	processed_pseudogene	KNOWN	TDGF1P5	1	1	0.142618
chr8	54130582	54130860	54130721	ENSG00000276353.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.007544
chr8	54135210	54147901	54141555	ENSG00000137547.8	+	protein_coding	KNOWN	MRPL15	3	5	-0.007544
chr8	54152807	54152882	54152844	ENSG00000251835.1	-	snRNA	KNOWN	RNU6ATAC32P	1	1	0.035089
chr8	54191582	54192035	54191808	ENSG00000270980.1	-	processed_pseudogene	KNOWN	RP11-626A5.2	1	1	-0.289643
chr8	54247633	54247906	54247769	ENSG00000253840.1	+	processed_pseudogene	KNOWN	RP11-767C6.1	1	1	-0.026886
chr8	54330687	54330895	54330791	ENSG00000199212.1	+	snoRNA	KNOWN	RNU105C	1	1	-0.158816
chr8	54354168	54355118	54354643	ENSG00000276605.1	+	processed_pseudogene	KNOWN	RP11-793H4.1	1	1	0.100554
chr8	54420468	54420725	54420596	ENSG00000244107.3	+	misc_RNA	KNOWN	RN7SL250P	1	1	-0.152546
chr8	54457935	54460888	54459411	ENSG00000164736.5	+	protein_coding	KNOWN	SOX17	1	2	0.055923
chr8	54467208	54470609	54468908	ENSG00000274310.1	+	unprocessed_pseudogene	KNOWN	RP11-53M11.5	1	2	0.053861
chr8	54479597	54479963	54479780	ENSG00000270275.1	-	processed_pseudogene	KNOWN	TRMT112P7	1	1	0.044426
chr8	54522799	54523297	54523048	ENSG00000226098.4	-	processed_pseudogene	KNOWN	SEC11B	1	1	-0.281687
chr8	54554361	54561927	54558144	ENSG00000254142.2	+	lincRNA	KNOWN	RP11-53M11.3	4	4	-0.320391
chr8	54616067	54630834	54623450	ENSG00000104237.6	+	protein_coding	KNOWN	RP1	1	4	-0.308736
chr8	54648993	54869903	54759448	ENSG00000254608.1	+	unprocessed_pseudogene	KNOWN	RP11-56A10.1	1	9	-0.353149
chr8	54696398	54697127	54696762	ENSG00000253114.2	+	processed_pseudogene	KNOWN	RP11-550I15.1	1	1	-0.195448
chr8	55102389	55542054	55322221	ENSG00000206579.8	+	protein_coding	KNOWN	XKR4	3	4	-0.282362
chr8	55135203	55142358	55138780	ENSG00000253976.1	-	lincRNA	KNOWN	RP11-386G21.1	1	3	-0.056531
chr8	55161483	55164727	55163105	ENSG00000253857.1	+	lincRNA	KNOWN	RP11-386G21.2	2	2	-0.644974
chr8	55449509	55455139	55452324	ENSG00000248522.1	-	processed_pseudogene	KNOWN	SBF1P1	1	1	-0.113053
chr8	55517240	55520977	55519108	ENSG00000254357.1	-	antisense	KNOWN	RP11-628E19.2	1	2	-0.016785
chr8	55677233	55677324	55677278	ENSG00000221589.1	-	miRNA	NOVEL	AC100817.1	1	1	-0.089615
chr8	55696424	55773407	55734915	ENSG00000167904.14	-	protein_coding	KNOWN	TMEM68	19	8	-0.172660
chr8	55745232	55745342	55745287	ENSG00000222955.1	+	rRNA	KNOWN	RNA5SP265	1	1	-0.188686
chr8	55773142	55825448	55799295	ENSG00000137574.10	+	protein_coding	KNOWN	TGS1	3	13	0.088683
chr8	55879813	56014168	55946990	ENSG00000254087.7	+	protein_coding	KNOWN	LYN	4	13	0.299202
chr8	55893595	55895739	55894667	ENSG00000254325.2	+	sense_intronic	KNOWN	RP11-318K15.2	1	2	0.321238
chr8	55902723	55902855	55902789	ENSG00000199405.1	-	snoRNA	NOVEL	SNORA1	1	1	0.321238
chr8	55980240	55980540	55980390	ENSG00000240905.3	-	misc_RNA	KNOWN	RN7SL798P	1	1	0.211662
chr8	56022019	56022313	56022166	ENSG00000241997.3	-	misc_RNA	KNOWN	RN7SL323P	1	1	0.015371
chr8	56042371	56042458	56042414	ENSG00000280728.1	+	miRNA	NOVEL	AC046176.1	1	1	-0.119115
chr8	56050038	56051207	56050622	ENSG00000236814.1	-	processed_pseudogene	KNOWN	RP11-446E9.1	1	1	0.135581
chr8	56067295	56074581	56070938	ENSG00000008988.9	-	protein_coding	KNOWN	RPS20	12	6	0.216189
chr8	56073835	56073901	56073868	ENSG00000238650.1	-	snoRNA	KNOWN	SNORD54	1	1	0.263758
chr8	56074592	56075274	56074933	ENSG00000253603.1	+	antisense	KNOWN	CTA-397H3.3	1	2	0.263758
chr8	56101199	56102267	56101733	ENSG00000248578.1	-	processed_pseudogene	KNOWN	NPM1P21	1	2	0.158718
chr8	56112942	56113982	56113462	ENSG00000172680.1	-	protein_coding	KNOWN	MOS	1	1	-0.063659
chr8	56121242	56121352	56121297	ENSG00000221093.1	-	snoRNA	NOVEL	SNORA3	1	1	-0.063659
chr8	56160904	56211324	56186114	ENSG00000181690.7	-	protein_coding	KNOWN	PLAG1	5	5	-0.127114
chr8	56211686	56218798	56215242	ENSG00000170791.17	+	protein_coding	KNOWN	CHCHD7	18	6	-0.159547
chr8	56222688	56223173	56222930	ENSG00000272343.1	+	lincRNA	KNOWN	RP11-140I16.3	1	1	-0.159547
chr8	56252960	56253372	56253166	ENSG00000254216.1	-	processed_pseudogene	KNOWN	RP11-140I16.2	1	2	-0.098231
chr8	56300010	56320776	56310393	ENSG00000170786.12	-	protein_coding	KNOWN	SDR16C5	3	8	-0.320450
chr8	56373064	56395365	56384214	ENSG00000253542.7	-	unitary_pseudogene	KNOWN	SDR16C6P	2	6	-0.348926
chr8	56436674	56446734	56441704	ENSG00000181195.10	-	protein_coding	KNOWN	PENK	9	4	-0.196729
chr8	56445807	56552067	56498937	ENSG00000254254.5	+	antisense	KNOWN	RP11-17A4.2	2	4	-0.079308
chr8	56476826	56477987	56477406	ENSG00000253541.1	-	processed_pseudogene	KNOWN	SEPT10P1	1	1	-0.304767
chr8	56496246	56559823	56528034	ENSG00000246430.6	-	lincRNA	KNOWN	LINC00968	7	3	-0.030465
chr8	56536758	56540497	56538627	ENSG00000253139.1	-	lincRNA	KNOWN	RP11-17A4.3	2	3	0.099334
chr8	56588385	56588787	56588586	ENSG00000241431.1	+	transcribed_processed_pseudogene	KNOWN	RPL37P6	2	1	-0.138621
chr8	56639901	56656465	56648183	ENSG00000254055.1	-	lincRNA	KNOWN	RP11-17A4.4	1	4	-0.213194
chr8	56776283	56776874	56776578	ENSG00000270328.1	+	processed_pseudogene	KNOWN	RP11-33E15.1	1	1	-0.480371
chr8	56917084	56917190	56917137	ENSG00000206975.1	+	snRNA	KNOWN	RNU6-13P	1	1	-0.102581
chr8	56957933	56993844	56975888	ENSG00000104331.8	-	protein_coding	KNOWN	IMPAD1	3	5	-0.052178
chr8	57126655	57126762	57126708	ENSG00000222205.1	-	rRNA	KNOWN	RNA5SP266	1	1	-0.691021
chr8	57142689	57240298	57191493	ENSG00000253301.5	+	lincRNA	KNOWN	LINC01606	9	8	-0.299041
chr8	57183634	57183720	57183677	ENSG00000220984.1	+	miRNA	NOVEL	AC025674.1	1	1	-0.223510
chr8	57240057	57240541	57240299	ENSG00000251142.1	+	processed_pseudogene	KNOWN	RP11-513O17.1	1	2	-0.606627
chr8	57261226	57266613	57263919	ENSG00000253614.1	+	lincRNA	KNOWN	RP11-513O17.3	1	3	-0.027918
chr8	57279543	57284731	57282137	ENSG00000215117.5	+	lincRNA	KNOWN	LINC00588	1	4	-0.084506
chr8	57289552	57289649	57289600	ENSG00000202265.1	+	snRNA	KNOWN	RNU6-596P	1	1	-0.084506
chr8	57343787	57364857	57354322	ENSG00000253871.1	+	lincRNA	KNOWN	RP11-756K15.2	2	9	-0.006765
chr8	57392546	57392882	57392714	ENSG00000243050.1	+	processed_pseudogene	KNOWN	RPL30P10	1	1	-0.519236
chr8	57492884	57591559	57542221	ENSG00000253821.1	+	lincRNA	KNOWN	RP11-246K15.1	2	2	-0.270344
chr8	57594166	57805029	57699597	ENSG00000253322.1	-	lincRNA	KNOWN	RP11-388G22.1	1	3	-0.360727
chr8	57746149	57750199	57748174	ENSG00000254139.1	+	lincRNA	KNOWN	CTD-2339F6.1	1	2	-0.538283
chr8	57889576	57890809	57890192	ENSG00000253376.1	-	lincRNA	KNOWN	RP11-44D19.1	1	2	-0.379515
chr8	57978358	57984126	57981242	ENSG00000205293.3	+	lincRNA	KNOWN	LINC01602	1	3	0.007600
chr8	57994509	58204279	58099394	ENSG00000169122.11	+	protein_coding	KNOWN	FAM110B	7	5	0.043675
chr8	58031334	58032682	58032008	ENSG00000253523.1	-	lincRNA	KNOWN	RP11-1112C15.2	1	2	-0.079775
chr8	58091442	58106294	58098868	ENSG00000253116.1	-	lincRNA	KNOWN	RP11-648L3.2	1	4	0.150206
chr8	58113189	58113622	58113405	ENSG00000242595.1	-	processed_pseudogene	KNOWN	RP11-648L3.1	1	1	-0.022829
chr8	58255771	58272119	58263945	ENSG00000253281.6	-	processed_transcript	KNOWN	RP11-716D16.1	4	8	-0.315345
chr8	58411264	58451501	58431382	ENSG00000215114.7	+	protein_coding	KNOWN	UBXN2B	5	9	-0.163949
chr8	58424588	58426685	58425636	ENSG00000250031.1	-	processed_pseudogene	KNOWN	RP11-114M5.1	1	2	-0.396895
chr8	58490178	58500236	58495207	ENSG00000167910.3	-	protein_coding	KNOWN	CYP7A1	1	6	-0.294425
chr8	58503588	58504068	58503828	ENSG00000254103.1	+	processed_pseudogene	KNOWN	RP11-114M5.3	1	1	-0.294425
chr8	58552924	58582860	58567892	ENSG00000137575.11	+	protein_coding	KNOWN	SDCBP	13	10	-0.324509
chr8	58583504	58659844	58621674	ENSG00000035681.7	-	protein_coding	KNOWN	NSMAF	17	31	0.043033
chr8	58588420	58588764	58588592	ENSG00000242970.2	-	processed_pseudogene	KNOWN	AC068522.4	1	1	-0.242798
chr8	58805418	59119208	58962313	ENSG00000198846.5	-	protein_coding	KNOWN	TOX	1	9	-0.108283
chr8	58814412	58814552	58814482	ENSG00000201231.1	-	snRNA	KNOWN	RNU4-50P	1	1	-0.355467
chr8	58991720	58992938	58992329	ENSG00000254048.1	-	sense_intronic	KNOWN	RP11-328K2.1	1	2	-0.141068
chr8	59119040	59121346	59120193	ENSG00000167912.5	+	antisense	KNOWN	RP11-25K19.1	3	2	-0.099374
chr8	59137372	59137502	59137437	ENSG00000206853.1	-	snoRNA	NOVEL	SNORA51	1	1	-0.176497
chr8	59455885	59456010	59455947	ENSG00000201763.1	+	rRNA	KNOWN	RNA5SP267	1	1	-0.044581
chr8	59557528	59557855	59557691	ENSG00000254150.1	-	processed_pseudogene	KNOWN	RP11-379I19.2	1	1	-0.092040
chr8	59561327	59593701	59577514	ENSG00000253260.1	-	lincRNA	KNOWN	RP11-379I19.1	1	2	-0.446490
chr8	59601378	59613775	59607576	ENSG00000253879.1	+	lincRNA	KNOWN	RP11-379I19.3	2	3	-0.227890
chr8	59760047	59760263	59760155	ENSG00000253413.1	+	processed_pseudogene	KNOWN	RP11-960H2.2	1	1	-0.096212
chr8	59821124	59821433	59821278	ENSG00000253723.1	+	processed_pseudogene	KNOWN	RP11-960H2.1	1	1	-0.210192
chr8	59893856	59893942	59893899	ENSG00000278428.1	-	unprocessed_pseudogene	KNOWN	RP11-88H1.1	1	1	-0.211558
chr8	60049587	60074715	60062151	ENSG00000254775.1	+	lincRNA	KNOWN	RP11-27P7.1	1	3	-0.105520
chr8	60141821	60142142	60141981	ENSG00000254954.1	+	processed_pseudogene	KNOWN	SLC2A13P1	1	1	-0.224036
chr8	60187347	60281412	60234379	ENSG00000178538.9	-	protein_coding	KNOWN	CA8	4	9	-0.289048
chr8	60384588	60516795	60450691	ENSG00000251396.6	-	lincRNA	KNOWN	LINC01301	7	4	-0.091292
chr8	60387262	60387995	60387628	ENSG00000226301.3	+	processed_pseudogene	KNOWN	PDCL3P1	1	1	-0.589186
chr8	60516857	60623627	60570242	ENSG00000104388.14	+	protein_coding	KNOWN	RAB2A	12	9	-0.004442
chr8	60551957	60553036	60552496	ENSG00000255321.1	-	antisense	KNOWN	RP11-91I20.4	1	2	0.173063
chr8	60631509	60636271	60633890	ENSG00000228862.3	-	lincRNA	KNOWN	RP11-91I20.3	2	2	-0.171043
chr8	60652502	60653561	60653031	ENSG00000254869.1	-	lincRNA	KNOWN	RP11-91I20.2	1	3	0.125939
chr8	60660820	60664530	60662675	ENSG00000255289.1	+	lincRNA	KNOWN	RP11-91I20.1	1	2	0.125939
chr8	60678778	60868028	60773403	ENSG00000171316.11	+	protein_coding	KNOWN	CHD7	12	38	-0.368824
chr8	60808735	60809606	60809170	ENSG00000254432.1	-	antisense	KNOWN	RP11-33I11.2	1	2	-0.410509
chr8	60906059	60906452	60906255	ENSG00000271377.1	+	processed_pseudogene	KNOWN	RP11-33I11.3	1	1	-0.370351
chr8	60910053	60966557	60938305	ENSG00000254777.5	+	lincRNA	KNOWN	AC022182.1	3	5	-0.115243
chr8	60937705	60939871	60938788	ENSG00000255397.1	-	processed_pseudogene	KNOWN	AC022182.2	1	1	-0.136485
chr8	60965802	60967775	60966788	ENSG00000254802.1	-	lincRNA	KNOWN	AC022182.3	1	2	-0.175230
chr8	61057158	61501645	61279401	ENSG00000177182.10	+	protein_coding	KNOWN	CLVS1	11	7	-0.259720
chr8	61202350	61203220	61202785	ENSG00000213881.3	+	processed_pseudogene	KNOWN	NPM1P6	1	1	-0.398334
chr8	61264624	61292039	61278331	ENSG00000254222.1	-	antisense	KNOWN	RP11-787D18.2	1	3	-0.184467
chr8	61300164	61301069	61300616	ENSG00000253711.1	-	antisense	KNOWN	RP11-787D18.1	2	2	-0.349198
chr8	61500556	61714640	61607598	ENSG00000198363.15	-	protein_coding	KNOWN	ASPH	30	25	-0.025397
chr8	61578220	61579668	61578944	ENSG00000254285.3	+	processed_pseudogene	KNOWN	KRT8P3	1	1	-0.186473
chr8	61631680	61632012	61631846	ENSG00000222898.1	-	misc_RNA	KNOWN	RN7SKP97	1	1	0.163250
chr8	61714788	61714859	61714823	ENSG00000264408.1	+	miRNA	KNOWN	MIR4470	1	1	0.007103
chr8	61759094	61765969	61762531	ENSG00000251127.2	-	lincRNA	KNOWN	RP11-280G9.1	1	2	-0.198401
chr8	61785047	61944180	61864613	ENSG00000254119.5	+	lincRNA	KNOWN	RP11-705O24.1	11	4	-0.396816
chr8	61821481	61825252	61823366	ENSG00000253834.1	-	lincRNA	KNOWN	RP11-705O24.3	1	2	-0.231898
chr8	61889839	61894206	61892022	ENSG00000254120.1	+	lincRNA	KNOWN	RP11-705O24.2	1	4	-0.543636
chr8	61909984	61910802	61910393	ENSG00000253544.1	-	processed_pseudogene	KNOWN	C1GALT1P3	1	1	-0.700576
chr8	62110524	62119898	62115211	ENSG00000253789.1	+	transcribed_processed_pseudogene	KNOWN	NARSP2	2	3	-0.592146
chr8	62143311	62144769	62144040	ENSG00000237810.3	-	processed_pseudogene	KNOWN	CTD-2571E19.3	1	1	-0.798035
chr8	62248591	62999652	62624121	ENSG00000185942.11	+	protein_coding	KNOWN	NKAIN3	4	8	-0.456239
chr8	62473217	62474269	62473743	ENSG00000254050.1	-	antisense	KNOWN	RP11-577N1.1	1	2	-0.364724
chr8	62482198	62483811	62483004	ENSG00000253975.1	-	processed_pseudogene	KNOWN	RP11-577N1.2	1	1	-0.364724
chr8	62855068	62857134	62856101	ENSG00000253517.1	-	processed_pseudogene	KNOWN	XRCC6P4	1	1	-0.378087
chr8	62863082	62864181	62863631	ENSG00000253431.1	-	processed_pseudogene	KNOWN	SRPK2P	1	1	-0.378087
chr8	62977861	62984900	62981380	ENSG00000274956.2	+	lincRNA	KNOWN	UG0898H09	2	1	-0.240278
chr8	63013068	63014681	63013874	ENSG00000240915.2	+	antisense	KNOWN	RP11-659E9.2	1	2	-0.262117
chr8	63015079	63039171	63027125	ENSG00000137563.11	-	protein_coding	KNOWN	GGH	8	9	-0.290693
chr8	63024372	63025294	63024833	ENSG00000253121.1	+	antisense	KNOWN	RP11-659E9.4	1	2	-0.262117
chr8	63048553	63086053	63067303	ENSG00000137561.4	-	protein_coding	KNOWN	TTPA	2	5	-0.303552
chr8	63136223	63138084	63137153	ENSG00000253555.1	-	unprocessed_pseudogene	KNOWN	RP11-16E18.1	1	2	-0.286520
chr8	63167725	63168442	63168083	ENSG00000270673.1	-	lincRNA	KNOWN	YTHDF3-AS1	1	1	0.017610
chr8	63168553	63212786	63190669	ENSG00000185728.16	+	protein_coding	KNOWN	YTHDF3	16	6	0.064098
chr8	63215981	63218034	63217007	ENSG00000261542.1	+	lincRNA	KNOWN	RP11-16E18.3	1	1	-0.223510
chr8	63234634	63234911	63234772	ENSG00000241964.3	-	misc_RNA	KNOWN	RN7SL135P	1	1	-0.135419
chr8	63384839	63470205	63427522	ENSG00000253205.5	-	lincRNA	KNOWN	CTD-3046C4.1	6	4	-0.505065
chr8	63409064	63409457	63409260	ENSG00000215096.3	+	processed_pseudogene	KNOWN	IFITM8P	1	1	-0.682795
chr8	63465849	63475482	63470665	ENSG00000253894.1	+	lincRNA	KNOWN	RP11-45K10.2	3	4	-0.478852
chr8	63586000	63589408	63587704	ENSG00000253583.1	+	lincRNA	KNOWN	RP11-573J24.1	1	3	-0.263489
chr8	63609354	63609600	63609477	ENSG00000252358.1	-	misc_RNA	KNOWN	RN7SKP135	1	1	-0.571645
chr8	63687179	64368558	64027868	ENSG00000253554.5	-	antisense	KNOWN	RP11-32K4.1	4	6	-0.500658
chr8	63704756	63751677	63728216	ENSG00000253762.1	+	lincRNA	KNOWN	RP11-579E24.2	1	4	-0.626240
chr8	63769430	63785501	63777465	ENSG00000253734.1	+	lincRNA	KNOWN	LINC01289	1	3	-0.364133
chr8	64331927	64332152	64332039	ENSG00000253231.1	+	processed_pseudogene	KNOWN	COX6CP8	1	1	-0.329648
chr8	64373328	64383787	64378557	ENSG00000254377.5	+	lincRNA	KNOWN	MIR124-2HG	5	3	-0.176298
chr8	64379149	64379257	64379203	ENSG00000207816.1	+	miRNA	KNOWN	MIR124-2	1	1	-0.176298
chr8	64554236	64554475	64554355	ENSG00000253750.1	-	processed_pseudogene	KNOWN	RP11-21C4.4	1	1	-0.319906
chr8	64570913	64571332	64571122	ENSG00000253800.1	-	processed_pseudogene	KNOWN	RP11-21C4.5	1	1	-0.227765
chr8	64574306	64581888	64578097	ENSG00000254102.1	-	antisense	KNOWN	RP11-21C4.1	2	2	-0.227765
chr8	64580367	64583628	64581997	ENSG00000180828.2	+	protein_coding	KNOWN	BHLHE22	1	1	-0.227765
chr8	64587763	64798761	64693262	ENSG00000172817.3	-	protein_coding	KNOWN	CYP7B1	2	6	-0.477255
chr8	64703774	64734459	64719116	ENSG00000254330.1	-	sense_intronic	KNOWN	RP11-1D12.1	1	5	-0.496998
chr8	64801236	64817573	64809404	ENSG00000254006.5	-	lincRNA	KNOWN	RP11-1D12.2	2	5	-0.426607
chr8	64973488	64973848	64973668	ENSG00000253493.1	-	processed_pseudogene	KNOWN	RP11-89A16.1	1	1	-0.488383
chr8	65155407	65155778	65155592	ENSG00000239261.1	+	processed_pseudogene	KNOWN	RPL31P41	1	1	-0.479550
chr8	65161145	65180341	65170743	ENSG00000280725.1	-	lincRNA	KNOWN	LINC00251	1	4	-0.386547
chr8	65377592	65378111	65377851	ENSG00000213873.4	+	processed_pseudogene	KNOWN	RP11-678D18.1	1	1	-0.308546
chr8	65527008	65562780	65544894	ENSG00000254081.1	-	lincRNA	KNOWN	LINC01299	1	5	-0.455923
chr8	65591850	65592472	65592161	ENSG00000272010.1	-	lincRNA	KNOWN	CTD-3025N20.3	1	1	0.007103
chr8	65592731	65592820	65592775	ENSG00000200714.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.007103
chr8	65602456	65634217	65618336	ENSG00000104442.9	-	protein_coding	KNOWN	ARMC1	6	7	-0.010698
chr8	65644734	65771261	65707997	ENSG00000066855.15	+	protein_coding	KNOWN	MTFR1	15	8	0.070006
chr8	65714334	65714778	65714556	ENSG00000272155.1	-	antisense	KNOWN	RP11-707M3.3	1	1	0.038221
chr8	65717510	65842322	65779916	ENSG00000205268.10	-	protein_coding	KNOWN	PDE7A	8	13	-0.050345
chr8	65842752	65843331	65843041	ENSG00000272192.1	+	lincRNA	KNOWN	CTD-2532N20.1	1	1	-0.064410
chr8	66021560	66100526	66061043	ENSG00000147570.9	+	protein_coding	KNOWN	DNAJC5B	4	7	-0.362203
chr8	66112667	66115207	66113937	ENSG00000253190.3	+	lincRNA	KNOWN	AC084082.3	2	2	0.034111
chr8	66126896	66175487	66151191	ENSG00000147573.16	+	protein_coding	KNOWN	TRIM55	5	11	0.044789
chr8	66176382	66178725	66177553	ENSG00000147571.4	-	protein_coding	KNOWN	CRH	1	2	0.091992
chr8	66192093	66197315	66194704	ENSG00000253138.5	+	lincRNA	KNOWN	LINC00967	4	4	-0.345414
chr8	66419589	66428977	66424283	ENSG00000246145.1	-	lincRNA	KNOWN	RRS1-AS1	1	3	-0.240278
chr8	66429028	66430733	66429880	ENSG00000179041.3	+	protein_coding	KNOWN	RRS1	1	1	0.029409
chr8	66430185	66471601	66450893	ENSG00000147576.15	+	protein_coding	KNOWN	ADHFE1	18	15	0.262223
chr8	66460003	66518524	66489263	ENSG00000169085.11	+	protein_coding	KNOWN	C8orf46	15	7	0.357846
chr8	66480648	66481486	66481067	ENSG00000253623.1	+	processed_pseudogene	KNOWN	RP11-346I3.2	1	1	0.288531
chr8	66501205	66501311	66501258	ENSG00000206949.1	-	snRNA	KNOWN	RNU6-1324P	1	1	0.388523
chr8	66562175	66614247	66588211	ENSG00000185697.16	-	protein_coding	KNOWN	MYBL1	6	16	0.044240
chr8	66628487	66667217	66647852	ENSG00000175073.7	-	protein_coding	KNOWN	VCPIP1	1	3	0.091724
chr8	66653469	66653576	66653522	ENSG00000201365.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.006412
chr8	66667596	66860472	66764034	ENSG00000270024.5	+	protein_coding	KNOWN	C8orf44-SGK3	2	19	-0.041627
chr8	66667615	66685564	66676589	ENSG00000213865.7	+	protein_coding	KNOWN	C8orf44	5	4	0.235904
chr8	66674499	66675916	66675207	ENSG00000278888.1	-	protein_coding	KNOWN	AC090154.1	1	3	0.273018
chr8	66712418	66862022	66787220	ENSG00000104205.12	+	protein_coding	KNOWN	SGK3	14	18	-0.087225
chr8	66767400	66768005	66767702	ENSG00000213005.3	-	processed_pseudogene	KNOWN	PTTG3P	1	1	0.158081
chr8	66870749	66922048	66896398	ENSG00000178460.17	+	protein_coding	KNOWN	MCMDC2	7	15	-0.091040
chr8	66921684	66926398	66924041	ENSG00000245910.8	-	processed_transcript	KNOWN	SNHG6	5	4	-0.129136
chr8	66922467	66922555	66922511	ENSG00000254341.2	-	snoRNA	KNOWN	SNORD87	1	1	-0.129136
chr8	66946501	66962590	66954545	ENSG00000261787.1	-	protein_coding	KNOWN	TCF24	2	4	-0.079621
chr8	66964099	67056604	67010351	ENSG00000178125.14	-	protein_coding	KNOWN	PPP1R42	13	9	-0.136019
chr8	66984135	66986187	66985161	ENSG00000253223.1	-	processed_pseudogene	KNOWN	RP11-409C19.2	1	1	-0.208182
chr8	67043079	67083783	67063431	ENSG00000121022.13	-	protein_coding	KNOWN	COPS5	13	10	-0.060103
chr8	67058906	67059003	67058954	ENSG00000266491.1	+	miRNA	NOVEL	AC109335.1	1	1	-0.109215
chr8	67062426	67196263	67129344	ENSG00000104218.14	+	protein_coding	KNOWN	CSPP1	7	29	-0.055419
chr8	67099302	67099425	67099363	ENSG00000252637.1	+	rRNA	KNOWN	RNA5SP268	1	1	-0.060960
chr8	67133554	67135911	67134732	ENSG00000250869.2	-	unprocessed_pseudogene	KNOWN	RP11-453N18.1	1	3	-0.201999
chr8	67173511	67343677	67258594	ENSG00000066777.8	-	protein_coding	KNOWN	ARFGEF1	8	39	-0.122634
chr8	67343975	67345087	67344531	ENSG00000271966.1	+	lincRNA	KNOWN	RP11-7F18.2	1	1	0.066606
chr8	67406515	67407072	67406793	ENSG00000241961.1	+	processed_pseudogene	KNOWN	RP11-7F18.1	1	1	-0.119512
chr8	67422125	67746345	67584235	ENSG00000165078.11	-	protein_coding	KNOWN	CPA6	3	11	-0.298283
chr8	67569416	67570078	67569747	ENSG00000254253.1	+	processed_pseudogene	KNOWN	RP11-343B22.2	1	1	-0.106105
chr8	67732587	67735665	67734126	ENSG00000255130.1	+	antisense	KNOWN	RP11-396J6.1	1	2	-0.320556
chr8	67849044	67849338	67849191	ENSG00000255531.1	+	processed_pseudogene	KNOWN	NDUFS5P6	1	1	-0.256736
chr8	67952118	68237030	68094574	ENSG00000046889.18	+	protein_coding	KNOWN	PREX2	5	40	-0.445915
chr8	68082204	68095081	68088642	ENSG00000255206.1	-	antisense	KNOWN	RP11-403D15.2	1	2	-0.558003
chr8	68176768	68177221	68176994	ENSG00000254051.1	+	processed_pseudogene	KNOWN	RP11-403D15.1	1	1	-0.831877
chr8	68223318	68223402	68223360	ENSG00000252210.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.250695
chr8	68293446	68293818	68293632	ENSG00000253964.1	-	processed_pseudogene	KNOWN	RPL31P40	1	1	-0.125600
chr8	68303468	68331491	68317479	ENSG00000248801.6	-	antisense	KNOWN	C8orf34-AS1	2	3	-0.169626
chr8	68330722	68819022	68574872	ENSG00000165084.15	+	protein_coding	KNOWN	C8orf34	8	14	-0.293995
chr8	68525517	68525906	68525711	ENSG00000236191.3	-	processed_pseudogene	KNOWN	RPS15AP25	1	1	-0.055162
chr8	68695643	68695779	68695711	ENSG00000239184.1	+	rRNA	KNOWN	RNA5SP269	1	1	-0.284157
chr8	68848742	68852763	68850752	ENSG00000254337.1	-	lincRNA	KNOWN	RP11-865I6.2	1	3	-0.034466
chr8	68911803	69104190	69007996	ENSG00000253658.5	-	lincRNA	KNOWN	LINC01592	4	5	-0.139287
chr8	69110513	69110574	69110543	ENSG00000238808.1	-	snRNA	KNOWN	RNU7-102P	1	1	0.082342
chr8	69129598	69130345	69129971	ENSG00000254332.1	+	processed_pseudogene	KNOWN	GS1-44D20.1	1	1	-0.003570
chr8	69175579	69178189	69176884	ENSG00000253373.1	-	lincRNA	KNOWN	RP11-21C17.1	1	3	-0.137142
chr8	69425035	69448244	69436639	ENSG00000253479.5	-	lincRNA	KNOWN	LINC01603	2	4	-0.156120
chr8	69446057	69446260	69446158	ENSG00000253216.1	+	processed_pseudogene	KNOWN	RP11-744J10.2	1	1	-0.136036
chr8	69466624	69660915	69563769	ENSG00000137573.13	+	protein_coding	KNOWN	SULF1	23	23	0.091539
chr8	69667047	69835064	69751055	ENSG00000137571.10	-	protein_coding	KNOWN	SLCO5A1	8	10	-0.156350
chr8	69700224	69700495	69700359	ENSG00000222889.1	+	misc_RNA	KNOWN	RN7SKP29	1	1	0.279619
chr8	69713390	69719722	69716556	ENSG00000254557.1	+	antisense	KNOWN	RP11-102F4.2	1	3	-0.349714
chr8	69794062	69794734	69794398	ENSG00000271113.1	+	processed_pseudogene	KNOWN	RP11-159H10.4	1	1	-0.355467
chr8	69834111	69854971	69844541	ENSG00000246528.3	+	antisense	KNOWN	RP11-159H10.3	4	3	-0.138960
chr8	69851148	69851436	69851292	ENSG00000277740.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.111100
chr8	69859264	69860540	69859902	ENSG00000255107.1	-	processed_pseudogene	KNOWN	RP11-159H10.1	1	1	-0.111100
chr8	69922751	69923047	69922899	ENSG00000239580.3	-	misc_RNA	KNOWN	RN7SL675P	1	1	-0.001667
chr8	69929905	69930022	69929963	ENSG00000223293.1	+	rRNA	KNOWN	RNA5SP270	1	1	-0.014697
chr8	69938168	69938400	69938284	ENSG00000280393.1	+	TEC	KNOWN	RP11-449M6.3	1	1	-0.067949
chr8	69942948	69944648	69943798	ENSG00000247570.2	+	processed_pseudogene	KNOWN	SDCBPP2	1	3	-0.067949
chr8	69987415	69987697	69987556	ENSG00000253721.1	-	processed_pseudogene	KNOWN	SUMO2P20	1	1	0.091992
chr8	70051651	70071693	70061672	ENSG00000147596.3	-	protein_coding	KNOWN	PRDM14	2	8	-0.096612
chr8	70077906	70078032	70077969	ENSG00000212473.1	-	snRNA	KNOWN	RNU1-101P	1	1	0.400114
chr8	70103798	70104179	70103988	ENSG00000253173.3	-	processed_pseudogene	KNOWN	RP11-152C15.1	1	1	0.211139
chr8	70109762	70403805	70256783	ENSG00000140396.12	-	protein_coding	KNOWN	NCOA2	8	23	-0.070192
chr8	70273369	70273837	70273603	ENSG00000213003.3	+	processed_pseudogene	KNOWN	BTF3P12	1	1	-0.277582
chr8	70357347	70357448	70357397	ENSG00000207036.1	+	misc_RNA	KNOWN	RNY3P14	1	1	-0.112367
chr8	70424125	70424576	70424350	ENSG00000241204.1	-	processed_pseudogene	KNOWN	RP11-333A23.1	1	1	-0.268052
chr8	70471112	70480623	70475867	ENSG00000253143.3	-	lincRNA	KNOWN	RP11-333A23.3	1	2	0.301915
chr8	70471134	70485687	70478410	ENSG00000253967.1	+	lincRNA	KNOWN	RP11-333A23.4	1	4	0.301915
chr8	70480192	70480487	70480339	ENSG00000275128.1	-	misc_RNA	KNOWN	RN7SL203P	1	1	0.301915
chr8	70506251	70506818	70506534	ENSG00000241105.1	-	processed_pseudogene	KNOWN	RP11-333A23.2	1	1	-0.231898
chr8	70573442	70608387	70590914	ENSG00000067167.7	-	protein_coding	KNOWN	TRAM1	5	11	-0.216902
chr8	70608577	70663279	70635928	ENSG00000246366.6	+	antisense	KNOWN	LACTB2-AS1	5	4	0.135741
chr8	70635318	70669174	70652246	ENSG00000147592.8	-	protein_coding	KNOWN	LACTB2	4	8	-0.063172
chr8	70654578	70654883	70654730	ENSG00000243532.3	-	misc_RNA	KNOWN	RN7SL19P	1	1	-0.077933
chr8	70669365	70790371	70729868	ENSG00000221947.7	+	protein_coding	KNOWN	XKR9	5	6	-0.222910
chr8	70780914	70781008	70780961	ENSG00000223220.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.414070
chr8	71155457	71204223	71179840	ENSG00000254031.5	+	antisense	KNOWN	RP11-326E22.1	2	6	-0.270396
chr8	71197433	71362232	71279832	ENSG00000104313.17	-	protein_coding	KNOWN	EYA1	11	18	-0.452034
chr8	71403440	71592025	71497732	ENSG00000253379.5	-	lincRNA	KNOWN	RP11-1102P16.1	5	5	-0.438794
chr8	71448811	71449219	71449015	ENSG00000253124.1	-	processed_pseudogene	KNOWN	TRAPPC2P2	1	1	-0.715363
chr8	71449695	71449808	71449751	ENSG00000221446.1	+	miRNA	NOVEL	AC099805.1	1	1	-0.715363
chr8	71675300	71702786	71689043	ENSG00000254277.1	+	lincRNA	KNOWN	RP11-1144P22.1	2	3	-0.320285
chr8	71779605	71792875	71786240	ENSG00000253287.1	-	lincRNA	KNOWN	RP11-281N10.1	1	3	-0.302972
chr8	71815494	71815625	71815559	ENSG00000200191.1	-	snoRNA	NOVEL	U8	1	1	-0.200363
chr8	71828167	72118393	71973280	ENSG00000235531.9	+	antisense	KNOWN	MSC-AS1	10	7	-0.155844
chr8	71832604	71832688	71832646	ENSG00000264576.1	-	miRNA	NOVEL	AC104012.1	1	1	0.168163
chr8	71841549	71844468	71843008	ENSG00000178860.8	-	protein_coding	KNOWN	MSC	3	2	0.168163
chr8	71895991	71896330	71896160	ENSG00000241942.2	+	processed_pseudogene	KNOWN	RPS20P20	1	1	-0.080324
chr8	72019917	72075617	72047767	ENSG00000104321.10	-	protein_coding	KNOWN	TRPA1	6	27	-0.203594
chr8	72196334	72202269	72199301	ENSG00000253317.1	+	lincRNA	KNOWN	RP11-142A23.1	1	2	-0.281467
chr8	72202751	72251565	72227158	ENSG00000250979.1	-	unprocessed_pseudogene	KNOWN	RP11-656G20.1	1	25	-0.520942
chr8	72357728	72357815	72357771	ENSG00000252509.1	+	rRNA	KNOWN	RNA5SP271	1	1	-0.541581
chr8	72429620	72430112	72429866	ENSG00000212989.3	+	processed_pseudogene	KNOWN	RP11-351E7.2	1	1	-0.046709
chr8	72462311	72470972	72466641	ENSG00000254347.1	+	lincRNA	KNOWN	RP11-351E7.1	1	2	-0.421785
chr8	72537391	72938349	72737870	ENSG00000182674.5	+	protein_coding	KNOWN	KCNB2	1	3	-0.362360
chr8	72618722	72619383	72619052	ENSG00000253226.1	-	processed_pseudogene	KNOWN	HAUS1P3	1	1	-0.601677
chr8	72660584	72661470	72661027	ENSG00000278193.1	-	unprocessed_pseudogene	KNOWN	RP11-313C15.2	1	2	-0.448577
chr8	72732045	72751843	72741944	ENSG00000253726.1	+	sense_intronic	KNOWN	RP11-313C15.1	1	3	-0.478004
chr8	72874859	72881740	72878299	ENSG00000253784.1	-	lincRNA	KNOWN	RP11-1145L24.1	1	3	-0.130401
chr8	72947150	72950445	72948797	ENSG00000260838.3	+	lincRNA	KNOWN	RP11-531A24.3	1	1	-0.039629
chr8	73008864	73048122	73028493	ENSG00000147601.13	+	protein_coding	KNOWN	TERF1	8	10	-0.126719
chr8	73018945	73019044	73018994	ENSG00000222488.1	-	snRNA	KNOWN	RNU6-285P	1	1	-0.166470
chr8	73042910	73043346	73043128	ENSG00000272254.1	-	antisense	KNOWN	RP11-531A24.7	1	1	-0.071894
chr8	73052178	73063061	73057619	ENSG00000253636.1	+	antisense	KNOWN	RP11-531A24.5	1	2	-0.023485
chr8	73064540	73124088	73094314	ENSG00000164764.10	-	protein_coding	KNOWN	SBSPON	2	5	-0.141925
chr8	73083787	73085879	73084833	ENSG00000237061.1	-	sense_intronic	KNOWN	RP11-956J14.1	1	2	-0.118687
chr8	73215929	73216627	73216278	ENSG00000253564.1	-	processed_pseudogene	KNOWN	RP11-956J14.2	1	1	-0.341358
chr8	73241329	73259502	73250415	ENSG00000274443.4	-	protein_coding	KNOWN	C8orf89	3	4	-0.198413
chr8	73273105	73273182	73273143	ENSG00000222334.4	+	miRNA	NOVEL	AC008598.1	1	1	-0.016785
chr8	73277364	73278046	73277705	ENSG00000254213.2	-	processed_pseudogene	KNOWN	RP11-434I12.5	1	1	-0.016785
chr8	73290267	73295789	73293028	ENSG00000147604.13	-	protein_coding	KNOWN	RPL7	8	7	0.357803
chr8	73294612	73325281	73309946	ENSG00000121039.9	+	protein_coding	KNOWN	RDH10	5	6	0.229644
chr8	73297711	73356461	73327086	ENSG00000250295.6	-	antisense	KNOWN	RDH10-AS1	3	6	0.146074
chr8	73358913	73362788	73360850	ENSG00000253339.1	+	lincRNA	KNOWN	RP11-434I12.3	2	2	0.250057
chr8	73368770	73369295	73369032	ENSG00000253235.1	-	lincRNA	KNOWN	RP11-434I12.4	1	2	0.250057
chr8	73420004	73441526	73430765	ENSG00000253302.1	+	antisense	KNOWN	STAU2-AS1	2	3	0.243553
chr8	73420369	73747708	73584038	ENSG00000040341.17	-	protein_coding	KNOWN	STAU2	29	15	-0.113926
chr8	73511276	73511654	73511465	ENSG00000254273.1	-	processed_pseudogene	KNOWN	RP11-181D18.4	1	1	-0.013618
chr8	73590574	73590883	73590728	ENSG00000253383.1	+	processed_pseudogene	KNOWN	RP11-116B19.2	1	1	-0.183243
chr8	73651289	73651602	73651445	ENSG00000254105.1	+	processed_pseudogene	KNOWN	VENTXP6	1	1	-0.061020
chr8	73670441	73732897	73701669	ENSG00000254538.1	+	lincRNA	KNOWN	RP11-463D19.1	2	3	-0.437589
chr8	73688691	73878854	73783772	ENSG00000258677.2	-	protein_coding	KNOWN	RP11-463D19.2	1	8	-0.073857
chr8	73780097	73878910	73829503	ENSG00000104343.19	-	protein_coding	KNOWN	UBE2W	7	7	0.088342
chr8	73831143	73831947	73831545	ENSG00000253273.2	+	unprocessed_pseudogene	KNOWN	RP11-99A14.1	1	1	0.052463
chr8	73833773	73834042	73833907	ENSG00000272469.2	-	misc_RNA	KNOWN	RN7SL760P	1	1	0.052463
chr8	73905357	73915010	73910183	ENSG00000251633.3	-	unprocessed_pseudogene	KNOWN	GYG1P1	1	2	0.078990
chr8	73939169	73972287	73955728	ENSG00000154582.16	-	protein_coding	KNOWN	TCEB1	10	6	0.165086
chr8	73972437	73982783	73977610	ENSG00000175606.10	+	protein_coding	KNOWN	TMEM70	7	4	0.170943
chr8	73982125	73982467	73982296	ENSG00000244295.2	+	processed_pseudogene	KNOWN	RPS20P21	1	1	0.170943
chr8	73984493	73984883	73984688	ENSG00000253833.1	+	processed_pseudogene	KNOWN	RP11-367E12.4	1	1	0.170943
chr8	73991352	74029087	74010219	ENSG00000154589.6	+	protein_coding	KNOWN	LY96	2	5	0.113933
chr8	74048677	74048784	74048730	ENSG00000212348.1	+	snRNA	KNOWN	RNU6-1300P	1	1	-0.139014
chr8	74052340	74099853	74076096	ENSG00000254288.1	+	lincRNA	KNOWN	RP11-6I2.3	1	2	-0.058394
chr8	74055882	74056647	74056264	ENSG00000240047.2	+	processed_pseudogene	KNOWN	RPS3AP32	1	1	-0.226456
chr8	74079537	74079643	74079590	ENSG00000212485.1	+	snRNA	KNOWN	RNU6-1197P	1	1	0.008091
chr8	74103516	74106744	74105130	ENSG00000253115.1	+	lincRNA	KNOWN	RP11-6I2.4	1	2	0.107846
chr8	74199396	74208441	74203918	ENSG00000253983.2	+	antisense	KNOWN	RP1-16A9.1	1	3	-0.496813
chr8	74234700	74321328	74278014	ENSG00000104369.4	-	protein_coding	KNOWN	JPH1	3	6	-0.398409
chr8	74321130	74488872	74405001	ENSG00000104381.12	+	protein_coding	KNOWN	GDAP1	8	6	-0.375506
chr8	74347757	74350050	74348903	ENSG00000253596.1	-	antisense	KNOWN	CTD-2320G14.2	1	2	-0.184563
chr8	74376687	74376793	74376740	ENSG00000207417.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.171043
chr8	74548543	74548617	74548580	ENSG00000266502.1	+	miRNA	KNOWN	MIR5681A	1	1	-0.954302
chr8	74599775	74823313	74711544	ENSG00000254349.5	+	lincRNA	KNOWN	MIR2052HG	4	7	-0.397135
chr8	74603244	74604244	74603744	ENSG00000253341.1	-	processed_pseudogene	KNOWN	RP11-730G20.2	1	1	-0.096865
chr8	74609698	74633320	74621509	ENSG00000254080.1	-	antisense	KNOWN	RP11-730G20.1	1	5	-0.524088
chr8	74798784	74866939	74832861	ENSG00000253706.5	-	antisense	KNOWN	RP11-758M4.4	3	4	-0.455439
chr8	74804287	74804811	74804549	ENSG00000253777.1	-	processed_pseudogene	KNOWN	RP11-758M4.3	1	1	-0.213817
chr8	74824537	74855029	74839783	ENSG00000137558.7	+	protein_coding	KNOWN	PI15	2	6	-0.519090
chr8	74891151	74896302	74893726	ENSG00000254043.1	-	lincRNA	KNOWN	RP11-3N13.2	1	2	-0.557676
chr8	74984515	75034558	75009536	ENSG00000121005.8	+	protein_coding	KNOWN	CRISPLD1	5	15	-0.536090
chr8	75026428	75029460	75027944	ENSG00000254238.1	-	antisense	KNOWN	RP11-300E4.2	1	2	-0.610622
chr8	75167704	75176656	75172180	ENSG00000253712.1	-	lincRNA	KNOWN	RP11-697M17.2	1	2	-0.579013
chr8	75223404	75324741	75274072	ENSG00000249395.2	-	lincRNA	KNOWN	CASC9	4	3	-0.382052
chr8	75302296	75302574	75302435	ENSG00000253229.1	+	processed_pseudogene	KNOWN	HIGD1AP6	1	1	-0.337516
chr8	75376709	75377014	75376861	ENSG00000254023.1	+	processed_pseudogene	KNOWN	PKMP4	1	1	-0.483868
chr8	75407914	75566843	75487378	ENSG00000164749.11	+	protein_coding	KNOWN	HNF4G	4	11	-0.617418
chr8	75786365	75786460	75786412	ENSG00000221029.1	-	miRNA	NOVEL	AC016194.1	1	1	-0.594254
chr8	76265543	76265732	76265637	ENSG00000222231.1	-	snRNA	KNOWN	RNU2-54P	1	1	-0.693883
chr8	76403998	76405091	76404544	ENSG00000270866.1	+	lincRNA	KNOWN	RP11-706J10.2	1	1	-0.475049
chr8	76404058	76407138	76405598	ENSG00000271167.1	+	lincRNA	KNOWN	LINC01109	1	1	-0.475049
chr8	76406654	76524356	76465505	ENSG00000254300.1	+	lincRNA	KNOWN	LINC01111	1	6	-0.389841
chr8	76491200	76683278	76587239	ENSG00000253661.1	-	antisense	KNOWN	ZFHX4-AS1	5	4	-0.520937
chr8	76576551	76579345	76577948	ENSG00000253681.1	-	sense_intronic	KNOWN	RP11-115I9.1	1	2	-0.522457
chr8	76603240	76603852	76603546	ENSG00000254305.1	-	transcribed_processed_pseudogene	KNOWN	MRPL9P1	1	1	-0.241618
chr8	76681219	76867285	76774252	ENSG00000091656.15	+	protein_coding	KNOWN	ZFHX4	12	11	-0.246798
chr8	76733302	76733476	76733389	ENSG00000276673.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.210571
chr8	76904591	76913399	76908995	ENSG00000253416.1	+	lincRNA	KNOWN	RP11-48D4.2	1	3	-0.090005
chr8	76966759	76966870	76966814	ENSG00000266712.2	-	miRNA	NOVEL	AC090810.1	1	1	-0.366373
chr8	76980258	77001044	76990651	ENSG00000164751.14	-	protein_coding	KNOWN	PEX2	6	5	0.068985
chr8	77013751	77014028	77013889	ENSG00000253952.1	-	processed_pseudogene	KNOWN	HIGD1AP18	1	1	-0.420343
chr8	77399072	77537290	77468181	ENSG00000254366.6	+	lincRNA	KNOWN	RP11-38H17.1	2	7	-0.652252
chr8	78148101	78153913	78151007	ENSG00000254001.5	+	lincRNA	KNOWN	RP11-91P17.1	2	2	-0.503371
chr8	78398515	78398622	78398568	ENSG00000252935.1	-	snRNA	KNOWN	RNU6-1220P	1	1	-0.319733
chr8	78426103	78558503	78492303	ENSG00000254266.5	-	lincRNA	KNOWN	PKIA-AS1	3	5	-0.746910
chr8	78516139	78605267	78560703	ENSG00000171033.12	+	protein_coding	KNOWN	PKIA	3	4	-0.553821
chr8	78605952	78609705	78607828	ENSG00000260398.1	+	sense_overlapping	KNOWN	RP11-594N15.3	1	1	-0.692740
chr8	78666047	78719765	78692906	ENSG00000104427.11	+	protein_coding	KNOWN	ZC2HC1A	4	9	-0.477806
chr8	78675743	78805523	78740633	ENSG00000104432.12	-	protein_coding	KNOWN	IL7	10	7	-0.591410
chr8	78723796	78724136	78723966	ENSG00000254352.1	-	processed_pseudogene	KNOWN	RP11-578O24.2	1	1	-0.745158
chr8	78760142	78762431	78761286	ENSG00000253919.1	-	processed_pseudogene	KNOWN	PRKRIRP7	1	1	-0.388440
chr8	78837529	78840522	78839025	ENSG00000261618.1	+	lincRNA	KNOWN	RP11-79H23.3	1	1	-0.563563
chr8	79097363	79097453	79097408	ENSG00000264969.1	+	miRNA	NOVEL	AC009941.1	1	1	-0.483321
chr8	79297717	79314471	79306094	ENSG00000253659.1	+	lincRNA	KNOWN	RP11-1114I9.1	1	3	-0.101709
chr8	79520145	79520649	79520397	ENSG00000253391.1	+	processed_pseudogene	KNOWN	RP11-758H6.1	1	1	-0.457347
chr8	79571153	79572335	79571744	ENSG00000240540.2	-	processed_pseudogene	KNOWN	RPL3P9	1	1	-0.429174
chr8	79610814	79666175	79638494	ENSG00000104435.13	+	protein_coding	KNOWN	STMN2	3	6	-0.404625
chr8	79764010	79767863	79765936	ENSG00000164683.16	-	protein_coding	KNOWN	HEY1	8	5	-0.129136
chr8	79768142	79802842	79785492	ENSG00000272138.1	+	lincRNA	KNOWN	LINC01607	2	4	-0.062602
chr8	79769372	79871759	79820565	ENSG00000249328.2	-	lincRNA	KNOWN	RP11-26J3.1	2	6	-0.013286
chr8	79800133	79800195	79800164	ENSG00000238884.1	-	snRNA	KNOWN	RNU7-85P	1	1	-0.034920
chr8	79918717	80030289	79974503	ENSG00000147586.9	-	protein_coding	KNOWN	MRPS28	9	4	-0.145230
chr8	79918860	80080775	79999817	ENSG00000276418.5	-	protein_coding	KNOWN	RP11-26J3.4	1	8	-0.168564
chr8	79956465	79957381	79956923	ENSG00000272518.1	-	sense_intronic	KNOWN	RP11-26J3.3	1	1	-0.304361
chr8	80032724	80033300	80033012	ENSG00000272264.1	-	lincRNA	KNOWN	RP11-92K15.3	1	1	-0.206975
chr8	80034745	80231232	80132988	ENSG00000076554.15	-	protein_coding	KNOWN	TPD52	29	9	-0.148848
chr8	80122852	80127670	80125261	ENSG00000254205.1	+	antisense	KNOWN	RP11-92K15.1	1	2	-0.269516
chr8	80204606	80204902	80204754	ENSG00000241550.3	+	misc_RNA	KNOWN	RN7SL41P	1	1	-0.245043
chr8	80241389	80241473	80241431	ENSG00000265588.1	+	miRNA	KNOWN	MIR5708	1	1	0.041068
chr8	80265528	80266155	80265841	ENSG00000241746.1	-	processed_pseudogene	KNOWN	RP11-941H19.1	1	1	0.015371
chr8	80266154	80339840	80302997	ENSG00000253238.1	+	lincRNA	KNOWN	RP11-941H19.3	1	4	-0.055198
chr8	80300869	80301481	80301175	ENSG00000213791.4	+	processed_pseudogene	KNOWN	RP11-941H19.2	1	1	-0.073067
chr8	80316939	80317069	80317004	ENSG00000206649.1	-	snoRNA	NOVEL	SNORA20	1	1	-0.234369
chr8	80351132	80351416	80351274	ENSG00000253237.2	+	processed_pseudogene	KNOWN	RP11-775E10.1	1	1	-0.098439
chr8	80405516	80405609	80405562	ENSG00000252884.1	+	snRNA	KNOWN	RNU6-1213P	1	1	-0.521399
chr8	80484561	80485619	80485090	ENSG00000251867.3	-	antisense	KNOWN	RP11-48B3.5	1	1	-0.387405
chr8	80484589	80484683	80484636	ENSG00000277604.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.387405
chr8	80485619	80526265	80505942	ENSG00000205189.11	+	protein_coding	KNOWN	ZBTB10	5	7	-0.226507
chr8	80535006	80539135	80537070	ENSG00000254162.1	-	lincRNA	KNOWN	RP11-48B3.3	1	2	-0.439621
chr8	80541300	80543104	80542202	ENSG00000260317.1	+	lincRNA	KNOWN	RP11-48B3.4	1	1	-0.439621
chr8	80558870	80559757	80559313	ENSG00000188856.6	+	processed_pseudogene	KNOWN	RPSAP47	1	1	-0.432535
chr8	80560567	80560625	80560596	ENSG00000252057.2	+	snRNA	KNOWN	RNU7-174P	1	1	-0.432535
chr8	80568050	80568506	80568278	ENSG00000253760.1	-	processed_pseudogene	KNOWN	RP11-48B3.2	1	1	-0.432535
chr8	80585585	80585773	80585679	ENSG00000223327.1	-	snRNA	KNOWN	RNU2-71P	1	1	-0.206232
chr8	80594815	80595703	80595259	ENSG00000254181.1	-	processed_pseudogene	KNOWN	SLC25A51P3	1	1	-0.459023
chr8	80613544	80613826	80613685	ENSG00000243424.2	-	misc_RNA	KNOWN	RN7SL107P	1	1	0.044686
chr8	80628451	80874781	80751616	ENSG00000164684.13	-	protein_coding	KNOWN	ZNF704	6	9	-0.283543
chr8	80644939	80645173	80645056	ENSG00000254331.1	-	processed_pseudogene	KNOWN	CKS1BP7	1	1	-0.248552
chr8	80749561	80749693	80749627	ENSG00000212429.1	-	snRNA	KNOWN	RNU11-6P	1	1	-0.283300
chr8	80776666	80776962	80776814	ENSG00000243951.1	-	misc_RNA	KNOWN	RN7SL308P	1	1	-0.767309
chr8	80812142	80812581	80812361	ENSG00000253516.1	-	processed_pseudogene	KNOWN	HMGB1P41	1	1	-0.249625
chr8	80967810	81112068	81039939	ENSG00000076641.4	-	protein_coding	KNOWN	PAG1	4	9	-0.085560
chr8	81036964	81040831	81038897	ENSG00000254060.1	+	lincRNA	KNOWN	RP11-172E10.1	1	3	0.052025
chr8	81058523	81067744	81063133	ENSG00000254177.1	+	lincRNA	KNOWN	RP11-1149M10.1	1	2	-0.275984
chr8	81154279	81164599	81159439	ENSG00000253214.1	+	lincRNA	KNOWN	RP11-1149M10.2	2	3	0.200926
chr8	81244156	81244338	81244247	ENSG00000254014.1	+	processed_pseudogene	KNOWN	RP11-363E6.1	1	1	-0.389415
chr8	81254870	81255229	81255049	ENSG00000253677.1	+	processed_pseudogene	KNOWN	UBE2HP1	1	1	-0.443675
chr8	81275399	81277570	81276484	ENSG00000272425.1	-	lincRNA	KNOWN	RP11-363E6.4	1	1	-0.487900
chr8	81279871	81281446	81280658	ENSG00000254027.1	-	antisense	KNOWN	RP11-363E6.3	2	2	-0.487900
chr8	81280363	81284777	81282570	ENSG00000164687.10	+	protein_coding	KNOWN	FABP5	4	4	-0.487900
chr8	81356161	81356274	81356217	ENSG00000273902.1	+	miRNA	NOVEL	AC018616.1	1	1	-0.658981
chr8	81439436	81521818	81480627	ENSG00000253859.2	+	antisense	KNOWN	RP11-157I4.4	1	4	-0.560063
chr8	81440326	81447523	81443924	ENSG00000147588.6	-	protein_coding	KNOWN	PMP2	2	4	-0.390401
chr8	81458341	81461579	81459960	ENSG00000205186.2	-	protein_coding	KNOWN	FABP9	1	4	-0.644974
chr8	81478419	81483263	81480841	ENSG00000170323.8	-	protein_coding	KNOWN	FABP4	4	4	-0.736397
chr8	81521618	81533275	81527446	ENSG00000253374.5	+	antisense	KNOWN	RP11-257P3.3	2	4	-0.240797
chr8	81521682	81522232	81521957	ENSG00000237264.4	-	processed_pseudogene	KNOWN	FTH1P11	1	1	-0.245043
chr8	81524981	81531378	81528179	ENSG00000197416.4	-	protein_coding	KNOWN	FABP12	2	4	-0.241786
chr8	81605569	81631134	81618351	ENSG00000251521.2	-	transcribed_unprocessed_pseudogene	KNOWN	IMPA1P	2	8	-0.586959
chr8	81617220	81618560	81617890	ENSG00000254151.1	-	processed_pseudogene	KNOWN	NIPA2P4	1	1	-0.644974
chr8	81627269	81627617	81627443	ENSG00000240427.1	+	processed_pseudogene	KNOWN	RPS26P34	1	1	-0.644974
chr8	81634357	81635662	81635009	ENSG00000205184.2	-	unprocessed_pseudogene	KNOWN	SLC10A5P1	1	1	-0.282133
chr8	81657961	81686693	81672327	ENSG00000133731.9	-	protein_coding	KNOWN	IMPA1	13	10	-0.197953
chr8	81693607	81696174	81694890	ENSG00000253598.1	-	protein_coding	KNOWN	SLC10A5	1	1	-0.210037
chr8	81696368	81698694	81697531	ENSG00000280193.1	+	TEC	KNOWN	RP13-923O23.7	1	1	-0.210037
chr8	81701334	81732903	81717118	ENSG00000104231.10	-	protein_coding	KNOWN	ZFAND1	25	9	-0.312965
chr8	81732434	81759515	81745974	ENSG00000164695.4	+	protein_coding	KNOWN	CHMP4C	1	5	-0.302260
chr8	81791823	81815714	81803768	ENSG00000253334.1	+	antisense	KNOWN	RP13-923O23.6	1	2	-0.525007
chr8	81799581	81842866	81821223	ENSG00000104497.13	-	protein_coding	KNOWN	SNX16	12	11	-0.414238
chr8	81807772	81808726	81808249	ENSG00000231942.3	+	processed_pseudogene	KNOWN	HNRNPA1P36	1	1	-0.514997
chr8	81885377	81923193	81904285	ENSG00000254689.1	+	lincRNA	KNOWN	RP11-354A14.1	1	2	-0.337589
chr8	82098451	82160577	82129514	ENSG00000254123.1	-	lincRNA	KNOWN	RP11-99H20.1	2	3	-0.690440
chr8	82291624	82292379	82292001	ENSG00000206228.4	-	processed_pseudogene	KNOWN	HNRNPA1P4	1	1	-0.936577
chr8	82514568	82677153	82595860	ENSG00000253503.5	-	lincRNA	KNOWN	RP11-653B10.1	2	7	-0.544117
chr8	82862779	82958696	82910737	ENSG00000253836.1	-	lincRNA	KNOWN	RP11-731N10.1	1	6	-0.618312
chr8	82912104	82961926	82937015	ENSG00000254394.1	+	lincRNA	KNOWN	CTD-2272D18.1	1	4	-0.634511
chr8	82979411	82979886	82979648	ENSG00000253581.1	+	processed_pseudogene	KNOWN	CTD-2272D18.2	1	1	-0.677395
chr8	83024813	83024909	83024861	ENSG00000277929.1	+	miRNA	NOVEL	AC090095.1	1	1	-0.685616
chr8	83099976	83100846	83100411	ENSG00000254189.1	-	processed_pseudogene	KNOWN	RP11-296C13.1	1	1	-0.564803
chr8	83200952	83202431	83201691	ENSG00000253423.1	-	processed_pseudogene	KNOWN	RP11-813B8.1	1	1	-0.782477
chr8	83293925	83294271	83294098	ENSG00000274116.1	-	processed_pseudogene	KNOWN	RP11-813B8.2	1	1	-0.744509
chr8	83314617	83314710	83314663	ENSG00000275537.1	-	miRNA	NOVEL	AC090132.1	1	1	-0.746257
chr8	83403758	83408900	83406329	ENSG00000253898.1	+	lincRNA	KNOWN	LINC01419	1	2	-0.436185
chr8	83912713	84140283	84026498	ENSG00000254202.1	+	lincRNA	KNOWN	RP11-120I21.2	1	4	-0.517076
chr8	84162118	84162471	84162294	ENSG00000254195.1	+	processed_pseudogene	KNOWN	TPM3P3	1	1	-1.089178
chr8	84163449	84164564	84164006	ENSG00000253362.1	-	unprocessed_pseudogene	KNOWN	RP11-120I21.3	1	4	-1.089178
chr8	84182787	84921844	84552315	ENSG00000184672.11	+	protein_coding	KNOWN	RALYL	11	10	-0.611056
chr8	84296003	84296088	84296045	ENSG00000221185.2	-	miRNA	NOVEL	AC103816.1	1	1	-0.562680
chr8	84408607	84408663	84408635	ENSG00000275039.1	+	miRNA	NOVEL	AC092699.1	1	1	-0.663470
chr8	84665759	84665865	84665812	ENSG00000206701.1	-	snRNA	KNOWN	RNU6-1040P	1	1	-0.656136
chr8	84678798	84679842	84679320	ENSG00000253137.1	+	processed_pseudogene	KNOWN	RP11-509P12.1	1	1	-0.884029
chr8	84828573	84829479	84829026	ENSG00000248978.2	-	unprocessed_pseudogene	KNOWN	RP11-98H4.1	1	2	-0.723925
chr8	84864668	84864907	84864787	ENSG00000254212.1	-	processed_pseudogene	KNOWN	RP11-98H4.4	1	1	-0.842120
chr8	84948585	84949674	84949129	ENSG00000203413.3	+	processed_pseudogene	KNOWN	ACTBP6	1	1	-0.754385
chr8	84980073	84980547	84980310	ENSG00000253655.2	-	processed_pseudogene	KNOWN	IGJP1	1	1	-0.597408
chr8	85086615	85087186	85086900	ENSG00000253283.1	+	processed_pseudogene	KNOWN	RP11-146E23.2	1	1	-0.257342
chr8	85107147	85146076	85126611	ENSG00000133739.15	+	protein_coding	KNOWN	LRRCC1	6	19	-0.384023
chr8	85172077	85177062	85174569	ENSG00000260493.1	-	antisense	KNOWN	RP11-219B4.7	2	3	-0.254459
chr8	85177225	85217158	85197191	ENSG00000133740.10	+	protein_coding	KNOWN	E2F5	8	8	-0.327072
chr8	85177522	85178150	85177836	ENSG00000254208.1	-	antisense	KNOWN	RP11-219B4.3	1	2	-0.254459
chr8	85214076	85220421	85217248	ENSG00000176731.11	-	protein_coding	KNOWN	C8orf59	13	5	-0.247318
chr8	85220587	85284073	85252330	ENSG00000185015.7	+	protein_coding	KNOWN	CA13	5	8	-0.175056
chr8	85222446	85245717	85234081	ENSG00000258256.1	-	antisense	KNOWN	RP11-219B4.5	2	3	-0.173688
chr8	85246295	85249848	85248071	ENSG00000257962.1	-	antisense	KNOWN	RP11-219B4.6	1	2	-0.138306
chr8	85327608	85379014	85353311	ENSG00000133742.13	-	protein_coding	KNOWN	CA1	25	9	-0.593885
chr8	85373436	85449040	85411238	ENSG00000164879.6	+	protein_coding	KNOWN	CA3	3	7	-0.399890
chr8	85441851	85464915	85453383	ENSG00000253549.5	-	antisense	KNOWN	CA3-AS1	3	3	-0.229199
chr8	85463852	85481493	85472672	ENSG00000104267.9	+	protein_coding	KNOWN	CA2	5	7	-0.445685
chr8	85523899	85540511	85532205	ENSG00000254380.1	+	lincRNA	KNOWN	RP11-317J10.4	1	3	-0.493353
chr8	85617344	85617512	85617428	ENSG00000253680.1	-	processed_pseudogene	KNOWN	RP11-59O2.1	1	1	-0.505249
chr8	85642777	85646325	85644551	ENSG00000270971.2	-	processed_pseudogene	KNOWN	REXO1L8P	1	2	-0.433099
chr8	85654684	85658514	85656599	ENSG00000273567.1	-	processed_pseudogene	KNOWN	REXO1L3P	1	2	0.012598
chr8	85656442	85663497	85659969	ENSG00000205176.3	-	transcribed_processed_pseudogene	KNOWN	REXO1L1P	2	1	0.012598
chr8	85714922	85715833	85715377	ENSG00000276006.1	+	processed_pseudogene	KNOWN	REXO1L12P	1	1	-0.032815
chr8	85733459	85737286	85735372	ENSG00000275928.1	+	processed_pseudogene	KNOWN	REXO1L11P	1	2	-0.176091
chr8	85744543	85748373	85746458	ENSG00000276540.1	-	processed_pseudogene	KNOWN	REXO1L10P	1	2	-0.176091
chr8	85762909	85766931	85764920	ENSG00000271381.2	-	processed_pseudogene	KNOWN	REXO1L9P	1	2	-0.088391
chr8	85775106	85779090	85777098	ENSG00000276998.1	-	processed_pseudogene	KNOWN	REXO1L2P	1	2	0.002367
chr8	85790382	85794399	85792390	ENSG00000274343.1	-	processed_pseudogene	KNOWN	REXO1L7P	1	2	-0.107281
chr8	85802574	85806435	85804504	ENSG00000270416.2	-	processed_pseudogene	KNOWN	REXO1L4P	1	2	-0.107281
chr8	85814767	85818783	85816775	ENSG00000277436.1	-	processed_pseudogene	KNOWN	REXO1L5P	1	2	-0.081416
chr8	85826865	85828467	85827666	ENSG00000277422.1	-	transcribed_processed_pseudogene	KNOWN	REXO1L6P	2	1	-0.081416
chr8	85839705	85951083	85895394	ENSG00000253154.1	+	lincRNA	KNOWN	CTA-392E5.1	2	4	-0.448542
chr8	85987323	86154228	86070775	ENSG00000147614.3	+	protein_coding	KNOWN	ATP6V0D2	3	8	-0.298094
chr8	86016819	86017126	86016972	ENSG00000227753.3	+	processed_pseudogene	KNOWN	RP11-216N21.1	1	1	-0.299330
chr8	86043102	86043507	86043304	ENSG00000243761.1	+	processed_pseudogene	KNOWN	RP11-216N21.2	1	1	-0.441227
chr8	86048373	86088621	86068497	ENSG00000147613.7	-	protein_coding	KNOWN	PSKH2	3	3	-0.182757
chr8	86098965	86154225	86126595	ENSG00000253675.1	-	antisense	KNOWN	CTD-3118D11.2	2	2	-0.216040
chr8	86180418	86212236	86196327	ENSG00000253699.1	+	antisense	KNOWN	CTD-3118D11.3	1	5	-0.293421
chr8	86214052	86321146	86267599	ENSG00000164893.8	-	protein_coding	KNOWN	SLC7A13	3	5	-0.456234
chr8	86333274	86343314	86338294	ENSG00000254231.1	-	processed_transcript	KNOWN	CTD-2284J15.1	2	4	-0.060011
chr8	86342738	86478420	86410579	ENSG00000123124.13	+	protein_coding	KNOWN	WWP1	11	25	-0.179855
chr8	86468257	86514357	86491307	ENSG00000176623.11	-	protein_coding	KNOWN	RMDN1	19	10	-0.084943
chr8	86481754	86483002	86482378	ENSG00000250569.1	-	processed_pseudogene	KNOWN	NTAN1P2	1	2	-0.109215
chr8	86484830	86561498	86523164	ENSG00000085719.11	+	protein_coding	KNOWN	CPNE3	14	17	-0.127191
chr8	86503591	86505061	86504326	ENSG00000254088.1	+	processed_pseudogene	KNOWN	SLC2A3P4	1	1	-0.115700
chr8	86553977	86743675	86648826	ENSG00000170289.12	-	protein_coding	KNOWN	CNGB3	3	18	-0.436597
chr8	86593755	86594589	86594172	ENSG00000253292.1	-	processed_pseudogene	KNOWN	MIOXP1	1	1	-0.379314
chr8	86657388	86660293	86658840	ENSG00000205333.5	-	processed_pseudogene	KNOWN	GOLGA2P1	1	1	-0.429245
chr8	86657870	86657952	86657911	ENSG00000221137.1	-	miRNA	NOVEL	AC013751.1	1	1	-0.429245
chr8	86660525	86661922	86661223	ENSG00000233915.4	-	processed_pseudogene	KNOWN	UBE2Q2P10	1	3	-0.429245
chr8	86707547	86765023	86736285	ENSG00000254115.1	+	antisense	KNOWN	RP11-386D6.1	1	3	-0.655036
chr8	86765935	86818558	86792246	ENSG00000253778.1	+	lincRNA	KNOWN	RP11-386D6.2	1	6	-0.682586
chr8	86776479	86776638	86776558	ENSG00000253568.1	-	processed_pseudogene	KNOWN	RP11-386D6.3	1	1	-0.820061
chr8	86866442	87615219	87240830	ENSG00000176571.11	+	protein_coding	KNOWN	CNBD1	7	11	-0.635365
chr8	87540835	87755718	87648276	ENSG00000253500.5	-	antisense	KNOWN	AF121898.3	3	5	-0.495714
chr8	87575598	87576508	87576053	ENSG00000253401.1	-	processed_pseudogene	KNOWN	VTA1P2	1	1	-0.391433
chr8	87598462	87601634	87600048	ENSG00000251563.1	-	processed_pseudogene	KNOWN	IARS2P1	1	1	-0.638822
chr8	87788562	87789688	87789125	ENSG00000254376.2	-	processed_pseudogene	KNOWN	SOX5P	1	1	-0.547418
chr8	87867601	87868607	87868104	ENSG00000273978.1	+	unprocessed_pseudogene	KNOWN	CTB-118P15.3	1	1	-0.347829
chr8	87870743	87874068	87872405	ENSG00000176566.4	-	protein_coding	KNOWN	DCAF4L2	1	1	-0.205844
chr8	87974165	88019113	87996639	ENSG00000253171.1	+	antisense	KNOWN	CTB-118P15.2	1	6	-0.297636
chr8	88032009	88328025	88180017	ENSG00000156103.15	-	protein_coding	KNOWN	MMP16	4	10	-0.418955
chr8	88326836	88737134	88531985	ENSG00000253553.5	+	antisense	KNOWN	RP11-586K2.1	6	5	-0.538910
chr8	88396437	88396547	88396492	ENSG00000251904.1	-	rRNA	KNOWN	RNA5SP272	1	1	-0.604002
chr8	88485110	88486094	88485602	ENSG00000250962.1	+	processed_pseudogene	KNOWN	RP11-69I13.1	1	2	-0.488294
chr8	88732497	88732594	88732545	ENSG00000278105.1	+	miRNA	NOVEL	AC090578.1	1	1	-0.623640
chr8	88808318	88808908	88808613	ENSG00000271156.1	-	lincRNA	KNOWN	RP11-642C5.1	1	1	-1.212342
chr8	89243401	89243793	89243597	ENSG00000253621.1	-	processed_pseudogene	KNOWN	RPSAP74	1	1	-0.565407
chr8	89412621	89415071	89413846	ENSG00000248231.1	-	processed_pseudogene	KNOWN	KRT8P4	1	2	-0.306926
chr8	89609409	89757727	89683568	ENSG00000251136.8	-	lincRNA	KNOWN	RP11-37B2.1	10	7	-0.225905
chr8	89757747	89791063	89774405	ENSG00000104312.7	+	protein_coding	KNOWN	RIPK2	4	11	-0.253877
chr8	89823548	89823802	89823675	ENSG00000253349.1	-	processed_pseudogene	KNOWN	COX6B1P6	1	1	-0.177195
chr8	89826593	89833564	89830078	ENSG00000275103.1	+	unprocessed_pseudogene	KNOWN	SCb-64M4.1	1	3	-0.273542
chr8	89900721	89900824	89900772	ENSG00000207359.1	-	snRNA	KNOWN	RNU6-925P	1	1	0.158718
chr8	89901859	89927888	89914873	ENSG00000164823.9	+	protein_coding	KNOWN	OSGIN2	3	6	-0.074550
chr8	89933336	90003228	89968282	ENSG00000104320.13	-	protein_coding	KNOWN	NBN	11	19	-0.215033
chr8	90001405	90052092	90026748	ENSG00000104325.6	+	protein_coding	KNOWN	DECR1	19	12	-0.161524
chr8	90058608	90095475	90077041	ENSG00000104327.7	-	protein_coding	KNOWN	CALB1	11	11	-0.575823
chr8	90221488	90569318	90395403	ENSG00000253394.5	+	lincRNA	KNOWN	LINC00534	4	4	-0.430666
chr8	90511128	90511240	90511184	ENSG00000199354.1	+	rRNA	KNOWN	RNA5SP273	1	1	-0.293130
chr8	90534611	90620070	90577340	ENSG00000254180.1	-	lincRNA	KNOWN	AB015752.3	1	5	-0.347058
chr8	90592804	90606065	90599434	ENSG00000253799.1	-	lincRNA	KNOWN	LINC01030	1	3	-0.339348
chr8	90621995	90791632	90706813	ENSG00000180694.13	-	protein_coding	KNOWN	TMEM64	7	6	-0.167302
chr8	90646441	90656598	90651519	ENSG00000246792.2	+	antisense	KNOWN	RP11-68L18.1	3	3	-0.048696
chr8	90701082	90701876	90701479	ENSG00000254182.1	+	processed_pseudogene	KNOWN	RP11-68L18.2	1	2	-0.267089
chr8	90791550	90959408	90875479	ENSG00000123119.11	+	protein_coding	KNOWN	NECAB1	6	13	-0.458676
chr8	90806474	90859240	90832857	ENSG00000254251.1	-	antisense	KNOWN	RP11-662G23.1	1	4	-0.429357
chr8	90958637	90985257	90971947	ENSG00000253250.2	-	protein_coding	KNOWN	C8orf88	1	6	-0.739225
chr8	90993796	91041064	91017430	ENSG00000155099.7	-	protein_coding	KNOWN	TMEM55A	6	8	-0.338683
chr8	91016588	91018655	91017621	ENSG00000253358.1	+	antisense	KNOWN	GS1-251I9.3	1	2	-0.046455
chr8	91042690	91044762	91043726	ENSG00000254219.1	-	processed_transcript	KNOWN	GS1-251I9.2	2	3	-0.665807
chr8	91059909	91070189	91065049	ENSG00000253738.1	-	antisense	KNOWN	OTUD6B-AS1	2	3	-0.427058
chr8	91070196	91087095	91078645	ENSG00000155100.10	+	protein_coding	KNOWN	OTUD6B	6	8	-0.423846
chr8	91101832	91219236	91160534	ENSG00000214954.8	+	protein_coding	KNOWN	LRRC69	7	11	-0.445108
chr8	91157285	91158748	91158016	ENSG00000253525.1	+	processed_pseudogene	KNOWN	CTD-2114J12.1	1	1	-0.688227
chr8	91205485	91205559	91205522	ENSG00000266194.1	+	miRNA	KNOWN	MIR4661	1	1	-0.698555
chr8	91209494	91398152	91303823	ENSG00000147606.8	+	protein_coding	KNOWN	SLC26A7	10	20	-0.490156
chr8	91542924	91907619	91725271	ENSG00000253901.1	-	lincRNA	KNOWN	RP11-122C21.1	2	4	-0.385101
chr8	91594965	91595241	91595103	ENSG00000200151.1	+	misc_RNA	KNOWN	RN7SKP231	1	1	-0.681237
chr8	91909738	91910167	91909952	ENSG00000271202.1	-	processed_pseudogene	KNOWN	PRR13P7	1	1	-0.142303
chr8	91917507	91917918	91917712	ENSG00000229182.3	+	processed_pseudogene	KNOWN	MRPS16P1	1	1	-0.272883
chr8	91954967	92103286	92029126	ENSG00000079102.16	-	protein_coding	KNOWN	RUNX1T1	52	15	-0.149614
chr8	91975908	91977418	91976663	ENSG00000253576.1	+	antisense	KNOWN	GS1-5L10.1	1	2	-0.403216
chr8	92144088	92144435	92144261	ENSG00000233778.3	-	processed_pseudogene	KNOWN	RP11-777J24.1	1	1	-0.024261
chr8	92351912	92352148	92352030	ENSG00000253118.1	-	processed_pseudogene	KNOWN	RP11-700E23.3	1	1	-0.700413
chr8	92403545	92413645	92408595	ENSG00000253682.1	-	lincRNA	KNOWN	RP11-700E23.2	1	6	-0.333293
chr8	92420850	92421798	92421324	ENSG00000253749.1	-	lincRNA	KNOWN	RP11-700E23.1	1	2	-0.561205
chr8	92500583	92509816	92505199	ENSG00000253371.1	-	lincRNA	KNOWN	RP11-587H10.1	1	3	-0.140893
chr8	92565443	92655494	92610468	ENSG00000253634.1	-	lincRNA	KNOWN	RP11-587H10.2	1	5	-0.266365
chr8	92635335	92635465	92635400	ENSG00000221172.1	+	miRNA	NOVEL	AC091096.1	1	1	-0.074469
chr8	92668836	92679594	92674215	ENSG00000253177.1	+	lincRNA	KNOWN	RP11-100L22.1	2	2	-0.636863
chr8	92699742	92879502	92789622	ENSG00000248858.7	-	processed_transcript	KNOWN	FLJ46284	4	4	-0.421196
chr8	92723024	92725111	92724067	ENSG00000254020.1	-	lincRNA	KNOWN	RP11-100L22.4	1	2	-0.353952
chr8	92765702	92776451	92771076	ENSG00000253577.1	+	lincRNA	KNOWN	RP11-100L22.3	1	3	-0.367088
chr8	92882984	92965645	92924314	ENSG00000253197.5	+	antisense	KNOWN	CTD-3239E11.2	2	6	-0.479186
chr8	92883530	93017673	92950601	ENSG00000205133.11	-	protein_coding	KNOWN	TRIQK	23	6	-0.471088
chr8	92972575	92974738	92973656	ENSG00000251347.2	+	processed_pseudogene	KNOWN	IRF5P1	1	1	-0.162429
chr8	93029751	93029839	93029795	ENSG00000277063.1	+	miRNA	KNOWN	MIR8084	1	1	-0.400405
chr8	93134095	93166850	93150472	ENSG00000279847.3	-	lincRNA	KNOWN	C8orf87	3	3	-0.829561
chr8	93213302	93700433	93456867	ENSG00000246662.6	-	antisense	KNOWN	LINC00535	4	11	-0.459093
chr8	93215925	93234878	93225401	ENSG00000253960.1	-	lincRNA	KNOWN	RP11-388K12.1	1	4	-0.640246
chr8	93229659	93229916	93229787	ENSG00000268080.2	+	processed_pseudogene	KNOWN	RP11-388K12.3	1	1	-0.679934
chr8	93259667	93297976	93278821	ENSG00000254089.1	+	lincRNA	KNOWN	RP11-388K12.2	1	3	-0.601158
chr8	93441277	93441384	93441330	ENSG00000222416.1	+	rRNA	KNOWN	RNA5SP274	1	1	-0.431570
chr8	93646066	93647092	93646579	ENSG00000253781.1	+	processed_pseudogene	KNOWN	ZNF317P1	1	1	-0.522718
chr8	93698561	93731527	93715044	ENSG00000188343.12	+	protein_coding	KNOWN	FAM92A1	19	10	-0.074671
chr8	93715378	93716113	93715745	ENSG00000271971.1	-	antisense	KNOWN	CTD-2006H14.2	1	1	-0.074827
chr8	93719574	93721167	93720370	ENSG00000253854.1	+	antisense	KNOWN	RP11-10N23.2	1	2	-0.074827
chr8	93729356	93741017	93735186	ENSG00000183808.11	-	protein_coding	KNOWN	RBM12B	8	4	-0.271805
chr8	93733216	93734022	93733619	ENSG00000253722.1	+	antisense	KNOWN	RP11-10N23.4	1	2	-0.283300
chr8	93740121	93740773	93740447	ENSG00000279331.1	+	TEC	KNOWN	RBM12B-AS1	1	1	-0.283300
chr8	93741193	93744534	93742863	ENSG00000253848.1	+	antisense	KNOWN	RP11-10N23.5	1	2	-0.283300
chr8	93754844	93819234	93787039	ENSG00000164953.15	+	protein_coding	KNOWN	TMEM67	22	29	-0.089930
chr8	93834454	93846743	93840598	ENSG00000254057.1	-	lincRNA	KNOWN	RP3-388N13.3	1	2	0.350968
chr8	93849561	93850075	93849818	ENSG00000254387.1	+	processed_pseudogene	KNOWN	MYL12AP1	1	1	0.303450
chr8	93857807	93926066	93891936	ENSG00000164951.15	+	protein_coding	KNOWN	PDP1	10	4	0.078610
chr8	93915734	93916682	93916208	ENSG00000264448.3	-	lincRNA	KNOWN	RP3-388N13.5	1	1	0.100816
chr8	93916022	93916119	93916070	ENSG00000276513.1	-	miRNA	KNOWN	MIR378D2	1	1	0.100816
chr8	93939364	93942877	93941120	ENSG00000251234.1	-	processed_pseudogene	KNOWN	PSMA2P2	1	3	0.193275
chr8	93957338	93957691	93957514	ENSG00000240509.1	-	processed_pseudogene	KNOWN	RPL34P18	1	1	0.091992
chr8	93973854	93973923	93973888	ENSG00000263855.1	+	miRNA	NOVEL	AC105081.1	1	1	0.163942
chr8	93974671	93974776	93974723	ENSG00000275386.1	-	unprocessed_pseudogene	KNOWN	CTC-788C1.2	1	1	0.163942
chr8	94097764	94104322	94101043	ENSG00000253585.1	-	lincRNA	KNOWN	KB-1184D12.1	1	3	-0.183243
chr8	94127171	94217303	94172237	ENSG00000079112.9	-	protein_coding	KNOWN	CDH17	5	18	-0.140876
chr8	94201913	94203052	94202482	ENSG00000249510.1	-	processed_pseudogene	KNOWN	KB-1247B1.1	1	2	-0.351615
chr8	94249253	94262350	94255801	ENSG00000164949.7	-	protein_coding	KNOWN	GEM	5	5	-0.094895
chr8	94352923	94353653	94353288	ENSG00000244217.1	+	processed_pseudogene	KNOWN	RPS4XP10	1	1	-0.284863
chr8	94371960	94475109	94423534	ENSG00000197275.12	-	protein_coding	KNOWN	RAD54B	9	15	-0.304330
chr8	94378377	94436952	94407664	ENSG00000265817.1	-	protein_coding	KNOWN	FSBP	2	12	-0.320734
chr8	94427712	94429888	94428800	ENSG00000280123.1	-	TEC	KNOWN	RP11-267M23.1	1	1	-0.330032
chr8	94487693	94553529	94520611	ENSG00000164944.11	-	protein_coding	KNOWN	KIAA1429	9	24	-0.173264
chr8	94533628	94534391	94534009	ENSG00000254315.1	+	antisense	KNOWN	RP11-267M23.3	1	2	-0.273005
chr8	94553722	94569745	94561733	ENSG00000253704.1	+	lincRNA	KNOWN	RP11-267M23.4	1	2	-0.153419
chr8	94565036	94565715	94565375	ENSG00000253175.1	+	processed_pseudogene	KNOWN	RP11-267M23.6	1	2	-0.153419
chr8	94590115	94590259	94590187	ENSG00000254190.1	+	processed_pseudogene	KNOWN	RP11-267M23.5	1	1	-0.063659
chr8	94594411	94594601	94594506	ENSG00000254283.1	+	processed_pseudogene	KNOWN	RP11-267M23.7	1	1	-0.063659
chr8	94637285	94639467	94638376	ENSG00000261437.1	-	antisense	KNOWN	RP11-22C11.2	1	1	-0.113123
chr8	94641074	94707466	94674270	ENSG00000104413.15	+	protein_coding	KNOWN	ESRP1	11	16	-0.324060
chr8	94655911	94656208	94656059	ENSG00000274701.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.188116
chr8	94688228	94688610	94688419	ENSG00000241003.1	+	processed_pseudogene	KNOWN	RP11-22C11.1	1	1	-0.351615
chr8	94708952	94709244	94709098	ENSG00000253429.1	-	processed_pseudogene	KNOWN	KB-1090H4.2	1	1	-0.555948
chr8	94713715	94713812	94713763	ENSG00000199701.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.022451
chr8	94719703	94793836	94756769	ENSG00000156162.16	+	protein_coding	KNOWN	DPY19L4	8	19	-0.042176
chr8	94791643	94793106	94792374	ENSG00000254307.2	-	antisense	KNOWN	KB-1608C10.2	2	2	-0.516650
chr8	94813311	94881746	94847528	ENSG00000164941.13	+	protein_coding	KNOWN	INTS8	20	29	-0.026577
chr8	94879770	94896678	94888224	ENSG00000175305.16	-	protein_coding	KNOWN	CCNE2	9	12	-0.148870
chr8	94884609	94885070	94884839	ENSG00000272509.1	+	antisense	KNOWN	RP11-347C18.5	1	1	0.024878
chr8	94891239	94892107	94891673	ENSG00000243979.2	+	processed_pseudogene	KNOWN	RP11-347C18.1	1	2	-0.414968
chr8	94895767	95116455	95006111	ENSG00000156170.12	+	protein_coding	KNOWN	NDUFAF6	18	15	0.020120
chr8	94925972	94949411	94937691	ENSG00000164938.13	-	protein_coding	KNOWN	TP53INP1	2	5	0.081355
chr8	94950037	94951396	94950716	ENSG00000253878.5	+	sense_intronic	KNOWN	RP11-347C18.3	2	3	0.352381
chr8	94974573	94974853	94974713	ENSG00000253528.2	-	processed_pseudogene	KNOWN	RP11-347C18.4	1	1	0.024176
chr8	95055214	95055320	95055267	ENSG00000200525.1	+	snRNA	KNOWN	RNU6-1209P	1	1	-0.164981
chr8	95066808	95073182	95069995	ENSG00000245080.5	-	antisense	KNOWN	RP11-320N21.1	2	2	-0.045132
chr8	95071732	95087924	95079828	ENSG00000254248.1	-	antisense	KNOWN	RP11-320N21.2	1	4	0.075019
chr8	95072911	95072996	95072953	ENSG00000275241.1	-	miRNA	KNOWN	MIR3150B	1	1	0.075019
chr8	95133804	95156684	95145244	ENSG00000175895.3	+	protein_coding	KNOWN	PLEKHF2	2	2	-0.270499
chr8	95204456	95810136	95507296	ENSG00000253773.2	+	lincRNA	KNOWN	C8orf37-AS1	4	5	-0.297400
chr8	95207007	95216374	95211690	ENSG00000253351.1	-	lincRNA	KNOWN	LINC01298	1	3	0.097970
chr8	95244919	95269201	95257060	ENSG00000156172.5	-	protein_coding	KNOWN	C8orf37	1	6	0.003216
chr8	95269616	95269738	95269677	ENSG00000281115.1	-	miRNA	NOVEL	AC024995.1	1	1	0.038880
chr8	95403802	95403894	95403848	ENSG00000253945.1	+	processed_pseudogene	KNOWN	RP11-328L11.1	1	1	-0.423597
chr8	95505406	95527524	95516465	ENSG00000253872.1	+	lincRNA	KNOWN	RP11-90D11.1	1	5	-0.587266
chr8	95599114	95599219	95599166	ENSG00000202112.1	+	snRNA	KNOWN	RNU6-690P	1	1	-0.405508
chr8	95678838	95678915	95678876	ENSG00000223297.1	-	miRNA	NOVEL	AC116154.1	1	1	-0.030264
chr8	95947781	95948233	95948007	ENSG00000254079.1	-	processed_pseudogene	KNOWN	RP11-31K23.1	1	1	-0.432923
chr8	95986108	95993103	95989605	ENSG00000248762.2	-	lincRNA	KNOWN	RP11-31K23.2	1	2	-0.486401
chr8	96068729	96069681	96069205	ENSG00000183663.6	-	processed_pseudogene	KNOWN	RP11-44N17.1	1	1	-0.426475
chr8	96126967	96127801	96127384	ENSG00000271349.1	-	processed_pseudogene	KNOWN	RP11-44N17.2	1	1	-0.258915
chr8	96140572	96140944	96140758	ENSG00000270131.1	-	lincRNA	KNOWN	KB-1043D8.8	1	1	-0.359388
chr8	96142330	96160792	96151561	ENSG00000156466.9	-	protein_coding	KNOWN	GDF6	3	4	-0.241761
chr8	96225920	96235634	96230777	ENSG00000156467.9	-	protein_coding	KNOWN	UQCRB	9	5	-0.026872
chr8	96235427	96238034	96236730	ENSG00000254224.1	+	antisense	KNOWN	KB-1043D8.6	1	3	0.127397
chr8	96239398	96261610	96250504	ENSG00000156469.8	-	protein_coding	KNOWN	MTERF3	5	9	-0.102499
chr8	96261715	96336995	96299355	ENSG00000156471.12	+	protein_coding	KNOWN	PTDSS1	6	13	0.174726
chr8	96309221	96309322	96309271	ENSG00000199732.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.360481
chr8	96371865	96387438	96379651	ENSG00000253105.5	-	lincRNA	KNOWN	KB-1448A5.1	2	3	0.043357
chr8	96431054	96431160	96431107	ENSG00000202095.1	-	snRNA	KNOWN	RNU6-1172P	1	1	-0.245878
chr8	96493351	96611780	96552565	ENSG00000169439.11	+	protein_coding	KNOWN	SDC2	8	5	-0.057824
chr8	96645227	97149654	96897440	ENSG00000104324.15	+	protein_coding	KNOWN	CPQ	9	8	-0.179111
chr8	97132835	97133379	97133107	ENSG00000272249.1	-	antisense	KNOWN	KB-1958F4.2	1	1	-0.190151
chr8	97144170	97144723	97144446	ENSG00000270077.1	+	sense_intronic	KNOWN	KB-1958F4.1	1	1	-0.190151
chr8	97241742	97242204	97241973	ENSG00000260640.1	-	lincRNA	KNOWN	KB-1000E4.2	1	1	-0.327722
chr8	97273474	97277964	97275719	ENSG00000180543.4	-	protein_coding	KNOWN	TSPYL5	1	1	0.125350
chr8	97358265	97358478	97358371	ENSG00000207215.2	+	snoRNA	NOVEL	U3	1	1	-0.364724
chr8	97624203	97625079	97624641	ENSG00000213750.4	-	processed_pseudogene	KNOWN	KB-1683C8.1	1	1	0.169068
chr8	97644179	97728770	97686474	ENSG00000147649.9	+	protein_coding	KNOWN	MTDH	6	12	0.104012
chr8	97772313	97772425	97772369	ENSG00000202399.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.608670
chr8	97775057	97853013	97814035	ENSG00000104341.16	+	protein_coding	KNOWN	LAPTM4B	4	7	0.155751
chr8	97788210	97788357	97788283	ENSG00000270682.1	-	processed_pseudogene	KNOWN	KB-1907C4.2	1	1	0.608670
chr8	97853021	97853253	97853137	ENSG00000270861.1	-	processed_pseudogene	KNOWN	KB-1589B1.4	1	1	-0.076984
chr8	97858049	97858947	97858498	ENSG00000253639.1	-	processed_pseudogene	KNOWN	SUMO2P18	1	4	-0.076984
chr8	97865054	97865485	97865269	ENSG00000243504.1	+	processed_pseudogene	KNOWN	RPS23P1	1	1	-0.076984
chr8	97868840	98036716	97952778	ENSG00000132561.13	+	protein_coding	KNOWN	MATN2	18	19	0.202694
chr8	98024851	98046469	98035660	ENSG00000156482.10	-	protein_coding	KNOWN	RPL30	13	5	0.176861
chr8	98041726	98044121	98042923	ENSG00000245970.2	+	antisense	KNOWN	KB-1208A12.3	1	2	0.091992
chr8	98042086	98042217	98042151	ENSG00000207067.1	-	snoRNA	KNOWN	SNORA72	1	1	0.091992
chr8	98048856	98048962	98048909	ENSG00000252755.1	+	snRNA	KNOWN	RNU6-703P	1	1	0.091992
chr8	98064311	98093610	98078960	ENSG00000177459.10	+	protein_coding	KNOWN	ERICH5	2	3	0.053689
chr8	98102344	98117241	98109792	ENSG00000132541.10	-	protein_coding	KNOWN	HRSP12	6	6	0.008663
chr8	98117297	98159834	98138565	ENSG00000104356.10	+	protein_coding	KNOWN	POP1	4	16	0.192193
chr8	98189833	98294393	98242113	ENSG00000104361.9	-	protein_coding	KNOWN	NIPAL2	8	12	-0.062832
chr8	98192205	98192313	98192259	ENSG00000252558.1	-	snRNA	KNOWN	RNU6-914P	1	1	0.047824
chr8	98371355	98388247	98379801	ENSG00000254267.1	-	lincRNA	KNOWN	KB-1458E12.1	1	3	0.091992
chr8	98391401	98391514	98391457	ENSG00000278914.1	-	TEC	KNOWN	KB-1517D11.3	1	1	0.301026
chr8	98401403	98942827	98672115	ENSG00000104375.15	-	protein_coding	KNOWN	STK3	18	13	-0.088103
chr8	98412882	98413784	98413333	ENSG00000253468.1	-	processed_pseudogene	KNOWN	KB-1517D11.2	1	2	0.055650
chr8	98427022	98432848	98429935	ENSG00000156486.7	+	protein_coding	KNOWN	KCNS2	2	2	0.267219
chr8	98436669	98439290	98437979	ENSG00000272321.1	+	antisense	KNOWN	KB-1517D11.4	1	1	0.488293
chr8	98462944	98463050	98462997	ENSG00000207378.1	-	snRNA	KNOWN	RNU6-748P	1	1	-0.095868
chr8	98603253	98606340	98604796	ENSG00000253911.1	+	antisense	KNOWN	KB-1205A7.2	1	2	-0.134436
chr8	98633547	98633865	98633706	ENSG00000254112.1	+	processed_pseudogene	KNOWN	KB-1205A7.1	1	1	0.166954
chr8	98782055	98782628	98782341	ENSG00000240870.2	+	processed_pseudogene	KNOWN	RPL19P14	1	1	-0.123986
chr8	98904603	98905671	98905137	ENSG00000253415.1	-	processed_pseudogene	KNOWN	RP11-44N12.4	1	1	-0.278377
chr8	98906260	98906517	98906388	ENSG00000254312.1	-	processed_pseudogene	KNOWN	MRPL57P7	1	1	-0.278377
chr8	98921233	98921550	98921391	ENSG00000223281.1	-	misc_RNA	KNOWN	RN7SKP85	1	1	-0.056710
chr8	98943595	98944098	98943846	ENSG00000271930.1	+	lincRNA	KNOWN	RP11-44N12.5	1	1	0.021602
chr8	98944403	98952104	98948253	ENSG00000164920.9	+	protein_coding	KNOWN	OSR2	10	5	0.143740
chr8	98961428	98968284	98964856	ENSG00000229625.3	+	lincRNA	KNOWN	RP11-44N12.2	1	3	0.468434
chr8	98996763	99013044	99004903	ENSG00000253948.1	-	lincRNA	KNOWN	RP11-410L14.2	1	2	-0.134865
chr8	98999284	98999401	98999342	ENSG00000263842.1	+	miRNA	NOVEL	AC104986.1	1	1	-0.122133
chr8	99003407	99003842	99003624	ENSG00000253180.1	-	processed_pseudogene	KNOWN	RP11-410L14.1	1	1	-0.122133
chr8	99013266	99877580	99445423	ENSG00000132549.18	+	protein_coding	KNOWN	VPS13B	12	62	-0.172034
chr8	99091738	99094060	99092899	ENSG00000253562.1	-	antisense	KNOWN	CTD-2340D6.2	1	2	-0.116955
chr8	99119352	99120581	99119966	ENSG00000253532.1	+	sense_intronic	KNOWN	CTD-2340D6.1	1	2	-0.062894
chr8	99233048	99234459	99233753	ENSG00000236583.1	-	processed_pseudogene	KNOWN	AP004290.1	1	1	-0.207568
chr8	99340305	99341761	99341033	ENSG00000237704.1	-	processed_pseudogene	KNOWN	AP004289.2	1	1	-0.355467
chr8	99346052	99348256	99347154	ENSG00000225017.1	-	processed_pseudogene	KNOWN	AP004289.1	1	1	-0.355467
chr8	99527826	99527927	99527876	ENSG00000206699.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.433328
chr8	99536636	99536730	99536683	ENSG00000207804.1	-	miRNA	KNOWN	MIR599	1	1	-0.449381
chr8	99536786	99536861	99536823	ENSG00000216069.1	-	miRNA	KNOWN	MIR875	1	1	-0.449381
chr8	99613783	99614081	99613932	ENSG00000243254.3	-	misc_RNA	KNOWN	RN7SL350P	1	1	0.008936
chr8	99695957	99698017	99696987	ENSG00000235683.1	+	processed_pseudogene	KNOWN	AC018442.1	1	1	-0.105454
chr8	99796615	99799187	99797901	ENSG00000253539.1	-	antisense	KNOWN	RP11-402L5.1	1	2	0.160939
chr8	99804159	99804341	99804250	ENSG00000253912.1	-	processed_pseudogene	KNOWN	RP11-402L5.2	1	1	0.160939
chr8	99873200	99894062	99883631	ENSG00000164919.10	-	protein_coding	KNOWN	COX6C	11	5	-0.128397
chr8	99960936	100131268	100046102	ENSG00000132554.19	-	protein_coding	KNOWN	RGS22	18	30	-0.378483
chr8	100004583	100004649	100004616	ENSG00000212414.1	+	snoRNA	NOVEL	SNORD77	1	1	-0.672792
chr8	100023982	100024084	100024033	ENSG00000221753.1	-	miRNA	KNOWN	MIR1273A	1	1	-0.391610
chr8	100133360	100145800	100139580	ENSG00000156509.13	-	protein_coding	KNOWN	FBXO43	3	5	-0.705819
chr8	100150584	100154002	100152293	ENSG00000147669.10	+	protein_coding	KNOWN	POLR2K	3	4	0.084130
chr8	100157906	100259278	100208592	ENSG00000104450.12	+	protein_coding	KNOWN	SPAG1	7	19	-0.073986
chr8	100158868	100158975	100158921	ENSG00000202310.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.084130
chr8	100165226	100165478	100165352	ENSG00000253299.1	-	processed_pseudogene	KNOWN	RP11-316J7.4	1	1	0.084130
chr8	100185138	100185239	100185188	ENSG00000199667.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.264801
chr8	100257059	100410015	100333537	ENSG00000034677.11	-	protein_coding	KNOWN	RNF19A	16	11	-0.201184
chr8	100337595	100350707	100344151	ENSG00000253217.1	+	lincRNA	KNOWN	KB-1991G8.1	1	2	-0.441641
chr8	100381260	100414459	100397859	ENSG00000253824.1	-	lincRNA	KNOWN	KB-173C10.2	2	3	-0.334465
chr8	100382763	100382845	100382804	ENSG00000265599.1	+	miRNA	KNOWN	MIR4471	1	1	-0.355467
chr8	100428834	100430997	100429915	ENSG00000253842.1	-	lincRNA	KNOWN	KB-173C10.1	2	2	0.156696
chr8	100475675	100501148	100488411	ENSG00000253666.1	+	antisense	KNOWN	KB-1615E4.2	2	2	0.078232
chr8	100492528	100493713	100493120	ENSG00000254364.1	+	antisense	KNOWN	KB-1615E4.3	1	2	0.355026
chr8	100509752	100559784	100534768	ENSG00000186106.11	-	protein_coding	KNOWN	ANKRD46	11	6	-0.113303
chr8	100550724	100551713	100551218	ENSG00000251013.1	-	processed_pseudogene	KNOWN	GAPDHP62	1	1	0.031238
chr8	100572882	100663415	100618148	ENSG00000174226.8	-	protein_coding	KNOWN	SNX31	7	14	0.029495
chr8	100618581	100619993	100619287	ENSG00000253740.5	+	antisense	KNOWN	KB-1083B1.1	2	3	0.076138
chr8	100683488	100683574	100683531	ENSG00000252764.1	+	snRNA	KNOWN	RNU6-1092P	1	1	0.248496
chr8	100685816	100722809	100704312	ENSG00000070756.13	-	protein_coding	KNOWN	PABPC1	24	16	0.243639
chr8	100702968	100703024	100702996	ENSG00000277719.1	-	miRNA	KNOWN	MIR7705	1	1	0.301445
chr8	100707878	100707963	100707920	ENSG00000264991.1	-	miRNA	NOVEL	AP001205.1	1	1	0.301445
chr8	100739802	100739927	100739864	ENSG00000221527.1	-	snRNA	KNOWN	RNU6ATAC41P	1	1	0.396846
chr8	100755099	100755195	100755147	ENSG00000202001.2	-	misc_RNA	NOVEL	Y_RNA	1	1	0.468297
chr8	100776512	100776865	100776688	ENSG00000242399.1	-	processed_pseudogene	KNOWN	RPS20P23	1	1	0.287656
chr8	100831728	100831860	100831794	ENSG00000222795.1	-	snRNA	KNOWN	RNU4-83P	1	1	0.284637
chr8	100895771	100896118	100895944	ENSG00000212994.5	+	processed_pseudogene	KNOWN	RPS26P6	1	1	0.341606
chr8	100897853	100898136	100897994	ENSG00000275041.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.341606
chr8	100913247	100914388	100913817	ENSG00000260368.1	-	sense_overlapping	KNOWN	RP11-521I2.3	1	1	0.123356
chr8	100916525	100953388	100934956	ENSG00000164924.17	-	protein_coding	KNOWN	YWHAZ	23	7	0.203056
chr8	100957883	100958180	100958031	ENSG00000242315.3	+	misc_RNA	KNOWN	RN7SL685P	1	1	0.082947
chr8	101052054	101076251	101064152	ENSG00000248599.1	+	lincRNA	KNOWN	FLJ42969	1	3	0.313768
chr8	101122145	101126158	101124151	ENSG00000253395.1	-	lincRNA	KNOWN	KB-1460A1.1	1	3	0.261917
chr8	101128987	101133486	101131236	ENSG00000253355.1	+	processed_transcript	KNOWN	KB-1460A1.2	2	3	0.500168
chr8	101137959	101138313	101138136	ENSG00000202360.1	+	misc_RNA	KNOWN	RN7SKP249	1	1	0.569314
chr8	101139665	101140929	101140297	ENSG00000253737.1	+	lincRNA	KNOWN	KB-1460A1.3	1	3	0.569314
chr8	101166805	101169629	101168217	ENSG00000261087.1	-	lincRNA	KNOWN	KB-1460A1.5	1	1	0.162381
chr8	101177878	101206193	101192035	ENSG00000120963.11	-	protein_coding	KNOWN	ZNF706	15	6	0.175256
chr8	101208148	101208558	101208353	ENSG00000271882.1	+	lincRNA	KNOWN	KB-1410C5.5	1	1	0.074714
chr8	101223941	101224573	101224257	ENSG00000253942.1	-	processed_pseudogene	KNOWN	KB-1410C5.1	1	1	-0.303417
chr8	101261541	101262903	101262222	ENSG00000253679.1	-	lincRNA	KNOWN	KB-1410C5.2	1	2	0.077119
chr8	101287445	101293783	101290614	ENSG00000253282.1	+	lincRNA	KNOWN	KB-1410C5.3	1	3	0.162948
chr8	101307367	101307428	101307397	ENSG00000239115.1	+	snRNA	KNOWN	RNU7-67P	1	1	0.070827
chr8	101337496	101337649	101337572	ENSG00000271560.1	+	processed_pseudogene	KNOWN	KB-1410C5.4	1	1	0.192059
chr8	101361794	101372707	101367250	ENSG00000228224.3	+	transcribed_processed_pseudogene	KNOWN	NACAP1	2	4	0.148876
chr8	101366417	101367005	101366711	ENSG00000254063.2	-	unprocessed_pseudogene	KNOWN	DUXAP2	1	1	0.123019
chr8	101387299	101393186	101390242	ENSG00000253644.1	-	lincRNA	KNOWN	KB-1930G5.3	1	3	0.154012
chr8	101397636	101397933	101397784	ENSG00000239211.3	-	misc_RNA	KNOWN	RN7SL563P	1	1	0.091992
chr8	101411873	101452452	101432162	ENSG00000254084.1	-	lincRNA	KNOWN	KB-1930G5.4	1	2	0.130284
chr8	101461177	101492499	101476838	ENSG00000254024.1	-	antisense	KNOWN	KB-1562D12.1	1	2	0.064524
chr8	101492432	101669726	101581079	ENSG00000083307.10	+	protein_coding	KNOWN	GRHL2	6	16	0.007096
chr8	101528723	101529569	101529146	ENSG00000253991.1	-	processed_pseudogene	KNOWN	KB-1562D12.2	1	2	-0.210571
chr8	101562008	101562488	101562248	ENSG00000253153.1	-	processed_pseudogene	KNOWN	KB-1562D12.3	1	1	-0.210037
chr8	101686543	102124907	101905725	ENSG00000104490.17	-	protein_coding	KNOWN	NCALD	30	7	-0.057010
chr8	101686547	101689093	101687820	ENSG00000253629.1	+	antisense	KNOWN	KB-1107E3.1	1	2	0.038973
chr8	101847256	101847360	101847308	ENSG00000238372.1	-	snoRNA	NOVEL	snoU13	1	1	0.171281
chr8	101871830	101872549	101872189	ENSG00000282989.1	-	processed_pseudogene	KNOWN	KB-1396H2.2	1	1	-0.116407
chr8	102125432	102125515	102125473	ENSG00000266756.1	+	miRNA	KNOWN	MIR5680	1	1	0.083222
chr8	102154550	102154725	102154637	ENSG00000254492.1	+	processed_pseudogene	KNOWN	KB-1073A2.1	1	1	-0.351310
chr8	102204502	102239118	102221810	ENSG00000048392.11	-	protein_coding	KNOWN	RRM2B	11	11	-0.046338
chr8	102239394	102253333	102246363	ENSG00000246263.2	+	antisense	KNOWN	UBR5-AS1	2	3	0.201163
chr8	102242040	102242619	102242329	ENSG00000253328.2	-	unprocessed_pseudogene	KNOWN	SUMO2P19	1	2	0.238310
chr8	102253012	102412841	102332926	ENSG00000104517.12	-	protein_coding	KNOWN	UBR5	13	59	0.027987
chr8	102256392	102257821	102257106	ENSG00000272037.1	+	antisense	KNOWN	KB-431C1.5	1	1	0.083003
chr8	102417979	102418953	102418466	ENSG00000253923.2	+	processed_pseudogene	KNOWN	KB-1980E6.2	1	1	0.337971
chr8	102421197	102421322	102421259	ENSG00000221387.1	+	snRNA	KNOWN	RNU6ATAC8P	1	1	0.337971
chr8	102451763	102452483	102452123	ENSG00000271612.1	+	processed_pseudogene	KNOWN	HSPE1P14	1	2	0.242234
chr8	102503753	102504137	102503945	ENSG00000240724.2	+	processed_pseudogene	KNOWN	RPS12P15	1	1	-0.048489
chr8	102521867	102521977	102521922	ENSG00000274329.1	+	miRNA	NOVEL	AP002852.1	1	1	0.021982
chr8	102528740	102538668	102533704	ENSG00000253633.1	+	lincRNA	KNOWN	KB-1980E6.3	2	4	0.026557
chr8	102533241	102533339	102533290	ENSG00000252593.1	-	snRNA	KNOWN	RNU6-1224P	1	1	0.027222
chr8	102551572	102561017	102556294	ENSG00000155087.3	+	protein_coding	KNOWN	ODF1	2	2	0.042604
chr8	102621509	102622331	102621920	ENSG00000253382.3	-	processed_pseudogene	KNOWN	POU5F1P2	1	1	0.315463
chr8	102648779	102655902	102652340	ENSG00000155090.14	-	protein_coding	KNOWN	KLF10	2	4	0.213965
chr8	102688317	102688906	102688611	ENSG00000250684.4	-	processed_pseudogene	KNOWN	KB-1042C11.1	1	2	0.068659
chr8	102733635	102733719	102733677	ENSG00000266799.1	-	miRNA	NOVEL	AP003356.1	1	1	0.201063
chr8	102805517	102809971	102807744	ENSG00000253669.3	+	lincRNA	KNOWN	KB-1732A1.1	2	2	0.177299
chr8	102826357	102893864	102860110	ENSG00000155096.13	-	protein_coding	KNOWN	AZIN1	10	13	0.113198
chr8	102854455	102856075	102855265	ENSG00000253385.1	+	lincRNA	KNOWN	KB-1254G8.1	1	2	0.074398
chr8	102864300	102977876	102921088	ENSG00000253320.5	+	antisense	KNOWN	AZIN1-AS1	16	4	0.080602
chr8	102891876	102893608	102892742	ENSG00000253263.1	+	lincRNA	KNOWN	KB-1507C5.3	1	2	0.194475
chr8	102923371	102924255	102923813	ENSG00000244052.1	-	processed_pseudogene	KNOWN	RPL5P24	1	1	0.009998
chr8	102950467	102950564	102950515	ENSG00000201216.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.039605
chr8	102960813	102960920	102960866	ENSG00000265898.1	-	miRNA	NOVEL	AP003354.1	1	1	-0.039605
chr8	102978785	103000184	102989484	ENSG00000254281.1	+	lincRNA	KNOWN	KB-1507C5.4	1	4	-0.109258
chr8	103016744	103017589	103017166	ENSG00000253663.1	+	processed_pseudogene	KNOWN	NPM1P52	1	1	0.125350
chr8	103020187	103021428	103020807	ENSG00000254236.1	-	antisense	KNOWN	KB-1639H6.2	1	2	0.125350
chr8	103021063	103073051	103047057	ENSG00000155097.11	+	protein_coding	KNOWN	ATP6V1C1	6	13	-0.115796
chr8	103085651	103086590	103086120	ENSG00000253795.1	+	processed_pseudogene	KNOWN	MTND1P5	1	1	0.222839
chr8	103088796	103090671	103089733	ENSG00000253556.1	+	processed_pseudogene	KNOWN	MTCO1P4	1	2	0.111439
chr8	103091263	103091509	103091386	ENSG00000253977.1	+	processed_pseudogene	KNOWN	MTCO2P4	1	1	-0.087987
chr8	103092624	103092721	103092672	ENSG00000265667.1	-	miRNA	NOVEL	AP003550.1	1	1	-0.087987
chr8	103121032	103132966	103126999	ENSG00000250929.2	+	antisense	KNOWN	LINC01181	1	2	0.154019
chr8	103132963	103141475	103137219	ENSG00000236939.2	-	antisense	KNOWN	BAALC-AS2	2	2	0.099187
chr8	103140710	103230305	103185507	ENSG00000164929.16	+	protein_coding	KNOWN	BAALC	9	4	0.018300
chr8	103154614	103154689	103154651	ENSG00000265657.1	+	miRNA	KNOWN	MIR3151	1	1	0.176205
chr8	103156990	103298772	103227881	ENSG00000247081.7	-	antisense	KNOWN	BAALC-AS1	10	6	-0.026256
chr8	103228425	103229314	103228869	ENSG00000253851.1	-	antisense	KNOWN	RP11-318M2.3	1	2	-0.199057
chr8	103298433	103332866	103315649	ENSG00000164930.11	+	protein_coding	KNOWN	FZD6	7	8	-0.043931
chr8	103371515	103382997	103377256	ENSG00000164932.12	+	protein_coding	KNOWN	CTHRC1	4	4	-0.014923
chr8	103383078	103383854	103383466	ENSG00000266289.1	-	lincRNA	KNOWN	RP11-1C8.6	1	1	-0.014923
chr8	103384961	103385067	103385014	ENSG00000207399.1	+	snRNA	KNOWN	RNU6-1011P	1	1	-0.014923
chr8	103398635	103415189	103406912	ENSG00000164933.11	-	protein_coding	KNOWN	SLC25A32	5	7	0.004669
chr8	103414714	103443453	103429083	ENSG00000164934.13	+	protein_coding	KNOWN	DCAF13	10	11	-0.372549
chr8	103464389	103468985	103466687	ENSG00000261670.1	+	lincRNA	KNOWN	RP11-1C8.5	1	1	-0.309822
chr8	103481266	103481619	103481442	ENSG00000271830.1	-	lincRNA	KNOWN	RP11-1C8.7	1	1	-0.556747
chr8	103483398	103501676	103492537	ENSG00000253477.5	-	antisense	KNOWN	RP11-1C8.4	2	5	-0.273740
chr8	103500748	104256094	103878421	ENSG00000176406.20	+	protein_coding	KNOWN	RIMS2	16	29	-0.634823
chr8	103559099	103559389	103559244	ENSG00000255105.1	-	processed_pseudogene	KNOWN	RP11-5A11.1	1	1	-0.375614
chr8	103568603	103568978	103568790	ENSG00000254644.1	-	processed_pseudogene	KNOWN	RP11-5A11.2	1	1	-0.375614
chr8	103768281	103769029	103768655	ENSG00000239344.1	+	processed_pseudogene	KNOWN	RP11-771F20.1	1	1	-0.375401
chr8	104330324	104467053	104398688	ENSG00000147647.12	-	protein_coding	KNOWN	DPYS	8	10	-0.052246
chr8	104339087	104356689	104347888	ENSG00000164935.6	+	protein_coding	KNOWN	DCSTAMP	8	4	0.179544
chr8	104419512	104421500	104420506	ENSG00000179577.3	-	sense_intronic	KNOWN	KB-1552D7.2	2	2	-0.142473
chr8	104425359	104425438	104425398	ENSG00000222158.1	+	miRNA	NOVEL	AP003471.1	1	1	-0.142473
chr8	104435453	104435546	104435499	ENSG00000266734.1	-	miRNA	NOVEL	AP003471.2	1	1	-0.210571
chr8	104478539	104480783	104479661	ENSG00000279138.1	-	TEC	KNOWN	KB-1742H10.3	1	1	-0.228049
chr8	104484369	104484465	104484417	ENSG00000208032.1	-	miRNA	KNOWN	MIR548A3	1	1	-0.228049
chr8	104489231	104589024	104539127	ENSG00000147650.11	-	protein_coding	KNOWN	LRP12	7	7	-0.329138
chr8	104566086	104566429	104566257	ENSG00000253454.1	+	processed_pseudogene	KNOWN	NDUFA5P2	1	1	-0.352310
chr8	104590733	105804532	105197632	ENSG00000169946.13	+	protein_coding	KNOWN	ZFPM2	10	8	-0.492486
chr8	104981164	104981579	104981371	ENSG00000243939.1	-	processed_pseudogene	KNOWN	RP11-200A13.1	1	1	-0.123176
chr8	104990308	104990692	104990500	ENSG00000253997.1	-	processed_pseudogene	KNOWN	RP11-200A13.3	1	1	-0.390160
chr8	105011107	105011568	105011337	ENSG00000240271.1	+	processed_pseudogene	KNOWN	RP11-200A13.2	1	1	-0.450326
chr8	105142860	105188606	105165733	ENSG00000254041.1	-	antisense	KNOWN	RP11-574O7.1	1	3	-0.589949
chr8	105194990	105196969	105195979	ENSG00000253318.1	-	processed_pseudogene	KNOWN	TMCC1P1	1	1	-0.474708
chr8	105271505	105271605	105271555	ENSG00000280925.1	-	miRNA	NOVEL	AC041039.1	1	1	-0.360520
chr8	105287830	105288365	105288097	ENSG00000243171.1	-	processed_pseudogene	KNOWN	RP11-273P3.1	1	1	-0.360520
chr8	105662352	105685765	105674058	ENSG00000253420.1	-	antisense	KNOWN	RP11-642D21.2	1	3	-0.885555
chr8	105669991	105679031	105674511	ENSG00000254141.1	+	sense_intronic	KNOWN	RP11-642D21.1	1	3	-1.137330
chr8	105737280	105737765	105737522	ENSG00000243601.1	-	processed_pseudogene	KNOWN	RPL12P24	1	1	-0.715363
chr8	105780246	106060524	105920385	ENSG00000251003.7	-	processed_transcript	KNOWN	ZFPM2-AS1	7	6	-0.410694
chr8	105826570	105834038	105830304	ENSG00000253526.1	+	lincRNA	KNOWN	RP11-152P17.3	1	2	-0.410420
chr8	105929126	105929238	105929182	ENSG00000201627.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.334823
chr8	106215763	106217218	106216490	ENSG00000213708.6	+	unprocessed_pseudogene	KNOWN	SLC16A14P1	1	2	-0.111292
chr8	106265435	106268741	106267088	ENSG00000254021.1	-	lincRNA	KNOWN	RP11-778D12.2	1	2	-0.492971
chr8	106270144	106272899	106271521	ENSG00000254615.2	+	lincRNA	KNOWN	RP11-395G23.3	2	2	-0.323046
chr8	106270178	106752694	106511436	ENSG00000164830.17	+	protein_coding	KNOWN	OXR1	17	17	-0.373644
chr8	106520474	106657548	106589011	ENSG00000253582.1	-	antisense	KNOWN	RP11-649G15.2	1	4	-0.390750
chr8	106697427	106698013	106697720	ENSG00000253676.1	-	processed_pseudogene	KNOWN	TAGLN2P1	1	1	-0.456212
chr8	106729795	106729856	106729825	ENSG00000251892.1	-	snRNA	KNOWN	RNU7-84P	1	1	-0.632374
chr8	106759483	106770245	106764864	ENSG00000174429.3	-	protein_coding	KNOWN	ABRA	1	2	-0.402513
chr8	106980967	106981571	106981269	ENSG00000275905.1	-	unprocessed_pseudogene	KNOWN	KB-1433G4.1	1	1	-0.255932
chr8	107173200	107173809	107173504	ENSG00000254146.1	-	processed_pseudogene	KNOWN	HMGB1P46	1	1	-0.395123
chr8	107249482	107498055	107373768	ENSG00000154188.9	-	protein_coding	KNOWN	ANGPT1	8	9	-0.228750
chr8	107254407	107254498	107254452	ENSG00000211995.1	-	miRNA	NOVEL	AP000428.1	1	1	0.101270
chr8	107647279	107648032	107647655	ENSG00000248838.2	+	processed_pseudogene	KNOWN	PGAM1P13	1	1	-0.380944
chr8	107884494	107884611	107884552	ENSG00000200806.1	+	rRNA	KNOWN	RNA5SP275	1	1	-0.461162
chr8	107899316	108083648	107991482	ENSG00000147655.10	-	protein_coding	KNOWN	RSPO2	8	6	-0.401517
chr8	107983116	107983965	107983540	ENSG00000253228.1	+	processed_pseudogene	KNOWN	NRBF2P4	1	1	-0.497220
chr8	108131100	108132114	108131607	ENSG00000230948.1	-	processed_pseudogene	KNOWN	AP001331.1	1	1	-0.061718
chr8	108201216	108435333	108318274	ENSG00000104408.9	-	protein_coding	KNOWN	EIF3E	18	13	-0.434557
chr8	108226200	108227544	108226872	ENSG00000253754.1	+	antisense	KNOWN	RP11-35G22.1	1	2	0.014587
chr8	108378831	108379545	108379188	ENSG00000243287.2	-	processed_pseudogene	KNOWN	RPS17P14	1	2	-0.325928
chr8	108443601	108486918	108465259	ENSG00000104412.7	+	protein_coding	KNOWN	EMC2	7	11	-0.350392
chr8	108572643	108573174	108572908	ENSG00000253657.1	+	processed_pseudogene	KNOWN	RP11-25P11.2	1	1	-0.295031
chr8	108581062	108626767	108603914	ENSG00000253949.1	+	lincRNA	KNOWN	RP11-790J24.1	1	3	-0.500593
chr8	108606850	108787615	108697232	ENSG00000164841.4	-	protein_coding	KNOWN	TMEM74	2	4	-0.589675
chr8	108652373	108653315	108652844	ENSG00000253580.1	+	processed_pseudogene	KNOWN	RP11-790J24.2	1	1	-0.577184
chr8	108895029	109063417	108979223	ENSG00000253796.1	-	antisense	KNOWN	RP11-1084E5.1	2	5	-0.578801
chr8	109086621	109119584	109103102	ENSG00000174417.2	+	protein_coding	KNOWN	TRHR	2	3	-0.534336
chr8	109240919	109334385	109287652	ENSG00000120526.10	-	protein_coding	KNOWN	NUDCD1	4	11	-0.419073
chr8	109298598	109316513	109307555	ENSG00000250267.2	+	antisense	KNOWN	RP11-122A21.2	1	2	-0.433883
chr8	109334324	109345953	109340138	ENSG00000120533.12	+	protein_coding	KNOWN	ENY2	16	6	-0.446428
chr8	109362477	109530330	109446403	ENSG00000205038.11	+	protein_coding	KNOWN	PKHD1L1	4	78	-0.632218
chr8	109470131	109471117	109470624	ENSG00000254185.1	+	processed_pseudogene	KNOWN	RP11-419L20.2	1	1	-0.564276
chr8	109539711	109565996	109552853	ENSG00000147654.14	+	protein_coding	KNOWN	EBAG9	10	8	-0.347974
chr8	109573978	109691791	109632884	ENSG00000147642.16	-	protein_coding	KNOWN	SYBU	38	9	-0.353020
chr8	109644115	109648084	109646099	ENSG00000248050.1	+	antisense	KNOWN	RP11-422N16.3	1	2	-0.299776
chr8	109777912	109782288	109780100	ENSG00000255099.1	+	processed_pseudogene	KNOWN	RP11-25D10.2	1	2	-0.601677
chr8	109899246	109899762	109899504	ENSG00000241385.1	-	processed_pseudogene	KNOWN	RP11-25D10.1	1	1	-0.589326
chr8	109963645	109975847	109969746	ENSG00000164794.8	-	protein_coding	KNOWN	KCNV1	2	4	-0.639717
chr8	109973943	109974781	109974362	ENSG00000255402.1	+	antisense	KNOWN	RP11-696P8.2	1	2	-0.413536
chr8	110105076	110105964	110105520	ENSG00000240590.1	-	processed_pseudogene	KNOWN	RPSAP48	1	1	-0.497543
chr8	110334743	110349607	110342175	ENSG00000253956.1	-	lincRNA	KNOWN	RP11-211F2.1	1	3	-0.992072
chr8	110555408	110556518	110555963	ENSG00000253107.1	+	processed_pseudogene	KNOWN	CTD-2544L4.1	1	1	-0.631491
chr8	110609241	110632394	110620817	ENSG00000253122.1	+	lincRNA	KNOWN	RP11-238I10.1	1	3	-0.971125
chr8	110766863	110772759	110769811	ENSG00000253717.1	+	lincRNA	KNOWN	KB-1299A7.2	1	2	-0.778093
chr8	110809394	110809894	110809644	ENSG00000253994.1	-	processed_pseudogene	KNOWN	KB-1299A7.1	1	1	-0.747072
chr8	110933263	110934533	110933898	ENSG00000254241.1	-	processed_pseudogene	KNOWN	RP11-946L20.1	1	1	-0.596064
chr8	110934669	110934731	110934700	ENSG00000273996.1	-	miRNA	NOVEL	AC104946.1	1	1	-0.596064
chr8	110937690	111027433	110982561	ENSG00000253877.5	-	lincRNA	KNOWN	LINC01608	2	6	-0.762316
chr8	111098961	111236203	111167582	ENSG00000253103.1	-	lincRNA	KNOWN	LINC01609	2	4	-0.640003
chr8	111179193	111179872	111179532	ENSG00000253489.1	-	lincRNA	KNOWN	RP11-114O8.1	1	2	-0.565120
chr8	111225585	111227049	111226317	ENSG00000254124.1	+	processed_pseudogene	KNOWN	EEF1A1P37	1	2	-0.448577
chr8	111376639	111542973	111459806	ENSG00000253434.5	+	lincRNA	KNOWN	RP11-1101K5.1	3	5	-0.659873
chr8	111380603	111380868	111380735	ENSG00000255033.1	+	processed_pseudogene	KNOWN	SERPINA15P	1	1	-0.533160
chr8	111621458	111621797	111621627	ENSG00000253156.1	-	processed_pseudogene	KNOWN	RP11-58O3.1	1	1	-0.241252
chr8	111742012	111756826	111749419	ENSG00000254262.1	+	lincRNA	KNOWN	RP11-58O3.2	2	4	-0.579577
chr8	112148742	112148825	112148783	ENSG00000222146.1	-	snRNA	KNOWN	RNU4-37P	1	1	-0.480998
chr8	112222928	113437099	112830013	ENSG00000164796.17	-	protein_coding	KNOWN	CSMD3	10	72	-0.765836
chr8	112475590	112475696	112475643	ENSG00000276813.1	-	miRNA	NOVEL	AC024996.1	1	1	-0.582608
chr8	112538889	112539317	112539103	ENSG00000230169.1	+	processed_pseudogene	KNOWN	RPL30P16	1	1	-0.429706
chr8	112643493	112643583	112643538	ENSG00000238399.1	+	miRNA	KNOWN	MIR2053	1	1	-0.477704
chr8	113190050	113190153	113190101	ENSG00000275892.1	-	miRNA	NOVEL	AC067903.1	1	1	-0.498896
chr8	113376669	113377227	113376948	ENSG00000227514.3	+	processed_pseudogene	KNOWN	RP11-709P2.1	1	2	-0.908008
chr8	113407527	113407594	113407560	ENSG00000221610.1	-	miRNA	NOVEL	AC107890.1	1	1	-0.811147
chr8	113600310	113616958	113608634	ENSG00000253207.3	+	lincRNA	KNOWN	RP11-67H2.1	2	2	-0.649434
chr8	113950886	113950998	113950942	ENSG00000206719.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.811500
chr8	114282067	114295839	114288953	ENSG00000254339.5	+	lincRNA	KNOWN	RP11-267L5.1	5	3	-0.498026
chr8	114318400	114318911	114318655	ENSG00000253499.2	-	processed_pseudogene	KNOWN	RP11-393K19.1	1	1	-0.743779
chr8	114791653	114791929	114791791	ENSG00000253756.1	-	processed_pseudogene	KNOWN	CARSP2	1	1	-0.457565
chr8	115408496	115809673	115609084	ENSG00000104447.11	-	protein_coding	KNOWN	TRPS1	11	7	-0.380765
chr8	115509602	115511325	115510463	ENSG00000227170.1	+	antisense	KNOWN	AF178030.2	1	2	-0.285165
chr8	115950511	116325059	116137785	ENSG00000249917.2	-	lincRNA	KNOWN	LINC00536	1	14	-0.406690
chr8	116022686	116022779	116022732	ENSG00000199450.1	-	rRNA	KNOWN	RNA5SP276	1	1	-0.440676
chr8	116136773	116136914	116136843	ENSG00000221793.1	+	miRNA	NOVEL	AC103863.1	1	1	-0.374093
chr8	116402543	116403757	116403150	ENSG00000253672.1	-	lincRNA	KNOWN	RP11-536K17.1	1	2	-0.258915
chr8	116642130	116766925	116704527	ENSG00000147677.10	-	protein_coding	KNOWN	EIF3H	12	10	-0.187210
chr8	116766503	116849463	116807983	ENSG00000147679.11	+	protein_coding	KNOWN	UTP23	9	4	-0.221435
chr8	116845935	116874866	116860400	ENSG00000164754.12	-	protein_coding	KNOWN	RAD21	10	14	-0.011057
chr8	116849884	116851073	116850478	ENSG00000281527.1	+	protein_coding	KNOWN	AC087350.1	1	4	-0.005599
chr8	116874424	116876868	116875646	ENSG00000253327.2	+	antisense	KNOWN	RAD21-AS1	1	2	0.082342
chr8	116874728	116874800	116874764	ENSG00000264875.1	-	miRNA	KNOWN	MIR3610	1	1	0.082342
chr8	116938199	116944487	116941343	ENSG00000205002.3	+	protein_coding	KNOWN	AARD	2	2	-0.320391
chr8	116950273	117176714	117063493	ENSG00000164756.12	+	protein_coding	KNOWN	SLC30A8	9	11	-0.456159
chr8	117017946	117018248	117018097	ENSG00000244033.3	+	misc_RNA	KNOWN	RN7SL228P	1	1	-0.488991
chr8	117055818	117056145	117055981	ENSG00000253271.2	+	processed_pseudogene	KNOWN	RP11-1059L18.1	1	1	-0.263837
chr8	117128455	117130299	117129377	ENSG00000253622.1	+	sense_intronic	KNOWN	RP11-654G14.1	1	2	-0.582562
chr8	117163968	117164255	117164111	ENSG00000240151.3	+	misc_RNA	KNOWN	RN7SL826P	1	1	-0.908008
chr8	117164179	117164255	117164217	ENSG00000281002.1	+	miRNA	NOVEL	AC084114.1	1	1	-0.908008
chr8	117313528	117313661	117313594	ENSG00000252852.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.778497
chr8	117520713	117540262	117530487	ENSG00000164758.7	+	protein_coding	KNOWN	MED30	4	4	-0.598783
chr8	117523271	117524061	117523666	ENSG00000239917.3	-	unprocessed_pseudogene	KNOWN	RPS10P16	1	2	-0.608448
chr8	117794490	118111853	117953171	ENSG00000182197.10	-	protein_coding	KNOWN	EXT1	3	11	-0.076439
chr8	118189455	118189970	118189712	ENSG00000279535.1	-	TEC	KNOWN	AC113188.2	1	1	-0.409829
chr8	118189459	118621995	118405727	ENSG00000177570.13	-	protein_coding	KNOWN	SAMD12	8	5	-0.228023
chr8	118282139	118400605	118341372	ENSG00000225885.6	+	antisense	KNOWN	AC023590.1	5	5	-0.248993
chr8	118621001	118858218	118739609	ENSG00000281641.2	+	lincRNA	KNOWN	SAMD12-AS1	2	6	-0.313733
chr8	118761856	118762201	118762028	ENSG00000242206.2	-	processed_pseudogene	KNOWN	RPS26P35	1	1	-0.305528
chr8	118923557	118952200	118937878	ENSG00000164761.8	-	protein_coding	KNOWN	TNFRSF11B	3	5	-0.171802
chr8	118976513	118976619	118976566	ENSG00000207334.1	+	snRNA	KNOWN	RNU6-12P	1	1	-0.242798
chr8	118982579	118982875	118982727	ENSG00000254247.1	-	processed_pseudogene	KNOWN	RP11-278I4.1	1	1	-0.242798
chr8	118995452	119106582	119051017	ENSG00000184374.2	+	protein_coding	KNOWN	COLEC10	2	7	-0.458206
chr8	119062942	119068782	119065862	ENSG00000254278.1	-	antisense	KNOWN	RP11-278I4.2	1	2	-0.595069
chr8	119165034	119245673	119205353	ENSG00000147676.13	+	protein_coding	KNOWN	MAL2	4	5	-0.434272
chr8	119215111	119246848	119230979	ENSG00000253972.5	-	lincRNA	KNOWN	RP11-4K16.2	5	6	-0.332612
chr8	119325171	119325265	119325218	ENSG00000276479.1	+	miRNA	KNOWN	MIR548AZ	1	1	-0.330032
chr8	119388348	119388469	119388408	ENSG00000206776.1	+	snoRNA	NOVEL	SNORA32	1	1	-0.429545
chr8	119416306	119424353	119420329	ENSG00000136999.4	+	protein_coding	KNOWN	NOV	2	5	-0.167528
chr8	119419910	119462350	119441130	ENSG00000253398.1	-	antisense	KNOWN	RP11-775B15.2	1	4	-0.325885
chr8	119480279	119480775	119480527	ENSG00000254037.2	-	processed_pseudogene	KNOWN	RP11-775B15.3	1	1	-0.007544
chr8	119557086	119673453	119615269	ENSG00000136960.12	-	protein_coding	KNOWN	ENPP2	9	26	-0.330832
chr8	119618162	119618474	119618318	ENSG00000253495.1	-	processed_pseudogene	KNOWN	CYCSP23	1	1	-0.268303
chr8	119711830	119712145	119711987	ENSG00000201896.1	-	misc_RNA	KNOWN	RN7SKP153	1	1	-0.560085
chr8	119730775	119832863	119781819	ENSG00000064313.11	-	protein_coding	KNOWN	TAF2	9	26	-0.471610
chr8	119833976	119856010	119844993	ENSG00000136982.5	-	protein_coding	KNOWN	DSCC1	2	9	-0.303743
chr8	119838736	119840385	119839560	ENSG00000279347.1	-	TEC	KNOWN	RP11-85I17.2	1	1	-0.462382
chr8	119862662	119862956	119862809	ENSG00000244642.3	+	misc_RNA	KNOWN	RN7SL396P	1	1	0.119128
chr8	119867419	119874488	119870953	ENSG00000245330.4	-	lincRNA	KNOWN	KB-1471A8.1	2	3	-0.087621
chr8	119873717	120050913	119962315	ENSG00000155792.9	+	protein_coding	KNOWN	DEPTOR	3	9	-0.140851
chr8	119891132	119891229	119891180	ENSG00000202356.1	-	rRNA	KNOWN	RNA5SP277	1	1	-0.371182
chr8	120052180	120056201	120054190	ENSG00000254343.2	+	lincRNA	KNOWN	RP11-760H22.2	2	2	-0.147474
chr8	120059780	120372036	120215908	ENSG00000187955.11	+	protein_coding	KNOWN	COL14A1	9	48	-0.458771
chr8	120380761	120445402	120413081	ENSG00000172172.7	-	protein_coding	KNOWN	MRPL13	7	7	-0.468831
chr8	120445400	120542133	120493766	ENSG00000172167.7	+	protein_coding	KNOWN	MTBP	8	22	-0.413718
chr8	120535745	120813273	120674509	ENSG00000172164.13	-	protein_coding	KNOWN	SNTB1	5	8	-0.201381
chr8	120635558	120638204	120636881	ENSG00000250290.1	-	processed_pseudogene	KNOWN	NCAPGP1	1	2	-0.397974
chr8	120761253	120776832	120769042	ENSG00000248318.1	+	antisense	KNOWN	RP11-713M15.1	1	5	0.080512
chr8	120812219	120813359	120812789	ENSG00000272502.1	+	antisense	KNOWN	RP11-713M15.2	1	1	0.126549
chr8	120913065	121119754	121016409	ENSG00000253619.1	+	lincRNA	KNOWN	RP11-369K17.1	1	4	-0.291138
chr8	121113358	121113919	121113638	ENSG00000271219.1	-	processed_pseudogene	KNOWN	RP11-369K17.2	1	1	-0.317263
chr8	121186758	121186892	121186825	ENSG00000221644.1	-	miRNA	NOVEL	AC027238.1	1	1	-0.172711
chr8	121380137	121380465	121380301	ENSG00000239872.1	-	processed_pseudogene	KNOWN	RPL35AP19	1	1	-0.101950
chr8	121542897	121542995	121542946	ENSG00000263525.1	-	miRNA	NOVEL	AC022909.1	1	1	-0.075608
chr8	121612116	121641390	121626753	ENSG00000170961.6	-	protein_coding	KNOWN	HAS2	1	4	-0.620496
chr8	121639293	121644693	121641993	ENSG00000248690.6	+	antisense	KNOWN	HAS2-AS1	4	4	-0.424925
chr8	121671773	121684562	121678167	ENSG00000254209.1	-	lincRNA	KNOWN	RP11-3G20.1	1	3	-0.310379
chr8	121679126	121707631	121693378	ENSG00000248478.2	+	lincRNA	KNOWN	RP11-3G20.2	1	3	-0.321489
chr8	121884724	121904273	121894498	ENSG00000254018.1	+	lincRNA	KNOWN	RP11-785H20.1	1	4	-0.449834
chr8	121954640	122127184	122040912	ENSG00000254303.1	-	lincRNA	KNOWN	RP11-398G24.2	1	3	-0.417019
chr8	122091480	122091609	122091544	ENSG00000253814.1	+	processed_pseudogene	KNOWN	MRPS36P3	1	1	-0.115813
chr8	122414332	122428551	122421441	ENSG00000255364.1	-	lincRNA	KNOWN	RP11-94A24.1	1	3	-0.607349
chr8	122485515	122489815	122487665	ENSG00000255325.2	-	lincRNA	KNOWN	RP11-96B2.1	1	4	-0.371409
chr8	122670385	122694106	122682245	ENSG00000253819.1	-	lincRNA	KNOWN	LINC01151	1	4	-0.172282
chr8	122671291	122671394	122671342	ENSG00000238901.1	+	snoRNA	NOVEL	snoU13	1	1	-0.255322
chr8	122700269	122703423	122701846	ENSG00000263443.1	-	lincRNA	KNOWN	RP11-973F15.2	1	2	0.224299
chr8	122769274	122770150	122769712	ENSG00000235165.2	+	processed_pseudogene	KNOWN	CDK5PS	1	1	0.150280
chr8	122779971	122780830	122780400	ENSG00000272384.1	-	lincRNA	KNOWN	RP11-44N11.2	1	1	-0.085926
chr8	122780760	122781071	122780915	ENSG00000272043.1	+	lincRNA	KNOWN	RP11-44N11.3	1	1	-0.085926
chr8	122781394	122974512	122877953	ENSG00000178764.7	+	protein_coding	KNOWN	ZHX2	2	4	0.110244
chr8	122807746	122816517	122812131	ENSG00000253372.5	+	sense_intronic	KNOWN	RP11-44N11.1	2	5	0.044518
chr8	122846691	122846779	122846735	ENSG00000221542.1	-	miRNA	NOVEL	AC016405.1	1	1	0.272564
chr8	122977026	122985629	122981327	ENSG00000259631.1	-	lincRNA	KNOWN	RP11-557C18.4	1	2	0.091992
chr8	123002560	123030751	123016655	ENSG00000253607.1	+	antisense	KNOWN	RP11-557C18.3	1	2	0.048823
chr8	123013164	123042423	123027793	ENSG00000136986.9	-	protein_coding	KNOWN	DERL1	6	8	0.111079
chr8	123041968	123152153	123097060	ENSG00000156787.16	+	protein_coding	KNOWN	TBC1D31	15	22	-0.097620
chr8	123044717	123044812	123044764	ENSG00000280598.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.125544
chr8	123123106	123123682	123123394	ENSG00000253463.1	+	processed_pseudogene	KNOWN	HMGB1P19	1	1	-0.082506
chr8	123178960	123210079	123194519	ENSG00000147689.16	+	protein_coding	KNOWN	FAM83A	8	6	0.221235
chr8	123180310	123180525	123180417	ENSG00000221461.2	-	snoRNA	NOVEL	U3	1	1	0.231491
chr8	123181638	123182788	123182213	ENSG00000253258.1	-	antisense	KNOWN	RP11-539E17.5	1	2	0.231491
chr8	123192875	123192932	123192903	ENSG00000253410.1	+	transcribed_processed_pseudogene	KNOWN	RP11-539E17.3	1	1	0.215003
chr8	123201172	123202743	123201957	ENSG00000204949.8	-	antisense	KNOWN	FAM83A-AS1	3	3	0.215003
chr8	123215788	123215863	123215825	ENSG00000266324.1	-	miRNA	KNOWN	MIR4663	1	1	0.364071
chr8	123219957	123241398	123230677	ENSG00000189376.11	-	protein_coding	KNOWN	C8orf76	7	6	0.231437
chr8	123226189	123274284	123250236	ENSG00000259305.6	-	protein_coding	KNOWN	ZHX1-C8orf76	2	5	0.080225
chr8	123236852	123237062	123236957	ENSG00000243498.2	+	processed_pseudogene	KNOWN	UBA52P5	1	1	0.114593
chr8	123248451	123275541	123261996	ENSG00000165156.14	-	protein_coding	KNOWN	ZHX1	8	4	0.020455
chr8	123262843	123262949	123262896	ENSG00000222607.1	+	snRNA	KNOWN	RNU6-628P	1	1	-0.024653
chr8	123288355	123290503	123289429	ENSG00000253336.1	+	processed_pseudogene	KNOWN	RP11-468O2.1	1	1	0.087429
chr8	123319850	123416350	123368100	ENSG00000156802.12	-	protein_coding	KNOWN	ATAD2	8	29	-0.132639
chr8	123342414	123342519	123342466	ENSG00000252297.1	+	snRNA	KNOWN	RNU6-875P	1	1	-0.052398
chr8	123348034	123348130	123348082	ENSG00000207704.2	+	miRNA	KNOWN	MIR548AA1	1	1	-0.052398
chr8	123352181	123352643	123352412	ENSG00000254388.1	+	processed_pseudogene	KNOWN	DUTP2	1	1	-0.354755
chr8	123400582	123402095	123401338	ENSG00000254294.1	+	processed_pseudogene	KNOWN	IMPDH1P6	1	1	-0.285765
chr8	123416725	123467230	123441977	ENSG00000156795.6	+	protein_coding	KNOWN	WDYHV1	9	8	0.230287
chr8	123454981	123455107	123455044	ENSG00000278374.1	-	snRNA	NOVEL	U4	1	1	0.257801
chr8	123497889	123541206	123519547	ENSG00000156804.7	-	protein_coding	KNOWN	FBXO32	6	9	0.094059
chr8	123563070	123568762	123565916	ENSG00000254113.1	-	lincRNA	KNOWN	RP11-174I12.2	1	2	0.061777
chr8	123588759	123589046	123588902	ENSG00000251840.1	+	misc_RNA	KNOWN	RN7SKP155	1	1	0.100120
chr8	123614225	123658570	123636397	ENSG00000253286.5	+	antisense	KNOWN	CTD-2552K11.2	2	5	0.156038
chr8	123645527	123652950	123649238	ENSG00000175946.8	-	protein_coding	KNOWN	KLHL38	1	3	0.277059
chr8	123680794	123737407	123709100	ENSG00000104537.16	-	protein_coding	KNOWN	ANXA13	6	12	0.150341
chr8	123768456	123815452	123791954	ENSG00000176853.15	+	protein_coding	KNOWN	FAM91A1	8	24	-0.263144
chr8	123851987	124120061	123986024	ENSG00000214814.6	+	protein_coding	KNOWN	FER1L6	2	41	-0.161665
chr8	123924759	123925933	123925346	ENSG00000254000.1	-	lincRNA	KNOWN	RP11-245A18.1	1	2	-0.167976
chr8	123984138	124040782	124012460	ENSG00000181171.5	-	antisense	KNOWN	FER1L6-AS1	1	6	-0.160597
chr8	124036010	124040468	124038239	ENSG00000254249.1	-	antisense	KNOWN	RP11-959I15.4	1	2	-0.118687
chr8	124046073	124171522	124108797	ENSG00000253868.3	-	antisense	KNOWN	FER1L6-AS2	1	5	-0.246988
chr8	124141888	124143512	124142700	ENSG00000250727.1	+	processed_pseudogene	KNOWN	RP11-959I15.1	1	2	-0.268410
chr8	124151923	124152433	124152178	ENSG00000253885.1	+	processed_pseudogene	KNOWN	ARF1P3	1	1	-0.267089
chr8	124192671	124247398	124220034	ENSG00000214803.3	-	lincRNA	KNOWN	RP11-37N22.1	1	3	0.053992
chr8	124260646	124260752	124260699	ENSG00000206724.1	+	snRNA	KNOWN	RNU6-756P	1	1	-0.099628
chr8	124271683	124277584	124274633	ENSG00000253227.1	+	lincRNA	KNOWN	RP11-383J24.1	1	3	0.500688
chr8	124301315	124301804	124301559	ENSG00000237586.3	+	processed_pseudogene	KNOWN	RP11-383J24.2	1	1	-0.108473
chr8	124306189	124372692	124339440	ENSG00000164983.7	-	protein_coding	KNOWN	TMEM65	1	7	-0.477692
chr8	124450820	124462150	124456485	ENSG00000183665.5	+	protein_coding	KNOWN	TRMT12	3	3	0.136114
chr8	124462485	124474576	124468530	ENSG00000245149.3	-	lincRNA	KNOWN	RNF139-AS1	3	3	0.088894
chr8	124474738	124487914	124481326	ENSG00000170881.4	+	protein_coding	KNOWN	RNF139	2	2	0.011373
chr8	124488485	124539458	124513971	ENSG00000147687.16	-	protein_coding	KNOWN	TATDN1	21	13	-0.082140
chr8	124488510	124491643	124490076	ENSG00000253106.1	+	antisense	KNOWN	RP11-158K1.3	1	2	-0.095030
chr8	124539103	124568510	124553806	ENSG00000147684.7	+	protein_coding	KNOWN	NDUFB9	7	4	0.127786
chr8	124550790	124728429	124639609	ENSG00000170873.18	-	protein_coding	KNOWN	MTSS1	18	15	0.139688
chr8	124579631	124580648	124580139	ENSG00000272486.1	+	antisense	KNOWN	RP11-532M24.1	1	1	0.135493
chr8	124811618	124815682	124813650	ENSG00000255491.1	-	lincRNA	KNOWN	RP11-1082L8.4	1	3	0.352144
chr8	124821978	124822058	124822018	ENSG00000263735.1	-	miRNA	KNOWN	MIR4662A	1	1	0.352144
chr8	124834884	124857516	124846200	ENSG00000255080.1	-	lincRNA	KNOWN	RP11-1082L8.3	1	3	0.111622
chr8	124838058	124838331	124838194	ENSG00000281439.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.019235
chr8	124848737	124954328	124901532	ENSG00000249816.6	+	lincRNA	KNOWN	LINC00964	9	6	0.095507
chr8	124920428	124922076	124921252	ENSG00000250428.1	+	processed_pseudogene	KNOWN	RP11-1082L8.1	1	2	-0.014923
chr8	124936524	124943765	124940144	ENSG00000255313.1	-	lincRNA	KNOWN	RP11-1082L8.2	1	3	0.048708
chr8	124973298	124979389	124976343	ENSG00000180938.5	+	protein_coding	KNOWN	ZNF572	1	3	-0.203136
chr8	124996985	124998198	124997591	ENSG00000253513.1	-	antisense	KNOWN	RP11-6D1.3	1	2	-0.190595
chr8	124998497	125022283	125010390	ENSG00000104549.11	+	protein_coding	KNOWN	SQLE	6	11	-0.034588
chr8	125024260	125091840	125058050	ENSG00000164961.15	-	protein_coding	KNOWN	KIAA0196	8	29	-0.060182
chr8	125040684	125044989	125042836	ENSG00000253167.1	+	antisense	KNOWN	KIAA0196-AS1	1	2	-0.206349
chr8	125091679	125367120	125229399	ENSG00000156831.7	+	protein_coding	KNOWN	NSMCE2	13	8	-0.107939
chr8	125270604	125270902	125270753	ENSG00000242170.3	+	misc_RNA	KNOWN	RN7SL329P	1	1	-0.046392
chr8	125348196	125351416	125349806	ENSG00000254431.1	-	antisense	KNOWN	RP11-550A5.2	1	2	-0.010351
chr8	125430321	125438405	125434363	ENSG00000173334.3	+	protein_coding	KNOWN	TRIB1	4	3	0.357582
chr8	125466939	125541373	125504156	ENSG00000253111.1	+	lincRNA	KNOWN	RP11-136O12.2	2	4	0.133832
chr8	125524878	125524964	125524921	ENSG00000277329.1	+	miRNA	NOVEL	AC091114.1	1	1	0.275546
chr8	125749055	125750241	125749648	ENSG00000253470.1	-	lincRNA	KNOWN	RP11-697B24.1	1	2	-0.417053
chr8	125900951	125901054	125901002	ENSG00000206695.1	+	snRNA	KNOWN	RNU6-442P	1	1	-0.801093
chr8	125922308	125951249	125936778	ENSG00000245164.6	-	lincRNA	KNOWN	LINC00861	4	4	-0.517244
chr8	125951861	125952314	125952087	ENSG00000253651.1	-	processed_pseudogene	KNOWN	SOD1P3	1	1	-0.488709
chr8	125998994	126001001	125999997	ENSG00000254227.1	-	lincRNA	KNOWN	RP11-622O11.4	1	2	-0.323046
chr8	126072587	126074231	126073409	ENSG00000250563.1	+	processed_pseudogene	KNOWN	KNOP1P5	1	2	-0.621127
chr8	126073046	126073532	126073289	ENSG00000253841.1	-	processed_pseudogene	KNOWN	RP11-622O11.5	1	1	-0.621127
chr8	126141676	126141759	126141717	ENSG00000221706.1	-	miRNA	NOVEL	AC090573.1	1	1	-0.570973
chr8	126174186	126175014	126174600	ENSG00000248720.1	-	processed_pseudogene	KNOWN	RFPL4AP5	1	2	-0.647481
chr8	126325495	126329535	126327515	ENSG00000244791.2	+	lincRNA	KNOWN	RP11-65D17.1	1	3	-0.617822
chr8	126474189	126492596	126483392	ENSG00000253427.1	+	lincRNA	KNOWN	RP11-103H7.1	1	3	-0.386913
chr8	126498149	126500303	126499226	ENSG00000253220.1	+	lincRNA	KNOWN	RP11-103H7.2	1	2	-0.163265
chr8	126504763	126504869	126504816	ENSG00000207138.1	+	snRNA	KNOWN	RNU6-869P	1	1	-0.163265
chr8	126518698	126522351	126520524	ENSG00000253530.1	+	lincRNA	KNOWN	RP11-103H7.3	1	3	-0.363688
chr8	126552442	126558393	126555417	ENSG00000168672.3	-	protein_coding	KNOWN	FAM84B	2	2	-0.131904
chr8	126556896	126557433	126557164	ENSG00000254010.1	+	antisense	KNOWN	RP11-103H7.5	1	2	-0.131904
chr8	126557875	126713415	126635645	ENSG00000254286.5	+	antisense	KNOWN	RP11-89K10.1	4	5	-0.415279
chr8	126582631	126583006	126582818	ENSG00000253543.1	-	processed_pseudogene	KNOWN	RP11-89K10.2	1	1	-0.131841
chr8	126671522	126671654	126671588	ENSG00000212451.1	+	snRNA	KNOWN	RNU11-4P	1	1	-0.266056
chr8	126766876	126790637	126778756	ENSG00000253573.1	-	lincRNA	KNOWN	RP11-351C8.1	1	4	-0.488599
chr8	126847055	127021014	126934034	ENSG00000253438.2	+	lincRNA	KNOWN	PCAT1	2	5	-0.367758
chr8	127072694	127082221	127077457	ENSG00000253264.1	-	lincRNA	KNOWN	PCAT2	1	4	-0.462320
chr8	127079874	127092600	127086237	ENSG00000282961.1	+	lincRNA	KNOWN	PRNCR1	1	1	-0.456141
chr8	127086263	127087510	127086886	ENSG00000224722.3	-	processed_pseudogene	KNOWN	RP11-255B23.1	1	1	-0.462320
chr8	127185635	127203222	127194428	ENSG00000254166.1	-	lincRNA	KNOWN	CASC19	1	4	-0.418550
chr8	127207866	127219088	127213477	ENSG00000247844.1	-	lincRNA	KNOWN	CCAT1	1	2	-0.353264
chr8	127289817	127482139	127385978	ENSG00000246228.6	-	antisense	KNOWN	CASC8	4	6	-0.279404
chr8	127292233	127292440	127292336	ENSG00000271509.1	+	processed_pseudogene	KNOWN	RP11-382A18.3	1	1	-0.463527
chr8	127339274	127392631	127365952	ENSG00000253929.1	+	lincRNA	KNOWN	CASC21	1	2	-0.254891
chr8	127400399	127402150	127401274	ENSG00000280997.1	+	lincRNA	KNOWN	CCAT2	1	1	-0.613103
chr8	127414290	127420069	127417179	ENSG00000212993.4	+	protein_coding	KNOWN	POU5F1B	1	2	-0.371409
chr8	127630283	127630657	127630470	ENSG00000279524.1	-	protein_coding	KNOWN	AC108925.1	1	1	-0.268410
chr8	127686343	127733967	127710155	ENSG00000249375.7	-	lincRNA	KNOWN	CASC11	3	4	-0.269239
chr8	127735434	127741434	127738434	ENSG00000136997.15	+	protein_coding	KNOWN	MYC	7	3	0.450039
chr8	127794533	128101253	127947893	ENSG00000249859.7	+	lincRNA	KNOWN	PVT1	25	8	0.220162
chr8	127794541	127794734	127794637	ENSG00000276443.1	+	misc_RNA	NOVEL	PVT1_1	1	1	-0.051974
chr8	127795962	127796028	127795995	ENSG00000275264.1	+	miRNA	KNOWN	MIR1204	1	1	-0.051974
chr8	127890626	127890720	127890673	ENSG00000278324.1	+	misc_RNA	NOVEL	PVT1_3	1	1	0.185101
chr8	127946559	127948723	127947641	ENSG00000280055.1	-	TEC	KNOWN	TMEM75	2	1	0.077195
chr8	127960633	127960695	127960664	ENSG00000221771.1	+	miRNA	KNOWN	MIR1205	1	1	0.200633
chr8	127999131	127999294	127999212	ENSG00000207110.1	+	snRNA	KNOWN	RNU1-106P	1	1	0.218749
chr8	128010188	128010428	128010308	ENSG00000278275.1	-	processed_pseudogene	KNOWN	RP11-55J15.2	1	1	0.046668
chr8	128010382	128010611	128010496	ENSG00000222501.1	-	snRNA	KNOWN	RNU4-25P	1	1	0.046668
chr8	128049152	128049238	128049195	ENSG00000221176.1	+	miRNA	KNOWN	MIR1207	1	1	0.379973
chr8	128118011	128118385	128118198	ENSG00000280151.1	+	protein_coding	KNOWN	AC026248.1	1	1	0.231717
chr8	128150116	128150188	128150152	ENSG00000221261.1	+	miRNA	KNOWN	MIR1208	1	1	0.203023
chr8	128220504	128220803	128220653	ENSG00000201782.1	+	misc_RNA	KNOWN	RN7SKP226	1	1	-0.162109
chr8	128405269	128564679	128484974	ENSG00000254275.6	-	processed_transcript	KNOWN	LINC00824	6	6	-0.265263
chr8	128819794	128819878	128819836	ENSG00000221351.1	+	miRNA	NOVEL	AC068570.1	1	1	-0.004516
chr8	128904773	128966001	128935387	ENSG00000281657.2	-	lincRNA	KNOWN	LINC00976	3	7	-0.357741
chr8	129216467	129241250	129228858	ENSG00000250400.3	-	lincRNA	KNOWN	LINC00977	1	3	-0.576162
chr8	129250967	129251138	129251052	ENSG00000253225.1	+	processed_pseudogene	KNOWN	RP11-1057N3.2	1	1	-0.653194
chr8	129290983	129291275	129291129	ENSG00000222755.1	+	misc_RNA	KNOWN	RN7SKP206	1	1	-0.560085
chr8	129351691	129680239	129515965	ENSG00000229140.8	-	lincRNA	KNOWN	CCDC26	3	4	-0.398673
chr8	129415949	129445852	129430900	ENSG00000253926.1	+	lincRNA	KNOWN	RP11-26E5.1	1	3	-0.305908
chr8	129484057	129484142	129484099	ENSG00000263763.1	-	miRNA	KNOWN	MIR3686	1	1	-0.211558
chr8	129679135	129683679	129681407	ENSG00000254223.1	-	lincRNA	KNOWN	RP11-419K12.1	1	4	-0.275465
chr8	129728744	129730445	129729594	ENSG00000224110.3	+	processed_pseudogene	KNOWN	MTRF1LP2	1	3	-0.157948
chr8	129748196	129786888	129767542	ENSG00000147697.8	-	protein_coding	KNOWN	GSDMC	4	14	-0.445641
chr8	129832301	129844504	129838402	ENSG00000254317.1	+	antisense	KNOWN	RP11-473O4.5	1	3	-0.149629
chr8	129839593	130017129	129928361	ENSG00000153310.18	-	protein_coding	KNOWN	FAM49B	29	15	-0.055262
chr8	129864478	129865052	129864765	ENSG00000243402.1	+	processed_pseudogene	KNOWN	RP11-473O4.1	1	1	0.109803
chr8	129868590	129868716	129868653	ENSG00000200075.1	-	snoRNA	NOVEL	SNORA25	1	1	0.109803
chr8	129890465	129901758	129896111	ENSG00000254263.1	+	lincRNA	KNOWN	RP11-473O4.4	1	2	0.154923
chr8	129939856	129949394	129944625	ENSG00000253720.1	+	lincRNA	KNOWN	RP11-473O4.3	1	4	-0.524680
chr8	130004528	130004601	130004564	ENSG00000253043.1	-	snRNA	KNOWN	RNU7-181P	1	1	0.412289
chr8	130008334	130008453	130008393	ENSG00000264653.1	-	miRNA	KNOWN	MIR5194	1	1	0.412289
chr8	130052104	130443660	130247882	ENSG00000153317.14	-	protein_coding	KNOWN	ASAP1	16	31	0.124193
chr8	130069541	130069652	130069596	ENSG00000200304.1	-	snRNA	KNOWN	RNU6-1255P	1	1	0.281710
chr8	130082738	130084768	130083753	ENSG00000280543.1	-	sense_intronic	KNOWN	ASAP1-IT2	1	1	0.146440
chr8	130162972	130163127	130163049	ENSG00000212342.1	+	snoRNA	NOVEL	SNORA12	1	1	0.022867
chr8	130595299	130655712	130625505	ENSG00000253656.1	-	lincRNA	KNOWN	KB-1568E2.1	1	3	-0.139751
chr8	130780301	131042426	130911363	ENSG00000155897.9	-	protein_coding	KNOWN	ADCY8	3	18	-0.349540
chr8	130892070	130892785	130892427	ENSG00000253259.1	-	sense_intronic	KNOWN	RP11-737F9.2	1	2	-0.568738
chr8	130935409	130949665	130942537	ENSG00000253992.1	+	antisense	KNOWN	RP11-737F9.1	1	3	-0.353246
chr8	131130388	131144881	131137634	ENSG00000253407.1	-	lincRNA	KNOWN	RP11-381I15.1	1	3	-0.573024
chr8	131308545	131317632	131313088	ENSG00000253507.5	+	lincRNA	KNOWN	CTD-2501M5.1	3	5	-0.555828
chr8	131432776	131432869	131432822	ENSG00000252158.1	-	snoRNA	NOVEL	SNORA72	1	1	-0.551864
chr8	131712512	131712980	131712746	ENSG00000254255.1	+	processed_pseudogene	KNOWN	CTD-2008O4.1	1	1	-0.369588
chr8	131904088	132013642	131958865	ENSG00000132294.13	+	protein_coding	KNOWN	EFR3A	7	23	-0.357483
chr8	132024220	132059380	132041800	ENSG00000253117.4	-	protein_coding	KNOWN	OC90	1	14	-0.154726
chr8	132024238	132085655	132054946	ENSG00000258417.3	-	protein_coding	KNOWN	RP11-240B13.2	1	18	-0.214047
chr8	132061486	132111159	132086322	ENSG00000132297.11	-	protein_coding	KNOWN	HHLA1	3	17	-0.210821
chr8	132120859	132480953	132300906	ENSG00000184156.15	-	protein_coding	KNOWN	KCNQ3	5	16	-0.250351
chr8	132560498	132561479	132560988	ENSG00000253521.1	-	lincRNA	KNOWN	HPYR1	1	1	-0.251416
chr8	132571953	132675617	132623785	ENSG00000129295.8	-	protein_coding	KNOWN	LRRC6	13	13	-0.314979
chr8	132680900	132681002	132680951	ENSG00000222570.1	-	miRNA	NOVEL	AF216667.1	1	1	-0.091720
chr8	132685007	132760712	132722859	ENSG00000165071.14	-	protein_coding	KNOWN	TMEM71	11	10	-0.196647
chr8	132775358	132848807	132812082	ENSG00000129292.20	+	protein_coding	KNOWN	PHF20L1	20	21	-0.496855
chr8	132826179	132826903	132826541	ENSG00000270137.1	+	sense_intronic	KNOWN	CTC-137K3.1	1	1	-0.815979
chr8	132838117	132844298	132841207	ENSG00000223697.3	-	antisense	KNOWN	AF230666.2	2	3	-0.363460
chr8	132866958	133134903	133000930	ENSG00000042832.11	+	protein_coding	KNOWN	TG	20	48	0.189670
chr8	133002605	133003075	133002840	ENSG00000240237.1	-	processed_pseudogene	KNOWN	CTD-2182N23.1	1	1	0.061131
chr8	133036724	133103054	133069889	ENSG00000155926.13	-	protein_coding	KNOWN	SLA	23	9	0.321877
chr8	133046481	133046581	133046531	ENSG00000276961.1	-	miRNA	KNOWN	MIR7848	1	1	0.338430
chr8	133191039	133230344	133210691	ENSG00000104415.13	+	protein_coding	KNOWN	WISP1	5	5	0.316407
chr8	133229056	133229697	133229376	ENSG00000270132.1	+	sense_intronic	KNOWN	WISP1-OT1	1	1	0.389152
chr8	133237171	133302022	133269596	ENSG00000104419.14	-	protein_coding	KNOWN	NDRG1	29	16	0.392936
chr8	133325997	133326404	133326200	ENSG00000243537.1	+	processed_pseudogene	KNOWN	CTC-458A3.1	1	1	0.162765
chr8	133392211	133392690	133392450	ENSG00000253638.1	-	processed_pseudogene	KNOWN	CTC-369M3.1	1	1	-0.016068
chr8	133408006	133409107	133408556	ENSG00000225259.4	+	processed_pseudogene	KNOWN	ST13P6	1	1	-0.016068
chr8	133454848	133571940	133513394	ENSG00000008513.14	-	protein_coding	KNOWN	ST3GAL1	15	10	0.278807
chr8	133573183	133573861	133573522	ENSG00000261220.2	+	lincRNA	KNOWN	RP11-629O1.2	1	1	0.296923
chr8	133644598	133644725	133644661	ENSG00000212273.1	-	snoRNA	NOVEL	SNORA40	1	1	0.279195
chr8	133668420	133668701	133668560	ENSG00000276193.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.151801
chr8	133754811	133755450	133755130	ENSG00000253970.1	+	processed_pseudogene	KNOWN	MTND2P7	1	1	0.153721
chr8	133755845	133756646	133756245	ENSG00000253916.1	+	processed_pseudogene	KNOWN	CTD-2309H9.2	1	1	0.153721
chr8	133771409	133814537	133792973	ENSG00000253561.1	+	lincRNA	KNOWN	CTD-2588J1.1	1	3	-0.254816
chr8	133775551	133777352	133776451	ENSG00000253165.1	-	lincRNA	KNOWN	CTD-2309H9.3	1	3	-0.177195
chr8	133786093	133786268	133786180	ENSG00000254313.1	-	processed_pseudogene	KNOWN	CTD-2309H9.4	1	1	-0.177195
chr8	133886496	133902407	133894451	ENSG00000253593.2	+	lincRNA	KNOWN	RP11-157E21.1	1	4	-0.082908
chr8	133946677	133947335	133947006	ENSG00000277576.1	+	unprocessed_pseudogene	KNOWN	RP11-157E21.3	1	1	-0.350319
chr8	133962992	133963259	133963125	ENSG00000271240.1	-	processed_pseudogene	KNOWN	RP11-157E21.2	1	1	-0.711743
chr8	134211865	134320447	134266156	ENSG00000253627.1	-	lincRNA	KNOWN	RP11-513H8.1	1	2	-0.310923
chr8	134477788	134713049	134595418	ENSG00000066827.15	-	protein_coding	KNOWN	ZFAT	17	17	-0.019193
chr8	134598071	134598149	134598110	ENSG00000276140.1	+	misc_RNA	NOVEL	ZFAT-AS1_1	1	1	-0.141599
chr8	134598071	134600689	134599380	ENSG00000248492.1	+	antisense	KNOWN	ZFAT-AS1	1	2	-0.141599
chr8	134598318	134598518	134598418	ENSG00000277732.1	+	misc_RNA	NOVEL	ZFAT-AS1_2	1	1	-0.141599
chr8	134600257	134600336	134600296	ENSG00000278454.1	+	misc_RNA	NOVEL	ZFAT-AS1_3	1	1	-0.141599
chr8	134673131	134673512	134673321	ENSG00000271048.1	+	processed_pseudogene	KNOWN	CTD-2342N23.2	1	1	-0.000619
chr8	134722947	134723949	134723448	ENSG00000272456.1	+	lincRNA	KNOWN	CTD-2342N23.3	1	1	0.144459
chr8	134764809	134767276	134766042	ENSG00000278898.1	+	TEC	KNOWN	CTD-2342N23.1	1	1	-0.075850
chr8	134783694	134785879	134784786	ENSG00000279518.1	-	TEC	KNOWN	AC083843.4	1	1	-0.083095
chr8	134792020	134798272	134795146	ENSG00000259820.1	-	lincRNA	KNOWN	AC083843.1	1	1	-0.469887
chr8	134800520	134800607	134800563	ENSG00000207582.1	-	miRNA	KNOWN	MIR30B	1	1	-0.469887
chr8	134804876	134804945	134804910	ENSG00000199153.1	-	miRNA	KNOWN	MIR30D	1	1	-0.469887
chr8	134832747	134834482	134833614	ENSG00000254028.1	+	lincRNA	KNOWN	AC083843.2	1	2	-0.369339
chr8	134838069	134842637	134840353	ENSG00000253433.1	+	lincRNA	KNOWN	NCRNA00250	1	3	-0.369339
chr8	134849935	134881899	134865917	ENSG00000251218.1	+	lincRNA	KNOWN	RP11-1057B8.2	1	3	-0.161189
chr8	134978827	134979279	134979053	ENSG00000244413.1	-	processed_pseudogene	KNOWN	RPL23AP56	1	1	-0.158415
chr8	135234131	135299719	135266925	ENSG00000254083.5	+	lincRNA	KNOWN	LINC01591	3	6	-0.145923
chr8	135239790	135239859	135239824	ENSG00000265266.1	+	miRNA	NOVEL	AC022681.1	1	1	0.015371
chr8	135455865	135456952	135456408	ENSG00000254372.1	-	antisense	KNOWN	RP11-343P9.1	1	3	-0.098530
chr8	135457457	135656722	135557089	ENSG00000131773.13	+	protein_coding	KNOWN	KHDRBS3	12	9	-0.256056
chr8	135625185	135625981	135625583	ENSG00000253915.1	-	processed_pseudogene	KNOWN	MAPRE1P1	1	1	-0.423708
chr8	135742343	135742495	135742419	ENSG00000199652.2	-	snRNA	KNOWN	RNU1-35P	1	1	-0.063926
chr8	136047021	136166122	136106571	ENSG00000253248.5	+	lincRNA	KNOWN	RP11-149P24.1	2	5	-0.353495
chr8	136489448	136529876	136509662	ENSG00000253839.1	+	lincRNA	KNOWN	RP11-431D12.1	1	4	-0.518368
chr8	136530798	136984935	136757866	ENSG00000254101.5	+	lincRNA	KNOWN	RP11-30J20.1	7	6	-0.571023
chr8	137105352	137105458	137105405	ENSG00000206678.1	+	snRNA	KNOWN	RNU6-144P	1	1	-0.535199
chr8	137424904	137425021	137424962	ENSG00000274572.1	-	unprocessed_pseudogene	KNOWN	ZYXP1	1	1	-0.530641
chr8	137696724	137698467	137697595	ENSG00000254076.1	+	processed_pseudogene	KNOWN	CTD-3145H4.1	1	1	-0.611197
chr8	137809444	138083570	137946507	ENSG00000253288.1	-	lincRNA	KNOWN	RP11-238K6.1	1	3	-0.447433
chr8	137852327	137929044	137890685	ENSG00000254361.1	+	lincRNA	KNOWN	RP11-238K6.2	1	3	-0.426611
chr8	138063268	138073240	138068254	ENSG00000253988.1	+	lincRNA	KNOWN	RP11-489O18.1	1	2	-0.241460
chr8	138130023	138496822	138313422	ENSG00000147724.11	-	protein_coding	KNOWN	FAM135B	11	21	-0.362035
chr8	138588235	138914006	138751120	ENSG00000169436.16	-	protein_coding	KNOWN	COL22A1	7	65	-0.185150
chr8	138803386	138803446	138803416	ENSG00000276933.1	-	miRNA	KNOWN	MIR7641-1	1	1	-0.147584
chr8	139096305	139102830	139099567	ENSG00000253432.1	-	lincRNA	KNOWN	RP11-324F11.1	1	3	-0.252538
chr8	139108430	139108534	139108482	ENSG00000251744.1	+	snoRNA	NOVEL	SNORA25	1	1	-0.252538
chr8	139114193	139127953	139121073	ENSG00000253783.1	-	lincRNA	KNOWN	CTD-2534J5.1	1	3	-0.210332
chr8	139460062	139463016	139461539	ENSG00000254258.1	-	lincRNA	KNOWN	RP11-398H6.1	1	2	-0.337692
chr8	139508701	139508971	139508836	ENSG00000275078.1	-	unprocessed_pseudogene	KNOWN	RP11-656A10.1	1	1	-0.217177
chr8	139600838	139703056	139651947	ENSG00000169427.6	-	protein_coding	KNOWN	KCNK9	6	4	0.109724
chr8	139730343	140458579	140094461	ENSG00000167632.14	-	protein_coding	KNOWN	TRAPPC9	16	23	0.086093
chr8	139911238	139916620	139913929	ENSG00000253574.5	+	antisense	KNOWN	RP11-284H18.1	2	3	-0.014923
chr8	139931172	139933946	139932559	ENSG00000250733.5	+	TEC	KNOWN	C8orf17	2	1	0.451662
chr8	140039756	140041037	140040396	ENSG00000274064.1	+	processed_pseudogene	KNOWN	RP11-570L14.1	1	1	-0.213258
chr8	140094894	140099137	140097015	ENSG00000282164.1	-	sense_intronic	KNOWN	PEG13	1	1	0.115199
chr8	140505813	140508043	140506928	ENSG00000259891.1	-	antisense	KNOWN	CTA-204B4.2	1	1	0.461226
chr8	140511298	140517137	140514217	ENSG00000104472.9	+	protein_coding	KNOWN	CHRAC1	5	3	0.588297
chr8	140520156	140635619	140577887	ENSG00000123908.11	-	protein_coding	KNOWN	AGO2	10	19	0.525487
chr8	140572142	140572812	140572477	ENSG00000279766.1	-	TEC	KNOWN	RP11-642A1.2	1	1	0.720581
chr8	140591684	140593201	140592442	ENSG00000280326.1	+	TEC	KNOWN	RP11-642A1.1	1	1	0.540044
chr8	140636281	140638283	140637282	ENSG00000280303.2	+	lincRNA	KNOWN	ERICD	1	1	0.533881
chr8	140657900	141002216	140830058	ENSG00000169398.19	-	protein_coding	KNOWN	PTK2	57	33	0.108577
chr8	140732565	140732676	140732620	ENSG00000254324.2	-	miRNA	KNOWN	MIR151A	1	1	0.151581
chr8	140820599	140822414	140821506	ENSG00000279786.1	-	TEC	KNOWN	CTD-2014D20.1	1	1	0.091992
chr8	140880336	140883127	140881731	ENSG00000281855.1	+	protein_coding	KNOWN	AC105009.1	1	4	0.316958
chr8	140940562	140940663	140940612	ENSG00000252864.1	+	rRNA	KNOWN	RNA5SP278	1	1	-0.013618
chr8	141055290	141060596	141057943	ENSG00000253266.1	+	lincRNA	KNOWN	RP11-128L5.1	2	5	0.466627
chr8	141117278	141195808	141156543	ENSG00000105339.10	+	protein_coding	KNOWN	DENND3	22	23	0.569151
chr8	141126044	141129961	141128002	ENSG00000253210.1	-	antisense	KNOWN	RP11-809O17.1	2	2	0.535122
chr8	141207166	141308305	141257735	ENSG00000022567.9	-	protein_coding	KNOWN	SLC45A4	6	8	0.415337
chr8	141224288	141226947	141225617	ENSG00000280035.1	-	TEC	KNOWN	RP11-10J21.2	1	1	0.353577
chr8	141252286	141253292	141252789	ENSG00000253307.1	-	antisense	KNOWN	RP11-10J21.4	1	2	0.322422
chr8	141254565	141256817	141255691	ENSG00000254019.1	+	antisense	KNOWN	RP11-10J21.3	1	2	0.322422
chr8	141278228	141292862	141285545	ENSG00000254197.1	+	lincRNA	KNOWN	RP11-10J21.5	1	2	0.371375
chr8	141326130	141327137	141326633	ENSG00000254291.1	+	antisense	KNOWN	RP11-10J21.6	1	2	0.328059
chr8	141340549	141344621	141342585	ENSG00000253595.5	+	antisense	KNOWN	LINC01300	2	4	0.870395
chr8	141353403	141355365	141354384	ENSG00000261655.1	-	sense_overlapping	KNOWN	CTD-3064M3.3	1	1	0.941086
chr8	141356500	141367267	141361883	ENSG00000204882.3	-	protein_coding	KNOWN	GPR20	1	2	0.941086
chr8	141389939	141392574	141391256	ENSG00000244998.1	-	antisense	KNOWN	CTD-3064M3.4	1	2	0.483781
chr8	141391993	141432454	141412223	ENSG00000184489.11	+	protein_coding	KNOWN	PTP4A3	6	6	0.641375
chr8	141433829	141507230	141470529	ENSG00000226807.6	-	polymorphic_pseudogene	KNOWN	MROH5	5	31	0.257769
chr8	141434545	141437954	141436249	ENSG00000271959.1	+	antisense	KNOWN	CTD-3064M3.7	1	3	0.477017
chr8	141447475	141447549	141447512	ENSG00000238854.1	+	snoRNA	NOVEL	SNORD5	1	1	0.477017
chr8	141459075	141460031	141459553	ENSG00000253605.1	+	processed_pseudogene	KNOWN	HNRNPA1P38	1	1	0.211044
chr8	141514638	141518737	141516687	ENSG00000226490.1	+	lincRNA	KNOWN	AC138647.1	1	2	0.084574
chr8	141945499	141945625	141945562	ENSG00000221123.1	+	miRNA	NOVEL	AC104417.1	1	1	0.492775
chr8	141968091	141968841	141968466	ENSG00000254183.1	-	processed_pseudogene	KNOWN	RP11-953B20.2	1	1	0.046429
chr8	142089827	142091619	142090723	ENSG00000261710.1	+	lincRNA	KNOWN	RP11-953B20.1	1	1	0.107777
chr8	142176339	142176418	142176378	ENSG00000265247.1	+	miRNA	KNOWN	MIR4472-1	1	1	0.230890
chr8	142198356	142209003	142203679	ENSG00000254008.1	+	antisense	KNOWN	LINC00051	1	3	0.217523
chr8	142212080	142403240	142307660	ENSG00000171045.14	-	protein_coding	KNOWN	TSNARE1	8	14	0.334908
chr8	142247585	142247866	142247725	ENSG00000253602.2	-	misc_RNA	KNOWN	RN7SL260P	1	1	0.265185
chr8	142403652	142407028	142405340	ENSG00000261693.1	+	antisense	KNOWN	RP13-467H17.1	1	1	0.310887
chr8	142449430	142545009	142497219	ENSG00000181790.10	+	protein_coding	KNOWN	ADGRB1	5	31	0.518711
chr8	142567260	142572005	142569632	ENSG00000232722.1	-	unitary_pseudogene	KNOWN	MROH4P	1	6	0.548983
chr8	142611044	142614472	142612758	ENSG00000198576.3	-	protein_coding	KNOWN	ARC	2	3	0.698238
chr8	142620373	142621064	142620718	ENSG00000261044.1	+	antisense	KNOWN	AP006547.3	1	1	0.698238
chr8	142638596	142640648	142639622	ENSG00000277332.1	+	antisense	KNOWN	AC145123.2	1	2	0.928139
chr8	142657460	142681968	142669714	ENSG00000234616.8	-	protein_coding	KNOWN	JRK	11	4	0.484562
chr8	142670308	142682724	142676516	ENSG00000167653.4	+	protein_coding	KNOWN	PSCA	4	3	0.827289
chr8	142700111	142705127	142702619	ENSG00000160886.13	+	protein_coding	KNOWN	LY6K	5	3	0.186988
chr8	142702252	142726973	142714612	ENSG00000253741.1	-	antisense	KNOWN	CTD-2292P10.4	1	3	0.176203
chr8	142727203	142736927	142732065	ENSG00000130193.7	+	protein_coding	KNOWN	THEM6	3	3	0.525070
chr8	142727283	142727690	142727486	ENSG00000253806.1	-	antisense	KNOWN	CTD-2292P10.2	1	2	0.171281
chr8	142740944	142742411	142741677	ENSG00000126233.1	-	protein_coding	KNOWN	SLURP1	1	3	0.667852
chr8	142750150	142752534	142751342	ENSG00000197353.3	-	protein_coding	KNOWN	LYPD2	1	3	0.691454
chr8	142763116	142766427	142764771	ENSG00000253196.1	+	antisense	KNOWN	RP11-706C16.7	1	2	0.691454
chr8	142764334	142778224	142771279	ENSG00000180155.18	-	protein_coding	KNOWN	LYNX1	10	5	0.649242
chr8	142784880	142786592	142785736	ENSG00000167656.4	-	protein_coding	KNOWN	LY6D	4	3	0.620168
chr8	142785374	142812120	142798747	ENSG00000253715.1	+	antisense	KNOWN	RP11-706C16.8	1	3	0.500720
chr8	142834138	142834940	142834539	ENSG00000253728.5	-	antisense	KNOWN	RP11-706C16.5	2	2	0.436640
chr8	142834247	142916506	142875376	ENSG00000104499.6	+	protein_coding	KNOWN	GML	2	5	0.127761
chr8	142858354	142858797	142858575	ENSG00000253421.1	+	processed_pseudogene	KNOWN	ZNHIT1P1	1	1	-0.120669
chr8	142872356	142879846	142876101	ENSG00000160882.11	-	protein_coding	KNOWN	CYP11B1	5	11	0.331819
chr8	142910559	142917843	142914201	ENSG00000179142.2	-	protein_coding	KNOWN	CYP11B2	1	9	0.165992
chr8	142981738	143018437	143000087	ENSG00000247317.3	-	lincRNA	KNOWN	RP11-273G15.2	5	3	0.417078
chr8	142995850	142996482	142996166	ENSG00000253971.1	+	processed_pseudogene	KNOWN	CDC42P3	1	1	0.576227
chr8	143017982	143023832	143020907	ENSG00000160932.10	+	protein_coding	KNOWN	LY6E	15	5	0.351079
chr8	143039209	143059942	143049575	ENSG00000177335.10	+	processed_transcript	KNOWN	C8orf31	8	8	0.559766
chr8	143057060	143057816	143057438	ENSG00000250115.2	-	processed_pseudogene	KNOWN	AK3P2	1	2	0.342315
chr8	143065915	143066587	143066251	ENSG00000243328.1	-	processed_pseudogene	KNOWN	RP11-520P18.1	1	2	0.342315
chr8	143080457	143083001	143081729	ENSG00000261667.1	+	protein_coding	KNOWN	RP11-520P18.5	1	4	0.464944
chr8	143157914	143160711	143159312	ENSG00000176956.12	-	protein_coding	KNOWN	LY6H	5	5	0.503248
chr8	143213193	143217170	143215181	ENSG00000277494.1	+	protein_coding	KNOWN	GPIHBP1	1	4	0.884834
chr8	143246821	143262705	143254763	ENSG00000181638.17	+	protein_coding	KNOWN	ZFP41	4	3	0.416775
chr8	143247110	143276403	143261756	ENSG00000264668.1	+	protein_coding	KNOWN	RP13-582O9.6	1	4	0.529005
chr8	143267433	143276931	143272182	ENSG00000250571.6	+	protein_coding	KNOWN	GLI4	11	4	0.815390
chr8	143280161	143281690	143280925	ENSG00000253716.5	-	antisense	KNOWN	MINCR	6	3	0.975739
chr8	143289676	143298061	143293868	ENSG00000185730.7	+	protein_coding	KNOWN	ZNF696	6	4	0.719990
chr8	143290399	143290621	143290510	ENSG00000272172.1	-	antisense	KNOWN	RP13-582O9.7	1	1	0.709744
chr8	143304384	143359979	143332181	ENSG00000184428.12	-	protein_coding	KNOWN	TOP1MT	19	15	0.765044
chr8	143314921	143315006	143314963	ENSG00000263660.1	+	miRNA	NOVEL	AC087793.1	1	1	0.684903
chr8	143350172	143350278	143350225	ENSG00000212221.1	+	snRNA	KNOWN	RNU6-220P	1	1	0.733337
chr8	143366631	143368548	143367589	ENSG00000254389.3	-	antisense	KNOWN	RHPN1-AS1	1	1	0.733337
chr8	143368855	143384220	143376537	ENSG00000158106.12	+	protein_coding	KNOWN	RHPN1	4	15	1.038847
chr8	143412749	143417054	143414901	ENSG00000253931.1	+	antisense	KNOWN	RP11-909N17.2	1	3	1.299088
chr8	143417679	143419150	143418414	ENSG00000254338.1	+	antisense	KNOWN	MAFA-AS1	1	2	1.299088
chr8	143419182	143430406	143424794	ENSG00000182759.3	-	protein_coding	KNOWN	MAFA	2	2	1.296276
chr8	143437655	143541453	143489554	ENSG00000014164.6	-	protein_coding	KNOWN	ZC3H3	2	12	1.168263
chr8	143541973	143549729	143545851	ENSG00000254859.1	-	antisense	KNOWN	RP11-661A12.5	1	2	1.068405
chr8	143542110	143542400	143542255	ENSG00000254144.3	+	antisense	KNOWN	RP11-661A12.4	1	1	1.068405
chr8	143542110	143542398	143542254	ENSG00000275558.1	+	misc_RNA	KNOWN	RN7SKP175	1	1	1.068405
chr8	143553207	143563062	143558134	ENSG00000104518.10	+	protein_coding	KNOWN	GSDMD	16	14	1.118792
chr8	143566187	143572971	143569579	ENSG00000204839.8	-	protein_coding	KNOWN	MROH6	11	14	1.146274
chr8	143573490	143577397	143575443	ENSG00000255050.1	+	antisense	KNOWN	RP11-661A12.9	1	5	1.181523
chr8	143574785	143578649	143576717	ENSG00000147813.15	-	protein_coding	KNOWN	NAPRT	14	13	1.181523
chr8	143578358	143583304	143580831	ENSG00000279605.1	+	TEC	KNOWN	RP11-661A12.8	1	1	1.181523
chr8	143579636	143580670	143580153	ENSG00000254741.1	+	antisense	KNOWN	RP11-661A12.7	1	2	1.181523
chr8	143579697	143599541	143589619	ENSG00000104529.17	-	protein_coding	KNOWN	EEF1D	56	10	1.318637
chr8	143597835	143603224	143600529	ENSG00000179886.5	+	protein_coding	KNOWN	TIGD5	1	1	1.466672
chr8	143603913	143609773	143606843	ENSG00000104524.13	-	protein_coding	KNOWN	PYCRL	7	7	1.466672
chr8	143612618	143618048	143615333	ENSG00000104522.15	-	protein_coding	KNOWN	TSTA3	16	11	1.367435
chr8	143632071	143633756	143632913	ENSG00000254812.1	-	antisense	KNOWN	RP11-661A12.12	1	2	0.991191
chr8	143636013	143656418	143646215	ENSG00000183309.11	+	protein_coding	KNOWN	ZNF623	3	2	0.901255
chr8	143684452	143713898	143699175	ENSG00000181135.15	+	protein_coding	KNOWN	ZNF707	29	8	1.083080
chr8	143696154	143698413	143697283	ENSG00000181097.5	+	antisense	KNOWN	RP11-429J17.2	1	2	1.131520
chr8	143706694	143708109	143707401	ENSG00000255181.3	-	protein_coding	KNOWN	CCDC166	1	2	1.131520
chr8	143709007	143713584	143711295	ENSG00000254574.1	-	antisense	KNOWN	RP11-429J17.4	1	4	1.138987
chr8	143716259	143722458	143719358	ENSG00000181085.14	+	protein_coding	KNOWN	MAPK15	8	14	1.141053
chr8	143718246	143718891	143718568	ENSG00000254548.1	-	antisense	KNOWN	RP11-429J17.5	1	2	1.141053
chr8	143723933	143733801	143728867	ENSG00000180921.6	-	protein_coding	KNOWN	FAM83H	2	5	1.203116
chr8	143733083	143733153	143733118	ENSG00000265660.1	-	miRNA	KNOWN	MIR4664	1	1	1.302137
chr8	143734140	143746337	143740238	ENSG00000203499.10	+	lincRNA	KNOWN	FAM83H-AS1	2	4	1.302137
chr8	143758153	143771822	143764987	ENSG00000254973.1	-	lincRNA	KNOWN	RP11-429J17.7	1	3	0.948238
chr8	143788920	143790459	143789689	ENSG00000214733.8	+	antisense	KNOWN	RP11-429J17.8	3	7	0.962511
chr8	143790920	143815379	143803149	ENSG00000180900.16	-	protein_coding	KNOWN	SCRIB	8	37	1.315868
chr8	143812957	143813042	143812999	ENSG00000216090.1	-	miRNA	KNOWN	MIR937	1	1	1.691345
chr8	143816344	143829859	143823101	ENSG00000179950.13	-	protein_coding	KNOWN	PUF60	22	12	1.691345
chr8	143833270	143834063	143833666	ENSG00000255343.1	-	3prime_overlapping_ncrna	KNOWN	RP11-299M14.2	1	2	1.388766
chr8	143833594	143840974	143837284	ENSG00000185189.15	-	protein_coding	KNOWN	NRBP2	10	18	1.388766
chr8	143837756	143837816	143837786	ENSG00000274094.1	-	miRNA	KNOWN	MIR6845	1	1	1.388766
chr8	143844068	143844153	143844110	ENSG00000264144.1	+	miRNA	NOVEL	AC234917.1	1	1	1.388766
chr8	143857324	143878464	143867894	ENSG00000261150.2	-	protein_coding	KNOWN	EPPK1	2	2	1.476280
chr8	143915147	143976734	143945940	ENSG00000178209.14	-	protein_coding	KNOWN	PLEC	15	33	1.646939
chr8	143945191	143945279	143945235	ENSG00000207574.1	-	miRNA	KNOWN	MIR661	1	1	1.832090
chr8	143977153	144012772	143994962	ENSG00000178685.13	-	protein_coding	KNOWN	PARP10	23	11	1.379150
chr8	143990058	143993415	143991736	ENSG00000178719.16	+	protein_coding	KNOWN	GRINA	10	7	1.264571
chr8	144012414	144047085	144029749	ENSG00000186583.11	+	protein_coding	KNOWN	SPATC1	2	5	1.182673
chr8	144049129	144051522	144050325	ENSG00000204791.8	+	antisense	KNOWN	CTD-3065J16.6	2	6	1.325924
chr8	144051266	144063832	144057549	ENSG00000178814.15	-	protein_coding	KNOWN	OPLAH	4	27	1.273599
chr8	144057321	144057380	144057350	ENSG00000277888.1	-	miRNA	KNOWN	MIR6846	1	1	1.273599
chr8	144078002	144079265	144078633	ENSG00000255224.1	-	antisense	KNOWN	CTD-3065J16.9	1	1	1.075313
chr8	144078626	144080647	144079636	ENSG00000178896.6	+	protein_coding	KNOWN	EXOSC4	3	3	1.075313
chr8	144079874	144079942	144079908	ENSG00000276472.1	+	miRNA	KNOWN	MIR6847	1	1	1.075313
chr8	144082590	144086216	144084403	ENSG00000197858.10	+	protein_coding	KNOWN	GPAA1	18	12	1.075313
chr8	144095027	144097525	144096276	ENSG00000179091.4	+	protein_coding	KNOWN	CYC1	4	7	1.308517
chr8	144098633	144108124	144103378	ENSG00000179526.16	-	protein_coding	KNOWN	SHARPIN	10	9	1.308517
chr8	144104499	144107611	144106055	ENSG00000179632.9	+	protein_coding	KNOWN	MAF1	6	8	1.308517
chr8	144107726	144118315	144113020	ENSG00000179698.13	+	protein_coding	KNOWN	WDR97	6	24	1.526516
chr8	144137769	144140843	144139306	ENSG00000235173.6	+	protein_coding	KNOWN	HGH1	7	7	1.237190
chr8	144141214	144143664	144142439	ENSG00000227473.1	-	unitary_pseudogene	KNOWN	TSSK5P	1	7	1.237190
chr8	144148016	144261940	144204978	ENSG00000179832.17	+	protein_coding	KNOWN	MROH1	11	43	1.170548
chr8	144155898	144155989	144155943	ENSG00000264721.1	-	miRNA	NOVEL	AC104592.1	1	1	0.880073
chr8	144262102	144291370	144276736	ENSG00000261236.5	-	protein_coding	KNOWN	BOP1	6	16	1.649728
chr8	144262673	144262737	144262705	ENSG00000277158.1	-	miRNA	KNOWN	MIR7112	1	1	1.748339
chr8	144266560	144268481	144267520	ENSG00000260428.2	+	protein_coding	KNOWN	SCX	1	2	1.748339
chr8	144291591	144314722	144303156	ENSG00000185122.10	+	protein_coding	KNOWN	HSF1	14	13	1.400358
chr8	144314584	144326910	144320747	ENSG00000185000.9	-	protein_coding	KNOWN	DGAT1	8	17	1.580009
chr8	144314590	144315138	144314864	ENSG00000254690.1	-	antisense	KNOWN	GS1-393G12.12	1	2	1.580009
chr8	144317246	144317315	144317280	ENSG00000276987.1	-	miRNA	KNOWN	MIR6848	1	1	1.580009
chr8	144330565	144336281	144333423	ENSG00000261678.2	-	protein_coding	KNOWN	SCRT1	1	2	1.408176
chr8	144352219	144354914	144353566	ENSG00000261587.2	-	protein_coding	KNOWN	TMEM249	3	5	1.263894
chr8	144353228	144355609	144354418	ENSG00000271698.1	-	protein_coding	KNOWN	GS1-393G12.13	1	6	1.263894
chr8	144354135	144361272	144357703	ENSG00000185803.8	+	protein_coding	KNOWN	SLC52A2	13	5	1.263894
chr8	144355431	144359376	144357403	ENSG00000182325.10	-	protein_coding	KNOWN	FBXL6	9	9	1.263894
chr8	144373101	144393242	144383171	ENSG00000173137.11	+	protein_coding	KNOWN	ADCK5	8	15	1.390968
chr8	144393229	144409349	144401289	ENSG00000071894.14	-	protein_coding	KNOWN	CPSF1	14	38	1.325262
chr8	144394149	144394230	144394189	ENSG00000216133.1	-	miRNA	KNOWN	MIR939	1	1	1.325262
chr8	144400086	144400165	144400125	ENSG00000266624.1	-	miRNA	KNOWN	MIR1234	1	1	1.325262
chr8	144400277	144400345	144400311	ENSG00000274683.1	-	miRNA	KNOWN	MIR6849	1	1	1.325262
chr8	144409492	144409976	144409734	ENSG00000272115.1	+	antisense	KNOWN	GS1-393G12.14	1	1	1.325262
chr8	144409742	144416895	144413318	ENSG00000147804.9	-	protein_coding	KNOWN	SLC39A4	9	12	1.512950
chr8	144423601	144428563	144426082	ENSG00000160948.13	-	protein_coding	KNOWN	VPS28	16	10	1.519945
chr8	144428775	144444444	144436609	ENSG00000160949.16	-	protein_coding	KNOWN	TONSL	3	26	1.758390
chr8	144435551	144435619	144435585	ENSG00000276598.1	-	miRNA	KNOWN	MIR6893	1	1	1.778595
chr8	144437675	144439971	144438823	ENSG00000232600.3	+	antisense	KNOWN	TONSL-AS1	1	4	1.778595
chr8	144449582	144465677	144457629	ENSG00000187954.12	-	protein_coding	KNOWN	CYHR1	12	5	1.401336
chr8	144463817	144465101	144464459	ENSG00000254578.1	+	antisense	KNOWN	CTD-2517M22.16	1	2	1.391302
chr8	144466043	144474202	144470122	ENSG00000167702.11	+	protein_coding	KNOWN	KIFC2	6	17	1.508402
chr8	144473412	144476335	144474873	ENSG00000160973.7	-	protein_coding	KNOWN	FOXH1	2	3	1.618621
chr8	144477969	144502121	144490045	ENSG00000160972.9	+	protein_coding	KNOWN	PPP1R16A	11	11	1.403987
chr8	144495458	144505444	144500451	ENSG00000255182.2	-	processed_transcript	KNOWN	CTD-2517M22.14	5	4	1.190981
chr8	144502973	144507174	144505073	ENSG00000167701.13	+	protein_coding	KNOWN	GPT	7	12	1.190981
chr8	144509074	144511213	144510143	ENSG00000167700.8	+	protein_coding	KNOWN	MFSD3	4	5	1.462832
chr8	144511288	144517845	144514566	ENSG00000160957.12	-	protein_coding	KNOWN	RECQL4	10	21	1.669968
chr8	144512567	144513672	144513119	ENSG00000265393.1	+	antisense	KNOWN	CTD-2517M22.17	1	2	1.669968
chr8	144517992	144525178	144521585	ENSG00000160959.7	+	protein_coding	KNOWN	LRRC14	9	5	1.669968
chr8	144522377	144527032	144524704	ENSG00000254402.6	-	protein_coding	KNOWN	LRRC24	2	5	1.669968
chr8	144525733	144529132	144527432	ENSG00000213563.6	-	protein_coding	KNOWN	C8orf82	5	4	1.669968
chr8	144529179	144605816	144567497	ENSG00000147799.11	-	protein_coding	KNOWN	ARHGAP39	3	11	1.151454
chr8	144567307	144567392	144567349	ENSG00000265295.1	+	miRNA	NOVEL	AC084125.1	1	1	1.181075
chr8	144584040	144586488	144585264	ENSG00000255456.1	+	antisense	KNOWN	CTD-2517M22.9	1	2	0.797467
chr8	144683169	144683464	144683316	ENSG00000274772.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.710230
chr8	144698614	144699185	144698899	ENSG00000254533.1	-	lincRNA	KNOWN	AF186192.1	1	1	0.891693
chr8	144700353	144708517	144704435	ENSG00000255085.8	+	transcribed_unprocessed_pseudogene	KNOWN	AF186192.5	5	3	0.891693
chr8	144713899	144714845	144714372	ENSG00000263612.1	+	lincRNA	KNOWN	AF186192.6	1	1	0.868924
chr8	144720907	144756417	144738662	ENSG00000198169.8	-	protein_coding	KNOWN	ZNF251	4	5	0.906460
chr8	144773114	144787345	144780229	ENSG00000196378.11	-	protein_coding	KNOWN	ZNF34	5	6	1.129467
chr8	144785298	144785588	144785443	ENSG00000244307.3	+	misc_RNA	KNOWN	RN7SL395P	1	1	1.129467
chr8	144789765	144792587	144791176	ENSG00000161016.15	-	protein_coding	KNOWN	RPL8	14	6	1.342793
chr8	144791931	144791991	144791961	ENSG00000274673.1	-	miRNA	KNOWN	MIR6850	1	1	1.362081
chr8	144798876	144811169	144805022	ENSG00000197363.9	+	protein_coding	KNOWN	ZNF517	8	6	1.324208
chr8	144827464	144847509	144837486	ENSG00000147789.15	+	protein_coding	KNOWN	ZNF7	18	6	1.095735
chr8	144841042	144853736	144847389	ENSG00000170619.9	-	protein_coding	KNOWN	COMMD5	7	2	1.076599
chr8	144853413	144853522	144853467	ENSG00000263640.1	+	miRNA	NOVEL	AF235103.1	1	1	0.985077
chr8	144876497	144902168	144889332	ENSG00000196150.13	-	protein_coding	KNOWN	ZNF250	10	7	0.520267
chr8	144930358	144950888	144940623	ENSG00000170631.14	-	protein_coding	KNOWN	ZNF16	9	4	0.581876
chr8	144973589	145002895	144988242	ENSG00000196922.10	-	unitary_pseudogene	KNOWN	ZNF252P	8	5	0.211747
chr8	144992914	144994837	144993875	ENSG00000255164.1	+	antisense	KNOWN	RP5-1047A19.4	1	2	0.346309
chr8	144994886	144995540	144995213	ENSG00000254618.1	+	processed_pseudogene	KNOWN	TMED10P1	1	1	0.346309
chr8	145002811	145006046	145004428	ENSG00000255559.1	+	antisense	KNOWN	ZNF252P-AS1	1	1	0.346309
chr8	145005561	145005906	145005733	ENSG00000255530.1	-	processed_pseudogene	KNOWN	RP5-1047A19.6	1	1	0.346309
chr8	145047860	145048889	145048374	ENSG00000255000.1	+	processed_pseudogene	KNOWN	AC139103.1	1	1	0.202175
chr8	145052378	145056030	145054204	ENSG00000182307.12	+	protein_coding	KNOWN	C8orf33	5	5	0.348848
chr9	12134	13783	12958	ENSG00000236875.3	+	unprocessed_pseudogene	KNOWN	DDX11L5	1	6	0.993588
chr9	14521	29739	22130	ENSG00000181404.15	-	protein_coding	KNOWN	WASH1	1	11	0.993588
chr9	17480	17547	17513	ENSG00000275076.1	-	miRNA	NOVEL	AL928970.1	1	1	0.993588
chr9	27657	30891	29274	ENSG00000227518.3	+	antisense	KNOWN	XXyac-YRM2039.3	1	2	0.916484
chr9	30144	30281	30212	ENSG00000278579.1	+	miRNA	KNOWN	MIR1302-9	1	1	0.714044
chr9	34394	35871	35132	ENSG00000218839.4	-	lincRNA	KNOWN	FAM138C	2	3	0.714044
chr9	72674	88826	80750	ENSG00000277631.4	+	lincRNA	KNOWN	PGM5P3-AS1	7	4	0.077565
chr9	100804	102941	101872	ENSG00000227917.2	-	lincRNA	KNOWN	RP11-143M1.3	2	3	-0.040902
chr9	112713	113754	113233	ENSG00000231808.2	-	lincRNA	KNOWN	LINC01388	1	2	0.317284
chr9	116231	118204	117217	ENSG00000170122.5	-	protein_coding	KNOWN	FOXD4	1	1	0.317284
chr9	121038	179147	150092	ENSG00000172785.18	-	protein_coding	KNOWN	CBWD1	29	16	-0.314913
chr9	212824	215741	214282	ENSG00000183784.6	-	protein_coding	KNOWN	C9orf66	1	1	-0.331979
chr9	214854	465259	340056	ENSG00000107099.15	+	protein_coding	KNOWN	DOCK8	17	48	-0.116473
chr9	267966	273002	270484	ENSG00000235880.1	-	antisense	KNOWN	RP11-59O6.3	1	2	-0.087477
chr9	452492	492248	472370	ENSG00000227155.7	-	antisense	KNOWN	RP11-165F24.3	16	5	0.078163
chr9	470291	746106	608198	ENSG00000107104.18	+	protein_coding	KNOWN	KANK1	10	16	0.026378
chr9	477750	478423	478086	ENSG00000235330.2	+	transcribed_processed_pseudogene	KNOWN	RPL12P25	2	1	0.169528
chr9	487774	495610	491692	ENSG00000228115.1	+	sense_intronic	KNOWN	RP11-165F24.5	1	2	-0.115226
chr9	547317	549531	548424	ENSG00000226403.1	+	sense_intronic	KNOWN	RP11-31F19.1	2	2	0.109167
chr9	558826	558930	558878	ENSG00000202172.1	+	snRNA	KNOWN	RNU6-1327P	1	1	-0.107849
chr9	659986	660326	660156	ENSG00000229875.1	+	processed_pseudogene	KNOWN	EIF1P1	1	1	0.142032
chr9	673478	685555	679516	ENSG00000227914.3	-	antisense	KNOWN	RP11-130C19.3	2	3	-0.273802
chr9	841690	969090	905390	ENSG00000137090.11	+	protein_coding	KNOWN	DMRT1	3	5	-0.021115
chr9	976964	991731	984347	ENSG00000064218.4	+	protein_coding	KNOWN	DMRT3	2	2	0.073262
chr9	1001858	1001963	1001910	ENSG00000252991.1	-	snRNA	KNOWN	RNU6-1073P	1	1	0.060797
chr9	1011085	1011799	1011442	ENSG00000228783.1	+	processed_pseudogene	KNOWN	RP11-147I11.1	1	2	-0.141599
chr9	1045625	1048641	1047133	ENSG00000281769.1	+	lincRNA	KNOWN	LINC01230	1	1	-0.181385
chr9	1049858	1057552	1053705	ENSG00000173253.15	+	protein_coding	KNOWN	DMRT2	9	6	0.308031
chr9	1151807	1152140	1151973	ENSG00000224836.1	-	processed_pseudogene	KNOWN	RP11-341G2.3	1	1	-0.672792
chr9	1164414	1164867	1164640	ENSG00000236594.2	-	processed_pseudogene	KNOWN	RPS27AP14	1	1	-0.672792
chr9	1328664	1328987	1328825	ENSG00000233575.2	+	processed_pseudogene	KNOWN	RP11-459D20.1	1	1	-0.186309
chr9	1333837	1333953	1333895	ENSG00000202383.1	+	rRNA	KNOWN	RNA5SP279	1	1	-0.406348
chr9	1977784	1978547	1978165	ENSG00000224092.1	-	processed_pseudogene	KNOWN	RP11-443B9.1	1	1	-0.267551
chr9	2015219	2193624	2104421	ENSG00000080503.20	+	protein_coding	KNOWN	SMARCA2	45	34	0.036901
chr9	2041900	2046023	2043961	ENSG00000236199.1	-	antisense	KNOWN	RP11-264I13.2	1	2	-0.195705
chr9	2162763	2162953	2162858	ENSG00000222973.1	-	snRNA	KNOWN	RNU2-25P	1	1	0.216798
chr9	2228961	2229241	2229101	ENSG00000264615.2	-	misc_RNA	KNOWN	RN7SL592P	1	1	-0.091720
chr9	2422702	2643359	2533030	ENSG00000236404.8	-	antisense	KNOWN	VLDLR-AS1	5	11	0.081551
chr9	2541097	2541635	2541366	ENSG00000231052.1	+	lincRNA	KNOWN	RP11-91N2.3	1	2	-0.142872
chr9	2621834	2660053	2640943	ENSG00000147852.15	+	protein_coding	KNOWN	VLDLR	4	19	0.376121
chr9	2717502	2730037	2723769	ENSG00000168263.8	+	protein_coding	KNOWN	KCNV2	1	2	0.020648
chr9	2720469	2844241	2782355	ENSG00000080608.9	-	protein_coding	KNOWN	PUM3	4	18	0.165182
chr9	2875442	2876427	2875934	ENSG00000236496.2	-	processed_pseudogene	KNOWN	GPS2P1	1	1	-0.140669
chr9	2900320	2900804	2900562	ENSG00000229184.2	-	processed_pseudogene	KNOWN	ATP5HP2	1	1	-0.601030
chr9	2907073	3053408	2980240	ENSG00000227835.8	-	transcribed_unprocessed_pseudogene	KNOWN	CARM1P1	4	11	-0.348542
chr9	2924321	2924407	2924364	ENSG00000221450.3	-	miRNA	NOVEL	AL589675.1	1	1	-0.014923
chr9	3181589	3198517	3190053	ENSG00000236511.1	+	lincRNA	KNOWN	LINC01231	1	4	-0.160351
chr9	3218297	3526004	3372150	ENSG00000080298.15	-	protein_coding	KNOWN	RFX3	12	18	-0.414213
chr9	3364329	3364792	3364560	ENSG00000215297.3	-	processed_pseudogene	KNOWN	RP11-62E14.2	1	1	-0.510673
chr9	3452305	3453987	3453146	ENSG00000279745.1	-	protein_coding	KNOWN	AL365202.1	1	3	-0.386662
chr9	3526723	3691814	3609268	ENSG00000232104.3	+	lincRNA	KNOWN	RFX3-AS1	3	6	-0.268392
chr9	3647335	3648338	3647836	ENSG00000237359.1	+	lincRNA	KNOWN	RP11-509J21.2	1	2	0.032695
chr9	3684076	3689626	3686851	ENSG00000226669.2	-	lincRNA	KNOWN	RP11-509J21.4	1	2	-0.419509
chr9	3824127	4348392	4086259	ENSG00000107249.21	-	protein_coding	KNOWN	GLIS3	17	11	0.082264
chr9	3875584	3878809	3877196	ENSG00000236724.1	+	antisense	KNOWN	RP11-252M18.3	1	2	0.030880
chr9	3898642	3901248	3899945	ENSG00000237009.2	+	antisense	KNOWN	GLIS3-AS1	1	2	0.029595
chr9	4070906	4071884	4071395	ENSG00000230001.1	-	sense_intronic	KNOWN	RP11-70J12.1	1	2	0.359925
chr9	4299390	4306046	4302718	ENSG00000228322.1	+	antisense	KNOWN	RP11-358M14.2	1	2	-0.017419
chr9	4378423	4378494	4378458	ENSG00000221730.1	-	miRNA	NOVEL	AL162419.1	1	1	-0.014923
chr9	4386410	4386556	4386483	ENSG00000200941.1	-	snRNA	KNOWN	RNU6-694P	1	1	-0.014923
chr9	4490444	4587469	4538956	ENSG00000106688.11	+	protein_coding	KNOWN	SLC1A1	3	12	-0.001766
chr9	4553386	4666674	4610030	ENSG00000106686.16	-	protein_coding	KNOWN	SPATA6L	13	17	-0.002532
chr9	4633027	4633756	4633391	ENSG00000225893.1	+	processed_pseudogene	KNOWN	RP11-6J24.3	1	1	-0.303937
chr9	4662315	4665258	4663786	ENSG00000205808.5	+	protein_coding	KNOWN	PLPP6	1	1	-0.094971
chr9	4676600	4679502	4678051	ENSG00000273061.1	-	lincRNA	KNOWN	CDC37L1-AS1	2	2	0.028913
chr9	4679559	4708398	4693978	ENSG00000106993.11	+	protein_coding	KNOWN	CDC37L1	3	7	-0.003180
chr9	4709559	4742043	4725801	ENSG00000147853.16	-	protein_coding	KNOWN	AK3	4	5	0.207517
chr9	4719746	4719841	4719793	ENSG00000276893.1	-	miRNA	NOVEL	AL136231.1	1	1	0.136114
chr9	4768617	4769895	4769256	ENSG00000270639.1	-	processed_pseudogene	KNOWN	ECM1P1	1	1	0.164142
chr9	4781475	4782078	4781776	ENSG00000220105.2	-	processed_pseudogene	KNOWN	RP11-307I14.2	1	1	-0.019654
chr9	4792869	4885917	4839393	ENSG00000120158.11	+	protein_coding	KNOWN	RCL1	9	9	0.133711
chr9	4803788	4804972	4804380	ENSG00000233186.2	-	processed_pseudogene	KNOWN	KLF4P1	1	1	0.355026
chr9	4850291	4850381	4850336	ENSG00000199065.2	+	miRNA	KNOWN	MIR101-2	1	1	-0.191462
chr9	4850299	4850373	4850336	ENSG00000228165.1	-	antisense	KNOWN	RP11-125K10.5	1	1	-0.191462
chr9	4944670	4945902	4945286	ENSG00000220937.3	-	processed_pseudogene	KNOWN	HNRNPA1P41	1	2	0.091992
chr9	4968097	4968185	4968141	ENSG00000238362.1	+	miRNA	NOVEL	AL158147.1	1	1	-0.114459
chr9	4985033	5128183	5056608	ENSG00000096968.12	+	protein_coding	KNOWN	JAK2	3	25	-0.235492
chr9	5040945	5041940	5041442	ENSG00000234534.1	+	processed_pseudogene	KNOWN	CSNK1G2P1	1	2	-0.163847
chr9	5084999	5086112	5085555	ENSG00000182347.10	-	processed_pseudogene	KNOWN	PDSS1P1	1	1	-0.080475
chr9	5091093	5091604	5091348	ENSG00000227730.2	+	unprocessed_pseudogene	KNOWN	MTND6P5	1	1	-0.481383
chr9	5094139	5095014	5094576	ENSG00000228166.1	+	unprocessed_pseudogene	KNOWN	MTND1P11	1	1	-0.481383
chr9	5096666	5098193	5097429	ENSG00000224083.1	+	unprocessed_pseudogene	KNOWN	RP11-39K24.4	1	1	-0.481383
chr9	5098341	5099325	5098833	ENSG00000235917.1	+	unprocessed_pseudogene	KNOWN	MTCO2P11	1	2	-0.481383
chr9	5099560	5100229	5099894	ENSG00000228097.1	+	unprocessed_pseudogene	KNOWN	MTATP6P11	1	1	-0.481383
chr9	5100236	5101009	5100622	ENSG00000237711.1	+	unprocessed_pseudogene	KNOWN	MTCO3P11	1	1	-0.481383
chr9	5107937	5109290	5108613	ENSG00000236254.1	+	unprocessed_pseudogene	KNOWN	MTND4P14	1	1	-0.481383
chr9	5109496	5110762	5110129	ENSG00000230225.1	+	unprocessed_pseudogene	KNOWN	MTND5P14	1	1	-0.106833
chr9	5110913	5112849	5111881	ENSG00000236567.2	+	processed_pseudogene	KNOWN	TCF3P1	1	1	0.140086
chr9	5113549	5114804	5114176	ENSG00000254017.1	+	IG_C_pseudogene	KNOWN	IGHEP2	1	1	0.140086
chr9	5131979	5185668	5158823	ENSG00000120210.6	-	protein_coding	KNOWN	INSL6	2	4	-0.230581
chr9	5193339	5193558	5193448	ENSG00000237553.1	-	processed_pseudogene	KNOWN	RP11-140C18.2	1	1	-0.441227
chr9	5231419	5235304	5233361	ENSG00000120211.4	+	protein_coding	KNOWN	INSL4	1	2	-0.587608
chr9	5299868	5304969	5302418	ENSG00000107014.8	-	protein_coding	KNOWN	RLN2	2	3	-0.481383
chr9	5311444	5311716	5311580	ENSG00000214195.4	+	processed_pseudogene	KNOWN	HMGN2P31	1	1	-0.390285
chr9	5334969	5339873	5337421	ENSG00000107018.7	-	protein_coding	KNOWN	RLN1	2	2	-0.127575
chr9	5351796	5352410	5352103	ENSG00000272866.1	-	lincRNA	KNOWN	RP11-12D24.10	1	1	-0.313265
chr9	5356312	5356525	5356418	ENSG00000231967.1	-	processed_pseudogene	KNOWN	RP11-12D24.6	1	1	-0.313265
chr9	5357973	5437878	5397925	ENSG00000107020.9	-	protein_coding	KNOWN	PLGRKT	4	6	-0.220558
chr9	5418373	5418976	5418674	ENSG00000214190.2	-	processed_pseudogene	KNOWN	RNF152P1	1	1	-0.148271
chr9	5450503	5470566	5460534	ENSG00000120217.13	+	protein_coding	KNOWN	CD274	5	7	-0.014443
chr9	5510570	5571254	5540912	ENSG00000197646.7	+	protein_coding	KNOWN	PDCD1LG2	1	7	0.104228
chr9	5584490	5588994	5586742	ENSG00000231509.1	+	lincRNA	KNOWN	RP11-574F11.3	1	2	0.331662
chr9	5629025	5776557	5702791	ENSG00000107036.11	+	protein_coding	KNOWN	RIC1	7	26	0.106066
chr9	5719021	5720244	5719632	ENSG00000225408.1	-	antisense	KNOWN	RP11-207C16.4	1	2	0.192219
chr9	5765076	5833117	5799096	ENSG00000099219.13	-	protein_coding	KNOWN	ERMP1	6	16	0.103106
chr9	5855781	5856426	5856103	ENSG00000223621.1	-	processed_pseudogene	KNOWN	AK4P4	1	1	0.295084
chr9	5881596	6007901	5944748	ENSG00000183354.11	-	protein_coding	KNOWN	KIAA2026	6	8	-0.127271
chr9	5890802	5910606	5900704	ENSG00000120215.9	+	protein_coding	KNOWN	MLANA	5	6	0.145230
chr9	6007826	6007904	6007865	ENSG00000263575.1	+	miRNA	KNOWN	MIR4665	1	1	-0.232137
chr9	6011043	6015625	6013334	ENSG00000137040.9	-	protein_coding	KNOWN	RANBP6	3	2	0.226085
chr9	6047360	6066714	6057037	ENSG00000228739.1	+	lincRNA	KNOWN	RP11-218I7.2	1	2	0.061891
chr9	6195934	6197248	6196591	ENSG00000237274.2	+	processed_pseudogene	KNOWN	GTF3AP1	1	2	-0.194479
chr9	6215786	6257983	6236884	ENSG00000137033.11	+	protein_coding	KNOWN	IL33	5	7	-0.174838
chr9	6276640	6276974	6276807	ENSG00000228132.2	+	processed_pseudogene	KNOWN	RP11-279E1.1	1	1	-0.020708
chr9	6278667	6279153	6278910	ENSG00000233846.2	+	processed_pseudogene	KNOWN	RP11-307L3.2	1	1	-0.020708
chr9	6328375	6331900	6330137	ENSG00000170777.10	+	protein_coding	KNOWN	TPD52L3	3	2	-0.049175
chr9	6413151	6507054	6460102	ENSG00000147854.16	+	protein_coding	KNOWN	UHRF2	13	17	0.142486
chr9	6415145	6449558	6432351	ENSG00000233367.1	-	antisense	KNOWN	RP11-307L3.4	1	2	0.219198
chr9	6532464	6645650	6589057	ENSG00000178445.8	-	protein_coding	KNOWN	GLDC	5	25	0.028715
chr9	6542094	6542353	6542223	ENSG00000264530.2	+	misc_RNA	KNOWN	RN7SL25P	1	1	0.192596
chr9	6568844	6569360	6569102	ENSG00000237158.1	+	processed_pseudogene	KNOWN	RP11-472F14.4	1	1	0.061935
chr9	6639139	6639604	6639371	ENSG00000206147.5	+	processed_pseudogene	KNOWN	RPL23AP57	1	1	0.184021
chr9	6645956	6670635	6658295	ENSG00000236924.1	+	lincRNA	KNOWN	RP11-390F4.6	1	3	-0.076413
chr9	6661651	6661942	6661796	ENSG00000266863.2	+	misc_RNA	KNOWN	RN7SL123P	1	1	-0.130401
chr9	6662424	6663792	6663108	ENSG00000229057.1	+	processed_pseudogene	KNOWN	RPS3AP54	1	3	-0.130401
chr9	6668999	6670008	6669503	ENSG00000231381.2	-	processed_pseudogene	KNOWN	RNF2P1	1	1	-0.129543
chr9	6675284	6675614	6675449	ENSG00000232946.1	+	processed_pseudogene	KNOWN	RP11-390F4.2	1	1	-0.034226
chr9	6704471	6707780	6706125	ENSG00000229611.1	+	lincRNA	KNOWN	RP11-390F4.10	1	2	0.206249
chr9	6716495	6727438	6721966	ENSG00000225489.6	+	lincRNA	KNOWN	RP11-390F4.3	4	6	0.233720
chr9	6720863	7077263	6899063	ENSG00000274527.5	+	protein_coding	KNOWN	RP11-146B14.1	1	18	-0.031033
chr9	6720949	7076451	6898700	ENSG00000282960.1	+	protein_coding	KNOWN	AL513412.1	1	18	-0.030425
chr9	6734598	6735076	6734837	ENSG00000231108.2	-	processed_pseudogene	KNOWN	PRELID3BP11	1	1	-0.077933
chr9	6748703	6748981	6748842	ENSG00000256968.1	-	processed_pseudogene	KNOWN	SNRPEP2	1	1	-0.077933
chr9	6757641	7175648	6966644	ENSG00000107077.17	+	protein_coding	KNOWN	KDM4C	14	22	-0.055359
chr9	6834456	6835577	6835016	ENSG00000230581.2	+	processed_pseudogene	KNOWN	ACTG1P14	1	1	0.324034
chr9	6902670	6978859	6940764	ENSG00000224972.1	+	sense_intronic	KNOWN	RP11-403H13.1	1	4	-0.104235
chr9	7477045	7478320	7477682	ENSG00000230207.1	-	processed_pseudogene	KNOWN	RPL4P5	1	1	-0.268303
chr9	7597823	7598377	7598100	ENSG00000178654.11	+	processed_pseudogene	KNOWN	PPIAP33	1	1	-0.360076
chr9	7624260	7624354	7624307	ENSG00000276273.1	-	miRNA	NOVEL	AL591509.1	1	1	-0.277958
chr9	7786105	7786688	7786396	ENSG00000273056.1	-	lincRNA	KNOWN	RP11-77E14.2	1	1	0.001480
chr9	7796490	7888380	7842435	ENSG00000137038.7	-	protein_coding	KNOWN	TMEM261	3	3	-0.306335
chr9	7930827	7935137	7932982	ENSG00000226376.1	-	lincRNA	KNOWN	RP11-29B9.1	1	3	-0.289315
chr9	7960413	7961080	7960746	ENSG00000231902.1	-	lincRNA	KNOWN	RP11-29B9.2	1	2	-0.507185
chr9	8314246	10612723	9463484	ENSG00000153707.15	-	protein_coding	KNOWN	PTPRD	14	43	-0.533618
chr9	8700595	8701552	8701073	ENSG00000235389.2	-	sense_intronic	KNOWN	RP11-134K1.3	1	2	-0.619287
chr9	8713311	8713841	8713576	ENSG00000212695.5	+	processed_pseudogene	KNOWN	RP11-134K1.2	1	1	-0.185542
chr9	8797135	8797194	8797164	ENSG00000239102.1	+	snRNA	KNOWN	RNU7-185P	1	1	-0.509746
chr9	8858130	8862255	8860192	ENSG00000225706.1	+	lincRNA	KNOWN	PTPRD-AS1	2	2	-0.587830
chr9	8919806	8919947	8919876	ENSG00000280796.1	-	sRNA	NOVEL	Clostridiales-1	1	1	-0.855541
chr9	8936079	8963077	8949578	ENSG00000234021.1	+	lincRNA	KNOWN	RP11-75C9.2	1	4	-0.380324
chr9	9090898	9091245	9091071	ENSG00000212829.8	+	processed_pseudogene	KNOWN	RPS26P3	1	1	-0.184662
chr9	9425461	9425558	9425509	ENSG00000221708.2	-	miRNA	NOVEL	AL353733.1	1	1	-0.619382
chr9	9442060	9442380	9442220	ENSG00000265735.2	+	misc_RNA	KNOWN	RN7SL5P	1	1	-0.449381
chr9	9799423	9803784	9801603	ENSG00000230920.1	+	lincRNA	KNOWN	RP11-527D15.1	1	3	-0.549554
chr9	10532145	10532411	10532278	ENSG00000234360.1	+	processed_pseudogene	KNOWN	RP11-87N24.1	1	1	-0.686794
chr9	10613202	10620420	10616811	ENSG00000226717.2	+	lincRNA	KNOWN	PTPRD-AS2	1	3	-0.589479
chr9	10631750	10632203	10631976	ENSG00000232035.1	-	lincRNA	KNOWN	RP11-87N24.3	1	2	-0.926156
chr9	10777357	10777525	10777441	ENSG00000227138.1	+	processed_pseudogene	KNOWN	RP11-421B23.2	1	1	-0.198401
chr9	10829752	10830308	10830030	ENSG00000230589.1	-	processed_pseudogene	KNOWN	IMP3P1	1	1	-0.336891
chr9	10948372	10948481	10948426	ENSG00000270372.1	-	lincRNA	KNOWN	RP11-109M17.2	1	1	-0.369739
chr9	11011748	11013096	11012422	ENSG00000234146.1	+	processed_pseudogene	KNOWN	AKAP8P1	1	1	-0.441440
chr9	11275314	11276314	11275814	ENSG00000230365.1	-	lincRNA	KNOWN	RP11-23D5.1	1	2	-0.438523
chr9	11618496	11618621	11618558	ENSG00000275130.1	-	unprocessed_pseudogene	KNOWN	RP11-32D4.1	1	1	-0.437476
chr9	12098660	12159147	12128903	ENSG00000224935.1	-	lincRNA	KNOWN	RP11-74C3.1	1	4	-0.607253
chr9	12287320	12288238	12287779	ENSG00000231491.2	+	processed_pseudogene	KNOWN	JKAMPP1	1	1	-0.522457
chr9	12300266	12300451	12300358	ENSG00000222581.1	-	snRNA	KNOWN	RNU2-47P	1	1	-0.323046
chr9	12685439	12710290	12697864	ENSG00000107165.12	+	protein_coding	KNOWN	TYRP1	7	8	-0.532876
chr9	12700100	12814345	12757222	ENSG00000235448.1	-	antisense	KNOWN	LURAP1L-AS1	1	4	-0.173942
chr9	12764761	12765055	12764908	ENSG00000243115.3	-	misc_RNA	KNOWN	RN7SL849P	1	1	-0.072238
chr9	12775021	12822131	12798576	ENSG00000153714.5	+	protein_coding	KNOWN	LURAP1L	2	2	-0.086762
chr9	12885321	12885417	12885369	ENSG00000222658.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.492971
chr9	12972843	12973438	12973140	ENSG00000214121.4	-	processed_pseudogene	KNOWN	PRDX1P1	1	1	-0.196578
chr9	13021694	13022892	13022293	ENSG00000234586.2	-	processed_pseudogene	KNOWN	RP11-382H24.2	1	1	-0.348581
chr9	13105704	13279590	13192647	ENSG00000107186.16	-	protein_coding	KNOWN	MPDZ	19	48	-0.232738
chr9	13274510	13279187	13276848	ENSG00000234740.1	-	sense_intronic	KNOWN	RP11-272P10.2	1	3	-0.314001
chr9	13322806	13323450	13323128	ENSG00000223672.2	-	processed_pseudogene	KNOWN	RP11-272P10.3	1	1	0.030962
chr9	13406380	13433053	13419716	ENSG00000270547.5	-	lincRNA	KNOWN	LINC01235	2	3	-0.142396
chr9	13446491	13487511	13467001	ENSG00000226197.2	+	lincRNA	KNOWN	RP11-536O18.1	1	2	-0.254818
chr9	13927971	13945610	13936790	ENSG00000205636.3	+	lincRNA	KNOWN	LINC00583	1	3	-0.504978
chr9	13986175	13987909	13987042	ENSG00000229268.1	+	processed_pseudogene	KNOWN	PES1P2	1	1	-0.119115
chr9	14025971	14030115	14028043	ENSG00000235533.1	+	lincRNA	KNOWN	RP11-284P20.3	1	3	-0.192884
chr9	14040716	14041861	14041288	ENSG00000223568.1	-	processed_pseudogene	KNOWN	RPL3P11	1	1	-0.338643
chr9	14068932	14069417	14069174	ENSG00000213954.3	+	processed_pseudogene	KNOWN	ATP5HP3	1	1	-0.228049
chr9	14081843	14398983	14240413	ENSG00000147862.14	-	protein_coding	KNOWN	NFIB	14	12	-0.211189
chr9	14204248	14205039	14204643	ENSG00000234982.1	+	processed_pseudogene	KNOWN	RP11-280O24.3	1	1	-0.563180
chr9	14317085	14357908	14337496	ENSG00000225472.1	+	antisense	KNOWN	RP11-120J1.1	2	2	-0.123063
chr9	14531916	14532042	14531979	ENSG00000237137.1	-	processed_pseudogene	KNOWN	RP11-408A13.2	1	1	-0.208875
chr9	14586766	14587326	14587046	ENSG00000273399.2	-	lincRNA	KNOWN	RP11-408A13.3	1	1	0.032049
chr9	14588797	14590065	14589431	ENSG00000272871.1	-	lincRNA	KNOWN	RP11-408A13.4	1	1	0.023148
chr9	14593577	14594200	14593888	ENSG00000229029.2	+	processed_pseudogene	KNOWN	CDCA4P1	1	1	-0.138963
chr9	14611071	14693471	14652271	ENSG00000175893.11	-	protein_coding	KNOWN	ZDHHC21	2	10	-0.331455
chr9	14719724	14722717	14721220	ENSG00000147869.4	-	protein_coding	KNOWN	CER1	1	2	-0.543597
chr9	14734666	14910995	14822830	ENSG00000164946.19	-	protein_coding	KNOWN	FREM1	9	38	-0.255870
chr9	14850429	14850535	14850482	ENSG00000199814.1	+	snRNA	KNOWN	RNU6-1260P	1	1	-0.229936
chr9	14921337	14922334	14921835	ENSG00000214110.3	-	processed_pseudogene	KNOWN	LDHAP4	1	1	-0.193680
chr9	14987302	15146401	15066851	ENSG00000232000.2	-	transcribed_unprocessed_pseudogene	KNOWN	CLCN3P1	2	10	-0.224862
chr9	14993312	15019729	15006520	ENSG00000215237.6	+	unprocessed_pseudogene	KNOWN	RP11-54D18.2	1	8	-0.047063
chr9	15055057	15056052	15055554	ENSG00000234297.2	+	processed_pseudogene	KNOWN	RP11-54D18.4	1	1	-0.547418
chr9	15143289	15143386	15143337	ENSG00000251960.1	+	snRNA	KNOWN	RNU6-559P	1	1	0.100453
chr9	15163622	15307360	15235491	ENSG00000155158.20	-	protein_coding	KNOWN	TTC39B	9	20	-0.005683
chr9	15361393	15362134	15361763	ENSG00000215236.3	+	processed_pseudogene	KNOWN	RPL7P33	1	1	-0.036332
chr9	15422704	15465953	15444328	ENSG00000164975.15	+	protein_coding	KNOWN	SNAPC3	7	12	0.137749
chr9	15431899	15432006	15431952	ENSG00000251834.1	-	snRNA	KNOWN	RNU6-319P	1	1	0.036950
chr9	15464066	15511019	15487542	ENSG00000164985.14	-	protein_coding	KNOWN	PSIP1	11	16	-0.123752
chr9	15524576	15524707	15524641	ENSG00000278754.1	-	processed_pseudogene	KNOWN	RP11-518K17.4	1	1	-0.172603
chr9	15525782	15526081	15525931	ENSG00000240613.3	-	misc_RNA	KNOWN	RN7SL98P	1	1	-0.172603
chr9	15527133	15527683	15527408	ENSG00000213362.3	-	processed_pseudogene	KNOWN	FTH1P12	1	1	-0.172603
chr9	15544188	15544294	15544241	ENSG00000207433.1	+	snRNA	KNOWN	RNU6-246P	1	1	-0.027918
chr9	15552897	16061663	15807280	ENSG00000164989.15	+	protein_coding	KNOWN	CCDC171	10	26	-0.240884
chr9	15588355	15588615	15588485	ENSG00000231376.1	+	processed_pseudogene	KNOWN	HMGN2P16	1	1	-0.234112
chr9	15776181	15776286	15776233	ENSG00000207360.1	-	snRNA	KNOWN	RNU6-14P	1	1	-0.363688
chr9	16203935	16276313	16240124	ENSG00000205549.8	-	protein_coding	KNOWN	C9orf92	3	4	0.414314
chr9	16340098	16340232	16340165	ENSG00000281869.1	+	sRNA	NOVEL	Clostridiales-1	1	1	0.465722
chr9	16409503	16870843	16640173	ENSG00000173068.17	-	protein_coding	KNOWN	BNC2	14	9	0.034808
chr9	16473188	16476237	16474712	ENSG00000231756.1	+	antisense	KNOWN	RP11-183I6.2	1	2	0.142618
chr9	16625676	16626390	16626033	ENSG00000230694.1	+	antisense	KNOWN	RP11-62F24.1	1	2	0.185706
chr9	16726814	16727524	16727169	ENSG00000234779.1	+	antisense	KNOWN	RP11-62F24.2	1	3	0.190294
chr9	16775573	16775845	16775709	ENSG00000233551.2	-	processed_pseudogene	KNOWN	LSM1P1	1	1	0.331745
chr9	17048919	17112815	17080867	ENSG00000237153.1	+	lincRNA	KNOWN	RP11-132E11.2	1	2	-0.111157
chr9	17053901	17054204	17054052	ENSG00000241152.3	+	misc_RNA	KNOWN	RN7SL720P	1	1	-0.110052
chr9	17096301	17096446	17096373	ENSG00000226470.1	-	processed_pseudogene	KNOWN	RP11-132E11.3	1	1	-0.196634
chr9	17108304	17108604	17108454	ENSG00000237083.1	-	processed_pseudogene	KNOWN	RP11-132E11.4	1	1	-0.196634
chr9	17134982	17503923	17319452	ENSG00000044459.14	+	protein_coding	KNOWN	CNTLN	4	26	-0.279539
chr9	17447145	17448543	17447844	ENSG00000224488.1	-	processed_pseudogene	KNOWN	SAMM50P1	1	1	-0.554371
chr9	17579082	17797129	17688105	ENSG00000107295.9	+	protein_coding	KNOWN	SH3GL2	2	9	-0.268010
chr9	17589161	17591318	17590239	ENSG00000228810.1	-	processed_pseudogene	KNOWN	PABPC1P11	1	2	0.037333
chr9	18360597	18362220	18361408	ENSG00000227167.1	-	lincRNA	KNOWN	RP11-570H19.2	1	2	0.121536
chr9	18473894	18910950	18692422	ENSG00000178031.15	+	protein_coding	KNOWN	ADAMTSL1	14	29	-0.145771
chr9	18573306	18573379	18573342	ENSG00000264638.1	+	miRNA	KNOWN	MIR3152	1	1	-0.311905
chr9	18651147	18651450	18651298	ENSG00000252960.1	+	misc_RNA	KNOWN	RN7SKP258	1	1	0.048923
chr9	18717974	18718526	18718250	ENSG00000236857.3	-	processed_pseudogene	KNOWN	RAP1BP1	1	1	0.177383
chr9	18927658	19049354	18988506	ENSG00000155875.13	-	protein_coding	KNOWN	SAXO1	4	4	-0.089238
chr9	19026892	19028129	19027510	ENSG00000236680.1	+	processed_pseudogene	KNOWN	RP11-296P7.4	1	1	0.083677
chr9	19049395	19050983	19050189	ENSG00000155876.5	+	protein_coding	KNOWN	RRAGA	1	1	0.083132
chr9	19053143	19103119	19078131	ENSG00000147874.10	-	protein_coding	KNOWN	HAUS6	3	17	0.015338
chr9	19063656	19063786	19063721	ENSG00000251733.1	-	scaRNA	KNOWN	SCARNA8	1	1	0.148575
chr9	19073843	19073946	19073894	ENSG00000252943.1	+	snRNA	KNOWN	RNU6-264P	1	1	-0.257342
chr9	19089593	19089688	19089640	ENSG00000201118.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.257342
chr9	19108375	19149290	19128832	ENSG00000147872.9	-	protein_coding	KNOWN	PLIN2	8	8	0.382710
chr9	19200335	19201046	19200690	ENSG00000232176.1	-	processed_pseudogene	KNOWN	RP11-146N23.1	1	1	0.203885
chr9	19230435	19373545	19301990	ENSG00000137145.20	+	protein_coding	KNOWN	DENND4C	9	33	-0.017598
chr9	19291337	19292576	19291956	ENSG00000232978.2	-	antisense	KNOWN	RP11-146N23.4	1	2	-0.201454
chr9	19371386	19371945	19371665	ENSG00000272842.1	-	antisense	KNOWN	RP11-513M16.7	1	1	-0.135814
chr9	19375451	19375996	19375723	ENSG00000273226.1	+	antisense	KNOWN	RP11-513M16.8	1	1	-0.135814
chr9	19375715	19380254	19377984	ENSG00000137154.12	-	protein_coding	KNOWN	RPS6	5	6	-0.135814
chr9	19383217	19383887	19383552	ENSG00000234853.2	-	processed_pseudogene	KNOWN	NDUFA5P3	1	2	-0.135814
chr9	19409059	19452020	19430539	ENSG00000177076.5	+	protein_coding	KNOWN	ACER2	1	6	0.123358
chr9	19453209	19455173	19454191	ENSG00000260912.1	+	sense_overlapping	KNOWN	RP11-363E7.4	1	1	0.241505
chr9	19460926	19464524	19462725	ENSG00000231909.7	-	transcribed_processed_pseudogene	KNOWN	MAP1LC3BP1	2	4	0.241505
chr9	19507452	19786928	19647190	ENSG00000155886.11	-	protein_coding	KNOWN	SLC24A2	2	10	-0.247142
chr9	19705338	19705655	19705496	ENSG00000232158.1	+	processed_pseudogene	KNOWN	C11orf98P1	1	1	-0.148271
chr9	19829753	19829847	19829800	ENSG00000266224.1	+	miRNA	NOVEL	AL158077.1	1	1	-0.195290
chr9	19895800	19895973	19895886	ENSG00000276667.1	-	unprocessed_pseudogene	KNOWN	RP11-471J7.1	1	1	0.012557
chr9	19926094	19929937	19928015	ENSG00000261402.1	+	lincRNA	KNOWN	RP11-378I6.1	1	1	-0.575864
chr9	19957394	19958147	19957770	ENSG00000270712.1	-	processed_pseudogene	KNOWN	RP11-378I6.2	1	1	-0.284729
chr9	19967239	19967994	19967616	ENSG00000277711.1	-	processed_pseudogene	KNOWN	RP11-378I6.3	1	1	-0.284729
chr9	20285852	20285983	20285917	ENSG00000281142.1	-	miRNA	NOVEL	AL512635.1	1	1	0.184558
chr9	20331446	20332277	20331861	ENSG00000237434.1	+	processed_pseudogene	KNOWN	RP11-15P13.1	1	1	-0.071239
chr9	20341665	20622543	20482104	ENSG00000171843.15	-	protein_coding	KNOWN	MLLT3	10	11	-0.157098
chr9	20411148	20411238	20411193	ENSG00000263790.1	-	miRNA	KNOWN	MIR4473	1	1	-0.179310
chr9	20418321	20418427	20418374	ENSG00000222202.1	+	snRNA	KNOWN	RNU4-26P	1	1	-0.179310
chr9	20502265	20502342	20502303	ENSG00000264941.1	-	miRNA	KNOWN	MIR4474	1	1	-0.464402
chr9	20532552	20533339	20532945	ENSG00000237088.1	+	processed_pseudogene	KNOWN	RP11-73E6.2	1	1	-0.099374
chr9	20576217	20576301	20576259	ENSG00000252324.1	+	miRNA	NOVEL	AL163193.1	1	1	-0.251310
chr9	20658309	20995955	20827132	ENSG00000188352.12	+	protein_coding	KNOWN	FOCAD	17	46	-0.194150
chr9	20683304	20684688	20683996	ENSG00000227071.1	-	lincRNA	KNOWN	FOCAD-AS1	2	2	-0.199471
chr9	20716100	20716209	20716154	ENSG00000207609.2	+	miRNA	KNOWN	MIR491	1	1	-0.171043
chr9	20786927	20787055	20786991	ENSG00000202189.1	+	snoRNA	NOVEL	SNORA30	1	1	-0.006412
chr9	20999515	21031636	21015575	ENSG00000188921.13	-	protein_coding	KNOWN	HACD4	2	7	-0.135959
chr9	21058771	21059323	21059047	ENSG00000230208.1	-	processed_pseudogene	KNOWN	IFNNP1	1	1	-0.492971
chr9	21077105	21077963	21077534	ENSG00000171855.6	-	protein_coding	KNOWN	IFNB1	1	1	-0.209835
chr9	21106543	21106836	21106689	ENSG00000225027.2	+	processed_pseudogene	KNOWN	IFNWP4	1	1	-0.104405
chr9	21135598	21136350	21135974	ENSG00000275980.1	-	processed_pseudogene	KNOWN	RP11-113D19.9	1	2	-0.332264
chr9	21140214	21142145	21141179	ENSG00000177047.6	-	protein_coding	KNOWN	IFNW1	1	1	-0.332264
chr9	21160235	21160336	21160285	ENSG00000199635.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.354073
chr9	21165637	21166660	21166148	ENSG00000137080.4	-	protein_coding	KNOWN	IFNA21	1	1	-0.354073
chr9	21178589	21179188	21178888	ENSG00000232281.2	-	unprocessed_pseudogene	KNOWN	IFNWP15	1	1	-0.582767
chr9	21186694	21228173	21207433	ENSG00000236637.3	-	protein_coding	KNOWN	IFNA4	2	2	-0.206637
chr9	21190654	21191244	21190949	ENSG00000226597.1	-	unprocessed_pseudogene	KNOWN	IFNWP9	1	1	0.034441
chr9	21201469	21202205	21201837	ENSG00000214042.1	-	protein_coding	KNOWN	IFNA7	1	1	0.034441
chr9	21206181	21207143	21206662	ENSG00000186803.3	-	protein_coding	KNOWN	IFNA10	1	1	0.034441
chr9	21209189	21209779	21209484	ENSG00000223684.1	-	unprocessed_pseudogene	KNOWN	IFNWP18	1	1	0.034441
chr9	21216373	21217311	21216842	ENSG00000147885.4	-	protein_coding	KNOWN	IFNA16	1	1	-0.403536
chr9	21227243	21228222	21227732	ENSG00000234829.4	-	protein_coding	KNOWN	IFNA17	1	1	-0.403536
chr9	21231266	21231853	21231559	ENSG00000232138.1	-	unprocessed_pseudogene	KNOWN	IFNWP5	1	1	-0.264152
chr9	21239002	21239991	21239496	ENSG00000228083.2	-	protein_coding	KNOWN	IFNA14	1	1	-0.264152
chr9	21278050	21278619	21278334	ENSG00000224416.2	-	unprocessed_pseudogene	KNOWN	IFNA22P	1	1	-0.614716
chr9	21304326	21305312	21304819	ENSG00000147873.5	-	protein_coding	KNOWN	IFNA5	1	1	-0.380597
chr9	21321300	21321827	21321563	ENSG00000226393.1	+	unprocessed_pseudogene	KNOWN	IFNA20P	1	1	-0.115813
chr9	21329671	21335380	21332525	ENSG00000198642.6	-	protein_coding	KNOWN	KLHL9	1	1	-0.096794
chr9	21349835	21351378	21350606	ENSG00000120235.4	-	protein_coding	KNOWN	IFNA6	2	1	-0.358856
chr9	21367424	21368962	21368193	ENSG00000233816.3	-	protein_coding	KNOWN	IFNA13	2	1	-0.390160
chr9	21384254	21385388	21384821	ENSG00000188379.6	-	protein_coding	KNOWN	IFNA2	1	1	-0.152812
chr9	21394888	21396346	21395617	ENSG00000261696.1	-	lincRNA	KNOWN	RP11-354P17.15	1	1	-0.311364
chr9	21398614	21399139	21398876	ENSG00000231195.1	-	unprocessed_pseudogene	KNOWN	IFNA11P	1	1	-0.311364
chr9	21403081	21403651	21403366	ENSG00000235108.1	+	unprocessed_pseudogene	KNOWN	IFNA12P	1	1	-0.311364
chr9	21409147	21410185	21409666	ENSG00000120242.3	+	protein_coding	KNOWN	IFNA8	1	1	-0.294078
chr9	21409169	21441316	21425242	ENSG00000197919.4	+	protein_coding	KNOWN	IFNA1	2	2	-0.269768
chr9	21420234	21420813	21420523	ENSG00000237691.1	+	unprocessed_pseudogene	KNOWN	IFNWP2	1	1	-0.214897
chr9	21455484	21456049	21455766	ENSG00000238271.2	+	unprocessed_pseudogene	KNOWN	IFNWP19	1	1	-0.076984
chr9	21455642	21559669	21507655	ENSG00000171889.3	-	sense_overlapping	KNOWN	MIR31HG	1	4	-0.035482
chr9	21480839	21482313	21481576	ENSG00000184995.7	-	protein_coding	KNOWN	IFNE	1	1	-0.028690
chr9	21512115	21512185	21512150	ENSG00000199177.1	-	miRNA	KNOWN	MIR31	1	1	0.011072
chr9	21524307	21524382	21524344	ENSG00000264379.1	-	snoRNA	NOVEL	SNORD39	1	1	0.011072
chr9	21638285	21638676	21638480	ENSG00000227443.2	+	processed_pseudogene	KNOWN	RP11-344A7.1	1	1	0.057844
chr9	21695176	21696943	21696059	ENSG00000229835.2	+	processed_pseudogene	KNOWN	KHSRPP1	1	1	0.285673
chr9	21699314	21699596	21699455	ENSG00000244230.3	+	misc_RNA	KNOWN	RN7SL151P	1	1	0.285673
chr9	21802543	21937651	21870097	ENSG00000099810.18	+	protein_coding	KNOWN	MTAP	13	8	0.077485
chr9	21802636	22032986	21917811	ENSG00000264545.1	+	protein_coding	KNOWN	RP11-145E5.5	1	6	0.077583
chr9	21811621	21812347	21811984	ENSG00000229298.1	-	processed_pseudogene	KNOWN	TUBB8P1	1	1	0.336614
chr9	21858910	21861926	21860418	ENSG00000265194.1	-	antisense	KNOWN	RP11-70L8.4	1	1	0.180801
chr9	21892188	21893857	21893022	ENSG00000279670.1	+	TEC	KNOWN	RP11-70L8.5	1	1	-0.200985
chr9	21929457	21931073	21930265	ENSG00000264801.1	+	transcribed_processed_pseudogene	KNOWN	ERVFRD-3	1	1	0.106377
chr9	21966929	21967751	21967340	ENSG00000224854.3	+	lincRNA	KNOWN	CDKN2A-AS1	1	1	-0.261240
chr9	21967753	21995301	21981527	ENSG00000147889.16	-	protein_coding	KNOWN	CDKN2A	15	4	0.242474
chr9	21994778	22121097	22057937	ENSG00000240498.6	+	antisense	KNOWN	CDKN2B-AS1	17	19	0.084004
chr9	21995482	21996013	21995747	ENSG00000266446.1	+	sense_intronic	KNOWN	RP11-149I2.4	1	2	0.013989
chr9	22002903	22009363	22006133	ENSG00000147883.10	-	protein_coding	KNOWN	CDKN2B	3	2	0.013989
chr9	22012155	22012536	22012345	ENSG00000215221.2	+	processed_pseudogene	KNOWN	UBA52P6	1	1	0.151581
chr9	22046758	22046901	22046829	ENSG00000274055.1	+	misc_RNA	NOVEL	CDKN2B-AS_3	1	1	0.201114
chr9	22117665	22117814	22117739	ENSG00000277653.1	+	misc_RNA	NOVEL	CDKN2B-AS	1	1	0.205649
chr9	22203990	22214672	22209331	ENSG00000236921.1	-	lincRNA	KNOWN	RP11-408N14.1	1	4	0.011708
chr9	22446841	22455740	22451290	ENSG00000176399.3	+	protein_coding	KNOWN	DMRTA1	1	2	-0.347038
chr9	22646200	22824213	22735206	ENSG00000234840.1	+	lincRNA	KNOWN	LINC01239	2	6	-0.555934
chr9	22747700	22748234	22747967	ENSG00000236739.3	+	processed_pseudogene	KNOWN	CLIC4P1	1	1	-0.502369
chr9	22767175	22768316	22767745	ENSG00000224549.1	+	lincRNA	KNOWN	RP11-370B11.3	1	2	-0.754203
chr9	23632106	23632360	23632233	ENSG00000227607.2	+	processed_pseudogene	KNOWN	SUMO2P2	1	1	-0.391758
chr9	23671788	23672399	23672093	ENSG00000233906.1	-	lincRNA	KNOWN	RP11-315I14.2	1	2	-0.245449
chr9	23681894	23682662	23682278	ENSG00000226626.2	+	processed_pseudogene	KNOWN	NOP56P2	1	1	-0.245449
chr9	23690104	23826337	23758220	ENSG00000107105.14	-	protein_coding	KNOWN	ELAVL2	8	8	-0.437364
chr9	23829670	23849914	23839792	ENSG00000231460.2	+	lincRNA	KNOWN	RP11-321L2.1	1	5	-0.461207
chr9	23894990	23898054	23896522	ENSG00000237414.2	-	lincRNA	KNOWN	RP11-321L2.2	1	2	-0.518966
chr9	23955760	23956444	23956102	ENSG00000277608.1	+	unprocessed_pseudogene	KNOWN	RP11-321L2.3	1	1	-0.488783
chr9	24542952	24545946	24544449	ENSG00000205442.12	-	protein_coding	KNOWN	IZUMO3	3	7	-0.459250
chr9	24545952	24591993	24568972	ENSG00000269957.5	+	lincRNA	KNOWN	RP11-20A20.2	2	5	-0.303777
chr9	24872712	24872798	24872755	ENSG00000216088.1	-	miRNA	NOVEL	AL157830.1	1	1	-0.689663
chr9	24905469	24905735	24905602	ENSG00000223088.1	+	ribozyme	KNOWN	RMRPP5	1	1	-0.122859
chr9	25088811	25089151	25088981	ENSG00000222693.1	-	misc_RNA	KNOWN	RN7SKP120	1	1	-0.346697
chr9	25676389	25678440	25677414	ENSG00000198680.4	-	protein_coding	KNOWN	TUSC1	1	1	-0.239717
chr9	25780056	25812968	25796512	ENSG00000236306.2	+	lincRNA	KNOWN	LINC01241	2	6	-0.464838
chr9	25937912	25938434	25938173	ENSG00000270683.1	+	processed_pseudogene	KNOWN	FAM71BP1	1	1	-0.004870
chr9	26066675	26118408	26092541	ENSG00000276759.2	+	lincRNA	KNOWN	RP11-80I3.1	1	7	-0.323626
chr9	26178394	26178489	26178441	ENSG00000277875.1	+	miRNA	NOVEL	AL356791.1	1	1	-0.178097
chr9	26614040	26614125	26614082	ENSG00000266429.1	-	miRNA	NOVEL	AL442639.1	1	1	-0.151737
chr9	26642697	26644595	26643646	ENSG00000279256.1	-	TEC	KNOWN	RP11-5P15.1	1	1	-0.109215
chr9	26746953	26786874	26766913	ENSG00000254261.1	+	lincRNA	KNOWN	RP11-18A15.1	1	4	-0.185327
chr9	26796173	26796304	26796238	ENSG00000252580.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.414544
chr9	26801733	26805862	26803797	ENSG00000253400.1	+	lincRNA	KNOWN	RP11-337A23.6	1	2	-0.414544
chr9	26840685	26892804	26866744	ENSG00000120159.11	-	protein_coding	KNOWN	CAAP1	6	6	-0.168041
chr9	26880178	26880549	26880363	ENSG00000232466.1	-	processed_pseudogene	KNOWN	RP11-337A23.5	1	1	-0.390401
chr9	26895678	26895970	26895824	ENSG00000240306.2	+	misc_RNA	KNOWN	RN7SL100P	1	1	0.020831
chr9	26904083	26947463	26925773	ENSG00000137055.14	-	protein_coding	KNOWN	PLAA	7	14	0.056192
chr9	26947039	27062930	27004984	ENSG00000096872.15	+	protein_coding	KNOWN	IFT74	10	20	-0.013718
chr9	26955780	26956295	26956037	ENSG00000234676.1	-	antisense	KNOWN	IFT74-AS1	1	2	0.142032
chr9	26993136	27005693	26999414	ENSG00000184434.7	-	protein_coding	KNOWN	LRRC19	2	5	-0.108827
chr9	27102630	27104728	27103679	ENSG00000254396.1	+	lincRNA	KNOWN	RP11-56F10.3	1	2	0.274470
chr9	27109141	27230175	27169658	ENSG00000120156.20	+	protein_coding	KNOWN	TEK	5	23	0.021880
chr9	27198287	27198401	27198344	ENSG00000223162.1	+	rRNA	KNOWN	RNA5SP280	1	1	0.175408
chr9	27210327	27210626	27210476	ENSG00000232867.1	+	processed_pseudogene	KNOWN	RP11-179D22.1	1	1	-0.338937
chr9	27245684	27282793	27264238	ENSG00000231459.1	-	lincRNA	KNOWN	LINC00032	1	17	-0.110021
chr9	27284659	27297139	27290899	ENSG00000120160.10	-	protein_coding	KNOWN	EQTN	4	8	-0.137255
chr9	27325209	27529781	27427495	ENSG00000120162.9	-	protein_coding	KNOWN	MOB3B	2	4	-0.187846
chr9	27391734	27397563	27394648	ENSG00000237734.1	+	antisense	KNOWN	RP11-298E2.2	1	4	-0.199239
chr9	27524314	27526498	27525406	ENSG00000147896.3	+	protein_coding	KNOWN	IFNK	1	2	-0.448577
chr9	27546545	27573866	27560205	ENSG00000147894.14	-	protein_coding	KNOWN	C9orf72	6	11	-0.098532
chr9	27608382	27610745	27609563	ENSG00000215441.3	-	processed_pseudogene	KNOWN	CTAGE12P	1	1	-0.334559
chr9	27829276	27844481	27836878	ENSG00000260390.1	+	lincRNA	KNOWN	RP11-575I8.1	1	2	-0.204616
chr9	27937617	27944497	27941057	ENSG00000260412.1	-	sense_overlapping	KNOWN	RP11-438B23.2	1	1	-0.536039
chr9	27948078	28670286	28309182	ENSG00000174482.10	-	protein_coding	KNOWN	LINGO2	4	6	-0.478301
chr9	28148211	28149236	28148723	ENSG00000229060.4	+	processed_pseudogene	KNOWN	RP11-20P5.2	1	1	-0.428399
chr9	28598668	28599292	28598980	ENSG00000224955.1	-	processed_pseudogene	KNOWN	KCTD10P1	1	1	-0.300923
chr9	28863626	28863706	28863666	ENSG00000215966.1	-	miRNA	KNOWN	MIR876	1	1	-0.654560
chr9	28888856	28888965	28888910	ENSG00000215939.2	-	miRNA	KNOWN	MIR873	1	1	-0.177469
chr9	29254075	29254426	29254250	ENSG00000230276.2	-	processed_pseudogene	KNOWN	RP11-373A6.1	1	1	-0.473605
chr9	29317833	29318952	29318392	ENSG00000277646.1	+	processed_pseudogene	KNOWN	RP11-275A14.1	1	1	-0.497297
chr9	29636486	29636853	29636669	ENSG00000229834.1	+	processed_pseudogene	KNOWN	RP11-48L13.1	1	1	-0.257342
chr9	29824742	29826711	29825726	ENSG00000230097.2	-	processed_pseudogene	KNOWN	ME2P1	1	1	-0.189294
chr9	30388935	30575012	30481973	ENSG00000280683.1	-	lincRNA	KNOWN	LINC01242	1	4	-0.646445
chr9	30558880	30559481	30559180	ENSG00000232060.3	-	processed_pseudogene	KNOWN	SLC4A1APP1	1	1	-0.457924
chr9	30670964	30671966	30671465	ENSG00000239792.2	-	unprocessed_pseudogene	KNOWN	C2orf27AP2	1	4	-0.761460
chr9	30689105	30690272	30689688	ENSG00000215210.3	+	processed_pseudogene	KNOWN	RBMXP2	1	1	-0.684288
chr9	30771097	30771199	30771148	ENSG00000221111.1	-	miRNA	NOVEL	AL590726.2	1	1	-0.674418
chr9	30773464	30774732	30774098	ENSG00000235626.2	+	processed_pseudogene	KNOWN	KRT18P66	1	1	-0.674418
chr9	30774228	30774319	30774273	ENSG00000211510.2	+	miRNA	NOVEL	AL590726.1	1	1	-0.674418
chr9	30799471	30800746	30800108	ENSG00000226246.1	-	processed_pseudogene	KNOWN	KRT18P36	1	1	-0.607429
chr9	30831878	30832225	30832051	ENSG00000233278.1	-	processed_pseudogene	KNOWN	RPS26P2	1	1	-0.372849
chr9	30935485	30935977	30935731	ENSG00000214020.3	+	processed_pseudogene	KNOWN	FTLP4	1	1	-0.941956
chr9	30988085	30990572	30989328	ENSG00000228557.1	+	processed_pseudogene	KNOWN	HSPA8P17	1	2	-0.238186
chr9	31165618	31166980	31166299	ENSG00000223421.1	-	processed_pseudogene	KNOWN	RP11-572H4.1	1	1	-0.272283
chr9	31253901	31254777	31254339	ENSG00000232203.3	+	processed_pseudogene	KNOWN	SLC25A6P2	1	1	-0.537026
chr9	31326759	31326826	31326792	ENSG00000274793.1	-	miRNA	NOVEL	AL353783.1	1	1	-0.207568
chr9	31371611	31381490	31376550	ENSG00000260720.1	-	lincRNA	KNOWN	LINC01243	1	2	-0.433328
chr9	31505280	31505943	31505611	ENSG00000226998.1	+	unprocessed_pseudogene	KNOWN	RP11-291J9.1	1	1	-0.550852
chr9	31505946	31506615	31506280	ENSG00000229080.1	+	unprocessed_pseudogene	KNOWN	RP11-291J9.2	1	1	-0.550852
chr9	31644576	31645160	31644868	ENSG00000235148.2	-	processed_pseudogene	KNOWN	HMGB3P23	1	1	-0.700203
chr9	32293558	32293692	32293625	ENSG00000252313.1	+	rRNA	KNOWN	RNA5SP281	1	1	-0.488201
chr9	32333457	32334354	32333905	ENSG00000225347.1	-	processed_pseudogene	KNOWN	SLC25A5P8	1	1	-0.167976
chr9	32384603	32454769	32419686	ENSG00000122729.18	+	protein_coding	KNOWN	ACO1	3	22	0.168182
chr9	32455705	32526324	32491014	ENSG00000107201.9	-	protein_coding	KNOWN	DDX58	2	18	0.181642
chr9	32540544	32552553	32546548	ENSG00000197579.7	-	protein_coding	KNOWN	TOPORS	2	3	0.123051
chr9	32551144	32567005	32559074	ENSG00000235453.7	+	antisense	KNOWN	TOPORS-AS1	4	3	0.146735
chr9	32552999	32573184	32563091	ENSG00000165264.10	-	protein_coding	KNOWN	NDUFB6	3	4	0.171147
chr9	32566148	32567126	32566637	ENSG00000232303.2	-	processed_pseudogene	KNOWN	DFFBP1	1	1	0.146735
chr9	32566789	32568621	32567705	ENSG00000241043.1	+	protein_coding	KNOWN	GVQW1	1	1	0.146735
chr9	32629454	32635669	32632561	ENSG00000122728.6	-	protein_coding	KNOWN	TAF1L	1	1	-0.087504
chr9	32633454	32648685	32641069	ENSG00000223440.1	+	antisense	KNOWN	RP11-555J4.4	1	2	-0.092040
chr9	32643103	32645026	32644064	ENSG00000230516.1	-	lincRNA	KNOWN	RP11-555J4.3	1	2	-0.092040
chr9	32676063	32676520	32676291	ENSG00000238001.2	-	processed_pseudogene	KNOWN	SNRPCP1	1	1	-0.431980
chr9	32727069	32727522	32727295	ENSG00000230867.1	-	processed_pseudogene	KNOWN	RP11-462B18.1	1	1	-0.094421
chr9	32764296	32764422	32764359	ENSG00000221696.1	+	miRNA	NOVEL	AL157884.1	1	1	-0.189779
chr9	32783499	32787399	32785449	ENSG00000188133.5	+	protein_coding	KNOWN	TMEM215	1	2	-0.367440
chr9	32820261	32820350	32820305	ENSG00000272113.2	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.149016
chr9	32836575	32869595	32853085	ENSG00000236796.1	-	unprocessed_pseudogene	KNOWN	RP11-462B18.3	1	12	0.038429
chr9	32840598	32841762	32841180	ENSG00000231193.1	-	lincRNA	KNOWN	RP11-462B18.2	1	2	0.077270
chr9	32926051	32926450	32926250	ENSG00000223807.1	+	processed_pseudogene	KNOWN	BOLA3P4	1	1	-0.242427
chr9	32945996	32947222	32946609	ENSG00000237437.1	+	processed_pseudogene	KNOWN	ASS1P12	1	1	-0.024822
chr9	32972606	33025168	32998887	ENSG00000137074.18	-	protein_coding	KNOWN	APTX	33	8	0.301027
chr9	32979560	32980403	32979981	ENSG00000236184.1	-	processed_pseudogene	KNOWN	TCEA1P4	1	1	0.155417
chr9	33019682	33020165	33019923	ENSG00000225693.1	-	processed_pseudogene	KNOWN	LAGE3P1	1	1	0.493609
chr9	33025211	33039907	33032559	ENSG00000086061.15	+	protein_coding	KNOWN	DNAJA1	3	9	0.478932
chr9	33041764	33076659	33059211	ENSG00000122692.8	-	protein_coding	KNOWN	SMU1	1	12	0.276249
chr9	33042109	33042216	33042162	ENSG00000222169.1	-	miRNA	NOVEL	AL162590.1	1	1	0.471840
chr9	33104082	33167356	33135719	ENSG00000086062.12	-	protein_coding	KNOWN	B4GALT1	2	6	0.642641
chr9	33166975	33179983	33173479	ENSG00000233554.5	+	antisense	KNOWN	B4GALT1-AS1	2	4	0.685077
chr9	33174170	33174295	33174232	ENSG00000252224.1	+	snRNA	KNOWN	RNU4ATAC15P	1	1	0.714354
chr9	33218365	33248567	33233466	ENSG00000122711.8	+	protein_coding	KNOWN	SPINK4	2	5	0.500901
chr9	33247820	33264761	33256290	ENSG00000107262.17	-	protein_coding	KNOWN	BAG1	12	8	0.523663
chr9	33264879	33282069	33273474	ENSG00000086065.13	+	protein_coding	KNOWN	CHMP5	3	8	0.317983
chr9	33290511	33371157	33330834	ENSG00000086102.18	+	protein_coding	KNOWN	NFX1	6	24	0.531007
chr9	33352788	33352874	33352831	ENSG00000200544.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.339513
chr9	33383179	33402682	33392930	ENSG00000165269.12	-	protein_coding	KNOWN	AQP7	19	8	0.484011
chr9	33402857	33409948	33406402	ENSG00000223678.1	+	antisense	KNOWN	RP11-311H10.4	1	3	0.542469
chr9	33441154	33447611	33444382	ENSG00000165272.14	-	protein_coding	KNOWN	AQP3	5	6	0.687843
chr9	33449755	33449941	33449848	ENSG00000270542.1	+	processed_pseudogene	KNOWN	RP11-311H10.7	1	1	0.687843
chr9	33461441	33473930	33467685	ENSG00000165271.16	-	protein_coding	KNOWN	NOL6	6	26	0.926839
chr9	33467869	33467935	33467902	ENSG00000275651.1	-	miRNA	KNOWN	MIR6851	1	1	0.943991
chr9	33503655	33510711	33507183	ENSG00000226823.1	-	unprocessed_pseudogene	KNOWN	SUGT1P	1	5	0.365493
chr9	33512959	33514773	33513866	ENSG00000228072.1	-	antisense	KNOWN	RP11-255A11.2	1	3	0.302352
chr9	33524394	33573009	33548701	ENSG00000230453.9	+	protein_coding	KNOWN	ANKRD18B	8	16	0.092700
chr9	33574361	33574588	33574474	ENSG00000225123.2	-	processed_pseudogene	KNOWN	RP11-255A11.4	1	1	0.189133
chr9	33576380	33577014	33576697	ENSG00000234373.1	+	processed_pseudogene	KNOWN	SNX18P7	1	1	0.189133
chr9	33580695	33605293	33592994	ENSG00000226562.3	+	lincRNA	KNOWN	CYP4F26P	3	5	0.435904
chr9	33613848	33614009	33613928	ENSG00000204982.3	-	unprocessed_pseudogene	KNOWN	PRSS3P4	1	1	0.485003
chr9	33617762	33618506	33618134	ENSG00000205274.3	+	TR_V_gene	KNOWN	TRBV20OR9-2	1	2	0.485003
chr9	33624274	33625293	33624783	ENSG00000231991.4	+	processed_pseudogene	KNOWN	ANXA2P2	1	1	0.485003
chr9	33629121	33629586	33629353	ENSG00000183938.5	+	TR_V_gene	KNOWN	TRBV21OR9-2	1	2	0.485003
chr9	33634111	33634246	33634178	ENSG00000234122.1	+	TR_V_pseudogene	KNOWN	TRBV22OR9-2	1	1	0.076964
chr9	33638035	33638494	33638264	ENSG00000229063.2	+	TR_V_gene	KNOWN	TRBV23OR9-2	1	2	0.076964
chr9	33649047	33649614	33649330	ENSG00000215206.5	+	TR_V_pseudogene	KNOWN	TRBV24OR9-2	1	2	0.076964
chr9	33662166	33662663	33662414	ENSG00000240215.4	+	unprocessed_pseudogene	KNOWN	TRBV25OR9-2	1	2	0.209031
chr9	33673504	33677499	33675501	ENSG00000237984.3	-	transcribed_processed_pseudogene	KNOWN	PTENP1	2	1	0.195370
chr9	33677268	33688011	33682639	ENSG00000281128.1	+	antisense	KNOWN	PTENP1-AS	1	4	0.195370
chr9	33695767	33696059	33695913	ENSG00000231165.3	+	TR_V_pseudogene	KNOWN	TRBV26OR9-2	1	1	0.173063
chr9	33697459	33700986	33699222	ENSG00000260947.1	+	lincRNA	KNOWN	RP11-384P7.7	1	1	0.173063
chr9	33719690	33722555	33721122	ENSG00000227301.1	+	lincRNA	KNOWN	RP11-384P7.5	1	2	-0.126009
chr9	33732975	33738416	33735695	ENSG00000233776.5	-	antisense	KNOWN	LINC01251	2	2	0.588823
chr9	33750466	33799231	33774848	ENSG00000010438.16	+	protein_coding	KNOWN	PRSS3	8	6	0.380641
chr9	33785950	33818795	33802372	ENSG00000235481.2	-	antisense	KNOWN	UBE2R2-AS1	1	4	0.483583
chr9	33786221	33786828	33786524	ENSG00000223394.2	+	TR_V_pseudogene	KNOWN	TRBV29OR9-2	1	2	0.624005
chr9	33817567	33920404	33868985	ENSG00000107341.4	+	protein_coding	KNOWN	UBE2R2	1	5	0.450163
chr9	33830978	33831078	33831028	ENSG00000200834.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.658193
chr9	33868540	33868665	33868602	ENSG00000251748.1	+	snRNA	KNOWN	RNU4ATAC11P	1	1	0.196961
chr9	33921693	34048949	33985321	ENSG00000137073.20	-	protein_coding	KNOWN	UBAP2	13	29	0.426617
chr9	33934296	33934376	33934336	ENSG00000238300.1	-	snoRNA	KNOWN	SNORD121B	1	1	0.679638
chr9	33952769	33952850	33952809	ENSG00000238886.1	-	snoRNA	KNOWN	SNORD121A	1	1	0.157580
chr9	33968071	33968518	33968294	ENSG00000226801.2	-	processed_pseudogene	KNOWN	OSTCP8	1	1	0.157580
chr9	34049966	34050244	34050105	ENSG00000222259.1	+	misc_RNA	KNOWN	RN7SKP114	1	1	0.649627
chr9	34084332	34096225	34090278	ENSG00000228352.2	+	antisense	KNOWN	RP11-537H15.3	1	3	0.425936
chr9	34086387	34127399	34106893	ENSG00000198876.12	-	protein_coding	KNOWN	DCAF12	5	9	0.523923
chr9	34109171	34109968	34109569	ENSG00000224802.2	-	processed_pseudogene	KNOWN	TUBB4BP2	1	1	0.507029
chr9	34133157	34134696	34133926	ENSG00000239392.2	-	processed_pseudogene	KNOWN	RP11-537H15.4	1	1	0.455428
chr9	34179005	34252523	34215764	ENSG00000165006.13	+	protein_coding	KNOWN	UBAP1	5	7	0.517991
chr9	34191555	34191881	34191718	ENSG00000227383.1	+	processed_pseudogene	KNOWN	RP11-571F15.2	1	1	0.516132
chr9	34201273	34201515	34201394	ENSG00000279336.1	-	pseudogene	NOVEL	AL353662.2	1	3	0.516132
chr9	34206134	34206241	34206187	ENSG00000252164.1	-	rRNA	KNOWN	RNA5SP282	1	1	0.516132
chr9	34223984	34224628	34224306	ENSG00000233668.1	-	processed_pseudogene	KNOWN	RP11-571F15.3	1	1	0.450252
chr9	34252381	34329200	34290790	ENSG00000186638.15	-	protein_coding	KNOWN	KIF24	3	13	0.436553
chr9	34282528	34282670	34282599	ENSG00000222426.1	-	snRNA	KNOWN	RNU2-50P	1	1	0.410263
chr9	34296379	34296430	34296404	ENSG00000266881.1	+	miRNA	NOVEL	AL353662.1	1	1	0.121893
chr9	34318407	34319655	34319031	ENSG00000229207.1	+	processed_pseudogene	KNOWN	SERPINH1P1	1	1	0.544897
chr9	34329506	34343713	34336609	ENSG00000164978.17	+	protein_coding	KNOWN	NUDT2	4	5	0.541204
chr9	34366670	34376853	34371761	ENSG00000164976.8	-	protein_coding	KNOWN	KIAA1161	2	2	0.649765
chr9	34379019	34397832	34388425	ENSG00000164972.12	-	protein_coding	KNOWN	C9orf24	7	7	0.612557
chr9	34389943	34390051	34389997	ENSG00000207032.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.601242
chr9	34398184	34458570	34428377	ENSG00000164970.14	-	protein_coding	KNOWN	FAM219A	9	7	0.468447
chr9	34457414	34520989	34489201	ENSG00000122735.15	+	protein_coding	KNOWN	DNAI1	9	20	0.580785
chr9	34478622	34478905	34478763	ENSG00000251697.1	+	misc_RNA	KNOWN	RN7SKP24	1	1	0.461748
chr9	34521040	34523041	34522040	ENSG00000168913.6	-	protein_coding	KNOWN	ENHO	1	2	0.884631
chr9	34521527	34524241	34522884	ENSG00000230729.1	+	antisense	KNOWN	RP11-296L22.8	1	3	0.884631
chr9	34546524	34546996	34546760	ENSG00000232983.2	-	processed_pseudogene	KNOWN	RP11-296L22.7	1	1	0.417233
chr9	34551432	34590140	34570786	ENSG00000122756.14	-	protein_coding	KNOWN	CNTFR	4	10	0.846779
chr9	34568015	34582829	34575422	ENSG00000237159.5	+	antisense	KNOWN	CNTFR-AS1	4	5	0.854925
chr9	34610486	34612104	34611295	ENSG00000164967.9	-	protein_coding	KNOWN	RPP25L	2	2	1.034111
chr9	34613545	34620523	34617034	ENSG00000137100.15	-	protein_coding	KNOWN	DCTN3	11	7	1.034111
chr9	34621379	34628107	34624743	ENSG00000205143.2	-	protein_coding	KNOWN	ARID3C	1	7	1.034111
chr9	34634722	34637809	34636265	ENSG00000147955.16	-	protein_coding	KNOWN	SIGMAR1	7	4	1.033496
chr9	34638133	34651035	34644584	ENSG00000213930.11	+	protein_coding	KNOWN	GALT	29	11	1.031280
chr9	34646645	34657113	34651879	ENSG00000258728.1	+	protein_coding	KNOWN	RP11-195F19.29	1	8	1.014744
chr9	34650702	34661892	34656297	ENSG00000137070.17	+	protein_coding	KNOWN	IL11RA	15	13	1.005903
chr9	34661880	34664048	34662964	ENSG00000213927.3	-	protein_coding	KNOWN	CCL27	2	3	1.005903
chr9	34661903	34666029	34663966	ENSG00000261215.1	-	processed_transcript	KNOWN	RP11-195F19.30	1	5	1.005903
chr9	34664163	34666112	34665137	ENSG00000187186.14	-	protein_coding	KNOWN	RP11-195F19.5	5	4	1.005903
chr9	34665665	34681298	34673481	ENSG00000230074.1	+	antisense	KNOWN	RP11-195F19.9	1	3	0.747938
chr9	34689567	34691277	34690422	ENSG00000172724.11	-	protein_coding	KNOWN	CCL19	3	4	0.691514
chr9	34709005	34710124	34709564	ENSG00000137077.7	-	protein_coding	KNOWN	CCL21	2	4	0.682134
chr9	34723055	34729467	34726261	ENSG00000205108.5	-	protein_coding	KNOWN	FAM205A	1	4	0.493242
chr9	34832295	34838586	34835440	ENSG00000257198.6	-	transcribed_unprocessed_pseudogene	KNOWN	FAM205BP	3	4	0.297461
chr9	34889064	34895778	34892421	ENSG00000187791.12	-	protein_coding	KNOWN	FAM205C	3	5	0.318063
chr9	34917175	34918296	34917735	ENSG00000178723.7	+	processed_pseudogene	KNOWN	GLULP4	1	1	0.224299
chr9	34922184	34922921	34922552	ENSG00000215199.3	-	processed_pseudogene	KNOWN	YWHAZP6	1	1	0.224299
chr9	34957608	34982544	34970076	ENSG00000122733.12	+	protein_coding	KNOWN	PHF24	4	8	0.395569
chr9	34985410	34989379	34987394	ENSG00000281491.1	-	lincRNA	KNOWN	DNAJB5-AS1	1	2	0.423934
chr9	34989641	34998900	34994270	ENSG00000137094.14	+	protein_coding	KNOWN	DNAJB5	10	5	0.715501
chr9	35001342	35002994	35002168	ENSG00000273597.1	-	processed_pseudogene	KNOWN	RP11-392A14.9	1	1	0.727228
chr9	35001913	35003663	35002788	ENSG00000279489.1	+	TEC	KNOWN	RP11-392A14.8	1	1	0.727228
chr9	35010703	35011285	35010994	ENSG00000233148.2	+	processed_pseudogene	KNOWN	SYF2P2	1	1	0.764902
chr9	35038625	35044326	35041475	ENSG00000279608.1	-	TEC	KNOWN	RP11-182N22.9	1	1	0.617366
chr9	35041095	35045991	35043543	ENSG00000174038.12	+	protein_coding	KNOWN	C9orf131	7	3	0.617366
chr9	35049271	35049563	35049417	ENSG00000241568.3	+	misc_RNA	KNOWN	RN7SL338P	1	1	0.617366
chr9	35056064	35073249	35064656	ENSG00000165280.15	-	protein_coding	KNOWN	VCP	7	17	0.796383
chr9	35073835	35080016	35076925	ENSG00000221829.9	-	protein_coding	KNOWN	FANCG	8	14	0.954885
chr9	35088688	35096601	35092644	ENSG00000165282.13	-	protein_coding	KNOWN	PIGO	8	13	0.865009
chr9	35096378	35098141	35097259	ENSG00000234181.1	+	antisense	KNOWN	RP11-182N22.8	1	2	0.847162
chr9	35099776	35103195	35101485	ENSG00000165283.15	-	protein_coding	KNOWN	STOML2	5	10	0.847162
chr9	35104112	35116341	35110226	ENSG00000005238.19	-	protein_coding	KNOWN	FAM214B	9	10	1.178708
chr9	35147410	35149184	35148297	ENSG00000215198.3	-	processed_pseudogene	KNOWN	RP11-182N22.7	1	1	0.410521
chr9	35161992	35405338	35283665	ENSG00000198722.13	+	protein_coding	KNOWN	UNC13B	9	42	0.479756
chr9	35360540	35362054	35361297	ENSG00000279083.1	-	TEC	KNOWN	RP11-395N21.2	1	1	0.555939
chr9	35406755	35483035	35444895	ENSG00000179766.17	+	transcribed_unprocessed_pseudogene	KNOWN	ATP8B5P	4	18	0.208156
chr9	35449748	35450352	35450050	ENSG00000244213.1	+	processed_pseudogene	KNOWN	ZFAND6P1	1	1	0.096261
chr9	35490127	35561898	35526012	ENSG00000198853.11	+	protein_coding	KNOWN	RUSC2	3	12	0.868771
chr9	35507564	35507873	35507718	ENSG00000235619.1	+	processed_pseudogene	KNOWN	RPL36AP33	1	1	0.886568
chr9	35561831	35563899	35562865	ENSG00000215187.9	-	protein_coding	KNOWN	FAM166B	6	7	1.020042
chr9	35592786	35592951	35592868	ENSG00000227852.1	+	processed_pseudogene	KNOWN	RP11-156G14.6	1	1	0.731197
chr9	35605305	35610041	35607673	ENSG00000107140.15	+	protein_coding	KNOWN	TESK1	6	11	0.735764
chr9	35608077	35608188	35608132	ENSG00000263892.2	+	miRNA	NOVEL	AL357874.1	1	1	0.731197
chr9	35609533	35646810	35628171	ENSG00000137101.12	-	protein_coding	KNOWN	CD72	11	10	0.828670
chr9	35642514	35643517	35643015	ENSG00000231393.1	+	antisense	KNOWN	RP11-331F9.3	1	2	0.334647
chr9	35646270	35647099	35646684	ENSG00000227933.1	+	antisense	KNOWN	RP11-331F9.4	1	2	0.334647
chr9	35649295	35650950	35650122	ENSG00000137078.8	-	protein_coding	KNOWN	SIT1	4	5	0.842672
chr9	35657751	35658018	35657884	ENSG00000269900.3	-	lincRNA	KNOWN	RMRP	1	1	1.218749
chr9	35657754	35658017	35657885	ENSG00000277027.1	-	ribozyme	KNOWN	RMRP	1	1	1.218749
chr9	35658290	35661511	35659900	ENSG00000159884.11	+	protein_coding	KNOWN	CCDC107	6	6	1.218749
chr9	35658875	35675866	35667370	ENSG00000137135.17	-	protein_coding	KNOWN	ARHGEF39	6	12	1.241682
chr9	35671776	35672044	35671910	ENSG00000243136.3	+	misc_RNA	KNOWN	RN7SL22P	1	1	1.285164
chr9	35673856	35681159	35677507	ENSG00000107159.12	+	protein_coding	KNOWN	CA9	4	11	1.285164
chr9	35681992	35691020	35686506	ENSG00000198467.13	-	protein_coding	KNOWN	TPM2	8	9	1.312573
chr9	35696948	35732395	35714671	ENSG00000137076.18	-	protein_coding	KNOWN	TLN1	8	57	1.454272
chr9	35710676	35710741	35710708	ENSG00000275831.1	-	miRNA	KNOWN	MIR6852	1	1	1.402961
chr9	35732320	35737007	35734663	ENSG00000107175.10	+	protein_coding	KNOWN	CREB3	3	9	1.483570
chr9	35732922	35732995	35732958	ENSG00000273945.1	+	miRNA	KNOWN	MIR6853	1	1	1.483570
chr9	35736866	35749228	35743047	ENSG00000070610.14	-	protein_coding	KNOWN	GBA2	8	17	1.483570
chr9	35749287	35758575	35753931	ENSG00000107185.9	+	protein_coding	KNOWN	RGP1	2	9	1.292930
chr9	35752990	35756613	35754801	ENSG00000215183.4	-	protein_coding	KNOWN	MSMP	2	3	1.277103
chr9	35756712	35757940	35757326	ENSG00000228843.2	-	antisense	KNOWN	RP11-112J3.15	1	2	1.277103
chr9	35772163	35790432	35781297	ENSG00000227388.2	+	lincRNA	KNOWN	RP11-112J3.16	2	3	0.964648
chr9	35792154	35809732	35800943	ENSG00000159899.14	+	protein_coding	KNOWN	NPR2	6	22	1.125350
chr9	35808045	35812272	35810158	ENSG00000137098.13	-	protein_coding	KNOWN	SPAG8	12	8	1.206225
chr9	35811476	35811550	35811513	ENSG00000263448.1	-	miRNA	NOVEL	AL133410.1	1	1	1.275749
chr9	35812960	35815354	35814157	ENSG00000137133.10	-	protein_coding	KNOWN	HINT2	7	5	1.275749
chr9	35814451	35854847	35834649	ENSG00000137103.16	+	protein_coding	KNOWN	TMEM8B	8	14	1.119082
chr9	35816391	35828747	35822569	ENSG00000204930.9	-	protein_coding	KNOWN	FAM221B	4	8	1.275749
chr9	35858738	35865518	35862128	ENSG00000281205.1	+	lincRNA	KNOWN	LINC00950	1	1	0.953015
chr9	35859062	35859983	35859522	ENSG00000236083.1	-	unitary_pseudogene	KNOWN	OR13E1P	1	1	0.953015
chr9	35869263	35870601	35869932	ENSG00000168828.5	-	protein_coding	KNOWN	OR13J1	1	1	0.758846
chr9	35874810	35875194	35875002	ENSG00000233659.1	-	processed_pseudogene	KNOWN	NDUFA5P4	1	1	0.521456
chr9	35906192	35907141	35906666	ENSG00000196196.2	+	protein_coding	KNOWN	HRCT1	1	1	0.575075
chr9	35909483	35911686	35910584	ENSG00000235387.1	+	lincRNA	KNOWN	LINC00961	1	2	0.958709
chr9	35930012	35937151	35933581	ENSG00000231518.1	+	antisense	KNOWN	RP11-327L3.3	1	3	0.549295
chr9	35943210	35943934	35943572	ENSG00000225639.1	-	processed_pseudogene	KNOWN	PGAM1P2	1	1	0.549295
chr9	35957108	35958154	35957631	ENSG00000278889.3	-	polymorphic_pseudogene	KNOWN	OR2S2	2	1	0.784612
chr9	35957139	35958098	35957618	ENSG00000122718.5	-	protein_coding	KNOWN	OR2S2	1	1	0.784612
chr9	35971344	35972318	35971831	ENSG00000213866.3	-	processed_pseudogene	KNOWN	YBX1P10	1	1	0.605616
chr9	35991336	35992285	35991810	ENSG00000179443.5	-	unprocessed_pseudogene	KNOWN	OR13C6P	1	1	0.549842
chr9	36002909	36003867	36003388	ENSG00000243641.3	-	polymorphic_pseudogene	KNOWN	OR13C7	1	1	0.549842
chr9	36013184	36014133	36013658	ENSG00000228307.1	+	unprocessed_pseudogene	KNOWN	OR2S1P	1	1	0.376243
chr9	36021692	36022113	36021902	ENSG00000236110.1	+	unprocessed_pseudogene	KNOWN	OR2AM1P	1	1	0.376243
chr9	36036433	36124451	36080442	ENSG00000122707.11	+	protein_coding	KNOWN	RECK	3	21	0.545313
chr9	36072686	36072762	36072724	ENSG00000276730.1	+	misc_RNA	NOVEL	Hammerhead_HH9	1	1	0.602187
chr9	36136536	36163913	36150224	ENSG00000122694.15	+	protein_coding	KNOWN	GLIPR2	5	6	0.676729
chr9	36169394	36171334	36170364	ENSG00000185972.5	+	protein_coding	KNOWN	CCIN	1	1	0.714164
chr9	36190856	36304781	36247818	ENSG00000122705.16	+	protein_coding	KNOWN	CLTA	10	8	0.517823
chr9	36214441	36277056	36245748	ENSG00000159921.14	-	protein_coding	KNOWN	GNE	6	12	0.466495
chr9	36267783	36267922	36267852	ENSG00000222760.1	+	snRNA	KNOWN	RNU4-53P	1	1	0.340339
chr9	36303499	36304924	36304211	ENSG00000215283.3	-	processed_pseudogene	KNOWN	HMGB3P24	1	2	0.627415
chr9	36336396	36487548	36411972	ENSG00000137075.17	-	protein_coding	KNOWN	RNF38	10	13	0.251820
chr9	36499976	36500116	36500046	ENSG00000280576.1	-	miRNA	NOVEL	AL354932.1	1	1	0.482633
chr9	36572862	36677683	36625272	ENSG00000165304.7	+	protein_coding	KNOWN	MELK	14	18	0.275761
chr9	36823539	36823599	36823569	ENSG00000266255.1	-	miRNA	KNOWN	MIR4475	1	1	0.361025
chr9	36833275	37034185	36933730	ENSG00000196092.12	-	protein_coding	KNOWN	PAX5	16	10	0.371732
chr9	36856555	36861375	36858965	ENSG00000258885.1	+	antisense	KNOWN	RP11-344B23.2	1	2	0.561477
chr9	36864254	36864308	36864281	ENSG00000264922.1	-	miRNA	KNOWN	MIR4540	1	1	0.561477
chr9	36893462	36893531	36893496	ENSG00000265368.1	-	miRNA	KNOWN	MIR4476	1	1	0.586499
chr9	37002697	37008040	37005368	ENSG00000250850.2	+	antisense	KNOWN	RP11-297B17.3	1	2	0.445329
chr9	37046835	37047237	37047036	ENSG00000125385.9	+	processed_pseudogene	KNOWN	RP11-297B17.2	1	1	0.719018
chr9	37073531	37075792	37074661	ENSG00000232920.1	-	lincRNA	KNOWN	LINC01400	1	2	0.429027
chr9	37078813	37079776	37079294	ENSG00000260100.1	-	lincRNA	KNOWN	RP11-220I1.5	1	1	0.429027
chr9	37079857	37090507	37085182	ENSG00000281649.1	+	lincRNA	KNOWN	EBLN3	7	3	0.418689
chr9	37112548	37115490	37114019	ENSG00000233242.2	-	antisense	KNOWN	RP11-220I1.2	1	2	0.054902
chr9	37120539	37358149	37239344	ENSG00000147905.17	+	protein_coding	KNOWN	ZCCHC7	9	9	-0.049036
chr9	37160137	37160237	37160187	ENSG00000200502.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.178366
chr9	37205112	37205368	37205240	ENSG00000228292.1	-	processed_pseudogene	KNOWN	RP11-220I1.4	1	1	-0.139334
chr9	37296023	37296104	37296063	ENSG00000216070.1	-	miRNA	NOVEL	AL158155.1	1	1	-0.020035
chr9	37322259	37322371	37322315	ENSG00000206784.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.126757
chr9	37333857	37333957	37333907	ENSG00000252723.2	-	snRNA	KNOWN	RNU6-677P	1	1	-0.418492
chr9	37383178	37384434	37383806	ENSG00000224648.1	-	lincRNA	KNOWN	RP11-397D12.4	1	2	0.176881
chr9	37422666	37436990	37429828	ENSG00000137106.17	+	protein_coding	KNOWN	GRHPR	12	9	0.570996
chr9	37434177	37434586	37434381	ENSG00000236156.2	+	processed_pseudogene	KNOWN	CHCHD4P3	1	1	0.748690
chr9	37438114	37465399	37451756	ENSG00000168795.4	-	protein_coding	KNOWN	ZBTB5	1	2	0.596760
chr9	37477149	37478317	37477733	ENSG00000187988.5	+	processed_pseudogene	KNOWN	KCTD9P3	1	1	0.317995
chr9	37485935	37503697	37494816	ENSG00000137054.15	+	protein_coding	KNOWN	POLR1E	3	13	0.496851
chr9	37490421	37490893	37490657	ENSG00000230188.1	-	processed_pseudogene	KNOWN	RP11-405L18.4	1	1	0.549915
chr9	37509150	37510299	37509724	ENSG00000234160.1	+	antisense	KNOWN	RP11-613M10.6	1	2	0.546889
chr9	37510892	37576349	37543620	ENSG00000147912.12	-	protein_coding	KNOWN	FBXO10	5	11	0.443162
chr9	37512547	37592469	37552508	ENSG00000256966.6	-	protein_coding	KNOWN	RP11-613M10.8	3	11	0.382770
chr9	37582646	37592642	37587644	ENSG00000175768.12	-	protein_coding	KNOWN	TOMM5	5	4	0.129857
chr9	37588413	38068687	37828550	ENSG00000255872.3	-	protein_coding	KNOWN	RP11-613M10.9	1	12	0.311131
chr9	37636688	37637293	37636990	ENSG00000233111.1	-	processed_pseudogene	KNOWN	RAB1C	1	1	0.091992
chr9	37651000	37746904	37698952	ENSG00000070601.9	+	protein_coding	KNOWN	FRMPD1	3	16	0.151774
chr9	37661747	37662049	37661898	ENSG00000201287.1	-	misc_RNA	KNOWN	RN7SKP171	1	1	0.273512
chr9	37753803	37778972	37766387	ENSG00000165275.9	+	protein_coding	KNOWN	TRMT10B	9	9	0.390446
chr9	37766978	37801437	37784207	ENSG00000107371.12	-	protein_coding	KNOWN	EXOSC3	8	4	0.089034
chr9	37800502	37867666	37834084	ENSG00000122741.15	+	protein_coding	KNOWN	DCAF10	5	7	-0.003870
chr9	37836044	37836394	37836219	ENSG00000232454.2	+	processed_pseudogene	KNOWN	RP11-3J10.7	1	1	-0.197515
chr9	37878116	37879493	37878804	ENSG00000226055.2	+	processed_pseudogene	KNOWN	PAICSP1	1	2	0.016043
chr9	37879400	37904353	37891876	ENSG00000122696.12	-	protein_coding	KNOWN	SLC25A51	4	4	0.107440
chr9	37885683	37886390	37886036	ENSG00000213839.4	+	processed_pseudogene	KNOWN	TMX2P1	1	1	0.016043
chr9	37919134	38069211	37994172	ENSG00000107338.9	-	protein_coding	KNOWN	SHB	1	6	0.730716
chr9	37936707	37936768	37936737	ENSG00000251745.1	-	snRNA	KNOWN	RNU7-124P	1	1	0.962432
chr9	38146494	38146578	38146536	ENSG00000277122.1	+	miRNA	NOVEL	AL161448.1	1	1	0.337324
chr9	38147428	38147561	38147494	ENSG00000200026.1	+	snoRNA	NOVEL	U8	1	1	0.337324
chr9	38360427	38376430	38368428	ENSG00000223716.2	+	lincRNA	KNOWN	RP11-113O24.3	1	4	0.209858
chr9	38392664	38398661	38395662	ENSG00000137124.7	+	protein_coding	KNOWN	ALDH1B1	2	3	0.339545
chr9	38408994	38424447	38416720	ENSG00000137142.4	-	protein_coding	KNOWN	IGFBPL1	1	5	-0.003016
chr9	38452782	38454070	38453426	ENSG00000225254.2	-	processed_pseudogene	KNOWN	ARMC8P1	1	1	0.116795
chr9	38478471	38479350	38478910	ENSG00000215165.3	+	processed_pseudogene	KNOWN	TCEA1P3	1	1	-0.059172
chr9	38486859	38488338	38487598	ENSG00000229511.1	-	processed_pseudogene	KNOWN	GAS2L1P1	1	1	-0.059172
chr9	38504447	38505482	38504964	ENSG00000237487.1	-	processed_pseudogene	KNOWN	VN1R48P	1	1	-0.174182
chr9	38526831	38527032	38526931	ENSG00000243085.1	+	processed_pseudogene	KNOWN	RP11-392E22.3	1	1	-0.507921
chr9	38527097	38527912	38527504	ENSG00000176007.10	+	processed_pseudogene	KNOWN	FAM220BP	1	1	-0.507921
chr9	38540567	38545372	38542969	ENSG00000273036.2	-	lincRNA	KNOWN	FAM95C	2	3	-0.171043
chr9	38542314	38542569	38542441	ENSG00000259898.1	-	processed_pseudogene	KNOWN	CYP4F33P	1	1	-0.171043
chr9	38542389	38543215	38542802	ENSG00000272934.1	-	processed_transcript	KNOWN	RP11-392E22.10	1	2	-0.171043
chr9	38542479	38568422	38555450	ENSG00000272904.1	-	processed_transcript	KNOWN	RP11-392E22.11	1	3	0.157441
chr9	38543104	38543446	38543275	ENSG00000250989.1	-	processed_pseudogene	KNOWN	RP11-392E22.5	1	1	-0.171043
chr9	38566260	38568211	38567235	ENSG00000225345.3	-	transcribed_unprocessed_pseudogene	KNOWN	SNX18P3	2	1	0.291523
chr9	38571358	38620660	38596009	ENSG00000180071.19	-	protein_coding	KNOWN	ANKRD18A	3	16	-0.206672
chr9	38620474	38624990	38622732	ENSG00000204860.4	+	antisense	KNOWN	FAM201A	3	2	-0.450963
chr9	38643042	38643768	38643405	ENSG00000237557.1	+	processed_pseudogene	KNOWN	YWHABP1	1	1	0.051578
chr9	38680006	38680104	38680055	ENSG00000252725.1	+	snRNA	KNOWN	RNU6-765P	1	1	0.166760
chr9	38804007	38851916	38827961	ENSG00000228467.2	+	lincRNA	KNOWN	RP11-402N8.1	1	3	-0.361997
chr9	39016969	39039594	39028281	ENSG00000234680.1	+	unitary_pseudogene	KNOWN	VN2R3P	1	7	-0.224079
chr9	39072767	39288315	39180541	ENSG00000106714.17	-	protein_coding	KNOWN	CNTNAP3	12	24	-0.290455
chr9	39154075	39155479	39154777	ENSG00000226625.1	+	processed_pseudogene	KNOWN	RBM17P1	1	2	-0.335429
chr9	39159071	39160319	39159695	ENSG00000271454.1	+	processed_pseudogene	KNOWN	RP11-290L7.5	1	1	-0.335429
chr9	39173794	39174513	39174153	ENSG00000243695.1	-	processed_pseudogene	KNOWN	RP11-290L7.3	1	1	-0.294067
chr9	39191100	39191360	39191230	ENSG00000278825.1	+	misc_RNA	KNOWN	RN7SL640P	1	1	-0.272581
chr9	39355669	39361959	39358814	ENSG00000204849.7	+	protein_coding	KNOWN	SPATA31A1	2	4	0.112170
chr9	39359890	39369105	39364497	ENSG00000277024.1	-	transcribed_processed_pseudogene	KNOWN	RP11-347J14.4	2	2	0.112170
chr9	39371065	39376916	39373990	ENSG00000215112.6	+	lincRNA	KNOWN	FAM74A1	2	2	-0.038405
chr9	39384506	39405305	39394905	ENSG00000224038.1	-	lincRNA	KNOWN	RP11-347J14.8	1	3	-0.170825
chr9	39395737	39397406	39396571	ENSG00000231140.3	-	lincRNA	KNOWN	RP11-347J14.7	1	2	-0.218348
chr9	39443815	39508885	39476350	ENSG00000198416.9	-	transcribed_unprocessed_pseudogene	KNOWN	ZNF658B	2	4	-0.259894
chr9	39485379	39485865	39485622	ENSG00000229707.1	+	processed_pseudogene	KNOWN	SKP1P3	1	1	-0.374431
chr9	39631046	39632416	39631731	ENSG00000269692.1	+	processed_pseudogene	KNOWN	FKBP4P2	1	1	-0.530204
chr9	39651901	39652377	39652139	ENSG00000273994.1	-	processed_pseudogene	KNOWN	SDR42E1P1	1	1	-0.325928
chr9	39654241	39655531	39654886	ENSG00000234720.3	-	processed_pseudogene	KNOWN	ATP5A1P8	1	1	-0.325928
chr9	39734670	39735628	39735149	ENSG00000226108.2	+	processed_pseudogene	KNOWN	RAB28P1	1	2	-0.076514
chr9	39739747	39741193	39740470	ENSG00000232239.2	-	processed_pseudogene	KNOWN	RBPJP5	1	1	-0.076514
chr9	39807361	39810063	39808712	ENSG00000278175.2	-	lincRNA	KNOWN	GLIDR	3	3	-0.225124
chr9	39809562	39810019	39809790	ENSG00000229273.1	+	processed_pseudogene	KNOWN	RP11-104G3.2	1	1	-0.225946
chr9	39817530	39818923	39818226	ENSG00000204837.3	-	unprocessed_pseudogene	KNOWN	RP11-204M4.2	1	2	-0.265111
chr9	39873931	39874390	39874160	ENSG00000276692.1	-	processed_pseudogene	KNOWN	RP11-104G3.7	1	1	-0.383849
chr9	39886861	39887144	39887002	ENSG00000277774.1	-	misc_RNA	KNOWN	RN7SL763P	1	1	-0.383849
chr9	39892446	39892540	39892493	ENSG00000252724.1	+	snoRNA	NOVEL	SNORA70	1	1	-0.598988
chr9	39892550	39892895	39892722	ENSG00000232798.1	+	processed_pseudogene	KNOWN	RP11-204M4.1	1	1	-0.598988
chr9	39983821	39984401	39984111	ENSG00000184961.5	-	processed_pseudogene	KNOWN	AL772307.1	1	1	-0.232072
chr9	40105822	40106527	40106174	ENSG00000237846.1	+	processed_pseudogene	KNOWN	RP11-216M21.1	1	1	-0.386980
chr9	40121962	40122540	40122251	ENSG00000230804.2	+	unprocessed_pseudogene	KNOWN	C2orf27AP3	1	1	0.206894
chr9	40130921	40153147	40142034	ENSG00000228136.1	+	lincRNA	KNOWN	RP11-216M21.5	1	3	-0.116438
chr9	40131747	40132218	40131982	ENSG00000236966.1	+	processed_pseudogene	KNOWN	RP11-216M21.4	1	1	-0.022520
chr9	40223285	40266392	40244838	ENSG00000183148.6	+	protein_coding	KNOWN	ANKRD20A2	3	15	-0.579192
chr9	40233923	40234029	40233976	ENSG00000212441.1	+	snRNA	KNOWN	RNU6-1269P	1	1	-0.815890
chr9	40264971	40329221	40297096	ENSG00000240240.8	+	processed_transcript	KNOWN	RP11-146D12.2	3	11	-0.283529
chr9	40291275	40291502	40291388	ENSG00000234812.1	-	processed_pseudogene	KNOWN	RP11-146D12.6	1	1	-0.055049
chr9	40293082	40293955	40293518	ENSG00000231390.1	+	unprocessed_pseudogene	KNOWN	SNX18P8	1	1	-0.055049
chr9	40321299	40329221	40325260	ENSG00000223839.7	+	lincRNA	KNOWN	FAM95B1	14	5	-0.054353
chr9	40332995	40333460	40333227	ENSG00000224681.1	-	unprocessed_pseudogene	KNOWN	RP11-146D12.5	1	1	0.134220
chr9	40346144	40347052	40346598	ENSG00000227069.1	-	processed_pseudogene	KNOWN	CNN2P2	1	1	0.134220
chr9	40348599	40349791	40349195	ENSG00000232433.2	+	processed_pseudogene	KNOWN	GXYLT1P3	1	1	0.134220
chr9	40358454	40358682	40358568	ENSG00000274157.1	+	processed_pseudogene	KNOWN	RP11-341A11.3	1	1	-0.235583
chr9	40481558	40497592	40489575	ENSG00000278122.1	-	unprocessed_pseudogene	KNOWN	AQP7P5	1	7	-0.042150
chr9	40481559	40497591	40489575	ENSG00000274067.1	-	unprocessed_pseudogene	KNOWN	ABC12-47964100C23.1	1	7	-0.042151
chr9	40497850	40566779	40532314	ENSG00000184906.9	+	lincRNA	KNOWN	AC129778.2	7	4	-0.104784
chr9	40505399	40566281	40535840	ENSG00000276500.1	-	lincRNA	KNOWN	BMS1P14	1	2	-0.148582
chr9	40611252	40622155	40616703	ENSG00000276266.1	-	lincRNA	KNOWN	CH17-80A12.1	1	5	-0.511005
chr9	40641841	40642117	40641979	ENSG00000225380.4	-	IG_V_pseudogene	KNOWN	IGKV1OR9-2	1	1	-0.013618
chr9	40685887	40685968	40685927	ENSG00000273743.1	-	miRNA	NOVEL	FP325318.1	1	1	-0.425692
chr9	40755407	40767875	40761641	ENSG00000276963.1	-	unprocessed_pseudogene	KNOWN	RP11-318K12.1	1	6	-0.243799
chr9	40759600	40759706	40759653	ENSG00000278331.1	-	snRNA	KNOWN	RNU6-156P	1	1	-0.243799
chr9	40767870	40806344	40787107	ENSG00000275390.1	+	lincRNA	KNOWN	RP11-318K12.2	2	5	-0.321439
chr9	40883634	40883763	40883698	ENSG00000276868.1	+	processed_pseudogene	KNOWN	RP11-318K12.3	1	1	0.021602
chr9	40905509	40905584	40905546	ENSG00000274550.1	-	miRNA	NOVEL	AL353626.1	1	1	0.109803
chr9	40915323	40915405	40915364	ENSG00000275704.1	-	miRNA	NOVEL	FP565210.1	1	1	-0.151565
chr9	40928770	40928852	40928811	ENSG00000278366.1	-	miRNA	NOVEL	AL353763.1	1	1	-0.151565
chr9	40929010	40929092	40929051	ENSG00000275377.1	-	miRNA	KNOWN	MIR1299	1	1	-0.151565
chr9	40992249	41218410	41105329	ENSG00000276291.5	+	transcribed_unprocessed_pseudogene	KNOWN	FRG1HP	5	10	-0.106722
chr9	41006999	41074617	41040808	ENSG00000277778.1	-	lincRNA	KNOWN	PGM5P2	1	9	-0.140847
chr9	41012231	41014133	41013182	ENSG00000280077.1	+	TEC	KNOWN	RP11-87H9.4	1	1	-0.194222
chr9	41061290	41062917	41062103	ENSG00000279456.1	+	TEC	KNOWN	RP11-87H9.5	1	1	-0.160466
chr9	41073710	41076392	41075051	ENSG00000225655.5	+	lincRNA	KNOWN	PGM5-AS1	2	2	-0.089847
chr9	41100794	41106229	41103511	ENSG00000276462.1	-	lincRNA	KNOWN	BX255923.3	2	4	0.132491
chr9	41126430	41128463	41127446	ENSG00000273514.1	-	protein_coding	KNOWN	FOXD4L6	1	1	0.137795
chr9	41131306	41199261	41165283	ENSG00000215126.10	-	protein_coding	KNOWN	CBWD7	18	22	-0.153245
chr9	41233755	41233835	41233795	ENSG00000276029.1	+	miRNA	KNOWN	MIR4477A	1	1	-0.181370
chr9	41237440	41237557	41237498	ENSG00000277049.1	-	rRNA	NOVEL	5S_rRNA	1	1	-0.181370
chr9	41269916	41273997	41271956	ENSG00000279561.2	-	TEC	KNOWN	RP11-4L24.4	2	2	-0.137711
chr9	41276280	41282846	41279563	ENSG00000275450.1	+	lincRNA	KNOWN	RP11-4L24.3	1	3	-0.133041
chr9	41280460	41280787	41280623	ENSG00000278647.1	+	transcribed_processed_pseudogene	KNOWN	CDK2AP2P1	1	1	-0.133041
chr9	41292887	41294125	41293506	ENSG00000274680.1	+	processed_pseudogene	KNOWN	MYO5BP1	1	1	-0.433019
chr9	41310816	41332962	41321889	ENSG00000276502.1	-	lincRNA	KNOWN	RP11-187C18.5	1	3	-0.474902
chr9	41341000	41342041	41341520	ENSG00000276832.1	-	unprocessed_pseudogene	KNOWN	RP11-187C18.4	1	3	-0.247944
chr9	41479960	41480548	41480254	ENSG00000275160.1	+	processed_pseudogene	KNOWN	RP11-187C18.3	1	1	-0.713505
chr9	41573156	41573453	41573304	ENSG00000277340.1	-	processed_pseudogene	KNOWN	RP11-157L3.3	1	1	-0.620432
chr9	41573512	41573606	41573559	ENSG00000276094.1	-	snoRNA	NOVEL	SNORA70	1	1	-0.620432
chr9	41578903	41579186	41579044	ENSG00000276562.1	+	misc_RNA	KNOWN	RN7SL565P	1	1	-0.620432
chr9	41644430	41644770	41644600	ENSG00000275493.1	-	processed_pseudogene	KNOWN	FAM27D1	1	1	-0.416349
chr9	41644771	41644981	41644876	ENSG00000278077.1	+	processed_pseudogene	KNOWN	RP11-157L3.10	1	1	-0.416349
chr9	41647825	41648035	41647930	ENSG00000278054.1	-	processed_pseudogene	KNOWN	RP11-34H11.3	1	1	-0.416349
chr9	41648023	41648425	41648224	ENSG00000276135.1	+	processed_pseudogene	KNOWN	FAM27E2	1	1	-0.416349
chr9	41651935	41652172	41652053	ENSG00000276412.1	-	processed_pseudogene	KNOWN	RP11-157L3.9	1	1	0.228771
chr9	41652895	41652973	41652934	ENSG00000277979.1	-	processed_pseudogene	KNOWN	RP11-157L3.6	1	1	0.228771
chr9	41657708	41699072	41678390	ENSG00000275239.4	-	lincRNA	KNOWN	RP11-157L3.12	4	4	0.212879
chr9	41672295	41672406	41672350	ENSG00000278028.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.206928
chr9	41700480	41700696	41700588	ENSG00000274688.1	-	processed_pseudogene	KNOWN	RP11-34H11.6	1	1	0.204467
chr9	41700682	41701096	41700889	ENSG00000278001.1	+	processed_pseudogene	KNOWN	RP11-157L3.11	1	1	0.204467
chr9	41760088	41764175	41762131	ENSG00000275297.1	+	processed_transcript	KNOWN	RP11-292F9.1	2	3	-0.128274
chr9	41890314	42129510	42009912	ENSG00000154529.14	-	protein_coding	KNOWN	CNTNAP3B	15	24	-0.426888
chr9	41974362	41975768	41975065	ENSG00000237207.2	+	processed_pseudogene	KNOWN	RBM17P3	1	2	-0.331816
chr9	41979352	41983753	41981552	ENSG00000270909.1	+	processed_pseudogene	KNOWN	RP11-24B13.2	1	2	-0.331816
chr9	42011350	42011610	42011480	ENSG00000273717.1	+	misc_RNA	KNOWN	RN7SL343P	1	1	-0.232072
chr9	42183659	42189882	42186770	ENSG00000185775.9	+	protein_coding	KNOWN	SPATA31A6	2	4	-0.361726
chr9	42196333	42196662	42196497	ENSG00000239986.2	-	processed_pseudogene	KNOWN	RP11-366N18.2	1	1	0.133333
chr9	42199000	42204988	42201994	ENSG00000277260.1	+	lincRNA	KNOWN	FAM74A7	1	2	0.133333
chr9	42213841	42213918	42213879	ENSG00000276277.1	-	processed_pseudogene	KNOWN	RP11-366N18.5	1	1	-0.268184
chr9	42231811	42354454	42293132	ENSG00000275649.1	+	lincRNA	KNOWN	RP11-286O1.1	1	4	-0.257006
chr9	42384805	42386136	42385470	ENSG00000268234.1	+	processed_pseudogene	KNOWN	FKBP4P6	1	1	-0.181238
chr9	42408526	42409006	42408766	ENSG00000277213.1	-	processed_pseudogene	KNOWN	SDR42E1P2	1	1	-0.421001
chr9	42410830	42412150	42411490	ENSG00000234861.2	-	processed_pseudogene	KNOWN	ATP5A1P5	1	1	-0.333314
chr9	42492663	42493570	42493116	ENSG00000227353.1	+	processed_pseudogene	KNOWN	RAB28P3	1	2	-0.311550
chr9	42497704	42499134	42498419	ENSG00000227924.2	-	processed_pseudogene	KNOWN	RBPJP6	1	1	-0.311550
chr9	42566679	42569353	42568016	ENSG00000237357.2	-	lincRNA	KNOWN	RP11-475I24.3	2	3	-0.018508
chr9	42568865	42569315	42569090	ENSG00000212952.6	+	processed_pseudogene	KNOWN	RP11-475I24.9	1	1	-0.018508
chr9	42579414	42586534	42582974	ENSG00000229311.1	-	lincRNA	KNOWN	RP11-475I24.8	1	3	-0.026653
chr9	42625436	42626813	42626124	ENSG00000204816.5	+	unprocessed_pseudogene	KNOWN	RP11-475I24.1	1	2	-0.383742
chr9	42636788	42637139	42636963	ENSG00000230245.2	-	processed_pseudogene	KNOWN	RP11-475I24.7	1	1	-0.282688
chr9	42667506	42668887	42668196	ENSG00000216829.6	-	unprocessed_pseudogene	KNOWN	RP11-175I6.1	1	2	-0.185118
chr9	42707800	42714539	42711169	ENSG00000233424.2	+	lincRNA	KNOWN	RP11-175I6.5	1	3	-0.176672
chr9	42795392	42800672	42798032	ENSG00000204818.4	+	unprocessed_pseudogene	KNOWN	ADGRF5P2	1	5	-0.165945
chr9	42817105	42823213	42820159	ENSG00000224537.1	-	unprocessed_pseudogene	KNOWN	MEP1AP4	1	4	-0.309822
chr9	42852675	42894751	42873713	ENSG00000236816.2	+	unprocessed_pseudogene	KNOWN	ANKRD20A7P	1	15	-0.178885
chr9	42863200	42863306	42863253	ENSG00000238529.1	+	snRNA	KNOWN	RNU6-599P	1	1	0.109586
chr9	42901238	42920095	42910666	ENSG00000170165.5	+	unprocessed_pseudogene	KNOWN	CR848007.2	1	8	-0.449471
chr9	42921443	42921670	42921556	ENSG00000273900.1	-	processed_pseudogene	KNOWN	RP11-459O16.7	1	1	-0.318414
chr9	42923277	42924144	42923710	ENSG00000275144.1	+	unprocessed_pseudogene	KNOWN	SNX18P5	1	1	-0.318414
chr9	42950566	42951630	42951098	ENSG00000230635.2	+	unprocessed_pseudogene	KNOWN	CYP4F60P	1	3	0.188422
chr9	42959280	42960066	42959673	ENSG00000229079.1	-	processed_pseudogene	KNOWN	CR848007.5	1	1	0.188422
chr9	42972386	42973289	42972837	ENSG00000213816.3	-	processed_pseudogene	KNOWN	CNN2P4	1	1	-0.249045
chr9	42974855	42978320	42976587	ENSG00000276591.1	+	transcribed_processed_pseudogene	KNOWN	GXYLT1P5	2	2	-0.249045
chr9	42978851	42979918	42979384	ENSG00000277697.1	+	lincRNA	KNOWN	RP11-459O16.9	1	2	-0.249045
chr9	42981772	42988167	42984969	ENSG00000276128.1	+	lincRNA	KNOWN	RP11-459O16.8	1	2	-0.249045
chr9	43109628	43127172	43118400	ENSG00000277737.2	-	protein_coding	KNOWN	FP325317.1	1	7	0.197549
chr9	60519734	60519817	60519775	ENSG00000274431.1	+	miRNA	NOVEL	BX088702.1	1	1	-0.212863
chr9	60521458	60521541	60521499	ENSG00000276235.1	+	miRNA	NOVEL	BX088702.2	1	1	-0.212863
chr9	60522897	60522978	60522937	ENSG00000277648.1	+	miRNA	NOVEL	BX088702.3	1	1	-0.212863
chr9	60523280	60523362	60523321	ENSG00000277886.1	+	miRNA	NOVEL	BX088702.4	1	1	-0.212863
chr9	60546920	60547154	60547037	ENSG00000277598.1	-	processed_pseudogene	KNOWN	RP11-49E18.1	1	1	-0.342830
chr9	60914374	60920650	60917512	ENSG00000276581.2	+	protein_coding	KNOWN	SPATA31A5	1	4	-0.186110
chr9	60918581	60927822	60923201	ENSG00000275628.1	-	lincRNA	KNOWN	RP11-144A16.6	1	2	-0.186110
chr9	60927098	60927491	60927294	ENSG00000274916.1	-	transcribed_processed_pseudogene	KNOWN	RP11-144A16.5	1	1	-0.186110
chr9	60929774	60936746	60933260	ENSG00000274516.1	+	lincRNA	KNOWN	FAM74A6	2	3	-0.261329
chr9	60929927	60930407	60930167	ENSG00000273676.1	+	transcribed_processed_pseudogene	KNOWN	RP11-144A16.3	1	1	-0.252178
chr9	60943311	60964185	60953748	ENSG00000276422.1	-	lincRNA	KNOWN	RP11-144A16.8	3	3	-0.217360
chr9	60944555	60944636	60944595	ENSG00000278485.1	-	processed_pseudogene	KNOWN	RP11-144A16.4	1	1	-0.263837
chr9	61190003	61196280	61193141	ENSG00000276040.4	+	protein_coding	KNOWN	SPATA31A7	9	4	0.038694
chr9	61194211	61203446	61198828	ENSG00000277412.1	-	antisense	KNOWN	RP11-101E5.6	1	2	0.038694
chr9	61202718	61203087	61202902	ENSG00000276149.1	-	transcribed_processed_pseudogene	KNOWN	RP11-101E5.2	1	1	0.038694
chr9	61205258	61212373	61208815	ENSG00000274583.1	+	transcribed_processed_pseudogene	KNOWN	FAM74A4	3	3	-0.025522
chr9	61229913	61231863	61230888	ENSG00000275676.1	-	lincRNA	KNOWN	RP11-101E5.1	1	2	-0.311209
chr9	61427617	61427877	61427747	ENSG00000276522.1	-	misc_RNA	KNOWN	RN7SL462P	1	1	-0.137876
chr9	61581813	61582675	61582244	ENSG00000277109.1	+	unprocessed_pseudogene	KNOWN	RP11-160N1.11	1	2	-0.079195
chr9	61615876	61627683	61621779	ENSG00000231248.2	+	lincRNA	KNOWN	RP11-160N1.9	1	4	0.287716
chr9	61642383	61642494	61642438	ENSG00000238933.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.091992
chr9	61659733	61662690	61661211	ENSG00000204814.5	+	lincRNA	KNOWN	RP11-160N1.10	2	3	0.317552
chr9	61665579	61666386	61665982	ENSG00000231454.2	+	processed_pseudogene	KNOWN	RP11-160N1.8	1	2	0.317552
chr9	61789143	61789426	61789284	ENSG00000273940.1	+	misc_RNA	KNOWN	RN7SL722P	1	1	0.000000
chr9	61854162	61855331	61854746	ENSG00000154537.4	+	lincRNA	KNOWN	FAM27C	1	2	0.178407
chr9	61858710	61858908	61858809	ENSG00000277624.1	+	processed_pseudogene	KNOWN	RP11-374M1.11	1	1	0.178407
chr9	61861853	61862567	61862210	ENSG00000170152.4	-	processed_pseudogene	KNOWN	RP11-374M1.7	1	2	0.178407
chr9	61861995	61862336	61862165	ENSG00000204805.8	+	processed_pseudogene	KNOWN	FAM27E4	1	1	0.178407
chr9	61865755	61866965	61866360	ENSG00000235659.1	-	lincRNA	KNOWN	RP11-374M1.5	1	2	0.178407
chr9	61868727	61887084	61877905	ENSG00000223379.1	+	lincRNA	KNOWN	RP11-374M1.4	1	2	0.301268
chr9	61883640	61883751	61883695	ENSG00000238749.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.310415
chr9	61898805	61911022	61904913	ENSG00000229697.2	-	lincRNA	KNOWN	RP11-374M1.3	3	4	0.138789
chr9	61912704	61913115	61912909	ENSG00000276795.1	+	processed_pseudogene	KNOWN	RP11-374M1.10	1	1	-0.070114
chr9	61944232	61945136	61944684	ENSG00000276845.1	-	unprocessed_pseudogene	KNOWN	RP11-374M1.9	1	2	-0.070859
chr9	61972240	61976380	61974310	ENSG00000231527.5	+	processed_transcript	KNOWN	RP11-374M1.2	4	4	0.330931
chr9	62028426	62076349	62052387	ENSG00000231838.1	+	lincRNA	KNOWN	RP11-449H15.2	1	3	-0.242804
chr9	62266319	62266919	62266619	ENSG00000231995.2	+	processed_pseudogene	KNOWN	RP11-111F5.2	1	1	-0.961120
chr9	62349941	62351536	62350738	ENSG00000231212.1	-	lincRNA	KNOWN	RP11-111F5.3	2	3	-0.673683
chr9	62357834	62358140	62357987	ENSG00000236450.1	-	processed_pseudogene	KNOWN	RP11-111F5.1	1	1	-0.662896
chr9	62358191	62358285	62358238	ENSG00000252133.1	-	snoRNA	NOVEL	SNORA70	1	1	-0.662896
chr9	62363581	62363864	62363722	ENSG00000275230.1	+	misc_RNA	KNOWN	RN7SL544P	1	1	-0.662896
chr9	62374128	62376836	62375482	ENSG00000204802.3	-	lincRNA	KNOWN	RP11-111F5.4	4	3	-0.444391
chr9	62376161	62435199	62405680	ENSG00000227449.8	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-111F5.5	3	3	-0.418847
chr9	62387171	62394004	62390587	ENSG00000233651.2	-	lincRNA	KNOWN	RP11-111F5.8	1	3	-0.409528
chr9	62395370	62395678	62395524	ENSG00000226429.2	-	unprocessed_pseudogene	KNOWN	RP11-111F5.6	1	1	-0.384911
chr9	62444256	62444634	62444445	ENSG00000224603.1	-	processed_pseudogene	KNOWN	RP11-96J15.1	1	1	-0.145997
chr9	62474948	62476333	62475640	ENSG00000204801.7	-	unprocessed_pseudogene	KNOWN	RP11-96J15.2	1	2	-0.212487
chr9	62515191	62522018	62518604	ENSG00000232827.2	+	lincRNA	KNOWN	LINC01189	1	3	-0.302287
chr9	62532337	62534724	62533530	ENSG00000226007.2	+	lincRNA	KNOWN	RP11-211N8.2	3	3	-0.206722
chr9	62532397	62532853	62532625	ENSG00000212951.5	-	unprocessed_pseudogene	KNOWN	RP11-211N8.3	1	1	-0.206722
chr9	62559839	62569907	62564873	ENSG00000278213.1	+	unprocessed_pseudogene	KNOWN	CNTNAP3P5	1	6	-0.305972
chr9	62601226	62602672	62601949	ENSG00000234217.2	+	processed_pseudogene	KNOWN	RBPJP7	1	1	-0.320655
chr9	62606797	62607748	62607272	ENSG00000236825.2	-	processed_pseudogene	KNOWN	RAB28P2	1	2	-0.320655
chr9	62609725	62610799	62610262	ENSG00000234451.1	-	processed_pseudogene	KNOWN	RP11-211N8.6	1	1	-0.175667
chr9	62686912	62688190	62687551	ENSG00000241571.2	+	processed_pseudogene	KNOWN	ATP5A1P7	1	1	-0.185744
chr9	62690033	62690534	62690283	ENSG00000234276.1	+	processed_pseudogene	KNOWN	SDR42E1P3	1	1	-0.340968
chr9	62710036	62711398	62710717	ENSG00000235256.1	-	processed_pseudogene	KNOWN	FKBP4P7	1	1	-0.122513
chr9	62801461	62813486	62807473	ENSG00000238113.6	+	lincRNA	KNOWN	LINC01410	3	5	0.090989
chr9	62802320	62802438	62802379	ENSG00000202474.1	-	rRNA	KNOWN	RNA5SP283	1	1	0.172610
chr9	62837748	62838372	62838060	ENSG00000229422.1	-	processed_pseudogene	KNOWN	RP11-262H14.5	1	1	-0.216923
chr9	62843919	62844170	62844044	ENSG00000184523.3	+	processed_pseudogene	KNOWN	PTGER4P2	1	1	-0.216923
chr9	62844818	62845184	62845001	ENSG00000237451.3	+	processed_pseudogene	KNOWN	CDK2AP2P2	1	1	-0.216923
chr9	62856999	62898087	62877543	ENSG00000234665.8	-	lincRNA	KNOWN	RP11-262H14.3	7	6	-0.294792
chr9	62857208	62858484	62857846	ENSG00000238245.2	+	processed_pseudogene	KNOWN	MYO5BP2	1	1	-0.342809
chr9	62860873	62864957	62862915	ENSG00000227582.2	-	transcribed_processed_pseudogene	KNOWN	ADGRF5P1	2	2	-0.342809
chr9	62888535	62889921	62889228	ENSG00000219693.3	+	unprocessed_pseudogene	KNOWN	RP11-262H14.11	1	2	-0.172367
chr9	62897449	62900104	62898776	ENSG00000170161.6	+	lincRNA	KNOWN	RP11-262H14.4	3	3	-0.520347
chr9	62924911	62934964	62929937	ENSG00000273509.1	+	unprocessed_pseudogene	KNOWN	CNTNAP3P1	1	6	-0.165200
chr9	63025597	63025993	63025795	ENSG00000244081.1	+	unprocessed_pseudogene	KNOWN	RP11-350D23.4	1	1	-0.195989
chr9	63055641	63059217	63057429	ENSG00000198312.4	+	unprocessed_pseudogene	KNOWN	BMS1P9	1	6	0.364451
chr9	63111255	63127100	63119177	ENSG00000182021.9	-	lincRNA	KNOWN	RP11-381O7.3	6	5	-0.092433
chr9	63127359	63143401	63135380	ENSG00000176115.9	+	unprocessed_pseudogene	KNOWN	AQP7P4	1	7	0.416079
chr9	63189961	63190027	63189994	ENSG00000265285.1	+	miRNA	NOVEL	AL591379.1	1	1	-0.704885
chr9	63317067	63333091	63325079	ENSG00000186466.5	-	unprocessed_pseudogene	KNOWN	AQP7P1	1	7	-0.106399
chr9	63330326	63343660	63336993	ENSG00000228522.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-236F9.2	2	5	-0.101488
chr9	63372803	63380011	63376407	ENSG00000237238.2	-	unprocessed_pseudogene	KNOWN	BMS1P10	1	8	0.171960
chr9	63485285	63485366	63485325	ENSG00000276059.1	-	miRNA	NOVEL	FO203515.1	1	1	-0.232072
chr9	63581254	63581834	63581544	ENSG00000233555.2	-	processed_pseudogene	KNOWN	RP11-452D2.1	1	1	-0.113233
chr9	63703065	63703755	63703410	ENSG00000234042.1	+	processed_pseudogene	KNOWN	RP11-452D2.2	1	1	-0.789364
chr9	63719864	63720441	63720152	ENSG00000268951.1	+	processed_pseudogene	KNOWN	RP11-149F8.3	1	1	0.363294
chr9	63728877	63744910	63736893	ENSG00000224267.1	+	lincRNA	KNOWN	RP11-149F8.5	1	3	0.211341
chr9	63729702	63730173	63729937	ENSG00000225360.1	+	processed_pseudogene	KNOWN	RP11-149F8.4	1	1	0.302934
chr9	63761546	63762824	63762185	ENSG00000228656.1	-	processed_pseudogene	KNOWN	MYO5BP3	1	1	-0.536867
chr9	63774870	63775241	63775055	ENSG00000226020.4	-	processed_pseudogene	KNOWN	CDK2AP2P3	1	1	-0.473493
chr9	63775892	63776143	63776017	ENSG00000239684.2	-	processed_pseudogene	KNOWN	PTGER4P3	1	1	-0.473493
chr9	63802144	63814159	63808151	ENSG00000225411.2	-	lincRNA	KNOWN	RP11-764K9.1	1	5	-0.235573
chr9	63813190	63813307	63813248	ENSG00000207277.1	+	rRNA	KNOWN	RNA5SP284	1	1	-0.048871
chr9	63817748	63818462	63818105	ENSG00000232815.1	-	unprocessed_pseudogene	KNOWN	DUX4L50	1	1	-0.048871
chr9	63819574	63819654	63819614	ENSG00000266017.1	+	miRNA	KNOWN	MIR4477B	1	1	-0.048871
chr9	63832127	63859641	63845884	ENSG00000215548.2	-	unprocessed_pseudogene	KNOWN	FRG1JP	1	9	-0.391571
chr9	63974762	64004155	63989458	ENSG00000204790.9	-	unprocessed_pseudogene	KNOWN	BX255923.2	1	7	-0.042404
chr9	64082429	64082534	64082481	ENSG00000275068.1	+	snRNA	NOVEL	U6	1	1	-0.320790
chr9	64369394	64413142	64391268	ENSG00000172014.12	+	protein_coding	KNOWN	ANKRD20A4	3	15	-0.267329
chr9	64380194	64380300	64380247	ENSG00000238551.1	+	snRNA	KNOWN	RNU6-1193P	1	1	-0.043236
chr9	64439346	64440180	64439763	ENSG00000224185.1	+	processed_pseudogene	KNOWN	SNX18P9	1	1	-0.186724
chr9	64462819	64463196	64463007	ENSG00000229156.1	+	processed_pseudogene	KNOWN	RP11-250H24.2	1	1	-0.114459
chr9	64465463	64466498	64465980	ENSG00000224106.1	+	unprocessed_pseudogene	KNOWN	CYP4F25P	1	3	-0.114459
chr9	64473040	64473826	64473433	ENSG00000224762.1	-	processed_pseudogene	KNOWN	CR769776.3	1	1	0.014633
chr9	64486164	64487069	64486616	ENSG00000235832.2	-	processed_pseudogene	KNOWN	CNN2P3	1	1	0.014633
chr9	64488600	64489786	64489193	ENSG00000235310.1	+	processed_pseudogene	KNOWN	GXYLT1P6	1	1	0.014633
chr9	64498517	64498745	64498631	ENSG00000277869.1	+	processed_pseudogene	KNOWN	RP11-250H24.7	1	1	-0.441001
chr9	64621560	64637586	64629573	ENSG00000181997.8	-	unprocessed_pseudogene	KNOWN	AQP7P2	1	7	-0.049197
chr9	64637845	64652556	64645200	ENSG00000176134.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-574E24.3	2	4	0.278712
chr9	64705734	64709311	64707522	ENSG00000225883.2	-	unprocessed_pseudogene	KNOWN	BMS1P11	1	6	-0.052398
chr9	64737403	64737755	64737579	ENSG00000235932.2	-	processed_pseudogene	KNOWN	RP11-250H24.6	1	1	-0.284572
chr9	64765054	64765535	64765294	ENSG00000156755.10	-	IG_V_pseudogene	KNOWN	IGKV1OR-2	1	2	-0.218709
chr9	64809342	64809423	64809382	ENSG00000239028.1	-	miRNA	NOVEL	AL359955.1	1	1	-0.371182
chr9	64810865	64811429	64811147	ENSG00000271225.1	-	processed_pseudogene	KNOWN	BNIP3P4	1	1	-0.344579
chr9	64817870	64836341	64827105	ENSG00000197550.3	+	unprocessed_pseudogene	KNOWN	RP11-460N11.2	1	5	-0.309912
chr9	64878790	64889063	64883926	ENSG00000223602.2	-	unprocessed_pseudogene	KNOWN	AC125634.1	1	5	-0.125037
chr9	64880369	64880475	64880422	ENSG00000206804.1	-	snRNA	KNOWN	RNU6-1293P	1	1	-0.125037
chr9	65189995	65193610	65191802	ENSG00000224599.1	-	unprocessed_pseudogene	KNOWN	BMS1P12	1	5	-0.053898
chr9	65219987	65230861	65225424	ENSG00000236252.2	-	transcribed_processed_pseudogene	KNOWN	RP11-15J10.8	2	5	0.166762
chr9	65222522	65222777	65222649	ENSG00000267085.1	-	processed_pseudogene	KNOWN	RP11-15J10.9	1	1	0.215863
chr9	65250543	65250826	65250684	ENSG00000204780.5	-	IG_V_pseudogene	KNOWN	IGKV1OR9-1	1	1	-0.022265
chr9	65282101	65285209	65283655	ENSG00000204779.2	-	protein_coding	KNOWN	FOXD4L5	1	1	-0.596807
chr9	65287914	65323015	65305464	ENSG00000204778.4	-	unprocessed_pseudogene	KNOWN	RP11-15J10.1	1	9	-0.273176
chr9	65573384	65573495	65573439	ENSG00000276723.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.091992
chr9	65646982	65652679	65649830	ENSG00000280286.1	-	unprocessed_pseudogene	KNOWN	FRG1KP	1	4	-0.170980
chr9	65668805	65734041	65701423	ENSG00000147996.16	+	protein_coding	KNOWN	CBWD5	33	17	-0.404615
chr9	65736555	65738784	65737669	ENSG00000184659.5	+	protein_coding	KNOWN	FOXD4L4	1	1	-0.395946
chr9	65770955	65771434	65771194	ENSG00000204776.6	+	IG_V_pseudogene	KNOWN	IGKV1OR-3	1	2	-0.297420
chr9	65798726	65799124	65798925	ENSG00000237904.2	+	processed_pseudogene	KNOWN	RP11-460E7.9	1	1	-0.191462
chr9	65816932	65817472	65817202	ENSG00000235893.5	-	processed_pseudogene	KNOWN	RP11-460E7.8	1	1	-0.269408
chr9	65828120	65831696	65829908	ENSG00000231701.1	+	unprocessed_pseudogene	KNOWN	BMS1P13	1	6	-0.010236
chr9	65865190	65877274	65871232	ENSG00000279955.3	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-1221G12.2	2	6	0.148679
chr9	65878766	65894790	65886778	ENSG00000279688.1	+	unprocessed_pseudogene	KNOWN	AQP7P3	1	7	0.464387
chr9	66014525	66020816	66017670	ENSG00000274893.1	-	lincRNA	KNOWN	RP11-15E1.5	1	2	-0.389660
chr9	66017643	66017868	66017755	ENSG00000273668.1	-	transcribed_processed_pseudogene	KNOWN	RP11-15E1.4	1	1	-0.389660
chr9	66022661	66027719	66025190	ENSG00000275026.1	-	transcribed_processed_pseudogene	KNOWN	GXYLT1P4	3	3	-0.389660
chr9	66029264	66030169	66029716	ENSG00000278068.1	+	processed_pseudogene	KNOWN	RP11-15E1.6	1	1	-0.344820
chr9	66042646	66043342	66042994	ENSG00000278720.1	+	processed_pseudogene	KNOWN	RP11-399F4.1	1	1	-0.150953
chr9	66047084	66055006	66051045	ENSG00000274628.4	-	processed_transcript	KNOWN	FAM95B1	6	5	-0.016269
chr9	66082350	66083187	66082768	ENSG00000229146.2	-	processed_pseudogene	KNOWN	SNX18P4	1	1	0.164676
chr9	66084804	66085031	66084917	ENSG00000276257.1	+	processed_pseudogene	KNOWN	RP11-327I22.3	1	1	0.164676
chr9	66106815	66153135	66129975	ENSG00000276203.4	-	protein_coding	KNOWN	ANKRD20A3	7	15	-0.594661
chr9	66142221	66142327	66142274	ENSG00000275030.1	-	snRNA	KNOWN	RNU6-538P	1	1	-0.510166
chr9	66159954	66179430	66169692	ENSG00000278849.1	-	lincRNA	KNOWN	RP11-327I22.5	2	5	-0.371079
chr9	66253424	66254464	66253944	ENSG00000233765.1	-	unprocessed_pseudogene	KNOWN	RP11-154P18.2	1	3	0.055728
chr9	66635754	66637197	66636475	ENSG00000274181.1	+	processed_pseudogene	KNOWN	RBPJP2	1	1	-0.430307
chr9	66641314	66642277	66641795	ENSG00000276894.1	-	processed_pseudogene	KNOWN	RAB28P4	1	2	-0.430307
chr9	66721158	66722760	66721959	ENSG00000277297.1	+	processed_pseudogene	KNOWN	ATP5A1P10	1	1	-0.334273
chr9	66724584	66725064	66724824	ENSG00000273849.1	+	processed_pseudogene	KNOWN	SDR42E1P4	1	1	-0.334273
chr9	66744561	66745929	66745245	ENSG00000276457.1	-	processed_pseudogene	KNOWN	FKBP4P8	1	1	-0.219668
chr9	66856426	66932141	66894283	ENSG00000274349.4	+	protein_coding	KNOWN	ZNF658	7	7	-0.262138
chr9	66879454	66879940	66879697	ENSG00000277490.1	-	processed_pseudogene	KNOWN	RP11-1082I11.2	1	1	-0.224192
chr9	66942703	66952344	66947523	ENSG00000277350.1	+	lincRNA	KNOWN	RP11-395E19.6	2	2	-0.291455
chr9	66962271	66962348	66962309	ENSG00000276039.1	+	processed_pseudogene	KNOWN	RP11-395E19.5	1	1	-0.193165
chr9	66976520	66976991	66976755	ENSG00000274355.1	-	transcribed_processed_pseudogene	KNOWN	FAM74A3	1	1	-0.353246
chr9	66979132	66988373	66983752	ENSG00000276348.1	+	lincRNA	KNOWN	RP11-395E19.2	1	2	-0.353246
chr9	66979460	66979862	66979661	ENSG00000274820.1	+	unprocessed_pseudogene	KNOWN	RP11-395E19.4	1	1	-0.353246
chr9	66986304	66992583	66989443	ENSG00000275969.2	-	protein_coding	KNOWN	SPATA31A3	1	4	-0.139407
chr9	67059560	67293468	67176514	ENSG00000276386.1	+	unprocessed_pseudogene	KNOWN	CNTNAP3P2	1	24	-0.413087
chr9	67175775	67176035	67175905	ENSG00000274852.1	-	misc_RNA	KNOWN	RN7SL422P	1	1	-0.423597
chr9	67203635	67208072	67205853	ENSG00000277575.1	-	processed_pseudogene	KNOWN	RP11-292B8.2	1	4	-0.306926
chr9	67211663	67213067	67212365	ENSG00000273999.1	-	processed_pseudogene	KNOWN	RBM17P2	1	1	-0.438523
chr9	67328207	67329404	67328805	ENSG00000276204.1	-	processed_pseudogene	KNOWN	RP11-203I2.2	1	1	-0.409202
chr9	67512034	67515393	67513713	ENSG00000276898.1	-	lincRNA	KNOWN	RP11-118H15.1	1	2	0.003636
chr9	67697076	67697187	67697131	ENSG00000275904.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.069221
chr9	67713910	67713967	67713938	ENSG00000277208.1	+	unprocessed_pseudogene	KNOWN	RP11-12A20.11	1	1	0.205860
chr9	67714723	67714914	67714818	ENSG00000275614.1	+	unprocessed_pseudogene	KNOWN	RP11-12A20.12	1	1	0.205860
chr9	67717411	67719178	67718294	ENSG00000274026.1	-	transcribed_processed_pseudogene	KNOWN	FAM27E3	2	2	0.205860
chr9	67718821	67719022	67718921	ENSG00000278735.1	+	unprocessed_pseudogene	KNOWN	RP11-12A20.10	1	1	0.205860
chr9	67721884	67722094	67721989	ENSG00000274100.1	-	unprocessed_pseudogene	KNOWN	FAM27AP1	1	1	0.205860
chr9	67722083	67722683	67722383	ENSG00000278134.1	+	unprocessed_pseudogene	KNOWN	RP11-12A20.4	1	1	0.205860
chr9	67723736	67724105	67723920	ENSG00000276032.1	+	unprocessed_pseudogene	KNOWN	RP11-12A20.6	1	1	0.205860
chr9	67725690	67725902	67725796	ENSG00000278763.1	-	processed_pseudogene	KNOWN	FAM27B	1	1	0.205860
chr9	67725890	67726544	67726217	ENSG00000274911.1	+	unprocessed_pseudogene	KNOWN	RP11-12A20.7	1	1	0.205860
chr9	67791499	67791782	67791640	ENSG00000274098.1	-	misc_RNA	KNOWN	RN7SL787P	1	1	-0.495847
chr9	67797087	67797181	67797134	ENSG00000278010.1	+	snoRNA	NOVEL	SNORA70	1	1	-0.495847
chr9	67797221	67797500	67797360	ENSG00000277618.1	+	processed_pseudogene	KNOWN	RP11-12A20.8	1	1	-0.495847
chr9	67859147	67902094	67880620	ENSG00000260691.5	+	protein_coding	KNOWN	ANKRD20A1	7	15	-0.264101
chr9	67869947	67870053	67870000	ENSG00000278551.1	+	snRNA	KNOWN	RNU6-368P	1	1	-0.217585
chr9	67901099	67920634	67910866	ENSG00000274869.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-195B21.3	1	5	-0.521848
chr9	68228651	68229312	68228981	ENSG00000226904.1	+	antisense	KNOWN	RP11-561O23.8	1	2	0.000000
chr9	68232003	68300015	68266009	ENSG00000196873.15	+	protein_coding	KNOWN	CBWD3	19	22	-0.198595
chr9	68250469	68251656	68251062	ENSG00000279706.1	-	TEC	KNOWN	RP11-561O23.9	1	1	-0.134779
chr9	68302867	68304905	68303886	ENSG00000187559.5	+	protein_coding	KNOWN	FOXD4L3	1	1	-0.079863
chr9	68306528	68330626	68318577	ENSG00000234394.8	+	lincRNA	KNOWN	RP11-561O23.5	3	7	-0.074960
chr9	68307393	68308445	68307919	ENSG00000225337.1	+	lincRNA	KNOWN	RP11-561O23.7	1	2	-0.079863
chr9	68328308	68531061	68429684	ENSG00000154330.12	+	protein_coding	KNOWN	PGM5	7	12	-0.230789
chr9	68355189	68357852	68356520	ENSG00000224958.5	-	antisense	KNOWN	PGM5-AS1	2	3	-0.289687
chr9	68393881	68406500	68400190	ENSG00000233178.7	-	antisense	KNOWN	RP11-88I18.2	6	4	-0.431980
chr9	68426843	68429369	68428106	ENSG00000229019.1	+	sense_intronic	KNOWN	RP11-88I18.3	1	2	-0.273404
chr9	68536580	68540867	68538723	ENSG00000181778.4	-	protein_coding	KNOWN	TMEM252	1	2	-0.398334
chr9	68541036	68644442	68592739	ENSG00000226337.3	+	lincRNA	KNOWN	RP11-274B18.4	1	5	-0.253377
chr9	68543541	68546589	68545065	ENSG00000234506.5	-	lincRNA	KNOWN	LINC01506	2	4	-0.398334
chr9	68609125	68611984	68610554	ENSG00000224025.2	+	processed_pseudogene	KNOWN	RP11-274B18.3	1	1	-0.210538
chr9	68705414	69009176	68857295	ENSG00000107242.17	+	protein_coding	KNOWN	PIP5K1B	8	21	-0.284582
chr9	68780055	68784608	68782331	ENSG00000187866.7	+	protein_coding	KNOWN	FAM122A	1	1	-0.413244
chr9	68788307	68789670	68788988	ENSG00000236998.2	-	processed_pseudogene	KNOWN	RP11-203L2.3	1	2	-0.413244
chr9	68822403	68843275	68832839	ENSG00000236733.1	-	antisense	KNOWN	RP11-203L2.4	1	3	-0.300156
chr9	68935873	68935979	68935926	ENSG00000207000.1	-	snRNA	KNOWN	RNU6-820P	1	1	-0.239990
chr9	69012505	69014113	69013309	ENSG00000165059.6	-	protein_coding	KNOWN	PRKACG	1	1	-0.241135
chr9	69035259	69100178	69067718	ENSG00000165060.11	+	protein_coding	KNOWN	FXN	5	5	0.168933
chr9	69107926	69108217	69108071	ENSG00000270236.1	-	processed_pseudogene	KNOWN	RP11-265B8.5	1	1	-0.023485
chr9	69121264	69255208	69188236	ENSG00000119139.16	+	protein_coding	KNOWN	TJP2	11	23	0.066938
chr9	69296682	69306977	69301829	ENSG00000278910.3	-	lincRNA	KNOWN	BANCR	2	3	-0.140454
chr9	69324572	69392455	69358513	ENSG00000135063.17	+	protein_coding	KNOWN	FAM189A2	6	11	-0.094675
chr9	69427530	69672306	69549918	ENSG00000107282.7	-	protein_coding	KNOWN	APBA1	3	13	0.042935
chr9	69428248	69428721	69428484	ENSG00000243888.1	-	3prime_overlapping_ncrna	KNOWN	RP11-548B3.3	1	2	0.075409
chr9	69472466	69494513	69483489	ENSG00000229312.2	+	antisense	KNOWN	RP11-470P21.2	1	3	0.201155
chr9	69672749	69673713	69673231	ENSG00000261447.1	+	lincRNA	KNOWN	RP11-109D9.4	1	1	0.347721
chr9	69709522	69759959	69734740	ENSG00000188647.12	-	protein_coding	KNOWN	PTAR1	6	8	-0.210041
chr9	69818983	69820739	69819861	ENSG00000225626.2	-	lincRNA	KNOWN	C9orf135-AS1	3	2	0.007517
chr9	69820793	69906232	69863512	ENSG00000204711.8	+	protein_coding	KNOWN	C9orf135	7	6	-0.095256
chr9	69884363	69884654	69884508	ENSG00000241174.3	-	misc_RNA	KNOWN	RN7SL570P	1	1	-0.224341
chr9	70033921	70175888	70104904	ENSG00000204706.14	-	antisense	KNOWN	MAMDC2-AS1	23	9	0.146681
chr9	70043581	70226970	70135275	ENSG00000165072.9	+	protein_coding	KNOWN	MAMDC2	2	14	0.057515
chr9	70188571	70188750	70188660	ENSG00000222465.1	-	snRNA	KNOWN	RNU2-5P	1	1	-0.109642
chr9	70193997	70258866	70226431	ENSG00000268364.1	-	antisense	KNOWN	SMC5-AS1	1	4	-0.155021
chr9	70217195	70217668	70217431	ENSG00000236801.1	+	processed_pseudogene	KNOWN	RPL24P8	1	1	-0.079863
chr9	70258962	70354888	70306925	ENSG00000198887.8	+	protein_coding	KNOWN	SMC5	4	25	-0.244096
chr9	70310875	70312120	70311497	ENSG00000274421.1	+	sense_intronic	KNOWN	RP11-386J22.3	1	1	-0.369339
chr9	70311607	70311701	70311654	ENSG00000239180.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.369339
chr9	70384597	70414624	70399610	ENSG00000119138.4	-	protein_coding	KNOWN	KLF9	1	2	0.089798
chr9	70529063	71446904	70987983	ENSG00000083067.22	-	protein_coding	KNOWN	TRPM3	16	26	-0.346150
chr9	70579163	70579461	70579312	ENSG00000272232.2	-	misc_RNA	KNOWN	RN7SL726P	1	1	0.212622
chr9	70708047	70712863	70710455	ENSG00000232086.1	+	antisense	KNOWN	RP11-141J10.1	1	2	-0.395888
chr9	70726040	70730856	70728448	ENSG00000223966.1	+	antisense	KNOWN	RP11-141J10.2	1	2	-0.387682
chr9	70809957	70810087	70810022	ENSG00000207935.2	-	miRNA	KNOWN	MIR204	1	1	-0.442987
chr9	70916997	70917501	70917249	ENSG00000224437.2	-	processed_pseudogene	KNOWN	PIGUP1	1	1	-0.172771
chr9	71589601	71589933	71589767	ENSG00000229814.1	+	processed_pseudogene	KNOWN	RPL35AP21	1	1	-0.272883
chr9	71683366	71816690	71750028	ENSG00000135048.13	-	protein_coding	KNOWN	TMEM2	13	24	0.048771
chr9	71804283	71804826	71804554	ENSG00000271166.1	+	processed_pseudogene	KNOWN	RP11-409O11.3	1	1	-0.082842
chr9	71862452	71910931	71886691	ENSG00000107362.13	-	protein_coding	KNOWN	ABHD17B	2	5	-0.402258
chr9	71897213	71897646	71897429	ENSG00000281760.1	-	protein_coding	KNOWN	AL138751.1	1	2	-0.151737
chr9	71902455	71902550	71902502	ENSG00000200922.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.151737
chr9	71911510	71986054	71948782	ENSG00000155621.14	+	protein_coding	KNOWN	C9orf85	6	5	0.075659
chr9	72007881	72008136	72008008	ENSG00000236060.2	-	processed_pseudogene	KNOWN	HSPB1P1	1	1	-0.224482
chr9	72051376	72072721	72062048	ENSG00000204669.9	-	protein_coding	KNOWN	C9orf57	2	5	-0.056055
chr9	72107818	72108312	72108065	ENSG00000224820.2	-	processed_pseudogene	KNOWN	BTF3P4	1	1	-0.258107
chr9	72114595	72257193	72185894	ENSG00000119125.16	+	protein_coding	KNOWN	GDA	9	16	-0.330108
chr9	72257336	72257783	72257559	ENSG00000235523.1	+	lincRNA	KNOWN	RP11-63P12.7	1	2	-0.481743
chr9	72275453	72275973	72275713	ENSG00000233933.2	+	processed_pseudogene	KNOWN	RP11-63P12.2	1	2	-0.017419
chr9	72299720	72299838	72299779	ENSG00000252428.1	-	rRNA	KNOWN	RNA5SP285	1	1	0.076885
chr9	72305430	72343210	72324320	ENSG00000225434.2	+	lincRNA	KNOWN	LINC01504	3	5	0.157223
chr9	72351425	72365235	72358330	ENSG00000107372.12	-	protein_coding	KNOWN	ZFAND5	8	7	0.126140
chr9	72445754	72445969	72445861	ENSG00000230003.2	-	processed_pseudogene	KNOWN	RP11-217F16.1	1	1	0.357725
chr9	72470374	72471076	72470725	ENSG00000225947.1	+	processed_pseudogene	KNOWN	RP11-313E4.1	1	2	0.132181
chr9	72521801	72836351	72679076	ENSG00000165091.15	+	protein_coding	KNOWN	TMC1	6	24	0.016400
chr9	72655832	72656192	72656012	ENSG00000236862.1	-	processed_pseudogene	KNOWN	RPS20P24	1	1	-0.113757
chr9	72741152	72741617	72741384	ENSG00000229753.1	-	processed_pseudogene	KNOWN	RP11-28P17.3	1	1	-0.118575
chr9	72871728	72874109	72872918	ENSG00000236849.5	-	lincRNA	KNOWN	LINC01474	3	4	0.109803
chr9	72900662	73080442	72990552	ENSG00000165092.12	-	protein_coding	KNOWN	ALDH1A1	7	13	-0.174074
chr9	73042745	73056528	73049636	ENSG00000228024.1	+	unprocessed_pseudogene	KNOWN	CYP1D1P	1	6	-0.028783
chr9	73151757	73170393	73161075	ENSG00000135046.13	+	protein_coding	KNOWN	ANXA1	8	13	0.031255
chr9	73291120	73291227	73291173	ENSG00000221110.1	-	miRNA	NOVEL	AL449083.1	1	1	-0.409829
chr9	73474378	73476073	73475225	ENSG00000221844.2	-	processed_pseudogene	KNOWN	DPP3P2	1	1	-0.508078
chr9	73573615	73579498	73576556	ENSG00000232590.1	+	lincRNA	KNOWN	RP11-128I7.1	1	3	-0.822278
chr9	73648828	73649839	73649333	ENSG00000236701.3	+	processed_pseudogene	KNOWN	RP11-549A6.1	1	1	-0.410509
chr9	73750972	73751077	73751024	ENSG00000212454.1	-	rRNA	KNOWN	RNA5SP286	1	1	-0.480147
chr9	73870896	73873297	73872096	ENSG00000223368.2	-	processed_pseudogene	KNOWN	RP11-401G5.1	1	3	-0.717486
chr9	74371531	74383530	74377530	ENSG00000227809.1	+	lincRNA	KNOWN	RP11-171A24.2	1	3	-0.450326
chr9	74485551	74499127	74492339	ENSG00000224825.2	-	antisense	KNOWN	RORB-AS1	1	3	-0.540313
chr9	74497365	74693177	74595271	ENSG00000198963.10	+	protein_coding	KNOWN	RORB	2	10	-0.511554
chr9	74722495	74888094	74805294	ENSG00000119121.21	-	protein_coding	KNOWN	TRPM6	5	39	-0.301298
chr9	74799895	74800222	74800058	ENSG00000202217.1	+	misc_RNA	KNOWN	RN7SKP47	1	1	-0.371409
chr9	74804473	74804773	74804623	ENSG00000270954.1	+	processed_pseudogene	KNOWN	RPSAP75	1	1	-0.371409
chr9	74847506	74847601	74847553	ENSG00000281621.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.246177
chr9	74857675	74857781	74857728	ENSG00000252758.1	+	snRNA	KNOWN	RNU6-445P	1	1	-0.413744
chr9	74935176	74935696	74935436	ENSG00000224297.2	+	processed_pseudogene	KNOWN	RP11-197P3.1	1	1	-0.092433
chr9	74946581	74952886	74949733	ENSG00000135045.6	-	protein_coding	KNOWN	C9orf40	1	2	-0.136001
chr9	74952968	74996293	74974630	ENSG00000203321.2	+	antisense	KNOWN	C9orf41-AS1	1	5	-0.230089
chr9	74981020	75028423	75004721	ENSG00000156017.12	-	protein_coding	KNOWN	CARNMT1	3	8	-0.209632
chr9	75009828	75016036	75012932	ENSG00000229587.2	-	sense_intronic	KNOWN	RP11-197P3.5	1	2	-0.342600
chr9	75016681	75016848	75016764	ENSG00000278040.1	-	misc_RNA	NOVEL	uc_338	1	1	-0.351615
chr9	75060573	75088217	75074395	ENSG00000106733.20	-	protein_coding	KNOWN	NMRK1	7	10	-0.091409
chr9	75088543	75147265	75117904	ENSG00000134996.11	+	protein_coding	KNOWN	OSTF1	1	10	-0.009488
chr9	75181520	75181621	75181570	ENSG00000200041.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.288913
chr9	75198071	75198177	75198124	ENSG00000212316.1	+	snRNA	KNOWN	RNU6-1228P	1	1	-0.186984
chr9	75401889	75402992	75402440	ENSG00000235707.2	-	processed_pseudogene	KNOWN	RP11-323A7.1	1	1	-0.635636
chr9	75579669	75588548	75584108	ENSG00000236376.1	+	lincRNA	KNOWN	RP11-470F18.1	1	2	-0.360975
chr9	75723745	75723830	75723787	ENSG00000280790.1	-	miRNA	NOVEL	AL157883.1	1	1	-0.496752
chr9	75724222	75724575	75724398	ENSG00000234644.2	-	processed_pseudogene	KNOWN	OTX2P1	1	1	-0.496752
chr9	75890644	76362339	76126491	ENSG00000099139.13	+	protein_coding	KNOWN	PCSK5	5	37	-0.333201
chr9	75912453	75912549	75912501	ENSG00000238826.1	+	miRNA	NOVEL	AL359253.1	1	1	-0.381078
chr9	76286494	76288081	76287287	ENSG00000231137.1	-	processed_pseudogene	KNOWN	RBM22P5	1	2	-0.342636
chr9	76385517	76394517	76390017	ENSG00000135002.11	-	protein_coding	KNOWN	RFK	6	5	0.082041
chr9	76398699	76399586	76399142	ENSG00000234618.1	+	processed_pseudogene	KNOWN	RPSAP9	1	1	0.007103
chr9	76419850	76507416	76463633	ENSG00000187210.12	+	protein_coding	KNOWN	GCNT1	5	4	0.127795
chr9	76419934	76420631	76420282	ENSG00000233814.1	+	processed_pseudogene	KNOWN	RP11-66C24.1	1	2	0.100657
chr9	76549282	76549771	76549526	ENSG00000219149.4	-	processed_pseudogene	KNOWN	RP11-214N16.2	1	1	0.084338
chr9	76571815	76571871	76571843	ENSG00000241781.2	+	miRNA	NOVEL	AL161626.1	1	1	0.136615
chr9	76611376	76906087	76758731	ENSG00000106772.17	-	protein_coding	KNOWN	PRUNE2	15	19	-0.139938
chr9	76666086	76666171	76666128	ENSG00000265488.1	+	miRNA	NOVEL	AL359314.1	1	1	-0.151737
chr9	76764436	76787569	76776002	ENSG00000225937.1	+	antisense	KNOWN	PCA3	1	4	0.020711
chr9	76779657	76779917	76779787	ENSG00000274326.1	+	misc_RNA	NOVEL	PCA3_1	1	1	0.042239
chr9	76785782	76786190	76785986	ENSG00000277320.1	+	misc_RNA	NOVEL	PCA3_2	1	1	0.042239
chr9	76931261	76932066	76931663	ENSG00000230335.1	-	processed_pseudogene	KNOWN	DNAJB5P1	1	1	-0.181332
chr9	76970322	76971028	76970675	ENSG00000236604.1	+	processed_pseudogene	KNOWN	LYPLA2P3	1	2	-0.110825
chr9	76992099	76993108	76992603	ENSG00000229857.1	+	processed_pseudogene	KNOWN	RP11-159H20.3	1	2	-0.063659
chr9	77019655	77020953	77020304	ENSG00000204612.1	+	protein_coding	KNOWN	FOXB2	1	1	0.123186
chr9	77040416	77040673	77040544	ENSG00000232851.3	+	processed_pseudogene	KNOWN	ATP5J2P3	1	1	-0.219952
chr9	77072100	77073295	77072697	ENSG00000233526.1	+	processed_pseudogene	KNOWN	RFC5P1	1	2	-0.422581
chr9	77176756	77177994	77177375	ENSG00000232998.1	-	antisense	KNOWN	VPS13A-AS1	1	2	0.149873
chr9	77177353	77421541	77299447	ENSG00000197969.11	+	protein_coding	KNOWN	VPS13A	13	72	-0.118763
chr9	77423079	77648307	77535693	ENSG00000156049.6	-	protein_coding	KNOWN	GNA14	2	7	-0.022886
chr9	77456295	77526697	77491496	ENSG00000231373.1	+	antisense	KNOWN	GNA14-AS1	1	4	-0.038413
chr9	77580245	77580628	77580436	ENSG00000228248.1	+	processed_pseudogene	KNOWN	NUTF2P3	1	1	0.125350
chr9	77635203	77635309	77635256	ENSG00000201711.1	-	snRNA	KNOWN	RNU6-1303P	1	1	-0.155936
chr9	77716087	78031458	77873772	ENSG00000156052.10	-	protein_coding	KNOWN	GNAQ	2	7	0.053727
chr9	78150532	78151193	78150862	ENSG00000233457.1	-	processed_pseudogene	KNOWN	RP11-336N8.1	1	1	-0.301672
chr9	78165465	78165778	78165621	ENSG00000222452.1	+	misc_RNA	KNOWN	RN7SKP59	1	1	-0.301672
chr9	78178263	78179512	78178887	ENSG00000233947.1	+	processed_pseudogene	KNOWN	RP11-336N8.2	1	1	-0.245449
chr9	78180214	78180693	78180453	ENSG00000228781.1	-	processed_pseudogene	KNOWN	RP11-336N8.3	1	1	-0.245449
chr9	78219120	78219357	78219238	ENSG00000234819.1	+	processed_pseudogene	KNOWN	RP11-336N8.4	1	1	0.156481
chr9	78236062	78279690	78257876	ENSG00000148019.12	+	protein_coding	KNOWN	CEP78	11	17	-0.064309
chr9	78297143	78330093	78313618	ENSG00000135069.13	+	protein_coding	KNOWN	PSAT1	2	9	0.421096
chr9	78589158	78589539	78589348	ENSG00000270627.1	+	processed_pseudogene	KNOWN	RP11-216F5.1	1	1	0.069390
chr9	78741720	78742744	78742232	ENSG00000237257.1	-	unprocessed_pseudogene	KNOWN	MTND2P8	1	1	-0.337873
chr9	79036413	79037568	79036990	ENSG00000226234.2	-	processed_pseudogene	KNOWN	KRT18P24	1	1	0.060628
chr9	79135422	79145674	79140548	ENSG00000260995.1	-	lincRNA	KNOWN	RP11-165H23.1	1	5	0.178032
chr9	79391304	79391759	79391531	ENSG00000186940.6	+	processed_pseudogene	KNOWN	CHCHD2P9	1	1	-0.195989
chr9	79505804	79532342	79519073	ENSG00000233086.7	-	lincRNA	KNOWN	RP11-375O18.2	4	3	-0.048167
chr9	79571773	79726882	79649327	ENSG00000106829.18	+	protein_coding	KNOWN	TLE4	28	21	0.010843
chr9	79726069	79726321	79726195	ENSG00000240979.1	+	processed_pseudogene	KNOWN	RP11-79D8.2	1	1	0.114360
chr9	79850871	79851498	79851184	ENSG00000270691.1	+	processed_pseudogene	KNOWN	RP11-403N16.5	1	1	-0.391885
chr9	79863019	79866875	79864947	ENSG00000238002.2	+	processed_pseudogene	KNOWN	NPAP1P6	1	2	-0.391885
chr9	79874696	79886678	79880687	ENSG00000232494.1	-	lincRNA	KNOWN	RP11-403N16.2	1	2	-0.533160
chr9	79889001	79892007	79890504	ENSG00000260564.1	+	lincRNA	KNOWN	RP11-403N16.3	1	1	-0.413093
chr9	79913269	79915736	79914502	ENSG00000279715.1	+	TEC	KNOWN	RP11-403N16.4	1	1	-0.344648
chr9	79975023	79990064	79982543	ENSG00000280366.1	+	lincRNA	KNOWN	RP11-327L9.1	1	3	-0.344014
chr9	80030579	80034555	80032567	ENSG00000230945.1	+	lincRNA	KNOWN	LINC01507	1	2	-0.594850
chr9	80357029	80360338	80358683	ENSG00000236521.1	-	processed_pseudogene	KNOWN	NPAP1P4	1	1	-0.297660
chr9	80396890	80396964	80396927	ENSG00000275603.1	-	miRNA	NOVEL	AL390788.1	1	1	-0.892411
chr9	80563571	80564630	80564100	ENSG00000232981.1	-	unprocessed_pseudogene	KNOWN	RP11-117O7.2	1	1	-0.451630
chr9	80565032	80565962	80565497	ENSG00000225901.1	-	unprocessed_pseudogene	KNOWN	MTND2P9	1	1	-0.451630
chr9	80734242	80734329	80734285	ENSG00000221581.1	-	miRNA	NOVEL	AL353707.1	1	1	-0.335119
chr9	80782338	80782770	80782554	ENSG00000234637.1	-	processed_pseudogene	KNOWN	RPS19P6	1	1	-0.347293
chr9	80869758	80871295	80870526	ENSG00000226798.1	-	lincRNA	KNOWN	RP11-289F5.1	1	3	-0.708017
chr9	81009486	81009553	81009519	ENSG00000280565.1	-	miRNA	NOVEL	AL354682.1	1	1	-0.820545
chr9	81410279	81410630	81410454	ENSG00000228375.1	+	processed_pseudogene	KNOWN	RPS20P25	1	1	-0.259481
chr9	81488308	81488837	81488572	ENSG00000237072.1	+	processed_pseudogene	KNOWN	RP11-232A1.2	1	1	-0.145587
chr9	81583683	81689305	81636494	ENSG00000196781.13	-	protein_coding	KNOWN	TLE1	7	22	0.112775
chr9	81689713	81776900	81733306	ENSG00000233926.1	+	lincRNA	KNOWN	RP11-154D17.1	2	4	0.111444
chr9	81725243	81725349	81725296	ENSG00000207206.1	-	snRNA	KNOWN	RNU6-1035P	1	1	0.120561
chr9	81805996	81806081	81806038	ENSG00000263404.1	-	miRNA	NOVEL	AL158154.1	1	1	0.066152
chr9	81885496	81885598	81885547	ENSG00000252167.1	+	rRNA	KNOWN	RNA5SP287	1	1	-0.104073
chr9	81887673	81887764	81887718	ENSG00000278507.1	+	miRNA	NOVEL	AL158154.2	1	1	-0.104073
chr9	81888918	81888985	81888951	ENSG00000200969.1	+	snoRNA	NOVEL	SNORD95	1	1	-0.104073
chr9	81913437	81919926	81916681	ENSG00000240632.6	+	transcribed_unprocessed_pseudogene	KNOWN	SPATA31D5P	2	4	-0.219668
chr9	81928021	81931368	81929694	ENSG00000230846.1	-	lincRNA	KNOWN	RP11-383M4.2	1	2	-0.075250
chr9	81928514	81934948	81931731	ENSG00000189357.8	+	protein_coding	KNOWN	SPATA31D4	1	4	0.051919
chr9	81930226	81977089	81953657	ENSG00000267559.5	-	lincRNA	KNOWN	RP11-383M4.6	2	5	-0.041619
chr9	81943500	81995251	81969375	ENSG00000186788.12	+	protein_coding	KNOWN	SPATA31D3	2	5	-0.167280
chr9	81966564	81972130	81969347	ENSG00000237770.2	+	unprocessed_pseudogene	KNOWN	SPATA31D2P	1	3	-0.177217
chr9	81988772	81995256	81992014	ENSG00000214929.3	+	protein_coding	KNOWN	SPATA31D1	2	4	-0.370198
chr9	82057647	82063682	82060664	ENSG00000231649.3	-	unprocessed_pseudogene	KNOWN	SPATA31B1P	1	4	-0.098439
chr9	82086155	82088768	82087461	ENSG00000230360.1	-	processed_pseudogene	KNOWN	DDX10P2	1	1	-0.131841
chr9	82130752	82131632	82131192	ENSG00000235377.1	+	processed_pseudogene	KNOWN	RP11-388B24.4	1	1	-0.276547
chr9	82272756	82564432	82418594	ENSG00000228430.8	+	lincRNA	KNOWN	RP11-15B24.5	17	8	-0.337358
chr9	82405188	82406239	82405713	ENSG00000225085.1	+	lincRNA	KNOWN	RP11-15B24.1	1	2	-0.299199
chr9	82427350	82428025	82427687	ENSG00000228046.2	-	processed_pseudogene	KNOWN	RP11-15B24.2	1	1	-0.325928
chr9	82431889	82432905	82432397	ENSG00000228123.4	-	processed_pseudogene	KNOWN	RP11-15B24.3	1	1	-0.307616
chr9	82451656	82455225	82453440	ENSG00000232749.2	+	lincRNA	KNOWN	RP11-15B24.4	1	4	-0.234112
chr9	82543718	82544196	82543957	ENSG00000278988.1	+	TEC	KNOWN	RP11-333B6.1	1	1	-0.470741
chr9	82705777	82705844	82705810	ENSG00000275270.1	+	miRNA	NOVEL	AL133391.1	1	1	-0.300326
chr9	82744067	82744792	82744429	ENSG00000233309.1	-	processed_pseudogene	KNOWN	RPS6P12	1	1	-0.625770
chr9	82979585	83063177	83021381	ENSG00000165105.9	-	protein_coding	KNOWN	RASEF	2	17	-0.321967
chr9	83200940	83201228	83201084	ENSG00000251776.1	-	misc_RNA	KNOWN	RN7SKP242	1	1	0.110488
chr9	83201957	83202065	83202011	ENSG00000273806.1	+	processed_pseudogene	KNOWN	RP11-439K3.4	1	1	0.110488
chr9	83219331	83234242	83226786	ENSG00000229109.1	+	antisense	KNOWN	RP11-439K3.1	1	3	-0.029572
chr9	83242990	83538546	83390768	ENSG00000172159.15	-	protein_coding	KNOWN	FRMD3	7	15	-0.133275
chr9	83275941	83276114	83276027	ENSG00000251752.1	+	snRNA	KNOWN	RNU4-29P	1	1	-0.239459
chr9	83276376	83279499	83277937	ENSG00000237529.1	+	antisense	KNOWN	RP11-439K3.3	1	2	-0.239459
chr9	83596444	83596584	83596514	ENSG00000199483.1	-	snRNA	KNOWN	RNU4-15P	1	1	-0.328584
chr9	83623049	83644130	83633589	ENSG00000148057.15	+	protein_coding	KNOWN	IDNK	6	6	-0.024707
chr9	83659963	83708203	83684083	ENSG00000135018.13	-	protein_coding	KNOWN	UBQLN1	6	11	0.000193
chr9	83707594	83713378	83710486	ENSG00000254473.1	+	antisense	KNOWN	RP11-522I20.3	2	2	0.040130
chr9	83739421	83829516	83784468	ENSG00000165113.12	-	protein_coding	KNOWN	GKAP1	7	13	-0.308215
chr9	83829656	83837861	83833758	ENSG00000226877.7	+	antisense	KNOWN	RP11-575L7.2	4	5	-0.021616
chr9	83831586	83868532	83850059	ENSG00000231616.8	+	antisense	KNOWN	RP11-575L7.4	14	8	-0.061640
chr9	83836698	83921465	83879081	ENSG00000165115.14	-	protein_coding	KNOWN	KIF27	5	18	-0.086154
chr9	83938311	83956986	83947648	ENSG00000165118.14	-	protein_coding	KNOWN	C9orf64	3	5	0.218182
chr9	83968083	83980616	83974349	ENSG00000165119.18	-	protein_coding	KNOWN	HNRNPK	11	17	0.618397
chr9	83969748	83969857	83969802	ENSG00000207603.1	-	miRNA	KNOWN	MIR7-1	1	1	0.136386
chr9	83972233	83975777	83974005	ENSG00000235298.1	+	antisense	KNOWN	RP11-575L7.8	1	2	0.705383
chr9	83980711	84004074	83992392	ENSG00000178966.15	+	protein_coding	KNOWN	RMI1	3	4	0.391940
chr9	83992932	83993033	83992982	ENSG00000202523.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.185101
chr9	84063443	84094577	84079010	ENSG00000227463.2	+	lincRNA	KNOWN	RP11-158D2.2	1	9	0.002448
chr9	84078584	84078857	84078720	ENSG00000270166.1	+	processed_pseudogene	KNOWN	RP11-158D2.1	1	1	0.028566
chr9	84275457	84340683	84308070	ENSG00000197506.7	-	protein_coding	KNOWN	SLC28A3	2	18	-0.089316
chr9	84278219	84290131	84284175	ENSG00000233262.1	+	antisense	KNOWN	RP11-380F14.2	1	2	-0.293964
chr9	84604111	84604425	84604268	ENSG00000228095.3	-	processed_pseudogene	KNOWN	RP11-361M4.1	1	1	-0.353952
chr9	84668551	85027070	84847810	ENSG00000148053.15	+	protein_coding	KNOWN	NTRK2	8	21	-0.202406
chr9	85159682	85159950	85159816	ENSG00000226590.1	+	processed_pseudogene	KNOWN	UBE2V1P10	1	1	-0.171043
chr9	85492579	85494094	85493336	ENSG00000227412.1	+	processed_pseudogene	KNOWN	STK33P1	1	2	-0.123986
chr9	85546539	85742029	85644284	ENSG00000135049.15	-	protein_coding	KNOWN	AGTPBP1	8	26	-0.295060
chr9	85668963	85669039	85669001	ENSG00000216181.2	-	miRNA	NOVEL	AL157882.1	1	1	-0.229936
chr9	85753306	85786575	85769940	ENSG00000234424.2	+	unprocessed_pseudogene	KNOWN	RP11-213G2.1	1	7	-0.218015
chr9	85756042	85765112	85760577	ENSG00000229454.1	-	lincRNA	KNOWN	RP11-202I11.2	1	3	-0.140299
chr9	85785722	85793480	85789601	ENSG00000230303.5	-	lincRNA	KNOWN	RP11-213G2.2	4	5	-0.397104
chr9	85815966	85849511	85832738	ENSG00000165121.10	+	unprocessed_pseudogene	KNOWN	RP11-213G2.3	1	9	-0.247990
chr9	85898903	85899716	85899309	ENSG00000213711.3	+	processed_pseudogene	KNOWN	PHBP7	1	1	-0.270578
chr9	85934588	85936599	85935593	ENSG00000231741.2	+	processed_pseudogene	KNOWN	RP11-213G2.5	1	3	-0.421417
chr9	85941146	86022298	85981722	ENSG00000135040.15	+	protein_coding	KNOWN	NAA35	3	23	-0.253206
chr9	86026146	86100173	86063159	ENSG00000135052.16	-	protein_coding	KNOWN	GOLM1	8	10	-0.004403
chr9	86132622	86132851	86132736	ENSG00000233713.2	+	processed_pseudogene	KNOWN	RP11-379P1.4	1	1	0.049431
chr9	86220265	86259657	86239961	ENSG00000187753.12	-	protein_coding	KNOWN	C9orf153	5	4	-0.033806
chr9	86228815	86228983	86228899	ENSG00000270688.1	+	processed_pseudogene	KNOWN	RP11-507D14.4	1	1	-0.040112
chr9	86258358	86258646	86258502	ENSG00000223012.1	-	misc_RNA	KNOWN	RN7SKP264	1	1	0.038880
chr9	86264546	86282538	86273542	ENSG00000135070.13	-	protein_coding	KNOWN	ISCA1	3	4	-0.012069
chr9	86287733	86354454	86321093	ENSG00000083223.17	-	protein_coding	KNOWN	ZCCHC6	7	28	0.061768
chr9	86374966	86375706	86375336	ENSG00000214908.3	-	processed_pseudogene	KNOWN	RP11-229M1.2	1	1	-0.076937
chr9	86414282	86414570	86414426	ENSG00000235819.1	+	lincRNA	KNOWN	RP11-359J6.1	1	2	0.040766
chr9	86422938	86423128	86423033	ENSG00000222293.1	-	snRNA	KNOWN	RNU2-36P	1	1	0.040766
chr9	86632147	86696496	86664321	ENSG00000232211.1	+	lincRNA	KNOWN	RP11-395D3.1	1	3	0.228122
chr9	86944363	86947189	86945776	ENSG00000180447.6	-	protein_coding	KNOWN	GAS1	1	1	-0.121839
chr9	86948699	87002033	86975366	ENSG00000226237.1	+	lincRNA	KNOWN	RP11-276H19.1	1	7	0.049842
chr9	87008455	87042126	87025290	ENSG00000269994.1	-	lincRNA	KNOWN	RP11-276H19.2	1	2	-0.114912
chr9	87011652	87013151	87012401	ENSG00000231007.5	+	processed_pseudogene	KNOWN	CDC20P1	1	1	-0.089615
chr9	87084161	87085151	87084656	ENSG00000224887.1	-	processed_pseudogene	KNOWN	RP11-276H19.4	1	1	0.273512
chr9	87113940	87114027	87113983	ENSG00000276743.1	-	miRNA	NOVEL	AL513318.1	1	1	0.350594
chr9	87148644	87159556	87154100	ENSG00000204446.4	+	lincRNA	KNOWN	C9orf170	1	2	0.196859
chr9	87260450	87260585	87260517	ENSG00000212421.1	+	snoRNA	NOVEL	SNORA26	1	1	0.091992
chr9	87423634	87423893	87423763	ENSG00000228373.2	+	processed_pseudogene	KNOWN	RP11-497K15.1	1	1	0.060628
chr9	87497228	87708633	87602930	ENSG00000196730.12	+	protein_coding	KNOWN	DAPK1	19	26	0.136391
chr9	87525302	87525475	87525388	ENSG00000219928.2	+	processed_pseudogene	KNOWN	RP11-40C6.2	1	1	0.084043
chr9	87553454	87554459	87553956	ENSG00000236709.1	+	sense_intronic	KNOWN	DAPK1-IT1	1	2	0.151188
chr9	87725519	87731393	87728456	ENSG00000135047.14	+	protein_coding	KNOWN	CTSL	6	8	0.316084
chr9	87741233	87741953	87741593	ENSG00000237747.1	+	processed_pseudogene	KNOWN	RP11-65B23.3	1	1	-0.058425
chr9	87744901	87744993	87744947	ENSG00000222408.1	-	miRNA	NOVEL	AL160279.1	1	1	-0.058425
chr9	87772453	87786884	87779668	ENSG00000188029.8	+	transcribed_unprocessed_pseudogene	KNOWN	CTSL3P	2	5	0.027861
chr9	87799501	87821803	87810652	ENSG00000276478.1	-	unprocessed_pseudogene	KNOWN	RP11-65B23.5	1	4	0.100349
chr9	87810642	87837225	87823933	ENSG00000237743.3	-	transcribed_unprocessed_pseudogene	KNOWN	FBP2P1	2	4	0.128926
chr9	87816465	87817970	87817217	ENSG00000232743.2	+	processed_pseudogene	KNOWN	XXyac-YM21GA2.1	1	1	-0.004471
chr9	87825146	87825968	87825557	ENSG00000277357.1	+	processed_pseudogene	KNOWN	NPAP1P7	1	1	-0.004471
chr9	87844152	87847314	87845733	ENSG00000234575.1	+	unprocessed_pseudogene	KNOWN	CTSLP8	1	7	0.486271
chr9	87848113	87853442	87850777	ENSG00000233884.1	-	antisense	KNOWN	XXyac-YM21GA2.3	1	4	0.245836
chr9	87857015	87859399	87858207	ENSG00000214888.2	-	antisense	KNOWN	XXyac-YM21GA2.7	1	2	0.114131
chr9	87864166	87866290	87865228	ENSG00000234460.1	+	lincRNA	KNOWN	XXyac-YM21GA2.4	1	2	0.114131
chr9	87882826	87888899	87885862	ENSG00000177992.9	+	protein_coding	KNOWN	SPATA31E1	1	4	0.292689
chr9	87914493	87923505	87918999	ENSG00000230246.7	+	transcribed_unprocessed_pseudogene	KNOWN	SPATA31C1	2	6	-0.330699
chr9	87944276	87945023	87944649	ENSG00000238110.1	-	processed_pseudogene	KNOWN	RP11-350E12.5	1	1	0.187808
chr9	87966441	87974753	87970597	ENSG00000156345.17	-	protein_coding	KNOWN	CDK20	10	8	0.165316
chr9	87998229	87998335	87998282	ENSG00000271923.1	-	snRNA	KNOWN	RNU6-86P	1	1	0.037199
chr9	88016300	88016793	88016546	ENSG00000217716.3	+	processed_pseudogene	KNOWN	RPS10P3	1	1	0.057016
chr9	88066915	88068037	88067476	ENSG00000225385.3	+	processed_pseudogene	KNOWN	RP11-350E12.4	1	3	0.060965
chr9	88129458	88138446	88133952	ENSG00000177910.7	-	unprocessed_pseudogene	KNOWN	SPATA31C2	1	5	0.246242
chr9	88144851	88145850	88145350	ENSG00000276535.1	-	processed_pseudogene	KNOWN	RP11-345K9.3	1	1	0.274195
chr9	88177695	88178578	88178136	ENSG00000279154.1	+	TEC	KNOWN	RP11-345K9.2	1	1	0.091992
chr9	88180673	88181447	88181060	ENSG00000204429.4	+	processed_pseudogene	KNOWN	RP11-1E11.1	1	1	0.091992
chr9	88187735	88190202	88188968	ENSG00000229288.1	-	processed_pseudogene	KNOWN	RP11-1E11.2	1	3	0.085432
chr9	88324454	88325339	88324896	ENSG00000226327.3	+	processed_pseudogene	KNOWN	RPSAP49	1	1	0.295320
chr9	88388419	88478694	88433556	ENSG00000106723.16	+	protein_coding	KNOWN	SPIN1	6	9	0.175347
chr9	88391362	88391832	88391597	ENSG00000275017.1	-	processed_pseudogene	KNOWN	RP11-317B17.4	1	1	0.003455
chr9	88410529	88411463	88410996	ENSG00000227638.2	-	processed_pseudogene	KNOWN	HNRNPA1P14	1	1	0.296812
chr9	88484852	88485325	88485088	ENSG00000231804.1	-	processed_pseudogene	KNOWN	RP11-317B17.3	1	1	0.248582
chr9	88535101	88584274	88559687	ENSG00000130045.15	+	protein_coding	KNOWN	NXNL2	5	3	0.293236
chr9	88627189	88652160	88639674	ENSG00000228189.4	-	lincRNA	KNOWN	RP13-60M5.2	2	4	0.014343
chr9	88745836	88745905	88745870	ENSG00000265873.1	-	miRNA	KNOWN	MIR4289	1	1	0.193687
chr9	88970887	88971341	88971114	ENSG00000225856.2	-	processed_pseudogene	KNOWN	PCNPP2	1	1	0.288849
chr9	88971638	88976298	88973968	ENSG00000228658.1	+	lincRNA	KNOWN	RP11-791O21.5	1	2	0.288849
chr9	88990863	88996140	88993501	ENSG00000186354.10	+	protein_coding	KNOWN	C9orf47	3	3	0.449948
chr9	88991447	89005010	88998228	ENSG00000213694.3	+	protein_coding	KNOWN	S1PR3	2	2	0.449948
chr9	89005771	89178767	89092269	ENSG00000148082.9	-	protein_coding	KNOWN	SHC3	2	12	0.053783
chr9	89088604	89109934	89099269	ENSG00000224945.1	-	sense_intronic	KNOWN	RP11-82L18.2	2	3	-0.063241
chr9	89311198	89316703	89313950	ENSG00000123975.4	+	protein_coding	KNOWN	CKS2	1	3	-0.064599
chr9	89312225	89312306	89312265	ENSG00000265112.1	+	miRNA	KNOWN	MIR3153	1	1	-0.064599
chr9	89318506	89359662	89339084	ENSG00000187742.14	+	protein_coding	KNOWN	SECISBP2	9	17	-0.001709
chr9	89360787	89498130	89429458	ENSG00000187764.11	-	protein_coding	KNOWN	SEMA4D	24	20	0.190346
chr9	89449558	89450754	89450156	ENSG00000231799.2	+	processed_pseudogene	KNOWN	RP13-93L13.2	1	1	0.001737
chr9	89472237	89472692	89472464	ENSG00000225460.1	+	processed_pseudogene	KNOWN	RP13-93L13.1	1	1	0.107340
chr9	89497938	89498021	89497979	ENSG00000264913.1	+	miRNA	NOVEL	AL590233.1	1	1	0.083275
chr9	89605013	89606555	89605784	ENSG00000130222.10	+	protein_coding	KNOWN	GADD45G	3	4	-0.064734
chr9	89639814	89719759	89679786	ENSG00000237372.2	+	lincRNA	KNOWN	UNQ6494	2	6	0.057951
chr9	89799695	89821753	89810724	ENSG00000226206.1	+	lincRNA	KNOWN	RP5-1050E16.2	1	3	-0.085813
chr9	89801727	89803061	89802394	ENSG00000236507.1	-	lincRNA	KNOWN	RP5-1050E16.1	1	2	0.076644
chr9	89978282	89987486	89982884	ENSG00000237626.1	+	lincRNA	KNOWN	RP11-406A20.1	1	2	-0.231797
chr9	90020654	90041499	90031076	ENSG00000227555.1	-	lincRNA	KNOWN	MIR4290HG	1	4	-0.109741
chr9	90023441	90023535	90023488	ENSG00000263967.1	-	miRNA	KNOWN	MIR4290	1	1	-0.115521
chr9	90081297	90082569	90081933	ENSG00000234910.2	-	processed_pseudogene	KNOWN	IL6RP1	1	1	-0.369456
chr9	90108244	90108518	90108381	ENSG00000278382.1	+	processed_pseudogene	KNOWN	RP11-406A20.5	1	1	-0.201999
chr9	90158028	90158646	90158337	ENSG00000279503.1	+	TEC	KNOWN	RP11-30P16.1	1	1	-0.328340
chr9	90216039	90216924	90216481	ENSG00000185074.7	+	unprocessed_pseudogene	KNOWN	OR7E31P	1	1	-0.453244
chr9	90232185	90233141	90232663	ENSG00000225072.1	+	unprocessed_pseudogene	KNOWN	OR7E116P	1	1	-0.194312
chr9	90300902	90433505	90367203	ENSG00000231107.1	-	lincRNA	KNOWN	LINC01508	2	3	-0.337441
chr9	90463524	90582744	90523134	ENSG00000229613.1	-	lincRNA	KNOWN	LINC01501	3	6	-0.366773
chr9	90609832	90643104	90626468	ENSG00000165023.5	-	protein_coding	KNOWN	DIRAS2	1	2	-0.249862
chr9	90742526	90743380	90742953	ENSG00000236316.2	-	unprocessed_pseudogene	KNOWN	OR7E109P	1	1	-0.439283
chr9	90751240	90752230	90751735	ENSG00000270432.1	-	unprocessed_pseudogene	KNOWN	OR7E108P	1	1	-0.000037
chr9	90801787	90898549	90850168	ENSG00000165025.14	+	protein_coding	KNOWN	SYK	5	14	-0.094641
chr9	90957260	90965393	90961326	ENSG00000228216.1	-	lincRNA	KNOWN	RP11-367F23.1	1	2	-0.106337
chr9	90997054	91001871	90999462	ENSG00000260454.1	+	lincRNA	KNOWN	RP11-367F23.2	1	3	0.101390
chr9	91104957	91107304	91106130	ENSG00000230537.1	-	lincRNA	KNOWN	RP11-305L7.1	1	3	0.322162
chr9	91119062	91182762	91150912	ENSG00000229694.6	+	lincRNA	KNOWN	RP11-305L7.6	4	4	0.192990
chr9	91119138	91163087	91141112	ENSG00000237422.1	-	lincRNA	KNOWN	RP11-305L7.3	1	2	0.115166
chr9	91159573	91165658	91162615	ENSG00000235641.4	+	lincRNA	KNOWN	LINC00484	4	2	0.266866
chr9	91169585	91170045	91169815	ENSG00000230147.2	-	processed_pseudogene	KNOWN	RP11-305L7.5	1	1	0.282257
chr9	91206175	91210299	91208237	ENSG00000273381.1	-	lincRNA	KNOWN	RP11-305L7.7	1	1	0.397928
chr9	91213815	91361913	91287864	ENSG00000148090.11	-	protein_coding	KNOWN	AUH	5	10	0.035526
chr9	91409045	91423862	91416453	ENSG00000165030.3	-	protein_coding	KNOWN	NFIL3	1	2	0.278557
chr9	91426238	91427144	91426691	ENSG00000233081.1	+	lincRNA	KNOWN	RP11-440G5.2	1	2	0.304653
chr9	91563091	91950162	91756626	ENSG00000169071.14	-	protein_coding	KNOWN	ROR2	8	13	0.001822
chr9	91611343	91612492	91611917	ENSG00000228595.1	+	processed_pseudogene	KNOWN	PAICSP2	1	1	-0.331038
chr9	91636251	91636361	91636306	ENSG00000266855.1	+	miRNA	KNOWN	MIR3910-1	1	1	-0.167875
chr9	92006062	92006544	92006303	ENSG00000227399.1	+	processed_pseudogene	KNOWN	RP11-118F2.2	1	1	0.214849
chr9	92027498	92027824	92027661	ENSG00000237306.1	+	processed_pseudogene	KNOWN	HSPE1P22	1	1	-0.138014
chr9	92031999	92115384	92073691	ENSG00000090054.13	-	protein_coding	KNOWN	SPTLC1	7	15	-0.015919
chr9	92104425	92105451	92104938	ENSG00000275756.1	+	processed_pseudogene	KNOWN	RP11-100G15.12	1	1	-0.064978
chr9	92108858	92108989	92108923	ENSG00000232179.1	+	unprocessed_pseudogene	KNOWN	RP11-100G15.2	1	1	-0.064978
chr9	92109013	92110095	92109554	ENSG00000228069.1	+	unprocessed_pseudogene	KNOWN	RP11-100G15.3	1	2	-0.033766
chr9	92110168	92110514	92110341	ENSG00000238288.1	+	unprocessed_pseudogene	KNOWN	RP11-100G15.4	1	1	0.286808
chr9	92110575	92110868	92110721	ENSG00000240791.1	+	unprocessed_pseudogene	KNOWN	MTND4LP7	1	1	0.286808
chr9	92110865	92111897	92111381	ENSG00000227321.2	+	unprocessed_pseudogene	KNOWN	MTND4P15	1	1	0.286808
chr9	92132398	92138629	92135513	ENSG00000234537.1	+	unprocessed_pseudogene	KNOWN	RP11-100G15.7	1	16	0.604198
chr9	92141298	92160114	92150706	ENSG00000225511.6	+	lincRNA	KNOWN	LINC00475	8	6	0.759456
chr9	92150382	92157445	92153913	ENSG00000236717.2	-	lincRNA	KNOWN	RP11-100G15.10	1	2	0.893011
chr9	92171241	92173494	92172367	ENSG00000224809.2	+	processed_pseudogene	KNOWN	BEND3P2	1	1	0.522883
chr9	92177235	92188652	92182943	ENSG00000276717.1	-	unprocessed_pseudogene	KNOWN	RP11-62C3.10	1	3	0.522883
chr9	92205356	92210158	92207757	ENSG00000236115.1	+	antisense	KNOWN	RP11-62C3.6	1	3	0.437708
chr9	92210207	92293756	92251981	ENSG00000196305.17	-	protein_coding	KNOWN	IARS	13	35	0.392027
chr9	92227001	92227375	92227188	ENSG00000279007.1	+	protein_coding	KNOWN	AL136097.1	1	1	0.341606
chr9	92292458	92292547	92292502	ENSG00000281156.1	-	miRNA	KNOWN	MIR3651	1	1	0.359214
chr9	92292461	92292593	92292527	ENSG00000239183.1	-	snoRNA	KNOWN	SNORA84	1	1	0.359214
chr9	92297358	92325636	92311497	ENSG00000198000.11	-	protein_coding	KNOWN	NOL8	29	18	0.244520
chr9	92325484	92620533	92473008	ENSG00000188312.13	+	protein_coding	KNOWN	CENPP	4	8	0.090206
chr9	92339658	92341663	92340660	ENSG00000229530.1	-	processed_pseudogene	KNOWN	RP11-62C3.8	1	2	0.049764
chr9	92383967	92404696	92394331	ENSG00000106809.10	-	protein_coding	KNOWN	OGN	4	7	-0.074863
chr9	92414245	92424461	92419353	ENSG00000127083.7	-	protein_coding	KNOWN	OMD	1	3	0.175893
chr9	92456205	92482506	92469355	ENSG00000106819.11	-	protein_coding	KNOWN	ASPN	2	8	0.089891
chr9	92493554	92536655	92515104	ENSG00000106823.12	-	protein_coding	KNOWN	ECM2	4	10	0.145852
chr9	92527984	92528058	92528021	ENSG00000264158.1	-	miRNA	KNOWN	MIR4670	1	1	0.291832
chr9	92539053	92539184	92539118	ENSG00000225551.1	-	unprocessed_pseudogene	KNOWN	RP11-19J3.5	1	1	-0.031640
chr9	92613184	92670265	92641724	ENSG00000127080.9	-	protein_coding	KNOWN	IPPK	3	13	0.417438
chr9	92676943	92677407	92677175	ENSG00000213669.2	-	processed_pseudogene	KNOWN	RP11-476B13.2	1	1	0.173606
chr9	92711363	92764812	92738087	ENSG00000185963.13	-	protein_coding	KNOWN	BICD2	2	8	0.383043
chr9	92809388	92888693	92849040	ENSG00000187984.12	+	transcribed_unprocessed_pseudogene	KNOWN	ANKRD19P	6	11	-0.126720
chr9	92820977	92821079	92821028	ENSG00000252772.1	+	snRNA	KNOWN	RNU6-714P	1	1	-0.271756
chr9	92836826	92837668	92837247	ENSG00000226721.2	-	processed_pseudogene	KNOWN	EEF1DP2	1	1	0.029931
chr9	92840955	92841688	92841321	ENSG00000275318.1	-	unprocessed_pseudogene	KNOWN	RP11-526D8.11	1	1	0.029931
chr9	92845031	92878038	92861534	ENSG00000127081.13	-	protein_coding	KNOWN	ZNF484	4	6	-0.098907
chr9	92882567	92899608	92891087	ENSG00000226668.5	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-526D8.7	5	4	-0.096051
chr9	92893698	92894505	92894101	ENSG00000232843.2	-	processed_pseudogene	KNOWN	SNX18P2	1	1	-0.035622
chr9	92913156	92921560	92917358	ENSG00000188101.5	+	unprocessed_pseudogene	KNOWN	ALOX15P2	1	13	0.107933
chr9	92947451	93036236	92991843	ENSG00000127084.17	+	protein_coding	KNOWN	FGD3	8	18	0.132443
chr9	93058688	93085138	93071913	ENSG00000157303.10	+	protein_coding	KNOWN	SUSD3	5	5	0.121207
chr9	93094939	93095529	93095234	ENSG00000223446.1	-	antisense	KNOWN	RP11-274J16.5	1	2	0.419679
chr9	93096218	93113283	93104750	ENSG00000165233.17	+	protein_coding	KNOWN	CARD19	9	6	0.457130
chr9	93121489	93134288	93127888	ENSG00000131669.9	-	protein_coding	KNOWN	NINJ1	5	5	0.672461
chr9	93147040	93148556	93147798	ENSG00000203364.2	+	lincRNA	KNOWN	RP11-370F5.4	1	3	0.787881
chr9	93184916	93320572	93252744	ENSG00000165238.16	+	protein_coding	KNOWN	WNK2	16	30	0.277376
chr9	93318199	93346414	93332306	ENSG00000204352.2	-	protein_coding	KNOWN	C9orf129	1	5	0.118492
chr9	93375556	93375667	93375611	ENSG00000200570.1	+	snRNA	KNOWN	RNU6-829P	1	1	-0.072819
chr9	93417855	93417966	93417910	ENSG00000201074.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.544686
chr9	93430342	93431299	93430820	ENSG00000237385.1	-	antisense	KNOWN	RP11-165J3.5	1	2	-0.035926
chr9	93435332	93437121	93436226	ENSG00000227603.1	-	antisense	KNOWN	RP11-165J3.6	1	2	-0.035926
chr9	93446494	93453592	93450043	ENSG00000188938.15	-	protein_coding	KNOWN	FAM120AOS	11	4	0.126913
chr9	93451722	93566107	93508914	ENSG00000048828.16	+	protein_coding	KNOWN	FAM120A	5	18	0.141813
chr9	93576407	93679587	93627997	ENSG00000197724.10	+	protein_coding	KNOWN	PHF2	3	22	0.445898
chr9	93819357	93819421	93819389	ENSG00000265347.1	+	miRNA	KNOWN	MIR4291	1	1	-0.038902
chr9	93857083	93858333	93857708	ENSG00000231990.1	+	lincRNA	KNOWN	RP11-53B5.1	1	2	-0.420656
chr9	93951622	93955372	93953497	ENSG00000131668.13	-	protein_coding	KNOWN	BARX1	2	4	0.212917
chr9	93955597	93959140	93957368	ENSG00000235601.1	+	lincRNA	KNOWN	BARX1-AS1	2	3	0.212917
chr9	94030794	94109856	94070325	ENSG00000158079.14	+	protein_coding	KNOWN	PTPDC1	4	10	-0.120581
chr9	94038030	94038345	94038187	ENSG00000227666.1	+	processed_pseudogene	KNOWN	CYCSP24	1	1	-0.243799
chr9	94166289	94200627	94183458	ENSG00000269946.1	+	lincRNA	KNOWN	RP11-2B6.3	1	2	0.117911
chr9	94175952	94176043	94175997	ENSG00000199165.2	+	miRNA	KNOWN	MIRLET7A1	1	1	0.139298
chr9	94176333	94176442	94176387	ENSG00000199072.2	+	miRNA	KNOWN	MIRLET7F1	1	1	0.139298
chr9	94176458	94177892	94177175	ENSG00000269929.1	+	lincRNA	KNOWN	RP11-2B6.2	1	1	0.139298
chr9	94176602	94204568	94190585	ENSG00000230262.6	-	lincRNA	KNOWN	MIRLET7DHG	2	4	0.159968
chr9	94178826	94178930	94178878	ENSG00000199133.2	+	miRNA	KNOWN	MIRLET7D	1	1	0.139298
chr9	94259311	94301454	94280382	ENSG00000175787.16	+	protein_coding	KNOWN	ZNF169	5	5	-0.072300
chr9	94287699	94288550	94288124	ENSG00000237679.2	-	processed_pseudogene	KNOWN	VDAC1P11	1	1	-0.030492
chr9	94318196	94328644	94323420	ENSG00000130950.13	-	protein_coding	KNOWN	NUTM2F	2	8	0.174454
chr9	94332476	94360948	94346712	ENSG00000232063.1	+	lincRNA	KNOWN	RP11-307E17.8	1	3	0.118445
chr9	94338347	94338733	94338540	ENSG00000224815.3	-	processed_pseudogene	KNOWN	RP11-307E17.9	1	1	0.119737
chr9	94347234	94347563	94347398	ENSG00000282886.1	-	processed_pseudogene	KNOWN	RP11-307E17.11	1	1	0.119737
chr9	94374551	94461042	94417796	ENSG00000148110.15	+	protein_coding	KNOWN	HIATL1	2	12	-0.136688
chr9	94432631	94433273	94432952	ENSG00000278486.1	-	processed_pseudogene	KNOWN	YRDCP1	1	1	0.083327
chr9	94496275	94512879	94504577	ENSG00000224245.1	+	unprocessed_pseudogene	KNOWN	RP11-533K9.3	1	5	-0.099321
chr9	94507738	94507844	94507791	ENSG00000202445.1	+	snRNA	KNOWN	RNU6-669P	1	1	0.004529
chr9	94555069	94568127	94561598	ENSG00000231806.2	+	antisense	KNOWN	PCAT7	1	3	-0.020708
chr9	94558720	94593793	94576256	ENSG00000130957.4	-	protein_coding	KNOWN	FBP2	1	7	-0.019565
chr9	94603133	94640249	94621691	ENSG00000165140.9	-	protein_coding	KNOWN	FBP1	3	8	0.091840
chr9	94726701	95087218	94906959	ENSG00000148120.14	+	protein_coding	KNOWN	C9orf3	22	16	0.317402
chr9	94809962	94810057	94810009	ENSG00000252153.1	+	miRNA	KNOWN	MIR2278	1	1	0.303874
chr9	94824272	94824773	94824522	ENSG00000230815.1	+	sense_intronic	KNOWN	RP11-49O14.3	1	2	0.392073
chr9	94900429	94904754	94902591	ENSG00000236095.1	+	sense_intronic	KNOWN	RP11-49O14.2	1	3	0.395238
chr9	94928551	94934946	94931748	ENSG00000224764.1	-	antisense	KNOWN	RP11-54O15.3	1	2	0.297990
chr9	95065350	95065446	95065398	ENSG00000274115.1	+	miRNA	KNOWN	MIR6081	1	1	0.163782
chr9	95085208	95085304	95085256	ENSG00000207563.1	+	miRNA	KNOWN	MIR23B	1	1	0.383758
chr9	95085435	95085542	95085488	ENSG00000207864.2	+	miRNA	KNOWN	MIR27B	1	1	0.383758
chr9	95086012	95086096	95086054	ENSG00000207617.3	-	miRNA	KNOWN	MIR3074	1	1	0.383758
chr9	95099054	95317709	95208381	ENSG00000158169.11	-	protein_coding	KNOWN	FANCC	10	15	-0.022165
chr9	95113708	95114461	95114084	ENSG00000229065.1	+	antisense	KNOWN	RP11-80I15.4	1	2	0.459537
chr9	95123521	95123868	95123694	ENSG00000223849.1	+	processed_pseudogene	KNOWN	RP11-80I15.1	1	1	0.459537
chr9	95142449	95142541	95142495	ENSG00000251884.1	-	rRNA	KNOWN	RNA5SP288	1	1	0.355026
chr9	95292338	95294810	95293574	ENSG00000230221.2	+	processed_pseudogene	KNOWN	RP11-173G21.1	1	1	-0.492971
chr9	95406990	95407662	95407326	ENSG00000271384.1	-	lincRNA	KNOWN	RP11-435O5.7	1	1	-0.135419
chr9	95413267	95413449	95413358	ENSG00000213761.4	-	processed_pseudogene	KNOWN	MT1P1	1	1	-0.017633
chr9	95414834	95426796	95420815	ENSG00000237857.2	-	lincRNA	KNOWN	RP11-435O5.2	1	2	-0.017633
chr9	95442980	95517057	95480018	ENSG00000185920.15	-	protein_coding	KNOWN	PTCH1	27	24	0.166945
chr9	95494924	95495379	95495151	ENSG00000271314.1	+	antisense	KNOWN	RP11-435O5.6	1	1	0.075504
chr9	95506235	95507636	95506935	ENSG00000271155.1	+	antisense	KNOWN	RP11-435O5.5	1	1	0.075504
chr9	95514045	95514520	95514282	ENSG00000271659.1	+	antisense	KNOWN	RP11-435O5.4	1	1	0.569571
chr9	95599545	95606286	95602915	ENSG00000229345.1	-	lincRNA	KNOWN	RP11-332M4.1	1	3	-0.048489
chr9	95650154	95715718	95682936	ENSG00000228142.2	+	lincRNA	KNOWN	RP11-180I4.2	2	3	-0.210756
chr9	95652912	95653266	95653089	ENSG00000227358.1	+	processed_pseudogene	KNOWN	RP11-180I4.1	1	1	-0.283300
chr9	95759231	95875977	95817604	ENSG00000175611.11	-	processed_transcript	KNOWN	LINC00476	6	4	0.023787
chr9	95772323	95774734	95773528	ENSG00000268926.2	+	lincRNA	KNOWN	RP11-180I4.4	1	1	0.129467
chr9	95859904	95860016	95859960	ENSG00000252847.1	+	snRNA	KNOWN	RNU2-46P	1	1	-0.071144
chr9	95875701	96014571	95945136	ENSG00000182150.15	+	protein_coding	KNOWN	ERCC6L2	8	15	-0.248207
chr9	95905005	95905141	95905073	ENSG00000199202.1	+	rRNA	KNOWN	RNA5SP289	1	1	-0.508401
chr9	95918136	95918704	95918420	ENSG00000237631.2	+	processed_pseudogene	KNOWN	RP11-72B4.2	1	1	-0.069000
chr9	96019732	96027965	96023848	ENSG00000225194.2	-	lincRNA	KNOWN	LINC00092	3	2	0.152655
chr9	96095211	96101912	96098561	ENSG00000237212.1	+	lincRNA	KNOWN	RP11-569G13.2	1	6	-0.158180
chr9	96103079	96103174	96103126	ENSG00000201938.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.158180
chr9	96106661	96116411	96111536	ENSG00000275465.5	-	lincRNA	KNOWN	RP11-569G13.3	1	3	-0.152583
chr9	96146007	96147856	96146931	ENSG00000224546.2	+	processed_pseudogene	KNOWN	EIF4BP3	1	1	-0.157622
chr9	96235306	96302152	96268729	ENSG00000130948.9	-	protein_coding	KNOWN	HSD17B3	7	11	-0.229418
chr9	96235823	96235922	96235872	ENSG00000265367.1	-	miRNA	NOVEL	AL160269.1	1	1	-0.066156
chr9	96246462	96250393	96248427	ENSG00000232283.1	+	antisense	KNOWN	RP11-240L7.4	1	3	-0.073525
chr9	96256216	96256319	96256267	ENSG00000207276.1	-	snRNA	KNOWN	RNU6-1160P	1	1	-0.139678
chr9	96320706	96383710	96352208	ENSG00000130958.11	-	protein_coding	KNOWN	SLC35D2	5	12	-0.059501
chr9	96385941	96418329	96402135	ENSG00000165244.6	-	protein_coding	KNOWN	ZNF367	1	5	0.225942
chr9	96407284	96407797	96407540	ENSG00000238251.2	+	processed_pseudogene	KNOWN	RP11-172F4.2	1	1	0.163250
chr9	96450201	96491336	96470768	ENSG00000130956.13	+	protein_coding	KNOWN	HABP4	3	8	0.204012
chr9	96490241	96619830	96555035	ENSG00000081377.16	-	protein_coding	KNOWN	CDC14B	13	15	0.261568
chr9	96639577	96655303	96647440	ENSG00000158122.11	-	protein_coding	KNOWN	AAED1	4	6	0.250819
chr9	96687056	96721121	96704088	ENSG00000224848.1	+	lincRNA	KNOWN	RP11-535M15.1	1	2	0.027180
chr9	96725890	96727469	96726679	ENSG00000233820.2	+	transcribed_processed_pseudogene	KNOWN	RP11-535M15.2	2	2	0.002557
chr9	96729014	96729155	96729084	ENSG00000280644.1	+	miRNA	NOVEL	AL589843.1	1	1	0.002557
chr9	96755865	96778129	96766997	ENSG00000081386.12	-	protein_coding	KNOWN	ZNF510	4	6	-0.184635
chr9	96816472	96875623	96846047	ENSG00000196597.11	-	protein_coding	KNOWN	ZNF782	8	6	-0.253243
chr9	96898066	97013580	96955823	ENSG00000196312.11	-	protein_coding	KNOWN	HIATL2	3	5	0.043973
chr9	96910076	96910405	96910240	ENSG00000269907.1	+	processed_pseudogene	KNOWN	RP11-330M2.4	1	1	0.107673
chr9	96918928	96919318	96919123	ENSG00000227257.1	+	processed_pseudogene	KNOWN	RP11-330M2.3	1	1	0.107673
chr9	96928310	96940253	96934281	ENSG00000188152.12	+	protein_coding	KNOWN	NUTM2G	2	7	0.216718
chr9	96954820	96955461	96955140	ENSG00000236745.2	+	processed_pseudogene	KNOWN	YRDCP2	1	1	-0.041963
chr9	97029679	97039643	97034661	ENSG00000136943.10	-	protein_coding	KNOWN	CTSV	3	8	-0.364132
chr9	97067749	97068628	97068188	ENSG00000197214.5	+	processed_pseudogene	KNOWN	TCEA1P1	1	1	-0.197515
chr9	97075671	97081945	97078808	ENSG00000228376.3	-	transcribed_processed_pseudogene	KNOWN	GAS2L1P2	2	3	0.038694
chr9	97093694	97094638	97094166	ENSG00000228038.1	-	processed_pseudogene	KNOWN	VN1R51P	1	1	-0.666387
chr9	97121659	97122489	97122074	ENSG00000213612.3	+	processed_pseudogene	KNOWN	FAM220CP	1	1	-0.582913
chr9	97151894	97152694	97152294	ENSG00000277103.1	-	processed_pseudogene	KNOWN	RP11-520B13.8	1	1	0.004044
chr9	97156570	97221235	97188902	ENSG00000159712.10	-	unprocessed_pseudogene	KNOWN	ANKRD18CP	1	16	-0.483365
chr9	97192923	97193025	97192974	ENSG00000252721.1	-	snRNA	KNOWN	RNU6-798P	1	1	-0.615827
chr9	97195351	97197687	97196519	ENSG00000242375.1	-	lincRNA	KNOWN	RP11-498P14.3	1	3	-0.615827
chr9	97198303	97199511	97198907	ENSG00000188801.9	-	processed_pseudogene	KNOWN	ZNF322P1	1	1	-0.615827
chr9	97200475	97238700	97219587	ENSG00000203279.3	-	lincRNA	KNOWN	RP11-498P14.5	2	3	-0.388573
chr9	97233201	97235014	97234107	ENSG00000235494.1	+	lincRNA	KNOWN	RP11-498P14.4	1	2	-0.153121
chr9	97238449	97297314	97267881	ENSG00000254876.5	+	processed_transcript	KNOWN	RP11-23J9.5	2	16	-0.186587
chr9	97238497	97377287	97307892	ENSG00000255036.6	+	processed_transcript	KNOWN	RP11-23J9.4	4	49	-0.029532
chr9	97238645	97246184	97242414	ENSG00000254483.1	+	unprocessed_pseudogene	KNOWN	RP11-23J9.6	1	2	-0.153121
chr9	97276566	97295759	97286162	ENSG00000254633.1	+	unitary_pseudogene	KNOWN	RP11-23J9.7	1	12	-0.022604
chr9	97307304	97378524	97342914	ENSG00000197816.13	+	protein_coding	KNOWN	CCDC180	13	37	0.128749
chr9	97363554	97363681	97363617	ENSG00000221269.1	-	miRNA	KNOWN	MIR1302-8	1	1	0.201403
chr9	97386240	97396112	97391176	ENSG00000228957.1	-	unprocessed_pseudogene	KNOWN	RP11-23J9.3	1	11	0.248201
chr9	97411950	97496125	97454037	ENSG00000196116.7	+	protein_coding	KNOWN	TDRD7	2	17	-0.169455
chr9	97501180	97601748	97551464	ENSG00000136842.13	+	protein_coding	KNOWN	TMOD1	3	10	0.001830
chr9	97512706	97517836	97515271	ENSG00000228174.7	-	antisense	KNOWN	RP11-244N9.6	2	5	0.077270
chr9	97600080	97633575	97616827	ENSG00000136925.14	-	protein_coding	KNOWN	TSTD2	6	10	-0.015252
chr9	97633626	97673748	97653687	ENSG00000136937.12	+	protein_coding	KNOWN	NCBP1	5	23	0.028510
chr9	97634515	97636051	97635283	ENSG00000231521.1	-	antisense	KNOWN	RP11-244N9.4	1	3	0.213298
chr9	97674909	97697357	97686133	ENSG00000136936.10	-	protein_coding	KNOWN	XPA	4	7	0.223239
chr9	97698922	97700734	97699828	ENSG00000214417.4	+	processed_pseudogene	KNOWN	KRT18P13	1	2	0.075504
chr9	97700234	97700325	97700279	ENSG00000266608.1	+	miRNA	NOVEL	AL445531.1	1	1	0.075504
chr9	97743208	97744935	97744071	ENSG00000260677.1	+	lincRNA	KNOWN	RP11-546O6.4	1	1	0.364723
chr9	97805935	97810008	97807971	ENSG00000236130.1	-	lincRNA	KNOWN	PTCSC2	1	2	0.592212
chr9	97853254	97856715	97854984	ENSG00000178919.8	+	protein_coding	KNOWN	FOXE1	1	1	0.589491
chr9	97904489	97922570	97913529	ENSG00000136932.13	-	protein_coding	KNOWN	TRMO	7	8	0.297540
chr9	97915690	97915796	97915743	ENSG00000201830.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.227969
chr9	97926791	97944856	97935823	ENSG00000136929.12	-	protein_coding	KNOWN	HEMGN	2	5	-0.028344
chr9	97983361	98015943	97999652	ENSG00000136938.8	+	protein_coding	KNOWN	ANP32B	3	7	0.262634
chr9	97986551	97987656	97987103	ENSG00000236896.1	-	antisense	KNOWN	RP11-535C21.3	1	2	-0.137743
chr9	98032230	98032335	98032282	ENSG00000212521.1	+	snRNA	KNOWN	RNU6-918P	1	1	0.241628
chr9	98056739	98083075	98069907	ENSG00000095380.10	+	protein_coding	KNOWN	NANS	6	6	0.356841
chr9	98069275	98119212	98094243	ENSG00000106785.14	-	protein_coding	KNOWN	TRIM14	6	7	0.391784
chr9	98115885	98116135	98116010	ENSG00000274011.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.113687
chr9	98120975	98192640	98156807	ENSG00000106789.12	-	protein_coding	KNOWN	CORO2A	2	12	0.334358
chr9	98198999	98255721	98227360	ENSG00000095383.19	-	protein_coding	KNOWN	TBC1D2	6	13	0.615249
chr9	98229149	98229217	98229183	ENSG00000278412.1	-	miRNA	KNOWN	MIR6854	1	1	0.650865
chr9	98234709	98235567	98235138	ENSG00000224001.2	+	processed_pseudogene	KNOWN	RP11-270F18.2	1	2	0.566901
chr9	98288082	98709197	98498639	ENSG00000136928.5	-	protein_coding	KNOWN	GABBR2	8	19	0.312184
chr9	98606833	98608133	98607483	ENSG00000229897.2	+	processed_pseudogene	KNOWN	SEPT7P7	1	1	0.359096
chr9	98634605	98634730	98634667	ENSG00000281579.1	+	miRNA	NOVEL	AL353782.2	1	1	0.355026
chr9	98712730	98712814	98712772	ENSG00000273751.2	-	miRNA	NOVEL	AL353782.1	1	1	0.099371
chr9	98731329	98796965	98764147	ENSG00000165138.17	-	protein_coding	KNOWN	ANKS6	7	15	0.297492
chr9	98807699	98850081	98828890	ENSG00000119514.6	+	protein_coding	KNOWN	GALNT12	4	10	0.418490
chr9	98847172	98872415	98859793	ENSG00000267026.5	-	antisense	KNOWN	RP11-92C4.3	23	5	0.228557
chr9	98890590	98891937	98891263	ENSG00000229338.1	+	processed_pseudogene	KNOWN	RP11-92C4.4	1	2	0.320433
chr9	98943179	99070792	99006985	ENSG00000204291.10	+	protein_coding	KNOWN	COL15A1	5	43	0.478847
chr9	98943337	98943775	98943556	ENSG00000270412.1	-	antisense	KNOWN	RP11-92C4.6	1	1	0.121286
chr9	99074120	99074230	99074175	ENSG00000264740.2	-	miRNA	NOVEL	AL354923.1	1	1	0.219999
chr9	99104038	99154192	99129115	ENSG00000106799.12	+	protein_coding	KNOWN	TGFBR1	10	9	-0.030610
chr9	99145840	99145966	99145903	ENSG00000252942.1	-	rRNA	KNOWN	RNA5SP290	1	1	-0.208762
chr9	99183373	99184891	99184132	ENSG00000227269.1	+	lincRNA	KNOWN	RP11-96L7.2	1	2	0.177568
chr9	99185587	99185866	99185726	ENSG00000240235.3	-	misc_RNA	KNOWN	RN7SL794P	1	1	0.177568
chr9	99216426	99221956	99219191	ENSG00000119523.9	-	protein_coding	KNOWN	ALG2	3	3	-0.231846
chr9	99222064	99230615	99226339	ENSG00000106803.9	+	protein_coding	KNOWN	SEC61B	3	4	-0.198934
chr9	99284022	99284373	99284197	ENSG00000222337.1	+	misc_RNA	KNOWN	RN7SKP225	1	1	-0.227945
chr9	99305176	99306611	99305893	ENSG00000255815.3	+	processed_pseudogene	KNOWN	KRT8P11	1	1	-0.085795
chr9	99355337	99377240	99366288	ENSG00000271086.5	-	lincRNA	KNOWN	NAMA	7	10	0.057599
chr9	99357827	99357957	99357892	ENSG00000277828.1	+	misc_RNA	NOVEL	NAMA_1	1	1	-0.030865
chr9	99368447	99368566	99368506	ENSG00000277465.1	+	misc_RNA	NOVEL	NAMA_2	1	1	-0.030865
chr9	99531696	99536924	99534310	ENSG00000234860.1	+	lincRNA	KNOWN	RP11-547C13.1	1	2	-0.543852
chr9	99585786	99819889	99702837	ENSG00000237461.1	-	lincRNA	KNOWN	RP11-554F20.1	1	7	-0.264929
chr9	99821855	99866891	99844373	ENSG00000119508.17	+	protein_coding	KNOWN	NR4A3	4	9	-0.102545
chr9	99886322	99906601	99896461	ENSG00000255145.2	-	antisense	KNOWN	STX17-AS1	1	3	-0.088871
chr9	99906633	99970341	99938487	ENSG00000136874.10	+	protein_coding	KNOWN	STX17	12	8	-0.101066
chr9	99915077	99929896	99922486	ENSG00000254571.1	-	antisense	KNOWN	RP11-60I3.4	1	2	-0.179921
chr9	99979179	100099040	100039109	ENSG00000023318.7	-	protein_coding	KNOWN	ERP44	1	12	-0.112620
chr9	99998301	99999069	99998685	ENSG00000234709.2	-	transcribed_processed_pseudogene	KNOWN	UPF3AP3	1	1	-0.101689
chr9	100099256	100301000	100200128	ENSG00000119509.12	+	protein_coding	KNOWN	INVS	7	18	-0.175355
chr9	100102559	100102839	100102699	ENSG00000239908.3	+	misc_RNA	KNOWN	RN7SL75P	1	1	-0.146795
chr9	100116755	100117651	100117203	ENSG00000238172.2	-	processed_pseudogene	KNOWN	RPS2P35	1	1	-0.078941
chr9	100120435	100120900	100120667	ENSG00000270995.1	-	processed_pseudogene	KNOWN	RP11-29B11.5	1	1	-0.078941
chr9	100175178	100176054	100175616	ENSG00000231697.3	+	transcribed_processed_pseudogene	KNOWN	NANOGP5	1	1	-0.150369
chr9	100302077	100352939	100327508	ENSG00000136891.13	-	protein_coding	KNOWN	TEX10	4	15	0.036867
chr9	100395629	100395740	100395684	ENSG00000263475.2	+	miRNA	NOVEL	AL353805.1	1	1	0.301915
chr9	100427156	100451711	100439433	ENSG00000066697.14	+	protein_coding	KNOWN	MSANTD3	7	4	0.396064
chr9	100442271	100577636	100509953	ENSG00000251349.3	+	protein_coding	KNOWN	MSANTD3-TMEFF1	1	10	-0.099942
chr9	100473113	100577636	100525374	ENSG00000241697.4	+	protein_coding	KNOWN	TMEFF1	1	10	-0.161136
chr9	100578079	100587906	100582992	ENSG00000170681.6	+	protein_coding	KNOWN	MURC	1	2	-0.115053
chr9	100581079	100581379	100581229	ENSG00000200966.1	-	misc_RNA	KNOWN	RN7SKP87	1	1	-0.115053
chr9	100731240	100732355	100731797	ENSG00000237999.2	+	processed_pseudogene	KNOWN	ACTG1P19	1	1	-0.578218
chr9	100732033	100732116	100732074	ENSG00000281312.1	+	miRNA	NOVEL	AL390876.1	1	1	-0.578218
chr9	100912320	100912741	100912530	ENSG00000230161.1	+	processed_pseudogene	KNOWN	RP11-62L10.1	1	1	-0.521950
chr9	100975668	100976682	100976175	ENSG00000229541.2	+	processed_pseudogene	KNOWN	GAPDHP26	1	1	-0.449469
chr9	101028709	101325135	101176922	ENSG00000148123.14	+	protein_coding	KNOWN	PLPPR1	5	8	-0.412220
chr9	101125436	101125921	101125678	ENSG00000238143.1	-	processed_pseudogene	KNOWN	RP11-70K10.2	1	1	-0.674336
chr9	101322477	101322533	101322505	ENSG00000253041.1	+	snoRNA	NOVEL	SNORA31	1	1	-0.568522
chr9	101334084	101339347	101336715	ENSG00000227411.1	-	unitary_pseudogene	KNOWN	BAATP1	1	3	-0.248499
chr9	101356466	101356844	101356655	ENSG00000236763.2	-	processed_pseudogene	KNOWN	TRMT112P4	1	1	-0.155389
chr9	101358932	101361242	101360087	ENSG00000230328.2	+	processed_pseudogene	KNOWN	RP11-35N6.6	1	3	-0.155389
chr9	101360417	101383519	101371968	ENSG00000136881.11	-	protein_coding	KNOWN	BAAT	2	4	-0.400638
chr9	101375344	101376603	101375973	ENSG00000234502.2	-	processed_pseudogene	KNOWN	FYTTD1P1	1	2	-0.574452
chr9	101387633	101398614	101393123	ENSG00000136897.7	-	protein_coding	KNOWN	MRPL50	1	2	-0.143537
chr9	101398873	101410660	101404766	ENSG00000136870.10	+	protein_coding	KNOWN	ZNF189	4	4	-0.056820
chr9	101420578	101435823	101428200	ENSG00000136872.17	-	protein_coding	KNOWN	ALDOB	3	10	-0.481335
chr9	101449801	101449933	101449867	ENSG00000270982.1	+	processed_pseudogene	KNOWN	RP11-490D19.11	1	1	-0.306874
chr9	101468439	101481502	101474970	ENSG00000225376.5	+	antisense	KNOWN	TMEM246-AS1	4	4	0.081445
chr9	101473171	101533537	101503354	ENSG00000165152.8	-	protein_coding	KNOWN	TMEM246	4	4	-0.013716
chr9	101501643	101501885	101501764	ENSG00000233055.1	-	processed_pseudogene	KNOWN	RP11-490D19.8	1	1	-0.075736
chr9	101533851	101563344	101548597	ENSG00000155827.11	+	protein_coding	KNOWN	RNF20	6	20	-0.365063
chr9	101549686	101549771	101549728	ENSG00000265068.1	-	miRNA	NOVEL	AL591377.1	1	1	-0.317529
chr9	101569353	101738580	101653966	ENSG00000198785.4	-	protein_coding	KNOWN	GRIN3A	2	9	-0.461595
chr9	101591615	101595001	101593308	ENSG00000188386.5	-	protein_coding	KNOWN	PPP3R2	1	1	-0.555948
chr9	101793454	101793756	101793605	ENSG00000230302.2	-	processed_pseudogene	KNOWN	MTND3P4	1	1	-0.433470
chr9	102055252	102055741	102055496	ENSG00000230418.2	-	processed_pseudogene	KNOWN	ARL2BPP7	1	1	-0.799859
chr9	102256604	102256710	102256657	ENSG00000238882.1	+	snRNA	KNOWN	RNU6-329P	1	1	-0.406462
chr9	102295377	102295464	102295420	ENSG00000222117.1	+	miRNA	NOVEL	AL391867.1	1	1	-0.987080
chr9	102515204	102518308	102516756	ENSG00000235901.2	+	processed_pseudogene	KNOWN	RP11-342F21.1	1	1	-0.966223
chr9	102519636	102657514	102588575	ENSG00000204250.3	+	lincRNA	KNOWN	LINC00587	1	5	-0.607767
chr9	102611162	102612155	102611658	ENSG00000232242.2	-	processed_pseudogene	KNOWN	ZYG11AP1	1	2	-0.154364
chr9	102922574	102923244	102922909	ENSG00000234269.2	+	processed_pseudogene	KNOWN	RP11-338N12.1	1	1	-0.412931
chr9	102995311	103018488	103006899	ENSG00000155833.14	+	protein_coding	KNOWN	CYLC2	4	8	-0.621223
chr9	103065416	103065598	103065507	ENSG00000229830.1	+	processed_pseudogene	KNOWN	RP11-341A22.1	1	1	-0.667000
chr9	103140523	103325034	103232778	ENSG00000225564.6	-	lincRNA	KNOWN	LINC01492	3	10	-0.568521
chr9	103361952	103429892	103395922	ENSG00000226566.2	-	lincRNA	KNOWN	RP11-436F21.1	1	3	-0.421524
chr9	103689473	103689577	103689525	ENSG00000253031.1	-	rRNA	KNOWN	RNA5SP291	1	1	-0.673543
chr9	104080024	104093073	104086548	ENSG00000270332.1	-	lincRNA	KNOWN	SMC2-AS1	2	3	-0.506137
chr9	104094260	104141417	104117838	ENSG00000136824.18	+	protein_coding	KNOWN	SMC2	5	25	-0.301083
chr9	104270228	104286955	104278591	ENSG00000242111.1	+	unitary_pseudogene	KNOWN	TOPORSLP1	3	4	-0.492971
chr9	104328320	104329396	104328858	ENSG00000203396.3	-	processed_pseudogene	KNOWN	RP11-217O12.1	1	1	-0.189779
chr9	104504263	104505222	104504742	ENSG00000186881.3	+	protein_coding	KNOWN	OR13F1	1	1	-0.124583
chr9	104520829	104537180	104529004	ENSG00000283001.1	+	antisense	KNOWN	RP11-317C20.9	1	2	-0.595059
chr9	104526253	104527209	104526731	ENSG00000148136.5	-	protein_coding	KNOWN	OR13C4	1	1	-0.619883
chr9	104535749	104536856	104536302	ENSG00000204246.2	-	protein_coding	KNOWN	OR13C3	1	1	-0.563360
chr9	104569168	104570130	104569649	ENSG00000186943.1	+	protein_coding	KNOWN	OR13C8	1	1	-0.538774
chr9	104590044	104590950	104590497	ENSG00000237443.1	+	unprocessed_pseudogene	KNOWN	OR13D2P	1	1	-0.619287
chr9	104598457	104599413	104598935	ENSG00000277556.1	-	protein_coding	KNOWN	OR13C5	1	1	-0.619287
chr9	104604671	104605627	104605149	ENSG00000276119.1	-	protein_coding	KNOWN	OR13C2	1	1	-0.619287
chr9	104617248	104618204	104617726	ENSG00000136839.1	-	protein_coding	KNOWN	OR13C9	1	1	-0.341905
chr9	104629754	104631017	104630385	ENSG00000273423.1	+	unprocessed_pseudogene	KNOWN	OR13I1P	1	1	-0.542708
chr9	104656754	104657716	104657235	ENSG00000235248.2	-	unprocessed_pseudogene	KNOWN	OR13C1P	1	1	-0.801093
chr9	104694422	104695462	104694942	ENSG00000179055.6	+	protein_coding	KNOWN	OR13D1	1	1	-0.350319
chr9	104722335	104723271	104722803	ENSG00000188712.4	+	unprocessed_pseudogene	KNOWN	OR13D3P	1	1	-0.416349
chr9	104747688	104760122	104753905	ENSG00000136783.9	+	protein_coding	KNOWN	NIPSNAP3A	2	6	-0.412499
chr9	104764157	104777457	104770807	ENSG00000165028.11	+	protein_coding	KNOWN	NIPSNAP3B	3	6	-0.328205
chr9	104781002	104928237	104854619	ENSG00000165029.15	-	protein_coding	KNOWN	ABCA1	4	50	0.134595
chr9	104927553	104928892	104928222	ENSG00000226334.1	+	antisense	KNOWN	RP11-217B7.2	1	2	0.211407
chr9	104990796	104991781	104991288	ENSG00000230013.1	-	lincRNA	KNOWN	RP11-217B7.3	1	2	0.045449
chr9	105096756	105097061	105096908	ENSG00000201583.1	+	misc_RNA	KNOWN	RN7SKP191	1	1	0.014409
chr9	105244622	105439171	105341896	ENSG00000070214.15	+	protein_coding	KNOWN	SLC44A1	7	17	-0.087327
chr9	105447796	105552433	105500114	ENSG00000106701.11	+	protein_coding	KNOWN	FSD1L	8	14	-0.142824
chr9	105520128	105526359	105523243	ENSG00000229419.1	+	processed_pseudogene	KNOWN	RALGAPA1P	1	1	-0.323046
chr9	105554035	105558029	105556032	ENSG00000228317.1	-	antisense	KNOWN	RP11-235C23.5	1	3	-0.326073
chr9	105558130	105641118	105599624	ENSG00000106692.13	+	protein_coding	KNOWN	FKTN	9	12	-0.387015
chr9	105656369	105657989	105657179	ENSG00000279609.1	+	TEC	KNOWN	RP11-235C23.6	1	1	-0.002224
chr9	105662457	105663112	105662784	ENSG00000186051.6	+	protein_coding	KNOWN	TAL2	1	1	-0.002224
chr9	105694544	105776612	105735578	ENSG00000095209.11	+	protein_coding	KNOWN	TMEM38B	5	6	-0.342621
chr9	105710290	105710781	105710535	ENSG00000228366.1	-	processed_pseudogene	KNOWN	RP11-18B3.3	1	1	-0.296279
chr9	105758164	105760755	105759459	ENSG00000232486.1	+	processed_pseudogene	KNOWN	RP11-18B3.2	1	2	-0.456134
chr9	105849710	105851425	105850567	ENSG00000228948.2	+	processed_pseudogene	KNOWN	SLC25A6P5	2	2	-0.382748
chr9	106061354	106064825	106063089	ENSG00000225002.2	-	lincRNA	KNOWN	RP11-6F6.1	1	2	-0.433470
chr9	106278392	106604795	106441593	ENSG00000234323.5	+	lincRNA	KNOWN	RP11-308N19.1	2	7	-0.440496
chr9	106584142	106591952	106588047	ENSG00000229297.1	-	lincRNA	KNOWN	RP11-540H22.2	1	2	-0.373229
chr9	106600928	106601022	106600975	ENSG00000277889.1	+	miRNA	KNOWN	MIR8081	1	1	-0.193680
chr9	106615078	106615806	106615442	ENSG00000237062.1	-	lincRNA	KNOWN	RP11-308N19.3	1	2	-0.280426
chr9	106616058	106702662	106659360	ENSG00000234229.7	+	lincRNA	KNOWN	LINC01505	2	7	-0.406235
chr9	106679977	106680329	106680153	ENSG00000200131.1	+	misc_RNA	KNOWN	RN7SKP77	1	1	-0.249625
chr9	106722350	106722930	106722640	ENSG00000228143.2	+	processed_pseudogene	KNOWN	RP11-308N19.5	1	1	-0.179605
chr9	106843749	106843866	106843807	ENSG00000212276.1	-	rRNA	KNOWN	RNA5SP292	1	1	-0.680286
chr9	106863097	107013634	106938365	ENSG00000148143.12	+	protein_coding	KNOWN	ZNF462	12	13	-0.098328
chr9	106974833	107102988	107038910	ENSG00000230782.1	-	antisense	KNOWN	RP11-508N12.2	2	5	-0.217977
chr9	106978776	106979554	106979165	ENSG00000231562.1	-	processed_pseudogene	KNOWN	RP11-508N12.3	1	1	-0.043892
chr9	107115784	107115954	107115869	ENSG00000223615.2	+	processed_pseudogene	KNOWN	RP11-196I18.2	1	1	0.021982
chr9	107116829	107117557	107117193	ENSG00000225531.1	+	processed_pseudogene	KNOWN	RP11-196I18.3	1	1	0.021982
chr9	107117459	107121705	107119582	ENSG00000226047.1	-	lincRNA	KNOWN	RP11-196I18.4	1	3	0.021982
chr9	107169569	107171148	107170358	ENSG00000226535.1	-	processed_pseudogene	KNOWN	RP11-417L14.1	1	1	-0.175783
chr9	107283137	107332194	107307665	ENSG00000119318.12	+	protein_coding	KNOWN	RAD23B	5	10	-0.050414
chr9	107292369	107292456	107292412	ENSG00000276883.1	-	miRNA	NOVEL	AL137852.1	1	1	-0.124583
chr9	107420284	107430802	107425543	ENSG00000226825.1	-	lincRNA	KNOWN	LINC01509	2	4	-0.190097
chr9	107458038	107458306	107458172	ENSG00000213558.3	-	processed_pseudogene	KNOWN	HMGN2P32	1	1	-0.223870
chr9	107475036	107475139	107475087	ENSG00000199905.1	-	snRNA	KNOWN	RNU6-492P	1	1	-0.082038
chr9	107484852	107490482	107487667	ENSG00000136826.14	-	protein_coding	KNOWN	KLF4	6	5	-0.064930
chr9	107534390	107535162	107534776	ENSG00000236005.1	+	processed_pseudogene	KNOWN	RP11-438P9.1	1	2	-0.099434
chr9	107543151	107543616	107543383	ENSG00000227350.1	-	processed_pseudogene	KNOWN	RP11-438P9.2	1	1	-0.099434
chr9	107663140	107663246	107663193	ENSG00000202308.1	-	snRNA	KNOWN	RNU6-996P	1	1	-0.065549
chr9	107712364	107712461	107712412	ENSG00000275701.1	+	miRNA	NOVEL	AL389915.1	1	1	0.123701
chr9	107797744	107797847	107797795	ENSG00000222558.1	-	snRNA	KNOWN	RNU6-1064P	1	1	-0.077933
chr9	107811616	107811914	107811765	ENSG00000244104.3	-	misc_RNA	KNOWN	RN7SL659P	1	1	-0.035764
chr9	107834509	107834829	107834669	ENSG00000231293.1	-	processed_pseudogene	KNOWN	RPL36AP6	1	1	0.126343
chr9	107853783	107854258	107854020	ENSG00000233727.1	-	processed_pseudogene	KNOWN	RP11-380I20.2	1	2	-0.320449
chr9	107918866	107918978	107918922	ENSG00000222459.1	-	rRNA	KNOWN	RNA5SP293	1	1	-0.309525
chr9	107963703	107964045	107963874	ENSG00000236783.1	-	processed_pseudogene	KNOWN	RPS15AP27	1	1	-0.141965
chr9	108040213	108040592	108040402	ENSG00000213557.4	+	processed_pseudogene	KNOWN	RP11-240E2.2	1	1	0.108386
chr9	108097432	108097851	108097641	ENSG00000237360.2	-	processed_pseudogene	KNOWN	CHCHD4P2	1	1	-0.152546
chr9	108252154	108254820	108253487	ENSG00000230030.1	-	lincRNA	KNOWN	RP11-505C13.1	1	2	-0.516817
chr9	108358852	108358929	108358890	ENSG00000222512.1	-	miRNA	NOVEL	AL137019.1	1	1	-0.364386
chr9	108626833	108627150	108626991	ENSG00000169253.3	+	processed_pseudogene	KNOWN	RP11-220D10.1	1	1	-0.181332
chr9	108701370	108703092	108702231	ENSG00000231678.2	-	lincRNA	KNOWN	RP11-339N8.1	1	2	-0.174083
chr9	108821697	108822004	108821850	ENSG00000231810.1	+	processed_pseudogene	KNOWN	RPL36AP35	1	1	-0.288151
chr9	108836333	108836597	108836465	ENSG00000213556.3	+	processed_pseudogene	KNOWN	RP11-3J11.1	1	1	-0.272883
chr9	108854589	108856967	108855778	ENSG00000148156.7	-	protein_coding	KNOWN	ACTL7B	1	1	0.128288
chr9	108862266	108863759	108863012	ENSG00000187003.6	+	protein_coding	KNOWN	ACTL7A	1	1	0.128288
chr9	108867517	108934116	108900816	ENSG00000070061.14	-	protein_coding	KNOWN	IKBKAP	4	37	-0.213019
chr9	108934181	108950744	108942462	ENSG00000119328.11	+	protein_coding	KNOWN	FAM206A	4	6	0.140224
chr9	108942569	109013529	108978049	ENSG00000119326.14	-	protein_coding	KNOWN	CTNNAL1	5	19	-0.093975
chr9	108992409	108992569	108992489	ENSG00000201227.1	-	rRNA	KNOWN	RNA5-8SP3	1	1	-0.116955
chr9	109015152	109119945	109067548	ENSG00000106771.12	-	protein_coding	KNOWN	TMEM245	5	18	0.144083
chr9	109042386	109042487	109042436	ENSG00000199331.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.057844
chr9	109046229	109046298	109046263	ENSG00000207698.1	-	miRNA	KNOWN	MIR32	1	1	0.057844
chr9	109130293	109167291	109148792	ENSG00000260230.2	-	protein_coding	KNOWN	FRRS1L	1	5	-0.118097
chr9	109171975	109320964	109246469	ENSG00000095203.14	-	protein_coding	KNOWN	EPB41L4B	2	26	0.070156
chr9	109196201	109196309	109196255	ENSG00000200106.1	-	snRNA	KNOWN	RNU6-984P	1	1	0.169068
chr9	109266277	109266375	109266326	ENSG00000265647.1	+	miRNA	NOVEL	AL358815.1	1	1	-0.003165
chr9	109300186	109301172	109300679	ENSG00000237124.1	+	unprocessed_pseudogene	KNOWN	MTND2P11	1	2	0.196961
chr9	109324685	109324796	109324740	ENSG00000207329.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.083724
chr9	109375466	109498313	109436889	ENSG00000070159.13	-	protein_coding	KNOWN	PTPN3	6	26	-0.004964
chr9	109511475	109511545	109511510	ENSG00000263861.1	-	miRNA	KNOWN	MIR3927	1	1	0.157580
chr9	109532830	109534332	109533581	ENSG00000213539.4	-	processed_pseudogene	KNOWN	YBX1P6	1	2	-0.373672
chr9	109640788	109946703	109793745	ENSG00000243444.7	+	protein_coding	KNOWN	PALM2	5	7	-0.049374
chr9	109760360	109772043	109766201	ENSG00000232939.1	-	antisense	KNOWN	RP11-406O23.2	1	3	0.028492
chr9	109780309	110172512	109976410	ENSG00000157654.17	+	protein_coding	KNOWN	PALM2-AKAP2	3	11	0.123091
chr9	110024881	110025358	110025119	ENSG00000228053.1	-	processed_pseudogene	KNOWN	RP11-151F5.2	1	1	0.214388
chr9	110048598	110172512	110110555	ENSG00000241978.9	+	protein_coding	KNOWN	AKAP2	8	5	0.234726
chr9	110190048	110208189	110199118	ENSG00000188959.9	-	protein_coding	KNOWN	C9orf152	2	2	0.234596
chr9	110243811	110256640	110250225	ENSG00000136810.12	-	protein_coding	KNOWN	TXN	3	5	0.213038
chr9	110303521	110337884	110320702	ENSG00000204193.10	-	protein_coding	KNOWN	TXNDC8	4	6	-0.032946
chr9	110365251	110579880	110472565	ENSG00000165124.17	-	protein_coding	KNOWN	SVEP1	5	48	-0.054259
chr9	110369592	110369698	110369645	ENSG00000206658.1	-	snRNA	KNOWN	RNU6-1039P	1	1	0.021170
chr9	110539690	110539798	110539744	ENSG00000212254.1	-	snRNA	KNOWN	RNU6-124P	1	1	0.145630
chr9	110599475	110605219	110602347	ENSG00000232896.1	+	lincRNA	KNOWN	RP11-410K21.2	1	3	0.215374
chr9	110668771	110801620	110735195	ENSG00000030304.13	+	protein_coding	KNOWN	MUSK	7	15	-0.137857
chr9	110727456	110727679	110727567	ENSG00000223918.1	-	processed_pseudogene	KNOWN	RP13-461N9.2	1	1	-0.029024
chr9	110873263	111038458	110955860	ENSG00000198121.13	-	protein_coding	KNOWN	LPAR1	5	6	0.018833
chr9	110903337	110903445	110903391	ENSG00000206923.1	+	snRNA	KNOWN	RNU6-432P	1	1	-0.120312
chr9	110934406	110934507	110934456	ENSG00000207401.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.052246
chr9	111097325	111097413	111097369	ENSG00000212409.1	-	misc_RNA	KNOWN	RNY4P18	1	1	-0.100653
chr9	111139246	111284836	111212041	ENSG00000227531.1	-	lincRNA	KNOWN	RP11-202G18.1	1	3	-0.109189
chr9	111271156	111271214	111271185	ENSG00000274263.1	-	miRNA	KNOWN	MIR7702	1	1	0.153721
chr9	111327483	111328520	111328001	ENSG00000171133.2	-	protein_coding	KNOWN	OR2K2	2	1	-0.325566
chr9	111360692	111484745	111422718	ENSG00000136813.14	-	protein_coding	KNOWN	KIAA0368	6	51	0.067442
chr9	111411644	111411742	111411693	ENSG00000223238.1	-	rRNA	KNOWN	RNA5SP294	1	1	0.193275
chr9	111525159	111577844	111551501	ENSG00000173258.12	+	protein_coding	KNOWN	ZNF483	4	6	0.041241
chr9	111549722	111599855	111574788	ENSG00000106853.16	-	protein_coding	KNOWN	PTGR1	9	10	0.021086
chr9	111574192	111575427	111574809	ENSG00000224644.1	+	antisense	KNOWN	RP11-16L21.7	1	2	0.100074
chr9	111602831	111631289	111617060	ENSG00000204173.10	-	transcribed_unprocessed_pseudogene	KNOWN	LRRC37A5P	3	3	0.262991
chr9	111631352	111654351	111642851	ENSG00000059769.19	+	protein_coding	KNOWN	DNAJC25	3	5	0.277684
chr9	111631386	111670229	111650807	ENSG00000244115.1	+	protein_coding	KNOWN	DNAJC25-GNG10	1	3	0.258911
chr9	111661335	111670246	111665790	ENSG00000242616.3	+	protein_coding	KNOWN	GNG10	1	3	0.230449
chr9	111686173	111795008	111740590	ENSG00000165181.16	-	protein_coding	KNOWN	C9orf84	5	26	-0.115356
chr9	111802980	111803435	111803207	ENSG00000224067.2	+	processed_pseudogene	KNOWN	RP11-430K21.2	1	2	-0.134284
chr9	111839828	111839934	111839881	ENSG00000206907.1	+	snRNA	KNOWN	RNU6-1013P	1	1	0.105798
chr9	111896766	111935369	111916067	ENSG00000148154.9	+	protein_coding	KNOWN	UGCG	5	9	0.149677
chr9	111932100	111932169	111932134	ENSG00000266315.1	+	miRNA	KNOWN	MIR4668	1	1	0.250895
chr9	111996635	111996739	111996687	ENSG00000222356.1	-	snRNA	KNOWN	RNU6-710P	1	1	0.069390
chr9	112032555	112037730	112035142	ENSG00000259953.1	-	sense_overlapping	KNOWN	RP11-4O1.2	3	2	0.398095
chr9	112040785	112175408	112108096	ENSG00000106868.16	-	protein_coding	KNOWN	SUSD1	10	18	0.215056
chr9	112137797	112137900	112137848	ENSG00000222327.1	+	snRNA	KNOWN	RNU6-855P	1	1	0.229495
chr9	112169286	112169397	112169341	ENSG00000200261.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.149873
chr9	112173522	112173971	112173746	ENSG00000225513.1	-	processed_pseudogene	KNOWN	RP11-165N19.2	1	1	0.258184
chr9	112217716	112333667	112275691	ENSG00000119314.15	-	protein_coding	KNOWN	PTBP3	8	15	0.019299
chr9	112242550	112242839	112242694	ENSG00000242256.3	-	misc_RNA	KNOWN	RN7SL57P	1	1	0.156122
chr9	112252258	112252378	112252318	ENSG00000199525.1	+	rRNA	KNOWN	RNA5SP295	1	1	0.082144
chr9	112272596	112272837	112272716	ENSG00000243911.3	-	misc_RNA	KNOWN	RN7SL430P	1	1	-0.301829
chr9	112280978	112281335	112281156	ENSG00000230081.2	-	processed_pseudogene	KNOWN	HSPE1P28	1	2	-0.301829
chr9	112362714	112363116	112362915	ENSG00000213529.3	+	processed_pseudogene	KNOWN	RP11-432F4.2	1	1	0.348332
chr9	112379937	112472410	112426173	ENSG00000119471.14	+	protein_coding	KNOWN	HSDL2	5	11	0.140631
chr9	112433816	112487204	112460510	ENSG00000230185.4	-	antisense	KNOWN	C9orf147	4	3	0.063925
chr9	112486847	112669397	112578122	ENSG00000165185.14	+	protein_coding	KNOWN	KIAA1958	3	5	0.053797
chr9	112581779	112582590	112582184	ENSG00000250068.1	-	unprocessed_pseudogene	KNOWN	RP11-576C12.1	1	3	0.124232
chr9	112683926	112718236	112701081	ENSG00000148153.13	-	protein_coding	KNOWN	INIP	6	6	0.117426
chr9	112748902	112750456	112749679	ENSG00000226609.1	-	antisense	KNOWN	RP11-276E15.4	1	2	0.253431
chr9	112750838	112881671	112816254	ENSG00000148158.16	+	protein_coding	KNOWN	SNX30	3	9	0.224822
chr9	112878920	112890913	112884916	ENSG00000119457.7	-	protein_coding	KNOWN	SLC46A2	2	4	0.088415
chr9	112885158	112885767	112885462	ENSG00000271631.1	+	antisense	KNOWN	RP11-408O19.5	1	1	0.078936
chr9	112959134	112962261	112960697	ENSG00000237906.1	-	unitary_pseudogene	KNOWN	MUPP	1	6	-0.123021
chr9	112997120	113050043	113023581	ENSG00000228623.3	-	lincRNA	KNOWN	ZNF883	2	5	-0.205282
chr9	113038380	113056759	113047569	ENSG00000136866.13	-	protein_coding	KNOWN	ZFP37	3	4	-0.319705
chr9	113103338	113111500	113107419	ENSG00000225684.3	-	lincRNA	KNOWN	FAM225B	2	3	0.226306
chr9	113113073	113119928	113116500	ENSG00000231528.2	+	lincRNA	KNOWN	FAM225A	2	3	0.153684
chr9	113150942	113164137	113157539	ENSG00000136867.10	+	protein_coding	KNOWN	SLC31A2	3	5	0.385491
chr9	113161006	113221361	113191183	ENSG00000119321.8	-	protein_coding	KNOWN	FKBP15	6	28	0.284521
chr9	113221562	113264492	113243027	ENSG00000136868.10	+	protein_coding	KNOWN	SLC31A1	2	5	0.101463
chr9	113255835	113275589	113265712	ENSG00000176386.8	-	protein_coding	KNOWN	CDC26	2	5	0.165123
chr9	113275343	113292905	113284124	ENSG00000136875.12	+	protein_coding	KNOWN	PRPF4	3	14	0.300635
chr9	113297093	113303376	113300234	ENSG00000165188.13	-	protein_coding	KNOWN	RNF183	7	5	0.149997
chr9	113313222	113340298	113326760	ENSG00000148225.15	-	protein_coding	KNOWN	WDR31	6	13	0.089101
chr9	113349541	113371233	113360387	ENSG00000119411.10	+	protein_coding	KNOWN	BSPRY	2	6	0.290119
chr9	113373419	113376999	113375209	ENSG00000119431.9	-	protein_coding	KNOWN	HDHD3	3	3	0.043357
chr9	113386317	113401333	113393825	ENSG00000148218.15	-	protein_coding	KNOWN	ALAD	9	12	0.323056
chr9	113407235	113410672	113408953	ENSG00000148229.12	-	protein_coding	KNOWN	POLE3	4	5	0.417746
chr9	113410054	113429684	113419869	ENSG00000157653.11	+	protein_coding	KNOWN	C9orf43	3	14	0.433460
chr9	113444731	113597743	113521237	ENSG00000138835.22	+	protein_coding	KNOWN	RGS3	32	26	0.438314
chr9	113570190	113590019	113580104	ENSG00000237073.1	-	antisense	KNOWN	RP11-168K11.2	1	3	0.798021
chr9	113614589	113617375	113615982	ENSG00000282897.1	-	TEC	KNOWN	RP11-168K11.5	1	1	0.737708
chr9	113619228	113622634	113620931	ENSG00000233817.1	+	lincRNA	KNOWN	RP11-168K11.3	1	2	0.737708
chr9	113650956	113682855	113666905	ENSG00000227482.1	+	lincRNA	KNOWN	RP11-18B16.2	1	3	0.459256
chr9	113758994	113759419	113759206	ENSG00000214669.3	-	processed_pseudogene	KNOWN	RP11-18B16.1	1	1	0.271626
chr9	113792358	113792439	113792398	ENSG00000211556.2	-	miRNA	NOVEL	AL157702.1	1	1	0.412359
chr9	113850687	113851632	113851159	ENSG00000232905.2	-	processed_pseudogene	KNOWN	RP11-534I8.1	1	1	-0.006923
chr9	113876282	114056591	113966436	ENSG00000157657.14	+	protein_coding	KNOWN	ZNF618	7	15	0.405426
chr9	114060127	114078472	114069299	ENSG00000106927.11	-	protein_coding	KNOWN	AMBP	4	10	0.486479
chr9	114086126	114099227	114092676	ENSG00000136883.12	-	protein_coding	KNOWN	KIF12	5	18	0.707199
chr9	114155560	114312511	114234035	ENSG00000196739.14	+	protein_coding	KNOWN	COL27A1	8	61	0.658266
chr9	114209417	114209526	114209471	ENSG00000207726.2	+	miRNA	KNOWN	MIR455	1	1	0.628591
chr9	114323056	114326475	114324765	ENSG00000229314.5	+	protein_coding	KNOWN	ORM1	2	6	0.655893
chr9	114329869	114333252	114331560	ENSG00000228278.3	+	protein_coding	KNOWN	ORM2	1	6	0.678514
chr9	114334156	114394405	114364280	ENSG00000106948.16	-	protein_coding	KNOWN	AKNA	9	22	0.783507
chr9	114396724	114398503	114397613	ENSG00000235119.1	-	lincRNA	KNOWN	RP11-9M16.2	1	2	0.760917
chr9	114402080	114505450	114453765	ENSG00000095397.13	-	protein_coding	KNOWN	DFNB31	5	12	0.488745
chr9	114491564	114491741	114491652	ENSG00000271214.1	+	processed_pseudogene	KNOWN	RP11-9M16.3	1	1	0.576071
chr9	114572901	114573371	114573136	ENSG00000235797.2	+	processed_pseudogene	KNOWN	RP11-402G3.6	1	1	0.433460
chr9	114587746	114598373	114593059	ENSG00000136888.6	+	protein_coding	KNOWN	ATP6V1G1	2	3	0.303269
chr9	114611206	114646422	114628814	ENSG00000157693.14	+	protein_coding	KNOWN	C9orf91	4	9	0.636138
chr9	114615455	114615568	114615511	ENSG00000201749.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.750652
chr9	114656304	114662374	114659339	ENSG00000230054.1	-	lincRNA	KNOWN	RP11-402G3.5	2	2	0.276075
chr9	114666434	114682089	114674261	ENSG00000230601.5	-	lincRNA	KNOWN	RP11-402G3.3	2	5	0.247959
chr9	114695922	114696315	114696118	ENSG00000230284.1	-	processed_pseudogene	KNOWN	RP11-402G3.4	1	1	0.213554
chr9	114774319	114774407	114774363	ENSG00000263546.2	-	miRNA	NOVEL	AL390240.1	1	1	0.147335
chr9	114774737	114775120	114774928	ENSG00000274919.1	-	processed_pseudogene	KNOWN	RP11-428F18.2	1	1	0.147335
chr9	114784635	114806126	114795380	ENSG00000181634.7	-	protein_coding	KNOWN	TNFSF15	2	4	0.077973
chr9	114845594	114848585	114847089	ENSG00000229817.1	+	processed_pseudogene	KNOWN	RP11-78H18.2	1	1	0.077565
chr9	114893343	114930595	114911969	ENSG00000106952.7	-	protein_coding	KNOWN	TNFSF8	3	5	0.248462
chr9	115019578	115118257	115068917	ENSG00000041982.15	-	protein_coding	KNOWN	TNC	14	28	0.025934
chr9	115119539	115138409	115128974	ENSG00000236461.1	-	lincRNA	KNOWN	RP11-523L1.2	1	6	-0.114369
chr9	115141818	115402644	115272231	ENSG00000173077.14	+	protein_coding	KNOWN	DEC1	4	8	-0.013355
chr9	115252538	115254251	115253394	ENSG00000234692.1	-	lincRNA	KNOWN	RP11-445L6.3	1	3	0.083059
chr9	115734392	115734491	115734441	ENSG00000274755.1	+	snRNA	NOVEL	U2	1	1	-0.202294
chr9	115739663	115744239	115741951	ENSG00000228714.2	-	lincRNA	KNOWN	RP11-284G10.1	1	3	-0.202294
chr9	115888169	115925207	115906688	ENSG00000204148.3	-	lincRNA	KNOWN	LINC00474	1	3	-0.226081
chr9	116012361	116012965	116012663	ENSG00000228707.1	+	lincRNA	KNOWN	RP11-787B4.2	1	2	-0.240278
chr9	116153804	116402322	116278063	ENSG00000182752.9	+	protein_coding	KNOWN	PAPPA	3	22	0.120309
chr9	116198990	116199079	116199034	ENSG00000221772.3	+	miRNA	NOVEL	AL353141.1	1	1	0.099897
chr9	116285829	116288769	116287299	ENSG00000226604.2	-	antisense	KNOWN	PAPPA-AS2	1	2	0.108386
chr9	116288618	116318689	116303653	ENSG00000244757.1	-	antisense	KNOWN	RP11-45A16.4	1	4	-0.009276
chr9	116393589	116393676	116393632	ENSG00000216182.1	-	miRNA	NOVEL	AL137024.1	1	1	0.265640
chr9	116398157	116400606	116399381	ENSG00000256040.2	-	antisense	KNOWN	PAPPA-AS1	1	1	0.265640
chr9	116425225	117415070	116920147	ENSG00000148219.16	-	protein_coding	KNOWN	ASTN2	8	23	-0.174289
chr9	116504283	116562293	116533288	ENSG00000229105.1	+	antisense	KNOWN	ASTN2-AS1	1	12	0.018631
chr9	116568449	116586328	116577388	ENSG00000230894.1	+	antisense	KNOWN	RP11-67K19.3	1	3	-0.018641
chr9	116687302	116701300	116694301	ENSG00000119401.10	+	protein_coding	KNOWN	TRIM32	3	3	-0.038652
chr9	117099007	117099106	117099056	ENSG00000265662.1	+	miRNA	NOVEL	AL354981.1	1	1	-0.270578
chr9	117180628	117181095	117180861	ENSG00000230734.1	-	processed_pseudogene	KNOWN	RPL10P3	1	1	-0.535406
chr9	117181066	117181200	117181133	ENSG00000207268.1	-	snoRNA	KNOWN	SNORA70C	1	1	-0.535406
chr9	117197118	117197420	117197269	ENSG00000201140.1	+	misc_RNA	KNOWN	RN7SKP128	1	1	-0.014317
chr9	117276985	117277286	117277135	ENSG00000222413.1	+	misc_RNA	KNOWN	RN7SKP125	1	1	-0.388001
chr9	117462294	117466260	117464277	ENSG00000233516.1	-	lincRNA	KNOWN	RP11-388N2.1	1	2	-0.626494
chr9	117648606	117657027	117652816	ENSG00000233569.1	+	lincRNA	KNOWN	RP11-500B12.1	1	6	-0.317016
chr9	117685254	117685588	117685421	ENSG00000235133.1	-	processed_pseudogene	KNOWN	RPL35AP22	1	1	-0.546410
chr9	117704332	117716871	117710601	ENSG00000136869.13	+	protein_coding	KNOWN	TLR4	4	4	-0.365603
chr9	117707996	117708102	117708049	ENSG00000201444.1	-	snRNA	KNOWN	RNU6-1082P	1	1	-0.276048
chr9	117783448	117868071	117825759	ENSG00000228512.2	+	lincRNA	KNOWN	RP11-281A20.2	1	3	-0.425042
chr9	117840322	117897256	117868789	ENSG00000231901.1	-	lincRNA	KNOWN	RP11-281A20.1	1	4	-0.528940
chr9	118082869	118083382	118083125	ENSG00000234782.3	-	processed_pseudogene	KNOWN	TPT1P9	1	1	-0.388898
chr9	118687752	118705960	118696856	ENSG00000225050.1	-	lincRNA	KNOWN	RP11-349E4.1	1	2	-0.414354
chr9	118740563	118745312	118742937	ENSG00000235201.1	+	lincRNA	KNOWN	RP11-127L21.1	1	2	-0.372849
chr9	118763867	118764345	118764106	ENSG00000231166.2	+	processed_pseudogene	KNOWN	TUBB4BP6	1	1	-0.192889
chr9	119153458	119369467	119261462	ENSG00000078725.12	-	protein_coding	KNOWN	BRINP1	3	8	-0.362701
chr9	119495375	119524125	119509750	ENSG00000260970.1	+	lincRNA	KNOWN	RP11-295D22.1	1	3	-0.347589
chr9	119511669	119511760	119511714	ENSG00000276419.1	+	miRNA	NOVEL	AC006288.1	1	1	-0.401340
chr9	119884947	119885056	119885001	ENSG00000281143.1	+	miRNA	NOVEL	AL354931.1	1	1	-0.256618
chr9	119935053	119937832	119936442	ENSG00000261432.1	+	lincRNA	KNOWN	LINC01613	1	1	-0.132975
chr9	119973094	119974322	119973708	ENSG00000225960.1	+	lincRNA	KNOWN	RP11-360A18.1	1	3	0.336096
chr9	120244979	120245050	120245014	ENSG00000207814.1	-	miRNA	KNOWN	MIR147A	1	1	-0.271599
chr9	120302782	120302882	120302832	ENSG00000280558.1	-	miRNA	NOVEL	AL592549.1	1	1	-0.068004
chr9	120388869	120580170	120484519	ENSG00000136861.17	-	protein_coding	KNOWN	CDK5RAP2	19	39	0.071288
chr9	120600813	120714470	120657641	ENSG00000106780.8	-	protein_coding	KNOWN	MEGF9	1	6	-0.135518
chr9	120720673	120721972	120721322	ENSG00000238181.2	+	processed_pseudogene	KNOWN	AHCYP2	1	1	-0.036332
chr9	120751978	120793412	120772695	ENSG00000119402.16	-	protein_coding	KNOWN	FBXW2	5	8	0.100027
chr9	120793551	120799570	120796560	ENSG00000214654.6	+	transcribed_processed_pseudogene	KNOWN	RP11-27I1.4	2	2	0.083430
chr9	120812475	120812845	120812660	ENSG00000270917.1	-	processed_pseudogene	KNOWN	RP11-27I1.6	1	1	-0.036332
chr9	120815496	120842984	120829240	ENSG00000095261.13	-	protein_coding	KNOWN	PSMD5	8	10	0.052943
chr9	120824828	120854385	120839606	ENSG00000226752.7	+	antisense	KNOWN	PSMD5-AS1	16	5	0.160701
chr9	120855652	120894896	120875274	ENSG00000119403.13	-	protein_coding	KNOWN	PHF19	14	15	0.637616
chr9	120902393	120929173	120915783	ENSG00000056558.10	-	protein_coding	KNOWN	TRAF1	3	9	0.373028
chr9	120952335	121050276	121001305	ENSG00000106804.7	-	protein_coding	KNOWN	C5	5	41	0.017344
chr9	121074863	121177610	121126236	ENSG00000119397.16	+	protein_coding	KNOWN	CNTRL	12	44	-0.059663
chr9	121178137	121223014	121200575	ENSG00000119396.10	-	protein_coding	KNOWN	RAB14	2	9	-0.083069
chr9	121203159	121203435	121203297	ENSG00000243738.3	+	misc_RNA	KNOWN	RN7SL181P	1	1	-0.347920
chr9	121207794	121332843	121270318	ENSG00000148180.17	+	protein_coding	KNOWN	GSN	20	25	0.435657
chr9	121238117	121240089	121239103	ENSG00000214651.4	-	processed_pseudogene	KNOWN	RP11-477J21.2	1	2	0.013989
chr9	121279863	121282730	121281296	ENSG00000239593.1	-	antisense	KNOWN	RP11-477J21.6	1	2	0.875054
chr9	121280768	121285530	121283149	ENSG00000235865.2	-	antisense	KNOWN	GSN-AS1	1	1	0.875054
chr9	121338988	121370304	121354646	ENSG00000148175.12	-	protein_coding	KNOWN	STOM	3	7	0.334186
chr9	121375241	121452177	121413709	ENSG00000227355.1	+	antisense	KNOWN	RP11-162D16.2	1	3	-0.018096
chr9	121444991	121500027	121472509	ENSG00000204136.10	-	unitary_pseudogene	KNOWN	GGTA1P	5	8	0.286884
chr9	121494519	121494821	121494670	ENSG00000240299.3	+	misc_RNA	KNOWN	RN7SL187P	1	1	0.357582
chr9	121519816	121520424	121520120	ENSG00000213467.4	-	processed_pseudogene	KNOWN	HMGB1P37	1	1	0.220822
chr9	121539876	121539962	121539919	ENSG00000252940.2	+	miRNA	NOVEL	AL357936.1	1	1	0.115324
chr9	121567057	121785530	121676293	ENSG00000136848.16	+	protein_coding	KNOWN	DAB2IP	10	17	0.487053
chr9	121574891	121576214	121575552	ENSG00000229854.1	-	antisense	KNOWN	RP11-524G24.2	1	2	0.573228
chr9	121790455	121790522	121790488	ENSG00000274557.1	-	miRNA	NOVEL	AL365274.1	1	1	0.446275
chr9	121815674	121819452	121817563	ENSG00000261534.1	-	sense_overlapping	KNOWN	RP11-244O19.1	1	1	0.451988
chr9	121821928	122093606	121957767	ENSG00000175764.14	-	protein_coding	KNOWN	TTLL11	6	9	0.333788
chr9	121884636	121963719	121924177	ENSG00000237548.1	-	lincRNA	KNOWN	TTLL11-IT1	1	2	0.350295
chr9	122120082	122120167	122120124	ENSG00000266583.1	-	miRNA	KNOWN	MIR4478	1	1	0.530488
chr9	122144058	122159819	122151938	ENSG00000119421.6	-	protein_coding	KNOWN	NDUFA8	1	4	0.324295
chr9	122159908	122200088	122179998	ENSG00000185681.12	+	protein_coding	KNOWN	MORN5	5	5	0.196651
chr9	122202577	122229626	122216101	ENSG00000106852.15	-	protein_coding	KNOWN	LHX6	12	10	0.299168
chr9	122237624	122264839	122251231	ENSG00000119446.13	-	protein_coding	KNOWN	RBM18	3	7	0.176991
chr9	122264603	122331343	122297973	ENSG00000148187.17	+	protein_coding	KNOWN	MRRF	12	9	0.295376
chr9	122370530	122395703	122383116	ENSG00000095303.14	+	protein_coding	KNOWN	PTGS1	7	12	0.564105
chr9	122372605	122372825	122372715	ENSG00000269970.1	+	sense_intronic	KNOWN	RP11-498E2.9	1	1	0.643129
chr9	122400970	122402906	122401938	ENSG00000233616.2	-	lincRNA	KNOWN	RP11-542K23.10	1	2	0.294381
chr9	122403407	122448977	122426192	ENSG00000229245.2	+	antisense	KNOWN	RP11-542K23.7	1	6	-0.001901
chr9	122471358	122475817	122473587	ENSG00000231465.2	+	antisense	KNOWN	RP11-542K23.9	1	3	-0.069472
chr9	122476958	122477926	122477442	ENSG00000136834.3	-	protein_coding	KNOWN	OR1J1	1	1	-0.069472
chr9	122510802	122511743	122511272	ENSG00000197233.7	+	protein_coding	KNOWN	OR1J2	1	1	-0.054850
chr9	122519141	122520082	122519611	ENSG00000239590.1	+	protein_coding	KNOWN	OR1J4	1	1	-0.054850
chr9	122526358	122527296	122526827	ENSG00000171505.5	-	protein_coding	KNOWN	OR1N1	2	1	-0.054850
chr9	122553112	122555173	122554142	ENSG00000171501.8	+	protein_coding	KNOWN	OR1N2	2	2	-0.422581
chr9	122567548	122568477	122568012	ENSG00000171496.3	-	protein_coding	KNOWN	OR1L8	1	1	-0.422581
chr9	122608036	122608800	122608418	ENSG00000228914.1	+	unprocessed_pseudogene	KNOWN	OR1H1P	1	1	-0.602118
chr9	122609915	122639685	122624800	ENSG00000234156.1	+	antisense	KNOWN	RP11-64P14.7	2	4	-0.387014
chr9	122614738	122615682	122615210	ENSG00000165202.3	+	protein_coding	KNOWN	OR1Q1	1	1	-0.424406
chr9	122628579	122629535	122629057	ENSG00000171484.4	-	protein_coding	KNOWN	OR1B1	1	1	-0.424406
chr9	122628579	122629573	122629076	ENSG00000280094.1	-	polymorphic_pseudogene	KNOWN	OR1B1	2	1	-0.424406
chr9	122661566	122662648	122662107	ENSG00000173679.2	+	protein_coding	KNOWN	OR1L1	2	1	-0.222389
chr9	122675130	122676104	122675617	ENSG00000171481.3	+	protein_coding	KNOWN	OR1L3	1	1	-0.432923
chr9	122685933	122688372	122687152	ENSG00000226783.1	+	processed_pseudogene	KNOWN	TLK1P1	1	1	-0.432923
chr9	122723990	122724925	122724457	ENSG00000136939.1	+	protein_coding	KNOWN	OR1L4	1	1	-0.133301
chr9	122749740	122750783	122750261	ENSG00000171459.3	+	protein_coding	KNOWN	OR1L6	2	1	-0.269615
chr9	122761844	122762233	122762038	ENSG00000232387.2	+	processed_pseudogene	KNOWN	SKA2P1	1	1	-0.190647
chr9	122788933	122789895	122789414	ENSG00000148215.4	+	protein_coding	KNOWN	OR5C1	1	1	-0.119512
chr9	122798389	122828631	122813510	ENSG00000136940.13	-	protein_coding	KNOWN	PDCL	3	4	0.240476
chr9	122800123	122801073	122800598	ENSG00000165204.3	+	protein_coding	KNOWN	OR1K1	1	1	0.260869
chr9	122837557	122838820	122838188	ENSG00000233425.1	+	processed_pseudogene	KNOWN	KRT18P67	1	1	0.099645
chr9	122844556	122905341	122874948	ENSG00000056586.15	-	protein_coding	KNOWN	RC3H2	10	22	-0.038755
chr9	122880213	122880323	122880268	ENSG00000212447.1	-	snoRNA	KNOWN	SNORD90	1	1	0.005577
chr9	122908056	122913330	122910693	ENSG00000186130.4	-	protein_coding	KNOWN	ZBTB6	1	2	0.020668
chr9	122915566	122931500	122923533	ENSG00000171448.8	-	protein_coding	KNOWN	ZBTB26	2	2	0.078398
chr9	122937623	122940333	122938978	ENSG00000261094.2	+	sense_overlapping	KNOWN	RP11-355O1.11	2	2	0.125544
chr9	122940833	123104866	123022849	ENSG00000011454.16	+	protein_coding	KNOWN	RABGAP1	13	28	-0.141728
chr9	122945988	122946094	122946041	ENSG00000222351.1	-	misc_RNA	KNOWN	RNY1P15	1	1	0.125544
chr9	123029373	123029753	123029563	ENSG00000213216.2	-	processed_pseudogene	KNOWN	RP11-355O1.7	1	1	0.006824
chr9	123034527	123035696	123035111	ENSG00000188394.6	+	protein_coding	KNOWN	GPR21	1	1	-0.155389
chr9	123061845	123063312	123062578	ENSG00000225078.2	-	processed_pseudogene	KNOWN	RP11-123N4.4	1	3	-0.057386
chr9	123109494	123115477	123112485	ENSG00000236901.4	-	sense_intronic	KNOWN	MIR600HG	2	1	0.133072
chr9	123109500	123268576	123189038	ENSG00000165209.18	-	protein_coding	KNOWN	STRBP	10	19	-0.317699
chr9	123111546	123111643	123111594	ENSG00000274325.1	-	miRNA	KNOWN	MIR600	1	1	0.162726
chr9	123356170	123380324	123368247	ENSG00000148204.11	+	protein_coding	KNOWN	CRB2	3	13	0.507390
chr9	123379654	123930152	123654903	ENSG00000119522.15	-	protein_coding	KNOWN	DENND1A	13	22	0.111812
chr9	123402525	123402603	123402564	ENSG00000207991.1	-	miRNA	KNOWN	MIR601	1	1	0.168123
chr9	123485529	123485622	123485575	ENSG00000274932.1	-	miRNA	KNOWN	MIR7150	1	1	0.230890
chr9	123491884	123493156	123492520	ENSG00000237336.1	+	antisense	KNOWN	RP11-230L22.4	1	2	0.326047
chr9	123585384	123585457	123585420	ENSG00000222722.1	-	miRNA	NOVEL	AL161790.1	1	1	-0.101733
chr9	123736437	123751941	123744189	ENSG00000230826.1	+	antisense	KNOWN	RP11-417B4.2	1	2	-0.035509
chr9	123759220	123759775	123759497	ENSG00000229115.1	+	processed_pseudogene	KNOWN	RP11-417B4.3	1	2	-0.076984
chr9	123842422	123842479	123842450	ENSG00000281130.1	+	snRNA	NOVEL	U7	1	1	0.091992
chr9	123843036	123843686	123843361	ENSG00000234881.1	+	processed_pseudogene	KNOWN	PIGFP2	1	1	0.091992
chr9	124001670	124033301	124017485	ENSG00000106689.10	+	protein_coding	KNOWN	LHX2	4	5	0.334791
chr9	124006277	124009396	124007836	ENSG00000236668.2	-	antisense	KNOWN	RP11-85O21.2	1	2	0.031450
chr9	124010530	124011114	124010822	ENSG00000231227.1	+	sense_overlapping	KNOWN	RP11-85O21.4	1	2	0.472472
chr9	124031624	124032524	124032074	ENSG00000234921.1	-	antisense	KNOWN	RP11-85O21.5	1	3	0.266021
chr9	124257606	124353307	124305456	ENSG00000119408.16	+	protein_coding	KNOWN	NEK6	15	11	0.688481
chr9	124259250	124261156	124260203	ENSG00000235204.1	-	antisense	KNOWN	RP11-121A14.2	1	2	0.317995
chr9	124262876	124265809	124264342	ENSG00000227200.1	+	sense_intronic	KNOWN	RP11-121A14.3	1	2	0.317995
chr9	124353466	124415444	124384455	ENSG00000136930.12	-	protein_coding	KNOWN	PSMB7	6	8	0.165808
chr9	124451600	124478589	124465094	ENSG00000180264.10	+	protein_coding	KNOWN	ADGRD2	4	22	0.504395
chr9	124481236	124507430	124494333	ENSG00000136931.9	-	protein_coding	KNOWN	NR5A1	4	7	0.578781
chr9	124514938	124516056	124515497	ENSG00000231149.2	-	lincRNA	KNOWN	RP11-10J18.3	1	2	0.594492
chr9	124517275	124771310	124644292	ENSG00000148200.16	-	protein_coding	KNOWN	NR6A1	5	10	0.139091
chr9	124598707	124599580	124599143	ENSG00000231744.1	-	processed_pseudogene	KNOWN	RP11-164H5.1	1	2	0.084214
chr9	124607159	124607458	124607308	ENSG00000241246.3	+	misc_RNA	KNOWN	RN7SL302P	1	1	0.084214
chr9	124658467	124698631	124678549	ENSG00000224020.1	+	antisense	KNOWN	MIR181A2HG	1	2	0.041872
chr9	124692442	124692551	124692496	ENSG00000207595.1	+	miRNA	KNOWN	MIR181A2	1	1	0.122365
chr9	124693710	124693798	124693754	ENSG00000207737.1	+	miRNA	KNOWN	MIR181B2	1	1	0.122365
chr9	124770123	124772927	124771525	ENSG00000236643.1	+	antisense	KNOWN	RP11-175D17.3	1	3	0.583172
chr9	124777158	124814885	124796021	ENSG00000185585.19	+	protein_coding	KNOWN	OLFML2A	3	8	0.659947
chr9	124853417	124857890	124855653	ENSG00000136918.7	+	protein_coding	KNOWN	WDR38	3	9	0.832676
chr9	124857880	124861981	124859930	ENSG00000136942.14	-	protein_coding	KNOWN	RPL35	6	5	0.832676
chr9	124862130	124877733	124869931	ENSG00000136950.13	+	protein_coding	KNOWN	ARPC5L	3	6	0.799444
chr9	124878357	124948492	124913424	ENSG00000136935.13	-	protein_coding	KNOWN	GOLGA1	6	23	0.375034
chr9	124887410	124887549	124887479	ENSG00000199313.1	-	snRNA	KNOWN	RNU4-82P	1	1	0.765631
chr9	124896833	124896932	124896882	ENSG00000264641.1	+	miRNA	NOVEL	AL354928.1	1	1	0.410942
chr9	124942608	125143506	125043057	ENSG00000173611.17	-	protein_coding	KNOWN	SCAI	7	19	0.230948
chr9	124968294	124968840	124968567	ENSG00000177736.4	-	processed_pseudogene	KNOWN	FXNP2	1	1	0.023279
chr9	125146573	125189939	125168256	ENSG00000119414.11	-	protein_coding	KNOWN	PPP6C	4	8	0.204242
chr9	125150653	125151589	125151121	ENSG00000232630.1	+	processed_pseudogene	KNOWN	PRPS1P2	1	1	0.037836
chr9	125194649	125195821	125195235	ENSG00000235332.2	-	processed_pseudogene	KNOWN	RPSAP76	1	2	0.509354
chr9	125200542	125234158	125217350	ENSG00000136933.16	+	protein_coding	KNOWN	RABEPK	6	10	0.553602
chr9	125234853	125241330	125238091	ENSG00000044574.7	-	protein_coding	KNOWN	HSPA5	1	8	0.701407
chr9	125241663	125257018	125249340	ENSG00000239705.1	+	antisense	KNOWN	RP11-65N13.8	1	3	0.711853
chr9	125261794	125367207	125314500	ENSG00000165219.21	+	protein_coding	KNOWN	GAPVD1	20	28	0.445986
chr9	125263845	125264090	125263967	ENSG00000214593.3	-	processed_pseudogene	KNOWN	RP11-65N13.6	1	1	0.724260
chr9	125303920	125304026	125303973	ENSG00000200554.1	-	snRNA	KNOWN	RNU6-1020P	1	1	0.482174
chr9	125372325	125372766	125372545	ENSG00000227845.2	-	processed_pseudogene	KNOWN	RP11-184B22.2	1	1	0.232313
chr9	125417305	125417586	125417445	ENSG00000274510.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.555299
chr9	125437393	125707234	125572313	ENSG00000119487.16	-	protein_coding	KNOWN	MAPKAP1	20	12	0.226190
chr9	125512902	125513207	125513054	ENSG00000243845.3	-	misc_RNA	KNOWN	RN7SL30P	1	1	0.029595
chr9	125567579	125573023	125570301	ENSG00000227068.1	+	antisense	KNOWN	RP11-12A16.3	1	3	0.402498
chr9	125595669	125596628	125596148	ENSG00000214761.3	+	processed_pseudogene	KNOWN	HNRNPA1P15	1	1	0.060108
chr9	125743754	125746552	125745153	ENSG00000229582.3	-	processed_transcript	KNOWN	RP11-423C15.3	3	2	-0.037776
chr9	125747345	125967377	125857361	ENSG00000167081.16	+	protein_coding	KNOWN	PBX3	12	10	-0.171147
chr9	126057580	126159613	126108596	ENSG00000232413.1	+	lincRNA	KNOWN	RP11-343J18.2	1	2	0.307807
chr9	126270121	126275918	126273019	ENSG00000228392.1	-	lincRNA	KNOWN	RP11-343J18.1	1	3	-0.175489
chr9	126326849	126507041	126416945	ENSG00000196814.14	+	protein_coding	KNOWN	MVB12B	6	10	0.260466
chr9	126408041	126408410	126408225	ENSG00000253079.1	-	misc_RNA	KNOWN	NRON	1	1	0.172365
chr9	126426893	126426970	126426931	ENSG00000252985.1	+	snoRNA	NOVEL	SNORD116	1	1	0.259343
chr9	126516417	126518808	126517612	ENSG00000233721.1	+	lincRNA	KNOWN	RP11-205K6.1	1	2	0.550722
chr9	126518840	126520773	126519806	ENSG00000279137.1	+	TEC	KNOWN	RP11-205K6.3	1	1	0.550722
chr9	126527618	126530343	126528980	ENSG00000226078.1	+	lincRNA	KNOWN	RP11-205K6.2	1	2	0.529773
chr9	126530915	126530991	126530953	ENSG00000221768.1	-	miRNA	NOVEL	AL356309.1	1	1	0.384774
chr9	126576530	126576630	126576580	ENSG00000221173.1	-	miRNA	NOVEL	AL161908.1	1	1	0.191527
chr9	126589594	126613700	126601647	ENSG00000224842.2	-	antisense	KNOWN	RP11-123K19.1	3	3	0.345285
chr9	126614443	126701032	126657737	ENSG00000136944.17	+	protein_coding	KNOWN	LMX1B	4	8	0.631557
chr9	126640756	126641293	126641024	ENSG00000238010.1	+	sense_intronic	KNOWN	RP11-123K19.2	1	2	0.474239
chr9	126718243	126718333	126718288	ENSG00000266403.1	-	miRNA	NOVEL	AL161731.1	1	1	0.197786
chr9	126805006	126838210	126821608	ENSG00000169155.9	+	protein_coding	KNOWN	ZBTB43	5	3	0.303019
chr9	126860665	126885878	126873271	ENSG00000177125.5	+	protein_coding	KNOWN	ZBTB34	2	2	0.498665
chr9	126914774	127223166	127068970	ENSG00000136828.18	+	protein_coding	KNOWN	RALGPS1	14	19	0.473492
chr9	127087332	127122883	127105107	ENSG00000136859.9	-	protein_coding	KNOWN	ANGPTL2	4	5	0.629815
chr9	127213783	127221907	127217845	ENSG00000228487.2	-	antisense	KNOWN	RP13-225O21.2	2	3	0.669900
chr9	127224265	127393660	127308962	ENSG00000136895.18	+	protein_coding	KNOWN	GARNL3	22	29	0.406542
chr9	127300093	127300982	127300537	ENSG00000229369.1	-	processed_pseudogene	KNOWN	RP13-225O21.5	1	2	0.249994
chr9	127366770	127367397	127367083	ENSG00000271833.1	+	sense_intronic	KNOWN	RP11-356B19.11	1	1	0.594946
chr9	127397138	127408424	127402781	ENSG00000136856.17	+	protein_coding	KNOWN	SLC2A8	15	10	0.532564
chr9	127424374	127445372	127434873	ENSG00000196152.10	+	protein_coding	KNOWN	ZNF79	4	6	0.873138
chr9	127447674	127451405	127449539	ENSG00000197958.12	-	protein_coding	KNOWN	RPL12	5	7	0.951162
chr9	127448501	127448630	127448565	ENSG00000201302.1	-	snoRNA	KNOWN	SNORA65	1	1	0.842239
chr9	127451486	127503501	127477493	ENSG00000148356.13	+	protein_coding	KNOWN	LRSAM1	9	26	0.952102
chr9	127470875	127470987	127470931	ENSG00000200788.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.595839
chr9	127505339	127578989	127542164	ENSG00000136830.11	-	protein_coding	KNOWN	FAM129B	7	14	1.285563
chr9	127611760	127692936	127652348	ENSG00000136854.17	+	protein_coding	KNOWN	STXBP1	13	20	0.779925
chr9	127690098	127690840	127690469	ENSG00000279571.1	-	lincRNA	KNOWN	RP11-56D16.8	1	1	0.902721
chr9	127690687	127690795	127690741	ENSG00000264329.1	-	miRNA	KNOWN	MIR3911	1	1	0.902721
chr9	127692978	127724873	127708925	ENSG00000187024.13	-	protein_coding	KNOWN	PTRH1	8	6	1.135485
chr9	127706989	127716002	127711495	ENSG00000160401.14	+	protein_coding	KNOWN	CFAP157	6	9	1.235158
chr9	127716066	127731600	127723833	ENSG00000167094.15	+	protein_coding	KNOWN	TTC16	3	14	1.368193
chr9	127731524	127735317	127733420	ENSG00000160404.17	-	protein_coding	KNOWN	TOR2A	9	5	1.075313
chr9	127738317	127778741	127758529	ENSG00000095370.19	-	protein_coding	KNOWN	SH2D3C	13	12	1.058068
chr9	127742855	127743407	127743131	ENSG00000279363.1	+	protein_coding	KNOWN	AL162426.1	1	2	1.075313
chr9	127785679	127790787	127788233	ENSG00000136807.11	+	protein_coding	KNOWN	CDK9	5	7	1.042763
chr9	127785833	127785923	127785878	ENSG00000266070.1	+	miRNA	KNOWN	MIR3960	1	1	1.025266
chr9	127785836	127785905	127785870	ENSG00000281546.1	+	miRNA	NOVEL	AL162586.1	1	1	1.025266
chr9	127794597	127814327	127804462	ENSG00000136877.14	+	protein_coding	KNOWN	FPGS	21	15	1.196986
chr9	127815012	127854756	127834884	ENSG00000106991.13	-	protein_coding	KNOWN	ENG	5	15	1.248622
chr9	127816066	127822520	127819293	ENSG00000225032.5	+	antisense	KNOWN	RP11-228B15.4	2	6	1.404460
chr9	127832635	127832743	127832689	ENSG00000222421.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.172912
chr9	127833951	127834042	127833996	ENSG00000280697.1	-	misc_RNA	NOVEL	Y_RNA	1	1	1.172912
chr9	127841112	127841222	127841167	ENSG00000222455.1	-	rRNA	KNOWN	RNA5SP296	1	1	1.172912
chr9	127866480	127877743	127872111	ENSG00000106992.17	-	protein_coding	KNOWN	AK1	6	7	1.295362
chr9	127867864	127886787	127877325	ENSG00000257524.5	-	processed_transcript	KNOWN	RP11-203J24.9	2	8	1.359058
chr9	127869415	127869495	127869455	ENSG00000263979.1	-	miRNA	KNOWN	MIR4672	1	1	1.075962
chr9	127885321	127905408	127895364	ENSG00000160408.14	-	protein_coding	KNOWN	ST6GALNAC6	16	7	1.143099
chr9	127907886	127917038	127912462	ENSG00000136840.18	-	protein_coding	KNOWN	ST6GALNAC4	7	6	1.001901
chr9	127920879	127930797	127925838	ENSG00000167103.11	-	protein_coding	KNOWN	PIP5KL1	12	10	1.006499
chr9	127934503	127940952	127937727	ENSG00000227218.7	+	antisense	KNOWN	RP11-203J24.8	9	4	1.281026
chr9	127935099	127938484	127936791	ENSG00000136908.17	-	protein_coding	KNOWN	DPM2	5	4	1.281026
chr9	127940579	127980513	127960546	ENSG00000167106.11	-	protein_coding	KNOWN	FAM102A	7	11	1.095285
chr9	128039135	128057362	128048248	ENSG00000230848.1	-	antisense	KNOWN	RP11-379C10.1	1	2	1.039473
chr9	128061233	128068206	128064719	ENSG00000171169.8	-	protein_coding	KNOWN	NAIF1	4	2	0.985077
chr9	128068201	128109245	128088723	ENSG00000148339.12	+	protein_coding	KNOWN	SLC25A25	8	11	0.938338
chr9	128090969	128094457	128092713	ENSG00000230536.1	-	antisense	KNOWN	RP11-379C10.4	1	2	0.954910
chr9	128108581	128118693	128113637	ENSG00000234771.3	-	antisense	KNOWN	SLC25A25-AS1	1	5	1.043753
chr9	128120693	128128462	128124577	ENSG00000148334.14	-	protein_coding	KNOWN	PTGES2	14	8	1.058243
chr9	128128529	128130628	128129578	ENSG00000232850.3	+	lincRNA	KNOWN	PTGES2-AS1	1	1	1.078650
chr9	128149071	128153455	128151263	ENSG00000148346.11	+	protein_coding	KNOWN	LCN2	7	7	1.082612
chr9	128160260	128163928	128162094	ENSG00000171159.4	+	protein_coding	KNOWN	C9orf16	4	3	1.070869
chr9	128165104	128165375	128165239	ENSG00000281669.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.070869
chr9	128166064	128204383	128185223	ENSG00000148337.20	-	protein_coding	KNOWN	CIZ1	28	20	1.034242
chr9	128203352	128255248	128229300	ENSG00000106976.19	+	protein_coding	KNOWN	DNM1	16	23	1.056527
chr9	128244721	128244830	128244775	ENSG00000207581.1	-	miRNA	KNOWN	MIR199B	1	1	1.031280
chr9	128244936	128245047	128244991	ENSG00000264823.2	-	miRNA	NOVEL	AL590708.2	1	1	1.031280
chr9	128255829	128275995	128265912	ENSG00000167110.16	-	protein_coding	KNOWN	GOLGA2	14	26	1.295957
chr9	128257707	128257789	128257748	ENSG00000221297.1	-	miRNA	NOVEL	AL590708.1	1	1	1.318127
chr9	128258709	128258955	128258832	ENSG00000280459.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.318127
chr9	128260749	128260817	128260783	ENSG00000274982.1	-	miRNA	NOVEL	AL590708.3	1	1	1.318127
chr9	128275379	128288990	128282184	ENSG00000175854.11	+	protein_coding	KNOWN	SWI5	6	6	1.243563
chr9	128305161	128322742	128313951	ENSG00000167112.9	-	protein_coding	KNOWN	TRUB2	3	9	1.016145
chr9	128314614	128314876	128314745	ENSG00000281892.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.029776
chr9	128316337	128316909	128316623	ENSG00000272696.1	+	antisense	KNOWN	RP11-339B21.13	1	1	1.029776
chr9	128322536	128334072	128328304	ENSG00000167113.10	+	protein_coding	KNOWN	COQ4	5	7	0.997759
chr9	128340646	128361470	128351058	ENSG00000167114.12	+	protein_coding	KNOWN	SLC27A4	2	13	1.131114
chr9	128342153	128342770	128342461	ENSG00000223551.1	+	processed_pseudogene	KNOWN	TMSB4XP4	1	1	0.939093
chr9	128371319	128392016	128381667	ENSG00000167118.10	+	protein_coding	KNOWN	URM1	6	5	0.958720
chr9	128391461	128392016	128391738	ENSG00000272593.1	+	lincRNA	KNOWN	RP11-339B21.11	1	1	1.044686
chr9	128392007	128393510	128392758	ENSG00000207955.3	-	lincRNA	KNOWN	MIR219A2	1	1	1.044686
chr9	128392618	128392714	128392666	ENSG00000273685.1	-	miRNA	KNOWN	MIR219B	1	1	1.044686
chr9	128411751	128437351	128424551	ENSG00000167123.18	+	protein_coding	KNOWN	CERCAM	14	14	1.011486
chr9	128431598	128432006	128431802	ENSG00000273186.1	+	sense_intronic	KNOWN	RP11-339B21.10	1	1	1.184324
chr9	128444587	128446628	128445607	ENSG00000228510.2	+	processed_pseudogene	KNOWN	RP11-339B21.8	1	2	1.184324
chr9	128455186	128501292	128478239	ENSG00000136811.16	+	protein_coding	KNOWN	ODF2	20	23	1.008093
chr9	128468957	128473012	128470984	ENSG00000225951.1	-	antisense	KNOWN	ODF2-AS1	1	2	0.986156
chr9	128476905	128476996	128476950	ENSG00000264891.1	+	miRNA	NOVEL	AL359091.1	1	1	0.923115
chr9	128504700	128542288	128523494	ENSG00000119392.14	+	protein_coding	KNOWN	GLE1	3	16	0.995020
chr9	128528901	128552410	128540655	ENSG00000228395.1	-	antisense	KNOWN	RP11-216B9.6	2	4	0.958488
chr9	128543916	128543977	128543946	ENSG00000238406.1	+	snRNA	KNOWN	RNU7-171P	1	1	0.946899
chr9	128552558	128633662	128593110	ENSG00000197694.13	+	protein_coding	KNOWN	SPTAN1	26	57	1.085980
chr9	128595893	128596633	128596263	ENSG00000280474.1	+	sense_intronic	KNOWN	RP11-216B9.8	1	2	1.140901
chr9	128630328	128631685	128631006	ENSG00000280758.1	-	antisense	KNOWN	RP11-216B9.9	1	2	1.137664
chr9	128633661	128656787	128645224	ENSG00000119333.11	-	protein_coding	KNOWN	WDR34	6	9	1.150105
chr9	128650998	128652145	128651571	ENSG00000227759.2	+	processed_pseudogene	KNOWN	VTI1BP4	1	3	1.180048
chr9	128663134	128663578	128663356	ENSG00000234705.1	-	antisense	KNOWN	HMGA1P4	1	2	1.180048
chr9	128683424	128696400	128689912	ENSG00000119335.16	+	protein_coding	KNOWN	SET	11	8	1.042650
chr9	128702523	128720918	128711720	ENSG00000160447.6	+	protein_coding	KNOWN	PKN3	3	22	1.166361
chr9	128709780	128710043	128709911	ENSG00000264438.2	+	misc_RNA	KNOWN	RN7SL560P	1	1	1.101950
chr9	128720869	128724127	128722498	ENSG00000160446.18	-	protein_coding	KNOWN	ZDHHC12	5	5	1.227769
chr9	128724445	128733194	128728819	ENSG00000223478.1	+	antisense	KNOWN	RP11-545E17.3	1	2	1.161668
chr9	128729786	128772414	128751100	ENSG00000160445.10	-	protein_coding	KNOWN	ZER1	4	16	0.978689
chr9	128745857	128746138	128745997	ENSG00000203286.5	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.046763
chr9	128787204	128810432	128798818	ENSG00000107021.15	+	protein_coding	KNOWN	TBC1D13	4	12	1.142876
chr9	128818474	128822677	128820575	ENSG00000167136.6	+	protein_coding	KNOWN	ENDOG	1	3	1.068224
chr9	128819651	128829821	128824736	ENSG00000198917.11	-	protein_coding	KNOWN	C9orf114	6	16	1.068224
chr9	128832942	128882494	128857718	ENSG00000171097.13	-	protein_coding	KNOWN	CCBL1	10	15	1.031639
chr9	128882112	128918039	128900075	ENSG00000136802.11	+	protein_coding	KNOWN	LRRC8A	5	4	1.063520
chr9	128920895	128942041	128931468	ENSG00000175287.18	+	protein_coding	KNOWN	PHYHD1	13	14	0.893830
chr9	128941478	128957021	128949249	ENSG00000251184.1	+	protein_coding	KNOWN	RP11-101E3.5	1	5	0.745956
chr9	128945530	128947619	128946574	ENSG00000175283.7	-	protein_coding	KNOWN	DOLK	1	1	0.784668
chr9	128947699	129007096	128977397	ENSG00000095319.14	+	protein_coding	KNOWN	NUP188	11	44	0.639613
chr9	129004502	129004998	129004750	ENSG00000267834.1	-	lincRNA	KNOWN	RP11-167N5.5	1	1	0.775207
chr9	129007036	129028303	129017669	ENSG00000148341.17	-	protein_coding	KNOWN	SH3GLB2	12	13	0.886942
chr9	129036621	129072082	129054351	ENSG00000148343.18	+	protein_coding	KNOWN	FAM73B	13	17	0.941902
chr9	129040566	129040674	129040620	ENSG00000280692.1	+	miRNA	NOVEL	AL592211.1	1	1	0.949034
chr9	129081100	129090438	129085769	ENSG00000167130.17	+	protein_coding	KNOWN	DOLPP1	5	8	0.633281
chr9	129094810	129111189	129102999	ENSG00000095321.16	-	protein_coding	KNOWN	CRAT	9	15	0.890346
chr9	129097854	129100266	129099060	ENSG00000234055.1	+	antisense	KNOWN	RP11-247A12.1	1	2	0.877253
chr9	129107050	129107151	129107100	ENSG00000221521.1	-	miRNA	NOVEL	AL158151.2	1	1	0.877253
chr9	129110950	129148946	129129948	ENSG00000119383.19	+	protein_coding	KNOWN	PPP2R4	26	11	1.010597
chr9	129170434	129170940	129170687	ENSG00000268707.1	+	lincRNA	KNOWN	RP11-247A12.7	1	1	0.968120
chr9	129175552	129178262	129176907	ENSG00000188483.7	-	protein_coding	KNOWN	IER5L	1	1	0.968120
chr9	129175807	129177575	129176691	ENSG00000268050.2	+	antisense	KNOWN	RP11-247A12.8	1	3	0.968120
chr9	129176771	129210548	129193659	ENSG00000204055.4	+	antisense	KNOWN	RP11-247A12.2	2	2	1.022945
chr9	129230572	129230717	129230644	ENSG00000220992.1	-	miRNA	NOVEL	AL158151.1	1	1	1.000651
chr9	129258354	129259846	129259100	ENSG00000235007.2	+	lincRNA	KNOWN	RP11-344B5.4	1	3	0.769073
chr9	129259062	129261581	129260321	ENSG00000241084.1	+	lincRNA	KNOWN	RP11-344B5.3	1	2	0.769073
chr9	129282458	129285728	129284093	ENSG00000224307.1	+	lincRNA	KNOWN	RP11-344B5.2	1	3	0.915527
chr9	129321016	129324905	129322960	ENSG00000179082.3	+	lincRNA	KNOWN	C9orf106	1	2	0.544784
chr9	129328261	129328401	129328331	ENSG00000268615.1	+	lincRNA	KNOWN	RP11-65J3.15	1	1	0.544784
chr9	129332300	129359538	129345919	ENSG00000233901.5	+	lincRNA	KNOWN	LINC01503	4	4	1.062713
chr9	129370170	129370461	129370315	ENSG00000242281.3	-	misc_RNA	KNOWN	RN7SL159P	1	1	0.692189
chr9	129380136	129380470	129380303	ENSG00000236146.2	-	processed_pseudogene	KNOWN	RP11-65J3.6	1	1	0.692189
chr9	129430652	129451422	129441037	ENSG00000230676.1	-	lincRNA	KNOWN	RP11-65J3.3	2	2	1.009085
chr9	129438216	129439118	129438667	ENSG00000226355.1	+	lincRNA	KNOWN	RP11-65J3.2	1	2	1.020909
chr9	129478556	129478652	129478604	ENSG00000264298.1	+	miRNA	NOVEL	AL353803.1	1	1	0.895595
chr9	129480605	129482538	129481571	ENSG00000261334.1	-	lincRNA	KNOWN	RP11-65J3.14	1	1	0.895595
chr9	129483451	129513683	129498567	ENSG00000204054.12	+	processed_transcript	KNOWN	LINC00963	19	5	1.174921
chr9	129501990	129513686	129507838	ENSG00000239353.1	+	lincRNA	KNOWN	RP11-492E3.51	1	2	1.148223
chr9	129575409	129584556	129579982	ENSG00000227619.1	+	antisense	KNOWN	RP11-492E3.2	1	4	1.388974
chr9	129608884	129636131	129622507	ENSG00000148335.14	+	protein_coding	KNOWN	NTMT1	11	5	0.976298
chr9	129612225	129620776	129616500	ENSG00000179058.6	-	protein_coding	KNOWN	C9orf50	2	7	0.936341
chr9	129634604	129642169	129638386	ENSG00000148331.11	-	protein_coding	KNOWN	ASB6	3	6	1.112340
chr9	129640476	129641282	129640879	ENSG00000234789.1	+	antisense	KNOWN	RP11-483H20.4	1	2	1.112340
chr9	129665641	129722674	129694157	ENSG00000167157.10	+	protein_coding	KNOWN	PRRX2	1	4	1.010215
chr9	129712896	129718635	129715765	ENSG00000236024.1	-	antisense	KNOWN	PRRX2-AS1	1	2	1.012213
chr9	129738331	129753047	129745689	ENSG00000148344.10	-	protein_coding	KNOWN	PTGES	2	4	1.121279
chr9	129791196	129791837	129791516	ENSG00000233909.1	+	processed_pseudogene	KNOWN	UBE2V1P4	1	2	0.674106
chr9	129803153	129811281	129807217	ENSG00000136816.15	+	protein_coding	KNOWN	TOR1B	4	5	0.687002
chr9	129812944	129824134	129818539	ENSG00000136827.11	-	protein_coding	KNOWN	TOR1A	4	5	0.755871
chr9	129827290	129835863	129831576	ENSG00000136819.14	-	protein_coding	KNOWN	C9orf78	8	10	0.621180
chr9	129834698	129881838	129858268	ENSG00000136878.12	+	protein_coding	KNOWN	USP20	9	26	0.883028
chr9	129869605	129869671	129869638	ENSG00000276124.1	+	miRNA	KNOWN	MIR6855	1	1	0.990352
chr9	129883693	129884170	129883931	ENSG00000224988.1	-	processed_pseudogene	KNOWN	RP11-409K20.7	1	2	1.120561
chr9	129887187	130043194	129965190	ENSG00000187239.16	-	protein_coding	KNOWN	FNBP1	9	17	0.519001
chr9	129933536	129936541	129935038	ENSG00000230684.1	+	antisense	KNOWN	RP11-409K20.6	1	2	0.473862
chr9	130044713	130045081	130044897	ENSG00000270755.1	+	lincRNA	KNOWN	RP11-138E2.1	1	1	0.490254
chr9	130053426	130140169	130096797	ENSG00000148358.19	+	protein_coding	KNOWN	GPR107	8	20	0.617837
chr9	130120806	130120912	130120859	ENSG00000223188.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.674139
chr9	130140610	130144219	130142414	ENSG00000196979.1	-	lincRNA	KNOWN	RP11-88G17.6	1	2	0.780048
chr9	130172578	130237304	130204941	ENSG00000107130.9	+	protein_coding	KNOWN	NCS1	3	8	0.860420
chr9	130265882	130434123	130350002	ENSG00000148357.16	+	protein_coding	KNOWN	HMCN2	6	98	0.722887
chr9	130400266	130400565	130400415	ENSG00000264169.2	+	misc_RNA	KNOWN	RN7SL665P	1	1	0.897981
chr9	130444929	130501274	130473101	ENSG00000130707.17	+	protein_coding	KNOWN	ASS1	10	16	0.918101
chr9	130578965	130638352	130608658	ENSG00000107164.15	+	protein_coding	KNOWN	FUBP3	6	19	0.390591
chr9	130626297	130626363	130626330	ENSG00000277713.1	+	miRNA	KNOWN	MIR6856	1	1	0.523424
chr9	130651799	130652383	130652091	ENSG00000232172.1	+	processed_pseudogene	KNOWN	RP11-57C19.2	1	1	0.642861
chr9	130664594	130682981	130673787	ENSG00000130711.3	+	protein_coding	KNOWN	PRDM12	1	5	0.761277
chr9	130693721	130704894	130699307	ENSG00000130713.15	+	protein_coding	KNOWN	EXOSC2	11	9	0.648385
chr9	130713946	130887675	130800810	ENSG00000097007.17	+	protein_coding	KNOWN	ABL1	3	11	0.495349
chr9	130724786	130725050	130724918	ENSG00000224797.1	-	processed_pseudogene	KNOWN	RP11-57C19.6	1	1	0.762102
chr9	130892702	130896812	130894757	ENSG00000188710.2	-	protein_coding	KNOWN	QRFP	2	3	0.951984
chr9	130902438	130939286	130920862	ENSG00000130720.12	-	protein_coding	KNOWN	FIBCD1	7	8	0.831621
chr9	130933851	130945520	130939685	ENSG00000236658.1	+	antisense	KNOWN	RP11-83J21.3	1	3	0.919007
chr9	131009082	131094473	131051777	ENSG00000050555.17	+	protein_coding	KNOWN	LAMC3	4	28	0.829748
chr9	131021168	131021306	131021237	ENSG00000252582.1	-	snoRNA	NOVEL	SNORA31	1	1	0.696972
chr9	131096476	131123152	131109814	ENSG00000126878.12	+	protein_coding	KNOWN	AIF1L	10	7	0.564031
chr9	131125561	131234670	131180115	ENSG00000126883.16	+	protein_coding	KNOWN	NUP214	27	36	0.426943
chr9	131126990	131127091	131127040	ENSG00000252622.1	+	snRNA	KNOWN	RNU6-881P	1	1	0.756288
chr9	131132852	131167505	131150178	ENSG00000236986.6	-	antisense	KNOWN	RP11-544A12.4	14	5	0.634481
chr9	131189910	131194205	131192057	ENSG00000246851.1	-	antisense	KNOWN	RP11-544A12.8	1	2	0.259629
chr9	131240687	131241724	131241205	ENSG00000226987.1	+	processed_pseudogene	KNOWN	RP11-544A12.5	1	2	0.663898
chr9	131258076	131276547	131267311	ENSG00000126882.12	-	protein_coding	KNOWN	FAM78A	4	4	0.663091
chr9	131289694	131309262	131299478	ENSG00000160539.4	+	protein_coding	KNOWN	PLPP7	2	2	0.734914
chr9	131394093	131500197	131447145	ENSG00000130723.17	+	protein_coding	KNOWN	PRRC2B	9	31	0.758364
chr9	131485665	131485750	131485707	ENSG00000235284.1	+	snoRNA	KNOWN	SNORD62A	1	1	0.748508
chr9	131490486	131490571	131490528	ENSG00000231587.1	+	snoRNA	KNOWN	SNORD62B	1	1	1.032049
chr9	131497479	131500191	131498835	ENSG00000176868.2	-	antisense	KNOWN	RP11-334J6.7	2	3	1.032049
chr9	131502902	131523806	131513354	ENSG00000130714.15	+	protein_coding	KNOWN	POMT1	16	20	0.937035
chr9	131516558	131522229	131519393	ENSG00000230289.1	-	antisense	KNOWN	RP11-334J6.6	1	2	0.888197
chr9	131523801	131531268	131527534	ENSG00000130717.12	-	protein_coding	KNOWN	UCK1	9	8	0.925287
chr9	131576770	131740074	131658422	ENSG00000107263.18	-	protein_coding	KNOWN	RAPGEF1	7	24	0.699787
chr9	131725168	131725467	131725317	ENSG00000240853.3	-	misc_RNA	KNOWN	RN7SL328P	1	1	0.569198
chr9	131782570	131782813	131782691	ENSG00000231018.1	-	processed_pseudogene	KNOWN	EIF4A1P3	1	1	0.595839
chr9	131782860	131782958	131782909	ENSG00000212395.1	-	snoRNA	NOVEL	SNORA67	1	1	0.595839
chr9	131816192	131820988	131818590	ENSG00000236687.1	+	lincRNA	KNOWN	RP11-323H21.3	1	3	0.540452
chr9	131860107	132079908	131970007	ENSG00000160563.13	-	protein_coding	KNOWN	MED27	4	8	0.336640
chr9	132161676	132244534	132203105	ENSG00000196358.10	+	protein_coding	KNOWN	NTNG2	4	8	0.717245
chr9	132214751	132214875	132214813	ENSG00000221105.1	-	miRNA	NOVEL	AL159997.1	1	1	0.868896
chr9	132261356	132354985	132308170	ENSG00000107290.13	-	protein_coding	KNOWN	SETX	5	26	0.286723
chr9	132375548	132406851	132391199	ENSG00000125482.12	-	protein_coding	KNOWN	TTF1	3	11	0.486046
chr9	132410043	132573317	132491680	ENSG00000188523.8	+	protein_coding	KNOWN	CFAP77	3	7	0.504377
chr9	132421641	132421690	132421665	ENSG00000252521.1	+	snRNA	KNOWN	RNU5D-2P	1	1	0.426109
chr9	132582185	132590266	132586225	ENSG00000125492.9	+	protein_coding	KNOWN	BARHL1	2	4	0.607866
chr9	132592997	132670401	132631699	ENSG00000125485.17	-	protein_coding	KNOWN	DDX31	7	20	0.397311
chr9	132623250	132623333	132623291	ENSG00000276629.1	-	miRNA	NOVEL	AL160165.1	1	1	0.421782
chr9	132670035	132694955	132682495	ENSG00000125484.11	+	protein_coding	KNOWN	GTF3C4	2	5	0.489394
chr9	132725578	132878777	132802177	ENSG00000165695.9	-	protein_coding	KNOWN	AK8	5	15	0.463713
chr9	132768965	132770212	132769588	ENSG00000224992.2	-	sense_intronic	KNOWN	RP11-295G24.5	1	2	0.492541
chr9	132878027	132890201	132884114	ENSG00000165698.15	+	protein_coding	KNOWN	C9orf9	3	5	0.727364
chr9	132891348	132944633	132917990	ENSG00000165699.13	-	protein_coding	KNOWN	TSC1	8	23	0.438424
chr9	132945533	132991687	132968610	ENSG00000165702.12	+	protein_coding	KNOWN	GFI1B	4	11	0.420889
chr9	132945707	132945771	132945739	ENSG00000263816.1	+	miRNA	KNOWN	MIR548AW	1	1	0.305860
chr9	132947069	132951560	132949314	ENSG00000233800.3	+	sense_intronic	KNOWN	RP11-295G24.4	2	2	0.312452
chr9	132962511	132962667	132962589	ENSG00000234907.1	+	processed_pseudogene	KNOWN	RP11-415H23.4	1	1	0.324826
chr9	132963732	132963793	132963762	ENSG00000238558.1	+	snRNA	KNOWN	RNU7-21P	1	1	0.324826
chr9	133019486	133020874	133020180	ENSG00000196205.8	+	processed_pseudogene	KNOWN	EEF1A1P5	1	1	0.733097
chr9	133030675	133058503	133044589	ENSG00000148308.17	+	protein_coding	KNOWN	GTF3C5	10	12	0.612798
chr9	133051996	133052059	133052027	ENSG00000273932.1	+	miRNA	KNOWN	MIR6877	1	1	0.875734
chr9	133061978	133087355	133074666	ENSG00000170835.13	+	protein_coding	KNOWN	CEL	2	11	0.903560
chr9	133079900	133087355	133083627	ENSG00000170827.9	+	transcribed_unprocessed_pseudogene	KNOWN	CELP	3	5	0.916420
chr9	133097720	133149334	133123527	ENSG00000160271.14	-	protein_coding	KNOWN	RALGDS	15	18	1.091586
chr9	133152948	133163945	133158446	ENSG00000148288.11	-	protein_coding	KNOWN	GBGT1	8	7	1.197883
chr9	133205277	133209250	133207263	ENSG00000171102.14	-	protein_coding	KNOWN	OBP2B	5	8	0.374230
chr9	133224905	133228591	133226748	ENSG00000119440.8	-	unprocessed_pseudogene	KNOWN	LCN1P1	1	6	0.985077
chr9	133250401	133275214	133262807	ENSG00000175164.13	-	protein_coding	KNOWN	ABO	3	9	0.540226
chr9	133302470	133302563	133302516	ENSG00000201843.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.348848
chr9	133317794	133318469	133318131	ENSG00000204031.3	+	unprocessed_pseudogene	KNOWN	LCN1P2	1	2	0.586756
chr9	133328774	133336398	133332586	ENSG00000148296.6	-	protein_coding	KNOWN	SURF6	2	5	0.774174
chr9	133337728	133337824	133337776	ENSG00000201451.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.810053
chr9	133338323	133348131	133343227	ENSG00000148297.15	-	protein_coding	KNOWN	MED22	10	5	0.810053
chr9	133338990	133339465	133339227	ENSG00000230064.1	+	processed_pseudogene	KNOWN	RP11-244N20.7	1	1	0.810053
chr9	133348214	133351426	133349820	ENSG00000148303.16	+	protein_coding	KNOWN	RPL7A	9	8	0.957414
chr9	133349396	133349470	133349433	ENSG00000206611.1	+	snoRNA	KNOWN	SNORD24	1	1	0.810053
chr9	133350095	133350168	133350131	ENSG00000200831.1	+	snoRNA	KNOWN	SNORD36B	1	1	1.141745
chr9	133350456	133350528	133350492	ENSG00000199744.1	+	snoRNA	KNOWN	SNORD36A	1	1	1.141745
chr9	133350847	133350912	133350879	ENSG00000252542.1	+	snoRNA	KNOWN	SNORD36C	1	1	1.141745
chr9	133351755	133356676	133354215	ENSG00000148290.9	-	protein_coding	KNOWN	SURF1	5	9	1.141745
chr9	133353713	133353831	133353772	ENSG00000281114.1	-	miRNA	NOVEL	AL593848.2	1	1	1.141745
chr9	133356552	133361169	133358860	ENSG00000148291.9	+	protein_coding	KNOWN	SURF2	3	6	1.141745
chr9	133361449	133376166	133368807	ENSG00000148248.13	-	protein_coding	KNOWN	SURF4	9	7	1.160033
chr9	133376367	133406096	133391231	ENSG00000198870.7	+	protein_coding	KNOWN	STKLD1	5	18	1.062212
chr9	133406059	133418096	133412077	ENSG00000148300.11	-	protein_coding	KNOWN	REXO4	6	8	0.826583
chr9	133414358	133459402	133436880	ENSG00000160323.18	+	protein_coding	KNOWN	ADAMTS13	9	29	0.797679
chr9	133459965	133470848	133465406	ENSG00000160325.14	+	protein_coding	KNOWN	CACFD1	7	6	1.095780
chr9	133471095	133479137	133475116	ENSG00000160326.13	-	protein_coding	KNOWN	SLC2A6	5	10	1.284040
chr9	133514586	133528612	133521599	ENSG00000187616.4	-	protein_coding	KNOWN	TMEM8C	2	5	0.883806
chr9	133532164	133575519	133553841	ENSG00000197859.9	+	protein_coding	KNOWN	ADAMTSL2	3	19	1.001228
chr9	133578415	133586197	133582306	ENSG00000196990.8	-	protein_coding	KNOWN	FAM163B	2	3	1.087175
chr9	133611798	133633099	133622448	ENSG00000261018.1	-	antisense	KNOWN	LL09NC01-254D11.1	1	2	0.659711
chr9	133636360	133659344	133647852	ENSG00000123454.10	+	protein_coding	KNOWN	DBH	2	12	0.705746
chr9	133654586	133657313	133655949	ENSG00000225756.1	-	antisense	KNOWN	DBH-AS1	1	2	0.758484
chr9	133663560	133739955	133701757	ENSG00000123453.16	-	protein_coding	KNOWN	SARDH	9	21	0.817025
chr9	133761894	133992604	133877249	ENSG00000160293.16	-	protein_coding	KNOWN	VAV2	5	30	0.941411
chr9	134025439	134034666	134030052	ENSG00000235106.8	+	antisense	KNOWN	LINC00094	8	4	0.865133
chr9	134030305	134068535	134049420	ENSG00000169925.16	-	protein_coding	KNOWN	BRD3	6	12	0.922363
chr9	134054290	134058805	134056547	ENSG00000235138.1	+	antisense	KNOWN	RP11-374P20.4	1	3	0.896001
chr9	134078904	134079444	134079174	ENSG00000271525.1	+	processed_pseudogene	KNOWN	ARF4P1	1	1	0.725864
chr9	134132242	134135772	134134007	ENSG00000273249.1	-	antisense	KNOWN	LL09NC01-251B2.3	2	2	0.797706
chr9	134135365	134159968	134147666	ENSG00000196363.9	+	protein_coding	KNOWN	WDR5	3	14	0.781720
chr9	134164439	134164564	134164501	ENSG00000221676.1	-	snRNA	KNOWN	RNU6ATAC	1	1	0.758254
chr9	134168769	134169340	134169054	ENSG00000273473.1	+	lincRNA	KNOWN	LL09NC01-139C3.1	1	1	0.758254
chr9	134293931	134295397	134294664	ENSG00000223729.1	-	lincRNA	KNOWN	RP11-145E17.2	1	2	0.990112
chr9	134298463	134300413	134299438	ENSG00000279929.1	+	TEC	KNOWN	RP11-145E17.3	1	1	0.990112
chr9	134317098	134440585	134378841	ENSG00000186350.9	+	protein_coding	KNOWN	RXRA	3	12	1.119450
chr9	134379411	134379472	134379441	ENSG00000263897.1	+	miRNA	KNOWN	MIR4669	1	1	1.100762
chr9	134505472	134521442	134513457	ENSG00000223795.2	+	lincRNA	KNOWN	RP11-473E2.2	1	3	0.840364
chr9	134527182	134545244	134536213	ENSG00000228877.2	+	lincRNA	KNOWN	RP11-473E2.4	1	2	0.794836
chr9	134552738	134553897	134553317	ENSG00000227150.1	+	lincRNA	KNOWN	RP11-473E2.3	1	2	0.897220
chr9	134641774	134844843	134743308	ENSG00000130635.15	+	protein_coding	KNOWN	COL5A1	8	66	1.223467
chr9	134649385	134652843	134651114	ENSG00000204011.4	-	antisense	KNOWN	COL5A1-AS1	1	2	1.353316
chr9	134848973	134849120	134849046	ENSG00000264877.1	-	miRNA	NOVEL	AL603650.2	1	1	1.513693
chr9	134849175	134849252	134849213	ENSG00000265286.1	-	miRNA	NOVEL	AL603650.3	1	1	1.513693
chr9	134849298	134849369	134849333	ENSG00000264744.1	-	miRNA	KNOWN	MIR3689C	1	1	1.513693
chr9	134849487	134849564	134849525	ENSG00000265872.1	-	miRNA	KNOWN	MIR3689A	1	1	1.513693
chr9	134849609	134849682	134849645	ENSG00000265848.1	-	miRNA	KNOWN	MIR3689D1	1	1	1.513693
chr9	134849813	134849960	134849886	ENSG00000266060.1	-	miRNA	NOVEL	AL603650.4	1	1	1.513693
chr9	134849991	134850068	134850029	ENSG00000263507.1	-	miRNA	NOVEL	AL603650.1	1	1	1.245741
chr9	134850125	134850272	134850198	ENSG00000264163.1	-	miRNA	KNOWN	MIR3689B	1	1	1.214674
chr9	134850277	134850356	134850316	ENSG00000264136.1	-	miRNA	KNOWN	MIR3689D2	1	1	1.214674
chr9	134850570	134850641	134850605	ENSG00000266827.1	-	miRNA	KNOWN	MIR3689E	1	1	1.214674
chr9	134850615	134850692	134850653	ENSG00000281636.1	-	miRNA	NOVEL	AL603650.5	1	1	1.214674
chr9	134850742	134850807	134850774	ENSG00000266514.1	-	miRNA	KNOWN	MIR3689F	1	1	1.214674
chr9	134868236	134868475	134868355	ENSG00000232355.2	+	unprocessed_pseudogene	KNOWN	RP11-263F14.3	1	1	1.214674
chr9	134880812	134887520	134884166	ENSG00000160339.15	+	protein_coding	KNOWN	FCN2	2	8	0.825656
chr9	134905890	134917963	134911926	ENSG00000085265.10	-	protein_coding	KNOWN	FCN1	2	9	0.753534
chr9	134937151	134943195	134940173	ENSG00000236403.1	+	lincRNA	KNOWN	RP11-447M12.2	1	3	0.716675
chr9	134992958	134995854	134994406	ENSG00000279935.1	+	TEC	KNOWN	RP11-447M12.3	1	1	0.709016
chr9	135075243	135121179	135098211	ENSG00000130558.18	+	protein_coding	KNOWN	OLFM1	13	6	0.523026
chr9	135204722	135237597	135221159	ENSG00000227958.1	-	lincRNA	KNOWN	RP11-399H11.3	1	2	0.612099
chr9	135245696	135252708	135249202	ENSG00000233936.1	-	lincRNA	KNOWN	RP11-399H11.2	1	2	0.464958
chr9	135343249	135346562	135344905	ENSG00000178243.4	+	lincRNA	KNOWN	C9orf62	1	3	0.546304
chr9	135352684	135354220	135353452	ENSG00000235572.1	+	lincRNA	KNOWN	RP11-555H7.2	1	3	0.534935
chr9	135447446	135450154	135448800	ENSG00000224682.1	+	processed_pseudogene	KNOWN	SOCS5P2	1	5	0.553134
chr9	135462727	135480777	135471752	ENSG00000225361.3	-	antisense	KNOWN	PPP1R26-AS1	4	3	0.763569
chr9	135479079	135488893	135483986	ENSG00000196422.10	+	protein_coding	KNOWN	PPP1R26	6	4	0.929610
chr9	135495181	135501734	135498457	ENSG00000160345.12	-	protein_coding	KNOWN	C9orf116	5	4	0.796536
chr9	135499984	135504673	135502328	ENSG00000122140.10	+	protein_coding	KNOWN	MRPS2	8	5	0.796536
chr9	135503273	135506447	135504860	ENSG00000226706.1	-	antisense	KNOWN	RP11-426A6.5	1	3	0.796536
chr9	135521438	135526532	135523985	ENSG00000160349.9	+	protein_coding	KNOWN	LCN1	2	7	0.888947
chr9	135528611	135528700	135528655	ENSG00000221613.1	-	miRNA	NOVEL	AL161452.1	1	1	0.888947
chr9	135546139	135549969	135548054	ENSG00000122136.13	+	protein_coding	KNOWN	OBP2A	7	7	0.760651
chr9	135561756	135566955	135564355	ENSG00000122133.16	+	protein_coding	KNOWN	PAEP	9	7	0.607320
chr9	135574935	135587112	135581023	ENSG00000237339.5	+	lincRNA	KNOWN	LINC01502	3	6	0.478573
chr9	135588002	135591975	135589988	ENSG00000224045.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-98L5.4	2	5	0.588813
chr9	135614296	135615508	135614902	ENSG00000236543.1	+	antisense	KNOWN	RP11-98L5.5	1	2	0.859546
chr9	135623656	135639540	135631598	ENSG00000204007.6	-	protein_coding	KNOWN	GLT6D1	2	6	0.520248
chr9	135663322	135666422	135664872	ENSG00000148386.9	+	protein_coding	KNOWN	LCN9	4	7	0.220634
chr9	135693407	135699528	135696467	ENSG00000165643.10	-	protein_coding	KNOWN	SOHLH1	2	8	0.810221
chr9	135702185	135795508	135748846	ENSG00000107147.11	+	protein_coding	KNOWN	KCNT1	15	32	0.875219
chr9	135808487	135907228	135857857	ENSG00000130559.18	-	protein_coding	KNOWN	CAMSAP1	10	18	0.655570
chr9	135907812	135913513	135910662	ENSG00000238058.1	+	antisense	KNOWN	RP11-432J22.2	1	3	0.832396
chr9	135932969	135961380	135947174	ENSG00000130560.8	-	protein_coding	KNOWN	UBAC1	6	10	0.860645
chr9	136006537	136095285	136050911	ENSG00000148411.7	-	protein_coding	KNOWN	NACC2	3	6	1.051756
chr9	136107808	136109424	136108616	ENSG00000260193.1	-	lincRNA	KNOWN	RP11-83N9.5	2	2	1.259719
chr9	136114581	136118863	136116722	ENSG00000238227.7	-	protein_coding	KNOWN	C9orf69	5	3	1.310084
chr9	136122521	136124363	136123442	ENSG00000275329.1	+	lincRNA	KNOWN	RP11-83N9.6	1	1	1.310084
chr9	136196250	136205109	136200679	ENSG00000107187.15	-	protein_coding	KNOWN	LHX3	3	6	0.759755
chr9	136206333	136245841	136226087	ENSG00000165661.15	-	protein_coding	KNOWN	QSOX2	3	14	1.174877
chr9	136249971	136251205	136250588	ENSG00000264527.2	-	lincRNA	KNOWN	WI2-1959D15.1	1	1	1.264228
chr9	136249978	136251205	136250591	ENSG00000279813.1	+	protein_coding	KNOWN	CR392000.1	1	1	1.264962
chr9	136280942	136306901	136293921	ENSG00000260220.5	-	protein_coding	KNOWN	CCDC187	4	10	1.042495
chr9	136322303	136327323	136324813	ENSG00000262075.3	-	lincRNA	KNOWN	DKFZP434A062	2	1	1.088087
chr9	136327476	136359605	136343540	ENSG00000160360.11	+	protein_coding	KNOWN	GPSM1	6	14	1.457782
chr9	136359480	136363789	136361634	ENSG00000213221.4	-	protein_coding	KNOWN	DNLZ	2	3	1.478270
chr9	136361903	136373681	136367792	ENSG00000187796.13	-	protein_coding	KNOWN	CARD9	7	13	1.423208
chr9	136375577	136398797	136387187	ENSG00000165684.3	-	protein_coding	KNOWN	SNAPC4	1	23	1.352003
chr9	136401922	136410609	136406265	ENSG00000165689.16	-	protein_coding	KNOWN	SDCCAG3	11	10	1.427192
chr9	136410570	136423761	136417165	ENSG00000165688.11	+	protein_coding	KNOWN	PMPCA	12	13	1.340429
chr9	136428619	136439822	136434220	ENSG00000148384.11	-	protein_coding	KNOWN	INPP5E	1	10	1.476960
chr9	136440096	136483759	136461927	ENSG00000148396.18	-	protein_coding	KNOWN	SEC16A	9	30	1.294464
chr9	136483495	136486067	136484781	ENSG00000196366.3	+	lincRNA	KNOWN	C9orf163	2	1	1.129039
chr9	136494444	136545862	136520153	ENSG00000148400.9	-	protein_coding	KNOWN	NOTCH1	3	34	1.307908
chr9	136519568	136519626	136519597	ENSG00000263403.1	-	miRNA	KNOWN	MIR4673	1	1	1.539075
chr9	136542881	136543835	136543358	ENSG00000227512.1	+	antisense	KNOWN	RP11-413M3.4	1	2	1.156532
chr9	136546173	136546259	136546216	ENSG00000265181.1	-	miRNA	KNOWN	MIR4674	1	1	1.156532
chr9	136546212	136549893	136548052	ENSG00000237886.1	+	antisense	KNOWN	NALT1	2	3	1.156532
chr9	136612024	136617181	136614602	ENSG00000279141.3	-	lincRNA	KNOWN	LINC01451	3	4	1.269910
chr9	136648610	136660421	136654515	ENSG00000228401.4	-	antisense	KNOWN	RP11-251M1.1	1	2	1.258579
chr9	136658856	136672678	136665767	ENSG00000172889.15	+	protein_coding	KNOWN	EGFL7	7	11	1.268563
chr9	136670602	136670686	136670644	ENSG00000199161.1	+	miRNA	KNOWN	MIR126	1	1	1.343711
chr9	136673143	136687423	136680283	ENSG00000169692.12	-	protein_coding	KNOWN	AGPAT2	5	7	1.343711
chr9	136694136	136694262	136694199	ENSG00000221693.1	+	miRNA	NOVEL	AL590226.1	1	1	1.237932
chr9	136712570	136724050	136718310	ENSG00000165716.9	+	protein_coding	KNOWN	FAM69B	3	5	1.110139
chr9	136721366	136728184	136724775	ENSG00000233016.6	-	antisense	KNOWN	SNHG7	4	6	1.110139
chr9	136726104	136726239	136726171	ENSG00000280496.1	-	snoRNA	KNOWN	SNORA43	1	1	1.110139
chr9	136726105	136726234	136726169	ENSG00000276161.1	-	snoRNA	KNOWN	SNORA43	1	1	1.110139
chr9	136726747	136726879	136726813	ENSG00000274998.1	-	snoRNA	KNOWN	SNORA17	1	1	1.110139
chr9	136726748	136726879	136726813	ENSG00000281808.1	-	snoRNA	NOVEL	SNORA17	1	1	1.110139
chr9	136728953	136729855	136729404	ENSG00000274356.1	-	unprocessed_pseudogene	KNOWN	RP11-216L13.21	1	3	1.110139
chr9	136738167	136743356	136740761	ENSG00000187922.13	-	protein_coding	KNOWN	LCN10	8	6	1.156122
chr9	136738167	136748453	136743310	ENSG00000204003.8	-	protein_coding	KNOWN	RP11-216L13.16	2	11	1.156122
chr9	136744011	136748528	136746269	ENSG00000267206.5	-	protein_coding	KNOWN	LCN6	6	7	1.156122
chr9	136746893	136746970	136746931	ENSG00000278756.1	-	miRNA	KNOWN	MIR6722	1	1	1.156122
chr9	136754386	136758543	136756464	ENSG00000204001.9	-	protein_coding	KNOWN	LCN8	5	7	1.143451
chr9	136759634	136766255	136762944	ENSG00000177984.6	-	protein_coding	KNOWN	LCN15	3	7	1.143451
chr9	136779939	136780218	136780078	ENSG00000224662.2	+	processed_pseudogene	KNOWN	ATP6V1G1P3	1	1	1.373223
chr9	136791355	136793257	136792306	ENSG00000244187.7	+	protein_coding	KNOWN	TMEM141	6	5	1.054321
chr9	136791379	136800595	136795987	ENSG00000272896.1	+	protein_coding	KNOWN	RP11-216L13.17	1	6	1.054321
chr9	136796350	136807741	136802045	ENSG00000213213.13	+	protein_coding	KNOWN	CCDC183	8	14	1.054321
chr9	136799223	136810042	136804632	ENSG00000273066.5	+	processed_transcript	KNOWN	RP11-216L13.19	2	10	1.055048
chr9	136800366	136829466	136814916	ENSG00000272679.1	+	processed_transcript	KNOWN	RP11-216L13.18	1	6	1.176655
chr9	136803927	136808848	136806387	ENSG00000228544.1	-	antisense	KNOWN	CCDC183-AS1	1	5	1.054321
chr9	136807943	136957733	136882838	ENSG00000196642.16	+	protein_coding	KNOWN	RABL6	12	15	1.208224
chr9	136808197	136840522	136824359	ENSG00000282955.1	+	protein_coding	KNOWN	RABL6	1	15	1.186206
chr9	136812788	136815536	136814162	ENSG00000213212.3	-	processed_pseudogene	KNOWN	NCLP1	1	4	1.237190
chr9	136830957	136831023	136830990	ENSG00000265806.1	+	miRNA	KNOWN	MIR4292	1	1	1.111891
chr9	136844415	136848801	136846608	ENSG00000232434.2	+	protein_coding	KNOWN	C9orf172	1	1	1.111891
chr9	136848724	136851027	136849875	ENSG00000054148.17	+	protein_coding	KNOWN	PHPT1	6	5	1.378960
chr9	136850943	136860799	136855871	ENSG00000177943.13	+	protein_coding	KNOWN	MAMDC4	5	29	1.710198
chr9	136862119	136866286	136864202	ENSG00000107223.12	-	protein_coding	KNOWN	EDF1	3	5	1.710198
chr9	136881912	136926607	136904259	ENSG00000127191.17	+	protein_coding	KNOWN	TRAF2	8	11	1.074487
chr9	136886733	136886803	136886768	ENSG00000266507.1	+	miRNA	KNOWN	MIR4479	1	1	0.977614
chr9	136935840	136937161	136936500	ENSG00000213590.2	+	processed_pseudogene	KNOWN	RP11-229P13.2	1	1	1.120561
chr9	136937169	136937988	136937578	ENSG00000260190.1	-	sense_overlapping	KNOWN	RP11-229P13.25	1	1	1.120561
chr9	136940435	136944696	136942565	ENSG00000159069.13	-	protein_coding	KNOWN	FBXW5	8	9	1.120561
chr9	136945246	136946974	136946110	ENSG00000176919.11	+	protein_coding	KNOWN	C8G	4	7	1.120561
chr9	136949551	136955497	136952524	ENSG00000184925.11	+	protein_coding	KNOWN	LCN12	15	7	1.546067
chr9	136969243	136971990	136970616	ENSG00000198454.2	+	lincRNA	KNOWN	PRR31	1	4	1.456880
chr9	136975094	136976981	136976037	ENSG00000238268.2	+	lincRNA	KNOWN	RP11-229P13.19	1	3	1.409850
chr9	136977505	136985435	136981470	ENSG00000107317.11	+	protein_coding	KNOWN	PTGDS	9	10	1.409850
chr9	136981904	136986410	136984157	ENSG00000214402.6	+	protein_coding	KNOWN	LCNL1	4	3	1.409850
chr9	136992418	136993984	136993201	ENSG00000148362.10	+	protein_coding	KNOWN	C9orf142	8	7	1.274342
chr9	136994635	136996803	136995719	ENSG00000169583.12	-	protein_coding	KNOWN	CLIC3	3	6	1.274342
chr9	137007227	137028922	137018074	ENSG00000107331.16	-	protein_coding	KNOWN	ABCA2	24	49	1.462580
chr9	137027464	137037957	137032710	ENSG00000180539.7	+	antisense	KNOWN	C9orf139	2	3	1.319265
chr9	137030174	137033010	137031592	ENSG00000180549.7	-	protein_coding	KNOWN	FUT7	1	2	1.264828
chr9	137031241	137040436	137035838	ENSG00000279073.3	-	protein_coding	KNOWN	RP11-229P13.27	2	5	1.264828
chr9	137039470	137046203	137042836	ENSG00000107281.9	-	protein_coding	KNOWN	NPDC1	6	9	1.264828
chr9	137048098	137054045	137051071	ENSG00000054179.11	-	protein_coding	KNOWN	ENTPD2	4	9	1.457396
chr9	137052662	137053375	137053018	ENSG00000236394.2	+	antisense	KNOWN	RP11-229P13.15	1	2	1.547874
chr9	137057663	137062461	137060062	ENSG00000229257.2	+	antisense	KNOWN	RP11-229P13.22	1	2	1.547874
chr9	137062124	137070588	137066356	ENSG00000186193.8	-	protein_coding	KNOWN	SAPCD2	1	6	1.520099
chr9	137063535	137064581	137064058	ENSG00000231864.2	+	antisense	KNOWN	RP11-229P13.23	1	2	1.547874
chr9	137077501	137084539	137081020	ENSG00000197355.10	+	protein_coding	KNOWN	UAP1L1	4	9	1.148747
chr9	137084946	137086817	137085881	ENSG00000268996.3	-	antisense	KNOWN	MAN1B1-AS1	1	1	1.148747
chr9	137086927	137109187	137098057	ENSG00000177239.14	+	protein_coding	KNOWN	MAN1B1	16	13	1.558832
chr9	137094345	137094430	137094387	ENSG00000199411.1	+	snoRNA	NOVEL	SNORD62	1	1	1.624487
chr9	137110542	137115177	137112859	ENSG00000176978.13	-	protein_coding	KNOWN	DPP7	13	13	1.170847
chr9	137138390	137168762	137153576	ENSG00000176884.14	+	protein_coding	KNOWN	GRIN1	13	21	1.363610
chr9	137168758	137170051	137169404	ENSG00000184709.7	-	protein_coding	KNOWN	LRRC26	1	2	1.459645
chr9	137168854	137171984	137170419	ENSG00000261793.1	-	protein_coding	KNOWN	RP11-350O14.18	1	3	1.299281
chr9	137169186	137169270	137169228	ENSG00000263697.1	-	miRNA	KNOWN	MIR3621	1	1	1.470503
chr9	137170858	137172409	137171633	ENSG00000185863.7	-	protein_coding	KNOWN	TMEM210	4	4	1.200516
chr9	137174784	137188549	137181666	ENSG00000176248.8	-	protein_coding	KNOWN	ANAPC2	8	13	1.200516
chr9	137188647	137190370	137189508	ENSG00000176101.11	+	protein_coding	KNOWN	SSNA1	4	3	1.228245
chr9	137191617	137204193	137197905	ENSG00000176058.11	-	protein_coding	KNOWN	TPRN	4	4	1.329296
chr9	137204082	137205638	137204860	ENSG00000187713.6	-	protein_coding	KNOWN	TMEM203	1	1	1.329296
chr9	137205670	137217009	137211339	ENSG00000188566.11	+	protein_coding	KNOWN	NDOR1	6	14	1.413002
chr9	137220247	137221581	137220914	ENSG00000212864.3	-	protein_coding	KNOWN	RNF208	2	2	1.464694
chr9	137224635	137226311	137225473	ENSG00000197191.4	+	protein_coding	KNOWN	CYSRT1	1	2	1.464694
chr9	137227271	137229638	137228454	ENSG00000233198.3	+	protein_coding	KNOWN	RNF224	1	3	1.464694
chr9	137230757	137236554	137233655	ENSG00000198569.9	+	protein_coding	KNOWN	SLC34A3	2	13	1.522626
chr9	137241213	137243707	137242460	ENSG00000188229.5	+	protein_coding	KNOWN	TUBB4B	2	4	1.522626
chr9	137243584	137247770	137245677	ENSG00000188163.7	-	protein_coding	KNOWN	FAM166A	3	7	1.522626
chr9	137250219	137253497	137251858	ENSG00000275549.1	-	antisense	KNOWN	C9orf173-AS1	1	4	1.381498
chr9	137251261	137253483	137252372	ENSG00000197768.10	+	protein_coding	KNOWN	C9orf173	7	6	1.381498
chr9	137255173	137273547	137264360	ENSG00000188986.5	+	protein_coding	KNOWN	NELFB	2	13	1.381852
chr9	137277749	137282641	137280195	ENSG00000198113.2	+	protein_coding	KNOWN	TOR4A	1	2	1.383332
chr9	137286112	137287236	137286674	ENSG00000270259.2	+	processed_pseudogene	KNOWN	RP13-122B23.9	1	2	1.383332
chr9	137293868	137295721	137294794	ENSG00000260996.1	-	sense_overlapping	KNOWN	RP13-122B23.8	1	1	1.020439
chr9	137300482	137302251	137301366	ENSG00000198435.3	-	protein_coding	KNOWN	NRARP	1	1	1.020439
chr9	137306896	137423262	137365079	ENSG00000187609.15	-	protein_coding	KNOWN	EXD3	12	22	1.060820
chr9	137423350	137434406	137428878	ENSG00000188747.8	+	protein_coding	KNOWN	NOXA1	2	14	1.278354
chr9	137434364	137441816	137438090	ENSG00000188833.9	-	protein_coding	KNOWN	ENTPD8	5	10	1.219104
chr9	137447570	137459334	137453452	ENSG00000165802.19	-	protein_coding	KNOWN	NSMF	11	16	1.392446
chr9	137450026	137450086	137450056	ENSG00000276682.1	-	miRNA	KNOWN	MIR7114	1	1	1.437550
chr9	137459953	137550534	137505243	ENSG00000130653.15	-	protein_coding	KNOWN	PNPLA7	7	35	1.022105
chr9	137545748	137545833	137545790	ENSG00000263933.1	+	miRNA	NOVEL	AL365502.1	1	1	0.737189
chr9	137551199	137552555	137551877	ENSG00000182154.7	+	protein_coding	KNOWN	MRPL41	1	2	0.756288
chr9	137554904	137578935	137566919	ENSG00000148399.11	-	protein_coding	KNOWN	DPH7	15	9	0.809485
chr9	137582079	137590490	137586284	ENSG00000165724.5	-	protein_coding	KNOWN	ZMYND19	2	6	0.910322
chr9	137605654	137615360	137610507	ENSG00000197070.13	+	protein_coding	KNOWN	ARRDC1	12	8	1.187729
chr9	137615332	137618906	137617119	ENSG00000203993.4	-	antisense	KNOWN	ARRDC1-AS1	3	3	1.269077
chr9	137618963	137870016	137744489	ENSG00000181090.17	+	protein_coding	KNOWN	EHMT1	23	27	0.584004
chr9	137638128	137638408	137638268	ENSG00000274841.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.417392
chr9	137640986	137641547	137641266	ENSG00000233998.1	-	processed_pseudogene	KNOWN	SETP5	1	1	0.417392
chr9	137763022	137764770	137763896	ENSG00000281796.1	+	sense_intronic	KNOWN	EHMT1-IT1	1	1	0.632042
chr9	137776539	137789235	137782887	ENSG00000255585.3	-	transcribed_processed_pseudogene	KNOWN	RP11-188C12.2	3	3	0.555741
chr9	137838419	137838516	137838467	ENSG00000207693.1	+	miRNA	KNOWN	MIR602	1	1	0.637592
chr9	137867925	137892570	137880247	ENSG00000203987.2	-	antisense	KNOWN	RP11-188C12.3	2	4	0.425268
chr9	137877789	138124624	138001206	ENSG00000148408.12	+	protein_coding	KNOWN	CACNA1B	7	47	0.218910
chr9	138129399	138129526	138129462	ENSG00000276388.1	+	unprocessed_pseudogene	KNOWN	RP11-424E7.5	1	1	0.163075
chr9	138137095	138143864	138140479	ENSG00000229926.1	+	unprocessed_pseudogene	KNOWN	RP11-424E7.3	1	8	0.426976
chr9	138150075	138177433	138163754	ENSG00000159247.13	+	transcribed_unprocessed_pseudogene	KNOWN	TUBBP5	4	5	0.058217
chr9	138177426	138179774	138178600	ENSG00000278130.1	-	unprocessed_pseudogene	KNOWN	RP11-424E7.6	1	6	-0.169593
chr9	138199933	138203325	138201629	ENSG00000237419.1	-	lincRNA	KNOWN	RP11-885N19.6	1	2	-0.259994
chr9	138216187	138252994	138234590	ENSG00000233013.8	+	lincRNA	KNOWN	FAM157B	2	9	0.172613
chr9	138259595	138259698	138259646	ENSG00000223256.1	+	snRNA	KNOWN	RNU6-785P	1	1	0.514683
chr9	138286248	138286430	138286339	ENSG00000250210.5	+	unprocessed_pseudogene	KNOWN	SEPT14P9	1	1	0.487533
chrM	577	647	612	ENSG00000210049.1	+	Mt_tRNA	KNOWN	MT-TF	1	1	NA
chrM	648	1601	1124	ENSG00000211459.2	+	Mt_rRNA	KNOWN	MT-RNR1	1	1	NA
chrM	1602	1670	1636	ENSG00000210077.1	+	Mt_tRNA	KNOWN	MT-TV	1	1	NA
chrM	1671	3229	2450	ENSG00000210082.2	+	Mt_rRNA	KNOWN	MT-RNR2	1	1	NA
chrM	3230	3304	3267	ENSG00000209082.1	+	Mt_tRNA	KNOWN	MT-TL1	1	1	NA
chrM	3307	4262	3784	ENSG00000198888.2	+	protein_coding	KNOWN	MT-ND1	1	1	NA
chrM	4263	4331	4297	ENSG00000210100.1	+	Mt_tRNA	KNOWN	MT-TI	1	1	NA
chrM	4329	4400	4364	ENSG00000210107.1	-	Mt_tRNA	KNOWN	MT-TQ	1	1	NA
chrM	4402	4469	4435	ENSG00000210112.1	+	Mt_tRNA	KNOWN	MT-TM	1	1	NA
chrM	4470	5511	4990	ENSG00000198763.3	+	protein_coding	KNOWN	MT-ND2	1	1	NA
chrM	5512	5579	5545	ENSG00000210117.1	+	Mt_tRNA	KNOWN	MT-TW	1	1	NA
chrM	5587	5655	5621	ENSG00000210127.1	-	Mt_tRNA	KNOWN	MT-TA	1	1	NA
chrM	5657	5729	5693	ENSG00000210135.1	-	Mt_tRNA	KNOWN	MT-TN	1	1	NA
chrM	5761	5826	5793	ENSG00000210140.1	-	Mt_tRNA	KNOWN	MT-TC	1	1	NA
chrM	5826	5891	5858	ENSG00000210144.1	-	Mt_tRNA	KNOWN	MT-TY	1	1	NA
chrM	5904	7445	6674	ENSG00000198804.2	+	protein_coding	KNOWN	MT-CO1	1	1	NA
chrM	7446	7514	7480	ENSG00000210151.2	-	Mt_tRNA	KNOWN	MT-TS1	1	1	NA
chrM	7518	7585	7551	ENSG00000210154.1	+	Mt_tRNA	KNOWN	MT-TD	1	1	NA
chrM	7586	8269	7927	ENSG00000198712.1	+	protein_coding	KNOWN	MT-CO2	1	1	NA
chrM	8295	8364	8329	ENSG00000210156.1	+	Mt_tRNA	KNOWN	MT-TK	1	1	NA
chrM	8366	8572	8469	ENSG00000228253.1	+	protein_coding	KNOWN	MT-ATP8	1	1	NA
chrM	8527	9207	8867	ENSG00000198899.2	+	protein_coding	KNOWN	MT-ATP6	1	1	NA
chrM	9207	9990	9598	ENSG00000198938.2	+	protein_coding	KNOWN	MT-CO3	1	1	NA
chrM	9991	10058	10024	ENSG00000210164.1	+	Mt_tRNA	KNOWN	MT-TG	1	1	NA
chrM	10059	10404	10231	ENSG00000198840.2	+	protein_coding	KNOWN	MT-ND3	1	1	NA
chrM	10405	10469	10437	ENSG00000210174.1	+	Mt_tRNA	KNOWN	MT-TR	1	1	NA
chrM	10470	10766	10618	ENSG00000212907.2	+	protein_coding	KNOWN	MT-ND4L	1	1	NA
chrM	10760	12137	11448	ENSG00000198886.2	+	protein_coding	KNOWN	MT-ND4	1	1	NA
chrM	12138	12206	12172	ENSG00000210176.1	+	Mt_tRNA	KNOWN	MT-TH	1	1	NA
chrM	12207	12265	12236	ENSG00000210184.1	+	Mt_tRNA	KNOWN	MT-TS2	1	1	NA
chrM	12266	12336	12301	ENSG00000210191.1	+	Mt_tRNA	KNOWN	MT-TL2	1	1	NA
chrM	12337	14148	13242	ENSG00000198786.2	+	protein_coding	KNOWN	MT-ND5	1	1	NA
chrM	14149	14673	14411	ENSG00000198695.2	-	protein_coding	KNOWN	MT-ND6	1	1	NA
chrM	14674	14742	14708	ENSG00000210194.1	-	Mt_tRNA	KNOWN	MT-TE	1	1	NA
chrM	14747	15887	15317	ENSG00000198727.2	+	protein_coding	KNOWN	MT-CYB	1	1	NA
chrM	15888	15953	15920	ENSG00000210195.2	+	Mt_tRNA	KNOWN	MT-TT	1	1	NA
chrM	15956	16023	15989	ENSG00000210196.2	-	Mt_tRNA	KNOWN	MT-TP	1	1	NA
chrUn_GL000195v1	37434	37534	37484	ENSG00000277428.1	-	misc_RNA	NOVEL	Y_RNA	1	1	NA
chrUn_GL000195v1	42939	49164	46051	ENSG00000276256.1	-	protein_coding	KNOWN	AC011043.1	1	2	NA
chrUn_GL000195v1	173872	179372	176622	ENSG00000278198.1	+	protein_coding	NOVEL	AC011043.2	1	4	NA
chrUn_GL000213v1	25283	25368	25325	ENSG00000278018.1	-	miRNA	KNOWN	hsa-mir-8069-1	1	1	NA
chrUn_GL000213v1	104742	104817	104779	ENSG00000278269.1	+	miRNA	KNOWN	hsa-mir-3118-1	1	1	NA
chrUn_GL000213v1	108007	139659	123833	ENSG00000277630.4	-	protein_coding	KNOWN	BX072566.1	2	11	NA
chrUn_GL000213v1	127840	127946	127893	ENSG00000278793.1	-	snRNA	NOVEL	U6	1	1	NA
chrUn_GL000216v2	93197	93309	93253	ENSG00000274202.1	-	snRNA	NOVEL	U2	1	1	NA
chrUn_GL000216v2	144572	144655	144613	ENSG00000278835.1	+	miRNA	NOVEL	BX546479.2	1	1	NA
chrUn_GL000216v2	171820	171902	171861	ENSG00000274907.1	+	miRNA	NOVEL	BX546479.1	1	1	NA
chrUn_GL000218v1	51867	54893	53380	ENSG00000278384.1	-	protein_coding	KNOWN	AL354822.1	1	1	NA
chrUn_GL000219v1	47191	47266	47228	ENSG00000274781.1	-	miRNA	NOVEL	AL592183.3	1	1	NA
chrUn_GL000219v1	54224	83311	68767	ENSG00000273748.1	-	protein_coding	NOVEL	AL592183.1	1	4	NA
chrUn_GL000219v1	163853	163928	163890	ENSG00000274318.1	+	miRNA	NOVEL	AL592183.2	1	1	NA
chrUn_GL000219v1	164278	164360	164319	ENSG00000276028.1	+	miRNA	NOVEL	AL592183.6	1	1	NA
chrUn_GL000219v1	168106	168180	168143	ENSG00000275973.1	+	miRNA	NOVEL	AL592183.5	1	1	NA
chrUn_GL000219v1	171364	171439	171401	ENSG00000275187.1	+	miRNA	NOVEL	AL592183.4	1	1	NA
chrUn_GL000219v1	173994	174069	174031	ENSG00000278836.1	+	miRNA	NOVEL	AL592183.7	1	1	NA
chrUn_GL000220v1	100714	100791	100752	ENSG00000276010.1	+	miRNA	NOVEL	AL592188.5	1	1	NA
chrUn_GL000220v1	104732	104823	104777	ENSG00000274908.1	+	miRNA	KNOWN	hsa-mir-6724-1	1	1	NA
chrUn_GL000220v1	105287	105376	105331	ENSG00000276197.1	+	misc_RNA	NOVEL	pRNA	1	1	NA
chrUn_GL000220v1	107448	107561	107504	ENSG00000278163.1	+	miRNA	NOVEL	AL592188.9	1	1	NA
chrUn_GL000220v1	107909	108088	107998	ENSG00000278354.1	+	miRNA	NOVEL	AL592188.10	1	1	NA
chrUn_GL000220v1	108280	108340	108310	ENSG00000278777.1	+	miRNA	NOVEL	AL592188.12	1	1	NA
chrUn_GL000220v1	112025	112177	112101	ENSG00000274917.1	+	rRNA	KNOWN	RNA5-8S5	1	1	NA
chrUn_GL000220v1	114151	114242	114196	ENSG00000278436.1	+	miRNA	NOVEL	AL592188.11	1	1	NA
chrUn_GL000220v1	117428	117476	117452	ENSG00000274482.1	+	miRNA	NOVEL	AL592188.3	1	1	NA
chrUn_GL000220v1	118197	118253	118225	ENSG00000276736.1	+	miRNA	NOVEL	AL592188.6	1	1	NA
chrUn_GL000220v1	148704	148795	148749	ENSG00000275755.1	+	miRNA	KNOWN	hsa-mir-6724-1	1	1	NA
chrUn_GL000220v1	149259	149348	149303	ENSG00000273937.1	+	misc_RNA	NOVEL	pRNA	1	1	NA
chrUn_GL000220v1	151420	151533	151476	ENSG00000274030.1	+	miRNA	NOVEL	AL592188.2	1	1	NA
chrUn_GL000220v1	151881	152060	151970	ENSG00000274974.1	+	miRNA	NOVEL	AL592188.4	1	1	NA
chrUn_GL000220v1	152252	152312	152282	ENSG00000273548.1	+	miRNA	NOVEL	AL592188.1	1	1	NA
chrUn_GL000220v1	155997	156149	156073	ENSG00000273730.1	+	rRNA	KNOWN	RNA5-8S5	1	1	NA
chrUn_GL000220v1	158123	158214	158168	ENSG00000277145.1	+	miRNA	NOVEL	AL592188.7	1	1	NA
chrUn_GL000220v1	161400	161448	161424	ENSG00000277658.1	+	miRNA	NOVEL	AL592188.8	1	1	NA
chrUn_GL000224v1	38211	38291	38251	ENSG00000275169.1	+	miRNA	NOVEL	AL591856.5	1	1	NA
chrUn_GL000224v1	43376	43458	43417	ENSG00000273620.1	+	miRNA	NOVEL	AL591856.1	1	1	NA
chrUn_GL000224v1	47211	47293	47252	ENSG00000274573.1	+	miRNA	NOVEL	AL591856.4	1	1	NA
chrUn_GL000224v1	126781	126862	126821	ENSG00000274285.1	-	miRNA	NOVEL	AL591856.3	1	1	NA
chrUn_GL000224v1	137252	137327	137289	ENSG00000273815.1	-	miRNA	NOVEL	AL591856.2	1	1	NA
chrUn_GL000224v1	165117	165199	165158	ENSG00000275907.1	+	miRNA	NOVEL	AL591856.7	1	1	NA
chrUn_GL000224v1	166714	166794	166754	ENSG00000275189.1	+	miRNA	NOVEL	AL591856.6	1	1	NA
chrUn_KI270442v1	217250	217401	217325	ENSG00000278294.1	-	rRNA	NOVEL	5_8S_rRNA	1	1	NA
chrUn_KI270442v1	221098	221212	221155	ENSG00000274558.1	-	miRNA	NOVEL	ABBA01037345.1	1	1	NA
chrUn_KI270442v1	241502	241574	241538	ENSG00000275477.1	+	miRNA	NOVEL	ABBA01037346.1	1	1	NA
chrUn_KI270442v1	380608	380726	380667	ENSG00000278457.1	+	rRNA	NOVEL	5S_rRNA	1	1	NA
chrUn_KI270442v1	386824	386903	386863	ENSG00000276453.1	-	miRNA	NOVEL	ABBA01037349.1	1	1	NA
chrUn_KI270741v1	68656	68737	68696	ENSG00000277536.1	-	miRNA	NOVEL	AUXG01000515.1	1	1	NA
chrUn_KI270741v1	79127	79202	79164	ENSG00000277659.1	-	miRNA	NOVEL	AUXG01000515.2	1	1	NA
chrUn_KI270741v1	107173	107255	107214	ENSG00000274085.1	+	miRNA	NOVEL	AUXG01000516.1	1	1	NA
chrUn_KI270741v1	108770	108850	108810	ENSG00000275766.1	+	miRNA	NOVEL	AUXG01000516.2	1	1	NA
chrUn_KI270741v1	118231	118313	118272	ENSG00000276671.1	+	miRNA	NOVEL	AUXG01000517.1	1	1	NA
chrUn_KI270741v1	121285	121368	121326	ENSG00000276679.1	+	miRNA	NOVEL	AUXG01000518.1	1	1	NA
chrUn_KI270743v1	102972	103054	103013	ENSG00000278721.1	+	miRNA	NOVEL	AC138775.5	1	1	NA
chrUn_KI270743v1	103165	103246	103205	ENSG00000278024.1	+	miRNA	NOVEL	AC138775.3	1	1	NA
chrUn_KI270743v1	103981	104063	104022	ENSG00000278241.1	+	miRNA	NOVEL	AC138775.4	1	1	NA
chrUn_KI270743v1	105509	105591	105550	ENSG00000276207.1	+	miRNA	NOVEL	AC138775.1	1	1	NA
chrUn_KI270743v1	116726	116802	116764	ENSG00000278015.2	+	miRNA	NOVEL	AC138775.2	1	1	NA
chrUn_KI270744v1	51009	51114	51061	ENSG00000278625.1	-	snRNA	NOVEL	U6	1	1	NA
chrUn_KI270744v1	129039	129147	129093	ENSG00000274938.1	-	miRNA	NOVEL	AC237676.1	1	1	NA
chrUn_KI270750v1	148668	148843	148755	ENSG00000277374.1	+	snRNA	NOVEL	U1	1	1	NA
chrUn_KI270752v1	144	268	206	ENSG00000278806.1	+	miRNA	NOVEL	AF065393.4	1	1	NA
chrUn_KI270752v1	3497	3623	3560	ENSG00000274152.1	-	miRNA	NOVEL	AF065393.1	1	1	NA
chrUn_KI270752v1	9943	10067	10005	ENSG00000276666.1	-	miRNA	NOVEL	AF065393.2	1	1	NA
chrUn_KI270752v1	21813	21944	21878	ENSG00000277917.1	+	miRNA	NOVEL	AF065393.3	1	1	NA
chrX	253743	255091	254417	ENSG00000228572.7	+	unprocessed_pseudogene	KNOWN	LL0YNC03-29C1.1	1	2	0.197786
chrX	276322	303356	289839	ENSG00000182378.13	+	protein_coding	KNOWN	PLCXD1	11	8	0.819624
chrX	304529	318819	311674	ENSG00000178605.13	-	protein_coding	KNOWN	GTPBP6	2	10	0.798597
chrX	320990	321851	321420	ENSG00000226179.6	+	antisense	KNOWN	LINC00685	1	2	0.826180
chrX	333963	386955	360459	ENSG00000167393.17	-	protein_coding	KNOWN	PPP2R3B	10	13	1.018250
chrX	386980	405579	396279	ENSG00000281849.3	+	antisense	KNOWN	RP13-465B17.4	1	2	0.825670
chrX	388100	388389	388244	ENSG00000275287.5	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.099897
chrX	419157	421980	420568	ENSG00000280767.3	+	lincRNA	KNOWN	RP13-465B17.5	1	2	0.639480
chrX	523775	524102	523938	ENSG00000234958.6	-	processed_pseudogene	KNOWN	FABP5P13	1	1	0.550098
chrX	545236	545352	545294	ENSG00000229232.6	-	processed_pseudogene	KNOWN	KRT18P53	1	1	0.528091
chrX	624344	659411	641877	ENSG00000185960.13	+	protein_coding	KNOWN	SHOX	4	6	1.059705
chrX	990221	994365	992293	ENSG00000237531.6	+	lincRNA	KNOWN	RP11-309M23.1	1	2	0.492171
chrX	1008503	1010101	1009302	ENSG00000225661.7	-	processed_pseudogene	KNOWN	RPL14P5	1	3	0.468287
chrX	1187549	1212750	1200149	ENSG00000205755.11	-	protein_coding	KNOWN	CRLF2	4	9	0.880085
chrX	1268800	1310381	1289590	ENSG00000198223.15	+	protein_coding	KNOWN	CSF2RA	20	14	0.711238
chrX	1291755	1291828	1291791	ENSG00000264510.6	+	miRNA	NOVEL	BX649553.3	1	1	0.733857
chrX	1292094	1292167	1292130	ENSG00000264819.6	+	miRNA	NOVEL	BX649553.4	1	1	0.733857
chrX	1293615	1293689	1293652	ENSG00000263980.6	+	miRNA	NOVEL	BX649553.2	1	1	0.733857
chrX	1293918	1293992	1293955	ENSG00000265658.6	+	miRNA	KNOWN	MIR3690	1	1	0.733857
chrX	1294132	1294206	1294169	ENSG00000263835.6	+	miRNA	NOVEL	BX649553.1	1	1	0.733857
chrX	1300256	1300375	1300315	ENSG00000223274.6	-	rRNA	KNOWN	RNA5SP498	1	1	0.733857
chrX	1336616	1382689	1359652	ENSG00000185291.11	+	protein_coding	KNOWN	IL3RA	3	12	0.746828
chrX	1386152	1392724	1389438	ENSG00000169100.13	-	protein_coding	KNOWN	SLC25A6	3	4	0.882532
chrX	1396427	1399402	1397914	ENSG00000236871.7	+	lincRNA	KNOWN	LINC00106	2	3	1.183914
chrX	1401769	1414028	1407898	ENSG00000236017.8	+	antisense	KNOWN	ASMTL-AS1	5	4	1.150731
chrX	1403139	1453762	1428450	ENSG00000169093.15	-	protein_coding	KNOWN	ASMTL	6	13	0.952821
chrX	1462572	1537107	1499839	ENSG00000182162.10	-	protein_coding	KNOWN	P2RY8	2	2	0.518511
chrX	1591593	1602514	1597053	ENSG00000197976.11	+	protein_coding	KNOWN	AKAP17A	3	6	0.454562
chrX	1615001	1643081	1629041	ENSG00000196433.12	+	protein_coding	KNOWN	ASMT	5	9	0.532145
chrX	1732584	1755985	1744284	ENSG00000223511.6	+	lincRNA	KNOWN	RP13-297E16.4	2	3	0.054021
chrX	1767347	1768776	1768061	ENSG00000234622.6	+	lincRNA	KNOWN	RP13-297E16.5	1	2	0.130127
chrX	2219516	2502805	2361160	ENSG00000169084.13	-	protein_coding	KNOWN	DHRSX	7	7	0.349381
chrX	2334295	2336410	2335352	ENSG00000223571.6	-	sense_intronic	KNOWN	DHRSX-IT1	1	2	0.246966
chrX	2486414	2500967	2493690	ENSG00000214717.10	-	protein_coding	KNOWN	ZBED1	5	2	0.559625
chrX	2609191	2609254	2609222	ENSG00000277120.5	+	miRNA	KNOWN	MIR6089	1	1	0.670854
chrX	2609348	2657229	2633288	ENSG00000223773.7	+	transcribed_unprocessed_pseudogene	KNOWN	CD99P1	5	10	0.435017
chrX	2612988	2615347	2614167	ENSG00000230542.6	-	lincRNA	KNOWN	LINC00102	1	2	0.485137
chrX	2691179	2741309	2716244	ENSG00000002586.18	+	protein_coding	KNOWN	CD99	12	11	0.671627
chrX	2752050	2815927	2783988	ENSG00000124343.12	+	protein_coding	KNOWN	XG	5	11	0.443372
chrX	2828788	2882818	2855803	ENSG00000056998.18	+	protein_coding	KNOWN	GYG2	8	12	0.075503
chrX	2852740	2853760	2853250	ENSG00000235483.1	-	antisense	KNOWN	GYG2-AS1	1	2	-0.107317
chrX	2903970	2929351	2916660	ENSG00000006756.15	-	protein_coding	KNOWN	ARSD	7	10	0.344814
chrX	2904904	2906081	2905492	ENSG00000229851.1	+	antisense	KNOWN	ARSD-AS1	1	2	0.442489
chrX	2934632	2968310	2951471	ENSG00000157399.14	-	protein_coding	KNOWN	ARSE	6	12	0.469144
chrX	3006613	3033571	3020092	ENSG00000205667.2	+	protein_coding	KNOWN	ARSH	1	9	0.118954
chrX	3041471	3112726	3077098	ENSG00000062096.14	+	protein_coding	KNOWN	ARSF	2	11	0.099018
chrX	3058220	3058502	3058361	ENSG00000239228.3	-	misc_RNA	KNOWN	RN7SL578P	1	1	0.261917
chrX	3112900	3113596	3113248	ENSG00000230249.1	-	processed_pseudogene	KNOWN	RP13-824C8.2	1	2	0.063137
chrX	3188166	3188251	3188208	ENSG00000278560.1	+	miRNA	NOVEL	AC079172.1	1	1	0.241135
chrX	3271820	3284653	3278236	ENSG00000228459.3	+	lincRNA	KNOWN	LINC01546	1	3	0.300309
chrX	3308565	3346641	3327603	ENSG00000101825.7	-	protein_coding	KNOWN	MXRA5	1	7	0.341819
chrX	3367149	3368382	3367765	ENSG00000213487.3	+	processed_pseudogene	KNOWN	ASS1P4	1	1	0.610123
chrX	3532117	3532251	3532184	ENSG00000212214.1	-	snoRNA	NOVEL	SNORA48	1	1	0.213982
chrX	3572857	3572961	3572909	ENSG00000207435.1	+	snRNA	KNOWN	RNU6-114P	1	1	0.075118
chrX	3604370	3713608	3658989	ENSG00000183943.5	-	protein_coding	KNOWN	PRKX	4	9	0.276859
chrX	3607258	3607365	3607311	ENSG00000207332.1	-	snRNA	KNOWN	RNU6-146P	1	1	0.658576
chrX	3641443	3641555	3641499	ENSG00000207320.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.362846
chrX	3659487	3668192	3663839	ENSG00000236188.1	+	antisense	KNOWN	PRKX-AS1	1	3	0.198907
chrX	3717149	3717600	3717374	ENSG00000182888.5	+	processed_pseudogene	KNOWN	RP11-558O12.1	1	1	0.752505
chrX	3817528	3843857	3830692	ENSG00000205664.10	-	lincRNA	KNOWN	RP11-706O15.1	8	5	0.535593
chrX	3853010	3882317	3867663	ENSG00000234449.2	-	lincRNA	KNOWN	RP11-706O15.3	3	3	0.231895
chrX	3891438	3920746	3906092	ENSG00000205663.5	-	lincRNA	KNOWN	RP11-706O15.5	3	3	-0.188522
chrX	3929869	3937855	3933862	ENSG00000205662.2	-	lincRNA	KNOWN	RP11-706O15.7	1	2	0.475654
chrX	3953056	3953561	3953308	ENSG00000225722.1	+	processed_pseudogene	KNOWN	RP11-706O15.8	1	2	-0.479165
chrX	4583422	4583500	4583461	ENSG00000264861.1	-	miRNA	NOVEL	AC108683.1	1	1	-0.234236
chrX	4627200	4633572	4630386	ENSG00000236513.1	-	lincRNA	KNOWN	RP11-707P20.1	1	3	-0.470011
chrX	4718793	4718914	4718853	ENSG00000222834.1	-	miRNA	NOVEL	AC074035.1	1	1	-0.082038
chrX	5168918	5169439	5169178	ENSG00000235039.1	-	processed_pseudogene	KNOWN	MTND6P12	1	1	-0.650850
chrX	5169512	5170645	5170078	ENSG00000226313.1	+	processed_pseudogene	KNOWN	MTCYBP12	1	1	-0.448685
chrX	5305714	5307128	5306421	ENSG00000238193.1	-	processed_pseudogene	KNOWN	RP11-555H23.1	1	1	-0.333772
chrX	5410122	5410251	5410186	ENSG00000201660.1	+	snoRNA	NOVEL	SNORA20	1	1	-0.081656
chrX	5653421	5726305	5689863	ENSG00000236120.6	-	lincRNA	KNOWN	RP11-733O18.1	2	4	-0.296336
chrX	5840637	6228863	6034750	ENSG00000146938.14	-	protein_coding	KNOWN	NLGN4X	8	7	-0.359453
chrX	6061644	6061749	6061696	ENSG00000252291.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.769032
chrX	6383906	6383963	6383934	ENSG00000265284.1	-	miRNA	KNOWN	MIR4770	1	1	-0.154648
chrX	6422092	6422701	6422396	ENSG00000237730.1	-	processed_pseudogene	KNOWN	RP11-459A10.1	1	1	-0.542359
chrX	6514643	6514742	6514692	ENSG00000274521.1	-	miRNA	NOVEL	AC078991.1	1	1	-0.115813
chrX	6533618	6535118	6534368	ENSG00000169059.12	-	protein_coding	KNOWN	VCX3A	3	5	-0.517218
chrX	6667865	6721544	6694704	ENSG00000231217.1	-	lincRNA	KNOWN	RP11-1M18.1	1	3	-0.232904
chrX	6989329	6989783	6989556	ENSG00000237490.3	+	processed_pseudogene	KNOWN	RP13-926M18.1	1	1	0.122365
chrX	7048920	7148190	7098555	ENSG00000130021.13	-	protein_coding	KNOWN	PUDP	6	5	0.113333
chrX	7113005	7113404	7113204	ENSG00000228550.1	-	processed_pseudogene	KNOWN	RP11-483M24.2	1	1	0.220316
chrX	7147860	7147937	7147898	ENSG00000264268.1	+	miRNA	KNOWN	MIR4767	1	1	0.172610
chrX	7219456	7354810	7287133	ENSG00000101846.6	+	protein_coding	KNOWN	STS	1	10	-0.057515
chrX	7489659	7491199	7490429	ENSG00000279682.1	+	TEC	KNOWN	RP11-791N19.1	1	1	-0.323346
chrX	7842262	7844143	7843202	ENSG00000182583.12	+	protein_coding	KNOWN	VCX	3	6	-0.545438
chrX	7896514	7896722	7896618	ENSG00000274923.1	-	unprocessed_pseudogene	KNOWN	GS1-214D18.3	1	1	-0.275217
chrX	7898247	7927739	7912993	ENSG00000006757.11	-	protein_coding	KNOWN	PNPLA4	4	7	-0.272427
chrX	8007378	8018160	8012769	ENSG00000230394.1	+	lincRNA	KNOWN	RP11-692P14.1	1	2	-0.301600
chrX	8126960	8127068	8127014	ENSG00000207628.2	+	miRNA	KNOWN	MIR651	1	1	-0.283048
chrX	8169944	8171267	8170605	ENSG00000177504.10	-	protein_coding	KNOWN	VCX2	1	3	-0.331434
chrX	8464830	8466510	8465670	ENSG00000205642.9	+	protein_coding	KNOWN	VCX3B	4	5	-0.564054
chrX	8528874	8732187	8630530	ENSG00000011201.10	-	protein_coding	KNOWN	ANOS1	4	17	-0.418178
chrX	8783514	8784461	8783987	ENSG00000225574.1	-	processed_pseudogene	KNOWN	DRAXINP1	1	1	-0.389877
chrX	8790795	8801383	8796089	ENSG00000183304.10	-	protein_coding	KNOWN	FAM9A	2	10	0.164142
chrX	8856665	8857059	8856862	ENSG00000231619.1	-	processed_pseudogene	KNOWN	GS1-542M4.3	1	1	-0.458701
chrX	8863861	8867601	8865731	ENSG00000229012.1	-	lincRNA	KNOWN	GS1-542M4.4	1	3	-0.458701
chrX	8980425	8982505	8981465	ENSG00000225271.1	-	processed_pseudogene	KNOWN	RP11-66N5.2	1	1	-0.250400
chrX	9024232	9164639	9094435	ENSG00000177138.15	-	protein_coding	KNOWN	FAM9B	6	11	-0.026747
chrX	9133828	9133946	9133887	ENSG00000200852.1	+	rRNA	KNOWN	RNA5SP499	1	1	0.230968
chrX	9179385	9179606	9179495	ENSG00000219870.2	+	processed_pseudogene	KNOWN	RP11-430A19.2	1	1	0.060965
chrX	9249920	9275206	9262563	ENSG00000228543.1	+	lincRNA	KNOWN	GS1-519E5.1	1	2	0.101248
chrX	9402751	9404802	9403776	ENSG00000232111.2	+	processed_pseudogene	KNOWN	RP11-126O22.1	1	2	0.108111
chrX	9404954	9405731	9405342	ENSG00000282306.1	+	processed_pseudogene	KNOWN	RP11-126O22.2	1	1	0.108111
chrX	9406025	9406778	9406401	ENSG00000282501.1	+	processed_pseudogene	KNOWN	RP11-126O22.3	1	1	0.108111
chrX	9406952	9407708	9407330	ENSG00000282358.1	+	processed_pseudogene	KNOWN	RP11-126O22.4	1	1	0.108111
chrX	9407861	9408638	9408249	ENSG00000282668.1	+	processed_pseudogene	KNOWN	RP11-126O22.5	1	1	0.108111
chrX	9408818	9409571	9409194	ENSG00000282299.1	+	processed_pseudogene	KNOWN	RP11-126O22.6	1	1	0.108111
chrX	9409748	9410501	9410124	ENSG00000282697.1	+	processed_pseudogene	KNOWN	RP11-126O22.7	1	1	0.116041
chrX	9410789	9411545	9411167	ENSG00000282222.1	+	processed_pseudogene	KNOWN	RP11-126O22.8	1	1	0.120006
chrX	9411701	9412478	9412089	ENSG00000281955.1	+	processed_pseudogene	KNOWN	RP11-126O22.9	1	1	0.120006
chrX	9412772	9413522	9413147	ENSG00000281941.1	+	processed_pseudogene	KNOWN	RP11-126O22.10	1	1	0.120006
chrX	9413816	9414569	9414192	ENSG00000282300.1	+	processed_pseudogene	KNOWN	RP11-126O22.11	1	1	0.120006
chrX	9463295	9719743	9591519	ENSG00000101849.15	+	protein_coding	KNOWN	TBL1X	9	18	0.269548
chrX	9725346	9786297	9755821	ENSG00000101850.12	-	protein_coding	KNOWN	GPR143	5	9	0.049867
chrX	9786456	9949443	9867949	ENSG00000146950.12	+	protein_coding	KNOWN	SHROOM2	4	10	0.262864
chrX	9818239	9819469	9818854	ENSG00000215319.2	-	processed_pseudogene	KNOWN	EIF5P1	1	1	0.076885
chrX	9865093	9865543	9865318	ENSG00000230326.1	-	processed_pseudogene	KNOWN	HMGN1P33	1	1	0.091992
chrX	9874601	9874701	9874651	ENSG00000206844.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.494956
chrX	9967358	9968352	9967855	ENSG00000234469.4	+	protein_coding	KNOWN	CLDN34	1	1	0.247643
chrX	10015562	10144478	10080020	ENSG00000047644.17	+	protein_coding	KNOWN	WWC3	3	24	0.425905
chrX	10024842	10038654	10031748	ENSG00000225076.1	-	antisense	KNOWN	WWC3-AS1	1	2	0.579853
chrX	10061222	10061323	10061272	ENSG00000202469.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.222052
chrX	10156945	10237660	10197302	ENSG00000073464.11	+	protein_coding	KNOWN	CLCN4	4	13	0.350847
chrX	10216598	10216699	10216648	ENSG00000222133.1	-	miRNA	NOVEL	AC003666.1	1	1	0.075504
chrX	10242339	10365323	10303831	ENSG00000227042.1	+	lincRNA	KNOWN	RP6-1O2.1	1	5	0.021079
chrX	10445310	10833654	10639482	ENSG00000101871.14	-	protein_coding	KNOWN	MID1	12	11	0.086366
chrX	10582817	10582919	10582868	ENSG00000207202.1	+	snRNA	KNOWN	RNU6-800P	1	1	0.393648
chrX	10847877	11111141	10979509	ENSG00000234129.7	-	lincRNA	KNOWN	RP11-120D5.1	4	5	-0.022197
chrX	11111301	11123078	11117189	ENSG00000004961.14	+	protein_coding	KNOWN	HCCS	3	7	-0.064513
chrX	11116092	11116193	11116142	ENSG00000207151.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.064513
chrX	11137543	11665701	11401622	ENSG00000047648.21	-	protein_coding	KNOWN	ARHGAP6	8	15	-0.149124
chrX	11148584	11148769	11148676	ENSG00000278218.1	-	misc_RNA	NOVEL	uc_338	1	1	0.169160
chrX	11221348	11225731	11223539	ENSG00000275194.1	+	unprocessed_pseudogene	KNOWN	RP1-27C22.1	1	4	0.117527
chrX	11293413	11300761	11297087	ENSG00000125363.14	+	protein_coding	KNOWN	AMELX	3	7	0.180528
chrX	11318614	11318686	11318650	ENSG00000263652.1	-	miRNA	KNOWN	MIR548AX	1	1	-0.098339
chrX	11334233	11335901	11335067	ENSG00000232392.1	-	processed_pseudogene	KNOWN	AC002366.3	1	2	-0.242427
chrX	11465953	11466138	11466045	ENSG00000274077.1	+	miRNA	NOVEL	AC002366.1	1	1	0.228053
chrX	11668401	11757718	11713059	ENSG00000282840.1	-	lincRNA	KNOWN	GS1-590J6.3	1	4	-0.248258
chrX	11704123	11705590	11704856	ENSG00000223418.1	-	processed_pseudogene	KNOWN	GS1-590J6.2	1	1	-0.387618
chrX	11758159	11775753	11766956	ENSG00000005302.17	+	protein_coding	KNOWN	MSL3	17	13	-0.182092
chrX	12054824	12054926	12054875	ENSG00000206792.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.369588
chrX	12138466	12724523	12431494	ENSG00000169933.12	+	protein_coding	KNOWN	FRMPD4	2	17	-0.039781
chrX	12148318	12148401	12148359	ENSG00000252111.1	-	miRNA	NOVEL	AC002981.1	1	1	0.040153
chrX	12149126	12149238	12149182	ENSG00000206795.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.040153
chrX	12373167	12375133	12374150	ENSG00000223487.1	-	antisense	KNOWN	FRMPD4-AS1	1	2	0.391552
chrX	12395757	12396167	12395962	ENSG00000231211.2	-	processed_pseudogene	KNOWN	RPL17P49	1	1	-0.145700
chrX	12583415	12583526	12583470	ENSG00000273800.1	-	unprocessed_pseudogene	KNOWN	RP11-1J4.1	1	1	-0.274791
chrX	12614003	12614197	12614100	ENSG00000271814.1	-	misc_RNA	KNOWN	RN7SKP290	1	1	-0.309625
chrX	12791355	12824222	12807788	ENSG00000101911.12	+	protein_coding	KNOWN	PRPS2	5	7	0.148454
chrX	12825840	12826833	12826336	ENSG00000229083.1	+	processed_pseudogene	KNOWN	PSMA6P2	1	2	0.091992
chrX	12844865	12845430	12845147	ENSG00000230691.1	-	processed_pseudogene	KNOWN	MRPL35P4	1	1	0.007600
chrX	12867083	12890380	12878731	ENSG00000196664.4	+	protein_coding	KNOWN	TLR7	2	3	-0.145010
chrX	12902817	12908333	12905575	ENSG00000233338.1	-	antisense	KNOWN	TLR8-AS1	1	3	-0.087558
chrX	12906620	12923169	12914894	ENSG00000101916.11	+	protein_coding	KNOWN	TLR8	2	3	-0.108966
chrX	12975108	12977227	12976167	ENSG00000205542.10	+	protein_coding	KNOWN	TMSB4X	4	3	0.760786
chrX	13035618	13044682	13040150	ENSG00000187268.11	-	protein_coding	KNOWN	FAM9C	5	8	0.060283
chrX	13093660	13094573	13094116	ENSG00000261030.1	+	lincRNA	KNOWN	RP11-791M20.1	1	1	0.214849
chrX	13266048	13303452	13284750	ENSG00000235385.1	-	lincRNA	KNOWN	GS1-600G8.5	2	3	0.060640
chrX	13310652	13319933	13315292	ENSG00000231216.1	+	antisense	KNOWN	GS1-600G8.3	1	17	0.206163
chrX	13318236	13319952	13319094	ENSG00000123594.4	-	protein_coding	KNOWN	ATXN3L	2	3	0.206163
chrX	13327937	13329867	13328902	ENSG00000235592.1	+	unprocessed_pseudogene	KNOWN	GS1-600G8.4	1	6	0.206163
chrX	13335241	13373634	13354437	ENSG00000226985.5	+	lincRNA	KNOWN	LINC01203	2	7	0.385266
chrX	13377188	13403019	13390103	ENSG00000226434.1	+	lincRNA	KNOWN	RP11-1L9.1	2	2	0.266585
chrX	13378735	13379340	13379037	ENSG00000197582.5	-	processed_pseudogene	KNOWN	GPX1P1	1	1	0.135061
chrX	13569605	13633575	13601590	ENSG00000198759.11	+	protein_coding	KNOWN	EGFL6	3	12	0.037794
chrX	13574746	13575066	13574906	ENSG00000233357.2	+	processed_pseudogene	KNOWN	RPL30P15	1	1	0.179455
chrX	13596236	13596548	13596392	ENSG00000199622.1	+	misc_RNA	KNOWN	RN7SKP20	1	1	-0.154169
chrX	13653189	13681964	13667576	ENSG00000176896.8	+	protein_coding	KNOWN	TCEANC	5	5	0.015953
chrX	13689121	13710506	13699813	ENSG00000123595.6	+	protein_coding	KNOWN	RAB9A	3	3	0.024824
chrX	13712244	13734635	13723439	ENSG00000196459.13	-	protein_coding	KNOWN	TRAPPC2	8	6	0.218057
chrX	13734745	13769353	13752049	ENSG00000046651.14	+	protein_coding	KNOWN	OFD1	9	24	-0.017539
chrX	13771031	13938638	13854834	ENSG00000046653.14	-	protein_coding	KNOWN	GPM6B	11	9	-0.307383
chrX	13955393	13963904	13959648	ENSG00000233535.1	+	lincRNA	KNOWN	RP1-122K4.2	1	2	0.001794
chrX	13980066	13988820	13984443	ENSG00000212663.2	-	lincRNA	KNOWN	RP1-122K4.3	1	2	-0.332506
chrX	14008279	14029893	14019086	ENSG00000046647.13	-	protein_coding	KNOWN	GEMIN8	5	5	-0.348175
chrX	14244382	14244928	14244655	ENSG00000233247.3	+	processed_pseudogene	KNOWN	GS1-257G1.1	1	1	-0.528160
chrX	14529298	14731812	14630555	ENSG00000101958.13	+	protein_coding	KNOWN	GLRA2	4	11	-0.270992
chrX	14764975	14765117	14765046	ENSG00000221278.1	-	miRNA	NOVEL	AC003658.1	1	1	0.156122
chrX	14834476	14835319	14834897	ENSG00000231066.3	-	processed_pseudogene	KNOWN	NPM1P9	1	1	0.043082
chrX	14843407	14873069	14858238	ENSG00000181544.13	-	protein_coding	KNOWN	FANCB	4	10	-0.060043
chrX	14873441	14922327	14897884	ENSG00000130150.11	+	protein_coding	KNOWN	MOSPD2	6	15	-0.025989
chrX	14977959	14978463	14978211	ENSG00000235929.1	-	processed_pseudogene	KNOWN	TPT1P14	1	1	-0.188116
chrX	15117437	15117768	15117602	ENSG00000236929.2	-	processed_pseudogene	KNOWN	RP11-699A7.1	1	1	-0.470603
chrX	15235288	15270467	15252877	ENSG00000102048.15	-	protein_coding	KNOWN	ASB9	9	8	-0.018110
chrX	15281697	15315656	15298676	ENSG00000165192.13	-	protein_coding	KNOWN	ASB11	4	8	-0.060581
chrX	15319451	15335580	15327515	ENSG00000165195.14	-	protein_coding	KNOWN	PIGA	15	6	0.051682
chrX	15345591	15384376	15364983	ENSG00000165197.4	-	protein_coding	KNOWN	FIGF	2	7	-0.246863
chrX	15384799	15493564	15439181	ENSG00000087842.10	-	protein_coding	KNOWN	PIR	6	10	-0.104942
chrX	15464246	15556529	15510387	ENSG00000102010.14	+	protein_coding	KNOWN	BMX	5	19	-0.395080
chrX	15561033	15602148	15581590	ENSG00000130234.10	-	protein_coding	KNOWN	ACE2	5	19	-0.281621
chrX	15602881	15621484	15612182	ENSG00000225833.1	+	antisense	KNOWN	GS1-594A7.3	1	2	-0.426753
chrX	15627318	15665031	15646174	ENSG00000147003.5	-	protein_coding	KNOWN	TMEM27	1	6	-0.574025
chrX	15646167	15646875	15646521	ENSG00000237539.1	-	processed_pseudogene	KNOWN	GS1-594A7.5	1	2	-0.707096
chrX	15674932	15703724	15689328	ENSG00000186312.10	+	transcribed_unprocessed_pseudogene	KNOWN	CA5BP1	6	6	0.107862
chrX	15688830	15788409	15738619	ENSG00000169239.12	+	protein_coding	KNOWN	CA5B	10	8	0.076076
chrX	15702602	15703243	15702922	ENSG00000279413.1	-	pseudogene	NOVEL	AC112497.1	1	2	0.107589
chrX	15716208	15716346	15716277	ENSG00000200620.1	+	snoRNA	NOVEL	SNORA7	1	1	0.124413
chrX	15716262	15716364	15716313	ENSG00000281119.1	+	miRNA	NOVEL	AC112497.2	1	1	0.124413
chrX	15785716	15787589	15786652	ENSG00000281371.1	-	antisense	KNOWN	INE2	1	1	0.017991
chrX	15790472	15823260	15806866	ENSG00000169249.12	+	protein_coding	KNOWN	ZRSR2	3	11	0.024447
chrX	15825806	15855014	15840410	ENSG00000182287.13	-	protein_coding	KNOWN	AP1S2	6	6	0.110950
chrX	15916189	15916303	15916246	ENSG00000200566.1	-	snRNA	KNOWN	RNU5F-7P	1	1	-0.393435
chrX	15917548	15918631	15918089	ENSG00000226536.1	+	processed_pseudogene	KNOWN	SETP15	1	2	-0.393435
chrX	16123556	16153021	16138288	ENSG00000126010.5	+	protein_coding	KNOWN	GRPR	1	3	-0.088922
chrX	16152941	16170869	16161905	ENSG00000238178.6	-	antisense	KNOWN	RP11-431J24.2	3	6	-0.310052
chrX	16167481	16171464	16169472	ENSG00000182798.10	+	protein_coding	KNOWN	MAGEB17	2	3	-0.159768
chrX	16198428	16199289	16198858	ENSG00000215313.3	-	processed_pseudogene	KNOWN	RPL6P30	1	1	0.243995
chrX	16298390	16298474	16298432	ENSG00000252648.1	+	miRNA	NOVEL	AC078993.1	1	1	-0.305768
chrX	16474342	16475340	16474841	ENSG00000235071.1	-	processed_pseudogene	KNOWN	RP11-759L5.2	1	1	-0.226370
chrX	16539137	16539439	16539288	ENSG00000239333.3	-	misc_RNA	KNOWN	RN7SL658P	1	1	-0.309107
chrX	16588003	16712936	16650469	ENSG00000047230.14	-	protein_coding	KNOWN	CTPS2	5	19	0.231495
chrX	16627012	16627085	16627048	ENSG00000265144.1	-	miRNA	KNOWN	MIR548AM	1	1	0.169160
chrX	16650158	16654670	16652414	ENSG00000169906.5	+	protein_coding	KNOWN	S100G	1	3	0.585032
chrX	16719632	16765336	16742484	ENSG00000169895.5	+	protein_coding	KNOWN	SYAP1	2	9	0.404184
chrX	16767844	16767905	16767874	ENSG00000238709.1	+	snRNA	KNOWN	RNU7-56P	1	1	0.498312
chrX	16786427	16844519	16815473	ENSG00000086712.12	+	protein_coding	KNOWN	TXLNG	3	10	0.332793
chrX	16803233	16803353	16803293	ENSG00000230180.1	+	processed_pseudogene	KNOWN	RPL12P49	1	1	0.269530
chrX	16839283	16870414	16854848	ENSG00000102054.17	-	protein_coding	KNOWN	RBBP7	12	12	0.328172
chrX	16875146	16875267	16875206	ENSG00000222736.1	-	snRNA	KNOWN	RNU4-6P	1	1	0.242234
chrX	16897651	16898521	16898086	ENSG00000223498.1	-	processed_pseudogene	KNOWN	RP11-716A19.3	1	1	-0.205394
chrX	16912215	16912317	16912266	ENSG00000199410.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.391552
chrX	16946691	17153280	17049985	ENSG00000169891.17	+	protein_coding	KNOWN	REPS2	5	18	-0.251067
chrX	17044380	17044511	17044445	ENSG00000201467.1	-	snoRNA	NOVEL	SNORA16	1	1	-0.011102
chrX	17099782	17100239	17100010	ENSG00000214322.3	-	processed_pseudogene	KNOWN	CBX1P2	1	1	-0.212863
chrX	17282637	17283093	17282865	ENSG00000214321.3	+	processed_pseudogene	KNOWN	CBX1P4	1	1	-0.521826
chrX	17357930	17358033	17357981	ENSG00000238764.1	+	snoRNA	NOVEL	snoU13	1	1	-0.474112
chrX	17375420	17735994	17555707	ENSG00000188158.14	+	protein_coding	KNOWN	NHS	5	9	0.126848
chrX	17425881	17425954	17425917	ENSG00000265465.1	+	miRNA	KNOWN	MIR4768	1	1	-0.323046
chrX	17528435	17587160	17557797	ENSG00000235834.1	+	sense_intronic	KNOWN	RP1-60N8.1	1	2	-0.007969
chrX	17552349	17557387	17554868	ENSG00000230020.1	-	antisense	KNOWN	NHS-AS1	1	2	-0.337692
chrX	17705339	17705691	17705515	ENSG00000226153.1	-	processed_pseudogene	KNOWN	RP3-389A20.5	1	1	-0.109642
chrX	17737449	17754988	17746218	ENSG00000047634.14	+	protein_coding	KNOWN	SCML1	7	8	0.158954
chrX	17769005	17769398	17769201	ENSG00000227873.1	-	processed_pseudogene	KNOWN	RP3-389A20.2	1	1	-0.334273
chrX	17800049	17861337	17830693	ENSG00000131831.17	-	protein_coding	KNOWN	RAI2	6	3	-0.068207
chrX	17897711	17900333	17899022	ENSG00000276467.1	-	unprocessed_pseudogene	KNOWN	RP1-272E8.2	1	1	-0.307278
chrX	17933349	17934823	17934086	ENSG00000225066.1	+	processed_pseudogene	KNOWN	RP1-272E8.1	1	1	-0.382689
chrX	17970197	18104644	18037420	ENSG00000225882.1	-	lincRNA	KNOWN	LINC01456	1	5	-0.325580
chrX	18162931	18220883	18191907	ENSG00000177324.13	-	protein_coding	KNOWN	BEND2	2	14	-0.201769
chrX	18239314	18354727	18297020	ENSG00000102098.17	-	protein_coding	KNOWN	SCML2	4	15	-0.187024
chrX	18341216	18341346	18341281	ENSG00000235211.4	+	processed_pseudogene	KNOWN	TMSB10P2	1	1	-0.649274
chrX	18395994	18396095	18396044	ENSG00000207025.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.338643
chrX	18425583	18653629	18539606	ENSG00000008086.10	+	protein_coding	KNOWN	CDKL5	8	22	-0.125817
chrX	18535079	18536120	18535599	ENSG00000236187.1	+	processed_pseudogene	KNOWN	GJA6P	1	1	-0.190408
chrX	18639910	18672109	18656009	ENSG00000102104.8	-	protein_coding	KNOWN	RS1	2	6	0.210217
chrX	18675909	18827921	18751915	ENSG00000086717.18	+	protein_coding	KNOWN	PPEF1	9	19	-0.097333
chrX	18688643	18691604	18690123	ENSG00000237221.1	-	antisense	KNOWN	PPEF1-AS1	1	2	0.288634
chrX	18838709	18839452	18839080	ENSG00000196564.4	-	processed_pseudogene	KNOWN	RP3-499B10.3	1	1	-0.275217
chrX	18863564	18863708	18863636	ENSG00000223018.1	-	miRNA	NOVEL	AL096700.1	1	1	-0.381939
chrX	18865771	18866554	18866162	ENSG00000224224.1	+	processed_pseudogene	KNOWN	HAUS1P2	1	1	-0.381939
chrX	18890296	18894497	18892396	ENSG00000237836.5	+	antisense	KNOWN	PHKA2-AS1	2	3	0.497984
chrX	18892300	18984598	18938449	ENSG00000044446.11	-	protein_coding	KNOWN	PHKA2	8	33	0.212466
chrX	18915243	18915535	18915389	ENSG00000266710.2	-	misc_RNA	KNOWN	RN7SL48P	1	1	-0.044070
chrX	18989309	19122637	19055973	ENSG00000173698.17	-	protein_coding	KNOWN	ADGRG2	11	29	0.113203
chrX	19343893	19361705	19352799	ENSG00000131828.13	+	protein_coding	KNOWN	PDHA1	13	12	0.312547
chrX	19360056	19515261	19437658	ENSG00000180815.14	-	protein_coding	KNOWN	MAP3K15	4	30	0.065936
chrX	19376774	19376875	19376824	ENSG00000202144.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.239334
chrX	19496378	19497721	19497049	ENSG00000275800.1	-	unprocessed_pseudogene	KNOWN	EIF5P2	1	2	-0.377493
chrX	19533975	19887601	19710788	ENSG00000147010.17	-	protein_coding	KNOWN	SH3KBP1	9	18	0.324982
chrX	19868637	19868700	19868668	ENSG00000276515.1	-	miRNA	NOVEL	AL732325.1	1	1	0.839605
chrX	19912860	19970298	19941579	ENSG00000173681.16	-	protein_coding	KNOWN	CXorf23	8	11	0.105310
chrX	19985058	19985159	19985108	ENSG00000206663.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.499728
chrX	20006713	20116917	20061815	ENSG00000184368.15	-	protein_coding	KNOWN	MAP7D2	5	17	0.207408
chrX	20017081	20017191	20017136	ENSG00000264566.2	-	miRNA	KNOWN	MIR23C	1	1	-0.029570
chrX	20124518	20141844	20133181	ENSG00000173674.10	-	protein_coding	KNOWN	EIF1AX	2	7	0.042015
chrX	20136066	20136135	20136100	ENSG00000201882.1	-	snoRNA	NOVEL	snoU2-30	1	1	0.042523
chrX	20136306	20136385	20136345	ENSG00000201592.1	-	snoRNA	NOVEL	snoU2_19	1	1	0.042523
chrX	20139968	20140444	20140206	ENSG00000225037.1	+	antisense	KNOWN	EIF1AX-AS1	1	2	0.042523
chrX	20149911	20267100	20208505	ENSG00000177189.12	-	protein_coding	KNOWN	RPS6KA3	6	22	-0.018248
chrX	20274433	20274577	20274505	ENSG00000281047.1	+	miRNA	NOVEL	AL807772.1	1	1	0.248111
chrX	20452108	20452431	20452269	ENSG00000252978.1	+	misc_RNA	KNOWN	RN7SKP183	1	1	0.074918
chrX	21214637	21214743	21214690	ENSG00000206716.1	+	snRNA	KNOWN	RNU6-133P	1	1	-0.624215
chrX	21374418	21654695	21514556	ENSG00000149970.14	+	protein_coding	KNOWN	CNKSR2	7	22	-0.647008
chrX	21421822	21422294	21422058	ENSG00000231913.1	-	processed_pseudogene	KNOWN	RARRES2P3	1	1	-0.814899
chrX	21563072	21563169	21563120	ENSG00000273787.1	+	miRNA	NOVEL	AL928874.1	1	1	-0.615827
chrX	21654690	21658330	21656510	ENSG00000185915.5	-	protein_coding	KNOWN	KLHL34	1	1	-0.474355
chrX	21705972	21758163	21732067	ENSG00000091482.5	-	protein_coding	KNOWN	SMPX	2	6	-0.317001
chrX	21839636	21885424	21862530	ENSG00000012174.11	+	protein_coding	KNOWN	MBTPS2	3	11	-0.104527
chrX	21841794	21841961	21841877	ENSG00000275681.1	-	unprocessed_pseudogene	KNOWN	LL0XNC01-138C3.2	1	1	-0.081656
chrX	21855987	21858727	21857357	ENSG00000230797.2	+	protein_coding	KNOWN	YY2	1	1	-0.130401
chrX	21872707	21872808	21872757	ENSG00000206639.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.086345
chrX	21939461	21940160	21939810	ENSG00000271286.1	+	processed_pseudogene	KNOWN	LL0XNC01-39B3.1	1	1	0.125159
chrX	21940573	21994835	21967704	ENSG00000102172.15	+	protein_coding	KNOWN	SMS	4	11	0.301114
chrX	22032441	22251310	22141875	ENSG00000102174.8	+	protein_coding	KNOWN	PHEX	2	22	0.124349
chrX	22162733	22172983	22167858	ENSG00000224204.1	-	antisense	KNOWN	PHEX-AS1	1	5	0.134469
chrX	22173493	22173587	22173540	ENSG00000277896.1	+	miRNA	NOVEL	Y10196.1	1	1	0.196328
chrX	22259797	23293146	22776471	ENSG00000233067.2	-	lincRNA	KNOWN	PTCHD1-AS	2	6	-0.182048
chrX	22272943	22274461	22273702	ENSG00000175809.5	+	protein_coding	KNOWN	ZNF645	1	1	0.279619
chrX	22428132	22494713	22461422	ENSG00000231846.1	+	lincRNA	KNOWN	RP11-494I9.2	1	3	-0.033133
chrX	22435598	22436818	22436208	ENSG00000224396.1	+	processed_pseudogene	KNOWN	METTL15P3	1	1	0.041366
chrX	22527835	22527941	22527888	ENSG00000201095.1	+	snRNA	KNOWN	RNU6-266P	1	1	-0.329472
chrX	22616744	22617143	22616943	ENSG00000231011.1	-	processed_pseudogene	KNOWN	RP11-494I9.1	1	1	-0.270578
chrX	22636992	22637077	22637034	ENSG00000265819.1	+	miRNA	NOVEL	AC092832.1	1	1	-0.185993
chrX	22698457	22768966	22733711	ENSG00000237019.1	+	lincRNA	KNOWN	GS1-433O24.1	1	2	-0.067729
chrX	22761306	22761390	22761348	ENSG00000277735.1	-	miRNA	NOVEL	AC004470.1	1	1	-0.118575
chrX	22999961	23003589	23001775	ENSG00000184735.6	+	protein_coding	KNOWN	DDX53	1	1	-0.161127
chrX	23075758	23076767	23076262	ENSG00000174028.6	+	processed_pseudogene	KNOWN	FAM3C2	1	2	-0.301351
chrX	23120832	23120905	23120868	ENSG00000221786.1	-	miRNA	NOVEL	AC004673.1	1	1	-0.399861
chrX	23198339	23198690	23198514	ENSG00000228610.1	+	processed_pseudogene	KNOWN	PDCL2P1	1	1	-0.290478
chrX	23334015	23404372	23369193	ENSG00000165186.10	+	protein_coding	KNOWN	PTCHD1	3	3	0.071291
chrX	23351013	23351450	23351231	ENSG00000226774.1	+	processed_pseudogene	KNOWN	RP11-654E17.2	1	1	-0.305972
chrX	23553772	23553896	23553834	ENSG00000238623.2	-	miRNA	NOVEL	AC096507.1	1	1	-0.055565
chrX	23664262	23686399	23675330	ENSG00000123131.12	+	protein_coding	KNOWN	PRDX4	5	7	0.251155
chrX	23702253	23766475	23734364	ENSG00000123130.16	-	protein_coding	KNOWN	ACOT9	8	17	0.636949
chrX	23756172	23756281	23756226	ENSG00000263425.1	+	miRNA	NOVEL	AC131011.1	1	1	0.683907
chrX	23772992	23782956	23777974	ENSG00000233785.1	-	antisense	KNOWN	RP13-314C10.5	1	3	0.036850
chrX	23782210	23782310	23782260	ENSG00000202272.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.036850
chrX	23783173	23786226	23784699	ENSG00000130066.16	+	protein_coding	KNOWN	SAT1	9	7	0.036850
chrX	23833353	23907934	23870643	ENSG00000184831.13	-	protein_coding	KNOWN	APOO	9	9	0.175918
chrX	23836742	23837321	23837031	ENSG00000238103.4	-	processed_pseudogene	KNOWN	RPL9P7	1	1	0.017030
chrX	23907801	23939507	23923654	ENSG00000165182.10	+	protein_coding	KNOWN	CXorf58	2	9	0.263371
chrX	23983720	24027186	24005453	ENSG00000174010.9	-	protein_coding	KNOWN	KLHL15	1	4	0.164663
chrX	24054716	24077971	24066343	ENSG00000130741.10	+	protein_coding	KNOWN	EIF2S3	5	12	0.241728
chrX	24133186	24133317	24133251	ENSG00000201407.1	+	snoRNA	NOVEL	SNORA68	1	1	0.371146
chrX	24146225	24149654	24147939	ENSG00000234230.1	-	antisense	KNOWN	ZFX-AS1	1	3	0.371146
chrX	24149173	24216255	24182714	ENSG00000005889.15	+	protein_coding	KNOWN	ZFX	11	11	0.325612
chrX	24286545	24286677	24286611	ENSG00000264184.1	+	miRNA	NOVEL	AC096509.1	1	1	-0.030865
chrX	24310907	24313315	24312111	ENSG00000223611.5	-	processed_pseudogene	KNOWN	SUPT20HL2	1	1	-0.264702
chrX	24348809	24348906	24348857	ENSG00000264746.1	+	miRNA	NOVEL	AC004552.1	1	1	0.137316
chrX	24362761	24365378	24364069	ENSG00000223731.2	+	processed_pseudogene	KNOWN	SUPT20HL1	1	1	-0.225978
chrX	24429573	24429920	24429746	ENSG00000225071.1	-	processed_pseudogene	KNOWN	GS1-184P14.2	1	1	-0.145047
chrX	24465221	24539837	24502529	ENSG00000067992.12	+	protein_coding	KNOWN	PDK3	3	12	-0.058517
chrX	24513450	24513687	24513568	ENSG00000214124.3	+	processed_pseudogene	KNOWN	SNRPEP9	1	1	-0.102824
chrX	24517240	24517340	24517290	ENSG00000281483.1	-	miRNA	NOVEL	AC004656.1	1	1	-0.102824
chrX	24545516	24550466	24547991	ENSG00000260822.1	+	sense_overlapping	KNOWN	GS1-358P8.4	1	1	0.188894
chrX	24558087	24672677	24615382	ENSG00000102230.13	-	protein_coding	KNOWN	PCYT1B	4	9	-0.178362
chrX	24632257	24632601	24632429	ENSG00000226222.3	+	processed_pseudogene	KNOWN	RP11-753E22.3	1	1	0.005577
chrX	24650073	24658237	24654155	ENSG00000236836.1	+	antisense	KNOWN	PCYT1B-AS1	1	2	-0.485775
chrX	24681909	24682634	24682271	ENSG00000236487.2	+	processed_pseudogene	KNOWN	RP11-753E22.2	1	2	-0.066706
chrX	24693919	24996986	24845452	ENSG00000101868.10	+	protein_coding	KNOWN	POLA1	6	38	-0.097677
chrX	24698122	24698191	24698156	ENSG00000264224.1	+	miRNA	NOVEL	AC004655.1	1	1	-0.048871
chrX	24744441	24744570	24744505	ENSG00000251869.1	+	scaRNA	KNOWN	SCARNA23	1	1	-0.007544
chrX	24788392	24789069	24788730	ENSG00000232472.1	-	processed_pseudogene	KNOWN	EEF1B2P3	1	1	-0.385055
chrX	25003694	25015948	25009821	ENSG00000004848.6	-	protein_coding	KNOWN	ARX	1	5	0.075708
chrX	25029545	25030235	25029890	ENSG00000214111.3	+	processed_pseudogene	KNOWN	RP1-258N20.3	1	1	0.325030
chrX	25060649	25060939	25060794	ENSG00000240439.3	-	misc_RNA	KNOWN	RN7SL91P	1	1	-0.155936
chrX	25194381	25195207	25194794	ENSG00000176812.7	-	processed_pseudogene	KNOWN	RP11-629O4.1	1	1	-0.533613
chrX	25206370	25206460	25206415	ENSG00000212075.1	-	miRNA	NOVEL	AC112778.1	1	1	-0.533613
chrX	25229795	25229932	25229863	ENSG00000281895.1	+	miRNA	NOVEL	AC112778.2	1	1	-0.371409
chrX	25591353	25591808	25591580	ENSG00000229310.1	-	processed_pseudogene	KNOWN	RPP40P1	1	1	-0.216130
chrX	25645722	25646327	25646024	ENSG00000228519.3	-	processed_pseudogene	KNOWN	RP11-298C3.2	1	1	0.015030
chrX	25878339	25893544	25885941	ENSG00000233403.1	+	lincRNA	KNOWN	RP11-86A5.1	1	4	-0.404218
chrX	26138343	26140735	26139539	ENSG00000176774.5	+	protein_coding	KNOWN	MAGEB18	1	3	-0.746727
chrX	26147774	26148281	26148027	ENSG00000232446.1	+	unprocessed_pseudogene	KNOWN	RP13-60P5.2	1	1	-0.746727
chrX	26160601	26161824	26161212	ENSG00000232030.3	+	protein_coding	KNOWN	MAGEB6P1	1	1	0.589491
chrX	26170052	26170913	26170482	ENSG00000227511.1	+	unprocessed_pseudogene	KNOWN	GS1-466O4.2	1	1	0.131520
chrX	26192440	26195646	26194043	ENSG00000176746.6	+	protein_coding	KNOWN	MAGEB6	1	2	0.146440
chrX	26200042	26200647	26200344	ENSG00000232644.1	+	unprocessed_pseudogene	KNOWN	GS1-466O4.3	1	1	0.146440
chrX	26216169	26218270	26217219	ENSG00000188408.5	+	protein_coding	KNOWN	MAGEB5	1	2	0.171719
chrX	26223903	26224658	26224280	ENSG00000237171.1	+	unprocessed_pseudogene	KNOWN	GS1-466O4.5	1	1	0.171719
chrX	26345236	26346242	26345739	ENSG00000228464.1	+	processed_pseudogene	KNOWN	RP11-617O8.1	1	2	-0.715363
chrX	26496936	26505603	26501269	ENSG00000231388.1	+	processed_pseudogene	KNOWN	RP11-702C7.2	1	2	-0.119512
chrX	26557675	26558330	26558002	ENSG00000230265.1	+	processed_pseudogene	KNOWN	RP11-702C7.1	1	1	-0.323046
chrX	26558337	26561052	26559694	ENSG00000259849.1	+	lincRNA	KNOWN	VENTXP1	1	1	-0.323046
chrX	26657291	26657507	26657399	ENSG00000236160.1	-	processed_pseudogene	KNOWN	GS1-541M1.2	1	1	-0.536039
chrX	26686026	26687955	26686990	ENSG00000216938.3	+	processed_pseudogene	KNOWN	RPL7P58	1	2	-0.413899
chrX	26748029	26749090	26748559	ENSG00000236683.3	+	processed_pseudogene	KNOWN	HMGA1P1	1	1	-0.430429
chrX	26790142	26790286	26790214	ENSG00000252491.1	+	snRNA	KNOWN	RNU1-142P	1	1	-0.625608
chrX	27042907	27176298	27109602	ENSG00000242021.2	-	lincRNA	KNOWN	RP11-268G12.3	2	6	-0.611264
chrX	27174920	27398997	27286958	ENSG00000228933.7	-	lincRNA	KNOWN	RP11-268G12.1	2	6	-0.468183
chrX	27218131	27218678	27218404	ENSG00000233807.1	-	processed_pseudogene	KNOWN	RP11-268G12.2	1	1	-0.404434
chrX	27222282	27222367	27222324	ENSG00000274880.1	+	miRNA	NOVEL	AC097262.1	1	1	-0.404434
chrX	27252119	27252235	27252177	ENSG00000252486.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.448577
chrX	27427777	27428231	27428004	ENSG00000235642.1	-	processed_pseudogene	KNOWN	PTP4A1P5	1	1	-0.644974
chrX	27460804	27463296	27462050	ENSG00000224960.3	-	processed_pseudogene	KNOWN	PPP4R3CP	1	1	0.248961
chrX	27517771	27517881	27517826	ENSG00000223391.2	-	processed_pseudogene	KNOWN	GS1-309P15.3	1	1	-0.621127
chrX	27517884	27519759	27518821	ENSG00000238247.2	+	processed_pseudogene	KNOWN	GS1-309P15.4	1	2	-0.621127
chrX	27590382	27748821	27669601	ENSG00000189186.10	+	protein_coding	KNOWN	DCAF8L2	6	7	-0.480336
chrX	27743751	27743848	27743799	ENSG00000263522.2	-	miRNA	NOVEL	AC107613.1	1	1	-0.636706
chrX	27807990	27823014	27815502	ENSG00000177689.10	+	protein_coding	KNOWN	MAGEB10	2	3	-0.098811
chrX	27811885	27812902	27812393	ENSG00000229731.1	+	processed_pseudogene	KNOWN	RP11-501H19.2	1	1	-0.002130
chrX	27832175	27833204	27832689	ENSG00000226199.1	+	processed_pseudogene	KNOWN	RP11-12D5.2	1	1	-0.018432
chrX	27847588	27847939	27847763	ENSG00000232834.1	-	processed_pseudogene	KNOWN	RP11-12D5.3	1	1	-0.018432
chrX	27854323	27855353	27854838	ENSG00000228345.2	+	processed_pseudogene	KNOWN	RP11-12D5.4	1	1	-0.090872
chrX	27863893	27864349	27864121	ENSG00000233243.1	+	processed_pseudogene	KNOWN	RP11-12D5.5	1	1	-0.090872
chrX	27893348	27894059	27893703	ENSG00000224589.1	-	processed_pseudogene	KNOWN	RP11-12D5.6	1	1	-0.596064
chrX	27977993	27981355	27979674	ENSG00000226372.2	-	protein_coding	KNOWN	DCAF8L1	1	1	-0.822278
chrX	28376963	28377061	28377012	ENSG00000263509.1	-	miRNA	NOVEL	AC078988.1	1	1	-0.130401
chrX	28495555	28495663	28495609	ENSG00000277569.1	-	miRNA	KNOWN	MIR6134	1	1	-0.225198
chrX	28571532	28586395	28578963	ENSG00000223742.1	-	lincRNA	KNOWN	RP11-149B9.2	1	3	-0.759486
chrX	28587399	29956723	29272061	ENSG00000169306.9	+	protein_coding	KNOWN	IL1RAPL1	2	11	-0.307597
chrX	28659065	28659469	28659267	ENSG00000226436.1	-	processed_pseudogene	KNOWN	RP1-22N22.1	1	1	-0.309107
chrX	28924069	28924138	28924103	ENSG00000201666.1	+	snoRNA	NOVEL	SNORD74	1	1	-0.501383
chrX	28942050	28942568	28942309	ENSG00000237994.1	+	sense_intronic	KNOWN	RP1-146A15.1	1	2	-0.085795
chrX	28982852	28982970	28982911	ENSG00000201356.1	-	rRNA	KNOWN	RNA5SP500	1	1	-0.517218
chrX	29369001	29369845	29369423	ENSG00000227393.1	-	processed_pseudogene	KNOWN	RP6-127F18.2	1	1	-0.193917
chrX	29574278	29574358	29574318	ENSG00000264090.1	+	miRNA	KNOWN	MIR4666B	1	1	-0.340968
chrX	30017160	30017881	30017520	ENSG00000227592.1	-	processed_pseudogene	KNOWN	PIGFP3	1	1	-0.492971
chrX	30209423	30210209	30209816	ENSG00000270794.1	+	processed_pseudogene	KNOWN	GS1-383H3.6	1	1	0.313325
chrX	30215560	30220089	30217824	ENSG00000099399.5	+	protein_coding	KNOWN	MAGEB2	1	2	0.091992
chrX	30230436	30237492	30233964	ENSG00000198798.5	+	protein_coding	KNOWN	MAGEB3	2	5	-0.332893
chrX	30242052	30244193	30243122	ENSG00000120289.11	+	protein_coding	KNOWN	MAGEB4	1	1	-0.332893
chrX	30243730	30252038	30247884	ENSG00000214107.7	+	protein_coding	KNOWN	MAGEB1	3	4	-0.331670
chrX	30290047	30290351	30290199	ENSG00000276940.1	-	unprocessed_pseudogene	KNOWN	PLCE1P1	1	1	-0.026190
chrX	30304206	30309598	30306902	ENSG00000169297.7	-	protein_coding	KNOWN	NR0B1	2	2	-0.026190
chrX	30315085	30315178	30315131	ENSG00000266257.1	-	miRNA	NOVEL	AC005926.1	1	1	-0.168071
chrX	30558824	30577844	30568334	ENSG00000120280.5	-	protein_coding	KNOWN	CXorf21	1	3	-0.212982
chrX	30617454	30617693	30617573	ENSG00000178556.8	+	processed_pseudogene	KNOWN	CKS1BP6	1	1	0.191527
chrX	30630298	30630825	30630561	ENSG00000232368.1	+	processed_pseudogene	KNOWN	FTLP2	1	1	-0.079775
chrX	30653359	30731456	30692407	ENSG00000198814.12	+	protein_coding	KNOWN	GK	12	22	-0.081093
chrX	30671635	30672166	30671900	ENSG00000229331.1	+	sense_intronic	KNOWN	GK-IT1	1	2	-0.158816
chrX	30698207	30721932	30710069	ENSG00000241886.1	+	sense_intronic	KNOWN	RP11-242C19.2	1	2	-0.026480
chrX	30699998	30724174	30712086	ENSG00000243055.1	-	antisense	KNOWN	GK-AS1	1	2	-0.015978
chrX	30821815	30823407	30822611	ENSG00000277876.1	-	unprocessed_pseudogene	KNOWN	RP11-467P22.5	1	2	0.091992
chrX	30827442	30975084	30901263	ENSG00000157625.15	-	protein_coding	KNOWN	TAB3	6	12	-0.223347
chrX	30834623	30835300	30834961	ENSG00000231542.1	+	antisense	KNOWN	TAB3-AS1	1	2	-0.036742
chrX	30854321	30854707	30854514	ENSG00000235512.1	+	antisense	KNOWN	TAB3-AS2	1	2	-0.789364
chrX	31071241	31072053	31071647	ENSG00000132446.6	-	protein_coding	KNOWN	FTHL17	1	1	-0.369588
chrX	31097677	33339441	32218559	ENSG00000198947.15	-	protein_coding	KNOWN	DMD	32	81	-0.341384
chrX	31348192	31348296	31348244	ENSG00000252903.2	+	snRNA	KNOWN	RNU6-894P	1	1	-0.004224
chrX	32102065	32102176	32102120	ENSG00000222922.1	+	rRNA	KNOWN	RNA5SP501	1	1	-0.238157
chrX	32205902	32206738	32206320	ENSG00000236285.1	+	processed_pseudogene	KNOWN	NPM1P8	1	1	-0.301672
chrX	32583656	32583752	32583704	ENSG00000263600.1	-	miRNA	KNOWN	MIR3915	1	1	-0.413244
chrX	32641474	32641559	32641516	ENSG00000221348.1	-	miRNA	KNOWN	MIR548F5	1	1	-0.350952
chrX	32754940	32756400	32755670	ENSG00000236828.1	+	antisense	KNOWN	DMD-AS3	1	2	-0.566971
chrX	33041395	33041721	33041558	ENSG00000226781.1	+	processed_pseudogene	KNOWN	TBCAP1	1	1	-1.023485
chrX	33410944	33412173	33411558	ENSG00000215310.2	+	processed_pseudogene	KNOWN	RP6-60B16.1	1	1	-0.536039
chrX	33726508	33942280	33834394	ENSG00000233928.5	+	lincRNA	KNOWN	RP11-305F18.1	2	3	-0.376956
chrX	34129756	34132314	34131035	ENSG00000185448.10	-	protein_coding	KNOWN	FAM47A	2	2	-0.198682
chrX	34147036	34147586	34147311	ENSG00000185638.9	+	processed_pseudogene	KNOWN	FTH1P14	1	1	-0.127789
chrX	34206725	34415537	34311131	ENSG00000233571.1	-	lincRNA	KNOWN	RP11-545D19.1	1	3	-0.370985
chrX	34387722	34388464	34388093	ENSG00000236072.1	+	processed_pseudogene	KNOWN	RP11-281B1.2	1	1	-0.057755
chrX	34516920	34517358	34517139	ENSG00000271136.1	+	processed_pseudogene	KNOWN	RP11-320J16.1	1	1	-0.053439
chrX	34627064	34657288	34642176	ENSG00000147027.3	-	protein_coding	KNOWN	TMEM47	1	3	-0.075309
chrX	34717440	34717992	34717716	ENSG00000225384.1	-	processed_pseudogene	KNOWN	RP13-643D4.1	1	1	-0.342945
chrX	34768327	34768688	34768507	ENSG00000273704.1	-	unprocessed_pseudogene	KNOWN	RP11-573C10.1	1	1	0.134427
chrX	34942796	34944915	34943855	ENSG00000189132.6	+	protein_coding	KNOWN	FAM47B	1	1	0.599786
chrX	35056331	35056458	35056394	ENSG00000222864.1	-	miRNA	NOVEL	AL596268.1	1	1	0.342800
chrX	35058927	35059974	35059450	ENSG00000229347.1	+	processed_pseudogene	KNOWN	RP11-504E21.1	1	1	0.342800
chrX	35594173	35594273	35594223	ENSG00000252411.1	+	snRNA	KNOWN	RNU6-1087P	1	1	-0.702689
chrX	35626142	35627064	35626603	ENSG00000230227.4	+	processed_pseudogene	KNOWN	SIAH1P1	1	1	-0.683302
chrX	35710911	35711942	35711426	ENSG00000233663.1	+	processed_pseudogene	KNOWN	RP11-497J7.1	1	1	-0.650850
chrX	35741600	35744582	35743091	ENSG00000271088.1	+	processed_pseudogene	KNOWN	RP11-497J7.4	1	1	-0.238654
chrX	35761499	35762479	35761989	ENSG00000233880.1	+	processed_pseudogene	KNOWN	RP11-497J7.2	1	1	-0.062731
chrX	35798342	35803735	35801038	ENSG00000189023.10	+	protein_coding	KNOWN	MAGEB16	5	3	-0.151934
chrX	35864858	35869631	35867244	ENSG00000271519.1	+	processed_pseudogene	KNOWN	RP11-307A17.2	1	1	-0.365481
chrX	35919734	36385319	36152526	ENSG00000165164.12	+	protein_coding	KNOWN	CFAP47	8	64	-0.409627
chrX	36021939	36022045	36021992	ENSG00000206733.1	-	snRNA	KNOWN	RNU6-641P	1	1	-0.492971
chrX	36211096	36211635	36211365	ENSG00000229384.2	+	processed_pseudogene	KNOWN	HMGB1P16	1	1	-0.352793
chrX	36365626	36440292	36402959	ENSG00000226484.2	-	antisense	KNOWN	RP11-87M18.2	1	8	-0.339861
chrX	36374793	36375183	36374988	ENSG00000233921.2	-	processed_pseudogene	KNOWN	RPS15AP40	1	1	-0.414968
chrX	36577396	36577491	36577443	ENSG00000221729.1	+	miRNA	NOVEL	AC233287.1	1	1	-0.683577
chrX	36719918	36720221	36720069	ENSG00000249467.1	+	processed_pseudogene	KNOWN	RP11-492O8.1	1	1	-0.162325
chrX	36794500	36795460	36794980	ENSG00000275314.1	-	unprocessed_pseudogene	KNOWN	RP11-32A1.2	1	2	-0.402773
chrX	36957913	36958139	36958026	ENSG00000235510.1	+	unprocessed_pseudogene	KNOWN	BX842568.1	1	1	-0.340968
chrX	36962196	36963425	36962810	ENSG00000223723.1	-	processed_pseudogene	KNOWN	BX842568.2	1	1	-0.340968
chrX	36985523	36986093	36985808	ENSG00000231069.1	-	unprocessed_pseudogene	KNOWN	BX842568.4	1	1	-0.649940
chrX	37008397	37011666	37010031	ENSG00000198173.4	+	protein_coding	KNOWN	FAM47C	1	1	-0.195658
chrX	37043023	37043571	37043297	ENSG00000243048.3	-	unprocessed_pseudogene	KNOWN	FTH1P18	1	1	-0.340324
chrX	37077851	37078401	37078126	ENSG00000214071.4	-	unprocessed_pseudogene	KNOWN	RP11-31H15.2	1	1	-0.149016
chrX	37291168	37292227	37291697	ENSG00000233810.1	+	processed_pseudogene	KNOWN	MOB1AP2	1	2	-0.293298
chrX	37349275	37457295	37403285	ENSG00000130962.17	+	protein_coding	KNOWN	PRRG1	9	5	0.107530
chrX	37349330	38687674	38018502	ENSG00000250349.3	+	protein_coding	KNOWN	RP5-972B16.2	1	9	-0.099976
chrX	37441523	37442068	37441795	ENSG00000241607.1	+	unprocessed_pseudogene	KNOWN	RP11-357K9.2	1	1	0.027861
chrX	37492021	37492548	37492284	ENSG00000219186.2	+	unprocessed_pseudogene	KNOWN	FTH1P19	1	1	-0.202191
chrX	37505310	37505860	37505585	ENSG00000234355.3	+	unprocessed_pseudogene	KNOWN	FTH1P27	1	1	-0.202191
chrX	37541077	37545262	37543169	ENSG00000174678.9	-	processed_pseudogene	KNOWN	FAM47DP	1	2	-0.204140
chrX	37571569	37684463	37628016	ENSG00000147036.11	+	protein_coding	KNOWN	LANCL3	3	6	-0.231471
chrX	37685759	37732130	37708944	ENSG00000047597.5	+	protein_coding	KNOWN	XK	1	3	0.134411
chrX	37780011	37813461	37796736	ENSG00000165168.7	+	protein_coding	KNOWN	CYBB	2	13	-0.308754
chrX	37836757	37847637	37842197	ENSG00000165169.10	-	protein_coding	KNOWN	DYNLT3	3	6	-0.171043
chrX	37870109	37870215	37870162	ENSG00000206983.1	+	snRNA	KNOWN	RNU6-49P	1	1	0.577419
chrX	37906147	37949405	37927776	ENSG00000259977.1	+	lincRNA	KNOWN	AL121578.2	1	3	-0.254582
chrX	37945884	37946775	37946329	ENSG00000224339.1	+	processed_pseudogene	KNOWN	AL121578.5	1	1	-0.484509
chrX	37990817	37991317	37991067	ENSG00000187516.6	+	protein_coding	KNOWN	HYPM	1	1	-0.054850
chrX	37994344	37994790	37994567	ENSG00000229674.1	+	processed_pseudogene	KNOWN	AL121578.7	1	1	-0.054850
chrX	38006582	38128819	38067700	ENSG00000147041.11	+	protein_coding	KNOWN	SYTL5	2	17	-0.206031
chrX	38023895	38023986	38023940	ENSG00000221466.2	-	miRNA	KNOWN	MIR548AJ2	1	1	-0.281052
chrX	38149336	38220924	38185130	ENSG00000101955.14	-	protein_coding	KNOWN	SRPX	6	10	0.013622
chrX	38221391	38223667	38222529	ENSG00000226679.1	+	antisense	KNOWN	RP13-43E11.1	1	2	0.280437
chrX	38269163	38327564	38298363	ENSG00000156313.12	-	protein_coding	KNOWN	RPGR	10	20	0.123907
chrX	38308112	38308241	38308176	ENSG00000252050.1	-	snoRNA	NOVEL	SNORA31	1	1	-0.144448
chrX	38352545	38421450	38386997	ENSG00000036473.6	+	protein_coding	KNOWN	OTC	2	10	-0.259286
chrX	38395369	38395895	38395632	ENSG00000227988.1	-	processed_pseudogene	KNOWN	TDGF1P1	1	1	-0.492971
chrX	38479215	38479913	38479564	ENSG00000232370.1	+	processed_pseudogene	KNOWN	AF241726.2	1	1	-0.218937
chrX	38484752	38485264	38485008	ENSG00000229735.1	-	processed_pseudogene	KNOWN	FTLP16	1	1	-0.218937
chrX	38531923	38534174	38533048	ENSG00000233007.1	-	processed_pseudogene	KNOWN	UBTFL11	1	1	0.107422
chrX	38561370	38688920	38625145	ENSG00000156298.12	+	protein_coding	KNOWN	TSPAN7	8	10	-0.086300
chrX	38608215	38608276	38608245	ENSG00000238606.1	+	snRNA	KNOWN	RNU7-7P	1	1	-0.121412
chrX	38770331	38799658	38784994	ENSG00000235806.1	+	lincRNA	KNOWN	RP4-646N3.1	1	5	-0.386994
chrX	38801432	38806537	38803984	ENSG00000165175.15	+	protein_coding	KNOWN	MID1IP1	4	3	-0.077933
chrX	38801568	38803883	38802725	ENSG00000238123.1	-	antisense	KNOWN	MID1IP1-AS1	1	2	-0.077933
chrX	39081180	39081285	39081232	ENSG00000207122.1	-	snRNA	KNOWN	RNU6-591P	1	1	0.410674
chrX	39226103	39299786	39262944	ENSG00000224610.1	-	lincRNA	KNOWN	RP11-265P11.1	1	3	-0.095174
chrX	39304956	39327362	39316159	ENSG00000235304.1	-	lincRNA	KNOWN	LINC01281	2	4	-0.137490
chrX	39367285	39391774	39379529	ENSG00000236747.1	-	lincRNA	KNOWN	LINC01282	1	6	-0.246085
chrX	39401252	39434824	39418038	ENSG00000234191.1	-	lincRNA	KNOWN	RP11-157D23.2	1	4	0.070064
chrX	39661216	39661321	39661268	ENSG00000263730.1	+	miRNA	KNOWN	MIR3937	1	1	0.124782
chrX	39704368	39704431	39704399	ENSG00000281059.1	-	miRNA	NOVEL	AF241734.1	1	1	0.147487
chrX	39786524	39786823	39786673	ENSG00000264618.2	-	misc_RNA	KNOWN	RN7SL732P	1	1	0.426859
chrX	39787132	39788136	39787634	ENSG00000228232.1	-	processed_pseudogene	KNOWN	GAPDHP1	1	1	0.426859
chrX	39791580	39791904	39791742	ENSG00000270759.1	-	processed_pseudogene	KNOWN	CTD-2324A24.2	1	1	0.416831
chrX	39837536	39848358	39842947	ENSG00000261435.1	-	lincRNA	KNOWN	RP13-126P21.2	1	2	0.282675
chrX	39837561	39837613	39837587	ENSG00000263972.1	+	miRNA	KNOWN	MIR1587	1	1	0.282675
chrX	39865424	39865888	39865656	ENSG00000214047.4	+	processed_pseudogene	KNOWN	RPS11P7	1	1	0.832605
chrX	39981591	39981677	39981634	ENSG00000275790.1	+	miRNA	NOVEL	AC092198.2	1	1	0.481034
chrX	40009276	40012182	40010729	ENSG00000223486.1	+	lincRNA	KNOWN	AC092198.1	1	2	0.727489
chrX	40049815	40177329	40113572	ENSG00000183337.16	-	protein_coding	KNOWN	BCOR	12	15	0.705517
chrX	40262917	40287720	40275318	ENSG00000236393.1	+	lincRNA	KNOWN	RP11-320G24.1	2	3	0.643252
chrX	40359183	40360726	40359954	ENSG00000214045.3	-	processed_pseudogene	KNOWN	RP6-186E3.1	1	1	-0.143386
chrX	40492844	40492941	40492892	ENSG00000206677.2	+	misc_RNA	NOVEL	Y_RNA	1	1	0.608242
chrX	40514895	40515508	40515201	ENSG00000235685.2	+	processed_pseudogene	KNOWN	RP11-126D17.1	1	2	0.369526
chrX	40535502	40535563	40535532	ENSG00000238730.1	-	snRNA	KNOWN	RNU7-164P	1	1	0.434593
chrX	40580908	40606637	40593772	ENSG00000182220.13	+	protein_coding	KNOWN	ATP6AP2	7	9	0.202305
chrX	40623566	40623860	40623713	ENSG00000238205.2	+	processed_pseudogene	KNOWN	MPC1L	1	1	0.240514
chrX	40626921	40647554	40637237	ENSG00000185753.12	-	protein_coding	KNOWN	CXorf38	3	7	0.089097
chrX	40648306	40735858	40692082	ENSG00000180182.10	-	protein_coding	KNOWN	MED14	9	31	0.118248
chrX	40735400	40738701	40737050	ENSG00000234636.2	+	antisense	KNOWN	MED14OS	1	2	0.175408
chrX	40758483	40759050	40758766	ENSG00000270791.1	+	processed_pseudogene	KNOWN	DPRXP6	1	1	0.428275
chrX	40760104	40761270	40760687	ENSG00000214031.2	-	processed_pseudogene	KNOWN	RP11-169L17.3	1	1	0.428275
chrX	40831844	40832562	40832203	ENSG00000237661.1	-	processed_pseudogene	KNOWN	RP11-169L17.5	1	1	0.494538
chrX	40834485	40836005	40835245	ENSG00000238222.3	+	processed_pseudogene	KNOWN	MKRN4P	1	1	0.494538
chrX	40890647	40891537	40891092	ENSG00000232801.1	-	processed_pseudogene	KNOWN	SDCBPP3	1	1	0.376969
chrX	40907987	40908391	40908189	ENSG00000189145.7	+	processed_pseudogene	KNOWN	RP11-77G22.2	1	1	0.376969
chrX	40934982	40935864	40935423	ENSG00000216866.5	-	processed_pseudogene	KNOWN	RPS2P55	1	1	0.064511
chrX	41076999	41077750	41077374	ENSG00000237931.1	+	processed_pseudogene	KNOWN	CLIC4P3	1	1	0.161033
chrX	41085635	41236579	41161107	ENSG00000124486.12	+	protein_coding	KNOWN	USP9X	8	45	0.259350
chrX	41233633	41234283	41233958	ENSG00000269941.1	+	sense_intronic	KNOWN	RP5-1172N10.4	1	1	0.676954
chrX	41275739	41276778	41276258	ENSG00000223714.1	+	lincRNA	KNOWN	RP5-1172N10.2	1	2	1.013989
chrX	41292798	41292916	41292857	ENSG00000199564.1	+	rRNA	KNOWN	RNA5SP502	1	1	0.531691
chrX	41316488	41316589	41316538	ENSG00000238426.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.703138
chrX	41322601	41323111	41322856	ENSG00000226641.1	-	processed_pseudogene	KNOWN	RP13-13A3.1	1	1	0.703138
chrX	41333348	41364472	41348910	ENSG00000215301.9	+	protein_coding	KNOWN	DDX3X	22	19	0.649715
chrX	41345576	41345876	41345726	ENSG00000264573.2	-	misc_RNA	KNOWN	RN7SL15P	1	1	0.701407
chrX	41447434	41475710	41461572	ENSG00000188937.5	+	protein_coding	KNOWN	NYX	3	3	0.551821
chrX	41472264	41472653	41472458	ENSG00000225238.1	-	processed_pseudogene	KNOWN	RP1-169I5.4	1	1	0.282514
chrX	41514934	41923463	41719198	ENSG00000147044.20	-	protein_coding	KNOWN	CASK	13	27	0.163529
chrX	41520036	41522336	41521186	ENSG00000233033.1	+	antisense	KNOWN	CASK-AS1	1	2	0.744068
chrX	41570923	41571029	41570976	ENSG00000212207.1	-	snRNA	KNOWN	RNU6-1321P	1	1	-0.122747
chrX	41675760	41676494	41676127	ENSG00000217624.2	-	processed_pseudogene	KNOWN	RP11-204C16.4	1	1	0.204886
chrX	41683168	41683462	41683315	ENSG00000242559.3	-	misc_RNA	KNOWN	RN7SL144P	1	1	0.204886
chrX	41688973	41697277	41693125	ENSG00000171659.13	+	protein_coding	KNOWN	GPR34	3	4	0.036064
chrX	41724155	41730135	41727145	ENSG00000171657.5	+	protein_coding	KNOWN	GPR82	2	3	0.171807
chrX	41748222	41748608	41748415	ENSG00000229822.2	+	processed_pseudogene	KNOWN	RP5-1174J21.2	1	1	0.355026
chrX	41790192	41790250	41790221	ENSG00000237875.1	-	processed_pseudogene	KNOWN	RP5-1174J21.1	1	1	0.126757
chrX	41919254	41919349	41919301	ENSG00000251807.1	-	snRNA	KNOWN	RNU6-202P	1	1	-0.193917
chrX	42047883	42054836	42051359	ENSG00000233103.1	-	lincRNA	KNOWN	RP11-524P6.1	1	2	-0.331656
chrX	42098754	42099173	42098963	ENSG00000228847.1	-	processed_pseudogene	KNOWN	ATP5G2P4	1	1	0.159106
chrX	42139425	42139530	42139477	ENSG00000212560.1	-	snRNA	KNOWN	RNU6-630P	1	1	-0.089615
chrX	42150511	42150744	42150627	ENSG00000228780.2	-	processed_pseudogene	KNOWN	RP1-50A13.1	1	1	0.023279
chrX	42174279	42174385	42174332	ENSG00000206896.1	-	snRNA	KNOWN	RNU6-1124P	1	1	-0.158816
chrX	42252459	42699385	42475922	ENSG00000231772.5	+	lincRNA	KNOWN	RP1-154K9.2	2	8	-0.189135
chrX	42285229	42285603	42285416	ENSG00000279849.1	+	protein_coding	KNOWN	AL023875.1	1	1	-0.216130
chrX	42777471	42778079	42777775	ENSG00000102055.5	-	processed_pseudogene	KNOWN	PPP1R2P9	1	1	0.059570
chrX	43000174	43000396	43000285	ENSG00000270280.1	+	processed_pseudogene	KNOWN	RP11-265D20.1	1	1	-0.310767
chrX	43176994	43226598	43201796	ENSG00000224294.1	+	lincRNA	KNOWN	RP3-326I13.1	1	6	-0.245596
chrX	43278125	43279658	43278891	ENSG00000237206.1	-	processed_pseudogene	KNOWN	IMPDH1P4	1	1	-0.086345
chrX	43407665	43408559	43408112	ENSG00000231750.3	-	processed_pseudogene	KNOWN	NANOGP10	1	1	-0.133075
chrX	43654907	43746824	43700865	ENSG00000189221.9	+	protein_coding	KNOWN	MAOA	4	16	-0.208512
chrX	43766611	43882447	43824529	ENSG00000069535.13	-	protein_coding	KNOWN	MAOB	3	15	-0.244967
chrX	43948776	43973504	43961140	ENSG00000124479.8	-	protein_coding	KNOWN	NDP	2	3	-0.139335
chrX	43949732	43969620	43959676	ENSG00000236276.1	+	antisense	KNOWN	NDP-AS1	1	5	-0.210649
chrX	44029332	44030921	44030126	ENSG00000214019.2	+	processed_pseudogene	KNOWN	RP6-218J18.2	1	1	-0.185947
chrX	44147882	44343672	44245777	ENSG00000183690.12	-	protein_coding	KNOWN	EFHC2	2	15	-0.142096
chrX	44283916	44286246	44285081	ENSG00000198414.5	+	processed_pseudogene	KNOWN	TATDN2P1	1	1	-0.473071
chrX	44309314	44310476	44309895	ENSG00000214018.3	-	processed_pseudogene	KNOWN	RRM2P3	1	1	-0.067524
chrX	44401603	44401704	44401653	ENSG00000200702.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.056107
chrX	44466691	44468955	44467823	ENSG00000224054.1	+	processed_pseudogene	KNOWN	RP4-551E13.2	1	4	-0.259994
chrX	44476027	44477422	44476724	ENSG00000215035.2	-	processed_pseudogene	KNOWN	FDPSP5	1	2	-0.219469
chrX	44523639	44543001	44533320	ENSG00000069509.5	-	protein_coding	KNOWN	FUNDC1	2	5	-0.111099
chrX	44577354	44577438	44577396	ENSG00000252120.1	-	miRNA	NOVEL	AL136137.1	1	1	0.360809
chrX	44633692	44635232	44634462	ENSG00000233543.1	+	processed_pseudogene	KNOWN	CHTF8P1	1	1	0.247643
chrX	44649129	44649719	44649424	ENSG00000229168.4	+	processed_pseudogene	KNOWN	RPL19P20	1	1	0.247643
chrX	44741087	44741964	44741525	ENSG00000214016.3	+	processed_pseudogene	KNOWN	RPSAP61	1	1	0.128518
chrX	44772773	44773061	44772917	ENSG00000242065.3	-	misc_RNA	KNOWN	RN7SL291P	1	1	0.127181
chrX	44844004	44844888	44844446	ENSG00000189037.7	+	protein_coding	KNOWN	DUSP21	1	1	-0.103024
chrX	44873177	45112602	44992889	ENSG00000147050.14	+	protein_coding	KNOWN	KDM6A	14	30	0.201143
chrX	44982494	44982556	44982525	ENSG00000281786.1	+	miRNA	NOVEL	AL138744.1	1	1	0.257578
chrX	45148374	45200901	45174637	ENSG00000147113.16	-	protein_coding	KNOWN	CXorf36	4	5	0.345281
chrX	45183251	45333917	45258584	ENSG00000229491.5	+	antisense	KNOWN	RP11-342D14.1	3	6	-0.215270
chrX	45381527	45381995	45381761	ENSG00000237782.3	-	processed_pseudogene	KNOWN	RP1-192P9.1	1	1	0.314384
chrX	45505388	45630202	45567795	ENSG00000229563.6	+	lincRNA	KNOWN	LINC01204	3	5	0.047824
chrX	45632292	45633733	45633012	ENSG00000214282.3	-	processed_pseudogene	KNOWN	KRT8P14	1	1	0.378613
chrX	45730752	45731688	45731220	ENSG00000204915.3	+	processed_pseudogene	KNOWN	RP6-99M1.1	1	1	-0.240584
chrX	45745211	45770274	45757742	ENSG00000270069.1	-	lincRNA	KNOWN	MIR222HG	2	2	0.329957
chrX	45746157	45746266	45746211	ENSG00000207870.1	-	miRNA	KNOWN	MIR221	1	1	-0.240584
chrX	45747015	45747126	45747070	ENSG00000207725.2	-	miRNA	KNOWN	MIR222	1	1	-0.240584
chrX	45764772	45765299	45765035	ENSG00000269902.1	-	lincRNA	KNOWN	RP6-99M1.3	1	1	0.464801
chrX	45848074	45851490	45849782	ENSG00000231566.1	-	lincRNA	KNOWN	RP5-1158E12.3	1	3	0.257738
chrX	45892912	45892979	45892945	ENSG00000212347.2	-	snoRNA	NOVEL	SNORD77	1	1	0.417762
chrX	45913118	45913871	45913494	ENSG00000215286.3	+	processed_pseudogene	KNOWN	RP5-1158E12.2	1	1	0.044686
chrX	45913267	45917040	45915153	ENSG00000234613.1	-	lincRNA	KNOWN	RP5-1158E12.1	1	2	0.044686
chrX	45951762	45952333	45952047	ENSG00000224701.1	-	processed_pseudogene	KNOWN	MED28P4	1	1	-0.405508
chrX	45983365	45984364	45983864	ENSG00000213100.2	+	processed_pseudogene	KNOWN	KRT18P68	1	1	-0.149016
chrX	46058751	46059528	46059139	ENSG00000214009.2	-	processed_pseudogene	KNOWN	PCNAP3	1	1	0.054024
chrX	46073651	46073935	46073793	ENSG00000278838.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.500350
chrX	46288016	46289128	46288572	ENSG00000229145.1	-	processed_pseudogene	KNOWN	ACTBP1	1	1	0.745667
chrX	46325924	46327645	46326784	ENSG00000236751.1	-	lincRNA	KNOWN	LINC01186	1	2	0.075118
chrX	46418450	46420079	46419264	ENSG00000231235.1	-	processed_pseudogene	KNOWN	RP11-75A9.1	1	1	0.363294
chrX	46439709	46440714	46440211	ENSG00000235587.2	-	processed_pseudogene	KNOWN	GAPDHP65	1	1	0.221760
chrX	46446857	46497422	46472139	ENSG00000147121.15	+	protein_coding	KNOWN	KRBOX4	7	7	0.492073
chrX	46454097	46457199	46455648	ENSG00000224072.1	-	processed_pseudogene	KNOWN	RP11-75A9.3	1	4	0.728180
chrX	46497727	46545457	46521592	ENSG00000251192.7	-	protein_coding	KNOWN	ZNF674	7	6	0.507700
chrX	46517766	46517868	46517817	ENSG00000199226.1	+	snRNA	KNOWN	RNU6-50P	1	1	0.340812
chrX	46545493	46548408	46546950	ENSG00000230844.2	+	lincRNA	KNOWN	ZNF674-AS1	2	3	0.528091
chrX	46553522	46553775	46553648	ENSG00000277721.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.277347
chrX	46560928	46562749	46561838	ENSG00000270499.1	-	processed_pseudogene	KNOWN	MKI67P1	1	2	1.277347
chrX	46573784	46598408	46586096	ENSG00000147119.3	+	protein_coding	KNOWN	CHST7	1	2	0.666477
chrX	46599252	46759172	46679212	ENSG00000065923.9	-	protein_coding	KNOWN	SLC9A7	5	17	0.556869
chrX	46646594	46647330	46646962	ENSG00000213997.3	-	processed_pseudogene	KNOWN	PGAM1P7	1	1	1.017991
chrX	46684765	46685707	46685236	ENSG00000226048.1	-	processed_pseudogene	KNOWN	YBX1P8	1	1	0.382893
chrX	46725164	46725818	46725491	ENSG00000215284.2	-	processed_pseudogene	KNOWN	RP11-198M15.1	1	1	0.704969
chrX	46836940	46882358	46859649	ENSG00000102218.5	+	protein_coding	KNOWN	RP2	1	5	0.459164
chrX	46887417	46899703	46893560	ENSG00000204904.7	-	lincRNA	KNOWN	LINC01545	2	4	0.397609
chrX	46912276	47061242	46986759	ENSG00000102221.13	+	protein_coding	KNOWN	JADE3	4	11	0.415501
chrX	47078355	47093314	47085834	ENSG00000130988.12	+	protein_coding	KNOWN	RGN	6	8	0.618723
chrX	47087506	47087612	47087559	ENSG00000206685.1	+	snRNA	KNOWN	RNU6-1189P	1	1	0.665459
chrX	47132671	47132826	47132748	ENSG00000201659.1	+	snRNA	KNOWN	RNU12-2P	1	1	1.023044
chrX	47142216	47145504	47143860	ENSG00000147123.10	-	protein_coding	KNOWN	NDUFB11	2	3	1.023044
chrX	47144869	47186813	47165841	ENSG00000182872.15	+	protein_coding	KNOWN	RBM10	6	24	1.216599
chrX	47156638	47158199	47157418	ENSG00000237351.1	-	processed_pseudogene	KNOWN	CTD-2522E6.4	1	2	1.152533
chrX	47190861	47215128	47202994	ENSG00000130985.16	+	protein_coding	KNOWN	UBA1	9	26	1.319825
chrX	47204921	47205865	47205393	ENSG00000224975.1	+	sense_intronic	KNOWN	INE1	1	1	1.403453
chrX	47217860	47229997	47223928	ENSG00000102225.15	+	protein_coding	KNOWN	CDK16	23	17	1.007779
chrX	47232690	47248328	47240509	ENSG00000102226.9	+	protein_coding	KNOWN	USP11	12	21	1.027141
chrX	47273366	47274390	47273878	ENSG00000237623.1	-	processed_pseudogene	KNOWN	RP11-571E6.1	1	2	0.804189
chrX	47280811	47281063	47280937	ENSG00000266158.2	-	misc_RNA	KNOWN	RN7SL785P	1	1	0.804189
chrX	47297852	47298721	47298286	ENSG00000203402.2	+	lincRNA	KNOWN	RP11-571E6.3	1	2	0.855552
chrX	47370583	47414305	47392444	ENSG00000147117.7	+	protein_coding	KNOWN	ZNF157	1	4	0.735627
chrX	47388649	47388777	47388713	ENSG00000221459.1	+	snoRNA	KNOWN	SNORA11C	1	1	0.694232
chrX	47389961	47392300	47391130	ENSG00000232009.1	-	processed_pseudogene	KNOWN	RP11-571E6.4	1	3	0.842626
chrX	47438736	47439774	47439255	ENSG00000226556.2	-	processed_pseudogene	KNOWN	NPM1P49	1	2	0.664243
chrX	47445879	47482946	47464412	ENSG00000147124.12	-	protein_coding	KNOWN	ZNF41	4	5	0.729437
chrX	47476822	47477152	47476987	ENSG00000277605.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.996414
chrX	47483571	47484823	47484197	ENSG00000196741.5	+	lincRNA	KNOWN	LINC01560	2	1	0.996414
chrX	47512602	47513483	47513042	ENSG00000235636.1	-	processed_pseudogene	KNOWN	NUS1P1	1	1	0.910879
chrX	47561100	47571920	47566510	ENSG00000078061.12	+	protein_coding	KNOWN	ARAF	6	16	0.747374
chrX	47571898	47619853	47595875	ENSG00000008056.12	-	protein_coding	KNOWN	SYN1	2	13	0.868220
chrX	47577263	47577346	47577304	ENSG00000280539.1	-	miRNA	NOVEL	Z84466.1	1	1	1.169068
chrX	47582313	47586789	47584551	ENSG00000102265.11	+	protein_coding	KNOWN	TIMP1	5	6	1.169068
chrX	47587429	47587505	47587467	ENSG00000263858.1	+	miRNA	KNOWN	MIR4769	1	1	1.169068
chrX	47624213	47630305	47627259	ENSG00000126759.12	-	protein_coding	KNOWN	CFP	7	10	0.457917
chrX	47635521	47650604	47643062	ENSG00000126767.17	-	protein_coding	KNOWN	ELK1	4	7	0.881420
chrX	47651798	47659161	47655479	ENSG00000126756.11	-	protein_coding	KNOWN	UXT	5	7	1.074504
chrX	47658833	47660377	47659605	ENSG00000267064.1	+	antisense	KNOWN	UXT-AS1	2	2	1.074504
chrX	47707191	47753456	47730323	ENSG00000187893.10	+	transcribed_unprocessed_pseudogene	KNOWN	CXXC1P1	3	9	0.321818
chrX	47718002	47719099	47718550	ENSG00000224656.1	-	processed_pseudogene	KNOWN	RP1-212G6.4	1	1	0.342315
chrX	47776827	47778697	47777762	ENSG00000229968.1	-	processed_pseudogene	KNOWN	RP3-393P12.1	1	2	0.045198
chrX	47803296	47804789	47804042	ENSG00000188459.4	+	processed_pseudogene	KNOWN	WASF4P	1	1	0.159631
chrX	47835953	47836793	47836373	ENSG00000279988.1	-	protein_coding	KNOWN	AL022578.1	1	1	0.450785
chrX	47836902	48002561	47919731	ENSG00000197779.13	+	protein_coding	KNOWN	ZNF81	5	6	0.266383
chrX	47840963	47841702	47841332	ENSG00000224401.2	-	processed_pseudogene	KNOWN	RPL7P57	1	1	0.450785
chrX	47974851	48003978	47989414	ENSG00000147118.10	-	protein_coding	KNOWN	ZNF182	3	7	0.483071
chrX	47983356	48071658	48027507	ENSG00000221994.10	-	protein_coding	KNOWN	ZNF630	8	12	0.562212
chrX	48004336	48009729	48007032	ENSG00000171489.10	+	protein_coding	KNOWN	SPACA5	2	5	0.759416
chrX	48056310	48066583	48061446	ENSG00000277541.1	+	antisense	KNOWN	ZNF630-AS1	1	2	0.247270
chrX	48107992	48120210	48114101	ENSG00000171483.13	+	transcribed_unprocessed_pseudogene	KNOWN	SSX6	3	6	0.391429
chrX	48130657	48132613	48131635	ENSG00000171478.7	+	protein_coding	KNOWN	SPACA5B	1	4	0.388974
chrX	48135658	48136159	48135908	ENSG00000230241.1	-	processed_pseudogene	KNOWN	RP11-38O23.3	1	3	0.388974
chrX	48153868	48155941	48154904	ENSG00000233139.1	-	processed_pseudogene	KNOWN	RP11-38O23.4	1	3	-0.048489
chrX	48153980	48154074	48154027	ENSG00000201517.1	-	snRNA	KNOWN	RNU6-707P	1	1	-0.048489
chrX	48156367	48166350	48161358	ENSG00000225198.1	+	unprocessed_pseudogene	KNOWN	SSXP3	1	8	-0.048489
chrX	48177731	48178023	48177877	ENSG00000238032.1	-	processed_pseudogene	KNOWN	RP11-38O23.7	1	1	0.180348
chrX	48186220	48277578	48231899	ENSG00000165583.13	-	protein_coding	KNOWN	SSX5	5	9	0.284761
chrX	48197221	48199431	48198326	ENSG00000234780.1	+	processed_pseudogene	KNOWN	RP11-552E4.2	1	4	0.323317
chrX	48206258	48206374	48206316	ENSG00000252856.1	+	rRNA	KNOWN	RNA5SP503	1	1	0.323317
chrX	48212791	48218010	48215400	ENSG00000204368.6	+	processed_pseudogene	KNOWN	RP11-552E4.3	1	4	0.277024
chrX	48228833	48228959	48228896	ENSG00000231568.1	-	processed_pseudogene	KNOWN	RP11-552E4.4	1	1	0.277024
chrX	48244894	48245745	48245319	ENSG00000229662.2	+	processed_pseudogene	KNOWN	RP11-552E4.5	1	2	-0.074658
chrX	48255317	48267444	48261380	ENSG00000126752.7	+	protein_coding	KNOWN	SSX1	1	8	0.626769
chrX	48274904	48275047	48274975	ENSG00000232813.1	-	processed_pseudogene	KNOWN	RP11-344N17.2	1	1	0.301445
chrX	48276704	48277578	48277141	ENSG00000241207.1	-	unprocessed_pseudogene	KNOWN	RP11-344N17.3	1	3	0.301445
chrX	48279423	48281792	48280607	ENSG00000237345.1	+	processed_pseudogene	KNOWN	RP11-344N17.11	1	4	0.301445
chrX	48296816	48306179	48301497	ENSG00000204648.11	-	transcribed_unprocessed_pseudogene	KNOWN	SSX9	2	6	0.519853
chrX	48306769	48309055	48307912	ENSG00000234391.1	+	processed_pseudogene	KNOWN	RP11-344N17.6	1	4	0.519853
chrX	48322349	48326683	48324516	ENSG00000227302.1	+	unprocessed_pseudogene	KNOWN	SSXP9	1	3	0.420046
chrX	48333675	48334439	48334057	ENSG00000230100.1	-	lincRNA	KNOWN	RP11-344N17.8	1	2	0.392501
chrX	48336899	48337169	48337034	ENSG00000270747.1	-	processed_pseudogene	KNOWN	RP11-344N17.15	1	1	0.392501
chrX	48346428	48356707	48351567	ENSG00000165584.15	-	protein_coding	KNOWN	SSX3	4	8	0.464651
chrX	48357125	48359495	48358310	ENSG00000225055.1	+	processed_pseudogene	KNOWN	RP11-344N17.9	1	3	0.503060
chrX	48371905	48372095	48372000	ENSG00000234448.1	+	processed_pseudogene	KNOWN	RP11-344N17.13	1	1	0.223236
chrX	48383516	48393347	48388431	ENSG00000268009.5	+	protein_coding	KNOWN	SSX4	2	8	0.187085
chrX	48402078	48411910	48406994	ENSG00000269791.5	-	protein_coding	KNOWN	SSX4B	2	8	0.213438
chrX	48412303	48415285	48413794	ENSG00000231603.1	+	processed_pseudogene	KNOWN	RP11-344N17.12	1	4	0.612824
chrX	48423342	48423468	48423405	ENSG00000231489.1	-	processed_pseudogene	KNOWN	AF196972.10	1	1	0.612824
chrX	48433201	48441619	48437410	ENSG00000235350.1	+	unprocessed_pseudogene	KNOWN	AF196972.3	1	3	0.470503
chrX	48446893	48448879	48447886	ENSG00000226971.1	-	processed_pseudogene	KNOWN	AF196972.4	1	3	0.470503
chrX	48458537	48470256	48464396	ENSG00000017483.14	-	protein_coding	KNOWN	SLC38A5	14	17	0.494408
chrX	48476021	48486364	48481192	ENSG00000068438.14	+	protein_coding	KNOWN	FTSJ1	13	14	1.067469
chrX	48506523	48508838	48507680	ENSG00000224292.1	-	antisense	KNOWN	AF196972.9	1	2	1.075690
chrX	48508962	48520814	48514888	ENSG00000102312.20	+	protein_coding	KNOWN	PORCN	15	14	0.681577
chrX	48521158	48528716	48524937	ENSG00000147155.10	+	protein_coding	KNOWN	EBP	6	6	0.643787
chrX	48524480	48524806	48524643	ENSG00000276823.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.643787
chrX	48539457	48562609	48551033	ENSG00000068354.15	+	protein_coding	KNOWN	TBC1D25	5	6	0.810482
chrX	48568014	48574860	48571437	ENSG00000204620.3	-	antisense	KNOWN	RP11-1148L6.9	1	2	0.922074
chrX	48574449	48579066	48576757	ENSG00000102317.17	+	protein_coding	KNOWN	RBM3	11	8	0.917158
chrX	48579774	48581157	48580465	ENSG00000228343.1	-	antisense	KNOWN	RP11-1148L6.5	1	2	0.917158
chrX	48580741	48581165	48580953	ENSG00000279528.1	+	TEC	KNOWN	RP11-1148L6.8	1	1	0.917158
chrX	48583093	48583339	48583216	ENSG00000220125.1	-	processed_pseudogene	KNOWN	MRPL32P1	1	1	0.917158
chrX	48590042	48608867	48599454	ENSG00000101940.17	+	protein_coding	KNOWN	WDR13	12	10	0.801650
chrX	48636165	48637135	48636650	ENSG00000231725.1	+	processed_pseudogene	KNOWN	VN1R110P	1	1	0.260115
chrX	48676596	48691427	48684011	ENSG00000015285.10	+	protein_coding	KNOWN	WAS	7	12	0.599248
chrX	48695554	48709012	48702283	ENSG00000101945.16	+	protein_coding	KNOWN	SUV39H1	4	6	0.763043
chrX	48698963	48737163	48718063	ENSG00000232828.1	-	antisense	KNOWN	AF196970.3	1	3	0.641584
chrX	48724455	48724561	48724508	ENSG00000206723.1	-	snRNA	KNOWN	RNU6-1056P	1	1	0.521500
chrX	48761750	48773648	48767699	ENSG00000171433.11	+	protein_coding	KNOWN	GLOD5	4	4	0.801879
chrX	48775993	48776970	48776481	ENSG00000233585.1	-	processed_pseudogene	KNOWN	AC115617.2	1	1	0.564745
chrX	48776965	48777071	48777018	ENSG00000207367.1	-	snRNA	KNOWN	RNU6-29P	1	1	0.564745
chrX	48786554	48794311	48790432	ENSG00000102145.13	+	protein_coding	KNOWN	GATA1	2	6	0.643323
chrX	48801377	48824982	48813179	ENSG00000094631.18	+	protein_coding	KNOWN	HDAC6	36	29	0.956607
chrX	48828873	48830138	48829505	ENSG00000187682.1	+	protein_coding	KNOWN	ERAS	1	1	1.104559
chrX	48831094	48835633	48833363	ENSG00000102109.8	-	protein_coding	KNOWN	PCSK1N	2	3	1.135319
chrX	48893447	48898143	48895795	ENSG00000126768.12	-	protein_coding	KNOWN	TIMM17B	8	8	0.946141
chrX	48897912	48903143	48900527	ENSG00000102103.15	+	protein_coding	KNOWN	PQBP1	17	7	0.946141
chrX	48903180	48911958	48907569	ENSG00000102100.15	-	protein_coding	KNOWN	SLC35A2	18	5	0.978691
chrX	48913182	48919024	48916103	ENSG00000102096.9	-	protein_coding	KNOWN	PIM2	3	6	1.091992
chrX	48922028	48958386	48940207	ENSG00000068308.13	-	protein_coding	KNOWN	OTUD5	8	11	1.048469
chrX	48939992	48940808	48940400	ENSG00000279155.1	+	TEC	KNOWN	LL0XNC01-36H8.1	1	1	0.987883
chrX	48959179	48959282	48959230	ENSG00000223309.1	-	snRNA	KNOWN	RNU6-722P	1	1	1.151581
chrX	48961378	48971569	48966473	ENSG00000102057.9	-	protein_coding	KNOWN	KCND1	3	6	1.138787
chrX	48973720	49002264	48987992	ENSG00000068400.13	-	protein_coding	KNOWN	GRIPAP1	15	26	1.060747
chrX	49028726	49043486	49036106	ENSG00000068323.16	-	protein_coding	KNOWN	TFE3	5	10	1.167096
chrX	49053572	49069857	49061714	ENSG00000147144.12	+	protein_coding	KNOWN	CCDC120	8	11	0.916625
chrX	49071156	49074071	49072613	ENSG00000243279.3	-	protein_coding	KNOWN	PRAF2	3	3	1.233766
chrX	49071470	49101170	49086320	ENSG00000196998.16	-	protein_coding	KNOWN	WDR45	43	12	1.197669
chrX	49082028	49082165	49082096	ENSG00000206936.1	+	snRNA	KNOWN	RNU4-52P	1	1	1.233766
chrX	49113389	49123801	49118595	ENSG00000068394.10	-	protein_coding	KNOWN	GPKOW	1	11	1.246877
chrX	49152651	49152944	49152797	ENSG00000265033.2	+	misc_RNA	KNOWN	RN7SL262P	1	1	0.810810
chrX	49155242	49157351	49156296	ENSG00000280116.1	-	protein_coding	KNOWN	AC231657.1	1	3	0.810810
chrX	49162564	49168483	49165523	ENSG00000269313.5	+	protein_coding	KNOWN	MAGIX	9	6	0.810810
chrX	49165576	49165972	49165774	ENSG00000279422.1	-	TEC	KNOWN	RP11-641J8.1	1	1	0.810810
chrX	49171926	49175239	49173582	ENSG00000102007.10	+	protein_coding	KNOWN	PLP2	2	5	1.299036
chrX	49175264	49186528	49180896	ENSG00000012211.12	-	protein_coding	KNOWN	PRICKLE3	8	9	1.299036
chrX	49187804	49200259	49194031	ENSG00000102003.10	-	protein_coding	KNOWN	SYP	8	7	1.421859
chrX	49198966	49202454	49200710	ENSG00000237341.1	+	antisense	KNOWN	SYP-AS1	1	2	1.448136
chrX	49205063	49233371	49219217	ENSG00000102001.12	-	protein_coding	KNOWN	CACNA1F	6	48	1.191713
chrX	49233956	49234501	49234228	ENSG00000230216.1	-	processed_pseudogene	KNOWN	HSPB1P2	1	1	1.027452
chrX	49235467	49250526	49242996	ENSG00000101997.12	+	protein_coding	KNOWN	CCDC22	3	17	1.022815
chrX	49250436	49264826	49257631	ENSG00000049768.14	-	protein_coding	KNOWN	FOXP3	6	12	0.894955
chrX	49269843	49301461	49285652	ENSG00000049769.12	+	protein_coding	KNOWN	PPP1R3F	5	5	0.530267
chrX	49273054	49275768	49274411	ENSG00000270012.1	+	lincRNA	KNOWN	LL0XNC01-7P3.1	1	1	0.398653
chrX	49303669	49319844	49311756	ENSG00000215274.5	+	protein_coding	KNOWN	GAGE10	1	5	0.570147
chrX	49322057	49329384	49325720	ENSG00000224659.2	+	protein_coding	KNOWN	GAGE12J	1	5	0.451320
chrX	49331616	49338952	49335284	ENSG00000274274.1	+	protein_coding	KNOWN	GAGE13	1	5	0.225017
chrX	49341192	49345922	49343557	ENSG00000275113.1	+	protein_coding	KNOWN	GAGE2E	1	4	0.225017
chrX	49529869	49529985	49529927	ENSG00000236737.1	+	protein_coding	KNOWN	GAGE12B	1	1	0.000000
chrX	49532211	49539538	49535874	ENSG00000237671.3	+	protein_coding	KNOWN	GAGE12C	1	5	-0.022179
chrX	49541767	49549094	49545430	ENSG00000227488.2	+	protein_coding	KNOWN	GAGE12D	1	5	-0.022179
chrX	49551333	49558649	49554991	ENSG00000216649.3	+	protein_coding	KNOWN	GAGE12E	1	5	0.091992
chrX	49560876	49568205	49564540	ENSG00000236362.7	+	protein_coding	KNOWN	GAGE12F	1	5	0.091992
chrX	49570434	49577754	49574094	ENSG00000215269.5	+	protein_coding	KNOWN	GAGE12G	1	5	0.422140
chrX	49579983	49587301	49583642	ENSG00000224902.5	+	protein_coding	KNOWN	GAGE12H	1	5	0.422140
chrX	49589496	49608536	49599016	ENSG00000205777.17	+	protein_coding	KNOWN	GAGE1	4	6	0.406915
chrX	49589529	49596827	49593178	ENSG00000189064.8	+	protein_coding	KNOWN	GAGE2A	1	5	0.407509
chrX	49632500	49633349	49632924	ENSG00000213856.3	-	processed_pseudogene	KNOWN	VDAC1P2	1	1	0.173676
chrX	49664844	49668680	49666762	ENSG00000227391.1	-	processed_pseudogene	KNOWN	SALL1P1	1	1	0.319402
chrX	49687450	49695993	49691721	ENSG00000068985.4	-	protein_coding	KNOWN	PAGE1	1	6	0.196343
chrX	49829260	49833973	49831616	ENSG00000101951.16	+	protein_coding	KNOWN	PAGE4	4	5	0.420320
chrX	49876724	49879241	49877982	ENSG00000234390.4	-	lincRNA	KNOWN	USP27X-AS1	1	2	0.174454
chrX	49879948	49882565	49881256	ENSG00000273820.1	+	protein_coding	KNOWN	USP27X	1	1	0.174454
chrX	49911620	49912362	49911991	ENSG00000220132.1	-	processed_pseudogene	KNOWN	AF238380.8	1	1	0.091992
chrX	49922615	50099235	50010925	ENSG00000171365.15	+	protein_coding	KNOWN	CLCN5	5	15	0.110474
chrX	49945336	49945442	49945389	ENSG00000201341.1	-	snRNA	KNOWN	RNU6-421P	1	1	0.592421
chrX	50003148	50003238	50003193	ENSG00000207758.1	+	miRNA	KNOWN	MIR532	1	1	0.106639
chrX	50003497	50003607	50003552	ENSG00000207768.2	+	miRNA	KNOWN	MIR188	1	1	0.106639
chrX	50006637	50006746	50006691	ENSG00000265152.2	+	miRNA	NOVEL	AC231645.1	1	1	0.106639
chrX	50008431	50008514	50008472	ENSG00000207785.1	+	miRNA	KNOWN	MIR500A	1	1	0.106639
chrX	50008964	50009028	50008996	ENSG00000208015.1	+	miRNA	KNOWN	MIR362	1	1	0.106639
chrX	50009722	50009805	50009763	ENSG00000211538.1	+	miRNA	KNOWN	MIR501	1	1	0.106639
chrX	50010671	50010749	50010710	ENSG00000239057.1	+	miRNA	KNOWN	MIR500B	1	1	0.047138
chrX	50013236	50013345	50013290	ENSG00000207970.2	+	miRNA	KNOWN	MIR660	1	1	0.047138
chrX	50014598	50014683	50014640	ENSG00000272080.1	+	miRNA	KNOWN	MIR502	1	1	0.047138
chrX	50156159	50156371	50156265	ENSG00000181977.3	+	processed_pseudogene	KNOWN	PYY3	1	1	0.022283
chrX	50171197	50171297	50171247	ENSG00000202495.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.102511
chrX	50190768	50201013	50195890	ENSG00000147081.14	-	protein_coding	KNOWN	AKAP4	6	6	0.140901
chrX	50202713	50351910	50277311	ENSG00000147082.17	+	protein_coding	KNOWN	CCNB3	8	13	-0.047761
chrX	50365409	50470738	50418073	ENSG00000274588.1	-	protein_coding	KNOWN	DGKK	1	28	0.025756
chrX	50591647	50814302	50702974	ENSG00000158352.15	-	protein_coding	KNOWN	SHROOM4	5	10	0.058144
chrX	50645112	50645209	50645160	ENSG00000265211.2	+	miRNA	NOVEL	AL121865.1	1	1	0.272564
chrX	50649641	50649740	50649690	ENSG00000222303.1	+	snRNA	KNOWN	RNU6-935P	1	1	0.272564
chrX	50905438	50905866	50905652	ENSG00000226881.5	+	processed_pseudogene	KNOWN	H3F3AP5	1	1	0.125544
chrX	50910784	50916607	50913695	ENSG00000130385.5	+	protein_coding	KNOWN	BMP15	1	2	-0.082038
chrX	50931114	50931548	50931331	ENSG00000238190.1	-	processed_pseudogene	KNOWN	HMGB1P15	1	1	-0.029024
chrX	51030422	51031357	51030889	ENSG00000227493.1	-	unprocessed_pseudogene	KNOWN	RP11-104D21.1	1	1	0.222576
chrX	51082818	51091228	51087023	ENSG00000230926.1	+	unprocessed_pseudogene	KNOWN	RP11-104D21.2	1	5	-0.075721
chrX	51095844	51171400	51133622	ENSG00000230317.1	-	lincRNA	KNOWN	LINC01284	1	9	-0.081745
chrX	51162864	51163677	51163270	ENSG00000237926.1	+	unprocessed_pseudogene	KNOWN	RP13-346H10.2	1	1	-0.093223
chrX	51332231	51337525	51334878	ENSG00000122824.10	+	protein_coding	KNOWN	NUDT10	2	3	0.346806
chrX	51356944	51396462	51376703	ENSG00000229151.1	-	antisense	KNOWN	RP11-348F1.3	1	2	0.180423
chrX	51396511	51465661	51431086	ENSG00000226530.1	+	lincRNA	KNOWN	RP11-348F1.2	2	2	0.028024
chrX	51406915	51408843	51407879	ENSG00000187690.3	+	protein_coding	KNOWN	CXorf67	1	1	-0.138621
chrX	51490011	51496596	51493303	ENSG00000196368.4	-	protein_coding	KNOWN	NUDT11	1	2	0.407194
chrX	51502090	51511005	51506547	ENSG00000234766.1	-	lincRNA	KNOWN	LINC01496	1	4	0.396721
chrX	51618055	51618918	51618486	ENSG00000224109.2	-	protein_coding	KNOWN	CENPVP3	1	1	-0.029999
chrX	51681212	51682831	51682021	ENSG00000283093.1	-	protein_coding	KNOWN	RP11-141O19.1	1	1	-0.100653
chrX	51710512	51712131	51711321	ENSG00000223591.5	+	protein_coding	KNOWN	CENPVP1	1	1	0.105931
chrX	51743431	51746232	51744831	ENSG00000189369.8	+	protein_coding	KNOWN	GSPT2	1	1	0.206324
chrX	51803007	51902357	51852682	ENSG00000179222.17	+	protein_coding	KNOWN	MAGED1	10	14	0.267127
chrX	51856968	51858066	51857517	ENSG00000236576.1	+	processed_pseudogene	KNOWN	RP11-22B10.3	1	1	-0.009546
chrX	51870706	51870809	51870757	ENSG00000252377.1	-	snRNA	KNOWN	RNU6-504P	1	1	0.355026
chrX	51903338	51903850	51903594	ENSG00000228827.1	-	unprocessed_pseudogene	KNOWN	RP11-234P3.2	1	2	0.869599
chrX	51921864	51922499	51922181	ENSG00000232951.1	-	processed_pseudogene	KNOWN	IPO7P1	1	1	0.495714
chrX	51923552	51923740	51923646	ENSG00000237528.1	+	processed_pseudogene	KNOWN	RP11-234P3.4	1	1	0.495714
chrX	51979223	51980012	51979617	ENSG00000232562.1	-	processed_pseudogene	KNOWN	TPMTP3	1	2	0.378296
chrX	52050860	52054255	52052557	ENSG00000182776.4	-	lincRNA	KNOWN	RP11-114H20.1	1	2	0.272564
chrX	52053176	52055684	52054430	ENSG00000279750.3	+	lincRNA	KNOWN	RP11-33H15.1	2	4	0.272564
chrX	52061827	52069248	52065537	ENSG00000187243.16	-	protein_coding	KNOWN	MAGED4B	12	14	0.272564
chrX	52063347	52063474	52063410	ENSG00000221705.1	-	snoRNA	KNOWN	SNORA11E	1	1	0.272564
chrX	52184823	52192268	52188545	ENSG00000154545.16	+	protein_coding	KNOWN	MAGED4	11	14	0.147012
chrX	52190621	52190748	52190684	ENSG00000221475.1	+	snoRNA	KNOWN	SNORA11D	1	1	0.448557
chrX	52199840	52203235	52201537	ENSG00000179028.4	+	lincRNA	KNOWN	RP11-363G10.2	1	2	0.448557
chrX	52265772	52265860	52265816	ENSG00000274479.1	+	miRNA	NOVEL	AC231759.1	1	1	-0.410509
chrX	52288107	52288192	52288149	ENSG00000278506.1	+	miRNA	NOVEL	AC231759.2	1	1	0.061935
chrX	52326166	52326762	52326464	ENSG00000276474.1	+	processed_pseudogene	KNOWN	RP11-363G10.3	1	1	0.004529
chrX	52336557	52336642	52336599	ENSG00000275335.1	-	miRNA	KNOWN	MIR8088	1	1	-0.011102
chrX	52369030	52375680	52372355	ENSG00000155622.6	+	protein_coding	KNOWN	XAGE2	1	5	0.318726
chrX	52382053	52385614	52383833	ENSG00000225957.1	+	unprocessed_pseudogene	KNOWN	CTD-2267G17.2	1	3	0.314384
chrX	52409772	52410432	52410102	ENSG00000276897.1	-	unprocessed_pseudogene	KNOWN	RP11-651H2.1	1	2	0.129954
chrX	52422069	52459066	52440567	ENSG00000224556.2	+	unprocessed_pseudogene	KNOWN	RP11-485B17.3	1	2	-0.008695
chrX	52448587	52451138	52449862	ENSG00000250084.1	-	unprocessed_pseudogene	KNOWN	RP11-485B17.5	1	3	-0.001366
chrX	52480836	52481131	52480983	ENSG00000278358.1	+	processed_pseudogene	KNOWN	RP11-485B17.9	1	1	0.310632
chrX	52481515	52483950	52482732	ENSG00000278160.1	+	unprocessed_pseudogene	KNOWN	RP11-485B17.10	1	4	0.310632
chrX	52485046	52485912	52485479	ENSG00000275643.1	-	processed_pseudogene	KNOWN	RBM22P6	1	1	0.310632
chrX	52495676	52500812	52498244	ENSG00000204379.10	+	protein_coding	KNOWN	XAGE1A	4	4	0.234345
chrX	52509903	52510182	52510042	ENSG00000223395.2	+	processed_pseudogene	KNOWN	RBM22P7	1	1	0.112077
chrX	52512077	52520803	52516440	ENSG00000204382.11	-	protein_coding	KNOWN	XAGE1B	6	4	0.047937
chrX	52531709	52532051	52531880	ENSG00000277289.1	-	processed_pseudogene	KNOWN	RP11-485B17.12	1	1	0.299317
chrX	52545151	52547695	52546423	ENSG00000227058.1	+	unprocessed_pseudogene	KNOWN	RP13-34L8.7	1	3	0.299317
chrX	52561769	52562301	52562035	ENSG00000231593.1	-	unprocessed_pseudogene	KNOWN	RP13-34L8.8	1	2	-0.118226
chrX	52583989	52586312	52585150	ENSG00000228771.1	+	unprocessed_pseudogene	KNOWN	RP11-552J9.1	1	3	0.422816
chrX	52598494	52603289	52600891	ENSG00000185319.5	+	unprocessed_pseudogene	KNOWN	SSXP4	1	3	0.008736
chrX	52606535	52611758	52609146	ENSG00000197185.7	-	unprocessed_pseudogene	KNOWN	SSXP1	1	5	-0.042728
chrX	52612656	52613523	52613089	ENSG00000234792.1	+	processed_pseudogene	KNOWN	RP11-552J9.6	1	2	-0.144076
chrX	52624998	52632895	52628946	ENSG00000157965.11	+	unprocessed_pseudogene	KNOWN	SSX8	1	6	0.112802
chrX	52644090	52654900	52649495	ENSG00000187754.8	-	protein_coding	KNOWN	SSX7	1	8	0.371499
chrX	52644567	52707189	52675878	ENSG00000241476.7	-	protein_coding	KNOWN	SSX2	4	9	0.183279
chrX	52655207	52657254	52656230	ENSG00000228354.1	+	processed_pseudogene	KNOWN	RP11-552J9.9	1	3	0.148575
chrX	52665231	52665347	52665289	ENSG00000222608.1	+	rRNA	KNOWN	RNA5SP504	1	1	0.148575
chrX	52672718	52677051	52674884	ENSG00000225508.1	+	unprocessed_pseudogene	KNOWN	SSXP5	1	3	0.029528
chrX	52687363	52687633	52687498	ENSG00000237275.1	-	processed_pseudogene	KNOWN	RP11-552J9.11	1	1	0.029528
chrX	52707602	52709933	52708767	ENSG00000223958.1	+	processed_pseudogene	KNOWN	RP11-552J9.12	1	3	0.284637
chrX	52722338	52722524	52722431	ENSG00000225397.1	+	processed_pseudogene	KNOWN	RP11-552J9.13	1	1	0.154053
chrX	52735901	52736107	52736004	ENSG00000229826.2	-	processed_pseudogene	KNOWN	RP11-552J9.14	1	1	0.049347
chrX	52751132	52790305	52770718	ENSG00000268447.5	+	protein_coding	KNOWN	SSX2B	4	9	0.307973
chrX	52770809	52771080	52770944	ENSG00000269281.2	+	processed_pseudogene	KNOWN	RP11-564H18.1	1	1	0.481938
chrX	52781452	52785786	52783619	ENSG00000226867.1	-	unprocessed_pseudogene	KNOWN	RP13-77O11.8	1	3	0.481938
chrX	52796144	52798101	52797122	ENSG00000204363.4	-	protein_coding	KNOWN	SPANXN5	1	2	0.361752
chrX	52801400	52801529	52801464	ENSG00000229885.1	-	processed_pseudogene	KNOWN	RP13-77O11.12	1	1	0.361752
chrX	52812204	52818301	52815252	ENSG00000171405.12	+	protein_coding	KNOWN	XAGE5	4	5	-0.019040
chrX	52824269	52829267	52826768	ENSG00000196395.7	-	unprocessed_pseudogene	KNOWN	RP13-77O11.11	1	3	-0.019040
chrX	52832704	52833899	52833301	ENSG00000224781.1	-	processed_pseudogene	KNOWN	EIF4A2P4	1	1	0.134220
chrX	52862525	52868068	52865296	ENSG00000171402.14	-	protein_coding	KNOWN	XAGE3	2	5	0.393648
chrX	52891306	52908560	52899933	ENSG00000179304.16	+	protein_coding	KNOWN	FAM156B	8	4	0.638274
chrX	52926402	52995472	52960937	ENSG00000268350.7	-	protein_coding	KNOWN	FAM156A	23	5	0.857280
chrX	53001527	53001617	53001572	ENSG00000278536.1	+	miRNA	NOVEL	AC234031.1	1	1	0.566530
chrX	53049091	53080615	53064853	ENSG00000184194.5	+	protein_coding	KNOWN	GPR173	2	3	0.718832
chrX	53065053	53065548	53065300	ENSG00000270497.1	-	processed_pseudogene	KNOWN	RP1-290F12.3	1	1	0.697713
chrX	53082367	53088540	53085453	ENSG00000184205.14	+	protein_coding	KNOWN	TSPYL2	6	7	0.783870
chrX	53093710	53094858	53094284	ENSG00000234019.1	-	lincRNA	KNOWN	RP11-236P24.3	1	2	1.048403
chrX	53094145	53167014	53130579	ENSG00000232593.6	+	lincRNA	KNOWN	KANTR	5	4	0.787130
chrX	53113018	53113274	53113146	ENSG00000235224.1	-	processed_pseudogene	KNOWN	RP11-236P24.1	1	1	0.735199
chrX	53142832	53143913	53143372	ENSG00000231340.1	-	processed_pseudogene	KNOWN	ACTG1P10	1	1	0.754957
chrX	53143034	53143117	53143075	ENSG00000266700.1	-	miRNA	NOVEL	AL139396.1	1	1	0.754957
chrX	53164391	53164557	53164474	ENSG00000227329.2	-	processed_pseudogene	KNOWN	RP11-258C19.4	1	1	0.642544
chrX	53169097	53170914	53170005	ENSG00000270189.1	+	lincRNA	KNOWN	RP11-258C19.7	1	1	0.613360
chrX	53191321	53225422	53208371	ENSG00000126012.11	-	protein_coding	KNOWN	KDM5C	15	26	0.841802
chrX	53195411	53195488	53195449	ENSG00000276575.1	-	miRNA	KNOWN	MIR6895	1	1	0.899347
chrX	53198889	53198945	53198917	ENSG00000277474.1	-	miRNA	KNOWN	MIR6894	1	1	0.899347
chrX	53212408	53214679	53213543	ENSG00000235262.1	-	sense_intronic	KNOWN	KDM5C-IT1	1	2	0.772112
chrX	53232876	53321324	53277100	ENSG00000124313.12	-	protein_coding	KNOWN	IQSEC2	5	15	1.030336
chrX	53322990	53323822	53323406	ENSG00000226299.2	+	processed_pseudogene	KNOWN	RPSAP62	1	1	0.865716
chrX	53324562	53324674	53324618	ENSG00000207408.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.865716
chrX	53337783	53337973	53337878	ENSG00000236571.1	-	processed_pseudogene	KNOWN	RP6-29D12.3	1	2	0.552721
chrX	53340986	53341505	53341245	ENSG00000234413.1	+	processed_pseudogene	KNOWN	RP6-29D12.2	1	1	0.552721
chrX	53374149	53422728	53398438	ENSG00000072501.17	-	protein_coding	KNOWN	SMC1A	6	26	0.740429
chrX	53405673	53405765	53405719	ENSG00000278204.1	-	miRNA	KNOWN	MIR6857	1	1	0.568430
chrX	53422690	53431120	53426905	ENSG00000158423.16	+	protein_coding	KNOWN	RIBC1	5	8	0.958519
chrX	53431258	53434373	53432815	ENSG00000072506.12	-	protein_coding	KNOWN	HSD17B10	5	6	0.841184
chrX	53432722	53433032	53432877	ENSG00000233250.1	-	antisense	KNOWN	RP3-339A18.6	1	2	0.841184
chrX	53456273	53457029	53456651	ENSG00000235416.1	-	processed_pseudogene	KNOWN	RP3-339A18.3	1	1	0.687150
chrX	53462209	53462310	53462259	ENSG00000199422.1	+	misc_RNA	KNOWN	VTRNA3-1P	1	1	0.687150
chrX	53532096	53686729	53609412	ENSG00000086758.15	-	protein_coding	KNOWN	HUWE1	15	84	0.553612
chrX	53556223	53556341	53556282	ENSG00000271886.1	-	miRNA	KNOWN	MIR98	1	1	0.832024
chrX	53557192	53557274	53557233	ENSG00000208012.1	-	miRNA	KNOWN	MIRLET7F2	1	1	0.832024
chrX	53759026	53759204	53759115	ENSG00000224735.1	+	processed_pseudogene	KNOWN	RP11-272G22.1	1	1	0.502080
chrX	53768986	53769219	53769102	ENSG00000226110.2	-	processed_pseudogene	KNOWN	RP11-272G22.2	1	1	0.502080
chrX	53807776	53808623	53808199	ENSG00000229037.2	+	processed_pseudogene	KNOWN	RP11-272G22.3	1	2	0.269530
chrX	53825887	53826309	53826098	ENSG00000235916.1	+	processed_pseudogene	KNOWN	RP13-444K19.1	1	1	0.780048
chrX	53909054	53909161	53909107	ENSG00000201618.1	+	rRNA	KNOWN	RNA5SP505	1	1	0.078695
chrX	53936676	54048958	53992817	ENSG00000172943.18	-	protein_coding	KNOWN	PHF8	19	22	0.549178
chrX	54028845	54028922	54028883	ENSG00000280659.1	+	miRNA	NOVEL	AL732374.1	1	1	0.474712
chrX	54068324	54183281	54125802	ENSG00000184083.11	-	protein_coding	KNOWN	FAM120C	4	16	0.334626
chrX	54147372	54147659	54147515	ENSG00000224949.2	+	processed_pseudogene	KNOWN	RP11-161N3.3	1	1	0.327805
chrX	54192823	54358642	54275732	ENSG00000196632.10	-	protein_coding	KNOWN	WNK3	5	24	0.098242
chrX	54223324	54224062	54223693	ENSG00000234566.1	+	processed_pseudogene	KNOWN	RPL7AP71	1	1	-0.091720
chrX	54343546	54343652	54343599	ENSG00000207104.1	+	snRNA	KNOWN	RNU6-434P	1	1	0.277858
chrX	54440401	54445487	54442944	ENSG00000158526.7	+	protein_coding	KNOWN	TSR2	1	5	0.729422
chrX	54445454	54496166	54470810	ENSG00000102302.7	-	protein_coding	KNOWN	FGD1	1	18	0.734079
chrX	54530211	54561071	54545641	ENSG00000130119.15	+	protein_coding	KNOWN	GNL3L	3	16	0.946565
chrX	54671985	54672638	54672311	ENSG00000215197.4	+	processed_pseudogene	KNOWN	PGAM4P1	1	1	-0.188116
chrX	54748899	54798240	54773569	ENSG00000102313.8	-	protein_coding	KNOWN	ITIH6	2	13	0.353803
chrX	54807599	54816012	54811805	ENSG00000102316.16	+	protein_coding	KNOWN	MAGED2	13	15	0.618292
chrX	54814370	54814497	54814433	ENSG00000221716.1	+	snoRNA	KNOWN	SNORA11	1	1	0.531103
chrX	54842014	54842134	54842074	ENSG00000275387.1	+	unprocessed_pseudogene	KNOWN	RP6-14C6.3	1	1	0.329491
chrX	54920462	54931431	54925946	ENSG00000067445.20	+	protein_coding	KNOWN	TRO	25	14	-0.161555
chrX	54927305	54927433	54927369	ENSG00000221750.1	+	snoRNA	NOVEL	SNORA11	1	1	-0.258915
chrX	54932961	54998534	54965747	ENSG00000158571.10	-	protein_coding	KNOWN	PFKFB1	4	14	0.233811
chrX	55000357	55009057	55004707	ENSG00000169188.4	+	protein_coding	KNOWN	APEX2	2	6	-0.158816
chrX	55009055	55031064	55020059	ENSG00000158578.18	-	protein_coding	KNOWN	ALAS2	8	11	0.292703
chrX	55044749	55045121	55044935	ENSG00000278283.1	-	unprocessed_pseudogene	KNOWN	RP5-884M20.4	1	1	-0.165806
chrX	55054945	55055838	55055391	ENSG00000234466.1	-	processed_pseudogene	KNOWN	RP11-266I3.1	1	1	0.282814
chrX	55075063	55078909	55076986	ENSG00000238269.8	+	protein_coding	KNOWN	PAGE2B	2	5	0.252456
chrX	55089008	55092842	55090925	ENSG00000234068.6	+	protein_coding	KNOWN	PAGE2	3	5	-0.117475
chrX	55101637	55102026	55101831	ENSG00000278319.1	-	unprocessed_pseudogene	KNOWN	RP11-266I3.8	1	1	-0.246424
chrX	55137930	55142433	55140181	ENSG00000276929.1	+	unprocessed_pseudogene	KNOWN	RP11-266I3.9	1	3	0.352055
chrX	55143102	55161310	55152206	ENSG00000182518.13	-	protein_coding	KNOWN	FAM104B	7	4	0.081071
chrX	55172717	55176026	55174371	ENSG00000186678.7	+	unprocessed_pseudogene	KNOWN	RP11-266I3.7	1	3	0.314384
chrX	55178207	55178737	55178472	ENSG00000229760.1	-	processed_pseudogene	KNOWN	RP11-266I3.5	1	1	0.314384
chrX	55179194	55179999	55179596	ENSG00000231947.1	-	processed_pseudogene	KNOWN	MTND2P24	1	1	0.314384
chrX	55180377	55181277	55180827	ENSG00000238047.1	-	processed_pseudogene	KNOWN	MTND1P30	1	1	0.314384
chrX	55181391	55182920	55182155	ENSG00000256045.2	-	protein_coding	KNOWN	MTRNR2L10	1	1	0.314384
chrX	55220355	55224108	55222231	ENSG00000158639.12	+	protein_coding	KNOWN	PAGE5	3	5	-0.258915
chrX	55258412	55264846	55261629	ENSG00000204279.7	-	protein_coding	KNOWN	PAGE3	2	5	-0.537365
chrX	55279839	55288785	55284312	ENSG00000232765.6	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-382F24.1	2	5	0.124782
chrX	55451475	55451585	55451530	ENSG00000266328.2	+	miRNA	NOVEL	AL590410.1	1	1	-0.094886
chrX	55452105	55453566	55452835	ENSG00000187601.4	+	protein_coding	KNOWN	MAGEH1	1	1	-0.094886
chrX	55484616	55489202	55486909	ENSG00000247746.4	-	protein_coding	KNOWN	USP51	2	2	0.021602
chrX	55520382	55520714	55520548	ENSG00000277516.1	-	unprocessed_pseudogene	KNOWN	RP11-541G7.4	1	1	0.330999
chrX	55582733	55582834	55582783	ENSG00000200635.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.210571
chrX	55599663	55600106	55599884	ENSG00000235136.1	-	processed_pseudogene	KNOWN	RP13-146A14.1	1	1	-0.255932
chrX	55623400	55625325	55624362	ENSG00000189299.6	+	protein_coding	KNOWN	FOXR2	1	1	0.059570
chrX	55633031	55635656	55634343	ENSG00000229594.1	-	unprocessed_pseudogene	KNOWN	RP11-167P23.4	1	3	0.008576
chrX	55654709	55657014	55655861	ENSG00000169164.7	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-167P23.2	2	3	0.245615
chrX	55717739	55758774	55738256	ENSG00000083750.12	+	protein_coding	KNOWN	RRAGB	6	11	0.201299
chrX	55908123	56015173	55961648	ENSG00000227486.1	+	lincRNA	KNOWN	RP13-188A5.1	1	2	-0.125077
chrX	55961208	55962482	55961845	ENSG00000214745.2	+	processed_pseudogene	KNOWN	RP11-54I5.1	1	1	0.126343
chrX	56232421	56287889	56260155	ENSG00000102349.15	+	protein_coding	KNOWN	KLF8	6	7	-0.108010
chrX	56242937	56243409	56243173	ENSG00000234135.2	-	processed_pseudogene	KNOWN	RPL23AP83	1	1	0.273439
chrX	56563639	56567868	56565753	ENSG00000188021.8	+	protein_coding	KNOWN	UBQLN2	1	1	-0.665807
chrX	56618391	56624458	56621424	ENSG00000230105.1	+	lincRNA	KNOWN	RP11-431N15.2	1	2	-0.017237
chrX	56729259	56818380	56773819	ENSG00000204272.11	+	protein_coding	KNOWN	LINC01420	3	3	0.386413
chrX	56737242	56737577	56737409	ENSG00000237748.1	-	processed_pseudogene	KNOWN	UQCRBP1	1	1	0.153392
chrX	56973510	56974796	56974153	ENSG00000224799.1	+	antisense	KNOWN	RP11-445O16.3	1	2	0.375785
chrX	56976370	56995537	56985953	ENSG00000204271.10	-	protein_coding	KNOWN	SPIN3	3	5	0.334377
chrX	57068914	57069685	57069299	ENSG00000237708.1	-	processed_pseudogene	KNOWN	RP11-445O16.2	1	1	-0.063286
chrX	57118551	57121547	57120049	ENSG00000186787.7	-	protein_coding	KNOWN	SPIN2B	6	3	0.014824
chrX	57121662	57127243	57124452	ENSG00000226310.1	+	antisense	KNOWN	RP3-323P24.3	1	2	0.014824
chrX	57134530	57137625	57136077	ENSG00000147059.8	-	protein_coding	KNOWN	SPIN2A	3	3	0.530565
chrX	57229034	57229415	57229224	ENSG00000231765.1	+	processed_pseudogene	KNOWN	PPP1R11P2	1	1	-0.044070
chrX	57286706	57489196	57387951	ENSG00000165591.6	+	protein_coding	KNOWN	FAAH2	3	11	-0.167203
chrX	57392646	57395409	57394027	ENSG00000231831.1	-	processed_pseudogene	KNOWN	MTHFD1P1	1	1	-0.074367
chrX	57591652	57597545	57594598	ENSG00000198455.4	+	protein_coding	KNOWN	ZXDB	1	1	0.409962
chrX	57677067	57680260	57678663	ENSG00000215174.2	-	protein_coding	KNOWN	NLRP2P	1	1	-0.436937
chrX	57766320	57767292	57766806	ENSG00000227427.1	+	processed_pseudogene	KNOWN	RP1-49C23.1	1	1	-0.040112
chrX	57906708	57910820	57908764	ENSG00000198205.6	-	protein_coding	KNOWN	ZXDA	1	1	-0.361352
chrX	57933837	57934803	57934320	ENSG00000228004.1	-	processed_pseudogene	KNOWN	MYCLP2	1	1	0.147487
chrX	57984686	57986133	57985409	ENSG00000235124.1	+	processed_pseudogene	KNOWN	KRT8P17	1	1	-0.229936
chrX	62779250	62780326	62779788	ENSG00000236852.1	+	processed_pseudogene	KNOWN	RP11-3D23.1	1	1	-0.474355
chrX	62842542	62843502	62843022	ENSG00000235170.1	+	processed_pseudogene	KNOWN	MTND1P31	1	1	-0.681237
chrX	62843697	62844306	62844001	ENSG00000228182.1	+	processed_pseudogene	KNOWN	MTND2P25	1	1	-0.681237
chrX	62878811	62884842	62881826	ENSG00000234570.1	-	processed_pseudogene	KNOWN	ZFRP1	1	2	-0.307278
chrX	63087071	63088664	63087867	ENSG00000277499.1	+	processed_pseudogene	KNOWN	RP11-144M17.1	1	1	0.023279
chrX	63299247	63299673	63299460	ENSG00000230823.3	-	processed_pseudogene	KNOWN	CBX1P1	1	1	-0.027590
chrX	63343227	63561071	63452149	ENSG00000235437.7	-	processed_transcript	KNOWN	LINC01278	7	4	-0.114371
chrX	63347228	63351344	63349286	ENSG00000186767.5	-	protein_coding	KNOWN	SPIN4	2	1	-0.336838
chrX	63349646	63352178	63350912	ENSG00000233661.1	+	antisense	KNOWN	SPIN4-AS1	1	2	-0.419035
chrX	63634967	63809274	63722120	ENSG00000131089.13	-	protein_coding	KNOWN	ARHGEF9	19	12	0.193375
chrX	63670196	63671502	63670849	ENSG00000231729.1	-	sense_intronic	KNOWN	ARHGEF9-IT1	1	2	-0.037776
chrX	63766875	63767400	63767137	ENSG00000236813.1	+	processed_pseudogene	KNOWN	BTF3P8	1	1	0.213982
chrX	63786002	63786087	63786044	ENSG00000222532.1	-	miRNA	KNOWN	MIR1468	1	1	0.577419
chrX	64044305	64045058	64044681	ENSG00000232794.1	+	processed_pseudogene	KNOWN	HNRNPDP1	1	1	-0.456629
chrX	64144872	64147052	64145962	ENSG00000226010.1	-	processed_pseudogene	KNOWN	RP11-403E24.1	1	2	-0.367440
chrX	64185117	64205744	64195430	ENSG00000184675.9	-	protein_coding	KNOWN	AMER1	2	3	0.212461
chrX	64210691	64210988	64210839	ENSG00000244006.3	+	misc_RNA	KNOWN	RN7SL799P	1	1	0.454562
chrX	64224196	64230631	64227413	ENSG00000198881.9	-	protein_coding	KNOWN	ASB12	1	3	0.402459
chrX	64268081	64395431	64331756	ENSG00000102043.15	-	protein_coding	KNOWN	MTMR8	4	14	-0.383834
chrX	64305047	64306733	64305890	ENSG00000213754.2	-	processed_pseudogene	KNOWN	RP11-284B18.3	1	2	-0.282404
chrX	64432401	64434145	64433273	ENSG00000230889.2	+	processed_pseudogene	KNOWN	SHC1P1	1	1	-0.381078
chrX	64612632	64613262	64612947	ENSG00000227261.1	-	processed_pseudogene	KNOWN	YWHAZP7	1	1	-0.149016
chrX	64623117	64624573	64623845	ENSG00000226502.2	+	processed_pseudogene	KNOWN	KRT8P27	1	1	-0.149016
chrX	64697878	64698547	64698212	ENSG00000225814.1	-	processed_pseudogene	KNOWN	GRPEL2P2	1	1	-0.150579
chrX	64726748	64727048	64726898	ENSG00000236982.1	-	processed_pseudogene	KNOWN	BLOC1S2P1	1	1	-0.629707
chrX	64915802	65034713	64975257	ENSG00000126970.15	-	protein_coding	KNOWN	ZC4H2	8	5	-0.113364
chrX	65185018	65187265	65186141	ENSG00000237971.1	-	processed_pseudogene	KNOWN	RP11-231N9.1	1	3	-0.031997
chrX	65215237	65215342	65215289	ENSG00000266526.2	+	miRNA	NOVEL	AL445523.1	1	1	-0.060011
chrX	65270913	65273019	65271966	ENSG00000225569.1	+	processed_pseudogene	KNOWN	CCT4P2	1	3	-0.365215
chrX	65327988	65331233	65329610	ENSG00000231857.1	-	processed_pseudogene	KNOWN	MORF4L1P5	1	2	-0.305094
chrX	65356890	65357547	65357218	ENSG00000237963.1	-	processed_pseudogene	KNOWN	RP11-151G12.2	1	1	0.042523
chrX	65366638	65507887	65437262	ENSG00000102053.12	+	protein_coding	KNOWN	ZC3H12B	2	6	-0.117375
chrX	65408084	65408672	65408378	ENSG00000228158.2	+	processed_pseudogene	KNOWN	TLE1P1	1	1	-0.132882
chrX	65469087	65470380	65469733	ENSG00000227534.1	+	processed_pseudogene	KNOWN	RP3-323B6.1	1	2	0.028930
chrX	65512582	65534775	65523678	ENSG00000001497.16	-	protein_coding	KNOWN	LAS1L	5	14	0.635224
chrX	65550898	65552421	65551659	ENSG00000227942.1	-	processed_pseudogene	KNOWN	FRMD8P1	1	1	0.444873
chrX	65588377	65741931	65665154	ENSG00000147065.16	+	protein_coding	KNOWN	MSN	6	13	0.446203
chrX	65772741	65773632	65773186	ENSG00000231809.4	-	processed_pseudogene	KNOWN	NANOGP9	1	1	0.152746
chrX	65786763	65787169	65786966	ENSG00000276689.1	+	processed_pseudogene	KNOWN	RP11-314A15.3	1	1	0.152746
chrX	65794345	65795835	65795090	ENSG00000233833.1	+	processed_pseudogene	KNOWN	ETF1P3	1	2	-0.253144
chrX	65821255	65822249	65821752	ENSG00000230039.1	-	processed_pseudogene	KNOWN	RP11-314A15.2	1	1	-0.171043
chrX	65956289	65957196	65956742	ENSG00000217835.3	-	processed_pseudogene	KNOWN	RP6-159A1.2	1	1	-0.367440
chrX	65999751	66001071	66000411	ENSG00000237311.1	+	antisense	KNOWN	RP6-159A1.3	1	2	-0.138621
chrX	66015461	66020422	66017941	ENSG00000274536.4	+	antisense	KNOWN	RP6-159A1.4	2	3	-0.279977
chrX	66018870	66018979	66018924	ENSG00000207939.1	+	miRNA	KNOWN	MIR223	1	1	-0.279977
chrX	66021738	66040125	66030931	ENSG00000155659.14	-	protein_coding	KNOWN	VSIG4	4	8	-0.166319
chrX	66055587	66056587	66056087	ENSG00000215168.2	-	processed_pseudogene	KNOWN	RP11-30M20.1	1	1	-0.341661
chrX	66074835	66076347	66075591	ENSG00000237294.1	-	processed_pseudogene	KNOWN	EIF4BP9	1	1	0.145763
chrX	66162549	66268867	66215708	ENSG00000089472.16	+	protein_coding	KNOWN	HEPH	9	21	-0.207220
chrX	66360766	66361776	66361271	ENSG00000231356.1	-	processed_pseudogene	KNOWN	RP13-238N7.2	1	1	-0.382917
chrX	66437345	66440668	66439006	ENSG00000226820.2	+	unprocessed_pseudogene	KNOWN	RP11-747I9.1	1	3	0.091992
chrX	66497748	66499424	66498586	ENSG00000235892.1	+	processed_pseudogene	KNOWN	PKMP2	1	1	-0.147474
chrX	66595637	66639298	66617467	ENSG00000131080.14	-	protein_coding	KNOWN	EDA2R	4	7	0.021147
chrX	66676258	66676364	66676311	ENSG00000222667.1	-	snRNA	KNOWN	RNU6-394P	1	1	-0.167652
chrX	67373573	67375520	67374546	ENSG00000226280.2	+	processed_pseudogene	KNOWN	RP6-22P16.1	1	1	0.159106
chrX	67533163	67533987	67533575	ENSG00000233710.1	+	processed_pseudogene	KNOWN	RP4-808O4.2	1	1	-0.060011
chrX	67544032	67730619	67637325	ENSG00000169083.15	+	protein_coding	KNOWN	AR	9	9	0.216133
chrX	67545277	67545422	67545349	ENSG00000280956.1	+	miRNA	NOVEL	AL049564.1	1	1	-0.060011
chrX	67791955	67792895	67792425	ENSG00000234201.1	-	processed_pseudogene	KNOWN	BMI1P1	1	1	0.358272
chrX	68013470	68014901	68014185	ENSG00000260118.1	-	lincRNA	KNOWN	RP6-201G10.2	1	1	0.091992
chrX	68042344	68433913	68238128	ENSG00000079482.12	-	protein_coding	KNOWN	OPHN1	5	25	0.115907
chrX	68070520	68071767	68071143	ENSG00000228328.2	-	processed_pseudogene	KNOWN	RP11-516A11.1	1	1	-0.130401
chrX	68102068	68102132	68102100	ENSG00000252145.1	-	snRNA	KNOWN	RNU6-1225P	1	1	0.226293
chrX	68132868	68133437	68133152	ENSG00000228125.2	+	processed_pseudogene	KNOWN	AKIRIN1P2	1	1	-0.377493
chrX	68361075	68361187	68361131	ENSG00000206646.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.516490
chrX	68474710	68476874	68475792	ENSG00000225925.1	+	processed_pseudogene	KNOWN	RP13-313G19.2	1	3	0.569571
chrX	68498323	68537285	68517804	ENSG00000181704.11	+	protein_coding	KNOWN	YIPF6	7	7	0.298210
chrX	68539443	68539549	68539496	ENSG00000206747.1	-	snRNA	KNOWN	RNU6-245P	1	1	-0.090872
chrX	68600099	68600473	68600286	ENSG00000236735.3	+	processed_pseudogene	KNOWN	RPL31P63	1	1	0.075872
chrX	68645326	68645527	68645426	ENSG00000234463.1	-	processed_pseudogene	KNOWN	COX6CP12	1	1	0.636797
chrX	68647666	68725842	68686754	ENSG00000130052.13	+	protein_coding	KNOWN	STARD8	5	15	0.549810
chrX	68771322	68772578	68771950	ENSG00000232267.1	+	processed_pseudogene	KNOWN	ACTR3P2	1	1	-0.102656
chrX	68783472	68785066	68784269	ENSG00000213740.2	+	processed_pseudogene	KNOWN	SERBP1P1	1	2	-0.102656
chrX	68828997	68842147	68835572	ENSG00000090776.5	+	protein_coding	KNOWN	EFNB1	1	5	0.819299
chrX	69160851	69165793	69163322	ENSG00000181191.11	-	protein_coding	KNOWN	PJA1	7	3	0.641330
chrX	69174124	69174717	69174420	ENSG00000172186.7	+	processed_pseudogene	KNOWN	HMGN1P35	1	1	0.165992
chrX	69179557	69209924	69194740	ENSG00000215162.1	+	lincRNA	KNOWN	LINC00269	1	5	0.259251
chrX	69485343	69485652	69485497	ENSG00000231706.2	-	processed_pseudogene	KNOWN	CYCSP43	1	1	-0.244292
chrX	69504705	69504823	69504764	ENSG00000264604.1	+	miRNA	NOVEL	AL158069.1	1	1	-0.142473
chrX	69505241	69532508	69518874	ENSG00000130054.4	+	protein_coding	KNOWN	FAM155B	1	3	0.184396
chrX	69569669	69570357	69570013	ENSG00000228160.1	-	lincRNA	KNOWN	RP13-57D9.3	1	2	0.098796
chrX	69616067	70039469	69827768	ENSG00000158813.17	+	protein_coding	KNOWN	EDA	13	8	-0.282410
chrX	69672479	69672597	69672538	ENSG00000272351.1	+	rRNA	KNOWN	RNA5SP506	1	1	-0.364073
chrX	69692956	69693155	69693055	ENSG00000212434.2	+	snoRNA	NOVEL	U3	1	1	-0.297050
chrX	69937166	69938017	69937591	ENSG00000233229.1	-	processed_pseudogene	KNOWN	CNOT7P1	1	1	-0.522117
chrX	70022829	70022939	70022884	ENSG00000211991.3	+	miRNA	NOVEL	AL158141.1	1	1	-0.275217
chrX	70040542	70049938	70045240	ENSG00000147160.9	-	protein_coding	KNOWN	AWAT2	3	8	0.410674
chrX	70062491	70064179	70063335	ENSG00000189401.2	+	protein_coding	KNOWN	OTUD6A	1	1	-0.036016
chrX	70120353	70121474	70120913	ENSG00000226579.1	-	processed_pseudogene	KNOWN	MTCYBP31	1	1	0.004529
chrX	70124972	70129071	70127021	ENSG00000235382.1	-	processed_pseudogene	KNOWN	MTND4P31	1	5	0.004529
chrX	70133449	70166324	70149886	ENSG00000089289.15	+	protein_coding	KNOWN	IGBP1	2	7	0.360123
chrX	70148582	70149654	70149118	ENSG00000220925.2	-	antisense	KNOWN	IGBP1-AS2	1	2	0.347249
chrX	70163842	70165206	70164524	ENSG00000203588.3	-	antisense	KNOWN	IGBP1-AS1	1	2	0.373174
chrX	70177483	70205545	70191514	ENSG00000184210.5	+	protein_coding	KNOWN	DGAT2L6	1	7	0.297925
chrX	70222006	70222314	70222160	ENSG00000242657.3	-	misc_RNA	KNOWN	RN7SL581P	1	1	0.207469
chrX	70234655	70240627	70237641	ENSG00000204195.3	+	protein_coding	KNOWN	AWAT1	2	7	0.106491
chrX	70253042	70253162	70253102	ENSG00000200473.1	+	rRNA	KNOWN	RNA5SP507	1	1	0.366167
chrX	70258170	70259764	70258967	ENSG00000186912.6	-	protein_coding	KNOWN	P2RY4	1	1	0.366167
chrX	70268305	70281840	70275072	ENSG00000120500.17	+	protein_coding	KNOWN	ARR3	5	17	0.584341
chrX	70282093	70285002	70283547	ENSG00000147127.8	+	protein_coding	KNOWN	RAB41	3	8	0.615554
chrX	70286595	70290514	70288554	ENSG00000120509.10	-	protein_coding	KNOWN	PDZD11	4	8	0.596325
chrX	70290090	70420832	70355461	ENSG00000090889.11	+	protein_coding	KNOWN	KIF4A	2	31	0.103094
chrX	70361486	70362374	70361930	ENSG00000231053.1	-	processed_pseudogene	KNOWN	RP13-26D14.2	1	2	-0.246424
chrX	70396279	70396375	70396327	ENSG00000201377.1	+	misc_RNA	KNOWN	RNY4P23	1	1	-0.177195
chrX	70408176	70408284	70408230	ENSG00000277312.1	-	miRNA	NOVEL	AL139398.1	1	1	-0.177195
chrX	70423031	70433390	70428210	ENSG00000130055.13	+	protein_coding	KNOWN	GDPD2	5	17	0.381151
chrX	70444861	70505490	70475175	ENSG00000082458.11	+	protein_coding	KNOWN	DLG3	10	21	0.552057
chrX	70450879	70451022	70450950	ENSG00000200431.1	+	snRNA	KNOWN	RNU4-81P	1	1	0.716024
chrX	70452958	70455994	70454476	ENSG00000231651.1	-	antisense	KNOWN	DLG3-AS1	2	2	0.716024
chrX	70528940	70908731	70718835	ENSG00000120498.13	-	protein_coding	KNOWN	TEX11	4	31	-0.029301
chrX	70672895	70673515	70673205	ENSG00000230187.1	-	processed_pseudogene	KNOWN	RP11-291O7.1	1	2	0.270329
chrX	70846079	70846295	70846187	ENSG00000277492.1	-	snoRNA	NOVEL	ACEA_U3	1	1	-0.054229
chrX	70846080	70846295	70846187	ENSG00000280704.1	-	snoRNA	NOVEL	U3	1	1	-0.054229
chrX	70857163	70857502	70857332	ENSG00000213747.2	+	processed_pseudogene	KNOWN	RP13-278H16.2	1	1	-0.305972
chrX	70925582	70931125	70928353	ENSG00000165349.11	-	protein_coding	KNOWN	SLC7A3	2	12	-0.359993
chrX	70962964	70963293	70963128	ENSG00000230629.2	+	processed_pseudogene	KNOWN	RPS23P8	1	1	-0.091872
chrX	71016531	71016905	71016718	ENSG00000229324.1	-	processed_pseudogene	KNOWN	NUTF2P7	1	1	0.166760
chrX	71020275	71020438	71020356	ENSG00000212605.1	-	snRNA	KNOWN	RNU1-56P	1	1	0.166760
chrX	71043214	71045470	71044342	ENSG00000227536.1	-	processed_pseudogene	KNOWN	SOCS5P4	1	3	0.777356
chrX	71056332	71073426	71064879	ENSG00000147164.11	-	protein_coding	KNOWN	SNX12	7	6	0.149454
chrX	71096197	71103535	71099866	ENSG00000184481.16	+	protein_coding	KNOWN	FOXO4	4	4	0.334193
chrX	71103889	71106788	71105338	ENSG00000204165.5	-	protein_coding	KNOWN	CXorf65	4	6	0.334193
chrX	71107404	71112108	71109756	ENSG00000147168.12	-	protein_coding	KNOWN	IL2RG	9	8	0.451982
chrX	71118556	71142454	71130505	ENSG00000184634.15	+	protein_coding	KNOWN	MED12	9	45	0.838590
chrX	71141185	71141306	71141245	ENSG00000265597.1	+	miRNA	NOVEL	AL590764.1	1	1	1.060628
chrX	71144831	71171201	71158016	ENSG00000196338.12	+	protein_coding	KNOWN	NLGN3	6	8	1.229543
chrX	71183559	71198175	71190867	ENSG00000228427.1	-	antisense	KNOWN	RP5-1091N2.9	1	2	0.791143
chrX	71215194	71225516	71220355	ENSG00000169562.9	+	protein_coding	KNOWN	GJB1	4	3	0.723124
chrX	71239624	71255146	71247385	ENSG00000147130.14	-	protein_coding	KNOWN	ZMYM3	9	25	0.811193
chrX	71283192	71301168	71292180	ENSG00000147140.15	+	protein_coding	KNOWN	NONO	15	13	0.905059
chrX	71301734	71305371	71303552	ENSG00000147166.10	+	protein_coding	KNOWN	ITGB1BP2	5	11	0.979517
chrX	71314912	71315879	71315395	ENSG00000224208.1	-	processed_pseudogene	KNOWN	AL590762.6	1	2	0.896596
chrX	71319394	71319658	71319526	ENSG00000281075.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.896596
chrX	71352418	71352988	71352703	ENSG00000213706.2	+	processed_pseudogene	KNOWN	AL590762.7	1	1	0.884396
chrX	71366239	71532374	71449306	ENSG00000147133.15	+	protein_coding	KNOWN	TAF1	20	39	0.687386
chrX	71368666	71368968	71368817	ENSG00000275975.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.884396
chrX	71413834	71414086	71413960	ENSG00000229601.1	-	processed_pseudogene	KNOWN	AL590762.10	1	1	0.297461
chrX	71420083	71420514	71420298	ENSG00000213018.2	-	processed_pseudogene	KNOWN	AL590762.11	1	1	0.297461
chrX	71491066	71491167	71491116	ENSG00000199751.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.822152
chrX	71491682	71492928	71492305	ENSG00000243468.5	-	transcribed_processed_pseudogene	KNOWN	INGX	2	1	0.822152
chrX	71527814	71530225	71529019	ENSG00000215120.2	-	processed_pseudogene	KNOWN	AL590763.5	1	2	0.575794
chrX	71533083	71575897	71554490	ENSG00000147162.13	+	protein_coding	KNOWN	OGT	11	22	0.792177
chrX	71578411	71613583	71595997	ENSG00000147174.11	+	protein_coding	KNOWN	ACRC	3	13	0.553793
chrX	71615916	71618517	71617216	ENSG00000186810.7	-	protein_coding	KNOWN	CXCR3	2	2	0.881313
chrX	71625753	71625855	71625804	ENSG00000264855.1	-	miRNA	NOVEL	AL590763.1	1	1	0.881313
chrX	71632223	71632361	71632292	ENSG00000281405.1	-	miRNA	NOVEL	AL590763.2	1	1	0.710902
chrX	71662995	71665753	71664374	ENSG00000237265.5	-	processed_transcript	KNOWN	RP11-402P6.9	2	6	0.425416
chrX	71691932	71692179	71692055	ENSG00000230934.1	+	processed_pseudogene	KNOWN	RP11-402P6.2	1	1	0.137795
chrX	71697196	71706455	71701825	ENSG00000281852.1	+	lincRNA	KNOWN	LINC00891	1	3	0.137795
chrX	71714371	71718151	71716261	ENSG00000215115.6	-	protein_coding	KNOWN	CXorf49	2	6	0.454562
chrX	71719142	71721278	71720210	ENSG00000226870.2	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-402P6.13	2	4	0.454562
chrX	71736454	71736703	71736578	ENSG00000237182.1	-	processed_pseudogene	KNOWN	RP11-402P6.3	1	1	0.183140
chrX	71744828	71745077	71744952	ENSG00000237717.1	+	processed_pseudogene	KNOWN	RP11-402P6.4	1	1	0.183140
chrX	71760775	71761659	71761217	ENSG00000231774.1	-	lincRNA	KNOWN	RP11-402P6.11	1	3	0.136386
chrX	71761968	71762433	71762200	ENSG00000234442.2	-	unprocessed_pseudogene	KNOWN	RP11-402P6.12	1	1	0.136386
chrX	71763424	71767204	71765314	ENSG00000215113.6	+	protein_coding	KNOWN	CXorf49B	2	6	0.136386
chrX	71789386	71789636	71789511	ENSG00000224617.1	-	processed_pseudogene	KNOWN	RP11-402P6.5	1	1	0.338632
chrX	71848775	71849004	71848889	ENSG00000229030.1	+	processed_pseudogene	KNOWN	RP11-402P6.6	1	1	-0.213634
chrX	71910818	72161750	72036284	ENSG00000204131.8	+	protein_coding	KNOWN	NHSL2	7	8	0.286470
chrX	71965972	71966074	71966023	ENSG00000201392.1	-	snRNA	KNOWN	RNU6-1078P	1	1	0.181259
chrX	72044545	72044892	72044718	ENSG00000196933.5	+	processed_pseudogene	KNOWN	RPS26P11	1	1	0.488509
chrX	72127110	72131901	72129505	ENSG00000242732.4	-	protein_coding	KNOWN	RGAG4	2	2	0.629440
chrX	72159845	72160346	72160095	ENSG00000225471.5	+	transcribed_processed_pseudogene	KNOWN	RP11-262D11.2	1	1	0.235186
chrX	72181353	72302926	72242139	ENSG00000102309.12	+	protein_coding	KNOWN	PIN4	7	6	0.404268
chrX	72198712	72199050	72198881	ENSG00000239577.3	+	misc_RNA	KNOWN	RN7SL388P	1	1	0.676954
chrX	72204657	72239047	72221852	ENSG00000186871.6	-	protein_coding	KNOWN	ERCC6L	2	3	0.320645
chrX	72255679	72277300	72266489	ENSG00000198034.10	-	protein_coding	KNOWN	RPS4X	5	7	0.538092
chrX	72284945	72285045	72284995	ENSG00000238926.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.523149
chrX	72301638	72307187	72304412	ENSG00000125931.10	-	protein_coding	KNOWN	CITED1	10	5	0.064247
chrX	72329516	72573103	72451309	ENSG00000147099.19	-	protein_coding	KNOWN	HDAC8	18	11	0.106527
chrX	72376979	72377169	72377074	ENSG00000222810.1	-	snRNA	KNOWN	RNU2-68P	1	1	0.153392
chrX	72578814	72714319	72646566	ENSG00000067177.14	-	protein_coding	KNOWN	PHKA1	5	33	-0.049026
chrX	72660470	72660719	72660594	ENSG00000225858.1	+	processed_pseudogene	KNOWN	RP1-172N19.3	1	1	-0.135419
chrX	72688950	72712348	72700649	ENSG00000231944.1	+	antisense	KNOWN	PHKA1-AS1	1	5	0.116644
chrX	72726122	72726337	72726229	ENSG00000273788.1	-	snoRNA	NOVEL	U3	1	1	-0.030492
chrX	72727977	72728821	72728399	ENSG00000213698.2	-	processed_pseudogene	KNOWN	RP1-172N19.4	1	1	-0.030492
chrX	72740706	72740869	72740787	ENSG00000201271.1	-	snRNA	KNOWN	RNU1-112P	1	1	-0.139334
chrX	72777009	72848802	72812905	ENSG00000184911.14	+	protein_coding	KNOWN	DMRTC1B	7	7	0.025505
chrX	72777608	72779097	72778352	ENSG00000269911.1	+	sense_intronic	KNOWN	RP1-172N19.5	1	1	0.034276
chrX	72781883	72782594	72782238	ENSG00000268994.2	-	lincRNA	KNOWN	RP1-172N19.1	1	3	0.034276
chrX	72807425	72808210	72807817	ENSG00000225396.5	-	lincRNA	KNOWN	RP11-69A21.2	2	3	0.297461
chrX	72872025	72943814	72907919	ENSG00000269502.5	-	protein_coding	KNOWN	DMRTC1	4	6	0.049506
chrX	72938163	72938958	72938560	ENSG00000275520.1	+	lincRNA	KNOWN	LINC00684	2	3	0.417392
chrX	72998388	73002856	73000622	ENSG00000226725.2	-	antisense	KNOWN	PABPC1L2B-AS1	1	4	-0.026653
chrX	73003517	73005713	73004615	ENSG00000184388.5	+	protein_coding	KNOWN	PABPC1L2B	1	1	-0.026653
chrX	73077276	73079512	73078394	ENSG00000186288.5	-	protein_coding	KNOWN	PABPC1L2A	1	1	-0.020483
chrX	73080167	73084635	73082401	ENSG00000231963.1	+	antisense	KNOWN	PABPC1L2B-AS1	1	4	-0.020483
chrX	73126037	73128080	73127058	ENSG00000204118.1	-	protein_coding	KNOWN	NAP1L6	1	1	-0.481475
chrX	73212299	73214848	73213573	ENSG00000186462.8	-	protein_coding	KNOWN	NAP1L2	1	1	-0.574584
chrX	73223124	73223558	73223341	ENSG00000230311.2	+	processed_pseudogene	KNOWN	TOMM20P4	1	1	-0.574584
chrX	73237647	73238709	73238178	ENSG00000237014.1	-	processed_pseudogene	KNOWN	AC004074.4	1	1	-0.279102
chrX	73274785	73275515	73275150	ENSG00000225664.3	+	processed_pseudogene	KNOWN	YWHAZP8	1	1	-0.365215
chrX	73397531	73397637	73397584	ENSG00000207486.1	-	snRNA	KNOWN	RNU6-1044P	1	1	-0.253783
chrX	73447254	73455245	73451249	ENSG00000131264.3	+	protein_coding	KNOWN	CDX4	1	3	-0.237433
chrX	73474563	73474830	73474696	ENSG00000233162.1	+	processed_pseudogene	KNOWN	MORF4L1P6	1	1	-0.593135
chrX	73524275	73563085	73543680	ENSG00000269904.2	-	transcribed_processed_pseudogene	KNOWN	MAP2K4P1	2	2	-0.374708
chrX	73535503	73536241	73535872	ENSG00000237475.2	+	processed_pseudogene	KNOWN	RPL7P53	1	1	-0.357811
chrX	73563200	73687102	73625151	ENSG00000204116.11	+	protein_coding	KNOWN	CHIC1	4	7	-0.007893
chrX	73769248	73770423	73769835	ENSG00000230146.1	+	processed_pseudogene	KNOWN	SEPHS1P4	1	1	-0.157134
chrX	73792205	73829231	73810718	ENSG00000270641.1	+	lincRNA	KNOWN	TSIX	1	1	-0.042408
chrX	73820651	73852753	73836702	ENSG00000229807.9	-	lincRNA	KNOWN	XIST	10	6	-0.264048
chrX	73821657	73821724	73821690	ENSG00000274655.1	-	misc_RNA	NOVEL	XIST_intron	1	1	-0.050613
chrX	73831145	73831270	73831207	ENSG00000277577.1	-	misc_RNA	NOVEL	Xist_exon4	1	1	-0.402773
chrX	73850487	73850571	73850529	ENSG00000278039.1	+	misc_RNA	NOVEL	Xist_exon1	1	1	0.018928
chrX	73875068	73875635	73875351	ENSG00000182707.4	+	processed_pseudogene	KNOWN	FXYD6P3	1	2	0.406865
chrX	73944324	74070408	74007366	ENSG00000225470.6	+	lincRNA	KNOWN	JPX	12	5	-0.077609
chrX	73944332	73944466	73944399	ENSG00000274430.1	+	misc_RNA	NOVEL	JPX_1	1	1	-0.063286
chrX	73944595	73944663	73944629	ENSG00000276784.1	+	misc_RNA	NOVEL	JPX_2	1	1	-0.063286
chrX	73948973	73949558	73949265	ENSG00000228906.1	+	lincRNA	KNOWN	RP13-216E22.4	1	2	-0.063286
chrX	73958059	73969485	73963772	ENSG00000271199.1	-	sense_overlapping	KNOWN	RP13-216E22.5	1	2	0.391552
chrX	73963955	74293574	74128764	ENSG00000230590.7	-	lincRNA	KNOWN	FTX	10	7	0.020278
chrX	74009389	74011468	74010428	ENSG00000270223.1	-	sense_intronic	KNOWN	RP13-36G14.4	1	2	-0.313275
chrX	74031462	74031820	74031641	ENSG00000233984.1	+	processed_pseudogene	KNOWN	RPSAP14	1	1	-0.060011
chrX	74066083	74066592	74066337	ENSG00000203397.2	+	processed_pseudogene	KNOWN	RP13-36G14.3	1	1	-0.410509
chrX	74069276	74070832	74070054	ENSG00000234969.1	+	processed_pseudogene	KNOWN	RP13-33H18.1	1	2	-0.392335
chrX	74105572	74107958	74106765	ENSG00000223650.1	+	processed_pseudogene	KNOWN	UHRF2P1	1	1	0.107759
chrX	74121012	74131923	74126467	ENSG00000232928.2	+	processed_pseudogene	KNOWN	DDX3P1	1	2	0.089510
chrX	74122134	74122725	74122429	ENSG00000280375.1	-	TEC	KNOWN	RP13-204A15.5	1	1	0.091992
chrX	74133004	74133114	74133059	ENSG00000230986.1	-	processed_pseudogene	KNOWN	DDX3P2	1	1	0.077917
chrX	74161062	74162528	74161795	ENSG00000224430.2	-	processed_pseudogene	KNOWN	MKRN5P	1	1	0.110370
chrX	74173890	74174066	74173978	ENSG00000231549.1	+	processed_pseudogene	KNOWN	USMG5P1	1	1	0.106942
chrX	74185929	74187153	74186541	ENSG00000204113.6	+	processed_pseudogene	KNOWN	BMP2KL	1	1	0.106942
chrX	74200229	74242148	74221188	ENSG00000271430.1	-	sense_intronic	KNOWN	RP3-368A4.5	1	2	0.217429
chrX	74202834	74204595	74203714	ENSG00000228492.2	+	processed_pseudogene	KNOWN	RAB11FIP1P1	1	1	0.000069
chrX	74209976	74213660	74211818	ENSG00000271533.1	-	sense_intronic	KNOWN	RP3-368A4.6	1	1	0.476025
chrX	74218373	74218484	74218428	ENSG00000202566.3	-	miRNA	KNOWN	MIR421	1	1	0.479015
chrX	74218517	74218628	74218572	ENSG00000212027.2	-	miRNA	KNOWN	MIR374B	1	1	0.479015
chrX	74242608	74242908	74242758	ENSG00000265727.2	-	misc_RNA	KNOWN	RN7SL648P	1	1	-0.038405
chrX	74274341	74274411	74274376	ENSG00000278421.1	+	misc_RNA	NOVEL	FTX_1	1	1	0.226641
chrX	74280402	74280495	74280448	ENSG00000273974.1	+	misc_RNA	NOVEL	FTX_2	1	1	0.226641
chrX	74280936	74281082	74281009	ENSG00000275254.1	+	misc_RNA	NOVEL	FTX_3	1	1	0.226641
chrX	74281703	74281849	74281776	ENSG00000275625.1	+	misc_RNA	NOVEL	FTX_4	1	1	0.226641
chrX	74287104	74287209	74287156	ENSG00000207820.1	-	miRNA	KNOWN	MIR545	1	1	0.226641
chrX	74287276	74287386	74287331	ENSG00000199168.2	-	miRNA	KNOWN	MIR374A	1	1	0.226641
chrX	74293357	74293574	74293465	ENSG00000277922.1	+	misc_RNA	NOVEL	FTX_5	1	1	0.530876
chrX	74304190	74305031	74304610	ENSG00000187969.5	+	protein_coding	KNOWN	ZCCHC13	1	1	0.530876
chrX	74342713	74342860	74342786	ENSG00000226515.1	-	processed_pseudogene	KNOWN	AC004386.3	1	1	0.142618
chrX	74376125	74376885	74376505	ENSG00000213269.2	-	processed_pseudogene	KNOWN	AC004386.4	1	1	-0.217693
chrX	74390692	74390989	74390840	ENSG00000239745.3	+	misc_RNA	KNOWN	RN7SL790P	1	1	0.376969
chrX	74396871	74399550	74398210	ENSG00000230665.3	-	processed_pseudogene	KNOWN	PRKRIRP1	1	2	0.376969
chrX	74409518	74410100	74409809	ENSG00000213695.3	+	processed_pseudogene	KNOWN	RPS7P14	1	1	0.358404
chrX	74421461	74533917	74477689	ENSG00000147100.9	+	protein_coding	KNOWN	SLC16A2	2	6	0.348385
chrX	74473017	74473953	74473485	ENSG00000231206.2	-	processed_pseudogene	KNOWN	HNRNPA1P25	1	1	0.182190
chrX	74583088	74583546	74583317	ENSG00000230673.3	-	processed_pseudogene	KNOWN	PABPC1P3	1	1	0.387448
chrX	74585217	74614617	74599917	ENSG00000131263.12	-	protein_coding	KNOWN	RLIM	2	5	0.275337
chrX	74680053	74680159	74680106	ENSG00000199885.1	+	snRNA	KNOWN	RNU6-330P	1	1	0.122689
chrX	74732849	74925485	74829167	ENSG00000050030.13	-	protein_coding	KNOWN	KIAA2022	3	5	-0.169217
chrX	74769639	74769798	74769718	ENSG00000271589.1	+	processed_pseudogene	KNOWN	RP11-130N24.2	1	1	-0.344872
chrX	75053172	75156732	75104952	ENSG00000131269.15	-	protein_coding	KNOWN	ABCB7	10	16	-0.230680
chrX	75201491	75201790	75201640	ENSG00000229661.1	+	processed_pseudogene	KNOWN	BUD31P2	1	1	-0.393435
chrX	75202703	75202809	75202756	ENSG00000199601.1	+	snRNA	KNOWN	RNU6-562P	1	1	-0.393435
chrX	75274085	75304600	75289342	ENSG00000094841.13	+	protein_coding	KNOWN	UPRT	8	8	0.027301
chrX	75326772	75327999	75327385	ENSG00000232186.1	-	processed_pseudogene	KNOWN	RP11-311P8.2	1	1	-0.140669
chrX	75368427	75523502	75445964	ENSG00000102383.13	-	protein_coding	KNOWN	ZDHHC15	3	12	-0.257479
chrX	75384346	75384828	75384587	ENSG00000233254.1	+	processed_pseudogene	KNOWN	RPL21P134	1	1	0.072363
chrX	75537547	75538702	75538124	ENSG00000237089.2	-	processed_pseudogene	KNOWN	PCNPP4	1	2	-0.418623
chrX	75582676	75585506	75584091	ENSG00000224775.2	+	unprocessed_pseudogene	KNOWN	BRAFP1	1	2	-0.113477
chrX	75740831	75746911	75743871	ENSG00000215105.4	-	processed_pseudogene	KNOWN	TTC3P1	1	1	0.054517
chrX	75782988	75785236	75784112	ENSG00000186675.6	-	protein_coding	KNOWN	MAGEE2	1	1	-0.229936
chrX	75884546	75885136	75884841	ENSG00000233063.2	+	processed_pseudogene	KNOWN	SAR1AP4	1	1	-0.460549
chrX	75888700	75888888	75888794	ENSG00000226753.1	+	processed_pseudogene	KNOWN	RP11-212D3.2	1	1	-0.460549
chrX	75903105	75904858	75903981	ENSG00000226854.1	+	lincRNA	KNOWN	RP11-212D3.4	1	2	-0.164348
chrX	76029895	76030330	76030112	ENSG00000232332.1	+	processed_pseudogene	KNOWN	RP3-481A17.1	1	1	-0.194477
chrX	76172936	76178204	76175570	ENSG00000102390.10	+	protein_coding	KNOWN	PBDC1	2	6	0.003455
chrX	76222637	76223097	76222867	ENSG00000237252.1	+	processed_pseudogene	KNOWN	RP11-322A17.1	1	1	-0.029024
chrX	76244968	76245074	76245021	ENSG00000201826.1	+	snRNA	KNOWN	RNU6-867P	1	1	-0.328340
chrX	76250183	76251796	76250989	ENSG00000274398.1	-	processed_pseudogene	KNOWN	RP11-322A17.3	1	1	-0.463527
chrX	76334841	76335845	76335343	ENSG00000213684.4	-	processed_pseudogene	KNOWN	LDHBP2	1	1	-0.374185
chrX	76427724	76431353	76429538	ENSG00000198934.4	+	protein_coding	KNOWN	MAGEE1	1	1	-0.186404
chrX	76655009	76655127	76655068	ENSG00000223259.1	-	rRNA	KNOWN	RNA5SP508	1	1	-0.052398
chrX	76655498	76656559	76656028	ENSG00000235447.2	-	processed_pseudogene	KNOWN	TRAPPC13P1	1	1	-0.052398
chrX	76657798	77014532	76836165	ENSG00000280870.2	-	lincRNA	KNOWN	MIR325HG	9	4	-0.271850
chrX	77005404	77005501	77005452	ENSG00000207995.1	-	miRNA	KNOWN	MIR325	1	1	0.091992
chrX	77066709	77066827	77066768	ENSG00000201447.1	+	rRNA	KNOWN	RNA5SP509	1	1	-0.429961
chrX	77374212	77381319	77377765	ENSG00000234404.2	+	processed_pseudogene	KNOWN	BX682235.1	1	2	-0.179813
chrX	77447405	77457278	77452341	ENSG00000196468.7	+	protein_coding	KNOWN	FGF16	1	3	0.213156
chrX	77504878	77786269	77645573	ENSG00000085224.20	-	protein_coding	KNOWN	ATRX	19	36	-0.044410
chrX	77727867	77728080	77727973	ENSG00000237106.2	+	processed_pseudogene	KNOWN	FABP5P15	1	1	0.284637
chrX	77826364	77895593	77860978	ENSG00000102158.19	-	protein_coding	KNOWN	MAGT1	5	10	0.373140
chrX	77837289	77837395	77837342	ENSG00000200906.1	+	snRNA	KNOWN	RNU6-854P	1	1	0.340812
chrX	77885377	77885634	77885505	ENSG00000263410.2	+	misc_RNA	KNOWN	RN7SL460P	1	1	0.648385
chrX	77899438	77907373	77903405	ENSG00000131174.4	+	protein_coding	KNOWN	COX7B	3	4	0.122049
chrX	77910656	78050395	77980525	ENSG00000165240.17	+	protein_coding	KNOWN	ATP7A	3	24	0.021465
chrX	77910741	77964890	77937815	ENSG00000248503.2	+	transcribed_processed_pseudogene	KNOWN	RP5-1000K24.2	2	2	0.108238
chrX	77968874	77969638	77969256	ENSG00000226784.2	-	protein_coding	KNOWN	PGAM4	1	1	0.227875
chrX	78065188	78129296	78097242	ENSG00000102144.13	+	protein_coding	KNOWN	PGK1	5	11	0.139475
chrX	78129748	78139706	78134727	ENSG00000187325.4	-	protein_coding	KNOWN	TAF9B	2	7	0.266243
chrX	78165696	78172422	78169059	ENSG00000223592.2	-	unitary_pseudogene	KNOWN	FNDC3CP	1	11	0.274292
chrX	78271464	78327691	78299577	ENSG00000173198.5	-	protein_coding	KNOWN	CYSLTR1	3	3	-0.266249
chrX	78519593	78520186	78519889	ENSG00000224755.1	-	processed_pseudogene	KNOWN	HMGN1P34	1	2	-0.058034
chrX	78554412	78554751	78554581	ENSG00000235061.3	-	processed_pseudogene	KNOWN	UBE2V1P7	1	1	-0.111542
chrX	78656069	78659328	78657698	ENSG00000179300.3	-	protein_coding	KNOWN	ZCCHC5	1	2	0.373405
chrX	78699384	78699891	78699637	ENSG00000271433.1	-	processed_pseudogene	KNOWN	PPATP2	1	1	-0.823944
chrX	78747709	78757094	78752401	ENSG00000147145.12	+	protein_coding	KNOWN	LPAR4	5	5	-0.240466
chrX	78763226	78763899	78763562	ENSG00000227645.2	+	processed_pseudogene	KNOWN	RPL7P54	1	1	-0.334273
chrX	78945332	78961954	78953643	ENSG00000078589.12	+	protein_coding	KNOWN	P2RY10	4	4	-0.433708
chrX	79084936	79085848	79085392	ENSG00000232168.2	+	processed_pseudogene	KNOWN	P2RY10P2	1	1	-0.234236
chrX	79158031	79158119	79158075	ENSG00000280897.1	+	miRNA	NOVEL	AL590222.1	1	1	-0.311905
chrX	79170972	79172229	79171600	ENSG00000147138.1	+	protein_coding	KNOWN	GPR174	1	1	-0.127575
chrX	79177200	79177668	79177434	ENSG00000271005.1	-	processed_pseudogene	KNOWN	CTHRC1P1	1	1	-0.127575
chrX	79323446	79325217	79324331	ENSG00000225025.2	+	processed_pseudogene	KNOWN	KIF4CP	1	3	-0.067207
chrX	79360384	79367667	79364025	ENSG00000078596.10	-	protein_coding	KNOWN	ITM2A	6	6	-0.554371
chrX	79369364	79370165	79369764	ENSG00000270268.1	-	processed_pseudogene	KNOWN	RP1-164L12.1	1	1	-0.617043
chrX	80014756	80031769	80023262	ENSG00000122145.14	+	protein_coding	KNOWN	TBX22	5	9	-0.261398
chrX	80101220	80101308	80101264	ENSG00000266822.2	-	miRNA	NOVEL	AL049791.1	1	1	-0.241746
chrX	80228489	80335364	80281926	ENSG00000278530.4	-	unitary_pseudogene	KNOWN	CHMP1B2P	2	8	-0.313827
chrX	80335504	80445311	80390407	ENSG00000174016.11	+	protein_coding	KNOWN	FAM46D	2	5	-0.323880
chrX	80529037	80530027	80529532	ENSG00000230247.2	+	processed_pseudogene	KNOWN	HNRNPH3P1	1	2	-0.297728
chrX	80560146	80562054	80561100	ENSG00000228051.1	+	processed_pseudogene	KNOWN	RP11-325E14.2	1	1	-0.197515
chrX	80571871	80574607	80573239	ENSG00000228612.2	-	processed_pseudogene	KNOWN	HK2P1	1	1	-0.058568
chrX	80670854	80809688	80740271	ENSG00000165288.10	-	protein_coding	KNOWN	BRWD3	5	41	0.005575
chrX	80709928	80710705	80710316	ENSG00000225715.1	+	processed_pseudogene	KNOWN	RP11-325E14.5	1	1	-0.088654
chrX	80857076	80857202	80857139	ENSG00000239008.1	-	snoRNA	NOVEL	ACA64	1	1	-0.174523
chrX	80900757	80900864	80900810	ENSG00000212623.1	+	snRNA	KNOWN	RNU6-493P	1	1	0.140355
chrX	80929500	80930347	80929923	ENSG00000073905.8	+	processed_pseudogene	KNOWN	VDAC1P1	1	1	-0.131738
chrX	80936434	80936540	80936487	ENSG00000212546.1	+	snRNA	KNOWN	RNU6-995P	1	1	-0.305768
chrX	81113701	81201942	81157821	ENSG00000198157.10	-	protein_coding	KNOWN	HMGN5	7	9	-0.288319
chrX	81201943	81298547	81250245	ENSG00000131171.12	+	protein_coding	KNOWN	SH3BGRL	4	5	0.008058
chrX	81240820	81240901	81240860	ENSG00000264374.1	+	miRNA	NOVEL	AL357115.1	1	1	-0.164784
chrX	81363268	81364170	81363719	ENSG00000231875.1	+	processed_pseudogene	KNOWN	RP11-346E8.1	1	1	-0.128134
chrX	81408938	81427276	81418107	ENSG00000224523.1	+	unprocessed_pseudogene	KNOWN	RP13-52K8.1	1	5	-0.107899
chrX	81600072	81601306	81600689	ENSG00000233446.2	+	processed_pseudogene	KNOWN	XXyac-YR12DB5.1	1	1	0.273830
chrX	82001220	82001327	82001273	ENSG00000206826.1	-	snRNA	KNOWN	RNU6-974P	1	1	-0.174523
chrX	82497669	82497924	82497796	ENSG00000228041.2	-	processed_pseudogene	KNOWN	RP4-581F12.1	1	1	-0.362574
chrX	82506434	82506812	82506623	ENSG00000213653.4	-	processed_pseudogene	KNOWN	RPL22P22	1	1	-0.362574
chrX	82561201	82561347	82561274	ENSG00000202183.1	+	snoRNA	NOVEL	SNORA4	1	1	-0.370980
chrX	82675638	82675727	82675682	ENSG00000275182.1	-	miRNA	NOVEL	AL022574.1	1	1	-0.734677
chrX	82875649	82875885	82875767	ENSG00000236365.1	+	processed_pseudogene	KNOWN	RP5-849L7.1	1	1	-0.389135
chrX	82998699	82999236	82998967	ENSG00000232735.2	+	processed_pseudogene	KNOWN	ATG4AP1	1	1	-0.380077
chrX	83506023	83509214	83507618	ENSG00000279437.1	-	TEC	KNOWN	RP3-326L13.2	1	1	-0.207568
chrX	83508250	83512127	83510188	ENSG00000196767.6	+	protein_coding	KNOWN	POU3F4	1	1	-0.230921
chrX	83559896	83560312	83560104	ENSG00000236870.2	-	processed_pseudogene	KNOWN	RP1-223D17.1	1	1	-0.424258
chrX	83748825	83749939	83749382	ENSG00000215102.2	-	processed_pseudogene	KNOWN	TERF1P4	1	1	-0.335429
chrX	83861126	83886699	83873912	ENSG00000183035.12	+	protein_coding	KNOWN	CYLC1	2	5	-0.642269
chrX	84058346	84187907	84123126	ENSG00000072133.10	-	protein_coding	KNOWN	RPS6KA6	4	22	-0.107154
chrX	84225752	84225828	84225790	ENSG00000221494.1	-	miRNA	KNOWN	MIR548I4	1	1	-0.492971
chrX	84317874	84502479	84410176	ENSG00000165259.13	-	protein_coding	KNOWN	HDX	6	11	-0.347323
chrX	84403898	84404024	84403961	ENSG00000233484.2	-	transcribed_processed_pseudogene	KNOWN	RP11-74B21.1	1	1	-0.309371
chrX	84755136	84756003	84755569	ENSG00000237211.2	+	processed_pseudogene	KNOWN	SETP4	1	1	0.237190
chrX	84934151	84934890	84934520	ENSG00000229547.4	+	transcribed_processed_pseudogene	KNOWN	UBE2DNL	4	2	-0.299433
chrX	84973217	84977829	84975523	ENSG00000230781.1	+	unitary_pseudogene	KNOWN	RP1-215K18.4	1	3	0.091992
chrX	85003826	85093316	85048571	ENSG00000155008.13	+	protein_coding	KNOWN	APOOL	3	10	0.001160
chrX	85092287	85109048	85100667	ENSG00000184788.12	-	protein_coding	KNOWN	SATL1	2	6	-0.121002
chrX	85207187	85210649	85208918	ENSG00000276391.1	+	processed_pseudogene	KNOWN	RP5-928E24.4	1	3	-0.286858
chrX	85210706	85219698	85215202	ENSG00000235461.1	+	lincRNA	KNOWN	RP5-928E24.2	1	4	-0.492971
chrX	85244032	85273362	85258697	ENSG00000147180.16	+	protein_coding	KNOWN	ZNF711	3	10	-0.551662
chrX	85244095	85244171	85244133	ENSG00000264517.1	+	miRNA	NOVEL	AC003001.1	1	1	-0.417683
chrX	85277396	85379743	85328569	ENSG00000124429.17	-	protein_coding	KNOWN	POF1B	2	17	-0.514156
chrX	85849410	85850139	85849774	ENSG00000223707.2	-	processed_pseudogene	KNOWN	SFR1P2	1	1	-0.355989
chrX	85851575	85851682	85851628	ENSG00000276892.1	-	processed_pseudogene	KNOWN	RP1-93L7.4	1	1	0.220316
chrX	85861180	86047562	85954371	ENSG00000188419.13	-	protein_coding	KNOWN	CHM	5	15	0.052022
chrX	85903611	85903722	85903666	ENSG00000199051.2	-	miRNA	KNOWN	MIR361	1	1	-0.040112
chrX	86019608	86019715	86019661	ENSG00000199567.1	+	misc_RNA	NOVEL	Y_RNA	1	1	0.345748
chrX	86066227	86066468	86066347	ENSG00000234039.2	-	processed_pseudogene	KNOWN	NDUFA5P7	1	1	-0.261645
chrX	86084716	86086339	86085527	ENSG00000225536.2	-	processed_pseudogene	KNOWN	STIP1P3	1	1	-0.341661
chrX	86128893	86129570	86129231	ENSG00000223574.1	-	processed_pseudogene	KNOWN	TPMTP4	1	1	-0.192985
chrX	86148458	86832604	86490531	ENSG00000126733.20	+	protein_coding	KNOWN	DACH2	8	13	-0.406820
chrX	86160264	86161359	86160811	ENSG00000215093.3	-	processed_pseudogene	KNOWN	EEF1A1P29	1	1	-0.152427
chrX	86304367	86305086	86304726	ENSG00000223772.1	+	processed_pseudogene	KNOWN	GEMIN8P3	1	1	-0.094886
chrX	86481028	86481130	86481079	ENSG00000277717.1	+	snRNA	NOVEL	U6	1	1	-0.364866
chrX	86481532	86481813	86481672	ENSG00000231478.1	+	transcribed_processed_pseudogene	KNOWN	FCF1P9	1	1	-0.364866
chrX	86798598	86799226	86798912	ENSG00000271290.1	-	processed_pseudogene	KNOWN	RP11-345E19.2	1	1	-0.150579
chrX	86888586	86888816	86888701	ENSG00000236190.1	+	processed_pseudogene	KNOWN	RP3-431C21.1	1	1	0.339919
chrX	87143854	87144748	87144301	ENSG00000271457.1	-	processed_pseudogene	KNOWN	RP11-192B18.1	1	2	-0.168071
chrX	87146733	87146804	87146768	ENSG00000200422.1	+	snoRNA	NOVEL	SNORD45	1	1	-0.168071
chrX	87425583	87425690	87425636	ENSG00000230478.1	-	processed_pseudogene	KNOWN	RP1-52D1.1	1	1	-0.201205
chrX	87517749	87670050	87593899	ENSG00000102271.13	+	protein_coding	KNOWN	KLHL4	2	11	-0.213689
chrX	87703343	87704203	87703773	ENSG00000237506.3	-	processed_pseudogene	KNOWN	RPSAP15	1	1	-0.079775
chrX	87707579	87750883	87729231	ENSG00000282914.1	-	lincRNA	KNOWN	RP1-138A5.3	1	3	-0.503505
chrX	87723089	87723238	87723163	ENSG00000271205.1	-	processed_pseudogene	KNOWN	RP1-138A5.2	1	1	-0.462597
chrX	87806433	87806769	87806601	ENSG00000270446.1	-	processed_pseudogene	KNOWN	RP6-43L17.1	1	1	-0.859099
chrX	87807549	87809883	87808716	ENSG00000271056.1	-	processed_pseudogene	KNOWN	RP6-43L17.2	1	2	-0.859099
chrX	88061590	88062844	88062217	ENSG00000230706.2	-	processed_pseudogene	KNOWN	RP5-998G20.1	1	1	-0.749310
chrX	88096393	88097225	88096809	ENSG00000230956.2	-	processed_pseudogene	KNOWN	RP3-452M16.1	1	1	-0.621704
chrX	88148792	88148918	88148855	ENSG00000252016.1	+	snoRNA	NOVEL	ACA64	1	1	-0.238654
chrX	88369343	88369459	88369401	ENSG00000271693.1	+	processed_pseudogene	KNOWN	CTD-2194M22.1	1	1	-0.565120
chrX	88747225	88754785	88751005	ENSG00000147183.9	+	protein_coding	KNOWN	CPXCR1	3	3	-0.375717
chrX	88827554	88829858	88828706	ENSG00000271157.1	-	processed_pseudogene	KNOWN	RP1-249C1.1	1	2	-0.598680
chrX	88908403	88908763	88908583	ENSG00000232576.2	+	processed_pseudogene	KNOWN	RP11-137D19.1	1	1	-0.136827
chrX	88982215	88982353	88982284	ENSG00000270745.1	-	processed_pseudogene	KNOWN	RP13-324D24.1	1	1	-0.405508
chrX	89367435	89367600	89367517	ENSG00000224065.2	-	processed_pseudogene	KNOWN	SRIP2	1	1	-0.547833
chrX	89423738	89446983	89435360	ENSG00000225012.5	+	lincRNA	KNOWN	RP13-348B13.2	2	3	-0.508075
chrX	89790335	89790451	89790393	ENSG00000221005.1	+	miRNA	NOVEL	AL161723.1	1	1	-0.458205
chrX	89921882	89922883	89922382	ENSG00000153779.9	+	protein_coding	KNOWN	TGIF2LX	3	3	-0.746257
chrX	90039213	90039834	90039523	ENSG00000227581.2	-	processed_pseudogene	KNOWN	RP13-140E4.1	1	1	-0.492971
chrX	90112650	90113706	90113178	ENSG00000226081.2	+	processed_pseudogene	KNOWN	USP12PX	1	1	-0.328584
chrX	90208895	90209418	90209156	ENSG00000274022.1	-	processed_pseudogene	KNOWN	RP13-362E11.3	1	1	-0.233995
chrX	90209796	90210420	90210108	ENSG00000227434.2	-	processed_pseudogene	KNOWN	RNF19BPX	1	1	-0.166059
chrX	90289536	90289903	90289719	ENSG00000229667.2	-	processed_pseudogene	KNOWN	UBE2V1P9	1	1	-0.673543
chrX	90597235	90597340	90597287	ENSG00000207515.1	-	snRNA	KNOWN	RNU6-555P	1	1	-0.471909
chrX	91307781	91308878	91308329	ENSG00000206062.4	+	lincRNA	KNOWN	RP13-212L9.1	1	2	-0.779275
chrX	91414878	91434999	91424938	ENSG00000234161.1	-	antisense	KNOWN	PABPC5-AS1	1	4	-0.387081
chrX	91422309	91422538	91422423	ENSG00000236413.2	+	processed_pseudogene	KNOWN	RP13-24G8.2	1	1	-0.442345
chrX	91434595	91438584	91436589	ENSG00000174740.7	+	protein_coding	KNOWN	PABPC5	2	2	-0.219952
chrX	91560436	91561597	91561016	ENSG00000230275.2	-	processed_pseudogene	KNOWN	SERBP1P4	1	1	-0.349714
chrX	91779261	92623230	92201245	ENSG00000102290.21	+	protein_coding	KNOWN	PCDH11X	9	7	-0.365333
chrX	91798093	91798283	91798188	ENSG00000222440.1	+	snRNA	KNOWN	RNU2-26P	1	1	0.150885
chrX	91982655	91983505	91983080	ENSG00000234702.1	-	processed_pseudogene	KNOWN	VDAC1P3	1	1	-0.287856
chrX	92113246	92114461	92113853	ENSG00000229132.2	-	processed_pseudogene	KNOWN	EIF4A1P10	1	1	0.050172
chrX	92459670	92460952	92460311	ENSG00000215089.3	+	processed_pseudogene	KNOWN	KRT18P11	1	1	-0.753286
chrX	92460452	92460545	92460498	ENSG00000211526.1	+	miRNA	NOVEL	AL121869.1	1	1	-0.753286
chrX	92515323	92515497	92515410	ENSG00000230543.1	-	processed_pseudogene	KNOWN	SNX3P1X	1	1	-0.393435
chrX	92676519	92676954	92676736	ENSG00000225912.1	-	processed_pseudogene	KNOWN	RP13-258O15.1	1	1	-0.219210
chrX	93042490	93042942	93042716	ENSG00000237873.1	+	processed_pseudogene	KNOWN	RP11-156J23.1	1	1	0.107422
chrX	93222220	93225015	93223617	ENSG00000234130.2	-	processed_pseudogene	KNOWN	RP13-88F20.1	1	1	-0.660915
chrX	93287733	93288759	93288246	ENSG00000234322.1	-	processed_pseudogene	KNOWN	ST13P18	1	1	0.223236
chrX	93388075	93389497	93388786	ENSG00000237381.2	-	processed_pseudogene	KNOWN	RP3-455H14.1	1	1	-0.976721
chrX	93573834	93574579	93574206	ENSG00000228301.1	+	processed_pseudogene	KNOWN	RPL7P55	1	1	0.073133
chrX	93670930	93673568	93672249	ENSG00000186310.9	-	protein_coding	KNOWN	NAP1L3	2	2	-0.446874
chrX	93674013	93712274	93693143	ENSG00000179083.6	+	protein_coding	KNOWN	FAM133A	2	4	-0.114284
chrX	93776911	93777384	93777147	ENSG00000270826.1	-	processed_pseudogene	KNOWN	RP1-60G11.1	1	1	-0.376157
chrX	94003815	94003922	94003868	ENSG00000212495.1	-	snRNA	KNOWN	RNU6-332P	1	1	-0.302287
chrX	94178005	94178106	94178055	ENSG00000202410.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-1.109642
chrX	94319038	94320025	94319531	ENSG00000227521.2	+	processed_pseudogene	KNOWN	RP13-213K19.1	1	1	-0.537365
chrX	94636663	94639570	94638116	ENSG00000232293.2	-	processed_pseudogene	KNOWN	PAICSP7	1	2	-0.553725
chrX	94776739	94777567	94777153	ENSG00000231001.2	-	processed_pseudogene	KNOWN	CCNB1IP1P3	1	1	-0.328340
chrX	94893501	94893593	94893547	ENSG00000221665.1	+	miRNA	NOVEL	AL591708.1	1	1	-0.756005
chrX	95063141	95063226	95063183	ENSG00000221187.1	-	miRNA	KNOWN	MIR548M	1	1	0.024878
chrX	95134279	95134372	95134325	ENSG00000212098.1	+	miRNA	NOVEL	AL390966.1	1	1	-0.828574
chrX	95453369	95453581	95453475	ENSG00000271094.1	+	processed_pseudogene	KNOWN	RP3-380C13.2	1	1	-0.715363
chrX	95499604	95500036	95499820	ENSG00000223467.2	+	processed_pseudogene	KNOWN	CALM1P1	1	1	-0.484509
chrX	95582064	95582162	95582113	ENSG00000201567.1	+	rRNA	KNOWN	RNA5SP510	1	1	-0.286520
chrX	95584303	95584942	95584622	ENSG00000215085.4	+	processed_pseudogene	KNOWN	RP11-471G13.2	1	1	-0.286520
chrX	95610578	95610957	95610767	ENSG00000236185.1	+	processed_pseudogene	KNOWN	HNRNPDLP3	1	1	-0.225198
chrX	95638375	95638924	95638649	ENSG00000226307.1	+	processed_pseudogene	KNOWN	HNRNPDLP1	1	1	-0.410509
chrX	95679130	95679627	95679378	ENSG00000235425.2	-	processed_pseudogene	KNOWN	RPS7P13	1	1	-0.142473
chrX	95720243	95721144	95720693	ENSG00000270583.1	+	processed_pseudogene	KNOWN	RP11-471G13.5	1	1	-0.149016
chrX	95973328	95974315	95973821	ENSG00000232842.2	-	processed_pseudogene	KNOWN	RP5-961K14.1	1	1	-0.396508
chrX	96023360	96023652	96023506	ENSG00000242998.3	+	misc_RNA	KNOWN	RN7SL379P	1	1	-0.767831
chrX	96070669	96071778	96071223	ENSG00000203262.3	-	processed_pseudogene	KNOWN	RP5-961K14.2	1	1	-0.264702
chrX	96195477	96195617	96195547	ENSG00000232069.1	+	processed_pseudogene	KNOWN	RPS29P28	1	1	-0.006412
chrX	96337236	96337912	96337574	ENSG00000271209.1	-	processed_pseudogene	KNOWN	BRDTP1	1	1	-0.336102
chrX	96410432	96410782	96410607	ENSG00000223260.1	-	misc_RNA	KNOWN	RN7SKP194	1	1	0.159106
chrX	96620654	96621903	96621278	ENSG00000229693.2	+	processed_pseudogene	KNOWN	RP11-25C15.1	1	1	-0.246810
chrX	96684663	97604997	97144830	ENSG00000147202.17	+	protein_coding	KNOWN	DIAPH2	5	28	-0.083965
chrX	96701507	96701619	96701563	ENSG00000207426.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.438642
chrX	96883908	96885467	96884687	ENSG00000204086.4	+	protein_coding	KNOWN	RPA4	1	1	-0.164348
chrX	96953630	96954195	96953912	ENSG00000214628.3	-	processed_pseudogene	KNOWN	RP11-392M9.2	1	1	-0.264943
chrX	97081674	97081956	97081815	ENSG00000277900.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.422581
chrX	97341046	97341344	97341195	ENSG00000265260.2	+	misc_RNA	KNOWN	RN7SL74P	1	1	-0.156829
chrX	97431286	97642589	97536937	ENSG00000236256.9	-	antisense	KNOWN	DIAPH2-AS1	4	6	-0.068976
chrX	97847263	97849017	97848140	ENSG00000233887.1	+	processed_pseudogene	KNOWN	ERVWE2	1	1	-0.063659
chrX	97906644	97908090	97907367	ENSG00000237752.2	+	processed_pseudogene	KNOWN	RP13-75G22.1	1	1	0.091992
chrX	97975878	97978641	97977259	ENSG00000234889.2	-	processed_pseudogene	KNOWN	RP13-130D24.1	1	1	0.163250
chrX	98251679	98252543	98252111	ENSG00000236243.2	+	processed_pseudogene	KNOWN	RPL6P29	1	1	0.013989
chrX	98348451	98348748	98348599	ENSG00000271322.1	-	processed_pseudogene	KNOWN	RP11-390F10.3	1	1	-0.444061
chrX	98389512	98390919	98390215	ENSG00000213704.3	+	processed_pseudogene	KNOWN	EEF1A1P15	1	1	-0.084295
chrX	98422138	98422809	98422473	ENSG00000226837.2	+	processed_pseudogene	KNOWN	HMGB1P32	1	2	-0.149016
chrX	98573859	98864984	98719421	ENSG00000281566.2	+	lincRNA	KNOWN	RP11-485F13.1	2	6	-0.273375
chrX	99385195	99385276	99385235	ENSG00000252430.1	-	miRNA	NOVEL	AL109750.1	1	1	-0.453004
chrX	99656997	99657381	99657189	ENSG00000270308.1	+	processed_pseudogene	KNOWN	RP3-377O6.2	1	1	-0.513729
chrX	99719364	99721158	99720261	ENSG00000215070.4	-	processed_pseudogene	KNOWN	XRCC6P5	1	1	-0.557822
chrX	99886740	99887691	99887215	ENSG00000229946.2	-	processed_pseudogene	KNOWN	B3GNT2P1	1	1	-0.297420
chrX	100100084	100100172	100100128	ENSG00000252296.2	+	snoRNA	NOVEL	SNORA25	1	1	-0.189421
chrX	100149783	100151340	100150561	ENSG00000236988.2	-	processed_pseudogene	KNOWN	RP11-402K9.1	1	1	-0.279376
chrX	100155885	100156773	100156329	ENSG00000230592.2	-	processed_pseudogene	KNOWN	RPSAP8	1	1	-0.295031
chrX	100249212	100249313	100249262	ENSG00000275864.1	-	miRNA	NOVEL	AL355593.1	1	1	-0.618502
chrX	100291644	100410273	100350958	ENSG00000165194.14	-	protein_coding	KNOWN	PCDH19	4	6	-0.234878
chrX	100584802	100599885	100592343	ENSG00000000005.5	+	protein_coding	KNOWN	TNMD	2	7	-0.428734
chrX	100627109	100639991	100633550	ENSG00000000003.14	-	protein_coding	KNOWN	TSPAN6	5	8	0.100391
chrX	100644218	100671299	100657758	ENSG00000102359.5	+	protein_coding	KNOWN	SRPX2	2	11	0.573690
chrX	100673330	100673981	100673655	ENSG00000261295.1	+	antisense	KNOWN	RP11-524D16__A.3	1	1	0.268870
chrX	100674491	100732123	100703307	ENSG00000102362.15	-	protein_coding	KNOWN	SYTL4	6	19	-0.003583
chrX	100800303	100800784	100800543	ENSG00000223819.2	-	processed_pseudogene	KNOWN	RP3-347M6.1	1	1	0.028566
chrX	100801188	100803060	100802124	ENSG00000238116.2	+	processed_pseudogene	KNOWN	RP3-347M6.2	1	1	0.028566
chrX	100815865	100817174	100816519	ENSG00000275320.1	-	processed_pseudogene	KNOWN	RP3-347M6.3	1	4	0.110607
chrX	100820359	100840932	100830645	ENSG00000101811.13	+	protein_coding	KNOWN	CSTF2	4	15	-0.003996
chrX	100822620	100822752	100822686	ENSG00000202231.1	-	snoRNA	NOVEL	SNORA9	1	1	0.110607
chrX	100843324	100874345	100858834	ENSG00000007952.17	-	protein_coding	KNOWN	NOX1	5	13	0.152098
chrX	100855288	100856379	100855833	ENSG00000239345.2	-	processed_pseudogene	KNOWN	HNRNPA1P26	1	1	0.247270
chrX	100887636	100888590	100888113	ENSG00000233680.4	-	processed_pseudogene	KNOWN	HNRNPA1P27	1	1	0.109065
chrX	100890396	100890487	100890441	ENSG00000275220.1	+	miRNA	NOVEL	Z83819.1	1	1	-0.164348
chrX	100910712	100911489	100911100	ENSG00000179031.8	+	processed_pseudogene	KNOWN	LL0XNC01-131B10.2	1	1	0.360809
chrX	100913445	100929433	100921439	ENSG00000182489.8	-	protein_coding	KNOWN	XKRX	2	3	0.360809
chrX	100956593	100957538	100957065	ENSG00000182574.8	+	processed_pseudogene	KNOWN	RP3-341D10.1	1	1	0.268870
chrX	100969708	100990829	100980268	ENSG00000174225.14	+	protein_coding	KNOWN	ARL13A	4	9	0.162098
chrX	101009346	101052116	101030731	ENSG00000188917.14	-	protein_coding	KNOWN	TRMT2B	6	14	0.340753
chrX	101043564	101094476	101069020	ENSG00000225839.2	-	sense_overlapping	KNOWN	TRMT2B-AS1	1	2	0.655393
chrX	101078720	101096364	101087542	ENSG00000126950.7	+	protein_coding	KNOWN	TMEM35	2	2	0.693795
chrX	101098218	101163681	101130949	ENSG00000102384.13	+	protein_coding	KNOWN	CENPI	5	21	0.320219
chrX	101191115	101191409	101191262	ENSG00000231643.4	-	processed_pseudogene	KNOWN	GHc-210E9.2	1	1	0.106639
chrX	101219769	101264497	101242133	ENSG00000102385.12	+	protein_coding	KNOWN	DRP2	5	24	0.291792
chrX	101268253	101293057	101280655	ENSG00000102387.15	-	protein_coding	KNOWN	TAF7L	3	13	0.225715
chrX	101325404	101325510	101325457	ENSG00000202024.1	+	snRNA	KNOWN	RNU6-934P	1	1	-0.185993
chrX	101337725	101338289	101338007	ENSG00000270813.2	-	processed_pseudogene	KNOWN	NANOGNBP3	1	1	0.421697
chrX	101339917	101340934	101340425	ENSG00000183911.7	+	processed_pseudogene	KNOWN	RPL21P132	1	3	0.421697
chrX	101345661	101349196	101347428	ENSG00000126953.5	-	protein_coding	KNOWN	TIMM8A	2	2	0.421697
chrX	101349447	101390796	101370121	ENSG00000010671.15	-	protein_coding	KNOWN	BTK	10	19	-0.073019
chrX	101390824	101396154	101393489	ENSG00000241343.9	+	protein_coding	KNOWN	RPL36A	10	6	0.076224
chrX	101391011	101412297	101401654	ENSG00000257529.5	+	protein_coding	KNOWN	RPL36A-HNRNPH2	2	5	0.100416
chrX	101397803	101407925	101402864	ENSG00000102393.9	-	protein_coding	KNOWN	GLA	7	8	0.076224
chrX	101408295	101414133	101411214	ENSG00000126945.8	+	protein_coding	KNOWN	HNRNPH2	1	2	0.234903
chrX	101418287	101533459	101475873	ENSG00000196440.11	+	protein_coding	KNOWN	ARMCX4	10	16	0.273595
chrX	101427393	101427495	101427444	ENSG00000221132.1	-	miRNA	NOVEL	AL035422.1	1	1	0.300309
chrX	101443707	101444103	101443905	ENSG00000234557.2	-	processed_pseudogene	KNOWN	RP1-164F3.8	1	1	0.395384
chrX	101537485	101539276	101538380	ENSG00000237682.2	-	processed_pseudogene	KNOWN	RP3-514P16.1	1	1	-0.605081
chrX	101550531	101554700	101552615	ENSG00000126947.11	+	protein_coding	KNOWN	ARMCX1	2	5	-0.032336
chrX	101597510	101598671	101598090	ENSG00000204072.3	+	transcribed_unprocessed_pseudogene	KNOWN	ARMCX7P	2	1	0.179455
chrX	101615118	101618001	101616559	ENSG00000198960.10	-	protein_coding	KNOWN	ARMCX6	8	5	0.551423
chrX	101622797	101627843	101625320	ENSG00000102401.19	+	protein_coding	KNOWN	ARMCX3	7	5	0.551423
chrX	101622983	101624164	101623573	ENSG00000228275.1	-	antisense	KNOWN	ARMCX3-AS1	1	2	0.551423
chrX	101624057	101624157	101624107	ENSG00000278203.1	+	miRNA	NOVEL	AC234775.1	1	1	0.551423
chrX	101627868	101628523	101628195	ENSG00000261101.2	+	sense_overlapping	KNOWN	RP4-545K15.5	1	1	0.551423
chrX	101634006	101634112	101634059	ENSG00000207291.1	-	snRNA	KNOWN	RNU6-30P	1	1	0.217523
chrX	101655281	101659891	101657586	ENSG00000184867.13	-	protein_coding	KNOWN	ARMCX2	13	6	0.208805
chrX	101683780	101684449	101684114	ENSG00000223753.2	+	processed_pseudogene	KNOWN	GHc-602D8.2	1	1	-0.004870
chrX	101691580	101691685	101691632	ENSG00000212584.1	+	snRNA	KNOWN	RNU6-587P	1	1	-0.041275
chrX	101720340	101721709	101721024	ENSG00000229090.2	-	processed_pseudogene	KNOWN	RP1-232L22__A.1	1	1	-0.368982
chrX	101778969	101780538	101779753	ENSG00000178146.9	-	processed_pseudogene	KNOWN	RP1-232L22__B.1	1	1	0.048923
chrX	101832112	101857577	101844844	ENSG00000126952.16	-	protein_coding	KNOWN	NXF5	7	19	-0.017404
chrX	101882288	101932031	101907159	ENSG00000166432.14	-	protein_coding	KNOWN	ZMAT1	6	10	-0.283345
chrX	101911529	101912072	101911800	ENSG00000235196.3	+	processed_pseudogene	KNOWN	RP1-3E10.2	1	1	-0.188116
chrX	101915589	101915695	101915642	ENSG00000252810.1	+	snRNA	KNOWN	RNU6-345P	1	1	-0.188116
chrX	101989481	101989872	101989676	ENSG00000235976.2	-	processed_pseudogene	KNOWN	RP1-197J16.1	1	1	-0.031744
chrX	102006883	102007294	102007088	ENSG00000226119.1	+	processed_pseudogene	KNOWN	RP1-197J16.2	1	1	-0.290728
chrX	102008524	102009046	102008785	ENSG00000234901.1	-	processed_pseudogene	KNOWN	MTND6P13	1	1	-0.290728
chrX	102125688	102127711	102126699	ENSG00000184905.8	+	protein_coding	KNOWN	TCEAL2	3	3	0.111101
chrX	102140476	102142970	102141723	ENSG00000204071.9	-	protein_coding	KNOWN	TCEAL6	3	4	-0.067486
chrX	102153708	102156057	102154882	ENSG00000184515.10	-	protein_coding	KNOWN	BEX5	3	3	-0.263489
chrX	102173100	102185021	102179060	ENSG00000251525.6	+	transcribed_unprocessed_pseudogene	KNOWN	TCP11X3P	2	7	-0.008702
chrX	102215301	102229532	102222416	ENSG00000268235.6	+	transcribed_unprocessed_pseudogene	KNOWN	TCP11X1	3	11	-0.111100
chrX	102247161	102326719	102286940	ENSG00000269405.6	+	protein_coding	KNOWN	NXF2	2	23	-0.096121
chrX	102259043	102261692	102260367	ENSG00000273746.1	+	unprocessed_pseudogene	KNOWN	GHc-1077H7.2	1	3	-0.340968
chrX	102360395	102463274	102411834	ENSG00000269437.6	-	protein_coding	KNOWN	NXF2B	5	27	-0.092338
chrX	102374628	102471812	102423220	ENSG00000215029.8	-	protein_coding	KNOWN	TCP11X2	3	14	-0.134349
chrX	102425428	102428074	102426751	ENSG00000231590.1	-	unitary_pseudogene	KNOWN	RP11-353J17.3	1	3	-0.260889
chrX	102513676	102516784	102515230	ENSG00000158164.6	-	protein_coding	KNOWN	TMSB15A	1	3	0.127181
chrX	102546734	102548213	102547473	ENSG00000176318.8	-	processed_pseudogene	KNOWN	FOXN3P1	1	1	-0.507046
chrX	102549965	102571695	102560830	ENSG00000196970.8	+	transcribed_unprocessed_pseudogene	KNOWN	NXF4	2	18	-0.131804
chrX	102599168	102604159	102601663	ENSG00000125962.14	+	protein_coding	KNOWN	ARMCX5	6	6	0.054024
chrX	102599512	102714671	102657091	ENSG00000271147.7	+	processed_transcript	KNOWN	ARMCX5-GPRASP2	9	7	0.201453
chrX	102599657	102659712	102629684	ENSG00000270050.1	-	antisense	KNOWN	RP4-769N13.7	1	3	0.381203
chrX	102615473	102615820	102615646	ENSG00000227211.2	-	processed_pseudogene	KNOWN	RP5-1100E15.4	1	1	0.574774
chrX	102651366	102659083	102655224	ENSG00000198932.12	+	protein_coding	KNOWN	GPRASP1	5	6	0.162381
chrX	102678707	102678813	102678760	ENSG00000252294.1	-	snRNA	KNOWN	RNU6-589P	1	1	-0.383346
chrX	102705784	102706240	102706012	ENSG00000230320.1	+	processed_pseudogene	KNOWN	BEND7P1	1	1	0.265640
chrX	102712176	102717733	102714954	ENSG00000158301.18	+	protein_coding	KNOWN	GPRASP2	5	5	0.210173
chrX	102720688	102753540	102737114	ENSG00000198908.11	+	protein_coding	KNOWN	BHLHB9	7	4	0.338476
chrX	102769161	102885406	102827283	ENSG00000223546.6	+	lincRNA	KNOWN	LINC00630	5	8	0.080428
chrX	102785667	102786604	102786135	ENSG00000232282.1	+	processed_pseudogene	KNOWN	MTND1P32	1	1	0.284637
chrX	102786813	102788387	102787600	ENSG00000229954.1	+	processed_pseudogene	KNOWN	MTND2P2	1	2	0.284637
chrX	102796251	102797093	102796672	ENSG00000237300.2	+	processed_pseudogene	KNOWN	MTCO1P19	1	2	0.031871
chrX	102797531	102798128	102797829	ENSG00000237628.2	+	processed_pseudogene	KNOWN	MTCO2P19	1	1	0.031871
chrX	102798396	102799560	102798978	ENSG00000228316.1	+	processed_pseudogene	KNOWN	RP11-522L3.5	1	2	0.031871
chrX	102799563	102799883	102799723	ENSG00000224471.2	+	processed_pseudogene	KNOWN	MTCO3P19	1	1	0.031871
chrX	102799942	102801399	102800670	ENSG00000226056.1	+	processed_pseudogene	KNOWN	MTND4P32	1	2	0.031871
chrX	102803041	102806138	102804589	ENSG00000234886.1	+	processed_pseudogene	KNOWN	MTND5P26	1	2	0.031871
chrX	102806164	102806646	102806405	ENSG00000227649.1	-	processed_pseudogene	KNOWN	RP11-522L3.9	1	1	0.031871
chrX	102806741	102807824	102807282	ENSG00000229794.2	+	processed_pseudogene	KNOWN	RP11-522L3.11	1	1	0.031871
chrX	102884414	102906158	102895286	ENSG00000239407.5	+	lincRNA	KNOWN	LL0XNC01-237H1.2	2	6	-0.181016
chrX	102937250	102938962	102938106	ENSG00000102128.7	+	protein_coding	KNOWN	RAB40AL	1	1	0.024878
chrX	102937770	102940561	102939165	ENSG00000234050.1	-	antisense	KNOWN	LL0XNC01-237H1.3	1	2	0.024878
chrX	103007461	103008072	103007766	ENSG00000224632.1	+	processed_pseudogene	KNOWN	LL0XNC01-73E8.1	1	1	0.303496
chrX	103062651	103064240	103063445	ENSG00000133169.5	-	protein_coding	KNOWN	BEX1	1	3	-0.122747
chrX	103068865	103068986	103068925	ENSG00000221010.2	-	miRNA	NOVEL	AL008708.1	1	1	-0.122747
chrX	103075810	103093125	103084467	ENSG00000147206.16	-	protein_coding	KNOWN	NXF3	7	20	0.144566
chrX	103087198	103089277	103088237	ENSG00000226241.2	+	processed_pseudogene	KNOWN	LL0XNC01-221F2.2	1	1	0.162381
chrX	103206010	103206899	103206454	ENSG00000233071.3	-	processed_pseudogene	KNOWN	RPSAP59	1	1	0.056802
chrX	103215092	103217246	103216169	ENSG00000102409.9	+	protein_coding	KNOWN	BEX4	2	3	-0.264152
chrX	103252995	103255203	103254099	ENSG00000180964.16	-	protein_coding	KNOWN	TCEAL8	3	4	0.474712
chrX	103258572	103259581	103259076	ENSG00000224692.1	-	processed_pseudogene	KNOWN	LL0XNC01-177E8.2	1	2	0.474712
chrX	103273691	103276872	103275281	ENSG00000204065.2	-	protein_coding	KNOWN	TCEAL5	1	3	-0.263103
chrX	103309346	103311046	103310196	ENSG00000133134.11	-	protein_coding	KNOWN	BEX2	4	3	-0.007420
chrX	103330196	103332326	103331261	ENSG00000182916.7	+	protein_coding	KNOWN	TCEAL7	2	3	0.111357
chrX	103347462	103347729	103347595	ENSG00000238049.2	-	processed_pseudogene	KNOWN	LL0XNC01-105G4.3	1	1	0.111357
chrX	103356445	103358469	103357457	ENSG00000185222.7	+	protein_coding	KNOWN	WBP5	2	3	0.202416
chrX	103376340	103378077	103377208	ENSG00000166681.13	+	protein_coding	KNOWN	NGFRAP1	4	3	0.207469
chrX	103404777	103408299	103406538	ENSG00000281091.2	+	lincRNA	KNOWN	RP13-349O20.2	3	2	0.301445
chrX	103497523	103500317	103498920	ENSG00000234405.1	+	antisense	KNOWN	LL0XNC01-250H12.3	1	2	0.266490
chrX	103499750	103519489	103509619	ENSG00000172476.3	-	protein_coding	KNOWN	RAB40A	2	3	0.478589
chrX	103576231	103587736	103581983	ENSG00000133142.17	+	protein_coding	KNOWN	TCEAL4	13	5	-0.371409
chrX	103596608	103598904	103597756	ENSG00000279894.1	+	TEC	KNOWN	GHc-857G6.7	1	1	0.531524
chrX	103607451	103629690	103618570	ENSG00000196507.10	+	protein_coding	KNOWN	TCEAL3	4	7	0.173893
chrX	103626076	103626492	103626284	ENSG00000224031.1	-	antisense	KNOWN	TCEAL3-AS1	1	2	0.127616
chrX	103628704	103630953	103629828	ENSG00000172465.13	+	protein_coding	KNOWN	TCEAL1	4	3	0.285224
chrX	103651735	103652106	103651920	ENSG00000180284.5	-	processed_pseudogene	KNOWN	RP5-1055C14.6	1	1	0.288389
chrX	103675496	103688158	103681827	ENSG00000123562.16	-	protein_coding	KNOWN	MORF4L2	15	5	0.200926
chrX	103687284	103691772	103689528	ENSG00000231154.1	+	antisense	KNOWN	MORF4L2-AS1	1	3	0.347647
chrX	103707224	103728655	103717939	ENSG00000188828.11	-	protein_coding	KNOWN	GLRA4	4	9	0.734608
chrX	103710909	103714028	103712468	ENSG00000179363.6	+	protein_coding	KNOWN	TMEM31	1	3	0.758748
chrX	103773718	103792619	103783168	ENSG00000123560.13	+	protein_coding	KNOWN	PLP1	23	8	0.561692
chrX	103810384	103810508	103810446	ENSG00000221392.1	+	miRNA	NOVEL	Z73964.1	1	1	0.208805
chrX	103822322	103832228	103827275	ENSG00000123570.3	-	protein_coding	KNOWN	RAB9B	1	3	0.182520
chrX	103850797	103850911	103850854	ENSG00000222419.1	-	rRNA	KNOWN	RNA5SP511	1	1	-0.273005
chrX	103904322	103904754	103904538	ENSG00000231787.4	-	processed_pseudogene	KNOWN	RP11-370B6.1	1	1	-0.327233
chrX	103909126	103909449	103909287	ENSG00000276298.1	+	unprocessed_pseudogene	KNOWN	LL0XNC01-116E7.5	1	1	-0.327233
chrX	103910305	103911352	103910828	ENSG00000234345.2	-	processed_pseudogene	KNOWN	LL0XNC01-116E7.1	1	1	0.300578
chrX	103917411	103919548	103918479	ENSG00000231728.3	-	antisense	KNOWN	LL0XNC01-116E7.2	2	4	0.300578
chrX	103918896	103966712	103942804	ENSG00000158427.14	+	protein_coding	KNOWN	TMSB15B	6	4	-0.034121
chrX	103928099	103929017	103928558	ENSG00000230312.2	+	processed_pseudogene	KNOWN	LL0XNC01-116E7.4	1	1	0.300578
chrX	103961811	103962279	103962045	ENSG00000227067.3	-	processed_pseudogene	KNOWN	DPPA3P1	1	1	-0.225490
chrX	104011147	104013687	104012417	ENSG00000123569.8	-	protein_coding	KNOWN	H2BFWT	2	3	-0.033539
chrX	104039949	104042454	104041201	ENSG00000101812.12	+	protein_coding	KNOWN	H2BFM	3	3	-0.019040
chrX	104062542	104063037	104062789	ENSG00000235946.1	-	processed_pseudogene	KNOWN	LL0XNC01-240C2.1	1	1	0.106206
chrX	104063871	104076212	104070041	ENSG00000269226.7	-	protein_coding	KNOWN	RP11-722G7.1	2	3	0.069798
chrX	104099214	104157027	104128120	ENSG00000269743.2	-	protein_coding	KNOWN	SLC25A53	2	2	0.385280
chrX	104112131	104115846	104113988	ENSG00000166707.10	+	protein_coding	KNOWN	ZCCHC18	6	4	0.440999
chrX	104166620	104195902	104181261	ENSG00000123575.8	+	protein_coding	KNOWN	FAM199X	2	6	0.219239
chrX	104250038	104254933	104252485	ENSG00000123576.5	-	protein_coding	KNOWN	ESX1	1	4	-0.210037
chrX	104566315	105767829	105167072	ENSG00000189108.12	+	protein_coding	KNOWN	IL1RAPL2	3	11	-0.268870
chrX	104647216	104647999	104647607	ENSG00000232665.2	-	processed_pseudogene	KNOWN	PHBP10	1	1	-0.029024
chrX	104803915	104804440	104804177	ENSG00000223733.1	+	processed_pseudogene	KNOWN	RPL18AP14	1	1	-0.082506
chrX	105218929	105220674	105219801	ENSG00000268629.6	-	protein_coding	KNOWN	TEX13A	2	3	-0.197515
chrX	105405647	105407039	105406343	ENSG00000181819.14	+	processed_pseudogene	KNOWN	KCTD9P2	1	4	-0.206090
chrX	105676071	105676177	105676124	ENSG00000206864.1	-	snRNA	KNOWN	RNU6-207P	1	1	-0.847887
chrX	105822543	105958610	105890576	ENSG00000123572.16	+	protein_coding	KNOWN	NRK	4	29	-0.275578
chrX	105860689	105860762	105860725	ENSG00000222161.1	+	miRNA	NOVEL	Z97356.1	1	1	-0.254184
chrX	106032442	106038738	106035590	ENSG00000123561.14	-	protein_coding	KNOWN	SERPINA7	3	5	-0.314328
chrX	106070481	106073202	106071841	ENSG00000230788.2	+	processed_pseudogene	KNOWN	RP11-560L11.1	1	2	-0.161127
chrX	106168305	106208956	106188630	ENSG00000157502.12	+	protein_coding	KNOWN	MUM1L1	4	6	-0.175433
chrX	106327534	106327824	106327679	ENSG00000256709.2	+	processed_pseudogene	KNOWN	RP1-19N1.1	1	1	-0.350013
chrX	106426568	106426669	106426618	ENSG00000202407.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.413244
chrX	106466542	106467440	106466991	ENSG00000224816.1	-	processed_pseudogene	KNOWN	NAP1L4P2	1	1	0.003183
chrX	106562774	106563404	106563089	ENSG00000227657.1	-	unprocessed_pseudogene	KNOWN	SERPINA7P1	1	1	-0.446874
chrX	106566021	106566161	106566091	ENSG00000277673.1	+	unprocessed_pseudogene	KNOWN	RP13-483F6.2	1	1	-0.446874
chrX	106611930	106679442	106645686	ENSG00000147231.13	+	protein_coding	KNOWN	CXorf57	6	14	-0.508744
chrX	106639814	106639896	106639855	ENSG00000263515.1	+	miRNA	KNOWN	MIR548AN	1	1	-0.767831
chrX	106693794	106796993	106745393	ENSG00000133135.13	+	protein_coding	KNOWN	RNF128	3	7	-0.299587
chrX	106802680	106876145	106839412	ENSG00000133138.19	+	protein_coding	KNOWN	TBC1D8B	7	21	-0.217043
chrX	106813871	107000244	106907057	ENSG00000133131.14	-	protein_coding	KNOWN	MORC4	4	17	0.128286
chrX	106900063	106903335	106901699	ENSG00000147223.5	-	protein_coding	KNOWN	RIPPLY1	2	4	0.317284
chrX	106900164	106930861	106915512	ENSG00000165376.10	+	protein_coding	KNOWN	CLDN2	3	2	0.480470
chrX	107032248	107032820	107032534	ENSG00000231144.1	+	processed_pseudogene	KNOWN	EEF1A1P40	1	1	0.026403
chrX	107064420	107118823	107091621	ENSG00000089682.16	-	protein_coding	KNOWN	RBM41	8	8	-0.353569
chrX	107123427	107206433	107164930	ENSG00000198088.10	-	protein_coding	KNOWN	NUP62CL	4	9	-0.341203
chrX	107131659	107132269	107131964	ENSG00000213569.4	+	processed_pseudogene	KNOWN	RP13-383K5.4	1	1	-0.051372
chrX	107202577	107202683	107202630	ENSG00000199832.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.112022
chrX	107206632	107244243	107225437	ENSG00000080572.12	+	protein_coding	KNOWN	PIH1D3	3	8	-0.218886
chrX	107272582	107273656	107273119	ENSG00000204053.6	+	processed_pseudogene	KNOWN	MYCLP1	1	1	-0.221166
chrX	107351650	107352843	107352246	ENSG00000215007.3	-	processed_pseudogene	KNOWN	DNAJA1P3	1	1	-0.233778
chrX	107428630	107429461	107429045	ENSG00000214720.4	+	processed_pseudogene	KNOWN	KRT18P49	1	1	-0.062042
chrX	107428989	107429079	107429034	ENSG00000207846.1	+	miRNA	NOVEL	AL035088.1	1	1	-0.062042
chrX	107512983	107545821	107529402	ENSG00000227610.1	-	antisense	KNOWN	FRMPD3-AS1	1	2	0.232206
chrX	107522450	107605251	107563850	ENSG00000147234.10	+	protein_coding	KNOWN	FRMPD3	3	16	0.187403
chrX	107628424	107651026	107639725	ENSG00000147224.10	+	protein_coding	KNOWN	PRPS1	4	7	0.583242
chrX	107698516	107698603	107698559	ENSG00000280469.1	-	miRNA	NOVEL	AL772400.1	1	1	0.271813
chrX	107713221	107777342	107745281	ENSG00000157514.16	-	protein_coding	KNOWN	TSC22D3	17	4	0.456141
chrX	107777733	107794682	107786207	ENSG00000170935.6	+	protein_coding	KNOWN	NCBP2L	1	2	0.078479
chrX	107825755	107927193	107876474	ENSG00000080561.13	+	protein_coding	KNOWN	MID2	4	10	0.187203
chrX	107894597	107935980	107915288	ENSG00000236064.1	-	antisense	KNOWN	RP6-191P20.4	1	4	0.066939
chrX	107901145	107901246	107901195	ENSG00000207363.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.370293
chrX	107939263	107939642	107939452	ENSG00000225728.2	-	processed_pseudogene	KNOWN	RP6-191P20.3	1	1	-0.115813
chrX	107974078	107985008	107979543	ENSG00000277883.1	+	unprocessed_pseudogene	KNOWN	NLRP3P	1	3	0.073844
chrX	107980864	107982370	107981617	ENSG00000170925.3	-	protein_coding	KNOWN	TEX13B	1	3	0.073844
chrX	108044970	108079184	108062077	ENSG00000101842.13	+	protein_coding	KNOWN	VSIG1	5	8	-0.365862
chrX	108084207	108091618	108087912	ENSG00000101843.18	-	protein_coding	KNOWN	PSMD10	7	6	-0.250059
chrX	108091668	108154671	108123169	ENSG00000101844.17	+	protein_coding	KNOWN	ATG4A	8	14	0.047993
chrX	108155607	108439497	108297552	ENSG00000197565.15	-	protein_coding	KNOWN	COL4A6	10	46	-0.136926
chrX	108383398	108383993	108383695	ENSG00000189372.4	+	unprocessed_pseudogene	KNOWN	RP6-149D17.1	1	2	0.004529
chrX	108439844	108697545	108568694	ENSG00000188153.12	+	protein_coding	KNOWN	COL4A5	10	53	-0.417739
chrX	108676951	108677057	108677004	ENSG00000207146.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.685616
chrX	108719949	108724944	108722446	ENSG00000261409.1	-	sense_overlapping	KNOWN	RP6-24A23.7	1	1	-0.273005
chrX	108722070	108732687	108727378	ENSG00000260548.1	-	protein_coding	KNOWN	RP6-24A23.6	1	2	-0.191339
chrX	108725886	108726948	108726417	ENSG00000280322.1	-	TEC	KNOWN	RP6-24A23.8	1	1	-0.273005
chrX	108732482	108736409	108734445	ENSG00000133124.11	-	protein_coding	KNOWN	IRS4	1	1	0.049557
chrX	108736011	108738903	108737457	ENSG00000237863.2	+	antisense	KNOWN	RP6-24A23.3	2	3	0.049557
chrX	108826764	108826869	108826816	ENSG00000201443.1	+	snRNA	KNOWN	RNU6-309P	1	1	-0.255932
chrX	109054542	109054590	109054566	ENSG00000275110.1	+	miRNA	KNOWN	MIR6087	1	1	-0.260889
chrX	109341813	109342697	109342255	ENSG00000215000.4	+	processed_pseudogene	KNOWN	RP1-31B8.1	1	1	-0.216958
chrX	109372906	109482072	109427489	ENSG00000101890.4	-	protein_coding	KNOWN	GUCY2F	1	20	-0.274956
chrX	109535781	109544690	109540235	ENSG00000101888.11	+	protein_coding	KNOWN	NXT2	4	5	-0.045512
chrX	109568478	109570289	109569383	ENSG00000233874.2	+	processed_pseudogene	KNOWN	RP1-136J15.5	1	1	0.098088
chrX	109623700	109625172	109624436	ENSG00000176076.7	-	protein_coding	KNOWN	KCNE5	1	1	0.029931
chrX	109624244	109733403	109678823	ENSG00000068366.19	-	protein_coding	KNOWN	ACSL4	12	17	-0.160155
chrX	109636834	109637063	109636948	ENSG00000237319.1	+	processed_pseudogene	KNOWN	RP1-136J15.1	1	1	-0.303146
chrX	109659904	109659968	109659936	ENSG00000280934.1	-	miRNA	NOVEL	AL118496.1	1	1	-0.171043
chrX	109744643	109744749	109744696	ENSG00000252069.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.054229
chrX	109853312	109853919	109853615	ENSG00000225381.2	+	processed_pseudogene	KNOWN	RPS5P7	1	1	-0.147835
chrX	110002631	110182734	110092682	ENSG00000157600.11	+	protein_coding	KNOWN	TMEM164	8	7	0.263351
chrX	110055319	110055427	110055373	ENSG00000208013.2	+	miRNA	KNOWN	MIR652	1	1	0.110139
chrX	110082118	110082218	110082168	ENSG00000265584.1	+	miRNA	KNOWN	MIR3978	1	1	0.221760
chrX	110194186	110440233	110317209	ENSG00000101935.9	-	protein_coding	KNOWN	AMMECR1	5	8	0.079779
chrX	110224985	110225063	110225024	ENSG00000208883.1	-	snoRNA	KNOWN	SNORD96B	1	1	0.052998
chrX	110248911	110249004	110248957	ENSG00000281776.1	+	miRNA	NOVEL	AL079334.1	1	1	-0.084886
chrX	110305420	110307221	110306320	ENSG00000224142.1	-	sense_intronic	KNOWN	AMMECR1-IT1	1	2	0.512567
chrX	110346703	110346909	110346806	ENSG00000133136.4	-	processed_pseudogene	KNOWN	GNG5P2	1	1	0.091992
chrX	110358816	110456334	110407575	ENSG00000243978.8	+	protein_coding	KNOWN	RGAG1	3	4	-0.000396
chrX	110520312	110523021	110521666	ENSG00000225366.4	+	transcribed_processed_pseudogene	KNOWN	TDGF1P3	2	1	-0.273293
chrX	110636841	110637672	110637256	ENSG00000228042.2	+	processed_pseudogene	KNOWN	RP11-441A11.1	1	1	-0.286520
chrX	110673856	110795819	110734837	ENSG00000101938.14	-	protein_coding	KNOWN	CHRDL1	5	12	0.042564
chrX	110944285	111227361	111085823	ENSG00000077264.14	+	protein_coding	KNOWN	PAK3	13	19	-0.250536
chrX	111169221	111169403	111169312	ENSG00000226112.1	+	processed_pseudogene	KNOWN	FCF1P4	1	1	-0.286520
chrX	111229889	111231061	111230475	ENSG00000234349.1	-	processed_pseudogene	KNOWN	GLUD1P9	1	1	-0.271697
chrX	111245103	111270523	111257813	ENSG00000077274.8	-	protein_coding	KNOWN	CAPN6	1	13	-0.335767
chrX	111293780	111412375	111353077	ENSG00000077279.16	-	protein_coding	KNOWN	DCX	7	8	-0.176217
chrX	111421510	111421608	111421559	ENSG00000251954.1	-	snRNA	KNOWN	RNU6-496P	1	1	-0.115813
chrX	111434427	111435024	111434725	ENSG00000223904.2	+	processed_pseudogene	KNOWN	HMGB1P12	1	1	-0.450158
chrX	111511662	111522399	111517030	ENSG00000260802.1	+	lincRNA	KNOWN	LINC00890	2	3	-0.329472
chrX	111618808	111619094	111618951	ENSG00000229939.1	+	processed_pseudogene	KNOWN	RP11-111F16.2	1	1	-0.234509
chrX	111619677	111621489	111620583	ENSG00000225031.1	-	processed_pseudogene	KNOWN	EIF4BP7	1	1	-0.234509
chrX	111624210	111624726	111624468	ENSG00000236189.2	-	processed_pseudogene	KNOWN	RPL18AP15	1	1	-0.234509
chrX	111665811	111760649	111713230	ENSG00000101901.10	+	protein_coding	KNOWN	ALG13	35	27	-0.250570
chrX	111669829	111669948	111669888	ENSG00000201420.1	-	rRNA	KNOWN	RNA5SP512	1	1	-0.350526
chrX	111706649	111711101	111708875	ENSG00000229487.1	-	antisense	KNOWN	ALG13-AS1	1	2	-0.226889
chrX	111774315	112082776	111928545	ENSG00000072315.3	-	protein_coding	KNOWN	TRPC5	1	11	-0.164952
chrX	111876051	111903990	111890020	ENSG00000204025.6	+	antisense	KNOWN	TRPC5OS	2	4	-0.040518
chrX	111930735	111931092	111930913	ENSG00000271421.1	+	processed_pseudogene	KNOWN	RP1-269O5.3	1	1	-0.414968
chrX	112259493	112259574	112259533	ENSG00000265858.1	-	miRNA	NOVEL	AL031176.1	1	1	-0.665807
chrX	112319952	112320417	112320184	ENSG00000271464.1	-	processed_pseudogene	KNOWN	DPRXP7	1	1	-0.500584
chrX	112381392	112382220	112381806	ENSG00000271400.1	+	processed_pseudogene	KNOWN	RP13-266I11.1	1	1	-0.485775
chrX	112454500	112457112	112455806	ENSG00000187823.3	+	protein_coding	KNOWN	ZCCHC16	1	1	-0.150369
chrX	112486059	112486127	112486093	ENSG00000281109.1	-	miRNA	NOVEL	BX088563.1	1	1	-0.221669
chrX	112630648	112680054	112655351	ENSG00000182508.13	-	protein_coding	KNOWN	LHFPL1	2	4	0.091316
chrX	112661657	112661768	112661712	ENSG00000200436.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.036742
chrX	112689915	112690520	112690217	ENSG00000213652.3	+	processed_pseudogene	KNOWN	HMGB3P30	1	1	-0.032631
chrX	112774503	112840815	112807659	ENSG00000126016.13	-	protein_coding	KNOWN	AMOT	6	12	-0.081338
chrX	112780718	112780788	112780753	ENSG00000263351.1	-	miRNA	KNOWN	MIR4329	1	1	-0.008702
chrX	112855874	112856162	112856018	ENSG00000243011.3	+	misc_RNA	KNOWN	RN7SL266P	1	1	-0.390950
chrX	112919132	112919230	112919181	ENSG00000252930.1	+	snRNA	KNOWN	RNU6-1015P	1	1	-0.107946
chrX	112978229	112978318	112978273	ENSG00000277832.1	-	miRNA	NOVEL	AC002072.1	1	1	-0.160395
chrX	113024429	113024506	113024467	ENSG00000221175.2	-	miRNA	NOVEL	AL023876.1	1	1	-0.275217
chrX	113347413	113347619	113347516	ENSG00000235329.2	+	processed_pseudogene	KNOWN	RP5-1168A5.1	1	1	-0.149016
chrX	113522482	113522989	113522735	ENSG00000220541.4	+	processed_pseudogene	KNOWN	RP5-1170D6.1	1	1	-0.238157
chrX	113616300	113938218	113777259	ENSG00000241743.2	-	lincRNA	KNOWN	XACT	1	3	-0.407782
chrX	113882590	113883667	113883128	ENSG00000270524.1	+	processed_pseudogene	KNOWN	QTRT1P1	1	1	-0.120553
chrX	113944186	113944399	113944292	ENSG00000201674.2	-	snoRNA	NOVEL	U3	1	1	-0.436702
chrX	113949917	113950082	113949999	ENSG00000207220.1	+	snRNA	KNOWN	RNU1-57P	1	1	-0.278464
chrX	113976341	113976633	113976487	ENSG00000240327.3	-	misc_RNA	KNOWN	RN7SL93P	1	1	-0.608448
chrX	114017033	114017102	114017067	ENSG00000212611.1	+	snoRNA	NOVEL	SNORD30	1	1	-0.574584
chrX	114388988	114389155	114389071	ENSG00000230502.1	-	processed_pseudogene	KNOWN	CTD-2230M5.1	1	1	-1.124326
chrX	114389135	114389954	114389544	ENSG00000271686.1	+	processed_pseudogene	KNOWN	CTD-2230M5.3	1	1	-1.124326
chrX	114390674	114391256	114390965	ENSG00000226547.2	+	processed_pseudogene	KNOWN	SSU72P1	1	1	-0.178097
chrX	114584078	114910061	114747069	ENSG00000147246.9	+	protein_coding	KNOWN	HTR2C	3	7	-0.410916
chrX	114589620	114589935	114589777	ENSG00000224664.2	+	processed_pseudogene	KNOWN	RPL36AP53	1	1	-0.532499
chrX	114630797	114630924	114630860	ENSG00000208839.1	+	snoRNA	KNOWN	SNORA35	1	1	-0.438523
chrX	114636260	114636366	114636313	ENSG00000263653.1	+	miRNA	NOVEL	AC233299.1	1	1	-0.438523
chrX	114639435	114639519	114639477	ENSG00000212100.2	+	miRNA	KNOWN	MIR764	1	1	-0.438523
chrX	114651544	114651623	114651583	ENSG00000222321.1	+	miRNA	KNOWN	MIR1912	1	1	-0.329835
chrX	114652625	114652736	114652680	ENSG00000276158.1	+	miRNA	NOVEL	AC233299.2	1	1	-0.329835
chrX	114715233	114715344	114715288	ENSG00000221710.1	+	miRNA	KNOWN	MIR1298	1	1	-0.572141
chrX	114763184	114763263	114763223	ENSG00000222715.1	+	miRNA	KNOWN	MIR1911	1	1	-0.562512
chrX	114774828	114776775	114775801	ENSG00000224773.2	-	processed_pseudogene	KNOWN	HSPA8P7	1	1	-0.273293
chrX	114823454	114823564	114823509	ENSG00000199001.1	+	miRNA	KNOWN	MIR448	1	1	-0.288280
chrX	114900359	114900574	114900466	ENSG00000270413.1	-	processed_pseudogene	KNOWN	RP11-810O3.2	1	1	-0.133568
chrX	115003975	115019977	115011976	ENSG00000123496.7	-	protein_coding	KNOWN	IL13RA2	3	11	-0.203718
chrX	115032427	115032533	115032480	ENSG00000222122.1	+	snRNA	KNOWN	RNU6-648P	1	1	0.367626
chrX	115063936	115064794	115064365	ENSG00000238223.1	-	processed_pseudogene	KNOWN	RP6-204F4.2	1	1	0.074070
chrX	115069237	115069846	115069541	ENSG00000236080.2	+	processed_pseudogene	KNOWN	YAP1P2	1	1	0.074070
chrX	115110616	115234072	115172344	ENSG00000130224.14	-	protein_coding	KNOWN	LRCH2	2	21	-0.053738
chrX	115126316	115126444	115126380	ENSG00000271907.1	-	snoRNA	NOVEL	SNORA35	1	1	-0.023485
chrX	115139030	115139123	115139076	ENSG00000212241.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.095094
chrX	115189427	115192868	115191147	ENSG00000175718.9	+	protein_coding	KNOWN	RBMXL3	1	1	0.169897
chrX	115198432	115198749	115198590	ENSG00000235656.1	+	processed_pseudogene	KNOWN	RPL36P18	1	1	0.269530
chrX	115289727	115307556	115298641	ENSG00000102021.10	+	protein_coding	KNOWN	LUZP4	2	4	-0.043917
chrX	115424064	115425600	115424832	ENSG00000274374.1	-	processed_pseudogene	KNOWN	RP5-878I13.1	1	2	0.245797
chrX	115454733	115455194	115454963	ENSG00000271021.1	-	processed_pseudogene	KNOWN	RP5-878I13.2	1	1	-0.179813
chrX	115518182	115562731	115540456	ENSG00000271826.5	-	antisense	KNOWN	PLS3-AS1	2	4	0.105409
chrX	115545637	115545717	115545677	ENSG00000252441.1	+	snoRNA	NOVEL	SNORA64	1	1	0.125939
chrX	115561174	115650861	115606017	ENSG00000102024.17	+	protein_coding	KNOWN	PLS3	10	18	0.168768
chrX	115659713	115660022	115659867	ENSG00000270431.1	+	processed_pseudogene	KNOWN	RP1-241P17.7	1	1	0.466387
chrX	115664895	115666133	115665514	ENSG00000227881.1	+	processed_pseudogene	KNOWN	ASS1P5	1	1	0.466387
chrX	115702811	115704120	115703465	ENSG00000234785.1	+	processed_pseudogene	KNOWN	EEF1GP5	1	1	0.232473
chrX	115703812	115703867	115703839	ENSG00000264759.1	+	miRNA	NOVEL	AC005000.1	1	1	0.232473
chrX	115718942	115719229	115719085	ENSG00000228532.4	-	processed_pseudogene	KNOWN	RP1-241P17.4	1	1	-0.150369
chrX	115840964	115843050	115842007	ENSG00000229335.1	+	antisense	KNOWN	DANT1	2	3	-0.492971
chrX	115917271	115969089	115943180	ENSG00000235244.3	-	lincRNA	KNOWN	DANT2	1	3	0.018896
chrX	115992466	115992773	115992619	ENSG00000266828.2	-	misc_RNA	KNOWN	RN7SL712P	1	1	-0.077933
chrX	116043483	116044418	116043950	ENSG00000231371.1	+	processed_pseudogene	KNOWN	AKR1B1P8	1	1	-0.474355
chrX	116106921	116108430	116107675	ENSG00000234558.1	-	processed_pseudogene	KNOWN	API5P1	1	1	-0.536039
chrX	116170722	116174972	116172847	ENSG00000180772.6	+	protein_coding	KNOWN	AGTR2	1	3	-0.636335
chrX	116400848	116400953	116400900	ENSG00000207033.1	-	snRNA	KNOWN	RNU6-154P	1	1	-0.596064
chrX	116436622	116461458	116449040	ENSG00000268104.2	+	protein_coding	KNOWN	SLC6A14	2	14	-0.601178
chrX	116461682	116463003	116462342	ENSG00000204019.4	-	protein_coding	KNOWN	CT83	1	2	-0.812431
chrX	116669810	116680303	116675056	ENSG00000236077.2	-	unprocessed_pseudogene	KNOWN	RP11-232D9.2	1	7	-0.112062
chrX	116688870	116690185	116689527	ENSG00000237860.1	+	unprocessed_pseudogene	KNOWN	RP11-232D9.4	1	2	-0.150408
chrX	116692910	116694188	116693549	ENSG00000230159.1	-	lincRNA	KNOWN	RP11-232D9.3	1	2	-0.403536
chrX	116748530	116748877	116748703	ENSG00000224217.1	-	processed_pseudogene	KNOWN	RP11-232D9.1	1	1	-0.254659
chrX	116850839	116850945	116850892	ENSG00000206752.1	-	snRNA	KNOWN	RNU6-1323P	1	1	0.155186
chrX	116963049	116963676	116963362	ENSG00000213526.3	+	processed_pseudogene	KNOWN	SETP8	1	1	-0.555706
chrX	117397938	117398206	117398072	ENSG00000238066.1	+	processed_pseudogene	KNOWN	RP3-378P9.1	1	1	-0.020483
chrX	117399452	117400081	117399766	ENSG00000224314.1	+	processed_pseudogene	KNOWN	RP3-378P9.2	1	2	-0.020483
chrX	117894632	117895683	117895157	ENSG00000279587.1	-	TEC	KNOWN	RP1-278D1.2	1	1	-0.612552
chrX	117897813	118117340	118007576	ENSG00000003096.13	-	protein_coding	KNOWN	KLHL13	11	8	-0.351555
chrX	117914244	117914345	117914294	ENSG00000200291.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.483868
chrX	118116179	118116800	118116489	ENSG00000239500.2	-	processed_pseudogene	KNOWN	RP1-169K13.3	1	1	-0.543852
chrX	118128748	118129018	118128883	ENSG00000237458.1	+	processed_pseudogene	KNOWN	TUBB4BP3	1	1	-0.543852
chrX	118146063	118146561	118146312	ENSG00000234524.1	+	processed_pseudogene	KNOWN	RPL12P43	1	1	-0.275217
chrX	118278159	118283367	118280763	ENSG00000270619.1	+	processed_pseudogene	KNOWN	RP11-197B12.1	1	2	-0.644974
chrX	118346073	118449961	118398017	ENSG00000131725.13	+	protein_coding	KNOWN	WDR44	5	20	0.209844
chrX	118386370	118386477	118386423	ENSG00000221463.2	+	miRNA	KNOWN	MIR1277	1	1	0.111891
chrX	118495898	118686163	118591030	ENSG00000147251.15	+	protein_coding	KNOWN	DOCK11	4	53	0.314783
chrX	118569405	118569515	118569460	ENSG00000206862.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.479015
chrX	118632375	118634218	118633296	ENSG00000230399.1	-	processed_pseudogene	KNOWN	RBBP8P1	1	1	-0.058034
chrX	118727572	118794539	118761055	ENSG00000131724.10	+	protein_coding	KNOWN	IL13RA1	3	11	0.136612
chrX	118738055	118738182	118738118	ENSG00000239182.1	+	snoRNA	NOVEL	SNORA35	1	1	0.077778
chrX	118769796	118770857	118770326	ENSG00000250995.1	+	processed_pseudogene	KNOWN	RP13-128O4.3	1	1	0.176567
chrX	118823790	118826968	118825379	ENSG00000174460.3	+	protein_coding	KNOWN	ZCCHC12	1	4	0.123701
chrX	118839554	118919669	118879611	ENSG00000203650.8	+	lincRNA	KNOWN	LINC01285	4	11	0.159315
chrX	118877886	118879185	118878535	ENSG00000224341.1	-	processed_pseudogene	KNOWN	RP4-562J12.1	1	2	0.494090
chrX	118938153	118939134	118938643	ENSG00000231270.1	+	processed_pseudogene	KNOWN	RP13-347D8.1	1	2	-0.188116
chrX	118974614	119018355	118996484	ENSG00000175556.16	+	protein_coding	KNOWN	LONRF3	6	12	-0.067463
chrX	119073226	119076373	119074799	ENSG00000277535.2	+	protein_coding	KNOWN	RP13-347D8.7	1	3	0.091992
chrX	119078635	119150579	119114607	ENSG00000250423.2	-	protein_coding	KNOWN	KIAA1210	1	14	-0.037311
chrX	119186442	119186829	119186635	ENSG00000227864.1	-	processed_pseudogene	KNOWN	ARL5AP1	1	1	0.218904
chrX	119220782	119221742	119221262	ENSG00000230170.1	+	processed_pseudogene	KNOWN	HNRNPA1P28	1	1	-0.122747
chrX	119222564	119223245	119222904	ENSG00000270625.1	-	processed_pseudogene	KNOWN	RP4-555N2.4	1	1	-0.122747
chrX	119236245	119244466	119240355	ENSG00000101856.9	+	protein_coding	KNOWN	PGRMC1	2	3	0.109065
chrX	119249346	119257667	119253506	ENSG00000214992.6	-	unprocessed_pseudogene	KNOWN	AKAP17BP	1	4	-0.036125
chrX	119291529	119335610	119313569	ENSG00000230392.1	+	lincRNA	KNOWN	RP5-1139I1.1	1	4	0.182102
chrX	119356301	119393595	119374948	ENSG00000226661.1	-	antisense	KNOWN	RP5-1139I1.2	1	3	0.113694
chrX	119379712	119380104	119379908	ENSG00000227814.3	+	processed_pseudogene	KNOWN	MRPS17P9	1	1	0.205202
chrX	119399060	119454478	119426769	ENSG00000077713.18	+	protein_coding	KNOWN	SLC25A43	4	6	0.485064
chrX	119422917	119423547	119423232	ENSG00000237903.1	+	sense_intronic	KNOWN	RP3-404F18.5	1	2	0.753995
chrX	119423742	119423905	119423823	ENSG00000207175.1	+	snRNA	KNOWN	RNU1-67P	1	1	0.753995
chrX	119424065	119424116	119424090	ENSG00000264952.1	+	miRNA	NOVEL	AC004000.1	1	1	0.753995
chrX	119434519	119434820	119434669	ENSG00000266420.2	+	misc_RNA	KNOWN	RN7SL118P	1	1	0.419157
chrX	119456558	119456658	119456608	ENSG00000252147.1	+	misc_RNA	KNOWN	RNY3P16	1	1	0.231922
chrX	119466034	119469098	119467566	ENSG00000224281.4	-	processed_transcript	KNOWN	SLC25A5-AS1	4	2	0.231922
chrX	119468400	119471319	119469859	ENSG00000005022.5	+	protein_coding	KNOWN	SLC25A5	4	4	0.343660
chrX	119524455	119524563	119524509	ENSG00000277275.1	+	miRNA	NOVEL	AC004000.2	1	1	0.290321
chrX	119538149	119565408	119551778	ENSG00000018610.13	-	protein_coding	KNOWN	CXorf56	3	7	0.113559
chrX	119574467	119591083	119582775	ENSG00000077721.15	+	protein_coding	KNOWN	UBE2A	11	6	0.714065
chrX	119588337	119605895	119597116	ENSG00000186416.12	-	protein_coding	KNOWN	NKRF	5	4	0.213932
chrX	119615724	119693370	119654547	ENSG00000125354.22	-	protein_coding	KNOWN	SEPT6	9	11	0.628048
chrX	119646743	119646854	119646798	ENSG00000211578.2	-	miRNA	KNOWN	MIR766	1	1	0.593538
chrX	119693568	119696059	119694813	ENSG00000279601.1	+	TEC	KNOWN	CTA-38K21.2	1	1	0.386439
chrX	119758613	119760164	119759388	ENSG00000187808.4	+	protein_coding	KNOWN	SOWAHD	1	1	0.846082
chrX	119786504	119791643	119789073	ENSG00000198918.7	-	protein_coding	KNOWN	RPL39	3	3	0.461839
chrX	119787353	119787484	119787418	ENSG00000206622.1	-	snoRNA	KNOWN	SNORA69	1	1	0.485906
chrX	119807433	119807581	119807507	ENSG00000277555.1	-	unprocessed_pseudogene	KNOWN	UPF3BP4	1	1	0.410674
chrX	119810257	119810359	119810308	ENSG00000273811.1	-	miRNA	NOVEL	AC005052.1	1	1	0.290772
chrX	119815164	119815307	119815235	ENSG00000278244.1	-	unprocessed_pseudogene	KNOWN	UPF3BP3	1	1	0.290772
chrX	119822906	119823043	119822974	ENSG00000278504.1	-	unprocessed_pseudogene	KNOWN	UPF3BP2	1	1	0.290772
chrX	119831616	119831759	119831687	ENSG00000276354.1	-	unprocessed_pseudogene	KNOWN	UPF3BP1	1	1	0.217523
chrX	119834022	119852998	119843510	ENSG00000125351.10	-	protein_coding	KNOWN	UPF3B	4	11	0.237540
chrX	119870475	119871827	119871151	ENSG00000125352.5	-	protein_coding	KNOWN	RNF113A	1	1	0.604640
chrX	119871487	119876662	119874074	ENSG00000125356.6	+	protein_coding	KNOWN	NDUFA1	1	3	0.604640
chrX	119895837	119920716	119908276	ENSG00000186471.12	+	protein_coding	KNOWN	AKAP14	5	7	0.236248
chrX	119920672	119943772	119932222	ENSG00000101882.9	-	protein_coding	KNOWN	NKAP	4	9	0.078942
chrX	119991393	119992543	119991968	ENSG00000282933.1	+	unprocessed_pseudogene	KNOWN	RHOXF1P3	1	2	0.437127
chrX	119998123	119999723	119998923	ENSG00000282850.1	-	unprocessed_pseudogene	KNOWN	RHOXF1P2	1	2	0.437127
chrX	120010718	120015544	120013131	ENSG00000234493.2	-	transcribed_unprocessed_pseudogene	KNOWN	RHOXF1P1	2	4	0.091992
chrX	120036236	120146854	120091545	ENSG00000258545.5	+	antisense	KNOWN	RHOXF1-AS1	3	5	-0.011719
chrX	120070672	120077705	120074188	ENSG00000203989.4	-	protein_coding	KNOWN	RHOXF2B	1	4	-0.091872
chrX	120109053	120115937	120112495	ENSG00000101883.4	-	protein_coding	KNOWN	RHOXF1	1	3	-0.040222
chrX	120117642	120119700	120118671	ENSG00000228139.1	-	lincRNA	KNOWN	LINC01402	1	3	-0.038592
chrX	120120953	120245267	120183110	ENSG00000233382.6	-	transcribed_processed_pseudogene	KNOWN	NKAPP1	5	5	0.139052
chrX	120158561	120165630	120162095	ENSG00000131721.5	+	protein_coding	KNOWN	RHOXF2	1	4	0.236382
chrX	120202061	120202748	120202404	ENSG00000227541.1	-	processed_pseudogene	KNOWN	SFR1P1	1	1	0.487920
chrX	120210461	120212680	120211570	ENSG00000237757.2	-	processed_pseudogene	KNOWN	EEF1A1P30	1	4	-0.181573
chrX	120250752	120258398	120254575	ENSG00000177485.6	+	protein_coding	KNOWN	ZBTB33	2	3	0.037544
chrX	120258650	120311556	120285103	ENSG00000125355.15	-	protein_coding	KNOWN	TMEM255A	6	10	-0.001250
chrX	120273127	120273526	120273326	ENSG00000232042.1	+	processed_pseudogene	KNOWN	RP11-45J1.1	1	1	-0.139955
chrX	120362085	120383249	120372667	ENSG00000101892.11	+	protein_coding	KNOWN	ATP1B4	3	8	0.017729
chrX	120427827	120469365	120448596	ENSG00000005893.15	-	protein_coding	KNOWN	LAMP2	4	9	-0.006139
chrX	120503037	120503096	120503066	ENSG00000251707.2	-	snRNA	KNOWN	RNU7-37P	1	1	0.234011
chrX	120524609	120575794	120550201	ENSG00000158290.16	-	protein_coding	KNOWN	CUL4B	7	22	0.116954
chrX	120594010	120621074	120607542	ENSG00000232119.7	+	protein_coding	KNOWN	MCTS1	7	6	0.118440
chrX	120625793	120630150	120627971	ENSG00000171155.7	-	protein_coding	KNOWN	C1GALT1C1	2	3	0.037490
chrX	120709061	120709392	120709226	ENSG00000278317.1	-	processed_pseudogene	KNOWN	RP4-655L22.5	1	2	0.402921
chrX	120733094	120733396	120733245	ENSG00000181511.5	+	processed_pseudogene	KNOWN	RP4-655L22.4	1	1	0.458419
chrX	120868611	120869807	120869209	ENSG00000237828.1	-	processed_pseudogene	KNOWN	PA2G4P1	1	1	-0.290728
chrX	120872603	120875929	120874266	ENSG00000236446.3	-	protein_coding	KNOWN	CT47B1	1	3	-0.199471
chrX	120876552	120876805	120876678	ENSG00000271346.1	+	processed_pseudogene	KNOWN	RP1-321E8.4	1	1	-0.199471
chrX	120877490	120951744	120914617	ENSG00000230347.4	-	protein_coding	KNOWN	CT47A8	2	3	0.025930
chrX	120877496	120878924	120878210	ENSG00000278646.1	-	protein_coding	KNOWN	RP1-321E8.5	1	2	-0.199471
chrX	120930250	120932301	120931275	ENSG00000226685.4	-	protein_coding	KNOWN	CT47A12	1	2	0.191527
chrX	120932901	120933152	120933026	ENSG00000270678.1	+	processed_pseudogene	KNOWN	RP6-166C19.21	1	1	0.191527
chrX	120933840	120937158	120935499	ENSG00000226929.3	-	protein_coding	KNOWN	CT47A11	1	3	0.191527
chrX	120937762	120938015	120937888	ENSG00000270493.1	+	processed_pseudogene	KNOWN	RP6-166C19.22	1	1	0.191527
chrX	120938701	120942023	120940362	ENSG00000224089.3	-	protein_coding	KNOWN	CT47A10	1	3	0.191527
chrX	120942623	120942875	120942749	ENSG00000271154.1	+	processed_pseudogene	KNOWN	RP6-166C19.23	1	1	0.191527
chrX	120943561	120946883	120945222	ENSG00000226600.3	-	protein_coding	KNOWN	CT47A9	1	3	0.191527
chrX	120947483	120947735	120947609	ENSG00000271041.1	+	processed_pseudogene	KNOWN	RP6-166C19.18	1	1	0.191527
chrX	120952344	120952595	120952469	ENSG00000270397.1	+	processed_pseudogene	KNOWN	RP6-166C19.16	1	1	0.338152
chrX	120953282	120961487	120957384	ENSG00000226023.5	-	protein_coding	KNOWN	CT47A6	2	3	0.338152
chrX	120953288	120956600	120954944	ENSG00000228517.2	-	protein_coding	KNOWN	CT47A7	1	3	0.338152
chrX	120957227	120957479	120957353	ENSG00000271502.1	+	processed_pseudogene	KNOWN	RP6-166C19.17	1	1	0.338152
chrX	120958165	120966348	120962256	ENSG00000237957.5	-	protein_coding	KNOWN	CT47A5	2	3	0.338152
chrX	120962087	120962339	120962213	ENSG00000271211.1	+	processed_pseudogene	KNOWN	RP6-166C19.20	1	1	0.338152
chrX	120966948	120967199	120967073	ENSG00000270736.1	+	processed_pseudogene	KNOWN	RP6-166C19.19	1	1	0.338152
chrX	120967886	120971208	120969547	ENSG00000230594.3	-	protein_coding	KNOWN	CT47A4	1	3	0.568105
chrX	120971808	120972059	120971933	ENSG00000270771.1	+	processed_pseudogene	KNOWN	RP6-166C19.12	1	1	0.970001
chrX	120972746	120976068	120974407	ENSG00000236126.3	-	protein_coding	KNOWN	CT47A3	1	3	0.970001
chrX	120976668	120976919	120976793	ENSG00000270646.1	+	processed_pseudogene	KNOWN	RP6-166C19.15	1	1	0.970001
chrX	120977606	120980928	120979267	ENSG00000242362.2	-	protein_coding	KNOWN	CT47A2	1	3	0.970001
chrX	120981529	120981779	120981654	ENSG00000270456.1	+	processed_pseudogene	KNOWN	RP6-166C19.14	1	1	0.970001
chrX	120982466	120985788	120984127	ENSG00000236371.4	-	protein_coding	KNOWN	CT47A1	1	3	0.970001
chrX	120986388	120986639	120986513	ENSG00000270251.1	+	processed_pseudogene	KNOWN	RP6-166C19.13	1	1	0.970001
chrX	121024964	121026563	121025763	ENSG00000233433.1	-	processed_pseudogene	KNOWN	RP1-296G17.3	1	1	-0.424406
chrX	121047588	121050080	121048834	ENSG00000182890.4	+	protein_coding	KNOWN	GLUD2	1	1	-0.301325
chrX	121203182	121205014	121204098	ENSG00000234176.1	-	processed_pseudogene	KNOWN	HSPA8P1	1	1	-0.477864
chrX	121332554	121332638	121332596	ENSG00000212032.2	-	miRNA	NOVEL	AC007486.1	1	1	0.008334
chrX	121370972	121371053	121371012	ENSG00000265456.1	+	miRNA	KNOWN	MIR3672	1	1	-0.237714
chrX	121863698	121864196	121863947	ENSG00000213498.3	-	processed_pseudogene	KNOWN	TPT1P13	1	1	0.341970
chrX	121868867	121868956	121868911	ENSG00000221217.2	+	miRNA	NOVEL	AL359851.1	1	1	0.341970
chrX	121871869	121876865	121874367	ENSG00000260585.1	+	lincRNA	KNOWN	RP13-192B19.2	1	1	-0.117931
chrX	122010976	122011612	122011294	ENSG00000237891.1	-	processed_pseudogene	KNOWN	RP11-417D4.1	1	2	-0.578701
chrX	122242008	122242616	122242312	ENSG00000280142.1	+	TEC	KNOWN	RP13-16D10.1	1	1	0.106942
chrX	122471725	122471818	122471771	ENSG00000221317.1	-	miRNA	NOVEL	AL513487.1	1	1	-0.417022
chrX	122538253	122539460	122538856	ENSG00000232496.2	+	processed_pseudogene	KNOWN	RPL3P12	1	1	-0.119512
chrX	122840426	122840645	122840535	ENSG00000212321.2	+	snoRNA	NOVEL	U3	1	1	-0.463223
chrX	123017819	123017909	123017864	ENSG00000263845.2	+	miRNA	NOVEL	AL109800.1	1	1	-0.087558
chrX	123116107	123117781	123116944	ENSG00000224236.3	-	processed_pseudogene	KNOWN	MRRFP1	1	1	-0.358670
chrX	123184153	123490915	123337534	ENSG00000125675.17	+	protein_coding	KNOWN	GRIA3	9	17	0.188190
chrX	123465093	123465177	123465135	ENSG00000265082.2	+	miRNA	NOVEL	AL356213.1	1	1	0.400942
chrX	123514473	123514872	123514672	ENSG00000179101.5	+	processed_pseudogene	KNOWN	RP11-349N19.2	1	1	0.367626
chrX	123558350	123558584	123558467	ENSG00000229733.1	+	processed_pseudogene	KNOWN	RP5-1189B24.1	1	1	-0.258505
chrX	123561642	123562966	123562304	ENSG00000228466.1	+	processed_pseudogene	KNOWN	TUBB4AP1	1	1	-0.258505
chrX	123600561	123733056	123666808	ENSG00000125676.19	-	protein_coding	KNOWN	THOC2	20	39	0.135447
chrX	123603139	123603931	123603535	ENSG00000232149.1	+	processed_pseudogene	KNOWN	FERP1	1	1	0.113365
chrX	123765301	123765686	123765493	ENSG00000230376.1	+	processed_pseudogene	KNOWN	MEMO1P4	1	1	0.473862
chrX	123772078	123772139	123772108	ENSG00000252178.1	-	snRNA	KNOWN	RNU7-69P	1	1	0.335263
chrX	123785009	123785451	123785230	ENSG00000226902.1	+	processed_pseudogene	KNOWN	CHCHD2P1	1	1	0.335263
chrX	123811331	123811587	123811459	ENSG00000264933.2	-	misc_RNA	KNOWN	RN7SL190P	1	1	0.428275
chrX	123857062	123857163	123857112	ENSG00000199705.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.182190
chrX	123859724	123913979	123886851	ENSG00000101966.12	+	protein_coding	KNOWN	XIAP	11	7	0.398773
chrX	123872626	123873932	123873279	ENSG00000237331.1	-	antisense	KNOWN	XIAP-AS1	1	2	0.569039
chrX	123874459	123874565	123874512	ENSG00000252627.1	+	snRNA	KNOWN	RNU6-122P	1	1	0.569039
chrX	123878590	123879296	123878943	ENSG00000237025.1	-	processed_pseudogene	KNOWN	RP1-315G1.1	1	1	0.569039
chrX	123959233	123961341	123960287	ENSG00000232412.1	-	lincRNA	KNOWN	RP1-315G1.3	1	2	0.272564
chrX	123960212	124422664	124191438	ENSG00000101972.18	+	protein_coding	KNOWN	STAG2	18	35	-0.042380
chrX	124173001	124174459	124173730	ENSG00000237426.1	-	processed_pseudogene	KNOWN	ZIK1P1	1	1	-0.180534
chrX	124197743	124197849	124197796	ENSG00000252693.1	+	snoRNA	NOVEL	SNORA40	1	1	0.256111
chrX	124204499	124205806	124205152	ENSG00000234564.1	-	processed_pseudogene	KNOWN	HSPA8P20	1	2	0.256111
chrX	124227868	124373197	124300532	ENSG00000183918.15	+	protein_coding	KNOWN	SH2D1A	6	6	-0.131276
chrX	124246249	124336862	124291555	ENSG00000282419.2	+	protein_coding	KNOWN	RP5-1052M9.5	2	2	-0.210405
chrX	124280530	124281422	124280976	ENSG00000232054.1	+	processed_pseudogene	KNOWN	NPM1P34	1	1	-0.088580
chrX	124326175	124326258	124326216	ENSG00000226532.1	-	processed_pseudogene	KNOWN	RP5-1052M9.1	1	1	-0.515691
chrX	124375903	124963817	124669860	ENSG00000009694.13	-	protein_coding	KNOWN	TENM1	3	32	-0.310358
chrX	124688504	124688838	124688671	ENSG00000236880.1	-	processed_pseudogene	KNOWN	RP3-384D21.2	1	1	-0.347293
chrX	125199151	125199286	125199218	ENSG00000281303.1	-	miRNA	NOVEL	AL008707.1	1	1	-0.976721
chrX	125203805	125204338	125204071	ENSG00000232599.1	-	processed_pseudogene	KNOWN	RP1-161N10.1	1	1	-0.976721
chrX	125204378	125204511	125204444	ENSG00000280699.1	-	misc_RNA	NOVEL	SMAD5-AS1_2	1	1	-0.976721
chrX	125287776	125287843	125287809	ENSG00000263886.1	+	miRNA	NOVEL	AL953885.1	1	1	-1.440503
chrX	125320120	125325214	125322667	ENSG00000282815.1	+	protein_coding	KNOWN	RP13-147D17.3	1	1	-0.697790
chrX	125326897	125328021	125327459	ENSG00000213489.3	-	processed_pseudogene	KNOWN	RP13-147D17.1	1	1	-0.697790
chrX	125662904	125662994	125662949	ENSG00000222518.1	+	miRNA	NOVEL	FO393407.1	1	1	-0.586080
chrX	126004446	126006118	126005282	ENSG00000280223.1	-	TEC	KNOWN	RP1-138O17.1	1	1	-0.634443
chrX	126109762	126115562	126112662	ENSG00000237208.1	+	lincRNA	KNOWN	RP11-13E5.2	1	3	-0.069427
chrX	126164531	126165951	126165241	ENSG00000198354.5	-	protein_coding	KNOWN	DCAF12L2	1	1	-0.464402
chrX	126471705	126472403	126472054	ENSG00000230916.2	+	processed_pseudogene	KNOWN	RP11-10B2.1	1	1	-0.021325
chrX	126472728	126472884	126472806	ENSG00000231501.1	+	processed_pseudogene	KNOWN	MTND4LP1	1	1	-0.021325
chrX	126472809	126472882	126472845	ENSG00000264338.1	-	miRNA	NOVEL	AL359973.1	1	1	-0.021325
chrX	126472885	126473281	126473083	ENSG00000232177.1	+	processed_pseudogene	KNOWN	MTND4P24	1	1	-0.021325
chrX	126502898	126503144	126503021	ENSG00000274901.1	-	processed_pseudogene	KNOWN	LL0XNC01-220B11.1	1	1	-0.157368
chrX	126549383	126552851	126551117	ENSG00000198889.4	-	protein_coding	KNOWN	DCAF12L1	1	2	-0.667238
chrX	126729104	126730226	126729665	ENSG00000226414.1	+	processed_pseudogene	KNOWN	RP11-375A20.1	1	1	-0.385991
chrX	126732436	126732520	126732478	ENSG00000263686.1	-	miRNA	NOVEL	AL391375.1	1	1	-0.316814
chrX	126819764	126821786	126820775	ENSG00000183631.4	+	protein_coding	KNOWN	PRR32	1	2	-0.317121
chrX	126863514	126863581	126863547	ENSG00000274871.1	-	miRNA	NOVEL	AL596243.1	1	1	-0.162581
chrX	127390342	127392526	127391434	ENSG00000230538.1	+	processed_pseudogene	KNOWN	RP3-428A13.1	1	2	-0.323046
chrX	127392760	127394771	127393765	ENSG00000280275.1	+	TEC	KNOWN	RP3-428A13.2	1	1	-0.323046
chrX	127623410	127623530	127623470	ENSG00000274631.1	-	processed_pseudogene	KNOWN	RP11-368E13.1	1	1	-0.580434
chrX	127660631	127662530	127661580	ENSG00000260683.1	-	lincRNA	KNOWN	CTD-2076M15.1	1	1	-0.180088
chrX	127728734	127730858	127729796	ENSG00000235274.1	-	processed_pseudogene	KNOWN	RP1-107N3.1	1	3	-0.215445
chrX	127796124	127796733	127796428	ENSG00000224548.1	+	processed_pseudogene	KNOWN	RP1-107N3.2	1	2	-0.469124
chrX	128050962	128052398	128051680	ENSG00000123165.8	-	protein_coding	KNOWN	ACTRT1	1	1	-0.614277
chrX	128098032	128098529	128098280	ENSG00000236042.2	-	processed_pseudogene	KNOWN	RP1-203C2.2	1	1	-0.543244
chrX	128122734	128123496	128123115	ENSG00000235334.1	+	processed_pseudogene	KNOWN	BTG3P1	1	2	-0.406462
chrX	128127090	128128212	128127651	ENSG00000235239.1	-	processed_pseudogene	KNOWN	RP1-203C2.4	1	1	-0.406462
chrX	128313281	128314048	128313664	ENSG00000235735.1	+	processed_pseudogene	KNOWN	RPL7AP72	1	1	-0.597079
chrX	128319027	128319080	128319053	ENSG00000276801.1	-	miRNA	NOVEL	Z70272.1	1	1	-0.597079
chrX	128323620	128600468	128462044	ENSG00000225689.1	-	lincRNA	KNOWN	RP1-30E17.2	1	4	-0.351779
chrX	128440929	128441785	128441357	ENSG00000226802.1	+	processed_pseudogene	KNOWN	RP11-72I18.1	1	1	-0.035120
chrX	128714506	128715790	128715148	ENSG00000218728.3	+	processed_pseudogene	KNOWN	KRT18P44	1	1	-0.492971
chrX	128838441	128838834	128838637	ENSG00000223995.2	-	processed_pseudogene	KNOWN	RPL32P35	1	1	-0.582913
chrX	129041536	129043183	129042359	ENSG00000234592.1	-	processed_pseudogene	KNOWN	RP11-41L14.1	1	1	-0.197515
chrX	129408382	129408621	129408501	ENSG00000226339.1	+	processed_pseudogene	KNOWN	RPS26P56	1	1	-0.289098
chrX	129436530	129436647	129436588	ENSG00000201518.1	-	rRNA	KNOWN	RNA5SP513	1	1	0.154728
chrX	129446501	129523500	129485000	ENSG00000102038.15	-	protein_coding	KNOWN	SMARCA1	5	25	0.206841
chrX	129518576	129518647	129518611	ENSG00000252170.2	+	snoRNA	NOVEL	SNORD112	1	1	0.610123
chrX	129539849	129592561	129566205	ENSG00000122126.15	+	protein_coding	KNOWN	OCRL	4	24	0.222795
chrX	129645259	129654937	129650098	ENSG00000171388.11	-	protein_coding	KNOWN	APLN	1	3	0.224177
chrX	129738974	129769538	129754256	ENSG00000122121.10	+	protein_coding	KNOWN	XPNPEP2	2	21	0.761023
chrX	129779979	129795201	129787590	ENSG00000122122.9	+	protein_coding	KNOWN	SASH3	2	8	0.389573
chrX	129794994	129796963	129795978	ENSG00000240143.1	+	3prime_overlapping_ncrna	KNOWN	RP4-753P9.3	1	3	0.742543
chrX	129796491	129796783	129796637	ENSG00000275070.1	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	0.742543
chrX	129803288	129843909	129823598	ENSG00000188706.12	-	protein_coding	KNOWN	ZDHHC9	5	11	0.417028
chrX	129869064	129957528	129913296	ENSG00000235189.1	-	antisense	KNOWN	RP4-537K23.4	1	4	0.645424
chrX	129871309	129877567	129874438	ENSG00000238040.1	+	processed_pseudogene	KNOWN	SALL4P2	1	3	0.891294
chrX	129906121	129929761	129917941	ENSG00000156697.12	+	protein_coding	KNOWN	UTP14A	4	15	0.573839
chrX	129981107	130058083	130019595	ENSG00000085185.15	+	protein_coding	KNOWN	BCORL1	6	13	0.829581
chrX	130064874	130110716	130087795	ENSG00000102034.16	-	protein_coding	KNOWN	ELF4	4	10	1.031884
chrX	130129362	130165887	130147624	ENSG00000156709.13	-	protein_coding	KNOWN	AIFM1	9	17	0.273491
chrX	130171649	130184870	130178259	ENSG00000134594.4	+	protein_coding	KNOWN	RAB33A	1	2	0.572882
chrX	130202711	130268899	130235805	ENSG00000056277.15	-	protein_coding	KNOWN	ZNF280C	2	19	0.103783
chrX	130310072	130310178	130310125	ENSG00000202304.1	-	snRNA	KNOWN	RNU6-1130P	1	1	-0.013803
chrX	130330857	130331069	130330963	ENSG00000225046.2	+	processed_pseudogene	KNOWN	RP1-20I3.3	1	1	0.107933
chrX	130339888	130373361	130356624	ENSG00000102078.15	+	protein_coding	KNOWN	SLC25A14	15	12	0.138669
chrX	130384440	130385447	130384943	ENSG00000147262.3	-	protein_coding	KNOWN	GPR119	1	1	-0.108921
chrX	130401969	130413343	130407656	ENSG00000134597.13	+	protein_coding	KNOWN	RBMX2	5	7	0.191728
chrX	130445085	130475614	130460349	ENSG00000274775.1	-	unprocessed_pseudogene	KNOWN	RP1-274L7.4	1	16	-0.271220
chrX	130477069	130524257	130500663	ENSG00000229702.1	-	lincRNA	KNOWN	RP1-274L7.1	1	12	-0.155444
chrX	130494965	130496588	130495776	ENSG00000221930.6	+	transcribed_processed_pseudogene	KNOWN	FAM45B	2	1	-0.041275
chrX	130545586	130546474	130546030	ENSG00000271677.1	+	unprocessed_pseudogene	KNOWN	RP1-274L7.3	1	2	-0.050452
chrX	130623369	130903317	130763343	ENSG00000165675.16	-	protein_coding	KNOWN	ENOX2	7	16	-0.060698
chrX	130645723	130646325	130646024	ENSG00000238188.1	+	processed_pseudogene	KNOWN	RP5-875H3.2	1	1	-0.127575
chrX	130981590	131058146	131019868	ENSG00000228659.1	-	antisense	KNOWN	LINC01201	2	3	-0.187057
chrX	131058242	131089883	131074062	ENSG00000147256.10	+	protein_coding	KNOWN	ARHGAP36	5	12	0.096149
chrX	131134086	131134390	131134238	ENSG00000241198.3	-	misc_RNA	KNOWN	RN7SL191P	1	1	-0.758865
chrX	131204128	131205004	131204566	ENSG00000237650.1	+	processed_pseudogene	KNOWN	OR11Q1P	1	1	-0.501688
chrX	131221196	131221436	131221316	ENSG00000276205.1	-	unprocessed_pseudogene	KNOWN	RP11-529O20.2	1	1	-0.202191
chrX	131273506	131578899	131426202	ENSG00000147255.18	-	protein_coding	KNOWN	IGSF1	8	27	-0.276993
chrX	131324398	131325250	131324824	ENSG00000185903.9	-	processed_pseudogene	KNOWN	OR11N1P	1	1	-0.508912
chrX	131341447	131342452	131341949	ENSG00000229082.1	-	processed_pseudogene	KNOWN	OR5AW1P	1	1	0.030591
chrX	131398054	131398972	131398513	ENSG00000242610.1	-	processed_pseudogene	KNOWN	OR5BH1P	1	1	-0.123276
chrX	131404510	131404602	131404556	ENSG00000216047.2	-	miRNA	NOVEL	AL135784.1	1	1	-0.123276
chrX	131424299	131425214	131424756	ENSG00000234288.1	+	processed_pseudogene	KNOWN	OR1AA1P	1	1	-0.347540
chrX	131437055	131437670	131437362	ENSG00000230973.1	-	processed_pseudogene	KNOWN	RP1-154J13.2	1	1	-0.669848
chrX	131492279	131492886	131492582	ENSG00000228450.2	-	processed_pseudogene	KNOWN	RP1-154J13.3	1	1	-0.216761
chrX	131544074	131545000	131544537	ENSG00000171054.7	+	protein_coding	KNOWN	OR13H1	1	1	-0.077933
chrX	131562738	131563834	131563286	ENSG00000237225.1	+	processed_pseudogene	KNOWN	OR13K1P	1	2	-0.515166
chrX	131596139	131596838	131596488	ENSG00000232787.1	+	processed_pseudogene	KNOWN	OR7L1P	1	2	-0.181573
chrX	131619021	131619909	131619465	ENSG00000235730.1	+	processed_pseudogene	KNOWN	OR2AF1P	1	1	-0.389877
chrX	131646639	131646890	131646764	ENSG00000227183.3	+	processed_pseudogene	KNOWN	HDGFP1	1	1	-0.451151
chrX	131702650	131830643	131766646	ENSG00000213468.3	-	lincRNA	KNOWN	FIRRE	1	13	0.156804
chrX	131795657	131796167	131795912	ENSG00000241418.1	-	processed_pseudogene	KNOWN	FAM195CP	1	1	-0.119512
chrX	131803312	131803741	131803526	ENSG00000228089.1	-	processed_pseudogene	KNOWN	PNKDP1	1	1	-0.119512
chrX	131937670	131937853	131937761	ENSG00000235190.1	+	processed_pseudogene	KNOWN	RP1-197O17.3	1	1	-0.007544
chrX	131938846	131938956	131938901	ENSG00000200587.1	-	rRNA	KNOWN	RNA5SP514	1	1	-0.007544
chrX	131996845	131996933	131996889	ENSG00000265686.1	+	miRNA	NOVEL	KF459411.1	1	1	-0.186984
chrX	132023265	132075943	132049604	ENSG00000134602.15	+	protein_coding	KNOWN	STK26	5	13	-0.303839
chrX	132076993	132128020	132102506	ENSG00000165694.9	-	protein_coding	KNOWN	FRMD7	3	12	0.111310
chrX	132130091	132131352	132130721	ENSG00000228819.1	-	processed_pseudogene	KNOWN	RP1-305B16.3	1	1	-0.270578
chrX	132203024	132219480	132211252	ENSG00000123728.9	-	protein_coding	KNOWN	RAP2C	5	6	0.042629
chrX	132217147	132432862	132325004	ENSG00000232160.6	+	antisense	KNOWN	RAP2C-AS1	2	3	-0.238686
chrX	132369317	132489968	132429642	ENSG00000076770.14	-	protein_coding	KNOWN	MBNL3	12	9	-0.260947
chrX	132435097	132435189	132435143	ENSG00000277353.1	-	miRNA	NOVEL	AL050310.1	1	1	-0.507470
chrX	132580117	132580223	132580170	ENSG00000206900.1	-	snRNA	KNOWN	RNU6-98P	1	1	0.007103
chrX	132626016	132961395	132793705	ENSG00000171004.17	-	protein_coding	KNOWN	HS6ST2	5	6	-0.026386
chrX	132667642	132669888	132668765	ENSG00000235849.1	+	antisense	KNOWN	HS6ST2-AS1	1	3	0.252456
chrX	132890379	132890470	132890424	ENSG00000277433.1	-	miRNA	NOVEL	Z82205.1	1	1	-0.171043
chrX	132907279	132907575	132907427	ENSG00000227064.1	-	processed_pseudogene	KNOWN	RP3-363L9.1	1	1	-0.171043
chrX	133024631	133097109	133060870	ENSG00000134588.12	-	protein_coding	KNOWN	USP26	3	6	-0.202254
chrX	133141300	133143940	133142620	ENSG00000225949.1	-	processed_pseudogene	KNOWN	RP3-358H7.1	1	4	0.091992
chrX	133152752	133152818	133152785	ENSG00000281231.1	+	miRNA	NOVEL	Z77249.1	1	1	-0.120312
chrX	133152754	133152892	133152823	ENSG00000207100.1	+	snoRNA	NOVEL	SNORA8	1	1	-0.120312
chrX	133216669	133218348	133217508	ENSG00000183434.9	-	protein_coding	KNOWN	TFDP3	1	1	-0.013618
chrX	133238657	133238816	133238736	ENSG00000202199.1	-	snRNA	KNOWN	RNU1-115P	1	1	-0.112367
chrX	133300103	133415490	133357796	ENSG00000076716.8	-	protein_coding	KNOWN	GPC4	1	9	-0.153596
chrX	133531723	133531826	133531774	ENSG00000206765.1	-	snRNA	KNOWN	RNU6-203P	1	1	-0.027061
chrX	133535745	133985895	133760820	ENSG00000147257.13	-	protein_coding	KNOWN	GPC3	4	9	-0.241670
chrX	133670971	133671386	133671178	ENSG00000227008.2	+	processed_pseudogene	KNOWN	RP3-417G15.1	1	1	0.091992
chrX	133746748	133746846	133746797	ENSG00000211495.1	-	miRNA	NOVEL	AL009174.1	1	1	-0.186984
chrX	133762796	133763683	133763239	ENSG00000233260.1	+	processed_pseudogene	KNOWN	RPSAP63	1	1	-0.547126
chrX	133989443	133990086	133989764	ENSG00000232068.1	+	unprocessed_pseudogene	KNOWN	AF003529.2	1	1	-0.024592
chrX	134142228	134142340	134142284	ENSG00000200572.1	-	misc_RNA	NOVEL	Y_RNA	1	1	-0.381939
chrX	134166682	134166932	134166807	ENSG00000224908.1	+	processed_pseudogene	KNOWN	TIMM8BP2	1	1	0.152746
chrX	134169361	134169473	134169417	ENSG00000207572.2	-	miRNA	KNOWN	MIR363	1	1	0.152746
chrX	134169538	134169612	134169575	ENSG00000208034.1	-	miRNA	KNOWN	MIR92A2	1	1	0.152746
chrX	134169671	134169767	134169719	ENSG00000207812.2	-	miRNA	KNOWN	MIR19B2	1	1	0.152746
chrX	134169809	134169877	134169843	ENSG00000207710.1	-	miRNA	KNOWN	MIR20B	1	1	0.152746
chrX	134170017	134170125	134170071	ENSG00000239594.3	-	miRNA	KNOWN	MIR18B	1	1	-0.157986
chrX	134170198	134170278	134170238	ENSG00000207602.1	-	miRNA	KNOWN	MIR106A	1	1	-0.157986
chrX	134204353	134205916	134205134	ENSG00000232664.2	+	processed_pseudogene	KNOWN	LARP1BP3	1	2	-0.346129
chrX	134237047	134246207	134241627	ENSG00000203952.9	+	protein_coding	KNOWN	CCDC160	2	3	0.109065
chrX	134272287	134273658	134272972	ENSG00000214961.2	+	processed_pseudogene	KNOWN	RP11-355K23B.1	1	1	-0.371409
chrX	134373253	134428791	134401022	ENSG00000156531.16	+	protein_coding	KNOWN	PHF6	5	11	-0.130611
chrX	134403298	134403382	134403340	ENSG00000251962.1	-	miRNA	NOVEL	AL591668.1	1	1	0.024878
chrX	134460153	134520513	134490333	ENSG00000165704.14	+	protein_coding	KNOWN	HPRT1	3	9	0.416000
chrX	134522702	134522990	134522846	ENSG00000226107.1	+	processed_pseudogene	KNOWN	AC004383.3	1	1	0.689893
chrX	134540161	134540272	134540216	ENSG00000216001.2	-	miRNA	KNOWN	MIR450B	1	1	0.754957
chrX	134540341	134540431	134540386	ENSG00000199132.1	-	miRNA	KNOWN	MIR450A1	1	1	0.754957
chrX	134540495	134540605	134540550	ENSG00000207755.2	-	miRNA	KNOWN	MIR450A2	1	1	0.754957
chrX	134541344	134541455	134541399	ENSG00000207784.2	-	miRNA	KNOWN	MIR542	1	1	0.754957
chrX	134543337	134546632	134544984	ENSG00000223749.7	-	lincRNA	KNOWN	MIR503HG	5	3	0.754957
chrX	134546328	134546398	134546363	ENSG00000208005.1	-	miRNA	KNOWN	MIR503	1	1	0.754957
chrX	134546611	134546721	134546666	ENSG00000274784.1	-	miRNA	KNOWN	MIR424	1	1	0.754957
chrX	134549973	134559923	134554948	ENSG00000227060.6	+	lincRNA	KNOWN	LINC00629	2	3	0.478008
chrX	134565838	134764322	134665080	ENSG00000170965.9	-	protein_coding	KNOWN	PLAC1	4	3	0.405541
chrX	134599457	134606254	134602855	ENSG00000235813.1	+	lincRNA	KNOWN	RP11-308B5.2	1	4	0.245797
chrX	134607157	134607632	134607394	ENSG00000236509.2	+	processed_pseudogene	KNOWN	RPL21P133	1	1	0.245797
chrX	134650830	134651411	134651120	ENSG00000237432.2	+	processed_pseudogene	KNOWN	RPS7P12	1	1	0.391552
chrX	134760208	134760348	134760278	ENSG00000199920.1	-	snRNA	KNOWN	RNU4-44P	1	1	0.683352
chrX	134769566	134797232	134783399	ENSG00000156504.16	-	protein_coding	KNOWN	FAM122B	8	11	0.332832
chrX	134796789	134854610	134825699	ENSG00000156500.14	+	protein_coding	KNOWN	FAM122C	11	7	0.248955
chrX	134799782	134799945	134799863	ENSG00000280249.1	-	pseudogene	NOVEL	AL691477.1	1	2	0.059570
chrX	134887626	134915267	134901446	ENSG00000101928.12	-	protein_coding	KNOWN	MOSPD1	7	6	0.278402
chrX	134895754	134895842	134895798	ENSG00000221299.1	+	miRNA	NOVEL	Z83826.1	1	1	0.271698
chrX	134918310	134918416	134918363	ENSG00000207081.1	-	snRNA	KNOWN	RNU6-616P	1	1	0.334193
chrX	134949549	134953382	134951465	ENSG00000236091.1	+	lincRNA	KNOWN	RP3-473B4.3	1	3	0.581732
chrX	134961711	134962305	134962008	ENSG00000231929.2	-	processed_pseudogene	KNOWN	HMGB3P31	1	1	0.593390
chrX	134990938	134992473	134991705	ENSG00000184785.5	+	protein_coding	KNOWN	SMIM10	1	1	0.312382
chrX	135020504	135022529	135021516	ENSG00000212747.4	-	protein_coding	KNOWN	FAM127C	1	1	0.295084
chrX	135032366	135033546	135032956	ENSG00000134590.13	+	protein_coding	KNOWN	FAM127A	3	2	0.206163
chrX	135050932	135052196	135051564	ENSG00000203950.6	-	protein_coding	KNOWN	FAM127B	4	2	0.170847
chrX	135059685	135123952	135091818	ENSG00000228372.7	+	lincRNA	KNOWN	RP11-85L21.4	2	3	0.244968
chrX	135075136	135076597	135075866	ENSG00000234228.1	-	processed_pseudogene	KNOWN	NCLP2	1	1	0.200052
chrX	135095028	135098634	135096831	ENSG00000196972.7	-	protein_coding	KNOWN	SMIM10L2B	1	2	0.220890
chrX	135118955	135120526	135119740	ENSG00000224107.5	-	lincRNA	KNOWN	LINC00633	2	3	0.398653
chrX	135123239	135123604	135123421	ENSG00000223809.1	-	lincRNA	KNOWN	RP11-85L21.6	1	2	0.398653
chrX	135135149	135135770	135135459	ENSG00000232582.1	-	processed_pseudogene	KNOWN	RP11-85L21.5	1	1	-0.214986
chrX	135156536	135171398	135163967	ENSG00000169551.12	-	protein_coding	KNOWN	CT55	2	6	0.147125
chrX	135180255	135194679	135187467	ENSG00000236491.1	-	unprocessed_pseudogene	KNOWN	RP13-565O16.2	1	6	-0.082176
chrX	135201731	135215232	135208481	ENSG00000228922.1	+	unprocessed_pseudogene	KNOWN	RP13-210D15.1	1	4	-0.180930
chrX	135206561	135206646	135206603	ENSG00000264894.1	+	miRNA	NOVEL	AC234771.1	1	1	-0.344107
chrX	135236895	135237408	135237151	ENSG00000269833.2	+	processed_pseudogene	KNOWN	RP11-11A5.1	1	1	0.137316
chrX	135248920	135344087	135296503	ENSG00000186376.14	-	protein_coding	KNOWN	ZNF75D	4	7	0.212504
chrX	135252576	135253583	135253079	ENSG00000238210.2	+	lincRNA	KNOWN	RP13-210D15.4	2	2	-0.001984
chrX	135297046	135298585	135297815	ENSG00000274024.1	+	processed_pseudogene	KNOWN	RP13-210D15.8	1	2	0.276416
chrX	135344796	135363152	135353974	ENSG00000173275.12	+	protein_coding	KNOWN	ZNF449	2	5	0.265696
chrX	135396429	135397764	135397096	ENSG00000229015.1	+	lincRNA	KNOWN	RP11-265D19.6	1	2	-0.197515
chrX	135421943	135428074	135425008	ENSG00000178947.8	+	protein_coding	KNOWN	SMIM10L2A	1	2	-0.379629
chrX	135428168	135428285	135428226	ENSG00000201440.1	-	rRNA	KNOWN	RNA5SP515	1	1	-0.379629
chrX	135432960	135438634	135435797	ENSG00000225769.1	+	processed_pseudogene	KNOWN	CROCCP1	1	1	0.470503
chrX	135445897	135447368	135446632	ENSG00000273988.1	-	unprocessed_pseudogene	KNOWN	RP11-265D19.8	1	3	0.470503
chrX	135464329	135465484	135464906	ENSG00000271158.1	-	processed_pseudogene	KNOWN	RP11-265D19.7	1	1	0.034659
chrX	135520083	135520674	135520378	ENSG00000225235.1	-	antisense	KNOWN	DDX26B-AS1	1	2	0.108866
chrX	135520659	135582510	135551584	ENSG00000165359.14	+	protein_coding	KNOWN	DDX26B	5	17	0.028033
chrX	135568567	135568666	135568616	ENSG00000264284.1	-	miRNA	NOVEL	AL391380.1	1	1	-0.310767
chrX	135583651	135585160	135584405	ENSG00000237833.1	-	processed_pseudogene	KNOWN	RP11-432N13.2	1	2	-0.064127
chrX	135598927	135615431	135607179	ENSG00000224539.1	+	unprocessed_pseudogene	KNOWN	SAGE4P	1	24	-0.324659
chrX	135637623	135642756	135640189	ENSG00000277486.1	-	unprocessed_pseudogene	KNOWN	SAGE3P	1	12	0.170847
chrX	135673591	135686151	135679871	ENSG00000198022.6	-	unprocessed_pseudogene	KNOWN	SAGE2P	1	15	-0.207568
chrX	135710095	135710377	135710236	ENSG00000274601.1	-	unprocessed_pseudogene	KNOWN	WI2-88277B6.1	1	1	-0.402117
chrX	135713453	135723539	135718496	ENSG00000268940.5	+	protein_coding	KNOWN	CT45A1	2	5	-0.402117
chrX	135730733	135732197	135731465	ENSG00000233861.1	-	processed_pseudogene	KNOWN	MGAT2P1	1	2	-0.112367
chrX	135751119	135752583	135751851	ENSG00000238200.1	+	processed_pseudogene	KNOWN	MGAT2P2	1	2	-0.171043
chrX	135759846	135768191	135764018	ENSG00000269096.6	-	protein_coding	KNOWN	CT45A3	2	5	-0.171043
chrX	135777130	135785298	135781214	ENSG00000228836.8	-	protein_coding	KNOWN	CT45A5	2	5	-0.216958
chrX	135794706	135802656	135798681	ENSG00000278289.4	-	protein_coding	KNOWN	CT45A6	2	5	0.069965
chrX	135811668	135820012	135815840	ENSG00000271449.7	-	protein_coding	KNOWN	CT45A2	2	5	0.020439
chrX	135829247	135837268	135833257	ENSG00000273696.4	-	protein_coding	KNOWN	CT45A7	2	5	-0.050424
chrX	135846499	135854538	135850518	ENSG00000278085.4	-	protein_coding	KNOWN	CT45A8	2	5	-0.060565
chrX	135863776	135871812	135867794	ENSG00000270946.5	-	protein_coding	KNOWN	CT45A9	2	5	-0.007474
chrX	135881063	135889086	135885074	ENSG00000269586.7	-	protein_coding	KNOWN	CT45A10	2	5	0.182190
chrX	135889205	135913061	135901133	ENSG00000181433.9	+	protein_coding	KNOWN	SAGE1	3	20	0.122557
chrX	135942478	135947139	135944808	ENSG00000230162.1	-	unprocessed_pseudogene	KNOWN	CT45A11P	1	4	0.107759
chrX	135962070	135974063	135968066	ENSG00000169446.5	-	protein_coding	KNOWN	MMGT1	1	4	-0.044621
chrX	135985424	136047269	136016346	ENSG00000198689.9	+	protein_coding	KNOWN	SLC9A6	6	17	0.444506
chrX	136008483	136008573	136008528	ENSG00000276558.1	+	miRNA	NOVEL	AL732579.1	1	1	0.614670
chrX	136077844	136078631	136078237	ENSG00000219930.4	+	processed_pseudogene	KNOWN	GAPDHP67	1	1	0.832605
chrX	136097835	136098348	136098091	ENSG00000231513.3	-	processed_pseudogene	KNOWN	E2F6P4	1	1	0.329031
chrX	136134317	136134420	136134368	ENSG00000239080.1	-	snoRNA	NOVEL	snoU13	1	1	0.309583
chrX	136146702	136211359	136179030	ENSG00000022267.16	+	protein_coding	KNOWN	FHL1	33	8	0.230590
chrX	136213220	136256482	136234851	ENSG00000129680.15	-	protein_coding	KNOWN	MAP7D3	8	19	0.493839
chrX	136295690	136300298	136297994	ENSG00000230079.1	-	processed_pseudogene	KNOWN	STK24P1	1	2	-0.023485
chrX	136300963	136416888	136358925	ENSG00000156920.10	+	protein_coding	KNOWN	ADGRG4	3	26	-0.069486
chrX	136487292	136487392	136487342	ENSG00000266272.1	+	miRNA	NOVEL	Z97632.1	1	1	0.212286
chrX	136487887	136493780	136490833	ENSG00000102239.4	+	protein_coding	KNOWN	BRS3	1	3	-0.209282
chrX	136497079	136512346	136504712	ENSG00000102241.11	+	protein_coding	KNOWN	HTATSF1	4	10	-0.387263
chrX	136532152	136556807	136544479	ENSG00000102243.12	+	protein_coding	KNOWN	VGLL1	4	5	-0.007181
chrX	136550878	136550960	136550919	ENSG00000216060.1	+	miRNA	KNOWN	MIR934	1	1	-0.153121
chrX	136571705	136571815	136571760	ENSG00000199424.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.190396
chrX	136583240	136583345	136583292	ENSG00000252320.1	+	snRNA	KNOWN	RNU6-320P	1	1	0.190396
chrX	136639543	136642429	136640986	ENSG00000233093.5	+	processed_transcript	KNOWN	LINC00892	3	3	-0.182868
chrX	136648193	136660390	136654291	ENSG00000102245.7	+	protein_coding	KNOWN	CD40LG	2	5	-0.118053
chrX	136665547	136782088	136723817	ENSG00000129675.15	-	protein_coding	KNOWN	ARHGEF6	3	22	0.121736
chrX	136773999	136774105	136774052	ENSG00000212510.1	+	snRNA	KNOWN	RNU6-972P	1	1	0.198907
chrX	136788286	136788787	136788536	ENSG00000271339.1	+	processed_pseudogene	KNOWN	RP11-1114A5.6	1	1	0.198907
chrX	136791064	136791780	136791422	ENSG00000231164.1	+	processed_pseudogene	KNOWN	RPL7P56	1	1	0.295084
chrX	136807223	136807877	136807550	ENSG00000225125.2	-	processed_pseudogene	KNOWN	RANP4	1	1	0.295084
chrX	136816477	136816574	136816525	ENSG00000202279.1	-	misc_RNA	NOVEL	Y_RNA	1	1	0.271541
chrX	136840931	136847797	136844364	ENSG00000232611.1	-	lincRNA	KNOWN	RP11-1114A5.4	1	2	0.336614
chrX	136847384	136848034	136847709	ENSG00000225400.1	+	processed_pseudogene	KNOWN	RAB28P5	1	1	0.336614
chrX	136848004	136880764	136864384	ENSG00000147274.14	-	protein_coding	KNOWN	RBMX	12	9	0.379585
chrX	136879199	136879271	136879235	ENSG00000206979.1	-	snoRNA	KNOWN	SNORD61	1	1	0.609840
chrX	136909395	137021630	136965512	ENSG00000234062.7	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-308D16.2	5	10	-0.055458
chrX	136947748	136948133	136947940	ENSG00000232379.1	-	processed_pseudogene	KNOWN	RP11-308D16.1	1	1	0.166760
chrX	136976417	136985705	136981061	ENSG00000237307.2	-	processed_pseudogene	KNOWN	SRRM1P3	1	3	-0.608448
chrX	137030148	137031674	137030911	ENSG00000165370.1	-	protein_coding	KNOWN	GPR101	1	1	0.139298
chrX	137324972	137325049	137325010	ENSG00000214748.2	-	processed_pseudogene	KNOWN	RP11-332E4.1	1	1	-0.060011
chrX	137441258	137441836	137441547	ENSG00000237584.1	-	processed_pseudogene	KNOWN	RAC1P4	1	1	0.050572
chrX	137556191	137564387	137560289	ENSG00000224765.1	-	antisense	KNOWN	RP1-137H15.2	2	3	0.043629
chrX	137566142	137577691	137571916	ENSG00000156925.11	+	protein_coding	KNOWN	ZIC3	3	3	-0.050926
chrX	137595265	137595547	137595406	ENSG00000239579.3	+	misc_RNA	KNOWN	RN7SL325P	1	1	-0.434077
chrX	137660519	137662242	137661380	ENSG00000229562.1	+	processed_pseudogene	KNOWN	ZFYVE9P1	1	1	-0.031997
chrX	137687891	137687994	137687942	ENSG00000222114.1	-	snRNA	KNOWN	RNU6-985P	1	1	-0.102656
chrX	138397351	138397628	138397489	ENSG00000252163.1	+	misc_RNA	KNOWN	RN7SKP31	1	1	-0.318096
chrX	138482745	138483695	138483220	ENSG00000183981.8	+	processed_pseudogene	KNOWN	MAGEA13P	1	1	-0.171043
chrX	138487665	138488871	138488268	ENSG00000214930.2	-	processed_pseudogene	KNOWN	KRT8P6	1	1	-0.171043
chrX	138614731	139222777	138918754	ENSG00000129682.13	-	protein_coding	KNOWN	FGF13	8	7	-0.243506
chrX	138627077	138627343	138627210	ENSG00000232183.1	+	antisense	KNOWN	RP6-27P15.2	1	2	-0.462597
chrX	138667692	138667800	138667746	ENSG00000207800.2	-	miRNA	KNOWN	MIR504	1	1	-0.400405
chrX	138711452	138716617	138714034	ENSG00000226031.5	+	antisense	KNOWN	FGF13-AS1	2	4	-0.393435
chrX	138806374	138807091	138806732	ENSG00000235975.1	+	processed_pseudogene	KNOWN	RP1-106C24.1	1	1	-0.601905
chrX	139362040	139362382	139362211	ENSG00000173954.8	+	processed_pseudogene	KNOWN	SNURFL	1	1	-0.492971
chrX	139446891	139447676	139447283	ENSG00000232549.1	+	processed_pseudogene	KNOWN	SRD5A1P1	1	1	-0.147474
chrX	139530758	139563458	139547108	ENSG00000101981.10	+	protein_coding	KNOWN	F9	3	8	-0.447173
chrX	139581770	139708227	139644998	ENSG00000101977.19	-	protein_coding	KNOWN	MCF2	10	29	-0.231177
chrX	139599216	139599303	139599259	ENSG00000216114.2	-	miRNA	NOVEL	AL033403.1	1	1	-0.614961
chrX	139702287	139702390	139702338	ENSG00000238485.1	-	snoRNA	NOVEL	snoU13	1	1	0.170847
chrX	139726346	139945276	139835811	ENSG00000101974.14	-	protein_coding	KNOWN	ATP11C	9	30	0.138127
chrX	139885481	139885603	139885542	ENSG00000221375.1	+	snRNA	KNOWN	RNU6ATAC23P	1	1	0.277547
chrX	139909904	139910034	139909969	ENSG00000252719.1	+	snoRNA	NOVEL	SNORA18	1	1	0.243933
chrX	139924126	139924237	139924181	ENSG00000207633.2	-	miRNA	KNOWN	MIR505	1	1	0.174454
chrX	139955725	139965520	139960622	ENSG00000203933.2	-	protein_coding	KNOWN	CXorf66	1	3	0.239334
chrX	140017268	140018037	140017652	ENSG00000233145.1	+	lincRNA	KNOWN	RP11-364B14.1	1	2	-0.130401
chrX	140032344	140033480	140032912	ENSG00000214653.4	+	processed_pseudogene	KNOWN	HNRNPA3P3	1	1	0.091992
chrX	140085855	140086150	140086002	ENSG00000241248.3	+	misc_RNA	KNOWN	RN7SL727P	1	1	0.042523
chrX	140086058	140086145	140086101	ENSG00000280833.1	+	miRNA	NOVEL	AL589987.1	1	1	0.042523
chrX	140091743	140092561	140092152	ENSG00000230707.1	+	processed_pseudogene	KNOWN	RP11-364B14.3	1	1	-0.492971
chrX	140216035	140216804	140216419	ENSG00000231110.1	-	lincRNA	KNOWN	AC004070.1	1	2	-0.097833
chrX	140397062	140398311	140397686	ENSG00000224942.1	+	processed_pseudogene	KNOWN	RP11-51C14.1	1	2	-0.225978
chrX	140404099	140404190	140404144	ENSG00000263377.1	-	miRNA	NOVEL	AL121875.1	1	1	-0.225978
chrX	140451148	140451208	140451178	ENSG00000275268.1	+	snRNA	NOVEL	U7	1	1	0.298443
chrX	140470866	140471274	140471070	ENSG00000225758.1	-	processed_pseudogene	KNOWN	RPS17P17	1	1	-0.485775
chrX	140502987	140505503	140504245	ENSG00000134595.7	-	protein_coding	KNOWN	SOX3	1	1	-0.147679
chrX	140681106	140687705	140684405	ENSG00000230668.1	-	lincRNA	KNOWN	XXyac-YR29IB3.1	1	3	-0.024822
chrX	140709767	140772679	140741223	ENSG00000203930.10	+	lincRNA	KNOWN	LINC00632	5	4	-0.075063
chrX	140782405	140784871	140783638	ENSG00000184258.6	-	protein_coding	KNOWN	CDR1	1	1	0.146440
chrX	140783176	140784660	140783918	ENSG00000281508.1	+	antisense	KNOWN	CDR1-AS	1	1	0.146440
chrX	140926172	140926219	140926195	ENSG00000221081.1	-	miRNA	KNOWN	MIR320D2	1	1	-0.361374
chrX	140931738	140997448	140964593	ENSG00000229269.1	+	lincRNA	KNOWN	RP11-298A8.2	1	3	-0.209508
chrX	141002591	141003706	141003148	ENSG00000227234.1	+	protein_coding	KNOWN	SPANXB1	1	2	-0.160395
chrX	141118030	141118136	141118083	ENSG00000207041.1	-	snRNA	KNOWN	RNU6-3P	1	1	-0.415803
chrX	141138478	141139174	141138826	ENSG00000214925.3	+	processed_pseudogene	KNOWN	RP3-507I15.1	1	2	-0.422581
chrX	141173235	141173588	141173411	ENSG00000261212.1	-	lincRNA	KNOWN	RP3-507I15.2	1	1	-0.246177
chrX	141175745	141177125	141176435	ENSG00000182195.7	-	protein_coding	KNOWN	LDOC1	2	2	-0.246177
chrX	141241463	141242496	141241979	ENSG00000198573.6	-	protein_coding	KNOWN	SPANXC	1	2	-0.051372
chrX	141261119	141264213	141262666	ENSG00000213423.4	-	processed_pseudogene	KNOWN	RBMX2P2	1	2	-0.226370
chrX	141380823	141381107	141380965	ENSG00000227779.1	+	processed_pseudogene	KNOWN	GS1-164F24.1	1	1	-0.088580
chrX	141502849	141649927	141576388	ENSG00000277215.1	+	lincRNA	KNOWN	SPANXA2-OT1	1	4	-0.030121
chrX	141583674	141698444	141641059	ENSG00000198021.6	-	protein_coding	KNOWN	SPANXA1	2	2	-0.081378
chrX	141589435	141590772	141590103	ENSG00000203926.4	+	protein_coding	KNOWN	SPANXA2	1	2	0.124738
chrX	141625864	141626733	141626298	ENSG00000223438.1	+	lincRNA	KNOWN	RP1-171K16.5	1	2	-0.204140
chrX	141697411	141698739	141698075	ENSG00000196406.4	-	protein_coding	KNOWN	SPANXD	1	2	-0.323046
chrX	141838316	141897832	141868074	ENSG00000165509.13	+	protein_coding	KNOWN	MAGEC3	5	8	-0.462331
chrX	141903894	141909388	141906641	ENSG00000155495.8	+	protein_coding	KNOWN	MAGEC1	2	4	0.342800
chrX	142147862	142148866	142148364	ENSG00000236205.1	-	unprocessed_pseudogene	KNOWN	RP3-406C18.1	1	1	-0.095635
chrX	142172866	142173989	142173427	ENSG00000225469.3	-	unprocessed_pseudogene	KNOWN	RP3-406C18.2	1	1	0.076050
chrX	142194352	142195490	142194921	ENSG00000250625.1	-	unprocessed_pseudogene	KNOWN	RP1-142F18.2	1	1	-0.144076
chrX	142202345	142205290	142203817	ENSG00000046774.9	-	protein_coding	KNOWN	MAGEC2	1	3	-0.144076
chrX	142372276	142373990	142373133	ENSG00000275508.1	+	processed_pseudogene	KNOWN	GS1-54N10.1	1	2	-0.365481
chrX	142411053	142411171	142411112	ENSG00000201000.1	+	rRNA	KNOWN	RNA5SP516	1	1	-0.334273
chrX	142428477	142428544	142428510	ENSG00000274448.1	+	miRNA	NOVEL	AL109620.1	1	1	-0.334273
chrX	142606860	142606945	142606902	ENSG00000266319.1	-	miRNA	NOVEL	AL080272.1	1	1	-0.404434
chrX	143025918	143034702	143030310	ENSG00000189326.4	+	protein_coding	KNOWN	SPANXN4	2	3	-0.308796
chrX	143090347	143090677	143090512	ENSG00000202473.1	+	misc_RNA	KNOWN	RN7SKP81	1	1	-0.282404
chrX	143197248	143197591	143197419	ENSG00000199878.1	-	misc_RNA	KNOWN	RN7SKP149	1	1	-0.651233
chrX	143284977	143516803	143400890	ENSG00000227303.1	+	antisense	KNOWN	GS1-256O22.5	1	6	-0.428710
chrX	143343976	143344585	143344280	ENSG00000226064.1	+	processed_pseudogene	KNOWN	PGBD4P6	1	1	-0.154648
chrX	143433042	143433958	143433500	ENSG00000235539.1	+	processed_pseudogene	KNOWN	MTND1P33	1	1	-0.591981
chrX	143434517	143435280	143434898	ENSG00000230130.1	+	processed_pseudogene	KNOWN	MTND2P39	1	1	-0.591981
chrX	143446208	143446337	143446272	ENSG00000221505.1	-	miRNA	NOVEL	AC239395.1	1	1	-0.591981
chrX	143508735	143517475	143513105	ENSG00000189252.4	-	protein_coding	KNOWN	SPANXN3	1	2	-0.167123
chrX	143622790	143635777	143629283	ENSG00000179542.15	-	protein_coding	KNOWN	SLITRK4	3	2	0.072432
chrX	143677153	143678362	143677757	ENSG00000213924.3	-	processed_pseudogene	KNOWN	HNRNPH1P2	1	1	-0.832720
chrX	143711955	143721423	143716689	ENSG00000268988.1	-	protein_coding	KNOWN	SPANXN2	1	2	-0.008535
chrX	143757737	143828133	143792935	ENSG00000225970.1	+	lincRNA	KNOWN	RP3-526F5.2	1	3	-0.410222
chrX	143806391	143806733	143806562	ENSG00000235729.1	+	processed_pseudogene	KNOWN	RP11-29O6.2	1	1	-0.365690
chrX	143884071	143885248	143884659	ENSG00000282795.1	+	pseudogene	KNOWN	UBE2NL	1	2	0.036139
chrX	143884071	143885255	143884663	ENSG00000276380.2	+	polymorphic_pseudogene	KNOWN	UBE2NL	1	1	0.036139
chrX	144308834	144309080	144308957	ENSG00000224630.2	-	processed_pseudogene	KNOWN	RP1-169P22.2	1	1	-0.201739
chrX	144309132	144309693	144309412	ENSG00000235598.1	+	processed_pseudogene	KNOWN	RRM2P4	1	1	-0.201739
chrX	144840777	144841660	144841218	ENSG00000215054.3	+	processed_pseudogene	KNOWN	HNRNPCP10	1	1	-0.380077
chrX	145057108	145057437	145057272	ENSG00000201912.1	+	misc_RNA	KNOWN	RN7SKP189	1	1	-0.133301
chrX	145176582	145176894	145176738	ENSG00000233548.1	+	processed_pseudogene	KNOWN	CYCSP44	1	1	-0.221166
chrX	145232929	145233619	145233274	ENSG00000234712.1	-	antisense	KNOWN	RP11-143G3.1	1	2	-0.031997
chrX	145246828	145256112	145251470	ENSG00000203923.4	+	protein_coding	KNOWN	SPANXN1	1	2	-0.051630
chrX	145630218	145632375	145631296	ENSG00000231093.1	+	processed_pseudogene	KNOWN	RP13-150K15.1	1	2	0.112170
chrX	145707665	145707742	145707703	ENSG00000280456.1	+	miRNA	NOVEL	AL109653.1	1	1	-0.307278
chrX	145768095	145768342	145768218	ENSG00000270709.1	+	processed_pseudogene	KNOWN	GS1-115M3.4	1	1	-0.133568
chrX	145797375	145798439	145797907	ENSG00000279585.1	+	TEC	KNOWN	GS1-115M3.3	1	1	-0.372971
chrX	145817832	145825842	145821837	ENSG00000185985.8	+	protein_coding	KNOWN	SLITRK2	2	5	-0.149016
chrX	145827410	145829850	145828630	ENSG00000221870.2	+	protein_coding	KNOWN	TMEM257	1	1	-0.149016
chrX	145992750	145992826	145992788	ENSG00000252219.2	-	miRNA	KNOWN	MIR892C	1	1	-0.179813
chrX	145994275	145994351	145994313	ENSG00000216075.1	-	miRNA	KNOWN	MIR890	1	1	-0.179813
chrX	145994784	145994860	145994822	ENSG00000216005.1	-	miRNA	KNOWN	MIR888	1	1	-0.179813
chrX	145996669	145996743	145996706	ENSG00000215943.1	-	miRNA	KNOWN	MIR892A	1	1	-0.179813
chrX	145997198	145997274	145997236	ENSG00000216098.1	-	miRNA	KNOWN	MIR892B	1	1	-0.179813
chrX	146001053	146001131	146001092	ENSG00000216064.1	-	miRNA	KNOWN	MIR891B	1	1	-0.179813
chrX	146027794	146027872	146027833	ENSG00000216056.1	-	miRNA	KNOWN	MIR891A	1	1	-0.987443
chrX	146427456	146427572	146427514	ENSG00000201594.1	-	rRNA	KNOWN	RNA5SP517	1	1	0.037544
chrX	146537535	146538048	146537791	ENSG00000234748.1	+	processed_pseudogene	KNOWN	RP11-183K14.1	1	1	-0.664737
chrX	146553728	146555765	146554746	ENSG00000226388.1	+	processed_pseudogene	KNOWN	ELL2P4	1	2	-0.337996
chrX	146619597	146620584	146620090	ENSG00000231686.1	-	processed_pseudogene	KNOWN	RP1-203P18.1	1	1	-0.141498
chrX	146809784	146810409	146810096	ENSG00000235699.2	+	lincRNA	KNOWN	CXorf51B	1	2	-0.478463
chrX	146814106	146814726	146814416	ENSG00000224440.1	-	lincRNA	KNOWN	CXorf51A	1	2	-0.501383
chrX	146955075	146955209	146955142	ENSG00000225660.1	+	processed_pseudogene	KNOWN	RP1-73A14.1	1	1	-0.189421
chrX	146964176	146964485	146964330	ENSG00000271660.1	-	processed_pseudogene	KNOWN	RP1-73A14.2	1	1	-0.189421
chrX	147189704	147189787	147189745	ENSG00000216171.1	-	miRNA	KNOWN	MIR513C	1	1	-0.083095
chrX	147199044	147199127	147199085	ENSG00000207871.2	-	miRNA	KNOWN	MIR513B	1	1	-0.332148
chrX	147213463	147213591	147213527	ENSG00000207873.1	-	miRNA	KNOWN	MIR513A1	1	1	-0.108706
chrX	147225826	147225952	147225889	ENSG00000207984.1	-	miRNA	KNOWN	MIR513A2	1	1	-0.108706
chrX	147230720	147230843	147230781	ENSG00000207731.1	-	miRNA	KNOWN	MIR506	1	1	-0.026190
chrX	147230984	147231077	147231030	ENSG00000207969.1	-	miRNA	KNOWN	MIR507	1	1	-0.026190
chrX	147236913	147237027	147236970	ENSG00000207589.1	-	miRNA	KNOWN	MIR508	1	1	-0.026190
chrX	147250151	147250230	147250190	ENSG00000252583.2	-	miRNA	KNOWN	MIR514B	1	1	-0.215190
chrX	147258760	147258850	147258805	ENSG00000212013.1	-	miRNA	KNOWN	MIR509-2	1	1	-0.215190
chrX	147259652	147259726	147259689	ENSG00000212014.1	-	miRNA	KNOWN	MIR509-3	1	1	-0.215190
chrX	147260532	147260625	147260578	ENSG00000208000.1	-	miRNA	KNOWN	MIR509-1	1	1	-0.215190
chrX	147272335	147272408	147272371	ENSG00000207641.1	-	miRNA	KNOWN	MIR510	1	1	0.257578
chrX	147279247	147279344	147279295	ENSG00000207868.1	-	miRNA	KNOWN	MIR514A1	1	1	0.257578
chrX	147281943	147282030	147281986	ENSG00000207866.1	-	miRNA	KNOWN	MIR514A2	1	1	0.257578
chrX	147284641	147284728	147284684	ENSG00000207867.1	-	miRNA	KNOWN	MIR514A3	1	1	0.257578
chrX	147476324	147476446	147476385	ENSG00000274579.1	+	processed_pseudogene	KNOWN	RP5-824H1.1	1	1	-0.449902
chrX	147591612	147591909	147591760	ENSG00000228855.1	-	processed_pseudogene	KNOWN	RP3-433G13.1	1	1	-0.551864
chrX	147801005	147801302	147801153	ENSG00000227505.1	+	processed_pseudogene	KNOWN	RP11-434J24.2	1	1	-0.619663
chrX	147812733	147812974	147812853	ENSG00000271175.1	-	processed_pseudogene	KNOWN	RP11-434J24.3	1	1	-0.012345
chrX	147827279	147827384	147827331	ENSG00000202051.1	+	snRNA	KNOWN	RNU6-382P	1	1	-0.012345
chrX	147900178	147901459	147900818	ENSG00000227083.1	-	antisense	KNOWN	L29074.3	1	2	-0.098339
chrX	147909431	147911817	147910624	ENSG00000268066.5	-	processed_transcript	KNOWN	FMR1-AS1	4	3	-0.229576
chrX	147911822	147911948	147911885	ENSG00000274086.1	+	misc_RNA	NOVEL	FMR1-AS1_2	1	1	-0.270578
chrX	147911951	147951125	147931538	ENSG00000102081.13	+	protein_coding	KNOWN	FMR1	20	17	-0.419364
chrX	147946941	147947583	147947262	ENSG00000236337.1	+	sense_intronic	KNOWN	FMR1-IT1	1	2	-0.557822
chrX	147981329	148026667	148003998	ENSG00000176988.8	+	protein_coding	KNOWN	FMR1NB	2	6	0.077627
chrX	148008100	148008215	148008157	ENSG00000201285.1	-	rRNA	NOVEL	5S_rRNA	1	1	0.147845
chrX	148052233	148052746	148052489	ENSG00000219507.4	+	processed_pseudogene	KNOWN	FTH1P8	1	1	-0.060011
chrX	148198014	148198878	148198446	ENSG00000233467.2	-	processed_pseudogene	KNOWN	U40455.1	1	1	-0.340119
chrX	148464708	148465428	148465068	ENSG00000176970.8	+	processed_pseudogene	KNOWN	RPL7L1P11	1	1	0.588668
chrX	148498113	148500615	148499364	ENSG00000237741.1	-	antisense	KNOWN	AC002368.4	1	2	-0.277958
chrX	148500619	149000663	148750641	ENSG00000155966.13	+	protein_coding	KNOWN	AFF2	5	21	-0.142680
chrX	148546878	148547397	148547137	ENSG00000223516.1	+	sense_intronic	KNOWN	AFF2-IT1	1	2	-0.283048
chrX	148822164	148822448	148822306	ENSG00000222313.1	-	misc_RNA	KNOWN	RN7SKP267	1	1	-0.201739
chrX	149056716	149057166	149056941	ENSG00000242186.1	+	unprocessed_pseudogene	KNOWN	AC002523.1	1	2	-0.440229
chrX	149312233	149312315	149312274	ENSG00000264702.1	+	miRNA	NOVEL	AC231656.1	1	1	-0.106788
chrX	149476990	149521096	149499043	ENSG00000010404.17	-	protein_coding	KNOWN	IDS	8	9	0.656266
chrX	149482543	149533935	149508239	ENSG00000241489.7	-	protein_coding	KNOWN	AF011889.5	4	9	0.684369
chrX	149511509	149526264	149518886	ENSG00000238039.1	-	lincRNA	KNOWN	AF011889.2	1	2	0.698171
chrX	149525001	149526043	149525522	ENSG00000176289.4	+	unprocessed_pseudogene	KNOWN	IDSP1	1	2	0.698171
chrX	149527591	149540959	149534275	ENSG00000241769.7	-	antisense	KNOWN	LINC00893	16	10	0.538499
chrX	149540355	149550510	149545432	ENSG00000197620.10	+	protein_coding	KNOWN	CXorf40A	12	6	0.475855
chrX	149548210	149549835	149549022	ENSG00000225261.1	-	antisense	KNOWN	RP5-937E21.8	1	2	0.503418
chrX	149581653	149587453	149584553	ENSG00000267978.5	-	protein_coding	KNOWN	MAGEA9B	4	4	-0.036016
chrX	149592515	149594716	149593615	ENSG00000268738.2	-	protein_coding	KNOWN	HSFX2	1	2	0.518257
chrX	149596556	149631912	149614234	ENSG00000269556.7	-	protein_coding	KNOWN	TMEM185A	11	7	0.393840
chrX	149649174	149650124	149649649	ENSG00000229322.1	-	processed_pseudogene	KNOWN	RP5-937E21.1	1	1	0.140644
chrX	149688228	149717266	149702747	ENSG00000185247.14	+	protein_coding	KNOWN	MAGEA11	4	7	0.158562
chrX	149757797	149757895	149757846	ENSG00000228833.1	+	unprocessed_pseudogene	KNOWN	RP5-1014O16.9	1	1	0.163782
chrX	149758021	149758295	149758158	ENSG00000223377.1	-	unprocessed_pseudogene	KNOWN	RP5-1014O16.1	1	1	0.163782
chrX	149760779	149760874	149760826	ENSG00000231694.1	+	unprocessed_pseudogene	KNOWN	RP5-1014O16.10	1	1	0.163782
chrX	149768897	149771368	149770132	ENSG00000235254.3	+	unprocessed_pseudogene	KNOWN	TMEM185AP1	1	3	0.340049
chrX	149774068	149776867	149775467	ENSG00000171116.7	+	protein_coding	KNOWN	HSFX1	1	2	0.481938
chrX	149781930	149787737	149784833	ENSG00000123584.7	+	protein_coding	KNOWN	MAGEA9	1	4	0.481938
chrX	149808214	149809155	149808684	ENSG00000224732.1	+	unprocessed_pseudogene	KNOWN	MAGEA7P	1	1	0.164504
chrX	149817170	149817644	149817407	ENSG00000229829.1	+	processed_pseudogene	KNOWN	DUTP4	1	1	0.422816
chrX	149825708	149879799	149852753	ENSG00000280752.1	+	lincRNA	KNOWN	LINC00850	1	3	0.145835
chrX	149878836	149881070	149879953	ENSG00000230899.1	-	antisense	KNOWN	MAGEA8-AS1	1	5	-0.185542
chrX	149881141	149885835	149883488	ENSG00000156009.9	+	protein_coding	KNOWN	MAGEA8	5	4	-0.185542
chrX	149929527	149938811	149934169	ENSG00000197021.8	-	protein_coding	KNOWN	CXorf40B	7	6	0.067308
chrX	149929662	149930698	149930180	ENSG00000224871.1	+	antisense	KNOWN	XX-FW81066F1.2	1	2	-0.003390
chrX	149938628	150224580	150081604	ENSG00000235703.5	+	antisense	KNOWN	LINC00894	9	15	0.373713
chrX	150114378	150116520	150115449	ENSG00000183171.5	+	processed_pseudogene	KNOWN	RP11-49C9.2	1	1	0.046188
chrX	150227982	150228091	150228036	ENSG00000252454.2	+	miRNA	KNOWN	MIR2114	1	1	0.453090
chrX	150231075	150232896	150231985	ENSG00000234825.3	-	processed_pseudogene	KNOWN	XRCC6P2	1	1	0.510493
chrX	150361422	150514178	150437800	ENSG00000013619.13	+	protein_coding	KNOWN	MAMLD1	7	8	0.361867
chrX	150489532	150489618	150489575	ENSG00000263713.1	-	miRNA	NOVEL	AC235953.1	1	1	0.650286
chrX	150568619	150673322	150620970	ENSG00000171100.14	+	protein_coding	KNOWN	MTM1	5	15	0.231422
chrX	150692971	150765103	150729037	ENSG00000063601.16	+	protein_coding	KNOWN	MTMR1	14	17	0.383760
chrX	150766337	150898816	150832576	ENSG00000102181.20	-	protein_coding	KNOWN	CD99L2	9	12	0.360864
chrX	150818753	150819246	150818999	ENSG00000228728.1	+	processed_pseudogene	KNOWN	RP11-316K19.3	1	1	0.091992
chrX	150915813	150920938	150918375	ENSG00000230153.5	+	lincRNA	KNOWN	AF003626.1	2	4	0.254930
chrX	150955494	150955587	150955540	ENSG00000222796.1	-	snRNA	KNOWN	RNU6-383P	1	1	0.676954
chrX	150980509	150990775	150985642	ENSG00000029993.14	+	protein_coding	KNOWN	HMGB3	5	5	0.546003
chrX	150993501	150994091	150993796	ENSG00000230508.1	+	processed_pseudogene	KNOWN	RPL19P21	1	1	-0.046985
chrX	151023607	151023722	151023664	ENSG00000270916.1	-	processed_pseudogene	KNOWN	RPL12P50	1	1	0.060283
chrX	151026295	151026406	151026350	ENSG00000212595.1	-	rRNA	NOVEL	5S_rRNA	1	1	0.060283
chrX	151168222	151168326	151168274	ENSG00000265789.1	+	miRNA	KNOWN	MIR4330	1	1	-0.333314
chrX	151175192	151177836	151176514	ENSG00000234696.1	-	antisense	KNOWN	GPR50-AS1	1	3	-0.039253
chrX	151176653	151181465	151179059	ENSG00000102195.8	+	protein_coding	KNOWN	GPR50	2	4	-0.039253
chrX	151182386	151182855	151182620	ENSG00000269993.1	+	lincRNA	KNOWN	AF003625.3	1	1	-0.039253
chrX	151226229	151227715	151226972	ENSG00000228717.1	-	processed_pseudogene	KNOWN	AF013593.1	1	1	-0.073067
chrX	151275509	151275789	151275649	ENSG00000278724.1	+	misc_RNA	NOVEL	Metazoa_SRP	1	1	-0.098339
chrX	151396515	151409364	151402939	ENSG00000160131.13	+	protein_coding	KNOWN	VMA21	3	4	0.376969
chrX	151497726	151498354	151498040	ENSG00000270052.1	+	lincRNA	KNOWN	WI2-80269A6.1	1	2	-0.695014
chrX	151515551	151516245	151515898	ENSG00000214915.3	+	lincRNA	KNOWN	XX-FW80269A6.1	1	2	-0.192985
chrX	151563622	151676739	151620180	ENSG00000166049.10	+	protein_coding	KNOWN	PASD1	2	16	-0.339377
chrX	151611664	151671196	151641430	ENSG00000239429.1	+	unprocessed_pseudogene	KNOWN	RP11-45D17.1	1	6	-0.444883
chrX	151695124	151705924	151700524	ENSG00000130032.15	+	protein_coding	KNOWN	PRRG3	5	4	0.215140
chrX	151716035	151723194	151719614	ENSG00000147378.11	+	protein_coding	KNOWN	FATE1	2	5	0.020201
chrX	151738451	151745304	151741877	ENSG00000183862.5	+	protein_coding	KNOWN	CNGA2	1	6	0.325789
chrX	151904431	151913968	151909199	ENSG00000229967.1	-	antisense	KNOWN	RP11-366F6.2	3	5	-0.083680
chrX	151912509	151925170	151918839	ENSG00000147381.11	+	protein_coding	KNOWN	MAGEA4	14	4	0.038880
chrX	151953124	151974680	151963902	ENSG00000102287.16	-	protein_coding	KNOWN	GABRE	12	9	0.139945
chrX	151956683	151956778	151956730	ENSG00000264120.1	-	miRNA	NOVEL	AF274855.1	1	1	0.138285
chrX	151958578	151958658	151958618	ENSG00000207621.1	-	miRNA	KNOWN	MIR224	1	1	0.138285
chrX	151959607	151959719	151959663	ENSG00000207753.2	-	miRNA	KNOWN	MIR452	1	1	0.138285
chrX	152045314	152046193	152045753	ENSG00000228965.1	-	processed_pseudogene	KNOWN	RPSAP60	1	1	-0.408437
chrX	152114599	152115540	152115069	ENSG00000242520.5	-	transcribed_unprocessed_pseudogene	KNOWN	MAGEA5	1	1	-0.075953
chrX	152114994	152138556	152126775	ENSG00000266560.5	-	processed_transcript	KNOWN	RP11-1007I13.4	3	7	0.063218
chrX	152133310	152138578	152135944	ENSG00000124260.11	-	protein_coding	KNOWN	MAGEA10	6	5	0.307260
chrX	152138883	152186857	152162870	ENSG00000231937.1	+	antisense	KNOWN	RP11-329E24.6	1	4	-0.034407
chrX	152166234	152451358	152308796	ENSG00000011677.12	-	protein_coding	KNOWN	GABRA3	4	10	-0.234687
chrX	152250572	152250676	152250624	ENSG00000252205.1	-	snRNA	KNOWN	RNU6-764P	1	1	0.074504
chrX	152392219	152392299	152392259	ENSG00000207957.1	-	miRNA	KNOWN	MIR105-1	1	1	-0.349714
chrX	152393413	152393523	152393468	ENSG00000211583.2	-	miRNA	KNOWN	MIR767	1	1	-0.349714
chrX	152394412	152394492	152394452	ENSG00000207818.1	-	miRNA	KNOWN	MIR105-2	1	1	-0.349714
chrX	152479577	152481024	152480300	ENSG00000223940.1	+	processed_pseudogene	KNOWN	KRT8P8	1	1	-0.387176
chrX	152638183	152657534	152647858	ENSG00000268089.2	+	protein_coding	KNOWN	GABRQ	1	9	0.018413
chrX	152682810	152683842	152683326	ENSG00000269475.2	+	unprocessed_pseudogene	KNOWN	CH17-38B12.4	1	2	0.006600
chrX	152698752	152702347	152700549	ENSG00000221867.8	+	protein_coding	KNOWN	MAGEA3	3	3	0.275214
chrX	152708261	152714549	152711405	ENSG00000268902.2	-	transcribed_unprocessed_pseudogene	KNOWN	CSAG2	2	5	0.308067
chrX	152714586	152718607	152716596	ENSG00000183305.13	+	protein_coding	KNOWN	MAGEA2B	11	6	0.320616
chrX	152727484	152733735	152730609	ENSG00000198930.12	-	protein_coding	KNOWN	CSAG1	4	5	0.301531
chrX	152733779	152737669	152735724	ENSG00000213401.8	+	protein_coding	KNOWN	MAGEA12	3	3	0.288684
chrX	152733827	152740985	152737406	ENSG00000242599.7	+	transcribed_unprocessed_pseudogene	KNOWN	CSAG4	2	4	0.288684
chrX	152746817	152747762	152747289	ENSG00000231447.1	+	antisense	KNOWN	RP1-14D6.7	1	2	0.288684
chrX	152749863	152753884	152751873	ENSG00000268606.5	-	protein_coding	KNOWN	MAGEA2	9	6	0.307467
chrX	152753921	152760222	152757071	ENSG00000268916.5	+	transcribed_processed_pseudogene	KNOWN	CSAG3	2	5	0.308125
chrX	152766136	152769747	152767941	ENSG00000197172.10	-	protein_coding	KNOWN	MAGEA6	4	4	0.308125
chrX	152826973	152830777	152828875	ENSG00000147400.8	-	protein_coding	KNOWN	CETN2	2	5	-0.218216
chrX	152830967	152869729	152850348	ENSG00000147383.10	+	protein_coding	KNOWN	NSDHL	3	9	0.277377
chrX	152914442	152973480	152943961	ENSG00000147394.18	+	protein_coding	KNOWN	ZNF185	12	24	0.764311
chrX	152988824	152994127	152991475	ENSG00000198883.11	-	protein_coding	KNOWN	PNMA5	5	4	0.565728
chrX	153028785	153030148	153029466	ENSG00000234200.2	+	unprocessed_pseudogene	KNOWN	U82671.8	1	1	0.238383
chrX	153052150	153052413	153052281	ENSG00000229979.1	-	processed_pseudogene	KNOWN	U82670.9	1	1	0.392387
chrX	153056409	153060467	153058438	ENSG00000183837.9	+	protein_coding	KNOWN	PNMA3	3	3	0.392387
chrX	153072482	153075018	153073750	ENSG00000235961.5	+	protein_coding	KNOWN	PNMA6A	1	2	1.225848
chrX	153075769	153076968	153076368	ENSG00000268883.2	-	unprocessed_pseudogene	KNOWN	PNMA6B	1	1	1.225848
chrX	153122145	153128323	153125234	ENSG00000224931.3	-	unprocessed_pseudogene	KNOWN	AC152010.1	1	2	0.301784
chrX	153179285	153183880	153181582	ENSG00000198681.6	+	protein_coding	KNOWN	MAGEA1	1	3	-0.002867
chrX	153196633	153196684	153196658	ENSG00000266108.1	+	miRNA	NOVEL	AC236972.1	1	1	0.799438
chrX	153203044	153205534	153204289	ENSG00000235219.1	+	unprocessed_pseudogene	KNOWN	CTC-233O10.1	1	3	0.799438
chrX	153225649	153230357	153228003	ENSG00000273877.4	+	lincRNA	KNOWN	RP11-635O16.2	2	4	0.058897
chrX	153249115	153249691	153249403	ENSG00000231600.1	-	unprocessed_pseudogene	KNOWN	AC151960.1	1	2	0.522626
chrX	153276841	153277803	153277322	ENSG00000278803.1	+	unprocessed_pseudogene	KNOWN	RP11-635O16.1	1	1	0.466840
chrX	153317681	153321822	153319751	ENSG00000225110.2	-	protein_coding	KNOWN	LL0XNC01-16G2.1	1	2	0.448926
chrX	153334155	153360110	153347132	ENSG00000063587.13	+	protein_coding	KNOWN	ZNF275	3	5	0.547781
chrX	153355733	153355956	153355844	ENSG00000232249.1	+	unprocessed_pseudogene	KNOWN	LL0XNC01-37G1.2	1	1	0.587200
chrX	153395640	153401420	153398530	ENSG00000214897.4	-	protein_coding	KNOWN	U82695.5	2	3	0.629020
chrX	153403844	153404141	153403992	ENSG00000265170.2	-	misc_RNA	KNOWN	RN7SL667P	1	1	0.629020
chrX	153418322	153426481	153422401	ENSG00000189420.8	+	protein_coding	KNOWN	ZFP92	1	4	1.073133
chrX	153444720	153470587	153457653	ENSG00000183479.12	-	protein_coding	KNOWN	TREX2	7	13	0.838203
chrX	153447666	153495516	153471591	ENSG00000213397.10	-	protein_coding	KNOWN	HAUS7	11	10	0.993352
chrX	153485856	153487088	153486472	ENSG00000224963.2	+	antisense	KNOWN	U82695.9	1	2	1.021602
chrX	153494939	153509554	153502246	ENSG00000182492.15	+	protein_coding	KNOWN	BGN	5	8	1.361690
chrX	153517676	153582939	153550307	ENSG00000067842.17	+	protein_coding	KNOWN	ATP2B3	7	21	1.457232
chrX	153587919	153600045	153593982	ENSG00000262919.7	-	protein_coding	KNOWN	FAM58A	9	5	0.994343
chrX	153599340	153604353	153601846	ENSG00000260081.1	+	antisense	KNOWN	RP11-66N11.8	2	2	0.934451
chrX	153604497	153605348	153604922	ENSG00000217889.3	-	processed_pseudogene	KNOWN	KRT18P48	1	1	0.934451
chrX	153606517	153606888	153606702	ENSG00000213391.3	+	processed_pseudogene	KNOWN	RP11-66N11.6	1	1	0.934451
chrX	153610694	153612925	153611809	ENSG00000228616.1	+	lincRNA	KNOWN	RP11-66N11.7	1	2	0.914454
chrX	153642492	153651326	153646909	ENSG00000130829.17	+	protein_coding	KNOWN	DUSP9	3	4	1.336228
chrX	153662162	153662692	153662427	ENSG00000237793.3	+	processed_pseudogene	KNOWN	RPL18AP16	1	1	1.006262
chrX	153666226	153666510	153666368	ENSG00000244335.3	+	misc_RNA	KNOWN	RN7SL687P	1	1	1.006262
chrX	153666422	153666511	153666466	ENSG00000281066.1	+	miRNA	NOVEL	U52111.1	1	1	1.006262
chrX	153669730	153689010	153679370	ENSG00000130822.15	-	protein_coding	KNOWN	PNCK	32	12	0.883167
chrX	153688099	153696593	153692346	ENSG00000130821.15	+	protein_coding	KNOWN	SLC6A8	10	13	1.334004
chrX	153700497	153724697	153712597	ENSG00000185825.15	-	protein_coding	KNOWN	BCAP31	8	8	1.260517
chrX	153724868	153744762	153734815	ENSG00000101986.11	+	protein_coding	KNOWN	ABCD1	3	10	1.116791
chrX	153735626	153766478	153751052	ENSG00000232725.1	-	antisense	KNOWN	U52111.14	2	3	0.936000
chrX	153764196	153779346	153771771	ENSG00000198753.11	+	protein_coding	KNOWN	PLXNB3	9	37	1.152791
chrX	153776412	153785732	153781072	ENSG00000184343.10	+	protein_coding	KNOWN	SRPK3	8	21	1.383041
chrX	153785766	153794523	153790144	ENSG00000067829.18	-	protein_coding	KNOWN	IDH3G	12	13	1.461608
chrX	153793516	153798505	153796010	ENSG00000180879.13	+	protein_coding	KNOWN	SSR4	12	7	1.535122
chrX	153802166	153830565	153816365	ENSG00000067840.12	-	protein_coding	KNOWN	PDZD4	9	8	1.255754
chrX	153841251	153841565	153841408	ENSG00000184844.6	+	processed_pseudogene	KNOWN	CYCSP45	1	1	1.231267
chrX	153861514	153909223	153885368	ENSG00000198910.12	-	protein_coding	KNOWN	L1CAM	17	29	1.381321
chrX	153880672	153888990	153884831	ENSG00000273769.4	+	processed_transcript	KNOWN	LCA10	2	8	1.761271
chrX	153902531	153907166	153904848	ENSG00000126895.13	+	protein_coding	KNOWN	AVPR2	5	4	1.339919
chrX	153907367	153934999	153921183	ENSG00000089820.15	-	protein_coding	KNOWN	ARHGAP4	24	23	1.351089
chrX	153929242	153935223	153932232	ENSG00000102030.15	-	protein_coding	KNOWN	NAA10	16	8	1.277761
chrX	153935263	153944691	153939977	ENSG00000102032.12	-	protein_coding	KNOWN	RENBP	10	11	1.263758
chrX	153947553	153971807	153959680	ENSG00000172534.13	-	protein_coding	KNOWN	HCFC1	4	26	1.808022
chrX	153969325	153970087	153969706	ENSG00000235802.1	+	antisense	KNOWN	HCFC1-AS1	1	2	1.859705
chrX	153972327	153983195	153977761	ENSG00000177854.7	+	protein_coding	KNOWN	TMEM187	3	2	1.605519
chrX	153981097	153981177	153981137	ENSG00000265176.1	+	miRNA	KNOWN	MIR3202-2	1	1	1.605519
chrX	154010500	154019980	154015240	ENSG00000184216.11	-	protein_coding	KNOWN	IRAK1	13	14	1.662947
chrX	154019920	154019995	154019957	ENSG00000211524.3	-	miRNA	KNOWN	MIR718	1	1	1.662947
chrX	154021573	154137103	154079338	ENSG00000169057.19	-	protein_coding	KNOWN	MECP2	21	5	1.005836
chrX	154144224	154159032	154151628	ENSG00000102076.9	+	protein_coding	KNOWN	OPN1LW	3	6	0.634718
chrX	154159357	154176349	154167853	ENSG00000277008.1	-	unprocessed_pseudogene	KNOWN	TEX28P2	1	3	0.809109
chrX	154182596	154196135	154189365	ENSG00000268221.5	+	protein_coding	KNOWN	OPN1MW	3	6	0.919161
chrX	154196471	154213487	154204979	ENSG00000274962.1	-	unprocessed_pseudogene	KNOWN	TEX28P1	1	3	0.723045
chrX	154219756	154233286	154226521	ENSG00000166160.9	+	protein_coding	KNOWN	OPN1MW2	3	6	1.166368
chrX	154233615	154251288	154242451	ENSG00000277009.1	-	unprocessed_pseudogene	KNOWN	CH17-128G5.1	1	3	1.038923
chrX	154257538	154271805	154264671	ENSG00000269433.3	+	protein_coding	KNOWN	OPN1MW3	1	6	1.254306
chrX	154271265	154295853	154283559	ENSG00000278057.4	-	protein_coding	KNOWN	TEX28	4	5	0.944217
chrX	154295671	154330350	154313010	ENSG00000007350.16	+	protein_coding	KNOWN	TKTL1	8	13	0.904669
chrX	154333960	154335037	154334498	ENSG00000231830.1	-	antisense	KNOWN	XX-FW83128A1.2	1	2	0.961408
chrX	154348524	154374638	154361581	ENSG00000196924.14	-	protein_coding	KNOWN	FLNA	19	48	2.088588
chrX	154379197	154381523	154380360	ENSG00000102119.10	+	protein_coding	KNOWN	EMD	9	6	2.003183
chrX	154389955	154409168	154399561	ENSG00000147403.16	+	protein_coding	KNOWN	RPL10	18	8	1.958827
chrX	154396878	154398816	154397847	ENSG00000280195.1	-	antisense	KNOWN	XX-FW83563B9.5	1	1	1.958725
chrX	154400281	154400415	154400348	ENSG00000207165.1	+	snoRNA	KNOWN	SNORA70	1	1	1.958725
chrX	154401238	154412112	154406675	ENSG00000013563.13	-	protein_coding	KNOWN	DNASE1L1	12	10	1.897498
chrX	154411518	154421726	154416622	ENSG00000102125.15	+	protein_coding	KNOWN	TAZ	24	11	1.643634
chrX	154424380	154428479	154426429	ENSG00000197180.2	-	lincRNA	KNOWN	CH17-340M24.3	1	2	1.643634
chrX	154428632	154436516	154432574	ENSG00000071553.16	+	protein_coding	KNOWN	ATP6AP1	10	10	1.630286
chrX	154436913	154443467	154440190	ENSG00000203879.11	+	protein_coding	KNOWN	GDI1	15	11	1.627486
chrX	154444126	154450654	154447390	ENSG00000071859.14	+	protein_coding	KNOWN	FAM50A	7	13	1.615400
chrX	154450320	154450386	154450353	ENSG00000276350.1	+	miRNA	KNOWN	MIR6858	1	1	1.507029
chrX	154458281	154477779	154468030	ENSG00000130827.6	+	protein_coding	KNOWN	PLXNA3	9	33	1.626495
chrX	154477769	154479257	154478513	ENSG00000196976.6	-	protein_coding	KNOWN	LAGE3	2	4	1.806431
chrX	154483717	154486670	154485193	ENSG00000102178.12	-	protein_coding	KNOWN	UBL4A	7	5	1.806431
chrX	154487306	154490690	154488998	ENSG00000126903.15	-	protein_coding	KNOWN	SLC10A3	5	4	1.616114
chrX	154495815	154496113	154495964	ENSG00000264484.2	-	misc_RNA	KNOWN	RN7SL697P	1	1	0.874400
chrX	154506159	154516242	154511200	ENSG00000071889.16	-	protein_coding	KNOWN	FAM3A	22	11	1.219410
chrX	154517840	154518631	154518235	ENSG00000261773.1	-	sense_overlapping	KNOWN	WI2-89031B12.1	1	1	1.431622
chrX	154531391	154547572	154539481	ENSG00000160211.15	-	protein_coding	KNOWN	G6PD	11	13	1.375446
chrX	154541199	154565046	154553122	ENSG00000269335.5	+	protein_coding	KNOWN	IKBKG	15	10	1.333194
chrX	154571248	154571960	154571604	ENSG00000279245.1	+	lincRNA	KNOWN	FAM223A	2	1	0.823653
chrX	154580926	154581998	154581462	ENSG00000273041.1	+	processed_pseudogene	KNOWN	ATF4P2	1	1	0.823653
chrX	154585143	154586821	154585982	ENSG00000268651.2	+	protein_coding	KNOWN	CTAG1A	2	5	0.823653
chrX	154605858	154605950	154605904	ENSG00000232155.1	+	processed_pseudogene	KNOWN	AF277315.19	1	1	1.038973
chrX	154617604	154619282	154618443	ENSG00000184033.12	-	protein_coding	KNOWN	CTAG1B	3	5	1.014455
chrX	154620096	154620171	154620133	ENSG00000273773.1	+	unprocessed_pseudogene	KNOWN	RP5-865E18.2	1	1	1.014455
chrX	154622428	154623500	154622964	ENSG00000213338.3	-	processed_pseudogene	KNOWN	ATF4P1	1	1	1.014455
chrX	154632470	154633182	154632826	ENSG00000272681.2	-	lincRNA	KNOWN	FAM223B	2	1	1.035408
chrX	154639978	154648275	154644126	ENSG00000275882.1	-	unprocessed_pseudogene	KNOWN	IKBKGP1	1	8	1.035408
chrX	154651972	154653579	154652775	ENSG00000126890.13	-	protein_coding	KNOWN	CTAG2	2	3	0.988369
chrX	154654546	154655325	154654935	ENSG00000226141.1	+	unprocessed_pseudogene	KNOWN	AF277315.13	1	2	0.988369
chrX	154658790	154659682	154659236	ENSG00000237619.1	-	unprocessed_pseudogene	KNOWN	OR3B1P	1	1	0.988369
chrX	154675249	154751583	154713416	ENSG00000160219.11	-	protein_coding	KNOWN	GAB3	6	10	0.326024
chrX	154762742	154777689	154770215	ENSG00000130826.15	+	protein_coding	KNOWN	DKC1	13	15	0.553989
chrX	154768528	154768659	154768593	ENSG00000206948.1	+	snoRNA	KNOWN	SNORA36A	1	1	0.252456
chrX	154768596	154768656	154768626	ENSG00000281135.1	+	miRNA	KNOWN	MIR664B	1	1	0.252456
chrX	154774998	154775126	154775062	ENSG00000206693.1	+	snoRNA	KNOWN	SNORA56	1	1	0.838543
chrX	154778684	154821007	154799845	ENSG00000130830.14	-	protein_coding	KNOWN	MPP1	18	13	0.677139
chrX	154817099	154817401	154817250	ENSG00000229237.2	-	processed_pseudogene	KNOWN	HMGN1P37	1	1	0.223236
chrX	154823348	154834662	154829005	ENSG00000203870.5	-	protein_coding	KNOWN	SMIM9	3	4	0.174477
chrX	154835788	155026940	154931364	ENSG00000185010.13	-	protein_coding	KNOWN	F8	5	26	0.011188
chrX	154884972	154885558	154885265	ENSG00000274183.1	+	protein_coding	KNOWN	H2AFB1	1	1	0.166760
chrX	154886349	154888061	154887205	ENSG00000277203.1	+	protein_coding	KNOWN	F8A1	1	1	0.166760
chrX	154887360	154887458	154887409	ENSG00000221533.1	-	miRNA	KNOWN	MIR1184-1	1	1	0.166760
chrX	154897561	154898092	154897826	ENSG00000224069.1	-	processed_pseudogene	KNOWN	CTD-2183H9.7	1	1	0.033693
chrX	154908885	154919103	154913994	ENSG00000237859.2	-	unprocessed_pseudogene	KNOWN	EEF1A1P31	1	2	-0.017251
chrX	154919578	154920182	154919880	ENSG00000233688.1	-	processed_pseudogene	KNOWN	CTD-2183H9.3	1	1	-0.023485
chrX	155025980	155060303	155043141	ENSG00000165775.17	+	protein_coding	KNOWN	FUNDC2	7	5	0.275600
chrX	155061622	155147937	155104779	ENSG00000214827.9	-	protein_coding	KNOWN	MTCP1	5	5	0.084525
chrX	155061622	155071362	155066492	ENSG00000182712.15	-	protein_coding	KNOWN	CMC4	2	3	0.407958
chrX	155071420	155123074	155097247	ENSG00000185515.14	+	protein_coding	KNOWN	BRCC3	10	12	0.083801
chrX	155137111	155156503	155146807	ENSG00000235991.4	+	unprocessed_pseudogene	KNOWN	RP11-143H17.1	1	8	0.040022
chrX	155197007	155239817	155218412	ENSG00000155959.10	+	protein_coding	KNOWN	VBP1	4	7	-0.060536
chrX	155212921	155213638	155213279	ENSG00000224978.1	-	processed_pseudogene	KNOWN	RP13-228J13.9	1	2	-0.074367
chrX	155258241	155264589	155261415	ENSG00000155961.4	-	protein_coding	KNOWN	RAB39B	1	2	-0.020902
chrX	155276211	155334657	155305434	ENSG00000155962.12	-	protein_coding	KNOWN	CLIC2	4	7	-0.165300
chrX	155290360	155291353	155290856	ENSG00000225008.1	-	processed_pseudogene	KNOWN	RP13-228J13.6	1	1	-0.478757
chrX	155292169	155293432	155292800	ENSG00000228986.1	+	processed_pseudogene	KNOWN	RP13-228J13.8	1	2	-0.478757
chrX	155310247	155310490	155310368	ENSG00000230491.1	+	processed_pseudogene	KNOWN	RP13-228J13.10	1	1	0.010308
chrX	155334858	155351957	155343407	ENSG00000224216.1	-	antisense	KNOWN	RP13-228J13.1	2	2	-0.110616
chrX	155348752	155349799	155349275	ENSG00000230578.3	+	transcribed_unprocessed_pseudogene	KNOWN	RP13-228J13.5	2	2	-0.113123
chrX	155380787	155381134	155380960	ENSG00000277858.1	+	protein_coding	KNOWN	H2AFB2	1	1	-0.037291
chrX	155382115	155383230	155382672	ENSG00000274791.1	+	protein_coding	KNOWN	F8A2	1	1	-0.037291
chrX	155383100	155383198	155383149	ENSG00000221190.1	-	miRNA	KNOWN	MIR1184-2	1	1	-0.037291
chrX	155456914	155458672	155457793	ENSG00000277150.1	-	protein_coding	KNOWN	F8A3	1	1	-0.165166
chrX	155457517	155457615	155457566	ENSG00000221603.1	+	miRNA	KNOWN	MIR1184-3	1	1	-0.165166
chrX	155459415	155460005	155459710	ENSG00000277745.1	-	protein_coding	KNOWN	H2AFB3	1	1	-0.165166
chrX	155466540	155611616	155539078	ENSG00000224533.4	+	antisense	KNOWN	TMLHE-AS1	2	4	-0.140538
chrX	155468286	155487046	155477666	ENSG00000225393.1	+	antisense	KNOWN	RP11-218L14.4	1	2	-0.093235
chrX	155490115	155669944	155580029	ENSG00000185973.10	-	protein_coding	KNOWN	TMLHE	6	8	-0.120927
chrX	155767812	155782459	155775135	ENSG00000168939.11	+	protein_coding	KNOWN	SPRY3	1	2	-0.239735
chrX	155828585	155829576	155829080	ENSG00000237801.6	-	processed_pseudogene	KNOWN	AMD1P2	1	1	-0.007544
chrX	155875636	155875885	155875760	ENSG00000237040.6	+	processed_pseudogene	KNOWN	DPH3P2	1	1	-0.449718
chrX	155881293	155943769	155912531	ENSG00000124333.15	+	protein_coding	KNOWN	VAMP7	6	8	-0.114167
chrX	155978992	155979325	155979158	ENSG00000228410.6	-	processed_pseudogene	KNOWN	TCEB1P24	1	1	-0.002130
chrX	155985370	155986249	155985809	ENSG00000223484.7	-	processed_pseudogene	KNOWN	TRPC6P	1	1	-0.002130
chrX	155997581	156010817	156004199	ENSG00000124334.17	+	protein_coding	KNOWN	IL9R	4	9	0.084363
chrX	156004218	156022236	156013227	ENSG00000270726.6	+	processed_transcript	KNOWN	AJ271736.10	1	4	0.527546
chrX	156014623	156016837	156015730	ENSG00000185203.12	-	antisense	KNOWN	WASIR1	1	2	0.757874
chrX	156020826	156025710	156023268	ENSG00000182484.15	+	transcribed_unprocessed_pseudogene	KNOWN	WASH6P	15	10	0.757874
chrX	156022631	156022698	156022664	ENSG00000276543.5	+	miRNA	NOVEL	AJ271736.1	1	1	0.757874
chrX	156025664	156027877	156026770	ENSG00000227159.8	-	unprocessed_pseudogene	KNOWN	DDX11L16	1	5	0.757874
chrY	253743	255091	254417	ENSGR0000228572.7	+	unprocessed_pseudogene	KNOWN	LL0YNC03-29C1.1	1	1	0.572321
chrY	276322	303356	289839	ENSGR0000182378.13	+	protein_coding	KNOWN	PLCXD1	11	1	1.099127
chrY	304529	318819	311674	ENSGR0000178605.13	-	protein_coding	KNOWN	GTPBP6	2	1	0.911609
chrY	320990	321851	321420	ENSGR0000226179.6	+	antisense	KNOWN	LINC00685	1	1	1.020201
chrY	333963	386955	360459	ENSGR0000167393.17	-	protein_coding	KNOWN	PPP2R3B	10	1	1.036584
chrY	386980	405579	396279	ENSGR0000281849.3	+	antisense	KNOWN	RP13-465B17.4	1	1	0.837624
chrY	388100	388389	388244	ENSGR0000275287.5	-	misc_RNA	NOVEL	Metazoa_SRP	1	1	1.231267
chrY	419157	421980	420568	ENSGR0000280767.3	+	lincRNA	KNOWN	RP13-465B17.5	1	1	1.049557
chrY	523775	524102	523938	ENSGR0000234958.6	-	processed_pseudogene	KNOWN	FABP5P13	1	1	0.832605
chrY	545236	545352	545294	ENSGR0000229232.6	-	processed_pseudogene	KNOWN	KRT18P53	1	1	0.322772
chrY	624344	659411	641877	ENSGR0000185960.13	+	protein_coding	KNOWN	SHOX	4	1	0.988494
chrY	990221	994365	992293	ENSGR0000237531.6	+	lincRNA	KNOWN	RP11-309M23.1	1	1	0.139689
chrY	1008503	1010101	1009302	ENSGR0000225661.7	-	processed_pseudogene	KNOWN	RPL14P5	1	1	0.162617
chrY	1187549	1212750	1200149	ENSGR0000205755.11	-	protein_coding	KNOWN	CRLF2	4	1	0.615646
chrY	1268800	1310381	1289590	ENSGR0000198223.15	+	protein_coding	KNOWN	CSF2RA	20	1	0.626701
chrY	1291755	1291828	1291791	ENSGR0000264510.6	+	miRNA	NOVEL	BX649553.3	1	1	0.806590
chrY	1292094	1292167	1292130	ENSGR0000264819.6	+	miRNA	NOVEL	BX649553.4	1	1	0.806590
chrY	1293615	1293689	1293652	ENSGR0000263980.6	+	miRNA	NOVEL	BX649553.2	1	1	0.806590
chrY	1293918	1293992	1293955	ENSGR0000265658.6	+	miRNA	KNOWN	MIR3690	1	1	0.806590
chrY	1294132	1294206	1294169	ENSGR0000263835.6	+	miRNA	NOVEL	BX649553.1	1	1	0.806590
chrY	1300256	1300375	1300315	ENSGR0000223274.6	-	rRNA	KNOWN	RNA5SP498	1	1	0.806590
chrY	1336616	1382689	1359652	ENSGR0000185291.11	+	protein_coding	KNOWN	IL3RA	3	1	0.768236
chrY	1386152	1392724	1389438	ENSGR0000169100.13	-	protein_coding	KNOWN	SLC25A6	3	1	1.050383
chrY	1396427	1399402	1397914	ENSGR0000236871.7	+	lincRNA	KNOWN	LINC00106	2	1	1.091992
chrY	1401769	1414028	1407898	ENSGR0000236017.8	+	antisense	KNOWN	ASMTL-AS1	5	1	0.995123
chrY	1403139	1453762	1428450	ENSGR0000169093.15	-	protein_coding	KNOWN	ASMTL	6	1	0.878615
chrY	1462572	1537107	1499839	ENSGR0000182162.10	-	protein_coding	KNOWN	P2RY8	2	1	0.594343
chrY	1591593	1602514	1597053	ENSGR0000197976.11	+	protein_coding	KNOWN	AKAP17A	3	1	0.809058
chrY	1615001	1643081	1629041	ENSGR0000196433.12	+	protein_coding	KNOWN	ASMT	5	1	0.444232
chrY	1732584	1755985	1744284	ENSGR0000223511.6	+	lincRNA	KNOWN	RP13-297E16.4	2	1	0.015799
chrY	1767347	1768776	1768061	ENSGR0000234622.6	+	lincRNA	KNOWN	RP13-297E16.5	1	1	-0.158970
chrY	2219516	2502805	2361160	ENSGR0000169084.13	-	protein_coding	KNOWN	DHRSX	7	1	0.430207
chrY	2334295	2336410	2335352	ENSGR0000223571.6	-	sense_intronic	KNOWN	DHRSX-IT1	1	1	0.360188
chrY	2486414	2500967	2493690	ENSGR0000214717.10	-	protein_coding	KNOWN	ZBED1	5	1	0.388637
chrY	2609191	2609254	2609222	ENSGR0000277120.5	+	miRNA	KNOWN	MIR6089	1	1	0.321017
chrY	2609348	2657229	2633288	ENSGR0000223773.7	+	transcribed_unprocessed_pseudogene	KNOWN	CD99P1	5	1	0.277990
chrY	2612988	2615347	2614167	ENSGR0000230542.6	-	lincRNA	KNOWN	LINC00102	1	1	0.189839
chrY	2691179	2741309	2716244	ENSGR0000002586.18	+	protein_coding	KNOWN	CD99	12	1	0.703281
chrY	2784749	2784853	2784801	ENSG00000251841.1	+	snRNA	KNOWN	RNU6-1334P	1	1	0.157283
chrY	2786855	2787699	2787277	ENSG00000184895.7	-	protein_coding	KNOWN	SRY	1	1	0.157283
chrY	2789827	2790328	2790077	ENSG00000237659.1	+	processed_pseudogene	KNOWN	RNASEH2CP1	1	1	-0.044886
chrY	2827982	2828218	2828100	ENSG00000232195.1	+	processed_pseudogene	KNOWN	TOMM22P2	1	1	-0.048871
chrY	2841486	2932000	2886743	ENSG00000129824.15	+	protein_coding	KNOWN	RPS4Y1	4	1	0.245276
chrY	2881683	2883652	2882667	ENSG00000227289.1	-	unprocessed_pseudogene	KNOWN	HSFY3P	1	1	0.286370
chrY	2929001	2931120	2930060	ENSG00000229163.2	-	processed_pseudogene	KNOWN	NAP1L1P2	1	1	0.110267
chrY	2934406	2934771	2934588	ENSG00000278847.1	-	lincRNA	KNOWN	RP11-414C23.1	1	1	0.027141
chrY	2935281	2982506	2958893	ENSG00000067646.11	+	protein_coding	KNOWN	ZFY	7	1	0.104786
chrY	2966844	3002626	2984735	ENSG00000233070.1	-	antisense	KNOWN	ZFY-AS1	2	1	0.051684
chrY	2995067	2995273	2995170	ENSG00000223600.1	-	processed_pseudogene	KNOWN	EEF1A1P41	1	1	0.144459
chrY	3002912	3102272	3052592	ENSG00000231535.5	+	lincRNA	KNOWN	LINC00278	2	1	-0.125343
chrY	3293808	3294826	3294317	ENSG00000234652.1	+	processed_pseudogene	KNOWN	AGPAT5P1	1	1	-0.244292
chrY	3549652	3549810	3549731	ENSG00000216777.1	-	processed_pseudogene	KNOWN	PRRC2CP1	1	1	-0.568920
chrY	3579041	3580041	3579541	ENSG00000176679.8	+	protein_coding	KNOWN	TGIF2LY	2	1	-0.864939
chrY	3630144	3630229	3630186	ENSG00000277537.1	+	miRNA	NOVEL	AC019058.1	1	1	-0.150369
chrY	3682805	3683868	3683336	ENSG00000232927.1	+	processed_pseudogene	KNOWN	USP12PY	1	1	-0.082506
chrY	3777997	3779546	3778771	ENSG00000225653.1	-	processed_pseudogene	KNOWN	RNF19BPY	1	1	0.069624
chrY	3851224	3852869	3852046	ENSG00000218410.1	-	processed_pseudogene	KNOWN	AC012078.2	1	1	-0.312398
chrY	3866306	3866722	3866514	ENSG00000229518.1	-	processed_pseudogene	KNOWN	UBE2V1P3	1	1	-0.312398
chrY	4036497	4100320	4068408	ENSG00000229308.1	+	lincRNA	KNOWN	AC010084.1	1	1	-0.483635
chrY	4174985	4175090	4175037	ENSG00000252900.1	-	snRNA	KNOWN	RNU6-303P	1	1	-1.137490
chrY	4801685	4802848	4802266	ENSG00000225878.1	-	processed_pseudogene	KNOWN	SERBP1P2	1	1	-0.793837
chrY	4993858	4999650	4996754	ENSG00000277930.1	-	lincRNA	KNOWN	RP11-122L9.1	2	1	0.038880
chrY	5000226	5742224	5371225	ENSG00000099715.14	+	protein_coding	KNOWN	PCDH11Y	7	1	-0.432823
chrY	5019076	5019266	5019171	ENSG00000252468.1	+	snRNA	KNOWN	RNU2-57P	1	1	-0.016261
chrY	5207215	5208069	5207642	ENSG00000231341.1	-	processed_pseudogene	KNOWN	VDAC1P6	1	1	-0.360520
chrY	5337745	5338964	5338354	ENSG00000235001.3	-	processed_pseudogene	KNOWN	EIF4A1P2	1	1	-0.118775
chrY	5573145	5574431	5573788	ENSG00000214207.2	+	processed_pseudogene	KNOWN	KRT18P10	1	1	-0.986011
chrY	5573928	5574019	5573973	ENSG00000252059.2	+	miRNA	NOVEL	AC012667.1	1	1	-0.986011
chrY	5634480	5634655	5634567	ENSG00000278585.1	-	processed_pseudogene	KNOWN	SNX3P1Y	1	1	-0.510044
chrY	5793300	5793737	5793518	ENSG00000235175.1	-	processed_pseudogene	KNOWN	RPL26P37	1	1	-0.708239
chrY	5874246	5874338	5874292	ENSG00000251879.2	+	miRNA	NOVEL	AC010874.1	1	1	-0.492971
chrY	6158802	6159265	6159033	ENSG00000237195.1	+	processed_pseudogene	KNOWN	DLGAP5P1	1	1	-0.318096
chrY	6241768	6243629	6242698	ENSG00000251275.1	-	unprocessed_pseudogene	KNOWN	AC006335.2	1	1	-0.180380
chrY	6242446	6243610	6243028	ENSG00000237069.2	-	lincRNA	KNOWN	TTTY23B	1	1	-0.180380
chrY	6243295	6245283	6244289	ENSG00000250204.1	-	unprocessed_pseudogene	KNOWN	AC006335.6	1	1	-0.180380
chrY	6246223	6249019	6247621	ENSG00000168757.12	+	protein_coding	KNOWN	TSPY2	5	1	-0.180380
chrY	6256267	6263953	6260110	ENSG00000234830.7	-	transcribed_unprocessed_pseudogene	KNOWN	FAM197Y9	3	1	-0.109148
chrY	6266593	6269275	6267934	ENSG00000238235.1	+	unprocessed_pseudogene	KNOWN	TSPY11P	1	1	-0.109148
chrY	6273579	6274065	6273822	ENSG00000275352.1	-	unprocessed_pseudogene	KNOWN	RP11-492C2.1	1	1	-0.143896
chrY	6303957	6305074	6304515	ENSG00000234583.1	-	unprocessed_pseudogene	KNOWN	TSPY19P	1	1	-0.181027
chrY	6306042	6307920	6306981	ENSG00000235094.2	+	unprocessed_pseudogene	KNOWN	AC006335.10	1	1	-0.181027
chrY	6307710	6309587	6308648	ENSG00000242879.1	+	unprocessed_pseudogene	KNOWN	AC006335.11	1	1	-0.181027
chrY	6328052	6343323	6335687	ENSG00000223744.1	+	unprocessed_pseudogene	KNOWN	RBMY2GP	1	1	-0.607956
chrY	6357219	6361413	6359316	ENSG00000229643.1	-	lincRNA	KNOWN	LINC00280	1	1	0.238213
chrY	6390431	6411564	6400997	ENSG00000129816.5	+	lincRNA	KNOWN	TTTY1B	1	1	-0.060019
chrY	6406244	6424145	6415194	ENSG00000212856.5	-	lincRNA	KNOWN	TTTY2B	1	1	-0.119587
chrY	6443434	6447077	6445255	ENSG00000237563.1	+	lincRNA	KNOWN	TTTY21B	1	1	0.105167
chrY	6449468	6457906	6453687	ENSG00000147753.9	+	lincRNA	KNOWN	TTTY7	3	1	-0.375312
chrY	6470773	6473630	6472201	ENSG00000185700.10	-	lincRNA	KNOWN	TTTY8B	2	1	-0.261645
chrY	6492976	6496757	6494866	ENSG00000235895.1	-	unprocessed_pseudogene	KNOWN	AC010154.2	1	1	-0.332506
chrY	6520463	6520929	6520696	ENSG00000232620.1	+	unprocessed_pseudogene	KNOWN	TSPY17P	1	1	-0.500584
chrY	6718962	6719180	6719071	ENSG00000224953.1	-	processed_pseudogene	KNOWN	SRIP3	1	1	-0.428840
chrY	6789153	6789344	6789248	ENSG00000274365.1	+	processed_pseudogene	KNOWN	RP11-507A3.1	1	1	-0.014923
chrY	6837707	6838252	6837979	ENSG00000233634.1	+	processed_pseudogene	KNOWN	GOT2P5	1	1	-0.479165
chrY	6865918	6874027	6869972	ENSG00000099721.13	-	protein_coding	KNOWN	AMELY	2	1	-0.230901
chrY	6900753	6901372	6901062	ENSG00000237701.1	+	processed_pseudogene	KNOWN	ATP5JP1	1	1	-0.624215
chrY	6910686	7091683	7001184	ENSG00000092377.13	+	protein_coding	KNOWN	TBL1Y	3	1	0.006720
chrY	6918682	6920791	6919736	ENSG00000273906.1	+	sense_intronic	KNOWN	RP11-115H13.1	1	1	-0.045512
chrY	7100733	7106502	7103617	ENSG00000232583.1	-	unprocessed_pseudogene	KNOWN	GPR143P	1	1	0.002724
chrY	7273972	7381548	7327760	ENSG00000099725.14	+	transcribed_unprocessed_pseudogene	KNOWN	PRKY	4	1	0.310183
chrY	7324297	7324595	7324446	ENSG00000252633.1	-	misc_RNA	KNOWN	RN7SKP282	1	1	0.346309
chrY	7341531	7341642	7341586	ENSG00000251996.1	+	misc_RNA	NOVEL	Y_RNA	1	1	-0.125239
chrY	7378672	7378779	7378725	ENSG00000252155.1	+	snRNA	KNOWN	RNU6-941P	1	1	0.469227
chrY	7423054	7423158	7423106	ENSG00000252472.1	-	snRNA	KNOWN	RNU6-521P	1	1	0.063977
chrY	7656968	7657352	7657160	ENSG00000275280.1	+	processed_pseudogene	KNOWN	RP11-105L10.1	1	1	-0.277958
chrY	7671743	7676024	7673883	ENSG00000238073.1	-	unprocessed_pseudogene	KNOWN	RBMY2HP	1	1	0.177722
chrY	7678899	7681028	7679963	ENSG00000223422.1	+	unprocessed_pseudogene	KNOWN	AC007274.2	1	1	0.177722
chrY	7687739	7689548	7688643	ENSG00000236435.1	-	unprocessed_pseudogene	KNOWN	TSPY12P	1	1	0.177722
chrY	7690511	7692678	7691594	ENSG00000236690.2	+	unprocessed_pseudogene	KNOWN	AC007274.5	1	1	0.135493
chrY	7699357	7701247	7700302	ENSG00000225520.1	-	lincRNA	KNOWN	TTTY16	1	1	0.135493
chrY	7712985	7809261	7761123	ENSG00000234795.9	-	transcribed_unprocessed_pseudogene	KNOWN	RFTN1P1	2	1	0.133751
chrY	7804924	7810683	7807803	ENSG00000237048.2	+	lincRNA	KNOWN	TTTY12	1	1	0.062225
chrY	7845485	7846454	7845969	ENSG00000278854.1	-	processed_pseudogene	KNOWN	RP11-109F19.1	1	1	0.060283
chrY	7853686	7854876	7854281	ENSG00000215603.4	-	processed_pseudogene	KNOWN	ZNF92P1Y	1	1	-0.109642
chrY	7905536	7907303	7906419	ENSG00000273863.1	-	processed_pseudogene	KNOWN	RP11-108F14.1	1	1	-0.066270
chrY	7913422	7914090	7913756	ENSG00000244246.1	-	processed_pseudogene	KNOWN	ZNF736P8Y	1	1	-0.523667
chrY	7932997	7937640	7935318	ENSG00000229745.1	-	unprocessed_pseudogene	KNOWN	BPY2DP	1	1	-0.127575
chrY	7990987	7991806	7991396	ENSG00000241200.1	-	processed_pseudogene	KNOWN	ZNF736P7Y	1	1	0.114018
chrY	8068896	8070723	8069809	ENSG00000239893.1	-	processed_pseudogene	KNOWN	ZNF736P9Y	1	1	-0.045423
chrY	8127130	8144203	8135666	ENSG00000227204.1	+	unprocessed_pseudogene	KNOWN	RBMY2JP	1	1	-0.049248
chrY	8264449	8277188	8270818	ENSG00000225809.1	-	unprocessed_pseudogene	KNOWN	RBMY2KP	1	1	-0.356229
chrY	8280198	8282209	8281203	ENSG00000215601.3	+	unprocessed_pseudogene	KNOWN	TSPY24P	1	1	-0.540951
chrY	8350931	8352143	8351537	ENSG00000224634.1	+	processed_pseudogene	KNOWN	ZNF736P6Y	1	1	-0.098111
chrY	8363536	8363959	8363747	ENSG00000223955.1	-	processed_pseudogene	KNOWN	MTND6P1	1	1	-0.098111
chrY	8364032	8365150	8364591	ENSG00000234179.1	+	processed_pseudogene	KNOWN	MTCYBP1	1	1	-0.098111
chrY	8371663	8372030	8371846	ENSG00000226529.1	+	processed_pseudogene	KNOWN	MTND1P1	1	1	0.058044
chrY	8372241	8372710	8372475	ENSG00000234850.1	+	processed_pseudogene	KNOWN	MTND2P3	1	1	0.058044
chrY	8413037	8414054	8413545	ENSG00000227830.1	-	processed_pseudogene	KNOWN	TRIM60P3Y	1	1	-0.586080
chrY	8418791	8419900	8419345	ENSG00000216824.2	-	processed_pseudogene	KNOWN	ZNF736P10Y	1	1	-0.586080
chrY	8517364	8517748	8517556	ENSG00000275866.1	-	processed_pseudogene	KNOWN	RP11-17E15.1	1	1	0.270329
chrY	8549671	8748740	8649205	ENSG00000279435.1	-	protein_coding	KNOWN	AC064829.1	2	1	-0.138692
chrY	8638294	8644842	8641568	ENSG00000232348.2	+	lincRNA	KNOWN	LINC00279	1	1	0.106789
chrY	8683370	8683878	8683624	ENSG00000233699.1	-	lincRNA	KNOWN	TTTY18	1	1	-0.048186
chrY	8695281	8743495	8719388	ENSG00000279664.1	+	protein_coding	KNOWN	AC009491.2	1	1	-0.328900
chrY	8704472	8705283	8704877	ENSG00000232419.1	+	lincRNA	KNOWN	TTTY19	1	1	-0.281823
chrY	8710885	8745985	8728435	ENSG00000279547.1	+	protein_coding	KNOWN	AC009491.1	1	1	-0.332549
chrY	8783310	8817382	8800346	ENSG00000180910.7	-	lincRNA	KNOWN	TTTY11	1	1	-0.488280
chrY	8901203	8903276	8902239	ENSG00000228207.1	-	unprocessed_pseudogene	KNOWN	AC007967.2	1	1	-0.552913
chrY	8906224	8916073	8911148	ENSG00000173357.12	+	transcribed_unprocessed_pseudogene	KNOWN	AC007967.3	2	1	-0.351415
chrY	8931069	8931454	8931261	ENSG00000273731.1	-	processed_pseudogene	KNOWN	RP11-373F14.1	1	1	-0.200790
chrY	8971751	8974095	8972923	ENSG00000230025.1	-	unprocessed_pseudogene	KNOWN	AC007967.4	1	1	0.280064
chrY	9030594	9039988	9035291	ENSG00000231988.1	+	unprocessed_pseudogene	KNOWN	OFD1P3Y	1	1	0.107099
chrY	9166085	9167702	9166893	ENSG00000232235.1	-	processed_pseudogene	KNOWN	CDY3P	1	1	-0.317652
chrY	9183694	9185803	9184748	ENSG00000224408.1	+	unprocessed_pseudogene	KNOWN	USP9YP22	1	1	-0.414968
chrY	9189629	9204611	9197120	ENSG00000238154.1	-	unprocessed_pseudogene	KNOWN	USP9YP4	1	1	-0.566014
chrY	9230915	9231247	9231081	ENSG00000232924.1	+	processed_pseudogene	KNOWN	TCEB1P4	1	1	-0.606352
chrY	9311130	9322869	9316999	ENSG00000197038.6	-	unprocessed_pseudogene	KNOWN	RBMY1A3P	1	1	-0.471276
chrY	9325799	9326047	9325923	ENSG00000275310.1	+	processed_pseudogene	KNOWN	RP11-441G8.1	1	1	-0.471276
chrY	9329880	9334832	9332356	ENSG00000232808.1	-	antisense	KNOWN	TTTY20	1	1	0.110458
chrY	9337464	9340284	9338874	ENSG00000233803.8	+	protein_coding	KNOWN	TSPY4	4	1	0.124782
chrY	9347511	9356814	9352162	ENSG00000225560.6	-	transcribed_processed_pseudogene	KNOWN	FAM197Y8	3	1	0.050022
chrY	9357797	9380870	9369333	ENSG00000229549.8	+	protein_coding	KNOWN	TSPY8	5	1	0.041568
chrY	9367803	9377092	9372447	ENSG00000228383.6	-	transcribed_unprocessed_pseudogene	KNOWN	FAM197Y7	3	1	0.053261
chrY	9378122	9380871	9379496	ENSG00000188656.8	+	unprocessed_pseudogene	KNOWN	TSPY7P	1	1	0.062714
chrY	9388122	9397438	9392780	ENSG00000237802.6	-	transcribed_unprocessed_pseudogene	KNOWN	FAM197Y6	3	1	-0.017900
chrY	9398421	9401223	9399822	ENSG00000228927.9	+	protein_coding	KNOWN	TSPY3	4	1	-0.038241
chrY	9458613	9465974	9462293	ENSG00000225516.6	-	lincRNA	KNOWN	FAM197Y5	3	1	-0.083450
chrY	9466955	9490081	9478518	ENSG00000258992.5	+	protein_coding	KNOWN	TSPY1	4	1	-0.110549
chrY	9479053	9486239	9482646	ENSG00000274196.4	-	transcribed_unprocessed_pseudogene	KNOWN	FAM197Y4	2	1	-0.114953
chrY	9487286	9490081	9488683	ENSG00000238074.4	+	protein_coding	KNOWN	TSPY9P	1	1	-0.112824
chrY	9497287	9506566	9501926	ENSG00000230066.5	-	transcribed_unprocessed_pseudogene	KNOWN	FAM197Y3	3	1	-0.042386
chrY	9507596	9510175	9508885	ENSG00000270073.1	+	unprocessed_pseudogene	KNOWN	TSPY6P	1	1	-0.040479
chrY	9517599	9526897	9522248	ENSG00000234803.7	-	transcribed_unprocessed_pseudogene	KNOWN	FAM197Y2	3	1	-0.014445
chrY	9527880	9530682	9529281	ENSG00000236424.7	+	protein_coding	KNOWN	TSPY10	4	1	0.009668
chrY	9544917	9547147	9546032	ENSG00000224336.2	-	unprocessed_pseudogene	KNOWN	FAM197Y1	1	1	0.084478
chrY	9548108	9550681	9549394	ENSG00000236786.1	+	unprocessed_pseudogene	KNOWN	TSPY15P	1	1	0.083130
chrY	9610571	9621276	9615923	ENSG00000231436.1	-	unprocessed_pseudogene	KNOWN	RBMY3AP	1	1	-0.304898
chrY	9624183	9626352	9625267	ENSG00000234110.1	+	unprocessed_pseudogene	KNOWN	TSPY25P	1	1	-0.304898
chrY	9640249	9640716	9640482	ENSG00000226223.1	-	unprocessed_pseudogene	KNOWN	TSPY16P	1	1	-0.445665
chrY	9665229	9669010	9667119	ENSG00000232617.1	+	unprocessed_pseudogene	KNOWN	AC017019.1	1	1	-0.090872
chrY	9691100	9693957	9692528	ENSG00000183385.9	+	lincRNA	KNOWN	TTTY8	2	1	0.007600
chrY	9706824	9715262	9711043	ENSG00000147761.8	-	lincRNA	KNOWN	TTTY7B	3	1	-0.350775
chrY	9717653	9721296	9719474	ENSG00000228890.1	-	lincRNA	KNOWN	TTTY21	1	1	-0.566971
chrY	9740584	9758476	9749530	ENSG00000212855.5	+	lincRNA	KNOWN	TTTY2	1	1	-0.051533
chrY	9753156	9774289	9763722	ENSG00000129845.5	-	lincRNA	KNOWN	TTTY1	1	1	-0.044137
chrY	9801153	9813245	9807199	ENSG00000224075.1	+	lincRNA	KNOWN	TTTY22	1	1	-0.362283
chrY	9813315	9817513	9815414	ENSG00000228379.1	+	lincRNA	KNOWN	AC010891.2	1	1	-0.492971
chrY	9831418	9846696	9839057	ENSG00000229208.1	-	unprocessed_pseudogene	KNOWN	RBMY2NP	1	1	-0.558262
chrY	9868462	9868702	9868582	ENSG00000274445.1	-	processed_pseudogene	KNOWN	RP11-373F14.2	1	1	-0.654722
chrY	9869664	9870781	9870222	ENSG00000231874.3	+	unprocessed_pseudogene	KNOWN	TSPY18P	1	1	-0.347183
chrY	9905595	9908139	9906867	ENSG00000187657.6	-	unprocessed_pseudogene	KNOWN	TSPY13P	1	1	-0.270578
chrY	9910798	9911962	9911380	ENSG00000239225.1	+	lincRNA	KNOWN	TTTY23	1	1	0.119473
chrY	9951553	9959423	9955488	ENSG00000234950.1	+	unprocessed_pseudogene	KNOWN	RBMY2OP	1	1	-0.255932
chrY	10022489	10034187	10028338	ENSG00000236718.3	-	unprocessed_pseudogene	KNOWN	RBMY2QP	1	1	-0.259306
chrY	10036195	10038375	10037285	ENSG00000243643.1	+	unprocessed_pseudogene	KNOWN	TSPY20P	1	1	-0.339348
chrY	10066554	10069151	10067852	ENSG00000225685.1	-	transcribed_unprocessed_pseudogene	KNOWN	TSPY5P	2	1	-0.177195
chrY	10070131	10070409	10070270	ENSG00000278478.1	+	processed_pseudogene	KNOWN	RP11-160K17.1	1	1	-0.290728
chrY	10088026	10089586	10088806	ENSG00000235193.1	+	unprocessed_pseudogene	KNOWN	AC006987.4	1	1	-0.290728
chrY	10090410	10090528	10090469	ENSG00000251766.1	-	rRNA	KNOWN	RNA5SP518	1	1	-0.068899
chrY	10090802	10091207	10091004	ENSG00000235691.1	+	unprocessed_pseudogene	KNOWN	AC006987.5	1	1	-0.068899
chrY	10092875	10092993	10092934	ENSG00000252289.1	-	rRNA	KNOWN	RNA5SP519	1	1	-0.068899
chrY	10169788	10170314	10170051	ENSG00000226975.1	-	unprocessed_pseudogene	KNOWN	AC006987.6	1	1	-0.093045
chrY	10171590	10172725	10172157	ENSG00000231411.1	-	unprocessed_pseudogene	KNOWN	DUX4L31	1	1	0.054190
chrY	10173853	10174207	10174030	ENSG00000226061.1	+	unprocessed_pseudogene	KNOWN	PCMTD1P1	1	1	0.054190
chrY	10190377	10192298	10191337	ENSG00000237447.1	-	processed_pseudogene	KNOWN	CDC27P2	1	1	0.091992
chrY	10196372	10196484	10196428	ENSG00000251966.2	+	miRNA	NOVEL	AC010970.1	1	1	0.091992
chrY	10197256	10199103	10198179	ENSG00000225840.2	-	processed_pseudogene	KNOWN	AC010970.2	1	1	0.091992
chrY	10200155	10200306	10200230	ENSG00000251705.1	+	rRNA	KNOWN	RNA5-8SP6	1	1	0.091992
chrY	11042722	11042943	11042832	ENSG00000273858.1	-	processed_pseudogene	KNOWN	RP1-85D24.4	1	1	-0.044643
chrY	11085476	11086061	11085768	ENSG00000273693.1	-	processed_pseudogene	KNOWN	C2orf27AP1	1	1	0.106789
chrY	11107065	11107263	11107164	ENSG00000271365.1	-	processed_pseudogene	KNOWN	RP1-85D24.3	1	1	0.271068
chrY	11107389	11107596	11107492	ENSG00000271309.1	-	processed_pseudogene	KNOWN	RP1-85D24.2	1	1	0.271068
chrY	11107719	11107887	11107803	ENSG00000270570.1	-	processed_pseudogene	KNOWN	RP1-85D24.1	1	1	0.271068
chrY	11144250	11144492	11144371	ENSG00000274231.1	+	processed_pseudogene	KNOWN	RP11-131M6.1	1	1	-0.589254
chrY	11153858	11159013	11156435	ENSG00000278212.1	-	unprocessed_pseudogene	KNOWN	MAFIP	1	1	-0.166470
chrY	11173618	11173821	11173719	ENSG00000274502.1	+	processed_pseudogene	KNOWN	RP11-131M6.3	1	1	-0.300727
chrY	11178306	11178816	11178561	ENSG00000274162.1	+	processed_pseudogene	KNOWN	SNX18P1Y	1	1	-0.300727
chrY	11184683	11184764	11184723	ENSG00000263502.1	-	miRNA	NOVEL	AC134878.2	1	1	-0.300727
chrY	11184875	11184957	11184916	ENSG00000252855.1	-	miRNA	NOVEL	AC134878.1	1	1	-0.300727
chrY	11306918	11308181	11307549	ENSG00000258567.1	+	unprocessed_pseudogene	KNOWN	DUX4L16	1	1	0.138308
chrY	11308274	11308351	11308312	ENSG00000273534.1	+	miRNA	NOVEL	AC134882.1	1	1	0.138308
chrY	11314921	11316187	11315554	ENSG00000259154.1	+	unprocessed_pseudogene	KNOWN	DUX4L17	1	1	0.062204
chrY	11316278	11316360	11316319	ENSG00000276079.1	+	miRNA	NOVEL	AC134882.2	1	1	0.062204
chrY	11321557	11322823	11322190	ENSG00000259029.1	+	unprocessed_pseudogene	KNOWN	DUX4L18	1	1	0.062204
chrY	11332329	11333595	11332962	ENSG00000258991.1	+	unprocessed_pseudogene	KNOWN	DUX4L19	1	1	0.035096
chrY	11333688	11333771	11333729	ENSG00000277716.1	+	miRNA	NOVEL	AC134882.3	1	1	0.035096
chrY	11335627	11337693	11336660	ENSG00000270455.1	+	processed_pseudogene	KNOWN	PABPC1P5	1	1	0.035096
chrY	11340579	11385687	11363133	ENSG00000183704.7	-	unprocessed_pseudogene	KNOWN	SLC9B1P1	1	1	-0.270644
chrY	11395699	11397076	11396387	ENSG00000270242.1	+	processed_pseudogene	KNOWN	ACTR3BP1	1	1	-0.518966
chrY	11412548	11418716	11415632	ENSG00000275828.1	+	unprocessed_pseudogene	KNOWN	RP11-295P22.3	1	1	-0.213817
chrY	11445418	11445564	11445491	ENSG00000225433.3	-	unprocessed_pseudogene	KNOWN	MTND1P12	1	1	0.281963
chrY	11445708	11446101	11445904	ENSG00000224567.2	-	processed_pseudogene	KNOWN	RP11-295P22.4	1	1	0.281963
chrY	11473727	11474237	11473982	ENSG00000271375.1	-	processed_pseudogene	KNOWN	RP11-295P22.2	1	1	0.194172
chrY	11781052	11782527	11781789	ENSG00000234385.1	-	processed_pseudogene	KNOWN	RCC2P1	1	1	0.004529
chrY	11922536	11923769	11923152	ENSG00000215583.3	-	processed_pseudogene	KNOWN	ASS1P6	1	1	-0.283048
chrY	11957208	11987386	11972297	ENSG00000235649.2	+	unprocessed_pseudogene	KNOWN	MXRA5Y	1	1	-0.207115
chrY	12244752	12245457	12245104	ENSG00000236477.1	+	processed_pseudogene	KNOWN	RPS24P1	1	1	-0.197515
chrY	12252321	12258033	12255177	ENSG00000232226.2	-	unprocessed_pseudogene	KNOWN	ARSFP1	1	1	-0.373672
chrY	12273473	12273764	12273618	ENSG00000243980.3	+	misc_RNA	KNOWN	RN7SL702P	1	1	-0.171043
chrY	12321623	12322835	12322229	ENSG00000232730.1	+	processed_pseudogene	KNOWN	FAM8A4P	1	1	0.210173
chrY	12339813	12347495	12343654	ENSG00000224060.3	+	transcribed_unprocessed_pseudogene	KNOWN	ARSEP1	2	1	-0.070947
chrY	12354096	12387328	12370712	ENSG00000225117.1	+	unprocessed_pseudogene	KNOWN	ARSDP1	1	1	0.480775
chrY	12354416	12420456	12387436	ENSG00000206159.10	-	transcribed_unprocessed_pseudogene	KNOWN	GYG2P1	5	1	0.365905
chrY	12440046	12507369	12473707	ENSG00000227447.1	-	unprocessed_pseudogene	KNOWN	XGY1	1	1	0.342901
chrY	12537773	12544883	12541328	ENSG00000226863.1	+	unprocessed_pseudogene	KNOWN	SHROOM2P1	1	1	0.478050
chrY	12618983	12634402	12626692	ENSG00000233774.1	-	unprocessed_pseudogene	KNOWN	MED14P1	1	1	0.280515
chrY	12662334	12692233	12677283	ENSG00000233864.7	+	lincRNA	KNOWN	TTTY15	3	1	0.318385
chrY	12701231	12860839	12781035	ENSG00000114374.12	+	protein_coding	KNOWN	USP9Y	5	1	0.136047
chrY	12801973	12803830	12802901	ENSG00000228411.1	-	processed_pseudogene	KNOWN	CDY4P	1	1	0.593390
chrY	12904108	12920478	12912293	ENSG00000067048.16	+	protein_coding	KNOWN	DDX3Y	9	1	-0.064083
chrY	12930165	12948182	12939173	ENSG00000234059.1	-	unprocessed_pseudogene	KNOWN	CASKP1	1	1	0.156122
chrY	13083790	13095805	13089797	ENSG00000224035.1	+	processed_pseudogene	KNOWN	SFPQP1	1	1	-0.096012
chrY	13153931	13162214	13158072	ENSG00000235462.1	-	transcribed_unprocessed_pseudogene	KNOWN	TAB3P1	2	1	-0.568522
chrY	13230884	13231439	13231161	ENSG00000223915.1	+	processed_pseudogene	KNOWN	DPPA2P1	1	1	0.011373
chrY	13248379	13480673	13364526	ENSG00000183878.15	-	protein_coding	KNOWN	UTY	16	1	0.120540
chrY	13286638	13287378	13287008	ENSG00000215414.4	+	processed_pseudogene	KNOWN	PSMA6P1	1	1	0.213554
chrY	13667960	13668056	13668008	ENSG00000252694.1	-	miRNA	NOVEL	AC006371.1	1	1	0.275704
chrY	13703567	13706024	13704795	ENSG00000154620.5	+	protein_coding	KNOWN	TMSB4Y	1	1	-0.189190
chrY	13751656	13915824	13833740	ENSG00000241859.6	+	transcribed_unprocessed_pseudogene	KNOWN	ANOS2P	3	1	-0.376985
chrY	13985772	13986513	13986142	ENSG00000129864.6	-	protein_coding	KNOWN	VCY	1	1	-0.171043
chrY	14056217	14056958	14056587	ENSG00000129862.6	+	protein_coding	KNOWN	VCY1B	1	1	-0.210037
chrY	14081075	14086600	14083837	ENSG00000235451.1	+	unprocessed_pseudogene	KNOWN	PNPLA4P1	1	1	-0.406462
chrY	14252185	14252291	14252238	ENSG00000266220.1	-	miRNA	NOVEL	AC010723.2	1	1	0.038880
chrY	14276212	14277489	14276850	ENSG00000223517.1	-	lincRNA	KNOWN	AC010723.1	1	1	-0.327722
chrY	14522638	14845650	14684144	ENSG00000165246.12	+	protein_coding	KNOWN	NLGN4Y	9	1	-0.127168
chrY	14639096	14640358	14639727	ENSG00000226555.1	+	processed_pseudogene	KNOWN	AGKP1	1	1	0.074918
chrY	14793642	14804033	14798837	ENSG00000228787.1	-	antisense	KNOWN	NLGN4Y-AS1	1	1	-0.085546
chrY	14907898	14908068	14907983	ENSG00000236131.1	+	processed_pseudogene	KNOWN	MED13P1	1	1	-0.118775
chrY	14941547	14941750	14941648	ENSG00000227949.1	-	processed_pseudogene	KNOWN	CYCSP46	1	1	-0.254459
chrY	14941746	14942715	14942230	ENSG00000224518.2	+	processed_pseudogene	KNOWN	AC006989.2	1	1	-0.254459
chrY	15348662	15456074	15402368	ENSG00000234620.1	-	unprocessed_pseudogene	KNOWN	PUDPP1	1	1	-0.071560
chrY	15547216	15593331	15570273	ENSG00000227166.1	+	unprocessed_pseudogene	KNOWN	STSP1	1	1	-0.051928
chrY	15935949	15936020	15935984	ENSG00000281069.1	+	miRNA	NOVEL	AC017020.2	1	1	-0.483868
chrY	16062766	16062829	16062797	ENSG00000252664.1	+	miRNA	NOVEL	AC017020.1	1	1	-0.819472
chrY	16138248	16138379	16138313	ENSG00000252689.1	-	snoRNA	NOVEL	SNORA20	1	1	-0.298468
chrY	16248935	16249041	16248988	ENSG00000252173.1	+	snRNA	KNOWN	RNU6-109P	1	1	-0.147474
chrY	16336283	16336389	16336336	ENSG00000252323.1	-	snRNA	KNOWN	RNU6-184P	1	1	-0.061483
chrY	17192826	17193652	17193239	ENSG00000228518.1	+	processed_pseudogene	KNOWN	SURF6P1	1	1	-0.022179
chrY	17464879	17465214	17465046	ENSG00000271595.1	-	processed_pseudogene	KNOWN	TCEB1P35	1	1	-0.047411
chrY	17500958	17515018	17507988	ENSG00000224989.2	+	lincRNA	KNOWN	FAM41AY1	1	1	0.147508
chrY	17514502	17516715	17515608	ENSG00000283076.1	+	transcribed_unprocessed_pseudogene	KNOWN	RP11-529I21.2	1	1	0.167543
chrY	17516836	17519038	17517937	ENSG00000228578.1	-	unprocessed_pseudogene	KNOWN	TUBB1P2	1	1	0.167543
chrY	17552800	17579754	17566277	ENSG00000230663.1	-	lincRNA	KNOWN	FAM224B	1	1	0.266455
chrY	17557864	17557976	17557920	ENSG00000252315.1	+	rRNA	KNOWN	RNA5SP520	1	1	0.015641
chrY	17559774	17559889	17559831	ENSG00000252012.1	+	rRNA	KNOWN	RNA5SP521	1	1	0.015641
chrY	17568962	17569051	17569006	ENSG00000273966.1	-	misc_RNA	NOVEL	pRNA	1	1	0.015641
chrY	17621259	17625832	17623545	ENSG00000238191.3	-	unprocessed_pseudogene	KNOWN	CLUHP1	1	1	0.428275
chrY	17623061	17623155	17623108	ENSG00000252038.1	-	miRNA	NOVEL	AC068704.1	1	1	0.428275
chrY	17628513	17629402	17628957	ENSG00000226353.1	+	processed_pseudogene	KNOWN	TAF9P1	1	1	0.428275
chrY	17705968	17708185	17707076	ENSG00000275578.1	-	unprocessed_pseudogene	KNOWN	RP11-357E16.1	1	1	-0.021964
chrY	17721598	17723177	17722387	ENSG00000226449.1	+	unprocessed_pseudogene	KNOWN	CDY5P	1	1	-0.323046
chrY	17726752	17727080	17726916	ENSG00000225896.1	+	processed_pseudogene	KNOWN	AC007742.3	1	1	-0.323046
chrY	17729528	17744596	17737062	ENSG00000224166.1	-	unprocessed_pseudogene	KNOWN	PRYP1	1	1	-0.594977
chrY	17757001	17758125	17757563	ENSG00000229129.1	-	processed_pseudogene	KNOWN	ACTG1P2	1	1	-0.299433
chrY	17768980	17777400	17773190	ENSG00000250868.4	-	transcribed_unprocessed_pseudogene	KNOWN	XKRY	2	1	-0.189640
chrY	17782210	17784815	17783512	ENSG00000223555.1	+	unprocessed_pseudogene	KNOWN	USP9YP23	1	1	-0.174523
chrY	17788315	17789484	17788899	ENSG00000235521.1	-	unprocessed_pseudogene	KNOWN	USP9YP27	1	1	-0.174523
chrY	17789003	17789162	17789082	ENSG00000252513.1	-	snRNA	KNOWN	RNU1-128P	1	1	-0.174523
chrY	17797983	17800696	17799339	ENSG00000224964.1	-	unprocessed_pseudogene	KNOWN	TRAPPC2P3	1	1	-0.521826
chrY	17809807	17825329	17817568	ENSG00000226011.1	+	unprocessed_pseudogene	KNOWN	OFD1P1Y	1	1	-0.244063
chrY	17837201	17837528	17837364	ENSG00000225740.1	-	processed_pseudogene	KNOWN	TCEB1P6	1	1	-0.512080
chrY	17877410	17880220	17878815	ENSG00000129873.6	-	protein_coding	KNOWN	CDY2B	2	1	-0.188116
chrY	17882099	17883708	17882903	ENSG00000229138.1	-	unprocessed_pseudogene	KNOWN	CDY6P	1	1	-0.188116
chrY	17908755	17910806	17909780	ENSG00000224485.1	+	unprocessed_pseudogene	KNOWN	USP9YP7	1	1	-0.244504
chrY	17912699	17921630	17917164	ENSG00000226116.1	-	unprocessed_pseudogene	KNOWN	USP9YP6	1	1	-0.462597
chrY	17951589	17953500	17952544	ENSG00000237558.1	+	unprocessed_pseudogene	KNOWN	CDY7P	1	1	-0.202191
chrY	17984349	17993260	17988804	ENSG00000233378.1	+	unprocessed_pseudogene	KNOWN	USP9YP34	1	1	0.037360
chrY	17995201	17997252	17996226	ENSG00000237616.1	-	unprocessed_pseudogene	KNOWN	USP9YP32	1	1	-0.274791
chrY	18022299	18023908	18023103	ENSG00000224033.1	+	unprocessed_pseudogene	KNOWN	CDY8P	1	1	-0.032188
chrY	18025787	18028597	18027192	ENSG00000182415.9	+	protein_coding	KNOWN	CDY2A	2	1	-0.032188
chrY	18068483	18068810	18068646	ENSG00000230412.1	+	processed_pseudogene	KNOWN	TCEB1P12	1	1	-0.145047
chrY	18080681	18096202	18088441	ENSG00000226611.2	-	unprocessed_pseudogene	KNOWN	OFD1P2Y	1	1	-0.185028
chrY	18105314	18108102	18106708	ENSG00000225895.1	+	unprocessed_pseudogene	KNOWN	TRAPPC2P8	1	1	-0.215437
chrY	18116527	18117695	18117111	ENSG00000233120.1	+	unprocessed_pseudogene	KNOWN	USP9YP15	1	1	-0.318096
chrY	18116848	18117007	18116927	ENSG00000252166.1	+	snRNA	KNOWN	RNU1-95P	1	1	-0.318096
chrY	18121195	18123799	18122497	ENSG00000232744.1	-	unprocessed_pseudogene	KNOWN	USP9YP16	1	1	-0.318096
chrY	18128610	18137029	18132819	ENSG00000244646.4	+	transcribed_unprocessed_pseudogene	KNOWN	XKRY2	2	1	-0.136528
chrY	18147884	18149008	18148446	ENSG00000229465.1	+	processed_pseudogene	KNOWN	ACTG1P11	1	1	-0.100653
chrY	18161366	18176484	18168925	ENSG00000231311.1	+	unprocessed_pseudogene	KNOWN	PRYP2	1	1	0.063916
chrY	18178932	18179260	18179096	ENSG00000236599.1	-	processed_pseudogene	KNOWN	TCEB1P26	1	1	-0.204625
chrY	18182835	18184414	18183624	ENSG00000232899.1	-	unprocessed_pseudogene	KNOWN	CDY9P	1	1	-0.204625
chrY	18276607	18277495	18277051	ENSG00000229302.1	-	processed_pseudogene	KNOWN	TAF9P2	1	1	-0.197515
chrY	18280178	18284761	18282469	ENSG00000228945.3	+	unprocessed_pseudogene	KNOWN	CLUHP2	1	1	-0.197515
chrY	18282853	18282947	18282900	ENSG00000252439.1	+	miRNA	NOVEL	AC007241.1	1	1	-0.197515
chrY	18326253	18353210	18339731	ENSG00000233522.1	+	lincRNA	KNOWN	FAM224A	1	1	0.065362
chrY	18336960	18337049	18337004	ENSG00000278391.1	+	misc_RNA	NOVEL	pRNA	1	1	0.091992
chrY	18346123	18346238	18346180	ENSG00000251953.1	-	rRNA	KNOWN	RNA5SP522	1	1	0.091992
chrY	18348035	18348147	18348091	ENSG00000252667.1	-	rRNA	KNOWN	RNA5SP523	1	1	0.091992
chrY	18386974	18389151	18388062	ENSG00000249726.1	+	unprocessed_pseudogene	KNOWN	TUBB1P1	1	1	-0.636706
chrY	18389297	18391510	18390403	ENSG00000282909.1	-	transcribed_unprocessed_pseudogene	KNOWN	RP11-157F24.1	1	1	-0.150551
chrY	18390994	18405046	18398020	ENSG00000226362.2	-	lincRNA	KNOWN	FAM41AY2	1	1	0.075313
chrY	18440797	18441125	18440961	ENSG00000225716.1	+	processed_pseudogene	KNOWN	TCEB1P13	1	1	-0.309107
chrY	18453150	18472137	18462643	ENSG00000229406.1	-	unprocessed_pseudogene	KNOWN	OFD1P4Y	1	1	-0.332714
chrY	18481087	18487400	18484243	ENSG00000227494.2	+	unprocessed_pseudogene	KNOWN	USP9YP14	1	1	-0.485984
chrY	18486511	18486672	18486591	ENSG00000252209.1	+	snRNA	KNOWN	RNU1-48P	1	1	-0.485984
chrY	18490915	18494295	18492605	ENSG00000249634.1	-	unprocessed_pseudogene	KNOWN	USP9YP5	1	1	-0.739409
chrY	18491740	18547698	18519719	ENSG00000251510.1	+	lincRNA	KNOWN	AC022486.1	1	1	-0.838806
chrY	18508577	18509068	18508822	ENSG00000238067.1	+	unprocessed_pseudogene	KNOWN	XKRYP1	1	1	-0.739409
chrY	18529358	18529623	18529490	ENSG00000233546.1	+	unprocessed_pseudogene	KNOWN	PRYP5	1	1	-1.229936
chrY	18532326	18532656	18532491	ENSG00000230377.1	-	processed_pseudogene	KNOWN	TCEB1P7	1	1	-0.499368
chrY	18540980	18544128	18542554	ENSG00000250951.1	+	unprocessed_pseudogene	KNOWN	USP9YP1	1	1	-0.499368
chrY	18546671	18588963	18567817	ENSG00000172468.13	+	protein_coding	KNOWN	HSFY1	4	1	-0.252295
chrY	18578417	18578560	18578488	ENSG00000230458.1	+	unprocessed_pseudogene	KNOWN	GPM6BP1	1	1	-0.063286
chrY	18581206	18590521	18585863	ENSG00000131007.9	-	antisense	KNOWN	TTTY9B	2	1	-0.062209
chrY	18582063	18629077	18605570	ENSG00000240438.2	-	unprocessed_pseudogene	KNOWN	OFD1P5Y	1	1	-0.245088
chrY	18649671	18650279	18649975	ENSG00000235479.1	+	unprocessed_pseudogene	KNOWN	RAB9AP4	1	1	-0.191807
chrY	18655520	18656190	18655855	ENSG00000249606.1	-	unprocessed_pseudogene	KNOWN	TRAPPC2P7	1	1	-0.216130
chrY	18674033	18739197	18706615	ENSG00000242153.7	+	transcribed_unprocessed_pseudogene	KNOWN	OFD1P6Y	2	1	-0.099372
chrY	18731440	18828662	18780051	ENSG00000169953.11	-	protein_coding	KNOWN	HSFY2	5	1	-0.461111
chrY	18741843	18741986	18741914	ENSG00000236429.1	-	unprocessed_pseudogene	KNOWN	GPM6BP2	1	1	-0.146168
chrY	18776279	18779427	18777853	ENSG00000249501.1	-	unprocessed_pseudogene	KNOWN	USP9YP2	1	1	-0.673543
chrY	18787750	18788080	18787915	ENSG00000228193.1	+	processed_pseudogene	KNOWN	TCEB1P14	1	1	-0.673543
chrY	18790709	18791051	18790880	ENSG00000248573.1	-	transcribed_unprocessed_pseudogene	KNOWN	PRYP6	1	1	-0.374326
chrY	18811338	18811829	18811583	ENSG00000230904.1	-	unprocessed_pseudogene	KNOWN	XKRYP2	1	1	-0.934480
chrY	18826107	18829487	18827797	ENSG00000238135.1	+	unprocessed_pseudogene	KNOWN	USP9YP10	1	1	-0.934480
chrY	18833002	18839313	18836157	ENSG00000224151.1	-	unprocessed_pseudogene	KNOWN	USP9YP28	1	1	-0.512080
chrY	18833729	18833890	18833809	ENSG00000251970.1	-	snRNA	KNOWN	RNU1-41P	1	1	-0.512080
chrY	18848264	18867280	18857772	ENSG00000238088.1	+	unprocessed_pseudogene	KNOWN	OFD1P7Y	1	1	-0.177990
chrY	18872102	18872272	18872187	ENSG00000217179.1	+	processed_pseudogene	KNOWN	MTCYBP2	1	1	-0.380496
chrY	18872501	19077416	18974958	ENSG00000176728.7	-	lincRNA	KNOWN	TTTY14	6	1	0.019316
chrY	18985175	18986398	18985786	ENSG00000217896.2	+	processed_pseudogene	KNOWN	ZNF839P1	1	1	0.146440
chrY	18992467	18992709	18992588	ENSG00000185275.6	-	processed_pseudogene	KNOWN	CD24P4	1	1	0.374027
chrY	19018983	19019087	19019035	ENSG00000252766.1	-	snRNA	KNOWN	RNU6-255P	1	1	-0.031997
chrY	19253960	19260875	19257417	ENSG00000274282.1	-	processed_pseudogene	KNOWN	RP11-118E9.1	1	1	-0.075465
chrY	19327569	19328573	19328071	ENSG00000234529.2	+	processed_pseudogene	KNOWN	GAPDHP19	1	1	-0.012345
chrY	19455431	19503153	19479292	ENSG00000215580.10	-	transcribed_unprocessed_pseudogene	KNOWN	BCORP1	3	1	0.100758
chrY	19567313	19606274	19586793	ENSG00000131002.11	+	transcribed_unprocessed_pseudogene	KNOWN	TXLNGY	14	1	-0.198648
chrY	19576009	19576182	19576095	ENSG00000279335.1	-	protein_coding	KNOWN	AC009977.1	1	1	-0.334273
chrY	19598188	19598757	19598472	ENSG00000267793.1	+	transcribed_processed_pseudogene	KNOWN	RP11-576C2.1	1	1	-0.093875
chrY	19691941	19694606	19693273	ENSG00000260197.1	-	lincRNA	KNOWN	RP11-424G14.1	1	1	-0.069289
chrY	19703865	19744939	19724402	ENSG00000012817.15	-	protein_coding	KNOWN	KDM5D	10	1	0.265953
chrY	19932130	19932500	19932315	ENSG00000274837.1	-	processed_pseudogene	KNOWN	RP11-356K22.1	1	1	-0.374576
chrY	19986575	19987852	19987213	ENSG00000237997.1	-	processed_pseudogene	KNOWN	RCC2P2	1	1	-0.025048
chrY	20001185	20012204	20006694	ENSG00000232522.1	-	unprocessed_pseudogene	KNOWN	ZNF886P	1	1	-0.070325
chrY	20390051	20396796	20393423	ENSG00000228764.1	+	processed_pseudogene	KNOWN	ZNF885P	1	1	-0.345414
chrY	20465668	20519228	20492448	ENSG00000229236.1	-	lincRNA	KNOWN	TTTY10	2	1	-0.325374
chrY	20570222	20570519	20570370	ENSG00000277438.1	-	processed_pseudogene	KNOWN	RP11-256K9.1	1	1	-0.113123
chrY	20575725	20593154	20584439	ENSG00000198692.9	+	protein_coding	KNOWN	EIF1AY	5	1	-0.075993
chrY	20727254	20742900	20735077	ENSG00000225624.1	+	unprocessed_pseudogene	KNOWN	TBL1YP1	1	1	-0.198214
chrY	20756164	20781032	20768598	ENSG00000280969.1	+	protein_coding	KNOWN	RPS4Y2	1	1	-0.298710
chrY	20808776	20811809	20810292	ENSG00000224482.1	-	unprocessed_pseudogene	KNOWN	HSFY4P	1	1	-0.280859
chrY	20843256	20843710	20843483	ENSG00000216844.1	-	processed_pseudogene	KNOWN	AC009494.3	1	1	-0.317652
chrY	20861337	20862337	20861837	ENSG00000229551.2	+	processed_pseudogene	KNOWN	GAPDHP17	1	1	-0.413244
chrY	20907344	20907562	20907453	ENSG00000226504.1	-	processed_pseudogene	KNOWN	TMEM167AP1	1	1	0.058044
chrY	21038289	21044724	21041506	ENSG00000254488.1	-	lincRNA	KNOWN	RP11-65G9.1	1	1	-0.200459
chrY	21130870	21131181	21131025	ENSG00000237427.1	+	processed_pseudogene	KNOWN	TOMM22P1	1	1	-0.577860
chrY	21221106	21222089	21221597	ENSG00000232634.1	-	processed_pseudogene	KNOWN	NEFLP1	1	1	-0.171043
chrY	21311268	21318895	21315081	ENSG00000226918.1	+	unprocessed_pseudogene	KNOWN	AC010086.1	1	1	-0.671568
chrY	21370918	21371003	21370960	ENSG00000216102.2	-	miRNA	NOVEL	AC010086.2	1	1	-0.188116
chrY	21382954	21386360	21384657	ENSG00000183146.4	-	protein_coding	KNOWN	PRORY	1	1	-0.188116
chrY	21394991	21401585	21398288	ENSG00000223637.7	-	transcribed_unprocessed_pseudogene	KNOWN	RBMY2EP	2	1	-0.550115
chrY	21405770	21405995	21405882	ENSG00000236615.1	+	unprocessed_pseudogene	KNOWN	AC010086.5	1	1	-0.550115
chrY	21430697	21437245	21433971	ENSG00000237269.1	-	unprocessed_pseudogene	KNOWN	RBMY2TP	1	1	-0.004870
chrY	21465384	21467163	21466273	ENSG00000235719.3	-	unprocessed_pseudogene	KNOWN	AC010141.1	1	1	0.316865
chrY	21468158	21470683	21469420	ENSG00000169849.8	+	unprocessed_pseudogene	KNOWN	TSPY14P	1	1	0.178751
chrY	21493519	21501968	21497743	ENSG00000169811.8	+	unprocessed_pseudogene	KNOWN	RBMY1HP	1	1	-1.005619
chrY	21508299	21510470	21509384	ENSG00000242393.1	-	unprocessed_pseudogene	KNOWN	AC010141.4	1	1	-0.797544
chrY	21511338	21549094	21530216	ENSG00000242875.6	+	protein_coding	KNOWN	RBMY1B	3	1	-0.169905
chrY	21511372	21549326	21530349	ENSG00000234414.7	+	protein_coding	KNOWN	RBMY1A1	4	1	-0.170753
chrY	21531839	21534011	21532925	ENSG00000228257.1	-	unprocessed_pseudogene	KNOWN	AC010141.6	1	1	-0.290478
chrY	21555852	21558070	21556961	ENSG00000227989.1	-	unprocessed_pseudogene	KNOWN	AC010141.8	1	1	-0.424132
chrY	21583600	21594666	21589133	ENSG00000184991.2	-	lincRNA	KNOWN	TTTY13	1	1	0.017095
chrY	21631683	21632015	21631849	ENSG00000271123.1	-	processed_pseudogene	KNOWN	TCEB1P5	1	1	-0.264152
chrY	21637475	21639041	21638258	ENSG00000226042.1	-	unprocessed_pseudogene	KNOWN	CDY10P	1	1	-0.264152
chrY	21661926	21674008	21667967	ENSG00000237023.1	+	unprocessed_pseudogene	KNOWN	USP9YP3	1	1	-0.203034
chrY	21677246	21681118	21679182	ENSG00000229416.1	-	unprocessed_pseudogene	KNOWN	USP9YP8	1	1	-0.409202
chrY	21696570	21698220	21697395	ENSG00000230029.1	+	unprocessed_pseudogene	KNOWN	CDY11P	1	1	-0.067486
chrY	21817579	21818218	21817898	ENSG00000277519.1	-	unprocessed_pseudogene	KNOWN	OFD1P16Y	1	1	-0.417022
chrY	21871331	21873550	21872440	ENSG00000229725.1	+	unprocessed_pseudogene	KNOWN	AC007322.1	1	1	-0.197515
chrY	21880076	21894526	21887301	ENSG00000244395.6	-	protein_coding	KNOWN	RBMY1D	3	1	-0.204649
chrY	21880076	21918067	21899071	ENSG00000242389.7	-	protein_coding	KNOWN	RBMY1E	4	1	-0.187989
chrY	21895394	21897559	21896476	ENSG00000251618.1	+	unprocessed_pseudogene	KNOWN	AC007322.3	1	1	-0.220286
chrY	21918935	21921106	21920020	ENSG00000227444.1	+	unprocessed_pseudogene	KNOWN	AC007322.5	1	1	-0.096212
chrY	21927521	21937150	21932335	ENSG00000226092.4	-	unprocessed_pseudogene	KNOWN	RBMY2AP	1	1	-0.146571
chrY	21940012	21941593	21940802	ENSG00000237968.1	+	unprocessed_pseudogene	KNOWN	AC007322.7	1	1	-0.164022
chrY	21972313	22005349	21988831	ENSG00000231159.1	+	unprocessed_pseudogene	KNOWN	OFD1P8Y	1	1	-0.429782
chrY	22048554	22049347	22048950	ENSG00000232475.1	-	unprocessed_pseudogene	KNOWN	HSFY5P	1	1	-0.309625
chrY	22049755	22058113	22053934	ENSG00000229553.1	-	unprocessed_pseudogene	KNOWN	USP9YP17	1	1	-0.676583
chrY	22064698	22065712	22065205	ENSG00000228850.1	+	unprocessed_pseudogene	KNOWN	CDY12P	1	1	-0.687618
chrY	22068820	22069151	22068985	ENSG00000232029.1	+	processed_pseudogene	KNOWN	TCEB1P15	1	1	-0.687618
chrY	22071756	22096007	22083881	ENSG00000169807.10	-	protein_coding	KNOWN	PRY2	2	1	-0.270387
chrY	22100814	22147484	22124149	ENSG00000236951.5	-	lincRNA	KNOWN	AC007359.6	2	1	-0.170991
chrY	22144966	22146831	22145898	ENSG00000131548.7	+	antisense	KNOWN	TTTY6B	1	1	-0.073067
chrY	22168542	22182982	22175762	ENSG00000169800.13	-	protein_coding	KNOWN	RBMY1F	3	1	-0.372840
chrY	22183850	22186021	22184935	ENSG00000229159.1	+	unprocessed_pseudogene	KNOWN	TSPY23P	1	1	-0.407579
chrY	22198429	22203712	22201070	ENSG00000225615.1	+	unprocessed_pseudogene	KNOWN	RBMY2UP	1	1	0.091992
chrY	22209331	22216580	22212955	ENSG00000229234.1	+	unprocessed_pseudogene	KNOWN	RBMY1KP	1	1	-0.479619
chrY	22296798	22298876	22297837	ENSG00000215560.2	-	lincRNA	KNOWN	TTTY5	1	1	-0.229936
chrY	22305925	22307951	22306938	ENSG00000229940.1	-	unprocessed_pseudogene	KNOWN	TSPY22P	1	1	-0.229936
chrY	22308823	22417881	22363352	ENSG00000226941.7	+	protein_coding	KNOWN	RBMY1J	4	1	-0.253870
chrY	22308859	22321825	22315342	ENSG00000243040.6	+	transcribed_unprocessed_pseudogene	KNOWN	RBMY2FP	2	1	-0.192772
chrY	22330452	22332500	22331476	ENSG00000259247.1	+	unprocessed_pseudogene	KNOWN	TTTY25P	1	1	0.091992
chrY	22400403	22402568	22401485	ENSG00000237902.1	-	unprocessed_pseudogene	KNOWN	TSPY21P	1	1	-0.492971
chrY	22438940	22485592	22462266	ENSG00000235059.5	+	lincRNA	KNOWN	AC008175.1	2	1	-0.131062
chrY	22439593	22441458	22440525	ENSG00000131538.7	-	lincRNA	KNOWN	TTTY6	1	1	-0.223210
chrY	22490397	22514637	22502517	ENSG00000169789.10	+	protein_coding	KNOWN	PRY	2	1	-0.371977
chrY	22517242	22517573	22517407	ENSG00000234131.1	-	processed_pseudogene	KNOWN	TCEB1P8	1	1	-0.216761
chrY	22520681	22521695	22521188	ENSG00000224873.1	-	unprocessed_pseudogene	KNOWN	CDY13P	1	1	-0.216761
chrY	22528281	22536639	22532460	ENSG00000230814.1	+	unprocessed_pseudogene	KNOWN	USP9YP24	1	1	-0.422469
chrY	22537047	22537849	22537448	ENSG00000228571.1	+	unprocessed_pseudogene	KNOWN	HSFY7P	1	1	-0.475693
chrY	22580989	22614081	22597535	ENSG00000230476.1	-	unprocessed_pseudogene	KNOWN	OFD1P9Y	1	1	-0.433551
chrY	22646031	22646327	22646179	ENSG00000273589.1	-	unprocessed_pseudogene	KNOWN	RP11-427G18.1	1	1	-0.583386
chrY	22649245	22658878	22654061	ENSG00000224657.9	+	transcribed_unprocessed_pseudogene	KNOWN	RBMY2BP	2	1	-0.493415
chrY	22670616	22672859	22671737	ENSG00000224917.1	-	unprocessed_pseudogene	KNOWN	AC016694.2	1	1	-0.462208
chrY	22762851	22769787	22766319	ENSG00000230727.1	-	unprocessed_pseudogene	KNOWN	RBMY2WP	1	1	-0.182868
chrY	22851584	22852715	22852149	ENSG00000228240.1	+	lincRNA	KNOWN	TTTY17A	1	1	-0.346129
chrY	22861112	22861834	22861473	ENSG00000276829.1	-	unprocessed_pseudogene	KNOWN	RP11-473E1.1	1	1	-0.346129
chrY	22866544	22867756	22867150	ENSG00000215537.3	-	processed_pseudogene	KNOWN	ZNF736P11Y	1	1	-0.346129
chrY	22936455	22973284	22954869	ENSG00000226906.1	+	lincRNA	KNOWN	TTTY4	1	1	-0.079594
chrY	22973819	23005465	22989642	ENSG00000183753.10	+	protein_coding	KNOWN	BPY2	4	1	-0.298920
chrY	23017063	23017821	23017442	ENSG00000244000.1	+	processed_pseudogene	KNOWN	AC006366.3	1	1	-0.195989
chrY	23025594	23026663	23026128	ENSG00000232764.1	+	processed_pseudogene	KNOWN	TRIM60P8Y	1	1	-0.195989
chrY	23049247	23051195	23050221	ENSG00000233126.3	+	processed_pseudogene	KNOWN	ZNF736P3Y	1	1	-0.432635
chrY	23058030	23059186	23058608	ENSG00000227251.1	+	processed_pseudogene	KNOWN	TRIM60P9Y	1	1	-0.560085
chrY	23129355	23199094	23164224	ENSG00000188120.14	-	protein_coding	KNOWN	DAZ1	6	1	-0.394954
chrY	23219434	23291356	23255395	ENSG00000205944.11	+	protein_coding	KNOWN	DAZ2	9	1	-0.633145
chrY	23379484	23392697	23386090	ENSG00000205936.3	+	unprocessed_pseudogene	KNOWN	PPP1R12BP2	1	1	-0.244456
chrY	23423099	23423236	23423167	ENSG00000251925.1	-	snoRNA	NOVEL	SNORA70	1	1	-0.440229
chrY	23462465	23472280	23467372	ENSG00000225189.1	+	unprocessed_pseudogene	KNOWN	REREP1Y	1	1	-0.409579
chrY	23523321	23525369	23524345	ENSG00000230073.1	+	unprocessed_pseudogene	KNOWN	AC009947.2	1	1	-0.644974
chrY	23537308	23546942	23542125	ENSG00000215540.10	-	transcribed_processed_pseudogene	KNOWN	RBMY2CP	2	1	-0.257158
chrY	23549809	23551385	23550597	ENSG00000236647.1	+	unprocessed_pseudogene	KNOWN	AC009947.5	1	1	-0.171315
chrY	23581595	23614640	23598117	ENSG00000225466.1	+	unprocessed_pseudogene	KNOWN	OFD1P10Y	1	1	-0.518874
chrY	23657839	23659058	23658448	ENSG00000224169.1	-	unprocessed_pseudogene	KNOWN	HSFY6P	1	1	-0.290256
chrY	23659466	23667822	23663644	ENSG00000223407.1	-	unprocessed_pseudogene	KNOWN	USP9YP18	1	1	-0.290256
chrY	23674379	23675392	23674885	ENSG00000226873.1	+	unprocessed_pseudogene	KNOWN	CDY14P	1	1	-0.345072
chrY	23678504	23678835	23678669	ENSG00000227915.1	+	unprocessed_pseudogene	KNOWN	TCEB1P16	1	1	-0.345072
chrY	23681440	23694579	23688009	ENSG00000169763.14	-	transcribed_unprocessed_pseudogene	KNOWN	PRYP3	2	1	-0.308317
chrY	23715922	23726808	23721365	ENSG00000236620.1	-	unprocessed_pseudogene	KNOWN	XKRYP3	1	1	-0.020902
chrY	23734193	23736249	23735221	ENSG00000224866.1	+	unprocessed_pseudogene	KNOWN	USP9YP25	1	1	-0.477864
chrY	23740258	23746693	23743475	ENSG00000232424.1	-	unprocessed_pseudogene	KNOWN	USP9YP29	1	1	-0.477864
chrY	23740942	23741105	23741023	ENSG00000252681.1	-	snRNA	KNOWN	RNU1-97P	1	1	-0.477864
chrY	23751188	23751760	23751474	ENSG00000232910.1	+	unprocessed_pseudogene	KNOWN	RAB9AP1	1	1	-0.428840
chrY	23762838	23765583	23764210	ENSG00000232845.1	-	unprocessed_pseudogene	KNOWN	TRAPPC2P9	1	1	-0.428840
chrY	23771232	23798150	23784691	ENSG00000237302.1	+	unprocessed_pseudogene	KNOWN	OFD1P11Y	1	1	-0.516929
chrY	23808821	23809059	23808940	ENSG00000231540.1	-	processed_pseudogene	KNOWN	TCEB1P9	1	1	-0.201739
chrY	23855522	23857091	23856306	ENSG00000223362.1	-	unprocessed_pseudogene	KNOWN	CDY15P	1	1	-0.238157
chrY	23917241	23917723	23917482	ENSG00000231026.1	-	unprocessed_pseudogene	KNOWN	XKRYP4	1	1	-0.358174
chrY	23919905	23921510	23920707	ENSG00000224571.1	+	unprocessed_pseudogene	KNOWN	USP9YP13	1	1	-0.358174
chrY	23934953	23940101	23937527	ENSG00000226369.1	+	unprocessed_pseudogene	KNOWN	USP9YP11	1	1	-0.328340
chrY	23936727	23941622	23939174	ENSG00000280961.1	-	lincRNA	KNOWN	TTTY3B	1	1	-0.328340
chrY	23945927	23952293	23949110	ENSG00000227871.1	-	unprocessed_pseudogene	KNOWN	USP9YP12	1	1	-0.318245
chrY	23946618	23946771	23946694	ENSG00000251917.1	-	snRNA	KNOWN	RNU1-86P	1	1	-0.328340
chrY	23956569	23960218	23958393	ENSG00000231423.1	+	unprocessed_pseudogene	KNOWN	RAB9AP5	1	1	-0.300326
chrY	23967564	23970694	23969129	ENSG00000228465.1	-	unprocessed_pseudogene	KNOWN	TRAPPC2P10	1	1	-0.301290
chrY	23972780	23995081	23983930	ENSG00000232585.1	+	unprocessed_pseudogene	KNOWN	OFD1P12Y	1	1	-0.257134
chrY	24006911	24007237	24007074	ENSG00000234081.1	-	processed_pseudogene	KNOWN	TCEB1P10	1	1	-0.096081
chrY	24045229	24048019	24046624	ENSG00000172352.5	-	protein_coding	KNOWN	CDY1B	2	1	-0.186984
chrY	24049878	24051487	24050682	ENSG00000231375.1	-	unprocessed_pseudogene	KNOWN	CDY17P	1	1	-0.160167
chrY	24077799	24079812	24078805	ENSG00000237467.1	+	unprocessed_pseudogene	KNOWN	USP9YP35	1	1	0.032491
chrY	24081704	24090346	24086025	ENSG00000229250.1	-	unprocessed_pseudogene	KNOWN	USP9YP31	1	1	0.006573
chrY	24104107	24106018	24105062	ENSG00000232205.1	+	unprocessed_pseudogene	KNOWN	CDY18P	1	1	-0.613001
chrY	24142358	24157843	24150100	ENSG00000235981.2	+	unprocessed_pseudogene	KNOWN	AC023274.4	1	1	-0.326053
chrY	24168187	24174494	24171340	ENSG00000223698.3	+	unprocessed_pseudogene	KNOWN	GOLGA6L11P	1	1	-0.031089
chrY	24172086	24172151	24172118	ENSG00000278844.1	+	miRNA	NOVEL	AC023274.1	1	1	0.077778
chrY	24179316	24183505	24181410	ENSG00000242854.1	-	unprocessed_pseudogene	KNOWN	DNM1P24	1	1	0.077778
chrY	24182477	24183071	24182774	ENSG00000230977.1	+	unprocessed_pseudogene	KNOWN	AC023274.6	1	1	0.077778
chrY	24183434	24187231	24185332	ENSG00000244231.1	-	processed_transcript	KNOWN	CSPG4P2Y	1	1	0.077778
chrY	24186509	24191870	24189189	ENSG00000172342.5	-	unprocessed_pseudogene	KNOWN	CSPG4P3Y	1	1	0.153109
chrY	24196425	24206144	24201284	ENSG00000279287.1	-	protein_coding	KNOWN	AC012005.4	1	1	0.293626
chrY	24209567	24215581	24212574	ENSG00000239533.6	-	transcribed_unprocessed_pseudogene	KNOWN	GOLGA2P2Y	2	1	0.106476
chrY	24210050	24210132	24210091	ENSG00000278686.1	-	miRNA	NOVEL	AC012005.2	1	1	0.091992
chrY	24210958	24211216	24211087	ENSG00000274234.1	-	misc_RNA	KNOWN	RN7SL818P	1	1	0.091992
chrY	24213354	24213419	24213386	ENSG00000277197.1	-	miRNA	NOVEL	AC012005.1	1	1	0.091992
chrY	24232826	24238984	24235905	ENSG00000225491.1	-	unprocessed_pseudogene	KNOWN	UBE2Q2P4Y	1	1	-0.386055
chrY	24276245	24277026	24276635	ENSG00000224827.1	+	processed_pseudogene	KNOWN	LINC00265-2P	1	1	-0.003767
chrY	24278337	24281140	24279738	ENSG00000233740.1	-	processed_pseudogene	KNOWN	CICP2	1	1	-0.003767
chrY	24278681	24291346	24285013	ENSG00000248792.1	+	unprocessed_pseudogene	KNOWN	LINC00266-2P	1	1	-0.041392
chrY	24362031	24362436	24362233	ENSG00000279274.1	-	protein_coding	KNOWN	AC012005.3	1	1	-0.229936
chrY	24396604	24403526	24400065	ENSG00000234399.1	-	unprocessed_pseudogene	KNOWN	RBMY2XP	1	1	-0.987443
chrY	24485332	24486463	24485897	ENSG00000227439.1	+	lincRNA	KNOWN	TTTY17B	1	1	-0.420821
chrY	24494709	24495583	24495146	ENSG00000224210.1	-	processed_pseudogene	KNOWN	TRIM60P5Y	1	1	-0.560085
chrY	24500263	24501505	24500884	ENSG00000232003.2	-	processed_pseudogene	KNOWN	ZNF736P12Y	1	1	-0.560085
chrY	24570202	24607025	24588613	ENSG00000235412.1	+	lincRNA	KNOWN	TTTY4B	1	1	-0.599267
chrY	24607560	24639207	24623383	ENSG00000183795.8	+	protein_coding	KNOWN	BPY2B	4	1	-0.174214
chrY	24650808	24651534	24651171	ENSG00000240566.1	+	processed_pseudogene	KNOWN	AC010153.3	1	1	-0.355467
chrY	24659337	24660406	24659871	ENSG00000232976.1	+	processed_pseudogene	KNOWN	TRIM60P10Y	1	1	-0.355467
chrY	24683657	24684935	24684296	ENSG00000226270.3	+	processed_pseudogene	KNOWN	ZNF736P2Y	1	1	-0.352793
chrY	24691791	24692932	24692361	ENSG00000227837.1	+	processed_pseudogene	KNOWN	TRIM60P11Y	1	1	-0.435255
chrY	24763069	24813492	24788280	ENSG00000187191.14	-	protein_coding	KNOWN	DAZ3	3	1	-0.437906
chrY	24833843	24907040	24870441	ENSG00000205916.11	+	protein_coding	KNOWN	DAZ4	7	1	-0.314351
chrY	24977176	24978317	24977746	ENSG00000278602.1	-	unprocessed_pseudogene	KNOWN	RP11-539D10.1	1	1	-0.471276
chrY	24985201	24986476	24985838	ENSG00000223978.1	-	processed_pseudogene	KNOWN	ZNF736P1Y	1	1	-0.471276
chrY	25009700	25010769	25010234	ENSG00000278197.1	-	unprocessed_pseudogene	KNOWN	RP11-539D10.2	1	1	-0.338518
chrY	25018499	25019303	25018901	ENSG00000230819.1	-	processed_pseudogene	KNOWN	ZNF736P5Y	1	1	-0.307278
chrY	25030901	25062548	25046724	ENSG00000185894.8	-	protein_coding	KNOWN	BPY2C	4	1	-0.264491
chrY	25063083	25099892	25081487	ENSG00000228296.1	-	lincRNA	KNOWN	TTTY4C	1	1	0.031082
chrY	25168599	25169841	25169220	ENSG00000236379.2	+	processed_pseudogene	KNOWN	ZNF736P4Y	1	1	-0.391217
chrY	25174520	25175237	25174878	ENSG00000274899.1	+	processed_pseudogene	KNOWN	RP11-566H16.1	1	1	-0.147679
chrY	25183643	25184773	25184208	ENSG00000223641.1	-	lincRNA	KNOWN	TTTY17C	1	1	-0.147679
chrY	25266584	25273531	25270057	ENSG00000227633.1	+	unprocessed_pseudogene	KNOWN	RBMY2YP	1	1	-0.362704
chrY	25307702	25308107	25307904	ENSG00000279115.1	+	protein_coding	KNOWN	AC006386.1	1	1	-0.257342
chrY	25378300	25394719	25386509	ENSG00000228786.5	-	lincRNA	KNOWN	LINC00266-4P	2	1	0.058275
chrY	25388992	25391811	25390401	ENSG00000233652.1	+	processed_pseudogene	KNOWN	CICP1	1	1	0.095166
chrY	25393154	25394056	25393605	ENSG00000233944.1	-	processed_pseudogene	KNOWN	LINC00265-3P	1	1	0.132256
chrY	25431156	25437315	25434235	ENSG00000223636.1	+	unprocessed_pseudogene	KNOWN	UBE2Q2P5Y	1	1	-0.119512
chrY	25454561	25460572	25457566	ENSG00000172297.7	+	unprocessed_pseudogene	KNOWN	GOLGA2P3Y	1	1	-0.013803
chrY	25456723	25456788	25456755	ENSG00000278258.1	+	miRNA	NOVEL	AC006328.3	1	1	-0.013803
chrY	25458926	25459184	25459055	ENSG00000278242.1	+	misc_RNA	KNOWN	RN7SL725P	1	1	-0.013803
chrY	25460010	25460092	25460051	ENSG00000252471.1	+	miRNA	NOVEL	AC006328.1	1	1	-0.013803
chrY	25463994	25473714	25468854	ENSG00000280301.1	+	protein_coding	KNOWN	AC006328.4	1	1	0.082070
chrY	25478269	25483630	25480949	ENSG00000172294.7	+	unprocessed_pseudogene	KNOWN	CSPG4P4Y	1	1	0.237042
chrY	25482908	25486705	25484806	ENSG00000240450.1	+	lincRNA	KNOWN	CSPG4P1Y	1	1	0.237042
chrY	25486640	25487322	25486981	ENSG00000239304.1	+	processed_pseudogene	KNOWN	DNM1P48	1	1	0.237042
chrY	25487284	25487662	25487473	ENSG00000233619.1	-	processed_pseudogene	KNOWN	AC006328.9	1	1	0.237042
chrY	25495651	25501958	25498804	ENSG00000197092.5	-	unprocessed_pseudogene	KNOWN	GOLGA6L16P	1	1	0.197174
chrY	25497994	25498059	25498026	ENSG00000273504.1	-	miRNA	NOVEL	AC006328.2	1	1	0.197174
chrY	25512301	25527786	25520043	ENSG00000235583.2	-	unprocessed_pseudogene	KNOWN	AC007562.1	1	1	-0.648921
chrY	25564122	25566033	25565077	ENSG00000237823.1	-	unprocessed_pseudogene	KNOWN	CDY19P	1	1	0.046668
chrY	25579790	25588444	25584117	ENSG00000229709.1	+	unprocessed_pseudogene	KNOWN	USP9YP36	1	1	-0.309625
chrY	25590323	25592345	25591334	ENSG00000232064.1	-	unprocessed_pseudogene	KNOWN	USP9YP33	1	1	-0.077933
chrY	25618644	25620253	25619448	ENSG00000225609.1	+	unprocessed_pseudogene	KNOWN	CDY20P	1	1	-0.260889
chrY	25622162	25624902	25623532	ENSG00000172288.7	+	protein_coding	KNOWN	CDY1	2	1	-0.260889
chrY	25662900	25663226	25663063	ENSG00000270535.1	+	processed_pseudogene	KNOWN	TCEB1P34	1	1	-0.261645
chrY	25675060	25697346	25686203	ENSG00000225287.1	-	unprocessed_pseudogene	KNOWN	OFD1P13Y	1	1	-0.334627
chrY	25699451	25702562	25701006	ENSG00000225256.1	+	unprocessed_pseudogene	KNOWN	TRAPPC2P5	1	1	-0.358174
chrY	25709908	25713557	25711732	ENSG00000223856.1	-	unprocessed_pseudogene	KNOWN	RAB9AP2	1	1	-0.332797
chrY	25723016	25724186	25723601	ENSG00000235004.1	+	unprocessed_pseudogene	KNOWN	USP9YP30	1	1	-0.332148
chrY	25723342	25723495	25723418	ENSG00000252426.1	+	snRNA	KNOWN	RNU1-107P	1	1	-0.332148
chrY	25728490	25733388	25730939	ENSG00000231141.1	+	lincRNA	KNOWN	TTTY3	1	1	-0.502742
chrY	25730011	25735160	25732585	ENSG00000232614.1	-	unprocessed_pseudogene	KNOWN	USP9YP9	1	1	-0.578701
chrY	25748596	25750206	25749401	ENSG00000225326.1	-	unprocessed_pseudogene	KNOWN	USP9YP19	1	1	-0.567679
chrY	25752388	25752870	25752629	ENSG00000223406.1	+	unprocessed_pseudogene	KNOWN	XKRYP5	1	1	-0.492971
chrY	25813013	25814566	25813789	ENSG00000229343.1	+	unprocessed_pseudogene	KNOWN	CDY22P	1	1	-0.323046
chrY	25860943	25861268	25861105	ENSG00000232695.1	+	processed_pseudogene	KNOWN	TCEB1P17	1	1	-0.364073
chrY	25871931	25898653	25885292	ENSG00000235511.1	-	unprocessed_pseudogene	KNOWN	OFD1P18Y	1	1	-0.445034
chrY	25904518	25907250	25905884	ENSG00000232914.1	+	unprocessed_pseudogene	KNOWN	TRAPPC2P4	1	1	-0.372971
chrY	25918323	25918895	25918609	ENSG00000223655.1	-	processed_pseudogene	KNOWN	RAB9AP3	1	1	-0.146520
chrY	25923388	25929826	25926607	ENSG00000230854.1	+	unprocessed_pseudogene	KNOWN	USP9YP20	1	1	-0.146520
chrY	25928979	25929142	25929060	ENSG00000252625.1	+	snRNA	KNOWN	RNU1-40P	1	1	-0.146520
chrY	25933833	25935881	25934857	ENSG00000227635.1	-	unprocessed_pseudogene	KNOWN	USP9YP21	1	1	-0.347293
chrY	25943268	25954152	25948710	ENSG00000237546.1	+	unprocessed_pseudogene	KNOWN	XKRYP6	1	1	-0.371414
chrY	25975549	25988069	25981809	ENSG00000172283.10	+	unprocessed_pseudogene	KNOWN	PRYP4	1	1	-0.207568
chrY	25991241	25991572	25991406	ENSG00000227867.1	-	processed_pseudogene	KNOWN	TCEB1P11	1	1	-0.199239
chrY	25994684	25995697	25995190	ENSG00000231716.1	-	unprocessed_pseudogene	KNOWN	CDY23P	1	1	-0.199239
chrY	26002254	26008856	26005555	ENSG00000234744.1	+	unprocessed_pseudogene	KNOWN	USP9YP26	1	1	-0.199239
chrY	26011435	26012237	26011836	ENSG00000233156.1	+	unprocessed_pseudogene	KNOWN	HSFY8P	1	1	-0.552677
chrY	26055779	26088493	26072136	ENSG00000234888.1	-	unprocessed_pseudogene	KNOWN	OFD1P15Y	1	1	-0.497055
chrY	26123674	26133308	26128491	ENSG00000215507.10	+	transcribed_processed_pseudogene	KNOWN	RBMY2DP	2	1	-0.260191
chrY	26198331	26208148	26203239	ENSG00000235014.1	-	unprocessed_pseudogene	KNOWN	REREP2Y	1	1	-0.460549
chrY	26244351	26244573	26244462	ENSG00000225876.1	-	unprocessed_pseudogene	KNOWN	AC024067.1	1	1	-0.437117
chrY	26247384	26247521	26247452	ENSG00000251796.1	+	snoRNA	NOVEL	SNORA70	1	1	-0.437117
chrY	26277923	26354418	26316170	ENSG00000229238.3	-	unprocessed_pseudogene	KNOWN	PPP1R12BP1	1	1	-0.463581
chrY	26360989	26361092	26361040	ENSG00000252948.1	+	snRNA	KNOWN	RNU6-1314P	1	1	-0.206532
chrY	26400611	26401230	26400920	ENSG00000233843.1	+	processed_pseudogene	KNOWN	CYCSP48	1	1	-0.358670
chrY	26409815	26420535	26415175	ENSG00000188399.5	+	unprocessed_pseudogene	KNOWN	ANKRD36P1	1	1	0.144603
chrY	26411059	26411158	26411108	ENSG00000275510.1	-	miRNA	NOVEL	AC013734.1	1	1	0.153392
chrY	26453982	26454092	26454037	ENSG00000277146.1	+	processed_pseudogene	KNOWN	RP11-557B9.1	1	1	-0.488294
chrY	26508213	26579690	26543951	ENSG00000215506.5	+	unprocessed_pseudogene	KNOWN	TPTE2P4	1	1	-0.428218
chrY	26549425	26549743	26549584	ENSG00000224240.1	+	processed_pseudogene	KNOWN	CYCSP49	1	1	-0.029024
chrY	26586642	26591601	26589121	ENSG00000227629.1	-	unprocessed_pseudogene	KNOWN	SLC25A15P1	1	1	0.041577
chrY	26594851	26634652	26614751	ENSG00000237917.1	-	unprocessed_pseudogene	KNOWN	PARP4P1	1	1	-0.003620
chrY	26626520	26627159	26626839	ENSG00000231514.1	-	processed_pseudogene	KNOWN	FAM58CP	1	1	-0.165166
chrY	56855244	56855488	56855366	ENSG00000235857.1	+	processed_pseudogene	KNOWN	CTBP2P1	1	1	-0.188222
chrY	56954332	56968979	56961655	ENSGR0000168939.11	+	protein_coding	KNOWN	SPRY3	1	1	-0.258915
chrY	57015105	57016096	57015600	ENSGR0000237801.6	-	processed_pseudogene	KNOWN	AMD1P2	1	1	-0.299433
chrY	57062156	57062405	57062280	ENSGR0000237040.6	+	processed_pseudogene	KNOWN	DPH3P2	1	1	-0.237316
chrY	57067813	57130289	57099051	ENSGR0000124333.15	+	protein_coding	KNOWN	VAMP7	6	1	-0.025545
chrY	57165512	57165845	57165678	ENSGR0000228410.6	-	processed_pseudogene	KNOWN	TCEB1P24	1	1	-0.098339
chrY	57171890	57172769	57172329	ENSGR0000223484.7	-	processed_pseudogene	KNOWN	TRPC6P	1	1	0.457641
chrY	57184101	57197337	57190719	ENSGR0000124334.17	+	protein_coding	KNOWN	IL9R	4	1	0.442310
chrY	57190738	57208756	57199747	ENSGR0000270726.6	+	processed_transcript	KNOWN	AJ271736.10	1	1	0.429988
chrY	57201143	57203357	57202250	ENSGR0000185203.12	-	antisense	KNOWN	WASIR1	1	1	0.429988
chrY	57207346	57212230	57209788	ENSGR0000182484.15	+	transcribed_unprocessed_pseudogene	KNOWN	WASH6P	15	1	0.565557
chrY	57209151	57209218	57209184	ENSGR0000276543.5	+	miRNA	NOVEL	AJ271736.1	1	1	0.429988
chrY	57212184	57214397	57213290	ENSGR0000227159.8	-	unprocessed_pseudogene	KNOWN	DDX11L16	1	1	0.726770
