Plotting principle component analysis (PCA)

Calculates principle component analysis (PCA) of all samples and creates a biplot which includes the position of each sample in terms of PC1 and PC2.

plotTssPCA(object, TSS.threshold =10)

# S4 method for TSSr
plotTssPCA(object, TSS.threshold = 10)

Arguments

object	A TSSr object.
TSS.threshold	Only TSSs with raw signal >= TSS.threshold will be included in PCA analysis

Examples

# \donttest{
plotTssPCA(exampleTSSr)
#> Plotting TSS PCA...
#> pdf 
#>   2 
# }