Supplemental Table S9: Documentation of SNPs in pre-adipocyte/adipocyte/adipose tissue open
chromatin peaks that overlap with transcription factor binding motifs.
chr, start, end: Coordinates for an LD SNP linked to the lead SNP (r 2 >0.8)
ensid, gene: ENSEMBL and gene identifiers
ref, alt: The reference and alternative allele at the LD site indicated by the chromosomal coordinates
ldSNP: The GTEx identifier for the LD SNP within the union ATAC peaks
leadSNP: The GTEx identifier for the lead variant associated with the gene indicated in the column ‘gene’
pvalue: The p-value for the lead association (interaction term)
beta: The lead effect size for the sex-by-SNP interaction
R2: The degree of LD between the lead SNP and LD SNP
ldrsid: The rs identifier for the LD variant
ntfs: The number of TF motifs overlapping the LD SNP
tfs: The identifiers for the TF motifs overlapping the LD SNP (from SNP2TFBS)
scorediff: The motif score differences corresponding to the TF motifs from ‘tfs’
- positive scores predict increased binding to the alternative allele (from SNP2TFBS)

chr	start	end	ensid	gene	ref	alt	ldSNP	leadSNP	pvalue	beta	R2	ldrsid	ntfs	tfs	scorediff
chr1	10378450	10378451	ENSG00000120948.16	TARDBP	C	G	chr1_10318393_C_G_b38	chr1_10213121_C_T_b38	8.25616446954671e-05	0.310538507496739	0.80081	rs6703602	2	Sox3,NFE2L1_MafG	-31,0
chr1	10737441	10737442	ENSG00000271895.2	RP4-635E18.8	C	A	chr1_10677385_C_A_b38	chr1_10682135_C_G_b38	6.74986415540583e-05	-0.170155324720285	0.925493	rs284311	1	ZNF263	300
chr1	151542625	151542626	ENSG00000143363.15	PRUNE1	T	C	chr1_151570150_T_C_b38	chr1_151570150_T_C_b38	6.94267141753803e-05	-0.20081197894745	1	rs1539490	1	Ddit3_Cebpa	-125
chr1	167522452	167522453	ENSG00000198771.10	RCSD1	C	T	chr1_167553216_C_T_b38	chr1_167551892_C_A_b38	8.18917093467738e-05	-0.384839706073227	0.957243	rs2995069	1	Tcf3	-92
chr1	19884361	19884362	ENSG00000227066.1	RP3-340N1.2	C	A	chr1_19557868_C_A_b38	chr1_19536208_C_G_b38	2.59170476887879e-05	0.505431726046846	0.928086	rs78928441	3	Spi1,IRF1,ZNF263	385,286,273
chr1	1993200	1993201	ENSG00000157933.9	SKI	C	A	chr1_2061762_C_A_b38	chr1_2062283_C_T_b38	9.21300389012519e-05	0.317478953672528	0.929787	rs13303064	1	AR	81
chr1	202026068	202026069	ENSG00000163431.12	LMOD1	G	A	chr1_202056941_G_A_b38	chr1_202056497_G_C_b38	8.94271358685298e-05	0.191025945556603	0.960076	rs11589501	3	Klf4,KLF5,SP1	-252,-249,-33
chr1	23810062	23810063	ENSG00000057757.9	PITHD1	C	G	chr1_23483570_C_G_b38	chr1_23421273_T_C_b38	6.93586504802716e-05	0.381425254550088	0.87394	rs909537	5	SP1,SP2,EGR1,CTCF,KLF5	284,209,141,63,1
chr1	32646185	32646186	ENSG00000162526.6	TSSK3	C	G	chr1_32180585_C_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.871617	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000162526.6	TSSK3	C	G	chr1_32180585_C_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.871617	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000162526.6	TSSK3	C	G	chr1_32180585_C_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.871617	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000162526.6	TSSK3	C	G	chr1_32180585_C_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.871617	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000225828.1	FAM229A	C	G	chr1_32180585_C_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.91099	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000225828.1	FAM229A	C	G	chr1_32180585_C_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.91099	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000225828.1	FAM229A	C	G	chr1_32180585_C_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.91099	rs2273164	1	Zfx	-84
chr1	32646185	32646186	ENSG00000225828.1	FAM229A	C	G	chr1_32180585_C_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.91099	rs2273164	1	Zfx	-84
chr1	32689520	32689521	ENSG00000162526.6	TSSK3	A	G	chr1_32223920_A_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.99381	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000162526.6	TSSK3	A	G	chr1_32223920_A_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.99381	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000162526.6	TSSK3	A	G	chr1_32223920_A_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.99381	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000162526.6	TSSK3	A	G	chr1_32223920_A_G_b38	chr1_32207307_T_G_b38	1.76181442939951e-05	0.304861333546182	0.99381	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000225828.1	FAM229A	A	G	chr1_32223920_A_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.820287	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000225828.1	FAM229A	A	G	chr1_32223920_A_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.820287	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000225828.1	FAM229A	A	G	chr1_32223920_A_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.820287	rs16834931	2	CTCF,Stat6	131,56
chr1	32689520	32689521	ENSG00000225828.1	FAM229A	A	G	chr1_32223920_A_G_b38	chr1_32185386_G_T_b38	3.93028278701804e-05	0.432879158052942	0.820287	rs16834931	2	CTCF,Stat6	131,56
chr1	3464892	3464893	ENSG00000227372.11	TP73-AS1	C	T	chr1_3548329_C_T_b38	chr1_3548329_C_T_b38	5.28960957283838e-08	-0.533233100063141	1	rs72853558	3	Klf4,KLF5,Klf1	314,201,50
chr1	38263833	38263834	ENSG00000214114.8	MYCBP	C	A	chr1_37798162_C_A_b38	chr1_37897131_G_A_b38	6.59494930375579e-05	0.322038238846206	0.912628	rs12134479	1	Foxd3	-90
chr1	41058153	41058154	ENSG00000049089.13	COL9A2	G	A	chr1_40592482_G_A_b38	chr1_40592482_G_A_b38	6.85016049546135e-05	0.668929014186538	1	rs6669603	2	Bcl6,HSF1	-264,-78
chr1	46309419	46309420	ENSG00000197429.10	IPP	G	C	chr1_45843748_G_C_b38	chr1_45979436_T_G_b38	6.97190580998604e-05	0.263287122423588	0.822907	rs6701614	2	IRF1,PRDM1	119,32
chr1	46640605	46640606	ENSG00000132781.17	MUTYH	T	C	chr1_46174934_T_C_b38	chr1_46149384_T_C_b38	1.61868529035382e-06	-0.28195199356418	0.903203	rs34612537	2	ZNF263,Esrrb	-223,-11
chr10	12391496	12391497	ENSG00000107537.13	PHYH	G	T	chr10_12349498_G_T_b38	chr10_12351331_T_C_b38	5.16296099569773e-05	0.210764122120016	0.820026	rs7475265	1	ZNF263	-290
chr10	135148401	135148402	ENSG00000148832.15	PAOX	C	T	chr10_133334898_C_T_b38	chr10_133331320_A_C_b38	5.93286457452886e-06	-0.723594358709592	0.823015	rs116289982	1	PLAG1	219
chr10	135148787	135148788	ENSG00000148832.15	PAOX	G	A	chr10_133335284_G_A_b38	chr10_133331320_A_C_b38	5.93286457452886e-06	-0.723594358709592	0.958115	rs116007445	1	ZNF263	49
chr10	15863432	15863433	ENSG00000148481.13	MINDY3	G	T	chr10_15821434_G_T_b38	chr10_15819943_A_T_b38	3.83891795803184e-05	0.668322870981724	0.963545	rs72781879	1	SP2	94
chr10	15863536	15863537	ENSG00000148481.13	MINDY3	G	C	chr10_15821538_G_C_b38	chr10_15819943_A_T_b38	3.83891795803184e-05	0.668322870981724	0.808551	rs72781880	1	ZNF263	-392
chr10	27967633	27967634	ENSG00000230445.4	LRRC37A6P	C	T	chr10_27678705_C_T_b38	chr10_27622109_C_A_b38	7.39767422728049e-05	0.573383887295952	0.810132	rs17682991	1	REST	124
chr10	5276639	5276640	ENSG00000165568.17	AKR1E2	C	G	chr10_5234677_C_G_b38	chr10_5225578_A_G_b38	2.26255473650282e-05	-0.622890823946253	0.814998	rs1931671	1	ZEB1	-81
chr11	110395206	110395207	ENSG00000150750.7	C11orf53	C	T	chr11_110524483_C_T_b38	chr11_110528574_C_A_b38	5.12446896569129e-05	0.598176712716456	0.986609	rs12294479	2	RXR_RAR_DR5,RUNX1	164,-28
chr11	1435142	1435143	ENSG00000167244.18	IGF2	T	C	chr11_1413913_T_C_b38	chr11_1421325_T_C_b38	1.70215590674603e-06	0.289019131359886	0.982839	rs7102832	1	SP2	211
chr11	64980006	64980007	ENSG00000213465.7	ARL2	G	A	chr11_65212536_G_A_b38	chr11_65206971_C_T_b38	8.2843311988798e-05	0.376356316398006	0.809597	rs12224555	1	ZNF263	24
chr11	65078698	65078699	ENSG00000255038.1	RP11-1167A19.2	G	A	chr11_65311228_G_A_b38	chr11_65311228_G_A_b38	9.64977591286751e-05	0.855519851974325	1	rs78922422	1	Zfx	-145
chr11	66646364	66646365	ENSG00000172508.10	CARNS1	C	T	chr11_66878894_C_T_b38	chr11_66878894_C_T_b38	9.74605015369054e-05	-0.429889777274663	1	rs55969935	1	INSM1	12
chr11	68289795	68289796	ENSG00000110721.11	CHKA	A	G	chr11_68522328_A_G_b38	chr11_68604190_A_G_b38	9.8411345675096e-06	0.320860485412599	0.853844	rs11228269	2	FLI1,Erg	-110,-84
chr11	68781069	68781070	ENSG00000261625.1	RP11-554A11.4	G	A	chr11_69013602_G_A_b38	chr11_69013602_G_A_b38	7.44551701458721e-05	0.260809155075799	1	rs11602122	3	Sox6,Sox5,SOX9	103,0,0
chr11	71974245	71974246	ENSG00000186642.15	PDE2A	A	G	chr11_72263202_A_G_b38	chr11_72255538_A_C_b38	5.23101585777327e-05	-0.228132887516934	0.815666	rs6592466	1	MZF1_5-13	42
chr12	122931567	122931568	ENSG00000256546.1	AC156455.1	G	A	chr12_122447021_G_A_b38	chr12_122362402_A_G_b38	2.73049231629348e-05	0.376287391754681	0.907358	rs10744209	6	FOSL1,JUN,JUNB,FOS,FOSL2,JUN_FOS	173,112,65,49,46,0
chr12	122931792	122931793	ENSG00000256546.1	AC156455.1	A	G	chr12_122447246_A_G_b38	chr12_122362402_A_G_b38	2.73049231629348e-05	0.376287391754681	0.907358	rs10744210	3	ZNF263,Ets1,Spi1	101,33,-30
chr12	122943979	122943980	ENSG00000256546.1	AC156455.1	T	C	chr12_122459433_T_C_b38	chr12_122362402_A_G_b38	2.73049231629348e-05	0.376287391754681	0.87339	rs7398014	1	Gfi1b	-101
chr12	124833072	124833073	ENSG00000270095.1	RP11-214K3.18	G	C	chr12_124348527_G_C_b38	chr12_124348527_G_C_b38	3.28934406631944e-05	-0.489842219840216	1	rs2272369	1	znf143	-398
chr12	132316335	132316336	ENSG00000256151.1	RP11-76C10.5	G	C	chr12_131831791_G_C_b38	chr12_131811306_T_C_b38	3.87825564594224e-05	0.403250016789545	0.843532	rs68145657	1	ZNF263	-7
chr12	52444776	52444777	ENSG00000257542.4	OR7E47P	A	G	chr12_52050993_A_G_b38	chr12_52050993_A_G_b38	2.94192403985074e-05	-0.379186157824328	1	rs2603761	1	ZNF263	51
chr12	6977274	6977275	ENSG00000111671.9	SPSB2	T	C	chr12_6868111_T_C_b38	chr12_6878068_A_C_b38	3.45900613463617e-05	-0.264208336839251	0.926048	ss1388025335	2	EGR1,MZF1_5-13	278,42
chr12	6982346	6982347	ENSG00000111671.9	SPSB2	A	C	chr12_6873183_A_C_b38	chr12_6878068_A_C_b38	3.45900613463617e-05	-0.264208336839251	0.973713	ss1388025486	1	PLAG1	1197
chr12	6993150	6993151	ENSG00000111671.9	SPSB2	G	T	chr12_6883987_G_T_b38	chr12_6878068_A_C_b38	3.45900613463617e-05	-0.264208336839251	0.980731	ss1388025780	2	SP2,E2F3	-119,-59
chr12	7023865	7023866	ENSG00000111671.9	SPSB2	T	C	chr12_6914702_T_C_b38	chr12_6878068_A_C_b38	3.45900613463617e-05	-0.264208336839251	0.807884	ss1388026730	3	SP2,SP1,KLF5	207,177,1
chr13	111566731	111566732	ENSG00000224821.5	COL4A2-AS2	C	G	chr13_110914385_C_G_b38	chr13_110911881_C_T_b38	6.91700203256223e-05	0.350378964021961	0.989927	rs570320353;rs7325244	1	NRF1	39
chr13	111567901	111567902	ENSG00000224821.5	COL4A2-AS2	C	T	chr13_110915555_C_T_b38	chr13_110911881_C_T_b38	6.91700203256223e-05	0.350378964021961	0.942424	rs7332097	1	Zfx	-398
chr13	114505317	114505318	ENSG00000267868.1	RP11-120K24.3	T	C	chr13_113802345_T_C_b38	chr13_113790144_G_T_b38	8.51465549501794e-05	-0.57199381333628	0.830115	rs35771574	1	ZNF263	-24
chr13	31655048	31655049	ENSG00000232489.1	MFAP1P1	C	G	chr13_31080912_C_G_b38	chr13_31081787_C_A_b38	4.1776006200586e-05	-0.462533558779553	0.835912	rs9596851	1	Myb	-100
chr14	73643667	73643668	ENSG00000119661.14	DNAL1	T	C	chr14_73176960_T_C_b38	chr14_73032349_A_G_b38	7.16435456513532e-05	-0.40928834724686	0.911737	rs362363	2	MYC_MAX,Arnt	11,0
chr14	74184938	74184939	ENSG00000177465.4	ACOT4	A	G	chr14_73718236_A_G_b38	chr14_73718236_A_G_b38	8.79594707323795e-05	0.336185200596715	1	rs4899476	1	E2F3	77
chr14	77422865	77422866	ENSG00000100591.7	AHSA1	G	A	chr14_76956523_G_A_b38	chr14_76956523_G_A_b38	4.74474730228036e-05	0.283688493261363	1	rs6574342	1	Tcfcp2l1	-107
chr15	85985263	85985264	ENSG00000259453.1	RP11-815J21.1	T	A	chr15_85442033_T_A_b38	chr15_85347960_A_G_b38	1.72215189423977e-05	-0.921145281749963	0.932738	rs12148727	1	EBF1	143
chr15	90945874	90945875	ENSG00000140564.11	FURIN	A	G	chr15_90402643_A_G_b38	chr15_90517889_G_T_b38	2.16330881779312e-05	-0.192483679249878	0.914121	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000140564.11	FURIN	A	G	chr15_90402643_A_G_b38	chr15_90517889_G_T_b38	2.16330881779312e-05	-0.192483679249878	0.914121	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000140564.11	FURIN	A	G	chr15_90402643_A_G_b38	chr15_90517889_G_T_b38	2.16330881779312e-05	-0.192483679249878	0.914121	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000140564.11	FURIN	A	G	chr15_90402643_A_G_b38	chr15_90517889_G_T_b38	2.16330881779312e-05	-0.192483679249878	0.914121	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000259291.2	RP11-617F23.1	A	G	chr15_90402643_A_G_b38	chr15_90399041_C_T_b38	2.04966352986882e-05	-0.265261133574036	0.93201	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000259291.2	RP11-617F23.1	A	G	chr15_90402643_A_G_b38	chr15_90399041_C_T_b38	2.04966352986882e-05	-0.265261133574036	0.93201	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000259291.2	RP11-617F23.1	A	G	chr15_90402643_A_G_b38	chr15_90399041_C_T_b38	2.04966352986882e-05	-0.265261133574036	0.93201	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr15	90945874	90945875	ENSG00000259291.2	RP11-617F23.1	A	G	chr15_90402643_A_G_b38	chr15_90399041_C_T_b38	2.04966352986882e-05	-0.265261133574036	0.93201	rs2253419	1	SMAD2_SMAD3_SMAD4	170
chr16	12071212	12071213	ENSG00000234719.8	NPIPB2	C	T	chr16_11977356_C_T_b38	chr16_11978346_G_A_b38	6.96945353270446e-05	-0.357971745221392	0.967452	rs3851005	2	ZNF263,MZF1_5-13	-128,0
chr16	17364424	17364425	ENSG00000227827.3	RP11-958N24.2	C	T	chr16_17270568_C_T_b38	chr16_17270568_C_T_b38	9.74713729999014e-05	-0.866638346928756	1	rs75026450	1	ZNF263	71
chr16	1963519	1963520	ENSG00000167972.13	ABCA3	T	C	chr16_1913519_T_C_b38	chr16_1902910_A_G_b38	3.814509236632e-05	0.276040415489997	0.889335	rs1657143	3	Klf4,Klf1,KLF5	161,83,62
chr16	1979367	1979368	ENSG00000140988.15	RPS2	C	G	chr16_1929367_C_G_b38	chr16_1929367_C_G_b38	6.82797251907678e-05	-0.220398505576594	1	rs58530366	4	ZNF263,NR2C2,MZF1_5-13,SP2	502,70,10,0
chr16	29213782	29213783	ENSG00000275807.1	RP11-1348G14.8	G	A	chr16_29202462_G_A_b38	chr16_29199192_T_C_b38	6.31723572872896e-05	-0.520090092367471	0.801182	rs153220	2	NFKB1,RXR_RAR_DR5	54,0
chr16	31439169	31439170	ENSG00000280211.1	RP11-2C24.3	G	A	chr16_31427849_G_A_b38	chr16_31427849_G_A_b38	8.73670949489497e-05	0.73562971727138	1	rs12240	1	EBF1	-6
chr16	326137	326138	ENSG00000268836.1	LA16c-OS12.2	A	G	chr16_276138_A_G_b38	chr16_276138_A_G_b38	9.38148442368097e-05	0.339951970493732	1	rs73486220	1	PLAG1	128
chr16	3451880	3451881	ENSG00000279162.1	CTD-3126B10.2	C	T	chr16_3401881_C_T_b38	chr16_3396937_G_A_b38	2.30562138008113e-05	-0.406997459130337	0.803384	rs37810	2	INSM1,MZF1_5-13	-82,-61
chr16	3571100	3571101	ENSG00000126603.8	GLIS2	T	C	chr16_3521101_T_C_b38	chr16_3521101_T_C_b38	4.64709282092892e-05	-0.429025262505507	1	rs55813818	1	KLF5	46
chr16	447347	447348	ENSG00000103269.13	RHBDL1	A	G	chr16_397348_A_G_b38	chr16_397348_A_G_b38	7.3736724000823e-05	0.292659587625038	1	rs7189866	1	SP2	2
chr16	71345531	71345532	ENSG00000157353.16	FUK	A	G	chr16_71311629_A_G_b38	chr16_71279938_G_A_b38	5.63661289401864e-07	0.374810343611608	0.924044	rs9921298	1	ZNF263	-24
chr16	89972088	89972089	ENSG00000003249.13	DBNDD1	C	T	chr16_89905681_C_T_b38	chr16_89908270_T_C_b38	8.0943696604048e-05	0.646900301577251	0.840648	rs4591146	1	INSM1	244
chr17	12990858	12990859	ENSG00000006740.16	ARHGAP44	T	C	chr17_13087542_T_C_b38	chr17_13089438_C_T_b38	8.05737788724091e-05	-0.258979973273138	0.864582	rs758107	1	AR	-364
chr17	29159403	29159404	ENSG00000266490.1	CTD-2349P21.9	G	C	chr17_30832386_G_C_b38	chr17_30916348_T_C_b38	5.69403359364559e-05	-0.50699955187952	0.867982	rs999796	4	SP2,SP1,Myod1,MZF1_5-13	-173,-135,79,42
chr17	29986841	29986842	ENSG00000176390.11	CRLF3	A	C	chr17_31659823_A_C_b38	chr17_31656015_G_A_b38	4.39786420236221e-05	-0.207945593932481	0.990515	rs12452086	1	Bcl6	5
chr17	34115336	34115337	ENSG00000132141.13	CCT6B	T	G	chr17_35788333_T_G_b38	chr17_35785659_G_T_b38	1.21075383192954e-05	-0.540267557622301	0.918169	rs75657795	1	ZBTB33	336
chr17	43205195	43205196	ENSG00000172992.11	DCAKD	C	T	chr17_45127829_C_T_b38	chr17_45127829_C_T_b38	5.60643893356241e-07	-0.391588882230349	1	rs61588218	1	EGR2	106
chr17	44221475	44221476	ENSG00000264070.1	DND1P1	A	T	chr17_46144110_A_T_b38	chr17_46458722_C_T_b38	1.05302004861235e-05	-0.505168523482737	0.860814	rs527841438	3	RORA_2,ARID3A,Prrx2	-77,0,0
chr17	44221475	44221476	ENSG00000264070.1	DND1P1	A	T	chr17_46144110_A_T_b38	chr17_46458722_C_T_b38	1.05302004861235e-05	-0.505168523482737	0.860814	rs527841438	3	RORA_2,ARID3A,Prrx2	-77,0,0
chr17	44221475	44221476	ENSG00000264070.1	DND1P1	A	T	chr17_46144110_A_T_b38	chr17_46458722_C_T_b38	1.05302004861235e-05	-0.505168523482737	0.860814	rs527841438	3	RORA_2,ARID3A,Prrx2	-77,0,0
chr17	44221475	44221476	ENSG00000264070.1	DND1P1	A	T	chr17_46144110_A_T_b38	chr17_46458722_C_T_b38	1.05302004861235e-05	-0.505168523482737	0.860814	rs527841438	3	RORA_2,ARID3A,Prrx2	-77,0,0
chr17	60752387	60752388	ENSG00000136492.8	BRIP1	C	G	chr17_62675027_C_G_b38	chr17_62670618_T_C_b38	9.02903625308925e-05	-0.484848403174312	0.8626	rs62076155	1	ZNF263	597
chr17	66589287	66589288	ENSG00000279880.1	RP11-855A2.2	A	G	chr17_68593147_A_G_b38	chr17_68599845_A_G_b38	5.25217719236019e-06	0.513174802524943	0.898792	rs11655376	1	TP63	30
chr17	74523790	74523791	ENSG00000222808.1	RNU4-47P	C	T	chr17_76527709_C_T_b38	chr17_76527709_C_T_b38	3.10135578427193e-05	-0.447149393196387	1	rs8189	1	TFAP2A	24
chr17	74683665	74683666	ENSG00000182534.13	MXRA7	G	A	chr17_76687584_G_A_b38	chr17_76687584_G_A_b38	4.35578848386363e-06	-0.275852570178868	1	rs2286590	1	Tcfcp2l1	20
chr17	74684079	74684080	ENSG00000182534.13	MXRA7	G	A	chr17_76687998_G_A_b38	chr17_76687584_G_A_b38	4.35578848386363e-06	-0.275852570178868	0.99327	rs2286589	2	SP2,ZNF263	-218,3
chr17	7490809	7490810	ENSG00000282936.1	CTC-281F24.5	G	A	chr17_7587492_G_A_b38	chr17_7623644_G_T_b38	4.3540741073224e-05	0.455391852287256	0.82412	rs10852891	3	NHLH1,Myod1,Tcf3	24,0,0
chr17	75378958	75378959	ENSG00000161544.9	CYGB	G	C	chr17_77382877_G_C_b38	chr17_77389187_C_T_b38	8.31774079768024e-05	0.298998015367664	0.803181	rs2574853	1	ZNF263	16
chr17	77910709	77910710	ENSG00000173818.16	ENDOV	T	C	chr17_79936911_T_C_b38	chr17_79936911_T_C_b38	6.74552004119882e-05	0.38831278208422	1	rs7502928	3	NRF1,EGR2,Arnt_Ahr	75,-73,0
chr17	78500887	78500888	ENSG00000157637.12	SLC38A10	G	A	chr17_80527088_G_A_b38	chr17_80536395_C_T_b38	7.46219787051564e-05	0.272558202798241	0.844268	rs9896828	1	HSF1	38
chr17	8649637	8649638	ENSG00000182224.11	CYB5D1	A	C	chr17_8746320_A_C_b38	chr17_8746320_A_C_b38	2.4614672515837e-05	0.510623757689888	1	rs78296832	2	Klf4,KLF5	91,9
chr17	8689093	8689094	ENSG00000178977.3	LINC00324	C	T	chr17_8785776_C_T_b38	chr17_8778729_T_C_b38	4.22972568457989e-05	0.280575835989385	0.879787	rs2055233	2	Myod1,SOX10	-179,0
chr19	10491474	10491475	ENSG00000130164.13	LDLR	G	T	chr19_10380799_G_T_b38	chr19_10383522_C_T_b38	9.8381683978357e-05	-0.381362330386776	0.82097	rs280502	6	SP1,SP2,ZNF263,EGR1,KLF5,Klf4	-259,-253,-162,-120,-52,35
chr19	11576259	11576260	ENSG00000234750.1	CTD-2666L21.2	A	G	chr19_11465445_A_G_b38	chr19_11467336_T_C_b38	9.58705067367582e-05	0.358285956549271	0.969252	rs493358	2	TFAP2A,TFAP2C	-88,25
chr19	14495660	14495661	ENSG00000268189.2	AC005785.2	A	C	chr19_14384849_A_C_b38	chr19_14384849_A_C_b38	6.36754820232014e-05	0.436887460109436	1	rs10421249	1	ZNF263	22
chr19	14593261	14593262	ENSG00000132003.9	ZSWIM4	T	C	chr19_14482450_T_C_b38	chr19_14484401_G_A_b38	3.1372367001568e-05	-0.448662960329506	0.98599	rs71334703	1	znf143	-158
chr19	16308199	16308200	ENSG00000141867.17	BRD4	G	A	chr19_16197389_G_A_b38	chr19_16207970_C_T_b38	9.20100241412845e-06	-0.30869555675888	0.876889	rs28372757	3	HNF4A,PPARG_RXRA,NR2C2	-55,-23,-17
chr19	16311069	16311070	ENSG00000141867.17	BRD4	G	A	chr19_16200259_G_A_b38	chr19_16207970_C_T_b38	9.20100241412845e-06	-0.30869555675888	0.992719	rs751403	1	EGR1	-58
chr19	16328387	16328388	ENSG00000141867.17	BRD4	C	T	chr19_16217577_C_T_b38	chr19_16207970_C_T_b38	9.20100241412845e-06	-0.30869555675888	0.992719	rs67306445	1	CTCF	-24
chr19	18221212	18221213	ENSG00000130479.10	MAP1S	G	A	chr19_18110403_G_A_b38	chr19_18107800_A_T_b38	1.17369620735426e-05	0.317806524770072	0.997011	rs60146811	1	ZNF263	-219
chr19	24079992	24079993	ENSG00000269837.1	IPO5P1	T	C	chr19_23897191_T_C_b38	chr19_23890629_G_A_b38	4.38144865087093e-05	-0.412821762734118	0.95189	rs2195971	3	ESR1,ESR2,NFE2L1_MafG	60,27,0
chr19	33937126	33937127	ENSG00000124299.13	PEPD	C	T	chr19_33446221_C_T_b38	chr19_33526559_T_A_b38	1.98495804587537e-05	0.329012150793519	0.898816	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124299.13	PEPD	C	T	chr19_33446221_C_T_b38	chr19_33526559_T_A_b38	1.98495804587537e-05	0.329012150793519	0.898816	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124299.13	PEPD	C	T	chr19_33446221_C_T_b38	chr19_33526559_T_A_b38	1.98495804587537e-05	0.329012150793519	0.898816	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124299.13	PEPD	C	T	chr19_33446221_C_T_b38	chr19_33526559_T_A_b38	1.98495804587537e-05	0.329012150793519	0.898816	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124302.12	CHST8	C	T	chr19_33446221_C_T_b38	chr19_33436565_G_T_b38	1.48460387438514e-05	0.527204554790157	0.856412	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124302.12	CHST8	C	T	chr19_33446221_C_T_b38	chr19_33436565_G_T_b38	1.48460387438514e-05	0.527204554790157	0.856412	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124302.12	CHST8	C	T	chr19_33446221_C_T_b38	chr19_33436565_G_T_b38	1.48460387438514e-05	0.527204554790157	0.856412	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	33937126	33937127	ENSG00000124302.12	CHST8	C	T	chr19_33446221_C_T_b38	chr19_33436565_G_T_b38	1.48460387438514e-05	0.527204554790157	0.856412	rs62100664	2	SMAD2_SMAD3_SMAD4,Myog	236,48
chr19	3545627	3545628	ENSG00000077009.13	NMRK2	G	A	chr19_3545630_G_A_b38	chr19_3545884_G_A_b38	5.22643353146873e-05	-0.491913104607375	0.818964	rs17674491	2	EGR1,EGR2	-148,-131
chr19	46725498	46725499	ENSG00000011478.11	QPCTL	G	C	chr19_46222242_G_C_b38	chr19_46196358_C_T_b38	3.01127476710107e-07	0.410092050698989	0.804197	rs2240924	2	INSM1,Gfi1b	-180,38
chr19	46725500	46725501	ENSG00000011478.11	QPCTL	C	G	chr19_46222244_C_G_b38	chr19_46196358_C_T_b38	3.01127476710107e-07	0.410092050698989	0.801615	rs2240925	1	INSM1	-180
chr19	49299532	49299533	ENSG00000161618.9	ALDH16A1	A	G	chr19_48796276_A_G_b38	chr19_48797348_T_C_b38	6.81699877127532e-05	-0.318638001003261	0.836714	rs557106	1	REL	53
chr19	55582570	55582571	ENSG00000267265.5	CTC-550B14.7	G	A	chr19_55071203_G_A_b38	chr19_55076454_G_A_b38	3.26718116494169e-06	0.620304618944932	0.8828	rs78447291	1	Zfx	-196
chr19	55587821	55587822	ENSG00000267265.5	CTC-550B14.7	G	A	chr19_55076454_G_A_b38	chr19_55076454_G_A_b38	3.26718116494169e-06	0.620304618944932	1	rs12609976	1	REST	-91
chr19	604629	604630	ENSG00000129946.10	SHC2	G	A	chr19_604630_G_A_b38	chr19_604630_G_A_b38	6.5608516628943e-05	0.442941569816388	1	rs11666354	1	Klf4	-153
chr19	9546350	9546351	ENSG00000130810.19	PPAN	G	T	chr19_9435675_G_T_b38	chr19_9437746_C_A_b38	2.59209260159042e-07	-0.190367980907243	0.903111	rs6512130	1	Foxo1	122
chr2	113594386	113594387	ENSG00000234997.1	AC016745.3	G	A	chr2_112836810_G_A_b38	chr2_112843818_T_C_b38	1.2026681882935e-05	0.421182689033817	0.952552	rs1143627	2	CDX2,TBP	-159,74
chr2	201078087	201078088	ENSG00000225695.1	HNRNPA1P35	T	C	chr2_200213365_T_C_b38	chr2_200211678_A_G_b38	1.06651826819706e-05	0.465372728515873	0.936615	rs10445790	3	Spi1,ZNF263,SPIB	-175,133,0
chr2	202645350	202645351	ENSG00000003400.14	CASP10	C	A	chr2_201780628_C_A_b38	chr2_201739357_C_T_b38	8.30914872130142e-05	0.250549528854606	0.945417	rs3820966	1	ZNF263	113
chr2	220634226	220634227	ENSG00000054356.13	PTPRN	C	A	chr2_219769505_C_A_b38	chr2_219764722_A_C_b38	3.61730652799541e-05	0.648951990467636	0.809164	rs4674433	1	Zfx	-35
chr2	25153985	25153986	ENSG00000223754.1	AC008073.9	T	C	chr2_24931117_T_C_b38	chr2_24929931_A_G_b38	3.1231174107753e-05	0.475343610957767	0.96392	rs6726261	1	ZNF263	-24
chr20	48251754	48251755	ENSG00000124214.19	STAU1	T	A	chr20_49635218_T_A_b38	chr20_49663456_A_G_b38	3.65522092135929e-05	0.243793304131303	0.934619	rs3746557	2	EGR1,EGR2	-107,-34
chr20	5785513	5785514	ENSG00000205181.5	LINC00654	C	G	chr20_5804868_C_G_b38	chr20_5804868_C_G_b38	6.31866192293897e-05	0.729593516058335	1	rs113435655	3	FOXP1,FOXF2,FOXP2	-169,31,-18
chr20	59680883	59680884	ENSG00000225106.1	RP11-429E11.2	C	A	chr20_61105828_C_A_b38	chr20_61105828_C_A_b38	1.13500144854839e-05	0.457778173504124	1	rs735263	1	ZNF263	214
chr20	62547031	62547032	ENSG00000101194.17	SLC17A9	T	C	chr20_63915679_T_C_b38	chr20_63909120_C_T_b38	9.61187148106941e-05	0.24323712103715	0.86407	rs2427546	1	ESR1	62
chr21	27231620	27231621	ENSG00000154719.13	MRPL39	T	G	chr21_25859310_T_G_b38	chr21_25826666_A_T_b38	1.44365315893269e-06	0.475924391853835	0.857752	rs73170786	1	Stat4	-39
chr21	40211107	40211108	ENSG00000226012.1	AP001434.2	C	T	chr21_38839184_C_T_b38	chr21_38830415_G_A_b38	1.2624843499073e-05	-0.346470556806237	0.877413	rs2836705	1	Zfx	-139
chr21	41954716	41954717	ENSG00000183036.10	PCP4	A	G	chr21_40582790_A_G_b38	chr21_40603545_T_C_b38	2.27425527050917e-05	-0.847869633320886	0.867525	rs74811265	3	PPARG,ESR2,ESR1	614,198,12
chr22	21356537	21356538	ENSG00000183773.15	AIFM3	A	T	chr22_21002249_A_T_b38	chr22_21011821_T_C_b38	9.97566503481566e-05	0.33260389556779	0.930057	rs368989	1	NRF1	187
chr22	36593160	36593161	ENSG00000100379.17	KCTD17	T	C	chr22_36197115_T_C_b38	chr22_36197115_T_C_b38	7.04700896433667e-05	-0.174747690288093	1	rs132707	2	RUNX1,RUNX2	128,105
chr22	42475567	42475568	ENSG00000270083.1	RP1-257I20.14	A	G	chr22_42079564_A_G_b38	chr22_42037797_C_T_b38	9.14830618120127e-05	0.495130195088087	0.809942	rs8135801	1	NRF1	28
chr3	127988074	127988075	ENSG00000073111.13	MCM2	T	C	chr3_128269232_T_C_b38	chr3_128358715_G_A_b38	4.2768915344232e-05	-0.196059939779412	0.919068	rs62273567	1	MAX	-38
chr3	183602316	183602317	ENSG00000273261.1	RP11-531F16.4	G	A	chr3_183884529_G_A_b38	chr3_183871539_G_T_b38	2.88208671553339e-06	-0.690926864995821	0.839172	rs78177170	1	ZBTB33	52
chr3	183602824	183602825	ENSG00000273261.1	RP11-531F16.4	A	G	chr3_183885037_A_G_b38	chr3_183871539_G_T_b38	2.88208671553339e-06	-0.690926864995821	0.833037	rs3792589	2	EGR1,SP1	-100,-28
chr3	184190963	184190964	ENSG00000175166.16	PSMD2	G	A	chr3_184473176_G_A_b38	chr3_184483966_G_A_b38	1.26914135267311e-06	0.34052545232386	0.875793	rs62285969	3	SREBF2,NFE2L1_MafG,SREBF1	-35,0,0
chr3	186888146	186888147	ENSG00000058866.14	DGKG	G	A	chr3_187170359_G_A_b38	chr3_187167972_C_T_b38	3.91967518689761e-05	-0.483471049220589	0.914978	rs77209823	2	Foxd3,TP63	-103,-17
chr3	186888234	186888235	ENSG00000058866.14	DGKG	T	C	chr3_187170447_T_C_b38	chr3_187167972_C_T_b38	3.91967518689761e-05	-0.483471049220589	0.987758	rs113531934	2	SP2,SP1	37,9
chr3	196350909	196350910	ENSG00000228109.1	MELTF-AS1	G	A	chr3_196624039_G_A_b38	chr3_196624039_G_A_b38	9.90817335113496e-05	0.322452525733935	1	rs1825471	1	MEF2C	37
chr3	45059610	45059611	ENSG00000173578.7	XCR1	A	G	chr3_45018119_A_G_b38	chr3_45028205_C_T_b38	8.33457470092291e-05	0.359718348623001	0.883675	rs2372862	4	Klf4,SREBF1,SREBF2,Klf1	169,160,100,26
chr3	45077457	45077458	ENSG00000173578.7	XCR1	G	A	chr3_45035966_G_A_b38	chr3_45028205_C_T_b38	8.33457470092291e-05	0.359718348623001	0.949443	rs8318	2	E2F3,NR2C2	-231,-30
chr3	49492480	49492481	ENSG00000164078.12	MST1R	C	G	chr3_49455048_C_G_b38	chr3_49367731_A_G_b38	1.62547620300362e-05	-0.390325564527056	0.97256	rs9841110	2	INSM1,THAP1	-112,71
chr3	72386085	72386086	ENSG00000163605.14	PPP4R2	G	T	chr3_72336935_G_T_b38	chr3_72336935_G_T_b38	5.542096363267e-05	-0.262084968891067	1	rs34690317	3	TFAP2A,INSM1,TFAP2C	93,86,16
chr4	139792743	139792744	ENSG00000085871.8	MGST2	A	G	chr4_138871590_A_G_b38	chr4_138870117_C_T_b38	1.52787669726957e-06	-0.315769538564243	0.98365	rs7697814	2	EGR2,Arnt_Ahr	260,0
chr4	142297257	142297258	ENSG00000164136.16	IL15	G	A	chr4_141376104_G_A_b38	chr4_141381932_T_G_b38	3.81625585196332e-05	0.388984588372016	0.849355	rs13110603	2	ZNF263,PPARG_RXRA	-158,35
chr4	183825701	183825702	ENSG00000272784.1	RP11-335L23.5	C	A	chr4_182904549_C_A_b38	chr4_182905569_T_C_b38	5.37602995012532e-05	-0.439244159684551	0.964095	rs13116494	1	ESR1	-59
chr4	185655486	185655487	ENSG00000151725.11	CENPU	G	T	chr4_184734333_G_T_b38	chr4_184734333_G_T_b38	4.7904133257171e-07	-0.370989873400705	1	rs876838	1	ELK1	66
chr4	186771092	186771093	ENSG00000164342.12	TLR3	G	C	chr4_185849939_G_C_b38	chr4_185861306_C_T_b38	9.27721160628621e-05	0.425864724104703	0.924974	rs3796645	1	PPARG_RXRA	-18
chr4	865940	865941	ENSG00000215375.6	MYL5	A	G	chr4_872153_A_G_b38	chr4_882530_C_T_b38	1.06002361601581e-06	0.405477516515902	0.937196	rs73207791	2	Bhlhe40,Arnt	63,0
chr5	139147553	139147554	ENSG00000254363.6	CTB-131B5.5	A	G	chr5_139767969_A_G_b38	chr5_139766162_A_G_b38	3.21678881930573e-06	-0.364942183649262	0.82441	rs356477	1	NHLH1	26
chr5	141391786	141391787	ENSG00000255622.3	PCDHB17P	C	A	chr5_142012222_C_A_b38	chr5_142012222_C_A_b38	3.4016654100974e-05	0.82856347658637	1	rs77170450	3	RUNX2,EGR2,RUNX1	290,-205,36
chr5	146775718	146775719	ENSG00000164266.10	SPINK1	G	A	chr5_147396156_G_A_b38	chr5_147395912_T_G_b38	9.1444363206104e-05	0.471567265319741	1	rs2288804	2	ESRRA,NR4A2	129,0
chr5	146783655	146783656	ENSG00000164266.10	SPINK1	C	G	chr5_147404093_C_G_b38	chr5_147395912_T_G_b38	9.1444363206104e-05	0.471567265319741	0.837433	rs3805536	1	THAP1	30
chr5	148600692	148600693	ENSG00000113712.17	CSNK1A1	G	A	chr5_149221130_G_A_b38	chr5_149221130_G_A_b38	4.32892705131832e-06	0.415775137029128	1	rs11749868	1	ZNF263	-109
chr5	154366182	154366183	ENSG00000155508.13	CNOT8	G	A	chr5_154986623_G_A_b38	chr5_154842997_C_G_b38	7.3421334312464e-08	-0.338083267563051	0.888191	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000155508.13	CNOT8	G	A	chr5_154986623_G_A_b38	chr5_154842997_C_G_b38	7.3421334312464e-08	-0.338083267563051	0.888191	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000155508.13	CNOT8	G	A	chr5_154986623_G_A_b38	chr5_154842997_C_G_b38	7.3421334312464e-08	-0.338083267563051	0.888191	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000155508.13	CNOT8	G	A	chr5_154986623_G_A_b38	chr5_154842997_C_G_b38	7.3421334312464e-08	-0.338083267563051	0.888191	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000170271.10	FAXDC2	G	A	chr5_154986623_G_A_b38	chr5_154737635_A_G_b38	4.99112395114095e-05	-0.240298448360017	0.872093	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000170271.10	FAXDC2	G	A	chr5_154986623_G_A_b38	chr5_154737635_A_G_b38	4.99112395114095e-05	-0.240298448360017	0.872093	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000170271.10	FAXDC2	G	A	chr5_154986623_G_A_b38	chr5_154737635_A_G_b38	4.99112395114095e-05	-0.240298448360017	0.872093	rs286623	1	znf143	42
chr5	154366182	154366183	ENSG00000170271.10	FAXDC2	G	A	chr5_154986623_G_A_b38	chr5_154737635_A_G_b38	4.99112395114095e-05	-0.240298448360017	0.872093	rs286623	1	znf143	42
chr5	1649186	1649187	ENSG00000112877.7	CEP72	C	G	chr5_1649072_C_G_b38	chr5_1659723_A_G_b38	3.42072206954752e-06	0.601765979713882	0.886415	rs56871414	2	ZNF263,MZF1_1-4	524,0
chr5	71282078	71282079	ENSG00000131711.14	MAP1B	G	A	chr5_71986252_G_A_b38	chr5_71984359_G_A_b38	4.61947193140342e-05	-0.253422222523028	0.991075	rs6876163	1	PPARG_RXRA	5
chr5	78298456	78298457	ENSG00000164329.13	PAPD4	A	C	chr5_79002634_A_C_b38	chr5_78995343_T_C_b38	1.72228294134525e-05	-0.278812093078892	0.906687	rs77739995	1	EGR2	-53
chr5	78744394	78744395	ENSG00000164309.14	CMYA5	C	T	chr5_79448572_C_T_b38	chr5_79467051_A_G_b38	6.47087931251155e-05	-0.499539650893611	0.809709	rs12514775	1	PRDM1	-76
