Downloading Alkes Group data

wget -r -np -R "index.html*" https://data.broadinstitute.org/alkesgroup/UKBB/UKBB_409K/

- removed:
body_BMIz.sumstats.gz
body_HEIGHTz.sumstats.gz
cov_EDU_COLLEGE.sumstats.gz
cov_EDU_YEARS.sumstats.gz
mental_NEUROTICISM.sumstats.gz
disease_T2D.sumstats.gz

- Sumstats contain A1, A2, Beta, N, INFO, and allele freq. Should be able to munge this pretty easily.


- Munged in this way
python ~/my-python-modules/ldsc/munge_sumstats.py \
--sumstats $i \
--out munged_${i%.sumstats.gz}

- These following sumstats could not be munged due to DType of P column. I will just move on since none of these are really that interesting
munged_blood_MEAN_CORPUSCULAR_HEMOGLOBIN.log
munged_blood_MEAN_PLATELET_VOL.log
munged_blood_PLATELET_COUNT.log
munged_blood_PLATELET_DISTRIB_WIDTH.log
munged_blood_RED_COUNT.log
munged_bmd_HEEL_TSCOREz.log
munged_pigment_HAIR.log
munged_pigment_TANNING.log
