# Supplemental Table S10. All results of SNPs that achieve a PIP >= 0.1 in multiple schizophrenia loci.
# This includes:
# The SNP ID (id)
# The chromosome (chr)
# The position (pos)
# The reference SNP ID (rsid)
# The A1 allele (A1)
# The A2 allele (A2)
# The Z-score for schizophrenia (Zscore)
# The lead SNP (lead.snp)
# The r2 between the proxy SNP and the lead SNP (r.squared)
# The -log10(P-value) for the SNP in the schizophrenia GWAS (-log10(P-value)
# The PIP when annotation was not included (PIP_null)
# The PIP when the annotation was included (PIP_anno)

id	chr	pos	rsid	A1	A2	Zscore	lead.snp	r.squared	`-log10(P)`	PIP_null	PIP_anno
rs10803143:243615589:C:T	chr1	243615589	rs10803143	T	C	-4.903848164	rs10803138	0.193427	6.034328029	0.0692704	0.109437
rs10803143:243615589:C:T	chr1	243615589	rs10803143	T	C	-4.903848164	rs14403	0.225084	6.034328029	0.131878	0.293043
rs11682175:57987593:T:C	chr2	57987593	rs11682175	C	T	6.976087573	rs75575209	0.104966	11.51570016	0.999266	0.999023
rs11682175:57987593:T:C	chr2	57987593	rs11682175	C	T	6.976087573	rs7596038	0.325625	11.51570016	0.891903	0.864265
rs1191551:30000405:T:G	chr14	30000405	rs1191551	G	T	-6.251921199	rs1191551	1	9.385102784	0.158509	0.156438
rs1191551:30000405:T:G	chr14	30000405	rs1191551	G	T	-6.251921199	rs199687649	0.105874	9.385102784	0.269079	0.263236
rs13262595:143316970:A:G	chr8	143316970	rs13262595	G	A	-8.491858619	rs58033671	1	16.70114692	0.159678	0.161385
rs13262595:143316970:A:G	chr8	143316970	rs13262595	G	A	-8.491858619	rs67439964	0.116144	16.70114692	0.285961	0.285324
rs1367858:201160771:C:T	chr2	201160771	rs1367858	T	C	6.967187076	rs1347692	0.103711	11.48945499	0.557321	0.404243
rs1367858:201160771:C:T	chr2	201160771	rs1367858	T	C	6.967187076	rs2949006	0.274347	11.48945499	0.389903	0.279644
rs136844:40049149:A:G	chr22	40049149	rs136844	G	A	6.338736854	rs4820386	0.100942	9.634512015	0.484452	0.711584
rs136844:40049149:A:G	chr22	40049149	rs136844	G	A	6.338736854	rs5757730	0.178698	9.634512015	0.192209	0.371983
rs1593304:131619847:A:G	chr7	131619847	rs1593304	G	A	5.592354941	rs4523180	0.4123	7.649751982	0.48108	0.491921
rs1593304:131619847:A:G	chr7	131619847	rs1593304	G	A	5.592354941	rs7801375	0.131776	7.649751982	0.916967	0.915562
rs16867576:88746331:A:G	chr5	88746331	rs16867576	G	A	-6.736537347	rs16867576	1	10.78251606	0.131004	0.135618
rs16867576:88746331:A:G	chr5	88746331	rs16867576	G	A	-6.736537347	rs254782	0.105622	10.78251606	0.209108	0.254137
rs1959440:30208630:G:T	chr14	30208630	rs1959440	T	G	6.230653206	rs1191551	0.115917	9.332547047	0.226566	0.209962
rs1959440:30208630:G:T	chr14	30208630	rs1959440	T	G	6.230653206	rs199687649	0.212229	9.332547047	0.228456	0.215964
rs199687649:30189985:C:CA	chr14	30189985	rs199687649	CA	C	5.768309789	rs1191551	0.105874	8.135904427	0.2043	0.191265
rs199687649:30189985:C:CA	chr14	30189985	rs199687649	CA	C	5.768309789	rs199687649	1	8.135904427	0.125494	0.123489
rs34603418:53252889:C:T	chr18	53252889	rs34603418	T	C	-6.468406803	rs28758902	0.151661	9.995678626	0.0526548	0.103674
rs34603418:53252889:C:T	chr18	53252889	rs34603418	T	C	-6.468406803	rs66791238	0.706361	9.995678626	0.056419	0.11005
rs3769482:201173100:C:G	chr2	201173100	rs3769482	G	C	6.745864568	rs1347692	0.109065	10.81815641	0.083403	0.183814
rs3769482:201173100:C:G	chr2	201173100	rs3769482	G	C	6.745864568	rs2949006	0.271498	10.81815641	0.104161	0.188649
rs3769483:201173048:A:G	chr2	201173048	rs3769483	G	A	6.760076422	rs1347692	0.109065	10.86012091	0.0983438	0.204193
rs3769483:201173048:A:G	chr2	201173048	rs3769483	G	A	6.760076422	rs2949006	0.271498	10.86012091	0.11256	0.19556
rs3769484:201172999:C:T	chr2	201172999	rs3769484	T	C	6.72348017	rs1347692	0.109065	10.75202673	0.080452	0.171924
rs3769484:201172999:C:T	chr2	201172999	rs3769484	T	C	6.72348017	rs2949006	0.271498	10.75202673	0.0947778	0.181371
rs3773739:53268429:A:G	chr3	53268429	rs3773739	G	A	5.353814816	rs1080500	0.146511	7.063486258	0.0867542	0.155697
rs3773739:53268429:A:G	chr3	53268429	rs3773739	G	A	5.353814816	rs312477	0.267049	7.063486258	0.0522684	0.111543
rs3773745:53270424:A:G	chr3	53270424	rs3773745	G	A	5.336709619	rs1080500	0.150663	7.023650021	0.0829622	0.134321
rs3773745:53270424:A:G	chr3	53270424	rs3773745	G	A	5.336709619	rs312477	0.264122	7.023650021	0.0494948	0.102448
rs4129585:143312933:A:C	chr8	143312933	rs4129585	C	A	-8.578702993	rs58033671	0.995983	17.03338901	0.255191	0.252963
rs4129585:143312933:A:C	chr8	143312933	rs4129585	C	A	-8.578702993	rs67439964	0.11363	17.03338901	0.447596	0.442435
rs4309187:113412443:A:C	chr11	113412443	rs4309187	C	A	6.652052879	rs2514218	0.780959	10.537602	0.100936	0.103178
rs4309187:113412443:A:C	chr11	113412443	rs4309187	C	A	6.652052879	rs4936277	0.160988	10.537602	0.697681	0.701605
rs4976992:143369368:C:T	chr8	143369368	rs4976992	T	C	-7.258379252	rs58033671	0.360608	12.39685563	0.184291	0.180902
rs4976992:143369368:C:T	chr8	143369368	rs4976992	T	C	-7.258379252	rs67439964	0.105037	12.39685563	0.0963828	0.104535
rs4976999:143269443:A:G	chr8	143269443	rs4976999	G	A	5.295369707	rs4976967	0.367974	6.924453039	0.163885	0.157975
rs4976999:143269443:A:G	chr8	143269443	rs4976999	G	A	5.295369707	rs58033671	0.110073	6.924453039	0.138418	0.137203
rs5825145:53352557:GTTTA:G	chr18	53352557	rs5825145	G	GTTTA	2.344255765	rs28758902	0.233811	1.718739313	0.37084	0.319299
rs5825145:53352557:GTTTA:G	chr18	53352557	rs5825145	G	GTTTA	2.344255765	rs66791238	0.207208	1.718739313	0.539911	0.453631
rs5837713:200768454:TC:T	chr2	200768454	rs5837713	T	TC	-7.181042286	rs200626410	1	12.17127567	0.999999	0.999999
rs5837713:200768454:TC:T	chr2	200768454	rs5837713	T	TC	-7.181042286	rs2949006	0.284073	12.17127567	0.871392	0.874417
rs587136:53225049:T:C	chr18	53225049	rs587136	C	T	-6.651571536	rs144158419	0.114465	10.54668166	0.101485	0.179463
rs587136:53225049:T:C	chr18	53225049	rs587136	C	T	-6.651571536	rs28758902	0.156987	10.54668166	0.109627	0.192645
rs587136:53225049:T:C	chr18	53225049	rs587136	C	T	-6.651571536	rs66791238	0.70448	10.54668166	0.09571	0.182052
rs6435048:201167854:C:T	chr2	201167854	rs6435048	T	C	6.779297349	rs1347692	0.109065	10.91721463	0.117689	0.092118
rs6435048:201167854:C:T	chr2	201167854	rs6435048	T	C	6.779297349	rs2949006	0.271498	10.91721463	0.125616	0.0928108
rs66580221:88745184:T:C	chr5	88745184	rs66580221	C	T	-6.718451794	rs16867576	0.989885	10.73048706	0.119736	0.122489
rs66580221:88745184:T:C	chr5	88745184	rs66580221	C	T	-6.718451794	rs254782	0.106864	10.73048706	0.269501	0.241866
rs6704641:200164252:G:A	chr2	200164252	rs6704641	A	G	6.539869653	rs1451488	0.191582	10.21041929	0.116715	0.105589
rs6704641:200164252:G:A	chr2	200164252	rs6704641	A	G	6.539869653	rs34719143	0.322981	10.21041929	0.189402	0.173214
rs68034392:53271457:GT:G	chr18	53271457	rs68034392	G	GT	-6.600038041	rs28758902	0.161169	10.37448177	0.121599	0.0958916
rs68034392:53271457:GT:G	chr18	53271457	rs68034392	G	GT	-6.600038041	rs66791238	0.662778	10.37448177	0.119449	0.0885532
rs6891794:88746164:T:G	chr5	88746164	rs6891794	G	T	-6.730509374	rs16867576	0.989885	10.77469072	0.125742	0.127366
rs6891794:88746164:T:G	chr5	88746164	rs6891794	G	T	-6.730509374	rs254782	0.106864	10.77469072	0.271098	0.22968
rs72930759:53153294:T:C	chr18	53153294	rs72930759	C	T	-6.440131472	rs144158419	0.319429	9.920818754	0.0653776	0.1161
rs72930759:53153294:T:C	chr18	53153294	rs72930759	C	T	-6.440131472	rs66791238	0.153474	9.920818754	0.0587884	0.109293
rs72930767:53158629:G:C	chr18	53158629	rs72930767	C	G	-6.4403001	rs144158419	0.319429	9.928117993	0.0630692	0.123487
rs72930767:53158629:G:C	chr18	53158629	rs72930767	C	G	-6.4403001	rs66791238	0.153474	9.928117993	0.0596414	0.105833
rs72930769:53158650:A:G	chr18	53158650	rs72930769	G	A	-6.444075904	rs144158419	0.319429	9.931814138	0.0636988	0.118085
rs72930769:53158650:A:G	chr18	53158650	rs72930769	G	A	-6.444075904	rs66791238	0.153474	9.931814138	0.0586742	0.107063
rs72930787:53163569:C:T	chr18	53163569	rs72930787	T	C	-6.464537344	rs144158419	0.319429	9.991399828	0.0740518	0.138594
rs72930787:53163569:C:T	chr18	53163569	rs72930787	T	C	-6.464537344	rs66791238	0.153474	9.991399828	0.0614812	0.113615
rs74576444:143368449:T:C	chr8	143368449	rs74576444	C	T	-7.258379252	rs58033671	0.358217	12.40120949	0.186245	0.193106
rs74576444:143368449:T:C	chr8	143368449	rs74576444	C	T	-7.258379252	rs67439964	0.104411	12.40120949	0.104475	0.102779
rs7605111:200162727:C:T	chr2	200162727	rs7605111	T	C	6.527267644	rs1451488	0.200936	10.17327748	0.10954	0.102442
rs7605111:200162727:C:T	chr2	200162727	rs7605111	T	C	6.527267644	rs34719143	0.309731	10.17327748	0.15593	0.150778
rs7814166:143370923:A:T	chr8	143370923	rs7814166	T	A	-7.28681508	rs58033671	0.360608	12.48412616	0.196129	0.208551
rs7814166:143370923:A:T	chr8	143370923	rs7814166	T	A	-7.28681508	rs67439964	0.105037	12.48412616	0.1118	0.114087
rs79480505:143287747:C:T	chr8	143287747	rs79480505	T	C	-4.907846341	rs4976967	0.179363	6.036212173	0.0935862	0.188299
rs79480505:143287747:C:T	chr8	143287747	rs79480505	T	C	-4.907846341	rs67439964	0.148866	6.036212173	0.113419	0.247392
rs8090341:53292908:T:C	chr18	53292908	rs8090341	C	T	-0.409361594	rs28758902	0.163538	0.167235695	0.187644	0.156149
rs8090341:53292908:T:C	chr18	53292908	rs8090341	C	T	-0.409361594	rs66791238	0.239528	0.167235695	0.233818	0.214442
rs8180995:143326237:A:G	chr8	143326237	rs8180995	G	A	-8.446262118	rs4976967	0.181589	16.51286162	0.166817	0.15727
rs8180995:143326237:A:G	chr8	143326237	rs8180995	G	A	-8.446262118	rs58033671	0.680671	16.51286162	0.117077	0.120392
rs9947720:53114263:T:C	chr18	53114263	rs9947720	C	T	0.293552277	rs144158419	0.137142	0.11407366	0.989065	0.990117
rs9947720:53114263:T:C	chr18	53114263	rs9947720	C	T	0.293552277	rs79926379	0.237086	0.11407366	0.918961	0.915592