#include <adapt_dense_e_nuts.hpp>

Inheritance diagram for stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >:

Public Member Functions
	adapt_dense_e_nuts (M &m, BaseRNG &rng, std::ostream o=&std::cout, std::ostream e=0)

	~adapt_dense_e_nuts ()

sample	transition (sample &init_sample)

void	disengage_adaptation ()

Public Member Functions inherited from stan::mcmc::dense_e_nuts< M, BaseRNG >
	dense_e_nuts (M &m, BaseRNG &rng, std::ostream o=&std::cout, std::ostream e=0)

bool	compute_criterion (ps_point &start, dense_e_point &finish, Eigen::VectorXd &rho)

Public Member Functions inherited from stan::mcmc::base_nuts< M, dense_e_point, dense_e_metric, expl_leapfrog, BaseRNG >
	base_nuts (M &m, BaseRNG &rng, std::ostream o, std::ostream e)

	~base_nuts ()

void	set_max_depth (const int d)

void	set_max_delta (const double d)

int	get_max_depth ()

double	get_max_delta ()

sample	transition (sample &init_sample)

void	write_sampler_param_names (std::ostream &o)

void	write_sampler_params (std::ostream &o)

void	get_sampler_param_names (std::vector< std::string > &names)

void	get_sampler_params (std::vector< double > &values)

int	build_tree (int depth, Eigen::VectorXd &rho, ps_point *z_init_parent, ps_point &z_propose, nuts_util &util)

Public Member Functions inherited from stan::mcmc::base_hmc< M, dense_e_point, dense_e_metric, expl_leapfrog, BaseRNG >
	base_hmc (M &m, BaseRNG &rng, std::ostream o, std::ostream e)

void	write_sampler_state (std::ostream *o)

void	get_sampler_diagnostic_names (std::vector< std::string > &model_names, std::vector< std::string > &names)

void	get_sampler_diagnostics (std::vector< double > &values)

void	seed (const Eigen::VectorXd &q)

void	init_stepsize ()

dense_e_point &	z ()

virtual void	set_nominal_stepsize (const double e)

double	get_nominal_stepsize ()

double	get_current_stepsize ()

virtual void	set_stepsize_jitter (const double j)

double	get_stepsize_jitter ()

void	sample_stepsize ()

Public Member Functions inherited from stan::mcmc::base_mcmc
	base_mcmc (std::ostream o, std::ostream e)

virtual	~base_mcmc ()

std::string	name ()

Public Member Functions inherited from stan::mcmc::stepsize_covar_adapter
	stepsize_covar_adapter (int n)

stepsize_adaptation &	get_stepsize_adaptation ()

covar_adaptation &	get_covar_adaptation ()

void	set_window_params (unsigned int num_warmup, unsigned int init_buffer, unsigned int term_buffer, unsigned int base_window, std::ostream *e=0)

Public Member Functions inherited from stan::mcmc::base_adapter
	base_adapter ()

virtual void	engage_adaptation ()

bool	adapting ()

Additional Inherited Members
Public Attributes inherited from stan::mcmc::base_nuts< M, dense_e_point, dense_e_metric, expl_leapfrog, BaseRNG >
int	depth_

int	max_depth_

double	max_delta_

int	n_leapfrog_

int	n_divergent_

Protected Attributes inherited from stan::mcmc::base_hmc< M, dense_e_point, dense_e_metric, expl_leapfrog, BaseRNG >
dense_e_point	z_

expl_leapfrog< dense_e_metric < M, BaseRNG >, dense_e_point >	integrator_

dense_e_metric< M, BaseRNG >	hamiltonian_

BaseRNG &	rand_int_

boost::uniform_01< BaseRNG & >	rand_uniform_

double	nom_epsilon_

double	epsilon_

double	epsilon_jitter_

Protected Attributes inherited from stan::mcmc::base_mcmc
std::string	name_

std::ostream *	out_stream_

std::ostream *	err_stream_

Protected Attributes inherited from stan::mcmc::stepsize_covar_adapter
stepsize_adaptation	stepsize_adaptation_

covar_adaptation	covar_adaptation_

Protected Attributes inherited from stan::mcmc::base_adapter
bool	adapt_flag_

Detailed Description

template<typename M, class BaseRNG>
class stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >

Definition at line 16 of file adapt_dense_e_nuts.hpp.

Constructor & Destructor Documentation

template<typename M , class BaseRNG >

stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >::adapt_dense_e_nuts	(	M &	m,
		BaseRNG &	rng,
		std::ostream *	o = `&std::cout`,
		std::ostream *	e = `0`
	)

inline

Definition at line 21 of file adapt_dense_e_nuts.hpp.

template<typename M , class BaseRNG >

stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >::~adapt_dense_e_nuts ( )

inline

Definition at line 27 of file adapt_dense_e_nuts.hpp.

Member Function Documentation

template<typename M , class BaseRNG >

void stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >::disengage_adaptation ( )

inlinevirtual

Reimplemented from stan::mcmc::base_adapter.

Definition at line 52 of file adapt_dense_e_nuts.hpp.

template<typename M , class BaseRNG >

sample stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >::transition ( sample & init_sample )

inlinevirtual

Implements stan::mcmc::base_mcmc.

Definition at line 29 of file adapt_dense_e_nuts.hpp.

The documentation for this class was generated from the following file:

src/stan/mcmc/hmc/nuts/adapt_dense_e_nuts.hpp

Public Member Functions

Additional Inherited Members

Detailed Description

template<typename M, class BaseRNG> class stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >

Constructor & Destructor Documentation

Member Function Documentation

template<typename M, class BaseRNG>
class stan::mcmc::adapt_dense_e_nuts< M, BaseRNG >