# Generated by roxygen2: do not edit by hand

export(HoneyBADGER)
export(calcAlleleCnvBoundaries)
export(calcAlleleCnvProb)
export(calcCombCnvProb)
export(calcGexpCnvBoundaries)
export(calcGexpCnvProb)
export(getAlleleCount)
export(getCellAlleleCount)
export(getCoverage)
export(getHetRate)
export(getSnpMats)
export(getSnpMats10X)
export(isHet)
export(isHetAlt)
export(plotAlleleProfile)
export(plotGexpProfile)
export(setAlleleMats)
export(setGeneFactors)
export(setGexpDev)
export(setGexpMats)
export(setMvFit)
export(summarizeMatrix)
export(trimSnps)
exportClasses(HoneyBADGER)
import(ggplot2)
import(grDevices)
import(graphics)
import(gridExtra)
import(reshape2)
import(rjags)
import(stats)
