.. GenomeVIP documentation master file, created by
   sphinx-quickstart.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.


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GenomeVIP
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Welcome to the Genome Variant Investigation Plaform ("GenomeVIP") on Read the Docs.


GenomeVIP is a web platform for performing variant discovery and annotation on Amazon's Web
Service (AWS) cloud or on local high-performance computing clusters.

Here you will find a user guide (work in progress) for GenomeVIP as well as some notes for building
GenomeVIP from source.


Have feedback or comments? Please file an issue here_.

.. _here: https://github.com/ding-lab/GenomeVIP/issues


Contents
########

.. toctree::
   :maxdepth: 3

   Quick Start <sections/startup>
   General Usage <sections/usage>
   Customized Usage <sections/custom>
   Build GenomeVIP <sections/build>
   Extend GenomeVIP <sections/extend>
   How to Cite <sections/cite>
   Further Information <sections/info>
