bedfile = input/trimmed_4kb_pixelmap.bed
countsfiles = input/JBR2_ES1_S3_GH_5C_12_11_2015_16kb_4kb_obs_over_exp_int_scores_diag_cluster_trimmed.counts,input/JBR2_ES2_S2_GH_5C_12_11_2015_16kb_4kb_obs_over_exp_int_scores_diag_cluster_trimmed.counts,input/pNPC1_S4_10_24_2015_16kb_4kb_obs_over_exp_int_scores_diag_cluster_trimmed.counts,input/pNPC2_S3_10_24_2015_16kb_4kb_obs_over_exp_int_scores_diag_cluster_trimmed.counts,input/v652i1_S2_10_24_2015_16kb_4kb_obs_over_exp_int_scores_diag_cluster_trimmed.counts,input/v652i2_S1_10_24_2015_16kb_4kb_obs_over_exp_int_scores_diag_cluster_trimmed.counts
