broad.pda.seq.segmentation.ReadCountNormalizer Interface Reference

Inheritance diagram for broad.pda.seq.segmentation.ReadCountNormalizer:

Public Member Functions
double	normalize (double count)

Detailed Description

Implements a strategy for read count normalization, so that counts estimated from a given alignment can be compared to counts estimated in a different alignment.

Author

mgarber

Member Function Documentation

double broad.pda.seq.segmentation.ReadCountNormalizer.normalize

(

double

count

)

Normalizes a given read count

Parameters

count

– raw count estimated from this data model or alignment

Returns

normalized count

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The documentation for this interface was generated from the following file:

• java/broad/pda/seq/segmentation/ReadCountNormalizer.java